Citrus Sinensis ID: 017914
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 364 | 2.2.26 [Sep-21-2011] | |||||||
| P0AD12 | 274 | Protein YeeZ OS=Escherich | N/A | no | 0.703 | 0.934 | 0.261 | 6e-09 | |
| P0AD13 | 274 | Protein YeeZ OS=Escherich | N/A | no | 0.703 | 0.934 | 0.261 | 6e-09 |
| >sp|P0AD12|YEEZ_ECOLI Protein YeeZ OS=Escherichia coli (strain K12) GN=yeeZ PE=1 SV=1 | Back alignment and function desciption |
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Score = 62.0 bits (149), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 76/291 (26%), Positives = 122/291 (41%), Gaps = 35/291 (12%)
Query: 61 RMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETAL---MI 117
++ I+G+G++G A + +GW V+G+ T + SG D +L +
Sbjct: 3 KVAIVGLGWLGMPLAMSLSARGWQVTGSKTTQDGVEAARMSGIDSYLLRMEPELVCDSDD 62
Query: 118 LTTLKNYTHLLVSIPPLE-GTGDPMLKHG--ELLRSTLMNGHLQWLGYLSSTGVYGHSGG 174
L L + L++++P G GD EL+ S L + + + + SST VYG + G
Sbjct: 63 LDALMDADALVITLPARRSGPGDEFYLQAVQELVDSALAH-RIPRIIFTSSTSVYGDAQG 121
Query: 175 AWVDEDYPANPTTELGRLRLSAEKGWL-NLGRDLGISAQVFRLGGIYGPGRSSVDTIIKQ 233
V E P NP T GR+ L + WL NL G S + RL G+ GPGR
Sbjct: 122 T-VKETTPRNPVTNSGRV-LEELEDWLHNLP---GTSVDILRLAGLVGPGRHPGR----- 171
Query: 234 LPLSEGQKMRRARQYTSRIHVDDICQVLSASIDKPSAWNVYNVVDDDPA-PREEVFAYAW 292
G+ + +H++D+ ++ + P ++YN+ PA P VF
Sbjct: 172 --FFAGKTAPDGEHGVNLVHLEDVIGAITLLLQAPKGGHIYNIC--APAHPARNVFY--- 224
Query: 293 DLVEKKWPGLLKHRKPRENTESSNEKGSSRGEKRVSNVRMKKELGVRLWHP 343
+ LL P+ + KG K + R+ ELG +P
Sbjct: 225 ----PQMARLLGLEPPQFRNSLDSGKG-----KIIDGSRICNELGFEYQYP 266
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Escherichia coli (strain K12) (taxid: 83333) |
| >sp|P0AD13|YEEZ_ECO57 Protein YeeZ OS=Escherichia coli O157:H7 GN=yeeZ PE=4 SV=1 | Back alignment and function description |
|---|
Score = 62.0 bits (149), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 76/291 (26%), Positives = 122/291 (41%), Gaps = 35/291 (12%)
Query: 61 RMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETAL---MI 117
++ I+G+G++G A + +GW V+G+ T + SG D +L +
Sbjct: 3 KVAIVGLGWLGMPLAMSLSARGWQVTGSKTTQDGVEAARMSGIDSYLLRMEPELVCDSDD 62
Query: 118 LTTLKNYTHLLVSIPPLE-GTGDPMLKHG--ELLRSTLMNGHLQWLGYLSSTGVYGHSGG 174
L L + L++++P G GD EL+ S L + + + + SST VYG + G
Sbjct: 63 LDALMDADALVITLPARRSGPGDEFYLQAVQELVDSALAH-RIPRIIFTSSTSVYGDAQG 121
Query: 175 AWVDEDYPANPTTELGRLRLSAEKGWL-NLGRDLGISAQVFRLGGIYGPGRSSVDTIIKQ 233
V E P NP T GR+ L + WL NL G S + RL G+ GPGR
Sbjct: 122 T-VKETTPRNPVTNSGRV-LEELEDWLHNLP---GTSVDILRLAGLVGPGRHPGR----- 171
Query: 234 LPLSEGQKMRRARQYTSRIHVDDICQVLSASIDKPSAWNVYNVVDDDPA-PREEVFAYAW 292
G+ + +H++D+ ++ + P ++YN+ PA P VF
Sbjct: 172 --FFAGKTAPDGEHGVNLVHLEDVIGAITLLLQAPKGGHIYNIC--APAHPARNVFY--- 224
Query: 293 DLVEKKWPGLLKHRKPRENTESSNEKGSSRGEKRVSNVRMKKELGVRLWHP 343
+ LL P+ + KG K + R+ ELG +P
Sbjct: 225 ----PQMARLLGLEPPQFRNSLDSGKG-----KIIDGSRICNELGFEYQYP 266
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Escherichia coli O157:H7 (taxid: 83334) |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 364 | ||||||
| 224062087 | 362 | predicted protein [Populus trichocarpa] | 0.980 | 0.986 | 0.612 | 1e-124 | |
| 255538746 | 343 | NAD dependent epimerase/dehydratase, put | 0.936 | 0.994 | 0.588 | 1e-115 | |
| 225458177 | 351 | PREDICTED: protein yeeZ [Vitis vinifera] | 0.936 | 0.971 | 0.565 | 1e-114 | |
| 147797330 | 351 | hypothetical protein VITISV_043063 [Viti | 0.936 | 0.971 | 0.565 | 1e-114 | |
| 356564308 | 333 | PREDICTED: protein yeeZ-like [Glycine ma | 0.821 | 0.897 | 0.633 | 1e-107 | |
| 297850360 | 353 | predicted protein [Arabidopsis lyrata su | 0.868 | 0.895 | 0.581 | 1e-103 | |
| 356553857 | 330 | PREDICTED: LOW QUALITY PROTEIN: protein | 0.813 | 0.896 | 0.623 | 1e-103 | |
| 18394775 | 352 | nucleoside-diphosphate-sugar epimerase d | 0.961 | 0.994 | 0.524 | 1e-103 | |
| 21536800 | 352 | unknown [Arabidopsis thaliana] | 0.961 | 0.994 | 0.522 | 1e-101 | |
| 449515748 | 357 | PREDICTED: protein YeeZ-like [Cucumis sa | 0.857 | 0.873 | 0.596 | 1e-100 |
| >gi|224062087|ref|XP_002300748.1| predicted protein [Populus trichocarpa] gi|222842474|gb|EEE80021.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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Score = 451 bits (1160), Expect = e-124, Method: Compositional matrix adjust.
Identities = 223/364 (61%), Positives = 272/364 (74%), Gaps = 7/364 (1%)
Query: 1 MEICQLSGGFATLPFQSTHVPSPITNVSSKDGTPTFIRCSTIRAAVNLSYSEKSEWQSPN 60
MEI Q+ A P Q+ PS + T TF+ + + S ++KSE +S N
Sbjct: 6 MEIYQVKIP-ARFPLQAGCFPS------NSKKTSTFLPRVAAFSTSSHSLTDKSESESQN 58
Query: 61 RMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETALMILTT 120
RM ILGMGFV + FA+ ++ +GWVV+GTCT+ KKK LE+ GF VHL +AN+ L L
Sbjct: 59 RMFILGMGFVCQFFAQSLQKEGWVVTGTCTSKTKKKHLEEKGFHVHLLDANQPELSTLNA 118
Query: 121 LKNYTHLLVSIPPLEGTGDPMLKHGELLRSTLMNGHLQWLGYLSSTGVYGHSGGAWVDED 180
LK YTHLLVSIPP+ GDPML+H ELLRSTL++G+LQWL YLSST VYGH GAWVDED
Sbjct: 119 LKCYTHLLVSIPPVGCAGDPMLQHEELLRSTLLDGNLQWLCYLSSTSVYGHCDGAWVDED 178
Query: 181 YPANPTTELGRLRLSAEKGWLNLGRDLGISAQVFRLGGIYGPGRSSVDTIIKQLPLSEGQ 240
YP +PT+EL +LRL AE+GWLNLG+ LG S QVFRLGGIYGPGRS+VDTIIKQ P SEGQ
Sbjct: 179 YPTSPTSELAKLRLDAEEGWLNLGQSLGFSTQVFRLGGIYGPGRSAVDTIIKQEPQSEGQ 238
Query: 241 KMRRARQYTSRIHVDDICQVLSASIDKPSAWNVYNVVDDDPAPREEVFAYAWDLVEKKWP 300
KMR++RQYTSR+HV+DICQ L ASI PS+ +YN+VDDDPAPREEVF YA DL++KKWP
Sbjct: 239 KMRKSRQYTSRVHVEDICQALKASIYTPSSRGIYNIVDDDPAPREEVFTYAEDLIKKKWP 298
Query: 301 GLLKHRKPRENTESSNEKGSSRGEKRVSNVRMKKELGVRLWHPSYKSGLQSIINQMDQPY 360
G K + S +K +SRG+KRVSN+RMK+ELGVRL HPSY+SGL SII+QM+ P+
Sbjct: 299 GHTKWSSNSASAASPTKKDNSRGDKRVSNMRMKRELGVRLLHPSYRSGLLSIIDQMENPF 358
Query: 361 QCSP 364
CSP
Sbjct: 359 HCSP 362
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Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255538746|ref|XP_002510438.1| NAD dependent epimerase/dehydratase, putative [Ricinus communis] gi|223551139|gb|EEF52625.1| NAD dependent epimerase/dehydratase, putative [Ricinus communis] | Back alignment and taxonomy information |
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Score = 419 bits (1078), Expect = e-115, Method: Compositional matrix adjust.
Identities = 212/360 (58%), Positives = 268/360 (74%), Gaps = 19/360 (5%)
Query: 1 MEICQLSGGFATLPFQST-HVPSPITNVSSKDGTPTFIRCSTIRAAVNLSYSEKSEWQSP 59
MEI Q+ A+ P + H P ++ TF+ S I + S ++K E +S
Sbjct: 1 MEIYQIP---ASYPLREVRHFP--------RNYMSTFLPISAISSH---SKTDKIELESR 46
Query: 60 NRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETALMILT 119
NRM ILGMGF+G+ FA+ +KN+GWVV+GT T+ +KK++L++ GFD+ LF+ANE L
Sbjct: 47 NRMFILGMGFIGQFFAQNLKNEGWVVTGTSTSTIKKEQLQERGFDICLFDANEPQFSTLN 106
Query: 120 TLKNYTHLLVSIPPLEGTGDPMLKHGELLRSTLMNGHLQWLGYLSSTGVYGHSGGAWVDE 179
LK+YTHLLVSIP + G GDP+L+H ELLRS+LM+G+LQWLGYLSST VYG GGAWVDE
Sbjct: 107 RLKHYTHLLVSIPSVVGIGDPVLQHRELLRSSLMDGNLQWLGYLSSTSVYGDCGGAWVDE 166
Query: 180 DYPANPTTELGRLRLSAEKGWLNLGRDLGISAQVFRLGGIYGPGRSSVDTIIKQLPLSEG 239
+YP NPT+E+ + RL+AE+GWLNLG L +S QVFRLGGIYGPGRS+VDTI KQ P+S+
Sbjct: 167 NYPPNPTSEVAKSRLAAEEGWLNLGITLELSTQVFRLGGIYGPGRSAVDTITKQEPISKS 226
Query: 240 QKMRRARQYTSRIHVDDICQVLSASIDKPSAWNVYNVVDDDPAPREEVFAYAWDLVEKKW 299
QKMR ++QYTSR+HV+DICQ L ASI KPS +YN+VDDDPAPREEVFAYA DLV +KW
Sbjct: 227 QKMRISKQYTSRVHVEDICQALKASIYKPSFGRIYNIVDDDPAPREEVFAYAEDLVGRKW 286
Query: 300 PGLLKHRKPRENTESSNEKGSSRGEKRVSNVRMKKELGVRLWHPSYKSGLQSIINQMDQP 359
PG +K E S N+ RGEKRVSN R+K+ELGVRL +PSY+SGL SII+QM+ P
Sbjct: 287 PGWVKESTSSEKALSYNK----RGEKRVSNGRLKRELGVRLLYPSYRSGLLSIIDQMENP 342
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Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225458177|ref|XP_002281172.1| PREDICTED: protein yeeZ [Vitis vinifera] gi|302142549|emb|CBI19752.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
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Score = 418 bits (1074), Expect = e-114, Method: Compositional matrix adjust.
Identities = 207/366 (56%), Positives = 259/366 (70%), Gaps = 25/366 (6%)
Query: 1 MEICQLSGGFATLPFQ-------STHVPSPITNVSSKDGTPTFIRCSTIRAAVNLSYSEK 53
M +CQLS F P Q S H+P + + S + +RCST E
Sbjct: 1 MVMCQLSCQFLATPLQVGKSLPTSLHLPRFLKSESFPGASTGVLRCST----------ET 50
Query: 54 SEWQSPNRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANET 113
+S NRM ILGMGFVG+ FA+ +KN GWVVSGTCT+ KKK+LE+ GF+++LF+ANE
Sbjct: 51 EVSESRNRMFILGMGFVGQFFAQDLKNHGWVVSGTCTSAFKKKKLEERGFNIYLFDANEP 110
Query: 114 ALMILTTLKNYTHLLVSIPPLEGTGDPMLKHGELLRSTLMNGHLQWLGYLSSTGVYGHSG 173
L +L LK THLLVSIPP+ G GDP+L+H + L+S +M+G LQWL YLSST VYG+ G
Sbjct: 111 ELGVLNALKYSTHLLVSIPPVVGIGDPILQHDKFLKSRIMDGDLQWLCYLSSTSVYGNCG 170
Query: 174 GAWVDEDYPANPTTELGRLRLSAEKGWLNLGRDLGISAQVFRLGGIYGPGRSSVDTIIKQ 233
G VDEDYPA+P +E +LRL+AEKGW +LG +LG+S Q+FRLGGIYGPGRS+VDTIIKQ
Sbjct: 171 GELVDEDYPASPASESAKLRLAAEKGWSSLGSELGLSTQIFRLGGIYGPGRSAVDTIIKQ 230
Query: 234 LPLSEGQKMRRARQYTSRIHVDDICQVLSASIDKPSAWNVYNVVDDDPAPREEVFAYAWD 293
PL+EGQ+ R +RQYTSR+HV DICQ L A+I PS +YN+VDDDPAPR +VFA+A D
Sbjct: 231 GPLTEGQRKRISRQYTSRVHVADICQALKATIQIPSVGKIYNIVDDDPAPRAQVFAFARD 290
Query: 294 LVEKKWPGLLKHRKPRENTESSNEKGSSRGEKRVSNVRMKKELGVRLWHPSYKSGLQSII 353
L+EKKWP +K ES + + EKRVSN RMKKELGV L HP+Y+SGLQSII
Sbjct: 291 LIEKKWPNHIK--------ESVFPGSARQAEKRVSNARMKKELGVTLLHPTYRSGLQSII 342
Query: 354 NQMDQP 359
+ M+ P
Sbjct: 343 DNMENP 348
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Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|147797330|emb|CAN76003.1| hypothetical protein VITISV_043063 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 417 bits (1072), Expect = e-114, Method: Compositional matrix adjust.
Identities = 207/366 (56%), Positives = 258/366 (70%), Gaps = 25/366 (6%)
Query: 1 MEICQLSGGFATLPFQ-------STHVPSPITNVSSKDGTPTFIRCSTIRAAVNLSYSEK 53
M +CQLS F P Q S H+P + + S + +RCST E
Sbjct: 1 MVMCQLSCQFLATPLQVGKSLPTSLHLPRFLKSESFPGASTGVLRCST----------ET 50
Query: 54 SEWQSPNRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANET 113
+S NRM ILGMGFVG+ FA+ +KN GWVVSGTCT+ KKK+LE+ GF+++LF+ANE
Sbjct: 51 EVSESRNRMFILGMGFVGQFFAQDLKNHGWVVSGTCTSAFKKKKLEERGFNIYLFDANEP 110
Query: 114 ALMILTTLKNYTHLLVSIPPLEGTGDPMLKHGELLRSTLMNGHLQWLGYLSSTGVYGHSG 173
L +L LK THLLVSIPP+ G GDP+L+H + L+S +M+G LQWL YLSST VYG+ G
Sbjct: 111 ELGVLNALKYSTHLLVSIPPVVGIGDPILQHDKFLKSRIMDGDLQWLCYLSSTSVYGNCG 170
Query: 174 GAWVDEDYPANPTTELGRLRLSAEKGWLNLGRDLGISAQVFRLGGIYGPGRSSVDTIIKQ 233
G VDEDYPA+P +E +LRL+AEKGW +LG +LG+S Q+FRLGGIYGPGRS+VDTIIKQ
Sbjct: 171 GELVDEDYPASPASESAKLRLAAEKGWSSLGSELGLSTQIFRLGGIYGPGRSAVDTIIKQ 230
Query: 234 LPLSEGQKMRRARQYTSRIHVDDICQVLSASIDKPSAWNVYNVVDDDPAPREEVFAYAWD 293
PL+EGQ+ R +RQYTSR+HV DICQ L A+I PS +YN+VDDDPAPR +VFA+A D
Sbjct: 231 GPLTEGQRKRISRQYTSRVHVADICQALKATIQIPSVGKIYNIVDDDPAPRAQVFAFARD 290
Query: 294 LVEKKWPGLLKHRKPRENTESSNEKGSSRGEKRVSNVRMKKELGVRLWHPSYKSGLQSII 353
L+EKKWP +K ES + + EKRVSN RMKKELGV L HP+Y+SGLQSII
Sbjct: 291 LIEKKWPNHIK--------ESVFPGSARQAEKRVSNARMKKELGVTLLHPTYRSGLQSII 342
Query: 354 NQMDQP 359
+ M P
Sbjct: 343 DNMXNP 348
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Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356564308|ref|XP_003550397.1| PREDICTED: protein yeeZ-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 190/300 (63%), Positives = 231/300 (77%), Gaps = 1/300 (0%)
Query: 62 MLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETALMILTTL 121
M ILGMGF G+ A K+ NQGWVVSGTCT +KKKEL++ GF+VHLF+AN + +L +
Sbjct: 33 MFILGMGFFGQSLARKLHNQGWVVSGTCTTHVKKKELQEMGFNVHLFDANHPDVDVLQVM 92
Query: 122 KNYTHLLVSIPPLEGTGDPMLKHGELLRSTLMNGHLQWLGYLSSTGVYGHSGGAWVDEDY 181
KNY+H+LVS+PPL G GDPML+H ELLRS+L +G L+WL YLSST VYG G VDEDY
Sbjct: 93 KNYSHILVSVPPLVGIGDPMLRHEELLRSSLTDGDLRWLCYLSSTSVYGDCDGELVDEDY 152
Query: 182 PANPTTELGRLRLSAEKGWLNLGRDLGISAQVFRLGGIYGPGRSSVDTIIKQLPLSEGQK 241
P NP + L +LRL++E+GW NL +LGIS +FRLGGIYGPGRS+VDTIIKQ P+SEGQK
Sbjct: 153 PTNPESGLAKLRLASEEGWSNLAHNLGISPLLFRLGGIYGPGRSAVDTIIKQKPMSEGQK 212
Query: 242 MRRARQYTSRIHVDDICQVLSASIDKPSAWNVYNVVDDDPAPREEVFAYAWDLVEKKWPG 301
R+ R+YTSRIHVDDICQ L A++ P VYN+VDDDPAPREEVF YA LVEKKWPG
Sbjct: 213 RRKNRKYTSRIHVDDICQALMATVLAPPPREVYNIVDDDPAPREEVFEYAMKLVEKKWPG 272
Query: 302 LLKHRKPRENTESSNEKGSSRGEKRVSNVRMKKELGVRLWHPSYKSGLQSIINQMDQPYQ 361
L ++ E N K + RGEKRV N RMK+ELGV+L +P YKSGL+SII+Q+ P+Q
Sbjct: 273 LKLQSVEQKQKEWPNAK-NPRGEKRVCNARMKRELGVQLLYPDYKSGLKSIIHQIQTPFQ 331
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Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297850360|ref|XP_002893061.1| predicted protein [Arabidopsis lyrata subsp. lyrata] gi|297338903|gb|EFH69320.1| predicted protein [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 185/318 (58%), Positives = 243/318 (76%), Gaps = 2/318 (0%)
Query: 44 AAVNLSYSEKSEWQSPNRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGF 103
+A+ S S + +S NRM ILGMGFVG FA+++K WVVSGTC + KKKE E+ G
Sbjct: 37 SAIGDSQSVAPDSESRNRMFILGMGFVGGFFAQQLKEANWVVSGTCRSDPKKKEWEKRGI 96
Query: 104 DVHLFNANETAL-MILTTLKNYTHLLVSIPPLEGTGDPMLKHGELLRSTLMNGHLQWLGY 162
++H F+A+ ++L ++K+YTHLL+SIPPL GDPML++ ELLR L +G+L+WL Y
Sbjct: 97 NLHPFSADSPEWSLLLDSVKDYTHLLISIPPLADIGDPMLRNVELLRGKLSSGNLRWLCY 156
Query: 163 LSSTGVYGHSGGAWVDEDYPANPTTELGRLRLSAEKGWLNLGRDLGISAQVFRLGGIYGP 222
LSST VYG GGAWVDE++P NP T+ ++RL+AE+GWL+LGRDLG+S Q+ RLGGIYGP
Sbjct: 157 LSSTSVYGDCGGAWVDENHPPNPKTQSAKVRLAAEEGWLSLGRDLGVSTQILRLGGIYGP 216
Query: 223 GRSSVDTIIKQLPLSEGQKMRRARQYTSRIHVDDICQVLSASIDKPSAWNVYNVVDDDPA 282
GRS++DT++KQ LSEGQK R +R++TSR+HV+DICQVL AS +KPS+ +YNVVDDDPA
Sbjct: 217 GRSAIDTLLKQERLSEGQKRRASRKFTSRVHVEDICQVLQASTEKPSSGEIYNVVDDDPA 276
Query: 283 PREEVFAYAWDLVEKKWPGLLKHRKPRENTESSNEKGSSRGEKRVSNVRMKKELGVRLWH 342
PREEVF YA +L+ K+WP ++ + KP S E+ S RGEKRV N MK +LGV+L +
Sbjct: 277 PREEVFEYALELIAKRWPEII-NTKPFPFLYESREESSLRGEKRVRNEHMKNKLGVKLIY 335
Query: 343 PSYKSGLQSIINQMDQPY 360
PSYKSGLQSI+ MD P+
Sbjct: 336 PSYKSGLQSIVENMDNPF 353
|
Source: Arabidopsis lyrata subsp. lyrata Species: Arabidopsis lyrata Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356553857|ref|XP_003545267.1| PREDICTED: LOW QUALITY PROTEIN: protein yeeZ-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 380 bits (977), Expect = e-103, Method: Compositional matrix adjust.
Identities = 187/300 (62%), Positives = 227/300 (75%), Gaps = 4/300 (1%)
Query: 62 MLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETALMILTTL 121
M ILGMGF+G+ A K+ NQGWVVSGTCT +KKK+L+ GF VHLF+AN + +L L
Sbjct: 33 MFILGMGFMGQSLARKLHNQGWVVSGTCTAHVKKKQLQDMGFHVHLFDANHPDVDVLQVL 92
Query: 122 KNYTHLLVSIPPLEGTGDPMLKHGELLRSTLMNGHLQWLGYLSSTGVYGHSGGAWVDEDY 181
KNYTH+LVS+PPL G GDP L+H ELLRS++++G L+WL YLSST VYG G VDEDY
Sbjct: 93 KNYTHILVSVPPLVGIGDPTLRHEELLRSSMIDGDLRWLCYLSSTSVYGDCDGELVDEDY 152
Query: 182 PANPTTELGRLRLSAEKGWLNLGRDLGISAQVFRLGGIYGPGRSSVDTIIKQLPLSEGQK 241
P NP +E +LRL++E+GW NL +LGIS +FRLGGIYGPGRS+VDTIIKQ P+SEGQK
Sbjct: 153 PTNPKSESAKLRLASEEGWSNLAHNLGISLLLFRLGGIYGPGRSAVDTIIKQKPMSEGQK 212
Query: 242 MRRARQYTSRIHVDDICQVLSASIDKPSAWNVYNVVDDDPAPREEVFAYAWDLVEKKWPG 301
R+ R+YTSRIHVDDICQ L A++ P VYN+VDDDPAPREEVF YA LVEKKWPG
Sbjct: 213 RRKNRKYTSRIHVDDICQALMATVLAPPPREVYNIVDDDPAPREEVFEYATRLVEKKWPG 272
Query: 302 LLKHRKPRENTESSNEKGSSRGEKRVSNVRMKKELGVRLWHPSYKSGLQSIINQMDQPYQ 361
L + E SN K + RGEKR+ N RMK+ELGV+L YKSGL+SII+Q+ P+
Sbjct: 273 LKLQSVEQRQKEWSNVK-NPRGEKRLCNARMKRELGVQL---XYKSGLKSIIHQIQTPFH 328
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|18394775|ref|NP_564095.1| nucleoside-diphosphate-sugar epimerase domain-containing protein [Arabidopsis thaliana] gi|109946403|gb|ABG48380.1| At1g19690 [Arabidopsis thaliana] gi|332191762|gb|AEE29883.1| nucleoside-diphosphate-sugar epimerase domain-containing protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 380 bits (975), Expect = e-103, Method: Compositional matrix adjust.
Identities = 190/362 (52%), Positives = 256/362 (70%), Gaps = 12/362 (3%)
Query: 1 MEICQLSGGFATLPFQSTHVPSPITNVSSKDGTPTFIRCSTIR--AAVNLSYSEKSEWQS 58
M + QL +PF+ T P +N R + R +A + S S + +S
Sbjct: 1 MAVFQLPSLSPEIPFRFTPTPLKFSNRR---------RINFFRPLSATDDSRSGAPDPES 51
Query: 59 PNRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETALMIL 118
PN+M ILGMGFVG FA+++K WVVSGTC + KKKE E+ G ++H F+A+ +L
Sbjct: 52 PNQMFILGMGFVGGFFAQQLKESDWVVSGTCRSDSKKKEWEKRGINLHPFSADSPEWSLL 111
Query: 119 TTLKNYTHLLVSIPPLEGTGDPMLKHGELLRSTLMNGHLQWLGYLSSTGVYGHSGGAWVD 178
++K+YTHLL+SIPPL GDPML++ EL+R L +G+L+WL YLSST VYG GGAWV+
Sbjct: 112 DSVKDYTHLLISIPPLADIGDPMLRNVELVRDKLSSGNLRWLCYLSSTSVYGDCGGAWVN 171
Query: 179 EDYPANPTTELGRLRLSAEKGWLNLGRDLGISAQVFRLGGIYGPGRSSVDTIIKQLPLSE 238
E++ NP T+ ++RL+AE+GWL+LGRDLG+S Q+ RLGGIYGPGRS++DT++KQ LSE
Sbjct: 172 ENHLPNPKTQSAKVRLAAEQGWLSLGRDLGVSTQILRLGGIYGPGRSAIDTLLKQERLSE 231
Query: 239 GQKMRRARQYTSRIHVDDICQVLSASIDKPSAWNVYNVVDDDPAPREEVFAYAWDLVEKK 298
GQK R +R++TSR+HV+DICQVL A+ +KP++ +YN+VDDDPA REEVF YA +L+EK+
Sbjct: 232 GQKRRASRKFTSRVHVEDICQVLKAATEKPASGEIYNIVDDDPAAREEVFEYALELIEKR 291
Query: 299 WPGLLKHRKPRENTESSNEKGSSRGEKRVSNVRMKKELGVRLWHPSYKSGLQSIINQMDQ 358
WPG + KP S E+ S RGEKRV N RMK +LGV+L +PSYKSGLQSI+ MD
Sbjct: 292 WPGNITT-KPFPFLYESREESSLRGEKRVCNERMKDKLGVKLLYPSYKSGLQSIVENMDN 350
Query: 359 PY 360
+
Sbjct: 351 RF 352
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|21536800|gb|AAM61132.1| unknown [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 189/362 (52%), Positives = 255/362 (70%), Gaps = 12/362 (3%)
Query: 1 MEICQLSGGFATLPFQSTHVPSPITNVSSKDGTPTFIRCSTIR--AAVNLSYSEKSEWQS 58
M + QL +PF+ T P +N R + R +A + S S + +S
Sbjct: 1 MAVFQLPSLSPEIPFRFTPTPLKFSNRR---------RINFFRPLSATDDSRSGAPDPES 51
Query: 59 PNRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETALMIL 118
PN+M ILGMGFVG FA+++K WVVSGTC + KKKE E+ G ++H F+A+ +L
Sbjct: 52 PNQMFILGMGFVGGFFAQQLKESDWVVSGTCRSDSKKKEWEKRGINLHPFSADSPEWSLL 111
Query: 119 TTLKNYTHLLVSIPPLEGTGDPMLKHGELLRSTLMNGHLQWLGYLSSTGVYGHSGGAWVD 178
++K+YTHLL+SIPPL GDPML++ EL+R L +G+L+WL YLSST VYG GGAWV+
Sbjct: 112 DSVKDYTHLLISIPPLADIGDPMLRNVELVRDKLSSGNLRWLCYLSSTSVYGDCGGAWVN 171
Query: 179 EDYPANPTTELGRLRLSAEKGWLNLGRDLGISAQVFRLGGIYGPGRSSVDTIIKQLPLSE 238
E++ NP T+ ++RL+AE+GWL+LGRDLG+S Q+ RLGGIYGPGRS++DT++KQ LSE
Sbjct: 172 ENHLPNPKTQSAKVRLAAEQGWLSLGRDLGVSTQILRLGGIYGPGRSAIDTLLKQERLSE 231
Query: 239 GQKMRRARQYTSRIHVDDICQVLSASIDKPSAWNVYNVVDDDPAPREEVFAYAWDLVEKK 298
GQK R +R++TSR+HV+DICQVL A+ +KP++ +YN+VDDDPA REEVF YA +L+EK+
Sbjct: 232 GQKRRASRKFTSRVHVEDICQVLKAATEKPASGEIYNIVDDDPAAREEVFEYALELIEKR 291
Query: 299 WPGLLKHRKPRENTESSNEKGSSRGEKRVSNVRMKKELGVRLWHPSYKSGLQSIINQMDQ 358
WPG + KP S E+ S RGEKRV N RMK +LGV+L +P YKSGLQSI+ MD
Sbjct: 292 WPGNITT-KPFPFLYESREESSLRGEKRVCNERMKDKLGVKLLYPWYKSGLQSIVENMDN 350
Query: 359 PY 360
+
Sbjct: 351 RF 352
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449515748|ref|XP_004164910.1| PREDICTED: protein YeeZ-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 189/317 (59%), Positives = 236/317 (74%), Gaps = 5/317 (1%)
Query: 43 RAAVNLSYSEK--SEWQSPNRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQ 100
RA +N S E S + NRM ILGMGFVG+ FA+++K GW VSGTC N+ +K +LE
Sbjct: 37 RAVMNSSNPESKPSPLKIQNRMFILGMGFVGQFFAQELKYSGWAVSGTCRNLGQKMQLEG 96
Query: 101 SGFDVHLFNANETALMILTTLKNYTHLLVSIPPLEGTGDPMLKHGELLRSTLMNGHLQWL 160
GFDV++F+AN+ L +K +THLL+SIPP GDP+L H +LLR+TL G L+WL
Sbjct: 97 RGFDVYVFDANDPVQDTLKAMKYHTHLLISIPPDVDVGDPLLHHEKLLRTTLQGGDLRWL 156
Query: 161 GYLSSTGVYGHSGGAWVDEDYPANPTTELGRLRLSAEKGWLNLGRDLGISAQVFRLGGIY 220
YLSST VYG GGAWVDED P NP ++ G+LR+ AE+ W+NLG DLG+S QVFRLGGIY
Sbjct: 157 CYLSSTSVYGDYGGAWVDEDNPTNPLSQSGKLRIEAEERWINLGNDLGLSTQVFRLGGIY 216
Query: 221 GPGRSSVDTIIKQLPLSEGQKMRRARQYTSRIHVDDICQVLSASIDKPSAWNVYNVVDDD 280
GPGRS++DTIIKQ LSE Q+ R RQ+TSR+HV DICQ L A I +PS+ +YN+VDDD
Sbjct: 217 GPGRSAIDTIIKQRSLSERQQRRARRQFTSRVHVQDICQALKACIQRPSSRRLYNIVDDD 276
Query: 281 PAPREEVFAYAWDLVEKKWPGLLKH-RKPRENTESSNEKGSSRGEKRVSNVRMKKELGVR 339
PAPREEVF+YA DLVEKKWPG K E ++ +N +G RG+KRV N RMK+ELGV
Sbjct: 277 PAPREEVFSYARDLVEKKWPGKFDTLSKVVEESDITNGRG--RGDKRVCNARMKRELGVS 334
Query: 340 LWHPSYKSGLQSIINQM 356
L +P+YKSGLQSI++QM
Sbjct: 335 LVYPTYKSGLQSILDQM 351
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 364 | ||||||
| TAIR|locus:2035461 | 352 | AT1G19690 [Arabidopsis thalian | 0.953 | 0.985 | 0.537 | 5.2e-97 | |
| UNIPROTKB|Q5LM08 | 283 | SPO3755 "Uncharacterized prote | 0.747 | 0.961 | 0.376 | 2.8e-41 | |
| TIGR_CMR|SPO_3755 | 283 | SPO_3755 "conserved hypothetic | 0.747 | 0.961 | 0.376 | 2.8e-41 | |
| UNIPROTKB|Q2GHG5 | 272 | ECH_0297 "Putative uncharacter | 0.719 | 0.963 | 0.360 | 3.5e-36 | |
| TIGR_CMR|ECH_0297 | 272 | ECH_0297 "conserved hypothetic | 0.719 | 0.963 | 0.360 | 3.5e-36 | |
| UNIPROTKB|Q60BD7 | 313 | MCA0540 "Putative uncharacteri | 0.804 | 0.936 | 0.307 | 2.5e-26 | |
| UNIPROTKB|Q0BXW2 | 287 | HNE_3004 "Putative uncharacter | 0.571 | 0.724 | 0.366 | 1.2e-24 | |
| UNIPROTKB|Q749U5 | 289 | GSU2647 "NAD-dependent nucleos | 0.785 | 0.989 | 0.245 | 1.9e-18 | |
| TIGR_CMR|GSU_2647 | 289 | GSU_2647 "conserved hypothetic | 0.785 | 0.989 | 0.245 | 1.9e-18 | |
| UNIPROTKB|Q88BE7 | 282 | PSPTO_0070 "Uncharacterized pr | 0.590 | 0.762 | 0.331 | 7e-18 |
| TAIR|locus:2035461 AT1G19690 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 964 (344.4 bits), Expect = 5.2e-97, P = 5.2e-97
Identities = 187/348 (53%), Positives = 249/348 (71%)
Query: 13 LPFQSTHVPSPITNVSSKDGTPTFIRCSTIRAAVNLSYSEKSEWQSPNRMLILGMGFVGR 72
LP S +P T K I +A + S S + +SPN+M ILGMGFVG
Sbjct: 6 LPSLSPEIPFRFTPTPLKFSNRRRINFFRPLSATDDSRSGAPDPESPNQMFILGMGFVGG 65
Query: 73 IFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETALMILTTLKNYTHLLVSIP 132
FA+++K WVVSGTC + KKKE E+ G ++H F+A+ +L ++K+YTHLL+SIP
Sbjct: 66 FFAQQLKESDWVVSGTCRSDSKKKEWEKRGINLHPFSADSPEWSLLDSVKDYTHLLISIP 125
Query: 133 PLEGTGDPMLKHGELLRSTLMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANPTTELGRL 192
PL GDPML++ EL+R L +G+L+WL YLSST VYG GGAWV+E++ NP T+ ++
Sbjct: 126 PLADIGDPMLRNVELVRDKLSSGNLRWLCYLSSTSVYGDCGGAWVNENHLPNPKTQSAKV 185
Query: 193 RLSAEKGWLNLGRDLGISAQVFRLGGIYGPGRSSVDTIIKQLPLSEGQKMRRARQYTSRI 252
RL+AE+GWL+LGRDLG+S Q+ RLGGIYGPGRS++DT++KQ LSEGQK R +R++TSR+
Sbjct: 186 RLAAEQGWLSLGRDLGVSTQILRLGGIYGPGRSAIDTLLKQERLSEGQKRRASRKFTSRV 245
Query: 253 HVDDICQVLSASIDKPSAWNVYNVVDDDPAPREEVFAYAWDLVEKKWPGLLKHRKPRENT 312
HV+DICQVL A+ +KP++ +YN+VDDDPA REEVF YA +L+EK+WPG + KP
Sbjct: 246 HVEDICQVLKAATEKPASGEIYNIVDDDPAAREEVFEYALELIEKRWPGNIT-TKPFPFL 304
Query: 313 ESSNEKGSSRGEKRVSNVRMKKELGVRLWHPSYKSGLQSIINQMDQPY 360
S E+ S RGEKRV N RMK +LGV+L +PSYKSGLQSI+ MD +
Sbjct: 305 YESREESSLRGEKRVCNERMKDKLGVKLLYPSYKSGLQSIVENMDNRF 352
|
|
| UNIPROTKB|Q5LM08 SPO3755 "Uncharacterized protein" [Ruegeria pomeroyi DSS-3 (taxid:246200)] | Back alignment and assigned GO terms |
|---|
Score = 438 (159.2 bits), Expect = 2.8e-41, P = 2.8e-41
Identities = 110/292 (37%), Positives = 158/292 (54%)
Query: 62 MLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETALMILTTL 121
+L G G+ R+ + + QGW + GT N + + + SG + L+ E +L
Sbjct: 5 LLSFGHGYTARVLSRALAPQGWRIIGTSRNPDQMEAIRASGAEPLLWPGEEPSL------ 58
Query: 122 KNYTHLLVSIPPLEGTGDPMLKH-GELLRSTLMNGHLQWLGYLSSTGVYGHSGGAWVDED 180
THLL+S P G GDP+L G+ + + +W+GYLS+T VYG GAWVDE
Sbjct: 59 DGVTHLLISTAPDSG-GDPVLAALGDQIAARA--AQFRWVGYLSTTAVYGDHDGAWVDET 115
Query: 181 YPANPTTELGRLRLSAEKGWLNLGRDLGISAQVFRLGGIYGPGRSSVDTIIKQLPLSEGQ 240
P PT GR R+ AE+ W + + VFRL GIYGPGR + K +
Sbjct: 116 TPLTPTAARGRWRVMAEQQWQAVPN---LPLHVFRLAGIYGPGRGPFSKLGK----GGIR 168
Query: 241 KMRRARQYTSRIHVDDICQVLSASIDKPSAWNVYNVVDDDPAPREEVFAYAWDLVEKKWP 300
++ + Q SRIHV+DI QVL+AS+ +P VYNV DD+P P ++V AYA +L P
Sbjct: 169 RIIKPGQVFSRIHVEDIAQVLAASMARPDPGAVYNVCDDEPVPPQDVIAYAAELQGLPLP 228
Query: 301 GLLKHRKPRENTESSNEKGSSRGEKRVSNVRMKKELGVRLWHPSYKSGLQSI 352
+ K + T + S KRV N R+K+ELGVRL +P+Y+ GL+++
Sbjct: 229 PAVDFDKA-DLTPMARSFYSEN--KRVRNDRIKEELGVRLKYPNYRVGLEAL 277
|
|
| TIGR_CMR|SPO_3755 SPO_3755 "conserved hypothetical protein" [Ruegeria pomeroyi DSS-3 (taxid:246200)] | Back alignment and assigned GO terms |
|---|
Score = 438 (159.2 bits), Expect = 2.8e-41, P = 2.8e-41
Identities = 110/292 (37%), Positives = 158/292 (54%)
Query: 62 MLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETALMILTTL 121
+L G G+ R+ + + QGW + GT N + + + SG + L+ E +L
Sbjct: 5 LLSFGHGYTARVLSRALAPQGWRIIGTSRNPDQMEAIRASGAEPLLWPGEEPSL------ 58
Query: 122 KNYTHLLVSIPPLEGTGDPMLKH-GELLRSTLMNGHLQWLGYLSSTGVYGHSGGAWVDED 180
THLL+S P G GDP+L G+ + + +W+GYLS+T VYG GAWVDE
Sbjct: 59 DGVTHLLISTAPDSG-GDPVLAALGDQIAARA--AQFRWVGYLSTTAVYGDHDGAWVDET 115
Query: 181 YPANPTTELGRLRLSAEKGWLNLGRDLGISAQVFRLGGIYGPGRSSVDTIIKQLPLSEGQ 240
P PT GR R+ AE+ W + + VFRL GIYGPGR + K +
Sbjct: 116 TPLTPTAARGRWRVMAEQQWQAVPN---LPLHVFRLAGIYGPGRGPFSKLGK----GGIR 168
Query: 241 KMRRARQYTSRIHVDDICQVLSASIDKPSAWNVYNVVDDDPAPREEVFAYAWDLVEKKWP 300
++ + Q SRIHV+DI QVL+AS+ +P VYNV DD+P P ++V AYA +L P
Sbjct: 169 RIIKPGQVFSRIHVEDIAQVLAASMARPDPGAVYNVCDDEPVPPQDVIAYAAELQGLPLP 228
Query: 301 GLLKHRKPRENTESSNEKGSSRGEKRVSNVRMKKELGVRLWHPSYKSGLQSI 352
+ K + T + S KRV N R+K+ELGVRL +P+Y+ GL+++
Sbjct: 229 PAVDFDKA-DLTPMARSFYSEN--KRVRNDRIKEELGVRLKYPNYRVGLEAL 277
|
|
| UNIPROTKB|Q2GHG5 ECH_0297 "Putative uncharacterized protein" [Ehrlichia chaffeensis str. Arkansas (taxid:205920)] | Back alignment and assigned GO terms |
|---|
Score = 390 (142.3 bits), Expect = 3.5e-36, P = 3.5e-36
Identities = 106/294 (36%), Positives = 148/294 (50%)
Query: 62 MLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETALMILTTL 121
+ G G+ R A+K+ W +SGT N K DVHL + N + +
Sbjct: 3 LFCFGYGYTARFLAQKLLPLKWKISGTLFN----KVAHTDNKDVHLLDYNFP--LPESVF 56
Query: 122 KNYTHLLVSIPPLEGTGDPML-KHGELLRSTLMNGHLQWLGYLSSTGVYGHSGGAWVDED 180
+ TH+L+SIPP GD +L K+ L+ ++WLGYLS+T VYG G WVDE
Sbjct: 57 SDVTHVLISIPP---DGDNILQKYYNFLKE------IKWLGYLSATNVYGDHNGNWVDET 107
Query: 181 YPANPTTELGRLRLSAEKGWLNLGRDLGISAQVFRLGGIYGPGRSSVDTIIKQLPLSEGQ 240
NP+T G RL EK W N + + +FRL GIYGP R+ +++ L +
Sbjct: 108 SSTNPSTPNGINRLKQEKMWHNSN----LPSHIFRLSGIYGPTRN----VLRNL-IQGNV 158
Query: 241 KMRRARQYTSRIHVDDICQVLSASIDKPSAWNVYNVVDDDPAPREEVFAYAWDLVEKKWP 300
K + SRIHVDDI +L SI P+ ++YN DD P+P V Y L+ P
Sbjct: 159 KYTISDTIFSRIHVDDIANILFTSIHNPNPGSIYNCTDDLPSPYSNVVKYGAALLNINTP 218
Query: 301 GLLKHRKPRENTE-SSNEKGSSRGEKRVSNVRMKKELGVRLWHPSYKSGLQSII 353
+P + + S N K K VSN+++K EL + L +PSY GLQS+I
Sbjct: 219 ------EPMDFEDLSDNMKRFYSERKLVSNLKIKNELNISLQYPSYIQGLQSLI 266
|
|
| TIGR_CMR|ECH_0297 ECH_0297 "conserved hypothetical protein" [Ehrlichia chaffeensis str. Arkansas (taxid:205920)] | Back alignment and assigned GO terms |
|---|
Score = 390 (142.3 bits), Expect = 3.5e-36, P = 3.5e-36
Identities = 106/294 (36%), Positives = 148/294 (50%)
Query: 62 MLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETALMILTTL 121
+ G G+ R A+K+ W +SGT N K DVHL + N + +
Sbjct: 3 LFCFGYGYTARFLAQKLLPLKWKISGTLFN----KVAHTDNKDVHLLDYNFP--LPESVF 56
Query: 122 KNYTHLLVSIPPLEGTGDPML-KHGELLRSTLMNGHLQWLGYLSSTGVYGHSGGAWVDED 180
+ TH+L+SIPP GD +L K+ L+ ++WLGYLS+T VYG G WVDE
Sbjct: 57 SDVTHVLISIPP---DGDNILQKYYNFLKE------IKWLGYLSATNVYGDHNGNWVDET 107
Query: 181 YPANPTTELGRLRLSAEKGWLNLGRDLGISAQVFRLGGIYGPGRSSVDTIIKQLPLSEGQ 240
NP+T G RL EK W N + + +FRL GIYGP R+ +++ L +
Sbjct: 108 SSTNPSTPNGINRLKQEKMWHNSN----LPSHIFRLSGIYGPTRN----VLRNL-IQGNV 158
Query: 241 KMRRARQYTSRIHVDDICQVLSASIDKPSAWNVYNVVDDDPAPREEVFAYAWDLVEKKWP 300
K + SRIHVDDI +L SI P+ ++YN DD P+P V Y L+ P
Sbjct: 159 KYTISDTIFSRIHVDDIANILFTSIHNPNPGSIYNCTDDLPSPYSNVVKYGAALLNINTP 218
Query: 301 GLLKHRKPRENTE-SSNEKGSSRGEKRVSNVRMKKELGVRLWHPSYKSGLQSII 353
+P + + S N K K VSN+++K EL + L +PSY GLQS+I
Sbjct: 219 ------EPMDFEDLSDNMKRFYSERKLVSNLKIKNELNISLQYPSYIQGLQSLI 266
|
|
| UNIPROTKB|Q60BD7 MCA0540 "Putative uncharacterized protein" [Methylococcus capsulatus str. Bath (taxid:243233)] | Back alignment and assigned GO terms |
|---|
Score = 297 (109.6 bits), Expect = 2.5e-26, P = 2.5e-26
Identities = 94/306 (30%), Positives = 140/306 (45%)
Query: 62 MLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFD-VHLFNANETALMILTT 120
+LI+G G +GR A +G V G + L + G VH +L L
Sbjct: 5 VLIVGCGDIGRRVARLESAEGRGVYGLARSPETAARLVRQGITAVHGDLDKPDSLAGLNG 64
Query: 121 LKNYTHLLV-SIPPLEGTGDPMLK-HGELLRSTLMNGHLQWLGYLSSTGVYGHSGGAWVD 178
+T L + PP G GDP L E L + G + Y+S++GVYG GG WVD
Sbjct: 65 --GWTTLYYFAPPPAAGDGDPRLAVFFEALPVRCLPGKVV---YVSTSGVYGDCGGDWVD 119
Query: 179 EDYPANPTTELGRLRLSAEKGWLNLGRDLGISAQVFRLGGIYGPGRSSVDTIIKQLPLSE 238
E+ P P T R RL+AE+ + R G++ + R+ GIYGPGR ++ + +P+
Sbjct: 120 EERPPRPQTARSRRRLAAEEALMAWSRRYGVTVVILRVPGIYGPGRLPLERLCAGVPVVR 179
Query: 239 GQKMRRARQYTSRIHVDDICQVLSASIDKPSAWNVYNVVDDDPAPREEVFAYAWDLVEKK 298
++ Y++RIH DD+ +V A+ + +A VYNV D P + F D
Sbjct: 180 QEES----PYSNRIHADDLAEVCVAAGTRAAAEGVYNVSDGHPTTLTDYFHAVADHFGLP 235
Query: 299 WPGLLKHRKPRENTESSNEKGSSRGEKRVSNVRMKKELGVRLWHPSYKSGLQSIINQMDQ 358
P + + R S KR+ N RM +EL RL +P + GL + Q
Sbjct: 236 RPPAISLAEARR-VLSPEMLSFVEESKRLDNGRMLRELRPRLHYPDLERGLPACSGGHPQ 294
Query: 359 PYQCSP 364
+Q +P
Sbjct: 295 GFQVAP 300
|
|
| UNIPROTKB|Q0BXW2 HNE_3004 "Putative uncharacterized protein" [Hyphomonas neptunium ATCC 15444 (taxid:228405)] | Back alignment and assigned GO terms |
|---|
Score = 281 (104.0 bits), Expect = 1.2e-24, P = 1.2e-24
Identities = 85/232 (36%), Positives = 119/232 (51%)
Query: 126 HLLVSIPP-LEG--TGDPMLKHGELLRSTLMNGHLQWLGYLSSTGVYGHSGGAWVDEDYP 182
H LV++PP +G +LK +L RS YLS+TGVYG G WV E P
Sbjct: 67 HWLVTLPPGKDGCPAAQSVLKCPDLSRSVT---------YLSTTGVYGDLNGGWVTERSP 117
Query: 183 ANPTTELGRLRLSAEKGWLNLGRDLGISAQVFRLGGIYGPGRSSVDTIIKQLPLSEGQKM 242
NP + R+ AE W L D +A++ RL GIYGPGRS+ D +L +++
Sbjct: 118 VNPGSPRAAARVKAEGQWQALTGD---TARLVRLPGIYGPGRSAFD----RLRDGTARRI 170
Query: 243 RRARQYTSRIHVDDICQVLSASIDKPSAWNVYNVVDDDPAPREEVFAYAWDLVEKKWPGL 302
+ Q SRIHVDDI L A + +P V+++ D+ PAP ++V A+A L+ P
Sbjct: 171 VKEGQVFSRIHVDDIASGLEALMQRPEITGVFHLCDELPAPPQDVIAHAAGLLGIDPPPE 230
Query: 303 LKHRKPRENTESSNEKGSSRGE-KRVSNVRMKKELGVRLWHPSYKSGLQSII 353
+ P + S S E KRVSN R K L R +P+Y+ GL +I+
Sbjct: 231 V----PFDAASLSPMAASFYAECKRVSNARAKAALRWRPAYPTYREGLAAIL 278
|
|
| UNIPROTKB|Q749U5 GSU2647 "NAD-dependent nucleoside diphosphate-sugar epimerase/dehydratase" [Geobacter sulfurreducens PCA (taxid:243231)] | Back alignment and assigned GO terms |
|---|
Score = 225 (84.3 bits), Expect = 1.9e-18, P = 1.9e-18
Identities = 72/293 (24%), Positives = 124/293 (42%)
Query: 61 RMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETALMILTT 120
R I+G G +G+ A G V+ + K + L + G N +E +
Sbjct: 3 RFFIVGCGDIGKKVARIALADGAGVAALIRSPEKAESLREMGVTALEANLDERDSLAGMP 62
Query: 121 LKNYTHLLVSIPPLEGTGDPMLKHGELLRSTLMNGHLQWLGYLSSTGVYGHSGGAWVDED 180
+ + PP G DP ++ + + + YLS++GVYG GG V E+
Sbjct: 63 TRGAVVFYFAPPPGGGVTDPRVR--AFCDAIAPGEEPRKIVYLSTSGVYGDCGGDVVTEE 120
Query: 181 YPANPTTELGRLRLSAEKGWLNLGRDLGISAQVFRLGGIYGPGRSSVDTIIKQLPLSEGQ 240
P NP T R R AE + G + G+ + R+ GIYGPGR + + P+ E
Sbjct: 121 TPPNPQTSRARRRYDAETVFRQWGAERGVPVVILRVTGIYGPGRLPLQQLTSGQPVLE-- 178
Query: 241 KMRRARQYTSRIHVDDICQVLSASIDKPSAWNVYNVVDDDPAPREEVFAYAWDLVEKKWP 300
+T+RIH +D+ ++ A+ + +++NV D P F D + P
Sbjct: 179 --ESLAPFTNRIHSEDLARICLAAAEHGEDGDIFNVSDGHPTTMTAYFDACADALGLPRP 236
Query: 301 GLLKHRKPRENTESSNEKGSSRGEKRVSNVRMKKELGVRLWHPSYKSGLQSII 353
+ + R + K + N M+++L V L +P+ + G++S +
Sbjct: 237 RRVTLEEARRVMTPLMFSYVTESRK-MDNRLMREKLHVTLLYPTMQEGVRSSV 288
|
|
| TIGR_CMR|GSU_2647 GSU_2647 "conserved hypothetical protein" [Geobacter sulfurreducens PCA (taxid:243231)] | Back alignment and assigned GO terms |
|---|
Score = 225 (84.3 bits), Expect = 1.9e-18, P = 1.9e-18
Identities = 72/293 (24%), Positives = 124/293 (42%)
Query: 61 RMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETALMILTT 120
R I+G G +G+ A G V+ + K + L + G N +E +
Sbjct: 3 RFFIVGCGDIGKKVARIALADGAGVAALIRSPEKAESLREMGVTALEANLDERDSLAGMP 62
Query: 121 LKNYTHLLVSIPPLEGTGDPMLKHGELLRSTLMNGHLQWLGYLSSTGVYGHSGGAWVDED 180
+ + PP G DP ++ + + + YLS++GVYG GG V E+
Sbjct: 63 TRGAVVFYFAPPPGGGVTDPRVR--AFCDAIAPGEEPRKIVYLSTSGVYGDCGGDVVTEE 120
Query: 181 YPANPTTELGRLRLSAEKGWLNLGRDLGISAQVFRLGGIYGPGRSSVDTIIKQLPLSEGQ 240
P NP T R R AE + G + G+ + R+ GIYGPGR + + P+ E
Sbjct: 121 TPPNPQTSRARRRYDAETVFRQWGAERGVPVVILRVTGIYGPGRLPLQQLTSGQPVLE-- 178
Query: 241 KMRRARQYTSRIHVDDICQVLSASIDKPSAWNVYNVVDDDPAPREEVFAYAWDLVEKKWP 300
+T+RIH +D+ ++ A+ + +++NV D P F D + P
Sbjct: 179 --ESLAPFTNRIHSEDLARICLAAAEHGEDGDIFNVSDGHPTTMTAYFDACADALGLPRP 236
Query: 301 GLLKHRKPRENTESSNEKGSSRGEKRVSNVRMKKELGVRLWHPSYKSGLQSII 353
+ + R + K + N M+++L V L +P+ + G++S +
Sbjct: 237 RRVTLEEARRVMTPLMFSYVTESRK-MDNRLMREKLHVTLLYPTMQEGVRSSV 288
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| UNIPROTKB|Q88BE7 PSPTO_0070 "Uncharacterized protein" [Pseudomonas syringae pv. tomato str. DC3000 (taxid:223283)] | Back alignment and assigned GO terms |
|---|
Score = 220 (82.5 bits), Expect = 7.0e-18, P = 7.0e-18
Identities = 80/241 (33%), Positives = 110/241 (45%)
Query: 62 MLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQS--GFDVHLFNANETALMILT 119
+LI G G +G A +++ GWVV G V EL G + LF A A
Sbjct: 6 LLIAGCGDIGSRLATRLQPHGWVVHGLRRTV---SELPAGVIGVEGDLFEAQRPAQWPTA 62
Query: 120 TLKNYTHLLVSIPPLEGTGDPMLKHGELLRSTL----MNGHL-QWLGYLSSTGVYGHSGG 174
L +Y + + TG M + E LR+ L G + L ++SS+GVYG G
Sbjct: 63 AL-DYVVYCATPSQRDETGYRMA-YVEGLRNVLSWLEQTGQQPKRLIFVSSSGVYGQQNG 120
Query: 175 AWVDEDYPANPTTELGRLRLSAEKGWLNLGRDLGISAQVFRLGGIYGPGRSSVDTIIKQL 234
WVDE+ P G + L AE+ LN G + A RL GIYGPGRS + ++Q
Sbjct: 121 EWVDENSATEPGGYTGTVMLEAEQLALNSG----LPATAVRLTGIYGPGRSDLSNRVRQ- 175
Query: 235 PLSEGQKMR-RARQYTSRIHVDDICQVLS----ASIDKPSAWNVYNVVDDDPAPREEVFA 289
G +R Y +RIH DD +L A + + + Y VDDDPA +V A
Sbjct: 176 ----GHSVRVDPPVYANRIHADDAASLLEHLLQADLRGVALESCYLGVDDDPAALADVVA 231
Query: 290 Y 290
+
Sbjct: 232 W 232
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
No EC number assignment, probably not an enzyme!
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
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 | gw1.II.1860.1 | hypothetical protein (333 aa) | |||||||||
(Populus trichocarpa) | |||||||||||
Predicted Functional Partners: | |||||||||||
 | eugene3.60030002 | Predicted protein (361 aa) | • | 0.485 | |||||||
 | estExt_fgenesh4_pg.C_LG_VI1540 | UDP-sulfoquinovose synthase (EC-3.13.1.1) (483 aa) | • | 0.457 | |||||||
 | eugene3.124160001 | Predicted protein (261 aa) | • | 0.405 | |||||||
 | grail3.0001069801 | hypothetical protein (152 aa) | • | 0.402 | |||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 364 | |||
| cd05266 | 251 | cd05266, SDR_a4, atypical (a) SDRs, subgroup 4 | 4e-72 | |
| COG0451 | 314 | COG0451, WcaG, Nucleoside-diphosphate-sugar epimer | 1e-17 | |
| cd08946 | 200 | cd08946, SDR_e, extended (e) SDRs | 2e-12 | |
| cd05232 | 303 | cd05232, UDP_G4E_4_SDR_e, UDP-glucose 4 epimerase, | 2e-10 | |
| cd05264 | 300 | cd05264, UDP_G4E_5_SDR_e, UDP-glucose 4-epimerase | 1e-07 | |
| cd05229 | 302 | cd05229, SDR_a3, atypical (a) SDRs, subgroup 3 | 2e-07 | |
| TIGR01777 | 291 | TIGR01777, yfcH, TIGR01777 family protein | 3e-07 | |
| pfam01370 | 233 | pfam01370, Epimerase, NAD dependent epimerase/dehy | 4e-07 | |
| cd05226 | 176 | cd05226, SDR_e_a, Extended (e) and atypical (a) SD | 4e-06 | |
| cd05234 | 305 | cd05234, UDP_G4E_2_SDR_e, UDP-glucose 4 epimerase, | 3e-05 | |
| COG1090 | 297 | COG1090, COG1090, Predicted nucleoside-diphosphate | 4e-05 | |
| cd05242 | 296 | cd05242, SDR_a8, atypical (a) SDRs, subgroup 8 | 6e-04 | |
| cd03370 | 156 | cd03370, NADH_oxidase, NADPH_oxidase | 7e-04 |
| >gnl|CDD|187576 cd05266, SDR_a4, atypical (a) SDRs, subgroup 4 | Back alignment and domain information |
|---|
Score = 224 bits (574), Expect = 4e-72
Identities = 97/280 (34%), Positives = 131/280 (46%), Gaps = 34/280 (12%)
Query: 62 MLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETALMILTTL 121
+LILG G++G+ A ++ QGW V+GT + K +G L L
Sbjct: 1 VLILGCGYLGQRLARQLLAQGWQVTGTTRSPEKLAADRPAGVT-PLAADLTQPG----LL 55
Query: 122 KNYTHLLVSIPPLEG----TGDPMLKH-GELLRSTLMNGHLQWLGYLSSTGVYGHSGGAW 176
+ HL++S+PP G DP L+ + L +Q + YLSSTGVYG G W
Sbjct: 56 ADVDHLVISLPPPAGSYRGGYDPGLRALLDALAQ---LPAVQRVIYLSSTGVYGDQQGEW 112
Query: 177 VDEDYPANPTTELGRLRLSAEKGWLNLGRDLGISAQVFRLGGIYGPGRSSVDTIIKQLPL 236
VDE P NP+TE GR L AE+ L LG + RL GIYGPGR + + +
Sbjct: 113 VDETSPPNPSTESGRALLEAEQALLALGS---KPTTILRLAGIYGPGRHPLRRLAQGTGR 169
Query: 237 SEGQKMRRARQYTSRIHVDDICQVLSASIDKPSAWNVYNVVDDDPAPREEVFAYAWDLVE 296
T+RIHVDD+ L+ ++ +P+ VYNVVDD P R E + A +L+
Sbjct: 170 PPA-----GNAPTNRIHVDDLVGALAFALQRPAPGPVYNVVDDLPVTRGEFYQAAAELLG 224
Query: 297 KKWPGLLKHRKPRENTESSNEKGSSRGEKRVSNVRMKKEL 336
P P R KRVSN R+K EL
Sbjct: 225 LPPP-------PFIPFA------FLREGKRVSNDRLKAEL 251
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Atypical SDRs in this subgroup are poorly defined, one member is identified as a putative NAD-dependent epimerase/dehydratase. Atypical SDRs are distinct from classical SDRs. Members of this subgroup have a glycine-rich NAD(P)-binding motif that is related to, but is different from, the archetypical SDRs, GXGXXG. This subgroup also lacks most of the characteristic active site residues of the SDRs; however, the upstream Ser is present at the usual place, and some potential catalytic residues are present in place of the usual YXXXK active site motif. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 251 |
| >gnl|CDD|223528 COG0451, WcaG, Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Score = 81.9 bits (202), Expect = 1e-17
Identities = 71/325 (21%), Positives = 111/325 (34%), Gaps = 43/325 (13%)
Query: 62 MLIL---GMGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETALMIL 118
M IL G GF+G E++ G V G L V + T ++
Sbjct: 1 MRILVTGGAGFIGSHLVERLLAAGHDVRGLDRLRDGLDPLLS---GVEFVVLDLTDRDLV 57
Query: 119 TTLKNYTHLLV------SIPPLEGTGDPMLKHGELLRSTLM------NGHLQWLGYLSST 166
L V S P DP + TL ++ + SS
Sbjct: 58 DELAKGVPDAVIHLAAQSSVPDSNASDPAEFLDVNVDGTLNLLEAARAAGVKRFVFASSV 117
Query: 167 G-VYGHSGGAWVDEDY-PANPTTELGRLRLSAEKGWLNLGRDLGISAQVFRLGGIYGPGR 224
VYG +DED P P G +L+AE+ R G+ + R +YGPG
Sbjct: 118 SVVYGDPPPLPIDEDLGPPRPLNPYGVSKLAAEQLLRAYARLYGLPVVILRPFNVYGPGD 177
Query: 225 SS------VDTIIKQLPLSEGQKMRRARQYTSR--IHVDDICQVLSASIDKPSAWNVYNV 276
V I+QL E + +R ++VDD+ L +++ P V+N+
Sbjct: 178 KPDLSSGVVSAFIRQLLKGEPIIVIGGDGSQTRDFVYVDDVADALLLALENPDG-GVFNI 236
Query: 277 VDD-DPAPREEVFAYAWDLVEKKWPGLLKHRKPRENTESSNEKGSSRGEKRVSNVRMKKE 335
E+ + V K P ++ R +G R K + + +
Sbjct: 237 GSGTAEITVRELAEAVAEAVGSKAPLIVYIPLGR--------RGDLREGKLLDISKARAA 288
Query: 336 LGVRLWHP--SYKSGLQSIINQMDQ 358
LG W P S + GL + + +
Sbjct: 289 LG---WEPKVSLEEGLADTLEWLLK 310
|
Length = 314 |
| >gnl|CDD|212494 cd08946, SDR_e, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 65.0 bits (159), Expect = 2e-12
Identities = 36/127 (28%), Positives = 57/127 (44%), Gaps = 17/127 (13%)
Query: 162 YLSSTGVYGHSGGAWVDEDYPANPTTELGRLRLSAEKGWLNLGRDLGISAQVFRLGGIYG 221
Y SS VYG G +E+ P P + G +L+AE + G G+ + RL +YG
Sbjct: 78 YASSASVYGSPEGLPEEEETPPRPLSPYGVSKLAAEHLLRSYGESYGLPVVILRLANVYG 137
Query: 222 PGRS-SVDTII----------KQLPLSEGQKMRRARQYTSRIHVDDICQVLSASIDKPSA 270
PG+ +D ++ K L + G R IHVDD+ + + +++ P
Sbjct: 138 PGQRPRLDGVVNDFIRRALEGKPLTVFGGGNQTR-----DFIHVDDVVRAILHALENPLE 192
Query: 271 WN-VYNV 276
VYN+
Sbjct: 193 GGGVYNI 199
|
Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 200 |
| >gnl|CDD|187543 cd05232, UDP_G4E_4_SDR_e, UDP-glucose 4 epimerase, subgroup 4, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 60.4 bits (147), Expect = 2e-10
Identities = 42/128 (32%), Positives = 56/128 (43%), Gaps = 13/128 (10%)
Query: 162 YLSSTGVYGHSG-GAWVDEDYPANPTTELGRLRLSAEKGWLNLGRDLGISAQVFRLGGIY 220
+LSS V G GA DE P P GR +L AE+ L LG G+ + R +Y
Sbjct: 107 FLSSVKVNGEGTVGAPFDETDPPAPQDAYGRSKLEAERALLELGASDGMEVVILRPPMVY 166
Query: 221 GPG-----RSSVDTIIKQLPLSEG-QKMRRARQYTSRIHVDDICQVLSASIDKPSAWN-V 273
GPG + I + LPL G K RR S + +D++ + I P A N
Sbjct: 167 GPGVRGNFARLMRLIDRGLPLPPGAVKNRR-----SLVSLDNLVDAIYLCISLPKAANGT 221
Query: 274 YNVVDDDP 281
+ V D P
Sbjct: 222 FLVSDGPP 229
|
UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. This subgroup is comprised of bacterial proteins, and includes the Staphylococcus aureus capsular polysaccharide Cap5N, which may have a role in the synthesis of UDP-N-acetyl-d-fucosamine. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 303 |
| >gnl|CDD|187574 cd05264, UDP_G4E_5_SDR_e, UDP-glucose 4-epimerase (G4E), subgroup 5, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 52.3 bits (126), Expect = 1e-07
Identities = 56/240 (23%), Positives = 96/240 (40%), Gaps = 32/240 (13%)
Query: 61 RMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETALM--I 117
R+LI+G GF+G + + +G V ++ EL G D + A +
Sbjct: 1 RVLIVGGNGFIGSHLVDALLEEGPQVRVFDRSI-PPYELPLGGVDYIKGDYENRADLESA 59
Query: 118 LTTLKNYTHLLVSIPPLEGTGDPMLKHGELLRSTLM---------NGHLQWLGYLSSTG- 167
L + HL + P +P+L + T+ G + + SS G
Sbjct: 60 LVGIDTVIHLASTTNPATSNKNPILDIQTNVAPTVQLLEACAAAGIGKII---FASSGGT 116
Query: 168 VYGHSGGAWVDEDYPANPTTELGRLRLSAEKGWLNLGRDL-GISAQVFRLGGIYGPGRS- 225
VYG + E P P + G +L+ EK +L L + L G+ V R+ YGPG+
Sbjct: 117 VYGVPEQLPISESDPTLPISSYGISKLAIEK-YLRLYQYLYGLDYTVLRISNPYGPGQRP 175
Query: 226 ---------SVDTIIKQLPLSEGQKMRRARQYTSRIHVDDICQVLSASIDKPSAWNVYNV 276
+++ I++ P+ R Y I++DD+ + L A + V+N+
Sbjct: 176 DGKQGVIPIALNKILRGEPIEIWGDGESIRDY---IYIDDLVEALMALLRSKGLEEVFNI 232
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This subgroup partially conserves the characteristic active site tetrad and NAD-binding motif of the extended SDRs, and has been identified as possible UDP-glucose 4-epimerase (aka UDP-galactose 4-epimerase), a homodimeric member of the extended SDR family. UDP-glucose 4-epimerase catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 300 |
| >gnl|CDD|187540 cd05229, SDR_a3, atypical (a) SDRs, subgroup 3 | Back alignment and domain information |
|---|
Score = 51.6 bits (124), Expect = 2e-07
Identities = 28/118 (23%), Positives = 48/118 (40%), Gaps = 9/118 (7%)
Query: 160 LGYLSSTGVYGHSGGAWVDEDYPANPTTELGRLRLSAEKGWLNLGRDLGISAQVFRLGGI 219
L + +YG G+ + ED P PTT GR+R E+ L I A + R
Sbjct: 98 LVLPGNVYMYGPQAGSPITEDTPFQPTTRKGRIRAEMEERLLAAHAKGDIRALIVRAPDF 157
Query: 220 YGPGRSSVDTIIKQLPLSEGQKMR------RARQYTSRIHVDDICQVLSASIDKPSAW 271
YGPG + + +G+ ++T ++ D+ + L ++P A+
Sbjct: 158 YGPGAINSWLGAALFAILQGKTAVFPGNLDTPHEWT---YLPDVARALVTLAEEPDAF 212
|
These atypical SDR family members of unknown function have a glycine-rich NAD(P)-binding motif consensus that is very similar to the extended SDRs, GXXGXXG. Generally, this group has poor conservation of the active site tetrad, However, individual sequences do contain matches to the YXXXK active site motif, and generally Tyr or Asn in place of the upstream Ser found in most SDRs. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 302 |
| >gnl|CDD|233570 TIGR01777, yfcH, TIGR01777 family protein | Back alignment and domain information |
|---|
Score = 51.1 bits (123), Expect = 3e-07
Identities = 32/131 (24%), Positives = 53/131 (40%), Gaps = 8/131 (6%)
Query: 164 SSTGVYGHSGGAWVDEDYPANPTTELGRLRLSAEKGWLNLGR---DLGISAQVFRLGGIY 220
S+ G YG S E+ L L W + DLG + R G +
Sbjct: 110 SAVGYYGPSEDREYTEEDSPAGDDFLAELCRD----WEEAAQAAEDLGTRVVLLRTGIVL 165
Query: 221 GPGRSSVDTIIKQLPLSEGQKMRRARQYTSRIHVDDICQVLSASIDKPSAWNVYNVVDDD 280
GP ++ ++ L G + RQ+ S IH++D+ Q++ +++ S N +
Sbjct: 166 GPKGGALAKMLLPFRLGLGGPLGSGRQWFSWIHIEDLVQLILFALENASVSGPVNATAPE 225
Query: 281 PAPREEVFAYA 291
P R + FA A
Sbjct: 226 PV-RNKEFAKA 235
|
This model represents a clade of proteins of unknown function including the E. coli yfcH protein [Hypothetical proteins, Conserved]. Length = 291 |
| >gnl|CDD|216461 pfam01370, Epimerase, NAD dependent epimerase/dehydratase family | Back alignment and domain information |
|---|
Score = 50.0 bits (120), Expect = 4e-07
Identities = 29/130 (22%), Positives = 54/130 (41%), Gaps = 23/130 (17%)
Query: 162 YLSSTGVYGHSGGAWVDEDYPANPTTELGRLRLSAEKGWLNLGRDLGISAQVFRLGGIYG 221
+ SS+ VYG + ED P P + +L+AE+ R G+ A + RL +YG
Sbjct: 111 FASSSEVYGDVADPPITEDTPLGPLSPYAAAKLAAERLVEAYARAYGLRAVILRLFNVYG 170
Query: 222 PGRSSVD------TIIKQLPLSEGQKMRRARQYT-------SR--IHVDDICQVLSASID 266
PG +I +++ + R ++VDD+ + + +++
Sbjct: 171 PGNPDPFVTHVIPALI--------RRILEGKPILLLGDGTQRRDFLYVDDVARAILLALE 222
Query: 267 KPSAWNVYNV 276
P +YN+
Sbjct: 223 HPDGGEIYNI 232
|
This family of proteins utilise NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions. Length = 233 |
| >gnl|CDD|187537 cd05226, SDR_e_a, Extended (e) and atypical (a) SDRs | Back alignment and domain information |
|---|
Score = 46.2 bits (110), Expect = 4e-06
Identities = 33/163 (20%), Positives = 60/163 (36%), Gaps = 14/163 (8%)
Query: 63 LILGM-GFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETALMILTTL 121
LILG GF+GR A ++ QG V+ N + + +Q V + + + +
Sbjct: 2 LILGATGFIGRALARELLEQGHEVTLLVRNTKRLSKEDQEPVAVVEGDLRDLDS-LSDAV 60
Query: 122 KNYTHLLVSIPPLEGTGDPMLKHGELLRSTL--MNGH-LQWLGYLSSTGVYGHSGGAWVD 178
+ ++ T D E R+ L ++ ++SS G YG
Sbjct: 61 QGVDVVIHLAGAPRDTRDFCEVDVEGTRNVLEAAKEAGVKHFIFISSLGAYGDLHEETEP 120
Query: 179 EDYPANPTTELGRLRLSAEKGWLNLGRDLGISAQVFRLGGIYG 221
P++ ++ E + R+ + + R G IYG
Sbjct: 121 S-----PSSPYLAVKAKTEA----VLREASLPYTIVRPGVIYG 154
|
Extended or atypical short-chain dehydrogenases/reductases (SDRs, aka tyrosine-dependent oxidoreductases) are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 176 |
| >gnl|CDD|187545 cd05234, UDP_G4E_2_SDR_e, UDP-glucose 4 epimerase, subgroup 2, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 45.0 bits (107), Expect = 3e-05
Identities = 35/131 (26%), Positives = 54/131 (41%), Gaps = 23/131 (17%)
Query: 164 SSTGVYGHSGGAWVDEDYPANPTTELGRLRLSAEKGWLNLGRDLGISAQVFRLGGIYGPG 223
SS+ VYG + EDYP P + G +L+AE G A +FR I GP
Sbjct: 117 SSSTVYGEAKVIPTPEDYPPLPISVYGASKLAAEALISAYAHLFGFQAWIFRFANIVGPR 176
Query: 224 RSS---VDTIIKQLPLSEGQKMRR----------ARQYTSRIHVDDICQVLSASIDKPSA 270
+ D I K++R RQ S ++V D + + +K +
Sbjct: 177 STHGVIYDFI---------NKLKRNPNELEVLGDGRQRKSYLYVSDCVDAMLLAWEKSTE 227
Query: 271 -WNVYNVVDDD 280
N++N+ +DD
Sbjct: 228 GVNIFNLGNDD 238
|
UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. This subgroup is comprised of archaeal and bacterial proteins, and has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 305 |
| >gnl|CDD|224015 COG1090, COG1090, Predicted nucleoside-diphosphate sugar epimerase [General function prediction only] | Back alignment and domain information |
|---|
Score = 44.6 bits (106), Expect = 4e-05
Identities = 34/132 (25%), Positives = 55/132 (41%), Gaps = 11/132 (8%)
Query: 164 SSTGVYGHSGGAWVDEDYPANPTTELGRLRLSAEKGWLNLGR---DLGISAQVFRLGGIY 220
S+ G YGHSG V E+ P L +L W LG + R G +
Sbjct: 110 SAVGYYGHSGDRVVTEESPP-GDDFLAQLCQD----WEEEALQAQQLGTRVVLLRTGVVL 164
Query: 221 GPGRSSVDTIIKQLPLSEGQKMRRARQYTSRIHVDDICQVLSASIDKPSAWNVYNVVDDD 280
P ++ ++ L G K+ RQ+ S IH++D+ + ++ +N+
Sbjct: 165 SPDGGALGKMLPLFKLGLGGKLGSGRQWFSWIHIEDLVNAILFLLENEQLSGPFNLT--A 222
Query: 281 PAP-REEVFAYA 291
P P R + FA+A
Sbjct: 223 PNPVRNKEFAHA 234
|
Length = 297 |
| >gnl|CDD|187553 cd05242, SDR_a8, atypical (a) SDRs, subgroup 8 | Back alignment and domain information |
|---|
Score = 40.7 bits (96), Expect = 6e-04
Identities = 35/131 (26%), Positives = 54/131 (41%), Gaps = 18/131 (13%)
Query: 164 SSTGVYGHSGGAWVDEDYPANPTTELGRLRLSAE--KGW---LNLGRDLGISAQVFRLGG 218
S+ G YGHSG + E+ P+ AE K W +LG + R G
Sbjct: 111 SAVGYYGHSGDEVLTENSPSG-------KDFLAEVCKAWEKAAQPASELGTRVVILRTGV 163
Query: 219 IYGPGRSSVDTIIKQLPLSE---GQKMRRARQYTSRIHVDDICQVLSASIDKPSAWNVYN 275
+ GP ++ K L G + RQ+ S IH+DD+ +++ +I+ P N
Sbjct: 164 VLGPDGGALP---KMLLPFRLGLGGPLGSGRQWMSWIHIDDLVRLIEFAIENPDLSGPVN 220
Query: 276 VVDDDPAPREE 286
V +P E
Sbjct: 221 AVAPNPVTNAE 231
|
This subgroup contains atypical SDRs of unknown function. Proteins in this subgroup have a glycine-rich NAD(P)-binding motif consensus that resembles that of the extended SDRs, (GXXGXXG or GGXGXXG), but lacks the characteristic active site residues of the SDRs. A Cys often replaces the usual Lys of the YXXXK active site motif, while the upstream Ser is generally present and Arg replaces the usual Asn. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 296 |
| >gnl|CDD|239467 cd03370, NADH_oxidase, NADPH_oxidase | Back alignment and domain information |
|---|
Score = 39.3 bits (92), Expect = 7e-04
Identities = 22/56 (39%), Positives = 33/56 (58%), Gaps = 5/56 (8%)
Query: 243 RRA-RQY-TSRIHVDDICQVLSASIDKPSAWNVYN---VVDDDPAPREEVFAYAWD 293
RR+ RQ+ T I D + ++L A++ PSA+N+ VV DPA +E +FA A
Sbjct: 8 RRSIRQFDTDPIPEDLLRRLLEAALRAPSAFNLQPWRIVVVQDPAQKEALFAAALG 63
|
Nitroreductase family containing NADH oxidase and other, uncharacterized proteins that are similar to nitroreductase. Nitroreductase catalyzes the reduction of nitroaromatic compounds such as nitrotoluenes, nitrofurans and nitroimidazoles. This process requires NAD(P)H as electron donor in an obligatory two-electron transfer and uses FMN as cofactor. The enzyme is typically a homodimer. Members of this family are also called NADH dehydrogenase, oxygen-insensitive NAD(P)H nitrogenase or dihydropteridine reductase. Length = 156 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 364 | |||
| COG1087 | 329 | GalE UDP-glucose 4-epimerase [Cell envelope biogen | 100.0 | |
| COG1088 | 340 | RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope | 100.0 | |
| PRK15181 | 348 | Vi polysaccharide biosynthesis protein TviC; Provi | 100.0 | |
| PLN02427 | 386 | UDP-apiose/xylose synthase | 100.0 | |
| KOG0747 | 331 | consensus Putative NAD+-dependent epimerases [Carb | 100.0 | |
| PRK11908 | 347 | NAD-dependent epimerase/dehydratase family protein | 100.0 | |
| PLN02166 | 436 | dTDP-glucose 4,6-dehydratase | 100.0 | |
| PLN02695 | 370 | GDP-D-mannose-3',5'-epimerase | 100.0 | |
| PRK08125 | 660 | bifunctional UDP-glucuronic acid decarboxylase/UDP | 100.0 | |
| PLN02206 | 442 | UDP-glucuronate decarboxylase | 100.0 | |
| PRK10217 | 355 | dTDP-glucose 4,6-dehydratase; Provisional | 100.0 | |
| TIGR01472 | 343 | gmd GDP-mannose 4,6-dehydratase. Excluded from thi | 100.0 | |
| PLN02572 | 442 | UDP-sulfoquinovose synthase | 100.0 | |
| PLN02214 | 342 | cinnamoyl-CoA reductase | 100.0 | |
| PLN02653 | 340 | GDP-mannose 4,6-dehydratase | 100.0 | |
| TIGR02622 | 349 | CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member | 100.0 | |
| PLN02240 | 352 | UDP-glucose 4-epimerase | 100.0 | |
| PRK10084 | 352 | dTDP-glucose 4,6 dehydratase; Provisional | 100.0 | |
| PRK10675 | 338 | UDP-galactose-4-epimerase; Provisional | 100.0 | |
| PLN02260 | 668 | probable rhamnose biosynthetic enzyme | 100.0 | |
| KOG1429 | 350 | consensus dTDP-glucose 4-6-dehydratase/UDP-glucuro | 100.0 | |
| PLN00198 | 338 | anthocyanidin reductase; Provisional | 100.0 | |
| COG0451 | 314 | WcaG Nucleoside-diphosphate-sugar epimerases [Cell | 100.0 | |
| PLN02650 | 351 | dihydroflavonol-4-reductase | 100.0 | |
| KOG1502 | 327 | consensus Flavonol reductase/cinnamoyl-CoA reducta | 100.0 | |
| PLN00016 | 378 | RNA-binding protein; Provisional | 100.0 | |
| TIGR01181 | 317 | dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This | 100.0 | |
| PLN02662 | 322 | cinnamyl-alcohol dehydrogenase family protein | 100.0 | |
| KOG1371 | 343 | consensus UDP-glucose 4-epimerase/UDP-sulfoquinovo | 100.0 | |
| PLN02989 | 325 | cinnamyl-alcohol dehydrogenase family protein | 100.0 | |
| PLN02896 | 353 | cinnamyl-alcohol dehydrogenase | 100.0 | |
| PLN02986 | 322 | cinnamyl-alcohol dehydrogenase family protein | 100.0 | |
| PLN02725 | 306 | GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductas | 100.0 | |
| PRK11150 | 308 | rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Pro | 100.0 | |
| PRK09987 | 299 | dTDP-4-dehydrorhamnose reductase; Provisional | 100.0 | |
| TIGR03466 | 328 | HpnA hopanoid-associated sugar epimerase. The sequ | 100.0 | |
| TIGR02197 | 314 | heptose_epim ADP-L-glycero-D-manno-heptose-6-epime | 100.0 | |
| TIGR01179 | 328 | galE UDP-glucose-4-epimerase. This enzyme intercon | 100.0 | |
| TIGR01214 | 287 | rmlD dTDP-4-dehydrorhamnose reductase. This enzyme | 100.0 | |
| PLN02686 | 367 | cinnamoyl-CoA reductase | 100.0 | |
| TIGR01777 | 292 | yfcH conserved hypothetical protein TIGR01777. Thi | 100.0 | |
| COG1090 | 297 | Predicted nucleoside-diphosphate sugar epimerase [ | 100.0 | |
| PF01073 | 280 | 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso | 100.0 | |
| CHL00194 | 317 | ycf39 Ycf39; Provisional | 100.0 | |
| PF04321 | 286 | RmlD_sub_bind: RmlD substrate binding domain; Inte | 100.0 | |
| COG1091 | 281 | RfbD dTDP-4-dehydrorhamnose reductase [Cell envelo | 100.0 | |
| TIGR03589 | 324 | PseB UDP-N-acetylglucosamine 4,6-dehydratase. This | 100.0 | |
| KOG1430 | 361 | consensus C-3 sterol dehydrogenase/3-beta-hydroxys | 100.0 | |
| COG1089 | 345 | Gmd GDP-D-mannose dehydratase [Cell envelope bioge | 100.0 | |
| PRK05865 | 854 | hypothetical protein; Provisional | 99.98 | |
| PLN02583 | 297 | cinnamoyl-CoA reductase | 99.97 | |
| PF01370 | 236 | Epimerase: NAD dependent epimerase/dehydratase fam | 99.97 | |
| PRK07201 | 657 | short chain dehydrogenase; Provisional | 99.97 | |
| KOG1431 | 315 | consensus GDP-L-fucose synthetase [Carbohydrate tr | 99.97 | |
| PLN02996 | 491 | fatty acyl-CoA reductase | 99.96 | |
| PLN02778 | 298 | 3,5-epimerase/4-reductase | 99.95 | |
| PLN02657 | 390 | 3,8-divinyl protochlorophyllide a 8-vinyl reductas | 99.95 | |
| TIGR01746 | 367 | Thioester-redct thioester reductase domain. It has | 99.94 | |
| TIGR03649 | 285 | ergot_EASG ergot alkaloid biosynthesis protein, AF | 99.93 | |
| PRK12320 | 699 | hypothetical protein; Provisional | 99.92 | |
| KOG1372 | 376 | consensus GDP-mannose 4,6 dehydratase [Carbohydrat | 99.92 | |
| PF02719 | 293 | Polysacc_synt_2: Polysaccharide biosynthesis prote | 99.92 | |
| COG1086 | 588 | Predicted nucleoside-diphosphate sugar epimerases | 99.92 | |
| PLN02260 | 668 | probable rhamnose biosynthetic enzyme | 99.91 | |
| KOG2865 | 391 | consensus NADH:ubiquinone oxidoreductase, NDUFA9/3 | 99.91 | |
| PF13460 | 183 | NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X | 99.91 | |
| PLN02503 | 605 | fatty acyl-CoA reductase 2 | 99.91 | |
| PF07993 | 249 | NAD_binding_4: Male sterility protein; InterPro: I | 99.9 | |
| PLN00141 | 251 | Tic62-NAD(P)-related group II protein; Provisional | 99.89 | |
| COG3320 | 382 | Putative dehydrogenase domain of multifunctional n | 99.89 | |
| TIGR03443 | 1389 | alpha_am_amid L-aminoadipate-semialdehyde dehydrog | 99.88 | |
| KOG3019 | 315 | consensus Predicted nucleoside-diphosphate sugar e | 99.87 | |
| PF05368 | 233 | NmrA: NmrA-like family; InterPro: IPR008030 NmrA i | 99.86 | |
| PRK06482 | 276 | short chain dehydrogenase; Provisional | 99.85 | |
| PRK13394 | 262 | 3-hydroxybutyrate dehydrogenase; Provisional | 99.84 | |
| PLN03209 | 576 | translocon at the inner envelope of chloroplast su | 99.84 | |
| TIGR01963 | 255 | PHB_DH 3-hydroxybutyrate dehydrogenase. This model | 99.83 | |
| PRK12825 | 249 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.82 | |
| PRK12429 | 258 | 3-hydroxybutyrate dehydrogenase; Provisional | 99.82 | |
| PRK12826 | 251 | 3-ketoacyl-(acyl-carrier-protein) reductase; Revie | 99.8 | |
| PRK07074 | 257 | short chain dehydrogenase; Provisional | 99.8 | |
| PRK07775 | 274 | short chain dehydrogenase; Provisional | 99.8 | |
| PRK08263 | 275 | short chain dehydrogenase; Provisional | 99.8 | |
| PRK05875 | 276 | short chain dehydrogenase; Provisional | 99.79 | |
| COG0702 | 275 | Predicted nucleoside-diphosphate-sugar epimerases | 99.79 | |
| PRK06180 | 277 | short chain dehydrogenase; Provisional | 99.79 | |
| PRK12828 | 239 | short chain dehydrogenase; Provisional | 99.78 | |
| PRK05653 | 246 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.78 | |
| PRK09135 | 249 | pteridine reductase; Provisional | 99.78 | |
| PRK07231 | 251 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.78 | |
| PRK06182 | 273 | short chain dehydrogenase; Validated | 99.78 | |
| PRK06914 | 280 | short chain dehydrogenase; Provisional | 99.77 | |
| PRK07067 | 257 | sorbitol dehydrogenase; Provisional | 99.77 | |
| PRK08219 | 227 | short chain dehydrogenase; Provisional | 99.76 | |
| PRK09186 | 256 | flagellin modification protein A; Provisional | 99.76 | |
| PRK07523 | 255 | gluconate 5-dehydrogenase; Provisional | 99.76 | |
| PRK06138 | 252 | short chain dehydrogenase; Provisional | 99.76 | |
| PRK12384 | 259 | sorbitol-6-phosphate dehydrogenase; Provisional | 99.76 | |
| PRK07774 | 250 | short chain dehydrogenase; Provisional | 99.76 | |
| KOG2774 | 366 | consensus NAD dependent epimerase [General functio | 99.76 | |
| PRK12829 | 264 | short chain dehydrogenase; Provisional | 99.76 | |
| PRK12823 | 260 | benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat | 99.75 | |
| KOG1221 | 467 | consensus Acyl-CoA reductase [Lipid transport and | 99.75 | |
| TIGR03206 | 250 | benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr | 99.75 | |
| PRK07060 | 245 | short chain dehydrogenase; Provisional | 99.74 | |
| PRK12746 | 254 | short chain dehydrogenase; Provisional | 99.74 | |
| PRK08063 | 250 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.74 | |
| PRK07806 | 248 | short chain dehydrogenase; Provisional | 99.74 | |
| PRK06077 | 252 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.73 | |
| PRK07890 | 258 | short chain dehydrogenase; Provisional | 99.73 | |
| PRK05993 | 277 | short chain dehydrogenase; Provisional | 99.73 | |
| PRK05876 | 275 | short chain dehydrogenase; Provisional | 99.73 | |
| PRK12935 | 247 | acetoacetyl-CoA reductase; Provisional | 99.73 | |
| PRK06194 | 287 | hypothetical protein; Provisional | 99.72 | |
| PRK12745 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 99.72 | |
| PRK12827 | 249 | short chain dehydrogenase; Provisional | 99.71 | |
| PRK06701 | 290 | short chain dehydrogenase; Provisional | 99.71 | |
| PRK12939 | 250 | short chain dehydrogenase; Provisional | 99.71 | |
| PRK08220 | 252 | 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated | 99.71 | |
| PRK09134 | 258 | short chain dehydrogenase; Provisional | 99.71 | |
| PRK07454 | 241 | short chain dehydrogenase; Provisional | 99.71 | |
| PRK07577 | 234 | short chain dehydrogenase; Provisional | 99.71 | |
| PRK05557 | 248 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.7 | |
| PRK06128 | 300 | oxidoreductase; Provisional | 99.7 | |
| COG2910 | 211 | Putative NADH-flavin reductase [General function p | 99.7 | |
| PRK06179 | 270 | short chain dehydrogenase; Provisional | 99.7 | |
| PRK08324 | 681 | short chain dehydrogenase; Validated | 99.69 | |
| PRK09291 | 257 | short chain dehydrogenase; Provisional | 99.69 | |
| PRK05565 | 247 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.69 | |
| PLN02253 | 280 | xanthoxin dehydrogenase | 99.69 | |
| PRK08017 | 256 | oxidoreductase; Provisional | 99.68 | |
| PRK06523 | 260 | short chain dehydrogenase; Provisional | 99.68 | |
| PRK10538 | 248 | malonic semialdehyde reductase; Provisional | 99.68 | |
| PRK12936 | 245 | 3-ketoacyl-(acyl-carrier-protein) reductase NodG; | 99.68 | |
| PRK12824 | 245 | acetoacetyl-CoA reductase; Provisional | 99.67 | |
| TIGR01832 | 248 | kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod | 99.67 | |
| PRK05717 | 255 | oxidoreductase; Validated | 99.67 | |
| PRK06123 | 248 | short chain dehydrogenase; Provisional | 99.67 | |
| PRK07825 | 273 | short chain dehydrogenase; Provisional | 99.67 | |
| PRK07666 | 239 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.67 | |
| PRK06841 | 255 | short chain dehydrogenase; Provisional | 99.67 | |
| PRK07024 | 257 | short chain dehydrogenase; Provisional | 99.67 | |
| PRK06398 | 258 | aldose dehydrogenase; Validated | 99.67 | |
| PRK08628 | 258 | short chain dehydrogenase; Provisional | 99.67 | |
| PRK06935 | 258 | 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | 99.66 | |
| PRK07326 | 237 | short chain dehydrogenase; Provisional | 99.66 | |
| PRK08213 | 259 | gluconate 5-dehydrogenase; Provisional | 99.66 | |
| PRK07109 | 334 | short chain dehydrogenase; Provisional | 99.66 | |
| PRK08339 | 263 | short chain dehydrogenase; Provisional | 99.66 | |
| PRK09730 | 247 | putative NAD(P)-binding oxidoreductase; Provisiona | 99.66 | |
| PRK07478 | 254 | short chain dehydrogenase; Provisional | 99.65 | |
| PRK06181 | 263 | short chain dehydrogenase; Provisional | 99.65 | |
| TIGR01830 | 239 | 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re | 99.65 | |
| PRK08277 | 278 | D-mannonate oxidoreductase; Provisional | 99.65 | |
| PRK08643 | 256 | acetoin reductase; Validated | 99.65 | |
| PRK05650 | 270 | short chain dehydrogenase; Provisional | 99.65 | |
| PRK05693 | 274 | short chain dehydrogenase; Provisional | 99.65 | |
| PRK06500 | 249 | short chain dehydrogenase; Provisional | 99.65 | |
| PRK06124 | 256 | gluconate 5-dehydrogenase; Provisional | 99.65 | |
| PRK07856 | 252 | short chain dehydrogenase; Provisional | 99.64 | |
| PRK07102 | 243 | short chain dehydrogenase; Provisional | 99.64 | |
| PRK07063 | 260 | short chain dehydrogenase; Provisional | 99.64 | |
| PRK06198 | 260 | short chain dehydrogenase; Provisional | 99.64 | |
| PRK07985 | 294 | oxidoreductase; Provisional | 99.64 | |
| PRK07453 | 322 | protochlorophyllide oxidoreductase; Validated | 99.64 | |
| PRK07814 | 263 | short chain dehydrogenase; Provisional | 99.64 | |
| PRK06114 | 254 | short chain dehydrogenase; Provisional | 99.64 | |
| PRK08217 | 253 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.64 | |
| PRK06197 | 306 | short chain dehydrogenase; Provisional | 99.64 | |
| PRK08085 | 254 | gluconate 5-dehydrogenase; Provisional | 99.63 | |
| PRK07041 | 230 | short chain dehydrogenase; Provisional | 99.63 | |
| PRK06463 | 255 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.63 | |
| PRK06949 | 258 | short chain dehydrogenase; Provisional | 99.63 | |
| PRK06483 | 236 | dihydromonapterin reductase; Provisional | 99.63 | |
| PRK08265 | 261 | short chain dehydrogenase; Provisional | 99.63 | |
| PRK09242 | 257 | tropinone reductase; Provisional | 99.63 | |
| PRK08264 | 238 | short chain dehydrogenase; Validated | 99.62 | |
| PRK07069 | 251 | short chain dehydrogenase; Validated | 99.62 | |
| KOG1203 | 411 | consensus Predicted dehydrogenase [Carbohydrate tr | 99.62 | |
| PRK07035 | 252 | short chain dehydrogenase; Provisional | 99.62 | |
| PRK06196 | 315 | oxidoreductase; Provisional | 99.62 | |
| PRK08642 | 253 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.62 | |
| PRK07097 | 265 | gluconate 5-dehydrogenase; Provisional | 99.62 | |
| PRK08589 | 272 | short chain dehydrogenase; Validated | 99.62 | |
| PRK06057 | 255 | short chain dehydrogenase; Provisional | 99.62 | |
| PRK05867 | 253 | short chain dehydrogenase; Provisional | 99.61 | |
| PRK08267 | 260 | short chain dehydrogenase; Provisional | 99.61 | |
| PRK12938 | 246 | acetyacetyl-CoA reductase; Provisional | 99.61 | |
| PRK06113 | 255 | 7-alpha-hydroxysteroid dehydrogenase; Validated | 99.61 | |
| PRK05866 | 293 | short chain dehydrogenase; Provisional | 99.61 | |
| PRK12742 | 237 | oxidoreductase; Provisional | 99.61 | |
| PRK06172 | 253 | short chain dehydrogenase; Provisional | 99.61 | |
| PRK12743 | 256 | oxidoreductase; Provisional | 99.61 | |
| PRK06550 | 235 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.61 | |
| PRK08251 | 248 | short chain dehydrogenase; Provisional | 99.61 | |
| PRK12937 | 245 | short chain dehydrogenase; Provisional | 99.6 | |
| TIGR01829 | 242 | AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy | 99.6 | |
| PRK06947 | 248 | glucose-1-dehydrogenase; Provisional | 99.6 | |
| TIGR02632 | 676 | RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc | 99.59 | |
| PRK06101 | 240 | short chain dehydrogenase; Provisional | 99.59 | |
| PRK12744 | 257 | short chain dehydrogenase; Provisional | 99.59 | |
| PRK07904 | 253 | short chain dehydrogenase; Provisional | 99.59 | |
| PRK07677 | 252 | short chain dehydrogenase; Provisional | 99.59 | |
| COG0300 | 265 | DltE Short-chain dehydrogenases of various substra | 99.59 | |
| PRK06139 | 330 | short chain dehydrogenase; Provisional | 99.59 | |
| PRK12747 | 252 | short chain dehydrogenase; Provisional | 99.59 | |
| PRK07023 | 243 | short chain dehydrogenase; Provisional | 99.59 | |
| PRK08226 | 263 | short chain dehydrogenase; Provisional | 99.59 | |
| COG4221 | 246 | Short-chain alcohol dehydrogenase of unknown speci | 99.58 | |
| PRK06924 | 251 | short chain dehydrogenase; Provisional | 99.58 | |
| PRK06200 | 263 | 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog | 99.58 | |
| PRK12481 | 251 | 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | 99.58 | |
| PRK07831 | 262 | short chain dehydrogenase; Provisional | 99.58 | |
| PRK12748 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 99.58 | |
| PRK07062 | 265 | short chain dehydrogenase; Provisional | 99.58 | |
| TIGR02415 | 254 | 23BDH acetoin reductases. One member of this famil | 99.57 | |
| PRK08703 | 239 | short chain dehydrogenase; Provisional | 99.56 | |
| PRK05786 | 238 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.56 | |
| PRK08340 | 259 | glucose-1-dehydrogenase; Provisional | 99.56 | |
| PRK07576 | 264 | short chain dehydrogenase; Provisional | 99.56 | |
| PRK08416 | 260 | 7-alpha-hydroxysteroid dehydrogenase; Provisional | 99.55 | |
| PRK06171 | 266 | sorbitol-6-phosphate 2-dehydrogenase; Provisional | 99.55 | |
| PRK08993 | 253 | 2-deoxy-D-gluconate 3-dehydrogenase; Validated | 99.54 | |
| PRK06953 | 222 | short chain dehydrogenase; Provisional | 99.54 | |
| PRK09072 | 263 | short chain dehydrogenase; Provisional | 99.54 | |
| TIGR03325 | 262 | BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro | 99.52 | |
| PRK08945 | 247 | putative oxoacyl-(acyl carrier protein) reductase; | 99.52 | |
| PRK06125 | 259 | short chain dehydrogenase; Provisional | 99.52 | |
| PRK08936 | 261 | glucose-1-dehydrogenase; Provisional | 99.52 | |
| PRK05854 | 313 | short chain dehydrogenase; Provisional | 99.52 | |
| PRK12859 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 99.51 | |
| PRK06484 | 520 | short chain dehydrogenase; Validated | 99.51 | |
| PRK07832 | 272 | short chain dehydrogenase; Provisional | 99.5 | |
| PRK05872 | 296 | short chain dehydrogenase; Provisional | 99.5 | |
| PRK08278 | 273 | short chain dehydrogenase; Provisional | 99.49 | |
| TIGR02685 | 267 | pter_reduc_Leis pteridine reductase. Pteridine red | 99.49 | |
| PRK05884 | 223 | short chain dehydrogenase; Provisional | 99.48 | |
| PRK07578 | 199 | short chain dehydrogenase; Provisional | 99.48 | |
| PRK06079 | 252 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.48 | |
| TIGR01831 | 239 | fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas | 99.46 | |
| PRK07791 | 286 | short chain dehydrogenase; Provisional | 99.46 | |
| PRK07792 | 306 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.46 | |
| PRK07201 | 657 | short chain dehydrogenase; Provisional | 99.46 | |
| PRK05855 | 582 | short chain dehydrogenase; Validated | 99.45 | |
| KOG4288 | 283 | consensus Predicted oxidoreductase [General functi | 99.44 | |
| PRK06940 | 275 | short chain dehydrogenase; Provisional | 99.44 | |
| PRK06505 | 271 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.43 | |
| PRK09009 | 235 | C factor cell-cell signaling protein; Provisional | 99.42 | |
| PRK08594 | 257 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.42 | |
| PRK08690 | 261 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.42 | |
| PRK07984 | 262 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.41 | |
| PRK08177 | 225 | short chain dehydrogenase; Provisional | 99.41 | |
| PRK07533 | 258 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.41 | |
| PRK07370 | 258 | enoyl-(acyl carrier protein) reductase; Validated | 99.39 | |
| PRK06603 | 260 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.39 | |
| PRK05599 | 246 | hypothetical protein; Provisional | 99.38 | |
| PRK08415 | 274 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.37 | |
| PRK08159 | 272 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.37 | |
| TIGR01289 | 314 | LPOR light-dependent protochlorophyllide reductase | 99.37 | |
| PRK06997 | 260 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.37 | |
| PRK06484 | 520 | short chain dehydrogenase; Validated | 99.35 | |
| PRK08261 | 450 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.35 | |
| PLN02780 | 320 | ketoreductase/ oxidoreductase | 99.34 | |
| PRK12367 | 245 | short chain dehydrogenase; Provisional | 99.33 | |
| PRK07424 | 406 | bifunctional sterol desaturase/short chain dehydro | 99.33 | |
| KOG4039 | 238 | consensus Serine/threonine kinase TIP30/CC3 [Signa | 99.33 | |
| TIGR01500 | 256 | sepiapter_red sepiapterin reductase. This model de | 99.32 | |
| PRK07889 | 256 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.29 | |
| smart00822 | 180 | PKS_KR This enzymatic domain is part of bacterial | 99.24 | |
| KOG1205 | 282 | consensus Predicted dehydrogenase [Secondary metab | 99.23 | |
| PRK08862 | 227 | short chain dehydrogenase; Provisional | 99.2 | |
| PF13561 | 241 | adh_short_C2: Enoyl-(Acyl carrier protein) reducta | 99.19 | |
| PRK08303 | 305 | short chain dehydrogenase; Provisional | 99.19 | |
| PRK12428 | 241 | 3-alpha-hydroxysteroid dehydrogenase; Provisional | 99.16 | |
| KOG0725 | 270 | consensus Reductases with broad range of substrate | 99.16 | |
| PLN00015 | 308 | protochlorophyllide reductase | 99.15 | |
| KOG1208 | 314 | consensus Dehydrogenases with different specificit | 99.14 | |
| KOG1201 | 300 | consensus Hydroxysteroid 17-beta dehydrogenase 11 | 99.11 | |
| PF00106 | 167 | adh_short: short chain dehydrogenase alcohol dehyd | 99.06 | |
| KOG1209 | 289 | consensus 1-Acyl dihydroxyacetone phosphate reduct | 99.05 | |
| PLN02730 | 303 | enoyl-[acyl-carrier-protein] reductase | 99.04 | |
| COG3967 | 245 | DltE Short-chain dehydrogenase involved in D-alani | 99.0 | |
| KOG1610 | 322 | consensus Corticosteroid 11-beta-dehydrogenase and | 98.99 | |
| KOG1200 | 256 | consensus Mitochondrial/plastidial beta-ketoacyl-A | 98.96 | |
| KOG1611 | 249 | consensus Predicted short chain-type dehydrogenase | 98.92 | |
| KOG4169 | 261 | consensus 15-hydroxyprostaglandin dehydrogenase an | 98.91 | |
| PRK06300 | 299 | enoyl-(acyl carrier protein) reductase; Provisiona | 98.88 | |
| COG1028 | 251 | FabG Dehydrogenases with different specificities ( | 98.84 | |
| KOG1207 | 245 | consensus Diacetyl reductase/L-xylulose reductase | 98.84 | |
| PF08659 | 181 | KR: KR domain; InterPro: IPR013968 This domain is | 98.83 | |
| PRK08309 | 177 | short chain dehydrogenase; Provisional | 98.79 | |
| PTZ00325 | 321 | malate dehydrogenase; Provisional | 98.68 | |
| KOG1014 | 312 | consensus 17 beta-hydroxysteroid dehydrogenase typ | 98.64 | |
| KOG1210 | 331 | consensus Predicted 3-ketosphinganine reductase [S | 98.64 | |
| COG1748 | 389 | LYS9 Saccharopine dehydrogenase and related protei | 98.61 | |
| TIGR02813 | 2582 | omega_3_PfaA polyketide-type polyunsaturated fatty | 98.55 | |
| PLN00106 | 323 | malate dehydrogenase | 98.54 | |
| PF13950 | 62 | Epimerase_Csub: UDP-glucose 4-epimerase C-term sub | 98.48 | |
| COG0623 | 259 | FabI Enoyl-[acyl-carrier-protein] | 98.41 | |
| PRK04148 | 134 | hypothetical protein; Provisional | 98.34 | |
| PRK06720 | 169 | hypothetical protein; Provisional | 98.31 | |
| TIGR00715 | 256 | precor6x_red precorrin-6x reductase. This enzyme w | 98.19 | |
| KOG1199 | 260 | consensus Short-chain alcohol dehydrogenase/3-hydr | 98.12 | |
| PRK09620 | 229 | hypothetical protein; Provisional | 98.11 | |
| COG0569 | 225 | TrkA K+ transport systems, NAD-binding component [ | 98.11 | |
| PRK06732 | 229 | phosphopantothenate--cysteine ligase; Validated | 98.03 | |
| PF02254 | 116 | TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg | 97.99 | |
| KOG1478 | 341 | consensus 3-keto sterol reductase [Lipid transport | 97.82 | |
| PF03435 | 386 | Saccharop_dh: Saccharopine dehydrogenase ; InterPr | 97.81 | |
| PRK13656 | 398 | trans-2-enoyl-CoA reductase; Provisional | 97.81 | |
| cd01078 | 194 | NAD_bind_H4MPT_DH NADP binding domain of methylene | 97.81 | |
| PF01488 | 135 | Shikimate_DH: Shikimate / quinate 5-dehydrogenase; | 97.76 | |
| cd01338 | 322 | MDH_choloroplast_like Chloroplast-like malate dehy | 97.76 | |
| PRK09496 | 453 | trkA potassium transporter peripheral membrane com | 97.74 | |
| PRK14982 | 340 | acyl-ACP reductase; Provisional | 97.71 | |
| cd01336 | 325 | MDH_cytoplasmic_cytosolic Cytoplasmic and cytosoli | 97.6 | |
| KOG1204 | 253 | consensus Predicted dehydrogenase [Secondary metab | 97.59 | |
| PRK09496 | 453 | trkA potassium transporter peripheral membrane com | 97.58 | |
| PLN02968 | 381 | Probable N-acetyl-gamma-glutamyl-phosphate reducta | 97.56 | |
| PRK14874 | 334 | aspartate-semialdehyde dehydrogenase; Provisional | 97.54 | |
| PRK06129 | 308 | 3-hydroxyacyl-CoA dehydrogenase; Validated | 97.51 | |
| PRK10669 | 558 | putative cation:proton antiport protein; Provision | 97.49 | |
| PRK07688 | 339 | thiamine/molybdopterin biosynthesis ThiF/MoeB-like | 97.48 | |
| PRK12475 | 338 | thiamine/molybdopterin biosynthesis MoeB-like prot | 97.45 | |
| PF03446 | 163 | NAD_binding_2: NAD binding domain of 6-phosphogluc | 97.43 | |
| PRK03659 | 601 | glutathione-regulated potassium-efflux system prot | 97.41 | |
| COG2085 | 211 | Predicted dinucleotide-binding enzymes [General fu | 97.39 | |
| PRK12548 | 289 | shikimate 5-dehydrogenase; Provisional | 97.36 | |
| PRK03562 | 621 | glutathione-regulated potassium-efflux system prot | 97.35 | |
| PF03721 | 185 | UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogen | 97.34 | |
| PRK05086 | 312 | malate dehydrogenase; Provisional | 97.32 | |
| PF02826 | 178 | 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy | 97.3 | |
| COG1004 | 414 | Ugd Predicted UDP-glucose 6-dehydrogenase [Cell en | 97.29 | |
| PF00899 | 135 | ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-a | 97.27 | |
| PRK11064 | 415 | wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Pro | 97.21 | |
| PRK05671 | 336 | aspartate-semialdehyde dehydrogenase; Reviewed | 97.19 | |
| PRK05579 | 399 | bifunctional phosphopantothenoylcysteine decarboxy | 97.18 | |
| PF03807 | 96 | F420_oxidored: NADP oxidoreductase coenzyme F420-d | 97.18 | |
| TIGR02356 | 202 | adenyl_thiF thiazole biosynthesis adenylyltransfer | 97.16 | |
| PRK08223 | 287 | hypothetical protein; Validated | 97.15 | |
| COG1064 | 339 | AdhP Zn-dependent alcohol dehydrogenases [General | 97.11 | |
| PF01118 | 121 | Semialdhyde_dh: Semialdehyde dehydrogenase, NAD bi | 97.1 | |
| PRK08664 | 349 | aspartate-semialdehyde dehydrogenase; Reviewed | 97.05 | |
| TIGR02355 | 240 | moeB molybdopterin synthase sulfurylase MoeB. This | 97.03 | |
| cd01065 | 155 | NAD_bind_Shikimate_DH NAD(P) binding domain of Shi | 97.02 | |
| PLN02819 | 1042 | lysine-ketoglutarate reductase/saccharopine dehydr | 97.02 | |
| TIGR02853 | 287 | spore_dpaA dipicolinic acid synthetase, A subunit. | 97.01 | |
| PRK08229 | 341 | 2-dehydropantoate 2-reductase; Provisional | 97.0 | |
| PF10727 | 127 | Rossmann-like: Rossmann-like domain; InterPro: IPR | 97.0 | |
| PF04127 | 185 | DFP: DNA / pantothenate metabolism flavoprotein; I | 96.99 | |
| PRK07417 | 279 | arogenate dehydrogenase; Reviewed | 96.98 | |
| cd01075 | 200 | NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l | 96.96 | |
| PRK00094 | 325 | gpsA NAD(P)H-dependent glycerol-3-phosphate dehydr | 96.95 | |
| PRK12921 | 305 | 2-dehydropantoate 2-reductase; Provisional | 96.95 | |
| PRK08306 | 296 | dipicolinate synthase subunit A; Reviewed | 96.92 | |
| TIGR01915 | 219 | npdG NADPH-dependent F420 reductase. This model re | 96.91 | |
| cd00757 | 228 | ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1 | 96.9 | |
| KOG2733 | 423 | consensus Uncharacterized membrane protein [Functi | 96.9 | |
| KOG0023 | 360 | consensus Alcohol dehydrogenase, class V [Secondar | 96.89 | |
| PRK14106 | 450 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 96.89 | |
| PRK00436 | 343 | argC N-acetyl-gamma-glutamyl-phosphate reductase; | 96.89 | |
| PRK00258 | 278 | aroE shikimate 5-dehydrogenase; Reviewed | 96.88 | |
| PRK11559 | 296 | garR tartronate semialdehyde reductase; Provisiona | 96.87 | |
| PRK08328 | 231 | hypothetical protein; Provisional | 96.86 | |
| PRK05597 | 355 | molybdopterin biosynthesis protein MoeB; Validated | 96.86 | |
| PRK11880 | 267 | pyrroline-5-carboxylate reductase; Reviewed | 96.84 | |
| TIGR03026 | 411 | NDP-sugDHase nucleotide sugar dehydrogenase. All o | 96.79 | |
| TIGR01296 | 339 | asd_B aspartate-semialdehyde dehydrogenase (peptid | 96.78 | |
| PRK06522 | 304 | 2-dehydropantoate 2-reductase; Reviewed | 96.78 | |
| cd01483 | 143 | E1_enzyme_family Superfamily of activating enzymes | 96.77 | |
| PRK14618 | 328 | NAD(P)H-dependent glycerol-3-phosphate dehydrogena | 96.76 | |
| PLN02712 | 667 | arogenate dehydrogenase | 96.74 | |
| TIGR02354 | 200 | thiF_fam2 thiamine biosynthesis protein ThiF, fami | 96.73 | |
| PRK05690 | 245 | molybdopterin biosynthesis protein MoeB; Provision | 96.72 | |
| PRK15461 | 296 | NADH-dependent gamma-hydroxybutyrate dehydrogenase | 96.71 | |
| PLN02353 | 473 | probable UDP-glucose 6-dehydrogenase | 96.69 | |
| TIGR01758 | 324 | MDH_euk_cyt malate dehydrogenase, NAD-dependent. T | 96.65 | |
| cd01492 | 197 | Aos1_SUMO Ubiquitin activating enzyme (E1) subunit | 96.63 | |
| PRK07878 | 392 | molybdopterin biosynthesis-like protein MoeZ; Vali | 96.63 | |
| COG3268 | 382 | Uncharacterized conserved protein [Function unknow | 96.62 | |
| PF01210 | 157 | NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate | 96.62 | |
| PF00056 | 141 | Ldh_1_N: lactate/malate dehydrogenase, NAD binding | 96.62 | |
| TIGR00872 | 298 | gnd_rel 6-phosphogluconate dehydrogenase (decarbox | 96.61 | |
| PRK07531 | 495 | bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioe | 96.6 | |
| TIGR00518 | 370 | alaDH alanine dehydrogenase. The family of known L | 96.6 | |
| cd01485 | 198 | E1-1_like Ubiquitin activating enzyme (E1), repeat | 96.59 | |
| PRK15057 | 388 | UDP-glucose 6-dehydrogenase; Provisional | 96.59 | |
| PLN02383 | 344 | aspartate semialdehyde dehydrogenase | 96.58 | |
| cd01489 | 312 | Uba2_SUMO Ubiquitin activating enzyme (E1) subunit | 96.58 | |
| PF02558 | 151 | ApbA: Ketopantoate reductase PanE/ApbA; InterPro: | 96.58 | |
| PRK08762 | 376 | molybdopterin biosynthesis protein MoeB; Validated | 96.56 | |
| PRK05600 | 370 | thiamine biosynthesis protein ThiF; Validated | 96.56 | |
| COG1893 | 307 | ApbA Ketopantoate reductase [Coenzyme metabolism] | 96.54 | |
| cd00401 | 413 | AdoHcyase S-adenosyl-L-homocysteine hydrolase (Ado | 96.52 | |
| PRK07502 | 307 | cyclohexadienyl dehydrogenase; Validated | 96.51 | |
| PLN02688 | 266 | pyrroline-5-carboxylate reductase | 96.47 | |
| cd00704 | 323 | MDH Malate dehydrogenase. Malate dehydrogenase (MD | 96.47 | |
| PRK08644 | 212 | thiamine biosynthesis protein ThiF; Provisional | 96.47 | |
| KOG0172 | 445 | consensus Lysine-ketoglutarate reductase/saccharop | 96.46 | |
| cd01484 | 234 | E1-2_like Ubiquitin activating enzyme (E1), repeat | 96.46 | |
| cd01487 | 174 | E1_ThiF_like E1_ThiF_like. Member of superfamily o | 96.46 | |
| PRK06719 | 157 | precorrin-2 dehydrogenase; Validated | 96.45 | |
| PF01113 | 124 | DapB_N: Dihydrodipicolinate reductase, N-terminus; | 96.44 | |
| PRK06718 | 202 | precorrin-2 dehydrogenase; Reviewed | 96.44 | |
| PRK08057 | 248 | cobalt-precorrin-6x reductase; Reviewed | 96.44 | |
| cd05291 | 306 | HicDH_like L-2-hydroxyisocapronate dehydrogenases | 96.43 | |
| PRK07066 | 321 | 3-hydroxybutyryl-CoA dehydrogenase; Validated | 96.42 | |
| TIGR01505 | 291 | tartro_sem_red 2-hydroxy-3-oxopropionate reductase | 96.41 | |
| PLN00203 | 519 | glutamyl-tRNA reductase | 96.41 | |
| COG0604 | 326 | Qor NADPH:quinone reductase and related Zn-depende | 96.4 | |
| PRK06130 | 311 | 3-hydroxybutyryl-CoA dehydrogenase; Validated | 96.39 | |
| PRK14619 | 308 | NAD(P)H-dependent glycerol-3-phosphate dehydrogena | 96.38 | |
| PRK15182 | 425 | Vi polysaccharide biosynthesis protein TviB; Provi | 96.37 | |
| PRK09424 | 509 | pntA NAD(P) transhydrogenase subunit alpha; Provis | 96.34 | |
| PF00070 | 80 | Pyr_redox: Pyridine nucleotide-disulphide oxidored | 96.34 | |
| PRK10537 | 393 | voltage-gated potassium channel; Provisional | 96.31 | |
| PRK00066 | 315 | ldh L-lactate dehydrogenase; Reviewed | 96.3 | |
| PRK07411 | 390 | hypothetical protein; Validated | 96.29 | |
| TIGR00521 | 390 | coaBC_dfp phosphopantothenoylcysteine decarboxylas | 96.29 | |
| PF02737 | 180 | 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD bind | 96.29 | |
| TIGR01019 | 286 | sucCoAalpha succinyl-CoA synthetase, alpha subunit | 96.28 | |
| COG0287 | 279 | TyrA Prephenate dehydrogenase [Amino acid transpor | 96.27 | |
| PRK06019 | 372 | phosphoribosylaminoimidazole carboxylase ATPase su | 96.26 | |
| PRK12490 | 299 | 6-phosphogluconate dehydrogenase-like protein; Rev | 96.26 | |
| PRK06249 | 313 | 2-dehydropantoate 2-reductase; Provisional | 96.25 | |
| PRK08293 | 287 | 3-hydroxybutyryl-CoA dehydrogenase; Validated | 96.25 | |
| PF00670 | 162 | AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase | 96.22 | |
| TIGR01850 | 346 | argC N-acetyl-gamma-glutamyl-phosphate reductase, | 96.2 | |
| cd05292 | 308 | LDH_2 A subgroup of L-lactate dehydrogenases. L-la | 96.18 | |
| PRK14851 | 679 | hypothetical protein; Provisional | 96.17 | |
| PRK05708 | 305 | 2-dehydropantoate 2-reductase; Provisional | 96.16 | |
| PF13241 | 103 | NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_ | 96.15 | |
| TIGR00507 | 270 | aroE shikimate 5-dehydrogenase. This model finds p | 96.12 | |
| PRK05808 | 282 | 3-hydroxybutyryl-CoA dehydrogenase; Validated | 96.1 | |
| PRK13940 | 414 | glutamyl-tRNA reductase; Provisional | 96.1 | |
| TIGR01035 | 417 | hemA glutamyl-tRNA reductase. This enzyme, togethe | 96.07 | |
| PRK07574 | 385 | formate dehydrogenase; Provisional | 96.07 | |
| KOG1198 | 347 | consensus Zinc-binding oxidoreductase [Energy prod | 96.06 | |
| PLN02256 | 304 | arogenate dehydrogenase | 96.05 | |
| PRK07679 | 279 | pyrroline-5-carboxylate reductase; Reviewed | 96.05 | |
| PRK09880 | 343 | L-idonate 5-dehydrogenase; Provisional | 96.04 | |
| PRK05476 | 425 | S-adenosyl-L-homocysteine hydrolase; Provisional | 96.04 | |
| TIGR02825 | 325 | B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15 | 96.04 | |
| TIGR01470 | 205 | cysG_Nterm siroheme synthase, N-terminal domain. T | 96.04 | |
| PRK14852 | 989 | hypothetical protein; Provisional | 96.04 | |
| cd00755 | 231 | YgdL_like Family of activating enzymes (E1) of ubi | 96.02 | |
| PRK13403 | 335 | ketol-acid reductoisomerase; Provisional | 96.01 | |
| TIGR02114 | 227 | coaB_strep phosphopantothenate--cysteine ligase, s | 96.01 | |
| cd08295 | 338 | double_bond_reductase_like Arabidopsis alkenal dou | 96.01 | |
| KOG4022 | 236 | consensus Dihydropteridine reductase DHPR/QDPR [Am | 96.0 | |
| PTZ00142 | 470 | 6-phosphogluconate dehydrogenase; Provisional | 96.0 | |
| PRK15469 | 312 | ghrA bifunctional glyoxylate/hydroxypyruvate reduc | 95.99 | |
| PRK06545 | 359 | prephenate dehydrogenase; Validated | 95.98 | |
| PRK12491 | 272 | pyrroline-5-carboxylate reductase; Reviewed | 95.98 | |
| PLN02350 | 493 | phosphogluconate dehydrogenase (decarboxylating) | 95.97 | |
| cd05213 | 311 | NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain | 95.94 | |
| TIGR01809 | 282 | Shik-DH-AROM shikimate-5-dehydrogenase, fungal ARO | 95.94 | |
| PRK12549 | 284 | shikimate 5-dehydrogenase; Reviewed | 95.93 | |
| PF01262 | 168 | AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal | 95.91 | |
| TIGR03840 | 213 | TMPT_Se_Te thiopurine S-methyltransferase, Se/Te d | 95.9 | |
| cd08294 | 329 | leukotriene_B4_DH_like 13-PGR is a bifunctional en | 95.89 | |
| PTZ00082 | 321 | L-lactate dehydrogenase; Provisional | 95.89 | |
| KOG0409 | 327 | consensus Predicted dehydrogenase [General functio | 95.88 | |
| cd08259 | 332 | Zn_ADH5 Alcohol dehydrogenases of the MDR family. | 95.88 | |
| PRK13243 | 333 | glyoxylate reductase; Reviewed | 95.88 | |
| PRK00045 | 423 | hemA glutamyl-tRNA reductase; Reviewed | 95.86 | |
| cd05294 | 309 | LDH-like_MDH_nadp A lactate dehydrogenases-like st | 95.8 | |
| cd01080 | 168 | NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of | 95.8 | |
| COG2084 | 286 | MmsB 3-hydroxyisobutyrate dehydrogenase and relate | 95.8 | |
| PRK06849 | 389 | hypothetical protein; Provisional | 95.77 | |
| PLN03139 | 386 | formate dehydrogenase; Provisional | 95.76 | |
| PRK09599 | 301 | 6-phosphogluconate dehydrogenase-like protein; Rev | 95.75 | |
| PRK09288 | 395 | purT phosphoribosylglycinamide formyltransferase 2 | 95.74 | |
| TIGR02717 | 447 | AcCoA-syn-alpha acetyl coenzyme A synthetase (ADP | 95.74 | |
| PRK15116 | 268 | sulfur acceptor protein CsdL; Provisional | 95.73 | |
| TIGR00978 | 341 | asd_EA aspartate-semialdehyde dehydrogenase (non-p | 95.73 | |
| COG2130 | 340 | Putative NADP-dependent oxidoreductases [General f | 95.72 | |
| cd01488 | 291 | Uba3_RUB Ubiquitin activating enzyme (E1) subunit | 95.71 | |
| cd01491 | 286 | Ube1_repeat1 Ubiquitin activating enzyme (E1), rep | 95.7 | |
| COG1255 | 129 | Uncharacterized protein conserved in archaea [Func | 95.69 | |
| cd08230 | 355 | glucose_DH Glucose dehydrogenase. Glucose dehydrog | 95.67 | |
| PRK08655 | 437 | prephenate dehydrogenase; Provisional | 95.66 | |
| PTZ00075 | 476 | Adenosylhomocysteinase; Provisional | 95.65 | |
| PRK09260 | 288 | 3-hydroxybutyryl-CoA dehydrogenase; Validated | 95.63 | |
| TIGR00936 | 406 | ahcY adenosylhomocysteinase. This enzyme hydrolyze | 95.62 | |
| cd08293 | 345 | PTGR2 Prostaglandin reductase. Prostaglandins and | 95.61 | |
| PRK06436 | 303 | glycerate dehydrogenase; Provisional | 95.61 | |
| PRK08261 | 450 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 95.61 | |
| PLN02494 | 477 | adenosylhomocysteinase | 95.6 | |
| PRK07819 | 286 | 3-hydroxybutyryl-CoA dehydrogenase; Validated | 95.57 | |
| PRK07530 | 292 | 3-hydroxybutyryl-CoA dehydrogenase; Validated | 95.57 | |
| cd01337 | 310 | MDH_glyoxysomal_mitochondrial Glyoxysomal and mito | 95.56 | |
| PRK14194 | 301 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 95.54 | |
| KOG2013 | 603 | consensus SMT3/SUMO-activating complex, catalytic | 95.51 | |
| PRK13302 | 271 | putative L-aspartate dehydrogenase; Provisional | 95.5 | |
| cd08253 | 325 | zeta_crystallin Zeta-crystallin with NADP-dependen | 95.47 | |
| PRK05678 | 291 | succinyl-CoA synthetase subunit alpha; Validated | 95.47 | |
| COG0240 | 329 | GpsA Glycerol-3-phosphate dehydrogenase [Energy pr | 95.46 | |
| PRK14620 | 326 | NAD(P)H-dependent glycerol-3-phosphate dehydrogena | 95.44 | |
| PRK15059 | 292 | tartronate semialdehyde reductase; Provisional | 95.44 |
| >COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-46 Score=312.20 Aligned_cols=288 Identities=16% Similarity=0.179 Sum_probs=235.8
Q ss_pred CeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCch-hhhhhhhCCceEEEccCChhhH--Hhh--ccCceeeEEEEecCC
Q 017914 60 NRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVM-KKKELEQSGFDVHLFNANETAL--MIL--TTLKNYTHLLVSIPP 133 (364)
Q Consensus 60 ~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~-~~~~l~~~~~~~~~~D~~~~~~--~~~--~~~d~v~~~~~~~~~ 133 (364)
|+||||| +||||+|.+.+|++.|++|++++.-.. ....+....+.++.+|+.|.+. +.+ ..+|+|+|+|+....
T Consensus 1 ~~iLVtGGAGYIGSHtv~~Ll~~G~~vvV~DNL~~g~~~~v~~~~~~f~~gDi~D~~~L~~vf~~~~idaViHFAa~~~V 80 (329)
T COG1087 1 MKVLVTGGAGYIGSHTVRQLLKTGHEVVVLDNLSNGHKIALLKLQFKFYEGDLLDRALLTAVFEENKIDAVVHFAASISV 80 (329)
T ss_pred CeEEEecCcchhHHHHHHHHHHCCCeEEEEecCCCCCHHHhhhccCceEEeccccHHHHHHHHHhcCCCEEEECcccccc
Confidence 6899998 999999999999999999999998433 3333432226899999999774 444 578999999999998
Q ss_pred CCCCCChhhhHH------HHHHHHhhcCCccEEEEEccceeecCCCCccccCCCCCCCCChhHHHHHHHHHHHHHhhhhc
Q 017914 134 LEGTGDPMLKHG------ELLRSTLMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANPTTELGRLRLSAEKGWLNLGRDL 207 (364)
Q Consensus 134 ~~~~~~~~~~~~------~~l~~a~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~~sK~~~E~~~~~~~~~~ 207 (364)
.++..+|...+. .++++++++.++++|||.||+.|||.+...|++|+.+..|.++||+||+..|++++.+++..
T Consensus 81 gESv~~Pl~Yy~NNv~gTl~Ll~am~~~gv~~~vFSStAavYG~p~~~PI~E~~~~~p~NPYG~sKlm~E~iL~d~~~a~ 160 (329)
T COG1087 81 GESVQNPLKYYDNNVVGTLNLIEAMLQTGVKKFIFSSTAAVYGEPTTSPISETSPLAPINPYGRSKLMSEEILRDAAKAN 160 (329)
T ss_pred chhhhCHHHHHhhchHhHHHHHHHHHHhCCCEEEEecchhhcCCCCCcccCCCCCCCCCCcchhHHHHHHHHHHHHHHhC
Confidence 888887766554 56778888999999999999999999999999999999999999999999999999999999
Q ss_pred CCcEEEEEecceecCCCC------------hHHHHHHh-----cCcc-cc--cccccCCcccccccHHHHHHHHHHHccC
Q 017914 208 GISAQVFRLGGIYGPGRS------------SVDTIIKQ-----LPLS-EG--QKMRRARQYTSRIHVDDICQVLSASIDK 267 (364)
Q Consensus 208 ~~~~~ilRp~~v~g~~~~------------~~~~~~~~-----~~~~-~~--~~~~~~~~~~~~i~v~Dva~~~~~~l~~ 267 (364)
+++++++|..++.|.... .+..+++. ..+. .+ -+..+|.-.||||||.|+|++++.+++.
T Consensus 161 ~~~~v~LRYFN~aGA~~~G~iGe~~~~~thLip~~~q~A~G~r~~l~ifG~DY~T~DGT~iRDYIHV~DLA~aH~~Al~~ 240 (329)
T COG1087 161 PFKVVILRYFNVAGACPDGTLGQRYPGATLLIPVAAEAALGKRDKLFIFGDDYDTKDGTCIRDYIHVDDLADAHVLALKY 240 (329)
T ss_pred CCcEEEEEecccccCCCCCccCCCCCCcchHHHHHHHHHhcCCceeEEeCCCCCCCCCCeeeeeeehhHHHHHHHHHHHH
Confidence 999999999999986521 23333322 1111 22 2234677889999999999999999875
Q ss_pred CC-C--CceEEEeCCCCCCHHHHHHHHHHHhcCCCCCcccCCCCCCCCCCCccCCCCCCCeEEEchhHHHhcCcccCCCC
Q 017914 268 PS-A--WNVYNVVDDDPAPREEVFAYAWDLVEKKWPGLLKHRKPRENTESSNEKGSSRGEKRVSNVRMKKELGVRLWHPS 344 (364)
Q Consensus 268 ~~-~--g~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~ 344 (364)
-. . .++||+++|...|..|+++.++++.|+++|..+.. .....+..+..|++|++++|||+|++++
T Consensus 241 L~~~g~~~~~NLG~G~G~SV~evi~a~~~vtg~~ip~~~~~-----------RR~GDpa~l~Ad~~kA~~~Lgw~p~~~~ 309 (329)
T COG1087 241 LKEGGSNNIFNLGSGNGFSVLEVIEAAKKVTGRDIPVEIAP-----------RRAGDPAILVADSSKARQILGWQPTYDD 309 (329)
T ss_pred HHhCCceeEEEccCCCceeHHHHHHHHHHHhCCcCceeeCC-----------CCCCCCceeEeCHHHHHHHhCCCcccCC
Confidence 32 2 25999999999999999999999999987643322 1233445578899999999999999999
Q ss_pred HHHHHHHHHHHhcc
Q 017914 345 YKSGLQSIINQMDQ 358 (364)
Q Consensus 345 ~~e~l~~~~~~~~~ 358 (364)
+++.+++..+|.++
T Consensus 310 L~~ii~~aw~W~~~ 323 (329)
T COG1087 310 LEDIIKDAWDWHQQ 323 (329)
T ss_pred HHHHHHHHHHHhhh
Confidence 99999999999984
|
|
| >COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-44 Score=302.02 Aligned_cols=291 Identities=18% Similarity=0.225 Sum_probs=235.8
Q ss_pred CeEEEEc-CChhhHHHHHHHHhCC--CEEEEEEe-----Cchhhhhhhh-CCceEEEccCChhhH--Hhhc--cCceeeE
Q 017914 60 NRMLILG-MGFVGRIFAEKIKNQG--WVVSGTCT-----NVMKKKELEQ-SGFDVHLFNANETAL--MILT--TLKNYTH 126 (364)
Q Consensus 60 ~~vlVtG-tG~iG~~l~~~L~~~g--~~V~~~~r-----~~~~~~~l~~-~~~~~~~~D~~~~~~--~~~~--~~d~v~~ 126 (364)
|++|||| +||||++++++++++. .+|+.++. +.+....+.. ++..++++|+.|.+. ..+. .+|+|+|
T Consensus 1 ~~iLVTGGaGFIGsnfvr~~~~~~~d~~v~~~DkLTYAgn~~~l~~~~~~~~~~fv~~DI~D~~~v~~~~~~~~~D~Vvh 80 (340)
T COG1088 1 MKILVTGGAGFIGSNFVRYILNKHPDDHVVNLDKLTYAGNLENLADVEDSPRYRFVQGDICDRELVDRLFKEYQPDAVVH 80 (340)
T ss_pred CcEEEecCcchHHHHHHHHHHhcCCCceEEEEecccccCCHHHHHhhhcCCCceEEeccccCHHHHHHHHHhcCCCeEEE
Confidence 6899998 9999999999999985 45787776 2333333333 589999999999775 5555 5899999
Q ss_pred EEEecCCCCCCCChhh------hHHHHHHHHhhcCCc-cEEEEEccceeecCCCCc--cccCCCCCCCCChhHHHHHHHH
Q 017914 127 LLVSIPPLEGTGDPML------KHGELLRSTLMNGHL-QWLGYLSSTGVYGHSGGA--WVDEDYPANPTTELGRLRLSAE 197 (364)
Q Consensus 127 ~~~~~~~~~~~~~~~~------~~~~~l~~a~~~~~~-~r~v~~Ss~~vy~~~~~~--~~~E~~~~~~~~~Y~~sK~~~E 197 (364)
+|+-.+...+..+|.. .++.++++++++... .||+++||..|||+.... .++|.+|..|.++|+.||+.++
T Consensus 81 fAAESHVDRSI~~P~~Fi~TNv~GT~~LLEaar~~~~~frf~HISTDEVYG~l~~~~~~FtE~tp~~PsSPYSASKAasD 160 (340)
T COG1088 81 FAAESHVDRSIDGPAPFIQTNVVGTYTLLEAARKYWGKFRFHHISTDEVYGDLGLDDDAFTETTPYNPSSPYSASKAASD 160 (340)
T ss_pred echhccccccccChhhhhhcchHHHHHHHHHHHHhcccceEEEeccccccccccCCCCCcccCCCCCCCCCcchhhhhHH
Confidence 9999888777666544 334577888887765 389999999999976543 6999999999999999999999
Q ss_pred HHHHHhhhhcCCcEEEEEecceecCCCC---hHHHHHHhcCccc-ccccccCCcccccccHHHHHHHHHHHccCCCCCce
Q 017914 198 KGWLNLGRDLGISAQVFRLGGIYGPGRS---SVDTIIKQLPLSE-GQKMRRARQYTSRIHVDDICQVLSASIDKPSAWNV 273 (364)
Q Consensus 198 ~~~~~~~~~~~~~~~ilRp~~v~g~~~~---~~~~~~~~~~~~~-~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~~g~~ 273 (364)
.++++|.+.+|++++|.|+++-|||.+- +++.++...-.+. ....|+|.+.+||+||+|-++|+..++.+...|++
T Consensus 161 ~lVray~~TYglp~~ItrcSNNYGPyqfpEKlIP~~I~nal~g~~lpvYGdG~~iRDWl~VeDh~~ai~~Vl~kg~~GE~ 240 (340)
T COG1088 161 LLVRAYVRTYGLPATITRCSNNYGPYQFPEKLIPLMIINALLGKPLPVYGDGLQIRDWLYVEDHCRAIDLVLTKGKIGET 240 (340)
T ss_pred HHHHHHHHHcCCceEEecCCCCcCCCcCchhhhHHHHHHHHcCCCCceecCCcceeeeEEeHhHHHHHHHHHhcCcCCce
Confidence 9999999999999999999999999853 4555444422222 23458899999999999999999999999999999
Q ss_pred EEEeCCCCCCHHHHHHHHHHHhcCCCCC---cccCCCCCCCCCCCccCCCCCCCeEEEchhHHHhcCcccCCCCHHHHHH
Q 017914 274 YNVVDDDPAPREEVFAYAWDLVEKKWPG---LLKHRKPRENTESSNEKGSSRGEKRVSNVRMKKELGVRLWHPSYKSGLQ 350 (364)
Q Consensus 274 ~~i~~~~~~s~~el~~~i~~~~g~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~e~l~ 350 (364)
|||+++...+..|+++.|++.+|+..+. .+.+.. -.+.-...+.+|.+|++++|||+|++ +|+++|+
T Consensus 241 YNIgg~~E~~Nlevv~~i~~~l~~~~~~~~~li~~V~---------DRpGHD~RYaid~~Ki~~eLgW~P~~-~fe~Glr 310 (340)
T COG1088 241 YNIGGGNERTNLEVVKTICELLGKDKPDYRDLITFVE---------DRPGHDRRYAIDASKIKRELGWRPQE-TFETGLR 310 (340)
T ss_pred EEeCCCccchHHHHHHHHHHHhCccccchhhheEecc---------CCCCCccceeechHHHhhhcCCCcCC-CHHHHHH
Confidence 9999999999999999999999987553 222200 01122333679999999999999998 8999999
Q ss_pred HHHHHhcccC
Q 017914 351 SIINQMDQPY 360 (364)
Q Consensus 351 ~~~~~~~~~~ 360 (364)
++++||.+|.
T Consensus 311 kTv~WY~~N~ 320 (340)
T COG1088 311 KTVDWYLDNE 320 (340)
T ss_pred HHHHHHHhch
Confidence 9999999875
|
|
| >PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-43 Score=319.92 Aligned_cols=297 Identities=15% Similarity=0.086 Sum_probs=225.4
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhh----hhh-------hCCceEEEccCChhhH--HhhccCc
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKK----ELE-------QSGFDVHLFNANETAL--MILTTLK 122 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~----~l~-------~~~~~~~~~D~~~~~~--~~~~~~d 122 (364)
..+|+||||| |||||++|+++|+++|++|++++|...... .+. ..++.++.+|+.|.+. ..++++|
T Consensus 13 ~~~~~vlVtGatGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~~~~~~d 92 (348)
T PRK15181 13 LAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDIRKFTDCQKACKNVD 92 (348)
T ss_pred ccCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCcchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhhCCC
Confidence 3458999999 999999999999999999999998543211 110 1357789999999763 6678899
Q ss_pred eeeEEEEecCCCCCCCC------hhhhHHHHHHHHhhcCCccEEEEEccceeecCCCCccccCCCCCCCCChhHHHHHHH
Q 017914 123 NYTHLLVSIPPLEGTGD------PMLKHGELLRSTLMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANPTTELGRLRLSA 196 (364)
Q Consensus 123 ~v~~~~~~~~~~~~~~~------~~~~~~~~l~~a~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~~sK~~~ 196 (364)
.|+|+|+.........+ .....+.|+++++++.++++|||+||.++||.....+..|+.+..|.++|+.+|..+
T Consensus 93 ~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~v~~SS~~vyg~~~~~~~~e~~~~~p~~~Y~~sK~~~ 172 (348)
T PRK15181 93 YVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDAHVSSFTYAASSSTYGDHPDLPKIEERIGRPLSPYAVTKYVN 172 (348)
T ss_pred EEEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeechHhhCCCCCCCCCCCCCCCCCChhhHHHHHH
Confidence 99999986544333233 233456788999998999999999999999976666778888888999999999999
Q ss_pred HHHHHHhhhhcCCcEEEEEecceecCCCC-------hHHHHHHhcCccc-ccccccCCcccccccHHHHHHHHHHHccCC
Q 017914 197 EKGWLNLGRDLGISAQVFRLGGIYGPGRS-------SVDTIIKQLPLSE-GQKMRRARQYTSRIHVDDICQVLSASIDKP 268 (364)
Q Consensus 197 E~~~~~~~~~~~~~~~ilRp~~v~g~~~~-------~~~~~~~~~~~~~-~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~ 268 (364)
|.+++.+.+..+++++++||+++||+++. .+..++....... ....++|.+.++|+|++|+|++++.++...
T Consensus 173 e~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~~~~~i~~~~~~~~~~~~i~~~g~g~~~rd~i~v~D~a~a~~~~~~~~ 252 (348)
T PRK15181 173 ELYADVFARSYEFNAIGLRYFNVFGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIENVIQANLLSATTN 252 (348)
T ss_pred HHHHHHHHHHhCCCEEEEEecceeCcCCCCCCccccCHHHHHHHHHcCCCcEEeCCCCceEeeEEHHHHHHHHHHHHhcc
Confidence 99999988888999999999999999642 2344443311111 123467889999999999999998877543
Q ss_pred ---CCCceEEEeCCCCCCHHHHHHHHHHHhcCCCCCcccCCCCCCCCCCCccCCCCCCCeEEEchhHHHhcCcccCCCCH
Q 017914 269 ---SAWNVYNVVDDDPAPREEVFAYAWDLVEKKWPGLLKHRKPRENTESSNEKGSSRGEKRVSNVRMKKELGVRLWHPSY 345 (364)
Q Consensus 269 ---~~g~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~ 345 (364)
..+++||+++++.+|++|+++.+.+.++......... . +..............+|++|++++|||+|++ ++
T Consensus 253 ~~~~~~~~yni~~g~~~s~~e~~~~i~~~~~~~~~~~~~~-~----~~~~~~~~~~~~~~~~d~~k~~~~lGw~P~~-sl 326 (348)
T PRK15181 253 DLASKNKVYNVAVGDRTSLNELYYLIRDGLNLWRNEQSRA-E----PIYKDFRDGDVKHSQADITKIKTFLSYEPEF-DI 326 (348)
T ss_pred cccCCCCEEEecCCCcEeHHHHHHHHHHHhCcccccccCC-C----cccCCCCCCcccccccCHHHHHHHhCCCCCC-CH
Confidence 2468999999999999999999999987431100000 0 0000011122334678999999999999999 89
Q ss_pred HHHHHHHHHHhccc
Q 017914 346 KSGLQSIINQMDQP 359 (364)
Q Consensus 346 ~e~l~~~~~~~~~~ 359 (364)
+|+|+++++|++.+
T Consensus 327 ~egl~~~~~w~~~~ 340 (348)
T PRK15181 327 KEGLKQTLKWYIDK 340 (348)
T ss_pred HHHHHHHHHHHHHh
Confidence 99999999999865
|
|
| >PLN02427 UDP-apiose/xylose synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-40 Score=309.06 Aligned_cols=301 Identities=15% Similarity=0.152 Sum_probs=214.6
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhC-CCEEEEEEeCchhhhhhh-------hCCceEEEccCChhhH--HhhccCceee
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQ-GWVVSGTCTNVMKKKELE-------QSGFDVHLFNANETAL--MILTTLKNYT 125 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~l~-------~~~~~~~~~D~~~~~~--~~~~~~d~v~ 125 (364)
...|+||||| |||||++|+++|+++ |++|++++|+..+...+. ..+++++.+|++|.+. .++.++|+|+
T Consensus 12 ~~~~~VlVTGgtGfIGs~lv~~L~~~~g~~V~~l~r~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~d~Vi 91 (386)
T PLN02427 12 IKPLTICMIGAGGFIGSHLCEKLMTETPHKVLALDVYNDKIKHLLEPDTVPWSGRIQFHRINIKHDSRLEGLIKMADLTI 91 (386)
T ss_pred ccCcEEEEECCcchHHHHHHHHHHhcCCCEEEEEecCchhhhhhhccccccCCCCeEEEEcCCCChHHHHHHhhcCCEEE
Confidence 3447999998 999999999999998 599999998765543322 1368899999999764 6678899999
Q ss_pred EEEEecCCCCCCCChh------hhHHHHHHHHhhcCCccEEEEEccceeecCCCCccccCCCCC----------------
Q 017914 126 HLLVSIPPLEGTGDPM------LKHGELLRSTLMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPA---------------- 183 (364)
Q Consensus 126 ~~~~~~~~~~~~~~~~------~~~~~~l~~a~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~---------------- 183 (364)
|+|+.........++. .....|+++++++.+ +||||+||..+||.....+++|+.+.
T Consensus 92 HlAa~~~~~~~~~~~~~~~~~n~~gt~~ll~aa~~~~-~r~v~~SS~~vYg~~~~~~~~e~~p~~~~~~~~~~~e~~~~~ 170 (386)
T PLN02427 92 NLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN-KRLIHFSTCEVYGKTIGSFLPKDHPLRQDPAFYVLKEDESPC 170 (386)
T ss_pred EcccccChhhhhhChHHHHHHHHHHHHHHHHHHHhcC-CEEEEEeeeeeeCCCcCCCCCccccccccccccccccccccc
Confidence 9998654322222222 223456777777766 89999999999997544344443321
Q ss_pred ------CCCChhHHHHHHHHHHHHHhhhhcCCcEEEEEecceecCCCCh--------------HHHHHHhc-Cccccccc
Q 017914 184 ------NPTTELGRLRLSAEKGWLNLGRDLGISAQVFRLGGIYGPGRSS--------------VDTIIKQL-PLSEGQKM 242 (364)
Q Consensus 184 ------~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilRp~~v~g~~~~~--------------~~~~~~~~-~~~~~~~~ 242 (364)
.+.+.|+.+|.++|++++.+++.++++++++||+++||++... +..+.... .-......
T Consensus 171 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 250 (386)
T PLN02427 171 IFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRREPLKLV 250 (386)
T ss_pred ccCCCCccccchHHHHHHHHHHHHHHHhhcCCceEEecccceeCCCCCccccccccccccchHHHHHHHHHhcCCCeEEE
Confidence 2346799999999999999888889999999999999997421 11121111 11111233
Q ss_pred ccCCcccccccHHHHHHHHHHHccCCC--CCceEEEeCC-CCCCHHHHHHHHHHHhcCCCCCc---ccCCCCCCCCCCCc
Q 017914 243 RRARQYTSRIHVDDICQVLSASIDKPS--AWNVYNVVDD-DPAPREEVFAYAWDLVEKKWPGL---LKHRKPRENTESSN 316 (364)
Q Consensus 243 ~~~~~~~~~i~v~Dva~~~~~~l~~~~--~g~~~~i~~~-~~~s~~el~~~i~~~~g~~~~~~---~~~~~~~~~~~~~~ 316 (364)
+.+++.++|||++|+|++++.+++++. .|++||++++ +.++++|+++.+.+.+|...... ........ .....
T Consensus 251 g~g~~~r~~i~V~Dva~ai~~al~~~~~~~g~~yni~~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~-~~~~~ 329 (386)
T PLN02427 251 DGGQSQRTFVYIKDAIEAVLLMIENPARANGHIFNVGNPNNEVTVRQLAEMMTEVYAKVSGEPALEEPTVDVSS-KEFYG 329 (386)
T ss_pred CCCCceECcEeHHHHHHHHHHHHhCcccccCceEEeCCCCCCccHHHHHHHHHHHhccccccccccccccccCc-ccccC
Confidence 567888999999999999999998763 4789999997 58999999999999998531110 00000000 00000
Q ss_pred cCCCCCCCeEEEchhHHHhcCcccCCCCHHHHHHHHHHHhcccC
Q 017914 317 EKGSSRGEKRVSNVRMKKELGVRLWHPSYKSGLQSIINQMDQPY 360 (364)
Q Consensus 317 ~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~e~l~~~~~~~~~~~ 360 (364)
...........|.+|++++|||+|++ +++++|+++++|+++.+
T Consensus 330 ~~~~~~~~~~~d~~k~~~~lGw~p~~-~l~~gl~~~~~~~~~~~ 372 (386)
T PLN02427 330 EGYDDSDKRIPDMTIINKQLGWNPKT-SLWDLLESTLTYQHKTY 372 (386)
T ss_pred ccccchhhccCCHHHHHHhcCCCcCc-cHHHHHHHHHHHHHHHH
Confidence 00112234567999999999999999 89999999999998865
|
|
| >KOG0747 consensus Putative NAD+-dependent epimerases [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-41 Score=279.50 Aligned_cols=295 Identities=20% Similarity=0.274 Sum_probs=231.7
Q ss_pred CeEEEEc-CChhhHHHHHHHHhC--CCEEEEEEe-----Cchhhhh-hhhCCceEEEccCChhhH--Hh--hccCceeeE
Q 017914 60 NRMLILG-MGFVGRIFAEKIKNQ--GWVVSGTCT-----NVMKKKE-LEQSGFDVHLFNANETAL--MI--LTTLKNYTH 126 (364)
Q Consensus 60 ~~vlVtG-tG~iG~~l~~~L~~~--g~~V~~~~r-----~~~~~~~-l~~~~~~~~~~D~~~~~~--~~--~~~~d~v~~ 126 (364)
++||||| +||||++.+..+..+ .++.+.++. +....+. ..+++.+++.+|+.+... .. -..+|.|+|
T Consensus 7 ~~vlItgg~gfi~Sn~~~~~~~~~p~~~~v~idkL~~~s~~~~l~~~~n~p~ykfv~~di~~~~~~~~~~~~~~id~vih 86 (331)
T KOG0747|consen 7 KNVLITGGAGFIGSNFINYLVDKYPDYKFVNLDKLDYCSNLKNLEPVRNSPNYKFVEGDIADADLVLYLFETEEIDTVIH 86 (331)
T ss_pred ceEEEecCcCcchhhhhhhcccCCCCCcEEEEeecccccccchhhhhccCCCceEeeccccchHHHHhhhccCchhhhhh
Confidence 7999998 999999999999987 466666554 2111111 123678999999998664 22 267899999
Q ss_pred EEEecCCCCCCCChhhhHH------HHHHHHhhc-CCccEEEEEccceeecCCCCcccc-CCCCCCCCChhHHHHHHHHH
Q 017914 127 LLVSIPPLEGTGDPMLKHG------ELLRSTLMN-GHLQWLGYLSSTGVYGHSGGAWVD-EDYPANPTTELGRLRLSAEK 198 (364)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~~------~~l~~a~~~-~~~~r~v~~Ss~~vy~~~~~~~~~-E~~~~~~~~~Y~~sK~~~E~ 198 (364)
.|+......++.++..... .+++++++. .++++|||+||..|||.+...+.. |.+.+.|.++|+.+|+++|.
T Consensus 87 faa~t~vd~s~~~~~~~~~nnil~t~~Lle~~~~sg~i~~fvhvSTdeVYGds~~~~~~~E~s~~nPtnpyAasKaAaE~ 166 (331)
T KOG0747|consen 87 FAAQTHVDRSFGDSFEFTKNNILSTHVLLEAVRVSGNIRRFVHVSTDEVYGDSDEDAVVGEASLLNPTNPYAASKAAAEM 166 (331)
T ss_pred hHhhhhhhhhcCchHHHhcCCchhhhhHHHHHHhccCeeEEEEecccceecCccccccccccccCCCCCchHHHHHHHHH
Confidence 9998887766655554333 345555554 479999999999999999888877 99999999999999999999
Q ss_pred HHHHhhhhcCCcEEEEEecceecCCCCh---HHHHHH-hcCcccccccccCCcccccccHHHHHHHHHHHccCCCCCceE
Q 017914 199 GWLNLGRDLGISAQVFRLGGIYGPGRSS---VDTIIK-QLPLSEGQKMRRARQYTSRIHVDDICQVLSASIDKPSAWNVY 274 (364)
Q Consensus 199 ~~~~~~~~~~~~~~ilRp~~v~g~~~~~---~~~~~~-~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~~g~~~ 274 (364)
.+++|.+.++++++++|.++||||++.. +.+++. .........-|+|.+.++|+|++|+++++..++++...|++|
T Consensus 167 ~v~Sy~~sy~lpvv~~R~nnVYGP~q~~~klipkFi~l~~~~~~~~i~g~g~~~rs~l~veD~~ea~~~v~~Kg~~geIY 246 (331)
T KOG0747|consen 167 LVRSYGRSYGLPVVTTRMNNVYGPNQYPEKLIPKFIKLAMRGKEYPIHGDGLQTRSYLYVEDVSEAFKAVLEKGELGEIY 246 (331)
T ss_pred HHHHHhhccCCcEEEEeccCccCCCcChHHHhHHHHHHHHhCCCcceecCcccceeeEeHHHHHHHHHHHHhcCCcccee
Confidence 9999999999999999999999999765 344334 223334455588999999999999999999999998889999
Q ss_pred EEeCCCCCCHHHHHHHHHHHhcCCCCCcccCCCCCCCCCCCccCCCCCCCeEEEchhHHHhcCcccCCCCHHHHHHHHHH
Q 017914 275 NVVDDDPAPREEVFAYAWDLVEKKWPGLLKHRKPRENTESSNEKGSSRGEKRVSNVRMKKELGVRLWHPSYKSGLQSIIN 354 (364)
Q Consensus 275 ~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~e~l~~~~~ 354 (364)
||+...+.+..|+++.|.+.+++..+.....+-. ..-+-.+.....+.++.+|++ .|||+|++| |+++|+.+++
T Consensus 247 NIgtd~e~~~~~l~k~i~eli~~~~~~~~~~p~~----~~v~dRp~nd~Ry~~~~eKik-~LGw~~~~p-~~eGLrktie 320 (331)
T KOG0747|consen 247 NIGTDDEMRVIDLAKDICELFEKRLPNIDTEPFI----FFVEDRPYNDLRYFLDDEKIK-KLGWRPTTP-WEEGLRKTIE 320 (331)
T ss_pred eccCcchhhHHHHHHHHHHHHHHhccCCCCCCcc----eecCCCCcccccccccHHHHH-hcCCcccCc-HHHHHHHHHH
Confidence 9999999999999999999998765532221110 011112223344789999998 999999995 9999999999
Q ss_pred HhcccC
Q 017914 355 QMDQPY 360 (364)
Q Consensus 355 ~~~~~~ 360 (364)
|+.+++
T Consensus 321 ~y~~~~ 326 (331)
T KOG0747|consen 321 WYTKNF 326 (331)
T ss_pred HHHhhh
Confidence 999876
|
|
| >PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-40 Score=302.61 Aligned_cols=299 Identities=16% Similarity=0.192 Sum_probs=218.1
Q ss_pred CCeEEEEc-CChhhHHHHHHHHhC-CCEEEEEEeCchhhhhhh-hCCceEEEccCC-hhhH--HhhccCceeeEEEEecC
Q 017914 59 PNRMLILG-MGFVGRIFAEKIKNQ-GWVVSGTCTNVMKKKELE-QSGFDVHLFNAN-ETAL--MILTTLKNYTHLLVSIP 132 (364)
Q Consensus 59 ~~~vlVtG-tG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~l~-~~~~~~~~~D~~-~~~~--~~~~~~d~v~~~~~~~~ 132 (364)
||+||||| |||||++|+++|+++ |++|++++|+..+...+. ..+++++.+|++ +.++ ..++++|+|+|+++...
T Consensus 1 m~~ilVtGatGfiGs~l~~~L~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~d~ViH~aa~~~ 80 (347)
T PRK11908 1 MKKVLILGVNGFIGHHLSKRILETTDWEVYGMDMQTDRLGDLVNHPRMHFFEGDITINKEWIEYHVKKCDVILPLVAIAT 80 (347)
T ss_pred CcEEEEECCCcHHHHHHHHHHHhCCCCeEEEEeCcHHHHHHhccCCCeEEEeCCCCCCHHHHHHHHcCCCEEEECcccCC
Confidence 47899999 999999999999986 799999999765443332 246889999997 5443 56688999999998654
Q ss_pred CCCCCCChh------hhHHHHHHHHhhcCCccEEEEEccceeecCCCCccccCCCCC-------CCCChhHHHHHHHHHH
Q 017914 133 PLEGTGDPM------LKHGELLRSTLMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPA-------NPTTELGRLRLSAEKG 199 (364)
Q Consensus 133 ~~~~~~~~~------~~~~~~l~~a~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~-------~~~~~Y~~sK~~~E~~ 199 (364)
+.....++. ...+.|+++++++.+ ++|||+||..+||.....+++|+.+. .|.+.|+.+|.++|++
T Consensus 81 ~~~~~~~p~~~~~~n~~~~~~ll~aa~~~~-~~~v~~SS~~vyg~~~~~~~~ee~~~~~~~~~~~p~~~Y~~sK~~~e~~ 159 (347)
T PRK11908 81 PATYVKQPLRVFELDFEANLPIVRSAVKYG-KHLVFPSTSEVYGMCPDEEFDPEASPLVYGPINKPRWIYACSKQLMDRV 159 (347)
T ss_pred hHHhhcCcHHHHHHHHHHHHHHHHHHHhcC-CeEEEEecceeeccCCCcCcCccccccccCcCCCccchHHHHHHHHHHH
Confidence 332222322 344568888888777 79999999999997655566665431 4567899999999999
Q ss_pred HHHhhhhcCCcEEEEEecceecCCCC-----------hHHHHHHhcCcccc-cccccCCcccccccHHHHHHHHHHHccC
Q 017914 200 WLNLGRDLGISAQVFRLGGIYGPGRS-----------SVDTIIKQLPLSEG-QKMRRARQYTSRIHVDDICQVLSASIDK 267 (364)
Q Consensus 200 ~~~~~~~~~~~~~ilRp~~v~g~~~~-----------~~~~~~~~~~~~~~-~~~~~~~~~~~~i~v~Dva~~~~~~l~~ 267 (364)
++.+++..+++++++||+.+||++.. .+..++........ ...+.+++.++|||++|+|++++.++++
T Consensus 160 ~~~~~~~~~~~~~ilR~~~v~Gp~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~g~~~r~~i~v~D~a~a~~~~~~~ 239 (347)
T PRK11908 160 IWAYGMEEGLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGEPISLVDGGSQKRAFTDIDDGIDALMKIIEN 239 (347)
T ss_pred HHHHHHHcCCCeEEEeeeeeeCCCccCCCccccCCcchHHHHHHHHhCCCceEEecCCceeeccccHHHHHHHHHHHHhC
Confidence 99998888999999999999998742 23333332111111 2335678899999999999999999987
Q ss_pred CC---CCceEEEeCC-CCCCHHHHHHHHHHHhcCCCCCcccCC-CCCCCCCC-Ccc---CCCCCCCeEEEchhHHHhcCc
Q 017914 268 PS---AWNVYNVVDD-DPAPREEVFAYAWDLVEKKWPGLLKHR-KPRENTES-SNE---KGSSRGEKRVSNVRMKKELGV 338 (364)
Q Consensus 268 ~~---~g~~~~i~~~-~~~s~~el~~~i~~~~g~~~~~~~~~~-~~~~~~~~-~~~---~~~~~~~~~~d~~k~~~~lG~ 338 (364)
+. .|++||++++ ..+|++|+++.+.+.+|.. |...... ........ ... ..........|++|+++.|||
T Consensus 240 ~~~~~~g~~yni~~~~~~~s~~e~~~~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lGw 318 (347)
T PRK11908 240 KDGVASGKIYNIGNPKNNHSVRELANKMLELAAEY-PEYAESAKKVKLVETTSGAYYGKGYQDVQNRVPKIDNTMQELGW 318 (347)
T ss_pred ccccCCCCeEEeCCCCCCcCHHHHHHHHHHHhcCc-ccccccccccccccCCchhccCcCcchhccccCChHHHHHHcCC
Confidence 63 3789999987 4799999999999999864 3220000 00000000 000 011222345689999999999
Q ss_pred ccCCCCHHHHHHHHHHHhcccC
Q 017914 339 RLWHPSYKSGLQSIINQMDQPY 360 (364)
Q Consensus 339 ~p~~~~~~e~l~~~~~~~~~~~ 360 (364)
+|++ +++|+++++++|++++.
T Consensus 319 ~p~~-~l~~~l~~~~~~~~~~~ 339 (347)
T PRK11908 319 APKT-TMDDALRRIFEAYRGHV 339 (347)
T ss_pred CCCC-cHHHHHHHHHHHHHHHH
Confidence 9999 89999999999998654
|
|
| >PLN02166 dTDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-40 Score=307.93 Aligned_cols=287 Identities=17% Similarity=0.184 Sum_probs=219.0
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchh-hhh---h-hhCCceEEEccCChhhHHhhccCceeeEEEEe
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMK-KKE---L-EQSGFDVHLFNANETALMILTTLKNYTHLLVS 130 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~-~~~---l-~~~~~~~~~~D~~~~~~~~~~~~d~v~~~~~~ 130 (364)
...|+||||| |||||++|+++|+++|++|++++|.... ... + ...+++++.+|+.+.. +.++|+|+|+|+.
T Consensus 118 ~~~mkILVTGatGFIGs~Lv~~Ll~~G~~V~~ldr~~~~~~~~~~~~~~~~~~~~~~~Di~~~~---~~~~D~ViHlAa~ 194 (436)
T PLN02166 118 RKRLRIVVTGGAGFVGSHLVDKLIGRGDEVIVIDNFFTGRKENLVHLFGNPRFELIRHDVVEPI---LLEVDQIYHLACP 194 (436)
T ss_pred cCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCccHhHhhhhccCCceEEEECcccccc---ccCCCEEEECcee
Confidence 3458999999 9999999999999999999999985321 111 1 1235778888887643 4679999999987
Q ss_pred cCCCCCCCCh------hhhHHHHHHHHhhcCCccEEEEEccceeecCCCCccccCCC-----CCCCCChhHHHHHHHHHH
Q 017914 131 IPPLEGTGDP------MLKHGELLRSTLMNGHLQWLGYLSSTGVYGHSGGAWVDEDY-----PANPTTELGRLRLSAEKG 199 (364)
Q Consensus 131 ~~~~~~~~~~------~~~~~~~l~~a~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~-----~~~~~~~Y~~sK~~~E~~ 199 (364)
........++ +...+.|++++|+..++ +|||+||..|||.....+.+|+. |..|.+.|+.+|..+|++
T Consensus 195 ~~~~~~~~~p~~~~~~Nv~gT~nLleaa~~~g~-r~V~~SS~~VYg~~~~~p~~E~~~~~~~p~~p~s~Yg~SK~~aE~~ 273 (436)
T PLN02166 195 ASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA-RFLLTSTSEVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETL 273 (436)
T ss_pred ccchhhccCHHHHHHHHHHHHHHHHHHHHHhCC-EEEEECcHHHhCCCCCCCCCccccccCCCCCCCCchHHHHHHHHHH
Confidence 5543222222 23445788888888775 89999999999977666777763 666788999999999999
Q ss_pred HHHhhhhcCCcEEEEEecceecCCCC-----hHHHHHHhcCcc-cccccccCCcccccccHHHHHHHHHHHccCCCCCce
Q 017914 200 WLNLGRDLGISAQVFRLGGIYGPGRS-----SVDTIIKQLPLS-EGQKMRRARQYTSRIHVDDICQVLSASIDKPSAWNV 273 (364)
Q Consensus 200 ~~~~~~~~~~~~~ilRp~~v~g~~~~-----~~~~~~~~~~~~-~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~~g~~ 273 (364)
++.+.+..+++++++||+++||++.. .+..++....-. .....+++++.++|+|++|+|++++.+++... +++
T Consensus 274 ~~~y~~~~~l~~~ilR~~~vYGp~~~~~~~~~i~~~i~~~l~~~~i~v~g~g~~~rdfi~V~Dva~ai~~~~~~~~-~gi 352 (436)
T PLN02166 274 AMDYHRGAGVEVRIARIFNTYGPRMCLDDGRVVSNFVAQTIRKQPMTVYGDGKQTRSFQYVSDLVDGLVALMEGEH-VGP 352 (436)
T ss_pred HHHHHHHhCCCeEEEEEccccCCCCCCCccchHHHHHHHHhcCCCcEEeCCCCeEEeeEEHHHHHHHHHHHHhcCC-Cce
Confidence 99998888999999999999998732 233333321111 12234678889999999999999999998654 459
Q ss_pred EEEeCCCCCCHHHHHHHHHHHhcCCCCCcccCCCCCCCCCCCccCCCCCCCeEEEchhHHHhcCcccCCCCHHHHHHHHH
Q 017914 274 YNVVDDDPAPREEVFAYAWDLVEKKWPGLLKHRKPRENTESSNEKGSSRGEKRVSNVRMKKELGVRLWHPSYKSGLQSII 353 (364)
Q Consensus 274 ~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~e~l~~~~ 353 (364)
||+++++.+|++|+++.+.+.+|.+.. +.... . .........+|++|+++.|||+|++ +++|+|++++
T Consensus 353 yNIgs~~~~Si~ela~~I~~~~g~~~~--i~~~p------~---~~~~~~~~~~d~~Ka~~~LGw~P~~-sl~egl~~~i 420 (436)
T PLN02166 353 FNLGNPGEFTMLELAEVVKETIDSSAT--IEFKP------N---TADDPHKRKPDISKAKELLNWEPKI-SLREGLPLMV 420 (436)
T ss_pred EEeCCCCcEeHHHHHHHHHHHhCCCCC--eeeCC------C---CCCCccccccCHHHHHHHcCCCCCC-CHHHHHHHHH
Confidence 999999999999999999999987632 21200 0 1122334578999999999999999 8999999999
Q ss_pred HHhcccC
Q 017914 354 NQMDQPY 360 (364)
Q Consensus 354 ~~~~~~~ 360 (364)
+|++++.
T Consensus 421 ~~~~~~~ 427 (436)
T PLN02166 421 SDFRNRI 427 (436)
T ss_pred HHHHHHh
Confidence 9998765
|
|
| >PLN02695 GDP-D-mannose-3',5'-epimerase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-40 Score=301.49 Aligned_cols=290 Identities=17% Similarity=0.154 Sum_probs=219.4
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCChhhH--HhhccCceeeEEEEecCC
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETAL--MILTTLKNYTHLLVSIPP 133 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~--~~~~~~d~v~~~~~~~~~ 133 (364)
..+|+||||| |||||++|+++|.++||+|++++|.............+++.+|++|.+. ..+.++|.|+|+++....
T Consensus 19 ~~~~~IlVtGgtGfIG~~l~~~L~~~G~~V~~v~r~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~Vih~Aa~~~~ 98 (370)
T PLN02695 19 SEKLRICITGAGGFIASHIARRLKAEGHYIIASDWKKNEHMSEDMFCHEFHLVDLRVMENCLKVTKGVDHVFNLAADMGG 98 (370)
T ss_pred CCCCEEEEECCccHHHHHHHHHHHhCCCEEEEEEeccccccccccccceEEECCCCCHHHHHHHHhCCCEEEEcccccCC
Confidence 3568999999 9999999999999999999999986432111111235788899998663 556789999999986542
Q ss_pred CCCC-------CChhhhHHHHHHHHhhcCCccEEEEEccceeecCCCC----ccccCCC--CCCCCChhHHHHHHHHHHH
Q 017914 134 LEGT-------GDPMLKHGELLRSTLMNGHLQWLGYLSSTGVYGHSGG----AWVDEDY--PANPTTELGRLRLSAEKGW 200 (364)
Q Consensus 134 ~~~~-------~~~~~~~~~~l~~a~~~~~~~r~v~~Ss~~vy~~~~~----~~~~E~~--~~~~~~~Y~~sK~~~E~~~ 200 (364)
.... .........|++++++..++++|||+||..+|+.... .++.|+. +..|.+.|+.+|..+|+++
T Consensus 99 ~~~~~~~~~~~~~~N~~~t~nll~aa~~~~vk~~V~~SS~~vYg~~~~~~~~~~~~E~~~~p~~p~s~Yg~sK~~~E~~~ 178 (370)
T PLN02695 99 MGFIQSNHSVIMYNNTMISFNMLEAARINGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLATEELC 178 (370)
T ss_pred ccccccCchhhHHHHHHHHHHHHHHHHHhCCCEEEEeCchhhcCCccccCcCCCcCcccCCCCCCCCHHHHHHHHHHHHH
Confidence 2110 1122345678999999889999999999999986532 2356654 6788899999999999999
Q ss_pred HHhhhhcCCcEEEEEecceecCCCCh-------HHHHHHh-cCc-ccccccccCCcccccccHHHHHHHHHHHccCCCCC
Q 017914 201 LNLGRDLGISAQVFRLGGIYGPGRSS-------VDTIIKQ-LPL-SEGQKMRRARQYTSRIHVDDICQVLSASIDKPSAW 271 (364)
Q Consensus 201 ~~~~~~~~~~~~ilRp~~v~g~~~~~-------~~~~~~~-~~~-~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~~g 271 (364)
+.+++.++++++++||+++||++..+ ...++.. ... ......+++++.++|+|++|++++++.++++. .+
T Consensus 179 ~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~g~~~r~~i~v~D~a~ai~~~~~~~-~~ 257 (370)
T PLN02695 179 KHYTKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKALTSTDEFEMWGDGKQTRSFTFIDECVEGVLRLTKSD-FR 257 (370)
T ss_pred HHHHHHhCCCEEEEEECCccCCCCCccccccccHHHHHHHHHcCCCCeEEeCCCCeEEeEEeHHHHHHHHHHHHhcc-CC
Confidence 99888889999999999999997421 2233322 111 11123467889999999999999999988765 45
Q ss_pred ceEEEeCCCCCCHHHHHHHHHHHhcCCCCCcccCCCCCCCCCCCccCCCCCCCeEEEchhHHHhcCcccCCCCHHHHHHH
Q 017914 272 NVYNVVDDDPAPREEVFAYAWDLVEKKWPGLLKHRKPRENTESSNEKGSSRGEKRVSNVRMKKELGVRLWHPSYKSGLQS 351 (364)
Q Consensus 272 ~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~e~l~~ 351 (364)
++||+++++.+|++|+++.+.+..|.+.+... .+. + .......+|++|+++.|||+|++ +++|+|++
T Consensus 258 ~~~nv~~~~~~s~~el~~~i~~~~g~~~~i~~-~~~-------~----~~~~~~~~d~sk~~~~lgw~p~~-~l~e~i~~ 324 (370)
T PLN02695 258 EPVNIGSDEMVSMNEMAEIALSFENKKLPIKH-IPG-------P----EGVRGRNSDNTLIKEKLGWAPTM-RLKDGLRI 324 (370)
T ss_pred CceEecCCCceeHHHHHHHHHHHhCCCCCcee-cCC-------C----CCccccccCHHHHHHhcCCCCCC-CHHHHHHH
Confidence 79999999999999999999999987643211 100 0 01112457999999999999998 89999999
Q ss_pred HHHHhcccC
Q 017914 352 IINQMDQPY 360 (364)
Q Consensus 352 ~~~~~~~~~ 360 (364)
+++|++++.
T Consensus 325 ~~~~~~~~~ 333 (370)
T PLN02695 325 TYFWIKEQI 333 (370)
T ss_pred HHHHHHHHH
Confidence 999998754
|
|
| >PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-39 Score=319.65 Aligned_cols=303 Identities=16% Similarity=0.151 Sum_probs=224.7
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhC-CCEEEEEEeCchhhhhh-hhCCceEEEccCChhh-H--HhhccCceeeEEEEe
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQ-GWVVSGTCTNVMKKKEL-EQSGFDVHLFNANETA-L--MILTTLKNYTHLLVS 130 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~l-~~~~~~~~~~D~~~~~-~--~~~~~~d~v~~~~~~ 130 (364)
-.+|+||||| |||||++|+++|+++ ||+|++++|.......+ ...+++++.+|++|.. + .+++++|+|+|+|+.
T Consensus 313 ~~~~~VLVTGatGFIGs~Lv~~Ll~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~gDl~d~~~~l~~~l~~~D~ViHlAa~ 392 (660)
T PRK08125 313 KRRTRVLILGVNGFIGNHLTERLLRDDNYEVYGLDIGSDAISRFLGHPRFHFVEGDISIHSEWIEYHIKKCDVVLPLVAI 392 (660)
T ss_pred hcCCEEEEECCCchHHHHHHHHHHhCCCcEEEEEeCCchhhhhhcCCCceEEEeccccCcHHHHHHHhcCCCEEEECccc
Confidence 3568999999 999999999999986 79999999976543322 2246889999999854 2 467899999999987
Q ss_pred cCCCCCCCCh------hhhHHHHHHHHhhcCCccEEEEEccceeecCCCCccccCCCCC-------CCCChhHHHHHHHH
Q 017914 131 IPPLEGTGDP------MLKHGELLRSTLMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPA-------NPTTELGRLRLSAE 197 (364)
Q Consensus 131 ~~~~~~~~~~------~~~~~~~l~~a~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~-------~~~~~Y~~sK~~~E 197 (364)
..+.....++ ....+.++++++++.+ ++|||+||..+||.....+++|+.+. .|.+.|+.+|..+|
T Consensus 393 ~~~~~~~~~~~~~~~~Nv~~t~~ll~a~~~~~-~~~V~~SS~~vyg~~~~~~~~E~~~~~~~~p~~~p~s~Yg~sK~~~E 471 (660)
T PRK08125 393 ATPIEYTRNPLRVFELDFEENLKIIRYCVKYN-KRIIFPSTSEVYGMCTDKYFDEDTSNLIVGPINKQRWIYSVSKQLLD 471 (660)
T ss_pred cCchhhccCHHHHHHhhHHHHHHHHHHHHhcC-CeEEEEcchhhcCCCCCCCcCccccccccCCCCCCccchHHHHHHHH
Confidence 6543322222 2344568888888887 89999999999997655678887643 24568999999999
Q ss_pred HHHHHhhhhcCCcEEEEEecceecCCCC-----------hHHHHHHhcCccc-ccccccCCcccccccHHHHHHHHHHHc
Q 017914 198 KGWLNLGRDLGISAQVFRLGGIYGPGRS-----------SVDTIIKQLPLSE-GQKMRRARQYTSRIHVDDICQVLSASI 265 (364)
Q Consensus 198 ~~~~~~~~~~~~~~~ilRp~~v~g~~~~-----------~~~~~~~~~~~~~-~~~~~~~~~~~~~i~v~Dva~~~~~~l 265 (364)
++++.+++.++++++++||+++||+++. .+..++....... ....+.+++.++|||++|+|++++.++
T Consensus 472 ~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~i~~~i~~~~~~~~i~~~g~g~~~rd~i~v~Dva~a~~~~l 551 (660)
T PRK08125 472 RVIWAYGEKEGLRFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLVDGGKQKRCFTDIRDGIEALFRII 551 (660)
T ss_pred HHHHHHHHhcCCceEEEEEceeeCCCccccccccccccchHHHHHHHhcCCCCeEEeCCCceeeceeeHHHHHHHHHHHH
Confidence 9999998888999999999999999742 2333333311111 123367889999999999999999999
Q ss_pred cCCC---CCceEEEeCCC-CCCHHHHHHHHHHHhcCCCCCcccCCCCC--CCCCC-Ccc--CCCCCCCeEEEchhHHHhc
Q 017914 266 DKPS---AWNVYNVVDDD-PAPREEVFAYAWDLVEKKWPGLLKHRKPR--ENTES-SNE--KGSSRGEKRVSNVRMKKEL 336 (364)
Q Consensus 266 ~~~~---~g~~~~i~~~~-~~s~~el~~~i~~~~g~~~~~~~~~~~~~--~~~~~-~~~--~~~~~~~~~~d~~k~~~~l 336 (364)
+++. .|++||+++++ .+|++|+++.+.+.+|.+ +.....+... ..... ... .........+|++|++++|
T Consensus 552 ~~~~~~~~g~iyni~~~~~~~s~~el~~~i~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ka~~~L 630 (660)
T PRK08125 552 ENKDNRCDGQIINIGNPDNEASIRELAEMLLASFEKH-PLRDHFPPFAGFRVVESSSYYGKGYQDVEHRKPSIRNARRLL 630 (660)
T ss_pred hccccccCCeEEEcCCCCCceeHHHHHHHHHHHhccC-cccccCCccccccccccccccccccccccccCCChHHHHHHh
Confidence 8752 37899999985 799999999999999864 2111111100 00000 000 0012233457999999999
Q ss_pred CcccCCCCHHHHHHHHHHHhcccCCC
Q 017914 337 GVRLWHPSYKSGLQSIINQMDQPYQC 362 (364)
Q Consensus 337 G~~p~~~~~~e~l~~~~~~~~~~~~~ 362 (364)
||+|++ +++|+|+++++|+++++|-
T Consensus 631 Gw~P~~-~lee~l~~~i~~~~~~~~~ 655 (660)
T PRK08125 631 DWEPKI-DMQETIDETLDFFLRTVDL 655 (660)
T ss_pred CCCCCC-cHHHHHHHHHHHHHhcccc
Confidence 999999 8999999999999998763
|
|
| >PLN02206 UDP-glucuronate decarboxylase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-39 Score=301.22 Aligned_cols=285 Identities=16% Similarity=0.180 Sum_probs=216.0
Q ss_pred CCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchh-hh----hhhhCCceEEEccCChhhHHhhccCceeeEEEEec
Q 017914 58 SPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMK-KK----ELEQSGFDVHLFNANETALMILTTLKNYTHLLVSI 131 (364)
Q Consensus 58 ~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~-~~----~l~~~~~~~~~~D~~~~~~~~~~~~d~v~~~~~~~ 131 (364)
..|+||||| |||||++|+++|+++|++|++++|.... .. .+...+++++.+|+.++. +.++|.|+|+|+..
T Consensus 118 ~~~kILVTGatGfIGs~Lv~~Ll~~G~~V~~ld~~~~~~~~~~~~~~~~~~~~~i~~D~~~~~---l~~~D~ViHlAa~~ 194 (442)
T PLN02206 118 KGLRVVVTGGAGFVGSHLVDRLMARGDSVIVVDNFFTGRKENVMHHFSNPNFELIRHDVVEPI---LLEVDQIYHLACPA 194 (442)
T ss_pred CCCEEEEECcccHHHHHHHHHHHHCcCEEEEEeCCCccchhhhhhhccCCceEEEECCccChh---hcCCCEEEEeeeec
Confidence 458999999 9999999999999999999999874221 11 122346788889987743 46799999999865
Q ss_pred CCCCCCCCh------hhhHHHHHHHHhhcCCccEEEEEccceeecCCCCccccCCC-----CCCCCChhHHHHHHHHHHH
Q 017914 132 PPLEGTGDP------MLKHGELLRSTLMNGHLQWLGYLSSTGVYGHSGGAWVDEDY-----PANPTTELGRLRLSAEKGW 200 (364)
Q Consensus 132 ~~~~~~~~~------~~~~~~~l~~a~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~-----~~~~~~~Y~~sK~~~E~~~ 200 (364)
.+.....++ +.....|++++|++.++ +|||+||..+|+.....+.+|+. |..+.+.|+.+|..+|+++
T Consensus 195 ~~~~~~~~p~~~~~~Nv~gt~nLleaa~~~g~-r~V~~SS~~VYg~~~~~p~~E~~~~~~~P~~~~s~Y~~SK~~aE~~~ 273 (442)
T PLN02206 195 SPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVYGDPLQHPQVETYWGNVNPIGVRSCYDEGKRTAETLT 273 (442)
T ss_pred chhhhhcCHHHHHHHHHHHHHHHHHHHHHhCC-EEEEECChHHhCCCCCCCCCccccccCCCCCccchHHHHHHHHHHHH
Confidence 432222222 23445788899988886 89999999999876666677763 4455788999999999999
Q ss_pred HHhhhhcCCcEEEEEecceecCCC-----ChHHHHHHhcCc-ccccccccCCcccccccHHHHHHHHHHHccCCCCCceE
Q 017914 201 LNLGRDLGISAQVFRLGGIYGPGR-----SSVDTIIKQLPL-SEGQKMRRARQYTSRIHVDDICQVLSASIDKPSAWNVY 274 (364)
Q Consensus 201 ~~~~~~~~~~~~ilRp~~v~g~~~-----~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~~g~~~ 274 (364)
+.+.+..+++++++||+++||++. ..+..++..... ......+++++.++|+|++|+|++++.++++.. +++|
T Consensus 274 ~~y~~~~g~~~~ilR~~~vyGp~~~~~~~~~v~~~i~~~l~~~~i~i~g~G~~~rdfi~V~Dva~ai~~a~e~~~-~g~y 352 (442)
T PLN02206 274 MDYHRGANVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLMRLMEGEH-VGPF 352 (442)
T ss_pred HHHHHHhCCCeEEEEeccccCCCCCccccchHHHHHHHHHcCCCcEEeCCCCEEEeEEeHHHHHHHHHHHHhcCC-CceE
Confidence 998888899999999999999863 223333333111 111234678889999999999999999998654 4599
Q ss_pred EEeCCCCCCHHHHHHHHHHHhcCCCCCcccCCCCCCCCCCCccCCCCCCCeEEEchhHHHhcCcccCCCCHHHHHHHHHH
Q 017914 275 NVVDDDPAPREEVFAYAWDLVEKKWPGLLKHRKPRENTESSNEKGSSRGEKRVSNVRMKKELGVRLWHPSYKSGLQSIIN 354 (364)
Q Consensus 275 ~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~e~l~~~~~ 354 (364)
|+++++.+|++|+++.+.+.+|.+.. +... .. .........+|++|++++|||+|++ +++|+|+++++
T Consensus 353 NIgs~~~~sl~Elae~i~~~~g~~~~--i~~~-----p~----~~~~~~~~~~d~sKa~~~LGw~P~~-~l~egl~~~~~ 420 (442)
T PLN02206 353 NLGNPGEFTMLELAKVVQETIDPNAK--IEFR-----PN----TEDDPHKRKPDITKAKELLGWEPKV-SLRQGLPLMVK 420 (442)
T ss_pred EEcCCCceeHHHHHHHHHHHhCCCCc--eeeC-----CC----CCCCccccccCHHHHHHHcCCCCCC-CHHHHHHHHHH
Confidence 99999999999999999999986522 1110 00 1112234568999999999999999 89999999999
Q ss_pred Hhccc
Q 017914 355 QMDQP 359 (364)
Q Consensus 355 ~~~~~ 359 (364)
|+++.
T Consensus 421 ~~~~~ 425 (442)
T PLN02206 421 DFRQR 425 (442)
T ss_pred HHHHh
Confidence 99863
|
|
| >PRK10217 dTDP-glucose 4,6-dehydratase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-39 Score=295.68 Aligned_cols=299 Identities=15% Similarity=0.142 Sum_probs=217.8
Q ss_pred CCeEEEEc-CChhhHHHHHHHHhCCCEEEEE-EeCchh--hhhhh----hCCceEEEccCChhhH--Hhhc--cCceeeE
Q 017914 59 PNRMLILG-MGFVGRIFAEKIKNQGWVVSGT-CTNVMK--KKELE----QSGFDVHLFNANETAL--MILT--TLKNYTH 126 (364)
Q Consensus 59 ~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~-~r~~~~--~~~l~----~~~~~~~~~D~~~~~~--~~~~--~~d~v~~ 126 (364)
|++||||| |||||+++++.|+++|++|+++ +|.... ...+. ..++.++.+|++|.+. ..++ ++|.|+|
T Consensus 1 ~~~vlVtGatGfIG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~D~Vih 80 (355)
T PRK10217 1 MRKILITGGAGFIGSALVRYIINETSDAVVVVDKLTYAGNLMSLAPVAQSERFAFEKVDICDRAELARVFTEHQPDCVMH 80 (355)
T ss_pred CcEEEEEcCCcHHHHHHHHHHHHcCCCEEEEEecCccccchhhhhhcccCCceEEEECCCcChHHHHHHHhhcCCCEEEE
Confidence 47899999 9999999999999999876554 443211 11111 1346788999999764 4555 4899999
Q ss_pred EEEecCCCCCCCC------hhhhHHHHHHHHhhc---------CCccEEEEEccceeecCCC--CccccCCCCCCCCChh
Q 017914 127 LLVSIPPLEGTGD------PMLKHGELLRSTLMN---------GHLQWLGYLSSTGVYGHSG--GAWVDEDYPANPTTEL 189 (364)
Q Consensus 127 ~~~~~~~~~~~~~------~~~~~~~~l~~a~~~---------~~~~r~v~~Ss~~vy~~~~--~~~~~E~~~~~~~~~Y 189 (364)
+++.........+ .......++++++.. .++++||++||.++|+... ..+++|+.+..|.+.|
T Consensus 81 ~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~a~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~E~~~~~p~s~Y 160 (355)
T PRK10217 81 LAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFHHISTDEVYGDLHSTDDFFTETTPYAPSSPY 160 (355)
T ss_pred CCcccCcchhhhChHHHHHHhhHHHHHHHHHHHHhhhcccccccCceEEEEecchhhcCCCCCCCCCcCCCCCCCCCChh
Confidence 9987543322222 223445677777754 3578999999999998542 3468999888899999
Q ss_pred HHHHHHHHHHHHHhhhhcCCcEEEEEecceecCCCC---hHHHHHHhcCccc-ccccccCCcccccccHHHHHHHHHHHc
Q 017914 190 GRLRLSAEKGWLNLGRDLGISAQVFRLGGIYGPGRS---SVDTIIKQLPLSE-GQKMRRARQYTSRIHVDDICQVLSASI 265 (364)
Q Consensus 190 ~~sK~~~E~~~~~~~~~~~~~~~ilRp~~v~g~~~~---~~~~~~~~~~~~~-~~~~~~~~~~~~~i~v~Dva~~~~~~l 265 (364)
+.+|.++|.+++.++++.+++++++||+++||++.. .+..++....... ....+++++.++|+|++|+|++++.++
T Consensus 161 ~~sK~~~e~~~~~~~~~~~~~~~i~r~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~D~a~a~~~~~ 240 (355)
T PRK10217 161 SASKASSDHLVRAWLRTYGLPTLITNCSNNYGPYHFPEKLIPLMILNALAGKPLPVYGNGQQIRDWLYVEDHARALYCVA 240 (355)
T ss_pred HHHHHHHHHHHHHHHHHhCCCeEEEeeeeeeCCCCCcccHHHHHHHHHhcCCCceEeCCCCeeeCcCcHHHHHHHHHHHH
Confidence 999999999999998888999999999999999852 2333333211111 123467889999999999999999999
Q ss_pred cCCCCCceEEEeCCCCCCHHHHHHHHHHHhcCCCCCcccCCCCC---CCCCCCccCCCCCCCeEEEchhHHHhcCcccCC
Q 017914 266 DKPSAWNVYNVVDDDPAPREEVFAYAWDLVEKKWPGLLKHRKPR---ENTESSNEKGSSRGEKRVSNVRMKKELGVRLWH 342 (364)
Q Consensus 266 ~~~~~g~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~ 342 (364)
+....+++||+++++.+|++|+++.+.+.+|...+.. +..... .....+. .........+|++|++++|||+|++
T Consensus 241 ~~~~~~~~yni~~~~~~s~~~~~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~d~~k~~~~lg~~p~~ 318 (355)
T PRK10217 241 TTGKVGETYNIGGHNERKNLDVVETICELLEELAPNK-PQGVAHYRDLITFVAD-RPGHDLRYAIDASKIARELGWLPQE 318 (355)
T ss_pred hcCCCCCeEEeCCCCcccHHHHHHHHHHHhccccccc-ccccccccccceecCC-CCCCCcccccCHHHHHHhcCCCCcC
Confidence 8876678999999999999999999999998642211 100000 0000000 1112234578999999999999999
Q ss_pred CCHHHHHHHHHHHhcccC
Q 017914 343 PSYKSGLQSIINQMDQPY 360 (364)
Q Consensus 343 ~~~~e~l~~~~~~~~~~~ 360 (364)
+++|+|+++++|++++.
T Consensus 319 -~l~e~l~~~~~~~~~~~ 335 (355)
T PRK10217 319 -TFESGMRKTVQWYLANE 335 (355)
T ss_pred -cHHHHHHHHHHHHHhCH
Confidence 89999999999998764
|
|
| >TIGR01472 gmd GDP-mannose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-39 Score=294.84 Aligned_cols=297 Identities=14% Similarity=0.094 Sum_probs=218.8
Q ss_pred CeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchh-----hhhhh-------hCCceEEEccCChhhH--Hhhc--cCc
Q 017914 60 NRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMK-----KKELE-------QSGFDVHLFNANETAL--MILT--TLK 122 (364)
Q Consensus 60 ~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~-----~~~l~-------~~~~~~~~~D~~~~~~--~~~~--~~d 122 (364)
|+||||| +||||++|+++|+++|++|++++|+... ...+. ..+++++.+|++|.+. ..++ ++|
T Consensus 1 ~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~d 80 (343)
T TIGR01472 1 KIALITGITGQDGSYLAEFLLEKGYEVHGLIRRSSSFNTQRIEHIYEDPHNVNKARMKLHYGDLTDSSNLRRIIDEIKPT 80 (343)
T ss_pred CeEEEEcCCCcHHHHHHHHHHHCCCEEEEEecCCcccchhhhhhhhhccccccccceeEEEeccCCHHHHHHHHHhCCCC
Confidence 5899999 9999999999999999999999997542 11111 1357899999999764 5555 469
Q ss_pred eeeEEEEecCCCCCCCChh------hhHHHHHHHHhhcCCcc---EEEEEccceeecCCCCccccCCCCCCCCChhHHHH
Q 017914 123 NYTHLLVSIPPLEGTGDPM------LKHGELLRSTLMNGHLQ---WLGYLSSTGVYGHSGGAWVDEDYPANPTTELGRLR 193 (364)
Q Consensus 123 ~v~~~~~~~~~~~~~~~~~------~~~~~~l~~a~~~~~~~---r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~~sK 193 (364)
.|+|+|+..........+. ...+.++++++...+++ +|||+||..+||.....+++|+.+..|.++|+.+|
T Consensus 81 ~ViH~Aa~~~~~~~~~~~~~~~~~n~~gt~~ll~a~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK 160 (343)
T TIGR01472 81 EIYNLAAQSHVKVSFEIPEYTADVDGIGTLRLLEAVRTLGLIKSVKFYQASTSELYGKVQEIPQNETTPFYPRSPYAAAK 160 (343)
T ss_pred EEEECCcccccchhhhChHHHHHHHHHHHHHHHHHHHHhCCCcCeeEEEeccHHhhCCCCCCCCCCCCCCCCCChhHHHH
Confidence 9999998755433322222 22456888888876653 89999999999976666789999999999999999
Q ss_pred HHHHHHHHHhhhhcCCcEEEEEecceecCCCC--hH----HHHHHhcCcc--cccccccCCcccccccHHHHHHHHHHHc
Q 017914 194 LSAEKGWLNLGRDLGISAQVFRLGGIYGPGRS--SV----DTIIKQLPLS--EGQKMRRARQYTSRIHVDDICQVLSASI 265 (364)
Q Consensus 194 ~~~E~~~~~~~~~~~~~~~ilRp~~v~g~~~~--~~----~~~~~~~~~~--~~~~~~~~~~~~~~i~v~Dva~~~~~~l 265 (364)
.++|.+++.++++.++++++.|+.++||++.. ++ ..++...... .....+++++.++|+|++|+|++++.++
T Consensus 161 ~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~rd~i~V~D~a~a~~~~~ 240 (343)
T TIGR01472 161 LYAHWITVNYREAYGLFAVNGILFNHESPRRGENFVTRKITRAAAKIKLGLQEKLYLGNLDAKRDWGHAKDYVEAMWLML 240 (343)
T ss_pred HHHHHHHHHHHHHhCCceEEEeecccCCCCCCccccchHHHHHHHHHHcCCCCceeeCCCccccCceeHHHHHHHHHHHH
Confidence 99999999998888999999999999998632 21 1112111111 1123467889999999999999999999
Q ss_pred cCCCCCceEEEeCCCCCCHHHHHHHHHHHhcCCCCCcc------cCCCCCC--CC--CCCccCCCCCCCeEEEchhHHHh
Q 017914 266 DKPSAWNVYNVVDDDPAPREEVFAYAWDLVEKKWPGLL------KHRKPRE--NT--ESSNEKGSSRGEKRVSNVRMKKE 335 (364)
Q Consensus 266 ~~~~~g~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~------~~~~~~~--~~--~~~~~~~~~~~~~~~d~~k~~~~ 335 (364)
+++. +++||+++++++|++|+++.+.+.+|.+.+... ..+.... .. ...............|++|++++
T Consensus 241 ~~~~-~~~yni~~g~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~ 319 (343)
T TIGR01472 241 QQDK-PDDYVIATGETHSVREFVEVSFEYIGKTLNWKDKGINEVGRCKETGKVHVEIDPRYFRPTEVDLLLGDATKAKEK 319 (343)
T ss_pred hcCC-CccEEecCCCceeHHHHHHHHHHHcCCCcccccccccccccccccCceeEEeCccccCCCccchhcCCHHHHHHh
Confidence 8764 358999999999999999999999997532100 0000000 00 00000111223345699999999
Q ss_pred cCcccCCCCHHHHHHHHHHHhcc
Q 017914 336 LGVRLWHPSYKSGLQSIINQMDQ 358 (364)
Q Consensus 336 lG~~p~~~~~~e~l~~~~~~~~~ 358 (364)
|||+|++ +++|+|++++++|++
T Consensus 320 lgw~p~~-~l~egi~~~~~~~~~ 341 (343)
T TIGR01472 320 LGWKPEV-SFEKLVKEMVEEDLE 341 (343)
T ss_pred hCCCCCC-CHHHHHHHHHHHHHh
Confidence 9999999 899999999999874
|
Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116). |
| >PLN02572 UDP-sulfoquinovose synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-38 Score=296.89 Aligned_cols=294 Identities=12% Similarity=0.127 Sum_probs=211.4
Q ss_pred CCCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhh-----------------hhh------hhCCceEEEccCC
Q 017914 56 WQSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKK-----------------KEL------EQSGFDVHLFNAN 111 (364)
Q Consensus 56 ~~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~-----------------~~l------~~~~~~~~~~D~~ 111 (364)
..++|+||||| +||||++|+++|+++|++|++++|..... ..+ ...+++++.+|++
T Consensus 44 ~~~~k~VLVTGatGfIGs~Lv~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 123 (442)
T PLN02572 44 SSKKKKVMVIGGDGYCGWATALHLSKRGYEVAIVDNLCRRLFDHQLGLDSLTPIASIHERVRRWKEVSGKEIELYVGDIC 123 (442)
T ss_pred cccCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeccccccccccccccccccccchHHHHHHHHHhhCCcceEEECCCC
Confidence 45678999999 99999999999999999999987532110 011 0136889999999
Q ss_pred hhhH--Hhhc--cCceeeEEEEecCCCCCCCC---------hhhhHHHHHHHHhhcCCcc-EEEEEccceeecCCCCccc
Q 017914 112 ETAL--MILT--TLKNYTHLLVSIPPLEGTGD---------PMLKHGELLRSTLMNGHLQ-WLGYLSSTGVYGHSGGAWV 177 (364)
Q Consensus 112 ~~~~--~~~~--~~d~v~~~~~~~~~~~~~~~---------~~~~~~~~l~~a~~~~~~~-r~v~~Ss~~vy~~~~~~~~ 177 (364)
|.+. ..++ ++|.|+|+++.........+ .+...+.|++++++..+++ +|||+||..+||.... ++
T Consensus 124 d~~~v~~~l~~~~~D~ViHlAa~~~~~~~~~~~~~~~~~~~~Nv~gt~nlleaa~~~gv~~~~V~~SS~~vYG~~~~-~~ 202 (442)
T PLN02572 124 DFEFLSEAFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAIKEFAPDCHLVKLGTMGEYGTPNI-DI 202 (442)
T ss_pred CHHHHHHHHHhCCCCEEEECCCcccChhhhcChhhHHHHHHHHHHHHHHHHHHHHHhCCCccEEEEecceecCCCCC-CC
Confidence 9764 4555 58999999865433222211 2234456888888888885 8999999999986431 22
Q ss_pred cC-----------C---CCCCCCChhHHHHHHHHHHHHHhhhhcCCcEEEEEecceecCCCCh-----------------
Q 017914 178 DE-----------D---YPANPTTELGRLRLSAEKGWLNLGRDLGISAQVFRLGGIYGPGRSS----------------- 226 (364)
Q Consensus 178 ~E-----------~---~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilRp~~v~g~~~~~----------------- 226 (364)
+| + .+..|.++|+.+|.++|.+++.+++.+|++++++||+++||+++..
T Consensus 203 ~E~~i~~~~~~~e~~~~~~~~P~s~Yg~SK~a~E~l~~~~~~~~gl~~v~lR~~~vyGp~~~~~~~~~~li~~~~~~~~~ 282 (442)
T PLN02572 203 EEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVRTDETMMDEELINRLDYDGVF 282 (442)
T ss_pred cccccccccccccccccCCCCCCCcchhHHHHHHHHHHHHHHhcCCCEEEEecccccCCCCcccccccccccccCcccch
Confidence 22 2 2567788999999999999999998889999999999999997421
Q ss_pred ---HHHHHHhcCccc-ccccccCCcccccccHHHHHHHHHHHccCCC-CC--ceEEEeCCCCCCHHHHHHHHHHH---hc
Q 017914 227 ---VDTIIKQLPLSE-GQKMRRARQYTSRIHVDDICQVLSASIDKPS-AW--NVYNVVDDDPAPREEVFAYAWDL---VE 296 (364)
Q Consensus 227 ---~~~~~~~~~~~~-~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~-~g--~~~~i~~~~~~s~~el~~~i~~~---~g 296 (364)
+..++.....+. ....++|++.++|+|++|+|++++.++++.. .| ++||+++ +.+|++|+++.+.+. +|
T Consensus 283 ~~~i~~~~~~~~~g~~i~v~g~G~~~Rdfi~V~Dva~a~~~al~~~~~~g~~~i~Nigs-~~~si~el~~~i~~~~~~~g 361 (442)
T PLN02572 283 GTALNRFCVQAAVGHPLTVYGKGGQTRGFLDIRDTVRCIEIAIANPAKPGEFRVFNQFT-EQFSVNELAKLVTKAGEKLG 361 (442)
T ss_pred hhHHHHHHHHHhcCCCceecCCCCEEECeEEHHHHHHHHHHHHhChhhcCceeEEEeCC-CceeHHHHHHHHHHHHHhhC
Confidence 222222211111 1234678899999999999999999998753 34 5899976 679999999999999 77
Q ss_pred CCCCCcccCCCCCCCCCCCccCCCCCCCeEEEchhHHHhcCcccCCC--CHHHHHHHHHHHhcccCC
Q 017914 297 KKWPGLLKHRKPRENTESSNEKGSSRGEKRVSNVRMKKELGVRLWHP--SYKSGLQSIINQMDQPYQ 361 (364)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~--~~~e~l~~~~~~~~~~~~ 361 (364)
.+.+... . ..+ ..+........|.+|++ +|||+|++. ++.|++.+++.||+++.+
T Consensus 362 ~~~~~~~-~-------p~~-~~~~~~~~~~~d~~k~~-~LGw~p~~~~~~l~~~l~~~~~~~~~~~~ 418 (442)
T PLN02572 362 LDVEVIS-V-------PNP-RVEAEEHYYNAKHTKLC-ELGLEPHLLSDSLLDSLLNFAVKYKDRVD 418 (442)
T ss_pred CCCCeee-C-------CCC-cccccccccCccHHHHH-HcCCCCCCcHHHHHHHHHHHHHHHHhhcc
Confidence 6532111 1 000 01222234557999997 599999862 489999999999987654
|
|
| >PLN02214 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-38 Score=287.30 Aligned_cols=285 Identities=18% Similarity=0.235 Sum_probs=210.3
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhh-----hhhh--CCceEEEccCChhhH--HhhccCceeeE
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKK-----ELEQ--SGFDVHLFNANETAL--MILTTLKNYTH 126 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-----~l~~--~~~~~~~~D~~~~~~--~~~~~~d~v~~ 126 (364)
.++|+||||| +||||++|+++|+++|++|++++|+.+... .+.. .+++++.+|++|.+. .++.++|.|+|
T Consensus 8 ~~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih 87 (342)
T PLN02214 8 PAGKTVCVTGAGGYIASWIVKILLERGYTVKGTVRNPDDPKNTHLRELEGGKERLILCKADLQDYEALKAAIDGCDGVFH 87 (342)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCchhhhHHHHHHhhCCCCcEEEEecCcCChHHHHHHHhcCCEEEE
Confidence 3468999999 999999999999999999999999765321 1111 247788999999764 67788999999
Q ss_pred EEEecCCCC-CCCChhhhHHHHHHHHhhcCCccEEEEEccc-eeecCCCC---ccccCCC------CCCCCChhHHHHHH
Q 017914 127 LLVSIPPLE-GTGDPMLKHGELLRSTLMNGHLQWLGYLSST-GVYGHSGG---AWVDEDY------PANPTTELGRLRLS 195 (364)
Q Consensus 127 ~~~~~~~~~-~~~~~~~~~~~~l~~a~~~~~~~r~v~~Ss~-~vy~~~~~---~~~~E~~------~~~~~~~Y~~sK~~ 195 (364)
+++...... ...+.....+.++++++++.+++||||+||. .+|+.... .+++|++ +..|.+.|+.+|..
T Consensus 88 ~A~~~~~~~~~~~~~nv~gt~~ll~aa~~~~v~r~V~~SS~~avyg~~~~~~~~~~~E~~~~~~~~~~~p~~~Y~~sK~~ 167 (342)
T PLN02214 88 TASPVTDDPEQMVEPAVNGAKFVINAAAEAKVKRVVITSSIGAVYMDPNRDPEAVVDESCWSDLDFCKNTKNWYCYGKMV 167 (342)
T ss_pred ecCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeccceeeeccCCCCCCcccCcccCCChhhccccccHHHHHHHH
Confidence 997532110 0112334556788989988899999999996 68975332 3478874 33467899999999
Q ss_pred HHHHHHHhhhhcCCcEEEEEecceecCCCCh-----HHHHHHhcCcccccccccCCcccccccHHHHHHHHHHHccCCCC
Q 017914 196 AEKGWLNLGRDLGISAQVFRLGGIYGPGRSS-----VDTIIKQLPLSEGQKMRRARQYTSRIHVDDICQVLSASIDKPSA 270 (364)
Q Consensus 196 ~E~~~~~~~~~~~~~~~ilRp~~v~g~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~~ 270 (364)
+|++++.++++.+++++++||+++||++... +..+.... .+.....+++.++|||++|+|++++.+++++..
T Consensus 168 aE~~~~~~~~~~g~~~v~lRp~~vyGp~~~~~~~~~~~~~~~~~---~g~~~~~~~~~~~~i~V~Dva~a~~~al~~~~~ 244 (342)
T PLN02214 168 AEQAAWETAKEKGVDLVVLNPVLVLGPPLQPTINASLYHVLKYL---TGSAKTYANLTQAYVDVRDVALAHVLVYEAPSA 244 (342)
T ss_pred HHHHHHHHHHHcCCcEEEEeCCceECCCCCCCCCchHHHHHHHH---cCCcccCCCCCcCeeEHHHHHHHHHHHHhCccc
Confidence 9999999988889999999999999997532 11222111 111112245678999999999999999998766
Q ss_pred CceEEEeCCCCCCHHHHHHHHHHHhcC-CCCCcccCCCCCCCCCCCccCCCCCCCeEEEchhHHHhcCcccCCCCHHHHH
Q 017914 271 WNVYNVVDDDPAPREEVFAYAWDLVEK-KWPGLLKHRKPRENTESSNEKGSSRGEKRVSNVRMKKELGVRLWHPSYKSGL 349 (364)
Q Consensus 271 g~~~~i~~~~~~s~~el~~~i~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~e~l 349 (364)
++.||+++ ..++++|+++.+.+.++. +.|.. . . . ..........+|++|++ +|||+| + +++|+|
T Consensus 245 ~g~yn~~~-~~~~~~el~~~i~~~~~~~~~~~~--~------~--~-~~~~~~~~~~~d~~k~~-~LG~~p-~-~lee~i 309 (342)
T PLN02214 245 SGRYLLAE-SARHRGEVVEILAKLFPEYPLPTK--C------K--D-EKNPRAKPYKFTNQKIK-DLGLEF-T-STKQSL 309 (342)
T ss_pred CCcEEEec-CCCCHHHHHHHHHHHCCCCCCCCC--C------c--c-ccCCCCCccccCcHHHH-HcCCcc-c-CHHHHH
Confidence 67999987 578999999999999853 22211 1 0 0 01112233458999997 699999 4 799999
Q ss_pred HHHHHHhccc
Q 017914 350 QSIINQMDQP 359 (364)
Q Consensus 350 ~~~~~~~~~~ 359 (364)
+++++|++++
T Consensus 310 ~~~~~~~~~~ 319 (342)
T PLN02214 310 YDTVKSLQEK 319 (342)
T ss_pred HHHHHHHHHc
Confidence 9999999864
|
|
| >PLN02653 GDP-mannose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-38 Score=287.85 Aligned_cols=294 Identities=13% Similarity=0.109 Sum_probs=220.0
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchh-----hhhhh------hCCceEEEccCChhhH--Hhhc--c
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMK-----KKELE------QSGFDVHLFNANETAL--MILT--T 120 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~-----~~~l~------~~~~~~~~~D~~~~~~--~~~~--~ 120 (364)
..+|+||||| +||||++|+++|+++|++|++++|.... ...+. ..++.++.+|++|.+. ..+. .
T Consensus 4 ~~~~~vlVTGatGfiG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~ 83 (340)
T PLN02653 4 PPRKVALITGITGQDGSYLTEFLLSKGYEVHGIIRRSSNFNTQRLDHIYIDPHPNKARMKLHYGDLSDASSLRRWLDDIK 83 (340)
T ss_pred CCCCEEEEECCCCccHHHHHHHHHHCCCEEEEEecccccccccchhhhccccccccCceEEEEecCCCHHHHHHHHHHcC
Confidence 3468999999 9999999999999999999999986542 11111 1347889999999764 4454 4
Q ss_pred CceeeEEEEecCCCCCCCCh------hhhHHHHHHHHhhcCCcc-----EEEEEccceeecCCCCccccCCCCCCCCChh
Q 017914 121 LKNYTHLLVSIPPLEGTGDP------MLKHGELLRSTLMNGHLQ-----WLGYLSSTGVYGHSGGAWVDEDYPANPTTEL 189 (364)
Q Consensus 121 ~d~v~~~~~~~~~~~~~~~~------~~~~~~~l~~a~~~~~~~-----r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y 189 (364)
+|.|+|+|+.........++ ......++++++...+++ +|||+||.++||.... +++|+.+..|.+.|
T Consensus 84 ~d~Vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~v~~Ss~~vyg~~~~-~~~E~~~~~p~~~Y 162 (340)
T PLN02653 84 PDEVYNLAAQSHVAVSFEMPDYTADVVATGALRLLEAVRLHGQETGRQIKYYQAGSSEMYGSTPP-PQSETTPFHPRSPY 162 (340)
T ss_pred CCEEEECCcccchhhhhhChhHHHHHHHHHHHHHHHHHHHhccccccceeEEEeccHHHhCCCCC-CCCCCCCCCCCChh
Confidence 69999999865432222222 223456778888776664 8999999999997665 78999999999999
Q ss_pred HHHHHHHHHHHHHhhhhcCCcEEEEEecceecCCCC--hH----HHHHHhcCcc--cccccccCCcccccccHHHHHHHH
Q 017914 190 GRLRLSAEKGWLNLGRDLGISAQVFRLGGIYGPGRS--SV----DTIIKQLPLS--EGQKMRRARQYTSRIHVDDICQVL 261 (364)
Q Consensus 190 ~~sK~~~E~~~~~~~~~~~~~~~ilRp~~v~g~~~~--~~----~~~~~~~~~~--~~~~~~~~~~~~~~i~v~Dva~~~ 261 (364)
+.+|.++|.+++.+++.+++.++..|+.++||++.. ++ ..++...... .....+++++.++|+|++|+|+++
T Consensus 163 ~~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~rd~i~v~D~a~a~ 242 (340)
T PLN02653 163 AVAKVAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRAVGRIKVGLQKKLFLGNLDASRDWGFAGDYVEAM 242 (340)
T ss_pred HHHHHHHHHHHHHHHHHcCCeEEEeeeccccCCCCCcccchhHHHHHHHHHHcCCCCceEeCCCcceecceeHHHHHHHH
Confidence 999999999999998888999999999999998632 22 2222111111 112236788999999999999999
Q ss_pred HHHccCCCCCceEEEeCCCCCCHHHHHHHHHHHhcCCCCCcccCCCCCCCCCCCccCCCCCCCeEEEchhHHHhcCcccC
Q 017914 262 SASIDKPSAWNVYNVVDDDPAPREEVFAYAWDLVEKKWPGLLKHRKPRENTESSNEKGSSRGEKRVSNVRMKKELGVRLW 341 (364)
Q Consensus 262 ~~~l~~~~~g~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~ 341 (364)
+.++++.. ++.||+++++++|++|+++.+.+.+|.+....... . .............+|++|++++|||+|+
T Consensus 243 ~~~~~~~~-~~~yni~~g~~~s~~e~~~~i~~~~g~~~~~~~~~------~-~~~~~~~~~~~~~~d~~k~~~~lgw~p~ 314 (340)
T PLN02653 243 WLMLQQEK-PDDYVVATEESHTVEEFLEEAFGYVGLNWKDHVEI------D-PRYFRPAEVDNLKGDASKAREVLGWKPK 314 (340)
T ss_pred HHHHhcCC-CCcEEecCCCceeHHHHHHHHHHHcCCCCCcceee------C-cccCCccccccccCCHHHHHHHhCCCCC
Confidence 99998754 46899999999999999999999998642111111 0 0001112223456799999999999999
Q ss_pred CCCHHHHHHHHHHHhcccC
Q 017914 342 HPSYKSGLQSIINQMDQPY 360 (364)
Q Consensus 342 ~~~~~e~l~~~~~~~~~~~ 360 (364)
+ +++|+|+++++|+++..
T Consensus 315 ~-~l~~gi~~~~~~~~~~~ 332 (340)
T PLN02653 315 V-GFEQLVKMMVDEDLELA 332 (340)
T ss_pred C-CHHHHHHHHHHHHHHhc
Confidence 9 89999999999998654
|
|
| >TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.5e-38 Score=286.88 Aligned_cols=294 Identities=14% Similarity=0.094 Sum_probs=216.3
Q ss_pred CCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhh----h-hCCceEEEccCChhhH--Hhhc--cCceeeEE
Q 017914 58 SPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKEL----E-QSGFDVHLFNANETAL--MILT--TLKNYTHL 127 (364)
Q Consensus 58 ~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l----~-~~~~~~~~~D~~~~~~--~~~~--~~d~v~~~ 127 (364)
.+|+||||| +||||+++++.|+++|++|++++|+....... . ...+.++.+|++|.+. ..++ ++|.|+|+
T Consensus 3 ~~k~ilItGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~vih~ 82 (349)
T TIGR02622 3 QGKKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLDPPTSPNLFELLNLAKKIEDHFGDIRDAAKLRKAIAEFKPEIVFHL 82 (349)
T ss_pred CCCEEEEECCCChhHHHHHHHHHHCCCEEEEEeCCCccchhHHHHHhhcCCceEEEccCCCHHHHHHHHhhcCCCEEEEC
Confidence 358999999 99999999999999999999999976543221 1 1246788999999764 4444 46999999
Q ss_pred EEecCCCCCCCChhh------hHHHHHHHHhhcCC-ccEEEEEccceeecCCC-CccccCCCCCCCCChhHHHHHHHHHH
Q 017914 128 LVSIPPLEGTGDPML------KHGELLRSTLMNGH-LQWLGYLSSTGVYGHSG-GAWVDEDYPANPTTELGRLRLSAEKG 199 (364)
Q Consensus 128 ~~~~~~~~~~~~~~~------~~~~~l~~a~~~~~-~~r~v~~Ss~~vy~~~~-~~~~~E~~~~~~~~~Y~~sK~~~E~~ 199 (364)
++.........++.. ....+++++++..+ +++|||+||..+|+... ..+++|+.+..|.++|+.+|.++|.+
T Consensus 83 A~~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~iv~~SS~~vyg~~~~~~~~~e~~~~~p~~~Y~~sK~~~e~~ 162 (349)
T TIGR02622 83 AAQPLVRKSYADPLETFETNVMGTVNLLEAIRAIGSVKAVVNVTSDKCYRNDEWVWGYRETDPLGGHDPYSSSKACAELV 162 (349)
T ss_pred CcccccccchhCHHHHHHHhHHHHHHHHHHHHhcCCCCEEEEEechhhhCCCCCCCCCccCCCCCCCCcchhHHHHHHHH
Confidence 985433323333322 23456677776655 78999999999998643 24578888888999999999999999
Q ss_pred HHHhhhhc-------CCcEEEEEecceecCCC----ChHHHHHHhcCcccccccccCCcccccccHHHHHHHHHHHccCC
Q 017914 200 WLNLGRDL-------GISAQVFRLGGIYGPGR----SSVDTIIKQLPLSEGQKMRRARQYTSRIHVDDICQVLSASIDKP 268 (364)
Q Consensus 200 ~~~~~~~~-------~~~~~ilRp~~v~g~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~ 268 (364)
++.+++.. +++++++||+.+||+++ ..+..++....-.....++.+++.++|+|++|+|++++.++++.
T Consensus 163 ~~~~~~~~~~~~~~~~i~~~~lR~~~vyGp~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~rd~i~v~D~a~a~~~~~~~~ 242 (349)
T TIGR02622 163 IASYRSSFFGVANFHGIKIASARAGNVIGGGDWAEDRLIPDVIRAFSSNKIVIIRNPDATRPWQHVLEPLSGYLLLAEKL 242 (349)
T ss_pred HHHHHHHhhcccccCCCcEEEEccCcccCCCcchhhhhhHHHHHHHhcCCCeEECCCCcccceeeHHHHHHHHHHHHHHH
Confidence 99887543 89999999999999864 23344443322222234466889999999999999999887642
Q ss_pred -----CCCceEEEeCC--CCCCHHHHHHHHHHHhcCCCCCcccCCCCCCCCCCCccCCCCCCCeEEEchhHHHhcCcccC
Q 017914 269 -----SAWNVYNVVDD--DPAPREEVFAYAWDLVEKKWPGLLKHRKPRENTESSNEKGSSRGEKRVSNVRMKKELGVRLW 341 (364)
Q Consensus 269 -----~~g~~~~i~~~--~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~ 341 (364)
..+++||++++ ++++..|+++.+.+.++.. +..+... ..+ ..........+|++|++++|||+|+
T Consensus 243 ~~~~~~~~~~yni~s~~~~~~s~~~~~~~i~~~~~~~-~~~~~~~------~~~-~~~~~~~~~~~d~~k~~~~lgw~p~ 314 (349)
T TIGR02622 243 FTGQAEFAGAWNFGPRASDNARVVELVVDALEFWWGD-DAEWEDD------SDL-NHPHEARLLKLDSSKARTLLGWHPR 314 (349)
T ss_pred hhcCccccceeeeCCCcccCcCHHHHHHHHHHHhcCC-CCceeec------cCC-CCCcccceeecCHHHHHHHhCCCCC
Confidence 23579999975 6899999999999887532 1111110 000 0112233467899999999999999
Q ss_pred CCCHHHHHHHHHHHhcccC
Q 017914 342 HPSYKSGLQSIINQMDQPY 360 (364)
Q Consensus 342 ~~~~~e~l~~~~~~~~~~~ 360 (364)
+ +++++|+++++|++++.
T Consensus 315 ~-~l~~gi~~~i~w~~~~~ 332 (349)
T TIGR02622 315 W-GLEEAVSRTVDWYKAWL 332 (349)
T ss_pred C-CHHHHHHHHHHHHHHHh
Confidence 9 89999999999998764
|
Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose. |
| >PLN02240 UDP-glucose 4-epimerase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-37 Score=285.70 Aligned_cols=293 Identities=17% Similarity=0.144 Sum_probs=217.8
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhh----hhhh------hCCceEEEccCChhhH--Hhhc--cC
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKK----KELE------QSGFDVHLFNANETAL--MILT--TL 121 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~----~~l~------~~~~~~~~~D~~~~~~--~~~~--~~ 121 (364)
+++++||||| |||||++|+++|+++|++|++++|..... ..+. ..++.++.+|++|.+. ..++ .+
T Consensus 3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~~~ 82 (352)
T PLN02240 3 LMGRTILVTGGAGYIGSHTVLQLLLAGYKVVVIDNLDNSSEEALRRVKELAGDLGDNLVFHKVDLRDKEALEKVFASTRF 82 (352)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCcchHHHHHHHHHhhcccCccceEEecCcCCHHHHHHHHHhCCC
Confidence 4468999999 99999999999999999999998753221 1111 1357889999999764 3443 68
Q ss_pred ceeeEEEEecCCCCCCCChh------hhHHHHHHHHhhcCCccEEEEEccceeecCCCCccccCCCCCCCCChhHHHHHH
Q 017914 122 KNYTHLLVSIPPLEGTGDPM------LKHGELLRSTLMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANPTTELGRLRLS 195 (364)
Q Consensus 122 d~v~~~~~~~~~~~~~~~~~------~~~~~~l~~a~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~~sK~~ 195 (364)
|.|+|+++.........++. .....+++++++..++++|||+||.++|+.....+++|+.+..+.+.|+.+|.+
T Consensus 83 d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~E~~~~~~~~~Y~~sK~~ 162 (352)
T PLN02240 83 DAVIHFAGLKAVGESVAKPLLYYDNNLVGTINLLEVMAKHGCKKLVFSSSATVYGQPEEVPCTEEFPLSATNPYGRTKLF 162 (352)
T ss_pred CEEEEccccCCccccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEccHHHhCCCCCCCCCCCCCCCCCCHHHHHHHH
Confidence 99999997643322222222 234457788888888899999999999987767789999999999999999999
Q ss_pred HHHHHHHhhhh-cCCcEEEEEecceecCCCC------------hHHHHHHh----c--Ccccc---cccccCCccccccc
Q 017914 196 AEKGWLNLGRD-LGISAQVFRLGGIYGPGRS------------SVDTIIKQ----L--PLSEG---QKMRRARQYTSRIH 253 (364)
Q Consensus 196 ~E~~~~~~~~~-~~~~~~ilRp~~v~g~~~~------------~~~~~~~~----~--~~~~~---~~~~~~~~~~~~i~ 253 (364)
+|++++.++.. .+++++++|++++||++.. .+..++.. . .+... ...+.|.+.++|||
T Consensus 163 ~e~~~~~~~~~~~~~~~~~~R~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~i~ 242 (352)
T PLN02240 163 IEEICRDIHASDPEWKIILLRYFNPVGAHPSGRIGEDPKGIPNNLMPYVQQVAVGRRPELTVFGNDYPTKDGTGVRDYIH 242 (352)
T ss_pred HHHHHHHHHHhcCCCCEEEEeecCcCCCCccccccCCCCCCcchHHHHHHHHHhCCCCceEEeCCCCCCCCCCEEEeeEE
Confidence 99999988654 5789999999999986421 11111111 1 11110 11236788999999
Q ss_pred HHHHHHHHHHHccCC-----CCCceEEEeCCCCCCHHHHHHHHHHHhcCCCCCcccCCCCCCCCCCCccCCCCCCCeEEE
Q 017914 254 VDDICQVLSASIDKP-----SAWNVYNVVDDDPAPREEVFAYAWDLVEKKWPGLLKHRKPRENTESSNEKGSSRGEKRVS 328 (364)
Q Consensus 254 v~Dva~~~~~~l~~~-----~~g~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 328 (364)
++|+|++++.+++.. ..+++||+++++++|++|+++.+.+.+|.+.+..... . .........+|
T Consensus 243 v~D~a~a~~~a~~~~~~~~~~~~~~yni~~~~~~s~~el~~~i~~~~g~~~~~~~~~-------~----~~~~~~~~~~d 311 (352)
T PLN02240 243 VMDLADGHIAALRKLFTDPDIGCEAYNLGTGKGTSVLEMVAAFEKASGKKIPLKLAP-------R----RPGDAEEVYAS 311 (352)
T ss_pred HHHHHHHHHHHHhhhhhccCCCCceEEccCCCcEeHHHHHHHHHHHhCCCCCceeCC-------C----CCCChhhhhcC
Confidence 999999998888642 2358999999999999999999999999764321111 0 11122345679
Q ss_pred chhHHHhcCcccCCCCHHHHHHHHHHHhcccCC
Q 017914 329 NVRMKKELGVRLWHPSYKSGLQSIINQMDQPYQ 361 (364)
Q Consensus 329 ~~k~~~~lG~~p~~~~~~e~l~~~~~~~~~~~~ 361 (364)
++|++++|||+|++ +++|+|+++++|++++..
T Consensus 312 ~~k~~~~lg~~p~~-~l~~~l~~~~~~~~~~~~ 343 (352)
T PLN02240 312 TEKAEKELGWKAKY-GIDEMCRDQWNWASKNPY 343 (352)
T ss_pred HHHHHHHhCCCCCC-CHHHHHHHHHHHHHhCcc
Confidence 99999999999999 899999999999998753
|
|
| >PRK10084 dTDP-glucose 4,6 dehydratase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-37 Score=285.75 Aligned_cols=298 Identities=16% Similarity=0.158 Sum_probs=217.3
Q ss_pred CeEEEEc-CChhhHHHHHHHHhCCCE-EEEEEeCc--hhhhhhh----hCCceEEEccCChhhH--Hhhc--cCceeeEE
Q 017914 60 NRMLILG-MGFVGRIFAEKIKNQGWV-VSGTCTNV--MKKKELE----QSGFDVHLFNANETAL--MILT--TLKNYTHL 127 (364)
Q Consensus 60 ~~vlVtG-tG~iG~~l~~~L~~~g~~-V~~~~r~~--~~~~~l~----~~~~~~~~~D~~~~~~--~~~~--~~d~v~~~ 127 (364)
|+||||| +||||++|+++|+++|++ |+++++.. .....+. ...+.++.+|++|.+. ..++ ++|.|+|+
T Consensus 1 mkilITGgtG~iG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~ 80 (352)
T PRK10084 1 MKILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESLADVSDSERYVFEHADICDRAELDRIFAQHQPDAVMHL 80 (352)
T ss_pred CeEEEECCCcHHhHHHHHHHHHhCCCeEEEecCCCccchHHHHHhcccCCceEEEEecCCCHHHHHHHHHhcCCCEEEEC
Confidence 5899998 999999999999999975 55555532 1111111 1346788999999763 4454 48999999
Q ss_pred EEecCCCCC------CCChhhhHHHHHHHHhhcC---------CccEEEEEccceeecCCC----------CccccCCCC
Q 017914 128 LVSIPPLEG------TGDPMLKHGELLRSTLMNG---------HLQWLGYLSSTGVYGHSG----------GAWVDEDYP 182 (364)
Q Consensus 128 ~~~~~~~~~------~~~~~~~~~~~l~~a~~~~---------~~~r~v~~Ss~~vy~~~~----------~~~~~E~~~ 182 (364)
++....... ..+.+.....++++++... ++++|||+||..+|+... ..+++|+.+
T Consensus 81 A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~~~~~~~~E~~~ 160 (352)
T PRK10084 81 AAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSALDEDKKNAFRFHHISTDEVYGDLPHPDEVENSEELPLFTETTA 160 (352)
T ss_pred CcccCCcchhcCchhhhhhhhHHHHHHHHHHHHhccccccccccceeEEEecchhhcCCCCccccccccccCCCccccCC
Confidence 986533211 1223334567788888652 467999999999998531 124788888
Q ss_pred CCCCChhHHHHHHHHHHHHHhhhhcCCcEEEEEecceecCCCC---hHHHHHHhcCccc-ccccccCCcccccccHHHHH
Q 017914 183 ANPTTELGRLRLSAEKGWLNLGRDLGISAQVFRLGGIYGPGRS---SVDTIIKQLPLSE-GQKMRRARQYTSRIHVDDIC 258 (364)
Q Consensus 183 ~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilRp~~v~g~~~~---~~~~~~~~~~~~~-~~~~~~~~~~~~~i~v~Dva 258 (364)
..|.+.|+.+|.++|.+++.+++.++++++++|++.+||++.. .+..++....... ....+++++.++|+|++|+|
T Consensus 161 ~~p~~~Y~~sK~~~E~~~~~~~~~~g~~~vilr~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v~D~a 240 (352)
T PRK10084 161 YAPSSPYSASKASSDHLVRAWLRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYGKGDQIRDWLYVEDHA 240 (352)
T ss_pred CCCCChhHHHHHHHHHHHHHHHHHhCCCEEEEeccceeCCCcCccchHHHHHHHHhcCCCeEEeCCCCeEEeeEEHHHHH
Confidence 8999999999999999999998888999999999999998842 3333333211111 12346788999999999999
Q ss_pred HHHHHHccCCCCCceEEEeCCCCCCHHHHHHHHHHHhcCCCCCcccCCCCCCCCCCCccCCCCCCCeEEEchhHHHhcCc
Q 017914 259 QVLSASIDKPSAWNVYNVVDDDPAPREEVFAYAWDLVEKKWPGLLKHRKPRENTESSNEKGSSRGEKRVSNVRMKKELGV 338 (364)
Q Consensus 259 ~~~~~~l~~~~~g~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~ 338 (364)
++++.++++...+++||+++++.++++|+++.+++.+|...|....... .. ...+. .........+|++|++++|||
T Consensus 241 ~a~~~~l~~~~~~~~yni~~~~~~s~~~~~~~i~~~~~~~~p~~~~~~~-~~-~~~~~-~~~~~~~~~~d~~k~~~~lg~ 317 (352)
T PRK10084 241 RALYKVVTEGKAGETYNIGGHNEKKNLDVVLTICDLLDEIVPKATSYRE-QI-TYVAD-RPGHDRRYAIDASKISRELGW 317 (352)
T ss_pred HHHHHHHhcCCCCceEEeCCCCcCcHHHHHHHHHHHhccccccccchhh-hc-ccccc-CCCCCceeeeCHHHHHHHcCC
Confidence 9999999876668899999999999999999999999875332211100 00 00000 111223457899999999999
Q ss_pred ccCCCCHHHHHHHHHHHhcccCC
Q 017914 339 RLWHPSYKSGLQSIINQMDQPYQ 361 (364)
Q Consensus 339 ~p~~~~~~e~l~~~~~~~~~~~~ 361 (364)
+|++ +++|+|+++++|++++.+
T Consensus 318 ~p~~-~l~~~l~~~~~~~~~~~~ 339 (352)
T PRK10084 318 KPQE-TFESGIRKTVEWYLANTE 339 (352)
T ss_pred CCcC-CHHHHHHHHHHHHHhCHH
Confidence 9998 899999999999998643
|
|
| >PRK10675 UDP-galactose-4-epimerase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-37 Score=282.72 Aligned_cols=293 Identities=18% Similarity=0.148 Sum_probs=216.8
Q ss_pred CeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhh----hh---hhCCceEEEccCChhhH--Hhhc--cCceeeEE
Q 017914 60 NRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKK----EL---EQSGFDVHLFNANETAL--MILT--TLKNYTHL 127 (364)
Q Consensus 60 ~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~----~l---~~~~~~~~~~D~~~~~~--~~~~--~~d~v~~~ 127 (364)
|+||||| +||||++|+++|+++|++|++++|...... .+ ...++.++.+|++|.+. ..+. ++|+|+|+
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vvh~ 80 (338)
T PRK10675 1 MRVLVTGGSGYIGSHTCVQLLQNGHDVVILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALLTEILHDHAIDTVIHF 80 (338)
T ss_pred CeEEEECCCChHHHHHHHHHHHCCCeEEEEecCCCchHhHHHHHHHhcCCCceEEEccCCCHHHHHHHHhcCCCCEEEEC
Confidence 6899999 999999999999999999999986432211 11 12346788999999764 4443 58999999
Q ss_pred EEecCCCCCCCCh------hhhHHHHHHHHhhcCCccEEEEEccceeecCCCCccccCCCCC-CCCChhHHHHHHHHHHH
Q 017914 128 LVSIPPLEGTGDP------MLKHGELLRSTLMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPA-NPTTELGRLRLSAEKGW 200 (364)
Q Consensus 128 ~~~~~~~~~~~~~------~~~~~~~l~~a~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~-~~~~~Y~~sK~~~E~~~ 200 (364)
++........... ......+++++++..++++||++||.++|+.....+++|+.+. .|.+.|+.+|..+|+++
T Consensus 81 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~yg~~~~~~~~E~~~~~~p~~~Y~~sK~~~E~~~ 160 (338)
T PRK10675 81 AGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNLIFSSSATVYGDQPKIPYVESFPTGTPQSPYGKSKLMVEQIL 160 (338)
T ss_pred CccccccchhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeccHHhhCCCCCCccccccCCCCCCChhHHHHHHHHHHH
Confidence 8765432211121 1234567888888889999999999999987666678999887 68899999999999999
Q ss_pred HHhhhh-cCCcEEEEEecceecCCCC-------------hHHHHHHhc---C--ccc-c--cccccCCcccccccHHHHH
Q 017914 201 LNLGRD-LGISAQVFRLGGIYGPGRS-------------SVDTIIKQL---P--LSE-G--QKMRRARQYTSRIHVDDIC 258 (364)
Q Consensus 201 ~~~~~~-~~~~~~ilRp~~v~g~~~~-------------~~~~~~~~~---~--~~~-~--~~~~~~~~~~~~i~v~Dva 258 (364)
+++++. .+++++++|++.+||+... .+..+.... . +.. + ....++.+.++|+|++|+|
T Consensus 161 ~~~~~~~~~~~~~ilR~~~v~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v~D~a 240 (338)
T PRK10675 161 TDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDYIHVMDLA 240 (338)
T ss_pred HHHHHhcCCCcEEEEEeeeecCCCcccccccCCCCChhHHHHHHHHHHhcCCCceEEeCCcCCCCCCcEEEeeEEHHHHH
Confidence 998765 3799999999999986411 122222111 0 100 0 1113567889999999999
Q ss_pred HHHHHHccCC---CCCceEEEeCCCCCCHHHHHHHHHHHhcCCCCCcccCCCCCCCCCCCccCCCCCCCeEEEchhHHHh
Q 017914 259 QVLSASIDKP---SAWNVYNVVDDDPAPREEVFAYAWDLVEKKWPGLLKHRKPRENTESSNEKGSSRGEKRVSNVRMKKE 335 (364)
Q Consensus 259 ~~~~~~l~~~---~~g~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~ 335 (364)
++++.+++.. ..+++||+++++.+|++|+++.+.+.+|.+.+. ... .. .........+|++|+++.
T Consensus 241 ~~~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~--~~~-----~~----~~~~~~~~~~~~~k~~~~ 309 (338)
T PRK10675 241 DGHVAAMEKLANKPGVHIYNLGAGVGSSVLDVVNAFSKACGKPVNY--HFA-----PR----REGDLPAYWADASKADRE 309 (338)
T ss_pred HHHHHHHHhhhccCCCceEEecCCCceeHHHHHHHHHHHhCCCCCe--eeC-----CC----CCCchhhhhcCHHHHHHH
Confidence 9999998752 235799999999999999999999999976332 110 00 111223456899999999
Q ss_pred cCcccCCCCHHHHHHHHHHHhcccCCCCC
Q 017914 336 LGVRLWHPSYKSGLQSIINQMDQPYQCSP 364 (364)
Q Consensus 336 lG~~p~~~~~~e~l~~~~~~~~~~~~~~~ 364 (364)
+||+|++ +++++|+++++|++++..-+|
T Consensus 310 lg~~p~~-~~~~~~~~~~~~~~~~~~~~~ 337 (338)
T PRK10675 310 LNWRVTR-TLDEMAQDTWHWQSRHPQGYP 337 (338)
T ss_pred hCCCCcC-cHHHHHHHHHHHHHhhhhccC
Confidence 9999999 899999999999998765554
|
|
| >PLN02260 probable rhamnose biosynthetic enzyme | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-37 Score=306.59 Aligned_cols=294 Identities=16% Similarity=0.184 Sum_probs=223.5
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhC--CCEEEEEEeCc--hhhhhhh----hCCceEEEccCChhhH--Hhh--ccCce
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQ--GWVVSGTCTNV--MKKKELE----QSGFDVHLFNANETAL--MIL--TTLKN 123 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~--g~~V~~~~r~~--~~~~~l~----~~~~~~~~~D~~~~~~--~~~--~~~d~ 123 (364)
..+|+||||| |||||++|+++|+++ |++|++++|.. .+...+. ..+++++.+|++|.+. ..+ .++|+
T Consensus 4 ~~~~~VLVTGatGfIG~~lv~~Ll~~g~~~~V~~~d~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~D~ 83 (668)
T PLN02260 4 YEPKNILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDYCSNLKNLNPSKSSPNFKFVKGDIASADLVNYLLITEGIDT 83 (668)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHhCCCCEEEEEeCCCccchhhhhhhcccCCCeEEEECCCCChHHHHHHHhhcCCCE
Confidence 3468999999 999999999999998 68999998852 1111111 2468899999999764 233 67999
Q ss_pred eeEEEEecCCCCCCCCh------hhhHHHHHHHHhhcCC-ccEEEEEccceeecCCCCcc---ccCCCCCCCCChhHHHH
Q 017914 124 YTHLLVSIPPLEGTGDP------MLKHGELLRSTLMNGH-LQWLGYLSSTGVYGHSGGAW---VDEDYPANPTTELGRLR 193 (364)
Q Consensus 124 v~~~~~~~~~~~~~~~~------~~~~~~~l~~a~~~~~-~~r~v~~Ss~~vy~~~~~~~---~~E~~~~~~~~~Y~~sK 193 (364)
|+|+|+.........++ ....+.+++++++..+ ++||||+||..+||.....+ .+|+.+..|.+.|+.+|
T Consensus 84 ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~vkr~I~~SS~~vyg~~~~~~~~~~~E~~~~~p~~~Y~~sK 163 (668)
T PLN02260 84 IMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDADVGNHEASQLLPTNPYSATK 163 (668)
T ss_pred EEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEcchHHhCCCccccccCccccCCCCCCCCcHHHH
Confidence 99999876543333222 2234567888888766 89999999999999765432 36777888899999999
Q ss_pred HHHHHHHHHhhhhcCCcEEEEEecceecCCCC---hHHHHHHhcCcc-cccccccCCcccccccHHHHHHHHHHHccCCC
Q 017914 194 LSAEKGWLNLGRDLGISAQVFRLGGIYGPGRS---SVDTIIKQLPLS-EGQKMRRARQYTSRIHVDDICQVLSASIDKPS 269 (364)
Q Consensus 194 ~~~E~~~~~~~~~~~~~~~ilRp~~v~g~~~~---~~~~~~~~~~~~-~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~ 269 (364)
..+|++++++.+..+++++++||+++||+++. .+..+....... .....+++.+.++|||++|+|++++.++++..
T Consensus 164 ~~aE~~v~~~~~~~~l~~vilR~~~VyGp~~~~~~~i~~~~~~a~~g~~i~i~g~g~~~r~~ihV~Dva~a~~~~l~~~~ 243 (668)
T PLN02260 164 AGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMQGKPLPIHGDGSNVRSYLYCEDVAEAFEVVLHKGE 243 (668)
T ss_pred HHHHHHHHHHHHHcCCCEEEECcccccCcCCCcccHHHHHHHHHhCCCCeEEecCCCceEeeEEHHHHHHHHHHHHhcCC
Confidence 99999999998888999999999999999853 333333321111 11233678889999999999999999998776
Q ss_pred CCceEEEeCCCCCCHHHHHHHHHHHhcCCCCCcccCCCCCCCCCCCccCCCCCCCeEEEchhHHHhcCcccCCCCHHHHH
Q 017914 270 AWNVYNVVDDDPAPREEVFAYAWDLVEKKWPGLLKHRKPRENTESSNEKGSSRGEKRVSNVRMKKELGVRLWHPSYKSGL 349 (364)
Q Consensus 270 ~g~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~e~l 349 (364)
.+++||+++++.+++.|+++.+.+.+|.+....+... .. .........+|++|++ +|||+|++ +++|+|
T Consensus 244 ~~~vyni~~~~~~s~~el~~~i~~~~g~~~~~~i~~~-----~~----~p~~~~~~~~d~~k~~-~lGw~p~~-~~~egl 312 (668)
T PLN02260 244 VGHVYNIGTKKERRVIDVAKDICKLFGLDPEKSIKFV-----EN----RPFNDQRYFLDDQKLK-KLGWQERT-SWEEGL 312 (668)
T ss_pred CCCEEEECCCCeeEHHHHHHHHHHHhCCCCcceeeec-----CC----CCCCcceeecCHHHHH-HcCCCCCC-CHHHHH
Confidence 7889999999999999999999999997632111110 00 1112334668999996 79999998 899999
Q ss_pred HHHHHHhcccCC
Q 017914 350 QSIINQMDQPYQ 361 (364)
Q Consensus 350 ~~~~~~~~~~~~ 361 (364)
+++++|++++-+
T Consensus 313 ~~~i~w~~~~~~ 324 (668)
T PLN02260 313 KKTMEWYTSNPD 324 (668)
T ss_pred HHHHHHHHhChh
Confidence 999999997643
|
|
| >KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-37 Score=256.21 Aligned_cols=287 Identities=18% Similarity=0.190 Sum_probs=224.0
Q ss_pred CCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhh-----hhhCCceEEEccCChhhHHhhccCceeeEEEEec
Q 017914 58 SPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKE-----LEQSGFDVHLFNANETALMILTTLKNYTHLLVSI 131 (364)
Q Consensus 58 ~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-----l~~~~~~~~~~D~~~~~~~~~~~~d~v~~~~~~~ 131 (364)
..++|+||| +||||+||++.|..+||+|++++---..... .....++.+.-|+.. ..+..+|.|+|+|+.+
T Consensus 26 ~~lrI~itGgaGFIgSHLvdkLm~egh~VIa~Dn~ftg~k~n~~~~~~~~~fel~~hdv~~---pl~~evD~IyhLAapa 102 (350)
T KOG1429|consen 26 QNLRILITGGAGFIGSHLVDKLMTEGHEVIALDNYFTGRKENLEHWIGHPNFELIRHDVVE---PLLKEVDQIYHLAAPA 102 (350)
T ss_pred CCcEEEEecCcchHHHHHHHHHHhcCCeEEEEecccccchhhcchhccCcceeEEEeechh---HHHHHhhhhhhhccCC
Confidence 348999998 8999999999999999999999874322221 122566777777766 4778999999999988
Q ss_pred CCCCCCCChhh------hHHHHHHHHhhcCCccEEEEEccceeecCCCCccccCCC-----CCCCCChhHHHHHHHHHHH
Q 017914 132 PPLEGTGDPML------KHGELLRSTLMNGHLQWLGYLSSTGVYGHSGGAWVDEDY-----PANPTTELGRLRLSAEKGW 200 (364)
Q Consensus 132 ~~~~~~~~~~~------~~~~~l~~a~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~-----~~~~~~~Y~~sK~~~E~~~ 200 (364)
++......+.. ..+.|++..|++.+ +||++.||+.|||.+...|..|+. |..|.+-|...|..+|.++
T Consensus 103 sp~~y~~npvktIktN~igtln~lglakrv~-aR~l~aSTseVYgdp~~hpq~e~ywg~vnpigpr~cydegKr~aE~L~ 181 (350)
T KOG1429|consen 103 SPPHYKYNPVKTIKTNVIGTLNMLGLAKRVG-ARFLLASTSEVYGDPLVHPQVETYWGNVNPIGPRSCYDEGKRVAETLC 181 (350)
T ss_pred CCcccccCccceeeecchhhHHHHHHHHHhC-ceEEEeecccccCCcccCCCccccccccCcCCchhhhhHHHHHHHHHH
Confidence 87654333332 33456777777766 799999999999998777766653 5567888999999999999
Q ss_pred HHhhhhcCCcEEEEEecceecCCCC-----hHHHHHHh-cCcccccccccCCcccccccHHHHHHHHHHHccCCCCCceE
Q 017914 201 LNLGRDLGISAQVFRLGGIYGPGRS-----SVDTIIKQ-LPLSEGQKMRRARQYTSRIHVDDICQVLSASIDKPSAWNVY 274 (364)
Q Consensus 201 ~~~~~~~~~~~~ilRp~~v~g~~~~-----~~~~~~~~-~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~~g~~~ 274 (364)
.+|.++.|+.+.|.|+.+.|||.-. .+..+..+ ..-......++|.|.++|.+++|++++++.+++.+..+ -+
T Consensus 182 ~~y~k~~giE~rIaRifNtyGPrm~~~dgrvvsnf~~q~lr~epltv~g~G~qtRSF~yvsD~Vegll~Lm~s~~~~-pv 260 (350)
T KOG1429|consen 182 YAYHKQEGIEVRIARIFNTYGPRMHMDDGRVVSNFIAQALRGEPLTVYGDGKQTRSFQYVSDLVEGLLRLMESDYRG-PV 260 (350)
T ss_pred HHhhcccCcEEEEEeeecccCCccccCCChhhHHHHHHHhcCCCeEEEcCCcceEEEEeHHHHHHHHHHHhcCCCcC-Cc
Confidence 9999999999999999999999632 23333322 11112234578999999999999999999999998776 59
Q ss_pred EEeCCCCCCHHHHHHHHHHHhcCCCCCcccCCCCCCCCCCCccCCCCCCCeEEEchhHHHhcCcccCCCCHHHHHHHHHH
Q 017914 275 NVVDDDPAPREEVFAYAWDLVEKKWPGLLKHRKPRENTESSNEKGSSRGEKRVSNVRMKKELGVRLWHPSYKSGLQSIIN 354 (364)
Q Consensus 275 ~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~e~l~~~~~ 354 (364)
|+++|+.+|+.||++++.+..|-... +.+ ....+..+....-|++++++.|||.|+. +++|+|..++.
T Consensus 261 NiGnp~e~Tm~elAemv~~~~~~~s~--i~~---------~~~~~Ddp~kR~pDit~ake~LgW~Pkv-~L~egL~~t~~ 328 (350)
T KOG1429|consen 261 NIGNPGEFTMLELAEMVKELIGPVSE--IEF---------VENGPDDPRKRKPDITKAKEQLGWEPKV-SLREGLPLTVT 328 (350)
T ss_pred ccCCccceeHHHHHHHHHHHcCCCcc--eee---------cCCCCCCccccCccHHHHHHHhCCCCCC-cHHHhhHHHHH
Confidence 99999999999999999999964421 111 1123445556678999999999999999 89999999999
Q ss_pred HhcccCC
Q 017914 355 QMDQPYQ 361 (364)
Q Consensus 355 ~~~~~~~ 361 (364)
|+++.++
T Consensus 329 ~fr~~i~ 335 (350)
T KOG1429|consen 329 YFRERIA 335 (350)
T ss_pred HHHHHHH
Confidence 9997653
|
|
| >PLN00198 anthocyanidin reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-36 Score=277.06 Aligned_cols=285 Identities=14% Similarity=0.163 Sum_probs=203.8
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhh------hhh-CCceEEEccCChhhH--HhhccCceeeE
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKE------LEQ-SGFDVHLFNANETAL--MILTTLKNYTH 126 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~------l~~-~~~~~~~~D~~~~~~--~~~~~~d~v~~ 126 (364)
.++++||||| +||||++|+++|+++|++|++++|+...... +.. .+++++.+|++|.+. ..+.++|.|+|
T Consensus 7 ~~~~~vlItG~~GfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih 86 (338)
T PLN00198 7 TGKKTACVIGGTGFLASLLIKLLLQKGYAVNTTVRDPENQKKIAHLRALQELGDLKIFGADLTDEESFEAPIAGCDLVFH 86 (338)
T ss_pred CCCCeEEEECCchHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHhcCCCCceEEEEcCCCChHHHHHHHhcCCEEEE
Confidence 4468999999 9999999999999999999999987643221 111 257889999999764 66788999999
Q ss_pred EEEecCCCCCCCCh-------hhhHHHHHHHHhhcC-CccEEEEEccceeecCC----CCccccCCC---------CCCC
Q 017914 127 LLVSIPPLEGTGDP-------MLKHGELLRSTLMNG-HLQWLGYLSSTGVYGHS----GGAWVDEDY---------PANP 185 (364)
Q Consensus 127 ~~~~~~~~~~~~~~-------~~~~~~~l~~a~~~~-~~~r~v~~Ss~~vy~~~----~~~~~~E~~---------~~~~ 185 (364)
+|+..... ..++ ......++++++.+. ++++|||+||..+|+.. .+.+++|+. +..|
T Consensus 87 ~A~~~~~~--~~~~~~~~~~~nv~g~~~ll~a~~~~~~~~~~v~~SS~~~~g~~~~~~~~~~~~E~~~~~~~~~~~~~~p 164 (338)
T PLN00198 87 VATPVNFA--SEDPENDMIKPAIQGVHNVLKACAKAKSVKRVILTSSAAAVSINKLSGTGLVMNEKNWTDVEFLTSEKPP 164 (338)
T ss_pred eCCCCccC--CCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeecceeeeccCCCCCCceeccccCCchhhhhhcCCc
Confidence 99753221 1122 233455777777654 68999999999999853 233455542 2346
Q ss_pred CChhHHHHHHHHHHHHHhhhhcCCcEEEEEecceecCCCCh-----HH---HHHHhcCccccc--ccccCCcccccccHH
Q 017914 186 TTELGRLRLSAEKGWLNLGRDLGISAQVFRLGGIYGPGRSS-----VD---TIIKQLPLSEGQ--KMRRARQYTSRIHVD 255 (364)
Q Consensus 186 ~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilRp~~v~g~~~~~-----~~---~~~~~~~~~~~~--~~~~~~~~~~~i~v~ 255 (364)
.++|+.+|.++|.+++.+++.++++++++||+++||++... +. .+.....+.... ......+.++|+|++
T Consensus 165 ~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~R~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~V~ 244 (338)
T PLN00198 165 TWGYPASKTLAEKAAWKFAEENNIDLITVIPTLMAGPSLTSDIPSSLSLAMSLITGNEFLINGLKGMQMLSGSISITHVE 244 (338)
T ss_pred cchhHHHHHHHHHHHHHHHHhcCceEEEEeCCceECCCccCCCCCcHHHHHHHHcCCccccccccccccccCCcceeEHH
Confidence 78899999999999999998889999999999999997431 11 112221111110 000112247999999
Q ss_pred HHHHHHHHHccCCCCCceEEEeCCCCCCHHHHHHHHHHHhcC-CCCCcccCCCCCCCCCCCccCCCCCCCeEEEchhHHH
Q 017914 256 DICQVLSASIDKPSAWNVYNVVDDDPAPREEVFAYAWDLVEK-KWPGLLKHRKPRENTESSNEKGSSRGEKRVSNVRMKK 334 (364)
Q Consensus 256 Dva~~~~~~l~~~~~g~~~~i~~~~~~s~~el~~~i~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~ 334 (364)
|+|++++.+++....++.|+ +++..++++|+++.+.+.++. +.+. .. ...+ ......+|++|+++
T Consensus 245 D~a~a~~~~~~~~~~~~~~~-~~~~~~s~~el~~~i~~~~~~~~~~~--~~------~~~~-----~~~~~~~~~~k~~~ 310 (338)
T PLN00198 245 DVCRAHIFLAEKESASGRYI-CCAANTSVPELAKFLIKRYPQYQVPT--DF------GDFP-----SKAKLIISSEKLIS 310 (338)
T ss_pred HHHHHHHHHhhCcCcCCcEE-EecCCCCHHHHHHHHHHHCCCCCCCc--cc------cccC-----CCCccccChHHHHh
Confidence 99999999998875555784 556789999999999988753 2111 11 0000 11235679999986
Q ss_pred hcCcccCCCCHHHHHHHHHHHhccc
Q 017914 335 ELGVRLWHPSYKSGLQSIINQMDQP 359 (364)
Q Consensus 335 ~lG~~p~~~~~~e~l~~~~~~~~~~ 359 (364)
+||+|++ +++|+|+++++|++++
T Consensus 311 -~G~~p~~-~l~~gi~~~~~~~~~~ 333 (338)
T PLN00198 311 -EGFSFEY-GIEEIYDQTVEYFKAK 333 (338)
T ss_pred -CCceecC-cHHHHHHHHHHHHHHc
Confidence 6999999 7999999999999864
|
|
| >COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.8e-37 Score=275.58 Aligned_cols=290 Identities=21% Similarity=0.235 Sum_probs=228.4
Q ss_pred CeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCChhhH--HhhccC-ceeeEEEEecCCCC
Q 017914 60 NRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETAL--MILTTL-KNYTHLLVSIPPLE 135 (364)
Q Consensus 60 ~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~--~~~~~~-d~v~~~~~~~~~~~ 135 (364)
|+||||| |||||++|+++|+++||+|++++|......... .++.++.+|+++.+. .....+ |.|+|+++......
T Consensus 1 ~~ILVtG~tGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~~~~~d~vih~aa~~~~~~ 79 (314)
T COG0451 1 MRILVTGGAGFIGSHLVERLLAAGHDVRGLDRLRDGLDPLL-SGVEFVVLDLTDRDLVDELAKGVPDAVIHLAAQSSVPD 79 (314)
T ss_pred CeEEEEcCcccHHHHHHHHHHhCCCeEEEEeCCCccccccc-cccceeeecccchHHHHHHHhcCCCEEEEccccCchhh
Confidence 3599999 999999999999999999999999876655443 577899999999664 455666 99999999876544
Q ss_pred CC-------CChhhhHHHHHHHHhhcCCccEEEEEccceeecCC-CCccccCC-CCCCCCChhHHHHHHHHHHHHHhhhh
Q 017914 136 GT-------GDPMLKHGELLRSTLMNGHLQWLGYLSSTGVYGHS-GGAWVDED-YPANPTTELGRLRLSAEKGWLNLGRD 206 (364)
Q Consensus 136 ~~-------~~~~~~~~~~l~~a~~~~~~~r~v~~Ss~~vy~~~-~~~~~~E~-~~~~~~~~Y~~sK~~~E~~~~~~~~~ 206 (364)
.. .......+.|++++++..++++|||.||.++|+.. ...+++|+ .+..|.++|+.+|.++|+.++.+...
T Consensus 80 ~~~~~~~~~~~~nv~gt~~ll~aa~~~~~~~~v~~ss~~~~~~~~~~~~~~E~~~~~~p~~~Yg~sK~~~E~~~~~~~~~ 159 (314)
T COG0451 80 SNASDPAEFLDVNVDGTLNLLEAARAAGVKRFVFASSVSVVYGDPPPLPIDEDLGPPRPLNPYGVSKLAAEQLLRAYARL 159 (314)
T ss_pred hhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCCCceECCCCCCCCcccccCCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 32 23445667899999998899999999888877754 34478898 68888889999999999999999887
Q ss_pred cCCcEEEEEecceecCCCCh------HHHHHHh--cCcccccccccCCcccccccHHHHHHHHHHHccCCCCCceEEEeC
Q 017914 207 LGISAQVFRLGGIYGPGRSS------VDTIIKQ--LPLSEGQKMRRARQYTSRIHVDDICQVLSASIDKPSAWNVYNVVD 278 (364)
Q Consensus 207 ~~~~~~ilRp~~v~g~~~~~------~~~~~~~--~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~~g~~~~i~~ 278 (364)
++++++++||+++||++... ...++.. .........+++.+.++|+|++|++++++.+++++..+ .||+++
T Consensus 160 ~~~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~-~~ni~~ 238 (314)
T COG0451 160 YGLPVVILRPFNVYGPGDKPDLSSGVVSAFIRQLLKGEPIIVIGGDGSQTRDFVYVDDVADALLLALENPDGG-VFNIGS 238 (314)
T ss_pred hCCCeEEEeeeeeeCCCCCCCCCcCcHHHHHHHHHhCCCcceEeCCCceeEeeEeHHHHHHHHHHHHhCCCCc-EEEeCC
Confidence 89999999999999998532 2221211 11111222345677789999999999999999998777 999999
Q ss_pred CC-CCCHHHHHHHHHHHhcCCCCCcccCCCCCCCCCCCccCCCCCCCeEEEchhHHHhcCcccCCCCHHHHHHHHHHHhc
Q 017914 279 DD-PAPREEVFAYAWDLVEKKWPGLLKHRKPRENTESSNEKGSSRGEKRVSNVRMKKELGVRLWHPSYKSGLQSIINQMD 357 (364)
Q Consensus 279 ~~-~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~e~l~~~~~~~~ 357 (364)
+. .++++|+++.+.+.+|.+.+..... .. ...........+|++|++++|||+|++ ++++++.++++|+.
T Consensus 239 ~~~~~~~~e~~~~~~~~~~~~~~~~~~~------~~--~~~~~~~~~~~~~~~~~~~~lg~~p~~-~~~~~i~~~~~~~~ 309 (314)
T COG0451 239 GTAEITVRELAEAVAEAVGSKAPLIVYI------PL--GRRGDLREGKLLDISKARAALGWEPKV-SLEEGLADTLEWLL 309 (314)
T ss_pred CCCcEEHHHHHHHHHHHhCCCCcceeec------CC--CCCCcccccccCCHHHHHHHhCCCCCC-CHHHHHHHHHHHHH
Confidence 97 8999999999999999874421111 00 123345566788999999999999997 89999999999988
Q ss_pred ccC
Q 017914 358 QPY 360 (364)
Q Consensus 358 ~~~ 360 (364)
.+.
T Consensus 310 ~~~ 312 (314)
T COG0451 310 KKL 312 (314)
T ss_pred Hhh
Confidence 654
|
|
| >PLN02650 dihydroflavonol-4-reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-36 Score=278.78 Aligned_cols=286 Identities=14% Similarity=0.143 Sum_probs=203.0
Q ss_pred CCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhh--------CCceEEEccCChhhH--HhhccCceeeE
Q 017914 58 SPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQ--------SGFDVHLFNANETAL--MILTTLKNYTH 126 (364)
Q Consensus 58 ~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~--------~~~~~~~~D~~~~~~--~~~~~~d~v~~ 126 (364)
..++||||| +||||++|+++|+++|++|++++|+......+.. ..+.++.+|++|.+. ..+.++|.|+|
T Consensus 4 ~~k~iLVTGatGfIGs~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~d~ViH 83 (351)
T PLN02650 4 QKETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPANVKKVKHLLDLPGATTRLTLWKADLAVEGSFDDAIRGCTGVFH 83 (351)
T ss_pred CCCEEEEeCCcHHHHHHHHHHHHHCCCEEEEEEcCcchhHHHHHHHhccCCCCceEEEEecCCChhhHHHHHhCCCEEEE
Confidence 347999999 9999999999999999999999997654332211 246789999999764 66788999999
Q ss_pred EEEecCCCCC-----CCChhhhHHHHHHHHhhcCC-ccEEEEEccceeecCC-CCcc-ccCCCC---------CCCCChh
Q 017914 127 LLVSIPPLEG-----TGDPMLKHGELLRSTLMNGH-LQWLGYLSSTGVYGHS-GGAW-VDEDYP---------ANPTTEL 189 (364)
Q Consensus 127 ~~~~~~~~~~-----~~~~~~~~~~~l~~a~~~~~-~~r~v~~Ss~~vy~~~-~~~~-~~E~~~---------~~~~~~Y 189 (364)
+++....... ..+.......|+++++...+ ++||||+||.++|+.. ...+ ++|+.. ..+.++|
T Consensus 84 ~A~~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~~r~v~~SS~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~Y 163 (351)
T PLN02650 84 VATPMDFESKDPENEVIKPTVNGMLSIMKACAKAKTVRRIVFTSSAGTVNVEEHQKPVYDEDCWSDLDFCRRKKMTGWMY 163 (351)
T ss_pred eCCCCCCCCCCchhhhhhHHHHHHHHHHHHHHhcCCceEEEEecchhhcccCCCCCCccCcccCCchhhhhccccccchH
Confidence 9975432110 11122345568888887765 7899999998776543 2223 466532 1245689
Q ss_pred HHHHHHHHHHHHHhhhhcCCcEEEEEecceecCCCCh--HHHHHHhc--CcccccccccCCcccccccHHHHHHHHHHHc
Q 017914 190 GRLRLSAEKGWLNLGRDLGISAQVFRLGGIYGPGRSS--VDTIIKQL--PLSEGQKMRRARQYTSRIHVDDICQVLSASI 265 (364)
Q Consensus 190 ~~sK~~~E~~~~~~~~~~~~~~~ilRp~~v~g~~~~~--~~~~~~~~--~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l 265 (364)
+.+|..+|.+++.++++++++++++||+++||++... ...+.... ........+ ..+.++|+|++|+|++++.++
T Consensus 164 ~~sK~~~E~~~~~~~~~~gi~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~r~~v~V~Dva~a~~~~l 242 (351)
T PLN02650 164 FVSKTLAEKAAWKYAAENGLDFISIIPTLVVGPFISTSMPPSLITALSLITGNEAHYS-IIKQGQFVHLDDLCNAHIFLF 242 (351)
T ss_pred HHHHHHHHHHHHHHHHHcCCeEEEECCCceECCCCCCCCCccHHHHHHHhcCCccccC-cCCCcceeeHHHHHHHHHHHh
Confidence 9999999999999998889999999999999997432 11111110 001111111 123479999999999999999
Q ss_pred cCCCCCceEEEeCCCCCCHHHHHHHHHHHhcCC-CCCcccCCCCCCCCCCCccCCCCCCCeEEEchhHHHhcCcccCCCC
Q 017914 266 DKPSAWNVYNVVDDDPAPREEVFAYAWDLVEKK-WPGLLKHRKPRENTESSNEKGSSRGEKRVSNVRMKKELGVRLWHPS 344 (364)
Q Consensus 266 ~~~~~g~~~~i~~~~~~s~~el~~~i~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~ 344 (364)
+++..++.| +++++.+++.|+++.+.+.++.. .+.. . .. .........+|++|++ +|||+|++ +
T Consensus 243 ~~~~~~~~~-i~~~~~~s~~el~~~i~~~~~~~~~~~~--~------~~----~~~~~~~~~~d~~k~~-~lG~~p~~-~ 307 (351)
T PLN02650 243 EHPAAEGRY-ICSSHDATIHDLAKMLREKYPEYNIPAR--F------PG----IDEDLKSVEFSSKKLT-DLGFTFKY-S 307 (351)
T ss_pred cCcCcCceE-EecCCCcCHHHHHHHHHHhCcccCCCCC--C------CC----cCcccccccCChHHHH-HhCCCCCC-C
Confidence 887655588 56778899999999999987632 1111 0 00 0112233456889985 89999999 7
Q ss_pred HHHHHHHHHHHhccc
Q 017914 345 YKSGLQSIINQMDQP 359 (364)
Q Consensus 345 ~~e~l~~~~~~~~~~ 359 (364)
++|+|+++++|++++
T Consensus 308 l~egl~~~i~~~~~~ 322 (351)
T PLN02650 308 LEDMFDGAIETCREK 322 (351)
T ss_pred HHHHHHHHHHHHHHc
Confidence 999999999999864
|
|
| >KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-36 Score=262.13 Aligned_cols=286 Identities=17% Similarity=0.239 Sum_probs=214.4
Q ss_pred CCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhh---hhh-----CCceEEEccCChhhH--HhhccCceeeE
Q 017914 58 SPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKE---LEQ-----SGFDVHLFNANETAL--MILTTLKNYTH 126 (364)
Q Consensus 58 ~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~---l~~-----~~~~~~~~D~~~~~~--~~~~~~d~v~~ 126 (364)
.+++|+||| +||||++|+++|+++||.|++.+|++++.+. +.+ .+...+.+|+.|.+. .+++++|+|+|
T Consensus 5 ~~~~VcVTGAsGfIgswivk~LL~rGY~V~gtVR~~~~~k~~~~L~~l~~a~~~l~l~~aDL~d~~sf~~ai~gcdgVfH 84 (327)
T KOG1502|consen 5 EGKKVCVTGASGFIGSWIVKLLLSRGYTVRGTVRDPEDEKKTEHLRKLEGAKERLKLFKADLLDEGSFDKAIDGCDGVFH 84 (327)
T ss_pred CCcEEEEeCCchHHHHHHHHHHHhCCCEEEEEEcCcchhhhHHHHHhcccCcccceEEeccccccchHHHHHhCCCEEEE
Confidence 568999999 9999999999999999999999999887332 221 358899999999885 88999999999
Q ss_pred EEEecCCCCC-----CCChhhhHHHHHHHHhhcCC-ccEEEEEccceeecC-----CCCccccCCCCCCC------CChh
Q 017914 127 LLVSIPPLEG-----TGDPMLKHGELLRSTLMNGH-LQWLGYLSSTGVYGH-----SGGAWVDEDYPANP------TTEL 189 (364)
Q Consensus 127 ~~~~~~~~~~-----~~~~~~~~~~~l~~a~~~~~-~~r~v~~Ss~~vy~~-----~~~~~~~E~~~~~~------~~~Y 189 (364)
+|........ .-++...++.|++++|++.. |||+||+||.+.-.. ..+..++|+...++ ...|
T Consensus 85 ~Asp~~~~~~~~e~~li~pav~Gt~nVL~ac~~~~sVkrvV~TSS~aAv~~~~~~~~~~~vvdE~~wsd~~~~~~~~~~Y 164 (327)
T KOG1502|consen 85 TASPVDFDLEDPEKELIDPAVKGTKNVLEACKKTKSVKRVVYTSSTAAVRYNGPNIGENSVVDEESWSDLDFCRCKKLWY 164 (327)
T ss_pred eCccCCCCCCCcHHhhhhHHHHHHHHHHHHHhccCCcceEEEeccHHHhccCCcCCCCCcccccccCCcHHHHHhhHHHH
Confidence 9988766432 34567788899999999776 999999998764432 22345777765432 3579
Q ss_pred HHHHHHHHHHHHHhhhhcCCcEEEEEecceecCCCCh-----HHHHHHhcCcccccccccCCcccccccHHHHHHHHHHH
Q 017914 190 GRLRLSAEKGWLNLGRDLGISAQVFRLGGIYGPGRSS-----VDTIIKQLPLSEGQKMRRARQYTSRIHVDDICQVLSAS 264 (364)
Q Consensus 190 ~~sK~~~E~~~~~~~~~~~~~~~ilRp~~v~g~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~ 264 (364)
..+|..+|+..++++++.+++.+++.|+.|+||.-.. ...++.. ..+..-...+....|+|++|||.|++.+
T Consensus 165 ~~sK~lAEkaAw~fa~e~~~~lv~inP~lV~GP~l~~~l~~s~~~~l~~---i~G~~~~~~n~~~~~VdVrDVA~AHv~a 241 (327)
T KOG1502|consen 165 ALSKTLAEKAAWEFAKENGLDLVTINPGLVFGPGLQPSLNSSLNALLKL---IKGLAETYPNFWLAFVDVRDVALAHVLA 241 (327)
T ss_pred HHHHHHHHHHHHHHHHhCCccEEEecCCceECCCcccccchhHHHHHHH---HhcccccCCCCceeeEeHHHHHHHHHHH
Confidence 9999999999999999999999999999999997432 1111111 1111111123344589999999999999
Q ss_pred ccCCCCCceEEEeCCCCCCHHHHHHHHHHHhcCCCCCcccCCCCCCCCCCCccCCCCCCCeEEEchhHHHhcCcccCCCC
Q 017914 265 IDKPSAWNVYNVVDDDPAPREEVFAYAWDLVEKKWPGLLKHRKPRENTESSNEKGSSRGEKRVSNVRMKKELGVRLWHPS 344 (364)
Q Consensus 265 l~~~~~g~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~ 344 (364)
++++..++.|.+.++ ..++.|+++++.+.+... + ++. ...+..+.......++++|+++..||+++ +
T Consensus 242 ~E~~~a~GRyic~~~-~~~~~ei~~~l~~~~P~~-~--ip~-------~~~~~~~~~~~~~~~~~~k~k~lg~~~~~--~ 308 (327)
T KOG1502|consen 242 LEKPSAKGRYICVGE-VVSIKEIADILRELFPDY-P--IPK-------KNAEEHEGFLTSFKVSSEKLKSLGGFKFR--P 308 (327)
T ss_pred HcCcccCceEEEecC-cccHHHHHHHHHHhCCCC-C--CCC-------CCCccccccccccccccHHHHhcccceec--C
Confidence 999988889988774 566999999999998543 1 111 11111122333346899999854447765 7
Q ss_pred HHHHHHHHHHHhccc
Q 017914 345 YKSGLQSIINQMDQP 359 (364)
Q Consensus 345 ~~e~l~~~~~~~~~~ 359 (364)
++|.+.++++++++.
T Consensus 309 l~e~~~dt~~sl~~~ 323 (327)
T KOG1502|consen 309 LEETLSDTVESLREK 323 (327)
T ss_pred hHHHHHHHHHHHHHh
Confidence 999999999999863
|
|
| >PLN00016 RNA-binding protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-36 Score=280.44 Aligned_cols=283 Identities=18% Similarity=0.138 Sum_probs=209.4
Q ss_pred CCCCCeEEEE----c-CChhhHHHHHHHHhCCCEEEEEEeCchhhh-----------hhhhCCceEEEccCChhhH-Hhh
Q 017914 56 WQSPNRMLIL----G-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKK-----------ELEQSGFDVHLFNANETAL-MIL 118 (364)
Q Consensus 56 ~~~~~~vlVt----G-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-----------~l~~~~~~~~~~D~~~~~~-~~~ 118 (364)
..++++|||| | |||||++|+++|+++||+|++++|+..... .+...+++++.+|+.|.+. ...
T Consensus 49 ~~~~~~VLVt~~~~GatG~iG~~lv~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~~~~~ 128 (378)
T PLN00016 49 AVEKKKVLIVNTNSGGHAFIGFYLAKELVKAGHEVTLFTRGKEPSQKMKKEPFSRFSELSSAGVKTVWGDPADVKSKVAG 128 (378)
T ss_pred ccccceEEEEeccCCCceeEhHHHHHHHHHCCCEEEEEecCCcchhhhccCchhhhhHhhhcCceEEEecHHHHHhhhcc
Confidence 3456899999 9 999999999999999999999999865422 2223468999999988332 223
Q ss_pred ccCceeeEEEEecCCCCCCCChhhhHHHHHHHHhhcCCccEEEEEccceeecCCCCccccCCCCCCCCChhHHHHHHHHH
Q 017914 119 TTLKNYTHLLVSIPPLEGTGDPMLKHGELLRSTLMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANPTTELGRLRLSAEK 198 (364)
Q Consensus 119 ~~~d~v~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~~sK~~~E~ 198 (364)
.++|+|+|+++. ......++++++++.|+++|||+||.++|+.....+..|+.+..|.. +|..+|.
T Consensus 129 ~~~d~Vi~~~~~----------~~~~~~~ll~aa~~~gvkr~V~~SS~~vyg~~~~~p~~E~~~~~p~~----sK~~~E~ 194 (378)
T PLN00016 129 AGFDVVYDNNGK----------DLDEVEPVADWAKSPGLKQFLFCSSAGVYKKSDEPPHVEGDAVKPKA----GHLEVEA 194 (378)
T ss_pred CCccEEEeCCCC----------CHHHHHHHHHHHHHcCCCEEEEEccHhhcCCCCCCCCCCCCcCCCcc----hHHHHHH
Confidence 578999997531 13456789999999999999999999999977666778877766543 7999998
Q ss_pred HHHHhhhhcCCcEEEEEecceecCCCC--hHHHHHHhcCcc-cccccccCCcccccccHHHHHHHHHHHccCCC-CCceE
Q 017914 199 GWLNLGRDLGISAQVFRLGGIYGPGRS--SVDTIIKQLPLS-EGQKMRRARQYTSRIHVDDICQVLSASIDKPS-AWNVY 274 (364)
Q Consensus 199 ~~~~~~~~~~~~~~ilRp~~v~g~~~~--~~~~~~~~~~~~-~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~-~g~~~ 274 (364)
+++ +.+++++++||+++||++.. ....+.....-. .....+.+.+.++|+|++|+|++++.+++++. .+++|
T Consensus 195 ~l~----~~~l~~~ilRp~~vyG~~~~~~~~~~~~~~~~~~~~i~~~g~g~~~~~~i~v~Dva~ai~~~l~~~~~~~~~y 270 (378)
T PLN00016 195 YLQ----KLGVNWTSFRPQYIYGPGNNKDCEEWFFDRLVRGRPVPIPGSGIQLTQLGHVKDLASMFALVVGNPKAAGQIF 270 (378)
T ss_pred HHH----HcCCCeEEEeceeEECCCCCCchHHHHHHHHHcCCceeecCCCCeeeceecHHHHHHHHHHHhcCccccCCEE
Confidence 875 35899999999999998643 222222221111 11123567888999999999999999998863 47899
Q ss_pred EEeCCCCCCHHHHHHHHHHHhcCCCCCcccCCCCCCCCCCCccCCCCCCCeEEEchhHHHhcCcccCCCCHHHHHHHHHH
Q 017914 275 NVVDDDPAPREEVFAYAWDLVEKKWPGLLKHRKPRENTESSNEKGSSRGEKRVSNVRMKKELGVRLWHPSYKSGLQSIIN 354 (364)
Q Consensus 275 ~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~e~l~~~~~ 354 (364)
|+++++.+|+.|+++.+.+.+|.+. ..........................+|++|++++|||+|++ +++|+|+++++
T Consensus 271 ni~~~~~~s~~el~~~i~~~~g~~~-~i~~~~~~~~~~~~~~~~p~~~~~~~~d~~ka~~~LGw~p~~-~l~egl~~~~~ 348 (378)
T PLN00016 271 NIVSDRAVTFDGMAKACAKAAGFPE-EIVHYDPKAVGFGAKKAFPFRDQHFFASPRKAKEELGWTPKF-DLVEDLKDRYE 348 (378)
T ss_pred EecCCCccCHHHHHHHHHHHhCCCC-ceeecCccccCccccccccccccccccCHHHHHHhcCCCCCC-CHHHHHHHHHH
Confidence 9999999999999999999999873 222111100000000001112334557999999999999999 89999999999
Q ss_pred Hhcc
Q 017914 355 QMDQ 358 (364)
Q Consensus 355 ~~~~ 358 (364)
|+++
T Consensus 349 ~~~~ 352 (378)
T PLN00016 349 LYFG 352 (378)
T ss_pred HHHh
Confidence 9975
|
|
| >TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-36 Score=273.67 Aligned_cols=289 Identities=18% Similarity=0.222 Sum_probs=216.7
Q ss_pred eEEEEc-CChhhHHHHHHHHhCC--CEEEEEEeCc--hhhh---hhh-hCCceEEEccCChhhH--Hhhcc--CceeeEE
Q 017914 61 RMLILG-MGFVGRIFAEKIKNQG--WVVSGTCTNV--MKKK---ELE-QSGFDVHLFNANETAL--MILTT--LKNYTHL 127 (364)
Q Consensus 61 ~vlVtG-tG~iG~~l~~~L~~~g--~~V~~~~r~~--~~~~---~l~-~~~~~~~~~D~~~~~~--~~~~~--~d~v~~~ 127 (364)
+||||| ||+||++++++|+++| ++|++++|.. .+.. .+. ..+++++.+|++|++. .++++ +|+|+|+
T Consensus 1 ~ilItGatG~iG~~l~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~vi~~ 80 (317)
T TIGR01181 1 RILVTGGAGFIGSNFVRYILNEHPDAEVIVLDKLTYAGNLENLADLEDNPRYRFVKGDIGDRELVSRLFTEHQPDAVVHF 80 (317)
T ss_pred CEEEEcCCchHHHHHHHHHHHhCCCCEEEEecCCCcchhhhhhhhhccCCCcEEEEcCCcCHHHHHHHHhhcCCCEEEEc
Confidence 589999 9999999999999987 7899988632 1111 111 1367889999999774 55665 8999999
Q ss_pred EEecCCCCCCCCh------hhhHHHHHHHHhhcCCcc-EEEEEccceeecCCCCc-cccCCCCCCCCChhHHHHHHHHHH
Q 017914 128 LVSIPPLEGTGDP------MLKHGELLRSTLMNGHLQ-WLGYLSSTGVYGHSGGA-WVDEDYPANPTTELGRLRLSAEKG 199 (364)
Q Consensus 128 ~~~~~~~~~~~~~------~~~~~~~l~~a~~~~~~~-r~v~~Ss~~vy~~~~~~-~~~E~~~~~~~~~Y~~sK~~~E~~ 199 (364)
++.........+. ......++++++...+.+ ++||+||..+||..... +++|+.+..|.+.|+.+|..+|.+
T Consensus 81 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~v~g~~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~ 160 (317)
T TIGR01181 81 AAESHVDRSISGPAAFIETNVVGTYTLLEAVRKYWHEFRFHHISTDEVYGDLEKGDAFTETTPLAPSSPYSASKAASDHL 160 (317)
T ss_pred ccccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCceEEEeeccceeCCCCCCCCcCCCCCCCCCCchHHHHHHHHHH
Confidence 9865432221111 223345677777765433 89999999999965443 688888888899999999999999
Q ss_pred HHHhhhhcCCcEEEEEecceecCCC---ChHHHHHHhcCcc-cccccccCCcccccccHHHHHHHHHHHccCCCCCceEE
Q 017914 200 WLNLGRDLGISAQVFRLGGIYGPGR---SSVDTIIKQLPLS-EGQKMRRARQYTSRIHVDDICQVLSASIDKPSAWNVYN 275 (364)
Q Consensus 200 ~~~~~~~~~~~~~ilRp~~v~g~~~---~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~~g~~~~ 275 (364)
++.++.+.+++++++||+.+||+.. ..+..++...... ....++.+++.++|+|++|+|+++..++++...+++||
T Consensus 161 ~~~~~~~~~~~~~i~R~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~ 240 (317)
T TIGR01181 161 VRAYHRTYGLPALITRCSNNYGPYQFPEKLIPLMITNALAGKPLPVYGDGQQVRDWLYVEDHCRAIYLVLEKGRVGETYN 240 (317)
T ss_pred HHHHHHHhCCCeEEEEeccccCCCCCcccHHHHHHHHHhcCCCceEeCCCceEEeeEEHHHHHHHHHHHHcCCCCCceEE
Confidence 9998888899999999999999874 2344443331111 11234567888999999999999999998776788999
Q ss_pred EeCCCCCCHHHHHHHHHHHhcCCCCCcccCCCCCCCCCCCccCCCCCCCeEEEchhHHHhcCcccCCCCHHHHHHHHHHH
Q 017914 276 VVDDDPAPREEVFAYAWDLVEKKWPGLLKHRKPRENTESSNEKGSSRGEKRVSNVRMKKELGVRLWHPSYKSGLQSIINQ 355 (364)
Q Consensus 276 i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~e~l~~~~~~ 355 (364)
+++++.++++|+++.+.+.+|.+.+ .+... .. .........+|++|+++.|||+|++ +++|+++++++|
T Consensus 241 ~~~~~~~s~~~~~~~i~~~~~~~~~-~~~~~-----~~----~~~~~~~~~~~~~k~~~~lG~~p~~-~~~~~i~~~~~~ 309 (317)
T TIGR01181 241 IGGGNERTNLEVVETILELLGKDED-LITHV-----ED----RPGHDRRYAIDASKIKRELGWAPKY-TFEEGLRKTVQW 309 (317)
T ss_pred eCCCCceeHHHHHHHHHHHhCCCcc-ccccc-----CC----CccchhhhcCCHHHHHHHhCCCCCC-cHHHHHHHHHHH
Confidence 9999999999999999999997522 11110 00 0011223357999999999999999 799999999999
Q ss_pred hcccC
Q 017914 356 MDQPY 360 (364)
Q Consensus 356 ~~~~~ 360 (364)
++++.
T Consensus 310 ~~~~~ 314 (317)
T TIGR01181 310 YLDNE 314 (317)
T ss_pred HHhcc
Confidence 98864
|
This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor. |
| >PLN02662 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-36 Score=276.00 Aligned_cols=283 Identities=16% Similarity=0.183 Sum_probs=205.7
Q ss_pred CCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhh---hh-----hCCceEEEccCChhh-H-HhhccCceeeEE
Q 017914 59 PNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKE---LE-----QSGFDVHLFNANETA-L-MILTTLKNYTHL 127 (364)
Q Consensus 59 ~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~---l~-----~~~~~~~~~D~~~~~-~-~~~~~~d~v~~~ 127 (364)
+++||||| +||||++|+++|+++|++|++++|+...... +. ..+++++.+|++|++ + .+++++|.|+|+
T Consensus 4 ~~~ilVtGatGfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih~ 83 (322)
T PLN02662 4 GKVVCVTGASGYIASWLVKLLLQRGYTVKATVRDPNDPKKTEHLLALDGAKERLHLFKANLLEEGSFDSVVDGCEGVFHT 83 (322)
T ss_pred CCEEEEECChHHHHHHHHHHHHHCCCEEEEEEcCCCchhhHHHHHhccCCCCceEEEeccccCcchHHHHHcCCCEEEEe
Confidence 47999999 9999999999999999999999997653221 11 136789999999976 3 667889999999
Q ss_pred EEecCCCCCCC-----ChhhhHHHHHHHHhhcC-CccEEEEEccce--eecCC---CCccccCCCCCCC------CChhH
Q 017914 128 LVSIPPLEGTG-----DPMLKHGELLRSTLMNG-HLQWLGYLSSTG--VYGHS---GGAWVDEDYPANP------TTELG 190 (364)
Q Consensus 128 ~~~~~~~~~~~-----~~~~~~~~~l~~a~~~~-~~~r~v~~Ss~~--vy~~~---~~~~~~E~~~~~~------~~~Y~ 190 (364)
++......... +.......|+++++.+. +++||||+||.+ +|+.. ...+++|+.+..| .+.|+
T Consensus 84 A~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~v~~SS~~~~~y~~~~~~~~~~~~E~~~~~p~~~~~~~~~Y~ 163 (322)
T PLN02662 84 ASPFYHDVTDPQAELIDPAVKGTLNVLRSCAKVPSVKRVVVTSSMAAVAYNGKPLTPDVVVDETWFSDPAFCEESKLWYV 163 (322)
T ss_pred CCcccCCCCChHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEccCHHHhcCCCcCCCCCCcCCcccCCChhHhhcccchHH
Confidence 97643211111 11234556888887766 889999999976 46532 2345788776555 25899
Q ss_pred HHHHHHHHHHHHhhhhcCCcEEEEEecceecCCCCh----HHHHHHhcCcccccccccCCcccccccHHHHHHHHHHHcc
Q 017914 191 RLRLSAEKGWLNLGRDLGISAQVFRLGGIYGPGRSS----VDTIIKQLPLSEGQKMRRARQYTSRIHVDDICQVLSASID 266 (364)
Q Consensus 191 ~sK~~~E~~~~~~~~~~~~~~~ilRp~~v~g~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~ 266 (364)
.+|..+|++++.+.++.+++++++||+++||+.... ....+... +. +.. ..+.+.++|||++|+|++++.+++
T Consensus 164 ~sK~~~E~~~~~~~~~~~~~~~~lRp~~v~Gp~~~~~~~~~~~~~~~~-~~-~~~-~~~~~~~~~i~v~Dva~a~~~~~~ 240 (322)
T PLN02662 164 LSKTLAEEAAWKFAKENGIDMVTINPAMVIGPLLQPTLNTSAEAILNL-IN-GAQ-TFPNASYRWVDVRDVANAHIQAFE 240 (322)
T ss_pred HHHHHHHHHHHHHHHHcCCcEEEEeCCcccCCCCCCCCCchHHHHHHH-hc-CCc-cCCCCCcCeEEHHHHHHHHHHHhc
Confidence 999999999999988889999999999999997432 11111110 00 111 123467899999999999999999
Q ss_pred CCCCCceEEEeCCCCCCHHHHHHHHHHHhcCCCCCcccCCCCCCCCCCCccCCCCCCCeEEEchhHHHhcCcccCCCCHH
Q 017914 267 KPSAWNVYNVVDDDPAPREEVFAYAWDLVEKKWPGLLKHRKPRENTESSNEKGSSRGEKRVSNVRMKKELGVRLWHPSYK 346 (364)
Q Consensus 267 ~~~~g~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~ 346 (364)
++..++.||++ ++.++++|+++.+.+.++.. +..... .+ .........+|++|++ +|||++ + +++
T Consensus 241 ~~~~~~~~~~~-g~~~s~~e~~~~i~~~~~~~-~~~~~~--------~~--~~~~~~~~~~d~~k~~-~lg~~~-~-~~~ 305 (322)
T PLN02662 241 IPSASGRYCLV-ERVVHYSEVVKILHELYPTL-QLPEKC--------AD--DKPYVPTYQVSKEKAK-SLGIEF-I-PLE 305 (322)
T ss_pred CcCcCCcEEEe-CCCCCHHHHHHHHHHHCCCC-CCCCCC--------CC--ccccccccccChHHHH-HhCCcc-c-cHH
Confidence 87555589887 57899999999999987632 111000 00 0112234578999998 599996 5 799
Q ss_pred HHHHHHHHHhccc
Q 017914 347 SGLQSIINQMDQP 359 (364)
Q Consensus 347 e~l~~~~~~~~~~ 359 (364)
|+|+++++|++++
T Consensus 306 ~~l~~~~~~~~~~ 318 (322)
T PLN02662 306 VSLKDTVESLKEK 318 (322)
T ss_pred HHHHHHHHHHHHc
Confidence 9999999999864
|
|
| >KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-36 Score=257.50 Aligned_cols=292 Identities=15% Similarity=0.153 Sum_probs=231.7
Q ss_pred CCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchh-------hhhhh--hCCceEEEccCChhhH--Hhh--ccCcee
Q 017914 59 PNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMK-------KKELE--QSGFDVHLFNANETAL--MIL--TTLKNY 124 (364)
Q Consensus 59 ~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~-------~~~l~--~~~~~~~~~D~~~~~~--~~~--~~~d~v 124 (364)
.++||||| +||||+|.+-+|+++|+.|++++.-... ...+. ..++.++++|+.|.+. +.+ ..+|.|
T Consensus 2 ~~~VLVtGgaGyiGsht~l~L~~~gy~v~~vDNl~n~~~~sl~r~~~l~~~~~~v~f~~~Dl~D~~~L~kvF~~~~fd~V 81 (343)
T KOG1371|consen 2 GKHVLVTGGAGYIGSHTVLALLKRGYGVVIVDNLNNSYLESLKRVRQLLGEGKSVFFVEGDLNDAEALEKLFSEVKFDAV 81 (343)
T ss_pred CcEEEEecCCcceehHHHHHHHhCCCcEEEEecccccchhHHHHHHHhcCCCCceEEEEeccCCHHHHHHHHhhcCCceE
Confidence 47899998 9999999999999999999999863211 11222 2678999999999774 444 568999
Q ss_pred eEEEEecCCCCCCCChh------hhHHHHHHHHhhcCCccEEEEEccceeecCCCCccccCCCCCC-CCChhHHHHHHHH
Q 017914 125 THLLVSIPPLEGTGDPM------LKHGELLRSTLMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPAN-PTTELGRLRLSAE 197 (364)
Q Consensus 125 ~~~~~~~~~~~~~~~~~------~~~~~~l~~a~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~-~~~~Y~~sK~~~E 197 (364)
+|+++......+..++. ...+.|+++++++.+++.+||.||+.+||.....|++|+++.. |.++|+.+|...|
T Consensus 82 ~Hfa~~~~vgeS~~~p~~Y~~nNi~gtlnlLe~~~~~~~~~~V~sssatvYG~p~~ip~te~~~t~~p~~pyg~tK~~iE 161 (343)
T KOG1371|consen 82 MHFAALAAVGESMENPLSYYHNNIAGTLNLLEVMKAHNVKALVFSSSATVYGLPTKVPITEEDPTDQPTNPYGKTKKAIE 161 (343)
T ss_pred EeehhhhccchhhhCchhheehhhhhHHHHHHHHHHcCCceEEEecceeeecCcceeeccCcCCCCCCCCcchhhhHHHH
Confidence 99999888766655543 3445688888999999999999999999999999999999998 9999999999999
Q ss_pred HHHHHhhhhcCCcEEEEEecceecCC--CC----h---HHHHH---Hh------cCc---ccccccccCCcccccccHHH
Q 017914 198 KGWLNLGRDLGISAQVFRLGGIYGPG--RS----S---VDTII---KQ------LPL---SEGQKMRRARQYTSRIHVDD 256 (364)
Q Consensus 198 ~~~~~~~~~~~~~~~ilRp~~v~g~~--~~----~---~~~~~---~~------~~~---~~~~~~~~~~~~~~~i~v~D 256 (364)
+++..+....++.++.||..+++|.. .. + ...++ .+ ..+ ...-...+|...++|||+-|
T Consensus 162 ~i~~d~~~~~~~~~~~LRyfn~~ga~p~Gr~ge~p~~~~nnl~p~v~~vaigr~~~l~v~g~d~~t~dgt~vrdyi~v~D 241 (343)
T KOG1371|consen 162 EIIHDYNKAYGWKVTGLRYFNVIGAHPSGRIGEAPLGIPNNLLPYVFQVAIGRRPNLQVVGRDYTTIDGTIVRDYIHVLD 241 (343)
T ss_pred HHHHhhhccccceEEEEEeccccCccccCccCCCCccCcccccccccchhhcccccceeecCcccccCCCeeecceeeEe
Confidence 99999998888999999999999932 11 1 11111 11 111 11112235678899999999
Q ss_pred HHHHHHHHccCCCC---CceEEEeCCCCCCHHHHHHHHHHHhcCCCCCcccCCCCCCCCCCCccCCCCCCCeEEEchhHH
Q 017914 257 ICQVLSASIDKPSA---WNVYNVVDDDPAPREEVFAYAWDLVEKKWPGLLKHRKPRENTESSNEKGSSRGEKRVSNVRMK 333 (364)
Q Consensus 257 va~~~~~~l~~~~~---g~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~ 333 (364)
+|+.++.++.+... -++||++.+...+..||++++++..|.+++..+.. ...........+.++++
T Consensus 242 la~~h~~al~k~~~~~~~~i~Nlgtg~g~~V~~lv~a~~k~~g~~~k~~~v~-----------~R~gdv~~~ya~~~~a~ 310 (343)
T KOG1371|consen 242 LADGHVAALGKLRGAAEFGVYNLGTGKGSSVLELVTAFEKALGVKIKKKVVP-----------RRNGDVAFVYANPSKAQ 310 (343)
T ss_pred hHHHHHHHhhccccchheeeEeecCCCCccHHHHHHHHHHHhcCCCCccccC-----------CCCCCceeeeeChHHHH
Confidence 99999999987643 24999999999999999999999999987644322 02223344678999999
Q ss_pred HhcCcccCCCCHHHHHHHHHHHhcccCCC
Q 017914 334 KELGVRLWHPSYKSGLQSIINQMDQPYQC 362 (364)
Q Consensus 334 ~~lG~~p~~~~~~e~l~~~~~~~~~~~~~ 362 (364)
++|||+|.+ +++|+++++++|..+|...
T Consensus 311 ~elgwk~~~-~iee~c~dlw~W~~~np~g 338 (343)
T KOG1371|consen 311 RELGWKAKY-GLQEMLKDLWRWQKQNPSG 338 (343)
T ss_pred HHhCCcccc-CHHHHHHHHHHHHhcCCCc
Confidence 999999999 8999999999999998764
|
|
| >PLN02989 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-36 Score=272.27 Aligned_cols=285 Identities=13% Similarity=0.136 Sum_probs=205.6
Q ss_pred CCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhh---h-----hCCceEEEccCChhhH--HhhccCceeeE
Q 017914 58 SPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKEL---E-----QSGFDVHLFNANETAL--MILTTLKNYTH 126 (364)
Q Consensus 58 ~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l---~-----~~~~~~~~~D~~~~~~--~~~~~~d~v~~ 126 (364)
.+|+||||| +||||++++++|+++|++|++++|+....... . ..+++++.+|++|.+. ..++++|.|+|
T Consensus 4 ~~k~vlVtG~~G~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vih 83 (325)
T PLN02989 4 GGKVVCVTGASGYIASWIVKLLLFRGYTINATVRDPKDRKKTDHLLALDGAKERLKLFKADLLDEGSFELAIDGCETVFH 83 (325)
T ss_pred CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCCcchhhHHHHHhccCCCCceEEEeCCCCCchHHHHHHcCCCEEEE
Confidence 358999999 99999999999999999999998876543221 1 1357889999999764 66788999999
Q ss_pred EEEecCCCCCCCCh------hhhHHHHHHHHhhc-CCccEEEEEccceeecCC-----CCccccCCCCCCC------CCh
Q 017914 127 LLVSIPPLEGTGDP------MLKHGELLRSTLMN-GHLQWLGYLSSTGVYGHS-----GGAWVDEDYPANP------TTE 188 (364)
Q Consensus 127 ~~~~~~~~~~~~~~------~~~~~~~l~~a~~~-~~~~r~v~~Ss~~vy~~~-----~~~~~~E~~~~~~------~~~ 188 (364)
+++.........+. ......++++++.. .++++||++||..+|+.. ...+++|+.+..| .++
T Consensus 84 ~A~~~~~~~~~~~~~~~~~~n~~g~~~ll~a~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~~E~~~~~p~~~~~~~~~ 163 (325)
T PLN02989 84 TASPVAITVKTDPQVELINPAVNGTINVLRTCTKVSSVKRVILTSSMAAVLAPETKLGPNDVVDETFFTNPSFAEERKQW 163 (325)
T ss_pred eCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHcCCceEEEEecchhheecCCccCCCCCccCcCCCCchhHhcccccc
Confidence 99854322222221 22334567777665 357899999998776532 2346788887765 368
Q ss_pred hHHHHHHHHHHHHHhhhhcCCcEEEEEecceecCCCCh----HHHHHHhcCcccccccccCCcccccccHHHHHHHHHHH
Q 017914 189 LGRLRLSAEKGWLNLGRDLGISAQVFRLGGIYGPGRSS----VDTIIKQLPLSEGQKMRRARQYTSRIHVDDICQVLSAS 264 (364)
Q Consensus 189 Y~~sK~~~E~~~~~~~~~~~~~~~ilRp~~v~g~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~ 264 (364)
|+.+|..+|.+++.+.+.++++++++||+++||++... ...++... +...... +.+.++|+|++|+|++++.+
T Consensus 164 Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~vyGp~~~~~~~~~~~~i~~~-~~~~~~~--~~~~r~~i~v~Dva~a~~~~ 240 (325)
T PLN02989 164 YVLSKTLAEDAAWRFAKDNEIDLIVLNPGLVTGPILQPTLNFSVAVIVEL-MKGKNPF--NTTHHRFVDVRDVALAHVKA 240 (325)
T ss_pred hHHHHHHHHHHHHHHHHHcCCeEEEEcCCceeCCCCCCCCCchHHHHHHH-HcCCCCC--CCcCcCeeEHHHHHHHHHHH
Confidence 99999999999999988889999999999999987532 11222110 0111111 23457999999999999999
Q ss_pred ccCCCCCceEEEeCCCCCCHHHHHHHHHHHhcCCCCCcccCCCCCCCCCCCccCCCCCCCeEEEchhHHHhcCcccCCCC
Q 017914 265 IDKPSAWNVYNVVDDDPAPREEVFAYAWDLVEKKWPGLLKHRKPRENTESSNEKGSSRGEKRVSNVRMKKELGVRLWHPS 344 (364)
Q Consensus 265 l~~~~~g~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~ 344 (364)
++++..+++||++ +..+|++|+++.+.+.++.. . +.. ..............+|++|++ +|||.|++ +
T Consensus 241 l~~~~~~~~~ni~-~~~~s~~ei~~~i~~~~~~~-~--~~~-------~~~~~~~~~~~~~~~~~~k~~-~lg~~p~~-~ 307 (325)
T PLN02989 241 LETPSANGRYIID-GPVVTIKDIENVLREFFPDL-C--IAD-------RNEDITELNSVTFNVCLDKVK-SLGIIEFT-P 307 (325)
T ss_pred hcCcccCceEEEe-cCCCCHHHHHHHHHHHCCCC-C--CCC-------CCCCcccccccCcCCCHHHHH-HcCCCCCC-C
Confidence 9887656699995 56899999999999998632 1 110 000001112234567899997 49999999 7
Q ss_pred HHHHHHHHHHHhcc
Q 017914 345 YKSGLQSIINQMDQ 358 (364)
Q Consensus 345 ~~e~l~~~~~~~~~ 358 (364)
++|+|+++++|+++
T Consensus 308 l~~gi~~~~~~~~~ 321 (325)
T PLN02989 308 TETSLRDTVLSLKE 321 (325)
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999999974
|
|
| >PLN02896 cinnamyl-alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-36 Score=275.05 Aligned_cols=288 Identities=13% Similarity=0.129 Sum_probs=204.1
Q ss_pred CCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhh-----hCCceEEEccCChhhH--HhhccCceeeEEEE
Q 017914 58 SPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELE-----QSGFDVHLFNANETAL--MILTTLKNYTHLLV 129 (364)
Q Consensus 58 ~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~-----~~~~~~~~~D~~~~~~--~~~~~~d~v~~~~~ 129 (364)
..|+||||| +||||++++++|+++|++|++++|+..+...+. ..+++++.+|++|.+. ..+.++|.|+|+++
T Consensus 9 ~~~~vLVtG~~GfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih~A~ 88 (353)
T PLN02896 9 ATGTYCVTGATGYIGSWLVKLLLQRGYTVHATLRDPAKSLHLLSKWKEGDRLRLFRADLQEEGSFDEAVKGCDGVFHVAA 88 (353)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhhccCCeEEEEECCCCCHHHHHHHHcCCCEEEECCc
Confidence 457999999 999999999999999999999999765443221 1357889999999764 66678999999998
Q ss_pred ecCCCC--CCCChh-----------hhHHHHHHHHhhcC-CccEEEEEccceeecCCC-----CccccCCC--CC-----
Q 017914 130 SIPPLE--GTGDPM-----------LKHGELLRSTLMNG-HLQWLGYLSSTGVYGHSG-----GAWVDEDY--PA----- 183 (364)
Q Consensus 130 ~~~~~~--~~~~~~-----------~~~~~~l~~a~~~~-~~~r~v~~Ss~~vy~~~~-----~~~~~E~~--~~----- 183 (364)
...... ...++. .....++++++.+. ++++|||+||.++|+... ..+++|+. |.
T Consensus 89 ~~~~~~~~~~~~~~~~~~~n~~~~~~~g~~~ll~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~~~E~~~~p~~~~~~ 168 (353)
T PLN02896 89 SMEFDVSSDHNNIEEYVQSKVIDPAIKGTLNVLKSCLKSKTVKRVVFTSSISTLTAKDSNGRWRAVVDETCQTPIDHVWN 168 (353)
T ss_pred cccCCccccccchhhhhhHHhHHHHHHHHHHHHHHHHhcCCccEEEEEechhhccccccCCCCCCccCcccCCcHHHhhc
Confidence 754332 111111 13456778887665 488999999999998432 13567763 21
Q ss_pred --CCCChhHHHHHHHHHHHHHhhhhcCCcEEEEEecceecCCCC-----hHHHHHHhc--Ccccccccc---cCCccccc
Q 017914 184 --NPTTELGRLRLSAEKGWLNLGRDLGISAQVFRLGGIYGPGRS-----SVDTIIKQL--PLSEGQKMR---RARQYTSR 251 (364)
Q Consensus 184 --~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilRp~~v~g~~~~-----~~~~~~~~~--~~~~~~~~~---~~~~~~~~ 251 (364)
.+.++|+.+|.++|++++.+++.++++++++||+++||++.. .+..+.... ........+ .....++|
T Consensus 169 ~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~df 248 (353)
T PLN02896 169 TKASGWVYVLSKLLTEEAAFKYAKENGIDLVSVITTTVAGPFLTPSVPSSIQVLLSPITGDSKLFSILSAVNSRMGSIAL 248 (353)
T ss_pred cCCCCccHHHHHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCcCCCCCchHHHHHHHhcCCccccccccccccccCceeE
Confidence 234589999999999999999888999999999999999743 122222210 000000111 11124699
Q ss_pred ccHHHHHHHHHHHccCCCCCceEEEeCCCCCCHHHHHHHHHHHhcCCCCCcccCCCCCCCCCCCccCCCCCCCeEEEchh
Q 017914 252 IHVDDICQVLSASIDKPSAWNVYNVVDDDPAPREEVFAYAWDLVEKKWPGLLKHRKPRENTESSNEKGSSRGEKRVSNVR 331 (364)
Q Consensus 252 i~v~Dva~~~~~~l~~~~~g~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k 331 (364)
||++|+|++++.+++.+..++.|++ ++..++++|+++.+.+.++...+. +... . +. .......+|.+|
T Consensus 249 i~v~Dva~a~~~~l~~~~~~~~~~~-~~~~~s~~el~~~i~~~~~~~~~~-~~~~-----~--~~---~~~~~~~~~~~~ 316 (353)
T PLN02896 249 VHIEDICDAHIFLMEQTKAEGRYIC-CVDSYDMSELINHLSKEYPCSNIQ-VRLD-----E--EK---RGSIPSEISSKK 316 (353)
T ss_pred EeHHHHHHHHHHHHhCCCcCccEEe-cCCCCCHHHHHHHHHHhCCCCCcc-cccc-----c--cc---cCccccccCHHH
Confidence 9999999999999987655557864 667899999999999998632111 1110 0 00 011123468888
Q ss_pred HHHhcCcccCCCCHHHHHHHHHHHhccc
Q 017914 332 MKKELGVRLWHPSYKSGLQSIINQMDQP 359 (364)
Q Consensus 332 ~~~~lG~~p~~~~~~e~l~~~~~~~~~~ 359 (364)
++ +|||+|++ +++|+|+++++|++++
T Consensus 317 ~~-~lGw~p~~-~l~~~i~~~~~~~~~~ 342 (353)
T PLN02896 317 LR-DLGFEYKY-GIEEIIDQTIDCCVDH 342 (353)
T ss_pred HH-HcCCCccC-CHHHHHHHHHHHHHHC
Confidence 86 69999999 7999999999999863
|
|
| >PLN02986 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-36 Score=272.27 Aligned_cols=283 Identities=17% Similarity=0.198 Sum_probs=204.6
Q ss_pred CCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhh---hh-----hCCceEEEccCChhhH--HhhccCceeeE
Q 017914 58 SPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKE---LE-----QSGFDVHLFNANETAL--MILTTLKNYTH 126 (364)
Q Consensus 58 ~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~---l~-----~~~~~~~~~D~~~~~~--~~~~~~d~v~~ 126 (364)
.+++||||| +||||++++++|+++|++|+++.|+...... +. ..+++++.+|++|.+. ..++++|+|+|
T Consensus 4 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih 83 (322)
T PLN02986 4 GGKLVCVTGASGYIASWIVKLLLLRGYTVKATVRDLTDRKKTEHLLALDGAKERLKLFKADLLEESSFEQAIEGCDAVFH 83 (322)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCCcchHHHHHHHhccCCCCceEEEecCCCCcchHHHHHhCCCEEEE
Confidence 357999999 9999999999999999999999997654322 11 1357899999999764 66788999999
Q ss_pred EEEecCCCCC-----CCChhhhHHHHHHHHhhcC-CccEEEEEccceee--cCC---CCccccCCCCCC------CCChh
Q 017914 127 LLVSIPPLEG-----TGDPMLKHGELLRSTLMNG-HLQWLGYLSSTGVY--GHS---GGAWVDEDYPAN------PTTEL 189 (364)
Q Consensus 127 ~~~~~~~~~~-----~~~~~~~~~~~l~~a~~~~-~~~r~v~~Ss~~vy--~~~---~~~~~~E~~~~~------~~~~Y 189 (364)
+|+....... ..+.......|++++++.. +++||||+||.++| +.. .+.+++|+.+.. +.+.|
T Consensus 84 ~A~~~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~~~v~rvV~~SS~~~~~~~~~~~~~~~~~~E~~~~~p~~~~~~~~~Y 163 (322)
T PLN02986 84 TASPVFFTVKDPQTELIDPALKGTINVLNTCKETPSVKRVILTSSTAAVLFRQPPIEANDVVDETFFSDPSLCRETKNWY 163 (322)
T ss_pred eCCCcCCCCCCchhhhhHHHHHHHHHHHHHHHhcCCccEEEEecchhheecCCccCCCCCCcCcccCCChHHhhccccch
Confidence 9986432111 1122345567888888764 78999999998754 332 234577776543 35789
Q ss_pred HHHHHHHHHHHHHhhhhcCCcEEEEEecceecCCCCh----HHHHHHhcCcccccccccCCcccccccHHHHHHHHHHHc
Q 017914 190 GRLRLSAEKGWLNLGRDLGISAQVFRLGGIYGPGRSS----VDTIIKQLPLSEGQKMRRARQYTSRIHVDDICQVLSASI 265 (364)
Q Consensus 190 ~~sK~~~E~~~~~~~~~~~~~~~ilRp~~v~g~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l 265 (364)
+.+|..+|.+++++.++++++++++||+.+||+.... ...++.... .+... .+.+.++|||++|+|++++.++
T Consensus 164 ~~sK~~aE~~~~~~~~~~~~~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~--~g~~~-~~~~~~~~v~v~Dva~a~~~al 240 (322)
T PLN02986 164 PLSKILAENAAWEFAKDNGIDMVVLNPGFICGPLLQPTLNFSVELIVDFI--NGKNL-FNNRFYRFVDVRDVALAHIKAL 240 (322)
T ss_pred HHHHHHHHHHHHHHHHHhCCeEEEEcccceeCCCCCCCCCccHHHHHHHH--cCCCC-CCCcCcceeEHHHHHHHHHHHh
Confidence 9999999999999988889999999999999986432 111111100 01111 1356789999999999999999
Q ss_pred cCCCCCceEEEeCCCCCCHHHHHHHHHHHhcCCCCCcccCCCCCCCCCCCccCCCCCCCeEEEchhHHHhcCcccCCCCH
Q 017914 266 DKPSAWNVYNVVDDDPAPREEVFAYAWDLVEKKWPGLLKHRKPRENTESSNEKGSSRGEKRVSNVRMKKELGVRLWHPSY 345 (364)
Q Consensus 266 ~~~~~g~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~ 345 (364)
+++..++.||++ ++.+|++|+++++.+.++.- . ++.. .+. .+.......+|++|++ +|||+|+ ++
T Consensus 241 ~~~~~~~~yni~-~~~~s~~e~~~~i~~~~~~~-~--~~~~-------~~~-~~~~~~~~~~d~~~~~-~lg~~~~--~l 305 (322)
T PLN02986 241 ETPSANGRYIID-GPIMSVNDIIDILRELFPDL-C--IADT-------NEE-SEMNEMICKVCVEKVK-NLGVEFT--PM 305 (322)
T ss_pred cCcccCCcEEEe-cCCCCHHHHHHHHHHHCCCC-C--CCCC-------Ccc-ccccccCCccCHHHHH-HcCCccc--CH
Confidence 987666699995 56899999999999998621 1 1110 000 0111111347999996 6999986 69
Q ss_pred HHHHHHHHHHhcc
Q 017914 346 KSGLQSIINQMDQ 358 (364)
Q Consensus 346 ~e~l~~~~~~~~~ 358 (364)
+|+|+++++|+++
T Consensus 306 ~e~~~~~~~~~~~ 318 (322)
T PLN02986 306 KSSLRDTILSLKE 318 (322)
T ss_pred HHHHHHHHHHHHH
Confidence 9999999999876
|
|
| >PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-36 Score=271.28 Aligned_cols=272 Identities=17% Similarity=0.169 Sum_probs=205.8
Q ss_pred EEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCChhhH--Hhhc--cCceeeEEEEecCCCC-C
Q 017914 63 LILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETAL--MILT--TLKNYTHLLVSIPPLE-G 136 (364)
Q Consensus 63 lVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~--~~~~--~~d~v~~~~~~~~~~~-~ 136 (364)
|||| +||||++|+++|++.|++|+++.+. ..+|++|.+. ..++ ++|+|+|+|+...... .
T Consensus 1 lItGa~GfiG~~l~~~L~~~g~~v~~~~~~--------------~~~Dl~~~~~l~~~~~~~~~d~Vih~A~~~~~~~~~ 66 (306)
T PLN02725 1 FVAGHRGLVGSAIVRKLEALGFTNLVLRTH--------------KELDLTRQADVEAFFAKEKPTYVILAAAKVGGIHAN 66 (306)
T ss_pred CcccCCCcccHHHHHHHHhCCCcEEEeecc--------------ccCCCCCHHHHHHHHhccCCCEEEEeeeeecccchh
Confidence 6898 9999999999999999988866532 1478988663 4443 5799999998754211 1
Q ss_pred CCC------hhhhHHHHHHHHhhcCCccEEEEEccceeecCCCCccccCCC----CCCCCC-hhHHHHHHHHHHHHHhhh
Q 017914 137 TGD------PMLKHGELLRSTLMNGHLQWLGYLSSTGVYGHSGGAWVDEDY----PANPTT-ELGRLRLSAEKGWLNLGR 205 (364)
Q Consensus 137 ~~~------~~~~~~~~l~~a~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~----~~~~~~-~Y~~sK~~~E~~~~~~~~ 205 (364)
..+ .......++++++++.++++|||+||..||+.....+++|++ +..|.+ .|+.+|.++|++++.+.+
T Consensus 67 ~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~i~~SS~~vyg~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~e~~~~~~~~ 146 (306)
T PLN02725 67 MTYPADFIRENLQIQTNVIDAAYRHGVKKLLFLGSSCIYPKFAPQPIPETALLTGPPEPTNEWYAIAKIAGIKMCQAYRI 146 (306)
T ss_pred hhCcHHHHHHHhHHHHHHHHHHHHcCCCeEEEeCceeecCCCCCCCCCHHHhccCCCCCCcchHHHHHHHHHHHHHHHHH
Confidence 111 223456789999998899999999999999976677788876 445544 599999999999999888
Q ss_pred hcCCcEEEEEecceecCCCC-------hHHHHHH----hcCccccc--ccccCCcccccccHHHHHHHHHHHccCCCCCc
Q 017914 206 DLGISAQVFRLGGIYGPGRS-------SVDTIIK----QLPLSEGQ--KMRRARQYTSRIHVDDICQVLSASIDKPSAWN 272 (364)
Q Consensus 206 ~~~~~~~ilRp~~v~g~~~~-------~~~~~~~----~~~~~~~~--~~~~~~~~~~~i~v~Dva~~~~~~l~~~~~g~ 272 (364)
..+++++++||+.+||++.. .+..++. ........ ..+.+.+.++|||++|++++++.+++....++
T Consensus 147 ~~~~~~~~~R~~~vyG~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dv~~~~~~~~~~~~~~~ 226 (306)
T PLN02725 147 QYGWDAISGMPTNLYGPHDNFHPENSHVIPALIRRFHEAKANGAPEVVVWGSGSPLREFLHVDDLADAVVFLMRRYSGAE 226 (306)
T ss_pred HhCCCEEEEEecceeCCCCCCCCCCCcccHHHHHHHHHHhhcCCCeEEEcCCCCeeeccccHHHHHHHHHHHHhccccCc
Confidence 88999999999999999743 1222222 11111111 13567888999999999999999998765567
Q ss_pred eEEEeCCCCCCHHHHHHHHHHHhcCCCCCcccCCCCCCCCCCCccCCCCCCCeEEEchhHHHhcCcccCCCCHHHHHHHH
Q 017914 273 VYNVVDDDPAPREEVFAYAWDLVEKKWPGLLKHRKPRENTESSNEKGSSRGEKRVSNVRMKKELGVRLWHPSYKSGLQSI 352 (364)
Q Consensus 273 ~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~e~l~~~ 352 (364)
.||+++++.+++.|+++.+.+.+|.+.. +... .. .........+|++|++ ++||+|++ +++|+|+++
T Consensus 227 ~~ni~~~~~~s~~e~~~~i~~~~~~~~~--~~~~-----~~----~~~~~~~~~~d~~k~~-~lg~~p~~-~~~~~l~~~ 293 (306)
T PLN02725 227 HVNVGSGDEVTIKELAELVKEVVGFEGE--LVWD-----TS----KPDGTPRKLMDSSKLR-SLGWDPKF-SLKDGLQET 293 (306)
T ss_pred ceEeCCCCcccHHHHHHHHHHHhCCCCc--eeec-----CC----CCCcccccccCHHHHH-HhCCCCCC-CHHHHHHHH
Confidence 8999999999999999999999987532 1110 00 0111223568999996 69999999 899999999
Q ss_pred HHHhcccCC
Q 017914 353 INQMDQPYQ 361 (364)
Q Consensus 353 ~~~~~~~~~ 361 (364)
++|+++|++
T Consensus 294 ~~~~~~~~~ 302 (306)
T PLN02725 294 YKWYLENYE 302 (306)
T ss_pred HHHHHhhhh
Confidence 999999875
|
|
| >PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-36 Score=273.36 Aligned_cols=281 Identities=14% Similarity=0.159 Sum_probs=200.3
Q ss_pred EEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCChh---h-H--Hhh-----ccCceeeEEEE
Q 017914 62 MLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANET---A-L--MIL-----TTLKNYTHLLV 129 (364)
Q Consensus 62 vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~---~-~--~~~-----~~~d~v~~~~~ 129 (364)
||||| +||||++|+++|+++|++++++.|+....... ..+..+|+.|. + . ..+ .++|+|+|+|+
T Consensus 2 ilVtGa~GfiG~~l~~~L~~~g~~~v~~~~~~~~~~~~----~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~d~Vih~A~ 77 (308)
T PRK11150 2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKF----VNLVDLDIADYMDKEDFLAQIMAGDDFGDIEAIFHEGA 77 (308)
T ss_pred EEEecCCcHHHHHHHHHHHhCCCceEEEecCCCcchHH----HhhhhhhhhhhhhHHHHHHHHhcccccCCccEEEECce
Confidence 79999 99999999999999999887777654322111 12234555542 2 1 222 26899999998
Q ss_pred ecCCCCCCC----ChhhhHHHHHHHHhhcCCccEEEEEccceeecCCCCccccCCCCCCCCChhHHHHHHHHHHHHHhhh
Q 017914 130 SIPPLEGTG----DPMLKHGELLRSTLMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANPTTELGRLRLSAEKGWLNLGR 205 (364)
Q Consensus 130 ~~~~~~~~~----~~~~~~~~~l~~a~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~~sK~~~E~~~~~~~~ 205 (364)
......... +.......|+++++++.++ +|||+||.++|+.....+.+|+.+..|.+.|+.+|..+|+++++++.
T Consensus 78 ~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~-~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~ 156 (308)
T PRK11150 78 CSSTTEWDGKYMMDNNYQYSKELLHYCLEREI-PFLYASSAATYGGRTDDFIEEREYEKPLNVYGYSKFLFDEYVRQILP 156 (308)
T ss_pred ecCCcCCChHHHHHHHHHHHHHHHHHHHHcCC-cEEEEcchHHhCcCCCCCCccCCCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 654322111 1123345688898888887 69999999999976555688888888999999999999999999987
Q ss_pred hcCCcEEEEEecceecCCCCh---H----HHHHHhcCcccc--cccccCCcccccccHHHHHHHHHHHccCCCCCceEEE
Q 017914 206 DLGISAQVFRLGGIYGPGRSS---V----DTIIKQLPLSEG--QKMRRARQYTSRIHVDDICQVLSASIDKPSAWNVYNV 276 (364)
Q Consensus 206 ~~~~~~~ilRp~~v~g~~~~~---~----~~~~~~~~~~~~--~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~~g~~~~i 276 (364)
..+++++++||+++||++... + ..+.....-... ...+.++..++|+|++|+|++++.+++... +++||+
T Consensus 157 ~~~~~~~~lR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~g~~~~~r~~i~v~D~a~a~~~~~~~~~-~~~yni 235 (308)
T PRK11150 157 EANSQICGFRYFNVYGPREGHKGSMASVAFHLNNQLNNGENPKLFEGSENFKRDFVYVGDVAAVNLWFWENGV-SGIFNC 235 (308)
T ss_pred HcCCCEEEEeeeeecCCCCCCCCccchhHHHHHHHHhcCCCCEEecCCCceeeeeeeHHHHHHHHHHHHhcCC-CCeEEc
Confidence 789999999999999987421 1 111111110111 112455678999999999999999988654 569999
Q ss_pred eCCCCCCHHHHHHHHHHHhcCCCCCcccCCCCCCCCCCCcc-CCCCCCCeEEEchhHHHhcCcccCCCCHHHHHHHHHHH
Q 017914 277 VDDDPAPREEVFAYAWDLVEKKWPGLLKHRKPRENTESSNE-KGSSRGEKRVSNVRMKKELGVRLWHPSYKSGLQSIINQ 355 (364)
Q Consensus 277 ~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~d~~k~~~~lG~~p~~~~~~e~l~~~~~~ 355 (364)
++++.+|+.|+++.+.+.+|.. + +.. ...+.. .........+|++|++ ++||+|++.+++|+|+++++|
T Consensus 236 ~~~~~~s~~el~~~i~~~~~~~-~--~~~------~~~~~~~~~~~~~~~~~d~~k~~-~~g~~p~~~~~~~gl~~~~~~ 305 (308)
T PRK11150 236 GTGRAESFQAVADAVLAYHKKG-E--IEY------IPFPDKLKGRYQAFTQADLTKLR-AAGYDKPFKTVAEGVAEYMAW 305 (308)
T ss_pred CCCCceeHHHHHHHHHHHhCCC-c--cee------ccCccccccccceecccCHHHHH-hcCCCCCCCCHHHHHHHHHHH
Confidence 9999999999999999999853 1 111 000100 0111233468999998 589998754899999999999
Q ss_pred hcc
Q 017914 356 MDQ 358 (364)
Q Consensus 356 ~~~ 358 (364)
+.+
T Consensus 306 ~~~ 308 (308)
T PRK11150 306 LNR 308 (308)
T ss_pred hhC
Confidence 753
|
|
| >PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.4e-36 Score=267.02 Aligned_cols=274 Identities=12% Similarity=0.166 Sum_probs=200.8
Q ss_pred CeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCChhhH--Hhhc--cCceeeEEEEecCCC
Q 017914 60 NRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETAL--MILT--TLKNYTHLLVSIPPL 134 (364)
Q Consensus 60 ~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~--~~~~--~~d~v~~~~~~~~~~ 134 (364)
|+||||| +||||++|+++|+++| +|++++|... .+.+|++|.+. ..++ ++|+|+|+++.....
T Consensus 1 m~iLVtG~~GfiGs~l~~~L~~~g-~V~~~~~~~~-----------~~~~Dl~d~~~~~~~~~~~~~D~Vih~Aa~~~~~ 68 (299)
T PRK09987 1 MNILLFGKTGQVGWELQRALAPLG-NLIALDVHST-----------DYCGDFSNPEGVAETVRKIRPDVIVNAAAHTAVD 68 (299)
T ss_pred CeEEEECCCCHHHHHHHHHhhccC-CEEEeccccc-----------cccCCCCCHHHHHHHHHhcCCCEEEECCccCCcc
Confidence 5899999 9999999999999999 7999888532 34589999764 5555 589999999876654
Q ss_pred CCCCChh------hhHHHHHHHHhhcCCccEEEEEccceeecCCCCccccCCCCCCCCChhHHHHHHHHHHHHHhhhhcC
Q 017914 135 EGTGDPM------LKHGELLRSTLMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANPTTELGRLRLSAEKGWLNLGRDLG 208 (364)
Q Consensus 135 ~~~~~~~------~~~~~~l~~a~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~ 208 (364)
....++. .....|++++++..++ +|||+||..||+.....|++|+++..|.+.|+.+|.++|++++.++.
T Consensus 69 ~~~~~~~~~~~~N~~~~~~l~~aa~~~g~-~~v~~Ss~~Vy~~~~~~p~~E~~~~~P~~~Yg~sK~~~E~~~~~~~~--- 144 (299)
T PRK09987 69 KAESEPEFAQLLNATSVEAIAKAANEVGA-WVVHYSTDYVFPGTGDIPWQETDATAPLNVYGETKLAGEKALQEHCA--- 144 (299)
T ss_pred hhhcCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEccceEECCCCCCCcCCCCCCCCCCHHHHHHHHHHHHHHHhCC---
Confidence 3333332 2345688888888875 79999999999887777899999999999999999999999987643
Q ss_pred CcEEEEEecceecCCC-ChHHHHHHhcCccc-cccccc--CCcccccccHHHHHHHHHHHccCCCCCceEEEeCCCCCCH
Q 017914 209 ISAQVFRLGGIYGPGR-SSVDTIIKQLPLSE-GQKMRR--ARQYTSRIHVDDICQVLSASIDKPSAWNVYNVVDDDPAPR 284 (364)
Q Consensus 209 ~~~~ilRp~~v~g~~~-~~~~~~~~~~~~~~-~~~~~~--~~~~~~~i~v~Dva~~~~~~l~~~~~g~~~~i~~~~~~s~ 284 (364)
+++++|++++||+++ +++..++....-.. ....++ +.+.+.+.+++|++.++..++.....+++||+++++.+|+
T Consensus 145 -~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~v~~d~~g~~~~~~~~~d~~~~~~~~~~~~~~~~giyni~~~~~~s~ 223 (299)
T PRK09987 145 -KHLIFRTSWVYAGKGNNFAKTMLRLAKEREELSVINDQFGAPTGAELLADCTAHAIRVALNKPEVAGLYHLVASGTTTW 223 (299)
T ss_pred -CEEEEecceecCCCCCCHHHHHHHHHhcCCCeEEeCCCcCCCCCHHHHHHHHHHHHHHhhccCCCCCeEEeeCCCCccH
Confidence 579999999999864 44555544311111 111222 4455566678888888888877654456999999999999
Q ss_pred HHHHHHHHHHhc---CCCC-CcccCCCCCCCCCCCccCCCCCCCeEEEchhHHHhcCcccCCCCHHHHHHHHHHHh
Q 017914 285 EEVFAYAWDLVE---KKWP-GLLKHRKPRENTESSNEKGSSRGEKRVSNVRMKKELGVRLWHPSYKSGLQSIINQM 356 (364)
Q Consensus 285 ~el~~~i~~~~g---~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~e~l~~~~~~~ 356 (364)
.|+++.+.+..+ .+.+ ..+... .....+ ....++.+..+|++|+++.|||+|. +|+|+|+++++.+
T Consensus 224 ~e~~~~i~~~~~~~g~~~~~~~i~~~---~~~~~~-~~~~rp~~~~ld~~k~~~~lg~~~~--~~~~~l~~~~~~~ 293 (299)
T PRK09987 224 HDYAALVFEEARKAGITLALNKLNAV---PTSAYP-TPARRPHNSRLNTEKFQQNFALVLP--DWQVGVKRMLTEL 293 (299)
T ss_pred HHHHHHHHHHHHhcCCCcCcCeeeec---chhhcC-CCCCCCCcccCCHHHHHHHhCCCCc--cHHHHHHHHHHHH
Confidence 999999988654 2311 001110 000111 1234566778999999999999984 7999999999865
|
|
| >TIGR03466 HpnA hopanoid-associated sugar epimerase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-35 Score=268.81 Aligned_cols=294 Identities=15% Similarity=0.174 Sum_probs=214.5
Q ss_pred CeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCChhhH--HhhccCceeeEEEEecCCCCC
Q 017914 60 NRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETAL--MILTTLKNYTHLLVSIPPLEG 136 (364)
Q Consensus 60 ~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~--~~~~~~d~v~~~~~~~~~~~~ 136 (364)
|+||||| +|+||+++++.|+++|++|++++|++.....+...+++++.+|++|.+. ..++++|+|+|+++.......
T Consensus 1 ~~vlItG~~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~d~vi~~a~~~~~~~~ 80 (328)
T TIGR03466 1 MKVLVTGATGFVGSAVVRLLLEQGEEVRVLVRPTSDRRNLEGLDVEIVEGDLRDPASLRKAVAGCRALFHVAADYRLWAP 80 (328)
T ss_pred CeEEEECCccchhHHHHHHHHHCCCEEEEEEecCccccccccCCceEEEeeCCCHHHHHHHHhCCCEEEEeceecccCCC
Confidence 5899999 9999999999999999999999998766544444578899999999764 667889999999975432211
Q ss_pred C----CChhhhHHHHHHHHhhcCCccEEEEEccceeecC-CCCccccCCCCCCC---CChhHHHHHHHHHHHHHhhhhcC
Q 017914 137 T----GDPMLKHGELLRSTLMNGHLQWLGYLSSTGVYGH-SGGAWVDEDYPANP---TTELGRLRLSAEKGWLNLGRDLG 208 (364)
Q Consensus 137 ~----~~~~~~~~~~l~~a~~~~~~~r~v~~Ss~~vy~~-~~~~~~~E~~~~~~---~~~Y~~sK~~~E~~~~~~~~~~~ 208 (364)
. .+.......++++++...+++++|++||..+|+. ..+.+++|+.+..+ .+.|+.+|.++|++++++..+.+
T Consensus 81 ~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~ 160 (328)
T TIGR03466 81 DPEEMYAANVEGTRNLLRAALEAGVERVVYTSSVATLGVRGDGTPADETTPSSLDDMIGHYKRSKFLAEQAALEMAAEKG 160 (328)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEechhhcCcCCCCCCcCccCCCCcccccChHHHHHHHHHHHHHHHHHhcC
Confidence 1 0112234467788888888999999999999985 34457888877655 46899999999999999988789
Q ss_pred CcEEEEEecceecCCCCh---HHHHHHhcCcccccccccCCcccccccHHHHHHHHHHHccCCCCCceEEEeCCCCCCHH
Q 017914 209 ISAQVFRLGGIYGPGRSS---VDTIIKQLPLSEGQKMRRARQYTSRIHVDDICQVLSASIDKPSAWNVYNVVDDDPAPRE 285 (364)
Q Consensus 209 ~~~~ilRp~~v~g~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~~g~~~~i~~~~~~s~~ 285 (364)
++++++||+.+||++... ...++......... .......+|+|++|+|++++.++++...|+.|+++ ++.++++
T Consensus 161 ~~~~ilR~~~~~G~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~i~v~D~a~a~~~~~~~~~~~~~~~~~-~~~~s~~ 237 (328)
T TIGR03466 161 LPVVIVNPSTPIGPRDIKPTPTGRIIVDFLNGKMP--AYVDTGLNLVHVDDVAEGHLLALERGRIGERYILG-GENLTLK 237 (328)
T ss_pred CCEEEEeCCccCCCCCCCCCcHHHHHHHHHcCCCc--eeeCCCcceEEHHHHHHHHHHHHhCCCCCceEEec-CCCcCHH
Confidence 999999999999987531 11222110000000 11123468999999999999999887778888875 6889999
Q ss_pred HHHHHHHHHhcCCCCCcccCCCCC-------------CCCCCCcc----CCCCCCCeEEEchhHHHhcCcccCCCCHHHH
Q 017914 286 EVFAYAWDLVEKKWPGLLKHRKPR-------------ENTESSNE----KGSSRGEKRVSNVRMKKELGVRLWHPSYKSG 348 (364)
Q Consensus 286 el~~~i~~~~g~~~~~~~~~~~~~-------------~~~~~~~~----~~~~~~~~~~d~~k~~~~lG~~p~~~~~~e~ 348 (364)
|+++.+.+.+|.+.+. ...+... .....+.. .........+|++|+++.|||+|+ +++|+
T Consensus 238 e~~~~i~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lg~~p~--~~~~~ 314 (328)
T TIGR03466 238 QILDKLAEITGRPAPR-VKLPRWLLLPVAWGAEALARLTGKEPRVTVDGVRMAKKKMFFSSAKAVRELGYRQR--PAREA 314 (328)
T ss_pred HHHHHHHHHhCCCCCC-CcCCHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHhccCCCChHHHHHHcCCCCc--CHHHH
Confidence 9999999999976332 1111000 00000000 001123556899999999999994 79999
Q ss_pred HHHHHHHhccc
Q 017914 349 LQSIINQMDQP 359 (364)
Q Consensus 349 l~~~~~~~~~~ 359 (364)
|.++++|++++
T Consensus 315 i~~~~~~~~~~ 325 (328)
T TIGR03466 315 LRDAVEWFRAN 325 (328)
T ss_pred HHHHHHHHHHh
Confidence 99999999864
|
The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene. |
| >TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-35 Score=264.04 Aligned_cols=283 Identities=11% Similarity=0.097 Sum_probs=203.3
Q ss_pred EEEEc-CChhhHHHHHHHHhCCC-EEEEEEeCchhhhhhhhCCceEEEccCChhhH-Hhh-----ccCceeeEEEEecCC
Q 017914 62 MLILG-MGFVGRIFAEKIKNQGW-VVSGTCTNVMKKKELEQSGFDVHLFNANETAL-MIL-----TTLKNYTHLLVSIPP 133 (364)
Q Consensus 62 vlVtG-tG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~-~~~-----~~~d~v~~~~~~~~~ 133 (364)
||||| |||||+++++.|.++|+ +|++++|..... .+.......+..|+++.+. ..+ .++|+|+|+++....
T Consensus 1 ilItGatG~iG~~l~~~L~~~g~~~v~~~~~~~~~~-~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~D~vvh~A~~~~~ 79 (314)
T TIGR02197 1 IIVTGGAGFIGSNLVKALNERGITDILVVDNLRDGH-KFLNLADLVIADYIDKEDFLDRLEKGAFGKIEAIFHQGACSDT 79 (314)
T ss_pred CEEeCCcchhhHHHHHHHHHcCCceEEEEecCCCch-hhhhhhheeeeccCcchhHHHHHHhhccCCCCEEEECccccCc
Confidence 69999 99999999999999997 788887754322 1211122456678887664 332 479999999986432
Q ss_pred CCCCC----ChhhhHHHHHHHHhhcCCccEEEEEccceeecCCCCccccCCCC-CCCCChhHHHHHHHHHHHHHhhh--h
Q 017914 134 LEGTG----DPMLKHGELLRSTLMNGHLQWLGYLSSTGVYGHSGGAWVDEDYP-ANPTTELGRLRLSAEKGWLNLGR--D 206 (364)
Q Consensus 134 ~~~~~----~~~~~~~~~l~~a~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~-~~~~~~Y~~sK~~~E~~~~~~~~--~ 206 (364)
..... +.......++++++.+.++ +|||+||.++|+.... +.+|+.+ ..|.+.|+.+|..+|.+++++.. .
T Consensus 80 ~~~~~~~~~~~n~~~~~~ll~~~~~~~~-~~v~~SS~~vy~~~~~-~~~e~~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~ 157 (314)
T TIGR02197 80 TETDGEYMMENNYQYSKRLLDWCAEKGI-PFIYASSAATYGDGEA-GFREGRELERPLNVYGYSKFLFDQYVRRRVLPEA 157 (314)
T ss_pred cccchHHHHHHHHHHHHHHHHHHHHhCC-cEEEEccHHhcCCCCC-CcccccCcCCCCCHHHHHHHHHHHHHHHHhHhhc
Confidence 21111 1122445678888887776 7999999999987644 4555554 45888999999999999987542 3
Q ss_pred cCCcEEEEEecceecCCCC-------hHHHHHH----hcCccc---ccccccCCcccccccHHHHHHHHHHHccCCCCCc
Q 017914 207 LGISAQVFRLGGIYGPGRS-------SVDTIIK----QLPLSE---GQKMRRARQYTSRIHVDDICQVLSASIDKPSAWN 272 (364)
Q Consensus 207 ~~~~~~ilRp~~v~g~~~~-------~~~~~~~----~~~~~~---~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~~g~ 272 (364)
.+++++++||+.+||++.. .+..+.. ...+.. ....+.|++.++|+|++|++++++.++.+ ..++
T Consensus 158 ~~~~~~~lR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~D~a~~i~~~~~~-~~~~ 236 (314)
T TIGR02197 158 LSAQVVGLRYFNVYGPREYHKGKMASVAFHLFNQIKAGGNVKLFKSSEGFKDGEQLRDFVYVKDVVDVNLWLLEN-GVSG 236 (314)
T ss_pred cCCceEEEEEeeccCCCCCCCCCcccHHHHHHHHHhcCCCeEEecCccccCCCCceeeeEEHHHHHHHHHHHHhc-ccCc
Confidence 3679999999999999742 1222222 222211 12335688889999999999999999988 4567
Q ss_pred eEEEeCCCCCCHHHHHHHHHHHhcCCCCCcccCCCCCCCCCCCcc-CCCCCCCeEEEchhHHHhcCcccCCCCHHHHHHH
Q 017914 273 VYNVVDDDPAPREEVFAYAWDLVEKKWPGLLKHRKPRENTESSNE-KGSSRGEKRVSNVRMKKELGVRLWHPSYKSGLQS 351 (364)
Q Consensus 273 ~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~d~~k~~~~lG~~p~~~~~~e~l~~ 351 (364)
+||+++++++|++|+++.+.+.+|.+.. ....+ .+.. .........+|++|+++.+||+|++ +++|++++
T Consensus 237 ~yni~~~~~~s~~e~~~~i~~~~g~~~~-~~~~~-------~~~~~~~~~~~~~~~~~~k~~~~l~~~p~~-~l~~~l~~ 307 (314)
T TIGR02197 237 IFNLGTGRARSFNDLADAVFKALGKDEK-IEYIP-------MPEALRGKYQYFTQADITKLRAAGYYGPFT-TLEEGVKD 307 (314)
T ss_pred eEEcCCCCCccHHHHHHHHHHHhCCCCc-ceecc-------CccccccccccccccchHHHHHhcCCCCcc-cHHHHHHH
Confidence 9999999999999999999999997621 11110 1110 0112233568999999999999998 89999999
Q ss_pred HHHHhc
Q 017914 352 IINQMD 357 (364)
Q Consensus 352 ~~~~~~ 357 (364)
+++|++
T Consensus 308 ~~~~~~ 313 (314)
T TIGR02197 308 YVQWLL 313 (314)
T ss_pred HHHHHh
Confidence 999985
|
This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370). |
| >TIGR01179 galE UDP-glucose-4-epimerase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-34 Score=263.90 Aligned_cols=288 Identities=17% Similarity=0.182 Sum_probs=214.1
Q ss_pred eEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchh-hhhhhh----CCceEEEccCChhhH--Hhhc--cCceeeEEEEe
Q 017914 61 RMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMK-KKELEQ----SGFDVHLFNANETAL--MILT--TLKNYTHLLVS 130 (364)
Q Consensus 61 ~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~-~~~l~~----~~~~~~~~D~~~~~~--~~~~--~~d~v~~~~~~ 130 (364)
+||||| +|+||+++++.|+++|++|++++|.... ...+.. .+++++.+|+++.+. ..+. .+|.|+|+++.
T Consensus 1 kvlV~GatG~iG~~l~~~l~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vv~~ag~ 80 (328)
T TIGR01179 1 KILVTGGAGYIGSHTVRQLLESGHEVVVLDNLSNGSPEALKRGERITRVTFVEGDLRDRELLDRLFEEHKIDAVIHFAGL 80 (328)
T ss_pred CEEEeCCCCHHHHHHHHHHHhCCCeEEEEeCCCccchhhhhhhccccceEEEECCCCCHHHHHHHHHhCCCcEEEECccc
Confidence 589998 9999999999999999999988764322 111111 146788999999764 4443 68999999986
Q ss_pred cCCCCCCCC------hhhhHHHHHHHHhhcCCccEEEEEccceeecCCCCccccCCCCCCCCChhHHHHHHHHHHHHHhh
Q 017914 131 IPPLEGTGD------PMLKHGELLRSTLMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANPTTELGRLRLSAEKGWLNLG 204 (364)
Q Consensus 131 ~~~~~~~~~------~~~~~~~~l~~a~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~~sK~~~E~~~~~~~ 204 (364)
........+ .......++++++...+++++|++||..+|+.....+++|+.+..|.+.|+.+|..+|.+++.++
T Consensus 81 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~ss~~~~g~~~~~~~~e~~~~~~~~~y~~sK~~~e~~~~~~~ 160 (328)
T TIGR01179 81 IAVGESVQDPLKYYRNNVVNTLNLLEAMQQTGVKKFIFSSSAAVYGEPSSIPISEDSPLGPINPYGRSKLMSERILRDLS 160 (328)
T ss_pred cCcchhhcCchhhhhhhHHHHHHHHHHHHhcCCCEEEEecchhhcCCCCCCCccccCCCCCCCchHHHHHHHHHHHHHHH
Confidence 533222111 12334467777787888899999999999987766678999998899999999999999999987
Q ss_pred hh-cCCcEEEEEecceecCCCC------------hHHHHHHh-----cCccc-c--cccccCCcccccccHHHHHHHHHH
Q 017914 205 RD-LGISAQVFRLGGIYGPGRS------------SVDTIIKQ-----LPLSE-G--QKMRRARQYTSRIHVDDICQVLSA 263 (364)
Q Consensus 205 ~~-~~~~~~ilRp~~v~g~~~~------------~~~~~~~~-----~~~~~-~--~~~~~~~~~~~~i~v~Dva~~~~~ 263 (364)
++ .+++++++||+.+||+... .+..+... ..+.. + .....+.+.++|||++|+|++++.
T Consensus 161 ~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~~~D~a~~~~~ 240 (328)
T TIGR01179 161 KADPGLSYVILRYFNVAGADPEGTIGEDPPGITHLIPYACQVAVGKRDKLTIFGTDYPTPDGTCVRDYIHVMDLADAHLA 240 (328)
T ss_pred HhccCCCEEEEecCcccCCCCCCccccCCcccchHHHHHHHHHHhCCCCeEEeCCcccCCCCceEEeeeeHHHHHHHHHH
Confidence 66 7999999999999998521 12222211 11111 1 122456778899999999999999
Q ss_pred HccCC---CCCceEEEeCCCCCCHHHHHHHHHHHhcCCCCCcccCCCCCCCCCCCccCCCCCCCeEEEchhHHHhcCccc
Q 017914 264 SIDKP---SAWNVYNVVDDDPAPREEVFAYAWDLVEKKWPGLLKHRKPRENTESSNEKGSSRGEKRVSNVRMKKELGVRL 340 (364)
Q Consensus 264 ~l~~~---~~g~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p 340 (364)
++... ..+++||+++++++|++|+++.+.+.+|.+.+... . .. .........+|++|++++|||+|
T Consensus 241 ~~~~~~~~~~~~~~n~~~~~~~s~~ei~~~~~~~~g~~~~~~~-~------~~----~~~~~~~~~~~~~~~~~~lg~~p 309 (328)
T TIGR01179 241 ALEYLLNGGESHVYNLGYGQGFSVLEVIEAFKKVSGVDFPVEL-A------PR----RPGDPASLVADASKIRRELGWQP 309 (328)
T ss_pred HHhhhhcCCCcceEEcCCCCcccHHHHHHHHHHHhCCCcceEe-C------CC----CCccccchhcchHHHHHHhCCCC
Confidence 98753 34689999999999999999999999998743211 1 00 01112245679999999999999
Q ss_pred CCCCHHHHHHHHHHHhccc
Q 017914 341 WHPSYKSGLQSIINQMDQP 359 (364)
Q Consensus 341 ~~~~~~e~l~~~~~~~~~~ 359 (364)
++++++++|+++++|+++|
T Consensus 310 ~~~~l~~~~~~~~~~~~~~ 328 (328)
T TIGR01179 310 KYTDLEIIIKTAWRWESRN 328 (328)
T ss_pred CcchHHHHHHHHHHHHhcC
Confidence 9955999999999999875
|
This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately. |
| >TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-34 Score=255.57 Aligned_cols=271 Identities=18% Similarity=0.235 Sum_probs=198.7
Q ss_pred eEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCChhhH--Hhhcc--CceeeEEEEecCCCC
Q 017914 61 RMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETAL--MILTT--LKNYTHLLVSIPPLE 135 (364)
Q Consensus 61 ~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~--~~~~~--~d~v~~~~~~~~~~~ 135 (364)
+||||| |||||++++++|+++|++|++++|+ .+|+.+.+. ..+.+ +|.|+|+++......
T Consensus 1 kilv~G~tG~iG~~l~~~l~~~g~~v~~~~r~---------------~~d~~~~~~~~~~~~~~~~d~vi~~a~~~~~~~ 65 (287)
T TIGR01214 1 RILITGANGQLGRELVQQLSPEGRVVVALTSS---------------QLDLTDPEALERLLRAIRPDAVVNTAAYTDVDG 65 (287)
T ss_pred CEEEEcCCCHHHHHHHHHHHhcCCEEEEeCCc---------------ccCCCCHHHHHHHHHhCCCCEEEECCccccccc
Confidence 589999 9999999999999999999999985 368888663 55554 499999997654322
Q ss_pred CCCChh------hhHHHHHHHHhhcCCccEEEEEccceeecCCCCccccCCCCCCCCChhHHHHHHHHHHHHHhhhhcCC
Q 017914 136 GTGDPM------LKHGELLRSTLMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANPTTELGRLRLSAEKGWLNLGRDLGI 209 (364)
Q Consensus 136 ~~~~~~------~~~~~~l~~a~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~ 209 (364)
....+. .....++++++++.+. +||++||..+|+.....+++|+++..|.+.|+.+|..+|++++.+ ++
T Consensus 66 ~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~~~K~~~E~~~~~~----~~ 140 (287)
T TIGR01214 66 AESDPEKAFAVNALAPQNLARAAARHGA-RLVHISTDYVFDGEGKRPYREDDATNPLNVYGQSKLAGEQAIRAA----GP 140 (287)
T ss_pred cccCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEeeeeeecCCCCCCCCCCCCCCCcchhhHHHHHHHHHHHHh----CC
Confidence 111111 2345677778877665 899999999998766778999999889999999999999999764 67
Q ss_pred cEEEEEecceecCCC--ChHHHHHHhcCcccccccccCCcccccccHHHHHHHHHHHccCC-CCCceEEEeCCCCCCHHH
Q 017914 210 SAQVFRLGGIYGPGR--SSVDTIIKQLPLSEGQKMRRARQYTSRIHVDDICQVLSASIDKP-SAWNVYNVVDDDPAPREE 286 (364)
Q Consensus 210 ~~~ilRp~~v~g~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~-~~g~~~~i~~~~~~s~~e 286 (364)
+++++||+.+||++. .++..++....-. ......+++.++++|++|+|++++.+++++ ..+++||+++++.+++.|
T Consensus 141 ~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~~~~~~ni~~~~~~s~~e 219 (287)
T TIGR01214 141 NALIVRTSWLYGGGGGRNFVRTMLRLAGRG-EELRVVDDQIGSPTYAKDLARVIAALLQRLARARGVYHLANSGQCSWYE 219 (287)
T ss_pred CeEEEEeeecccCCCCCCHHHHHHHHhhcC-CCceEecCCCcCCcCHHHHHHHHHHHHhhccCCCCeEEEECCCCcCHHH
Confidence 899999999999974 4444443321111 111112346789999999999999999886 457899999999999999
Q ss_pred HHHHHHHHhcCCCCCcccCCCCCCCCC-CCccCCCCCCCeEEEchhHHHhcCcccCCCCHHHHHHHHHHH
Q 017914 287 VFAYAWDLVEKKWPGLLKHRKPRENTE-SSNEKGSSRGEKRVSNVRMKKELGVRLWHPSYKSGLQSIINQ 355 (364)
Q Consensus 287 l~~~i~~~~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~e~l~~~~~~ 355 (364)
+++.+.+.+|.+.. .+..+....... .............+|++|+++.|||++ + +++|+|++++++
T Consensus 220 ~~~~i~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~lg~~~-~-~~~~~l~~~~~~ 286 (287)
T TIGR01214 220 FAQAIFEEAGADGL-LLHPQEVKPISSKEYPRPARRPAYSVLDNTKLVKTLGTPL-P-HWREALRAYLQE 286 (287)
T ss_pred HHHHHHHHhCcccc-cccCceeEeecHHHcCCCCCCCCccccchHHHHHHcCCCC-c-cHHHHHHHHHhh
Confidence 99999999997631 111100000000 000111223456799999999999954 4 899999998864
|
This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc. |
| >PLN02686 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-33 Score=258.82 Aligned_cols=270 Identities=14% Similarity=0.141 Sum_probs=198.1
Q ss_pred CCCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhh-----------CCceEEEccCChhhH--HhhccC
Q 017914 56 WQSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQ-----------SGFDVHLFNANETAL--MILTTL 121 (364)
Q Consensus 56 ~~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~-----------~~~~~~~~D~~~~~~--~~~~~~ 121 (364)
...+|+||||| +||||++++++|+++|++|++++|+.+....+.. .++.++.+|++|.+. ..++++
T Consensus 50 ~~~~k~VLVTGatGfIG~~lv~~L~~~G~~V~~~~r~~~~~~~l~~l~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~i~~~ 129 (367)
T PLN02686 50 DAEARLVCVTGGVSFLGLAIVDRLLRHGYSVRIAVDTQEDKEKLREMEMFGEMGRSNDGIWTVMANLTEPESLHEAFDGC 129 (367)
T ss_pred CCCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhhccccccCCceEEEEcCCCCHHHHHHHHHhc
Confidence 46678999999 9999999999999999999999987654433221 247889999999774 677889
Q ss_pred ceeeEEEEecCCCC------CCCChhhhHHHHHHHHhhcC-CccEEEEEccc--eeecCC--CC--ccccCCC------C
Q 017914 122 KNYTHLLVSIPPLE------GTGDPMLKHGELLRSTLMNG-HLQWLGYLSST--GVYGHS--GG--AWVDEDY------P 182 (364)
Q Consensus 122 d~v~~~~~~~~~~~------~~~~~~~~~~~~l~~a~~~~-~~~r~v~~Ss~--~vy~~~--~~--~~~~E~~------~ 182 (364)
|.|+|+++...... ...+.......|++++++.. +++||||+||. .+|+.. .. .+++|+. +
T Consensus 130 d~V~hlA~~~~~~~~~~~~~~~~~~nv~gt~~llea~~~~~~v~r~V~~SS~~~~vyg~~~~~~~~~~i~E~~~~~~~~~ 209 (367)
T PLN02686 130 AGVFHTSAFVDPAGLSGYTKSMAELEAKASENVIEACVRTESVRKCVFTSSLLACVWRQNYPHDLPPVIDEESWSDESFC 209 (367)
T ss_pred cEEEecCeeecccccccccchhhhhhHHHHHHHHHHHHhcCCccEEEEeccHHHhcccccCCCCCCcccCCCCCCChhhc
Confidence 99999998754322 11123345567899998865 79999999996 477642 11 2356653 3
Q ss_pred CCCCChhHHHHHHHHHHHHHhhhhcCCcEEEEEecceecCCCCh-----HHHHHHhcCcccccccccCCcccccccHHHH
Q 017914 183 ANPTTELGRLRLSAEKGWLNLGRDLGISAQVFRLGGIYGPGRSS-----VDTIIKQLPLSEGQKMRRARQYTSRIHVDDI 257 (364)
Q Consensus 183 ~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilRp~~v~g~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dv 257 (364)
..|.++|+.+|..+|++++.+++..+++++++||+++||++... +..++.+. ....+++ .++|+|++|+
T Consensus 210 ~~p~~~Y~~sK~~~E~~~~~~~~~~gl~~v~lRp~~vyGp~~~~~~~~~~~~~~~g~----~~~~g~g--~~~~v~V~Dv 283 (367)
T PLN02686 210 RDNKLWYALGKLKAEKAAWRAARGKGLKLATICPALVTGPGFFRRNSTATIAYLKGA----QEMLADG--LLATADVERL 283 (367)
T ss_pred ccccchHHHHHHHHHHHHHHHHHhcCceEEEEcCCceECCCCCCCCChhHHHHhcCC----CccCCCC--CcCeEEHHHH
Confidence 34667899999999999999988889999999999999997421 11122111 1122333 3579999999
Q ss_pred HHHHHHHccCC---CCCceEEEeCCCCCCHHHHHHHHHHHhcCCCCCcccCCCCCCCCCCCccCCCCCCCeEEEchhHHH
Q 017914 258 CQVLSASIDKP---SAWNVYNVVDDDPAPREEVFAYAWDLVEKKWPGLLKHRKPRENTESSNEKGSSRGEKRVSNVRMKK 334 (364)
Q Consensus 258 a~~~~~~l~~~---~~g~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~ 334 (364)
|++++.+++.. ..+++| +++++.++++|+++.+.+.+|.+.+.. . .+.........+.+|++|+++
T Consensus 284 a~A~~~al~~~~~~~~~~~y-i~~g~~~s~~e~~~~i~~~~g~~~~~~--~--------~~~~~~~d~~~~~~d~~kl~~ 352 (367)
T PLN02686 284 AEAHVCVYEAMGNKTAFGRY-ICFDHVVSREDEAEELARQIGLPINKI--A--------GNSSSDDTPARFELSNKKLSR 352 (367)
T ss_pred HHHHHHHHhccCCCCCCCcE-EEeCCCccHHHHHHHHHHHcCCCCCcC--C--------CchhhcCCcccccccHHHHHH
Confidence 99999999852 346688 888899999999999999999764321 1 000002234557789999999
Q ss_pred hcCcccCC
Q 017914 335 ELGVRLWH 342 (364)
Q Consensus 335 ~lG~~p~~ 342 (364)
+|||+|+-
T Consensus 353 ~l~~~~~~ 360 (367)
T PLN02686 353 LMSRTRRC 360 (367)
T ss_pred HHHHhhhc
Confidence 99999875
|
|
| >TIGR01777 yfcH conserved hypothetical protein TIGR01777 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.6e-34 Score=253.72 Aligned_cols=280 Identities=18% Similarity=0.195 Sum_probs=198.3
Q ss_pred EEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCChhh-HHhhccCceeeEEEEecCCCCCCC-
Q 017914 62 MLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETA-LMILTTLKNYTHLLVSIPPLEGTG- 138 (364)
Q Consensus 62 vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~-~~~~~~~d~v~~~~~~~~~~~~~~- 138 (364)
||||| +||||+++++.|+++|++|++++|+......+....+ .|+.... ...+.++|.|+|+++.......+.
T Consensus 1 vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~~~~~~~~D~Vvh~a~~~~~~~~~~~ 76 (292)
T TIGR01777 1 ILITGGTGFIGRALTQRLTKDGHEVTILTRSPPAGANTKWEGY----KPWAPLAESEALEGADAVINLAGEPIADKRWTE 76 (292)
T ss_pred CEEEcccchhhHHHHHHHHHcCCEEEEEeCCCCCCCcccceee----ecccccchhhhcCCCCEEEECCCCCcccccCCH
Confidence 68999 9999999999999999999999998765443221111 1222212 256688999999998643221111
Q ss_pred -------ChhhhHHHHHHHHhhcCCcc--EEEEEccceeecCCCCccccCCCCCCCCChhHHHHHHHHHHHHHhhhhcCC
Q 017914 139 -------DPMLKHGELLRSTLMNGHLQ--WLGYLSSTGVYGHSGGAWVDEDYPANPTTELGRLRLSAEKGWLNLGRDLGI 209 (364)
Q Consensus 139 -------~~~~~~~~~l~~a~~~~~~~--r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~ 209 (364)
+.......++++++++.+++ +||++|+.++|+.....+++|+.+..+.+.|+..+...|..+..+ ++.++
T Consensus 77 ~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~i~~S~~~~yg~~~~~~~~E~~~~~~~~~~~~~~~~~e~~~~~~-~~~~~ 155 (292)
T TIGR01777 77 ERKQEIRDSRIDTTRALVEAIAAAEQKPKVFISASAVGYYGTSEDRVFTEEDSPAGDDFLAELCRDWEEAAQAA-EDLGT 155 (292)
T ss_pred HHHHHHHhcccHHHHHHHHHHHhcCCCceEEEEeeeEEEeCCCCCCCcCcccCCCCCChHHHHHHHHHHHhhhc-hhcCC
Confidence 11234467899999888764 577777788999776677889886666667777777778776544 34689
Q ss_pred cEEEEEecceecCCCChHHHHHHhcCcccccccccCCcccccccHHHHHHHHHHHccCCCCCceEEEeCCCCCCHHHHHH
Q 017914 210 SAQVFRLGGIYGPGRSSVDTIIKQLPLSEGQKMRRARQYTSRIHVDDICQVLSASIDKPSAWNVYNVVDDDPAPREEVFA 289 (364)
Q Consensus 210 ~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~~g~~~~i~~~~~~s~~el~~ 289 (364)
+++++||+.+||++++....+...........++.+++.++|||++|+|+++..+++++..+++||+++++.+|++|+++
T Consensus 156 ~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~i~v~Dva~~i~~~l~~~~~~g~~~~~~~~~~s~~di~~ 235 (292)
T TIGR01777 156 RVVLLRTGIVLGPKGGALAKMLPPFRLGLGGPLGSGRQWFSWIHIEDLVQLILFALENASISGPVNATAPEPVRNKEFAK 235 (292)
T ss_pred ceEEEeeeeEECCCcchhHHHHHHHhcCcccccCCCCcccccEeHHHHHHHHHHHhcCcccCCceEecCCCccCHHHHHH
Confidence 99999999999998765554443322222234567889999999999999999999987666799999999999999999
Q ss_pred HHHHHhcCCCCCcccCCCCCCCCCCCccCCCCCCCeEEEchhHHHhcCcccCCCCHHHHH
Q 017914 290 YAWDLVEKKWPGLLKHRKPRENTESSNEKGSSRGEKRVSNVRMKKELGVRLWHPSYKSGL 349 (364)
Q Consensus 290 ~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~e~l 349 (364)
.+.+.+|.+.+..++..... ..............+++++|++ ++||+|+|++++|++
T Consensus 236 ~i~~~~g~~~~~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~ 292 (292)
T TIGR01777 236 ALARALHRPAFFPVPAFVLR--ALLGEMADLLLKGQRVLPEKLL-EAGFQFQYPDLDEAL 292 (292)
T ss_pred HHHHHhCCCCcCcCCHHHHH--HHhchhhHHHhCCcccccHHHH-hcCCeeeCcChhhcC
Confidence 99999997632111110000 0000111123346778999997 699999998888864
|
This model represents a clade of proteins of unknown function including the E. coli yfcH protein. |
| >COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-33 Score=235.49 Aligned_cols=283 Identities=19% Similarity=0.241 Sum_probs=211.9
Q ss_pred EEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCChhhHHhhc-cCceeeEEEEecCCCCCCCC
Q 017914 62 MLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETALMILT-TLKNYTHLLVSIPPLEGTGD 139 (364)
Q Consensus 62 vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~~~~~-~~d~v~~~~~~~~~~~~~~~ 139 (364)
|+||| |||||++|+..|.+.||+|++++|++.+........+. ..|-. . .... ++|+|+|+|+..-....|..
T Consensus 1 IliTGgTGlIG~~L~~~L~~~gh~v~iltR~~~~~~~~~~~~v~--~~~~~-~--~~~~~~~DavINLAG~~I~~rrWt~ 75 (297)
T COG1090 1 ILITGGTGLIGRALTARLRKGGHQVTILTRRPPKASQNLHPNVT--LWEGL-A--DALTLGIDAVINLAGEPIAERRWTE 75 (297)
T ss_pred CeEeccccchhHHHHHHHHhCCCeEEEEEcCCcchhhhcCcccc--ccchh-h--hcccCCCCEEEECCCCccccccCCH
Confidence 68998 99999999999999999999999998776543222222 11111 1 2223 79999999976433332322
Q ss_pred hhh--------hHHHHHHHHhh--cCCccEEEEEccceeecCCCCccccCCCCCCCCChhHHHHHHHHHHHHHhhhhcCC
Q 017914 140 PML--------KHGELLRSTLM--NGHLQWLGYLSSTGVYGHSGGAWVDEDYPANPTTELGRLRLSAEKGWLNLGRDLGI 209 (364)
Q Consensus 140 ~~~--------~~~~~l~~a~~--~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~ 209 (364)
... ..++.+.++.. +.+.+.+|..|.++.||......++|+++. ..+.-+..-...|+....+ +..|.
T Consensus 76 ~~K~~i~~SRi~~T~~L~e~I~~~~~~P~~~isaSAvGyYG~~~~~~~tE~~~~-g~~Fla~lc~~WE~~a~~a-~~~gt 153 (297)
T COG1090 76 KQKEEIRQSRINTTEKLVELIAASETKPKVLISASAVGYYGHSGDRVVTEESPP-GDDFLAQLCQDWEEEALQA-QQLGT 153 (297)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHhccCCCcEEEecceEEEecCCCceeeecCCCC-CCChHHHHHHHHHHHHhhh-hhcCc
Confidence 111 22344555544 566788999999999999999999999655 3445556666667766554 35589
Q ss_pred cEEEEEecceecCCCChHHHHHHhcCcccccccccCCcccccccHHHHHHHHHHHccCCCCCceEEEeCCCCCCHHHHHH
Q 017914 210 SAQVFRLGGIYGPGRSSVDTIIKQLPLSEGQKMRRARQYTSRIHVDDICQVLSASIDKPSAWNVYNVVDDDPAPREEVFA 289 (364)
Q Consensus 210 ~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~~g~~~~i~~~~~~s~~el~~ 289 (364)
+++++|.|.|.++..+.+..++....+..++.+|+|.|+++|||++|+++++..++++....+.||+++|.|++.+|+.+
T Consensus 154 RvvllRtGvVLs~~GGaL~~m~~~fk~glGG~~GsGrQ~~SWIhieD~v~~I~fll~~~~lsGp~N~taP~PV~~~~F~~ 233 (297)
T COG1090 154 RVVLLRTGVVLSPDGGALGKMLPLFKLGLGGKLGSGRQWFSWIHIEDLVNAILFLLENEQLSGPFNLTAPNPVRNKEFAH 233 (297)
T ss_pred eEEEEEEEEEecCCCcchhhhcchhhhccCCccCCCCceeeeeeHHHHHHHHHHHHhCcCCCCcccccCCCcCcHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999998776699999999999999999
Q ss_pred HHHHHhcCCCCCcccCCCCCCCCCCCccCCCCCCCeEEEchhHHHhcCcccCCCCHHHHHHHHHH
Q 017914 290 YAWDLVEKKWPGLLKHRKPRENTESSNEKGSSRGEKRVSNVRMKKELGVRLWHPSYKSGLQSIIN 354 (364)
Q Consensus 290 ~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~e~l~~~~~ 354 (364)
.+.+.++++....++. ........++.......-++-+.|+. ..||+++||++++++.+++.
T Consensus 234 al~r~l~RP~~~~vP~--~~~rl~LGe~a~~lL~gQrvlP~kl~-~aGF~F~y~dl~~AL~~il~ 295 (297)
T COG1090 234 ALGRALHRPAILPVPS--FALRLLLGEMADLLLGGQRVLPKKLE-AAGFQFQYPDLEEALADILK 295 (297)
T ss_pred HHHHHhCCCccccCcH--HHHHHHhhhhHHHHhccchhhHHHHH-HCCCeeecCCHHHHHHHHHh
Confidence 9999999873322221 11101111222224555667788995 89999999999999999875
|
|
| >PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-33 Score=246.05 Aligned_cols=241 Identities=20% Similarity=0.260 Sum_probs=185.2
Q ss_pred EEEc-CChhhHHHHHHHHhCC--CEEEEEEeCchhhh--hhhhCCc-eEEEccCChhhH--HhhccCceeeEEEEecCCC
Q 017914 63 LILG-MGFVGRIFAEKIKNQG--WVVSGTCTNVMKKK--ELEQSGF-DVHLFNANETAL--MILTTLKNYTHLLVSIPPL 134 (364)
Q Consensus 63 lVtG-tG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~--~l~~~~~-~~~~~D~~~~~~--~~~~~~d~v~~~~~~~~~~ 134 (364)
|||| +||||++|+++|+++| ++|+++++...... .+...+. .++.+|++|.+. .+++++|+|+|+|+.....
T Consensus 1 LVTGgsGflG~~iv~~Ll~~g~~~~Vr~~d~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~a~~g~d~V~H~Aa~~~~~ 80 (280)
T PF01073_consen 1 LVTGGSGFLGSHIVRQLLERGYIYEVRVLDRSPPPKFLKDLQKSGVKEYIQGDITDPESLEEALEGVDVVFHTAAPVPPW 80 (280)
T ss_pred CEEcCCcHHHHHHHHHHHHCCCceEEEEcccccccccchhhhcccceeEEEeccccHHHHHHHhcCCceEEEeCcccccc
Confidence 6998 9999999999999999 79999998765432 2333333 399999999774 8899999999999876554
Q ss_pred CC-----CCChhhhHHHHHHHHhhcCCccEEEEEccceeecCC-CCcc---ccCCCCC--CCCChhHHHHHHHHHHHHHh
Q 017914 135 EG-----TGDPMLKHGELLRSTLMNGHLQWLGYLSSTGVYGHS-GGAW---VDEDYPA--NPTTELGRLRLSAEKGWLNL 203 (364)
Q Consensus 135 ~~-----~~~~~~~~~~~l~~a~~~~~~~r~v~~Ss~~vy~~~-~~~~---~~E~~~~--~~~~~Y~~sK~~~E~~~~~~ 203 (364)
.. ..+.+...++|++++|++.+++||||+||.++++.. ...+ .+|+.+. .+.+.|+.||..+|++++++
T Consensus 81 ~~~~~~~~~~vNV~GT~nvl~aa~~~~VkrlVytSS~~vv~~~~~~~~~~~~dE~~~~~~~~~~~Y~~SK~~AE~~V~~a 160 (280)
T PF01073_consen 81 GDYPPEEYYKVNVDGTRNVLEAARKAGVKRLVYTSSISVVFDNYKGDPIINGDEDTPYPSSPLDPYAESKALAEKAVLEA 160 (280)
T ss_pred CcccHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcCcceeEeccCCCCcccCCcCCcccccccCchHHHHHHHHHHHHhh
Confidence 31 123455778899999999999999999999998762 2222 3666654 35679999999999999997
Q ss_pred hh---h--cCCcEEEEEecceecCCCCh-HHHHHHhcCcc-cccccccCCcccccccHHHHHHHHHHHccC---C-----
Q 017914 204 GR---D--LGISAQVFRLGGIYGPGRSS-VDTIIKQLPLS-EGQKMRRARQYTSRIHVDDICQVLSASIDK---P----- 268 (364)
Q Consensus 204 ~~---~--~~~~~~ilRp~~v~g~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~---~----- 268 (364)
.. + ..+.+++|||+.|||+++.. ...+......+ ....++.++...+++|++|+|.+++.+++. +
T Consensus 161 ~~~~~~~g~~l~t~~lRP~~IyGp~d~~~~~~~~~~~~~g~~~~~~g~~~~~~~~vyV~NvA~ahvlA~~~L~~~~~~~~ 240 (280)
T PF01073_consen 161 NGSELKNGGRLRTCALRPAGIYGPGDQRLVPRLVKMVRSGLFLFQIGDGNNLFDFVYVENVAHAHVLAAQALLEPGKPER 240 (280)
T ss_pred cccccccccceeEEEEeccEEeCcccccccchhhHHHHhcccceeecCCCceECcEeHHHHHHHHHHHHHHhcccccccc
Confidence 65 2 24999999999999998643 22232221111 223446677789999999999999887642 2
Q ss_pred CCCceEEEeCCCCCC-HHHHHHHHHHHhcCCCCCcc
Q 017914 269 SAWNVYNVVDDDPAP-REEVFAYAWDLVEKKWPGLL 303 (364)
Q Consensus 269 ~~g~~~~i~~~~~~s-~~el~~~i~~~~g~~~~~~~ 303 (364)
..|+.|+|.+++++. +.|+...+.+.+|.+.+..+
T Consensus 241 ~~G~~y~itd~~p~~~~~~f~~~~~~~~G~~~~~~~ 276 (280)
T PF01073_consen 241 VAGQAYFITDGEPVPSFWDFMRPLWEALGYPPPKSI 276 (280)
T ss_pred CCCcEEEEECCCccCcHHHHHHHHHHHCCCCCCccc
Confidence 248999999999999 99999999999999865433
|
3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process |
| >CHL00194 ycf39 Ycf39; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9e-33 Score=249.39 Aligned_cols=280 Identities=14% Similarity=0.099 Sum_probs=198.8
Q ss_pred CeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCChhhH--HhhccCceeeEEEEecCCC-C
Q 017914 60 NRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETAL--MILTTLKNYTHLLVSIPPL-E 135 (364)
Q Consensus 60 ~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~--~~~~~~d~v~~~~~~~~~~-~ 135 (364)
|+||||| |||||++|+++|+++||+|++++|+..+...+...+++++.+|++|++. .+++++|+|+|+++..... .
T Consensus 1 MkIlVtGatG~iG~~lv~~Ll~~g~~V~~l~R~~~~~~~l~~~~v~~v~~Dl~d~~~l~~al~g~d~Vi~~~~~~~~~~~ 80 (317)
T CHL00194 1 MSLLVIGATGTLGRQIVRQALDEGYQVRCLVRNLRKASFLKEWGAELVYGDLSLPETLPPSFKGVTAIIDASTSRPSDLY 80 (317)
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcChHHhhhHhhcCCEEEECCCCCHHHHHHHHCCCCEEEECCCCCCCCcc
Confidence 6899999 9999999999999999999999998766555555689999999999774 7789999999987532211 1
Q ss_pred CCCChhhhHHHHHHHHhhcCCccEEEEEccceeecCCCCccccCCCCCCCCChhHHHHHHHHHHHHHhhhhcCCcEEEEE
Q 017914 136 GTGDPMLKHGELLRSTLMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANPTTELGRLRLSAEKGWLNLGRDLGISAQVFR 215 (364)
Q Consensus 136 ~~~~~~~~~~~~l~~a~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR 215 (364)
...+.......|+++++++.+++||||+||.+... .+..+|..+|.++|++++ +++++++++|
T Consensus 81 ~~~~~~~~~~~~l~~aa~~~gvkr~I~~Ss~~~~~-------------~~~~~~~~~K~~~e~~l~----~~~l~~tilR 143 (317)
T CHL00194 81 NAKQIDWDGKLALIEAAKAAKIKRFIFFSILNAEQ-------------YPYIPLMKLKSDIEQKLK----KSGIPYTIFR 143 (317)
T ss_pred chhhhhHHHHHHHHHHHHHcCCCEEEEeccccccc-------------cCCChHHHHHHHHHHHHH----HcCCCeEEEe
Confidence 12223345568999999999999999999854321 122468999999999875 4689999999
Q ss_pred ecceecCCCChHHHHHHhcCcccccccccCCcccccccHHHHHHHHHHHccCCC-CCceEEEeCCCCCCHHHHHHHHHHH
Q 017914 216 LGGIYGPGRSSVDTIIKQLPLSEGQKMRRARQYTSRIHVDDICQVLSASIDKPS-AWNVYNVVDDDPAPREEVFAYAWDL 294 (364)
Q Consensus 216 p~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~-~g~~~~i~~~~~~s~~el~~~i~~~ 294 (364)
|+.+|+.. +..+...........+..+.+.++|||++|+|++++.+++++. .|++||+++++.+|++|+++.+.+.
T Consensus 144 p~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~~~~~~~ni~g~~~~s~~el~~~~~~~ 220 (317)
T CHL00194 144 LAGFFQGL---ISQYAIPILEKQPIWITNESTPISYIDTQDAAKFCLKSLSLPETKNKTFPLVGPKSWNSSEIISLCEQL 220 (317)
T ss_pred ecHHhhhh---hhhhhhhhccCCceEecCCCCccCccCHHHHHHHHHHHhcCccccCcEEEecCCCccCHHHHHHHHHHH
Confidence 99888632 1111110000111122345677899999999999999998763 5889999999999999999999999
Q ss_pred hcCCCCCcccCCC--C-------CCC---CCCCccC-----CCCCCCeEEEchhHHHhcCcccCCC-CHHHHHHHHHHHh
Q 017914 295 VEKKWPGLLKHRK--P-------REN---TESSNEK-----GSSRGEKRVSNVRMKKELGVRLWHP-SYKSGLQSIINQM 356 (364)
Q Consensus 295 ~g~~~~~~~~~~~--~-------~~~---~~~~~~~-----~~~~~~~~~d~~k~~~~lG~~p~~~-~~~e~l~~~~~~~ 356 (364)
+|++... ...+. . ... ...+... .....+...+.+++++.||+.|..+ ++++++++.+...
T Consensus 221 ~g~~~~~-~~vp~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~ 299 (317)
T CHL00194 221 SGQKAKI-SRVPLFLLKLLRQITGFFEWTWNISDRLAFVEILNTSNNFSSSMAELYKIFKIDPNELISLEDYFQEYFERI 299 (317)
T ss_pred hCCCCeE-EeCCHHHHHHHHHHHhhcccchhhHHHHHHHHHHhcCCCcCCCHHHHHHHhCCChhhhhhHHHHHHHHHHHH
Confidence 9986221 11110 0 000 0111100 1122344457889999999998421 6899998888876
Q ss_pred cccC
Q 017914 357 DQPY 360 (364)
Q Consensus 357 ~~~~ 360 (364)
.+++
T Consensus 300 ~~~~ 303 (317)
T CHL00194 300 LKRL 303 (317)
T ss_pred HHHH
Confidence 6644
|
|
| >PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.5e-34 Score=251.51 Aligned_cols=269 Identities=21% Similarity=0.286 Sum_probs=181.8
Q ss_pred CeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCChhhH--Hhhc--cCceeeEEEEecCCC
Q 017914 60 NRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETAL--MILT--TLKNYTHLLVSIPPL 134 (364)
Q Consensus 60 ~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~--~~~~--~~d~v~~~~~~~~~~ 134 (364)
||||||| +|+||++|+++|.++|++|+++.|. ..|++|.+. ..+. ..|+|+|+++.....
T Consensus 1 MriLI~GasG~lG~~l~~~l~~~~~~v~~~~r~---------------~~dl~d~~~~~~~~~~~~pd~Vin~aa~~~~~ 65 (286)
T PF04321_consen 1 MRILITGASGFLGSALARALKERGYEVIATSRS---------------DLDLTDPEAVAKLLEAFKPDVVINCAAYTNVD 65 (286)
T ss_dssp EEEEEETTTSHHHHHHHHHHTTTSEEEEEESTT---------------CS-TTSHHHHHHHHHHH--SEEEE------HH
T ss_pred CEEEEECCCCHHHHHHHHHHhhCCCEEEEeCch---------------hcCCCCHHHHHHHHHHhCCCeEeccceeecHH
Confidence 7999999 9999999999999999999999776 478888653 3433 579999999764432
Q ss_pred CCCCChhh------hHHHHHHHHhhcCCccEEEEEccceeecCCCCccccCCCCCCCCChhHHHHHHHHHHHHHhhhhcC
Q 017914 135 EGTGDPML------KHGELLRSTLMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANPTTELGRLRLSAEKGWLNLGRDLG 208 (364)
Q Consensus 135 ~~~~~~~~------~~~~~l~~a~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~ 208 (364)
....++.. ....++.+++...+. ++||+||..||+...+.+++|+++..|.+.||++|.++|+.+++...
T Consensus 66 ~ce~~p~~a~~iN~~~~~~la~~~~~~~~-~li~~STd~VFdG~~~~~y~E~d~~~P~~~YG~~K~~~E~~v~~~~~--- 141 (286)
T PF04321_consen 66 ACEKNPEEAYAINVDATKNLAEACKERGA-RLIHISTDYVFDGDKGGPYTEDDPPNPLNVYGRSKLEGEQAVRAACP--- 141 (286)
T ss_dssp HHHHSHHHHHHHHTHHHHHHHHHHHHCT--EEEEEEEGGGS-SSTSSSB-TTS----SSHHHHHHHHHHHHHHHH-S---
T ss_pred hhhhChhhhHHHhhHHHHHHHHHHHHcCC-cEEEeeccEEEcCCcccccccCCCCCCCCHHHHHHHHHHHHHHHhcC---
Confidence 21122222 334577778877776 79999999999888888899999999999999999999999987433
Q ss_pred CcEEEEEecceecCC-CChHHHHHHhcCcccccccccCCcccccccHHHHHHHHHHHccCCCC----CceEEEeCCCCCC
Q 017914 209 ISAQVFRLGGIYGPG-RSSVDTIIKQLPLSEGQKMRRARQYTSRIHVDDICQVLSASIDKPSA----WNVYNVVDDDPAP 283 (364)
Q Consensus 209 ~~~~ilRp~~v~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~~----g~~~~i~~~~~~s 283 (364)
++.|+|++++||+. .+++..+.....-.. ......++.++.++++|+|++++.++++... +++||+++++.+|
T Consensus 142 -~~~IlR~~~~~g~~~~~~~~~~~~~~~~~~-~i~~~~d~~~~p~~~~dlA~~i~~l~~~~~~~~~~~Giyh~~~~~~~S 219 (286)
T PF04321_consen 142 -NALILRTSWVYGPSGRNFLRWLLRRLRQGE-PIKLFDDQYRSPTYVDDLARVILELIEKNLSGASPWGIYHLSGPERVS 219 (286)
T ss_dssp -SEEEEEE-SEESSSSSSHHHHHHHHHHCTS-EEEEESSCEE--EEHHHHHHHHHHHHHHHHH-GGG-EEEE---BS-EE
T ss_pred -CEEEEecceecccCCCchhhhHHHHHhcCC-eeEeeCCceeCCEEHHHHHHHHHHHHHhcccccccceeEEEecCcccC
Confidence 79999999999994 456666655432111 1112346778999999999999999998754 4699999999999
Q ss_pred HHHHHHHHHHHhcCCCCCcccCCCCCCCCCCCccCCCCCCCeEEEchhHHHhcCcccCCCCHHHHHHHHHHHh
Q 017914 284 REEVFAYAWDLVEKKWPGLLKHRKPRENTESSNEKGSSRGEKRVSNVRMKKELGVRLWHPSYKSGLQSIINQM 356 (364)
Q Consensus 284 ~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~e~l~~~~~~~ 356 (364)
+.|+++.+.+.+|.+.+...+... .. ......++.+..+|++|+++.||.++. +|+++|+++++.+
T Consensus 220 ~~e~~~~i~~~~~~~~~~i~~~~~----~~-~~~~~~rp~~~~L~~~kl~~~~g~~~~--~~~~~l~~~~~~~ 285 (286)
T PF04321_consen 220 RYEFAEAIAKILGLDPELIKPVSS----SE-FPRAAPRPRNTSLDCRKLKNLLGIKPP--PWREGLEELVKQY 285 (286)
T ss_dssp HHHHHHHHHHHHTHCTTEEEEESS----TT-STTSSGS-SBE-B--HHHHHCTTS-----BHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCceEEeccc----cc-CCCCCCCCCcccccHHHHHHccCCCCc--CHHHHHHHHHHHh
Confidence 999999999999987422222100 00 112344677889999999999999986 8999999999875
|
1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. |
| >COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-31 Score=227.47 Aligned_cols=266 Identities=16% Similarity=0.211 Sum_probs=211.0
Q ss_pred CeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCChhhH--Hhhc--cCceeeEEEEecCCC
Q 017914 60 NRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETAL--MILT--TLKNYTHLLVSIPPL 134 (364)
Q Consensus 60 ~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~--~~~~--~~d~v~~~~~~~~~~ 134 (364)
|+||||| +|++|..|.+.|. .+++|++++|.. .|++|++. ..+. ..|+|||+|+.....
T Consensus 1 M~iLi~G~~GqLG~~L~~~l~-~~~~v~a~~~~~---------------~Ditd~~~v~~~i~~~~PDvVIn~AAyt~vD 64 (281)
T COG1091 1 MKILITGANGQLGTELRRALP-GEFEVIATDRAE---------------LDITDPDAVLEVIRETRPDVVINAAAYTAVD 64 (281)
T ss_pred CcEEEEcCCChHHHHHHHHhC-CCceEEeccCcc---------------ccccChHHHHHHHHhhCCCEEEECccccccc
Confidence 4599999 9999999999999 779999999863 79999874 5554 579999999987776
Q ss_pred CCCCChhh------hHHHHHHHHhhcCCccEEEEEccceeecCCCCccccCCCCCCCCChhHHHHHHHHHHHHHhhhhcC
Q 017914 135 EGTGDPML------KHGELLRSTLMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANPTTELGRLRLSAEKGWLNLGRDLG 208 (364)
Q Consensus 135 ~~~~~~~~------~~~~~l~~a~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~ 208 (364)
....++.. ....|+..++++.|. ++||+||..||+...+.++.|+++..|.+.||+||+++|..++++.
T Consensus 65 ~aE~~~e~A~~vNa~~~~~lA~aa~~~ga-~lVhiSTDyVFDG~~~~~Y~E~D~~~P~nvYG~sKl~GE~~v~~~~---- 139 (281)
T COG1091 65 KAESEPELAFAVNATGAENLARAAAEVGA-RLVHISTDYVFDGEKGGPYKETDTPNPLNVYGRSKLAGEEAVRAAG---- 139 (281)
T ss_pred cccCCHHHHHHhHHHHHHHHHHHHHHhCC-eEEEeecceEecCCCCCCCCCCCCCCChhhhhHHHHHHHHHHHHhC----
Confidence 55444433 334678888888886 5999999999998888899999999999999999999999998764
Q ss_pred CcEEEEEecceecCCC-ChHHHHHHhcCcccccccccCCcccccccHHHHHHHHHHHccCCCCCceEEEeCCCCCCHHHH
Q 017914 209 ISAQVFRLGGIYGPGR-SSVDTIIKQLPLSEGQKMRRARQYTSRIHVDDICQVLSASIDKPSAWNVYNVVDDDPAPREEV 287 (364)
Q Consensus 209 ~~~~ilRp~~v~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~~g~~~~i~~~~~~s~~el 287 (364)
-+..|+|.+++||..+ +|...+++...-+. ....-.+|..+.++..|+|+++..++.....+++||+++...+||-|+
T Consensus 140 ~~~~I~Rtswv~g~~g~nFv~tml~la~~~~-~l~vv~Dq~gsPt~~~dlA~~i~~ll~~~~~~~~yH~~~~g~~Swydf 218 (281)
T COG1091 140 PRHLILRTSWVYGEYGNNFVKTMLRLAKEGK-ELKVVDDQYGSPTYTEDLADAILELLEKEKEGGVYHLVNSGECSWYEF 218 (281)
T ss_pred CCEEEEEeeeeecCCCCCHHHHHHHHhhcCC-ceEEECCeeeCCccHHHHHHHHHHHHhccccCcEEEEeCCCcccHHHH
Confidence 4689999999999865 56656655422221 111234678888999999999999999987777999999888999999
Q ss_pred HHHHHHHhcCCCCCcccCCCCCCCCCCC--ccCCCCCCCeEEEchhHHHhcCcccCCCCHHHHHHHHHHHh
Q 017914 288 FAYAWDLVEKKWPGLLKHRKPRENTESS--NEKGSSRGEKRVSNVRMKKELGVRLWHPSYKSGLQSIINQM 356 (364)
Q Consensus 288 ~~~i~~~~g~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~e~l~~~~~~~ 356 (364)
++.|.+..+.+. . +..+ .... .....++....+|++|+.+.+|+.+. +|+++++.+++..
T Consensus 219 a~~I~~~~~~~~-~-v~~~-----~~~~~~~~~a~RP~~S~L~~~k~~~~~g~~~~--~w~~~l~~~~~~~ 280 (281)
T COG1091 219 AKAIFEEAGVDG-E-VIEP-----IASAEYPTPAKRPANSSLDTKKLEKAFGLSLP--EWREALKALLDEL 280 (281)
T ss_pred HHHHHHHhCCCc-c-cccc-----ccccccCccCCCCcccccchHHHHHHhCCCCc--cHHHHHHHHHhhc
Confidence 999999998763 1 1111 1111 12345667788999999999999877 7999999988753
|
|
| >TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-32 Score=246.30 Aligned_cols=264 Identities=12% Similarity=0.108 Sum_probs=194.0
Q ss_pred CCCeEEEEc-CChhhHHHHHHHHhCC--CEEEEEEeCchhhhhhh----hCCceEEEccCChhhH--HhhccCceeeEEE
Q 017914 58 SPNRMLILG-MGFVGRIFAEKIKNQG--WVVSGTCTNVMKKKELE----QSGFDVHLFNANETAL--MILTTLKNYTHLL 128 (364)
Q Consensus 58 ~~~~vlVtG-tG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~l~----~~~~~~~~~D~~~~~~--~~~~~~d~v~~~~ 128 (364)
++|+||||| +||||++|+++|+++| ++|++++|+......+. ..++.++.+|++|.+. ..++++|+|+|++
T Consensus 3 ~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~~~~iD~Vih~A 82 (324)
T TIGR03589 3 NNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQKFPAPCLRFFIGDVRDKERLTRALRGVDYVVHAA 82 (324)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHhcCCEEEECc
Confidence 468999999 9999999999999986 79999998765433221 2357899999999774 6678899999999
Q ss_pred EecCCCCCCCCh------hhhHHHHHHHHhhcCCccEEEEEccceeecCCCCccccCCCCCCCCChhHHHHHHHHHHHHH
Q 017914 129 VSIPPLEGTGDP------MLKHGELLRSTLMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANPTTELGRLRLSAEKGWLN 202 (364)
Q Consensus 129 ~~~~~~~~~~~~------~~~~~~~l~~a~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~~sK~~~E~~~~~ 202 (364)
+.........++ ......|+++++...++++||++||.. +..|.++|+.+|..+|.+++.
T Consensus 83 g~~~~~~~~~~~~~~~~~Nv~g~~~ll~aa~~~~~~~iV~~SS~~--------------~~~p~~~Y~~sK~~~E~l~~~ 148 (324)
T TIGR03589 83 ALKQVPAAEYNPFECIRTNINGAQNVIDAAIDNGVKRVVALSTDK--------------AANPINLYGATKLASDKLFVA 148 (324)
T ss_pred ccCCCchhhcCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEeCCC--------------CCCCCCHHHHHHHHHHHHHHH
Confidence 864332212222 223446788888888889999999853 223567899999999999977
Q ss_pred hh---hhcCCcEEEEEecceecCCCChHHHHHHhcCccc-ccccccCCcccccccHHHHHHHHHHHccCCCCCceEEEeC
Q 017914 203 LG---RDLGISAQVFRLGGIYGPGRSSVDTIIKQLPLSE-GQKMRRARQYTSRIHVDDICQVLSASIDKPSAWNVYNVVD 278 (364)
Q Consensus 203 ~~---~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~~g~~~~i~~ 278 (364)
++ ...|++++++|||++||+++..+..+........ ...+.++.+.++|+|++|++++++.++++...+++|+ ++
T Consensus 149 ~~~~~~~~gi~~~~lR~g~v~G~~~~~i~~~~~~~~~~~~~~~i~~~~~~r~~i~v~D~a~a~~~al~~~~~~~~~~-~~ 227 (324)
T TIGR03589 149 ANNISGSKGTRFSVVRYGNVVGSRGSVVPFFKSLKEEGVTELPITDPRMTRFWITLEQGVNFVLKSLERMLGGEIFV-PK 227 (324)
T ss_pred HHhhccccCcEEEEEeecceeCCCCCcHHHHHHHHHhCCCCeeeCCCCceEeeEEHHHHHHHHHHHHhhCCCCCEEc-cC
Confidence 54 3568999999999999998766655554321111 1233456788999999999999999998765577884 66
Q ss_pred CCCCCHHHHHHHHHHHhcCCCCCcccCCCCCCCCCCCccCCCCCCCeEEEchhHHHhcCcccCCCCHHHHHHH
Q 017914 279 DDPAPREEVFAYAWDLVEKKWPGLLKHRKPRENTESSNEKGSSRGEKRVSNVRMKKELGVRLWHPSYKSGLQS 351 (364)
Q Consensus 279 ~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~e~l~~ 351 (364)
+..+++.|+++.+.+..+.+. ... .+ + .......+|.+|++++|||+|++ +++++++.
T Consensus 228 ~~~~sv~el~~~i~~~~~~~~---~~~--------~~--g-~~~~~~~~~~~~~~~~lg~~~~~-~l~~~~~~ 285 (324)
T TIGR03589 228 IPSMKITDLAEAMAPECPHKI---VGI--------RP--G-EKLHEVMITEDDARHTYELGDYY-AILPSISF 285 (324)
T ss_pred CCcEEHHHHHHHHHhhCCeeE---eCC--------CC--C-chhHhhhcChhhhhhhcCCCCeE-EEcccccc
Confidence 677999999999998653321 000 00 0 11122457999999999999999 89999863
|
This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family. |
| >KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-31 Score=232.34 Aligned_cols=301 Identities=16% Similarity=0.092 Sum_probs=221.7
Q ss_pred CCCeEEEEc-CChhhHHHHHHHHhCC--CEEEEEEeCchhh----hhh--hhCCceEEEccCChhhH--HhhccCceeeE
Q 017914 58 SPNRMLILG-MGFVGRIFAEKIKNQG--WVVSGTCTNVMKK----KEL--EQSGFDVHLFNANETAL--MILTTLKNYTH 126 (364)
Q Consensus 58 ~~~~vlVtG-tG~iG~~l~~~L~~~g--~~V~~~~r~~~~~----~~l--~~~~~~~~~~D~~~~~~--~~~~~~d~v~~ 126 (364)
.+.++|||| +||+|++|+++|++++ .+|++++..+... +.. ....++++.+|+.|... .++.++ .|+|
T Consensus 3 ~~~~vlVtGG~GflG~hlv~~L~~~~~~~~irv~D~~~~~~~~~~e~~~~~~~~v~~~~~D~~~~~~i~~a~~~~-~Vvh 81 (361)
T KOG1430|consen 3 KKLSVLVTGGSGFLGQHLVQALLENELKLEIRVVDKTPTQSNLPAELTGFRSGRVTVILGDLLDANSISNAFQGA-VVVH 81 (361)
T ss_pred cCCEEEEECCccHHHHHHHHHHHhcccccEEEEeccCccccccchhhhcccCCceeEEecchhhhhhhhhhccCc-eEEE
Confidence 457899998 9999999999999998 8999999876421 111 13678899999999664 778888 8888
Q ss_pred EEEecCCCCC------CCChhhhHHHHHHHHhhcCCccEEEEEccceeecCCCC-ccccCCCCC--CCCChhHHHHHHHH
Q 017914 127 LLVSIPPLEG------TGDPMLKHGELLRSTLMNGHLQWLGYLSSTGVYGHSGG-AWVDEDYPA--NPTTELGRLRLSAE 197 (364)
Q Consensus 127 ~~~~~~~~~~------~~~~~~~~~~~l~~a~~~~~~~r~v~~Ss~~vy~~~~~-~~~~E~~~~--~~~~~Y~~sK~~~E 197 (364)
+++...+... ....+...+.|++++|.+.+++++||+||..|...... ...+|+.|. +..++|+.||..+|
T Consensus 82 ~aa~~~~~~~~~~~~~~~~vNV~gT~nvi~~c~~~~v~~lIYtSs~~Vvf~g~~~~n~~E~~p~p~~~~d~Y~~sKa~aE 161 (361)
T KOG1430|consen 82 CAASPVPDFVENDRDLAMRVNVNGTLNVIEACKELGVKRLIYTSSAYVVFGGEPIINGDESLPYPLKHIDPYGESKALAE 161 (361)
T ss_pred eccccCccccccchhhheeecchhHHHHHHHHHHhCCCEEEEecCceEEeCCeecccCCCCCCCccccccccchHHHHHH
Confidence 8876544322 12334466789999999999999999999998765544 345666554 34469999999999
Q ss_pred HHHHHhhhhcCCcEEEEEecceecCCCCh-HHHHHHhcCcc-cccccccCCcccccccHHHHHHHHHHHcc----CC--C
Q 017914 198 KGWLNLGRDLGISAQVFRLGGIYGPGRSS-VDTIIKQLPLS-EGQKMRRARQYTSRIHVDDICQVLSASID----KP--S 269 (364)
Q Consensus 198 ~~~~~~~~~~~~~~~ilRp~~v~g~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~i~v~Dva~~~~~~l~----~~--~ 269 (364)
+++++.....++.+++|||..+||+++.. +..+....... .....+.+..+.++++++.+|.+++.+.. +. .
T Consensus 162 ~~Vl~an~~~~l~T~aLR~~~IYGpgd~~~~~~i~~~~~~g~~~f~~g~~~~~~~~~~~~Nva~ahilA~~aL~~~~~~~ 241 (361)
T KOG1430|consen 162 KLVLEANGSDDLYTCALRPPGIYGPGDKRLLPKIVEALKNGGFLFKIGDGENLNDFTYGENVAWAHILAARALLDKSPSV 241 (361)
T ss_pred HHHHHhcCCCCeeEEEEccccccCCCCccccHHHHHHHHccCceEEeeccccccceEEechhHHHHHHHHHHHHhcCCcc
Confidence 99999876667999999999999999653 23333221111 11233555778899999999999876553 22 2
Q ss_pred CCceEEEeCCCCCCHHHHHHHHHHHhcCCCCCcccCCCC----------------C--CCCCCCccCCCCCCCeEEEchh
Q 017914 270 AWNVYNVVDDDPAPREEVFAYAWDLVEKKWPGLLKHRKP----------------R--ENTESSNEKGSSRGEKRVSNVR 331 (364)
Q Consensus 270 ~g~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~----------------~--~~~~~~~~~~~~~~~~~~d~~k 331 (364)
.|+.|+|.+++++...+++..+.+.+|...|..+..+.. + .....+...........+++.|
T Consensus 242 ~Gq~yfI~d~~p~~~~~~~~~l~~~lg~~~~~~~~~p~~l~~~~~~l~e~~~~~l~p~~p~lt~~~v~~~~~~~~f~~~k 321 (361)
T KOG1430|consen 242 NGQFYFITDDTPVRFFDFLSPLVKALGYCLPSSIKLPLFLSYFLAYLLEIVYFLLRPYQPILTRFRVALLGVTRTFSIEK 321 (361)
T ss_pred CceEEEEeCCCcchhhHHHHHHHHhcCCCCCceeecchHHHHHHHHHHHHHHHhccCCCCCcChhheeeeccccccCHHH
Confidence 389999999999888888889999999986532222211 1 1122222233344556789999
Q ss_pred HHHhcCcccCCCCHHHHHHHHHHHhcccC
Q 017914 332 MKKELGVRLWHPSYKSGLQSIINQMDQPY 360 (364)
Q Consensus 332 ~~~~lG~~p~~~~~~e~l~~~~~~~~~~~ 360 (364)
++++|||+|.. +++|++.+++.|+....
T Consensus 322 A~~~lgY~P~~-~~~e~~~~~~~~~~~~~ 349 (361)
T KOG1430|consen 322 AKRELGYKPLV-SLEEAIQRTIHWVASES 349 (361)
T ss_pred HHHhhCCCCcC-CHHHHHHHHHHHHhhhh
Confidence 99999999998 89999999999887644
|
|
| >COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-31 Score=219.59 Aligned_cols=301 Identities=15% Similarity=0.101 Sum_probs=224.8
Q ss_pred CCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchh--hh--------hhhhCCceEEEccCChhh-H-Hhh--ccCc
Q 017914 58 SPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMK--KK--------ELEQSGFDVHLFNANETA-L-MIL--TTLK 122 (364)
Q Consensus 58 ~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~--~~--------~l~~~~~~~~~~D~~~~~-~-~~~--~~~d 122 (364)
++++.|||| ||+-|++|++.|+++||+|+++.|+... .. ......+.++.+|++|.. + .++ ...|
T Consensus 1 ~~K~ALITGITGQDGsYLa~lLLekGY~VhGi~Rrss~~n~~ri~L~~~~~~~~~~l~l~~gDLtD~~~l~r~l~~v~Pd 80 (345)
T COG1089 1 MGKVALITGITGQDGSYLAELLLEKGYEVHGIKRRSSSFNTPRIHLYEDPHLNDPRLHLHYGDLTDSSNLLRILEEVQPD 80 (345)
T ss_pred CCceEEEecccCCchHHHHHHHHhcCcEEEEEeeccccCCcccceeccccccCCceeEEEeccccchHHHHHHHHhcCch
Confidence 357899999 9999999999999999999999996332 11 112245789999999965 3 555 4569
Q ss_pred eeeEEEEecCCCCCCCChhh------hHHHHHHHHhhcCCc--cEEEEEccceeecCCCCccccCCCCCCCCChhHHHHH
Q 017914 123 NYTHLLVSIPPLEGTGDPML------KHGELLRSTLMNGHL--QWLGYLSSTGVYGHSGGAWVDEDYPANPTTELGRLRL 194 (364)
Q Consensus 123 ~v~~~~~~~~~~~~~~~~~~------~~~~~l~~a~~~~~~--~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~~sK~ 194 (364)
.|+|+++......++..|.. .++.+++++++..+. .||.+.||+..||.....|.+|++|+.|.++|+.+|.
T Consensus 81 EIYNLaAQS~V~vSFe~P~~T~~~~~iGtlrlLEaiR~~~~~~~rfYQAStSE~fG~v~~~pq~E~TPFyPrSPYAvAKl 160 (345)
T COG1089 81 EIYNLAAQSHVGVSFEQPEYTADVDAIGTLRLLEAIRILGEKKTRFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAKL 160 (345)
T ss_pred hheeccccccccccccCcceeeeechhHHHHHHHHHHHhCCcccEEEecccHHhhcCcccCccccCCCCCCCCHHHHHHH
Confidence 99999999887777766654 345688888885443 5899999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhhcCCcEEEEEecceecCCCC--hHH----HHHHhcCc--ccccccccCCcccccccHHHHHHHHHHHcc
Q 017914 195 SAEKGWLNLGRDLGISAQVFRLGGIYGPGRS--SVD----TIIKQLPL--SEGQKMRRARQYTSRIHVDDICQVLSASID 266 (364)
Q Consensus 195 ~~E~~~~~~~~~~~~~~~ilRp~~v~g~~~~--~~~----~~~~~~~~--~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~ 266 (364)
.+--+..+|.+.+|+-.+.=.+.+-=+|.++ |+. +....... .....+|+-+..+||=|..|.++++..+++
T Consensus 161 Ya~W~tvNYResYgl~AcnGILFNHESP~Rge~FVTRKIt~ava~Ik~G~q~~l~lGNldAkRDWG~A~DYVe~mwlmLQ 240 (345)
T COG1089 161 YAYWITVNYRESYGLFACNGILFNHESPLRGETFVTRKITRAVARIKLGLQDKLYLGNLDAKRDWGHAKDYVEAMWLMLQ 240 (345)
T ss_pred HHHheeeehHhhcCceeecceeecCCCCCCccceehHHHHHHHHHHHccccceEEeccccccccccchHHHHHHHHHHHc
Confidence 9999999999999988776555555455433 322 11222222 233456788899999999999999999999
Q ss_pred CCCCCceEEEeCCCCCCHHHHHHHHHHHhcCCCCCc---ccC--CCCCCC-----CCCCccCCCCCCCeEEEchhHHHhc
Q 017914 267 KPSAWNVYNVVDDDPAPREEVFAYAWDLVEKKWPGL---LKH--RKPREN-----TESSNEKGSSRGEKRVSNVRMKKEL 336 (364)
Q Consensus 267 ~~~~g~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~---~~~--~~~~~~-----~~~~~~~~~~~~~~~~d~~k~~~~l 336 (364)
++.+ ..|.++.|+..|++|++++..+..|.++... +.. ..+..+ .....+.+....-..-|++|+++.|
T Consensus 241 q~~P-ddyViATg~t~sVrefv~~Af~~~g~~l~w~g~g~~e~g~da~~G~~~V~idp~~fRPaEV~~Llgdp~KA~~~L 319 (345)
T COG1089 241 QEEP-DDYVIATGETHSVREFVELAFEMVGIDLEWEGTGVDEKGVDAKTGKIIVEIDPRYFRPAEVDLLLGDPTKAKEKL 319 (345)
T ss_pred cCCC-CceEEecCceeeHHHHHHHHHHHcCceEEEeeccccccccccccCceeEEECccccCchhhhhhcCCHHHHHHHc
Confidence 8874 5999999999999999999999999663210 000 000000 0111112222333446999999999
Q ss_pred CcccCCCCHHHHHHHHHHHhcccC
Q 017914 337 GVRLWHPSYKSGLQSIINQMDQPY 360 (364)
Q Consensus 337 G~~p~~~~~~e~l~~~~~~~~~~~ 360 (364)
||+|++ +|+|.+++++++-.+..
T Consensus 320 GW~~~~-~~~elv~~Mv~~dl~~~ 342 (345)
T COG1089 320 GWRPEV-SLEELVREMVEADLEAA 342 (345)
T ss_pred CCcccc-CHHHHHHHHHHHHHHHh
Confidence 999999 89999999999866544
|
|
| >PRK05865 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.98 E-value=5.8e-31 Score=257.81 Aligned_cols=255 Identities=13% Similarity=0.076 Sum_probs=187.3
Q ss_pred CeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCChhhH--HhhccCceeeEEEEecCCCCC
Q 017914 60 NRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETAL--MILTTLKNYTHLLVSIPPLEG 136 (364)
Q Consensus 60 ~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~--~~~~~~d~v~~~~~~~~~~~~ 136 (364)
|+||||| +||||++++++|+++|++|++++|+.... . ..++.++.+|++|.+. ..++++|.|+|+++....
T Consensus 1 MkILVTGATGfIGs~La~~Ll~~G~~Vv~l~R~~~~~--~-~~~v~~v~gDL~D~~~l~~al~~vD~VVHlAa~~~~--- 74 (854)
T PRK05865 1 MRIAVTGASGVLGRGLTARLLSQGHEVVGIARHRPDS--W-PSSADFIAADIRDATAVESAMTGADVVAHCAWVRGR--- 74 (854)
T ss_pred CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCchhh--c-ccCceEEEeeCCCHHHHHHHHhCCCEEEECCCcccc---
Confidence 5899999 99999999999999999999999975322 1 1467899999999764 667889999999864322
Q ss_pred CCChhhhHHHHHHHHhhcCCccEEEEEccceeecCCCCccccCCCCCCCCChhHHHHHHHHHHHHHhhhhcCCcEEEEEe
Q 017914 137 TGDPMLKHGELLRSTLMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANPTTELGRLRLSAEKGWLNLGRDLGISAQVFRL 216 (364)
Q Consensus 137 ~~~~~~~~~~~l~~a~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilRp 216 (364)
..+.+.....|+++++++.++++|||+||.. |.++|+++. +++++++++||
T Consensus 75 ~~~vNv~GT~nLLeAa~~~gvkr~V~iSS~~-------------------------K~aaE~ll~----~~gl~~vILRp 125 (854)
T PRK05865 75 NDHINIDGTANVLKAMAETGTGRIVFTSSGH-------------------------QPRVEQMLA----DCGLEWVAVRC 125 (854)
T ss_pred hHHHHHHHHHHHHHHHHHcCCCeEEEECCcH-------------------------HHHHHHHHH----HcCCCEEEEEe
Confidence 2233445567889999988999999999842 888898875 35899999999
Q ss_pred cceecCCCC-hHHHHHHhcCcccccccccCCcccccccHHHHHHHHHHHccCC-CCCceEEEeCCCCCCHHHHHHHHHHH
Q 017914 217 GGIYGPGRS-SVDTIIKQLPLSEGQKMRRARQYTSRIHVDDICQVLSASIDKP-SAWNVYNVVDDDPAPREEVFAYAWDL 294 (364)
Q Consensus 217 ~~v~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~-~~g~~~~i~~~~~~s~~el~~~i~~~ 294 (364)
+++||++.. ++..+.. ... ...+.+.+.++|||++|+|++++.+++++ ..+++||+++++.+|++|+++.+.+.
T Consensus 126 ~~VYGP~~~~~i~~ll~---~~v-~~~G~~~~~~dfIhVdDVA~Ai~~aL~~~~~~ggvyNIgsg~~~Si~EIae~l~~~ 201 (854)
T PRK05865 126 ALIFGRNVDNWVQRLFA---LPV-LPAGYADRVVQVVHSDDAQRLLVRALLDTVIDSGPVNLAAPGELTFRRIAAALGRP 201 (854)
T ss_pred ceEeCCChHHHHHHHhc---Cce-eccCCCCceEeeeeHHHHHHHHHHHHhCCCcCCCeEEEECCCcccHHHHHHHHhhh
Confidence 999998732 2222221 111 11234556779999999999999998754 34679999999999999999998875
Q ss_pred hcCCCCCcccCCCCCCCCCCCccCCCCCCCeEEEchhHHHhcCcccCCCCHHHHHHHHHHHhcccC
Q 017914 295 VEKKWPGLLKHRKPRENTESSNEKGSSRGEKRVSNVRMKKELGVRLWHPSYKSGLQSIINQMDQPY 360 (364)
Q Consensus 295 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~e~l~~~~~~~~~~~ 360 (364)
.. +.+..... ....... .........+|++|++++|||+|++ +++|+|+++++|++.+.
T Consensus 202 ~~-~v~~~~~~----~~~~~~~-~~~~~~~~~~D~sKar~~LGw~P~~-sLeeGL~dti~~~r~ri 260 (854)
T PRK05865 202 MV-PIGSPVLR----RVTSFAE-LELLHSAPLMDVTLLRDRWGFQPAW-NAEECLEDFTLAVRGRI 260 (854)
T ss_pred hc-cCCchhhh----hccchhh-hhcccCCccCCHHHHHHHhCCCCCC-CHHHHHHHHHHHHHhhc
Confidence 32 11110000 0000000 1112234468999999999999999 89999999999998743
|
|
| >PLN02583 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.97 E-value=3e-30 Score=230.68 Aligned_cols=264 Identities=14% Similarity=0.129 Sum_probs=184.9
Q ss_pred CCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhh------hhhh--hCCceEEEccCChhhH--HhhccCceeeE
Q 017914 58 SPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKK------KELE--QSGFDVHLFNANETAL--MILTTLKNYTH 126 (364)
Q Consensus 58 ~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~------~~l~--~~~~~~~~~D~~~~~~--~~~~~~d~v~~ 126 (364)
.+++||||| +||||++++++|+++||+|++++|+.... ..+. ..+++++.+|++|.+. ..+.++|.|+|
T Consensus 5 ~~k~vlVTGatG~IG~~lv~~Ll~~G~~V~~~~R~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~~~~~l~~~d~v~~ 84 (297)
T PLN02583 5 SSKSVCVMDASGYVGFWLVKRLLSRGYTVHAAVQKNGETEIEKEIRGLSCEEERLKVFDVDPLDYHSILDALKGCSGLFC 84 (297)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEEcCchhhhHHHHHHhcccCCCceEEEEecCCCHHHHHHHHcCCCEEEE
Confidence 357899999 99999999999999999999999964321 1111 1357889999999764 77889999999
Q ss_pred EEEecCCCCC----CCChhhhHHHHHHHHhhcC-CccEEEEEccceee--cCC---CCccccCCCCCCCC------ChhH
Q 017914 127 LLVSIPPLEG----TGDPMLKHGELLRSTLMNG-HLQWLGYLSSTGVY--GHS---GGAWVDEDYPANPT------TELG 190 (364)
Q Consensus 127 ~~~~~~~~~~----~~~~~~~~~~~l~~a~~~~-~~~r~v~~Ss~~vy--~~~---~~~~~~E~~~~~~~------~~Y~ 190 (364)
++........ ..+.......++++++... +++|+|++||.+.+ +.. ...+++|+.+..+. ..|+
T Consensus 85 ~~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~v~riV~~SS~~a~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~ 164 (297)
T PLN02583 85 CFDPPSDYPSYDEKMVDVEVRAAHNVLEACAQTDTIEKVVFTSSLTAVIWRDDNISTQKDVDERSWSDQNFCRKFKLWHA 164 (297)
T ss_pred eCccCCcccccHHHHHHHHHHHHHHHHHHHHhcCCccEEEEecchHheecccccCCCCCCCCcccCCCHHHHhhcccHHH
Confidence 7654322111 1123345567888888764 68999999998654 311 23357777654322 2799
Q ss_pred HHHHHHHHHHHHhhhhcCCcEEEEEecceecCCCChHHHHHHhcCcccccccccCCcccccccHHHHHHHHHHHccCCCC
Q 017914 191 RLRLSAEKGWLNLGRDLGISAQVFRLGGIYGPGRSSVDTIIKQLPLSEGQKMRRARQYTSRIHVDDICQVLSASIDKPSA 270 (364)
Q Consensus 191 ~sK~~~E~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~~ 270 (364)
.+|..+|++++++++..+++++++||+++||+.......++.... . ..+...++|||++|+|++++.+++.+..
T Consensus 165 ~sK~~aE~~~~~~~~~~gi~~v~lrp~~v~Gp~~~~~~~~~~~~~-----~-~~~~~~~~~v~V~Dva~a~~~al~~~~~ 238 (297)
T PLN02583 165 LAKTLSEKTAWALAMDRGVNMVSINAGLLMGPSLTQHNPYLKGAA-----Q-MYENGVLVTVDVNFLVDAHIRAFEDVSS 238 (297)
T ss_pred HHHHHHHHHHHHHHHHhCCcEEEEcCCcccCCCCCCchhhhcCCc-----c-cCcccCcceEEHHHHHHHHHHHhcCccc
Confidence 999999999999987789999999999999997543222221110 0 1112346799999999999999998877
Q ss_pred CceEEEeCCCCCCHHHHHHHHHHHhcCC-CCCcccCCCCCCCCCCCccCCCCCCCeEEEchhHHHhcCccc
Q 017914 271 WNVYNVVDDDPAPREEVFAYAWDLVEKK-WPGLLKHRKPRENTESSNEKGSSRGEKRVSNVRMKKELGVRL 340 (364)
Q Consensus 271 g~~~~i~~~~~~s~~el~~~i~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p 340 (364)
++.|+++++....+.++++++.+.+..- .+.. ... .........++++|++ +|||++
T Consensus 239 ~~r~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~-----------~~~-~~~~~~~~~~~~~k~~-~l~~~~ 296 (297)
T PLN02583 239 YGRYLCFNHIVNTEEDAVKLAQMLSPLIPSPPP-----------YEM-QGSEVYQQRIRNKKLN-KLMEDF 296 (297)
T ss_pred CCcEEEecCCCccHHHHHHHHHHhCCCCCCCCc-----------ccc-cCCCccccccChHHHH-HhCccc
Confidence 6689988866566788999999987432 1110 000 0112234678999996 799874
|
|
| >PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.1e-31 Score=232.43 Aligned_cols=216 Identities=23% Similarity=0.356 Sum_probs=174.4
Q ss_pred EEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhh-hCCceEEEccCChhhH--Hhhcc--CceeeEEEEecCCCC
Q 017914 62 MLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELE-QSGFDVHLFNANETAL--MILTT--LKNYTHLLVSIPPLE 135 (364)
Q Consensus 62 vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~-~~~~~~~~~D~~~~~~--~~~~~--~d~v~~~~~~~~~~~ 135 (364)
||||| |||||++++++|+++|++|+.+.|+........ ..++.++.+|+.|.+. +.++. +|.|+|+++......
T Consensus 1 IlI~GatG~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~dl~~~~~~~~~~~~~~~d~vi~~a~~~~~~~ 80 (236)
T PF01370_consen 1 ILITGATGFIGSALVRQLLKKGHEVIVLSRSSNSESFEEKKLNVEFVIGDLTDKEQLEKLLEKANIDVVIHLAAFSSNPE 80 (236)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTTEEEEEESCSTGGHHHHHHTTEEEEESETTSHHHHHHHHHHHTESEEEEEBSSSSHHH
T ss_pred EEEEccCCHHHHHHHHHHHHcCCccccccccccccccccccceEEEEEeeccccccccccccccCceEEEEeeccccccc
Confidence 79999 999999999999999999999999876554322 2488999999998764 55544 599999997643111
Q ss_pred CC------CChhhhHHHHHHHHhhcCCccEEEEEccceeecCCCCccccCCCCCCCCChhHHHHHHHHHHHHHhhhhcCC
Q 017914 136 GT------GDPMLKHGELLRSTLMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANPTTELGRLRLSAEKGWLNLGRDLGI 209 (364)
Q Consensus 136 ~~------~~~~~~~~~~l~~a~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~ 209 (364)
.. .........+++++++..+++++||+||..+|+.....+++|+.+..|.++|+.+|...|++++.+.+++++
T Consensus 81 ~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~i~~sS~~~y~~~~~~~~~e~~~~~~~~~Y~~~K~~~e~~~~~~~~~~~~ 160 (236)
T PF01370_consen 81 SFEDPEEIIEANVQGTRNLLEAAREAGVKRFIFLSSASVYGDPDGEPIDEDSPINPLSPYGASKRAAEELLRDYAKKYGL 160 (236)
T ss_dssp HHHSHHHHHHHHHHHHHHHHHHHHHHTTSEEEEEEEGGGGTSSSSSSBETTSGCCHSSHHHHHHHHHHHHHHHHHHHHTS
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 11 112334557888999988889999999999999887778999999999999999999999999999988899
Q ss_pred cEEEEEecceecCC------CChHHHHHHhcCccc-ccccccCCcccccccHHHHHHHHHHHccCCC-CCceEEEe
Q 017914 210 SAQVFRLGGIYGPG------RSSVDTIIKQLPLSE-GQKMRRARQYTSRIHVDDICQVLSASIDKPS-AWNVYNVV 277 (364)
Q Consensus 210 ~~~ilRp~~v~g~~------~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~-~g~~~~i~ 277 (364)
+++++||+.+||+. ...+..++....... ...++.+++.++|+|++|+|++++.+++++. .+++||++
T Consensus 161 ~~~~~R~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~yNig 236 (236)
T PF01370_consen 161 RVTILRPPNVYGPGNPNNNSSSFLPSLIRQALKGKPIKIPGDGSQVRDFIHVDDLAEAIVAALENPKAAGGIYNIG 236 (236)
T ss_dssp EEEEEEESEEESTTSSSSSTSSHHHHHHHHHHTTSSEEEESTSSCEEEEEEHHHHHHHHHHHHHHSCTTTEEEEES
T ss_pred ccccccccccccccccccccccccchhhHHhhcCCcccccCCCCCccceEEHHHHHHHHHHHHhCCCCCCCEEEeC
Confidence 99999999999999 234454444422222 2345678899999999999999999999998 78999985
|
The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B .... |
| >PRK07201 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.7e-29 Score=250.37 Aligned_cols=299 Identities=14% Similarity=0.097 Sum_probs=208.8
Q ss_pred CeEEEEc-CChhhHHHHHHHH--hCCCEEEEEEeCchhhh--hh----hhCCceEEEccCChhh-------HHhhccCce
Q 017914 60 NRMLILG-MGFVGRIFAEKIK--NQGWVVSGTCTNVMKKK--EL----EQSGFDVHLFNANETA-------LMILTTLKN 123 (364)
Q Consensus 60 ~~vlVtG-tG~iG~~l~~~L~--~~g~~V~~~~r~~~~~~--~l----~~~~~~~~~~D~~~~~-------~~~~~~~d~ 123 (364)
|+||||| |||||++|+++|+ +.|++|++++|+..... .+ ...+++++.+|++|++ ...+.++|.
T Consensus 1 m~ILVTGatGfIG~~lv~~Ll~~~~g~~V~~l~R~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~l~~~D~ 80 (657)
T PRK07201 1 MRYFVTGGTGFIGRRLVSRLLDRRREATVHVLVRRQSLSRLEALAAYWGADRVVPLVGDLTEPGLGLSEADIAELGDIDH 80 (657)
T ss_pred CeEEEeCCccHHHHHHHHHHHhcCCCCEEEEEECcchHHHHHHHHHhcCCCcEEEEecccCCccCCcCHHHHHHhcCCCE
Confidence 5899999 9999999999999 57999999999643211 11 1146889999999843 233478999
Q ss_pred eeEEEEecCCCCCC---CChhhhHHHHHHHHhhcCCccEEEEEccceeecCCCCccccCCC---CCCCCChhHHHHHHHH
Q 017914 124 YTHLLVSIPPLEGT---GDPMLKHGELLRSTLMNGHLQWLGYLSSTGVYGHSGGAWVDEDY---PANPTTELGRLRLSAE 197 (364)
Q Consensus 124 v~~~~~~~~~~~~~---~~~~~~~~~~l~~a~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~---~~~~~~~Y~~sK~~~E 197 (364)
|+|+++........ .........++++++++.++++|||+||.++||...+ +.+|+. +..+.+.|+.+|+++|
T Consensus 81 Vih~Aa~~~~~~~~~~~~~~nv~gt~~ll~~a~~~~~~~~v~~SS~~v~g~~~~-~~~e~~~~~~~~~~~~Y~~sK~~~E 159 (657)
T PRK07201 81 VVHLAAIYDLTADEEAQRAANVDGTRNVVELAERLQAATFHHVSSIAVAGDYEG-VFREDDFDEGQGLPTPYHRTKFEAE 159 (657)
T ss_pred EEECceeecCCCCHHHHHHHHhHHHHHHHHHHHhcCCCeEEEEeccccccCccC-ccccccchhhcCCCCchHHHHHHHH
Confidence 99999875543221 1233455678888888888999999999999986543 344543 2234578999999999
Q ss_pred HHHHHhhhhcCCcEEEEEecceecCCCCh----------HHHHHHh-cCccc-ccccccCCcccccccHHHHHHHHHHHc
Q 017914 198 KGWLNLGRDLGISAQVFRLGGIYGPGRSS----------VDTIIKQ-LPLSE-GQKMRRARQYTSRIHVDDICQVLSASI 265 (364)
Q Consensus 198 ~~~~~~~~~~~~~~~ilRp~~v~g~~~~~----------~~~~~~~-~~~~~-~~~~~~~~~~~~~i~v~Dva~~~~~~l 265 (364)
+++++ ..+++++++||+.+||+.... +..++.. ..... ....+.+....+++|++|+++++..++
T Consensus 160 ~~~~~---~~g~~~~ilRp~~v~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~vddva~ai~~~~ 236 (657)
T PRK07201 160 KLVRE---ECGLPWRVYRPAVVVGDSRTGEMDKIDGPYYFFKVLAKLAKLPSWLPMVGPDGGRTNIVPVDYVADALDHLM 236 (657)
T ss_pred HHHHH---cCCCcEEEEcCCeeeecCCCCccccCCcHHHHHHHHHHhccCCcccccccCCCCeeeeeeHHHHHHHHHHHh
Confidence 99875 358999999999999975321 1111111 11111 112234456689999999999999998
Q ss_pred cCCC-CCceEEEeCCCCCCHHHHHHHHHHHhcCCC---CC-cccCC----CCC-C-------------CCCCCccCCCCC
Q 017914 266 DKPS-AWNVYNVVDDDPAPREEVFAYAWDLVEKKW---PG-LLKHR----KPR-E-------------NTESSNEKGSSR 322 (364)
Q Consensus 266 ~~~~-~g~~~~i~~~~~~s~~el~~~i~~~~g~~~---~~-~~~~~----~~~-~-------------~~~~~~~~~~~~ 322 (364)
+.+. .|++||+++++++++.|+++.+.+.+|.+. +. .++.. ... . ....+...+...
T Consensus 237 ~~~~~~g~~~ni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 316 (657)
T PRK07201 237 HKDGRDGQTFHLTDPKPQRVGDIYNAFARAAGAPPDARLFGFLPGFVAAPLLAALGPVRRLRNAVATQLGIPPEVLDFVN 316 (657)
T ss_pred cCcCCCCCEEEeCCCCCCcHHHHHHHHHHHhCCCccccccccCChHHHHHHhhhcchhhHHHHHHHHhcCCCHHHHHhcc
Confidence 8653 478999999999999999999999999874 11 11110 000 0 000011112233
Q ss_pred CCeEEEchhHHHhc-CcccCCCCHHHHHHHHHHHhcccCCC
Q 017914 323 GEKRVSNVRMKKEL-GVRLWHPSYKSGLQSIINQMDQPYQC 362 (364)
Q Consensus 323 ~~~~~d~~k~~~~l-G~~p~~~~~~e~l~~~~~~~~~~~~~ 362 (364)
....+|++|+++.| +.....|.+.+.+...++||.+++++
T Consensus 317 ~~~~f~~~~~~~~L~~~~~~~p~~~~~~~~~~~~~~~~~~~ 357 (657)
T PRK07201 317 YPTTFDSRETRAALKGSGIEVPRLASYAPRLWDYWERHLDP 357 (657)
T ss_pred CCCeeccHHHHHHhccCCcCCCChHHHHHHHHHHHHhcCCh
Confidence 44678999999998 33344568999999999999888765
|
|
| >KOG1431 consensus GDP-L-fucose synthetase [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.6e-30 Score=206.69 Aligned_cols=278 Identities=13% Similarity=0.096 Sum_probs=212.1
Q ss_pred CCeEEEEc-CChhhHHHHHHHHhCCC--EEEEEEeCchhhhhhhhCCceEEEccCChhhH--Hhh--ccCceeeEEEEec
Q 017914 59 PNRMLILG-MGFVGRIFAEKIKNQGW--VVSGTCTNVMKKKELEQSGFDVHLFNANETAL--MIL--TTLKNYTHLLVSI 131 (364)
Q Consensus 59 ~~~vlVtG-tG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~--~~~--~~~d~v~~~~~~~ 131 (364)
+++||||| +|.+|++|.+.+..+|. +-.++.-+. .+|+++... ..+ .....|+|+|+..
T Consensus 1 s~kIlVtGg~GLVGsAi~~vv~~q~~~~e~wvf~~sk--------------d~DLt~~a~t~~lF~~ekPthVIhlAAmV 66 (315)
T KOG1431|consen 1 SKKILVTGGTGLVGSAIVKVVQEQGFDDENWVFIGSK--------------DADLTNLADTRALFESEKPTHVIHLAAMV 66 (315)
T ss_pred CceEEEecCCchHHHHHHHHHHhcCCCCcceEEeccc--------------cccccchHHHHHHHhccCCceeeehHhhh
Confidence 47999998 99999999999999986 434443322 267777443 233 4568899999876
Q ss_pred CCCCC-------CCChhhhHHHHHHHHhhcCCccEEEEEccceeecCCCCccccCCC----CCCCC-ChhHHHHHHHHHH
Q 017914 132 PPLEG-------TGDPMLKHGELLRSTLMNGHLQWLGYLSSTGVYGHSGGAWVDEDY----PANPT-TELGRLRLSAEKG 199 (364)
Q Consensus 132 ~~~~~-------~~~~~~~~~~~l~~a~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~----~~~~~-~~Y~~sK~~~E~~ 199 (364)
+.... +-......+.|++..+.+.|+++++++.|..+|......|++|.. |+.|. ..|+..|..+.-.
T Consensus 67 GGlf~N~~ynldF~r~Nl~indNVlhsa~e~gv~K~vsclStCIfPdkt~yPIdEtmvh~gpphpsN~gYsyAKr~idv~ 146 (315)
T KOG1431|consen 67 GGLFHNNTYNLDFIRKNLQINDNVLHSAHEHGVKKVVSCLSTCIFPDKTSYPIDETMVHNGPPHPSNFGYSYAKRMIDVQ 146 (315)
T ss_pred cchhhcCCCchHHHhhcceechhHHHHHHHhchhhhhhhcceeecCCCCCCCCCHHHhccCCCCCCchHHHHHHHHHHHH
Confidence 65321 112334556799999999999999999999999988888999975 44443 4699999888888
Q ss_pred HHHhhhhcCCcEEEEEecceecCCCCh-------HHHHHH----hcCcc--cccccccCCcccccccHHHHHHHHHHHcc
Q 017914 200 WLNLGRDLGISAQVFRLGGIYGPGRSS-------VDTIIK----QLPLS--EGQKMRRARQYTSRIHVDDICQVLSASID 266 (364)
Q Consensus 200 ~~~~~~~~~~~~~ilRp~~v~g~~~~~-------~~~~~~----~~~~~--~~~~~~~~~~~~~~i~v~Dva~~~~~~l~ 266 (364)
-++|..++|..++.+-|.++||+.+++ +..++. ...-+ .....|+|...+.|||++|+|++++.++.
T Consensus 147 n~aY~~qhg~~~tsviPtNvfGphDNfnpe~sHVlPali~r~h~ak~~gtd~~~VwGsG~PlRqFiys~DLA~l~i~vlr 226 (315)
T KOG1431|consen 147 NQAYRQQHGRDYTSVIPTNVFGPHDNFNPENSHVLPALIHRFHEAKRNGTDELTVWGSGSPLRQFIYSDDLADLFIWVLR 226 (315)
T ss_pred HHHHHHHhCCceeeeccccccCCCCCCCcccccchHHHHHHHHHHHhcCCceEEEecCCChHHHHhhHhHHHHHHHHHHH
Confidence 889999999999999999999998764 222222 21111 22355888899999999999999999999
Q ss_pred CCCCCceEEEeCCC--CCCHHHHHHHHHHHhcCCCCCcccCCCCCCCCCCCccCCCCCCCeEEEchhHHHhcCcccCCCC
Q 017914 267 KPSAWNVYNVVDDD--PAPREEVFAYAWDLVEKKWPGLLKHRKPRENTESSNEKGSSRGEKRVSNVRMKKELGVRLWHPS 344 (364)
Q Consensus 267 ~~~~g~~~~i~~~~--~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~ 344 (364)
+-+.-+..+++.++ .+|.+|+++++.+++|... ...+- .....-.-...+|++|++ .|+|.|++++
T Consensus 227 ~Y~~vEpiils~ge~~EVtI~e~aeaV~ea~~F~G-~l~~D----------ttK~DGq~kKtasnsKL~-sl~pd~~ft~ 294 (315)
T KOG1431|consen 227 EYEGVEPIILSVGESDEVTIREAAEAVVEAVDFTG-KLVWD----------TTKSDGQFKKTASNSKLR-SLLPDFKFTP 294 (315)
T ss_pred hhcCccceEeccCccceeEHHHHHHHHHHHhCCCc-eEEee----------ccCCCCCcccccchHHHH-HhCCCcccCh
Confidence 87666678888887 7999999999999998872 22111 012233344678999996 8999999977
Q ss_pred HHHHHHHHHHHhcccCCC
Q 017914 345 YKSGLQSIINQMDQPYQC 362 (364)
Q Consensus 345 ~~e~l~~~~~~~~~~~~~ 362 (364)
++++|+++++||.+|+++
T Consensus 295 l~~ai~~t~~Wy~~Ny~q 312 (315)
T KOG1431|consen 295 LEQAISETVQWYLDNYEQ 312 (315)
T ss_pred HHHHHHHHHHHHHHhHHh
Confidence 999999999999999875
|
|
| >PLN02996 fatty acyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.4e-28 Score=229.98 Aligned_cols=241 Identities=12% Similarity=0.033 Sum_probs=173.5
Q ss_pred CCCCCeEEEEc-CChhhHHHHHHHHhCC---CEEEEEEeCchhhh-------hh-----h---------------hCCce
Q 017914 56 WQSPNRMLILG-MGFVGRIFAEKIKNQG---WVVSGTCTNVMKKK-------EL-----E---------------QSGFD 104 (364)
Q Consensus 56 ~~~~~~vlVtG-tG~iG~~l~~~L~~~g---~~V~~~~r~~~~~~-------~l-----~---------------~~~~~ 104 (364)
...+++||||| |||||++|+++|++.+ .+|+++.|...... .+ . ..+++
T Consensus 8 ~~~~k~VlvTGaTGFlG~~ll~~LL~~~~~v~~I~~LvR~~~~~~~~~rl~~~~~~~~~f~~~~~~~~~~~~~~~~~kv~ 87 (491)
T PLN02996 8 FLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRASDAKSATQRLHDEVIGKDLFKVLREKLGENLNSLISEKVT 87 (491)
T ss_pred HhCCCeEEEeCCCcHHHHHHHHHHHhhCCCCCEEEEEEeCCCCCCHHHHHHHHHhhchHHHHHHHhcchhhhhhhhcCEE
Confidence 46678999999 9999999999999864 36899999653211 10 0 14688
Q ss_pred EEEccCChh-------h-H-HhhccCceeeEEEEecCCCCCCC---ChhhhHHHHHHHHhhcC-CccEEEEEccceeecC
Q 017914 105 VHLFNANET-------A-L-MILTTLKNYTHLLVSIPPLEGTG---DPMLKHGELLRSTLMNG-HLQWLGYLSSTGVYGH 171 (364)
Q Consensus 105 ~~~~D~~~~-------~-~-~~~~~~d~v~~~~~~~~~~~~~~---~~~~~~~~~l~~a~~~~-~~~r~v~~Ss~~vy~~ 171 (364)
++.+|++++ + . .+++++|.|+|+|+......... ..+...+.+++++++.. ++++|||+||..|||.
T Consensus 88 ~i~GDl~~~~LGLs~~~~~~~l~~~vD~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~k~~V~vST~~vyG~ 167 (491)
T PLN02996 88 PVPGDISYDDLGVKDSNLREEMWKEIDIVVNLAATTNFDERYDVALGINTLGALNVLNFAKKCVKVKMLLHVSTAYVCGE 167 (491)
T ss_pred EEecccCCcCCCCChHHHHHHHHhCCCEEEECccccCCcCCHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeeeEEecC
Confidence 999999843 3 2 45578999999998866432211 12334456778877764 7899999999999986
Q ss_pred CCCc----cccCCC-----------------------------------------------CCCCCChhHHHHHHHHHHH
Q 017914 172 SGGA----WVDEDY-----------------------------------------------PANPTTELGRLRLSAEKGW 200 (364)
Q Consensus 172 ~~~~----~~~E~~-----------------------------------------------~~~~~~~Y~~sK~~~E~~~ 200 (364)
..+. ++.+.. ...+.+.|+.+|..+|+++
T Consensus 168 ~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pn~Y~~TK~~aE~lv 247 (491)
T PLN02996 168 KSGLILEKPFHMGETLNGNRKLDINEEKKLVKEKLKELNEQDASEEEITQAMKDLGMERAKLHGWPNTYVFTKAMGEMLL 247 (491)
T ss_pred CCceeeeecCCCcccccccccCChHHHHHHHHHHHHHHHhhcCCHHHHHHHhhhhchhHHHhCCCCCchHhhHHHHHHHH
Confidence 4321 111000 1123467999999999999
Q ss_pred HHhhhhcCCcEEEEEecceecCCCChHHHH----------HHhcCcc-cccccccCCcccccccHHHHHHHHHHHccCC-
Q 017914 201 LNLGRDLGISAQVFRLGGIYGPGRSSVDTI----------IKQLPLS-EGQKMRRARQYTSRIHVDDICQVLSASIDKP- 268 (364)
Q Consensus 201 ~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~----------~~~~~~~-~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~- 268 (364)
.++. .+++++++||+++||+.+.++..+ +.....+ ....++++++.+|+|||+|++++++.++.+.
T Consensus 248 ~~~~--~~lpv~i~RP~~V~G~~~~p~~gwi~~~~~~~~i~~~~~~g~~~~~~gdg~~~~D~v~Vddvv~a~l~a~~~~~ 325 (491)
T PLN02996 248 GNFK--ENLPLVIIRPTMITSTYKEPFPGWIEGLRTIDSVIVGYGKGKLTCFLADPNSVLDVIPADMVVNAMIVAMAAHA 325 (491)
T ss_pred HHhc--CCCCEEEECCCEeccCCcCCCCCcccchhhHHHHHHHhccceEeEEecCCCeecceecccHHHHHHHHHHHHhh
Confidence 8875 389999999999999876543221 1111111 1123477899999999999999999998753
Q ss_pred ---CCCceEEEeCC--CCCCHHHHHHHHHHHhcCC
Q 017914 269 ---SAWNVYNVVDD--DPAPREEVFAYAWDLVEKK 298 (364)
Q Consensus 269 ---~~g~~~~i~~~--~~~s~~el~~~i~~~~g~~ 298 (364)
..+++||++++ +++|+.|+++.+.+.++..
T Consensus 326 ~~~~~~~vYNi~s~~~~~~s~~ei~~~~~~~~~~~ 360 (491)
T PLN02996 326 GGQGSEIIYHVGSSLKNPVKFSNLHDFAYRYFSKN 360 (491)
T ss_pred ccCCCCcEEEecCCCCCcccHHHHHHHHHHHhhhC
Confidence 23679999998 8899999999999998765
|
|
| >PLN02778 3,5-epimerase/4-reductase | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.2e-26 Score=207.04 Aligned_cols=265 Identities=12% Similarity=0.123 Sum_probs=176.8
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCChhhH--Hhh--ccCceeeEEEEec
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETAL--MIL--TTLKNYTHLLVSI 131 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~--~~~--~~~d~v~~~~~~~ 131 (364)
...|+||||| +||||++|+++|+++|++|+...+ |+.|.+. ..+ .++|+|+|+|+..
T Consensus 7 ~~~~kiLVtG~tGfiG~~l~~~L~~~g~~V~~~~~------------------~~~~~~~v~~~l~~~~~D~ViH~Aa~~ 68 (298)
T PLN02778 7 SATLKFLIYGKTGWIGGLLGKLCQEQGIDFHYGSG------------------RLENRASLEADIDAVKPTHVFNAAGVT 68 (298)
T ss_pred CCCCeEEEECCCCHHHHHHHHHHHhCCCEEEEecC------------------ccCCHHHHHHHHHhcCCCEEEECCccc
Confidence 3458999999 999999999999999999975432 2222221 223 2689999999876
Q ss_pred CCCC---CCCChh------hhHHHHHHHHhhcCCccEEEEEccceeecCCC------CccccCCCCCC-CCChhHHHHHH
Q 017914 132 PPLE---GTGDPM------LKHGELLRSTLMNGHLQWLGYLSSTGVYGHSG------GAWVDEDYPAN-PTTELGRLRLS 195 (364)
Q Consensus 132 ~~~~---~~~~~~------~~~~~~l~~a~~~~~~~r~v~~Ss~~vy~~~~------~~~~~E~~~~~-~~~~Y~~sK~~ 195 (364)
.... ...++. .....|++++|++.+++ ++++||..+|+... +.+++|+++.. +.+.|+.+|.+
T Consensus 69 ~~~~~~~~~~~p~~~~~~Nv~gt~~ll~aa~~~gv~-~v~~sS~~vy~~~~~~p~~~~~~~~Ee~~p~~~~s~Yg~sK~~ 147 (298)
T PLN02778 69 GRPNVDWCESHKVETIRANVVGTLTLADVCRERGLV-LTNYATGCIFEYDDAHPLGSGIGFKEEDTPNFTGSFYSKTKAM 147 (298)
T ss_pred CCCCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCC-EEEEecceEeCCCCCCCcccCCCCCcCCCCCCCCCchHHHHHH
Confidence 4321 112222 23456888889888886 55667778886432 22467666554 45899999999
Q ss_pred HHHHHHHhhhhcCCcEEEEEecceecCCCCh----HHHHHHhcCcccccccccCCcccccccHHHHHHHHHHHccCCCCC
Q 017914 196 AEKGWLNLGRDLGISAQVFRLGGIYGPGRSS----VDTIIKQLPLSEGQKMRRARQYTSRIHVDDICQVLSASIDKPSAW 271 (364)
Q Consensus 196 ~E~~~~~~~~~~~~~~~ilRp~~v~g~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~~g 271 (364)
+|.++..+. +..++|++..+|.+... +..+.....+. . ...+|+|++|++++++.++++...
T Consensus 148 ~E~~~~~y~-----~~~~lr~~~~~~~~~~~~~~fi~~~~~~~~~~-----~---~~~s~~yv~D~v~al~~~l~~~~~- 213 (298)
T PLN02778 148 VEELLKNYE-----NVCTLRVRMPISSDLSNPRNFITKITRYEKVV-----N---IPNSMTILDELLPISIEMAKRNLT- 213 (298)
T ss_pred HHHHHHHhh-----ccEEeeecccCCcccccHHHHHHHHHcCCCee-----E---cCCCCEEHHHHHHHHHHHHhCCCC-
Confidence 999998775 35788888777765322 22222221111 1 113689999999999999976543
Q ss_pred ceEEEeCCCCCCHHHHHHHHHHHhcCCCCCcccCCCCCCCCCCCccCCCCCCCeEEEchhHHHhcCcccCCCCHHHHHHH
Q 017914 272 NVYNVVDDDPAPREEVFAYAWDLVEKKWPGLLKHRKPRENTESSNEKGSSRGEKRVSNVRMKKELGVRLWHPSYKSGLQS 351 (364)
Q Consensus 272 ~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~e~l~~ 351 (364)
++||+++++.+|+.|+++.+++.+|.+.. +..+... ......-.......+|++|+++.++=.+. ..+++++.
T Consensus 214 g~yNigs~~~iS~~el~~~i~~~~~~~~~-~~~~~i~----~~~~~~~~~~~~~~Ld~~k~~~~~~~~~~--~~~~~~~~ 286 (298)
T PLN02778 214 GIYNFTNPGVVSHNEILEMYRDYIDPSFT-WKNFTLE----EQAKVIVAPRSNNELDTTKLKREFPELLP--IKESLIKY 286 (298)
T ss_pred CeEEeCCCCcccHHHHHHHHHHHhCCCce-eccccHH----HHHHHHhCCCccccccHHHHHHhcccccc--hHHHHHHH
Confidence 59999999999999999999999986421 0111000 00000000111126999999998875443 67999999
Q ss_pred HHHHhcccCC
Q 017914 352 IINQMDQPYQ 361 (364)
Q Consensus 352 ~~~~~~~~~~ 361 (364)
.++.++++..
T Consensus 287 ~~~~~~~~~~ 296 (298)
T PLN02778 287 VFEPNKKTKK 296 (298)
T ss_pred HHHHHHhhhc
Confidence 9998876654
|
|
| >PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase | Back alignment and domain information |
|---|
Probab=99.95 E-value=7.4e-27 Score=215.60 Aligned_cols=224 Identities=13% Similarity=0.131 Sum_probs=168.2
Q ss_pred CCCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhh------hh--hhCCceEEEccCChhhH--Hhhc----c
Q 017914 56 WQSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKK------EL--EQSGFDVHLFNANETAL--MILT----T 120 (364)
Q Consensus 56 ~~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~------~l--~~~~~~~~~~D~~~~~~--~~~~----~ 120 (364)
...+|+||||| ||+||++++++|+++|++|++++|+..+.. .. ...+++++.+|++|++. ..++ +
T Consensus 57 ~~~~~kVLVtGatG~IG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~~~~~~~~~~ 136 (390)
T PLN02657 57 EPKDVTVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDVTDADSLRKVLFSEGDP 136 (390)
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEechhhccccchhhHHhhhcCCceEEEeeCCCHHHHHHHHHHhCCC
Confidence 35568999999 999999999999999999999999865421 11 12478999999999774 4555 5
Q ss_pred CceeeEEEEecCCC-CCCCChhhhHHHHHHHHhhcCCccEEEEEccceeecCCCCccccCCCCCCCCChhHHHHHHHHHH
Q 017914 121 LKNYTHLLVSIPPL-EGTGDPMLKHGELLRSTLMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANPTTELGRLRLSAEKG 199 (364)
Q Consensus 121 ~d~v~~~~~~~~~~-~~~~~~~~~~~~~l~~a~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~~sK~~~E~~ 199 (364)
+|+|+|+++..... ....+.......|+++++++.++++||++||.++|+ |...|..+|...|+.
T Consensus 137 ~D~Vi~~aa~~~~~~~~~~~vn~~~~~~ll~aa~~~gv~r~V~iSS~~v~~--------------p~~~~~~sK~~~E~~ 202 (390)
T PLN02657 137 VDVVVSCLASRTGGVKDSWKIDYQATKNSLDAGREVGAKHFVLLSAICVQK--------------PLLEFQRAKLKFEAE 202 (390)
T ss_pred CcEEEECCccCCCCCccchhhHHHHHHHHHHHHHHcCCCEEEEEeeccccC--------------cchHHHHHHHHHHHH
Confidence 89999987643211 111122334567899999999999999999987652 335688999999998
Q ss_pred HHHhhhhcCCcEEEEEecceecCCCChHHHHHHhcCcccccccccCCccc-ccccHHHHHHHHHHHccCC-CCCceEEEe
Q 017914 200 WLNLGRDLGISAQVFRLGGIYGPGRSSVDTIIKQLPLSEGQKMRRARQYT-SRIHVDDICQVLSASIDKP-SAWNVYNVV 277 (364)
Q Consensus 200 ~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~v~Dva~~~~~~l~~~-~~g~~~~i~ 277 (364)
+++ ...+++++|+||+.+||.....+..+..+.++ ...++++..+ ++||++|+|++++.++.++ ..+++||++
T Consensus 203 l~~--~~~gl~~tIlRp~~~~~~~~~~~~~~~~g~~~---~~~GdG~~~~~~~I~v~DlA~~i~~~~~~~~~~~~~~~Ig 277 (390)
T PLN02657 203 LQA--LDSDFTYSIVRPTAFFKSLGGQVEIVKDGGPY---VMFGDGKLCACKPISEADLASFIADCVLDESKINKVLPIG 277 (390)
T ss_pred HHh--ccCCCCEEEEccHHHhcccHHHHHhhccCCce---EEecCCcccccCceeHHHHHHHHHHHHhCccccCCEEEcC
Confidence 875 34689999999999998643333332222211 1235565544 5799999999999999765 347899999
Q ss_pred CC-CCCCHHHHHHHHHHHhcCC
Q 017914 278 DD-DPAPREEVFAYAWDLVEKK 298 (364)
Q Consensus 278 ~~-~~~s~~el~~~i~~~~g~~ 298 (364)
++ +.+|++|+++++.+.+|++
T Consensus 278 gp~~~~S~~Eia~~l~~~lG~~ 299 (390)
T PLN02657 278 GPGKALTPLEQGEMLFRILGKE 299 (390)
T ss_pred CCCcccCHHHHHHHHHHHhCCC
Confidence 86 6899999999999999987
|
|
| >TIGR01746 Thioester-redct thioester reductase domain | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.1e-25 Score=207.75 Aligned_cols=234 Identities=17% Similarity=0.175 Sum_probs=170.4
Q ss_pred eEEEEc-CChhhHHHHHHHHhCC--CEEEEEEeCchhhh---hhh--------------hCCceEEEccCChhh------
Q 017914 61 RMLILG-MGFVGRIFAEKIKNQG--WVVSGTCTNVMKKK---ELE--------------QSGFDVHLFNANETA------ 114 (364)
Q Consensus 61 ~vlVtG-tG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~---~l~--------------~~~~~~~~~D~~~~~------ 114 (364)
+||||| |||||++|+++|+++| ++|++++|+..... .+. ..+++++.+|++++.
T Consensus 1 ~vlvtGatG~lG~~l~~~L~~~g~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~gl~~~ 80 (367)
T TIGR01746 1 TVLLTGATGFLGAYLLEELLRRSTQAKVICLVRAASEEHAMERLREALRSYRLWQEDLARERIEVVAGDLSEPRLGLSDA 80 (367)
T ss_pred CEEEeccchHHHHHHHHHHHhCCCCCEEEEEEccCCHHHHHHHHHHHHHHhCCCCchhhhCCEEEEeCCcCcccCCcCHH
Confidence 589999 9999999999999998 67999999765321 110 046889999987642
Q ss_pred -H-HhhccCceeeEEEEecCCCCCC---CChhhhHHHHHHHHhhcCCccEEEEEccceeecCCCCccccCCCCC-----C
Q 017914 115 -L-MILTTLKNYTHLLVSIPPLEGT---GDPMLKHGELLRSTLMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPA-----N 184 (364)
Q Consensus 115 -~-~~~~~~d~v~~~~~~~~~~~~~---~~~~~~~~~~l~~a~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~-----~ 184 (364)
+ ....++|.|+|+++.......+ .........++++++...++++|||+||.++|+.....+..|+.+. .
T Consensus 81 ~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~nv~g~~~ll~~a~~~~~~~~v~iSS~~v~~~~~~~~~~~~~~~~~~~~~ 160 (367)
T TIGR01746 81 EWERLAENVDTIVHNGALVNWVYPYSELRAANVLGTREVLRLAASGRAKPLHYVSTISVLAAIDLSTVTEDDAIVTPPPG 160 (367)
T ss_pred HHHHHHhhCCEEEeCCcEeccCCcHHHHhhhhhHHHHHHHHHHhhCCCceEEEEccccccCCcCCCCccccccccccccc
Confidence 2 4457899999999876532221 1233455678888888888889999999999976433333343322 2
Q ss_pred CCChhHHHHHHHHHHHHHhhhhcCCcEEEEEecceecCCCC-------hHHHHHHh-cCcccccccccCC-cccccccHH
Q 017914 185 PTTELGRLRLSAEKGWLNLGRDLGISAQVFRLGGIYGPGRS-------SVDTIIKQ-LPLSEGQKMRRAR-QYTSRIHVD 255 (364)
Q Consensus 185 ~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilRp~~v~g~~~~-------~~~~~~~~-~~~~~~~~~~~~~-~~~~~i~v~ 255 (364)
+.+.|+.+|+.+|.+++++.+. |++++++|||.++|+... .+..+... .... ...... ...+|+|++
T Consensus 161 ~~~~Y~~sK~~~E~~~~~~~~~-g~~~~i~Rpg~v~G~~~~g~~~~~~~~~~~~~~~~~~~---~~p~~~~~~~~~~~vd 236 (367)
T TIGR01746 161 LAGGYAQSKWVAELLVREASDR-GLPVTIVRPGRILGNSYTGAINSSDILWRMVKGCLALG---AYPDSPELTEDLTPVD 236 (367)
T ss_pred cCCChHHHHHHHHHHHHHHHhc-CCCEEEECCCceeecCCCCCCCchhHHHHHHHHHHHhC---CCCCCCccccCcccHH
Confidence 3468999999999999887654 999999999999997321 22222221 1111 111222 357899999
Q ss_pred HHHHHHHHHccCCCC---CceEEEeCCCCCCHHHHHHHHHHHhcCCC
Q 017914 256 DICQVLSASIDKPSA---WNVYNVVDDDPAPREEVFAYAWDLVEKKW 299 (364)
Q Consensus 256 Dva~~~~~~l~~~~~---g~~~~i~~~~~~s~~el~~~i~~~~g~~~ 299 (364)
|+|++++.++..+.. +++||++++++++++|+++.+.+ .|.+.
T Consensus 237 dva~ai~~~~~~~~~~~~~~~~~v~~~~~~s~~e~~~~i~~-~g~~~ 282 (367)
T TIGR01746 237 YVARAIVALSSQPAASAGGPVFHVVNPEPVSLDEFLEWLER-AGYNL 282 (367)
T ss_pred HHHHHHHHHHhCCCcccCCceEEecCCCCCCHHHHHHHHHH-cCCCC
Confidence 999999999887653 78999999999999999999999 77764
|
It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold. |
| >TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.6e-25 Score=198.05 Aligned_cols=257 Identities=11% Similarity=0.031 Sum_probs=172.2
Q ss_pred eEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCChhhH--Hhh------cc-CceeeEEEEe
Q 017914 61 RMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETAL--MIL------TT-LKNYTHLLVS 130 (364)
Q Consensus 61 ~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~--~~~------~~-~d~v~~~~~~ 130 (364)
+||||| ||++|++++++|+++|++|++++|++++.. ..+++.+.+|++|++. .++ .+ +|.|+|+...
T Consensus 1 ~ilVtGatG~iG~~vv~~L~~~g~~V~~~~R~~~~~~---~~~~~~~~~d~~d~~~l~~a~~~~~~~~g~~d~v~~~~~~ 77 (285)
T TIGR03649 1 TILLTGGTGKTASRIARLLQAASVPFLVASRSSSSSA---GPNEKHVKFDWLDEDTWDNPFSSDDGMEPEISAVYLVAPP 77 (285)
T ss_pred CEEEEcCCChHHHHHHHHHHhCCCcEEEEeCCCcccc---CCCCccccccCCCHHHHHHHHhcccCcCCceeEEEEeCCC
Confidence 589999 999999999999999999999999876543 2577888999999774 555 45 8888887642
Q ss_pred cCCCCCCCChhhhHHHHHHHHhhcCCccEEEEEccceeecCCCCccccCCCCCCCCChhHHHHHHHHHHHHHhhhhcCCc
Q 017914 131 IPPLEGTGDPMLKHGELLRSTLMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANPTTELGRLRLSAEKGWLNLGRDLGIS 210 (364)
Q Consensus 131 ~~~~~~~~~~~~~~~~~l~~a~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~ 210 (364)
.. + ......++++++++.|++|||++||.+++.. ...+...|+++++ ..+++
T Consensus 78 ~~------~-~~~~~~~~i~aa~~~gv~~~V~~Ss~~~~~~------------------~~~~~~~~~~l~~---~~gi~ 129 (285)
T TIGR03649 78 IP------D-LAPPMIKFIDFARSKGVRRFVLLSASIIEKG------------------GPAMGQVHAHLDS---LGGVE 129 (285)
T ss_pred CC------C-hhHHHHHHHHHHHHcCCCEEEEeeccccCCC------------------CchHHHHHHHHHh---ccCCC
Confidence 11 1 1234568899999999999999998654311 0122344555442 24899
Q ss_pred EEEEEecceecCCCChHHHHHHhcCcccc-cccccCCcccccccHHHHHHHHHHHccCCC-CCceEEEeCCCCCCHHHHH
Q 017914 211 AQVFRLGGIYGPGRSSVDTIIKQLPLSEG-QKMRRARQYTSRIHVDDICQVLSASIDKPS-AWNVYNVVDDDPAPREEVF 288 (364)
Q Consensus 211 ~~ilRp~~v~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~-~g~~~~i~~~~~~s~~el~ 288 (364)
++++||+++++...... ...... ..+ ...+.++..++||+++|+|+++..++..+. .++.|++++++.+|+.|++
T Consensus 130 ~tilRp~~f~~~~~~~~--~~~~~~-~~~~~~~~~g~~~~~~v~~~Dva~~~~~~l~~~~~~~~~~~l~g~~~~s~~eia 206 (285)
T TIGR03649 130 YTVLRPTWFMENFSEEF--HVEAIR-KENKIYSATGDGKIPFVSADDIARVAYRALTDKVAPNTDYVVLGPELLTYDDVA 206 (285)
T ss_pred EEEEeccHHhhhhcccc--cccccc-cCCeEEecCCCCccCcccHHHHHHHHHHHhcCCCcCCCeEEeeCCccCCHHHHH
Confidence 99999998886431110 000000 011 112346778899999999999999998864 4789999999999999999
Q ss_pred HHHHHHhcCCCCCcccCCCC------CCCCCCCc----cCC----CCCCCeEEEchhHHHhcCcccCCCCHHHHHHHHHH
Q 017914 289 AYAWDLVEKKWPGLLKHRKP------RENTESSN----EKG----SSRGEKRVSNVRMKKELGVRLWHPSYKSGLQSIIN 354 (364)
Q Consensus 289 ~~i~~~~g~~~~~~~~~~~~------~~~~~~~~----~~~----~~~~~~~~d~~k~~~~lG~~p~~~~~~e~l~~~~~ 354 (364)
+.+.+.+|++++.. ..+.. ........ +.. .........+...++.+|.+|+ +|+|.+++...
T Consensus 207 ~~l~~~~g~~v~~~-~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~G~~p~--~~~~~~~~~~~ 283 (285)
T TIGR03649 207 EILSRVLGRKITHV-KLTEEELAQRLQSFGMPEDLARMLASLDTAVKNGAEVRLNDVVKAVTGSKPR--GFRDFAESNKA 283 (285)
T ss_pred HHHHHHhCCceEEE-eCCHHHHHHHHHHcCCCHHHHHHHHHHHHHHhCCccccccchHHHHhCcCCc--cHHHHHHHhhh
Confidence 99999999984321 11000 00000000 000 0111112235666677999998 79998887654
|
This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi. |
| >PRK12320 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.5e-23 Score=201.88 Aligned_cols=229 Identities=14% Similarity=0.107 Sum_probs=160.8
Q ss_pred CeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCChhhH-HhhccCceeeEEEEecCCCCCC
Q 017914 60 NRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETAL-MILTTLKNYTHLLVSIPPLEGT 137 (364)
Q Consensus 60 ~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~-~~~~~~d~v~~~~~~~~~~~~~ 137 (364)
|+||||| +||||++|+++|+++||+|++++|..... ...+++++.+|++++.+ ..+.++|.|+|+++..... .
T Consensus 1 MkILVTGAaGFIGs~La~~Ll~~G~~Vi~ldr~~~~~---~~~~ve~v~~Dl~d~~l~~al~~~D~VIHLAa~~~~~--~ 75 (699)
T PRK12320 1 MQILVTDATGAVGRSVTRQLIAAGHTVSGIAQHPHDA---LDPRVDYVCASLRNPVLQELAGEADAVIHLAPVDTSA--P 75 (699)
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCEEEEEeCChhhc---ccCCceEEEccCCCHHHHHHhcCCCEEEEcCccCccc--h
Confidence 5899999 99999999999999999999999975432 12468899999999765 5667899999999753211 1
Q ss_pred CChhhhHHHHHHHHhhcCCccEEEEEccceeecCCCCccccCCCCCCCCChhHHHHHHHHHHHHHhhhhcCCcEEEEEec
Q 017914 138 GDPMLKHGELLRSTLMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANPTTELGRLRLSAEKGWLNLGRDLGISAQVFRLG 217 (364)
Q Consensus 138 ~~~~~~~~~~l~~a~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilRp~ 217 (364)
.........|+++++++.++ ++||+||. +|.. ..|. .+|.++.. ++++++++|++
T Consensus 76 ~~vNv~Gt~nLleAA~~~Gv-RiV~~SS~--~G~~--------------~~~~----~aE~ll~~----~~~p~~ILR~~ 130 (699)
T PRK12320 76 GGVGITGLAHVANAAARAGA-RLLFVSQA--AGRP--------------ELYR----QAETLVST----GWAPSLVIRIA 130 (699)
T ss_pred hhHHHHHHHHHHHHHHHcCC-eEEEEECC--CCCC--------------cccc----HHHHHHHh----cCCCEEEEeCc
Confidence 12344567899999998887 69999975 3321 0122 46776653 46899999999
Q ss_pred ceecCCCCh-----HHHHHHhcCcccccccccCCcccccccHHHHHHHHHHHccCCCCCceEEEeCCCCCCHHHHHHHHH
Q 017914 218 GIYGPGRSS-----VDTIIKQLPLSEGQKMRRARQYTSRIHVDDICQVLSASIDKPSAWNVYNVVDDDPAPREEVFAYAW 292 (364)
Q Consensus 218 ~v~g~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~~g~~~~i~~~~~~s~~el~~~i~ 292 (364)
++||+.... +..++... ...+...+||++|++++++.+++.+..| +||+++|+.+|+.|+++.+.
T Consensus 131 nVYGp~~~~~~~r~I~~~l~~~---------~~~~pI~vIyVdDvv~alv~al~~~~~G-iyNIG~~~~~Si~el~~~i~ 200 (699)
T PRK12320 131 PPVGRQLDWMVCRTVATLLRSK---------VSARPIRVLHLDDLVRFLVLALNTDRNG-VVDLATPDTTNVVTAWRLLR 200 (699)
T ss_pred eecCCCCcccHhHHHHHHHHHH---------HcCCceEEEEHHHHHHHHHHHHhCCCCC-EEEEeCCCeeEHHHHHHHHH
Confidence 999986432 22222211 0123345689999999999999875545 99999999999999988886
Q ss_pred HHhcCCCCCcccCCCCCCCCCCCccCCCCCCCeEEEchhHHHhcCcccCCCCH
Q 017914 293 DLVEKKWPGLLKHRKPRENTESSNEKGSSRGEKRVSNVRMKKELGVRLWHPSY 345 (364)
Q Consensus 293 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~ 345 (364)
... |...+. .........-|...++..++|.|+. ++
T Consensus 201 ~~~----p~~~~~------------~~~~~~~~~pdi~~a~~~~~w~~~~-~~ 236 (699)
T PRK12320 201 SVD----PHLRTR------------RVRSWEQLIPEVDIAAVQEDWNFEF-GW 236 (699)
T ss_pred HhC----CCcccc------------ccccHHHhCCCCchhhhhcCCCCcc-hH
Confidence 652 211111 0011122233566666678999987 55
|
|
| >KOG1372 consensus GDP-mannose 4,6 dehydratase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.92 E-value=8.2e-24 Score=172.50 Aligned_cols=301 Identities=13% Similarity=0.128 Sum_probs=205.5
Q ss_pred CCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchh-----hhhhh-------hCCceEEEccCChhhH--Hhhc--cC
Q 017914 59 PNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMK-----KKELE-------QSGFDVHLFNANETAL--MILT--TL 121 (364)
Q Consensus 59 ~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~-----~~~l~-------~~~~~~~~~D~~~~~~--~~~~--~~ 121 (364)
.+..|||| ||.=|++|++.|+.+||+|+++.|+.+. .+++- ......+.+|++|... +.+. ..
T Consensus 28 rkvALITGItGQDGSYLaEfLL~KgYeVHGiiRRsSsFNT~RIeHlY~nP~~h~~~~mkLHYgDmTDss~L~k~I~~ikP 107 (376)
T KOG1372|consen 28 RKVALITGITGQDGSYLAEFLLSKGYEVHGIIRRSSSFNTARIEHLYSNPHTHNGASMKLHYGDMTDSSCLIKLISTIKP 107 (376)
T ss_pred ceEEEEecccCCCchHHHHHHHhCCceeeEEEeeccccchhhhhhhhcCchhcccceeEEeeccccchHHHHHHHhccCc
Confidence 35688889 9999999999999999999999986543 22221 1456889999999764 4443 45
Q ss_pred ceeeEEEEecCCCCCCC------ChhhhHHHHHHHHhhcCCc---cEEEEEccceeecCCCCccccCCCCCCCCChhHHH
Q 017914 122 KNYTHLLVSIPPLEGTG------DPMLKHGELLRSTLMNGHL---QWLGYLSSTGVYGHSGGAWVDEDYPANPTTELGRL 192 (364)
Q Consensus 122 d~v~~~~~~~~~~~~~~------~~~~~~~~~l~~a~~~~~~---~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~~s 192 (364)
+-|+|+++..+..-+++ +....++-.++++.+..+. -||...||...||.....|..|.+|+.|.++|+.+
T Consensus 108 tEiYnLaAQSHVkvSFdlpeYTAeVdavGtLRlLdAi~~c~l~~~VrfYQAstSElyGkv~e~PQsE~TPFyPRSPYa~a 187 (376)
T KOG1372|consen 108 TEVYNLAAQSHVKVSFDLPEYTAEVDAVGTLRLLDAIRACRLTEKVRFYQASTSELYGKVQEIPQSETTPFYPRSPYAAA 187 (376)
T ss_pred hhhhhhhhhcceEEEeecccceeeccchhhhhHHHHHHhcCcccceeEEecccHhhcccccCCCcccCCCCCCCChhHHh
Confidence 78888887765543332 2222344567777764322 36889999999998888899999999999999999
Q ss_pred HHHHHHHHHHhhhhcCCcEEEEEecceec---CC--CChHHH-HHHh---cCcc--cccccccCCcccccccHHHHHHHH
Q 017914 193 RLSAEKGWLNLGRDLGISAQVFRLGGIYG---PG--RSSVDT-IIKQ---LPLS--EGQKMRRARQYTSRIHVDDICQVL 261 (364)
Q Consensus 193 K~~~E~~~~~~~~~~~~~~~ilRp~~v~g---~~--~~~~~~-~~~~---~~~~--~~~~~~~~~~~~~~i~v~Dva~~~ 261 (364)
|..+--++.+|.+.+++-.+ -|.+|. |. .+++.+ +.+. ..++ ....+|+-...+||=|..|-++++
T Consensus 188 Kmy~~WivvNyREAYnmfAc---NGILFNHESPRRGenFVTRKItRsvakI~~gqqe~~~LGNL~a~RDWGhA~dYVEAM 264 (376)
T KOG1372|consen 188 KMYGYWIVVNYREAYNMFAC---NGILFNHESPRRGENFVTRKITRSVAKISLGQQEKIELGNLSALRDWGHAGDYVEAM 264 (376)
T ss_pred hhhheEEEEEhHHhhcceee---ccEeecCCCCccccchhhHHHHHHHHHhhhcceeeEEecchhhhcccchhHHHHHHH
Confidence 98876666666665554332 133333 22 234322 2221 1122 122346667889999999999999
Q ss_pred HHHccCCCCCceEEEeCCCCCCHHHHHHHHHHHhcCCCCCc------ccCCCC---CCCCCCCccCCCCCCCeEEEchhH
Q 017914 262 SASIDKPSAWNVYNVVDDDPAPREEVFAYAWDLVEKKWPGL------LKHRKP---RENTESSNEKGSSRGEKRVSNVRM 332 (364)
Q Consensus 262 ~~~l~~~~~g~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~------~~~~~~---~~~~~~~~~~~~~~~~~~~d~~k~ 332 (364)
+.+|+++.+. .|-++.|+..|.+|+++......|..+... ...... +-.....+..+.......-|.+|+
T Consensus 265 W~mLQ~d~Pd-DfViATge~hsVrEF~~~aF~~ig~~l~Weg~gv~~~~~n~~g~v~V~v~~kYyRPtEVd~LqGdasKA 343 (376)
T KOG1372|consen 265 WLMLQQDSPD-DFVIATGEQHSVREFCNLAFAEIGEVLNWEGEGVDEVGKNDDGVVRVKVDPKYYRPTEVDTLQGDASKA 343 (376)
T ss_pred HHHHhcCCCC-ceEEecCCcccHHHHHHHHHHhhCcEEeecccccccccccCCceEEEEecccccCcchhhhhcCChHHH
Confidence 9999998775 799999999999999999988888542110 000000 000111222233333345689999
Q ss_pred HHhcCcccCCCCHHHHHHHHHHHhcccCCCCC
Q 017914 333 KKELGVRLWHPSYKSGLQSIINQMDQPYQCSP 364 (364)
Q Consensus 333 ~~~lG~~p~~~~~~e~l~~~~~~~~~~~~~~~ 364 (364)
++.|||+|+. ++.|.+++++..=.+-++.+|
T Consensus 344 k~~LgW~pkv-~f~eLVkeMv~~DieLm~~np 374 (376)
T KOG1372|consen 344 KKTLGWKPKV-TFPELVKEMVASDIELMKRNP 374 (376)
T ss_pred HHhhCCCCcc-CHHHHHHHHHHhHHHHHhhCC
Confidence 9999999999 899999999886555444443
|
|
| >PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases | Back alignment and domain information |
|---|
Probab=99.92 E-value=4e-24 Score=183.99 Aligned_cols=223 Identities=13% Similarity=0.102 Sum_probs=161.2
Q ss_pred EEEEc-CChhhHHHHHHHHhCC-CEEEEEEeCchhhhhhhh--------CCce----EEEccCChhhH--Hhhc--cCce
Q 017914 62 MLILG-MGFVGRIFAEKIKNQG-WVVSGTCTNVMKKKELEQ--------SGFD----VHLFNANETAL--MILT--TLKN 123 (364)
Q Consensus 62 vlVtG-tG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~l~~--------~~~~----~~~~D~~~~~~--~~~~--~~d~ 123 (364)
||||| +|.||+.|+++|++.+ .++++++|+......+.. .++. .+.+|+.|.+. .+++ ++|.
T Consensus 1 VLVTGa~GSIGseL~rql~~~~p~~lil~d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vigDvrd~~~l~~~~~~~~pdi 80 (293)
T PF02719_consen 1 VLVTGAGGSIGSELVRQLLRYGPKKLILFDRDENKLYELERELRSRFPDPKVRFEIVPVIGDVRDKERLNRIFEEYKPDI 80 (293)
T ss_dssp EEEETTTSHHHHHHHHHHHCCB-SEEEEEES-HHHHHHHHHHCHHHC--TTCEEEEE--CTSCCHHHHHHHHTT--T-SE
T ss_pred CEEEccccHHHHHHHHHHHhcCCCeEEEeCCChhHHHHHHHHHhhcccccCcccccCceeecccCHHHHHHHHhhcCCCE
Confidence 79998 9999999999999998 589999998776544331 2343 35799999875 5666 8999
Q ss_pred eeEEEEecCCCCCCCChhh------hHHHHHHHHhhcCCccEEEEEccceeecCCCCccccCCCCCCCCChhHHHHHHHH
Q 017914 124 YTHLLVSIPPLEGTGDPML------KHGELLRSTLMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANPTTELGRLRLSAE 197 (364)
Q Consensus 124 v~~~~~~~~~~~~~~~~~~------~~~~~l~~a~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~~sK~~~E 197 (364)
|+|.|+.-+..-....+.. .++.|+++++...++++||++||.-+ .+|.+.||.||+.+|
T Consensus 81 VfHaAA~KhVpl~E~~p~eav~tNv~GT~nv~~aa~~~~v~~~v~ISTDKA--------------v~PtnvmGatKrlaE 146 (293)
T PF02719_consen 81 VFHAAALKHVPLMEDNPFEAVKTNVLGTQNVAEAAIEHGVERFVFISTDKA--------------VNPTNVMGATKRLAE 146 (293)
T ss_dssp EEE------HHHHCCCHHHHHHHHCHHHHHHHHHHHHTT-SEEEEEEECGC--------------SS--SHHHHHHHHHH
T ss_pred EEEChhcCCCChHHhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEcccccc--------------CCCCcHHHHHHHHHH
Confidence 9999986443222223333 44568888888999999999999532 347799999999999
Q ss_pred HHHHHhhhhc---CCcEEEEEecceecCCCChHHHHHHhcCcccccccccCCcccccccHHHHHHHHHHHccCCCCCceE
Q 017914 198 KGWLNLGRDL---GISAQVFRLGGIYGPGRSSVDTIIKQLPLSEGQKMRRARQYTSRIHVDDICQVLSASIDKPSAWNVY 274 (364)
Q Consensus 198 ~~~~~~~~~~---~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~~g~~~ 274 (364)
+++..++... +..++++|.|+|.|..+..++.+.++..-+..-.+.+++..|-|+.+++.++.++.+......|++|
T Consensus 147 ~l~~~~~~~~~~~~t~f~~VRFGNVlgS~GSVip~F~~Qi~~g~PlTvT~p~mtRffmti~EAv~Lvl~a~~~~~~geif 226 (293)
T PF02719_consen 147 KLVQAANQYSGNSDTKFSSVRFGNVLGSRGSVIPLFKKQIKNGGPLTVTDPDMTRFFMTIEEAVQLVLQAAALAKGGEIF 226 (293)
T ss_dssp HHHHHHCCTSSSS--EEEEEEE-EETTGTTSCHHHHHHHHHTTSSEEECETT-EEEEE-HHHHHHHHHHHHHH--TTEEE
T ss_pred HHHHHHhhhCCCCCcEEEEEEecceecCCCcHHHHHHHHHHcCCcceeCCCCcEEEEecHHHHHHHHHHHHhhCCCCcEE
Confidence 9999987655 6899999999999999888877777644443344556778899999999999999999988889999
Q ss_pred EEeCCCCCCHHHHHHHHHHHhcCC
Q 017914 275 NVVDDDPAPREEVFAYAWDLVEKK 298 (364)
Q Consensus 275 ~i~~~~~~s~~el~~~i~~~~g~~ 298 (364)
.+--|+++++.|+++.+.+..|..
T Consensus 227 vl~mg~~v~I~dlA~~~i~~~g~~ 250 (293)
T PF02719_consen 227 VLDMGEPVKILDLAEAMIELSGLE 250 (293)
T ss_dssp EE---TCEECCCHHHHHHHHTT-E
T ss_pred EecCCCCcCHHHHHHHHHhhcccc
Confidence 999999999999999999999853
|
The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A. |
| >COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.92 E-value=6.9e-23 Score=187.23 Aligned_cols=229 Identities=13% Similarity=0.104 Sum_probs=188.0
Q ss_pred CCCCCeEEEEc-CChhhHHHHHHHHhCC-CEEEEEEeCchhhhhhh----h----CCceEEEccCChhhH--Hhhcc--C
Q 017914 56 WQSPNRMLILG-MGFVGRIFAEKIKNQG-WVVSGTCTNVMKKKELE----Q----SGFDVHLFNANETAL--MILTT--L 121 (364)
Q Consensus 56 ~~~~~~vlVtG-tG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~l~----~----~~~~~~~~D~~~~~~--~~~~~--~ 121 (364)
...+|+||||| +|-||+.+++++++.+ -+++.++|+.-+...+. + ..+.++.+|+.|.+. .++.+ +
T Consensus 247 ~~~gK~vLVTGagGSiGsel~~qil~~~p~~i~l~~~~E~~~~~i~~el~~~~~~~~~~~~igdVrD~~~~~~~~~~~kv 326 (588)
T COG1086 247 MLTGKTVLVTGGGGSIGSELCRQILKFNPKEIILFSRDEYKLYLIDMELREKFPELKLRFYIGDVRDRDRVERAMEGHKV 326 (588)
T ss_pred HcCCCEEEEeCCCCcHHHHHHHHHHhcCCCEEEEecCchHHHHHHHHHHHhhCCCcceEEEecccccHHHHHHHHhcCCC
Confidence 45689999998 9999999999999987 57888999876654332 2 567889999999885 67777 9
Q ss_pred ceeeEEEEecCCCCCCCChhh------hHHHHHHHHhhcCCccEEEEEccceeecCCCCccccCCCCCCCCChhHHHHHH
Q 017914 122 KNYTHLLVSIPPLEGTGDPML------KHGELLRSTLMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANPTTELGRLRLS 195 (364)
Q Consensus 122 d~v~~~~~~~~~~~~~~~~~~------~~~~~l~~a~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~~sK~~ 195 (364)
|.|+|.|+.-+..-...+|.+ .++.|++++|.+.++++||++||.- ..+|.+.||.+|..
T Consensus 327 d~VfHAAA~KHVPl~E~nP~Eai~tNV~GT~nv~~aa~~~~V~~~V~iSTDK--------------AV~PtNvmGaTKr~ 392 (588)
T COG1086 327 DIVFHAAALKHVPLVEYNPEEAIKTNVLGTENVAEAAIKNGVKKFVLISTDK--------------AVNPTNVMGATKRL 392 (588)
T ss_pred ceEEEhhhhccCcchhcCHHHHHHHhhHhHHHHHHHHHHhCCCEEEEEecCc--------------ccCCchHhhHHHHH
Confidence 999999987665543344444 3456788888899999999999843 23588999999999
Q ss_pred HHHHHHHhhhhc---CCcEEEEEecceecCCCChHHHHHHhcCcccccccccCCcccccccHHHHHHHHHHHccCCCCCc
Q 017914 196 AEKGWLNLGRDL---GISAQVFRLGGIYGPGRSSVDTIIKQLPLSEGQKMRRARQYTSRIHVDDICQVLSASIDKPSAWN 272 (364)
Q Consensus 196 ~E~~~~~~~~~~---~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~~g~ 272 (364)
+|..+.++.++. +..++++|.|+|.|..+..++.+.++..-+..-.+.+++-.|-|+.+.|.++.++.+......|+
T Consensus 393 aE~~~~a~~~~~~~~~T~f~~VRFGNVlGSrGSViPlFk~QI~~GgplTvTdp~mtRyfMTI~EAv~LVlqA~a~~~gGe 472 (588)
T COG1086 393 AEKLFQAANRNVSGTGTRFCVVRFGNVLGSRGSVIPLFKKQIAEGGPLTVTDPDMTRFFMTIPEAVQLVLQAGAIAKGGE 472 (588)
T ss_pred HHHHHHHHhhccCCCCcEEEEEEecceecCCCCCHHHHHHHHHcCCCccccCCCceeEEEEHHHHHHHHHHHHhhcCCCc
Confidence 999999987633 37899999999999998877776666444444455677888999999999999999999999999
Q ss_pred eEEEeCCCCCCHHHHHHHHHHHhcCC
Q 017914 273 VYNVVDDDPAPREEVFAYAWDLVEKK 298 (364)
Q Consensus 273 ~~~i~~~~~~s~~el~~~i~~~~g~~ 298 (364)
+|-+-.|++++..|+++.+.+..|..
T Consensus 473 ifvldMGepvkI~dLAk~mi~l~g~~ 498 (588)
T COG1086 473 IFVLDMGEPVKIIDLAKAMIELAGQT 498 (588)
T ss_pred EEEEcCCCCeEHHHHHHHHHHHhCCC
Confidence 99999999999999999999999843
|
|
| >PLN02260 probable rhamnose biosynthetic enzyme | Back alignment and domain information |
|---|
Probab=99.91 E-value=6.6e-23 Score=202.90 Aligned_cols=256 Identities=11% Similarity=0.116 Sum_probs=174.8
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCChhhH--Hhh--ccCceeeEEEEec
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETAL--MIL--TTLKNYTHLLVSI 131 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~--~~~--~~~d~v~~~~~~~ 131 (364)
...|+||||| +||||++|++.|.++|++|... .+|++|.+. ..+ .++|.|+|+|+..
T Consensus 378 ~~~mkiLVtGa~G~iG~~l~~~L~~~g~~v~~~------------------~~~l~d~~~v~~~i~~~~pd~Vih~Aa~~ 439 (668)
T PLN02260 378 KPSLKFLIYGRTGWIGGLLGKLCEKQGIAYEYG------------------KGRLEDRSSLLADIRNVKPTHVFNAAGVT 439 (668)
T ss_pred CCCceEEEECCCchHHHHHHHHHHhCCCeEEee------------------ccccccHHHHHHHHHhhCCCEEEECCccc
Confidence 3457999999 9999999999999999988311 134555442 333 3689999999876
Q ss_pred CCCC---CCCCh------hhhHHHHHHHHhhcCCccEEEEEccceeecCC------CCccccCCCCCCC-CChhHHHHHH
Q 017914 132 PPLE---GTGDP------MLKHGELLRSTLMNGHLQWLGYLSSTGVYGHS------GGAWVDEDYPANP-TTELGRLRLS 195 (364)
Q Consensus 132 ~~~~---~~~~~------~~~~~~~l~~a~~~~~~~r~v~~Ss~~vy~~~------~~~~~~E~~~~~~-~~~Y~~sK~~ 195 (364)
.... ...++ +.....+++++|++.+++ +|++||..||+.. ...+++|+++..+ .+.|+.+|.+
T Consensus 440 ~~~~~~~~~~~~~~~~~~N~~gt~~l~~a~~~~g~~-~v~~Ss~~v~~~~~~~~~~~~~p~~E~~~~~~~~~~Yg~sK~~ 518 (668)
T PLN02260 440 GRPNVDWCESHKVETIRANVVGTLTLADVCRENGLL-MMNFATGCIFEYDAKHPEGSGIGFKEEDKPNFTGSFYSKTKAM 518 (668)
T ss_pred CCCCCChHHhCHHHHHHHHhHHHHHHHHHHHHcCCe-EEEEcccceecCCcccccccCCCCCcCCCCCCCCChhhHHHHH
Confidence 4221 11122 234456888889888885 6778888888642 2346888776655 5899999999
Q ss_pred HHHHHHHhhhhcCCcEEEEEecceecCC----CChHHHHHHhcCcccccccccCCcccccccHHHHHHHHHHHccCCCCC
Q 017914 196 AEKGWLNLGRDLGISAQVFRLGGIYGPG----RSSVDTIIKQLPLSEGQKMRRARQYTSRIHVDDICQVLSASIDKPSAW 271 (364)
Q Consensus 196 ~E~~~~~~~~~~~~~~~ilRp~~v~g~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~~g 271 (364)
+|++++.+. ++.++|+.++|+.+ .+++..+++.... ..+ + .+..+++|++.+++.+++. ..+
T Consensus 519 ~E~~~~~~~-----~~~~~r~~~~~~~~~~~~~nfv~~~~~~~~~---~~v--p---~~~~~~~~~~~~~~~l~~~-~~~ 584 (668)
T PLN02260 519 VEELLREYD-----NVCTLRVRMPISSDLSNPRNFITKISRYNKV---VNI--P---NSMTVLDELLPISIEMAKR-NLR 584 (668)
T ss_pred HHHHHHhhh-----hheEEEEEEecccCCCCccHHHHHHhcccee---ecc--C---CCceehhhHHHHHHHHHHh-CCC
Confidence 999998763 46788888888643 3455555544221 111 1 2347788999998888875 335
Q ss_pred ceEEEeCCCCCCHHHHHHHHHHHhcCCCCCcccCCCCCCCCCCC-ccCCCCCCCeEEEchhHHHhcCcccCCCCHHHHHH
Q 017914 272 NVYNVVDDDPAPREEVFAYAWDLVEKKWPGLLKHRKPRENTESS-NEKGSSRGEKRVSNVRMKKELGVRLWHPSYKSGLQ 350 (364)
Q Consensus 272 ~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~e~l~ 350 (364)
++||++++..+||.|+++.+.+.++.... ..+... ...+ .....++.. .+|++|+++.+|. +. +|+|+|.
T Consensus 585 giyni~~~~~~s~~e~a~~i~~~~~~~~~-~~~~~~----~~~~~~~~a~rp~~-~l~~~k~~~~~~~-~~--~~~~~l~ 655 (668)
T PLN02260 585 GIWNFTNPGVVSHNEILEMYKDYIDPGFK-WSNFTL----EEQAKVIVAPRSNN-EMDASKLKKEFPE-LL--SIKESLI 655 (668)
T ss_pred ceEEecCCCcCcHHHHHHHHHHhcCCccc-ccccCH----HHhhhHhhCCCccc-cccHHHHHHhCcc-cc--chHHHHH
Confidence 69999999999999999999998742110 011100 0011 012234444 7999999988898 54 7999999
Q ss_pred HHHH
Q 017914 351 SIIN 354 (364)
Q Consensus 351 ~~~~ 354 (364)
+++.
T Consensus 656 ~~~~ 659 (668)
T PLN02260 656 KYVF 659 (668)
T ss_pred HHHh
Confidence 8875
|
|
| >KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=99.91 E-value=2.5e-23 Score=173.18 Aligned_cols=282 Identities=14% Similarity=0.145 Sum_probs=201.8
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchh-hhhhh---h-CCceEEEccCChhhH--HhhccCceeeEEE
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMK-KKELE---Q-SGFDVHLFNANETAL--MILTTLKNYTHLL 128 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~-~~~l~---~-~~~~~~~~D~~~~~~--~~~~~~d~v~~~~ 128 (364)
..+..+.|.| |||+|++++.+|.+.|-+|++-.|..+. ..+++ + ..+-+..+|+.|++. .+.+..++||+++
T Consensus 59 ~sGiVaTVFGAtGFlGryvvnklak~GSQviiPyR~d~~~~r~lkvmGdLGQvl~~~fd~~DedSIr~vvk~sNVVINLI 138 (391)
T KOG2865|consen 59 VSGIVATVFGATGFLGRYVVNKLAKMGSQVIIPYRGDEYDPRHLKVMGDLGQVLFMKFDLRDEDSIRAVVKHSNVVINLI 138 (391)
T ss_pred ccceEEEEecccccccHHHHHHHhhcCCeEEEeccCCccchhheeecccccceeeeccCCCCHHHHHHHHHhCcEEEEee
Confidence 3445667779 9999999999999999999999996442 22222 1 357788999999886 7789999999999
Q ss_pred EecCCCC--CCCChhhhHHHHHHHHhhcCCccEEEEEccceeecCCCCccccCCCCCCCCChhHHHHHHHHHHHHHhhhh
Q 017914 129 VSIPPLE--GTGDPMLKHGELLRSTLMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANPTTELGRLRLSAEKGWLNLGRD 206 (364)
Q Consensus 129 ~~~~~~~--~~~~~~~~~~~~l~~a~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~~sK~~~E~~~~~~~~~ 206 (364)
+.-..+. ++.|......+.+...|++.|+.|||++|+.+.- ....+-|-++|.++|..+++...
T Consensus 139 Grd~eTknf~f~Dvn~~~aerlAricke~GVerfIhvS~Lgan-------------v~s~Sr~LrsK~~gE~aVrdafP- 204 (391)
T KOG2865|consen 139 GRDYETKNFSFEDVNVHIAERLARICKEAGVERFIHVSCLGAN-------------VKSPSRMLRSKAAGEEAVRDAFP- 204 (391)
T ss_pred ccccccCCcccccccchHHHHHHHHHHhhChhheeehhhcccc-------------ccChHHHHHhhhhhHHHHHhhCC-
Confidence 8755544 3566666777888888999999999999986521 22446799999999999998654
Q ss_pred cCCcEEEEEecceecCCCChHHHHHHhcC-cccccccccC-CcccccccHHHHHHHHHHHccCCCC-CceEEEeCCCCCC
Q 017914 207 LGISAQVFRLGGIYGPGRSSVDTIIKQLP-LSEGQKMRRA-RQYTSRIHVDDICQVLSASIDKPSA-WNVYNVVDDDPAP 283 (364)
Q Consensus 207 ~~~~~~ilRp~~v~g~~~~~~~~~~~~~~-~~~~~~~~~~-~~~~~~i~v~Dva~~~~~~l~~~~~-g~~~~i~~~~~~s 283 (364)
..+|+||+.+||..+.+++.+..... +......+.| +..-..|+|-|||.+|+.+++.+.. |++|.+++|..++
T Consensus 205 ---eAtIirPa~iyG~eDrfln~ya~~~rk~~~~pL~~~GekT~K~PVyV~DVaa~IvnAvkDp~s~Gktye~vGP~~yq 281 (391)
T KOG2865|consen 205 ---EATIIRPADIYGTEDRFLNYYASFWRKFGFLPLIGKGEKTVKQPVYVVDVAAAIVNAVKDPDSMGKTYEFVGPDRYQ 281 (391)
T ss_pred ---cceeechhhhcccchhHHHHHHHHHHhcCceeeecCCcceeeccEEEehHHHHHHHhccCccccCceeeecCCchhh
Confidence 38999999999999888776665422 2222222223 2334559999999999999999855 8999999999999
Q ss_pred HHHHHHHHHHHhcCCCCCcccCCCC----------CCCCCCC-------ccC-CCCCCCeEEEchhHHHhcCcccCCCCH
Q 017914 284 REEVFAYAWDLVEKKWPGLLKHRKP----------RENTESS-------NEK-GSSRGEKRVSNVRMKKELGVRLWHPSY 345 (364)
Q Consensus 284 ~~el~~~i~~~~g~~~~~~~~~~~~----------~~~~~~~-------~~~-~~~~~~~~~d~~k~~~~lG~~p~~~~~ 345 (364)
+.|+++++-+....- +.....+.+ -....++ +.- .....+..+++...-++||..+. .+
T Consensus 282 l~eLvd~my~~~~~~-~ry~r~~mP~f~a~a~~~~f~~~pf~~~~pln~d~ie~~~v~~~vlt~~~tleDLgv~~t--~l 358 (391)
T KOG2865|consen 282 LSELVDIMYDMAREW-PRYVRLPMPIFKAMAAARDFMIVPFPPPSPLNRDQIERLTVTDLVLTGAPTLEDLGVVLT--KL 358 (391)
T ss_pred HHHHHHHHHHHHhhc-cccccCCcHHHHHHHhhhheeecCCCCCCCCCHHHhhheeehhhhcCCCCcHhhcCceee--ec
Confidence 999999988776442 222222111 0001111 111 12344556777777789999865 57
Q ss_pred HHHHHHHHHHhcc
Q 017914 346 KSGLQSIINQMDQ 358 (364)
Q Consensus 346 ~e~l~~~~~~~~~ 358 (364)
|...-+.+..+++
T Consensus 359 e~~~~e~l~~yR~ 371 (391)
T KOG2865|consen 359 ELYPVEFLRQYRK 371 (391)
T ss_pred ccccHHHHHHHhh
Confidence 7666666665554
|
|
| >PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.4e-23 Score=174.38 Aligned_cols=180 Identities=23% Similarity=0.354 Sum_probs=141.1
Q ss_pred EEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCChhhH--HhhccCceeeEEEEecCCCCCCC
Q 017914 62 MLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETAL--MILTTLKNYTHLLVSIPPLEGTG 138 (364)
Q Consensus 62 vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~--~~~~~~d~v~~~~~~~~~~~~~~ 138 (364)
|+|+| ||++|+.++++|+++|++|++++|++++.+. ..+++++.+|+.|++. .++.++|+|+++++....
T Consensus 1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~~--~~~~~~~~~d~~d~~~~~~al~~~d~vi~~~~~~~~----- 73 (183)
T PF13460_consen 1 ILVFGATGFVGRALAKQLLRRGHEVTALVRSPSKAED--SPGVEIIQGDLFDPDSVKAALKGADAVIHAAGPPPK----- 73 (183)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTSEEEEEESSGGGHHH--CTTEEEEESCTTCHHHHHHHHTTSSEEEECCHSTTT-----
T ss_pred eEEECCCChHHHHHHHHHHHCCCEEEEEecCchhccc--ccccccceeeehhhhhhhhhhhhcchhhhhhhhhcc-----
Confidence 79999 9999999999999999999999999887766 5899999999999874 788999999999853221
Q ss_pred ChhhhHHHHHHHHhhcCCccEEEEEccceeecCCCCccccCCCCCCCCChhHHHHHHHHHHHHHhhhhcCCcEEEEEecc
Q 017914 139 DPMLKHGELLRSTLMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANPTTELGRLRLSAEKGWLNLGRDLGISAQVFRLGG 218 (364)
Q Consensus 139 ~~~~~~~~~l~~a~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilRp~~ 218 (364)
.....++++++++..+++|+|++|+.++|.........+..+. ...|...|..+|+.++ +.+++++++||+.
T Consensus 74 --~~~~~~~~~~a~~~~~~~~~v~~s~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~e~~~~----~~~~~~~ivrp~~ 145 (183)
T PF13460_consen 74 --DVDAAKNIIEAAKKAGVKRVVYLSSAGVYRDPPGLFSDEDKPI--FPEYARDKREAEEALR----ESGLNWTIVRPGW 145 (183)
T ss_dssp --HHHHHHHHHHHHHHTTSSEEEEEEETTGTTTCTSEEEGGTCGG--GHHHHHHHHHHHHHHH----HSTSEEEEEEESE
T ss_pred --cccccccccccccccccccceeeeccccCCCCCcccccccccc--hhhhHHHHHHHHHHHH----hcCCCEEEEECcE
Confidence 2566789999999999999999999999886555322222221 1568899999988775 4599999999999
Q ss_pred eecCCCChHHHHHHhcCcccccccccCCcccccccHHHHHHHHHHHccC
Q 017914 219 IYGPGRSSVDTIIKQLPLSEGQKMRRARQYTSRIHVDDICQVLSASIDK 267 (364)
Q Consensus 219 v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~ 267 (364)
+||+.... ..+.. ..+....++|+++|+|++++.++++
T Consensus 146 ~~~~~~~~-------~~~~~----~~~~~~~~~i~~~DvA~~~~~~l~~ 183 (183)
T PF13460_consen 146 IYGNPSRS-------YRLIK----EGGPQGVNFISREDVAKAIVEALEN 183 (183)
T ss_dssp EEBTTSSS-------EEEES----STSTTSHCEEEHHHHHHHHHHHHH-
T ss_pred eEeCCCcc-------eeEEe----ccCCCCcCcCCHHHHHHHHHHHhCC
Confidence 99986431 00100 0334456889999999999998864
|
... |
| >PLN02503 fatty acyl-CoA reductase 2 | Back alignment and domain information |
|---|
Probab=99.91 E-value=6.1e-23 Score=195.63 Aligned_cols=240 Identities=15% Similarity=0.074 Sum_probs=167.2
Q ss_pred CCCCCeEEEEc-CChhhHHHHHHHHhCCC---EEEEEEeCchhhh-------hhh--------------------hCCce
Q 017914 56 WQSPNRMLILG-MGFVGRIFAEKIKNQGW---VVSGTCTNVMKKK-------ELE--------------------QSGFD 104 (364)
Q Consensus 56 ~~~~~~vlVtG-tG~iG~~l~~~L~~~g~---~V~~~~r~~~~~~-------~l~--------------------~~~~~ 104 (364)
...+++||||| |||||++|+++|++.+. +|+++.|...... .+. ..++.
T Consensus 116 f~~~k~VlVTGaTGFLGk~LlekLLr~~~~v~kIy~LvR~k~~~~a~eRl~~~l~~~~lf~~l~~~~g~~~~~~~~~Ki~ 195 (605)
T PLN02503 116 FLRGKNFLITGATGFLAKVLIEKILRTNPDVGKIYLLIKAKDKEAAIERLKNEVIDAELFKCLQETHGKSYQSFMLSKLV 195 (605)
T ss_pred hhcCCEEEEcCCchHHHHHHHHHHHHhCCCCcEEEEEEecCCchhHHHHHHHHHhhhhhHHHHHHhcCccccccccccEE
Confidence 34679999999 99999999999998764 6899999643211 110 13578
Q ss_pred EEEccCChhhH--------HhhccCceeeEEEEecCCCCCCC---ChhhhHHHHHHHHhhcC-CccEEEEEccceeecCC
Q 017914 105 VHLFNANETAL--------MILTTLKNYTHLLVSIPPLEGTG---DPMLKHGELLRSTLMNG-HLQWLGYLSSTGVYGHS 172 (364)
Q Consensus 105 ~~~~D~~~~~~--------~~~~~~d~v~~~~~~~~~~~~~~---~~~~~~~~~l~~a~~~~-~~~r~v~~Ss~~vy~~~ 172 (364)
++.+|++++++ .+.+.+|.|+|+|+......... ..+...+.+++++++.. ++++|||+||..|||..
T Consensus 196 ~v~GDl~d~~LGLs~~~~~~L~~~vDiVIH~AA~v~f~~~~~~a~~vNV~GT~nLLelA~~~~~lk~fV~vSTayVyG~~ 275 (605)
T PLN02503 196 PVVGNVCESNLGLEPDLADEIAKEVDVIINSAANTTFDERYDVAIDINTRGPCHLMSFAKKCKKLKLFLQVSTAYVNGQR 275 (605)
T ss_pred EEEeeCCCcccCCCHHHHHHHHhcCCEEEECccccccccCHHHHHHHHHHHHHHHHHHHHHcCCCCeEEEccCceeecCC
Confidence 89999999732 33467999999999876432211 12334456788888654 57899999999999976
Q ss_pred CCccccCCCC-----------------------------------------------------------CCCCChhHHHH
Q 017914 173 GGAWVDEDYP-----------------------------------------------------------ANPTTELGRLR 193 (364)
Q Consensus 173 ~~~~~~E~~~-----------------------------------------------------------~~~~~~Y~~sK 193 (364)
.+. +.|... ..-.+.|..+|
T Consensus 276 ~G~-i~E~~y~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~~~d~~~~~~~~~~~~~~l~~~g~~~~~~~~~pNtYt~TK 354 (605)
T PLN02503 276 QGR-IMEKPFRMGDCIARELGISNSLPHNRPALDIEAEIKLALDSKRHGFQSNSFAQKMKDLGLERAKLYGWQDTYVFTK 354 (605)
T ss_pred CCe-eeeeecCcccccccccccccccccccccCCHHHHHHHHHHhhhcccchHHHHHHhhhcccchhhhCCCCChHHHHH
Confidence 422 222110 01126799999
Q ss_pred HHHHHHHHHhhhhcCCcEEEEEecceecCCCChHHHHHHh----------cCcc-cccccccCCcccccccHHHHHHHHH
Q 017914 194 LSAEKGWLNLGRDLGISAQVFRLGGIYGPGRSSVDTIIKQ----------LPLS-EGQKMRRARQYTSRIHVDDICQVLS 262 (364)
Q Consensus 194 ~~~E~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~----------~~~~-~~~~~~~~~~~~~~i~v~Dva~~~~ 262 (364)
..+|++++++. .+++++|+||+.|.+....++.-+..+ ...+ .....++++...|+|+||.++++++
T Consensus 355 ~lAE~lV~~~~--~~LPv~IvRPsiV~st~~eP~pGw~d~~~~~~p~~~~~g~G~lr~~~~~~~~~~DiVPVD~vvna~i 432 (605)
T PLN02503 355 AMGEMVINSMR--GDIPVVIIRPSVIESTWKDPFPGWMEGNRMMDPIVLYYGKGQLTGFLADPNGVLDVVPADMVVNATL 432 (605)
T ss_pred HHHHHHHHHhc--CCCCEEEEcCCEecccccCCccccccCccccchhhhheeccceeEEEeCCCeeEeEEeecHHHHHHH
Confidence 99999998754 489999999999944322222111111 0011 1113456788899999999999999
Q ss_pred HHccC-----CCCCceEEEeCC--CCCCHHHHHHHHHHHhcCC
Q 017914 263 ASIDK-----PSAWNVYNVVDD--DPAPREEVFAYAWDLVEKK 298 (364)
Q Consensus 263 ~~l~~-----~~~g~~~~i~~~--~~~s~~el~~~i~~~~g~~ 298 (364)
.++.. ...+++||++++ ++++|+|+.+.+.+.+...
T Consensus 433 ~a~a~~~~~~~~~~~vYn~ts~~~nP~t~~~~~~~~~~~~~~~ 475 (605)
T PLN02503 433 AAMAKHGGAAKPEINVYQIASSVVNPLVFQDLARLLYEHYKSS 475 (605)
T ss_pred HHHHhhhcccCCCCCEEEeCCCCCCCeEHHHHHHHHHHHHhhC
Confidence 88432 124789999998 8999999999999887543
|
|
| >PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.7e-23 Score=180.99 Aligned_cols=198 Identities=17% Similarity=0.158 Sum_probs=118.1
Q ss_pred EEc-CChhhHHHHHHHHhCCC--EEEEEEeCchhh---hhh----------------hhCCceEEEccCChhhH------
Q 017914 64 ILG-MGFVGRIFAEKIKNQGW--VVSGTCTNVMKK---KEL----------------EQSGFDVHLFNANETAL------ 115 (364)
Q Consensus 64 VtG-tG~iG~~l~~~L~~~g~--~V~~~~r~~~~~---~~l----------------~~~~~~~~~~D~~~~~~------ 115 (364)
||| |||+|++|+++|++++. +|+++.|..+.. +.+ ...+++++.||++++.+
T Consensus 1 lTGaTGflG~~ll~~Ll~~~~~~~I~cLvR~~~~~~~~~rl~~~l~~~~~~~~~~~~~~~ri~~v~GDl~~~~lGL~~~~ 80 (249)
T PF07993_consen 1 LTGATGFLGSHLLEELLRQPPDVKIYCLVRASSSQSALERLKDALKEYGLWDDLDKEALSRIEVVEGDLSQPNLGLSDED 80 (249)
T ss_dssp EE-TTSHHHHHHHHHHHHHS-TTEEEEEE-SSSHHHHHHHHHGGG-SS-HHHHH-HHHTTTEEEEE--TTSGGGG--HHH
T ss_pred CcCCCcHHHHHHHHHHHcCCCCcEEEEEEeCcccccchhhhhhhcccccchhhhhhhhhccEEEEeccccccccCCChHH
Confidence 799 99999999999999976 999999976331 111 13689999999999763
Q ss_pred --HhhccCceeeEEEEecCCCCCCC---ChhhhHHHHHHHHhhcCCccEEEEEccceeecCCCCcc---------ccCCC
Q 017914 116 --MILTTLKNYTHLLVSIPPLEGTG---DPMLKHGELLRSTLMNGHLQWLGYLSSTGVYGHSGGAW---------VDEDY 181 (364)
Q Consensus 116 --~~~~~~d~v~~~~~~~~~~~~~~---~~~~~~~~~l~~a~~~~~~~r~v~~Ss~~vy~~~~~~~---------~~E~~ 181 (364)
...+.+|.|+|+++.......+. ..+...+.++++.|...+.++|+|+||..+.+...+.. .+...
T Consensus 81 ~~~L~~~v~~IiH~Aa~v~~~~~~~~~~~~NV~gt~~ll~la~~~~~~~~~~iSTa~v~~~~~~~~~~~~~~~~~~~~~~ 160 (249)
T PF07993_consen 81 YQELAEEVDVIIHCAASVNFNAPYSELRAVNVDGTRNLLRLAAQGKRKRFHYISTAYVAGSRPGTIEEKVYPEEEDDLDP 160 (249)
T ss_dssp HHHHHHH--EEEE--SS-SBS-S--EEHHHHHHHHHHHHHHHTSSS---EEEEEEGGGTTS-TTT--SSS-HHH--EEE-
T ss_pred hhccccccceeeecchhhhhcccchhhhhhHHHHHHHHHHHHHhccCcceEEeccccccCCCCCcccccccccccccchh
Confidence 23378999999999888765543 34556778899999877777999999955554433211 11112
Q ss_pred CCCCCChhHHHHHHHHHHHHHhhhhcCCcEEEEEecceecCCC-------ChHHH-HHHhcCcccc-cccccCCcccccc
Q 017914 182 PANPTTELGRLRLSAEKGWLNLGRDLGISAQVFRLGGIYGPGR-------SSVDT-IIKQLPLSEG-QKMRRARQYTSRI 252 (364)
Q Consensus 182 ~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilRp~~v~g~~~-------~~~~~-~~~~~~~~~~-~~~~~~~~~~~~i 252 (364)
.....+.|..||+.+|++++++.++.|++++|+|||.++|... ..+.. +......+.. ...+......+++
T Consensus 161 ~~~~~~gY~~SK~~aE~~l~~a~~~~g~p~~I~Rp~~i~g~~~~G~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~d~v 240 (249)
T PF07993_consen 161 PQGFPNGYEQSKWVAERLLREAAQRHGLPVTIYRPGIIVGDSRTGWWNSDDFFPYLLRSCIALGAFPDLPGDPDARLDLV 240 (249)
T ss_dssp -TTSEE-HHHHHHHHHHHHHHHHHHH---EEEEEE-EEE-SSSSS---TTBHHHHHHHHHHHH-EEES-SB---TT--EE
T ss_pred hccCCccHHHHHHHHHHHHHHHHhcCCceEEEEecCcccccCCCceeeccchHHHHHHHHHHcCCcccccCCCCceEeEE
Confidence 3345579999999999999999888899999999999999432 11222 2222111111 1223445569999
Q ss_pred cHHHHHHHH
Q 017914 253 HVDDICQVL 261 (364)
Q Consensus 253 ~v~Dva~~~ 261 (364)
+||.+|++|
T Consensus 241 PVD~va~aI 249 (249)
T PF07993_consen 241 PVDYVARAI 249 (249)
T ss_dssp EHHHHHHHH
T ss_pred CHHHHHhhC
Confidence 999999986
|
A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A. |
| >PLN00141 Tic62-NAD(P)-related group II protein; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.1e-21 Score=171.33 Aligned_cols=223 Identities=17% Similarity=0.159 Sum_probs=152.7
Q ss_pred CCCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhh--hCCceEEEccCChh-h-H-Hhh-ccCceeeEEE
Q 017914 56 WQSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELE--QSGFDVHLFNANET-A-L-MIL-TTLKNYTHLL 128 (364)
Q Consensus 56 ~~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~--~~~~~~~~~D~~~~-~-~-~~~-~~~d~v~~~~ 128 (364)
...+|+||||| +|+||+.++++|+++||+|++++|+.++..... ..+++++.+|++|. + + ..+ .++|.|++++
T Consensus 14 ~~~~~~ilItGasG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~Dl~d~~~~l~~~~~~~~d~vi~~~ 93 (251)
T PLN00141 14 NVKTKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRDVDKAKTSLPQDPSLQIVRADVTEGSDKLVEAIGDDSDAVICAT 93 (251)
T ss_pred cccCCeEEEECCCcHHHHHHHHHHHhCCCEEEEEecCHHHHHHhcccCCceEEEEeeCCCCHHHHHHHhhcCCCEEEECC
Confidence 45568999999 999999999999999999999999877644322 13688999999983 3 3 555 5899999887
Q ss_pred EecCCCCCCC--ChhhhHHHHHHHHhhcCCccEEEEEccceeecCCCCccccCCC-CCCCCChhHHHHHHHHHHHHHhhh
Q 017914 129 VSIPPLEGTG--DPMLKHGELLRSTLMNGHLQWLGYLSSTGVYGHSGGAWVDEDY-PANPTTELGRLRLSAEKGWLNLGR 205 (364)
Q Consensus 129 ~~~~~~~~~~--~~~~~~~~~l~~a~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~-~~~~~~~Y~~sK~~~E~~~~~~~~ 205 (364)
+......... ........++++++...++++|||+||.++|+...+.+..+.. ...+...|...|..+|++++
T Consensus 94 g~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~iV~iSS~~v~g~~~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~---- 169 (251)
T PLN00141 94 GFRRSFDPFAPWKVDNFGTVNLVEACRKAGVTRFILVSSILVNGAAMGQILNPAYIFLNLFGLTLVAKLQAEKYIR---- 169 (251)
T ss_pred CCCcCCCCCCceeeehHHHHHHHHHHHHcCCCEEEEEccccccCCCcccccCcchhHHHHHHHHHHHHHHHHHHHH----
Confidence 5432111111 1122346788999988889999999999999754333222111 11122334557888887765
Q ss_pred hcCCcEEEEEecceecCCCChHHHHHHhcCcccccccccCCcccccccHHHHHHHHHHHccCCCC-CceEEEeCC---CC
Q 017914 206 DLGISAQVFRLGGIYGPGRSSVDTIIKQLPLSEGQKMRRARQYTSRIHVDDICQVLSASIDKPSA-WNVYNVVDD---DP 281 (364)
Q Consensus 206 ~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~~-g~~~~i~~~---~~ 281 (364)
+.++++++|||+++++..... . .... ........+|+.+|+|++++.++..+.. +.++.+.+. ..
T Consensus 170 ~~gi~~~iirpg~~~~~~~~~--~----~~~~-----~~~~~~~~~i~~~dvA~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (251)
T PLN00141 170 KSGINYTIVRPGGLTNDPPTG--N----IVME-----PEDTLYEGSISRDQVAEVAVEALLCPESSYKVVEIVARADAPK 238 (251)
T ss_pred hcCCcEEEEECCCccCCCCCc--e----EEEC-----CCCccccCcccHHHHHHHHHHHhcChhhcCcEEEEecCCCCCc
Confidence 458999999999999764210 0 0000 0011123469999999999999988754 678888863 23
Q ss_pred CCHHHHHHHHHH
Q 017914 282 APREEVFAYAWD 293 (364)
Q Consensus 282 ~s~~el~~~i~~ 293 (364)
.++.++...+++
T Consensus 239 ~~~~~~~~~~~~ 250 (251)
T PLN00141 239 RSYKDLFASIKQ 250 (251)
T ss_pred hhHHHHHHHhhc
Confidence 788888877654
|
|
| >COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.3e-22 Score=177.38 Aligned_cols=230 Identities=17% Similarity=0.162 Sum_probs=159.4
Q ss_pred CeEEEEc-CChhhHHHHHHHHhCC-CEEEEEEeCchhhhh----------------hhhCCceEEEccCChhhH------
Q 017914 60 NRMLILG-MGFVGRIFAEKIKNQG-WVVSGTCTNVMKKKE----------------LEQSGFDVHLFNANETAL------ 115 (364)
Q Consensus 60 ~~vlVtG-tG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~----------------l~~~~~~~~~~D~~~~~~------ 115 (364)
++||+|| |||+|++|+..|+.+- .+|++++|..+.... ....+++++.+|+..+++
T Consensus 1 ~~vlLTGATGFLG~yLl~eLL~~~~~kv~cLVRA~s~E~a~~RL~~~~~~~~~~~e~~~~ri~vv~gDl~e~~lGL~~~~ 80 (382)
T COG3320 1 RNVLLTGATGFLGAYLLLELLDRSDAKVICLVRAQSDEAALARLEKTFDLYRHWDELSADRVEVVAGDLAEPDLGLSERT 80 (382)
T ss_pred CeEEEecCchHhHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHHhhhhhhhhhhhcceEEEEecccccccCCCCHHH
Confidence 4799999 9999999999999875 599999997653221 122678999999997553
Q ss_pred --HhhccCceeeEEEEecCCCCC---CCChhhhHHHHHHHHhhcCCccEEEEEccceeecCCCCcc----ccCCCCC---
Q 017914 116 --MILTTLKNYTHLLVSIPPLEG---TGDPMLKHGELLRSTLMNGHLQWLGYLSSTGVYGHSGGAW----VDEDYPA--- 183 (364)
Q Consensus 116 --~~~~~~d~v~~~~~~~~~~~~---~~~~~~~~~~~l~~a~~~~~~~r~v~~Ss~~vy~~~~~~~----~~E~~~~--- 183 (364)
...+.+|.|+|.++..+.... ..+++..++..+++.+...+.|.++|+||++|+....... .+|..+.
T Consensus 81 ~~~La~~vD~I~H~gA~Vn~v~pYs~L~~~NVlGT~evlrLa~~gk~Kp~~yVSsisv~~~~~~~~~~~~~~~~~~~~~~ 160 (382)
T COG3320 81 WQELAENVDLIIHNAALVNHVFPYSELRGANVLGTAEVLRLAATGKPKPLHYVSSISVGETEYYSNFTVDFDEISPTRNV 160 (382)
T ss_pred HHHHhhhcceEEecchhhcccCcHHHhcCcchHhHHHHHHHHhcCCCceeEEEeeeeeccccccCCCccccccccccccc
Confidence 334679999999998876543 4677788888999999888899999999999987543222 2222221
Q ss_pred --CCCChhHHHHHHHHHHHHHhhhhcCCcEEEEEecceecCCC-------ChHHHHHHh-cCcccccccccCCccccccc
Q 017914 184 --NPTTELGRLRLSAEKGWLNLGRDLGISAQVFRLGGIYGPGR-------SSVDTIIKQ-LPLSEGQKMRRARQYTSRIH 253 (364)
Q Consensus 184 --~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilRp~~v~g~~~-------~~~~~~~~~-~~~~~~~~~~~~~~~~~~i~ 253 (364)
.+.++|++||+++|.+++++.+. |++++|+|||++.|+.. +++.++... ..++... ......+.+.
T Consensus 161 ~~~~~~GY~~SKwvaE~Lvr~A~~r-GLpv~I~Rpg~I~gds~tG~~n~~D~~~Rlv~~~~~lg~~P---~~~~~~~~~p 236 (382)
T COG3320 161 GQGLAGGYGRSKWVAEKLVREAGDR-GLPVTIFRPGYITGDSRTGALNTRDFLTRLVLGLLQLGIAP---DSEYSLDMLP 236 (382)
T ss_pred cCccCCCcchhHHHHHHHHHHHhhc-CCCeEEEecCeeeccCccCccccchHHHHHHHHHHHhCCCC---CcccchhhCc
Confidence 34689999999999999998876 99999999999999874 244444443 1111111 1111222233
Q ss_pred -----------HHHHHHHHHHHccCCCC-CceEE-EeCCCCCCHHHHHHHHHH
Q 017914 254 -----------VDDICQVLSASIDKPSA-WNVYN-VVDDDPAPREEVFAYAWD 293 (364)
Q Consensus 254 -----------v~Dva~~~~~~l~~~~~-g~~~~-i~~~~~~s~~el~~~i~~ 293 (364)
+.-+++++..+...+.. -..|+ ...|..+.+.++.+.+.+
T Consensus 237 ~~~v~~~v~~~~~~~~~~~~~l~~~~~~~f~~~~~~~~~~~i~l~~~~~w~~~ 289 (382)
T COG3320 237 VDHVARAVVAPSVQVAEAIAALGAHSDIRFNQLHMLTHPDEIGLDEYVDWLIS 289 (382)
T ss_pred cceeeEEeehhhhhHHHHHHHhccCccchhhheecccCCCccchhHHHHhHhh
Confidence 33334444444433322 12333 344778999999999888
|
|
| >TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=99.88 E-value=2.9e-21 Score=206.39 Aligned_cols=236 Identities=16% Similarity=0.185 Sum_probs=171.7
Q ss_pred CCCeEEEEc-CChhhHHHHHHHHhCC----CEEEEEEeCchhhhhhh----------------hCCceEEEccCChhhH-
Q 017914 58 SPNRMLILG-MGFVGRIFAEKIKNQG----WVVSGTCTNVMKKKELE----------------QSGFDVHLFNANETAL- 115 (364)
Q Consensus 58 ~~~~vlVtG-tG~iG~~l~~~L~~~g----~~V~~~~r~~~~~~~l~----------------~~~~~~~~~D~~~~~~- 115 (364)
..++||||| |||+|++++++|++++ ++|+++.|......... ..++.++.+|++++.+
T Consensus 970 ~~~~VlvTGatGflG~~l~~~Ll~~~~~~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~gDl~~~~lg 1049 (1389)
T TIGR03443 970 TPITVFLTGATGFLGSFILRDLLTRRSNSNFKVFAHVRAKSEEAGLERLRKTGTTYGIWDEEWASRIEVVLGDLSKEKFG 1049 (1389)
T ss_pred CCceEEEeCCccccHHHHHHHHHhcCCCCCcEEEEEECcCChHHHHHHHHHHHHHhCCCchhhhcceEEEeccCCCccCC
Confidence 357999999 9999999999999887 89999999754322111 1368899999986532
Q ss_pred -------HhhccCceeeEEEEecCCCCCCC---ChhhhHHHHHHHHhhcCCccEEEEEccceeecCCC------------
Q 017914 116 -------MILTTLKNYTHLLVSIPPLEGTG---DPMLKHGELLRSTLMNGHLQWLGYLSSTGVYGHSG------------ 173 (364)
Q Consensus 116 -------~~~~~~d~v~~~~~~~~~~~~~~---~~~~~~~~~l~~a~~~~~~~r~v~~Ss~~vy~~~~------------ 173 (364)
.....+|.|+|+++......... ......+.++++++...++++|+|+||.++|+...
T Consensus 1050 l~~~~~~~l~~~~d~iiH~Aa~~~~~~~~~~~~~~nv~gt~~ll~~a~~~~~~~~v~vSS~~v~~~~~~~~~~~~~~~~~ 1129 (1389)
T TIGR03443 1050 LSDEKWSDLTNEVDVIIHNGALVHWVYPYSKLRDANVIGTINVLNLCAEGKAKQFSFVSSTSALDTEYYVNLSDELVQAG 1129 (1389)
T ss_pred cCHHHHHHHHhcCCEEEECCcEecCccCHHHHHHhHHHHHHHHHHHHHhCCCceEEEEeCeeecCcccccchhhhhhhcc
Confidence 34468999999998866433221 23455677888888888899999999999996421
Q ss_pred CccccCCCC-----CCCCChhHHHHHHHHHHHHHhhhhcCCcEEEEEecceecCCCC-------hHHHHHHh-cCccccc
Q 017914 174 GAWVDEDYP-----ANPTTELGRLRLSAEKGWLNLGRDLGISAQVFRLGGIYGPGRS-------SVDTIIKQ-LPLSEGQ 240 (364)
Q Consensus 174 ~~~~~E~~~-----~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilRp~~v~g~~~~-------~~~~~~~~-~~~~~~~ 240 (364)
...+.|+.+ ..+.+.|+.+|+.+|.++..+.+ .|++++++|||.+||+... ++..++.. ..+.
T Consensus 1130 ~~~~~e~~~~~~~~~~~~~~Y~~sK~~aE~l~~~~~~-~g~~~~i~Rpg~v~G~~~~g~~~~~~~~~~~~~~~~~~~--- 1205 (1389)
T TIGR03443 1130 GAGIPESDDLMGSSKGLGTGYGQSKWVAEYIIREAGK-RGLRGCIVRPGYVTGDSKTGATNTDDFLLRMLKGCIQLG--- 1205 (1389)
T ss_pred CCCCCcccccccccccCCCChHHHHHHHHHHHHHHHh-CCCCEEEECCCccccCCCcCCCCchhHHHHHHHHHHHhC---
Confidence 112334332 22346799999999999988765 4999999999999998632 23333322 1111
Q ss_pred ccccCCcccccccHHHHHHHHHHHccCCC---CCceEEEeCCCCCCHHHHHHHHHHHhcCC
Q 017914 241 KMRRARQYTSRIHVDDICQVLSASIDKPS---AWNVYNVVDDDPAPREEVFAYAWDLVEKK 298 (364)
Q Consensus 241 ~~~~~~~~~~~i~v~Dva~~~~~~l~~~~---~g~~~~i~~~~~~s~~el~~~i~~~~g~~ 298 (364)
......+.++|++++|+|++++.++.++. .+.+||++++..+++.++++.+.+. |.+
T Consensus 1206 ~~p~~~~~~~~~~Vddva~ai~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~-g~~ 1265 (1389)
T TIGR03443 1206 LIPNINNTVNMVPVDHVARVVVAAALNPPKESELAVAHVTGHPRIRFNDFLGTLKTY-GYD 1265 (1389)
T ss_pred CcCCCCCccccccHHHHHHHHHHHHhCCcccCCCCEEEeCCCCCCcHHHHHHHHHHh-CCC
Confidence 12233456899999999999999987653 2468999999899999999999764 554
|
Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal. |
| >KOG3019 consensus Predicted nucleoside-diphosphate sugar epimerase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.87 E-value=8.1e-22 Score=158.83 Aligned_cols=279 Identities=17% Similarity=0.172 Sum_probs=194.6
Q ss_pred CeEEEEc-CChhhHHHHH-----HHHhCC----CEEEEEEeCchhhhhhhhCCceEEEccCChhhHHhhccCceeeEEEE
Q 017914 60 NRMLILG-MGFVGRIFAE-----KIKNQG----WVVSGTCTNVMKKKELEQSGFDVHLFNANETALMILTTLKNYTHLLV 129 (364)
Q Consensus 60 ~~vlVtG-tG~iG~~l~~-----~L~~~g----~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~~~~~~~d~v~~~~~ 129 (364)
.+.++-+ +|+|+..|.. .+-+.+ |+|++++|++.+.. +.+...|..- ..-.++..+++++
T Consensus 13 r~a~~~~~~g~i~~nl~~~~~~~H~t~~~~a~~h~vtv~sR~pg~~r------itw~el~~~G----ip~sc~a~vna~g 82 (315)
T KOG3019|consen 13 RDAVSNWSNGIIRENLGSETSCCHDTNVHSADNHAVTVLSRSPGKAR------ITWPELDFPG----IPISCVAGVNAVG 82 (315)
T ss_pred ccCCCCccccchhccccCcccccccCCCCcccccceEEEecCCCCcc------cccchhcCCC----CceehHHHHhhhh
Confidence 4555556 8999988876 333334 89999999887632 2332222221 1113344444433
Q ss_pred ecC--CCCCCCC--------hhhhHHHHHHHHhhcCC--ccEEEEEccceeecCCCCccccCCCCCCCCChhHHHHHHHH
Q 017914 130 SIP--PLEGTGD--------PMLKHGELLRSTLMNGH--LQWLGYLSSTGVYGHSGGAWVDEDYPANPTTELGRLRLSAE 197 (364)
Q Consensus 130 ~~~--~~~~~~~--------~~~~~~~~l~~a~~~~~--~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~~sK~~~E 197 (364)
... +...+.. .....+..+.++++... .+.+|.+|.+++|-++....++|+.+....+...+.-.+-|
T Consensus 83 ~n~l~P~rRWsp~fqkev~gSRi~~t~~la~aI~~aPq~~~~~Vlv~gva~y~pS~s~eY~e~~~~qgfd~~srL~l~WE 162 (315)
T KOG3019|consen 83 NNALLPIRRWSPEFQKEVKGSRIRVTSKLADAINNAPQEARPTVLVSGVAVYVPSESQEYSEKIVHQGFDILSRLCLEWE 162 (315)
T ss_pred hhccCchhhcCHHHHHHhhcceeeHHHHHHHHHhcCCCCCCCeEEEEeeEEeccccccccccccccCChHHHHHHHHHHH
Confidence 211 1111111 11123345666666432 34799999999999888888999998877777776666666
Q ss_pred HHHHHhhhhcCCcEEEEEecceecCCCChHHHHHHhcCcccccccccCCcccccccHHHHHHHHHHHccCCCCCceEEEe
Q 017914 198 KGWLNLGRDLGISAQVFRLGGIYGPGRSSVDTIIKQLPLSEGQKMRRARQYTSRIHVDDICQVLSASIDKPSAWNVYNVV 277 (364)
Q Consensus 198 ~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~~g~~~~i~ 277 (364)
...+...+ ..+.+++|.|.|.|.+.+.+..|+-...+..++++++|+|+++|||++|++..+..+++++...++.|-+
T Consensus 163 ~aA~~~~~--~~r~~~iR~GvVlG~gGGa~~~M~lpF~~g~GGPlGsG~Q~fpWIHv~DL~~li~~ale~~~v~GViNgv 240 (315)
T KOG3019|consen 163 GAALKANK--DVRVALIRIGVVLGKGGGALAMMILPFQMGAGGPLGSGQQWFPWIHVDDLVNLIYEALENPSVKGVINGV 240 (315)
T ss_pred HHhhccCc--ceeEEEEEEeEEEecCCcchhhhhhhhhhccCCcCCCCCeeeeeeehHHHHHHHHHHHhcCCCCceeccc
Confidence 66554433 3789999999999999999998888888999999999999999999999999999999998776699999
Q ss_pred CCCCCCHHHHHHHHHHHhcCCCCCcccCCCCCC-CCCCCccCCCCCCCeEEEchhHHHhcCcccCCCCHHHHHHHHH
Q 017914 278 DDDPAPREEVFAYAWDLVEKKWPGLLKHRKPRE-NTESSNEKGSSRGEKRVSNVRMKKELGVRLWHPSYKSGLQSII 353 (364)
Q Consensus 278 ~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~e~l~~~~ 353 (364)
.|++.+..|+.+.+.++++++ .+++.+.... +..-++..........+-+.|+. ++||+++||..+++++.++
T Consensus 241 AP~~~~n~Ef~q~lg~aL~Rp--~~~pvP~fvvqA~fG~erA~~vLeGqKV~Pqral-~~Gf~f~yp~vk~Al~~i~ 314 (315)
T KOG3019|consen 241 APNPVRNGEFCQQLGSALSRP--SWLPVPDFVVQALFGPERATVVLEGQKVLPQRAL-ELGFEFKYPYVKDALRAIM 314 (315)
T ss_pred CCCccchHHHHHHHHHHhCCC--cccCCcHHHHHHHhCccceeEEeeCCcccchhHh-hcCceeechHHHHHHHHHh
Confidence 999999999999999999987 2233221100 01112222333344455677775 8999999999999998765
|
|
| >PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA | Back alignment and domain information |
|---|
Probab=99.86 E-value=2.5e-21 Score=167.16 Aligned_cols=215 Identities=14% Similarity=0.112 Sum_probs=154.0
Q ss_pred EEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchh--hhhhhhCCceEEEccCChhhH--HhhccCceeeEEEEecCCCCC
Q 017914 62 MLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMK--KKELEQSGFDVHLFNANETAL--MILTTLKNYTHLLVSIPPLEG 136 (364)
Q Consensus 62 vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~--~~~l~~~~~~~~~~D~~~~~~--~~~~~~d~v~~~~~~~~~~~~ 136 (364)
|+|+| ||.+|+.+++.|++.+++|++++|+... ...+...+++++.+|+.|.+. .+++++|.|+.+.....
T Consensus 1 I~V~GatG~~G~~v~~~L~~~~~~V~~l~R~~~~~~~~~l~~~g~~vv~~d~~~~~~l~~al~g~d~v~~~~~~~~---- 76 (233)
T PF05368_consen 1 ILVTGATGNQGRSVVRALLSAGFSVRALVRDPSSDRAQQLQALGAEVVEADYDDPESLVAALKGVDAVFSVTPPSH---- 76 (233)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTGCEEEEESSSHHHHHHHHHHTTTEEEES-TT-HHHHHHHHTTCSEEEEESSCSC----
T ss_pred CEEECCccHHHHHHHHHHHhCCCCcEEEEeccchhhhhhhhcccceEeecccCCHHHHHHHHcCCceEEeecCcch----
Confidence 79999 9999999999999999999999998743 445666899999999999774 88999999987764321
Q ss_pred CCChhhhHHHHHHHHhhcCCccEEEEEccceeecCCCCccccCCCCCCCCChhHHHHHHHHHHHHHhhhhcCCcEEEEEe
Q 017914 137 TGDPMLKHGELLRSTLMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANPTTELGRLRLSAEKGWLNLGRDLGISAQVFRL 216 (364)
Q Consensus 137 ~~~~~~~~~~~l~~a~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilRp 216 (364)
+.......++++++++.|+++||+.|....+. +.....|..+.-..|...|+++++ .+++++++|+
T Consensus 77 --~~~~~~~~~li~Aa~~agVk~~v~ss~~~~~~--------~~~~~~p~~~~~~~k~~ie~~l~~----~~i~~t~i~~ 142 (233)
T PF05368_consen 77 --PSELEQQKNLIDAAKAAGVKHFVPSSFGADYD--------ESSGSEPEIPHFDQKAEIEEYLRE----SGIPYTIIRP 142 (233)
T ss_dssp --CCHHHHHHHHHHHHHHHT-SEEEESEESSGTT--------TTTTSTTHHHHHHHHHHHHHHHHH----CTSEBEEEEE
T ss_pred --hhhhhhhhhHHHhhhccccceEEEEEeccccc--------ccccccccchhhhhhhhhhhhhhh----ccccceeccc
Confidence 44556678999999999999999755433221 111222334455678888888864 4999999999
Q ss_pred cceecCCCChHHHHHHhcCccc----ccccccCCccccc-ccHHHHHHHHHHHccCCCC---CceEEEeCCCCCCHHHHH
Q 017914 217 GGIYGPGRSSVDTIIKQLPLSE----GQKMRRARQYTSR-IHVDDICQVLSASIDKPSA---WNVYNVVDDDPAPREEVF 288 (364)
Q Consensus 217 ~~v~g~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~-i~v~Dva~~~~~~l~~~~~---g~~~~i~~~~~~s~~el~ 288 (364)
|.++......+ ........ ....++++....+ ++.+|+|+++..++..+.. ++.+.+++ +.+|+.|++
T Consensus 143 g~f~e~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvg~~va~il~~p~~~~~~~~~~~~~-~~~t~~eia 218 (233)
T PF05368_consen 143 GFFMENLLPPF---APVVDIKKSKDVVTLPGPGNQKAVPVTDTRDVGRAVAAILLDPEKHNNGKTIFLAG-ETLTYNEIA 218 (233)
T ss_dssp -EEHHHHHTTT---HHTTCSCCTSSEEEEETTSTSEEEEEEHHHHHHHHHHHHHHSGGGTTEEEEEEEGG-GEEEHHHHH
T ss_pred cchhhhhhhhh---cccccccccceEEEEccCCCccccccccHHHHHHHHHHHHcChHHhcCCEEEEeCC-CCCCHHHHH
Confidence 98765322111 11111111 1223445545555 4999999999999998743 56777755 789999999
Q ss_pred HHHHHHhcCC
Q 017914 289 AYAWDLVEKK 298 (364)
Q Consensus 289 ~~i~~~~g~~ 298 (364)
+.+.+.+|++
T Consensus 219 ~~~s~~~G~~ 228 (233)
T PF05368_consen 219 AILSKVLGKK 228 (233)
T ss_dssp HHHHHHHTSE
T ss_pred HHHHHHHCCc
Confidence 9999999987
|
NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B .... |
| >PRK06482 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.85 E-value=2.1e-20 Score=165.69 Aligned_cols=218 Identities=14% Similarity=0.057 Sum_probs=151.0
Q ss_pred CCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhh---CCceEEEccCChhhH--Hhh-------ccCceee
Q 017914 59 PNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQ---SGFDVHLFNANETAL--MIL-------TTLKNYT 125 (364)
Q Consensus 59 ~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~---~~~~~~~~D~~~~~~--~~~-------~~~d~v~ 125 (364)
.++||||| +|+||++++++|+++|++|+++.|+.+....+.. .++.++.+|++|.+. ..+ ..+|.|+
T Consensus 2 ~k~vlVtGasg~IG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi 81 (276)
T PRK06482 2 SKTWFITGASSGFGRGMTERLLARGDRVAATVRRPDALDDLKARYGDRLWVLQLDVTDSAAVRAVVDRAFAALGRIDVVV 81 (276)
T ss_pred CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 47899999 9999999999999999999999998776554432 367889999999763 222 3579999
Q ss_pred EEEEecCCCCCCCC----h------hhhHHHHHHHHh----hcCCccEEEEEccceeecCCCCccccCCCCCCCCChhHH
Q 017914 126 HLLVSIPPLEGTGD----P------MLKHGELLRSTL----MNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANPTTELGR 191 (364)
Q Consensus 126 ~~~~~~~~~~~~~~----~------~~~~~~~l~~a~----~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~~ 191 (364)
|+++.......... . ......++..++ +..+.+++|++||...... ..+.+.|+.
T Consensus 82 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~-----------~~~~~~Y~~ 150 (276)
T PRK06482 82 SNAGYGLFGAAEELSDAQIRRQIDTNLIGSIQVIRAALPHLRRQGGGRIVQVSSEGGQIA-----------YPGFSLYHA 150 (276)
T ss_pred ECCCCCCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcCcccccC-----------CCCCchhHH
Confidence 99976543221111 1 111222444443 4556789999998653211 123478999
Q ss_pred HHHHHHHHHHHhhhh---cCCcEEEEEecce---ecCCCCh-----------HHHHHHhcCcccccccccCCcccccccH
Q 017914 192 LRLSAEKGWLNLGRD---LGISAQVFRLGGI---YGPGRSS-----------VDTIIKQLPLSEGQKMRRARQYTSRIHV 254 (364)
Q Consensus 192 sK~~~E~~~~~~~~~---~~~~~~ilRp~~v---~g~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~i~v 254 (364)
+|...|.+++.++++ .|++++++|||.+ ||.+... ...+... ...+. ..-+.++
T Consensus 151 sK~a~~~~~~~l~~~~~~~gi~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~-~~~~~d~ 221 (276)
T PRK06482 151 TKWGIEGFVEAVAQEVAPFGIEFTIVEPGPARTNFGAGLDRGAPLDAYDDTPVGDLRRA--------LADGS-FAIPGDP 221 (276)
T ss_pred HHHHHHHHHHHHHHHhhccCcEEEEEeCCccccCCcccccccCCCccccchhhHHHHHH--------Hhhcc-CCCCCCH
Confidence 999999999888754 5899999999987 4433110 0011110 00111 1124679
Q ss_pred HHHHHHHHHHccCCCCCceEEEeCCCCCCHHHHHHHHHHHhc
Q 017914 255 DDICQVLSASIDKPSAWNVYNVVDDDPAPREEVFAYAWDLVE 296 (364)
Q Consensus 255 ~Dva~~~~~~l~~~~~g~~~~i~~~~~~s~~el~~~i~~~~g 296 (364)
+|++++++.++..+..+..||+++++..+..|+++.+.+.++
T Consensus 222 ~~~~~a~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 263 (276)
T PRK06482 222 QKMVQAMIASADQTPAPRRLTLGSDAYASIRAALSERLAALE 263 (276)
T ss_pred HHHHHHHHHHHcCCCCCeEEecChHHHHHHHHHHHHHHHHHH
Confidence 999999999998876777899999988888888877777664
|
|
| >PRK13394 3-hydroxybutyrate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.6e-19 Score=158.76 Aligned_cols=213 Identities=11% Similarity=-0.012 Sum_probs=142.7
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhh----h--CCceEEEccCChhhH--Hhh-------cc
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELE----Q--SGFDVHLFNANETAL--MIL-------TT 120 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~----~--~~~~~~~~D~~~~~~--~~~-------~~ 120 (364)
..+++||||| +|+||++++++|+++|++|++++|++++...+. . ..+.++.+|++|.+. ..+ ..
T Consensus 5 ~~~~~vlItGasg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 84 (262)
T PRK13394 5 LNGKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKAGGKAIGVAMDVTNEDAVNAGIDKVAERFGS 84 (262)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHhcCceEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 3468999999 999999999999999999999999875543322 1 246678999999663 222 34
Q ss_pred CceeeEEEEecCCCCCCCChhh----hH----------HHHHHHHh-hcCCccEEEEEccceeecCCCCccccCCCCCCC
Q 017914 121 LKNYTHLLVSIPPLEGTGDPML----KH----------GELLRSTL-MNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANP 185 (364)
Q Consensus 121 ~d~v~~~~~~~~~~~~~~~~~~----~~----------~~~l~~a~-~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~ 185 (364)
+|+|+|+++..........+.. .. ..+++..+ +..+.+++|++||...+.. ..+
T Consensus 85 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~~~iv~~ss~~~~~~-----------~~~ 153 (262)
T PRK13394 85 VDILVSNAGIQIVNPIENYSFADWKKMQAIHVDGAFLTTKAALKHMYKDDRGGVVIYMGSVHSHEA-----------SPL 153 (262)
T ss_pred CCEEEECCccCCCCchhhCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhhcCCcEEEEEcchhhcCC-----------CCC
Confidence 8999999986543221111111 11 23455555 5667789999998643311 113
Q ss_pred CChhHHHHHHHHHHHHHhhhh---cCCcEEEEEecceecCCCC-hHHHHHHhcCccc----ccccccCCcccccccHHHH
Q 017914 186 TTELGRLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRS-SVDTIIKQLPLSE----GQKMRRARQYTSRIHVDDI 257 (364)
Q Consensus 186 ~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~-~~~~~~~~~~~~~----~~~~~~~~~~~~~i~v~Dv 257 (364)
...|+.+|...+.+++.++++ .+++++++|||.++++... .+........... ...+..+...++|++++|+
T Consensus 154 ~~~y~~sk~a~~~~~~~la~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv 233 (262)
T PRK13394 154 KSAYVTAKHGLLGLARVLAKEGAKHNVRSHVVCPGFVRTPLVDKQIPEQAKELGISEEEVVKKVMLGKTVDGVFTTVEDV 233 (262)
T ss_pred CcccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccchhhhhhhHhhhhccCCChHHHHHHHHhcCCCCCCCCCHHHH
Confidence 467999999999999888755 4799999999999987521 1111111110000 0011223445789999999
Q ss_pred HHHHHHHccCCCC---CceEEEeCCC
Q 017914 258 CQVLSASIDKPSA---WNVYNVVDDD 280 (364)
Q Consensus 258 a~~~~~~l~~~~~---g~~~~i~~~~ 280 (364)
+++++.++..... |+.|++.++.
T Consensus 234 a~a~~~l~~~~~~~~~g~~~~~~~g~ 259 (262)
T PRK13394 234 AQTVLFLSSFPSAALTGQSFVVSHGW 259 (262)
T ss_pred HHHHHHHcCccccCCcCCEEeeCCce
Confidence 9999999986533 7889988764
|
|
| >PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.4e-19 Score=169.56 Aligned_cols=220 Identities=12% Similarity=0.095 Sum_probs=148.6
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhh---------------CCceEEEccCChhhH--Hhh
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQ---------------SGFDVHLFNANETAL--MIL 118 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~---------------~~~~~~~~D~~~~~~--~~~ 118 (364)
..+++||||| +|+||++++++|+++|++|++++|+.++...+.. .++.++.+|++|.+. ..+
T Consensus 78 ~~gKvVLVTGATGgIG~aLAr~LLk~G~~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~esI~~aL 157 (576)
T PLN03209 78 KDEDLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPDQIGPAL 157 (576)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCCHHHHHHHh
Confidence 4567899999 9999999999999999999999998776543321 247789999999764 667
Q ss_pred ccCceeeEEEEecCCC-CCCC---ChhhhHHHHHHHHhhcCCccEEEEEccceeecCCCCccccCCCCCCCCChhHHHHH
Q 017914 119 TTLKNYTHLLVSIPPL-EGTG---DPMLKHGELLRSTLMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANPTTELGRLRL 194 (364)
Q Consensus 119 ~~~d~v~~~~~~~~~~-~~~~---~~~~~~~~~l~~a~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~~sK~ 194 (364)
.++|+|||+++..... ..+. ........|+++++...+++|||++||.+++.... .+ ........|...|.
T Consensus 158 ggiDiVVn~AG~~~~~v~d~~~~~~VN~~Gt~nLl~Aa~~agVgRIV~VSSiga~~~g~----p~-~~~~sk~~~~~~Kr 232 (576)
T PLN03209 158 GNASVVICCIGASEKEVFDVTGPYRIDYLATKNLVDAATVAKVNHFILVTSLGTNKVGF----PA-AILNLFWGVLCWKR 232 (576)
T ss_pred cCCCEEEEccccccccccchhhHHHHHHHHHHHHHHHHHHhCCCEEEEEccchhcccCc----cc-cchhhHHHHHHHHH
Confidence 8999999998653210 0011 11224567888888888899999999987531110 00 11223456778888
Q ss_pred HHHHHHHHhhhhcCCcEEEEEecceecCCCChHHHHHHhcCcccccccccCCcccccccHHHHHHHHHHHccCCC--CCc
Q 017914 195 SAEKGWLNLGRDLGISAQVFRLGGIYGPGRSSVDTIIKQLPLSEGQKMRRARQYTSRIHVDDICQVLSASIDKPS--AWN 272 (364)
Q Consensus 195 ~~E~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~--~g~ 272 (364)
.+|+.+. ..|+++++||||+++++....... ..+... ........++..+|||++++.++.++. .+.
T Consensus 233 aaE~~L~----~sGIrvTIVRPG~L~tp~d~~~~t----~~v~~~---~~d~~~gr~isreDVA~vVvfLasd~~as~~k 301 (576)
T PLN03209 233 KAEEALI----ASGLPYTIVRPGGMERPTDAYKET----HNLTLS---EEDTLFGGQVSNLQVAELMACMAKNRRLSYCK 301 (576)
T ss_pred HHHHHHH----HcCCCEEEEECCeecCCccccccc----cceeec---cccccCCCccCHHHHHHHHHHHHcCchhccce
Confidence 9888876 469999999999998764332100 000000 000111224889999999999998663 378
Q ss_pred eEEEeCCCCCCHHHHHHHHH
Q 017914 273 VYNVVDDDPAPREEVFAYAW 292 (364)
Q Consensus 273 ~~~i~~~~~~s~~el~~~i~ 292 (364)
+|.+.++.......+.+++.
T Consensus 302 vvevi~~~~~p~~~~~~~~~ 321 (576)
T PLN03209 302 VVEVIAETTAPLTPMEELLA 321 (576)
T ss_pred EEEEEeCCCCCCCCHHHHHH
Confidence 99999876443444444443
|
|
| >TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase | Back alignment and domain information |
|---|
Probab=99.83 E-value=3e-19 Score=156.39 Aligned_cols=211 Identities=9% Similarity=-0.068 Sum_probs=140.8
Q ss_pred CCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhh------CCceEEEccCChhhH---------HhhccCc
Q 017914 59 PNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQ------SGFDVHLFNANETAL---------MILTTLK 122 (364)
Q Consensus 59 ~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~------~~~~~~~~D~~~~~~---------~~~~~~d 122 (364)
+++||||| +|+||++++++|+++|++|++++|+.+....+.. .++.++.+|+.|.+. ..+..+|
T Consensus 1 ~~~vlItGa~g~lG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d 80 (255)
T TIGR01963 1 GKTALVTGAASGIGLAIALALAAAGANVVVNDLGEAGAEAAAKVATDAGGSVIYLVADVTKEDEIADMIAAAAAEFGGLD 80 (255)
T ss_pred CCEEEEcCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhcCCCC
Confidence 36899999 9999999999999999999999998765544321 357789999999762 1234579
Q ss_pred eeeEEEEecCCCCCCCChhh----hH----------HHHHHHHhhcCCccEEEEEccceeecCCCCccccCCCCCCCCCh
Q 017914 123 NYTHLLVSIPPLEGTGDPML----KH----------GELLRSTLMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANPTTE 188 (364)
Q Consensus 123 ~v~~~~~~~~~~~~~~~~~~----~~----------~~~l~~a~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~ 188 (364)
.|+|+++............. .. ..+++..+++.+++++|++||...+.... ....
T Consensus 81 ~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~~v~~ss~~~~~~~~-----------~~~~ 149 (255)
T TIGR01963 81 ILVNNAGIQHVAPIEEFPPEDWDRIIAIMLTSAFHTIRAALPHMKKQGWGRIINIASAHGLVASP-----------FKSA 149 (255)
T ss_pred EEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhcCCCC-----------CCch
Confidence 99999976543221111111 11 11233333556778999999875443211 2357
Q ss_pred hHHHHHHHHHHHHHhhhh---cCCcEEEEEecceecCCCC-hHHHHHHhcCcccc----cccccCCcccccccHHHHHHH
Q 017914 189 LGRLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRS-SVDTIIKQLPLSEG----QKMRRARQYTSRIHVDDICQV 260 (364)
Q Consensus 189 Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~-~~~~~~~~~~~~~~----~~~~~~~~~~~~i~v~Dva~~ 260 (364)
|+.+|...|.+++.++.+ .+++++++||+.++++... .+............ ..+..+.+.+++++++|+|++
T Consensus 150 y~~sk~a~~~~~~~~~~~~~~~~i~v~~i~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~ 229 (255)
T TIGR01963 150 YVAAKHGLIGLTKVLALEVAAHGITVNAICPGYVRTPLVEKQIADQAKTRGIPEEQVIREVMLPGQPTKRFVTVDEVAET 229 (255)
T ss_pred hHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccHHHHHHHHhhhcccCCCchHHHHHHHHccCccccCcCHHHHHHH
Confidence 999999999999877644 4899999999999887421 11111111111000 011224456789999999999
Q ss_pred HHHHccCCC---CCceEEEeCCC
Q 017914 261 LSASIDKPS---AWNVYNVVDDD 280 (364)
Q Consensus 261 ~~~~l~~~~---~g~~~~i~~~~ 280 (364)
++.+++... .|+.|++.+|.
T Consensus 230 ~~~~~~~~~~~~~g~~~~~~~g~ 252 (255)
T TIGR01963 230 ALFLASDAAAGITGQAIVLDGGW 252 (255)
T ss_pred HHHHcCccccCccceEEEEcCcc
Confidence 999998642 37899998764
|
This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species. |
| >PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.82 E-value=1.3e-18 Score=151.76 Aligned_cols=208 Identities=12% Similarity=-0.006 Sum_probs=138.9
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhh-hh----h--hCCceEEEccCChhhH--Hhh-------c
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKK-EL----E--QSGFDVHLFNANETAL--MIL-------T 119 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~l----~--~~~~~~~~~D~~~~~~--~~~-------~ 119 (364)
.++++||||| +|+||++|+++|+++|++|+++.|+..... .+ . ..++.++.+|+.|.+. ..+ .
T Consensus 4 ~~~~~vlItGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~ 83 (249)
T PRK12825 4 LMGRVALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVEALGRRAQAVQADVTDKAALEAAVAAAVERFG 83 (249)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCcCCHHHHHHHHHHHHHHcC
Confidence 3457999999 999999999999999999988887654321 11 1 1357889999998763 222 3
Q ss_pred cCceeeEEEEecCCCCCC--C--ChhhhH------HHHHHHHh----hcCCccEEEEEccceeecCCCCccccCCCCCCC
Q 017914 120 TLKNYTHLLVSIPPLEGT--G--DPMLKH------GELLRSTL----MNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANP 185 (364)
Q Consensus 120 ~~d~v~~~~~~~~~~~~~--~--~~~~~~------~~~l~~a~----~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~ 185 (364)
.+|.|+|+++........ . +..... ..++..++ +..+.+++|++||...+... ..
T Consensus 84 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~i~~SS~~~~~~~-----------~~ 152 (249)
T PRK12825 84 RIDILVNNAGIFEDKPLADMSDDEWDEVIDVNLSGVFHLLRAVVPPMRKQRGGRIVNISSVAGLPGW-----------PG 152 (249)
T ss_pred CCCEEEECCccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECccccCCCC-----------CC
Confidence 679999999854332210 1 011111 12233333 45678899999997765321 13
Q ss_pred CChhHHHHHHHHHHHHHhhhh---cCCcEEEEEecceecCCCChHHHHHHhcCcccccccccCCcccccccHHHHHHHHH
Q 017914 186 TTELGRLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRSSVDTIIKQLPLSEGQKMRRARQYTSRIHVDDICQVLS 262 (364)
Q Consensus 186 ~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~ 262 (364)
...|+.+|...|.+++.+++. .+++++++|||.++++............. .. ......+++.+|+++++.
T Consensus 153 ~~~y~~sK~~~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~~~~~~~~~-~~------~~~~~~~~~~~dva~~~~ 225 (249)
T PRK12825 153 RSNYAAAKAGLVGLTKALARELAEYGITVNMVAPGDIDTDMKEATIEEAREAK-DA------ETPLGRSGTPEDIARAVA 225 (249)
T ss_pred chHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECCccCCccccccchhHHhh-hc------cCCCCCCcCHHHHHHHHH
Confidence 367999999999999877654 58999999999999986432110000000 00 011223799999999999
Q ss_pred HHccCCC---CCceEEEeCCCCC
Q 017914 263 ASIDKPS---AWNVYNVVDDDPA 282 (364)
Q Consensus 263 ~~l~~~~---~g~~~~i~~~~~~ 282 (364)
.+++... .|++|+++++..+
T Consensus 226 ~~~~~~~~~~~g~~~~i~~g~~~ 248 (249)
T PRK12825 226 FLCSDASDYITGQVIEVTGGVDV 248 (249)
T ss_pred HHhCccccCcCCCEEEeCCCEee
Confidence 9997653 3899999988643
|
|
| >PRK12429 3-hydroxybutyrate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.82 E-value=1.3e-18 Score=152.66 Aligned_cols=211 Identities=9% Similarity=-0.079 Sum_probs=140.9
Q ss_pred CCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhh------hCCceEEEccCChhhH--Hhh-------ccC
Q 017914 58 SPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELE------QSGFDVHLFNANETAL--MIL-------TTL 121 (364)
Q Consensus 58 ~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~------~~~~~~~~~D~~~~~~--~~~-------~~~ 121 (364)
.+++||||| +|+||++++++|+++|++|++++|++++...+. ..++.++.+|++|.+. ..+ ..+
T Consensus 3 ~~~~vlItG~sg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~ 82 (258)
T PRK12429 3 KGKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKAGGKAIGVAMDVTDEEAINAGIDYAVETFGGV 82 (258)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 357999999 999999999999999999999999877654332 1357789999999763 222 358
Q ss_pred ceeeEEEEecCCCCCCCChhh--------------hHHHHHHHHhhcCCccEEEEEccceeecCCCCccccCCCCCCCCC
Q 017914 122 KNYTHLLVSIPPLEGTGDPML--------------KHGELLRSTLMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANPTT 187 (364)
Q Consensus 122 d~v~~~~~~~~~~~~~~~~~~--------------~~~~~l~~a~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~ 187 (364)
|+|+|+++..........+.. .....++..+++.+.++||++||...+.. ..+.+
T Consensus 83 d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~~~-----------~~~~~ 151 (258)
T PRK12429 83 DILVNNAGIQHVAPIEDFPTEKWKKMIAIMLDGAFLTTKAALPIMKAQGGGRIINMASVHGLVG-----------SAGKA 151 (258)
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCeEEEEEcchhhccC-----------CCCcc
Confidence 999999876443221111111 11234555555667889999998754322 12346
Q ss_pred hhHHHHHHHHHHHHHhhhh---cCCcEEEEEecceecCCCC-hHHHHHHhcCcccc----cccccCCcccccccHHHHHH
Q 017914 188 ELGRLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRS-SVDTIIKQLPLSEG----QKMRRARQYTSRIHVDDICQ 259 (364)
Q Consensus 188 ~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~-~~~~~~~~~~~~~~----~~~~~~~~~~~~i~v~Dva~ 259 (364)
.|+.+|...+.+++.++.+ .+++++++|||.++++... .+............ .........+.|++++|+|+
T Consensus 152 ~y~~~k~a~~~~~~~l~~~~~~~~i~v~~~~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~ 231 (258)
T PRK12429 152 AYVSAKHGLIGLTKVVALEGATHGVTVNAICPGYVDTPLVRKQIPDLAKERGISEEEVLEDVLLPLVPQKRFTTVEEIAD 231 (258)
T ss_pred hhHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCcchhhhhhhhhhccccCCChHHHHHHHHhccCCccccCCHHHHHH
Confidence 8999999999888877543 4799999999999886532 11111100000000 01112223467899999999
Q ss_pred HHHHHccCCC---CCceEEEeCC
Q 017914 260 VLSASIDKPS---AWNVYNVVDD 279 (364)
Q Consensus 260 ~~~~~l~~~~---~g~~~~i~~~ 279 (364)
+++.++.... .|+.|++.+|
T Consensus 232 ~~~~l~~~~~~~~~g~~~~~~~g 254 (258)
T PRK12429 232 YALFLASFAAKGVTGQAWVVDGG 254 (258)
T ss_pred HHHHHcCccccCccCCeEEeCCC
Confidence 9999987643 3788998876
|
|
| >PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed | Back alignment and domain information |
|---|
Probab=99.80 E-value=3.7e-18 Score=149.13 Aligned_cols=207 Identities=11% Similarity=-0.025 Sum_probs=137.9
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhh----hhh--CCceEEEccCChhhH--Hhh-------cc
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKE----LEQ--SGFDVHLFNANETAL--MIL-------TT 120 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~----l~~--~~~~~~~~D~~~~~~--~~~-------~~ 120 (364)
.++|+||||| +|++|++++++|+++|++|++++|+..+... +.. ..+.++.+|+.|.+. ..+ ..
T Consensus 4 ~~~~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 83 (251)
T PRK12826 4 LEGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAAGGKARARQVDVRDRAALKAAVAAGVEDFGR 83 (251)
T ss_pred CCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCC
Confidence 4567999999 9999999999999999999999998654332 222 247789999999763 222 36
Q ss_pred CceeeEEEEecCCCCCCC----ChhhhH------HHHHHHHh----hcCCccEEEEEccceeecCCCCccccCCCCCCCC
Q 017914 121 LKNYTHLLVSIPPLEGTG----DPMLKH------GELLRSTL----MNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANPT 186 (364)
Q Consensus 121 ~d~v~~~~~~~~~~~~~~----~~~~~~------~~~l~~a~----~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~ 186 (364)
+|+|+|+++......... +..... ..++..++ ...+.++||++||...++. +....
T Consensus 84 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~ss~~~~~~----------~~~~~ 153 (251)
T PRK12826 84 LDILVANAGIFPLTPFAEMDDEQWERVIDVNLTGTFLLTQAALPALIRAGGGRIVLTSSVAGPRV----------GYPGL 153 (251)
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechHhhcc----------CCCCc
Confidence 899999997655421111 111111 12233332 3455779999998765411 11234
Q ss_pred ChhHHHHHHHHHHHHHhhhh---cCCcEEEEEecceecCCCChHHH-HHHhcCcccccccccCCcccccccHHHHHHHHH
Q 017914 187 TELGRLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRSSVDT-IIKQLPLSEGQKMRRARQYTSRIHVDDICQVLS 262 (364)
Q Consensus 187 ~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~ 262 (364)
..|+.+|...|.+++.++.. .+++++++|||.++|+....... .... .+... .....+++++|+|++++
T Consensus 154 ~~y~~sK~a~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~~~~~~~~-~~~~~------~~~~~~~~~~dva~~~~ 226 (251)
T PRK12826 154 AHYAASKAGLVGFTRALALELAARNITVNSVHPGGVDTPMAGNLGDAQWAE-AIAAA------IPLGRLGEPEDIAAAVL 226 (251)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEeeCCCCcchhhhcCchHHHH-HHHhc------CCCCCCcCHHHHHHHHH
Confidence 67999999999999887654 48999999999999986332111 0000 00000 01124689999999999
Q ss_pred HHccCCC---CCceEEEeCCC
Q 017914 263 ASIDKPS---AWNVYNVVDDD 280 (364)
Q Consensus 263 ~~l~~~~---~g~~~~i~~~~ 280 (364)
.++.... .|++|++.+|.
T Consensus 227 ~l~~~~~~~~~g~~~~~~~g~ 247 (251)
T PRK12826 227 FLASDEARYITGQTLPVDGGA 247 (251)
T ss_pred HHhCccccCcCCcEEEECCCc
Confidence 9887653 48999998764
|
|
| >PRK07074 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.80 E-value=2.7e-18 Score=150.61 Aligned_cols=215 Identities=10% Similarity=0.001 Sum_probs=146.5
Q ss_pred CCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhh----hCCceEEEccCChhhH--Hhh-------ccCcee
Q 017914 59 PNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELE----QSGFDVHLFNANETAL--MIL-------TTLKNY 124 (364)
Q Consensus 59 ~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~----~~~~~~~~~D~~~~~~--~~~-------~~~d~v 124 (364)
++++|||| +|+||+++++.|+++|++|++++|+..+...+. ..++.++.+|+.|.+. ..+ ..+|.|
T Consensus 2 ~k~ilItGat~~iG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~v 81 (257)
T PRK07074 2 KRTALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFADALGDARFVPVACDLTDAASLAAALANAAAERGPVDVL 81 (257)
T ss_pred CCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 46899999 999999999999999999999999876654332 2357888999999764 233 247999
Q ss_pred eEEEEecCCCCCCCChhhh----HHHH------HH----HHhhcCCccEEEEEccceeecCCCCccccCCCCCCCCChhH
Q 017914 125 THLLVSIPPLEGTGDPMLK----HGEL------LR----STLMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANPTTELG 190 (364)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~~----~~~~------l~----~a~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~ 190 (364)
+|+++.............. ...| +. ..+.+.+.+++|++||...+... ....|+
T Consensus 82 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~------------~~~~y~ 149 (257)
T PRK07074 82 VANAGAARAASLHDTTPASWRADNALNLEAAYLCVEAVLEGMLKRSRGAVVNIGSVNGMAAL------------GHPAYS 149 (257)
T ss_pred EECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhcCCC------------CCcccH
Confidence 9999764432211111111 1112 22 22234556789999985432110 123699
Q ss_pred HHHHHHHHHHHHhhhhc---CCcEEEEEecceecCCCCh----HHHHHHhcCcccccccccCCcccccccHHHHHHHHHH
Q 017914 191 RLRLSAEKGWLNLGRDL---GISAQVFRLGGIYGPGRSS----VDTIIKQLPLSEGQKMRRARQYTSRIHVDDICQVLSA 263 (364)
Q Consensus 191 ~sK~~~E~~~~~~~~~~---~~~~~ilRp~~v~g~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~ 263 (364)
.+|.+.|.+++.++++. +++++++|||.++++.... ...+... .......++|++++|++++++.
T Consensus 150 ~sK~a~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~d~a~~~~~ 221 (257)
T PRK07074 150 AAKAGLIHYTKLLAVEYGRFGIRANAVAPGTVKTQAWEARVAANPQVFEE--------LKKWYPLQDFATPDDVANAVLF 221 (257)
T ss_pred HHHHHHHHHHHHHHHHHhHhCeEEEEEEeCcCCcchhhcccccChHHHHH--------HHhcCCCCCCCCHHHHHHHHHH
Confidence 99999999999987553 7999999999988764211 0011110 0011234678999999999999
Q ss_pred HccCCC---CCceEEEeCCCCCCHHHHHHHHHH
Q 017914 264 SIDKPS---AWNVYNVVDDDPAPREEVFAYAWD 293 (364)
Q Consensus 264 ~l~~~~---~g~~~~i~~~~~~s~~el~~~i~~ 293 (364)
++.... .|+++++.+|.....+|+.+.+.+
T Consensus 222 l~~~~~~~~~g~~~~~~~g~~~~~~~~~~~~~~ 254 (257)
T PRK07074 222 LASPAARAITGVCLPVDGGLTAGNREMARTLTL 254 (257)
T ss_pred HcCchhcCcCCcEEEeCCCcCcCChhhhhhhcc
Confidence 997532 388899999888999999877654
|
|
| >PRK07775 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.80 E-value=3.3e-18 Score=151.44 Aligned_cols=204 Identities=13% Similarity=0.083 Sum_probs=134.5
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhh------CCceEEEccCChhhH--Hhh-------cc
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQ------SGFDVHLFNANETAL--MIL-------TT 120 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~------~~~~~~~~D~~~~~~--~~~-------~~ 120 (364)
..++++|||| +|+||++++++|+++|++|++++|+.+....+.. ..+.++.+|+++.+. ..+ ..
T Consensus 8 ~~~~~vlVtGa~g~iG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 87 (274)
T PRK07775 8 PDRRPALVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKIRADGGEAVAFPLDVTDPDSVKSFVAQAEEALGE 87 (274)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence 3457899999 9999999999999999999999997665433221 246778899999764 222 35
Q ss_pred CceeeEEEEecCCCCCCCChhh----hHHH------HHHHHh----hcCCccEEEEEccceeecCCCCccccCCCCCCCC
Q 017914 121 LKNYTHLLVSIPPLEGTGDPML----KHGE------LLRSTL----MNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANPT 186 (364)
Q Consensus 121 ~d~v~~~~~~~~~~~~~~~~~~----~~~~------~l~~a~----~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~ 186 (364)
+|+++|+++............. .... ++..++ ...+..+||++||...|.... ..
T Consensus 88 id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~g~iv~isS~~~~~~~~-----------~~ 156 (274)
T PRK07775 88 IEVLVSGAGDTYFGKLHEISTEQFESQVQIHLVGANRLATAVLPGMIERRRGDLIFVGSDVALRQRP-----------HM 156 (274)
T ss_pred CCEEEECCCcCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECChHhcCCCC-----------Cc
Confidence 7999999976443221111111 1112 222222 234456899999976654221 23
Q ss_pred ChhHHHHHHHHHHHHHhhhhc---CCcEEEEEecceecCC-CCh----HHHHHHhcCcccccccccCCcccccccHHHHH
Q 017914 187 TELGRLRLSAEKGWLNLGRDL---GISAQVFRLGGIYGPG-RSS----VDTIIKQLPLSEGQKMRRARQYTSRIHVDDIC 258 (364)
Q Consensus 187 ~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilRp~~v~g~~-~~~----~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva 258 (364)
..|+.+|.+.|.+++.+++.. |++++++|||.+.+.. ... +..+..... . ......+.+++++|+|
T Consensus 157 ~~Y~~sK~a~~~l~~~~~~~~~~~gi~v~~v~pG~~~t~~~~~~~~~~~~~~~~~~~--~----~~~~~~~~~~~~~dva 230 (274)
T PRK07775 157 GAYGAAKAGLEAMVTNLQMELEGTGVRASIVHPGPTLTGMGWSLPAEVIGPMLEDWA--K----WGQARHDYFLRASDLA 230 (274)
T ss_pred chHHHHHHHHHHHHHHHHHHhcccCeEEEEEeCCcccCcccccCChhhhhHHHHHHH--H----hcccccccccCHHHHH
Confidence 579999999999999887543 8999999999875442 111 111111100 0 0112235689999999
Q ss_pred HHHHHHccCCCCCceEEEe
Q 017914 259 QVLSASIDKPSAWNVYNVV 277 (364)
Q Consensus 259 ~~~~~~l~~~~~g~~~~i~ 277 (364)
++++.+++++..+.+||+.
T Consensus 231 ~a~~~~~~~~~~~~~~~~~ 249 (274)
T PRK07775 231 RAITFVAETPRGAHVVNME 249 (274)
T ss_pred HHHHHHhcCCCCCCeeEEe
Confidence 9999999887666788875
|
|
| >PRK08263 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.80 E-value=1.3e-18 Score=154.12 Aligned_cols=223 Identities=12% Similarity=0.002 Sum_probs=147.5
Q ss_pred CCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhh---CCceEEEccCChhhH--Hhh-------ccCcee
Q 017914 58 SPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQ---SGFDVHLFNANETAL--MIL-------TTLKNY 124 (364)
Q Consensus 58 ~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~---~~~~~~~~D~~~~~~--~~~-------~~~d~v 124 (364)
++++||||| +|+||++++++|+++|++|++++|+.+....+.. ..+.++.+|++|.+. ..+ ..+|.+
T Consensus 2 ~~k~vlItGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~v 81 (275)
T PRK08263 2 MEKVWFITGASRGFGRAWTEAALERGDRVVATARDTATLADLAEKYGDRLLPLALDVTDRAAVFAAVETAVEHFGRLDIV 81 (275)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhccCCeeEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 357899999 9999999999999999999999998766544322 357788999999653 222 357999
Q ss_pred eEEEEecCCCCCCCCh----hhhHHHH----------HHHHhhcCCccEEEEEccceeecCCCCccccCCCCCCCCChhH
Q 017914 125 THLLVSIPPLEGTGDP----MLKHGEL----------LRSTLMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANPTTELG 190 (364)
Q Consensus 125 ~~~~~~~~~~~~~~~~----~~~~~~~----------l~~a~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~ 190 (364)
+|+++........... ......| ++..++..+.+++|++||...+.... ....|+
T Consensus 82 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~~~~~-----------~~~~Y~ 150 (275)
T PRK08263 82 VNNAGYGLFGMIEEVTESEARAQIDTNFFGALWVTQAVLPYLREQRSGHIIQISSIGGISAFP-----------MSGIYH 150 (275)
T ss_pred EECCCCccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhcCCCC-----------CccHHH
Confidence 9999865432211111 1111222 22223455677999999976553322 235799
Q ss_pred HHHHHHHHHHHHhhhh---cCCcEEEEEecceecCCCCh-------HHHHHHhcCcccccccccCCccccc-ccHHHHHH
Q 017914 191 RLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRSS-------VDTIIKQLPLSEGQKMRRARQYTSR-IHVDDICQ 259 (364)
Q Consensus 191 ~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~-i~v~Dva~ 259 (364)
.+|...+.+.+.++.+ .|++++++|||.+..+.... ...... +. ..+........+ ++++|+|+
T Consensus 151 ~sKaa~~~~~~~la~e~~~~gi~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~---~~--~~~~~~~~~~~~~~~p~dva~ 225 (275)
T PRK08263 151 ASKWALEGMSEALAQEVAEFGIKVTLVEPGGYSTDWAGTSAKRATPLDAYDT---LR--EELAEQWSERSVDGDPEAAAE 225 (275)
T ss_pred HHHHHHHHHHHHHHHHhhhhCcEEEEEecCCccCCccccccccCCCchhhhh---HH--HHHHHHHHhccCCCCHHHHHH
Confidence 9999999998887654 68999999999886653210 000000 00 000011112334 78999999
Q ss_pred HHHHHccCCCC-CceEEEeCCCCCCHHHHHHHHHHHhc
Q 017914 260 VLSASIDKPSA-WNVYNVVDDDPAPREEVFAYAWDLVE 296 (364)
Q Consensus 260 ~~~~~l~~~~~-g~~~~i~~~~~~s~~el~~~i~~~~g 296 (364)
+++.+++.+.. ++.|+..++..+++.++.+.+.+.-+
T Consensus 226 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (275)
T PRK08263 226 ALLKLVDAENPPLRLFLGSGVLDLAKADYERRLATWEE 263 (275)
T ss_pred HHHHHHcCCCCCeEEEeCchHHHHHHHHHHHHHHHHHH
Confidence 99999998755 44555445567999999988888643
|
|
| >PRK05875 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.79 E-value=6.9e-18 Score=149.63 Aligned_cols=221 Identities=11% Similarity=0.004 Sum_probs=146.9
Q ss_pred CCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhh--------CCceEEEccCChhhH--Hhh-------c
Q 017914 58 SPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQ--------SGFDVHLFNANETAL--MIL-------T 119 (364)
Q Consensus 58 ~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~--------~~~~~~~~D~~~~~~--~~~-------~ 119 (364)
.+++||||| +|+||+++++.|+++|++|++++|+.++...+.. .++.++.+|++|++. ..+ .
T Consensus 6 ~~k~vlItGasg~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 85 (276)
T PRK05875 6 QDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDEDQVARAVDAATAWHG 85 (276)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 458999999 8999999999999999999999998665433211 356788899998663 233 2
Q ss_pred cCceeeEEEEecCCCCCCC--C---hhhhHH------HHHHHHh----hcCCccEEEEEccceeecCCCCccccCCCCCC
Q 017914 120 TLKNYTHLLVSIPPLEGTG--D---PMLKHG------ELLRSTL----MNGHLQWLGYLSSTGVYGHSGGAWVDEDYPAN 184 (364)
Q Consensus 120 ~~d~v~~~~~~~~~~~~~~--~---~~~~~~------~~l~~a~----~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~ 184 (364)
.+|+++|+++......... + ...... .++..++ ...+..++|++||...+... .
T Consensus 86 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~sS~~~~~~~-----------~ 154 (276)
T PRK05875 86 RLHGVVHCAGGSETIGPITQIDSDAWRRTVDLNVNGTMYVLKHAARELVRGGGGSFVGISSIAASNTH-----------R 154 (276)
T ss_pred CCCEEEECCCcccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhcCCC-----------C
Confidence 6799999997543211111 1 111111 1222222 22344689999997654321 1
Q ss_pred CCChhHHHHHHHHHHHHHhhhhc---CCcEEEEEecceecCCCChH---HHHHHhcCcccccccccCCcccccccHHHHH
Q 017914 185 PTTELGRLRLSAEKGWLNLGRDL---GISAQVFRLGGIYGPGRSSV---DTIIKQLPLSEGQKMRRARQYTSRIHVDDIC 258 (364)
Q Consensus 185 ~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilRp~~v~g~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva 258 (364)
+.+.|+.+|...|.+++.++.+. +++++++|||.+.++..... ...... +. .......+++++|+|
T Consensus 155 ~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~--~~------~~~~~~~~~~~~dva 226 (276)
T PRK05875 155 WFGAYGVTKSAVDHLMKLAADELGPSWVRVNSIRPGLIRTDLVAPITESPELSAD--YR------ACTPLPRVGEVEDVA 226 (276)
T ss_pred CCcchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCccCCccccccccCHHHHHH--HH------cCCCCCCCcCHHHHH
Confidence 34689999999999999887543 69999999998876532110 000000 00 011123357899999
Q ss_pred HHHHHHccCCC---CCceEEEeCCCCC----CHHHHHHHHHHHhcC
Q 017914 259 QVLSASIDKPS---AWNVYNVVDDDPA----PREEVFAYAWDLVEK 297 (364)
Q Consensus 259 ~~~~~~l~~~~---~g~~~~i~~~~~~----s~~el~~~i~~~~g~ 297 (364)
++++.+++.+. .|++|++.++..+ +..|+++.+.+..|.
T Consensus 227 ~~~~~l~~~~~~~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 272 (276)
T PRK05875 227 NLAMFLLSDAASWITGQVINVDGGHMLRRGPDFSSMLEPVFGADGL 272 (276)
T ss_pred HHHHHHcCchhcCcCCCEEEECCCeeccCCccHHHHHHHHhhHHHH
Confidence 99999998764 3899999998776 778888877766554
|
|
| >COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.79 E-value=2.5e-17 Score=145.87 Aligned_cols=216 Identities=17% Similarity=0.154 Sum_probs=161.1
Q ss_pred CeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCChhhH--HhhccCceeeEEEEecCCCCC
Q 017914 60 NRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETAL--MILTTLKNYTHLLVSIPPLEG 136 (364)
Q Consensus 60 ~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~--~~~~~~d~v~~~~~~~~~~~~ 136 (364)
|+||||| ||++|++++++|+++|++|++++|+++....+. .++++..+|+.+++. ..+.+++.++++..... ...
T Consensus 1 ~~ilV~GatG~~G~~~~~~L~~~~~~v~~~~r~~~~~~~~~-~~v~~~~~d~~~~~~l~~a~~G~~~~~~i~~~~~-~~~ 78 (275)
T COG0702 1 MKILVTGATGFVGGAVVRELLARGHEVRAAVRNPEAAAALA-GGVEVVLGDLRDPKSLVAGAKGVDGVLLISGLLD-GSD 78 (275)
T ss_pred CeEEEEecccchHHHHHHHHHhCCCEEEEEEeCHHHHHhhc-CCcEEEEeccCCHhHHHHHhccccEEEEEecccc-ccc
Confidence 5899999 999999999999999999999999999988887 889999999999885 67789999988887544 221
Q ss_pred CCChhhhHHHHHHHHhhc--CCccEEEEEccceeecCCCCccccCCCCCCCCChhHHHHHHHHHHHHHhhhhcCCcEEEE
Q 017914 137 TGDPMLKHGELLRSTLMN--GHLQWLGYLSSTGVYGHSGGAWVDEDYPANPTTELGRLRLSAEKGWLNLGRDLGISAQVF 214 (364)
Q Consensus 137 ~~~~~~~~~~~l~~a~~~--~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~il 214 (364)
........++...++. .++++++++|...... .....|..+|...|..+. ..|++++++
T Consensus 79 --~~~~~~~~~~~~~a~~a~~~~~~~~~~s~~~~~~-------------~~~~~~~~~~~~~e~~l~----~sg~~~t~l 139 (275)
T COG0702 79 --AFRAVQVTAVVRAAEAAGAGVKHGVSLSVLGADA-------------ASPSALARAKAAVEAALR----SSGIPYTTL 139 (275)
T ss_pred --chhHHHHHHHHHHHHHhcCCceEEEEeccCCCCC-------------CCccHHHHHHHHHHHHHH----hcCCCeEEE
Confidence 1122222344444443 3578899888754321 133579999999999987 468999999
Q ss_pred EecceecCCCChHHHHHHhcCcccccccccCCcccccccHHHHHHHHHHHccCC-CCCceEEEeCCCCCCHHHHHHHHHH
Q 017914 215 RLGGIYGPGRSSVDTIIKQLPLSEGQKMRRARQYTSRIHVDDICQVLSASIDKP-SAWNVYNVVDDDPAPREEVFAYAWD 293 (364)
Q Consensus 215 Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~-~~g~~~~i~~~~~~s~~el~~~i~~ 293 (364)
|+..+|................... . .+....+++..+|++.++...+..+ ..+++|.+++++..+..++.+.+.+
T Consensus 140 r~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~i~~~d~a~~~~~~l~~~~~~~~~~~l~g~~~~~~~~~~~~l~~ 216 (275)
T COG0702 140 RRAAFYLGAGAAFIEAAEAAGLPVI-P--RGIGRLSPIAVDDVAEALAAALDAPATAGRTYELAGPEALTLAELASGLDY 216 (275)
T ss_pred ecCeeeeccchhHHHHHHhhCCcee-c--CCCCceeeeEHHHHHHHHHHHhcCCcccCcEEEccCCceecHHHHHHHHHH
Confidence 9777766554432111111111111 1 1112567899999999999999877 5588999999999999999999999
Q ss_pred HhcCCC
Q 017914 294 LVEKKW 299 (364)
Q Consensus 294 ~~g~~~ 299 (364)
..|++.
T Consensus 217 ~~gr~~ 222 (275)
T COG0702 217 TIGRPV 222 (275)
T ss_pred HhCCcc
Confidence 999883
|
|
| >PRK06180 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.79 E-value=1e-17 Score=148.49 Aligned_cols=207 Identities=12% Similarity=0.071 Sum_probs=134.3
Q ss_pred CCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhh---CCceEEEccCChhhH--Hhh-------ccCcee
Q 017914 58 SPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQ---SGFDVHLFNANETAL--MIL-------TTLKNY 124 (364)
Q Consensus 58 ~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~---~~~~~~~~D~~~~~~--~~~-------~~~d~v 124 (364)
++++||||| +|+||++++++|+++|++|++++|++++...+.. .++..+.+|++|.+. ..+ ..+|+|
T Consensus 3 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~~~d~v 82 (277)
T PRK06180 3 SMKTWLITGVSSGFGRALAQAALAAGHRVVGTVRSEAARADFEALHPDRALARLLDVTDFDAIDAVVADAEATFGPIDVL 82 (277)
T ss_pred CCCEEEEecCCChHHHHHHHHHHhCcCEEEEEeCCHHHHHHHHhhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCCCEE
Confidence 357899999 9999999999999999999999998876655433 357788999999764 222 257999
Q ss_pred eEEEEecCCCCCCCChhh----hHHH------HHHHH----hhcCCccEEEEEccceeecCCCCccccCCCCCCCCChhH
Q 017914 125 THLLVSIPPLEGTGDPML----KHGE------LLRST----LMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANPTTELG 190 (364)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~----~~~~------~l~~a----~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~ 190 (364)
+|+++..........+.. .... ++..+ ++..+.+++|++||.+.+... .+...|+
T Consensus 83 v~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~iSS~~~~~~~-----------~~~~~Y~ 151 (277)
T PRK06180 83 VNNAGYGHEGAIEESPLAEMRRQFEVNVFGAVAMTKAVLPGMRARRRGHIVNITSMGGLITM-----------PGIGYYC 151 (277)
T ss_pred EECCCccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCCEEEEEecccccCCC-----------CCcchhH
Confidence 999986433221111111 1122 33333 334556799999997644221 1346899
Q ss_pred HHHHHHHHHHHHhhhh---cCCcEEEEEecceecCCCC--------hHHHHHHh-cCcccccccccCCcccccccHHHHH
Q 017914 191 RLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRS--------SVDTIIKQ-LPLSEGQKMRRARQYTSRIHVDDIC 258 (364)
Q Consensus 191 ~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~--------~~~~~~~~-~~~~~~~~~~~~~~~~~~i~v~Dva 258 (364)
.+|...|.+++.++.+ .|++++++|||.+.++..+ ....+... ...........+ ..+..++|+|
T Consensus 152 ~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~dva 228 (277)
T PRK06180 152 GSKFALEGISESLAKEVAPFGIHVTAVEPGSFRTDWAGRSMVRTPRSIADYDALFGPIRQAREAKSG---KQPGDPAKAA 228 (277)
T ss_pred HHHHHHHHHHHHHHHHhhhhCcEEEEEecCCcccCccccccccCCCCcHhHHHHHHHHHHHHHhhcc---CCCCCHHHHH
Confidence 9999999999887654 5899999999998765311 01111100 000000000111 2346799999
Q ss_pred HHHHHHccCCCCCceEEEeC
Q 017914 259 QVLSASIDKPSAWNVYNVVD 278 (364)
Q Consensus 259 ~~~~~~l~~~~~g~~~~i~~ 278 (364)
++++.+++.+..+..|.++.
T Consensus 229 ~~~~~~l~~~~~~~~~~~g~ 248 (277)
T PRK06180 229 QAILAAVESDEPPLHLLLGS 248 (277)
T ss_pred HHHHHHHcCCCCCeeEeccH
Confidence 99999999876654554443
|
|
| >PRK12828 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.78 E-value=1.6e-17 Score=143.93 Aligned_cols=198 Identities=10% Similarity=0.025 Sum_probs=136.5
Q ss_pred CCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhh----hhhhCCceEEEccCChhhH--Hhh-------ccCce
Q 017914 58 SPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKK----ELEQSGFDVHLFNANETAL--MIL-------TTLKN 123 (364)
Q Consensus 58 ~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~----~l~~~~~~~~~~D~~~~~~--~~~-------~~~d~ 123 (364)
.+++||||| +|+||++++++|+++|++|++++|++.+.. .+...+.+++.+|+.|.+. ..+ ..+|+
T Consensus 6 ~~k~vlItGatg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~ 85 (239)
T PRK12828 6 QGKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGVPADALRIGGIDLVDPQAARRAVDEVNRQFGRLDA 85 (239)
T ss_pred CCCEEEEECCCCcHhHHHHHHHHHCCCeEEEEeCChHhHHHHHHHHhhcCceEEEeecCCHHHHHHHHHHHHHHhCCcCE
Confidence 457999999 999999999999999999999999765532 2333567888999998653 222 36899
Q ss_pred eeEEEEecCCCCCCCChhh----------hHHHHHHHH----hhcCCccEEEEEccceeecCCCCccccCCCCCCCCChh
Q 017914 124 YTHLLVSIPPLEGTGDPML----------KHGELLRST----LMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANPTTEL 189 (364)
Q Consensus 124 v~~~~~~~~~~~~~~~~~~----------~~~~~l~~a----~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y 189 (364)
|+|+++............. ....++..+ +...+++++|++||...++.. .+...|
T Consensus 86 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~-----------~~~~~y 154 (239)
T PRK12828 86 LVNIAGAFVWGTIADGDADTWDRMYGVNVKTTLNASKAALPALTASGGGRIVNIGAGAALKAG-----------PGMGAY 154 (239)
T ss_pred EEECCcccCcCChhhCCHHHHHHHHHhhchhHHHHHHHHHHHHHhcCCCEEEEECchHhccCC-----------CCcchh
Confidence 9999876433211111111 111223332 235568899999998766432 134579
Q ss_pred HHHHHHHHHHHHHhhhh---cCCcEEEEEecceecCCCChHHHHHHhcCcccccccccCCcccccccHHHHHHHHHHHcc
Q 017914 190 GRLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRSSVDTIIKQLPLSEGQKMRRARQYTSRIHVDDICQVLSASID 266 (364)
Q Consensus 190 ~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~ 266 (364)
+.+|...+.+++.++.. .+++++++|||.++++.... ... ......|++++|+|++++.++.
T Consensus 155 ~~sk~a~~~~~~~~a~~~~~~~i~~~~i~pg~v~~~~~~~--------~~~-------~~~~~~~~~~~dva~~~~~~l~ 219 (239)
T PRK12828 155 AAAKAGVARLTEALAAELLDRGITVNAVLPSIIDTPPNRA--------DMP-------DADFSRWVTPEQIAAVIAFLLS 219 (239)
T ss_pred HHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCcchhh--------cCC-------chhhhcCCCHHHHHHHHHHHhC
Confidence 99999999988877643 48999999999998863110 000 0112336999999999999998
Q ss_pred CCC---CCceEEEeCCCC
Q 017914 267 KPS---AWNVYNVVDDDP 281 (364)
Q Consensus 267 ~~~---~g~~~~i~~~~~ 281 (364)
+.. .|+.+++.+++.
T Consensus 220 ~~~~~~~g~~~~~~g~~~ 237 (239)
T PRK12828 220 DEAQAITGASIPVDGGVA 237 (239)
T ss_pred cccccccceEEEecCCEe
Confidence 653 378888888754
|
|
| >PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=99.78 E-value=1.8e-17 Score=144.20 Aligned_cols=206 Identities=12% Similarity=0.002 Sum_probs=138.1
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhh------hCCceEEEccCChhhH--Hhh-------cc
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELE------QSGFDVHLFNANETAL--MIL-------TT 120 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~------~~~~~~~~~D~~~~~~--~~~-------~~ 120 (364)
+++++||||| +|+||++++++|+++|++|++++|++.+...+. ...+.++.+|++|++. ..+ ..
T Consensus 3 ~~~~~ilItGasg~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 82 (246)
T PRK05653 3 LQGKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAAGGEARVLVFDVSDEAAVRALIEAAVEAFGA 82 (246)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 3457999999 999999999999999999999999876543321 1346788899999763 222 34
Q ss_pred CceeeEEEEecCCCCCCCCh----hh------hHHHHHHHHh----hcCCccEEEEEccceeecCCCCccccCCCCCCCC
Q 017914 121 LKNYTHLLVSIPPLEGTGDP----ML------KHGELLRSTL----MNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANPT 186 (364)
Q Consensus 121 ~d~v~~~~~~~~~~~~~~~~----~~------~~~~~l~~a~----~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~ 186 (364)
+|+|+|+++........... .. ....++..++ ...+++++|++||..... +..+.
T Consensus 83 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~~ss~~~~~-----------~~~~~ 151 (246)
T PRK05653 83 LDILVNNAGITRDALLPRMSEEDWDRVIDVNLTGTFNVVRAALPPMIKARYGRIVNISSVSGVT-----------GNPGQ 151 (246)
T ss_pred CCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhcc-----------CCCCC
Confidence 69999999764432111100 11 1112333333 356678999999864321 11234
Q ss_pred ChhHHHHHHHHHHHHHhhhh---cCCcEEEEEecceecCCCChHHHHHHhcCcccccccccCCcccccccHHHHHHHHHH
Q 017914 187 TELGRLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRSSVDTIIKQLPLSEGQKMRRARQYTSRIHVDDICQVLSA 263 (364)
Q Consensus 187 ~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~ 263 (364)
..|+.+|...|.+++.+++. .+++++++|||.++++....+.......... ......+++++|+++++..
T Consensus 152 ~~y~~sk~~~~~~~~~l~~~~~~~~i~~~~i~pg~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~dva~~~~~ 224 (246)
T PRK05653 152 TNYSAAKAGVIGFTKALALELASRGITVNAVAPGFIDTDMTEGLPEEVKAEILK-------EIPLGRLGQPEEVANAVAF 224 (246)
T ss_pred cHhHhHHHHHHHHHHHHHHHHhhcCeEEEEEEeCCcCCcchhhhhHHHHHHHHh-------cCCCCCCcCHHHHHHHHHH
Confidence 67999999999998887653 4799999999999987654322211110000 0112456889999999999
Q ss_pred HccCCC---CCceEEEeCCC
Q 017914 264 SIDKPS---AWNVYNVVDDD 280 (364)
Q Consensus 264 ~l~~~~---~g~~~~i~~~~ 280 (364)
++.... .|++|++.+|.
T Consensus 225 ~~~~~~~~~~g~~~~~~gg~ 244 (246)
T PRK05653 225 LASDAASYITGQVIPVNGGM 244 (246)
T ss_pred HcCchhcCccCCEEEeCCCe
Confidence 997642 37899998875
|
|
| >PRK09135 pteridine reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.78 E-value=2.5e-17 Score=143.72 Aligned_cols=208 Identities=13% Similarity=0.083 Sum_probs=132.9
Q ss_pred CCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchh-hhhh----h---hCCceEEEccCChhhH--Hhh-------c
Q 017914 58 SPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMK-KKEL----E---QSGFDVHLFNANETAL--MIL-------T 119 (364)
Q Consensus 58 ~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~-~~~l----~---~~~~~~~~~D~~~~~~--~~~-------~ 119 (364)
++++||||| +|+||++++++|+++|++|++++|+..+ .+.+ . ...+.++.+|++|.+. ..+ .
T Consensus 5 ~~~~vlItGa~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 84 (249)
T PRK09135 5 SAKVALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALAAELNALRPGSAAALQADLLDPDALPELVAACVAAFG 84 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 447899999 9999999999999999999999986432 2221 1 1347789999999663 223 3
Q ss_pred cCceeeEEEEecCCCCCC----CCh------hhhHHHHHHHHhhc---CCccEEEEEccceeecCCCCccccCCCCCCCC
Q 017914 120 TLKNYTHLLVSIPPLEGT----GDP------MLKHGELLRSTLMN---GHLQWLGYLSSTGVYGHSGGAWVDEDYPANPT 186 (364)
Q Consensus 120 ~~d~v~~~~~~~~~~~~~----~~~------~~~~~~~l~~a~~~---~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~ 186 (364)
.+|.|+|+++........ .+. ......++.+++.. .....++++++. .+..+..+.
T Consensus 85 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~ 153 (249)
T PRK09135 85 RLDALVNNASSFYPTPLGSITEAQWDDLFASNLKAPFFLSQAAAPQLRKQRGAIVNITDI-----------HAERPLKGY 153 (249)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhchhHHHHHHHHHHHHhhCCeEEEEEeCh-----------hhcCCCCCc
Confidence 579999998754322111 111 11222345554431 112356555542 122345567
Q ss_pred ChhHHHHHHHHHHHHHhhhhc--CCcEEEEEecceecCCCCh-HHHHHHhcCcccccccccCCcccccccHHHHHHHHHH
Q 017914 187 TELGRLRLSAEKGWLNLGRDL--GISAQVFRLGGIYGPGRSS-VDTIIKQLPLSEGQKMRRARQYTSRIHVDDICQVLSA 263 (364)
Q Consensus 187 ~~Y~~sK~~~E~~~~~~~~~~--~~~~~ilRp~~v~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~ 263 (364)
..|+.+|..+|.+++.++++. +++++++|||.++++.... +.......... .. ....+.+++|+|+++..
T Consensus 154 ~~Y~~sK~~~~~~~~~l~~~~~~~i~~~~v~pg~~~~~~~~~~~~~~~~~~~~~-~~------~~~~~~~~~d~a~~~~~ 226 (249)
T PRK09135 154 PVYCAAKAALEMLTRSLALELAPEVRVNAVAPGAILWPEDGNSFDEEARQAILA-RT------PLKRIGTPEDIAEAVRF 226 (249)
T ss_pred hhHHHHHHHHHHHHHHHHHHHCCCCeEEEEEeccccCccccccCCHHHHHHHHh-cC------CcCCCcCHHHHHHHHHH
Confidence 899999999999999987654 6999999999999987431 11111110000 00 01112458999999966
Q ss_pred HccCC--CCCceEEEeCCCCCC
Q 017914 264 SIDKP--SAWNVYNVVDDDPAP 283 (364)
Q Consensus 264 ~l~~~--~~g~~~~i~~~~~~s 283 (364)
++... ..|++|+++++..++
T Consensus 227 ~~~~~~~~~g~~~~i~~g~~~~ 248 (249)
T PRK09135 227 LLADASFITGQILAVDGGRSLT 248 (249)
T ss_pred HcCccccccCcEEEECCCeecc
Confidence 66443 358899999987654
|
|
| >PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.78 E-value=2e-17 Score=144.50 Aligned_cols=210 Identities=8% Similarity=-0.124 Sum_probs=137.2
Q ss_pred CCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhh-----CCceEEEccCChhhH--Hhh-------ccCc
Q 017914 58 SPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQ-----SGFDVHLFNANETAL--MIL-------TTLK 122 (364)
Q Consensus 58 ~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~-----~~~~~~~~D~~~~~~--~~~-------~~~d 122 (364)
.+++||||| +|+||++++++|+++|++|++++|+..+...+.. ..+.++.+|+.|++. ..+ ..+|
T Consensus 4 ~~~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d 83 (251)
T PRK07231 4 EGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILAGGRAIAVAADVSDEADVEAAVAAALERFGSVD 83 (251)
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCCC
Confidence 457999999 9999999999999999999999998766544321 246789999999764 222 3579
Q ss_pred eeeEEEEecCCCCCCCC-----hhhh----------HHHHHHHHhhcCCccEEEEEccceeecCCCCccccCCCCCCCCC
Q 017914 123 NYTHLLVSIPPLEGTGD-----PMLK----------HGELLRSTLMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANPTT 187 (364)
Q Consensus 123 ~v~~~~~~~~~~~~~~~-----~~~~----------~~~~l~~a~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~ 187 (364)
+|+|+++.........+ .... ...++...+.+.+.++||++||...+... .+..
T Consensus 84 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~-----------~~~~ 152 (251)
T PRK07231 84 ILVNNAGTTHRNGPLLDVDEAEFDRIFAVNVKSPYLWTQAAVPAMRGEGGGAIVNVASTAGLRPR-----------PGLG 152 (251)
T ss_pred EEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhcCCC-----------CCch
Confidence 99999876433221111 1111 12333444445667899999997665432 2346
Q ss_pred hhHHHHHHHHHHHHHhhhh---cCCcEEEEEecceecCCCChHHHHHHhcCcccccccccCCcccccccHHHHHHHHHHH
Q 017914 188 ELGRLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRSSVDTIIKQLPLSEGQKMRRARQYTSRIHVDDICQVLSAS 264 (364)
Q Consensus 188 ~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~ 264 (364)
.|+.+|...+.+++.++.+ .+++++.++||.+.++..... ...........+........+++++|+|.+++.+
T Consensus 153 ~y~~sk~~~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l 229 (251)
T PRK07231 153 WYNASKGAVITLTKALAAELGPDKIRVNAVAPVVVETGLLEAF---MGEPTPENRAKFLATIPLGRLGTPEDIANAALFL 229 (251)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEECccCCCcchhh---hcccChHHHHHHhcCCCCCCCcCHHHHHHHHHHH
Confidence 7999999999998888754 379999999998865432111 0000000000000111223468999999999999
Q ss_pred ccCCC---CCceEEEeCCCC
Q 017914 265 IDKPS---AWNVYNVVDDDP 281 (364)
Q Consensus 265 l~~~~---~g~~~~i~~~~~ 281 (364)
+.... .|+.+.+.++..
T Consensus 230 ~~~~~~~~~g~~~~~~gg~~ 249 (251)
T PRK07231 230 ASDEASWITGVTLVVDGGRC 249 (251)
T ss_pred hCccccCCCCCeEEECCCcc
Confidence 97653 277778776543
|
|
| >PRK06182 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.78 E-value=1.9e-17 Score=146.58 Aligned_cols=210 Identities=15% Similarity=0.073 Sum_probs=137.3
Q ss_pred CCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCChhhH--Hhh-------ccCceeeEEE
Q 017914 59 PNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETAL--MIL-------TTLKNYTHLL 128 (364)
Q Consensus 59 ~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~--~~~-------~~~d~v~~~~ 128 (364)
+++|+||| +|+||++++++|+++|++|++++|+.++...+...++.++.+|++|.+. ..+ .++|.++|++
T Consensus 3 ~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~l~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~id~li~~a 82 (273)
T PRK06182 3 KKVALVTGASSGIGKATARRLAAQGYTVYGAARRVDKMEDLASLGVHPLSLDVTDEASIKAAVDTIIAEEGRIDVLVNNA 82 (273)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhCCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEECC
Confidence 57999999 9999999999999999999999999877766655678999999999764 222 2689999998
Q ss_pred EecCCCCCCC----ChhhhH----------HHHHHHHhhcCCccEEEEEccceeecCCCCccccCCCCCCCCChhHHHHH
Q 017914 129 VSIPPLEGTG----DPMLKH----------GELLRSTLMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANPTTELGRLRL 194 (364)
Q Consensus 129 ~~~~~~~~~~----~~~~~~----------~~~l~~a~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~~sK~ 194 (364)
+......... +..... ...++..+++.+.+++|++||.+.+... .....|+.+|.
T Consensus 83 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~-----------~~~~~Y~~sKa 151 (273)
T PRK06182 83 GYGSYGAIEDVPIDEARRQFEVNLFGAARLTQLVLPHMRAQRSGRIINISSMGGKIYT-----------PLGAWYHATKF 151 (273)
T ss_pred CcCCCCchhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhhcCCC-----------CCccHhHHHHH
Confidence 7543221111 111111 2334444556667799999986432111 12246999999
Q ss_pred HHHHHHHHhh---hhcCCcEEEEEecceecCCCChHHHHHHhcCccc--c-------cccccCCcccccccHHHHHHHHH
Q 017914 195 SAEKGWLNLG---RDLGISAQVFRLGGIYGPGRSSVDTIIKQLPLSE--G-------QKMRRARQYTSRIHVDDICQVLS 262 (364)
Q Consensus 195 ~~E~~~~~~~---~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~--~-------~~~~~~~~~~~~i~v~Dva~~~~ 262 (364)
..+.+.+.++ ...|+++++++||.+.++................ . ..+........+.+.+|+|++++
T Consensus 152 a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vA~~i~ 231 (273)
T PRK06182 152 ALEGFSDALRLEVAPFGIDVVVIEPGGIKTEWGDIAADHLLKTSGNGAYAEQAQAVAASMRSTYGSGRLSDPSVIADAIS 231 (273)
T ss_pred HHHHHHHHHHHHhcccCCEEEEEecCCcccccchhhhhhhcccccccchHHHHHHHHHHHHHhhccccCCCHHHHHHHHH
Confidence 9999877665 3458999999999998764321111110000000 0 00001111234578999999999
Q ss_pred HHccCCCCCceEEEeCC
Q 017914 263 ASIDKPSAWNVYNVVDD 279 (364)
Q Consensus 263 ~~l~~~~~g~~~~i~~~ 279 (364)
.++........|+++.+
T Consensus 232 ~~~~~~~~~~~~~~g~~ 248 (273)
T PRK06182 232 KAVTARRPKTRYAVGFG 248 (273)
T ss_pred HHHhCCCCCceeecCcc
Confidence 99987655557776543
|
|
| >PRK06914 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.77 E-value=1.9e-17 Score=147.15 Aligned_cols=216 Identities=10% Similarity=0.002 Sum_probs=137.7
Q ss_pred CCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhh--------CCceEEEccCChhhH-Hhh-------cc
Q 017914 58 SPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQ--------SGFDVHLFNANETAL-MIL-------TT 120 (364)
Q Consensus 58 ~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~--------~~~~~~~~D~~~~~~-~~~-------~~ 120 (364)
+++++|||| +|+||+++++.|+++|++|++++|+++....+.. .++.++.+|++|++. ..+ ..
T Consensus 2 ~~k~~lItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~ 81 (280)
T PRK06914 2 NKKIAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHNFQLVLKEIGR 81 (280)
T ss_pred CCCEEEEECCCchHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHHHHHHHHhcCC
Confidence 346899999 9999999999999999999999998765443321 357889999999763 112 35
Q ss_pred CceeeEEEEecCCCCCCCChhh----hH------HHHHHHH----hhcCCccEEEEEcccee-ecCCCCccccCCCCCCC
Q 017914 121 LKNYTHLLVSIPPLEGTGDPML----KH------GELLRST----LMNGHLQWLGYLSSTGV-YGHSGGAWVDEDYPANP 185 (364)
Q Consensus 121 ~d~v~~~~~~~~~~~~~~~~~~----~~------~~~l~~a----~~~~~~~r~v~~Ss~~v-y~~~~~~~~~E~~~~~~ 185 (364)
+|+|+|+++............. .. ..++..+ ++..+.+++|++||... ++. .+
T Consensus 82 id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~~~~------------~~ 149 (280)
T PRK06914 82 IDLLVNNAGYANGGFVEEIPVEEYRKQFETNVFGAISVTQAVLPYMRKQKSGKIINISSISGRVGF------------PG 149 (280)
T ss_pred eeEEEECCcccccCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECcccccCCC------------CC
Confidence 6999999876443221111111 11 1122222 45566779999998643 321 23
Q ss_pred CChhHHHHHHHHHHHHHhh---hhcCCcEEEEEecceecCCCCh-HHHHHHhcC--ccc----cccccc-CCcccccccH
Q 017914 186 TTELGRLRLSAEKGWLNLG---RDLGISAQVFRLGGIYGPGRSS-VDTIIKQLP--LSE----GQKMRR-ARQYTSRIHV 254 (364)
Q Consensus 186 ~~~Y~~sK~~~E~~~~~~~---~~~~~~~~ilRp~~v~g~~~~~-~~~~~~~~~--~~~----~~~~~~-~~~~~~~i~v 254 (364)
...|+.+|...|.+++.++ ...+++++++|||.+.++.... ......... ... ...... ......++++
T Consensus 150 ~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (280)
T PRK06914 150 LSPYVSSKYALEGFSESLRLELKPFGIDVALIEPGSYNTNIWEVGKQLAENQSETTSPYKEYMKKIQKHINSGSDTFGNP 229 (280)
T ss_pred CchhHHhHHHHHHHHHHHHHHhhhhCCEEEEEecCCcccchhhccccccccccccccchHHHHHHHHHHHhhhhhccCCH
Confidence 4689999999999988876 3458999999999887763110 000000000 000 000000 0112346889
Q ss_pred HHHHHHHHHHccCCCCCceEEEeCCCCCCHH
Q 017914 255 DDICQVLSASIDKPSAWNVYNVVDDDPAPRE 285 (364)
Q Consensus 255 ~Dva~~~~~~l~~~~~g~~~~i~~~~~~s~~ 285 (364)
+|+|++++.+++++..+..|+++++..+++.
T Consensus 230 ~dva~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (280)
T PRK06914 230 IDVANLIVEIAESKRPKLRYPIGKGVKLMIL 260 (280)
T ss_pred HHHHHHHHHHHcCCCCCcccccCCchHHHHH
Confidence 9999999999998877667888776544443
|
|
| >PRK07067 sorbitol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.77 E-value=3.1e-17 Score=143.89 Aligned_cols=215 Identities=11% Similarity=-0.007 Sum_probs=140.7
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhh---CCceEEEccCChhhH--Hhh-------ccCce
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQ---SGFDVHLFNANETAL--MIL-------TTLKN 123 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~---~~~~~~~~D~~~~~~--~~~-------~~~d~ 123 (364)
..+++||||| +|+||+++++.|+++|++|++++|+.+....+.. ..+.++.+|++|.+. ..+ ..+|+
T Consensus 4 l~~~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 83 (257)
T PRK07067 4 LQGKVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEIGPAAIAVSLDVTRQDSIDRIVAAAVERFGGIDI 83 (257)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 3457899999 9999999999999999999999998776544322 357788999999663 222 35799
Q ss_pred eeEEEEecCCCCCCC----ChhhhHHH------HHHHHhh----cC-CccEEEEEccce-eecCCCCccccCCCCCCCCC
Q 017914 124 YTHLLVSIPPLEGTG----DPMLKHGE------LLRSTLM----NG-HLQWLGYLSSTG-VYGHSGGAWVDEDYPANPTT 187 (364)
Q Consensus 124 v~~~~~~~~~~~~~~----~~~~~~~~------~l~~a~~----~~-~~~r~v~~Ss~~-vy~~~~~~~~~E~~~~~~~~ 187 (364)
++|+++......... +....... ++..++. .. ...++|++||.. .++. .+..
T Consensus 84 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~------------~~~~ 151 (257)
T PRK07067 84 LFNNAALFDMAPILDISRDSYDRLFAVNVKGLFFLMQAVARHMVEQGRGGKIINMASQAGRRGE------------ALVS 151 (257)
T ss_pred EEECCCcCCCCCcccCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCCCcEEEEeCCHHhCCCC------------CCCc
Confidence 999987643321111 11111222 3333332 21 224799998853 2221 2446
Q ss_pred hhHHHHHHHHHHHHHhhh---hcCCcEEEEEecceecCCCChHHHHHH-hcCcccc---cccccCCcccccccHHHHHHH
Q 017914 188 ELGRLRLSAEKGWLNLGR---DLGISAQVFRLGGIYGPGRSSVDTIIK-QLPLSEG---QKMRRARQYTSRIHVDDICQV 260 (364)
Q Consensus 188 ~Y~~sK~~~E~~~~~~~~---~~~~~~~ilRp~~v~g~~~~~~~~~~~-~~~~~~~---~~~~~~~~~~~~i~v~Dva~~ 260 (364)
.|+.+|...+.+++.++. ..|+++++++||.++++.......... ....... ...+.......+++++|+|++
T Consensus 152 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~ 231 (257)
T PRK07067 152 HYCATKAAVISYTQSAALALIRHGINVNAIAPGVVDTPMWDQVDALFARYENRPPGEKKRLVGEAVPLGRMGVPDDLTGM 231 (257)
T ss_pred hhhhhHHHHHHHHHHHHHHhcccCeEEEEEeeCcccchhhhhhhhhhhhccCCCHHHHHHHHhhcCCCCCccCHHHHHHH
Confidence 899999999999988765 358999999999999864322111111 0101000 011223345678999999999
Q ss_pred HHHHccCCC---CCceEEEeCCCCCC
Q 017914 261 LSASIDKPS---AWNVYNVVDDDPAP 283 (364)
Q Consensus 261 ~~~~l~~~~---~g~~~~i~~~~~~s 283 (364)
++.++.... .|++|++.+|+.++
T Consensus 232 ~~~l~s~~~~~~~g~~~~v~gg~~~~ 257 (257)
T PRK07067 232 ALFLASADADYIVAQTYNVDGGNWMS 257 (257)
T ss_pred HHHHhCcccccccCcEEeecCCEeCC
Confidence 999998653 38999998886543
|
|
| >PRK08219 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.76 E-value=4.1e-17 Score=140.27 Aligned_cols=197 Identities=12% Similarity=0.058 Sum_probs=133.3
Q ss_pred CCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhh--CCceEEEccCChhhH--Hhhc---cCceeeEEEE
Q 017914 58 SPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQ--SGFDVHLFNANETAL--MILT---TLKNYTHLLV 129 (364)
Q Consensus 58 ~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~--~~~~~~~~D~~~~~~--~~~~---~~d~v~~~~~ 129 (364)
++|+||||| +|+||+++++.|+++ ++|++++|+.++...+.+ .+++++.+|++|.+. ..+. ++|.|+|+++
T Consensus 2 ~~~~vlVtG~~g~iG~~l~~~l~~~-~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~ag 80 (227)
T PRK08219 2 ERPTALITGASRGIGAAIARELAPT-HTLLLGGRPAERLDELAAELPGATPFPVDLTDPEAIAAAVEQLGRLDVLVHNAG 80 (227)
T ss_pred CCCEEEEecCCcHHHHHHHHHHHhh-CCEEEEeCCHHHHHHHHHHhccceEEecCCCCHHHHHHHHHhcCCCCEEEECCC
Confidence 357999999 999999999999999 999999998766544432 367899999999664 3443 5899999997
Q ss_pred ecCCCCCCC-Chh---h----------hHHHHHHHHhhcCCccEEEEEccceeecCCCCccccCCCCCCCCChhHHHHHH
Q 017914 130 SIPPLEGTG-DPM---L----------KHGELLRSTLMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANPTTELGRLRLS 195 (364)
Q Consensus 130 ~~~~~~~~~-~~~---~----------~~~~~l~~a~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~~sK~~ 195 (364)
......... +.. . ....+++.+++.. .+++|++||...++... +...|+.+|..
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~v~~ss~~~~~~~~-----------~~~~y~~~K~a 148 (227)
T PRK08219 81 VADLGPVAESTVDEWRATLEVNVVAPAELTRLLLPALRAA-HGHVVFINSGAGLRANP-----------GWGSYAASKFA 148 (227)
T ss_pred cCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC-CCeEEEEcchHhcCcCC-----------CCchHHHHHHH
Confidence 644321110 000 0 1123344444443 46899999876553222 23579999999
Q ss_pred HHHHHHHhhhh-cC-CcEEEEEecceecCCCChHHHHHHhcCcccccccccCCcccccccHHHHHHHHHHHccCCCCCce
Q 017914 196 AEKGWLNLGRD-LG-ISAQVFRLGGIYGPGRSSVDTIIKQLPLSEGQKMRRARQYTSRIHVDDICQVLSASIDKPSAWNV 273 (364)
Q Consensus 196 ~E~~~~~~~~~-~~-~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~~g~~ 273 (364)
.|.+++.++.. .+ +++..++||.+.++... .+.... +. ......+++++|+|++++.+++++..+.+
T Consensus 149 ~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~---~~~~~~----~~----~~~~~~~~~~~dva~~~~~~l~~~~~~~~ 217 (227)
T PRK08219 149 LRALADALREEEPGNVRVTSVHPGRTDTDMQR---GLVAQE----GG----EYDPERYLRPETVAKAVRFAVDAPPDAHI 217 (227)
T ss_pred HHHHHHHHHHHhcCCceEEEEecCCccchHhh---hhhhhh----cc----ccCCCCCCCHHHHHHHHHHHHcCCCCCcc
Confidence 99988877543 24 89999999876553211 111110 00 01124579999999999999998877788
Q ss_pred EEEeC
Q 017914 274 YNVVD 278 (364)
Q Consensus 274 ~~i~~ 278 (364)
+++.-
T Consensus 218 ~~~~~ 222 (227)
T PRK08219 218 TEVVV 222 (227)
T ss_pred ceEEE
Confidence 88764
|
|
| >PRK09186 flagellin modification protein A; Provisional | Back alignment and domain information |
|---|
Probab=99.76 E-value=7.6e-17 Score=141.30 Aligned_cols=210 Identities=15% Similarity=0.065 Sum_probs=134.8
Q ss_pred CCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhh--------hCCceEEEccCChhhH--Hhhc-------
Q 017914 58 SPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELE--------QSGFDVHLFNANETAL--MILT------- 119 (364)
Q Consensus 58 ~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~--------~~~~~~~~~D~~~~~~--~~~~------- 119 (364)
.+|+||||| +|+||+++++.|+++|++|++++|+.++...+. ...+.++.+|++|++. ..++
T Consensus 3 ~~k~vlItGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~ 82 (256)
T PRK09186 3 KGKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFKSKKLSLVELDITDQESLEEFLSKSAEKYG 82 (256)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcC
Confidence 458999999 999999999999999999999999876643321 1235577899999764 2222
Q ss_pred cCceeeEEEEecCCC--CCCCC-----hhhhH----------HHHHHHHhhcCCccEEEEEccceeecCCCCccccCCCC
Q 017914 120 TLKNYTHLLVSIPPL--EGTGD-----PMLKH----------GELLRSTLMNGHLQWLGYLSSTGVYGHSGGAWVDEDYP 182 (364)
Q Consensus 120 ~~d~v~~~~~~~~~~--~~~~~-----~~~~~----------~~~l~~a~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~ 182 (364)
.+|.++|+++..... ....+ ..... .+.++..++..+.+++|++||...+.... .+..+..+
T Consensus 83 ~id~vi~~A~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~-~~~~~~~~ 161 (256)
T PRK09186 83 KIDGAVNCAYPRNKDYGKKFFDVSLDDFNENLSLHLGSSFLFSQQFAKYFKKQGGGNLVNISSIYGVVAPK-FEIYEGTS 161 (256)
T ss_pred CccEEEECCccccccccCccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCceEEEEechhhhcccc-chhccccc
Confidence 379999998543211 11000 01111 12334444455667999999865432221 11223333
Q ss_pred CCCCChhHHHHHHHHHHHHHhhhh---cCCcEEEEEecceecCCCChHHHHHHhcCcccccccccCCcccccccHHHHHH
Q 017914 183 ANPTTELGRLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRSSVDTIIKQLPLSEGQKMRRARQYTSRIHVDDICQ 259 (364)
Q Consensus 183 ~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~ 259 (364)
......|+.+|...|.+++.++.+ .++++++++||.+++.....+....... . ....+++++|+|+
T Consensus 162 ~~~~~~Y~~sK~a~~~l~~~la~e~~~~~i~v~~i~Pg~~~~~~~~~~~~~~~~~-~----------~~~~~~~~~dva~ 230 (256)
T PRK09186 162 MTSPVEYAAIKAGIIHLTKYLAKYFKDSNIRVNCVSPGGILDNQPEAFLNAYKKC-C----------NGKGMLDPDDICG 230 (256)
T ss_pred cCCcchhHHHHHHHHHHHHHHHHHhCcCCeEEEEEecccccCCCCHHHHHHHHhc-C----------CccCCCCHHHhhh
Confidence 333447999999999998877653 4799999999988765422111111110 0 0123589999999
Q ss_pred HHHHHccCCC---CCceEEEeCC
Q 017914 260 VLSASIDKPS---AWNVYNVVDD 279 (364)
Q Consensus 260 ~~~~~l~~~~---~g~~~~i~~~ 279 (364)
+++.++.+.. .|+.+.+.+|
T Consensus 231 ~~~~l~~~~~~~~~g~~~~~~~g 253 (256)
T PRK09186 231 TLVFLLSDQSKYITGQNIIVDDG 253 (256)
T ss_pred hHhheeccccccccCceEEecCC
Confidence 9999997653 3777777665
|
|
| >PRK07523 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.76 E-value=3.3e-17 Score=143.53 Aligned_cols=208 Identities=10% Similarity=-0.017 Sum_probs=137.5
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhh----hh--CCceEEEccCChhhH--Hhh-------cc
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKEL----EQ--SGFDVHLFNANETAL--MIL-------TT 120 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l----~~--~~~~~~~~D~~~~~~--~~~-------~~ 120 (364)
..+++||||| +|+||++++++|+++|++|++++|+.++...+ .. ..+.++.+|++|.+. ..+ ..
T Consensus 8 ~~~k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 87 (255)
T PRK07523 8 LTGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQGLSAHALAFDVTDHDAVRAAIDAFEAEIGP 87 (255)
T ss_pred CCCCEEEEECCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCceEEEEEccCCCHHHHHHHHHHHHHhcCC
Confidence 4568999999 99999999999999999999999987654332 11 236788899999663 222 35
Q ss_pred CceeeEEEEecCCCCCCCChhh----hHHH------HHHHHh----hcCCccEEEEEccceeecCCCCccccCCCCCCCC
Q 017914 121 LKNYTHLLVSIPPLEGTGDPML----KHGE------LLRSTL----MNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANPT 186 (364)
Q Consensus 121 ~d~v~~~~~~~~~~~~~~~~~~----~~~~------~l~~a~----~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~ 186 (364)
+|+++|+++..........+.. .... ++..++ .+.+.+++|++||...+.. ....
T Consensus 88 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~-----------~~~~ 156 (255)
T PRK07523 88 IDILVNNAGMQFRTPLEDFPADAFERLLRTNISSVFYVGQAVARHMIARGAGKIINIASVQSALA-----------RPGI 156 (255)
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEEccchhccC-----------CCCC
Confidence 7999999876543221111111 1112 233333 2345679999998643311 1234
Q ss_pred ChhHHHHHHHHHHHHHhhh---hcCCcEEEEEecceecCCCChH---HHHHHhcCcccccccccCCcccccccHHHHHHH
Q 017914 187 TELGRLRLSAEKGWLNLGR---DLGISAQVFRLGGIYGPGRSSV---DTIIKQLPLSEGQKMRRARQYTSRIHVDDICQV 260 (364)
Q Consensus 187 ~~Y~~sK~~~E~~~~~~~~---~~~~~~~ilRp~~v~g~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~ 260 (364)
..|+.+|...|.+++.++. ..|++++++|||.+.++..... ..+... + ........+..++|+|++
T Consensus 157 ~~y~~sK~a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~--~------~~~~~~~~~~~~~dva~~ 228 (255)
T PRK07523 157 APYTATKGAVGNLTKGMATDWAKHGLQCNAIAPGYFDTPLNAALVADPEFSAW--L------EKRTPAGRWGKVEELVGA 228 (255)
T ss_pred ccHHHHHHHHHHHHHHHHHHhhHhCeEEEEEEECcccCchhhhhccCHHHHHH--H------HhcCCCCCCcCHHHHHHH
Confidence 6799999999999998875 4589999999999988742111 011100 0 000112335779999999
Q ss_pred HHHHccCCC---CCceEEEeCCCCCC
Q 017914 261 LSASIDKPS---AWNVYNVVDDDPAP 283 (364)
Q Consensus 261 ~~~~l~~~~---~g~~~~i~~~~~~s 283 (364)
++.++.... .|+++++.+|...|
T Consensus 229 ~~~l~~~~~~~~~G~~i~~~gg~~~~ 254 (255)
T PRK07523 229 CVFLASDASSFVNGHVLYVDGGITAS 254 (255)
T ss_pred HHHHcCchhcCccCcEEEECCCeecc
Confidence 999997643 38899998876544
|
|
| >PRK06138 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.76 E-value=4.4e-17 Score=142.42 Aligned_cols=208 Identities=10% Similarity=-0.062 Sum_probs=136.1
Q ss_pred CCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhh-----CCceEEEccCChhhH--Hhh-------ccCc
Q 017914 58 SPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQ-----SGFDVHLFNANETAL--MIL-------TTLK 122 (364)
Q Consensus 58 ~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~-----~~~~~~~~D~~~~~~--~~~-------~~~d 122 (364)
.++++|||| +|+||++++++|+++|++|+++.|+.+....... ..+.++.+|++|.+. ..+ ..+|
T Consensus 4 ~~k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id 83 (252)
T PRK06138 4 AGRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIAAGGRAFARQGDVGSAEAVEALVDFVAARWGRLD 83 (252)
T ss_pred CCcEEEEeCCCchHHHHHHHHHHHCCCeEEEecCCHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence 457999999 9999999999999999999999998765433221 346889999999764 222 3689
Q ss_pred eeeEEEEecCCCCCCCChhhh----HH----------HHHHHHhhcCCccEEEEEccceeecCCCCccccCCCCCCCCCh
Q 017914 123 NYTHLLVSIPPLEGTGDPMLK----HG----------ELLRSTLMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANPTTE 188 (364)
Q Consensus 123 ~v~~~~~~~~~~~~~~~~~~~----~~----------~~l~~a~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~ 188 (364)
.|+|+++.............. .. ..++.+++..+.+++|++||...+... .....
T Consensus 84 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~~~~-----------~~~~~ 152 (252)
T PRK06138 84 VLVNNAGFGCGGTVVTTDEADWDAVMRVNVGGVFLWAKYAIPIMQRQGGGSIVNTASQLALAGG-----------RGRAA 152 (252)
T ss_pred EEEECCCCCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcCCeEEEEECChhhccCC-----------CCccH
Confidence 999999865432211111111 11 223333445567899999997433211 13367
Q ss_pred hHHHHHHHHHHHHHhhhhc---CCcEEEEEecceecCCCChHHHHHHhcCcc-cccccccCCcc-cccccHHHHHHHHHH
Q 017914 189 LGRLRLSAEKGWLNLGRDL---GISAQVFRLGGIYGPGRSSVDTIIKQLPLS-EGQKMRRARQY-TSRIHVDDICQVLSA 263 (364)
Q Consensus 189 Y~~sK~~~E~~~~~~~~~~---~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~i~v~Dva~~~~~ 263 (364)
|+.+|.+.+.+++.++.+. +++++++|||.++++.... ........ .........+. ..|++++|+|++++.
T Consensus 153 Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~ 229 (252)
T PRK06138 153 YVASKGAIASLTRAMALDHATDGIRVNAVAPGTIDTPYFRR---IFARHADPEALREALRARHPMNRFGTAEEVAQAALF 229 (252)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCeEEEEEEECCccCcchhh---hhccccChHHHHHHHHhcCCCCCCcCHHHHHHHHHH
Confidence 9999999999999887554 8999999999998775221 11000000 00000001111 236889999999999
Q ss_pred HccCCC---CCceEEEeCC
Q 017914 264 SIDKPS---AWNVYNVVDD 279 (364)
Q Consensus 264 ~l~~~~---~g~~~~i~~~ 279 (364)
++.++. .|+.+.+.++
T Consensus 230 l~~~~~~~~~g~~~~~~~g 248 (252)
T PRK06138 230 LASDESSFATGTTLVVDGG 248 (252)
T ss_pred HcCchhcCccCCEEEECCC
Confidence 998764 3777777654
|
|
| >PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.76 E-value=7.6e-17 Score=141.58 Aligned_cols=211 Identities=11% Similarity=0.033 Sum_probs=136.7
Q ss_pred CCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhh----h----CCceEEEccCChhhH--Hhh-------cc
Q 017914 59 PNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELE----Q----SGFDVHLFNANETAL--MIL-------TT 120 (364)
Q Consensus 59 ~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~----~----~~~~~~~~D~~~~~~--~~~-------~~ 120 (364)
+++||||| +|+||+++++.|+++|++|++++|+......+. . ..+.++.+|+++.+. ..+ ..
T Consensus 2 ~k~ilItG~~~~IG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~ 81 (259)
T PRK12384 2 NQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEYGEGMAYGFGADATSEQSVLALSRGVDEIFGR 81 (259)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 57899999 999999999999999999999999865443321 1 247889999998653 222 35
Q ss_pred CceeeEEEEecCCCCCCCChhh----hHHHH----------HHHHhhcCC-ccEEEEEccce-eecCCCCccccCCCCCC
Q 017914 121 LKNYTHLLVSIPPLEGTGDPML----KHGEL----------LRSTLMNGH-LQWLGYLSSTG-VYGHSGGAWVDEDYPAN 184 (364)
Q Consensus 121 ~d~v~~~~~~~~~~~~~~~~~~----~~~~~----------l~~a~~~~~-~~r~v~~Ss~~-vy~~~~~~~~~E~~~~~ 184 (364)
+|+++|+++............. ....| +...+...+ ..++|++||.. .++..
T Consensus 82 id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~~ss~~~~~~~~------------ 149 (259)
T PRK12384 82 VDLLVYNAGIAKAAFITDFQLGDFDRSLQVNLVGYFLCAREFSRLMIRDGIQGRIIQINSKSGKVGSK------------ 149 (259)
T ss_pred CCEEEECCCcCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCcEEEEecCcccccCCC------------
Confidence 7999999875443221111111 11222 222233344 35899998853 33211
Q ss_pred CCChhHHHHHHHHHHHHHhhh---hcCCcEEEEEecceecCCC--ChHHHHHHhcCcccc---cccccCCcccccccHHH
Q 017914 185 PTTELGRLRLSAEKGWLNLGR---DLGISAQVFRLGGIYGPGR--SSVDTIIKQLPLSEG---QKMRRARQYTSRIHVDD 256 (364)
Q Consensus 185 ~~~~Y~~sK~~~E~~~~~~~~---~~~~~~~ilRp~~v~g~~~--~~~~~~~~~~~~~~~---~~~~~~~~~~~~i~v~D 256 (364)
....|+.+|.+.+.+++.++. ..|++++++|||.+++... ..+..+.....+... .....+.....+++.+|
T Consensus 150 ~~~~Y~~sKaa~~~l~~~la~e~~~~gi~v~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 229 (259)
T PRK12384 150 HNSGYSAAKFGGVGLTQSLALDLAEYGITVHSLMLGNLLKSPMFQSLLPQYAKKLGIKPDEVEQYYIDKVPLKRGCDYQD 229 (259)
T ss_pred CCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCCcccchhhhhhhHHHHHhcCCChHHHHHHHHHhCcccCCCCHHH
Confidence 235799999999999888864 4689999999998876542 222222211111100 01112234466799999
Q ss_pred HHHHHHHHccCCC---CCceEEEeCCCC
Q 017914 257 ICQVLSASIDKPS---AWNVYNVVDDDP 281 (364)
Q Consensus 257 va~~~~~~l~~~~---~g~~~~i~~~~~ 281 (364)
++++++.++.+.. .|++|++.+|+.
T Consensus 230 v~~~~~~l~~~~~~~~~G~~~~v~~g~~ 257 (259)
T PRK12384 230 VLNMLLFYASPKASYCTGQSINVTGGQV 257 (259)
T ss_pred HHHHHHHHcCcccccccCceEEEcCCEE
Confidence 9999998887552 388999988753
|
|
| >PRK07774 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.76 E-value=5.3e-17 Score=141.76 Aligned_cols=205 Identities=11% Similarity=0.052 Sum_probs=135.8
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhh----h--CCceEEEccCChhhH--Hh-------hcc
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELE----Q--SGFDVHLFNANETAL--MI-------LTT 120 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~----~--~~~~~~~~D~~~~~~--~~-------~~~ 120 (364)
..++++|||| +|+||++++++|+++|++|++++|+......+. . .++..+.+|++|.+. .. +..
T Consensus 4 ~~~k~vlItGasg~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 83 (250)
T PRK07774 4 FDDKVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVADGGTAIAVQVDVSDPDSAKAMADATVSAFGG 83 (250)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence 3458999999 899999999999999999999999865543322 1 246778999999663 21 235
Q ss_pred CceeeEEEEecCCCC--C-C----CChhhhHHHH------HHHHhh----cCCccEEEEEccceeecCCCCccccCCCCC
Q 017914 121 LKNYTHLLVSIPPLE--G-T----GDPMLKHGEL------LRSTLM----NGHLQWLGYLSSTGVYGHSGGAWVDEDYPA 183 (364)
Q Consensus 121 ~d~v~~~~~~~~~~~--~-~----~~~~~~~~~~------l~~a~~----~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~ 183 (364)
+|.|+|+++...... . . .+.......| +..++. ..+.+++|++||...|.
T Consensus 84 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~------------- 150 (250)
T PRK07774 84 IDYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGALVCTRAVYKHMAKRGGGAIVNQSSTAAWL------------- 150 (250)
T ss_pred CCEEEECCCCcCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCcEEEEEecccccC-------------
Confidence 899999998643211 0 0 1111111222 222222 33456899999987653
Q ss_pred CCCChhHHHHHHHHHHHHHhhhhc---CCcEEEEEecceecCCCCh--HHHHHHhcCcccccccccCCcccccccHHHHH
Q 017914 184 NPTTELGRLRLSAEKGWLNLGRDL---GISAQVFRLGGIYGPGRSS--VDTIIKQLPLSEGQKMRRARQYTSRIHVDDIC 258 (364)
Q Consensus 184 ~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilRp~~v~g~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva 258 (364)
+.+.|+.+|.+.|.+++.++++. ++.+++++||.+..+.... ...+.... .. . ....-+.+++|+|
T Consensus 151 -~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~-~~-~------~~~~~~~~~~d~a 221 (250)
T PRK07774 151 -YSNFYGLAKVGLNGLTQQLARELGGMNIRVNAIAPGPIDTEATRTVTPKEFVADM-VK-G------IPLSRMGTPEDLV 221 (250)
T ss_pred -CccccHHHHHHHHHHHHHHHHHhCccCeEEEEEecCcccCccccccCCHHHHHHH-Hh-c------CCCCCCcCHHHHH
Confidence 23579999999999999987653 7999999999887665321 11111110 00 0 0011236789999
Q ss_pred HHHHHHccCC---CCCceEEEeCCCCCC
Q 017914 259 QVLSASIDKP---SAWNVYNVVDDDPAP 283 (364)
Q Consensus 259 ~~~~~~l~~~---~~g~~~~i~~~~~~s 283 (364)
++++.++... ..|++|++.+|+.++
T Consensus 222 ~~~~~~~~~~~~~~~g~~~~v~~g~~~~ 249 (250)
T PRK07774 222 GMCLFLLSDEASWITGQIFNVDGGQIIR 249 (250)
T ss_pred HHHHHHhChhhhCcCCCEEEECCCeecc
Confidence 9999998864 248899999886543
|
|
| >KOG2774 consensus NAD dependent epimerase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.76 E-value=4.7e-17 Score=132.31 Aligned_cols=290 Identities=13% Similarity=0.088 Sum_probs=196.0
Q ss_pred CCCCCeEEEEc-CChhhHHHHHHHHhC-CC-EEEEEEeCchhhhhhhhCCceEEEccCChhh-H-Hhh--ccCceeeEEE
Q 017914 56 WQSPNRMLILG-MGFVGRIFAEKIKNQ-GW-VVSGTCTNVMKKKELEQSGFDVHLFNANETA-L-MIL--TTLKNYTHLL 128 (364)
Q Consensus 56 ~~~~~~vlVtG-tG~iG~~l~~~L~~~-g~-~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~-~-~~~--~~~d~v~~~~ 128 (364)
.....+||||| -|.+|..++..|..+ |- .|+.-+........+ ..-.++..|+.|-. + +.. ..+|..+|..
T Consensus 41 ~~~~PrvLITG~LGQLG~~~A~LLR~~yGs~~VILSDI~KPp~~V~--~~GPyIy~DILD~K~L~eIVVn~RIdWL~HfS 118 (366)
T KOG2774|consen 41 TQKAPRVLITGSLGQLGRGLASLLRYMYGSECVILSDIVKPPANVT--DVGPYIYLDILDQKSLEEIVVNKRIDWLVHFS 118 (366)
T ss_pred cCCCCeEEEecchHHHhHHHHHHHHHHhCCccEehhhccCCchhhc--ccCCchhhhhhccccHHHhhcccccceeeeHH
Confidence 45567999999 699999999999876 64 455544433222222 23467778888833 4 222 5688999887
Q ss_pred EecCCCCC-----CCChhhhHHHHHHHHhhcCCccEEEEEccceeecCCCCcc-ccCCCCCCCCChhHHHHHHHHHHHHH
Q 017914 129 VSIPPLEG-----TGDPMLKHGELLRSTLMNGHLQWLGYLSSTGVYGHSGGAW-VDEDYPANPTTELGRLRLSAEKGWLN 202 (364)
Q Consensus 129 ~~~~~~~~-----~~~~~~~~~~~l~~a~~~~~~~r~v~~Ss~~vy~~~~~~~-~~E~~~~~~~~~Y~~sK~~~E~~~~~ 202 (364)
+..+.... .......+.-|+++.+++.+.+-| .-|+++.||+.+... ...-+...|...||.||..+|.+-+.
T Consensus 119 ALLSAvGE~NVpLA~~VNI~GvHNil~vAa~~kL~iF-VPSTIGAFGPtSPRNPTPdltIQRPRTIYGVSKVHAEL~GEy 197 (366)
T KOG2774|consen 119 ALLSAVGETNVPLALQVNIRGVHNILQVAAKHKLKVF-VPSTIGAFGPTSPRNPTPDLTIQRPRTIYGVSKVHAELLGEY 197 (366)
T ss_pred HHHHHhcccCCceeeeecchhhhHHHHHHHHcCeeEe-ecccccccCCCCCCCCCCCeeeecCceeechhHHHHHHHHHH
Confidence 65443221 112234556789999988877633 369999999766443 23333456889999999999999999
Q ss_pred hhhhcCCcEEEEEecceecCC---CC----hHHHHHHhcCcccccccccCCcccccccHHHHHHHHHHHccCCCC---Cc
Q 017914 203 LGRDLGISAQVFRLGGIYGPG---RS----SVDTIIKQLPLSEGQKMRRARQYTSRIHVDDICQVLSASIDKPSA---WN 272 (364)
Q Consensus 203 ~~~~~~~~~~ilRp~~v~g~~---~~----~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~~---g~ 272 (364)
+..++|+++..+|.+.++... ++ .+..+.....-+.....-.++...++++.+|+-++++.++..++. .+
T Consensus 198 ~~hrFg~dfr~~rfPg~is~~~pgggttdya~A~f~~Al~~gk~tCylrpdtrlpmmy~~dc~~~~~~~~~a~~~~lkrr 277 (366)
T KOG2774|consen 198 FNHRFGVDFRSMRFPGIISATKPGGGTTDYAIAIFYDALQKGKHTCYLRPDTRLPMMYDTDCMASVIQLLAADSQSLKRR 277 (366)
T ss_pred HHhhcCccceecccCcccccCCCCCCcchhHHHHHHHHHHcCCcccccCCCccCceeehHHHHHHHHHHHhCCHHHhhhh
Confidence 989999999999998888653 22 122222222112222333456678889999999999999887643 57
Q ss_pred eEEEeCCCCCCHHHHHHHHHHHh-cCCCCCcccCCCCCCCCCCCccCCCCCCCeEEEchhHHHhcCcccCCCCHHHHHHH
Q 017914 273 VYNVVDDDPAPREEVFAYAWDLV-EKKWPGLLKHRKPRENTESSNEKGSSRGEKRVSNVRMKKELGVRLWHPSYKSGLQS 351 (364)
Q Consensus 273 ~~~i~~~~~~s~~el~~~i~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~e~l~~ 351 (364)
+||+.+ ..+|-.|+++.+.+.. |.+ +.+. +.... .-.......+|.+.+++++.|+-++ .+...+..
T Consensus 278 ~ynvt~-~sftpee~~~~~~~~~p~~~----i~y~-----~~srq-~iad~wp~~~dds~ar~~wh~~h~~-~l~~~i~~ 345 (366)
T KOG2774|consen 278 TYNVTG-FSFTPEEIADAIRRVMPGFE----IDYD-----ICTRQ-SIADSWPMSLDDSEARTEWHEKHSL-HLLSIIST 345 (366)
T ss_pred eeeece-eccCHHHHHHHHHhhCCCce----eecc-----cchhh-hhhhhcccccCchhHhhHHHHhhhh-hHHHHHHH
Confidence 999875 7899999999988887 322 1110 00000 0011223467999999999999988 88888888
Q ss_pred HHHHhcccC
Q 017914 352 IINQMDQPY 360 (364)
Q Consensus 352 ~~~~~~~~~ 360 (364)
++.-.++|+
T Consensus 346 ~i~~~~~n~ 354 (366)
T KOG2774|consen 346 VVAVHKSNL 354 (366)
T ss_pred HHHHHHhhh
Confidence 888777766
|
|
| >PRK12829 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.76 E-value=4.2e-17 Score=143.57 Aligned_cols=214 Identities=14% Similarity=0.053 Sum_probs=135.4
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhh----CCceEEEccCChhhH--Hhh-------ccCc
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQ----SGFDVHLFNANETAL--MIL-------TTLK 122 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~----~~~~~~~~D~~~~~~--~~~-------~~~d 122 (364)
.++++||||| +|+||++++++|+++|++|++++|+.+....+.+ ..+.++.+|++|++. ..+ .++|
T Consensus 9 ~~~~~vlItGa~g~iG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d 88 (264)
T PRK12829 9 LDGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAARLPGAKVTATVADVADPAQVERVFDTAVERFGGLD 88 (264)
T ss_pred cCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCceEEEEccCCCHHHHHHHHHHHHHHhCCCC
Confidence 4568999999 9999999999999999999999998765544322 245789999999763 222 4689
Q ss_pred eeeEEEEecCCCCCCC-----ChhhhHH------HHHHHH----hhcCCc-cEEEEEccceeecCCCCccccCCCCCCCC
Q 017914 123 NYTHLLVSIPPLEGTG-----DPMLKHG------ELLRST----LMNGHL-QWLGYLSSTGVYGHSGGAWVDEDYPANPT 186 (364)
Q Consensus 123 ~v~~~~~~~~~~~~~~-----~~~~~~~------~~l~~a----~~~~~~-~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~ 186 (364)
+|+|+++......... +...... .++..+ +...+. ++++++||...... ....
T Consensus 89 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~vv~~ss~~~~~~-----------~~~~ 157 (264)
T PRK12829 89 VLVNNAGIAGPTGGIDEITPEQWEQTLAVNLNGQFYFARAAVPLLKASGHGGVIIALSSVAGRLG-----------YPGR 157 (264)
T ss_pred EEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEecccccccC-----------CCCC
Confidence 9999998652221111 1111111 122222 234444 67888877542211 1123
Q ss_pred ChhHHHHHHHHHHHHHhhhh---cCCcEEEEEecceecCCCChH-HHHHHhcCccccc---ccccCCcccccccHHHHHH
Q 017914 187 TELGRLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRSSV-DTIIKQLPLSEGQ---KMRRARQYTSRIHVDDICQ 259 (364)
Q Consensus 187 ~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~-~~~~~~~~~~~~~---~~~~~~~~~~~i~v~Dva~ 259 (364)
..|+.+|...|.+++.++.. .+++++++|||.++++..... ............. ..........+++++|+|+
T Consensus 158 ~~y~~~K~a~~~~~~~l~~~~~~~~i~~~~l~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~ 237 (264)
T PRK12829 158 TPYAASKWAVVGLVKSLAIELGPLGIRVNAILPGIVRGPRMRRVIEARAQQLGIGLDEMEQEYLEKISLGRMVEPEDIAA 237 (264)
T ss_pred chhHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCCcCChHHHHHhhhhhhccCCChhHHHHHHHhcCCCCCCCCHHHHHH
Confidence 56999999999999888654 389999999999998763211 1100000000000 0000011234799999999
Q ss_pred HHHHHccCC---CCCceEEEeCCCC
Q 017914 260 VLSASIDKP---SAWNVYNVVDDDP 281 (364)
Q Consensus 260 ~~~~~l~~~---~~g~~~~i~~~~~ 281 (364)
++..++... ..|+.|++.+|..
T Consensus 238 ~~~~l~~~~~~~~~g~~~~i~~g~~ 262 (264)
T PRK12829 238 TALFLASPAARYITGQAISVDGNVE 262 (264)
T ss_pred HHHHHcCccccCccCcEEEeCCCcc
Confidence 998888653 2488999988753
|
|
| >PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.75 E-value=1.8e-16 Score=139.29 Aligned_cols=211 Identities=11% Similarity=-0.000 Sum_probs=132.6
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhh---hhhh--CCceEEEccCChhhH--Hhh-------ccC
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKK---ELEQ--SGFDVHLFNANETAL--MIL-------TTL 121 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~---~l~~--~~~~~~~~D~~~~~~--~~~-------~~~ 121 (364)
..++++|||| +|+||++++++|+++|++|++++|+..... .+.. ..+.++.+|+++.+. ..+ ..+
T Consensus 6 ~~~k~vlVtGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 85 (260)
T PRK12823 6 FAGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSELVHEVAAELRAAGGEALALTADLETYAGAQAAMAAAVEAFGRI 85 (260)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCchHHHHHHHHHHhcCCeEEEEEEeCCCHHHHHHHHHHHHHHcCCC
Confidence 3458999999 999999999999999999999999753221 1211 246678899999653 222 357
Q ss_pred ceeeEEEEecCCCCC---CC--ChhhhHH----------HHHHHHhhcCCccEEEEEccceeecCCCCccccCCCCCCCC
Q 017914 122 KNYTHLLVSIPPLEG---TG--DPMLKHG----------ELLRSTLMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANPT 186 (364)
Q Consensus 122 d~v~~~~~~~~~~~~---~~--~~~~~~~----------~~l~~a~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~ 186 (364)
|.++|+++....... .. +...... ..++..+++.+..++|++||...++. +.
T Consensus 86 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~-------------~~ 152 (260)
T PRK12823 86 DVLINNVGGTIWAKPFEEYEEEQIEAEIRRSLFPTLWCCRAVLPHMLAQGGGAIVNVSSIATRGI-------------NR 152 (260)
T ss_pred eEEEECCccccCCCChhhCChHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEcCccccCC-------------CC
Confidence 999998864321111 11 1111111 23344444555678999999876531 12
Q ss_pred ChhHHHHHHHHHHHHHhhhhc---CCcEEEEEecceecCCCChHHHHH--HhcCcc---c-ccccccCCcccccccHHHH
Q 017914 187 TELGRLRLSAEKGWLNLGRDL---GISAQVFRLGGIYGPGRSSVDTII--KQLPLS---E-GQKMRRARQYTSRIHVDDI 257 (364)
Q Consensus 187 ~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilRp~~v~g~~~~~~~~~~--~~~~~~---~-~~~~~~~~~~~~~i~v~Dv 257 (364)
.+|+.+|.+.+.+++.++.+. ++++++++||.++++......... ...... . ...........-+.+++|+
T Consensus 153 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv 232 (260)
T PRK12823 153 VPYSAAKGGVNALTASLAFEYAEHGIRVNAVAPGGTEAPPRRVPRNAAPQSEQEKAWYQQIVDQTLDSSLMKRYGTIDEQ 232 (260)
T ss_pred CccHHHHHHHHHHHHHHHHHhcccCcEEEEEecCccCCcchhhHHhhccccccccccHHHHHHHHhccCCcccCCCHHHH
Confidence 469999999999999887654 899999999999986421100000 000000 0 0000000111224578999
Q ss_pred HHHHHHHccCCC---CCceEEEeCCC
Q 017914 258 CQVLSASIDKPS---AWNVYNVVDDD 280 (364)
Q Consensus 258 a~~~~~~l~~~~---~g~~~~i~~~~ 280 (364)
|++++.++.... .|++|++.+|+
T Consensus 233 a~~~~~l~s~~~~~~~g~~~~v~gg~ 258 (260)
T PRK12823 233 VAAILFLASDEASYITGTVLPVGGGD 258 (260)
T ss_pred HHHHHHHcCcccccccCcEEeecCCC
Confidence 999999887652 48899997764
|
|
| >KOG1221 consensus Acyl-CoA reductase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.75 E-value=6.7e-17 Score=147.31 Aligned_cols=237 Identities=14% Similarity=0.097 Sum_probs=166.9
Q ss_pred CCCCCeEEEEc-CChhhHHHHHHHHhCC---CEEEEEEeCchhhhh---hh------------h------CCceEEEccC
Q 017914 56 WQSPNRMLILG-MGFVGRIFAEKIKNQG---WVVSGTCTNVMKKKE---LE------------Q------SGFDVHLFNA 110 (364)
Q Consensus 56 ~~~~~~vlVtG-tG~iG~~l~~~L~~~g---~~V~~~~r~~~~~~~---l~------------~------~~~~~~~~D~ 110 (364)
...+++||||| |||+|..+++.|++.- -+++++.|.....+. +. + .++..+.||+
T Consensus 9 f~~~k~i~vTG~tGFlgKVliEklLr~~p~v~~IYlLiR~k~g~~~~~Rl~~~~~~~lF~~l~~~~p~~l~Kv~pi~GDi 88 (467)
T KOG1221|consen 9 FYKNKTIFVTGATGFLGKVLIEKLLRTTPDVKRIYLLIRAKKGKAAQERLRTELKDPLFEVLKEKKPEALEKVVPIAGDI 88 (467)
T ss_pred HhCCCeEEEEcccchhHHHHHHHHHhcCcCcceEEEEEecCCCCCHHHHHHHHHhhhHHHHHHhhCccceecceeccccc
Confidence 35678999998 9999999999999863 378888886543211 10 0 4678899999
Q ss_pred ChhhH--------HhhccCceeeEEEEecCCCCCCC---ChhhhHHHHHHHHhhc-CCccEEEEEccceeecCCCCcccc
Q 017914 111 NETAL--------MILTTLKNYTHLLVSIPPLEGTG---DPMLKHGELLRSTLMN-GHLQWLGYLSSTGVYGHSGGAWVD 178 (364)
Q Consensus 111 ~~~~~--------~~~~~~d~v~~~~~~~~~~~~~~---~~~~~~~~~l~~a~~~-~~~~r~v~~Ss~~vy~~~~~~~~~ 178 (364)
.++++ ...+++|+|+|+|+......... .-+..++.+++..|++ ...+.++|+||+.+.- ....+.
T Consensus 89 ~~~~LGis~~D~~~l~~eV~ivih~AAtvrFde~l~~al~iNt~Gt~~~l~lak~~~~l~~~vhVSTAy~n~--~~~~i~ 166 (467)
T KOG1221|consen 89 SEPDLGISESDLRTLADEVNIVIHSAATVRFDEPLDVALGINTRGTRNVLQLAKEMVKLKALVHVSTAYSNC--NVGHIE 166 (467)
T ss_pred cCcccCCChHHHHHHHhcCCEEEEeeeeeccchhhhhhhhhhhHhHHHHHHHHHHhhhhheEEEeehhheec--cccccc
Confidence 98765 24578999999999887755332 2233455677777763 4578999999976652 111111
Q ss_pred CC-------------------C---------C-C--CCCChhHHHHHHHHHHHHHhhhhcCCcEEEEEecceecCCCChH
Q 017914 179 ED-------------------Y---------P-A--NPTTELGRLRLSAEKGWLNLGRDLGISAQVFRLGGIYGPGRSSV 227 (364)
Q Consensus 179 E~-------------------~---------~-~--~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~ 227 (364)
|. . + . ...+.|.-+|..+|.++.+.. .+++.+|+||+.+......++
T Consensus 167 E~~y~~~~~~~~~~~i~~~~~~~~~~ld~~~~~l~~~~PNTYtfTKal~E~~i~~~~--~~lPivIiRPsiI~st~~EP~ 244 (467)
T KOG1221|consen 167 EKPYPMPETCNPEKILKLDENLSDELLDQKAPKLLGGWPNTYTFTKALAEMVIQKEA--ENLPLVIIRPSIITSTYKEPF 244 (467)
T ss_pred ccccCccccCCHHHHHhhhccchHHHHHHhhHHhcCCCCCceeehHhhHHHHHHhhc--cCCCeEEEcCCceeccccCCC
Confidence 11 0 0 0 124669999999999998764 479999999999998876666
Q ss_pred HHHHHhcCccccc-----------ccccCCcccccccHHHHHHHHHHHccCC--C----CCceEEEeCCC--CCCHHHHH
Q 017914 228 DTIIKQLPLSEGQ-----------KMRRARQYTSRIHVDDICQVLSASIDKP--S----AWNVYNVVDDD--PAPREEVF 288 (364)
Q Consensus 228 ~~~~~~~~~~~~~-----------~~~~~~~~~~~i~v~Dva~~~~~~l~~~--~----~g~~~~i~~~~--~~s~~el~ 288 (364)
.-|..+.....+. ...+.+...++|++|.++.+++.+.-+- . .-.+||+++++ +++|.++.
T Consensus 245 pGWidn~~gp~g~i~g~gkGvlr~~~~d~~~~adiIPvD~vvN~~ia~~~~~~~~~~~~~~~IY~~tss~~Np~t~~~~~ 324 (467)
T KOG1221|consen 245 PGWIDNLNGPDGVIIGYGKGVLRCFLVDPKAVADIIPVDMVVNAMIASAWQHAGNSKEKTPPIYHLTSSNDNPVTWGDFI 324 (467)
T ss_pred CCccccCCCCceEEEEeccceEEEEEEccccccceeeHHHHHHHHHHHHHHHhccCCCCCCcEEEecccccCcccHHHHH
Confidence 5555543322221 1235577789999999999998766321 1 13499999884 69999999
Q ss_pred HHHHHHhc
Q 017914 289 AYAWDLVE 296 (364)
Q Consensus 289 ~~i~~~~g 296 (364)
+...+.+.
T Consensus 325 e~~~~~~~ 332 (467)
T KOG1221|consen 325 ELALRYFE 332 (467)
T ss_pred HHHHHhcc
Confidence 99988875
|
|
| >TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase | Back alignment and domain information |
|---|
Probab=99.75 E-value=1.3e-16 Score=139.20 Aligned_cols=204 Identities=9% Similarity=-0.032 Sum_probs=135.0
Q ss_pred CCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhh------CCceEEEccCChhhH--Hhh-------ccC
Q 017914 58 SPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQ------SGFDVHLFNANETAL--MIL-------TTL 121 (364)
Q Consensus 58 ~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~------~~~~~~~~D~~~~~~--~~~-------~~~ 121 (364)
.+++||||| +|+||++++++|+++|++|++++|+.+....+.. .++.++.+|++|.+. ..+ ..+
T Consensus 2 ~~~~ilItGas~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~ 81 (250)
T TIGR03206 2 KDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAKGGNAQAFACDITDRDSVDTAVAAAEQALGPV 81 (250)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 357999999 9999999999999999999999998765443321 357889999998663 222 357
Q ss_pred ceeeEEEEecCCCCCCCChh----hhHHH------HH----HHHhhcCCccEEEEEccceeecCCCCccccCCCCCCCCC
Q 017914 122 KNYTHLLVSIPPLEGTGDPM----LKHGE------LL----RSTLMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANPTT 187 (364)
Q Consensus 122 d~v~~~~~~~~~~~~~~~~~----~~~~~------~l----~~a~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~ 187 (364)
|+++|+++............ ..... ++ ...+++.+.+++|++||...+.... ...
T Consensus 82 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~iss~~~~~~~~-----------~~~ 150 (250)
T TIGR03206 82 DVLVNNAGWDKFGPFTKTEPPLWERLIAINLTGALHMHHAVLPGMVERGAGRIVNIASDAARVGSS-----------GEA 150 (250)
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEECchhhccCCC-----------CCc
Confidence 99999997643221111111 11112 22 2222345668999999987664322 235
Q ss_pred hhHHHHHHHHHHHHHhhhhc---CCcEEEEEecceecCCCChH-------HHHHHhcCcccccccccCCcccccccHHHH
Q 017914 188 ELGRLRLSAEKGWLNLGRDL---GISAQVFRLGGIYGPGRSSV-------DTIIKQLPLSEGQKMRRARQYTSRIHVDDI 257 (364)
Q Consensus 188 ~Y~~sK~~~E~~~~~~~~~~---~~~~~ilRp~~v~g~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dv 257 (364)
.|+.+|.+.+.+++.++.+. +++++++|||.++++....+ ..+.... ... .....+...+|+
T Consensus 151 ~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~--~~~------~~~~~~~~~~dv 222 (250)
T TIGR03206 151 VYAACKGGLVAFSKTMAREHARHGITVNVVCPGPTDTALLDDICGGAENPEKLREAF--TRA------IPLGRLGQPDDL 222 (250)
T ss_pred hHHHHHHHHHHHHHHHHHHHhHhCcEEEEEecCcccchhHHhhhhccCChHHHHHHH--Hhc------CCccCCcCHHHH
Confidence 79999999999998887653 89999999999987631110 0011000 000 001123668999
Q ss_pred HHHHHHHccCCC---CCceEEEeCCC
Q 017914 258 CQVLSASIDKPS---AWNVYNVVDDD 280 (364)
Q Consensus 258 a~~~~~~l~~~~---~g~~~~i~~~~ 280 (364)
|+++..++.... .|+++++.+|.
T Consensus 223 a~~~~~l~~~~~~~~~g~~~~~~~g~ 248 (250)
T TIGR03206 223 PGAILFFSSDDASFITGQVLSVSGGL 248 (250)
T ss_pred HHHHHHHcCcccCCCcCcEEEeCCCc
Confidence 999999987653 38899997763
|
Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate. |
| >PRK07060 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.74 E-value=1.2e-16 Score=139.10 Aligned_cols=207 Identities=13% Similarity=0.030 Sum_probs=136.5
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhh-CCceEEEccCChhhH--Hhh---ccCceeeEEEE
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQ-SGFDVHLFNANETAL--MIL---TTLKNYTHLLV 129 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~-~~~~~~~~D~~~~~~--~~~---~~~d~v~~~~~ 129 (364)
..+++++||| +|+||+++++.|+++|++|++++|+.++...+.. .+..++.+|+++.+. ..+ ..+|+|+|+++
T Consensus 7 ~~~~~~lItGa~g~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~d~vi~~ag 86 (245)
T PRK07060 7 FSGKSVLVTGASSGIGRACAVALAQRGARVVAAARNAAALDRLAGETGCEPLRLDVGDDAAIRAALAAAGAFDGLVNCAG 86 (245)
T ss_pred cCCCEEEEeCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCeEEEecCCCHHHHHHHHHHhCCCCEEEECCC
Confidence 3457999999 8999999999999999999999998776655432 357788999998663 333 35899999997
Q ss_pred ecCCCCCCCChhh----hH------HHHHHHHhh----cCC-ccEEEEEccceeecCCCCccccCCCCCCCCChhHHHHH
Q 017914 130 SIPPLEGTGDPML----KH------GELLRSTLM----NGH-LQWLGYLSSTGVYGHSGGAWVDEDYPANPTTELGRLRL 194 (364)
Q Consensus 130 ~~~~~~~~~~~~~----~~------~~~l~~a~~----~~~-~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~~sK~ 194 (364)
............. .. ..++..++. ..+ .++||++||...+... .....|+.+|.
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~-----------~~~~~y~~sK~ 155 (245)
T PRK07060 87 IASLESALDMTAEGFDRVMAVNARGAALVARHVARAMIAAGRGGSIVNVSSQAALVGL-----------PDHLAYCASKA 155 (245)
T ss_pred CCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCcEEEEEccHHHcCCC-----------CCCcHhHHHHH
Confidence 6443211111111 11 122333322 222 3689999987654321 13357999999
Q ss_pred HHHHHHHHhhhh---cCCcEEEEEecceecCCCCh-HHHHHHhcCcccccccccCCcccccccHHHHHHHHHHHccCCC-
Q 017914 195 SAEKGWLNLGRD---LGISAQVFRLGGIYGPGRSS-VDTIIKQLPLSEGQKMRRARQYTSRIHVDDICQVLSASIDKPS- 269 (364)
Q Consensus 195 ~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~- 269 (364)
..|.+++.++.. .+++++.+|||.++++.... +........+.. ......|++++|+|++++.++..+.
T Consensus 156 a~~~~~~~~a~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~d~a~~~~~l~~~~~~ 229 (245)
T PRK07060 156 ALDAITRVLCVELGPHGIRVNSVNPTVTLTPMAAEAWSDPQKSGPMLA------AIPLGRFAEVDDVAAPILFLLSDAAS 229 (245)
T ss_pred HHHHHHHHHHHHHhhhCeEEEEEeeCCCCCchhhhhccCHHHHHHHHh------cCCCCCCCCHHHHHHHHHHHcCcccC
Confidence 999999988754 47999999999998875211 000000000000 0112346999999999999998653
Q ss_pred --CCceEEEeCCC
Q 017914 270 --AWNVYNVVDDD 280 (364)
Q Consensus 270 --~g~~~~i~~~~ 280 (364)
.|+.+++.+|.
T Consensus 230 ~~~G~~~~~~~g~ 242 (245)
T PRK07060 230 MVSGVSLPVDGGY 242 (245)
T ss_pred CccCcEEeECCCc
Confidence 37888887653
|
|
| >PRK12746 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.74 E-value=1.2e-16 Score=139.87 Aligned_cols=207 Identities=13% Similarity=0.019 Sum_probs=131.5
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEE-EeCchhhhhh----hh--CCceEEEccCChhhH--Hhhc-------
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGT-CTNVMKKKEL----EQ--SGFDVHLFNANETAL--MILT------- 119 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~-~r~~~~~~~l----~~--~~~~~~~~D~~~~~~--~~~~------- 119 (364)
..+++|+||| +|+||++++++|+++|++|+++ .|+.++.... .. ..+.++.+|++|.+. ..++
T Consensus 4 ~~~~~ilItGasg~iG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~ 83 (254)
T PRK12746 4 LDGKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREIESNGGKAFLIEADLNSIDGVKKLVEQLKNELQ 83 (254)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCcCCHHHHHHHHHHHHHHhc
Confidence 3457999999 9999999999999999999875 5665443222 11 246788999999763 2222
Q ss_pred ------cCceeeEEEEecCCCCCCCChhh----hHHHH------HHHHhhc--CCccEEEEEccceeecCCCCccccCCC
Q 017914 120 ------TLKNYTHLLVSIPPLEGTGDPML----KHGEL------LRSTLMN--GHLQWLGYLSSTGVYGHSGGAWVDEDY 181 (364)
Q Consensus 120 ------~~d~v~~~~~~~~~~~~~~~~~~----~~~~~------l~~a~~~--~~~~r~v~~Ss~~vy~~~~~~~~~E~~ 181 (364)
.+|.++|+++............. ....| +..++.. ...+++|++||..++...
T Consensus 84 ~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~sS~~~~~~~--------- 154 (254)
T PRK12746 84 IRVGTSEIDILVNNAGIGTQGTIENTTEEIFDEIMAVNIKAPFFLIQQTLPLLRAEGRVINISSAEVRLGF--------- 154 (254)
T ss_pred cccCCCCccEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECCHHhcCCC---------
Confidence 58999999875433211111111 11122 2233221 123589999998765322
Q ss_pred CCCCCChhHHHHHHHHHHHHHhhhh---cCCcEEEEEecceecCCCChHHHHHHhcCcccccccccCCcccccccHHHHH
Q 017914 182 PANPTTELGRLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRSSVDTIIKQLPLSEGQKMRRARQYTSRIHVDDIC 258 (364)
Q Consensus 182 ~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva 258 (364)
.+...|+.+|.+.|.+++.++.+ .++++++++||.+.++....+ ........ ..........+++++|+|
T Consensus 155 --~~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~v~pg~~~t~~~~~~---~~~~~~~~--~~~~~~~~~~~~~~~dva 227 (254)
T PRK12746 155 --TGSIAYGLSKGALNTMTLPLAKHLGERGITVNTIMPGYTKTDINAKL---LDDPEIRN--FATNSSVFGRIGQVEDIA 227 (254)
T ss_pred --CCCcchHhhHHHHHHHHHHHHHHHhhcCcEEEEEEECCccCcchhhh---ccChhHHH--HHHhcCCcCCCCCHHHHH
Confidence 23457999999999998877653 579999999999987642110 00000000 000011123457899999
Q ss_pred HHHHHHccCCC---CCceEEEeCC
Q 017914 259 QVLSASIDKPS---AWNVYNVVDD 279 (364)
Q Consensus 259 ~~~~~~l~~~~---~g~~~~i~~~ 279 (364)
+++..++.... .|++|++.++
T Consensus 228 ~~~~~l~~~~~~~~~g~~~~i~~~ 251 (254)
T PRK12746 228 DAVAFLASSDSRWVTGQIIDVSGG 251 (254)
T ss_pred HHHHHHcCcccCCcCCCEEEeCCC
Confidence 99998887653 4889999876
|
|
| >PRK08063 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.74 E-value=2.2e-16 Score=137.89 Aligned_cols=205 Identities=12% Similarity=0.029 Sum_probs=132.3
Q ss_pred CCCeEEEEc-CChhhHHHHHHHHhCCCEEEE-EEeCchhhhhh----hh--CCceEEEccCChhhH--Hhh-------cc
Q 017914 58 SPNRMLILG-MGFVGRIFAEKIKNQGWVVSG-TCTNVMKKKEL----EQ--SGFDVHLFNANETAL--MIL-------TT 120 (364)
Q Consensus 58 ~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~-~~r~~~~~~~l----~~--~~~~~~~~D~~~~~~--~~~-------~~ 120 (364)
.++++|||| +|+||++++++|+++|++|++ ..|+..+.+.+ .. .++.++.+|++|++. ..+ ..
T Consensus 3 ~~~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 82 (250)
T PRK08063 3 SGKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEALGRKALAVKANVGDVEKIKEMFAQIDEEFGR 82 (250)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 347999999 999999999999999999877 46765543322 11 346788899999763 222 25
Q ss_pred CceeeEEEEecCCCCCCCChhh----hHHH------HH----HHHhhcCCccEEEEEccceeecCCCCccccCCCCCCCC
Q 017914 121 LKNYTHLLVSIPPLEGTGDPML----KHGE------LL----RSTLMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANPT 186 (364)
Q Consensus 121 ~d~v~~~~~~~~~~~~~~~~~~----~~~~------~l----~~a~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~ 186 (364)
+|+|+|+++............. .... ++ ...+.+.+.++||++||...+.. ..+.
T Consensus 83 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~-----------~~~~ 151 (250)
T PRK08063 83 LDVFVNNAASGVLRPAMELEESHWDWTMNINAKALLFCAQEAAKLMEKVGGGKIISLSSLGSIRY-----------LENY 151 (250)
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhccC-----------CCCc
Confidence 7999999875432221111111 1111 22 22233455679999998654321 1234
Q ss_pred ChhHHHHHHHHHHHHHhhhh---cCCcEEEEEecceecCCCChH---HHHHHhcCcccccccccCCcccccccHHHHHHH
Q 017914 187 TELGRLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRSSV---DTIIKQLPLSEGQKMRRARQYTSRIHVDDICQV 260 (364)
Q Consensus 187 ~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~ 260 (364)
..|+.+|.+.|.+++.++.+ .++++++++||.+..+....+ ..+.... ... .....+++.+|+|++
T Consensus 152 ~~y~~sK~a~~~~~~~~~~~~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~--~~~------~~~~~~~~~~dva~~ 223 (250)
T PRK08063 152 TTVGVSKAALEALTRYLAVELAPKGIAVNAVSGGAVDTDALKHFPNREELLEDA--RAK------TPAGRMVEPEDVANA 223 (250)
T ss_pred cHHHHHHHHHHHHHHHHHHHHhHhCeEEEeEecCcccCchhhhccCchHHHHHH--hcC------CCCCCCcCHHHHHHH
Confidence 68999999999999888654 589999999999876542111 0111100 000 001235889999999
Q ss_pred HHHHccCCC---CCceEEEeCCCC
Q 017914 261 LSASIDKPS---AWNVYNVVDDDP 281 (364)
Q Consensus 261 ~~~~l~~~~---~g~~~~i~~~~~ 281 (364)
++.++..+. .|+.+++.+|..
T Consensus 224 ~~~~~~~~~~~~~g~~~~~~gg~~ 247 (250)
T PRK08063 224 VLFLCSPEADMIRGQTIIVDGGRS 247 (250)
T ss_pred HHHHcCchhcCccCCEEEECCCee
Confidence 999997653 378999887754
|
|
| >PRK07806 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.74 E-value=1.1e-16 Score=139.60 Aligned_cols=214 Identities=13% Similarity=0.040 Sum_probs=135.0
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchh-hhh----hhh--CCceEEEccCChhhH--Hhh-------c
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMK-KKE----LEQ--SGFDVHLFNANETAL--MIL-------T 119 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~-~~~----l~~--~~~~~~~~D~~~~~~--~~~-------~ 119 (364)
..++++|||| +|+||++++++|+++|++|++++|+... ... +.. .++.++.+|++|++. ..+ .
T Consensus 4 ~~~k~vlItGasggiG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 83 (248)
T PRK07806 4 LPGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEAAGGRASAVGADLTDEESVAALMDTAREEFG 83 (248)
T ss_pred CCCcEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCchHhHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCC
Confidence 3457999999 9999999999999999999999997532 221 211 346788999999764 222 3
Q ss_pred cCceeeEEEEecCCCC-CC---CChhhhHHHHHHHHhhcC--CccEEEEEccceeecCCCCccccCCCCCCCCChhHHHH
Q 017914 120 TLKNYTHLLVSIPPLE-GT---GDPMLKHGELLRSTLMNG--HLQWLGYLSSTGVYGHSGGAWVDEDYPANPTTELGRLR 193 (364)
Q Consensus 120 ~~d~v~~~~~~~~~~~-~~---~~~~~~~~~~l~~a~~~~--~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~~sK 193 (364)
.+|.|+|+++...... .. .+.......++.+++... ...++|++||....... ..+..+ ....|+.+|
T Consensus 84 ~~d~vi~~ag~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~iv~isS~~~~~~~----~~~~~~--~~~~Y~~sK 157 (248)
T PRK07806 84 GLDALVLNASGGMESGMDEDYAMRLNRDAQRNLARAALPLMPAGSRVVFVTSHQAHFIP----TVKTMP--EYEPVARSK 157 (248)
T ss_pred CCcEEEECCCCCCCCCCCcceeeEeeeHHHHHHHHHHHhhccCCceEEEEeCchhhcCc----cccCCc--cccHHHHHH
Confidence 5799999886432111 00 111223344555555422 23489999985432100 011111 246899999
Q ss_pred HHHHHHHHHhhhh---cCCcEEEEEecceecCCCChHHHHHHhcCcccccccccCCcccccccHHHHHHHHHHHccCC-C
Q 017914 194 LSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRSSVDTIIKQLPLSEGQKMRRARQYTSRIHVDDICQVLSASIDKP-S 269 (364)
Q Consensus 194 ~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~-~ 269 (364)
...|.+++.++.+ .++++++++|+.+-++. ...+.... .. ............+++++|+|++++.+++.. .
T Consensus 158 ~a~e~~~~~l~~~~~~~~i~v~~v~pg~~~~~~---~~~~~~~~-~~-~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~ 232 (248)
T PRK07806 158 RAGEDALRALRPELAEKGIGFVVVSGDMIEGTV---TATLLNRL-NP-GAIEARREAAGKLYTVSEFAAEVARAVTAPVP 232 (248)
T ss_pred HHHHHHHHHHHHHhhccCeEEEEeCCccccCch---hhhhhccC-CH-HHHHHHHhhhcccCCHHHHHHHHHHHhhcccc
Confidence 9999999988643 47899999988765542 11111110 00 000000011236799999999999999866 4
Q ss_pred CCceEEEeCCCC
Q 017914 270 AWNVYNVVDDDP 281 (364)
Q Consensus 270 ~g~~~~i~~~~~ 281 (364)
.|++|++++++.
T Consensus 233 ~g~~~~i~~~~~ 244 (248)
T PRK07806 233 SGHIEYVGGADY 244 (248)
T ss_pred CccEEEecCccc
Confidence 589999998864
|
|
| >PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.73 E-value=3.6e-16 Score=136.70 Aligned_cols=210 Identities=10% Similarity=-0.000 Sum_probs=133.1
Q ss_pred CCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCc-hhhhh----hhh--CCceEEEccCChhhH--Hhh-------cc
Q 017914 58 SPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNV-MKKKE----LEQ--SGFDVHLFNANETAL--MIL-------TT 120 (364)
Q Consensus 58 ~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~-~~~~~----l~~--~~~~~~~~D~~~~~~--~~~-------~~ 120 (364)
.+++||||| +|+||++++++|+++|++|++..|+. ..... +.. ..+.++.+|+++.+. ..+ ..
T Consensus 5 ~~~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 84 (252)
T PRK06077 5 KDKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKENGGEGIGVLADVSTREGCETLAKATIDRYGV 84 (252)
T ss_pred CCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHcCCeeEEEEeccCCHHHHHHHHHHHHHHcCC
Confidence 357999999 99999999999999999998877643 22111 111 245678899998663 222 36
Q ss_pred CceeeEEEEecCCCCCCCChh----hhHH------HHHHHHhhc--CCccEEEEEccceeecCCCCccccCCCCCCCCCh
Q 017914 121 LKNYTHLLVSIPPLEGTGDPM----LKHG------ELLRSTLMN--GHLQWLGYLSSTGVYGHSGGAWVDEDYPANPTTE 188 (364)
Q Consensus 121 ~d~v~~~~~~~~~~~~~~~~~----~~~~------~~l~~a~~~--~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~ 188 (364)
+|+|+|+++............ .... .++..++.. ...++||++||...+.. ..+.+.
T Consensus 85 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~-----------~~~~~~ 153 (252)
T PRK06077 85 ADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREGGAIVNIASVAGIRP-----------AYGLSI 153 (252)
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcCcEEEEEcchhccCC-----------CCCchH
Confidence 799999998633322111111 1111 122222221 11258999999776532 234578
Q ss_pred hHHHHHHHHHHHHHhhhhc--CCcEEEEEecceecCCCChHHHHHHhcCcccccccccCCcccccccHHHHHHHHHHHcc
Q 017914 189 LGRLRLSAEKGWLNLGRDL--GISAQVFRLGGIYGPGRSSVDTIIKQLPLSEGQKMRRARQYTSRIHVDDICQVLSASID 266 (364)
Q Consensus 189 Y~~sK~~~E~~~~~~~~~~--~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~ 266 (364)
|+.+|...|.+++.++++. ++.+.+++||.+.++....+..+.. ...............+++++|+|++++.+++
T Consensus 154 Y~~sK~~~~~~~~~l~~~~~~~i~v~~v~Pg~i~t~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~dva~~~~~~~~ 230 (252)
T PRK06077 154 YGAMKAAVINLTKYLALELAPKIRVNAIAPGFVKTKLGESLFKVLG---MSEKEFAEKFTLMGKILDPEEVAEFVAAILK 230 (252)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCEEEEEeeCCccChHHHhhhhccc---ccHHHHHHhcCcCCCCCCHHHHHHHHHHHhC
Confidence 9999999999999987654 6899999999987654211111000 0000000001122367999999999999997
Q ss_pred CCC-CCceEEEeCCCC
Q 017914 267 KPS-AWNVYNVVDDDP 281 (364)
Q Consensus 267 ~~~-~g~~~~i~~~~~ 281 (364)
.+. .|++|++.+|..
T Consensus 231 ~~~~~g~~~~i~~g~~ 246 (252)
T PRK06077 231 IESITGQVFVLDSGES 246 (252)
T ss_pred ccccCCCeEEecCCee
Confidence 654 488999988854
|
|
| >PRK07890 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.73 E-value=8.9e-17 Score=141.02 Aligned_cols=212 Identities=9% Similarity=0.001 Sum_probs=134.1
Q ss_pred CCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhh------hCCceEEEccCChhhH--Hh-------hccC
Q 017914 58 SPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELE------QSGFDVHLFNANETAL--MI-------LTTL 121 (364)
Q Consensus 58 ~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~------~~~~~~~~~D~~~~~~--~~-------~~~~ 121 (364)
.+++||||| +|+||++++++|+++|++|++++|+..+.+.+. ...+.++.+|++|.+. .. +..+
T Consensus 4 ~~k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~ 83 (258)
T PRK07890 4 KGKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEIDDLGRRALAVPTDITDEDQCANLVALALERFGRV 83 (258)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEecCCCCHHHHHHHHHHHHHHcCCc
Confidence 458999999 999999999999999999999999876544432 1346789999998663 22 2467
Q ss_pred ceeeEEEEecCCCCCCCC-----hhhhHH------HHHHHHhhc---CCccEEEEEccceeecCCCCccccCCCCCCCCC
Q 017914 122 KNYTHLLVSIPPLEGTGD-----PMLKHG------ELLRSTLMN---GHLQWLGYLSSTGVYGHSGGAWVDEDYPANPTT 187 (364)
Q Consensus 122 d~v~~~~~~~~~~~~~~~-----~~~~~~------~~l~~a~~~---~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~ 187 (364)
|+++|+++.........+ ...... .++..++.. ...+++|++||...+.. ..+..
T Consensus 84 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~ii~~sS~~~~~~-----------~~~~~ 152 (258)
T PRK07890 84 DALVNNAFRVPSMKPLADADFAHWRAVIELNVLGTLRLTQAFTPALAESGGSIVMINSMVLRHS-----------QPKYG 152 (258)
T ss_pred cEEEECCccCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCEEEEEechhhccC-----------CCCcc
Confidence 999999876433221111 111111 123333321 11258999998754322 12346
Q ss_pred hhHHHHHHHHHHHHHhhhh---cCCcEEEEEecceecCCCC-hHHHHHHhcCcccc---cccccCCcccccccHHHHHHH
Q 017914 188 ELGRLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRS-SVDTIIKQLPLSEG---QKMRRARQYTSRIHVDDICQV 260 (364)
Q Consensus 188 ~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~-~~~~~~~~~~~~~~---~~~~~~~~~~~~i~v~Dva~~ 260 (364)
.|+.+|...|.+++.++.+ .++++++++||.++++... .+............ ...........+.+++|+|++
T Consensus 153 ~Y~~sK~a~~~l~~~~a~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~a 232 (258)
T PRK07890 153 AYKMAKGALLAASQSLATELGPQGIRVNSVAPGYIWGDPLKGYFRHQAGKYGVTVEQIYAETAANSDLKRLPTDDEVASA 232 (258)
T ss_pred hhHHHHHHHHHHHHHHHHHHhhcCcEEEEEeCCccCcHHHHHHhhhcccccCCCHHHHHHHHhhcCCccccCCHHHHHHH
Confidence 7999999999999988754 4899999999999987522 11111000000000 000011122346789999999
Q ss_pred HHHHccCC---CCCceEEEeCCC
Q 017914 261 LSASIDKP---SAWNVYNVVDDD 280 (364)
Q Consensus 261 ~~~~l~~~---~~g~~~~i~~~~ 280 (364)
++.+++.. -.|+++.+.++.
T Consensus 233 ~~~l~~~~~~~~~G~~i~~~gg~ 255 (258)
T PRK07890 233 VLFLASDLARAITGQTLDVNCGE 255 (258)
T ss_pred HHHHcCHhhhCccCcEEEeCCcc
Confidence 99998753 237777766653
|
|
| >PRK05993 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.73 E-value=3.2e-16 Score=138.90 Aligned_cols=208 Identities=16% Similarity=0.182 Sum_probs=134.5
Q ss_pred CCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCChhhH--Hhh--------ccCceeeE
Q 017914 58 SPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETAL--MIL--------TTLKNYTH 126 (364)
Q Consensus 58 ~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~--~~~--------~~~d~v~~ 126 (364)
++++||||| +|+||+++++.|.++|++|++++|+.+....+...+++++.+|++|.+. ..+ ..+|.++|
T Consensus 3 ~~k~vlItGasggiG~~la~~l~~~G~~Vi~~~r~~~~~~~l~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~g~id~li~ 82 (277)
T PRK05993 3 MKRSILITGCSSGIGAYCARALQSDGWRVFATCRKEEDVAALEAEGLEAFQLDYAEPESIAALVAQVLELSGGRLDALFN 82 (277)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCceEEEccCCCHHHHHHHHHHHHHHcCCCccEEEE
Confidence 457899999 8999999999999999999999999887777766788999999999763 221 25799999
Q ss_pred EEEecCCCCCCCChh----hhH----------HHHHHHHhhcCCccEEEEEccceeecCCCCccccCCCCCCCCChhHHH
Q 017914 127 LLVSIPPLEGTGDPM----LKH----------GELLRSTLMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANPTTELGRL 192 (364)
Q Consensus 127 ~~~~~~~~~~~~~~~----~~~----------~~~l~~a~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~~s 192 (364)
+++..........+. ... ..+++..+++.+.+++|++||...+. +..+...|+.+
T Consensus 83 ~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~~~~g~iv~isS~~~~~-----------~~~~~~~Y~as 151 (277)
T PRK05993 83 NGAYGQPGAVEDLPTEALRAQFEANFFGWHDLTRRVIPVMRKQGQGRIVQCSSILGLV-----------PMKYRGAYNAS 151 (277)
T ss_pred CCCcCCCCCcccCCHHHHHHHHhHHhHHHHHHHHHHHHHHhhcCCCEEEEECChhhcC-----------CCCccchHHHH
Confidence 886543321111111 111 23455555566778999999864332 12234689999
Q ss_pred HHHHHHHHHHhh---hhcCCcEEEEEecceecCCCC-hHHHHHHhcCcccc---c-------cc-ccCCcccccccHHHH
Q 017914 193 RLSAEKGWLNLG---RDLGISAQVFRLGGIYGPGRS-SVDTIIKQLPLSEG---Q-------KM-RRARQYTSRIHVDDI 257 (364)
Q Consensus 193 K~~~E~~~~~~~---~~~~~~~~ilRp~~v~g~~~~-~~~~~~~~~~~~~~---~-------~~-~~~~~~~~~i~v~Dv 257 (364)
|...|.+++.++ ...|+++++++||.+-.+... ....+......... . .. .........+..+++
T Consensus 152 K~a~~~~~~~l~~el~~~gi~v~~v~Pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 231 (277)
T PRK05993 152 KFAIEGLSLTLRMELQGSGIHVSLIEPGPIETRFRANALAAFKRWIDIENSVHRAAYQQQMARLEGGGSKSRFKLGPEAV 231 (277)
T ss_pred HHHHHHHHHHHHHHhhhhCCEEEEEecCCccCchhhHHHHHHhhhhccccchhHHHHHHHHHHHHhhhhccccCCCHHHH
Confidence 999999988775 346899999999988654311 11111000000000 0 00 000000113678999
Q ss_pred HHHHHHHccCCCCCceEEE
Q 017914 258 CQVLSASIDKPSAWNVYNV 276 (364)
Q Consensus 258 a~~~~~~l~~~~~g~~~~i 276 (364)
|+.++.++.++.....|.+
T Consensus 232 a~~i~~a~~~~~~~~~~~~ 250 (277)
T PRK05993 232 YAVLLHALTAPRPRPHYRV 250 (277)
T ss_pred HHHHHHHHcCCCCCCeeee
Confidence 9999999988755434544
|
|
| >PRK05876 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.73 E-value=8.2e-16 Score=136.03 Aligned_cols=223 Identities=10% Similarity=-0.066 Sum_probs=137.8
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhh----hh--CCceEEEccCChhhH--Hhh-------cc
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKEL----EQ--SGFDVHLFNANETAL--MIL-------TT 120 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l----~~--~~~~~~~~D~~~~~~--~~~-------~~ 120 (364)
..++++|||| +|+||+++++.|+++|++|++.+|+.+....+ .. ..+.++.+|++|.+. ..+ ..
T Consensus 4 ~~~k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 83 (275)
T PRK05876 4 FPGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVRHREEVTHLADEAFRLLGH 83 (275)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHHcCC
Confidence 4568899999 99999999999999999999999987654432 11 236778999999663 222 35
Q ss_pred CceeeEEEEecCCCCCCCChhh----hHH------HHHHHHh----hcCC-ccEEEEEccceeecCCCCccccCCCCCCC
Q 017914 121 LKNYTHLLVSIPPLEGTGDPML----KHG------ELLRSTL----MNGH-LQWLGYLSSTGVYGHSGGAWVDEDYPANP 185 (364)
Q Consensus 121 ~d~v~~~~~~~~~~~~~~~~~~----~~~------~~l~~a~----~~~~-~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~ 185 (364)
+|+++|+++............. ... .++..++ .+.+ .+++|++||...+.. ..+
T Consensus 84 id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~p~m~~~~~~g~iv~isS~~~~~~-----------~~~ 152 (275)
T PRK05876 84 VDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIHTVEAFLPRLLEQGTGGHVVFTASFAGLVP-----------NAG 152 (275)
T ss_pred CCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCChhhccC-----------CCC
Confidence 7999999876432221111111 111 2223332 2333 468999999765532 124
Q ss_pred CChhHHHHHHHHHHHHHhhh---hcCCcEEEEEecceecCCCChHHHHHHhcCcc--cccccccCCcccccccHHHHHHH
Q 017914 186 TTELGRLRLSAEKGWLNLGR---DLGISAQVFRLGGIYGPGRSSVDTIIKQLPLS--EGQKMRRARQYTSRIHVDDICQV 260 (364)
Q Consensus 186 ~~~Y~~sK~~~E~~~~~~~~---~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~i~v~Dva~~ 260 (364)
...|+.+|...+.+.+.++. ..|+++++++||.+.++............... .....+.....+++++++|+|++
T Consensus 153 ~~~Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~ 232 (275)
T PRK05876 153 LGAYGVAKYGVVGLAETLAREVTADGIGVSVLCPMVVETNLVANSERIRGAACAQSSTTGSPGPLPLQDDNLGVDDIAQL 232 (275)
T ss_pred CchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCccccccccchhhhcCccccccccccccccccccccCCCHHHHHHH
Confidence 46899999986665555543 34899999999998776422111111000000 00111222345678999999999
Q ss_pred HHHHccCCCCCceEEEeCCCCCCHHHHHHHHHHHh
Q 017914 261 LSASIDKPSAWNVYNVVDDDPAPREEVFAYAWDLV 295 (364)
Q Consensus 261 ~~~~l~~~~~g~~~~i~~~~~~s~~el~~~i~~~~ 295 (364)
++.++.+. +.|.+.+ +..+.++.+...+..
T Consensus 233 ~~~ai~~~---~~~~~~~--~~~~~~~~~~~~~~~ 262 (275)
T PRK05876 233 TADAILAN---RLYVLPH--AASRASIRRRFERID 262 (275)
T ss_pred HHHHHHcC---CeEEecC--hhhHHHHHHHHHHHH
Confidence 99999764 3455543 345566555555554
|
|
| >PRK12935 acetoacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.73 E-value=3.7e-16 Score=136.20 Aligned_cols=205 Identities=9% Similarity=-0.056 Sum_probs=132.1
Q ss_pred CCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeC-chhhhhh----hh--CCceEEEccCChhhH--Hhh-------cc
Q 017914 58 SPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTN-VMKKKEL----EQ--SGFDVHLFNANETAL--MIL-------TT 120 (364)
Q Consensus 58 ~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~-~~~~~~l----~~--~~~~~~~~D~~~~~~--~~~-------~~ 120 (364)
.++++|||| +|+||++++++|+++|++|+++.++ ++..+.+ .. .++.++.+|+++.+. ..+ ..
T Consensus 5 ~~~~~lItG~s~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 84 (247)
T PRK12935 5 NGKVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLVNELGKEGHDVYAVQADVSKVEDANRLVEEAVNHFGK 84 (247)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEcCCcHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 458999999 9999999999999999999876553 3332222 11 247789999999663 222 34
Q ss_pred CceeeEEEEecCCCCCC----CChhhhHHHHH------HHHhh----cCCccEEEEEccceeecCCCCccccCCCCCCCC
Q 017914 121 LKNYTHLLVSIPPLEGT----GDPMLKHGELL------RSTLM----NGHLQWLGYLSSTGVYGHSGGAWVDEDYPANPT 186 (364)
Q Consensus 121 ~d~v~~~~~~~~~~~~~----~~~~~~~~~~l------~~a~~----~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~ 186 (364)
+|+|+|+++........ .........|+ ..++. ..+.+++|++||...+... .+.
T Consensus 85 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~-----------~~~ 153 (247)
T PRK12935 85 VDILVNNAGITRDRTFKKLNREDWERVIDVNLSSVFNTTSAVLPYITEAEEGRIISISSIIGQAGG-----------FGQ 153 (247)
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchhhcCCC-----------CCC
Confidence 79999998764432111 11111122222 22222 2345689999986433211 134
Q ss_pred ChhHHHHHHHHHHHHHhhhh---cCCcEEEEEecceecCCCChHHHHHHhcCcccccccccCCcccccccHHHHHHHHHH
Q 017914 187 TELGRLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRSSVDTIIKQLPLSEGQKMRRARQYTSRIHVDDICQVLSA 263 (364)
Q Consensus 187 ~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~ 263 (364)
..|+.+|.+.+.+++.+..+ .++++++++||.+.++.......-.... . ....+.+.+.+++|++++++.
T Consensus 154 ~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~-~------~~~~~~~~~~~~edva~~~~~ 226 (247)
T PRK12935 154 TNYSAAKAGMLGFTKSLALELAKTNVTVNAICPGFIDTEMVAEVPEEVRQK-I------VAKIPKKRFGQADEIAKGVVY 226 (247)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHcCcEEEEEEeCCCcChhhhhccHHHHHH-H------HHhCCCCCCcCHHHHHHHHHH
Confidence 68999999999998887654 3899999999998764321111000000 0 011223567999999999999
Q ss_pred HccCC--CCCceEEEeCCC
Q 017914 264 SIDKP--SAWNVYNVVDDD 280 (364)
Q Consensus 264 ~l~~~--~~g~~~~i~~~~ 280 (364)
+++.. ..|+.||+.++.
T Consensus 227 ~~~~~~~~~g~~~~i~~g~ 245 (247)
T PRK12935 227 LCRDGAYITGQQLNINGGL 245 (247)
T ss_pred HcCcccCccCCEEEeCCCc
Confidence 99765 348999998863
|
|
| >PRK06194 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.72 E-value=4.6e-16 Score=138.71 Aligned_cols=207 Identities=12% Similarity=-0.057 Sum_probs=129.2
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhh----hh--CCceEEEccCChhhH--Hhhc-------c
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKEL----EQ--SGFDVHLFNANETAL--MILT-------T 120 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l----~~--~~~~~~~~D~~~~~~--~~~~-------~ 120 (364)
..+++||||| +|+||++++++|+++|++|++++|+.+..... .. .++.++.+|++|.+. ..++ .
T Consensus 4 ~~~k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~ 83 (287)
T PRK06194 4 FAGKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQGAEVLGVRTDVSDAAQVEALADAALERFGA 83 (287)
T ss_pred CCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 3457999999 99999999999999999999999976543332 11 246679999999663 3332 4
Q ss_pred CceeeEEEEecCCCCCCCChhh----hHHHHHHHH----------hhcCCc------cEEEEEccceeecCCCCccccCC
Q 017914 121 LKNYTHLLVSIPPLEGTGDPML----KHGELLRST----------LMNGHL------QWLGYLSSTGVYGHSGGAWVDED 180 (364)
Q Consensus 121 ~d~v~~~~~~~~~~~~~~~~~~----~~~~~l~~a----------~~~~~~------~r~v~~Ss~~vy~~~~~~~~~E~ 180 (364)
+|.|+|+++............. ....|+... +.+.+. .++|++||...+...
T Consensus 84 id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~-------- 155 (287)
T PRK06194 84 VHLLFNNAGVGAGGLVWENSLADWEWVLGVNLWGVIHGVRAFTPLMLAAAEKDPAYEGHIVNTASMAGLLAP-------- 155 (287)
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccCC--------
Confidence 7999999987554221111111 111222221 222222 589999997655322
Q ss_pred CCCCCCChhHHHHHHHHHHHHHhhhhc-----CCcEEEEEecceecCCCChHHHHHHhcCcccccccccCCcccccccHH
Q 017914 181 YPANPTTELGRLRLSAEKGWLNLGRDL-----GISAQVFRLGGIYGPGRSSVDTIIKQLPLSEGQKMRRARQYTSRIHVD 255 (364)
Q Consensus 181 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~-----~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~ 255 (364)
.....|+.+|...|.+++.++.+. ++++..+.||.+...-. ......+ ....+.+.+.++|++++
T Consensus 156 ---~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~irv~~v~pg~i~t~~~----~~~~~~~---~~~~~~~~~~~~~~~~~ 225 (287)
T PRK06194 156 ---PAMGIYNVSKHAVVSLTETLYQDLSLVTDQVGASVLCPYFVPTGIW----QSERNRP---ADLANTAPPTRSQLIAQ 225 (287)
T ss_pred ---CCCcchHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEEeCcccCccc----cccccCc---hhcccCccccchhhHHH
Confidence 133579999999999998887544 36667777766543211 1111111 11223456677777887
Q ss_pred HHHHHHHHHccCCCCCceEEEeCCCCCCHHHHHHHHHHHhc
Q 017914 256 DICQVLSASIDKPSAWNVYNVVDDDPAPREEVFAYAWDLVE 296 (364)
Q Consensus 256 Dva~~~~~~l~~~~~g~~~~i~~~~~~s~~el~~~i~~~~g 296 (364)
|.+..+.... .++..|+++.+.+..+
T Consensus 226 ~~~~~~~~~~---------------~~s~~dva~~i~~~~~ 251 (287)
T PRK06194 226 AMSQKAVGSG---------------KVTAEEVAQLVFDAIR 251 (287)
T ss_pred HHHHhhhhcc---------------CCCHHHHHHHHHHHHH
Confidence 7776653221 1677777777777654
|
|
| >PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.72 E-value=4.1e-16 Score=136.64 Aligned_cols=206 Identities=12% Similarity=-0.012 Sum_probs=133.1
Q ss_pred CCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchh-hh----hhh--hCCceEEEccCChhhH--Hhh-------ccC
Q 017914 59 PNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMK-KK----ELE--QSGFDVHLFNANETAL--MIL-------TTL 121 (364)
Q Consensus 59 ~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~-~~----~l~--~~~~~~~~~D~~~~~~--~~~-------~~~ 121 (364)
+++||||| +|+||++++++|.++|++|++++|+... .. .+. ..++.++.+|+++.+. ..+ ..+
T Consensus 2 ~k~vlItG~sg~iG~~la~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 81 (256)
T PRK12745 2 RPVALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQELRALGVEVIFFPADVADLSAHEAMLDAAQAAWGRI 81 (256)
T ss_pred CcEEEEeCCCchHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHhcCCC
Confidence 46899999 9999999999999999999999986432 11 111 1357889999999653 222 468
Q ss_pred ceeeEEEEecCCCC-CC-----CChhhhHH------HHHHHHhh----c-CC-----ccEEEEEccceeecCCCCccccC
Q 017914 122 KNYTHLLVSIPPLE-GT-----GDPMLKHG------ELLRSTLM----N-GH-----LQWLGYLSSTGVYGHSGGAWVDE 179 (364)
Q Consensus 122 d~v~~~~~~~~~~~-~~-----~~~~~~~~------~~l~~a~~----~-~~-----~~r~v~~Ss~~vy~~~~~~~~~E 179 (364)
|+|+|+++...... .. .+...... .++..++. + .+ +.++|++||...+...
T Consensus 82 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~------- 154 (256)
T PRK12745 82 DCLVNNAGVGVKVRGDLLDLTPESFDRVLAINLRGPFFLTQAVAKRMLAQPEPEELPHRSIVFVSSVNAIMVS------- 154 (256)
T ss_pred CEEEECCccCCCCCCChhhCCHHHHHHHHHhcchHHHHHHHHHHHHHHhccCcCCCCCcEEEEECChhhccCC-------
Confidence 99999987643221 11 11111111 22322221 1 11 5689999986543221
Q ss_pred CCCCCCCChhHHHHHHHHHHHHHhhhh---cCCcEEEEEecceecCCCChH-HHHHHhcCcccccccccCCcccccccHH
Q 017914 180 DYPANPTTELGRLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRSSV-DTIIKQLPLSEGQKMRRARQYTSRIHVD 255 (364)
Q Consensus 180 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~v~ 255 (364)
.+...|+.+|.+.|.+++.++.+ .|++++++|||.+.++..... ..+..... .. ......+.+.+
T Consensus 155 ----~~~~~Y~~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~--~~-----~~~~~~~~~~~ 223 (256)
T PRK12745 155 ----PNRGEYCISKAGLSMAAQLFAARLAEEGIGVYEVRPGLIKTDMTAPVTAKYDALIA--KG-----LVPMPRWGEPE 223 (256)
T ss_pred ----CCCcccHHHHHHHHHHHHHHHHHHHHhCCEEEEEecCCCcCccccccchhHHhhhh--hc-----CCCcCCCcCHH
Confidence 13367999999999999988754 589999999999987643211 11111100 00 00123467899
Q ss_pred HHHHHHHHHccCC---CCCceEEEeCCCCC
Q 017914 256 DICQVLSASIDKP---SAWNVYNVVDDDPA 282 (364)
Q Consensus 256 Dva~~~~~~l~~~---~~g~~~~i~~~~~~ 282 (364)
|+++++..++... ..|+.|++.++...
T Consensus 224 d~a~~i~~l~~~~~~~~~G~~~~i~gg~~~ 253 (256)
T PRK12745 224 DVARAVAALASGDLPYSTGQAIHVDGGLSI 253 (256)
T ss_pred HHHHHHHHHhCCcccccCCCEEEECCCeec
Confidence 9999999888654 24889999887543
|
|
| >PRK12827 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.71 E-value=1e-15 Score=133.55 Aligned_cols=201 Identities=13% Similarity=0.061 Sum_probs=132.0
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCch----hhhhh----h--hCCceEEEccCChhhH--Hhh-----
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVM----KKKEL----E--QSGFDVHLFNANETAL--MIL----- 118 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~----~~~~l----~--~~~~~~~~~D~~~~~~--~~~----- 118 (364)
.++|+||||| +|+||++++++|+++|++|++++|... ....+ . ...+.++.+|++|.+. ..+
T Consensus 4 ~~~~~ilItGasg~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 83 (249)
T PRK12827 4 LDSRRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAAGGKALGLAFDVRDFAATRAALDAGVE 83 (249)
T ss_pred cCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEcCcccccHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence 3468999999 999999999999999999999776422 22111 1 1356789999999763 222
Q ss_pred --ccCceeeEEEEecCCCCCCCChh----h------hHHHHHHHHhh-----cCCccEEEEEccceeecCCCCccccCCC
Q 017914 119 --TTLKNYTHLLVSIPPLEGTGDPM----L------KHGELLRSTLM-----NGHLQWLGYLSSTGVYGHSGGAWVDEDY 181 (364)
Q Consensus 119 --~~~d~v~~~~~~~~~~~~~~~~~----~------~~~~~l~~a~~-----~~~~~r~v~~Ss~~vy~~~~~~~~~E~~ 181 (364)
..+|.|+|+++............ . ....++..++. ..+.+++|++||...+...
T Consensus 84 ~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~--------- 154 (249)
T PRK12827 84 EFGRLDILVNNAGIATDAAFAELSIEEWDDVIDVNLDGFFNVTQAALPPMIRARRGGRIVNIASVAGVRGN--------- 154 (249)
T ss_pred HhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCCeEEEEECCchhcCCC---------
Confidence 35899999997654321111111 1 11223444443 4566789999987654321
Q ss_pred CCCCCChhHHHHHHHHHHHHHhhhh---cCCcEEEEEecceecCCCChH---HHHHHhcCcccccccccCCcccccccHH
Q 017914 182 PANPTTELGRLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRSSV---DTIIKQLPLSEGQKMRRARQYTSRIHVD 255 (364)
Q Consensus 182 ~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~i~v~ 255 (364)
.+...|+.+|.+.+.+++.++.+ .+++++++|||.+.++..... ..+....+ ...+.+.+
T Consensus 155 --~~~~~y~~sK~a~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~~~~~~~~~~~~~~------------~~~~~~~~ 220 (249)
T PRK12827 155 --RGQVNYAASKAGLIGLTKTLANELAPRGITVNAVAPGAINTPMADNAAPTEHLLNPVP------------VQRLGEPD 220 (249)
T ss_pred --CCCchhHHHHHHHHHHHHHHHHHhhhhCcEEEEEEECCcCCCcccccchHHHHHhhCC------------CcCCcCHH
Confidence 13357999999999998887654 489999999999998753211 11111111 11235789
Q ss_pred HHHHHHHHHccCC---CCCceEEEeCCC
Q 017914 256 DICQVLSASIDKP---SAWNVYNVVDDD 280 (364)
Q Consensus 256 Dva~~~~~~l~~~---~~g~~~~i~~~~ 280 (364)
|+|++++.++... -.|+.+++.+|.
T Consensus 221 ~va~~~~~l~~~~~~~~~g~~~~~~~g~ 248 (249)
T PRK12827 221 EVAALVAFLVSDAASYVTGQVIPVDGGF 248 (249)
T ss_pred HHHHHHHHHcCcccCCccCcEEEeCCCC
Confidence 9999999988653 237888887653
|
|
| >PRK06701 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.71 E-value=1.7e-15 Score=135.08 Aligned_cols=206 Identities=13% Similarity=0.035 Sum_probs=134.6
Q ss_pred CCCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchh-hhh----hhh--CCceEEEccCChhhH--Hhh-------
Q 017914 56 WQSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMK-KKE----LEQ--SGFDVHLFNANETAL--MIL------- 118 (364)
Q Consensus 56 ~~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~-~~~----l~~--~~~~~~~~D~~~~~~--~~~------- 118 (364)
...+|+||||| +|+||.+++++|+++|++|++++|+... ... +.. ..+.++.+|+++.+. ..+
T Consensus 43 ~~~~k~iLItGasggIG~~la~~l~~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~~ 122 (290)
T PRK06701 43 KLKGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVEKEGVKCLLIPGDVSDEAFCKDAVEETVREL 122 (290)
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 44568999999 9999999999999999999999987532 111 111 246788999999663 222
Q ss_pred ccCceeeEEEEecCCCCCCCCh-----hhhHHH------HHHHHhhc--CCccEEEEEccceeecCCCCccccCCCCCCC
Q 017914 119 TTLKNYTHLLVSIPPLEGTGDP-----MLKHGE------LLRSTLMN--GHLQWLGYLSSTGVYGHSGGAWVDEDYPANP 185 (364)
Q Consensus 119 ~~~d~v~~~~~~~~~~~~~~~~-----~~~~~~------~l~~a~~~--~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~ 185 (364)
..+|+++|+++.........+. ...... ++..++.. ....++|++||...|.....
T Consensus 123 ~~iD~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~g~iV~isS~~~~~~~~~----------- 191 (290)
T PRK06701 123 GRLDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQGSAIINTGSITGYEGNET----------- 191 (290)
T ss_pred CCCCEEEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhhCCeEEEEecccccCCCCC-----------
Confidence 3579999998764332221111 111222 23333321 12258999999876643221
Q ss_pred CChhHHHHHHHHHHHHHhhhhc---CCcEEEEEecceecCCCCh--HHHHHHhcCcccccccccCCcccccccHHHHHHH
Q 017914 186 TTELGRLRLSAEKGWLNLGRDL---GISAQVFRLGGIYGPGRSS--VDTIIKQLPLSEGQKMRRARQYTSRIHVDDICQV 260 (364)
Q Consensus 186 ~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilRp~~v~g~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~ 260 (364)
...|+.+|.+.+.+++.++... |++++.++||.++.+.... ....... . ........+.+++|+|++
T Consensus 192 ~~~Y~~sK~a~~~l~~~la~~~~~~gIrv~~i~pG~v~T~~~~~~~~~~~~~~--~------~~~~~~~~~~~~~dva~~ 263 (290)
T PRK06701 192 LIDYSATKGAIHAFTRSLAQSLVQKGIRVNAVAPGPIWTPLIPSDFDEEKVSQ--F------GSNTPMQRPGQPEELAPA 263 (290)
T ss_pred cchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCCCCCcccccccCHHHHHH--H------HhcCCcCCCcCHHHHHHH
Confidence 2469999999999999988653 8999999999988763210 0111110 0 011122346889999999
Q ss_pred HHHHccCCC---CCceEEEeCCC
Q 017914 261 LSASIDKPS---AWNVYNVVDDD 280 (364)
Q Consensus 261 ~~~~l~~~~---~g~~~~i~~~~ 280 (364)
++.++.... .|+++++.++.
T Consensus 264 ~~~ll~~~~~~~~G~~i~idgg~ 286 (290)
T PRK06701 264 YVFLASPDSSYITGQMLHVNGGV 286 (290)
T ss_pred HHHHcCcccCCccCcEEEeCCCc
Confidence 999998753 47888887764
|
|
| >PRK12939 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.71 E-value=1.1e-15 Score=133.37 Aligned_cols=205 Identities=13% Similarity=0.014 Sum_probs=135.1
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhh----h--CCceEEEccCChhhH--Hhh-------cc
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELE----Q--SGFDVHLFNANETAL--MIL-------TT 120 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~----~--~~~~~~~~D~~~~~~--~~~-------~~ 120 (364)
..+++||||| +|.||++++++|+++|++|++++|+.++...+. . .++.++.+|++|.+. ..+ ..
T Consensus 5 ~~~~~vlItGa~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 84 (250)
T PRK12939 5 LAGKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAAGGRAHAIAADLADPASVQRFFDAAAAALGG 84 (250)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 3458999999 899999999999999999999999876544332 1 357889999999764 222 36
Q ss_pred CceeeEEEEecCCCCCCCChhh----hHH------HHHHHHh----hcCCccEEEEEccceeecCCCCccccCCCCCCCC
Q 017914 121 LKNYTHLLVSIPPLEGTGDPML----KHG------ELLRSTL----MNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANPT 186 (364)
Q Consensus 121 ~d~v~~~~~~~~~~~~~~~~~~----~~~------~~l~~a~----~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~ 186 (364)
+|+|+|+++............. ... .++..++ .+.+..++|++||...+.... ..
T Consensus 85 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~-----------~~ 153 (250)
T PRK12939 85 LDGLVNNAGITNSKSATELDIDTWDAVMNVNVRGTFLMLRAALPHLRDSGRGRIVNLASDTALWGAP-----------KL 153 (250)
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEECchhhccCCC-----------Cc
Confidence 8999999876443211111111 111 1233232 233345899999865432211 23
Q ss_pred ChhHHHHHHHHHHHHHhhhh---cCCcEEEEEecceecCCCChHH--HHHHhcCcccccccccCCcccccccHHHHHHHH
Q 017914 187 TELGRLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRSSVD--TIIKQLPLSEGQKMRRARQYTSRIHVDDICQVL 261 (364)
Q Consensus 187 ~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~ 261 (364)
..|+.+|...|.+++.++.+ .++++++++||.+..+...... .+.... ........+++++|+|+++
T Consensus 154 ~~y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~dva~~~ 225 (250)
T PRK12939 154 GAYVASKGAVIGMTRSLARELGGRGITVNAIAPGLTATEATAYVPADERHAYY--------LKGRALERLQVPDDVAGAV 225 (250)
T ss_pred chHHHHHHHHHHHHHHHHHHHhhhCEEEEEEEECCCCCccccccCChHHHHHH--------HhcCCCCCCCCHHHHHHHH
Confidence 57999999999999887643 4799999999988765422111 111100 0111234568899999999
Q ss_pred HHHccCC---CCCceEEEeCCC
Q 017914 262 SASIDKP---SAWNVYNVVDDD 280 (364)
Q Consensus 262 ~~~l~~~---~~g~~~~i~~~~ 280 (364)
+.++... -.|+.+++.+|.
T Consensus 226 ~~l~~~~~~~~~G~~i~~~gg~ 247 (250)
T PRK12939 226 LFLLSDAARFVTGQLLPVNGGF 247 (250)
T ss_pred HHHhCccccCccCcEEEECCCc
Confidence 9999764 248899988764
|
|
| >PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.71 E-value=7.2e-16 Score=134.76 Aligned_cols=210 Identities=11% Similarity=0.018 Sum_probs=133.9
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCChhhH--Hhh-------ccCceeeE
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETAL--MIL-------TTLKNYTH 126 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~--~~~-------~~~d~v~~ 126 (364)
..++++|||| +|+||+.++++|+++|++|++++|+... .....+.++.+|+++.+. ..+ ..+|.++|
T Consensus 6 ~~~k~vlItGas~~iG~~la~~l~~~G~~v~~~~~~~~~---~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~ 82 (252)
T PRK08220 6 FSGKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAFLT---QEDYPFATFVLDVSDAAAVAQVCQRLLAETGPLDVLVN 82 (252)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecchhh---hcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 3457999999 9999999999999999999999998611 112457889999999763 222 34799999
Q ss_pred EEEecCCCCCCC----ChhhhHHH------HHHHH----hhcCCccEEEEEccceeecCCCCccccCCCCCCCCChhHHH
Q 017914 127 LLVSIPPLEGTG----DPMLKHGE------LLRST----LMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANPTTELGRL 192 (364)
Q Consensus 127 ~~~~~~~~~~~~----~~~~~~~~------~l~~a----~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~~s 192 (364)
+++......... +....... ++..+ +++.+.+++|++||..... +..+...|+.+
T Consensus 83 ~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~ss~~~~~-----------~~~~~~~Y~~s 151 (252)
T PRK08220 83 AAGILRMGATDSLSDEDWQQTFAVNAGGAFNLFRAVMPQFRRQRSGAIVTVGSNAAHV-----------PRIGMAAYGAS 151 (252)
T ss_pred CCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECCchhcc-----------CCCCCchhHHH
Confidence 987644321111 11111111 22222 2334556899999865331 12234689999
Q ss_pred HHHHHHHHHHhhhh---cCCcEEEEEecceecCCCChHHHHH--HhcCcc-cccccccCCcccccccHHHHHHHHHHHcc
Q 017914 193 RLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRSSVDTII--KQLPLS-EGQKMRRARQYTSRIHVDDICQVLSASID 266 (364)
Q Consensus 193 K~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~--~~~~~~-~~~~~~~~~~~~~~i~v~Dva~~~~~~l~ 266 (364)
|...|.+++.++.+ .++++++++||.++++....+.... ...... .............+++++|+|++++.++.
T Consensus 152 K~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~ 231 (252)
T PRK08220 152 KAALTSLAKCVGLELAPYGVRCNVVSPGSTDTDMQRTLWVDEDGEQQVIAGFPEQFKLGIPLGKIARPQEIANAVLFLAS 231 (252)
T ss_pred HHHHHHHHHHHHHHhhHhCeEEEEEecCcCcchhhhhhccchhhhhhhhhhHHHHHhhcCCCcccCCHHHHHHHHHHHhc
Confidence 99999999888765 6899999999999887532110000 000000 00000111123456899999999999987
Q ss_pred CCC---CCceEEEeCCC
Q 017914 267 KPS---AWNVYNVVDDD 280 (364)
Q Consensus 267 ~~~---~g~~~~i~~~~ 280 (364)
... .|+++.+.+|.
T Consensus 232 ~~~~~~~g~~i~~~gg~ 248 (252)
T PRK08220 232 DLASHITLQDIVVDGGA 248 (252)
T ss_pred chhcCccCcEEEECCCe
Confidence 542 37777777663
|
|
| >PRK09134 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.71 E-value=1.6e-15 Score=133.14 Aligned_cols=209 Identities=12% Similarity=0.072 Sum_probs=132.6
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCc-hhhhhhh------hCCceEEEccCChhhH--Hhh-------c
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNV-MKKKELE------QSGFDVHLFNANETAL--MIL-------T 119 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~-~~~~~l~------~~~~~~~~~D~~~~~~--~~~-------~ 119 (364)
.++|++|||| +|+||++++++|+++|++|+++.+.. +....+. ...+.++.+|++|.+. ..+ .
T Consensus 7 ~~~k~vlItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~ 86 (258)
T PRK09134 7 AAPRAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEALAAEIRALGRRAVALQADLADEAEVRALVARASAALG 86 (258)
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 4567999999 99999999999999999999887643 2222211 1347789999999663 222 3
Q ss_pred cCceeeEEEEecCCCCCCC----ChhhhHHHH------HHHHhh----cCCccEEEEEccceeecCCCCccccCCCCCCC
Q 017914 120 TLKNYTHLLVSIPPLEGTG----DPMLKHGEL------LRSTLM----NGHLQWLGYLSSTGVYGHSGGAWVDEDYPANP 185 (364)
Q Consensus 120 ~~d~v~~~~~~~~~~~~~~----~~~~~~~~~------l~~a~~----~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~ 185 (364)
.+|+|+|+++......... +.......| +..++. ..+.+++|+++|...+.... .
T Consensus 87 ~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~~s~~~~~~~p-----------~ 155 (258)
T PRK09134 87 PITLLVNNASLFEYDSAASFTRASWDRHMATNLRAPFVLAQAFARALPADARGLVVNMIDQRVWNLNP-----------D 155 (258)
T ss_pred CCCEEEECCcCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECchhhcCCCC-----------C
Confidence 4799999997543321111 111112222 222222 22345788887754332111 1
Q ss_pred CChhHHHHHHHHHHHHHhhhhc--CCcEEEEEecceecCCCChHHHHHHhcCcccccccccCCcccccccHHHHHHHHHH
Q 017914 186 TTELGRLRLSAEKGWLNLGRDL--GISAQVFRLGGIYGPGRSSVDTIIKQLPLSEGQKMRRARQYTSRIHVDDICQVLSA 263 (364)
Q Consensus 186 ~~~Y~~sK~~~E~~~~~~~~~~--~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~ 263 (364)
...|+.+|...|.+.+.++++. ++.+++++||.+..........+...... ... ....+++|+|++++.
T Consensus 156 ~~~Y~~sK~a~~~~~~~la~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~---~~~------~~~~~~~d~a~~~~~ 226 (258)
T PRK09134 156 FLSYTLSKAALWTATRTLAQALAPRIRVNAIGPGPTLPSGRQSPEDFARQHAA---TPL------GRGSTPEEIAAAVRY 226 (258)
T ss_pred chHHHHHHHHHHHHHHHHHHHhcCCcEEEEeecccccCCcccChHHHHHHHhc---CCC------CCCcCHHHHHHHHHH
Confidence 2479999999999999987643 48999999998876432211112111100 000 112679999999999
Q ss_pred HccCCC-CCceEEEeCCCCCCHH
Q 017914 264 SIDKPS-AWNVYNVVDDDPAPRE 285 (364)
Q Consensus 264 ~l~~~~-~g~~~~i~~~~~~s~~ 285 (364)
+++.+. .|+.|++.++..++|.
T Consensus 227 ~~~~~~~~g~~~~i~gg~~~~~~ 249 (258)
T PRK09134 227 LLDAPSVTGQMIAVDGGQHLAWL 249 (258)
T ss_pred HhcCCCcCCCEEEECCCeecccc
Confidence 998764 4789999888766654
|
|
| >PRK07454 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.71 E-value=1.4e-15 Score=132.00 Aligned_cols=189 Identities=11% Similarity=0.010 Sum_probs=126.9
Q ss_pred CCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhh------CCceEEEccCChhhH--Hhh-------ccC
Q 017914 58 SPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQ------SGFDVHLFNANETAL--MIL-------TTL 121 (364)
Q Consensus 58 ~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~------~~~~~~~~D~~~~~~--~~~-------~~~ 121 (364)
.++++|||| +|.||+.++++|+++|++|++++|+.++...+.+ .++.++.+|++|.+. ..+ ..+
T Consensus 5 ~~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 84 (241)
T PRK07454 5 SMPRALITGASSGIGKATALAFAKAGWDLALVARSQDALEALAAELRSTGVKAAAYSIDLSNPEAIAPGIAELLEQFGCP 84 (241)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 457899999 9999999999999999999999998766544321 357789999999763 222 358
Q ss_pred ceeeEEEEecCCCCCCCChhh----hH----------HHHHHHHhhcCCccEEEEEccceeecCCCCccccCCCCCCCCC
Q 017914 122 KNYTHLLVSIPPLEGTGDPML----KH----------GELLRSTLMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANPTT 187 (364)
Q Consensus 122 d~v~~~~~~~~~~~~~~~~~~----~~----------~~~l~~a~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~ 187 (364)
|+++|+++............. .. ...++..+.+.+.+++|++||...++... ...
T Consensus 85 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~-----------~~~ 153 (241)
T PRK07454 85 DVLINNAGMAYTGPLLEMPLSDWQWVIQLNLTSVFQCCSAVLPGMRARGGGLIINVSSIAARNAFP-----------QWG 153 (241)
T ss_pred CEEEECCCccCCCchhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCcEEEEEccHHhCcCCC-----------Ccc
Confidence 999999875432211111111 11 11233333445567999999987654321 336
Q ss_pred hhHHHHHHHHHHHHHhhh---hcCCcEEEEEecceecCCCChHHHHHHhcCcccccccccCCcccccccHHHHHHHHHHH
Q 017914 188 ELGRLRLSAEKGWLNLGR---DLGISAQVFRLGGIYGPGRSSVDTIIKQLPLSEGQKMRRARQYTSRIHVDDICQVLSAS 264 (364)
Q Consensus 188 ~Y~~sK~~~E~~~~~~~~---~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~ 264 (364)
.|+.+|...+.+.+.++. ..|++++++|||.+-.+.... ..... .. ....++..+|+|++++.+
T Consensus 154 ~Y~~sK~~~~~~~~~~a~e~~~~gi~v~~i~pg~i~t~~~~~-------~~~~~--~~----~~~~~~~~~~va~~~~~l 220 (241)
T PRK07454 154 AYCVSKAALAAFTKCLAEEERSHGIRVCTITLGAVNTPLWDT-------ETVQA--DF----DRSAMLSPEQVAQTILHL 220 (241)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhCCEEEEEecCcccCCcccc-------ccccc--cc----ccccCCCHHHHHHHHHHH
Confidence 799999999999887753 348999999999986543110 00000 00 011247899999999999
Q ss_pred ccCCCC
Q 017914 265 IDKPSA 270 (364)
Q Consensus 265 l~~~~~ 270 (364)
+..+..
T Consensus 221 ~~~~~~ 226 (241)
T PRK07454 221 AQLPPS 226 (241)
T ss_pred HcCCcc
Confidence 987744
|
|
| >PRK07577 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.71 E-value=1.8e-15 Score=130.78 Aligned_cols=197 Identities=10% Similarity=0.040 Sum_probs=130.2
Q ss_pred CCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCChhhH--Hhhc------cCceeeEEEE
Q 017914 59 PNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETAL--MILT------TLKNYTHLLV 129 (364)
Q Consensus 59 ~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~--~~~~------~~d~v~~~~~ 129 (364)
+++||||| +|+||++++++|+++|++|++++|+.... ...+++.+|++|.+. ..+. ++|+++|+++
T Consensus 3 ~k~vlItG~s~~iG~~ia~~l~~~G~~v~~~~r~~~~~-----~~~~~~~~D~~~~~~~~~~~~~~~~~~~~d~vi~~ag 77 (234)
T PRK07577 3 SRTVLVTGATKGIGLALSLRLANLGHQVIGIARSAIDD-----FPGELFACDLADIEQTAATLAQINEIHPVDAIVNNVG 77 (234)
T ss_pred CCEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCcccc-----cCceEEEeeCCCHHHHHHHHHHHHHhCCCcEEEECCC
Confidence 47899999 99999999999999999999999986542 223678999999763 2222 5799999987
Q ss_pred ecCCCCCCC----ChhhhH----------HHHHHHHhhcCCccEEEEEccceeecCCCCccccCCCCCCCCChhHHHHHH
Q 017914 130 SIPPLEGTG----DPMLKH----------GELLRSTLMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANPTTELGRLRLS 195 (364)
Q Consensus 130 ~~~~~~~~~----~~~~~~----------~~~l~~a~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~~sK~~ 195 (364)
......... +..... ...+...+++.+.+++|++||...|+.. ....|+.+|..
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~------------~~~~Y~~sK~a 145 (234)
T PRK07577 78 IALPQPLGKIDLAALQDVYDLNVRAAVQVTQAFLEGMKLREQGRIVNICSRAIFGAL------------DRTSYSAAKSA 145 (234)
T ss_pred CCCCCChHHCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEccccccCCC------------CchHHHHHHHH
Confidence 644322111 111111 1223344445567799999998766432 23579999999
Q ss_pred HHHHHHHhhhh---cCCcEEEEEecceecCCCChH----HHHHHhcCcccccccccCCcccccccHHHHHHHHHHHccCC
Q 017914 196 AEKGWLNLGRD---LGISAQVFRLGGIYGPGRSSV----DTIIKQLPLSEGQKMRRARQYTSRIHVDDICQVLSASIDKP 268 (364)
Q Consensus 196 ~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~ 268 (364)
.|.+++.++.+ .|++++++|||.+..+..... ...... ..... ....+...+|+|.+++.++..+
T Consensus 146 ~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~--~~~~~------~~~~~~~~~~~a~~~~~l~~~~ 217 (234)
T PRK07577 146 LVGCTRTWALELAEYGITVNAVAPGPIETELFRQTRPVGSEEEKR--VLASI------PMRRLGTPEEVAAAIAFLLSDD 217 (234)
T ss_pred HHHHHHHHHHHHHhhCcEEEEEecCcccCcccccccccchhHHHH--HhhcC------CCCCCcCHHHHHHHHHHHhCcc
Confidence 99998887643 489999999999876531100 000000 00000 0111246899999999999765
Q ss_pred ---CCCceEEEeCCC
Q 017914 269 ---SAWNVYNVVDDD 280 (364)
Q Consensus 269 ---~~g~~~~i~~~~ 280 (364)
..|+.+.+.++.
T Consensus 218 ~~~~~g~~~~~~g~~ 232 (234)
T PRK07577 218 AGFITGQVLGVDGGG 232 (234)
T ss_pred cCCccceEEEecCCc
Confidence 237888887654
|
|
| >PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=99.70 E-value=2.4e-15 Score=131.04 Aligned_cols=203 Identities=11% Similarity=-0.012 Sum_probs=130.2
Q ss_pred CCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhh-hh----hh--hCCceEEEccCChhhH--Hhh-------cc
Q 017914 58 SPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKK-KE----LE--QSGFDVHLFNANETAL--MIL-------TT 120 (364)
Q Consensus 58 ~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~-~~----l~--~~~~~~~~~D~~~~~~--~~~-------~~ 120 (364)
.+++||||| +|+||+++++.|+++|++|+++.|+..+. .. +. ...+.++.+|+++.+. ..+ ..
T Consensus 4 ~~~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 83 (248)
T PRK05557 4 EGKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGALGGKALAVQGDVSDAESVERAVDEAKAEFGG 83 (248)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 457999999 99999999999999999998888865431 11 21 1356788899999763 222 35
Q ss_pred CceeeEEEEecCCCCCCCChhh----------hHHHHHHHHh----hcCCccEEEEEccce-eecCCCCccccCCCCCCC
Q 017914 121 LKNYTHLLVSIPPLEGTGDPML----------KHGELLRSTL----MNGHLQWLGYLSSTG-VYGHSGGAWVDEDYPANP 185 (364)
Q Consensus 121 ~d~v~~~~~~~~~~~~~~~~~~----------~~~~~l~~a~----~~~~~~r~v~~Ss~~-vy~~~~~~~~~E~~~~~~ 185 (364)
+|+|+|+++............. ....++..++ .+.+.+++|++||.. +++.. .
T Consensus 84 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~iss~~~~~~~~------------~ 151 (248)
T PRK05557 84 VDILVNNAGITRDNLLMRMKEEDWDRVIDTNLTGVFNLTKAVARPMMKQRSGRIINISSVVGLMGNP------------G 151 (248)
T ss_pred CCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcccccCcCCC------------C
Confidence 7999999876543221111111 1112233333 345567899998853 33321 2
Q ss_pred CChhHHHHHHHHHHHHHhhh---hcCCcEEEEEecceecCCCCh-HHHHHHhcCcccccccccCCcccccccHHHHHHHH
Q 017914 186 TTELGRLRLSAEKGWLNLGR---DLGISAQVFRLGGIYGPGRSS-VDTIIKQLPLSEGQKMRRARQYTSRIHVDDICQVL 261 (364)
Q Consensus 186 ~~~Y~~sK~~~E~~~~~~~~---~~~~~~~ilRp~~v~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~ 261 (364)
...|+.+|...|.+++.+++ ..++++++++||.+.++.... ...+.... . .. .....+.+++|+|+++
T Consensus 152 ~~~y~~sk~a~~~~~~~~a~~~~~~~i~~~~v~pg~~~~~~~~~~~~~~~~~~-~-~~------~~~~~~~~~~~va~~~ 223 (248)
T PRK05557 152 QANYAASKAGVIGFTKSLARELASRGITVNAVAPGFIETDMTDALPEDVKEAI-L-AQ------IPLGRLGQPEEIASAV 223 (248)
T ss_pred CchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCccCCccccccChHHHHHH-H-hc------CCCCCCcCHHHHHHHH
Confidence 35799999999988887764 347999999999886543221 11111110 0 00 0112357899999999
Q ss_pred HHHccCC---CCCceEEEeCCC
Q 017914 262 SASIDKP---SAWNVYNVVDDD 280 (364)
Q Consensus 262 ~~~l~~~---~~g~~~~i~~~~ 280 (364)
..++... ..|+.|++.++.
T Consensus 224 ~~l~~~~~~~~~g~~~~i~~~~ 245 (248)
T PRK05557 224 AFLASDEAAYITGQTLHVNGGM 245 (248)
T ss_pred HHHcCcccCCccccEEEecCCc
Confidence 8888653 247899998763
|
|
| >PRK06128 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.70 E-value=1.1e-15 Score=136.94 Aligned_cols=207 Identities=12% Similarity=0.035 Sum_probs=134.8
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchh--hhh----hhh--CCceEEEccCChhhH--Hh-------h
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMK--KKE----LEQ--SGFDVHLFNANETAL--MI-------L 118 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~--~~~----l~~--~~~~~~~~D~~~~~~--~~-------~ 118 (364)
..+++||||| +|+||++++++|+++|++|++..|+.+. ... +.. .++.++.+|++|.+. .. +
T Consensus 53 l~~k~vlITGas~gIG~~~a~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 132 (300)
T PRK06128 53 LQGRKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLKDEAFCRQLVERAVKEL 132 (300)
T ss_pred cCCCEEEEecCCCcHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHHHHHHh
Confidence 4468999999 9999999999999999999888765332 111 111 246788899999663 22 2
Q ss_pred ccCceeeEEEEecCCCCCC-----CChhhhHHHHH------HHHhhc--CCccEEEEEccceeecCCCCccccCCCCCCC
Q 017914 119 TTLKNYTHLLVSIPPLEGT-----GDPMLKHGELL------RSTLMN--GHLQWLGYLSSTGVYGHSGGAWVDEDYPANP 185 (364)
Q Consensus 119 ~~~d~v~~~~~~~~~~~~~-----~~~~~~~~~~l------~~a~~~--~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~ 185 (364)
..+|+++|+++........ .+.......|+ ..++.. ....++|++||...|.... .
T Consensus 133 g~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~~sS~~~~~~~~-----------~ 201 (300)
T PRK06128 133 GGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPPGASIINTGSIQSYQPSP-----------T 201 (300)
T ss_pred CCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCcCCEEEEECCccccCCCC-----------C
Confidence 3689999999754322211 11112222333 233321 1225899999987764322 2
Q ss_pred CChhHHHHHHHHHHHHHhhhh---cCCcEEEEEecceecCCCCh---HHHHHHhcCcccccccccCCcccccccHHHHHH
Q 017914 186 TTELGRLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRSS---VDTIIKQLPLSEGQKMRRARQYTSRIHVDDICQ 259 (364)
Q Consensus 186 ~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~ 259 (364)
...|+.+|.+.+.+++.++.+ .|+++++|+||.+.++.... ....... +. .......+.+.+|+|.
T Consensus 202 ~~~Y~asK~a~~~~~~~la~el~~~gI~v~~v~PG~i~t~~~~~~~~~~~~~~~--~~------~~~p~~r~~~p~dva~ 273 (300)
T PRK06128 202 LLDYASTKAAIVAFTKALAKQVAEKGIRVNAVAPGPVWTPLQPSGGQPPEKIPD--FG------SETPMKRPGQPVEMAP 273 (300)
T ss_pred chhHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEECcCcCCCcccCCCCHHHHHH--Hh------cCCCCCCCcCHHHHHH
Confidence 356999999999999988754 48999999999998875211 1111111 00 0111223467999999
Q ss_pred HHHHHccCCC---CCceEEEeCCCCC
Q 017914 260 VLSASIDKPS---AWNVYNVVDDDPA 282 (364)
Q Consensus 260 ~~~~~l~~~~---~g~~~~i~~~~~~ 282 (364)
+++.++.... .|++|++.+|..+
T Consensus 274 ~~~~l~s~~~~~~~G~~~~v~gg~~~ 299 (300)
T PRK06128 274 LYVLLASQESSYVTGEVFGVTGGLLL 299 (300)
T ss_pred HHHHHhCccccCccCcEEeeCCCEeC
Confidence 9999887643 3899999887654
|
|
| >COG2910 Putative NADH-flavin reductase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.70 E-value=1.9e-15 Score=118.64 Aligned_cols=204 Identities=17% Similarity=0.123 Sum_probs=143.1
Q ss_pred CeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCChhhH--HhhccCceeeEEEEecCCCCC
Q 017914 60 NRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETAL--MILTTLKNYTHLLVSIPPLEG 136 (364)
Q Consensus 60 ~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~--~~~~~~d~v~~~~~~~~~~~~ 136 (364)
|+|.|+| ||.+|++|++++.++||+|++++|++.+.... .++.+++.|+.|+.. ..+.+.|+|+...+.....
T Consensus 1 mKIaiIgAsG~~Gs~i~~EA~~RGHeVTAivRn~~K~~~~--~~~~i~q~Difd~~~~a~~l~g~DaVIsA~~~~~~~-- 76 (211)
T COG2910 1 MKIAIIGASGKAGSRILKEALKRGHEVTAIVRNASKLAAR--QGVTILQKDIFDLTSLASDLAGHDAVISAFGAGASD-- 76 (211)
T ss_pred CeEEEEecCchhHHHHHHHHHhCCCeeEEEEeChHhcccc--ccceeecccccChhhhHhhhcCCceEEEeccCCCCC--
Confidence 7899999 99999999999999999999999999887655 678899999999886 8899999999877643211
Q ss_pred CCChhhhHHHHHHHHhhcCCccEEEEEcccee-ecCCCCccccCCCCCCCCChhHHHHHHHHHHHHHhhhhcCCcEEEEE
Q 017914 137 TGDPMLKHGELLRSTLMNGHLQWLGYLSSTGV-YGHSGGAWVDEDYPANPTTELGRLRLSAEKGWLNLGRDLGISAQVFR 215 (364)
Q Consensus 137 ~~~~~~~~~~~l~~a~~~~~~~r~v~~Ss~~v-y~~~~~~~~~E~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR 215 (364)
...........++..++..++.|++-++.++- |-... .--.+.|.-|...|...+..+|.+ ..+..+..++|+.+-
T Consensus 77 ~~~~~~k~~~~li~~l~~agv~RllVVGGAGSL~id~g--~rLvD~p~fP~ey~~~A~~~ae~L-~~Lr~~~~l~WTfvS 153 (211)
T COG2910 77 NDELHSKSIEALIEALKGAGVPRLLVVGGAGSLEIDEG--TRLVDTPDFPAEYKPEALAQAEFL-DSLRAEKSLDWTFVS 153 (211)
T ss_pred hhHHHHHHHHHHHHHHhhcCCeeEEEEcCccceEEcCC--ceeecCCCCchhHHHHHHHHHHHH-HHHhhccCcceEEeC
Confidence 11112233456777788889999998876543 32222 122345666777888888888743 233334569999999
Q ss_pred ecceecCCCChHHHHHHhcCcccccccccCCcccccccHHHHHHHHHHHccCCCC-CceEEE
Q 017914 216 LGGIYGPGRSSVDTIIKQLPLSEGQKMRRARQYTSRIHVDDICQVLSASIDKPSA-WNVYNV 276 (364)
Q Consensus 216 p~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~~-g~~~~i 276 (364)
|+.++-|++..-. ..++..... ....--++|+..|.|-+++.-++++.. .+.|.+
T Consensus 154 Paa~f~PGerTg~-----yrlggD~ll-~n~~G~SrIS~aDYAiA~lDe~E~~~h~rqRftv 209 (211)
T COG2910 154 PAAFFEPGERTGN-----YRLGGDQLL-VNAKGESRISYADYAIAVLDELEKPQHIRQRFTV 209 (211)
T ss_pred cHHhcCCccccCc-----eEeccceEE-EcCCCceeeeHHHHHHHHHHHHhcccccceeeee
Confidence 9999988643111 111111111 111223559999999999999999854 556654
|
|
| >PRK06179 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.70 E-value=9.1e-16 Score=135.56 Aligned_cols=202 Identities=11% Similarity=0.047 Sum_probs=130.5
Q ss_pred CCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCChhhH--Hhh-------ccCceeeEEE
Q 017914 59 PNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETAL--MIL-------TTLKNYTHLL 128 (364)
Q Consensus 59 ~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~--~~~-------~~~d~v~~~~ 128 (364)
+++|+||| +|+||++++++|+++|++|++++|+.+..... .+++++.+|++|++. ..+ ..+|.++|++
T Consensus 4 ~~~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~--~~~~~~~~D~~d~~~~~~~~~~~~~~~g~~d~li~~a 81 (270)
T PRK06179 4 SKVALVTGASSGIGRATAEKLARAGYRVFGTSRNPARAAPI--PGVELLELDVTDDASVQAAVDEVIARAGRIDVLVNNA 81 (270)
T ss_pred CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCChhhcccc--CCCeeEEeecCCHHHHHHHHHHHHHhCCCCCEEEECC
Confidence 46899999 99999999999999999999999987654432 578899999999764 333 3479999998
Q ss_pred EecCCCCCCCCh----hhhHHH----------HHHHHhhcCCccEEEEEccceeecCCCCccccCCCCCCCCChhHHHHH
Q 017914 129 VSIPPLEGTGDP----MLKHGE----------LLRSTLMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANPTTELGRLRL 194 (364)
Q Consensus 129 ~~~~~~~~~~~~----~~~~~~----------~l~~a~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~~sK~ 194 (364)
+........... ...... .++..+++.+.+++|++||...+... .....|+.+|.
T Consensus 82 g~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~-----------~~~~~Y~~sK~ 150 (270)
T PRK06179 82 GVGLAGAAEESSIAQAQALFDTNVFGILRMTRAVLPHMRAQGSGRIINISSVLGFLPA-----------PYMALYAASKH 150 (270)
T ss_pred CCCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEECCccccCCC-----------CCccHHHHHHH
Confidence 764332111111 111111 22222455677899999997544221 12357999999
Q ss_pred HHHHHHHHhhh---hcCCcEEEEEecceecCCCCh-------HHHHHHhcCcccccccccCCcccccccHHHHHHHHHHH
Q 017914 195 SAEKGWLNLGR---DLGISAQVFRLGGIYGPGRSS-------VDTIIKQLPLSEGQKMRRARQYTSRIHVDDICQVLSAS 264 (364)
Q Consensus 195 ~~E~~~~~~~~---~~~~~~~ilRp~~v~g~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~ 264 (364)
..|.+++.++. ..|+++++++||.+.++.... +..+.... ....... ..........+|+|+.++.+
T Consensus 151 a~~~~~~~l~~el~~~gi~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~~~~~~va~~~~~~ 227 (270)
T PRK06179 151 AVEGYSESLDHEVRQFGIRVSLVEPAYTKTNFDANAPEPDSPLAEYDRER-AVVSKAV--AKAVKKADAPEVVADTVVKA 227 (270)
T ss_pred HHHHHHHHHHHHHhhhCcEEEEEeCCCcccccccccCCCCCcchhhHHHH-HHHHHHH--HhccccCCCHHHHHHHHHHH
Confidence 99999888754 358999999999987753210 00000000 0000000 00011236689999999999
Q ss_pred ccCCCCCceEEE
Q 017914 265 IDKPSAWNVYNV 276 (364)
Q Consensus 265 l~~~~~g~~~~i 276 (364)
+..+..+..|..
T Consensus 228 ~~~~~~~~~~~~ 239 (270)
T PRK06179 228 ALGPWPKMRYTA 239 (270)
T ss_pred HcCCCCCeeEec
Confidence 988766666654
|
|
| >PRK08324 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.69 E-value=1.4e-15 Score=150.57 Aligned_cols=214 Identities=11% Similarity=0.046 Sum_probs=140.2
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhh-----CCceEEEccCChhhH--Hhh-------ccC
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQ-----SGFDVHLFNANETAL--MIL-------TTL 121 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~-----~~~~~~~~D~~~~~~--~~~-------~~~ 121 (364)
..+++||||| +|+||+++++.|.++|++|++++|+.+....+.. .++.++.+|++|.+. ..+ .++
T Consensus 420 l~gk~vLVTGasggIG~~la~~L~~~Ga~Vvl~~r~~~~~~~~~~~l~~~~~v~~v~~Dvtd~~~v~~~~~~~~~~~g~i 499 (681)
T PRK08324 420 LAGKVALVTGAAGGIGKATAKRLAAEGACVVLADLDEEAAEAAAAELGGPDRALGVACDVTDEAAVQAAFEEAALAFGGV 499 (681)
T ss_pred CCCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHhccCcEEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence 4568999999 8999999999999999999999998776544322 267889999999663 222 368
Q ss_pred ceeeEEEEecCCCCCCCChhh----------hHHHHH----HHHhhcCCc-cEEEEEccceeecCCCCccccCCCCCCCC
Q 017914 122 KNYTHLLVSIPPLEGTGDPML----------KHGELL----RSTLMNGHL-QWLGYLSSTGVYGHSGGAWVDEDYPANPT 186 (364)
Q Consensus 122 d~v~~~~~~~~~~~~~~~~~~----------~~~~~l----~~a~~~~~~-~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~ 186 (364)
|+|+|+++............. ....++ ...++..+. .+||++||...+... ...
T Consensus 500 DvvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~~g~iV~vsS~~~~~~~-----------~~~ 568 (681)
T PRK08324 500 DIVVSNAGIAISGPIEETSDEDWRRSFDVNATGHFLVAREAVRIMKAQGLGGSIVFIASKNAVNPG-----------PNF 568 (681)
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCcEEEEECCccccCCC-----------CCc
Confidence 999999976443221111111 111222 222334343 689999986544221 123
Q ss_pred ChhHHHHHHHHHHHHHhhhhc---CCcEEEEEeccee-cCCC--ChH-HHHHHhcCcccc---cccccCCcccccccHHH
Q 017914 187 TELGRLRLSAEKGWLNLGRDL---GISAQVFRLGGIY-GPGR--SSV-DTIIKQLPLSEG---QKMRRARQYTSRIHVDD 256 (364)
Q Consensus 187 ~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilRp~~v~-g~~~--~~~-~~~~~~~~~~~~---~~~~~~~~~~~~i~v~D 256 (364)
..|+.+|...+.+++.++.+. |+++++++|+.+| +.+. ... ........+... .....+.....+++++|
T Consensus 569 ~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~Pg~v~~~t~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~v~~~D 648 (681)
T PRK08324 569 GAYGAAKAAELHLVRQLALELGPDGIRVNGVNPDAVVRGSGIWTGEWIEARAAAYGLSEEELEEFYRARNLLKREVTPED 648 (681)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcccCeEEEEEeCceeecCCccccchhhhhhhhhccCChHHHHHHHHhcCCcCCccCHHH
Confidence 689999999999999887543 6999999999998 4431 111 000000001100 11233455677899999
Q ss_pred HHHHHHHHccC--C-CCCceEEEeCCCC
Q 017914 257 ICQVLSASIDK--P-SAWNVYNVVDDDP 281 (364)
Q Consensus 257 va~~~~~~l~~--~-~~g~~~~i~~~~~ 281 (364)
+|++++.++.. . ..|++|++.+|..
T Consensus 649 vA~a~~~l~s~~~~~~tG~~i~vdgG~~ 676 (681)
T PRK08324 649 VAEAVVFLASGLLSKTTGAIITVDGGNA 676 (681)
T ss_pred HHHHHHHHhCccccCCcCCEEEECCCch
Confidence 99999998842 2 3488999988754
|
|
| >PRK09291 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.69 E-value=1.6e-15 Score=133.04 Aligned_cols=199 Identities=10% Similarity=-0.018 Sum_probs=124.5
Q ss_pred CCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhh------CCceEEEccCChhhH--Hhhc-cCceeeEEE
Q 017914 59 PNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQ------SGFDVHLFNANETAL--MILT-TLKNYTHLL 128 (364)
Q Consensus 59 ~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~------~~~~~~~~D~~~~~~--~~~~-~~d~v~~~~ 128 (364)
+++||||| +|+||++++++|+++|++|++++|+..+...+.. .++.++.+|++|++. ..+. .+|.|+|++
T Consensus 2 ~~~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~id~vi~~a 81 (257)
T PRK09291 2 SKTILITGAGSGFGREVALRLARKGHNVIAGVQIAPQVTALRAEAARRGLALRVEKLDLTDAIDRAQAAEWDVDVLLNNA 81 (257)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeeCCCHHHHHHHhcCCCCEEEECC
Confidence 56899999 9999999999999999999999998765443321 357889999999764 3443 799999998
Q ss_pred EecCCCCCCCChhh----hH----------HHHHHHHhhcCCccEEEEEccceeecCCCCccccCCCCCCCCChhHHHHH
Q 017914 129 VSIPPLEGTGDPML----KH----------GELLRSTLMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANPTTELGRLRL 194 (364)
Q Consensus 129 ~~~~~~~~~~~~~~----~~----------~~~l~~a~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~~sK~ 194 (364)
+............. .. ..+++..+.+.+.+++|++||...+... .....|+.+|.
T Consensus 82 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~SS~~~~~~~-----------~~~~~Y~~sK~ 150 (257)
T PRK09291 82 GIGEAGAVVDIPVELVRELFETNVFGPLELTQGFVRKMVARGKGKVVFTSSMAGLITG-----------PFTGAYCASKH 150 (257)
T ss_pred CcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEcChhhccCC-----------CCcchhHHHHH
Confidence 75432211111111 11 1233344445566899999986432111 12357999999
Q ss_pred HHHHHHHHhhh---hcCCcEEEEEecceecCCCC-hHHHHHHhcCcccc-cccccCCcccccccHHHHHHHHHHHccCC
Q 017914 195 SAEKGWLNLGR---DLGISAQVFRLGGIYGPGRS-SVDTIIKQLPLSEG-QKMRRARQYTSRIHVDDICQVLSASIDKP 268 (364)
Q Consensus 195 ~~E~~~~~~~~---~~~~~~~ilRp~~v~g~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~i~v~Dva~~~~~~l~~~ 268 (364)
..|.+++.+.. ..|+++++||||.+..+... ....+......... ...........++..+|++..++.++..+
T Consensus 151 a~~~~~~~l~~~~~~~gi~~~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 229 (257)
T PRK09291 151 ALEAIAEAMHAELKPFGIQVATVNPGPYLTGFNDTMAETPKRWYDPARNFTDPEDLAFPLEQFDPQEMIDAMVEVIPAD 229 (257)
T ss_pred HHHHHHHHHHHHHHhcCcEEEEEecCcccccchhhhhhhhhhhcchhhHHHhhhhhhccccCCCHHHHHHHHHHHhcCC
Confidence 99998877654 35899999999987432211 11111110000000 00011112234478888888888887654
|
|
| >PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.69 E-value=2.2e-15 Score=131.19 Aligned_cols=204 Identities=13% Similarity=-0.030 Sum_probs=131.4
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEE-EeCchhhhhhhh------CCceEEEccCChhhH--Hhh-------c
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGT-CTNVMKKKELEQ------SGFDVHLFNANETAL--MIL-------T 119 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~-~r~~~~~~~l~~------~~~~~~~~D~~~~~~--~~~-------~ 119 (364)
.++++||||| +|+||+++++.|+++|++|+++ +|+.++...+.. ..+.++.+|++|++. ..+ .
T Consensus 3 ~~~~~ilI~Gasg~iG~~la~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 82 (247)
T PRK05565 3 LMGKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKEEGGDAIAVKADVSSEEDVENLVEQIVEKFG 82 (247)
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhC
Confidence 4567999999 9999999999999999999999 887665433221 347789999999763 222 2
Q ss_pred cCceeeEEEEecCCCCCCCCh----hhhHH----------HHHHHHhhcCCccEEEEEccceeecCCCCccccCCCCCCC
Q 017914 120 TLKNYTHLLVSIPPLEGTGDP----MLKHG----------ELLRSTLMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANP 185 (364)
Q Consensus 120 ~~d~v~~~~~~~~~~~~~~~~----~~~~~----------~~l~~a~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~ 185 (364)
.+|+|+|+++........... ..... ..+...+...+.+++|++||...+.... .
T Consensus 83 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~~~~-----------~ 151 (247)
T PRK05565 83 KIDILVNNAGISNFGLVTDMTDEEWDRVIDVNLTGVMLLTRYALPYMIKRKSGVIVNISSIWGLIGAS-----------C 151 (247)
T ss_pred CCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCHhhccCCC-----------C
Confidence 689999999765321111111 11111 1222223345567899999865432211 2
Q ss_pred CChhHHHHHHHHHHHHHhhhh---cCCcEEEEEecceecCCCChHH-HHHHhcCcccccccccCCcccccccHHHHHHHH
Q 017914 186 TTELGRLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRSSVD-TIIKQLPLSEGQKMRRARQYTSRIHVDDICQVL 261 (364)
Q Consensus 186 ~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~ 261 (364)
...|+.+|...+.+++.+++. .|++++++|||.+..+....+. ..... +... .....+...+|+++++
T Consensus 152 ~~~y~~sK~a~~~~~~~~~~~~~~~gi~~~~v~pg~v~t~~~~~~~~~~~~~--~~~~------~~~~~~~~~~~va~~~ 223 (247)
T PRK05565 152 EVLYSASKGAVNAFTKALAKELAPSGIRVNAVAPGAIDTEMWSSFSEEDKEG--LAEE------IPLGRLGKPEEIAKVV 223 (247)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEEECCccCccccccChHHHHH--HHhc------CCCCCCCCHHHHHHHH
Confidence 347999999998888877653 4899999999998654322111 11110 0000 0112347889999999
Q ss_pred HHHccCCC---CCceEEEeCC
Q 017914 262 SASIDKPS---AWNVYNVVDD 279 (364)
Q Consensus 262 ~~~l~~~~---~g~~~~i~~~ 279 (364)
+.++.... .|+.+++.++
T Consensus 224 ~~l~~~~~~~~~g~~~~~~~~ 244 (247)
T PRK05565 224 LFLASDDASYITGQIITVDGG 244 (247)
T ss_pred HHHcCCccCCccCcEEEecCC
Confidence 99997653 3788887765
|
|
| >PLN02253 xanthoxin dehydrogenase | Back alignment and domain information |
|---|
Probab=99.69 E-value=1.5e-15 Score=134.96 Aligned_cols=214 Identities=8% Similarity=-0.053 Sum_probs=134.5
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhh-----CCceEEEccCChhhH--Hhh-------ccC
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQ-----SGFDVHLFNANETAL--MIL-------TTL 121 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~-----~~~~~~~~D~~~~~~--~~~-------~~~ 121 (364)
..++++|||| +|+||++++++|+++|++|++++|+.+....+.. .++.++.+|++|.+. ..+ ..+
T Consensus 16 l~~k~~lItGas~gIG~~la~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~g~i 95 (280)
T PLN02253 16 LLGKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDSLGGEPNVCFFHCDVTVEDDVSRAVDFTVDKFGTL 95 (280)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCCCceEEEEeecCCHHHHHHHHHHHHHHhCCC
Confidence 4568999999 9999999999999999999999997654433221 357889999999764 222 368
Q ss_pred ceeeEEEEecCCC-CCC-----CChhhhHHHHHHH------Hhh----cCCccEEEEEccce-eecCCCCccccCCCCCC
Q 017914 122 KNYTHLLVSIPPL-EGT-----GDPMLKHGELLRS------TLM----NGHLQWLGYLSSTG-VYGHSGGAWVDEDYPAN 184 (364)
Q Consensus 122 d~v~~~~~~~~~~-~~~-----~~~~~~~~~~l~~------a~~----~~~~~r~v~~Ss~~-vy~~~~~~~~~E~~~~~ 184 (364)
|.++|+++..... ... .+.......|+.. ++. ..+..++|++||.. .++..
T Consensus 96 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~------------ 163 (280)
T PLN02253 96 DIMVNNAGLTGPPCPDIRNVELSEFEKVFDVNVKGVFLGMKHAARIMIPLKKGSIVSLCSVASAIGGL------------ 163 (280)
T ss_pred CEEEECCCcCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCceEEEecChhhcccCC------------
Confidence 9999998764321 111 1111222233322 221 22345789987754 23211
Q ss_pred CCChhHHHHHHHHHHHHHhhhhc---CCcEEEEEecceecCCCC-h------HHHHHHhcCcccccccccCCc-cccccc
Q 017914 185 PTTELGRLRLSAEKGWLNLGRDL---GISAQVFRLGGIYGPGRS-S------VDTIIKQLPLSEGQKMRRARQ-YTSRIH 253 (364)
Q Consensus 185 ~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilRp~~v~g~~~~-~------~~~~~~~~~~~~~~~~~~~~~-~~~~i~ 253 (364)
....|+.+|.+.|.+++.++.+. ++++.+++||.+..+... . ......... . ....... ....++
T Consensus 164 ~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~-~---~~~~~~~l~~~~~~ 239 (280)
T PLN02253 164 GPHAYTGSKHAVLGLTRSVAAELGKHGIRVNCVSPYAVPTALALAHLPEDERTEDALAGFR-A---FAGKNANLKGVELT 239 (280)
T ss_pred CCcccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccccccccccccccchhhhhhhhH-H---HhhcCCCCcCCCCC
Confidence 12479999999999999887653 799999999998765311 0 000000000 0 0000000 012378
Q ss_pred HHHHHHHHHHHccCCC---CCceEEEeCCCCCCHHH
Q 017914 254 VDDICQVLSASIDKPS---AWNVYNVVDDDPAPREE 286 (364)
Q Consensus 254 v~Dva~~~~~~l~~~~---~g~~~~i~~~~~~s~~e 286 (364)
++|+|++++.++.... .|+.+++.+|...+..+
T Consensus 240 ~~dva~~~~~l~s~~~~~i~G~~i~vdgG~~~~~~~ 275 (280)
T PLN02253 240 VDDVANAVLFLASDEARYISGLNLMIDGGFTCTNHS 275 (280)
T ss_pred HHHHHHHHHhhcCcccccccCcEEEECCchhhccch
Confidence 9999999999987643 37889988775444433
|
|
| >PRK08017 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.68 E-value=1.5e-15 Score=133.15 Aligned_cols=197 Identities=14% Similarity=0.062 Sum_probs=128.2
Q ss_pred CCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCChhhH--Hhh--------ccCceeeEE
Q 017914 59 PNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETAL--MIL--------TTLKNYTHL 127 (364)
Q Consensus 59 ~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~--~~~--------~~~d~v~~~ 127 (364)
+++||||| +|+||+++++.|+++|++|++++|+.++.+.+...+++.+.+|++|.+. ..+ ..+|.++|.
T Consensus 2 ~k~vlVtGasg~IG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~~~~ii~~ 81 (256)
T PRK08017 2 QKSVLITGCSSGIGLEAALELKRRGYRVLAACRKPDDVARMNSLGFTGILLDLDDPESVERAADEVIALTDNRLYGLFNN 81 (256)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHhHHHHhCCCeEEEeecCCHHHHHHHHHHHHHhcCCCCeEEEEC
Confidence 36899999 8999999999999999999999999877666655678899999998653 111 345788888
Q ss_pred EEecCCCCC----CCChhhhHHH----------HHHHHhhcCCccEEEEEccceeecCCCCccccCCCCCCCCChhHHHH
Q 017914 128 LVSIPPLEG----TGDPMLKHGE----------LLRSTLMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANPTTELGRLR 193 (364)
Q Consensus 128 ~~~~~~~~~----~~~~~~~~~~----------~l~~a~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~~sK 193 (364)
++....... ..+....... .+..++++.+.+++|++||...+.. ......|+.+|
T Consensus 82 ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~-----------~~~~~~Y~~sK 150 (256)
T PRK08017 82 AGFGVYGPLSTISRQQMEQQFSTNFFGTHQLTMLLLPAMLPHGEGRIVMTSSVMGLIS-----------TPGRGAYAASK 150 (256)
T ss_pred CCCCCccchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCEEEEEcCcccccC-----------CCCccHHHHHH
Confidence 764221110 0111111122 2345555667789999998633211 11346799999
Q ss_pred HHHHHHHHHhh---hhcCCcEEEEEecceecCCCChHHHHHHhcCcccccccccCCcccccccHHHHHHHHHHHccCCCC
Q 017914 194 LSAEKGWLNLG---RDLGISAQVFRLGGIYGPGRSSVDTIIKQLPLSEGQKMRRARQYTSRIHVDDICQVLSASIDKPSA 270 (364)
Q Consensus 194 ~~~E~~~~~~~---~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~~ 270 (364)
...|.+.+.++ ...+++++++|||.+..+.. ........ .......+...+.+++++|+++++..+++++..
T Consensus 151 ~~~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~---~~~~~~~~--~~~~~~~~~~~~~~~~~~d~a~~~~~~~~~~~~ 225 (256)
T PRK08017 151 YALEAWSDALRMELRHSGIKVSLIEPGPIRTRFT---DNVNQTQS--DKPVENPGIAARFTLGPEAVVPKLRHALESPKP 225 (256)
T ss_pred HHHHHHHHHHHHHHhhcCCEEEEEeCCCcccchh---hcccchhh--ccchhhhHHHhhcCCCHHHHHHHHHHHHhCCCC
Confidence 99999877553 34589999999988754321 11111000 000001122335679999999999999987755
Q ss_pred C
Q 017914 271 W 271 (364)
Q Consensus 271 g 271 (364)
.
T Consensus 226 ~ 226 (256)
T PRK08017 226 K 226 (256)
T ss_pred C
Confidence 3
|
|
| >PRK06523 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.68 E-value=2.4e-15 Score=132.14 Aligned_cols=214 Identities=10% Similarity=0.025 Sum_probs=135.5
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCChhhH--H-------hhccCceeeE
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETAL--M-------ILTTLKNYTH 126 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~--~-------~~~~~d~v~~ 126 (364)
..+++||||| +|+||++++++|.++|++|++++|+..... ..++.++.+|++|.+. . .+..+|+++|
T Consensus 7 ~~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~r~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~ 83 (260)
T PRK06523 7 LAGKRALVTGGTKGIGAATVARLLEAGARVVTTARSRPDDL---PEGVEFVAADLTTAEGCAAVARAVLERLGGVDILVH 83 (260)
T ss_pred CCCCEEEEECCCCchhHHHHHHHHHCCCEEEEEeCChhhhc---CCceeEEecCCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 4468999999 999999999999999999999999865421 2457889999999663 1 1245799999
Q ss_pred EEEecCCC-CCC-----CChhhhHHHHH----------HHHhhcCCccEEEEEccceeecCCCCccccCCCCCCCCChhH
Q 017914 127 LLVSIPPL-EGT-----GDPMLKHGELL----------RSTLMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANPTTELG 190 (364)
Q Consensus 127 ~~~~~~~~-~~~-----~~~~~~~~~~l----------~~a~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~ 190 (364)
+++..... ... .+.......|+ +..+++.+..++|++||...+... ......|+
T Consensus 84 ~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~----------~~~~~~Y~ 153 (260)
T PRK06523 84 VLGGSSAPAGGFAALTDEEWQDELNLNLLAAVRLDRALLPGMIARGSGVIIHVTSIQRRLPL----------PESTTAYA 153 (260)
T ss_pred CCcccccCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEecccccCCC----------CCCcchhH
Confidence 98753211 111 11111122232 233334455789999987544221 11346799
Q ss_pred HHHHHHHHHHHHhhhh---cCCcEEEEEecceecCCCCh-HHHHHHhcCccccc---cc---ccCCcccccccHHHHHHH
Q 017914 191 RLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRSS-VDTIIKQLPLSEGQ---KM---RRARQYTSRIHVDDICQV 260 (364)
Q Consensus 191 ~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~-~~~~~~~~~~~~~~---~~---~~~~~~~~~i~v~Dva~~ 260 (364)
.+|...+.+++.++.+ .|+++++++||.+.++.... ...+.......... .+ ........+...+|+|++
T Consensus 154 ~sK~a~~~l~~~~a~~~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~va~~ 233 (260)
T PRK06523 154 AAKAALSTYSKSLSKEVAPKGVRVNTVSPGWIETEAAVALAERLAEAAGTDYEGAKQIIMDSLGGIPLGRPAEPEEVAEL 233 (260)
T ss_pred HHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCccHHHHHHHHHhhcCCCHHHHHHHHHHHhccCccCCCCCHHHHHHH
Confidence 9999999999888754 47999999999998765221 11111100000000 00 000011224678999999
Q ss_pred HHHHccCC---CCCceEEEeCCCCCC
Q 017914 261 LSASIDKP---SAWNVYNVVDDDPAP 283 (364)
Q Consensus 261 ~~~~l~~~---~~g~~~~i~~~~~~s 283 (364)
++.++... -.|+.+.+.+|...+
T Consensus 234 ~~~l~s~~~~~~~G~~~~vdgg~~~~ 259 (260)
T PRK06523 234 IAFLASDRAASITGTEYVIDGGTVPT 259 (260)
T ss_pred HHHHhCcccccccCceEEecCCccCC
Confidence 99998754 238899988876544
|
|
| >PRK10538 malonic semialdehyde reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.68 E-value=2.7e-15 Score=130.86 Aligned_cols=194 Identities=15% Similarity=0.095 Sum_probs=126.6
Q ss_pred CeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhh---CCceEEEccCChhhH--Hhh-------ccCceeeE
Q 017914 60 NRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQ---SGFDVHLFNANETAL--MIL-------TTLKNYTH 126 (364)
Q Consensus 60 ~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~---~~~~~~~~D~~~~~~--~~~-------~~~d~v~~ 126 (364)
|+|+||| +|+||.++++.|+++|++|++++|++++...+.. .++.++.+|++|.+. ..+ ..+|.++|
T Consensus 1 ~~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~vi~ 80 (248)
T PRK10538 1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWRNIDVLVN 80 (248)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhccceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 6899999 9999999999999999999999998876555432 357889999999653 222 36899999
Q ss_pred EEEecCCCCCC-----CChhhhH----------HHHHHHHhhcCCccEEEEEccceeecCCCCccccCCCCCCCCChhHH
Q 017914 127 LLVSIPPLEGT-----GDPMLKH----------GELLRSTLMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANPTTELGR 191 (364)
Q Consensus 127 ~~~~~~~~~~~-----~~~~~~~----------~~~l~~a~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~~ 191 (364)
+++........ .+..... ..++..++...+.+++|++||...+. +..+...|+.
T Consensus 81 ~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~-----------~~~~~~~Y~~ 149 (248)
T PRK10538 81 NAGLALGLEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSW-----------PYAGGNVYGA 149 (248)
T ss_pred CCCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCcccCC-----------CCCCCchhHH
Confidence 98753211111 1111111 22344444456677999999865331 1223468999
Q ss_pred HHHHHHHHHHHhhhh---cCCcEEEEEecceecCCCChHHHHHHhcCcccccccccCCcccccccHHHHHHHHHHHccCC
Q 017914 192 LRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRSSVDTIIKQLPLSEGQKMRRARQYTSRIHVDDICQVLSASIDKP 268 (364)
Q Consensus 192 sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~ 268 (364)
+|...|.+.+.++.+ .++.+++++||.+.+....... ........... .. ...++..+|+|++++.++..+
T Consensus 150 sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~i~~~~~~~~~--~~~~~~~~~~~-~~---~~~~~~~~dvA~~~~~l~~~~ 223 (248)
T PRK10538 150 TKAFVRQFSLNLRTDLHGTAVRVTDIEPGLVGGTEFSNVR--FKGDDGKAEKT-YQ---NTVALTPEDVSEAVWWVATLP 223 (248)
T ss_pred HHHHHHHHHHHHHHHhcCCCcEEEEEeCCeecccccchhh--ccCcHHHHHhh-cc---ccCCCCHHHHHHHHHHHhcCC
Confidence 999999999888654 4799999999998755321000 00000000000 00 113478999999999999766
Q ss_pred CC
Q 017914 269 SA 270 (364)
Q Consensus 269 ~~ 270 (364)
..
T Consensus 224 ~~ 225 (248)
T PRK10538 224 AH 225 (248)
T ss_pred Cc
Confidence 33
|
|
| >PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed | Back alignment and domain information |
|---|
Probab=99.68 E-value=4.7e-15 Score=129.01 Aligned_cols=205 Identities=13% Similarity=0.026 Sum_probs=130.6
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhh---CCceEEEccCChhhH--Hh-------hccCce
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQ---SGFDVHLFNANETAL--MI-------LTTLKN 123 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~---~~~~~~~~D~~~~~~--~~-------~~~~d~ 123 (364)
..++++|||| +|+||+++++.|.++|+.|++..|+.++...+.. .++.++.+|+++.+. .. +..+|.
T Consensus 4 ~~~~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 83 (245)
T PRK12936 4 LSGRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAELGERVKIFPANLSDRDEVKALGQKAEADLEGVDI 83 (245)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 3457999999 9999999999999999999998888766544322 357788999998663 22 245899
Q ss_pred eeEEEEecCCCCCCC----ChhhhHHH------HHHHH----hhcCCccEEEEEccce-eecCCCCccccCCCCCCCCCh
Q 017914 124 YTHLLVSIPPLEGTG----DPMLKHGE------LLRST----LMNGHLQWLGYLSSTG-VYGHSGGAWVDEDYPANPTTE 188 (364)
Q Consensus 124 v~~~~~~~~~~~~~~----~~~~~~~~------~l~~a----~~~~~~~r~v~~Ss~~-vy~~~~~~~~~E~~~~~~~~~ 188 (364)
|+|+++......... +....... ++..+ +...+.+++|++||.. .++.. ....
T Consensus 84 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~------------~~~~ 151 (245)
T PRK12936 84 LVNNAGITKDGLFVRMSDEDWDSVLEVNLTATFRLTRELTHPMMRRRYGRIINITSVVGVTGNP------------GQAN 151 (245)
T ss_pred EEECCCCCCCCccccCCHHHHHHHHhhccHHHHHHHHHHHHHHHHhCCCEEEEECCHHhCcCCC------------CCcc
Confidence 999987644321111 11111111 22222 2234567899999864 33321 1246
Q ss_pred hHHHHHHHHHHHHHhhhh---cCCcEEEEEecceecCCCChHHHHHHhcCcccccccccCCcccccccHHHHHHHHHHHc
Q 017914 189 LGRLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRSSVDTIIKQLPLSEGQKMRRARQYTSRIHVDDICQVLSASI 265 (364)
Q Consensus 189 Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l 265 (364)
|+.+|...+.+++.++.+ .++++++++||.+..+............ .... .....+.+.+|++++++.++
T Consensus 152 Y~~sk~a~~~~~~~la~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~-~~~~------~~~~~~~~~~~ia~~~~~l~ 224 (245)
T PRK12936 152 YCASKAGMIGFSKSLAQEIATRNVTVNCVAPGFIESAMTGKLNDKQKEA-IMGA------IPMKRMGTGAEVASAVAYLA 224 (245)
T ss_pred hHHHHHHHHHHHHHHHHHhhHhCeEEEEEEECcCcCchhcccChHHHHH-HhcC------CCCCCCcCHHHHHHHHHHHc
Confidence 999999988888776543 4799999999987654321111100000 0000 01122467899999998888
Q ss_pred cCCC---CCceEEEeCCC
Q 017914 266 DKPS---AWNVYNVVDDD 280 (364)
Q Consensus 266 ~~~~---~g~~~~i~~~~ 280 (364)
.... .|+.+++.+|.
T Consensus 225 ~~~~~~~~G~~~~~~~g~ 242 (245)
T PRK12936 225 SSEAAYVTGQTIHVNGGM 242 (245)
T ss_pred CccccCcCCCEEEECCCc
Confidence 6542 38899988763
|
|
| >PRK12824 acetoacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.67 E-value=5.5e-15 Score=128.57 Aligned_cols=205 Identities=11% Similarity=0.030 Sum_probs=133.1
Q ss_pred CCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchh-hhhh-h-----hCCceEEEccCChhhH--Hhh-------ccC
Q 017914 59 PNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMK-KKEL-E-----QSGFDVHLFNANETAL--MIL-------TTL 121 (364)
Q Consensus 59 ~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~-~~~l-~-----~~~~~~~~~D~~~~~~--~~~-------~~~ 121 (364)
+++||||| +|+||+++++.|.++|++|++++|+... ...+ . ...+.++.+|+++.+. ..+ ..+
T Consensus 2 ~k~vlItG~s~~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~i 81 (245)
T PRK12824 2 KKIALVTGAKRGIGSAIARELLNDGYRVIATYFSGNDCAKDWFEEYGFTEDQVRLKELDVTDTEECAEALAEIEEEEGPV 81 (245)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 46899998 9999999999999999999999997431 1111 1 1347889999999663 222 358
Q ss_pred ceeeEEEEecCCCCCCCChhh----hHHH------H----HHHHhhcCCccEEEEEccceeecCCCCccccCCCCCCCCC
Q 017914 122 KNYTHLLVSIPPLEGTGDPML----KHGE------L----LRSTLMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANPTT 187 (364)
Q Consensus 122 d~v~~~~~~~~~~~~~~~~~~----~~~~------~----l~~a~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~ 187 (364)
|.++|+++............. .... + ++..++..+..+||++||...+.... ...
T Consensus 82 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~~~~~-----------~~~ 150 (245)
T PRK12824 82 DILVNNAGITRDSVFKRMSHQEWNDVINTNLNSVFNVTQPLFAAMCEQGYGRIINISSVNGLKGQF-----------GQT 150 (245)
T ss_pred CEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEECChhhccCCC-----------CCh
Confidence 999999876433211111111 1111 2 23344455677999999876553221 235
Q ss_pred hhHHHHHHHHHHHHHhhh---hcCCcEEEEEecceecCCCChH-HHHHHhcCcccccccccCCcccccccHHHHHHHHHH
Q 017914 188 ELGRLRLSAEKGWLNLGR---DLGISAQVFRLGGIYGPGRSSV-DTIIKQLPLSEGQKMRRARQYTSRIHVDDICQVLSA 263 (364)
Q Consensus 188 ~Y~~sK~~~E~~~~~~~~---~~~~~~~ilRp~~v~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~ 263 (364)
.|+.+|.+.+.+++.++. ..++++++++||.+.++..... ..+... +.. ......+...+|+++++..
T Consensus 151 ~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~--~~~------~~~~~~~~~~~~va~~~~~ 222 (245)
T PRK12824 151 NYSAAKAGMIGFTKALASEGARYGITVNCIAPGYIATPMVEQMGPEVLQS--IVN------QIPMKRLGTPEEIAAAVAF 222 (245)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCeEEEEEEEcccCCcchhhcCHHHHHH--HHh------cCCCCCCCCHHHHHHHHHH
Confidence 799999999998888764 3479999999999887643211 111110 000 0011234678999999988
Q ss_pred HccCCC---CCceEEEeCCCCC
Q 017914 264 SIDKPS---AWNVYNVVDDDPA 282 (364)
Q Consensus 264 ~l~~~~---~g~~~~i~~~~~~ 282 (364)
++.... .|+.+++.+|..+
T Consensus 223 l~~~~~~~~~G~~~~~~~g~~~ 244 (245)
T PRK12824 223 LVSEAAGFITGETISINGGLYM 244 (245)
T ss_pred HcCccccCccCcEEEECCCeec
Confidence 886542 3899999888643
|
|
| >TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase | Back alignment and domain information |
|---|
Probab=99.67 E-value=1e-14 Score=127.20 Aligned_cols=205 Identities=11% Similarity=-0.024 Sum_probs=131.3
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchh--hhhhhh--CCceEEEccCChhhH--Hhh-------ccCc
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMK--KKELEQ--SGFDVHLFNANETAL--MIL-------TTLK 122 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~--~~~l~~--~~~~~~~~D~~~~~~--~~~-------~~~d 122 (364)
..+++||||| +|+||++++++|+++|++|++++|+... ...+.. ..+.++.+|+++.+. ..+ ..+|
T Consensus 3 ~~~k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d 82 (248)
T TIGR01832 3 LEGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSEPSETQQQVEALGRRFLSLTADLSDIEAIKALVDSAVEEFGHID 82 (248)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence 3568999999 8999999999999999999999997532 111221 357889999999763 111 3589
Q ss_pred eeeEEEEecCCCCCCC----ChhhhHHHH------HHHHh----hcCC-ccEEEEEccceeecCCCCccccCCCCCCCCC
Q 017914 123 NYTHLLVSIPPLEGTG----DPMLKHGEL------LRSTL----MNGH-LQWLGYLSSTGVYGHSGGAWVDEDYPANPTT 187 (364)
Q Consensus 123 ~v~~~~~~~~~~~~~~----~~~~~~~~~------l~~a~----~~~~-~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~ 187 (364)
.++|+++......... +.......| +..++ ...+ .+++|++||...+.... ...
T Consensus 83 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~-----------~~~ 151 (248)
T TIGR01832 83 ILVNNAGIIRRADAEEFSEKDWDDVMNVNLKSVFFLTQAAAKHFLKQGRGGKIINIASMLSFQGGI-----------RVP 151 (248)
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEecHHhccCCC-----------CCc
Confidence 9999987654322111 111111222 22222 1233 46899999976654322 224
Q ss_pred hhHHHHHHHHHHHHHhhhh---cCCcEEEEEecceecCCCChHH--HHHHhcCcccccccccCCcccccccHHHHHHHHH
Q 017914 188 ELGRLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRSSVD--TIIKQLPLSEGQKMRRARQYTSRIHVDDICQVLS 262 (364)
Q Consensus 188 ~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~ 262 (364)
.|+.+|.+.+.+++.++++ .|+++++++||.+..+....+. ..... .... . .....|+..+|+|++++
T Consensus 152 ~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~-~~~~--~----~~~~~~~~~~dva~~~~ 224 (248)
T TIGR01832 152 SYTASKHGVAGLTKLLANEWAAKGINVNAIAPGYMATNNTQALRADEDRNA-AILE--R----IPAGRWGTPDDIGGPAV 224 (248)
T ss_pred hhHHHHHHHHHHHHHHHHHhCccCcEEEEEEECcCcCcchhccccChHHHH-HHHh--c----CCCCCCcCHHHHHHHHH
Confidence 6999999999999988765 3899999999998766421110 00000 0000 0 01235688999999999
Q ss_pred HHccCCC---CCceEEEeCC
Q 017914 263 ASIDKPS---AWNVYNVVDD 279 (364)
Q Consensus 263 ~~l~~~~---~g~~~~i~~~ 279 (364)
.++.... .|+++.+.+|
T Consensus 225 ~l~s~~~~~~~G~~i~~dgg 244 (248)
T TIGR01832 225 FLASSASDYVNGYTLAVDGG 244 (248)
T ss_pred HHcCccccCcCCcEEEeCCC
Confidence 9997543 3766666554
|
This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation. |
| >PRK05717 oxidoreductase; Validated | Back alignment and domain information |
|---|
Probab=99.67 E-value=7.5e-15 Score=128.57 Aligned_cols=206 Identities=13% Similarity=0.014 Sum_probs=132.5
Q ss_pred CCCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhh---CCceEEEccCChhhH--Hhh-------ccCc
Q 017914 56 WQSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQ---SGFDVHLFNANETAL--MIL-------TTLK 122 (364)
Q Consensus 56 ~~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~---~~~~~~~~D~~~~~~--~~~-------~~~d 122 (364)
...+++||||| +|+||++++++|+++|++|++++|+..+...+.+ ..+.++.+|+++.+. ..+ ..+|
T Consensus 7 ~~~~k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id 86 (255)
T PRK05717 7 GHNGRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERGSKVAKALGENAWFIAMDVADEAQVAAGVAEVLGQFGRLD 86 (255)
T ss_pred ccCCCEEEEeCCcchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHHHHHhCCCC
Confidence 45568999999 9999999999999999999999987654433221 357789999999653 111 3479
Q ss_pred eeeEEEEecCCCC-CCC-----ChhhhHH------HHHHHHhh---cCCccEEEEEccceeecCCCCccccCCCCCCCCC
Q 017914 123 NYTHLLVSIPPLE-GTG-----DPMLKHG------ELLRSTLM---NGHLQWLGYLSSTGVYGHSGGAWVDEDYPANPTT 187 (364)
Q Consensus 123 ~v~~~~~~~~~~~-~~~-----~~~~~~~------~~l~~a~~---~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~ 187 (364)
.++|+++...... ... +...... .++.+++. .....++|++||...+.... ...
T Consensus 87 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~ii~~sS~~~~~~~~-----------~~~ 155 (255)
T PRK05717 87 ALVCNAAIADPHNTTLESLSLAHWNRVLAVNLTGPMLLAKHCAPYLRAHNGAIVNLASTRARQSEP-----------DTE 155 (255)
T ss_pred EEEECCCcccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCcEEEEEcchhhcCCCC-----------CCc
Confidence 9999997654321 111 1111122 23444432 11235799998865432211 235
Q ss_pred hhHHHHHHHHHHHHHhhhhc--CCcEEEEEecceecCCCCh--HHHHHHhcCcccccccccCCcccccccHHHHHHHHHH
Q 017914 188 ELGRLRLSAEKGWLNLGRDL--GISAQVFRLGGIYGPGRSS--VDTIIKQLPLSEGQKMRRARQYTSRIHVDDICQVLSA 263 (364)
Q Consensus 188 ~Y~~sK~~~E~~~~~~~~~~--~~~~~ilRp~~v~g~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~ 263 (364)
.|+.+|.+.|.+++.++.+. ++++++++||.+.++.... ...+........ . ...+.+++|+|.+++.
T Consensus 156 ~Y~~sKaa~~~~~~~la~~~~~~i~v~~i~Pg~i~t~~~~~~~~~~~~~~~~~~~--~------~~~~~~~~~va~~~~~ 227 (255)
T PRK05717 156 AYAASKGGLLALTHALAISLGPEIRVNAVSPGWIDARDPSQRRAEPLSEADHAQH--P------AGRVGTVEDVAAMVAW 227 (255)
T ss_pred chHHHHHHHHHHHHHHHHHhcCCCEEEEEecccCcCCccccccchHHHHHHhhcC--C------CCCCcCHHHHHHHHHH
Confidence 79999999999999887664 5899999999998864211 011111000000 0 1124789999999998
Q ss_pred HccCCC---CCceEEEeCCC
Q 017914 264 SIDKPS---AWNVYNVVDDD 280 (364)
Q Consensus 264 ~l~~~~---~g~~~~i~~~~ 280 (364)
++.... .|+.+.+.++.
T Consensus 228 l~~~~~~~~~g~~~~~~gg~ 247 (255)
T PRK05717 228 LLSRQAGFVTGQEFVVDGGM 247 (255)
T ss_pred HcCchhcCccCcEEEECCCc
Confidence 887542 37788876653
|
|
| >PRK06123 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.67 E-value=7.1e-15 Score=128.16 Aligned_cols=202 Identities=12% Similarity=0.078 Sum_probs=125.7
Q ss_pred CCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeC-chhhhh----hhh--CCceEEEccCChhhH--Hhh-------ccC
Q 017914 59 PNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTN-VMKKKE----LEQ--SGFDVHLFNANETAL--MIL-------TTL 121 (364)
Q Consensus 59 ~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~-~~~~~~----l~~--~~~~~~~~D~~~~~~--~~~-------~~~ 121 (364)
++++|||| +|+||++++++|+++|+.|+...++ ++.... +.. ..+.++.+|++|.+. ..+ ..+
T Consensus 2 ~~~~lVtG~~~~iG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 81 (248)
T PRK06123 2 RKVMIITGASRGIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAIRRQGGEALAVAADVADEADVLRLFEAVDRELGRL 81 (248)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCeEEEecCCCHHHHHHHHHHHHhCCCcEEEEEeccCCHHHHHHHHHHHHHHhCCC
Confidence 46899999 9999999999999999998877643 332222 211 346788999999653 222 357
Q ss_pred ceeeEEEEecCCCCCCCCh-----hhhHHHHHH------HHhh----cC---CccEEEEEccce-eecCCCCccccCCCC
Q 017914 122 KNYTHLLVSIPPLEGTGDP-----MLKHGELLR------STLM----NG---HLQWLGYLSSTG-VYGHSGGAWVDEDYP 182 (364)
Q Consensus 122 d~v~~~~~~~~~~~~~~~~-----~~~~~~~l~------~a~~----~~---~~~r~v~~Ss~~-vy~~~~~~~~~E~~~ 182 (364)
|.++|+++.........+. ......|+. .++. .. .-.++|++||.. +++...
T Consensus 82 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~--------- 152 (248)
T PRK06123 82 DALVNNAGILEAQMRLEQMDAARLTRIFATNVVGSFLCAREAVKRMSTRHGGRGGAIVNVSSMAARLGSPG--------- 152 (248)
T ss_pred CEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCeEEEEECchhhcCCCCC---------
Confidence 9999999765432211111 111222322 2221 11 123699998864 343211
Q ss_pred CCCCChhHHHHHHHHHHHHHhhhh---cCCcEEEEEecceecCCCCh--HHHHHHhcCcccccccccCCcccccccHHHH
Q 017914 183 ANPTTELGRLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRSS--VDTIIKQLPLSEGQKMRRARQYTSRIHVDDI 257 (364)
Q Consensus 183 ~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dv 257 (364)
....|+.+|...|.+++.++.+ .+++++++|||.++++.... ....... .....++ .-+.+++|+
T Consensus 153 --~~~~Y~~sKaa~~~~~~~la~~~~~~~i~v~~i~pg~v~~~~~~~~~~~~~~~~--~~~~~p~------~~~~~~~d~ 222 (248)
T PRK06123 153 --EYIDYAASKGAIDTMTIGLAKEVAAEGIRVNAVRPGVIYTEIHASGGEPGRVDR--VKAGIPM------GRGGTAEEV 222 (248)
T ss_pred --CccchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCchhhccCCHHHHHH--HHhcCCC------CCCcCHHHH
Confidence 1135999999999999888754 38999999999999874211 1111111 0000000 112468999
Q ss_pred HHHHHHHccCC---CCCceEEEeCC
Q 017914 258 CQVLSASIDKP---SAWNVYNVVDD 279 (364)
Q Consensus 258 a~~~~~~l~~~---~~g~~~~i~~~ 279 (364)
+++++.++... ..|+.|++.++
T Consensus 223 a~~~~~l~~~~~~~~~g~~~~~~gg 247 (248)
T PRK06123 223 ARAILWLLSDEASYTTGTFIDVSGG 247 (248)
T ss_pred HHHHHHHhCccccCccCCEEeecCC
Confidence 99999988764 34889998765
|
|
| >PRK07825 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.67 E-value=5.1e-15 Score=131.03 Aligned_cols=186 Identities=10% Similarity=-0.056 Sum_probs=125.8
Q ss_pred CCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhh--CCceEEEccCChhhH--Hh-------hccCceee
Q 017914 58 SPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQ--SGFDVHLFNANETAL--MI-------LTTLKNYT 125 (364)
Q Consensus 58 ~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~--~~~~~~~~D~~~~~~--~~-------~~~~d~v~ 125 (364)
.+++||||| +|.||++++++|+++|++|++.+|++++...+.. ..+.++.+|++|++. .. ...+|.++
T Consensus 4 ~~~~ilVtGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li 83 (273)
T PRK07825 4 RGKVVAITGGARGIGLATARALAALGARVAIGDLDEALAKETAAELGLVVGGPLDVTDPASFAAFLDAVEADLGPIDVLV 83 (273)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhccceEEEccCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 457999999 9999999999999999999999998776554322 247889999999763 11 24579999
Q ss_pred EEEEecCCCCCCCChhh----hHHHH----------HHHHhhcCCccEEEEEccceeecCCCCccccCCCCCCCCChhHH
Q 017914 126 HLLVSIPPLEGTGDPML----KHGEL----------LRSTLMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANPTTELGR 191 (364)
Q Consensus 126 ~~~~~~~~~~~~~~~~~----~~~~~----------l~~a~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~~ 191 (364)
|+++............. ....| ++..+.+.+.+++|++||...+... .....|+.
T Consensus 84 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~~~~Y~a 152 (273)
T PRK07825 84 NNAGVMPVGPFLDEPDAVTRRILDVNVYGVILGSKLAAPRMVPRGRGHVVNVASLAGKIPV-----------PGMATYCA 152 (273)
T ss_pred ECCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEcCccccCCC-----------CCCcchHH
Confidence 99876443221111111 11122 3333445677799999997544221 13467999
Q ss_pred HHHHHHHHHHHhhh---hcCCcEEEEEecceecCCCChHHHHHHhcCcccccccccCCcccccccHHHHHHHHHHHccCC
Q 017914 192 LRLSAEKGWLNLGR---DLGISAQVFRLGGIYGPGRSSVDTIIKQLPLSEGQKMRRARQYTSRIHVDDICQVLSASIDKP 268 (364)
Q Consensus 192 sK~~~E~~~~~~~~---~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~ 268 (364)
+|...+.+.+.+.. ..|+++++++||.+-.+.. .... ......+++++|+|++++.++.++
T Consensus 153 sKaa~~~~~~~l~~el~~~gi~v~~v~Pg~v~t~~~-------~~~~---------~~~~~~~~~~~~va~~~~~~l~~~ 216 (273)
T PRK07825 153 SKHAVVGFTDAARLELRGTGVHVSVVLPSFVNTELI-------AGTG---------GAKGFKNVEPEDVAAAIVGTVAKP 216 (273)
T ss_pred HHHHHHHHHHHHHHHhhccCcEEEEEeCCcCcchhh-------cccc---------cccCCCCCCHHHHHHHHHHHHhCC
Confidence 99988887766643 3589999999998754321 1000 011234589999999999999876
Q ss_pred CC
Q 017914 269 SA 270 (364)
Q Consensus 269 ~~ 270 (364)
..
T Consensus 217 ~~ 218 (273)
T PRK07825 217 RP 218 (273)
T ss_pred CC
Confidence 43
|
|
| >PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.67 E-value=5.7e-15 Score=128.03 Aligned_cols=186 Identities=10% Similarity=-0.030 Sum_probs=124.5
Q ss_pred CCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhh----h--CCceEEEccCChhhH--Hhh-------ccC
Q 017914 58 SPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELE----Q--SGFDVHLFNANETAL--MIL-------TTL 121 (364)
Q Consensus 58 ~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~----~--~~~~~~~~D~~~~~~--~~~-------~~~ 121 (364)
.++++|||| +|+||.+++++|+++|++|++++|++.+...+. . .++.++.+|+++.+. ..+ ..+
T Consensus 6 ~~~~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 85 (239)
T PRK07666 6 QGKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEAYGVKVVIATADVSDYEEVTAAIEQLKNELGSI 85 (239)
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCeEEEEECCCCCHHHHHHHHHHHHHHcCCc
Confidence 357899999 999999999999999999999999876543321 1 257788999998763 222 368
Q ss_pred ceeeEEEEecCCCCCCCCh----hhhHHHH------HHHHh----hcCCccEEEEEccceeecCCCCccccCCCCCCCCC
Q 017914 122 KNYTHLLVSIPPLEGTGDP----MLKHGEL------LRSTL----MNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANPTT 187 (364)
Q Consensus 122 d~v~~~~~~~~~~~~~~~~----~~~~~~~------l~~a~----~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~ 187 (364)
|+|+|+++........... ......| +..++ ...+.+++|++||...+... .+..
T Consensus 86 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~~-----------~~~~ 154 (239)
T PRK07666 86 DILINNAGISKFGKFLELDPAEWEKIIQVNLMGVYYATRAVLPSMIERQSGDIINISSTAGQKGA-----------AVTS 154 (239)
T ss_pred cEEEEcCccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEEcchhhccCC-----------CCCc
Confidence 9999998764322111111 1111222 22222 24556789999886543221 1335
Q ss_pred hhHHHHHHHHHHHHHhhh---hcCCcEEEEEecceecCCCChHHHHHHhcCcccccccccCCcccccccHHHHHHHHHHH
Q 017914 188 ELGRLRLSAEKGWLNLGR---DLGISAQVFRLGGIYGPGRSSVDTIIKQLPLSEGQKMRRARQYTSRIHVDDICQVLSAS 264 (364)
Q Consensus 188 ~Y~~sK~~~E~~~~~~~~---~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~ 264 (364)
.|+.+|.+.+.+++.++. +.|++++++|||.+.++..... .... + ....++..+|+|++++.+
T Consensus 155 ~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~-------~~~~----~---~~~~~~~~~~~a~~~~~~ 220 (239)
T PRK07666 155 AYSASKFGVLGLTESLMQEVRKHNIRVTALTPSTVATDMAVDL-------GLTD----G---NPDKVMQPEDLAEFIVAQ 220 (239)
T ss_pred chHHHHHHHHHHHHHHHHHhhccCcEEEEEecCcccCcchhhc-------cccc----c---CCCCCCCHHHHHHHHHHH
Confidence 799999999999887764 3589999999999876532110 0000 0 112348899999999999
Q ss_pred ccCC
Q 017914 265 IDKP 268 (364)
Q Consensus 265 l~~~ 268 (364)
++.+
T Consensus 221 l~~~ 224 (239)
T PRK07666 221 LKLN 224 (239)
T ss_pred HhCC
Confidence 9876
|
|
| >PRK06841 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.67 E-value=7.8e-15 Score=128.48 Aligned_cols=206 Identities=7% Similarity=-0.099 Sum_probs=133.2
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhh---hhCCceEEEccCChhhH--Hhh-------ccCce
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKEL---EQSGFDVHLFNANETAL--MIL-------TTLKN 123 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l---~~~~~~~~~~D~~~~~~--~~~-------~~~d~ 123 (364)
..+++||||| +|+||++++++|+++|++|++++|+....... ....+..+.+|+++.+. ..+ ..+|+
T Consensus 13 ~~~k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~ 92 (255)
T PRK06841 13 LSGKVAVVTGGASGIGHAIAELFAAKGARVALLDRSEDVAEVAAQLLGGNAKGLVCDVSDSQSVEAAVAAVISAFGRIDI 92 (255)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence 4468999999 99999999999999999999999986543222 12345688999998663 222 35799
Q ss_pred eeEEEEecCCCCCCCChhh----hHH------HHHHHHh----hcCCccEEEEEccceeecCCCCccccCCCCCCCCChh
Q 017914 124 YTHLLVSIPPLEGTGDPML----KHG------ELLRSTL----MNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANPTTEL 189 (364)
Q Consensus 124 v~~~~~~~~~~~~~~~~~~----~~~------~~l~~a~----~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y 189 (364)
++|+++............. ... .++..++ ...+.+++|++||....... .....|
T Consensus 93 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~-----------~~~~~Y 161 (255)
T PRK06841 93 LVNSAGVALLAPAEDVSEEDWDKTIDINLKGSFLMAQAVGRHMIAAGGGKIVNLASQAGVVAL-----------ERHVAY 161 (255)
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHHHhcHHHHHHHHHHHHHHHhcCCceEEEEcchhhccCC-----------CCCchH
Confidence 9999976432211111111 111 2233332 23456799999986432111 123579
Q ss_pred HHHHHHHHHHHHHhhhh---cCCcEEEEEecceecCCCCh-HH-HHHHhcCcccccccccCCcccccccHHHHHHHHHHH
Q 017914 190 GRLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRSS-VD-TIIKQLPLSEGQKMRRARQYTSRIHVDDICQVLSAS 264 (364)
Q Consensus 190 ~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~ 264 (364)
+.+|.+.+.+.+.++.+ .|++++.|+||.+..+.... .. ..... +. .......+.+.+|+|++++.+
T Consensus 162 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~--~~------~~~~~~~~~~~~~va~~~~~l 233 (255)
T PRK06841 162 CASKAGVVGMTKVLALEWGPYGITVNAISPTVVLTELGKKAWAGEKGER--AK------KLIPAGRFAYPEEIAAAALFL 233 (255)
T ss_pred HHHHHHHHHHHHHHHHHHHhhCeEEEEEEeCcCcCcccccccchhHHHH--HH------hcCCCCCCcCHHHHHHHHHHH
Confidence 99999999999888765 48999999999987653211 00 00000 00 001123457899999999999
Q ss_pred ccCCC---CCceEEEeCCCC
Q 017914 265 IDKPS---AWNVYNVVDDDP 281 (364)
Q Consensus 265 l~~~~---~g~~~~i~~~~~ 281 (364)
+.... .|+++.+.+|..
T Consensus 234 ~~~~~~~~~G~~i~~dgg~~ 253 (255)
T PRK06841 234 ASDAAAMITGENLVIDGGYT 253 (255)
T ss_pred cCccccCccCCEEEECCCcc
Confidence 97653 388888877643
|
|
| >PRK07024 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.67 E-value=5.4e-15 Score=129.64 Aligned_cols=182 Identities=12% Similarity=0.018 Sum_probs=123.4
Q ss_pred CCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhh-----CCceEEEccCChhhH--Hhh-------ccCce
Q 017914 59 PNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQ-----SGFDVHLFNANETAL--MIL-------TTLKN 123 (364)
Q Consensus 59 ~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~-----~~~~~~~~D~~~~~~--~~~-------~~~d~ 123 (364)
+|+||||| +|+||+++++.|+++|++|++++|+.++...+.+ .++.++.+|++|.+. ..+ ..+|.
T Consensus 2 ~~~vlItGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g~id~ 81 (257)
T PRK07024 2 PLKVFITGASSGIGQALAREYARQGATLGLVARRTDALQAFAARLPKAARVSVYAADVRDADALAAAAADFIAAHGLPDV 81 (257)
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcccCCeeEEEEcCCCCHHHHHHHHHHHHHhCCCCCE
Confidence 57999999 9999999999999999999999998766544322 157889999999764 222 23799
Q ss_pred eeEEEEecCCCCCCC--C---hhhhHHHH----------HHHHhhcCCccEEEEEccceeecCCCCccccCCCCCCCCCh
Q 017914 124 YTHLLVSIPPLEGTG--D---PMLKHGEL----------LRSTLMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANPTTE 188 (364)
Q Consensus 124 v~~~~~~~~~~~~~~--~---~~~~~~~~----------l~~a~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~ 188 (364)
++|+++......... + .......| ++..+++.+.+++|++||...+... .....
T Consensus 82 lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~l~~~~~~~~~~iv~isS~~~~~~~-----------~~~~~ 150 (257)
T PRK07024 82 VIANAGISVGTLTEEREDLAVFREVMDTNYFGMVATFQPFIAPMRAARRGTLVGIASVAGVRGL-----------PGAGA 150 (257)
T ss_pred EEECCCcCCCccccccCCHHHHHHHHhHhcHHHHHHHHHHHHHHHhcCCCEEEEEechhhcCCC-----------CCCcc
Confidence 999987543211111 1 11111122 2334445566799999886533111 12357
Q ss_pred hHHHHHHHHHHHHHhh---hhcCCcEEEEEecceecCCCChHHHHHHhcCcccccccccCCcccccccHHHHHHHHHHHc
Q 017914 189 LGRLRLSAEKGWLNLG---RDLGISAQVFRLGGIYGPGRSSVDTIIKQLPLSEGQKMRRARQYTSRIHVDDICQVLSASI 265 (364)
Q Consensus 189 Y~~sK~~~E~~~~~~~---~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l 265 (364)
|+.+|...+.+++.++ +..|++++++|||.+.++... .... . ...++..+|+|+.++.++
T Consensus 151 Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~-------~~~~--~--------~~~~~~~~~~a~~~~~~l 213 (257)
T PRK07024 151 YSASKAAAIKYLESLRVELRPAGVRVVTIAPGYIRTPMTA-------HNPY--P--------MPFLMDADRFAARAARAI 213 (257)
T ss_pred hHHHHHHHHHHHHHHHHHhhccCcEEEEEecCCCcCchhh-------cCCC--C--------CCCccCHHHHHHHHHHHH
Confidence 9999999999998875 345899999999999765311 0000 0 001267999999999999
Q ss_pred cCC
Q 017914 266 DKP 268 (364)
Q Consensus 266 ~~~ 268 (364)
.+.
T Consensus 214 ~~~ 216 (257)
T PRK07024 214 ARG 216 (257)
T ss_pred hCC
Confidence 864
|
|
| >PRK06398 aldose dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.67 E-value=6e-15 Score=129.39 Aligned_cols=208 Identities=7% Similarity=-0.053 Sum_probs=130.7
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCChhhH--Hhh-------ccCceeeE
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETAL--MIL-------TTLKNYTH 126 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~--~~~-------~~~d~v~~ 126 (364)
..+++||||| +|.||++++++|.++|++|++++|+.... ..+.++.+|++|++. ..+ ..+|.++|
T Consensus 4 l~gk~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r~~~~~-----~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~li~ 78 (258)
T PRK06398 4 LKDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEPSY-----NDVDYFKVDVSNKEQVIKGIDYVISKYGRIDILVN 78 (258)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCcccc-----CceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 4568999999 99999999999999999999999976542 357889999999763 222 35899999
Q ss_pred EEEecCCCCCCCChhhh----HHHH------HH----HHhhcCCccEEEEEccceeecCCCCccccCCCCCCCCChhHHH
Q 017914 127 LLVSIPPLEGTGDPMLK----HGEL------LR----STLMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANPTTELGRL 192 (364)
Q Consensus 127 ~~~~~~~~~~~~~~~~~----~~~~------l~----~a~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~~s 192 (364)
+++.............. ...| +. ..+++.+..++|++||...+.. ......|+.+
T Consensus 79 ~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~-----------~~~~~~Y~~s 147 (258)
T PRK06398 79 NAGIESYGAIHAVEEDEWDRIINVNVNGIFLMSKYTIPYMLKQDKGVIINIASVQSFAV-----------TRNAAAYVTS 147 (258)
T ss_pred CCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeCcchhccC-----------CCCCchhhhh
Confidence 88754322111111111 1222 22 2222345679999999765432 1234689999
Q ss_pred HHHHHHHHHHhhhhc--CCcEEEEEecceecCCCChHHHHHHhc---Cccc-ccccccCCcccccccHHHHHHHHHHHcc
Q 017914 193 RLSAEKGWLNLGRDL--GISAQVFRLGGIYGPGRSSVDTIIKQL---PLSE-GQKMRRARQYTSRIHVDDICQVLSASID 266 (364)
Q Consensus 193 K~~~E~~~~~~~~~~--~~~~~ilRp~~v~g~~~~~~~~~~~~~---~~~~-~~~~~~~~~~~~~i~v~Dva~~~~~~l~ 266 (364)
|.+.+.+.+.++.+. +++++.++||.+-.+............ .... ............+...+|+|++++.++.
T Consensus 148 Kaal~~~~~~la~e~~~~i~vn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~eva~~~~~l~s 227 (258)
T PRK06398 148 KHAVLGLTRSIAVDYAPTIRCVAVCPGSIRTPLLEWAAELEVGKDPEHVERKIREWGEMHPMKRVGKPEEVAYVVAFLAS 227 (258)
T ss_pred HHHHHHHHHHHHHHhCCCCEEEEEecCCccchHHhhhhhccccCChhhhHHHHHhhhhcCCcCCCcCHHHHHHHHHHHcC
Confidence 999999999887654 389999999987554211000000000 0000 0000000111234679999999999987
Q ss_pred CCC---CCceEEEeCCC
Q 017914 267 KPS---AWNVYNVVDDD 280 (364)
Q Consensus 267 ~~~---~g~~~~i~~~~ 280 (364)
... .|+++.+.+|.
T Consensus 228 ~~~~~~~G~~i~~dgg~ 244 (258)
T PRK06398 228 DLASFITGECVTVDGGL 244 (258)
T ss_pred cccCCCCCcEEEECCcc
Confidence 542 37788777664
|
|
| >PRK08628 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.67 E-value=3.1e-15 Score=131.23 Aligned_cols=214 Identities=7% Similarity=-0.039 Sum_probs=133.9
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhh-----hCCceEEEccCChhhH--Hhh-------ccC
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELE-----QSGFDVHLFNANETAL--MIL-------TTL 121 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~-----~~~~~~~~~D~~~~~~--~~~-------~~~ 121 (364)
..+++||||| +|+||++++++|+++|++|++++|+.+...... ..++.++.+|+++.+. ..+ ..+
T Consensus 5 l~~~~ilItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 84 (258)
T PRK08628 5 LKDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDDEFAEELRALQPRAEFVQVDLTDDAQCRDAVEQTVAKFGRI 84 (258)
T ss_pred cCCCEEEEeCCCChHHHHHHHHHHHcCCcEEEEcCChhhHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcCCC
Confidence 4467999999 999999999999999999999999876542111 1357889999999763 222 357
Q ss_pred ceeeEEEEecCCCCCCCChhh----hHHHHH------HHHhh---cCCccEEEEEccceeecCCCCccccCCCCCCCCCh
Q 017914 122 KNYTHLLVSIPPLEGTGDPML----KHGELL------RSTLM---NGHLQWLGYLSSTGVYGHSGGAWVDEDYPANPTTE 188 (364)
Q Consensus 122 d~v~~~~~~~~~~~~~~~~~~----~~~~~l------~~a~~---~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~ 188 (364)
|.|+|+++...... ...... ....|+ ..++. ..+.++||++||...+.. ..+...
T Consensus 85 d~vi~~ag~~~~~~-~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~-----------~~~~~~ 152 (258)
T PRK08628 85 DGLVNNAGVNDGVG-LEAGREAFVASLERNLIHYYVMAHYCLPHLKASRGAIVNISSKTALTG-----------QGGTSG 152 (258)
T ss_pred CEEEECCcccCCCc-ccCCHHHHHHHHhhhhHHHHHHHHHHHHHhhccCcEEEEECCHHhccC-----------CCCCch
Confidence 99999997533211 111111 111222 22211 122368999998654321 113468
Q ss_pred hHHHHHHHHHHHHHhhh---hcCCcEEEEEecceecCCCChHHHHHHhcCccc---ccccccCCcccccccHHHHHHHHH
Q 017914 189 LGRLRLSAEKGWLNLGR---DLGISAQVFRLGGIYGPGRSSVDTIIKQLPLSE---GQKMRRARQYTSRIHVDDICQVLS 262 (364)
Q Consensus 189 Y~~sK~~~E~~~~~~~~---~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~i~v~Dva~~~~ 262 (364)
|+.+|...|.+++.++. ..+++++.|+||.++++... .+.....-.. ............++..+|+|++++
T Consensus 153 Y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~pg~v~t~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~ 229 (258)
T PRK08628 153 YAAAKGAQLALTREWAVALAKDGVRVNAVIPAEVMTPLYE---NWIATFDDPEAKLAAITAKIPLGHRMTTAEEIADTAV 229 (258)
T ss_pred hHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCccCCHHHH---HHhhhccCHHHHHHHHHhcCCccccCCCHHHHHHHHH
Confidence 99999999999998865 34899999999999886421 1111000000 000000000013578999999999
Q ss_pred HHccCC---CCCceEEEeCCCCCCHHH
Q 017914 263 ASIDKP---SAWNVYNVVDDDPAPREE 286 (364)
Q Consensus 263 ~~l~~~---~~g~~~~i~~~~~~s~~e 286 (364)
.++... ..|+.|.+.++ ...+++
T Consensus 230 ~l~~~~~~~~~g~~~~~~gg-~~~~~~ 255 (258)
T PRK08628 230 FLLSERSSHTTGQWLFVDGG-YVHLDR 255 (258)
T ss_pred HHhChhhccccCceEEecCC-cccccc
Confidence 999765 23777877655 344443
|
|
| >PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.66 E-value=1.4e-14 Score=127.05 Aligned_cols=204 Identities=8% Similarity=-0.032 Sum_probs=132.2
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhh----hh--CCceEEEccCChhhH--Hhh-------cc
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKEL----EQ--SGFDVHLFNANETAL--MIL-------TT 120 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l----~~--~~~~~~~~D~~~~~~--~~~-------~~ 120 (364)
..+++||||| +|+||.+++++|+++|++|+++.|+ ++.+.+ .. ..+.++.+|+++.+. ..+ ..
T Consensus 13 l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~ 91 (258)
T PRK06935 13 LDGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHG-TNWDETRRLIEKEGRKVTFVQVDLTKPESAEKVVKEALEEFGK 91 (258)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC-cHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 4568999999 9999999999999999999999987 332222 11 357789999999663 222 35
Q ss_pred CceeeEEEEecCCCCCCCChh----hhHHHH----------HHHHhhcCCccEEEEEccceeecCCCCccccCCCCCCCC
Q 017914 121 LKNYTHLLVSIPPLEGTGDPM----LKHGEL----------LRSTLMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANPT 186 (364)
Q Consensus 121 ~d~v~~~~~~~~~~~~~~~~~----~~~~~~----------l~~a~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~ 186 (364)
+|.++|+++............ .....| +...++..+.+++|++||...+.... ..
T Consensus 92 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~-----------~~ 160 (258)
T PRK06935 92 IDILVNNAGTIRRAPLLEYKDEDWNAVMDINLNSVYHLSQAVAKVMAKQGSGKIINIASMLSFQGGK-----------FV 160 (258)
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCeEEEEECCHHhccCCC-----------Cc
Confidence 799999987643221111111 111122 22333355567999999976543221 22
Q ss_pred ChhHHHHHHHHHHHHHhhhh---cCCcEEEEEecceecCCCChHH---HHHHhcCcccccccccCCcccccccHHHHHHH
Q 017914 187 TELGRLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRSSVD---TIIKQLPLSEGQKMRRARQYTSRIHVDDICQV 260 (364)
Q Consensus 187 ~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~ 260 (364)
..|+.+|.+.|.+++.++++ .|+++++++||.+..+...... ..... ... .. ...-+...+|+|.+
T Consensus 161 ~~Y~asK~a~~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~--~~~--~~----~~~~~~~~~dva~~ 232 (258)
T PRK06935 161 PAYTASKHGVAGLTKAFANELAAYNIQVNAIAPGYIKTANTAPIRADKNRNDE--ILK--RI----PAGRWGEPDDLMGA 232 (258)
T ss_pred hhhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeccccccchhhcccChHHHHH--HHh--cC----CCCCCCCHHHHHHH
Confidence 47999999999999998764 3799999999998765321110 00000 000 00 11234778999999
Q ss_pred HHHHccCCC---CCceEEEeCCC
Q 017914 261 LSASIDKPS---AWNVYNVVDDD 280 (364)
Q Consensus 261 ~~~~l~~~~---~g~~~~i~~~~ 280 (364)
++.++.... .|+++.+.+|.
T Consensus 233 ~~~l~s~~~~~~~G~~i~~dgg~ 255 (258)
T PRK06935 233 AVFLASRASDYVNGHILAVDGGW 255 (258)
T ss_pred HHHHcChhhcCCCCCEEEECCCe
Confidence 999887543 37888877663
|
|
| >PRK07326 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.66 E-value=1.2e-14 Score=125.78 Aligned_cols=198 Identities=14% Similarity=0.008 Sum_probs=129.1
Q ss_pred CCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhh-----CCceEEEccCChhhH--Hhh-------ccCc
Q 017914 58 SPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQ-----SGFDVHLFNANETAL--MIL-------TTLK 122 (364)
Q Consensus 58 ~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~-----~~~~~~~~D~~~~~~--~~~-------~~~d 122 (364)
++++||||| +|+||++++++|+++|++|++++|++.+...+.. .++.++.+|+++.+. ..+ ..+|
T Consensus 5 ~~~~ilItGatg~iG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d 84 (237)
T PRK07326 5 KGKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNNKGNVLGLAADVRDEADVQRAVDAIVAAFGGLD 84 (237)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEeeCCHHHHHHHHHHHhccCcEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence 357899999 9999999999999999999999998765543321 457889999998663 222 3689
Q ss_pred eeeEEEEecCCCCCCCC----hhhhHH------HHHHHHhh---cCCccEEEEEccceeecCCCCccccCCCCCCCCChh
Q 017914 123 NYTHLLVSIPPLEGTGD----PMLKHG------ELLRSTLM---NGHLQWLGYLSSTGVYGHSGGAWVDEDYPANPTTEL 189 (364)
Q Consensus 123 ~v~~~~~~~~~~~~~~~----~~~~~~------~~l~~a~~---~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y 189 (364)
.|+|+++.......... ...... .++.+++. ..+.+++|++||...+.. ......|
T Consensus 85 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~-----------~~~~~~y 153 (237)
T PRK07326 85 VLIANAGVGHFAPVEELTPEEWRLVIDTNLTGAFYTIKAAVPALKRGGGYIINISSLAGTNF-----------FAGGAAY 153 (237)
T ss_pred EEEECCCCCCCCchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHHCCeEEEEECChhhccC-----------CCCCchH
Confidence 99999865332110000 111111 12222222 234568999998654321 1234579
Q ss_pred HHHHHHHHHHHHHhh---hhcCCcEEEEEecceecCCCChHHHHHHhcCcccccccccCCcccccccHHHHHHHHHHHcc
Q 017914 190 GRLRLSAEKGWLNLG---RDLGISAQVFRLGGIYGPGRSSVDTIIKQLPLSEGQKMRRARQYTSRIHVDDICQVLSASID 266 (364)
Q Consensus 190 ~~sK~~~E~~~~~~~---~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~ 266 (364)
+.+|...+.+.+.++ ...|++++++|||.+.++..... . . ......+..+|++++++.++.
T Consensus 154 ~~sk~a~~~~~~~~~~~~~~~gi~v~~v~pg~~~t~~~~~~-------~--~-------~~~~~~~~~~d~a~~~~~~l~ 217 (237)
T PRK07326 154 NASKFGLVGFSEAAMLDLRQYGIKVSTIMPGSVATHFNGHT-------P--S-------EKDAWKIQPEDIAQLVLDLLK 217 (237)
T ss_pred HHHHHHHHHHHHHHHHHhcccCcEEEEEeeccccCcccccc-------c--c-------hhhhccCCHHHHHHHHHHHHh
Confidence 999999998888765 33589999999998866431110 0 0 000112789999999999998
Q ss_pred CCCC--CceEEEeCCCCC
Q 017914 267 KPSA--WNVYNVVDDDPA 282 (364)
Q Consensus 267 ~~~~--g~~~~i~~~~~~ 282 (364)
.+.. .....+..+++.
T Consensus 218 ~~~~~~~~~~~~~~~~~~ 235 (237)
T PRK07326 218 MPPRTLPSKIEVRPSRPP 235 (237)
T ss_pred CCccccccceEEecCCCC
Confidence 8743 456666655543
|
|
| >PRK08213 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.66 E-value=8.6e-15 Score=128.51 Aligned_cols=208 Identities=12% Similarity=-0.018 Sum_probs=133.7
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhh----h--CCceEEEccCChhhH--Hhh-------cc
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELE----Q--SGFDVHLFNANETAL--MIL-------TT 120 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~----~--~~~~~~~~D~~~~~~--~~~-------~~ 120 (364)
..+++||||| +|+||+++++.|+++|++|++++|+.++.+.+. . ..+.++.+|++|++. ..+ ..
T Consensus 10 ~~~k~ilItGa~g~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~Dl~d~~~i~~~~~~~~~~~~~ 89 (259)
T PRK08213 10 LSGKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLEALGIDALWIAADVADEADIERLAEETLERFGH 89 (259)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 4468999999 999999999999999999999999876544332 1 246789999999663 211 35
Q ss_pred CceeeEEEEecCCCCCCCChhh----------hHHHHHHHHhh-----cCCccEEEEEccceeecCCCCccccCCCCCCC
Q 017914 121 LKNYTHLLVSIPPLEGTGDPML----------KHGELLRSTLM-----NGHLQWLGYLSSTGVYGHSGGAWVDEDYPANP 185 (364)
Q Consensus 121 ~d~v~~~~~~~~~~~~~~~~~~----------~~~~~l~~a~~-----~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~ 185 (364)
+|.|+|+++..........+.. ....++..++. ..+.++||++||...+...... ..+
T Consensus 90 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~l~~~~~~~~v~~sS~~~~~~~~~~-------~~~ 162 (259)
T PRK08213 90 VDILVNNAGATWGAPAEDHPVEAWDKVMNLNVRGLFLLSQAVAKRSMIPRGYGRIINVASVAGLGGNPPE-------VMD 162 (259)
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHHhcCCeEEEEECChhhccCCCcc-------ccC
Confidence 7999999875432221111111 11223444332 2356799999986544221110 123
Q ss_pred CChhHHHHHHHHHHHHHhhhh---cCCcEEEEEecceecCCC-ChHHHHHHhcCcccccccccCCcccccccHHHHHHHH
Q 017914 186 TTELGRLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGR-SSVDTIIKQLPLSEGQKMRRARQYTSRIHVDDICQVL 261 (364)
Q Consensus 186 ~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~ 261 (364)
...|+.+|...|.+++.++++ .++++++++||.+-.+.. ..+..+.... .... ...-+...+|+|+++
T Consensus 163 ~~~Y~~sKa~~~~~~~~~a~~~~~~gi~v~~v~Pg~~~t~~~~~~~~~~~~~~--~~~~------~~~~~~~~~~va~~~ 234 (259)
T PRK08213 163 TIAYNTSKGAVINFTRALAAEWGPHGIRVNAIAPGFFPTKMTRGTLERLGEDL--LAHT------PLGRLGDDEDLKGAA 234 (259)
T ss_pred cchHHHHHHHHHHHHHHHHHHhcccCEEEEEEecCcCCCcchhhhhHHHHHHH--HhcC------CCCCCcCHHHHHHHH
Confidence 468999999999999988764 379999999998866532 2222222210 0000 011224589999999
Q ss_pred HHHccCCC---CCceEEEeCC
Q 017914 262 SASIDKPS---AWNVYNVVDD 279 (364)
Q Consensus 262 ~~~l~~~~---~g~~~~i~~~ 279 (364)
..++.... .|+.+++.++
T Consensus 235 ~~l~~~~~~~~~G~~~~~~~~ 255 (259)
T PRK08213 235 LLLASDASKHITGQILAVDGG 255 (259)
T ss_pred HHHhCccccCccCCEEEECCC
Confidence 88886542 3788887665
|
|
| >PRK07109 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.66 E-value=9.5e-15 Score=132.66 Aligned_cols=199 Identities=9% Similarity=-0.048 Sum_probs=129.5
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhh----h--CCceEEEccCChhhH--Hh-------hcc
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELE----Q--SGFDVHLFNANETAL--MI-------LTT 120 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~----~--~~~~~~~~D~~~~~~--~~-------~~~ 120 (364)
..+++|+||| +|+||++++++|+++|++|++++|+.+..+.+. . ..+.++.+|++|.+. .. +..
T Consensus 6 l~~k~vlITGas~gIG~~la~~la~~G~~Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d~~~v~~~~~~~~~~~g~ 85 (334)
T PRK07109 6 IGRQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRAAGGEALAVVADVADAEAVQAAADRAEEELGP 85 (334)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHCCC
Confidence 4457899999 999999999999999999999999876654332 1 246788999999764 22 235
Q ss_pred CceeeEEEEecCCCCCCCChhh----h----------HHHHHHHHhhcCCccEEEEEccceeecCCCCccccCCCCCCCC
Q 017914 121 LKNYTHLLVSIPPLEGTGDPML----K----------HGELLRSTLMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANPT 186 (364)
Q Consensus 121 ~d~v~~~~~~~~~~~~~~~~~~----~----------~~~~l~~a~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~ 186 (364)
+|.++|+++............. . ....++..++..+..++|++||...+.... ..
T Consensus 86 iD~lInnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~~~~g~iV~isS~~~~~~~~-----------~~ 154 (334)
T PRK07109 86 IDTWVNNAMVTVFGPFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRPRDRGAIIQVGSALAYRSIP-----------LQ 154 (334)
T ss_pred CCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEeCChhhccCCC-----------cc
Confidence 8999998875322111111111 1 112334444455567899999987664321 23
Q ss_pred ChhHHHHHHHHHHHHHhhhh-----cCCcEEEEEecceecCCCChHHHHHHhcCcccccccccCCcccccccHHHHHHHH
Q 017914 187 TELGRLRLSAEKGWLNLGRD-----LGISAQVFRLGGIYGPGRSSVDTIIKQLPLSEGQKMRRARQYTSRIHVDDICQVL 261 (364)
Q Consensus 187 ~~Y~~sK~~~E~~~~~~~~~-----~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~ 261 (364)
..|+.+|...+.+.+.++.+ .++++++|+||.+..+... ..... .... ......+...+|+|+++
T Consensus 155 ~~Y~asK~a~~~~~~~l~~el~~~~~~I~v~~v~Pg~v~T~~~~---~~~~~--~~~~-----~~~~~~~~~pe~vA~~i 224 (334)
T PRK07109 155 SAYCAAKHAIRGFTDSLRCELLHDGSPVSVTMVQPPAVNTPQFD---WARSR--LPVE-----PQPVPPIYQPEVVADAI 224 (334)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCccCchhh---hhhhh--cccc-----ccCCCCCCCHHHHHHHH
Confidence 67999999999888776533 3699999999988655311 11110 0000 01112347899999999
Q ss_pred HHHccCCCCCceEEEeC
Q 017914 262 SASIDKPSAWNVYNVVD 278 (364)
Q Consensus 262 ~~~l~~~~~g~~~~i~~ 278 (364)
+.++.++ .+.+.+++
T Consensus 225 ~~~~~~~--~~~~~vg~ 239 (334)
T PRK07109 225 LYAAEHP--RRELWVGG 239 (334)
T ss_pred HHHHhCC--CcEEEeCc
Confidence 9999876 33455543
|
|
| >PRK08339 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.66 E-value=1e-14 Score=128.26 Aligned_cols=213 Identities=12% Similarity=-0.044 Sum_probs=133.9
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhh-------hCCceEEEccCChhhH--Hhh------cc
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELE-------QSGFDVHLFNANETAL--MIL------TT 120 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~-------~~~~~~~~~D~~~~~~--~~~------~~ 120 (364)
..++++|||| +|.||++++++|+++|++|++++|+.++...+. ..++.++.+|++|.+. ..+ ..
T Consensus 6 l~~k~~lItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~g~ 85 (263)
T PRK08339 6 LSGKLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKSESNVDVSYIVADLTKREDLERTVKELKNIGE 85 (263)
T ss_pred CCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHHHhhCC
Confidence 3467899999 899999999999999999999999876544322 1357789999999763 222 24
Q ss_pred CceeeEEEEecCCCCCCCChhhh----H----------HHHHHHHhhcCCccEEEEEccceeecCCCCccccCCCCCCCC
Q 017914 121 LKNYTHLLVSIPPLEGTGDPMLK----H----------GELLRSTLMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANPT 186 (364)
Q Consensus 121 ~d~v~~~~~~~~~~~~~~~~~~~----~----------~~~l~~a~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~ 186 (364)
+|.++|+++.............+ . .+.++..+++.+..++|++||...+.... ..
T Consensus 86 iD~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~~~g~Ii~isS~~~~~~~~-----------~~ 154 (263)
T PRK08339 86 PDIFFFSTGGPKPGYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAMERKGFGRIIYSTSVAIKEPIP-----------NI 154 (263)
T ss_pred CcEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcCccccCCCC-----------cc
Confidence 78888887653321111111111 1 12334444455567999999976442111 23
Q ss_pred ChhHHHHHHHHHHHHHhhhh---cCCcEEEEEecceecCCCChHHHHHHh----cCcc--c-ccccccCCcccccccHHH
Q 017914 187 TELGRLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRSSVDTIIKQ----LPLS--E-GQKMRRARQYTSRIHVDD 256 (364)
Q Consensus 187 ~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~----~~~~--~-~~~~~~~~~~~~~i~v~D 256 (364)
..|+.+|...+.+.+.++.+ .|++++.|.||.+..+. ...+... .... . ...........-+...+|
T Consensus 155 ~~y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~d 231 (263)
T PRK08339 155 ALSNVVRISMAGLVRTLAKELGPKGITVNGIMPGIIRTDR---VIQLAQDRAKREGKSVEEALQEYAKPIPLGRLGEPEE 231 (263)
T ss_pred hhhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCccHH---HHHHHHhhhhccCCCHHHHHHHHhccCCcccCcCHHH
Confidence 56999999999999888754 47999999999886542 1111000 0000 0 000000001122467899
Q ss_pred HHHHHHHHccCCC---CCceEEEeCCCCCC
Q 017914 257 ICQVLSASIDKPS---AWNVYNVVDDDPAP 283 (364)
Q Consensus 257 va~~~~~~l~~~~---~g~~~~i~~~~~~s 283 (364)
+|++++.++.... .|+++.+.+|...+
T Consensus 232 va~~v~fL~s~~~~~itG~~~~vdgG~~~~ 261 (263)
T PRK08339 232 IGYLVAFLASDLGSYINGAMIPVDGGRLNS 261 (263)
T ss_pred HHHHHHHHhcchhcCccCceEEECCCcccc
Confidence 9999999887542 37888887765444
|
|
| >PRK09730 putative NAD(P)-binding oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.66 E-value=9.1e-15 Score=127.37 Aligned_cols=203 Identities=13% Similarity=0.063 Sum_probs=124.7
Q ss_pred CCeEEEEc-CChhhHHHHHHHHhCCCEEEEE-EeCchhhhhh----hh--CCceEEEccCChhhH--Hhh-------ccC
Q 017914 59 PNRMLILG-MGFVGRIFAEKIKNQGWVVSGT-CTNVMKKKEL----EQ--SGFDVHLFNANETAL--MIL-------TTL 121 (364)
Q Consensus 59 ~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~-~r~~~~~~~l----~~--~~~~~~~~D~~~~~~--~~~-------~~~ 121 (364)
|++||||| +|+||++++++|+++|++|+++ .|+.++.... .. .++.++.+|++|.+. ..+ ..+
T Consensus 1 ~~~~lItGa~g~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~~i 80 (247)
T PRK09730 1 MAIALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLITQAGGKAFVLQADISDENQVVAMFTAIDQHDEPL 80 (247)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhCCCeEEEEEccCCCHHHHHHHHHHHHHhCCCC
Confidence 36899999 9999999999999999999875 4655443222 11 246789999999763 222 356
Q ss_pred ceeeEEEEecCCCCCCCCh-----hhhHHHHHHHH----------hhc---CCccEEEEEccceeecCCCCccccCCCCC
Q 017914 122 KNYTHLLVSIPPLEGTGDP-----MLKHGELLRST----------LMN---GHLQWLGYLSSTGVYGHSGGAWVDEDYPA 183 (364)
Q Consensus 122 d~v~~~~~~~~~~~~~~~~-----~~~~~~~l~~a----------~~~---~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~ 183 (364)
|.|+|+++.........+. ......|+... +.. ...++||++||...+.....
T Consensus 81 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~~v~~sS~~~~~~~~~--------- 151 (247)
T PRK09730 81 AALVNNAGILFTQCTVENLTAERINRVLSTNVTGYFLCCREAVKRMALKHGGSGGAIVNVSSAASRLGAPG--------- 151 (247)
T ss_pred CEEEECCCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhccCCCC---------
Confidence 8999998754332211111 11222233322 111 12357999998754321110
Q ss_pred CCCChhHHHHHHHHHHHHHhhhh---cCCcEEEEEecceecCCCCh--HHHHHHhcCcccccccccCCcccccccHHHHH
Q 017914 184 NPTTELGRLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRSS--VDTIIKQLPLSEGQKMRRARQYTSRIHVDDIC 258 (364)
Q Consensus 184 ~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva 258 (364)
....|+.+|...|.+++.++.+ .+++++++|||.++++.... ........ ....+. .-..+.+|+|
T Consensus 152 -~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~i~pg~~~~~~~~~~~~~~~~~~~--~~~~~~------~~~~~~~dva 222 (247)
T PRK09730 152 -EYVDYAASKGAIDTLTTGLSLEVAAQGIRVNCVRPGFIYTEMHASGGEPGRVDRV--KSNIPM------QRGGQPEEVA 222 (247)
T ss_pred -cccchHhHHHHHHHHHHHHHHHHHHhCeEEEEEEeCCCcCcccccCCCHHHHHHH--HhcCCC------CCCcCHHHHH
Confidence 1135999999999998877643 48999999999999975321 11111100 000000 0113689999
Q ss_pred HHHHHHccCC---CCCceEEEeCC
Q 017914 259 QVLSASIDKP---SAWNVYNVVDD 279 (364)
Q Consensus 259 ~~~~~~l~~~---~~g~~~~i~~~ 279 (364)
++++.++... ..|+.|++.++
T Consensus 223 ~~~~~~~~~~~~~~~g~~~~~~g~ 246 (247)
T PRK09730 223 QAIVWLLSDKASYVTGSFIDLAGG 246 (247)
T ss_pred HHHHhhcChhhcCccCcEEecCCC
Confidence 9999998765 33777777654
|
|
| >PRK07478 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.65 E-value=2e-14 Score=125.82 Aligned_cols=205 Identities=11% Similarity=-0.020 Sum_probs=132.7
Q ss_pred CCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhh------CCceEEEccCChhhH--Hhh-------ccC
Q 017914 58 SPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQ------SGFDVHLFNANETAL--MIL-------TTL 121 (364)
Q Consensus 58 ~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~------~~~~~~~~D~~~~~~--~~~-------~~~ 121 (364)
.++++|||| +|.||.+++++|.++|++|++++|+.++.+.+.. ..+.++.+|+++.+. ..+ ..+
T Consensus 5 ~~k~~lItGas~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 84 (254)
T PRK07478 5 NGKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAEGGEAVALAGDVRDEAYAKALVALAVERFGGL 84 (254)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhcCCC
Confidence 457999999 9999999999999999999999998766544321 246788899999763 222 367
Q ss_pred ceeeEEEEecCCCCCCC-----ChhhhHHHHH----------HHHhhcCCccEEEEEccceeecCCCCccccCCCCCCCC
Q 017914 122 KNYTHLLVSIPPLEGTG-----DPMLKHGELL----------RSTLMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANPT 186 (364)
Q Consensus 122 d~v~~~~~~~~~~~~~~-----~~~~~~~~~l----------~~a~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~ 186 (364)
|+++|+++......... +.......|+ +..+++.+..++|++||...+... ....
T Consensus 85 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~~~iv~~sS~~~~~~~----------~~~~ 154 (254)
T PRK07478 85 DIAFNNAGTLGEMGPVAEMSLEGWRETLATNLTSAFLGAKHQIPAMLARGGGSLIFTSTFVGHTAG----------FPGM 154 (254)
T ss_pred CEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEechHhhccC----------CCCc
Confidence 99999887643221111 1111222232 333444556789999986543211 1134
Q ss_pred ChhHHHHHHHHHHHHHhhhhc---CCcEEEEEecceecCCCChH---HHHHHhcCcccccccccCCcccccccHHHHHHH
Q 017914 187 TELGRLRLSAEKGWLNLGRDL---GISAQVFRLGGIYGPGRSSV---DTIIKQLPLSEGQKMRRARQYTSRIHVDDICQV 260 (364)
Q Consensus 187 ~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilRp~~v~g~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~ 260 (364)
..|+.+|.+.+.+++.++.+. |+.+++|+||.+-.+..... ...... +... .....+...+|+|++
T Consensus 155 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~--~~~~------~~~~~~~~~~~va~~ 226 (254)
T PRK07478 155 AAYAASKAGLIGLTQVLAAEYGAQGIRVNALLPGGTDTPMGRAMGDTPEALAF--VAGL------HALKRMAQPEEIAQA 226 (254)
T ss_pred chhHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeCcccCcccccccCCHHHHHH--HHhc------CCCCCCcCHHHHHHH
Confidence 679999999999999887653 79999999999865521110 000000 0000 011224678999999
Q ss_pred HHHHccCCC---CCceEEEeCCC
Q 017914 261 LSASIDKPS---AWNVYNVVDDD 280 (364)
Q Consensus 261 ~~~~l~~~~---~g~~~~i~~~~ 280 (364)
++.++.... .|+++.+.+|.
T Consensus 227 ~~~l~s~~~~~~~G~~~~~dgg~ 249 (254)
T PRK07478 227 ALFLASDAASFVTGTALLVDGGV 249 (254)
T ss_pred HHHHcCchhcCCCCCeEEeCCch
Confidence 999987643 37888776653
|
|
| >PRK06181 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.65 E-value=1.1e-14 Score=128.04 Aligned_cols=193 Identities=10% Similarity=-0.008 Sum_probs=125.1
Q ss_pred CCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhh------hCCceEEEccCChhhH--Hhh-------ccCc
Q 017914 59 PNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELE------QSGFDVHLFNANETAL--MIL-------TTLK 122 (364)
Q Consensus 59 ~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~------~~~~~~~~~D~~~~~~--~~~-------~~~d 122 (364)
+++||||| +|+||++++++|+++|++|++++|+..+.+.+. ..++.++.+|++|.+. ..+ ..+|
T Consensus 1 ~~~vlVtGasg~iG~~la~~l~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 80 (263)
T PRK06181 1 GKVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELADHGGEALVVPTDVSDAEACERLIEAAVARFGGID 80 (263)
T ss_pred CCEEEEecCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence 36899999 999999999999999999999999876544321 1357788999999663 222 3689
Q ss_pred eeeEEEEecCCCCCCCC-hh----hhHH------HHHHHHhh---cCCccEEEEEccceeecCCCCccccCCCCCCCCCh
Q 017914 123 NYTHLLVSIPPLEGTGD-PM----LKHG------ELLRSTLM---NGHLQWLGYLSSTGVYGHSGGAWVDEDYPANPTTE 188 (364)
Q Consensus 123 ~v~~~~~~~~~~~~~~~-~~----~~~~------~~l~~a~~---~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~ 188 (364)
+|+|+++.......... .. .... .++..++. ..+.+++|++||...+... .+...
T Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~iv~~sS~~~~~~~-----------~~~~~ 149 (263)
T PRK06181 81 ILVNNAGITMWSRFDELTDLSVFERVMRVNYLGAVYCTHAALPHLKASRGQIVVVSSLAGLTGV-----------PTRSG 149 (263)
T ss_pred EEEECCCcccccchhccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCEEEEEecccccCCC-----------CCccH
Confidence 99999875433211111 01 1111 22333332 1234689999987655322 13468
Q ss_pred hHHHHHHHHHHHHHhhh---hcCCcEEEEEecceecCCCChHHHHHHhcCcccccccccCCcccccccHHHHHHHHHHHc
Q 017914 189 LGRLRLSAEKGWLNLGR---DLGISAQVFRLGGIYGPGRSSVDTIIKQLPLSEGQKMRRARQYTSRIHVDDICQVLSASI 265 (364)
Q Consensus 189 Y~~sK~~~E~~~~~~~~---~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l 265 (364)
|+.+|...|.+.+.++. ..++++++++||.+..+.... ......... ...+.+...+++++|+|++++.++
T Consensus 150 Y~~sK~~~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~~---~~~~~~~~~---~~~~~~~~~~~~~~dva~~i~~~~ 223 (263)
T PRK06181 150 YAASKHALHGFFDSLRIELADDGVAVTVVCPGFVATDIRKR---ALDGDGKPL---GKSPMQESKIMSAEECAEAILPAI 223 (263)
T ss_pred HHHHHHHHHHHHHHHHHHhhhcCceEEEEecCccccCcchh---hcccccccc---ccccccccCCCCHHHHHHHHHHHh
Confidence 99999999999877653 358999999999987653211 111000000 011122246799999999999999
Q ss_pred cCC
Q 017914 266 DKP 268 (364)
Q Consensus 266 ~~~ 268 (364)
+..
T Consensus 224 ~~~ 226 (263)
T PRK06181 224 ARR 226 (263)
T ss_pred hCC
Confidence 853
|
|
| >TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase | Back alignment and domain information |
|---|
Probab=99.65 E-value=9.4e-15 Score=126.59 Aligned_cols=198 Identities=13% Similarity=0.023 Sum_probs=126.2
Q ss_pred EEEEc-CChhhHHHHHHHHhCCCEEEEEEeCc-hhhhh----hhhC--CceEEEccCChhhH--Hhh-------ccCcee
Q 017914 62 MLILG-MGFVGRIFAEKIKNQGWVVSGTCTNV-MKKKE----LEQS--GFDVHLFNANETAL--MIL-------TTLKNY 124 (364)
Q Consensus 62 vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~-~~~~~----l~~~--~~~~~~~D~~~~~~--~~~-------~~~d~v 124 (364)
||||| +|+||++++++|+++|++|++++|+. +.... +... .+.++.+|++|.+. ..+ ..+|+|
T Consensus 1 vlItG~~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v 80 (239)
T TIGR01830 1 ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEELKAYGVKALGVVCDVSDREDVKAVVEEIEEELGPIDIL 80 (239)
T ss_pred CEEECCCcHHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCEE
Confidence 58999 99999999999999999999999875 22211 2222 36789999999763 222 347999
Q ss_pred eEEEEecCCCCCC----CChhhhHH------HHHHHHhh----cCCccEEEEEccce-eecCCCCccccCCCCCCCCChh
Q 017914 125 THLLVSIPPLEGT----GDPMLKHG------ELLRSTLM----NGHLQWLGYLSSTG-VYGHSGGAWVDEDYPANPTTEL 189 (364)
Q Consensus 125 ~~~~~~~~~~~~~----~~~~~~~~------~~l~~a~~----~~~~~r~v~~Ss~~-vy~~~~~~~~~E~~~~~~~~~Y 189 (364)
+|+++........ .+...... .++..++. ..+.++||++||.. +|+.. ....|
T Consensus 81 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~g~~------------~~~~y 148 (239)
T TIGR01830 81 VNNAGITRDNLLMRMKEEDWDAVIDTNLTGVFNLTQAVLRIMIKQRSGRIINISSVVGLMGNA------------GQANY 148 (239)
T ss_pred EECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEECCccccCCCC------------CCchh
Confidence 9999864332111 11111111 22333332 34567999999864 44421 23579
Q ss_pred HHHHHHHHHHHHHhhhh---cCCcEEEEEecceecCCCChHHH-HHHhcCcccccccccCCcccccccHHHHHHHHHHHc
Q 017914 190 GRLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRSSVDT-IIKQLPLSEGQKMRRARQYTSRIHVDDICQVLSASI 265 (364)
Q Consensus 190 ~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l 265 (364)
+.+|...+.+++.++++ .|+.++++|||.+.++....+.. ..... ... ....-+.+++|+|++++.++
T Consensus 149 ~~~k~a~~~~~~~l~~~~~~~g~~~~~i~pg~~~~~~~~~~~~~~~~~~-~~~-------~~~~~~~~~~~~a~~~~~~~ 220 (239)
T TIGR01830 149 AASKAGVIGFTKSLAKELASRNITVNAVAPGFIDTDMTDKLSEKVKKKI-LSQ-------IPLGRFGTPEEVANAVAFLA 220 (239)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCeEEEEEEECCCCChhhhhcChHHHHHH-Hhc-------CCcCCCcCHHHHHHHHHHHh
Confidence 99999999988887654 48999999999886543221111 11000 000 01122468999999999888
Q ss_pred cCC---CCCceEEEeCC
Q 017914 266 DKP---SAWNVYNVVDD 279 (364)
Q Consensus 266 ~~~---~~g~~~~i~~~ 279 (364)
... ..|++||+.++
T Consensus 221 ~~~~~~~~g~~~~~~~g 237 (239)
T TIGR01830 221 SDEASYITGQVIHVDGG 237 (239)
T ss_pred CcccCCcCCCEEEeCCC
Confidence 553 24789998665
|
This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis. |
| >PRK08277 D-mannonate oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.65 E-value=5.6e-15 Score=131.08 Aligned_cols=209 Identities=12% Similarity=0.010 Sum_probs=132.6
Q ss_pred CCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhh----h--CCceEEEccCChhhH--Hh-------hccC
Q 017914 58 SPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELE----Q--SGFDVHLFNANETAL--MI-------LTTL 121 (364)
Q Consensus 58 ~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~----~--~~~~~~~~D~~~~~~--~~-------~~~~ 121 (364)
.+++++||| +|+||++++++|+++|++|++++|+.+....+. . .++.++.+|++|.+. .. +..+
T Consensus 9 ~~k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i 88 (278)
T PRK08277 9 KGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAAGGEALAVKADVLDKESLEQARQQILEDFGPC 88 (278)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 457999999 999999999999999999999999866544332 1 246788999998653 22 2368
Q ss_pred ceeeEEEEecCCCCC--------------CCC-----hhhhHHHHH----------HHHhhcCCccEEEEEccceeecCC
Q 017914 122 KNYTHLLVSIPPLEG--------------TGD-----PMLKHGELL----------RSTLMNGHLQWLGYLSSTGVYGHS 172 (364)
Q Consensus 122 d~v~~~~~~~~~~~~--------------~~~-----~~~~~~~~l----------~~a~~~~~~~r~v~~Ss~~vy~~~ 172 (364)
|+++|+++....... ..+ .......|+ +..+...+..++|++||...+...
T Consensus 89 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~ 168 (278)
T PRK08277 89 DILINGAGGNHPKATTDNEFHELIEPTKTFFDLDEEGFEFVFDLNLLGTLLPTQVFAKDMVGRKGGNIINISSMNAFTPL 168 (278)
T ss_pred CEEEECCCCCCcccccccccccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEccchhcCCC
Confidence 999999874322110 000 011111222 223334445789999997665322
Q ss_pred CCccccCCCCCCCCChhHHHHHHHHHHHHHhhhhc---CCcEEEEEecceecCCCChHHHHHHhc-Ccc-cccccccCCc
Q 017914 173 GGAWVDEDYPANPTTELGRLRLSAEKGWLNLGRDL---GISAQVFRLGGIYGPGRSSVDTIIKQL-PLS-EGQKMRRARQ 247 (364)
Q Consensus 173 ~~~~~~E~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilRp~~v~g~~~~~~~~~~~~~-~~~-~~~~~~~~~~ 247 (364)
.....|+.+|.+.+.+++.++.+. ++++++|+||.+..+....+ +.... ... ..........
T Consensus 169 -----------~~~~~Y~~sK~a~~~l~~~la~e~~~~girvn~v~Pg~v~t~~~~~~--~~~~~~~~~~~~~~~~~~~p 235 (278)
T PRK08277 169 -----------TKVPAYSAAKAAISNFTQWLAVHFAKVGIRVNAIAPGFFLTEQNRAL--LFNEDGSLTERANKILAHTP 235 (278)
T ss_pred -----------CCCchhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeccCcCcchhhh--hccccccchhHHHHHhccCC
Confidence 234579999999999998887654 79999999999987642110 00000 000 0000000011
Q ss_pred ccccccHHHHHHHHHHHccC-CC---CCceEEEeCC
Q 017914 248 YTSRIHVDDICQVLSASIDK-PS---AWNVYNVVDD 279 (364)
Q Consensus 248 ~~~~i~v~Dva~~~~~~l~~-~~---~g~~~~i~~~ 279 (364)
..-+...+|+|++++.++.. .. .|+.+.+.+|
T Consensus 236 ~~r~~~~~dva~~~~~l~s~~~~~~~tG~~i~vdgG 271 (278)
T PRK08277 236 MGRFGKPEELLGTLLWLADEKASSFVTGVVLPVDGG 271 (278)
T ss_pred ccCCCCHHHHHHHHHHHcCccccCCcCCCEEEECCC
Confidence 12346789999999998876 32 3788887666
|
|
| >PRK08643 acetoin reductase; Validated | Back alignment and domain information |
|---|
Probab=99.65 E-value=2.3e-14 Score=125.60 Aligned_cols=211 Identities=10% Similarity=-0.023 Sum_probs=129.0
Q ss_pred CCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhh------CCceEEEccCChhhH--Hhh-------ccCc
Q 017914 59 PNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQ------SGFDVHLFNANETAL--MIL-------TTLK 122 (364)
Q Consensus 59 ~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~------~~~~~~~~D~~~~~~--~~~-------~~~d 122 (364)
++++|||| +|+||++++++|+++|++|++++|+.++...+.. .++.++.+|+++++. ..+ ..+|
T Consensus 2 ~k~~lItGas~giG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 81 (256)
T PRK08643 2 SKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSDRDQVFAAVRQVVDTFGDLN 81 (256)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence 57899999 9999999999999999999999998765433221 356788999999763 222 3589
Q ss_pred eeeEEEEecCCCCCCC----ChhhhHHHHHHH----------HhhcC-CccEEEEEccceeecCCCCccccCCCCCCCCC
Q 017914 123 NYTHLLVSIPPLEGTG----DPMLKHGELLRS----------TLMNG-HLQWLGYLSSTGVYGHSGGAWVDEDYPANPTT 187 (364)
Q Consensus 123 ~v~~~~~~~~~~~~~~----~~~~~~~~~l~~----------a~~~~-~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~ 187 (364)
.++|+++......... +.......|+.. .++.. ...++|++||...+... ....
T Consensus 82 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~-----------~~~~ 150 (256)
T PRK08643 82 VVVNNAGVAPTTPIETITEEQFDKVYNINVGGVIWGIQAAQEAFKKLGHGGKIINATSQAGVVGN-----------PELA 150 (256)
T ss_pred EEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECccccccCC-----------CCCc
Confidence 9999987543221111 111112223322 22222 23589999886533211 1235
Q ss_pred hhHHHHHHHHHHHHHhhh---hcCCcEEEEEecceecCCCChH-HHHHHh--cCccc-ccccccCCcccccccHHHHHHH
Q 017914 188 ELGRLRLSAEKGWLNLGR---DLGISAQVFRLGGIYGPGRSSV-DTIIKQ--LPLSE-GQKMRRARQYTSRIHVDDICQV 260 (364)
Q Consensus 188 ~Y~~sK~~~E~~~~~~~~---~~~~~~~ilRp~~v~g~~~~~~-~~~~~~--~~~~~-~~~~~~~~~~~~~i~v~Dva~~ 260 (364)
.|+.+|...+.+++.++. ..|++++.++||.+.++..... ...... ..... ............+...+|+|.+
T Consensus 151 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~ 230 (256)
T PRK08643 151 VYSSTKFAVRGLTQTAARDLASEGITVNAYAPGIVKTPMMFDIAHQVGENAGKPDEWGMEQFAKDITLGRLSEPEDVANC 230 (256)
T ss_pred hhHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCCCcChhhhHHHhhhccccCCCchHHHHHHhccCCCCCCcCHHHHHHH
Confidence 799999999998888765 3589999999998876531110 000000 00000 0000000011224678999999
Q ss_pred HHHHccCCC---CCceEEEeCCC
Q 017914 261 LSASIDKPS---AWNVYNVVDDD 280 (364)
Q Consensus 261 ~~~~l~~~~---~g~~~~i~~~~ 280 (364)
+..++.... .|+++.+.+|.
T Consensus 231 ~~~L~~~~~~~~~G~~i~vdgg~ 253 (256)
T PRK08643 231 VSFLAGPDSDYITGQTIIVDGGM 253 (256)
T ss_pred HHHHhCccccCccCcEEEeCCCe
Confidence 999987542 37788876654
|
|
| >PRK05650 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.65 E-value=4.7e-15 Score=130.99 Aligned_cols=193 Identities=11% Similarity=-0.022 Sum_probs=124.9
Q ss_pred CeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhh------hCCceEEEccCChhhH--Hhh-------ccCce
Q 017914 60 NRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELE------QSGFDVHLFNANETAL--MIL-------TTLKN 123 (364)
Q Consensus 60 ~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~------~~~~~~~~~D~~~~~~--~~~-------~~~d~ 123 (364)
|+||||| +|+||++++++|+++|++|++.+|+.++.+.+. ...+.++.+|++|.+. ..+ ..+|.
T Consensus 1 ~~vlVtGasggIG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id~ 80 (270)
T PRK05650 1 NRVMITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLREAGGDGFYQRCDVRDYSQLTALAQACEEKWGGIDV 80 (270)
T ss_pred CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 5799999 999999999999999999999999876544321 1356788999998653 222 36899
Q ss_pred eeEEEEecCCCCCCCChhh----hHH----------HHHHHHhhcCCccEEEEEccceeecCCCCccccCCCCCCCCChh
Q 017914 124 YTHLLVSIPPLEGTGDPML----KHG----------ELLRSTLMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANPTTEL 189 (364)
Q Consensus 124 v~~~~~~~~~~~~~~~~~~----~~~----------~~l~~a~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y 189 (364)
++|+++............. ... ..++..++..+..++|++||...+... .....|
T Consensus 81 lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~-----------~~~~~Y 149 (270)
T PRK05650 81 IVNNAGVASGGFFEELSLEDWDWQIAINLMGVVKGCKAFLPLFKRQKSGRIVNIASMAGLMQG-----------PAMSSY 149 (270)
T ss_pred EEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEECChhhcCCC-----------CCchHH
Confidence 9999876443221111111 111 223333445667799999987654321 234689
Q ss_pred HHHHHHHHHHHHHhhhh---cCCcEEEEEecceecCCCChHHHHHHhcCcccccccccCCcccccccHHHHHHHHHHHcc
Q 017914 190 GRLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRSSVDTIIKQLPLSEGQKMRRARQYTSRIHVDDICQVLSASID 266 (364)
Q Consensus 190 ~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~ 266 (364)
+.+|...+.+.+.++.+ .|+++++++||.+..+....+. ...+. .... ........+++++|+|+.++.+++
T Consensus 150 ~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~---~~~~~-~~~~-~~~~~~~~~~~~~~vA~~i~~~l~ 224 (270)
T PRK05650 150 NVAKAGVVALSETLLVELADDEIGVHVVCPSFFQTNLLDSFR---GPNPA-MKAQ-VGKLLEKSPITAADIADYIYQQVA 224 (270)
T ss_pred HHHHHHHHHHHHHHHHHhcccCcEEEEEecCccccCcccccc---cCchh-HHHH-HHHHhhcCCCCHHHHHHHHHHHHh
Confidence 99999988888777654 4899999999998765422110 00000 0000 000001234889999999999998
Q ss_pred CC
Q 017914 267 KP 268 (364)
Q Consensus 267 ~~ 268 (364)
+.
T Consensus 225 ~~ 226 (270)
T PRK05650 225 KG 226 (270)
T ss_pred CC
Confidence 64
|
|
| >PRK05693 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.65 E-value=1e-14 Score=129.15 Aligned_cols=207 Identities=14% Similarity=0.056 Sum_probs=128.3
Q ss_pred CCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCChhhH--Hhh-------ccCceeeEEE
Q 017914 59 PNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETAL--MIL-------TTLKNYTHLL 128 (364)
Q Consensus 59 ~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~--~~~-------~~~d~v~~~~ 128 (364)
||+||||| +|+||++++++|+++|++|++++|+.++...+...++.++.+|+++.+. ..+ ..+|.++|++
T Consensus 1 mk~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~a 80 (274)
T PRK05693 1 MPVVLITGCSSGIGRALADAFKAAGYEVWATARKAEDVEALAAAGFTAVQLDVNDGAALARLAEELEAEHGGLDVLINNA 80 (274)
T ss_pred CCEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHCCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEECC
Confidence 47899999 9999999999999999999999998877666655678889999999653 222 3689999999
Q ss_pred EecCCCCCCCCh----hhhHHHH------HHHHhh---cCCccEEEEEccceeecCCCCccccCCCCCCCCChhHHHHHH
Q 017914 129 VSIPPLEGTGDP----MLKHGEL------LRSTLM---NGHLQWLGYLSSTGVYGHSGGAWVDEDYPANPTTELGRLRLS 195 (364)
Q Consensus 129 ~~~~~~~~~~~~----~~~~~~~------l~~a~~---~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~~sK~~ 195 (364)
+........... ......| +..++. ..+..++|++||...+... .....|+.+|..
T Consensus 81 g~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~~~~Y~~sK~a 149 (274)
T PRK05693 81 GYGAMGPLLDGGVEAMRRQFETNVFAVVGVTRALFPLLRRSRGLVVNIGSVSGVLVT-----------PFAGAYCASKAA 149 (274)
T ss_pred CCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCEEEEECCccccCCC-----------CCccHHHHHHHH
Confidence 754322111111 1111222 222221 1234689999885432111 123679999999
Q ss_pred HHHHHHHhhhh---cCCcEEEEEecceecCCCChHHHHHHhcCccccccc-ccC--------CcccccccHHHHHHHHHH
Q 017914 196 AEKGWLNLGRD---LGISAQVFRLGGIYGPGRSSVDTIIKQLPLSEGQKM-RRA--------RQYTSRIHVDDICQVLSA 263 (364)
Q Consensus 196 ~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~-~~~--------~~~~~~i~v~Dva~~~~~ 263 (364)
.+.+.+.++.+ .|+++++++||.+..+........... ........ ... ...-.....+|+|+.++.
T Consensus 150 l~~~~~~l~~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~ 228 (274)
T PRK05693 150 VHALSDALRLELAPFGVQVMEVQPGAIASQFASNASREAEQ-LLAEQSPWWPLREHIQARARASQDNPTPAAEFARQLLA 228 (274)
T ss_pred HHHHHHHHHHHhhhhCeEEEEEecCccccccccccccchhh-cCCCCCccHHHHHHHHHHHHhccCCCCCHHHHHHHHHH
Confidence 99988877643 589999999999865431110000000 00000000 000 000112578999999999
Q ss_pred HccCCCCCceEEEe
Q 017914 264 SIDKPSAWNVYNVV 277 (364)
Q Consensus 264 ~l~~~~~g~~~~i~ 277 (364)
+++++.....|.++
T Consensus 229 ~~~~~~~~~~~~~g 242 (274)
T PRK05693 229 AVQQSPRPRLVRLG 242 (274)
T ss_pred HHhCCCCCceEEec
Confidence 99876554355554
|
|
| >PRK06500 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.65 E-value=2.5e-14 Score=124.73 Aligned_cols=202 Identities=13% Similarity=-0.005 Sum_probs=127.7
Q ss_pred CCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhh---CCceEEEccCChhhH--H-------hhccCcee
Q 017914 58 SPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQ---SGFDVHLFNANETAL--M-------ILTTLKNY 124 (364)
Q Consensus 58 ~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~---~~~~~~~~D~~~~~~--~-------~~~~~d~v 124 (364)
.+++||||| +|+||++++++|+++|++|++++|+.+....+.+ ..+.++.+|++|.+. . .+..+|++
T Consensus 5 ~~k~vlItGasg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v 84 (249)
T PRK06500 5 QGKTALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAELGESALVIRADAGDVAAQKALAQALAEAFGRLDAV 84 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCEE
Confidence 457999999 9999999999999999999999998665443321 346788899998553 1 12367999
Q ss_pred eEEEEecCCCCCC----CChhhhHHH------HHHHHhhc--CCccEEEEEcc-ceeecCCCCccccCCCCCCCCChhHH
Q 017914 125 THLLVSIPPLEGT----GDPMLKHGE------LLRSTLMN--GHLQWLGYLSS-TGVYGHSGGAWVDEDYPANPTTELGR 191 (364)
Q Consensus 125 ~~~~~~~~~~~~~----~~~~~~~~~------~l~~a~~~--~~~~r~v~~Ss-~~vy~~~~~~~~~E~~~~~~~~~Y~~ 191 (364)
+|+++........ .+....... ++..++.. ....++|++|| .+.|+.. ....|+.
T Consensus 85 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~i~~~S~~~~~~~~------------~~~~Y~~ 152 (249)
T PRK06500 85 FINAGVAKFAPLEDWDEAMFDRSFNTNVKGPYFLIQALLPLLANPASIVLNGSINAHIGMP------------NSSVYAA 152 (249)
T ss_pred EECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEechHhccCCC------------CccHHHH
Confidence 9998754322111 111112222 33334331 12246777766 4444321 2368999
Q ss_pred HHHHHHHHHHHhhhh---cCCcEEEEEecceecCCCC-------hHHHHHHhcCcccccccccCCcccccccHHHHHHHH
Q 017914 192 LRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRS-------SVDTIIKQLPLSEGQKMRRARQYTSRIHVDDICQVL 261 (364)
Q Consensus 192 sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~ 261 (364)
+|...|.+++.++.+ .+++++++|||.++++... ....+.... ....+ ..-+...+|+|+++
T Consensus 153 sK~a~~~~~~~la~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~--~~~~~------~~~~~~~~~va~~~ 224 (249)
T PRK06500 153 SKAALLSLAKTLSGELLPRGIRVNAVSPGPVQTPLYGKLGLPEATLDAVAAQI--QALVP------LGRFGTPEEIAKAV 224 (249)
T ss_pred HHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCCCHHHHhhccCccchHHHHHHH--HhcCC------CCCCcCHHHHHHHH
Confidence 999999999887654 3899999999999876311 111111110 00000 11235789999999
Q ss_pred HHHccCCC---CCceEEEeCC
Q 017914 262 SASIDKPS---AWNVYNVVDD 279 (364)
Q Consensus 262 ~~~l~~~~---~g~~~~i~~~ 279 (364)
+.++.... .|..+.+.+|
T Consensus 225 ~~l~~~~~~~~~g~~i~~~gg 245 (249)
T PRK06500 225 LYLASDESAFIVGSEIIVDGG 245 (249)
T ss_pred HHHcCccccCccCCeEEECCC
Confidence 99887543 3667766655
|
|
| >PRK06124 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.65 E-value=3.5e-14 Score=124.40 Aligned_cols=205 Identities=9% Similarity=-0.033 Sum_probs=133.0
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhh----h--CCceEEEccCChhhH--Hhh-------cc
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELE----Q--SGFDVHLFNANETAL--MIL-------TT 120 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~----~--~~~~~~~~D~~~~~~--~~~-------~~ 120 (364)
..+++|+||| +|+||+++++.|+++|++|++++|+.+....+. . .++.++.+|+++.+. ..+ ..
T Consensus 9 ~~~k~ilItGas~~IG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 88 (256)
T PRK06124 9 LAGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAAGGAAEALAFDIADEEAVAAAFARIDAEHGR 88 (256)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcCC
Confidence 4578999999 999999999999999999999999876543321 1 347889999999663 222 34
Q ss_pred CceeeEEEEecCCCCCCCChhh----hHHH----------HHHHHhhcCCccEEEEEccceeecCCCCccccCCCCCCCC
Q 017914 121 LKNYTHLLVSIPPLEGTGDPML----KHGE----------LLRSTLMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANPT 186 (364)
Q Consensus 121 ~d~v~~~~~~~~~~~~~~~~~~----~~~~----------~l~~a~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~ 186 (364)
+|+++|+++............. .... .++..+...+.+++|++||...+.... ..
T Consensus 89 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~-----------~~ 157 (256)
T PRK06124 89 LDILVNNVGARDRRPLAELDDAAIRALLETDLVAPILLSRLAAQRMKRQGYGRIIAITSIAGQVARA-----------GD 157 (256)
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEeechhccCCC-----------Cc
Confidence 6899999875432111111111 1111 222333345667999999865332111 23
Q ss_pred ChhHHHHHHHHHHHHHhhhh---cCCcEEEEEecceecCCCChH---HHHHHhcCcccccccccCCcccccccHHHHHHH
Q 017914 187 TELGRLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRSSV---DTIIKQLPLSEGQKMRRARQYTSRIHVDDICQV 260 (364)
Q Consensus 187 ~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~ 260 (364)
..|+.+|.+.+.+++.++.+ .++++++|+||.+.++..... ..+... +.... ....+++.+|++++
T Consensus 158 ~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~--~~~~~------~~~~~~~~~~~a~~ 229 (256)
T PRK06124 158 AVYPAAKQGLTGLMRALAAEFGPHGITSNAIAPGYFATETNAAMAADPAVGPW--LAQRT------PLGRWGRPEEIAGA 229 (256)
T ss_pred cHhHHHHHHHHHHHHHHHHHHHHhCcEEEEEEECCccCcchhhhccChHHHHH--HHhcC------CCCCCCCHHHHHHH
Confidence 57999999999998887644 379999999999987642110 111110 00000 11235889999999
Q ss_pred HHHHccCCC---CCceEEEeCCC
Q 017914 261 LSASIDKPS---AWNVYNVVDDD 280 (364)
Q Consensus 261 ~~~~l~~~~---~g~~~~i~~~~ 280 (364)
++.++.... .|+.+.+.+|.
T Consensus 230 ~~~l~~~~~~~~~G~~i~~dgg~ 252 (256)
T PRK06124 230 AVFLASPAASYVNGHVLAVDGGY 252 (256)
T ss_pred HHHHcCcccCCcCCCEEEECCCc
Confidence 999998753 37777766553
|
|
| >PRK07856 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.64 E-value=2.6e-14 Score=124.99 Aligned_cols=206 Identities=10% Similarity=-0.035 Sum_probs=131.5
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCChhhH--Hhh-------ccCceeeE
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETAL--MIL-------TTLKNYTH 126 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~--~~~-------~~~d~v~~ 126 (364)
..++++|||| +|+||++++++|+++|++|++++|+.+.. ....++.++.+|+++.+. ..+ ..+|+++|
T Consensus 4 ~~~k~~lItGas~gIG~~la~~l~~~g~~v~~~~r~~~~~--~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~ 81 (252)
T PRK07856 4 LTGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRRAPET--VDGRPAEFHAADVRDPDQVAALVDAIVERHGRLDVLVN 81 (252)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCChhhh--hcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 3468999999 99999999999999999999999986541 122467889999999663 222 35699999
Q ss_pred EEEecCCCCCCCC----hhhhHHHH------HHHHhh----c-CCccEEEEEccceeecCCCCccccCCCCCCCCChhHH
Q 017914 127 LLVSIPPLEGTGD----PMLKHGEL------LRSTLM----N-GHLQWLGYLSSTGVYGHSGGAWVDEDYPANPTTELGR 191 (364)
Q Consensus 127 ~~~~~~~~~~~~~----~~~~~~~~------l~~a~~----~-~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~~ 191 (364)
+++.......... .......| +..++. . .+..++|++||...+... .....|+.
T Consensus 82 ~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~-----------~~~~~Y~~ 150 (252)
T PRK07856 82 NAGGSPYALAAEASPRFHEKIVELNLLAPLLVAQAANAVMQQQPGGGSIVNIGSVSGRRPS-----------PGTAAYGA 150 (252)
T ss_pred CCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcccccCCCC-----------CCCchhHH
Confidence 9875432211111 11111122 222221 2 234689999987543211 13467999
Q ss_pred HHHHHHHHHHHhhhhc--CCcEEEEEecceecCCCChH---HHHHHhcCcccccccccCCcccccccHHHHHHHHHHHcc
Q 017914 192 LRLSAEKGWLNLGRDL--GISAQVFRLGGIYGPGRSSV---DTIIKQLPLSEGQKMRRARQYTSRIHVDDICQVLSASID 266 (364)
Q Consensus 192 sK~~~E~~~~~~~~~~--~~~~~ilRp~~v~g~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~ 266 (364)
+|...|.+++.++.+. .+.++.++||.+..+..... ...... +... .....+...+|+|++++.++.
T Consensus 151 sK~a~~~l~~~la~e~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~--~~~~------~~~~~~~~p~~va~~~~~L~~ 222 (252)
T PRK07856 151 AKAGLLNLTRSLAVEWAPKVRVNAVVVGLVRTEQSELHYGDAEGIAA--VAAT------VPLGRLATPADIAWACLFLAS 222 (252)
T ss_pred HHHHHHHHHHHHHHHhcCCeEEEEEEeccccChHHhhhccCHHHHHH--Hhhc------CCCCCCcCHHHHHHHHHHHcC
Confidence 9999999999887653 38899999998866531110 000000 0000 011223678999999999987
Q ss_pred CCC---CCceEEEeCCCCCC
Q 017914 267 KPS---AWNVYNVVDDDPAP 283 (364)
Q Consensus 267 ~~~---~g~~~~i~~~~~~s 283 (364)
... .|+.+.+.+|...+
T Consensus 223 ~~~~~i~G~~i~vdgg~~~~ 242 (252)
T PRK07856 223 DLASYVSGANLEVHGGGERP 242 (252)
T ss_pred cccCCccCCEEEECCCcchH
Confidence 642 38888887775443
|
|
| >PRK07102 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.64 E-value=1.5e-14 Score=125.76 Aligned_cols=182 Identities=13% Similarity=0.093 Sum_probs=122.4
Q ss_pred CCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhh-------hCCceEEEccCChhhH--Hhh----ccCcee
Q 017914 59 PNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELE-------QSGFDVHLFNANETAL--MIL----TTLKNY 124 (364)
Q Consensus 59 ~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~-------~~~~~~~~~D~~~~~~--~~~----~~~d~v 124 (364)
||+|+||| +|+||.++++.|+++|++|++++|+.++.+.+. ..++.++.+|++|.+. ..+ ..+|.+
T Consensus 1 ~~~vlItGas~giG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~d~v 80 (243)
T PRK07102 1 MKKILIIGATSDIARACARRYAAAGARLYLAARDVERLERLADDLRARGAVAVSTHELDILDTASHAAFLDSLPALPDIV 80 (243)
T ss_pred CcEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEecCCCChHHHHHHHHHHhhcCCEE
Confidence 47899999 999999999999999999999999876654322 1357889999999663 222 346999
Q ss_pred eEEEEecCCCCCCCCh----hhhHHHH------HH----HHhhcCCccEEEEEccceeecCCCCccccCCCCCCCCChhH
Q 017914 125 THLLVSIPPLEGTGDP----MLKHGEL------LR----STLMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANPTTELG 190 (364)
Q Consensus 125 ~~~~~~~~~~~~~~~~----~~~~~~~------l~----~a~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~ 190 (364)
+|+++........... ......| +. ..+.+.+.+++|++||....... .....|+
T Consensus 81 v~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~-----------~~~~~Y~ 149 (243)
T PRK07102 81 LIAVGTLGDQAACEADPALALREFRTNFEGPIALLTLLANRFEARGSGTIVGISSVAGDRGR-----------ASNYVYG 149 (243)
T ss_pred EECCcCCCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCEEEEEecccccCCC-----------CCCcccH
Confidence 9988754432211111 1112222 22 22334566799999886422111 1235799
Q ss_pred HHHHHHHHHHHHhhh---hcCCcEEEEEecceecCCCChHHHHHHhcCcccccccccCCcccccccHHHHHHHHHHHccC
Q 017914 191 RLRLSAEKGWLNLGR---DLGISAQVFRLGGIYGPGRSSVDTIIKQLPLSEGQKMRRARQYTSRIHVDDICQVLSASIDK 267 (364)
Q Consensus 191 ~sK~~~E~~~~~~~~---~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~ 267 (364)
.+|...+.+.+.++. ..|+++++++||.+.++.. ...... + ...+.++|+|+.++.++++
T Consensus 150 ~sK~a~~~~~~~l~~el~~~gi~v~~v~pg~v~t~~~-------~~~~~~-------~---~~~~~~~~~a~~i~~~~~~ 212 (243)
T PRK07102 150 SAKAALTAFLSGLRNRLFKSGVHVLTVKPGFVRTPMT-------AGLKLP-------G---PLTAQPEEVAKDIFRAIEK 212 (243)
T ss_pred HHHHHHHHHHHHHHHHhhccCcEEEEEecCcccChhh-------hccCCC-------c---cccCCHHHHHHHHHHHHhC
Confidence 999999999988753 4589999999999877521 111100 0 1236799999999999996
Q ss_pred C
Q 017914 268 P 268 (364)
Q Consensus 268 ~ 268 (364)
+
T Consensus 213 ~ 213 (243)
T PRK07102 213 G 213 (243)
T ss_pred C
Confidence 5
|
|
| >PRK07063 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.64 E-value=1.9e-14 Score=126.44 Aligned_cols=211 Identities=8% Similarity=-0.074 Sum_probs=130.7
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhh--------hCCceEEEccCChhhH--Hhh-------
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELE--------QSGFDVHLFNANETAL--MIL------- 118 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~--------~~~~~~~~~D~~~~~~--~~~------- 118 (364)
..+++||||| +|+||+++++.|+++|++|++++|+.+..+.+. ...+.++.+|++|.+. ..+
T Consensus 5 l~~k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 84 (260)
T PRK07063 5 LAGKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGARVLAVPADVTDAASVAAAVAAAEEAF 84 (260)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHHHHHHHHHHHHHHh
Confidence 3468999999 999999999999999999999999876544321 1246788999999663 222
Q ss_pred ccCceeeEEEEecCCCCCCCChh----hhHHHHH----------HHHhhcCCccEEEEEccceeecCCCCccccCCCCCC
Q 017914 119 TTLKNYTHLLVSIPPLEGTGDPM----LKHGELL----------RSTLMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPAN 184 (364)
Q Consensus 119 ~~~d~v~~~~~~~~~~~~~~~~~----~~~~~~l----------~~a~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~ 184 (364)
..+|.++|+++............ .....|+ +..+.+.+..++|++||...+... .
T Consensus 85 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~ 153 (260)
T PRK07063 85 GPLDVLVNNAGINVFADPLAMTDEDWRRCFAVDLDGAWNGCRAVLPGMVERGRGSIVNIASTHAFKII-----------P 153 (260)
T ss_pred CCCcEEEECCCcCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhhCCeEEEEECChhhccCC-----------C
Confidence 36899999987543211111111 1111222 222233445689999987543211 1
Q ss_pred CCChhHHHHHHHHHHHHHhhhh---cCCcEEEEEecceecCCCChHHHHHHhcCccc--ccccccCCcccccccHHHHHH
Q 017914 185 PTTELGRLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRSSVDTIIKQLPLSE--GQKMRRARQYTSRIHVDDICQ 259 (364)
Q Consensus 185 ~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~i~v~Dva~ 259 (364)
....|+.+|.+.+.+.+.++.+ .|++++.|+||.+-.+... .+.....-.. ...........-+...+|+|.
T Consensus 154 ~~~~Y~~sKaa~~~~~~~la~el~~~gIrvn~v~PG~v~t~~~~---~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~va~ 230 (260)
T PRK07063 154 GCFPYPVAKHGLLGLTRALGIEYAARNVRVNAIAPGYIETQLTE---DWWNAQPDPAAARAETLALQPMKRIGRPEEVAM 230 (260)
T ss_pred CchHHHHHHHHHHHHHHHHHHHhCccCeEEEEEeeCCccChhhh---hhhhccCChHHHHHHHHhcCCCCCCCCHHHHHH
Confidence 2357999999999999988754 3799999999988554211 0000000000 000000000112356899999
Q ss_pred HHHHHccCCC---CCceEEEeCCCC
Q 017914 260 VLSASIDKPS---AWNVYNVVDDDP 281 (364)
Q Consensus 260 ~~~~~l~~~~---~g~~~~i~~~~~ 281 (364)
+++.++.... .|+.+.+.+|..
T Consensus 231 ~~~fl~s~~~~~itG~~i~vdgg~~ 255 (260)
T PRK07063 231 TAVFLASDEAPFINATCITIDGGRS 255 (260)
T ss_pred HHHHHcCccccccCCcEEEECCCee
Confidence 9999987643 378887776643
|
|
| >PRK06198 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.64 E-value=1.6e-14 Score=126.84 Aligned_cols=213 Identities=10% Similarity=-0.006 Sum_probs=133.2
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCE-EEEEEeCchhhhhh----hh--CCceEEEccCChhhH--Hhh-------c
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWV-VSGTCTNVMKKKEL----EQ--SGFDVHLFNANETAL--MIL-------T 119 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~-V~~~~r~~~~~~~l----~~--~~~~~~~~D~~~~~~--~~~-------~ 119 (364)
..+++|+||| +|+||+.++++|.++|++ |++++|+.++.... .. ..+.++.+|+++++. ..+ .
T Consensus 4 ~~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g 83 (260)
T PRK06198 4 LDGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQADLSDVEDCRRVVAAADEAFG 83 (260)
T ss_pred CCCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence 4568999999 999999999999999998 99999986554322 11 246678899998663 222 3
Q ss_pred cCceeeEEEEecCCCCCCCChhh----hHH------HHHHHHh----hcC-CccEEEEEccceeecCCCCccccCCCCCC
Q 017914 120 TLKNYTHLLVSIPPLEGTGDPML----KHG------ELLRSTL----MNG-HLQWLGYLSSTGVYGHSGGAWVDEDYPAN 184 (364)
Q Consensus 120 ~~d~v~~~~~~~~~~~~~~~~~~----~~~------~~l~~a~----~~~-~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~ 184 (364)
.+|.++|+++............. ... .++..++ ... ...++|++||...++...
T Consensus 84 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~ss~~~~~~~~----------- 152 (260)
T PRK06198 84 RLDALVNAAGLTDRGTILDTSPELFDRHFAVNVRAPFFLMQEAIKLMRRRKAEGTIVNIGSMSAHGGQP----------- 152 (260)
T ss_pred CCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECCcccccCCC-----------
Confidence 58999999976432211111111 111 1222222 222 235899999987664322
Q ss_pred CCChhHHHHHHHHHHHHHhhhh---cCCcEEEEEecceecCCCChHHHHHHhcCcccccccccCCcccccccHHHHHHHH
Q 017914 185 PTTELGRLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRSSVDTIIKQLPLSEGQKMRRARQYTSRIHVDDICQVL 261 (364)
Q Consensus 185 ~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~ 261 (364)
....|+.+|...|.+++.++.+ .+++++.++||.+.++............................+++.+|+|+++
T Consensus 153 ~~~~Y~~sK~a~~~~~~~~a~e~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ 232 (260)
T PRK06198 153 FLAAYCASKGALATLTRNAAYALLRNRIRVNGLNIGWMATEGEDRIQREFHGAPDDWLEKAAATQPFGRLLDPDEVARAV 232 (260)
T ss_pred CcchhHHHHHHHHHHHHHHHHHhcccCeEEEEEeeccccCcchhhhhhhccCCChHHHHHHhccCCccCCcCHHHHHHHH
Confidence 2357999999999999887654 3689999999999887532111000000000000000011123458899999999
Q ss_pred HHHccCCC---CCceEEEeCCC
Q 017914 262 SASIDKPS---AWNVYNVVDDD 280 (364)
Q Consensus 262 ~~~l~~~~---~g~~~~i~~~~ 280 (364)
+.++.... .|+.+.+.++.
T Consensus 233 ~~l~~~~~~~~~G~~~~~~~~~ 254 (260)
T PRK06198 233 AFLLSDESGLMTGSVIDFDQSV 254 (260)
T ss_pred HHHcChhhCCccCceEeECCcc
Confidence 99986543 37888887654
|
|
| >PRK07985 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.64 E-value=2.3e-14 Score=127.97 Aligned_cols=205 Identities=13% Similarity=0.049 Sum_probs=129.8
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCch--hhhhhh----h--CCceEEEccCChhhH--Hh-------h
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVM--KKKELE----Q--SGFDVHLFNANETAL--MI-------L 118 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~--~~~~l~----~--~~~~~~~~D~~~~~~--~~-------~ 118 (364)
..++++|||| +|+||++++++|+++|++|++..|+.. ..+.+. . ..+.++.+|++|.+. .. +
T Consensus 47 ~~~k~vlITGas~gIG~aia~~L~~~G~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 126 (294)
T PRK07985 47 LKDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSDEKFARSLVHEAHKAL 126 (294)
T ss_pred cCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEecCCcchhhHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHh
Confidence 4457999999 999999999999999999998876432 222221 1 246678999999663 21 2
Q ss_pred ccCceeeEEEEecCCCCCC-----CChhhhHHHHHH------HHhhc--CCccEEEEEccceeecCCCCccccCCCCCCC
Q 017914 119 TTLKNYTHLLVSIPPLEGT-----GDPMLKHGELLR------STLMN--GHLQWLGYLSSTGVYGHSGGAWVDEDYPANP 185 (364)
Q Consensus 119 ~~~d~v~~~~~~~~~~~~~-----~~~~~~~~~~l~------~a~~~--~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~ 185 (364)
..+|.++|+++........ .+.......|+. .++.. ....++|++||...+.... .
T Consensus 127 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~iSS~~~~~~~~-----------~ 195 (294)
T PRK07985 127 GGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKGASIITTSSIQAYQPSP-----------H 195 (294)
T ss_pred CCCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhcCCEEEEECCchhccCCC-----------C
Confidence 3578999887643211111 111122223332 22221 1125899999987664321 2
Q ss_pred CChhHHHHHHHHHHHHHhhhh---cCCcEEEEEecceecCCCCh---HHHHHHhcCcccccccccCCcccccccHHHHHH
Q 017914 186 TTELGRLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRSS---VDTIIKQLPLSEGQKMRRARQYTSRIHVDDICQ 259 (364)
Q Consensus 186 ~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~ 259 (364)
...|+.+|...+.+++.++.+ .|+++++|+||.+.++.... -...... +... .....+...+|+|+
T Consensus 196 ~~~Y~asKaal~~l~~~la~el~~~gIrvn~i~PG~v~t~~~~~~~~~~~~~~~--~~~~------~~~~r~~~pedva~ 267 (294)
T PRK07985 196 LLDYAATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISGGQTQDKIPQ--FGQQ------TPMKRAGQPAELAP 267 (294)
T ss_pred cchhHHHHHHHHHHHHHHHHHHhHhCcEEEEEECCcCccccccccCCCHHHHHH--Hhcc------CCCCCCCCHHHHHH
Confidence 257999999999999888765 58999999999998874210 0111110 0000 01112467899999
Q ss_pred HHHHHccCCC---CCceEEEeCCC
Q 017914 260 VLSASIDKPS---AWNVYNVVDDD 280 (364)
Q Consensus 260 ~~~~~l~~~~---~g~~~~i~~~~ 280 (364)
+++.++.... .|+++.+.+|.
T Consensus 268 ~~~fL~s~~~~~itG~~i~vdgG~ 291 (294)
T PRK07985 268 VYVYLASQESSYVTAEVHGVCGGE 291 (294)
T ss_pred HHHhhhChhcCCccccEEeeCCCe
Confidence 9999997653 37888887764
|
|
| >PRK07453 protochlorophyllide oxidoreductase; Validated | Back alignment and domain information |
|---|
Probab=99.64 E-value=4.4e-15 Score=134.56 Aligned_cols=166 Identities=16% Similarity=0.180 Sum_probs=110.1
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhh------hCCceEEEccCChhhH--Hhh-------cc
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELE------QSGFDVHLFNANETAL--MIL-------TT 120 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~------~~~~~~~~~D~~~~~~--~~~-------~~ 120 (364)
..+++||||| +|+||.+++++|+++|++|++++|+.++...+. ...+.++.+|++|.+. ..+ ..
T Consensus 4 ~~~k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~ 83 (322)
T PRK07453 4 DAKGTVIITGASSGVGLYAAKALAKRGWHVIMACRNLKKAEAAAQELGIPPDSYTIIHIDLGDLDSVRRFVDDFRALGKP 83 (322)
T ss_pred CCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhccCCceEEEEecCCCHHHHHHHHHHHHHhCCC
Confidence 3467899999 999999999999999999999999876544321 1257788999999763 222 24
Q ss_pred CceeeEEEEecCCCC-----CCCChhhhHHHHHHH----------HhhcCC--ccEEEEEccceeecCC-CCc---c---
Q 017914 121 LKNYTHLLVSIPPLE-----GTGDPMLKHGELLRS----------TLMNGH--LQWLGYLSSTGVYGHS-GGA---W--- 176 (364)
Q Consensus 121 ~d~v~~~~~~~~~~~-----~~~~~~~~~~~~l~~----------a~~~~~--~~r~v~~Ss~~vy~~~-~~~---~--- 176 (364)
+|+++|+++...... ...+.......|+.. .+++.+ ..|+|++||...+... .+. +
T Consensus 84 iD~li~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~riV~vsS~~~~~~~~~~~~~~~~~~ 163 (322)
T PRK07453 84 LDALVCNAAVYMPLLKEPLRSPQGYELSMATNHLGHFLLCNLLLEDLKKSPAPDPRLVILGTVTANPKELGGKIPIPAPA 163 (322)
T ss_pred ccEEEECCcccCCCCCCCCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHhCCCCCceEEEEcccccCccccCCccCCCCcc
Confidence 899999987643211 111112222233322 222222 3599999997654311 000 0
Q ss_pred -----------------ccCCCCCCCCChhHHHHHHHHHHHHHhhhhc----CCcEEEEEecceecC
Q 017914 177 -----------------VDEDYPANPTTELGRLRLSAEKGWLNLGRDL----GISAQVFRLGGIYGP 222 (364)
Q Consensus 177 -----------------~~E~~~~~~~~~Y~~sK~~~E~~~~~~~~~~----~~~~~ilRp~~v~g~ 222 (364)
..+..+..+...|+.||.+.+.+.++++++. |+.++++|||.+++.
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~t 230 (322)
T PRK07453 164 DLGDLSGFEAGFKAPISMADGKKFKPGKAYKDSKLCNMLTMRELHRRYHESTGITFSSLYPGCVADT 230 (322)
T ss_pred chhhhhcchhcccccccccCccCCCccchhhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccCC
Confidence 0112334567889999999988888877653 799999999999753
|
|
| >PRK07814 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.64 E-value=3.1e-14 Score=125.24 Aligned_cols=204 Identities=12% Similarity=-0.021 Sum_probs=130.4
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhh------CCceEEEccCChhhH--Hhh-------cc
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQ------SGFDVHLFNANETAL--MIL-------TT 120 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~------~~~~~~~~D~~~~~~--~~~-------~~ 120 (364)
..++++|||| +|+||.++++.|+++|++|++++|+.++.+.+.. .++.++.+|+++.+. ..+ ..
T Consensus 8 ~~~~~vlItGasggIG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 87 (263)
T PRK07814 8 LDDQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRAAGRRAHVVAADLAHPEATAGLAGQAVEAFGR 87 (263)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 3468999999 9999999999999999999999998765443321 356788999999764 222 36
Q ss_pred CceeeEEEEecCCCCCCCC----hhhhH------HHHHHHHhh-----cCCccEEEEEccceeecCCCCccccCCCCCCC
Q 017914 121 LKNYTHLLVSIPPLEGTGD----PMLKH------GELLRSTLM-----NGHLQWLGYLSSTGVYGHSGGAWVDEDYPANP 185 (364)
Q Consensus 121 ~d~v~~~~~~~~~~~~~~~----~~~~~------~~~l~~a~~-----~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~ 185 (364)
+|+|+|+++.......... ..... ..++..++. ..+.+++|++||..-.. +..+
T Consensus 88 id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~sS~~~~~-----------~~~~ 156 (263)
T PRK07814 88 LDIVVNNVGGTMPNPLLSTSTKDLADAFTFNVATAHALTVAAVPLMLEHSGGGSVINISSTMGRL-----------AGRG 156 (263)
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHhhcHHHHHHHHHHHHHHHhhcCCeEEEEEccccccC-----------CCCC
Confidence 8999999875332111111 11111 123333332 24457899999853221 1124
Q ss_pred CChhHHHHHHHHHHHHHhhhhc--CCcEEEEEecceecCCCChH---HHHHHhcCcccccccccCCcccccccHHHHHHH
Q 017914 186 TTELGRLRLSAEKGWLNLGRDL--GISAQVFRLGGIYGPGRSSV---DTIIKQLPLSEGQKMRRARQYTSRIHVDDICQV 260 (364)
Q Consensus 186 ~~~Y~~sK~~~E~~~~~~~~~~--~~~~~ilRp~~v~g~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~ 260 (364)
...|+.+|...+.+++.++.+. +++++.++||.+..+..... ..+... +... .....+...+|+|++
T Consensus 157 ~~~Y~~sK~a~~~~~~~~~~e~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~--~~~~------~~~~~~~~~~~va~~ 228 (263)
T PRK07814 157 FAAYGTAKAALAHYTRLAALDLCPRIRVNAIAPGSILTSALEVVAANDELRAP--MEKA------TPLRRLGDPEDIAAA 228 (263)
T ss_pred CchhHHHHHHHHHHHHHHHHHHCCCceEEEEEeCCCcCchhhhccCCHHHHHH--HHhc------CCCCCCcCHHHHHHH
Confidence 4689999999999999887643 57899999998865432111 011100 0000 011123678999999
Q ss_pred HHHHccCC---CCCceEEEeCC
Q 017914 261 LSASIDKP---SAWNVYNVVDD 279 (364)
Q Consensus 261 ~~~~l~~~---~~g~~~~i~~~ 279 (364)
++.++... ..|+.+.+.++
T Consensus 229 ~~~l~~~~~~~~~g~~~~~~~~ 250 (263)
T PRK07814 229 AVYLASPAGSYLTGKTLEVDGG 250 (263)
T ss_pred HHHHcCccccCcCCCEEEECCC
Confidence 99999764 23677777655
|
|
| >PRK06114 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.64 E-value=6e-14 Score=122.80 Aligned_cols=206 Identities=11% Similarity=-0.057 Sum_probs=129.5
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchh-hhh----hhh--CCceEEEccCChhhH--Hh-------hc
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMK-KKE----LEQ--SGFDVHLFNANETAL--MI-------LT 119 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~-~~~----l~~--~~~~~~~~D~~~~~~--~~-------~~ 119 (364)
..++++|||| +|+||++++++|.++|++|++++|+.+. ... +.. .++.++.+|++|.+. .. +.
T Consensus 6 ~~~k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g 85 (254)
T PRK06114 6 LDGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTSKADLRAAVARTEAELG 85 (254)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 4568999998 9999999999999999999999997542 121 221 246788999999663 22 23
Q ss_pred cCceeeEEEEecCCCCCCC----ChhhhHHH----------HHHHHhhcCCccEEEEEccceeecCCCCccccCCCCCCC
Q 017914 120 TLKNYTHLLVSIPPLEGTG----DPMLKHGE----------LLRSTLMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANP 185 (364)
Q Consensus 120 ~~d~v~~~~~~~~~~~~~~----~~~~~~~~----------~l~~a~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~ 185 (364)
.+|.++|+++......... +....... .+...+...+.+++|++||...+..... .+
T Consensus 86 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~---------~~ 156 (254)
T PRK06114 86 ALTLAVNAAGIANANPAEEMEEEQWQTVMDINLTGVFLSCQAEARAMLENGGGSIVNIASMSGIIVNRG---------LL 156 (254)
T ss_pred CCCEEEECCCCCCCCChHhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcEEEEECchhhcCCCCC---------CC
Confidence 4799999987643221111 11111111 2223333445568999988653311111 01
Q ss_pred CChhHHHHHHHHHHHHHhhhh---cCCcEEEEEecceecCCCC-h-HHHHHHhcCcccccccccCCcccccccHHHHHHH
Q 017914 186 TTELGRLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRS-S-VDTIIKQLPLSEGQKMRRARQYTSRIHVDDICQV 260 (364)
Q Consensus 186 ~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~ 260 (364)
...|+.+|.+.+.+++.++.+ .|+++++++||.+.++... . ....... .....+ ..-+..++|+|++
T Consensus 157 ~~~Y~~sKaa~~~l~~~la~e~~~~gi~v~~v~PG~i~t~~~~~~~~~~~~~~--~~~~~p------~~r~~~~~dva~~ 228 (254)
T PRK06114 157 QAHYNASKAGVIHLSKSLAMEWVGRGIRVNSISPGYTATPMNTRPEMVHQTKL--FEEQTP------MQRMAKVDEMVGP 228 (254)
T ss_pred cchHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeecCccCcccccccchHHHHH--HHhcCC------CCCCcCHHHHHHH
Confidence 357999999999999888753 4899999999998776421 1 0000000 000000 1123568999999
Q ss_pred HHHHccCCC---CCceEEEeCC
Q 017914 261 LSASIDKPS---AWNVYNVVDD 279 (364)
Q Consensus 261 ~~~~l~~~~---~g~~~~i~~~ 279 (364)
++.++.... .|+++.+.+|
T Consensus 229 ~~~l~s~~~~~~tG~~i~~dgg 250 (254)
T PRK06114 229 AVFLLSDAASFCTGVDLLVDGG 250 (254)
T ss_pred HHHHcCccccCcCCceEEECcC
Confidence 999987543 3788887765
|
|
| >PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.64 E-value=1.6e-14 Score=126.24 Aligned_cols=203 Identities=13% Similarity=0.045 Sum_probs=132.2
Q ss_pred CCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhh------hCCceEEEccCChhhH--Hhh-------ccC
Q 017914 58 SPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELE------QSGFDVHLFNANETAL--MIL-------TTL 121 (364)
Q Consensus 58 ~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~------~~~~~~~~~D~~~~~~--~~~-------~~~ 121 (364)
.++++|||| +|+||+.+++.|+++|++|++++|+..+..... ...+.++.+|+++.+. ..+ ..+
T Consensus 4 ~~~~~lItG~~g~iG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 83 (253)
T PRK08217 4 KDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGALGTEVRGYAANVTDEEDVEATFAQIAEDFGQL 83 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 457899999 899999999999999999999999875543321 1346788999998653 111 347
Q ss_pred ceeeEEEEecCCCCC---------C----CChhhhHHHHHHH----------Hhhc-CCccEEEEEccceeecCCCCccc
Q 017914 122 KNYTHLLVSIPPLEG---------T----GDPMLKHGELLRS----------TLMN-GHLQWLGYLSSTGVYGHSGGAWV 177 (364)
Q Consensus 122 d~v~~~~~~~~~~~~---------~----~~~~~~~~~~l~~----------a~~~-~~~~r~v~~Ss~~vy~~~~~~~~ 177 (364)
|+|+|+++....... . .+.......|+.. .+.+ ....++|++||.+.|+..
T Consensus 84 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~iv~~ss~~~~~~~----- 158 (253)
T PRK08217 84 NGLINNAGILRDGLLVKAKDGKVTSKMSLEQFQSVIDVNLTGVFLCGREAAAKMIESGSKGVIINISSIARAGNM----- 158 (253)
T ss_pred CEEEECCCccCcCcccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEccccccCCC-----
Confidence 999999875332100 0 0001111122221 1212 223479999987766432
Q ss_pred cCCCCCCCCChhHHHHHHHHHHHHHhhhh---cCCcEEEEEecceecCCCCh-HHHHHHhcCcccccccccCCccccccc
Q 017914 178 DEDYPANPTTELGRLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRSS-VDTIIKQLPLSEGQKMRRARQYTSRIH 253 (364)
Q Consensus 178 ~E~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~ 253 (364)
+...|+.+|.+.|.+++.++.+ .+++++.++||.+.++.... ........ . .......+.+
T Consensus 159 -------~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~--~------~~~~~~~~~~ 223 (253)
T PRK08217 159 -------GQTNYSASKAGVAAMTVTWAKELARYGIRVAAIAPGVIETEMTAAMKPEALERL--E------KMIPVGRLGE 223 (253)
T ss_pred -------CCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCccccccCHHHHHHH--H------hcCCcCCCcC
Confidence 3357999999999999888754 58999999999998764321 11111110 0 0011233578
Q ss_pred HHHHHHHHHHHccCCC-CCceEEEeCCC
Q 017914 254 VDDICQVLSASIDKPS-AWNVYNVVDDD 280 (364)
Q Consensus 254 v~Dva~~~~~~l~~~~-~g~~~~i~~~~ 280 (364)
++|+|+++..++.... .|++|++.++.
T Consensus 224 ~~~~a~~~~~l~~~~~~~g~~~~~~gg~ 251 (253)
T PRK08217 224 PEEIAHTVRFIIENDYVTGRVLEIDGGL 251 (253)
T ss_pred HHHHHHHHHHHHcCCCcCCcEEEeCCCc
Confidence 9999999999887643 58899998764
|
|
| >PRK06197 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.64 E-value=4e-14 Score=127.36 Aligned_cols=168 Identities=16% Similarity=0.013 Sum_probs=110.9
Q ss_pred CCCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhh----hh----hCCceEEEccCChhhH--Hhh------
Q 017914 56 WQSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKE----LE----QSGFDVHLFNANETAL--MIL------ 118 (364)
Q Consensus 56 ~~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~----l~----~~~~~~~~~D~~~~~~--~~~------ 118 (364)
...+++||||| +|+||++++++|+++|++|++++|+.++... +. ...+.++.+|++|.+. ..+
T Consensus 13 ~~~~k~vlItGas~gIG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~ 92 (306)
T PRK06197 13 DQSGRVAVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSLASVRAAADALRAA 92 (306)
T ss_pred cCCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHhh
Confidence 45668999999 9999999999999999999999998665332 21 1346788999999763 221
Q ss_pred -ccCceeeEEEEecCCCCCC--CChhhhH----------HHHHHHHhhcCCccEEEEEccceee--cCCCCccccCCCCC
Q 017914 119 -TTLKNYTHLLVSIPPLEGT--GDPMLKH----------GELLRSTLMNGHLQWLGYLSSTGVY--GHSGGAWVDEDYPA 183 (364)
Q Consensus 119 -~~~d~v~~~~~~~~~~~~~--~~~~~~~----------~~~l~~a~~~~~~~r~v~~Ss~~vy--~~~~~~~~~E~~~~ 183 (364)
..+|+++|+++........ .+..... ...++..+++.+.+++|++||.+.+ +........++.+.
T Consensus 93 ~~~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~~~~ 172 (306)
T PRK06197 93 YPRIDLLINNAGVMYTPKQTTADGFELQFGTNHLGHFALTGLLLDRLLPVPGSRVVTVSSGGHRIRAAIHFDDLQWERRY 172 (306)
T ss_pred CCCCCEEEECCccccCCCccCCCCcchhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEECCHHHhccCCCCccccCcccCC
Confidence 3589999999764432211 1111112 2334444555556799999997643 22111112222334
Q ss_pred CCCChhHHHHHHHHHHHHHhhhhc---CCcEEE--EEecceecCC
Q 017914 184 NPTTELGRLRLSAEKGWLNLGRDL---GISAQV--FRLGGIYGPG 223 (364)
Q Consensus 184 ~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i--lRp~~v~g~~ 223 (364)
.+...|+.+|.+.+.+.+.++.+. ++++++ +.||.+..+.
T Consensus 173 ~~~~~Y~~SK~a~~~~~~~la~~l~~~~i~v~~v~~~PG~v~T~~ 217 (306)
T PRK06197 173 NRVAAYGQSKLANLLFTYELQRRLAAAGATTIAVAAHPGVSNTEL 217 (306)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHhhcCCCCeEEEEeCCCcccCcc
Confidence 556789999999999999887543 555544 4799886553
|
|
| >PRK08085 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.63 E-value=4.1e-14 Score=123.85 Aligned_cols=205 Identities=9% Similarity=-0.057 Sum_probs=131.9
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhh----hh--CCceEEEccCChhhH--Hhh-------cc
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKEL----EQ--SGFDVHLFNANETAL--MIL-------TT 120 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l----~~--~~~~~~~~D~~~~~~--~~~-------~~ 120 (364)
..++++|||| +|+||++++++|+++|++|++.+|+.++...+ .. ..+..+.+|++|.+. ..+ ..
T Consensus 7 l~~k~~lItGas~giG~~ia~~L~~~G~~vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 86 (254)
T PRK08085 7 LAGKNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQEGIKAHAAPFNVTHKQEVEAAIEHIEKDIGP 86 (254)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEecCCCCHHHHHHHHHHHHHhcCC
Confidence 3467999999 99999999999999999999999987654432 11 245678899999763 222 35
Q ss_pred CceeeEEEEecCCCCCCCChhh----hHHHH----------HHHHhhcCCccEEEEEccceeecCCCCccccCCCCCCCC
Q 017914 121 LKNYTHLLVSIPPLEGTGDPML----KHGEL----------LRSTLMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANPT 186 (364)
Q Consensus 121 ~d~v~~~~~~~~~~~~~~~~~~----~~~~~----------l~~a~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~ 186 (364)
+|.++|+++............. ....| +...+...+..++|++||..... +....
T Consensus 87 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~-----------~~~~~ 155 (254)
T PRK08085 87 IDVLINNAGIQRRHPFTEFPEQEWNDVIAVNQTAVFLVSQAVARYMVKRQAGKIINICSMQSEL-----------GRDTI 155 (254)
T ss_pred CCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEccchhcc-----------CCCCC
Confidence 7999999976432211111111 11122 22222234557899999864221 11234
Q ss_pred ChhHHHHHHHHHHHHHhhhh---cCCcEEEEEecceecCCCChH---HHHHHhcCcccccccccCCcccccccHHHHHHH
Q 017914 187 TELGRLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRSSV---DTIIKQLPLSEGQKMRRARQYTSRIHVDDICQV 260 (364)
Q Consensus 187 ~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~ 260 (364)
..|+.+|.+.|.+++.++.+ .|+++++|+||.+..+..... ..+... ... ......+...+|+|++
T Consensus 156 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~pG~~~t~~~~~~~~~~~~~~~--~~~------~~p~~~~~~~~~va~~ 227 (254)
T PRK08085 156 TPYAASKGAVKMLTRGMCVELARHNIQVNGIAPGYFKTEMTKALVEDEAFTAW--LCK------RTPAARWGDPQELIGA 227 (254)
T ss_pred cchHHHHHHHHHHHHHHHHHHHhhCeEEEEEEeCCCCCcchhhhccCHHHHHH--HHh------cCCCCCCcCHHHHHHH
Confidence 57999999999999998754 489999999999887642110 011110 000 0011235778999999
Q ss_pred HHHHccCCC---CCceEEEeCCC
Q 017914 261 LSASIDKPS---AWNVYNVVDDD 280 (364)
Q Consensus 261 ~~~~l~~~~---~g~~~~i~~~~ 280 (364)
++.++.... .|++..+.+|.
T Consensus 228 ~~~l~~~~~~~i~G~~i~~dgg~ 250 (254)
T PRK08085 228 AVFLSSKASDFVNGHLLFVDGGM 250 (254)
T ss_pred HHHHhCccccCCcCCEEEECCCe
Confidence 999987643 37777776653
|
|
| >PRK07041 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.63 E-value=1.7e-14 Score=124.37 Aligned_cols=201 Identities=10% Similarity=0.038 Sum_probs=129.6
Q ss_pred EEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhh-----hCCceEEEccCChhhH--Hhh---ccCceeeEEEEec
Q 017914 63 LILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELE-----QSGFDVHLFNANETAL--MIL---TTLKNYTHLLVSI 131 (364)
Q Consensus 63 lVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~-----~~~~~~~~~D~~~~~~--~~~---~~~d~v~~~~~~~ 131 (364)
|||| +|+||++++++|+++|++|++++|+.+....+. ..+++++.+|++|.+. ..+ ..+|.++|+++..
T Consensus 1 lItGas~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~id~li~~ag~~ 80 (230)
T PRK07041 1 LVVGGSSGIGLALARAFAAEGARVTIASRSRDRLAAAARALGGGAPVRTAALDITDEAAVDAFFAEAGPFDHVVITAADT 80 (230)
T ss_pred CeecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHhcCCCCEEEECCCCC
Confidence 5899 999999999999999999999999866544332 1357789999999764 333 3478898888754
Q ss_pred CCCCCCC----ChhhhHHH------HHHHHhhcCCccEEEEEccceeecCCCCccccCCCCCCCCChhHHHHHHHHHHHH
Q 017914 132 PPLEGTG----DPMLKHGE------LLRSTLMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANPTTELGRLRLSAEKGWL 201 (364)
Q Consensus 132 ~~~~~~~----~~~~~~~~------~l~~a~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~~sK~~~E~~~~ 201 (364)
....... +....... ++..+....+.+++|++||...+... .+...|+.+|.+.+.+++
T Consensus 81 ~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~g~iv~~ss~~~~~~~-----------~~~~~Y~~sK~a~~~~~~ 149 (230)
T PRK07041 81 PGGPVRALPLAAAQAAMDSKFWGAYRVARAARIAPGGSLTFVSGFAAVRPS-----------ASGVLQGAINAALEALAR 149 (230)
T ss_pred CCCChhhCCHHHHHHHHHHHHHHHHHHHhhhhhcCCeEEEEECchhhcCCC-----------CcchHHHHHHHHHHHHHH
Confidence 3321111 11111112 23333333456799999988765322 234679999999999999
Q ss_pred Hhhhhc-CCcEEEEEecceecCCCChH-----HHHHHhcCcccccccccCCcccccccHHHHHHHHHHHccCC-CCCceE
Q 017914 202 NLGRDL-GISAQVFRLGGIYGPGRSSV-----DTIIKQLPLSEGQKMRRARQYTSRIHVDDICQVLSASIDKP-SAWNVY 274 (364)
Q Consensus 202 ~~~~~~-~~~~~ilRp~~v~g~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~-~~g~~~ 274 (364)
.++.+. +++++.++||.+-.+..... ..+... ...... ...+...+|+|++++.++... ..|+.|
T Consensus 150 ~la~e~~~irv~~i~pg~~~t~~~~~~~~~~~~~~~~~--~~~~~~------~~~~~~~~dva~~~~~l~~~~~~~G~~~ 221 (230)
T PRK07041 150 GLALELAPVRVNTVSPGLVDTPLWSKLAGDAREAMFAA--AAERLP------ARRVGQPEDVANAILFLAANGFTTGSTV 221 (230)
T ss_pred HHHHHhhCceEEEEeecccccHHHHhhhccchHHHHHH--HHhcCC------CCCCcCHHHHHHHHHHHhcCCCcCCcEE
Confidence 887553 58899999987754321000 000000 000000 012356899999999999866 338899
Q ss_pred EEeCCCCC
Q 017914 275 NVVDDDPA 282 (364)
Q Consensus 275 ~i~~~~~~ 282 (364)
++.+|..+
T Consensus 222 ~v~gg~~~ 229 (230)
T PRK07041 222 LVDGGHAI 229 (230)
T ss_pred EeCCCeec
Confidence 99887643
|
|
| >PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.63 E-value=4.1e-14 Score=123.90 Aligned_cols=205 Identities=13% Similarity=0.009 Sum_probs=132.2
Q ss_pred CCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCch-hhhhhhhCCceEEEccCChhhH--Hhh-------ccCceeeE
Q 017914 58 SPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVM-KKKELEQSGFDVHLFNANETAL--MIL-------TTLKNYTH 126 (364)
Q Consensus 58 ~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~-~~~~l~~~~~~~~~~D~~~~~~--~~~-------~~~d~v~~ 126 (364)
.+|+++||| +|+||++++++|.++|++|+++.|+.+ ....+...++.++.+|++|.+. ..+ ..+|.++|
T Consensus 6 ~~k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~li~ 85 (255)
T PRK06463 6 KGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAENEAKELREKGVFTIKCDVGNRDQVKKSKEVVEKEFGRVDVLVN 85 (255)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHhCCCeEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 458999999 999999999999999999998876543 3334444468899999999764 222 35799999
Q ss_pred EEEecCCCC--CCC--ChhhhHHHH----------HHHHhhcCCccEEEEEccceeecCCCCccccCCCCCCCCChhHHH
Q 017914 127 LLVSIPPLE--GTG--DPMLKHGEL----------LRSTLMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANPTTELGRL 192 (364)
Q Consensus 127 ~~~~~~~~~--~~~--~~~~~~~~~----------l~~a~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~~s 192 (364)
+++...... ... +.......| ++..++..+..++|++||...++... .....|+.+
T Consensus 86 ~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~~----------~~~~~Y~as 155 (255)
T PRK06463 86 NAGIMYLMPFEEFDEEKYNKMIKINLNGAIYTTYEFLPLLKLSKNGAIVNIASNAGIGTAA----------EGTTFYAIT 155 (255)
T ss_pred CCCcCCCCChhhCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHhCCCCC----------CCccHhHHH
Confidence 987643211 011 111111222 23333344557999999976553211 123579999
Q ss_pred HHHHHHHHHHhhhh---cCCcEEEEEecceecCCCC------hHHHHHHhcCcccccccccCCcccccccHHHHHHHHHH
Q 017914 193 RLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRS------SVDTIIKQLPLSEGQKMRRARQYTSRIHVDDICQVLSA 263 (364)
Q Consensus 193 K~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~ 263 (364)
|.+.+.+++.++.+ .++++++++||.+-.+... ....+... .........+...+|+|++++.
T Consensus 156 Kaa~~~~~~~la~e~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~va~~~~~ 227 (255)
T PRK06463 156 KAGIIILTRRLAFELGKYGIRVNAVAPGWVETDMTLSGKSQEEAEKLREL--------FRNKTVLKTTGKPEDIANIVLF 227 (255)
T ss_pred HHHHHHHHHHHHHHhhhcCeEEEEEeeCCCCCchhhcccCccchHHHHHH--------HHhCCCcCCCcCHHHHHHHHHH
Confidence 99999999988754 4899999999987543210 00000000 0000111234678999999999
Q ss_pred HccCCC---CCceEEEeCCC
Q 017914 264 SIDKPS---AWNVYNVVDDD 280 (364)
Q Consensus 264 ~l~~~~---~g~~~~i~~~~ 280 (364)
++.... .|+.+.+.+|.
T Consensus 228 l~s~~~~~~~G~~~~~dgg~ 247 (255)
T PRK06463 228 LASDDARYITGQVIVADGGR 247 (255)
T ss_pred HcChhhcCCCCCEEEECCCe
Confidence 997653 38888887764
|
|
| >PRK06949 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.63 E-value=5.7e-14 Score=123.21 Aligned_cols=204 Identities=12% Similarity=-0.009 Sum_probs=129.9
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhh------CCceEEEccCChhhH--Hhh-------cc
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQ------SGFDVHLFNANETAL--MIL-------TT 120 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~------~~~~~~~~D~~~~~~--~~~-------~~ 120 (364)
..+++||||| +|+||++++++|.++|++|+++.|+.++.+.+.. .++.++.+|+++.+. ..+ ..
T Consensus 7 ~~~k~ilItGasg~IG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 86 (258)
T PRK06949 7 LEGKVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEAEGGAAHVVSLDVTDYQSIKAAVAHAETEAGT 86 (258)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhcCC
Confidence 4568999999 9999999999999999999999998776544321 357789999998653 222 35
Q ss_pred CceeeEEEEecCCCCCCC----ChhhhHHH------HHHHHh----hcCC--------ccEEEEEccceeecCCCCcccc
Q 017914 121 LKNYTHLLVSIPPLEGTG----DPMLKHGE------LLRSTL----MNGH--------LQWLGYLSSTGVYGHSGGAWVD 178 (364)
Q Consensus 121 ~d~v~~~~~~~~~~~~~~----~~~~~~~~------~l~~a~----~~~~--------~~r~v~~Ss~~vy~~~~~~~~~ 178 (364)
+|.++|+++......... +....... ++..++ .... ..++|++||...+...
T Consensus 87 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~------ 160 (258)
T PRK06949 87 IDILVNNSGVSTTQKLVDVTPADFDFVFDTNTRGAFFVAQEVAKRMIARAKGAGNTKPGGRIINIASVAGLRVL------ 160 (258)
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcCCCCCCCeEEEEECcccccCCC------
Confidence 799999987543211111 11111111 122221 1111 3589999987654221
Q ss_pred CCCCCCCCChhHHHHHHHHHHHHHhhhh---cCCcEEEEEecceecCCCCh--HHHHHHhcCcccccccccCCccccccc
Q 017914 179 EDYPANPTTELGRLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRSS--VDTIIKQLPLSEGQKMRRARQYTSRIH 253 (364)
Q Consensus 179 E~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~i~ 253 (364)
.....|+.+|.+.+.+++.++.+ .++++++++||.++++.... ....... +..... ...+..
T Consensus 161 -----~~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~--~~~~~~------~~~~~~ 227 (258)
T PRK06949 161 -----PQIGLYCMSKAAVVHMTRAMALEWGRHGINVNAICPGYIDTEINHHHWETEQGQK--LVSMLP------RKRVGK 227 (258)
T ss_pred -----CCccHHHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCCcCCcchhccChHHHHH--HHhcCC------CCCCcC
Confidence 23467999999999999888654 48999999999998865321 1111000 000000 112355
Q ss_pred HHHHHHHHHHHccCCC---CCceEEEeCC
Q 017914 254 VDDICQVLSASIDKPS---AWNVYNVVDD 279 (364)
Q Consensus 254 v~Dva~~~~~~l~~~~---~g~~~~i~~~ 279 (364)
.+|+++++..++.... .|+.+.+.++
T Consensus 228 p~~~~~~~~~l~~~~~~~~~G~~i~~dgg 256 (258)
T PRK06949 228 PEDLDGLLLLLAADESQFINGAIISADDG 256 (258)
T ss_pred HHHHHHHHHHHhChhhcCCCCcEEEeCCC
Confidence 7999999999987543 3666665443
|
|
| >PRK06483 dihydromonapterin reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.63 E-value=8.9e-14 Score=120.31 Aligned_cols=203 Identities=12% Similarity=0.010 Sum_probs=127.5
Q ss_pred CCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhh-hhhhhCCceEEEccCChhhH--Hh-------hccCceeeE
Q 017914 58 SPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKK-KELEQSGFDVHLFNANETAL--MI-------LTTLKNYTH 126 (364)
Q Consensus 58 ~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~-~~l~~~~~~~~~~D~~~~~~--~~-------~~~~d~v~~ 126 (364)
+++++|||| +|.||+++++.|+++|++|++++|+..+. ..+...++.++.+|++|.+. .. +..+|+++|
T Consensus 1 ~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~ 80 (236)
T PRK06483 1 MPAPILITGAGQRIGLALAWHLLAQGQPVIVSYRTHYPAIDGLRQAGAQCIQADFSTNAGIMAFIDELKQHTDGLRAIIH 80 (236)
T ss_pred CCceEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCEEEEcCCCCHHHHHHHHHHHHhhCCCccEEEE
Confidence 357899999 99999999999999999999999976532 23334567889999998653 11 134799999
Q ss_pred EEEecCCCCCCCChhh----hHHHH----------HHHHhhcCC--ccEEEEEccceeecCCCCccccCCCCCCCCChhH
Q 017914 127 LLVSIPPLEGTGDPML----KHGEL----------LRSTLMNGH--LQWLGYLSSTGVYGHSGGAWVDEDYPANPTTELG 190 (364)
Q Consensus 127 ~~~~~~~~~~~~~~~~----~~~~~----------l~~a~~~~~--~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~ 190 (364)
+++............. ....| +...++..+ ..++|++||...... ......|+
T Consensus 81 ~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~~~g~iv~~ss~~~~~~-----------~~~~~~Y~ 149 (236)
T PRK06483 81 NASDWLAEKPGAPLADVLARMMQIHVNAPYLLNLALEDLLRGHGHAASDIIHITDYVVEKG-----------SDKHIAYA 149 (236)
T ss_pred CCccccCCCcCccCHHHHHHHHHHcchHHHHHHHHHHHHHHhCCCCCceEEEEcchhhccC-----------CCCCccHH
Confidence 9875432211111111 11112 222222332 458999988542211 11235799
Q ss_pred HHHHHHHHHHHHhhhhc--CCcEEEEEecceecCCCChHHHHHHhcCcccccccccCCcccccccHHHHHHHHHHHccCC
Q 017914 191 RLRLSAEKGWLNLGRDL--GISAQVFRLGGIYGPGRSSVDTIIKQLPLSEGQKMRRARQYTSRIHVDDICQVLSASIDKP 268 (364)
Q Consensus 191 ~sK~~~E~~~~~~~~~~--~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~ 268 (364)
.+|...|.+++.++.+. +++++.|+||.+....... ....... ... ... .-+...+|+|+++..++...
T Consensus 150 asKaal~~l~~~~a~e~~~~irvn~v~Pg~~~~~~~~~-~~~~~~~-~~~-~~~------~~~~~~~~va~~~~~l~~~~ 220 (236)
T PRK06483 150 ASKAALDNMTLSFAAKLAPEVKVNSIAPALILFNEGDD-AAYRQKA-LAK-SLL------KIEPGEEEIIDLVDYLLTSC 220 (236)
T ss_pred HHHHHHHHHHHHHHHHHCCCcEEEEEccCceecCCCCC-HHHHHHH-hcc-Ccc------ccCCCHHHHHHHHHHHhcCC
Confidence 99999999999988664 5899999999874322111 1111110 000 000 01245899999999988643
Q ss_pred -CCCceEEEeCCC
Q 017914 269 -SAWNVYNVVDDD 280 (364)
Q Consensus 269 -~~g~~~~i~~~~ 280 (364)
-.|+++.+.+|.
T Consensus 221 ~~~G~~i~vdgg~ 233 (236)
T PRK06483 221 YVTGRSLPVDGGR 233 (236)
T ss_pred CcCCcEEEeCccc
Confidence 337888887664
|
|
| >PRK08265 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.63 E-value=3.4e-14 Score=124.87 Aligned_cols=208 Identities=9% Similarity=-0.041 Sum_probs=129.6
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhh---CCceEEEccCChhhH--Hhh-------ccCce
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQ---SGFDVHLFNANETAL--MIL-------TTLKN 123 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~---~~~~~~~~D~~~~~~--~~~-------~~~d~ 123 (364)
..++++|||| +|.||+++++.|+++|++|++++|+.++...+.. .++.++.+|++|.+. ..+ ..+|.
T Consensus 4 ~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~ 83 (261)
T PRK08265 4 LAGKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASLGERARFIATDITDDAAIERAVATVVARFGRVDI 83 (261)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCeeEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence 3468999999 9999999999999999999999998765443321 357889999999663 222 35799
Q ss_pred eeEEEEecCCCCCCCChhh----hHHHHHH----------HHhhcCCccEEEEEccceeecCCCCccccCCCCCCCCChh
Q 017914 124 YTHLLVSIPPLEGTGDPML----KHGELLR----------STLMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANPTTEL 189 (364)
Q Consensus 124 v~~~~~~~~~~~~~~~~~~----~~~~~l~----------~a~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y 189 (364)
++|+++...... ...... ....|+. ..++ .+..++|++||...+... .....|
T Consensus 84 lv~~ag~~~~~~-~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-~~~g~ii~isS~~~~~~~-----------~~~~~Y 150 (261)
T PRK08265 84 LVNLACTYLDDG-LASSRADWLAALDVNLVSAAMLAQAAHPHLA-RGGGAIVNFTSISAKFAQ-----------TGRWLY 150 (261)
T ss_pred EEECCCCCCCCc-CcCCHHHHHHHHhHhhHHHHHHHHHHHHHHh-cCCcEEEEECchhhccCC-----------CCCchh
Confidence 999887543211 111111 1112222 2222 234589999886532111 123579
Q ss_pred HHHHHHHHHHHHHhhhh---cCCcEEEEEecceecCCCChHHHHHHhcCcccccccccCCcccccccHHHHHHHHHHHcc
Q 017914 190 GRLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRSSVDTIIKQLPLSEGQKMRRARQYTSRIHVDDICQVLSASID 266 (364)
Q Consensus 190 ~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~ 266 (364)
+.+|...+.+.+.++.+ .|+++++|+||.+..+... .+...................-+...+|+|++++.++.
T Consensus 151 ~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~~~t~~~~---~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~~~~l~s 227 (261)
T PRK08265 151 PASKAAIRQLTRSMAMDLAPDGIRVNSVSPGWTWSRVMD---ELSGGDRAKADRVAAPFHLLGRVGDPEEVAQVVAFLCS 227 (261)
T ss_pred HHHHHHHHHHHHHHHHHhcccCEEEEEEccCCccChhhh---hhcccchhHHHHhhcccCCCCCccCHHHHHHHHHHHcC
Confidence 99999999999887654 4799999999987654211 11000000000000000001123568999999999997
Q ss_pred CCC---CCceEEEeCCC
Q 017914 267 KPS---AWNVYNVVDDD 280 (364)
Q Consensus 267 ~~~---~g~~~~i~~~~ 280 (364)
... .|+.+.+.+|.
T Consensus 228 ~~~~~~tG~~i~vdgg~ 244 (261)
T PRK08265 228 DAASFVTGADYAVDGGY 244 (261)
T ss_pred ccccCccCcEEEECCCe
Confidence 642 37888887763
|
|
| >PRK09242 tropinone reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.63 E-value=6.3e-14 Score=122.89 Aligned_cols=204 Identities=11% Similarity=-0.043 Sum_probs=130.4
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhh--------hCCceEEEccCChhhH--H-------hh
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELE--------QSGFDVHLFNANETAL--M-------IL 118 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~--------~~~~~~~~~D~~~~~~--~-------~~ 118 (364)
..++++|||| +|.||+++++.|.++|++|++++|+.++...+. ..++.++.+|+++.+. . .+
T Consensus 7 ~~~k~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 86 (257)
T PRK09242 7 LDGQTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFPEREVHGLAADVSDDEDRRAILDWVEDHW 86 (257)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 3468999999 899999999999999999999999876544332 1246788999998653 1 12
Q ss_pred ccCceeeEEEEecCCCCCCC----ChhhhHH------HHHHHH----hhcCCccEEEEEccceeecCCCCccccCCCCCC
Q 017914 119 TTLKNYTHLLVSIPPLEGTG----DPMLKHG------ELLRST----LMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPAN 184 (364)
Q Consensus 119 ~~~d~v~~~~~~~~~~~~~~----~~~~~~~------~~l~~a----~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~ 184 (364)
..+|.++|+++......... +...... .++..+ ++..+.+++|++||...+... .
T Consensus 87 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~~~~-----------~ 155 (257)
T PRK09242 87 DGLHILVNNAGGNIRKAAIDYTEDEWRGIFETNLFSAFELSRYAHPLLKQHASSAIVNIGSVSGLTHV-----------R 155 (257)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCceEEEECccccCCCC-----------C
Confidence 45799999887532211101 1111111 122222 234455789999987654322 2
Q ss_pred CCChhHHHHHHHHHHHHHhhhh---cCCcEEEEEecceecCCCCh-H--HHHHHhcCcccccccccCCcccccccHHHHH
Q 017914 185 PTTELGRLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRSS-V--DTIIKQLPLSEGQKMRRARQYTSRIHVDDIC 258 (364)
Q Consensus 185 ~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva 258 (364)
+...|+.+|...+.+++.++.+ .+++++.++||.+.++.... . ..+.... ..... ..-+...+|++
T Consensus 156 ~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~i~t~~~~~~~~~~~~~~~~--~~~~~------~~~~~~~~~va 227 (257)
T PRK09242 156 SGAPYGMTKAALLQMTRNLAVEWAEDGIRVNAVAPWYIRTPLTSGPLSDPDYYEQV--IERTP------MRRVGEPEEVA 227 (257)
T ss_pred CCcchHHHHHHHHHHHHHHHHHHHHhCeEEEEEEECCCCCcccccccCChHHHHHH--HhcCC------CCCCcCHHHHH
Confidence 3467999999999999987643 48999999999987764221 0 1111100 00000 11124679999
Q ss_pred HHHHHHccCCC---CCceEEEeCC
Q 017914 259 QVLSASIDKPS---AWNVYNVVDD 279 (364)
Q Consensus 259 ~~~~~~l~~~~---~g~~~~i~~~ 279 (364)
.++..++.... .|+.+.+.++
T Consensus 228 ~~~~~l~~~~~~~~~g~~i~~~gg 251 (257)
T PRK09242 228 AAVAFLCMPAASYITGQCIAVDGG 251 (257)
T ss_pred HHHHHHhCcccccccCCEEEECCC
Confidence 99999987542 3777777654
|
|
| >PRK08264 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.62 E-value=2.7e-14 Score=123.67 Aligned_cols=179 Identities=9% Similarity=-0.016 Sum_probs=123.5
Q ss_pred CCCeEEEEc-CChhhHHHHHHHHhCCC-EEEEEEeCchhhhhhhhCCceEEEccCChhhH--Hhh---ccCceeeEEEEe
Q 017914 58 SPNRMLILG-MGFVGRIFAEKIKNQGW-VVSGTCTNVMKKKELEQSGFDVHLFNANETAL--MIL---TTLKNYTHLLVS 130 (364)
Q Consensus 58 ~~~~vlVtG-tG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~--~~~---~~~d~v~~~~~~ 130 (364)
.+++||||| +|+||+++++.|+++|+ +|++++|+.++... ...++.++.+|+.|.+. ..+ ..+|+|+|+++.
T Consensus 5 ~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~ag~ 83 (238)
T PRK08264 5 KGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD-LGPRVVPLQLDVTDPASVAAAAEAASDVTILVNNAGI 83 (238)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh-cCCceEEEEecCCCHHHHHHHHHhcCCCCEEEECCCc
Confidence 457899998 99999999999999998 99999998766543 22468899999999663 333 357999999976
Q ss_pred cCCCCCCCC-----hhhhH------HHHHHHHh----hcCCccEEEEEccceeecCCCCccccCCCCCCCCChhHHHHHH
Q 017914 131 IPPLEGTGD-----PMLKH------GELLRSTL----MNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANPTTELGRLRLS 195 (364)
Q Consensus 131 ~~~~~~~~~-----~~~~~------~~~l~~a~----~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~~sK~~ 195 (364)
........+ ..... ..++..++ +..+.+++|++||...+... .+...|+.+|..
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~~~-----------~~~~~y~~sK~a 152 (238)
T PRK08264 84 FRTGSLLLEGDEDALRAEMETNYFGPLAMARAFAPVLAANGGGAIVNVLSVLSWVNF-----------PNLGTYSASKAA 152 (238)
T ss_pred CCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhccCC-----------CCchHhHHHHHH
Confidence 222211111 11111 12233332 23456789999987655321 234679999999
Q ss_pred HHHHHHHhhhh---cCCcEEEEEecceecCCCChHHHHHHhcCcccccccccCCcccccccHHHHHHHHHHHccCC
Q 017914 196 AEKGWLNLGRD---LGISAQVFRLGGIYGPGRSSVDTIIKQLPLSEGQKMRRARQYTSRIHVDDICQVLSASIDKP 268 (364)
Q Consensus 196 ~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~ 268 (364)
.|.+.+.++.. .+++++++|||.+.++... .. . ...+..+|+++.++..+...
T Consensus 153 ~~~~~~~l~~~~~~~~i~~~~v~pg~v~t~~~~-------~~---------~----~~~~~~~~~a~~~~~~~~~~ 208 (238)
T PRK08264 153 AWSLTQALRAELAPQGTRVLGVHPGPIDTDMAA-------GL---------D----APKASPADVARQILDALEAG 208 (238)
T ss_pred HHHHHHHHHHHhhhcCeEEEEEeCCcccccccc-------cC---------C----cCCCCHHHHHHHHHHHHhCC
Confidence 99998887654 3899999999988654211 00 0 01377899999999988864
|
|
| >PRK07069 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.62 E-value=2.1e-14 Score=125.43 Aligned_cols=206 Identities=13% Similarity=-0.004 Sum_probs=128.4
Q ss_pred eEEEEc-CChhhHHHHHHHHhCCCEEEEEEeC-chhhhhhhh----C----CceEEEccCChhhH--Hh-------hccC
Q 017914 61 RMLILG-MGFVGRIFAEKIKNQGWVVSGTCTN-VMKKKELEQ----S----GFDVHLFNANETAL--MI-------LTTL 121 (364)
Q Consensus 61 ~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~-~~~~~~l~~----~----~~~~~~~D~~~~~~--~~-------~~~~ 121 (364)
+||||| +|+||+++++.|+++|++|++++|+ .+....+.+ . .+..+.+|++|.+. .. +..+
T Consensus 1 ~ilVtG~~~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 80 (251)
T PRK07069 1 RAFITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVTDEAQWQALLAQAADAMGGL 80 (251)
T ss_pred CEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCCceEEEEEeecCCHHHHHHHHHHHHHHcCCc
Confidence 489998 9999999999999999999999997 443332221 1 13357789999663 22 2357
Q ss_pred ceeeEEEEecCCCCCCCChhhh--------------HHHHHHHHhhcCCccEEEEEccceeecCCCCccccCCCCCCCCC
Q 017914 122 KNYTHLLVSIPPLEGTGDPMLK--------------HGELLRSTLMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANPTT 187 (364)
Q Consensus 122 d~v~~~~~~~~~~~~~~~~~~~--------------~~~~l~~a~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~ 187 (364)
|.++|+++.............. ...+++..+++.+.+++|++||...+.... ...
T Consensus 81 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~ss~~~~~~~~-----------~~~ 149 (251)
T PRK07069 81 SVLVNNAGVGSFGAIEQIELDEWRRVMAINVESIFLGCKHALPYLRASQPASIVNISSVAAFKAEP-----------DYT 149 (251)
T ss_pred cEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEecChhhccCCC-----------CCc
Confidence 9999998764432111111111 223455555566678999999976654322 235
Q ss_pred hhHHHHHHHHHHHHHhhhh-----cCCcEEEEEecceecCCCChHHHHHHhcCcccccccccCCcccccccHHHHHHHHH
Q 017914 188 ELGRLRLSAEKGWLNLGRD-----LGISAQVFRLGGIYGPGRSSVDTIIKQLPLSEGQKMRRARQYTSRIHVDDICQVLS 262 (364)
Q Consensus 188 ~Y~~sK~~~E~~~~~~~~~-----~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~ 262 (364)
.|+.+|...+.+++.++.+ .+++++.++||.+.++.............. ............+.+++|+|++++
T Consensus 150 ~Y~~sK~a~~~~~~~la~e~~~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~va~~~~ 227 (251)
T PRK07069 150 AYNASKAAVASLTKSIALDCARRGLDVRCNSIHPTFIRTGIVDPIFQRLGEEEA--TRKLARGVPLGRLGEPDDVAHAVL 227 (251)
T ss_pred hhHHHHHHHHHHHHHHHHHhcccCCcEEEEEEeecccCCcchhHHhhhccchhH--HHHHhccCCCCCCcCHHHHHHHHH
Confidence 7999999999999887643 248899999999887653211100000000 000001111223467999999999
Q ss_pred HHccCCC---CCceEEEeCC
Q 017914 263 ASIDKPS---AWNVYNVVDD 279 (364)
Q Consensus 263 ~~l~~~~---~g~~~~i~~~ 279 (364)
.++.... .|+.+.+.++
T Consensus 228 ~l~~~~~~~~~g~~i~~~~g 247 (251)
T PRK07069 228 YLASDESRFVTGAELVIDGG 247 (251)
T ss_pred HHcCccccCccCCEEEECCC
Confidence 9887642 3666666554
|
|
| >KOG1203 consensus Predicted dehydrogenase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.62 E-value=2.9e-14 Score=128.20 Aligned_cols=201 Identities=14% Similarity=0.120 Sum_probs=122.7
Q ss_pred CCCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhh-----CCceEEEccCChhhH---Hhhcc----Cc
Q 017914 56 WQSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQ-----SGFDVHLFNANETAL---MILTT----LK 122 (364)
Q Consensus 56 ~~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~-----~~~~~~~~D~~~~~~---~~~~~----~d 122 (364)
...+++|||+| ||.+|+.+++.|+++|+.|++++|+.++...+.. .+...+..|...... ..... ..
T Consensus 76 ~~~~~~VlVvGatG~vG~~iv~~llkrgf~vra~VRd~~~a~~~~~~~~~d~~~~~v~~~~~~~~d~~~~~~~~~~~~~~ 155 (411)
T KOG1203|consen 76 SKKPTTVLVVGATGKVGRRIVKILLKRGFSVRALVRDEQKAEDLLGVFFVDLGLQNVEADVVTAIDILKKLVEAVPKGVV 155 (411)
T ss_pred CCCCCeEEEecCCCchhHHHHHHHHHCCCeeeeeccChhhhhhhhcccccccccceeeeccccccchhhhhhhhccccce
Confidence 34557999999 9999999999999999999999999887766532 344455555544321 12222 22
Q ss_pred eeeEEEEecCCCC---CCCChhhhHHHHHHHHhhcCCccEEEEEccceeecCCCCccccCCCCCCCCChhHHHHHHHHHH
Q 017914 123 NYTHLLVSIPPLE---GTGDPMLKHGELLRSTLMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANPTTELGRLRLSAEKG 199 (364)
Q Consensus 123 ~v~~~~~~~~~~~---~~~~~~~~~~~~l~~a~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~~sK~~~E~~ 199 (364)
+++-+++..+... ..........+|+++||+..|++|+|++|+++.-......++.. -...+-.+|..+|++
T Consensus 156 ~v~~~~ggrp~~ed~~~p~~VD~~g~knlvdA~~~aGvk~~vlv~si~~~~~~~~~~~~~-----~~~~~~~~k~~~e~~ 230 (411)
T KOG1203|consen 156 IVIKGAGGRPEEEDIVTPEKVDYEGTKNLVDACKKAGVKRVVLVGSIGGTKFNQPPNILL-----LNGLVLKAKLKAEKF 230 (411)
T ss_pred eEEecccCCCCcccCCCcceecHHHHHHHHHHHHHhCCceEEEEEeecCcccCCCchhhh-----hhhhhhHHHHhHHHH
Confidence 3333333333221 11123346679999999999999999998865321111111100 012344777777776
Q ss_pred HHHhhhhcCCcEEEEEecceecCCCChHHHHHHhcCcccccccccCCcccccccHHHHHHHHHHHccCCCC
Q 017914 200 WLNLGRDLGISAQVFRLGGIYGPGRSSVDTIIKQLPLSEGQKMRRARQYTSRIHVDDICQVLSASIDKPSA 270 (364)
Q Consensus 200 ~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~~ 270 (364)
+. ++|++++|||++...-................. .+...--.+...|+|+.++.++.+...
T Consensus 231 ~~----~Sgl~ytiIR~g~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~i~r~~vael~~~all~~~~ 292 (411)
T KOG1203|consen 231 LQ----DSGLPYTIIRPGGLEQDTGGQREVVVDDEKELL-----TVDGGAYSISRLDVAELVAKALLNEAA 292 (411)
T ss_pred HH----hcCCCcEEEeccccccCCCCcceecccCccccc-----cccccceeeehhhHHHHHHHHHhhhhh
Confidence 65 679999999999876544332111111111100 111100248899999999999988744
|
|
| >PRK07035 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.62 E-value=5.6e-14 Score=122.80 Aligned_cols=204 Identities=11% Similarity=0.002 Sum_probs=130.5
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhh------CCceEEEccCChhhH--Hh-------hcc
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQ------SGFDVHLFNANETAL--MI-------LTT 120 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~------~~~~~~~~D~~~~~~--~~-------~~~ 120 (364)
..+++||||| +|+||.+++++|+++|++|++++|+.++.+.+.+ ....++.+|+.+.+. .. +..
T Consensus 6 l~~k~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 85 (252)
T PRK07035 6 LTGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAAGGKAEALACHIGEMEQIDALFAHIRERHGR 85 (252)
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 4457899999 9999999999999999999999998765443321 235778899998653 22 235
Q ss_pred CceeeEEEEecCCCCCC-CC----hhhhHHHH----------HHHHhhcCCccEEEEEccceeecCCCCccccCCCCCCC
Q 017914 121 LKNYTHLLVSIPPLEGT-GD----PMLKHGEL----------LRSTLMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANP 185 (364)
Q Consensus 121 ~d~v~~~~~~~~~~~~~-~~----~~~~~~~~----------l~~a~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~ 185 (364)
+|.++|+++........ .. .......| ++..++..+.+++|++||...+.. ..+
T Consensus 86 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~-----------~~~ 154 (252)
T PRK07035 86 LDILVNNAAANPYFGHILDTDLGAFQKTVDVNIRGYFFMSVEAGKLMKEQGGGSIVNVASVNGVSP-----------GDF 154 (252)
T ss_pred CCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCcEEEEECchhhcCC-----------CCC
Confidence 79999998753321111 11 11112222 222334555678999988643211 123
Q ss_pred CChhHHHHHHHHHHHHHhhhh---cCCcEEEEEecceecCCCCh-H--HHHHHhcCcccccccccCCcccccccHHHHHH
Q 017914 186 TTELGRLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRSS-V--DTIIKQLPLSEGQKMRRARQYTSRIHVDDICQ 259 (364)
Q Consensus 186 ~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~ 259 (364)
...|+.+|...|.+++.++.+ .|++++.+.||.+..+.... . ...... ...... ...+...+|+|+
T Consensus 155 ~~~Y~~sK~al~~~~~~l~~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~--~~~~~~------~~~~~~~~~va~ 226 (252)
T PRK07035 155 QGIYSITKAAVISMTKAFAKECAPFGIRVNALLPGLTDTKFASALFKNDAILKQ--ALAHIP------LRRHAEPSEMAG 226 (252)
T ss_pred CcchHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeccccCcccccccCCHHHHHH--HHccCC------CCCcCCHHHHHH
Confidence 467999999999999988754 37999999999886543111 0 011110 000000 112366899999
Q ss_pred HHHHHccCCC---CCceEEEeCC
Q 017914 260 VLSASIDKPS---AWNVYNVVDD 279 (364)
Q Consensus 260 ~~~~~l~~~~---~g~~~~i~~~ 279 (364)
+++.++.... .|+++.+.+|
T Consensus 227 ~~~~l~~~~~~~~~g~~~~~dgg 249 (252)
T PRK07035 227 AVLYLASDASSYTTGECLNVDGG 249 (252)
T ss_pred HHHHHhCccccCccCCEEEeCCC
Confidence 9999887653 3778877654
|
|
| >PRK06196 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.62 E-value=1.1e-14 Score=131.54 Aligned_cols=207 Identities=14% Similarity=0.040 Sum_probs=129.1
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhh--CCceEEEccCChhhH--Hhh-------ccCcee
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQ--SGFDVHLFNANETAL--MIL-------TTLKNY 124 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~--~~~~~~~~D~~~~~~--~~~-------~~~d~v 124 (364)
..+++||||| +|+||++++++|+++|++|++++|+.++...... .++.++.+|++|.+. ..+ ..+|++
T Consensus 24 l~~k~vlITGasggIG~~~a~~L~~~G~~Vv~~~R~~~~~~~~~~~l~~v~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~l 103 (315)
T PRK06196 24 LSGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAREALAGIDGVEVVMLDLADLESVRAFAERFLDSGRRIDIL 103 (315)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhhCeEEEccCCCHHHHHHHHHHHHhcCCCCCEE
Confidence 3458999999 9999999999999999999999998766544321 247889999999663 211 358999
Q ss_pred eEEEEecCCCCCC--CChhhhHHH----------HHHHHhhcCCccEEEEEccceeecCCCC-ccccCCCCCCCCChhHH
Q 017914 125 THLLVSIPPLEGT--GDPMLKHGE----------LLRSTLMNGHLQWLGYLSSTGVYGHSGG-AWVDEDYPANPTTELGR 191 (364)
Q Consensus 125 ~~~~~~~~~~~~~--~~~~~~~~~----------~l~~a~~~~~~~r~v~~Ss~~vy~~~~~-~~~~E~~~~~~~~~Y~~ 191 (364)
+|+++........ .+....... .++..+++.+..++|++||.+....... ...+...+..+...|+.
T Consensus 104 i~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~~~~~~~~Y~~ 183 (315)
T PRK06196 104 INNAGVMACPETRVGDGWEAQFATNHLGHFALVNLLWPALAAGAGARVVALSSAGHRRSPIRWDDPHFTRGYDKWLAYGQ 183 (315)
T ss_pred EECCCCCCCCCccCCccHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEECCHHhccCCCCccccCccCCCChHHHHHH
Confidence 9999764322111 111112222 2333344555579999998753321110 00111223345568999
Q ss_pred HHHHHHHHHHHhhhh---cCCcEEEEEecceecCCCChHHH--HHHhcCccc-ccccccCCcccccccHHHHHHHHHHHc
Q 017914 192 LRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRSSVDT--IIKQLPLSE-GQKMRRARQYTSRIHVDDICQVLSASI 265 (364)
Q Consensus 192 sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~--~~~~~~~~~-~~~~~~~~~~~~~i~v~Dva~~~~~~l 265 (364)
+|.+.+.+.+.+++. .|+++++++||.+.++....+.. ......+.. ...+. ..+...+|+|..++.++
T Consensus 184 SK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~a~~~~~l~ 258 (315)
T PRK06196 184 SKTANALFAVHLDKLGKDQGVRAFSVHPGGILTPLQRHLPREEQVALGWVDEHGNPID-----PGFKTPAQGAATQVWAA 258 (315)
T ss_pred HHHHHHHHHHHHHHHhcCCCcEEEEeeCCcccCCccccCChhhhhhhhhhhhhhhhhh-----hhcCCHhHHHHHHHHHh
Confidence 999999998877643 48999999999998874321110 000000000 00000 02356899999999988
Q ss_pred cCC
Q 017914 266 DKP 268 (364)
Q Consensus 266 ~~~ 268 (364)
..+
T Consensus 259 ~~~ 261 (315)
T PRK06196 259 TSP 261 (315)
T ss_pred cCC
Confidence 754
|
|
| >PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.62 E-value=2.2e-14 Score=125.41 Aligned_cols=203 Identities=9% Similarity=0.021 Sum_probs=128.1
Q ss_pred CCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeC-chhhhhhhh---CCceEEEccCChhhH--Hhh-------cc-Cc
Q 017914 58 SPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTN-VMKKKELEQ---SGFDVHLFNANETAL--MIL-------TT-LK 122 (364)
Q Consensus 58 ~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~-~~~~~~l~~---~~~~~~~~D~~~~~~--~~~-------~~-~d 122 (364)
++++||||| +|+||+++++.|+++|++|++..++ .+....+.. .++.++.+|++|++. ..+ .. +|
T Consensus 4 ~~k~ilItGas~gIG~~la~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~id 83 (253)
T PRK08642 4 SEQTVLVTGGSRGLGAAIARAFAREGARVVVNYHQSEDAAEALADELGDRAIALQADVTDREQVQAMFATATEHFGKPIT 83 (253)
T ss_pred CCCEEEEeCCCCcHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHhCCCCe
Confidence 357899999 9999999999999999999887653 333332221 357788999998663 222 22 89
Q ss_pred eeeEEEEecCCC-----CCCCC-----hhhhHH------HHHHHHh----hcCCccEEEEEccceeecCCCCccccCCCC
Q 017914 123 NYTHLLVSIPPL-----EGTGD-----PMLKHG------ELLRSTL----MNGHLQWLGYLSSTGVYGHSGGAWVDEDYP 182 (364)
Q Consensus 123 ~v~~~~~~~~~~-----~~~~~-----~~~~~~------~~l~~a~----~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~ 182 (364)
+++|+++..... ....+ ...... .++..++ ...+..++|++||.... .+
T Consensus 84 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~-----------~~ 152 (253)
T PRK08642 84 TVVNNALADFSFDGDARKKADDITWEDFQQQLEGSVKGALNTIQAALPGMREQGFGRIINIGTNLFQ-----------NP 152 (253)
T ss_pred EEEECCCccccccccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHhcCCeEEEEECCcccc-----------CC
Confidence 999998642110 00110 001111 2233332 23445689999885322 12
Q ss_pred CCCCChhHHHHHHHHHHHHHhhhh---cCCcEEEEEecceecCCCC-h-HHHHHHhcCcccccccccCCcccccccHHHH
Q 017914 183 ANPTTELGRLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRS-S-VDTIIKQLPLSEGQKMRRARQYTSRIHVDDI 257 (364)
Q Consensus 183 ~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dv 257 (364)
..+...|+.+|.+.|.+++.++++ .+++++.|+||.+..+... . ....... +.. ......+.+.+|+
T Consensus 153 ~~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~--~~~------~~~~~~~~~~~~v 224 (253)
T PRK08642 153 VVPYHDYTTAKAALLGLTRNLAAELGPYGITVNMVSGGLLRTTDASAATPDEVFDL--IAA------TTPLRKVTTPQEF 224 (253)
T ss_pred CCCccchHHHHHHHHHHHHHHHHHhCccCeEEEEEeecccCCchhhccCCHHHHHH--HHh------cCCcCCCCCHHHH
Confidence 234568999999999999998765 4799999999988654211 0 0111110 000 0011336889999
Q ss_pred HHHHHHHccCCC---CCceEEEeCC
Q 017914 258 CQVLSASIDKPS---AWNVYNVVDD 279 (364)
Q Consensus 258 a~~~~~~l~~~~---~g~~~~i~~~ 279 (364)
|++++.++.... .|+.+.+.+|
T Consensus 225 a~~~~~l~~~~~~~~~G~~~~vdgg 249 (253)
T PRK08642 225 ADAVLFFASPWARAVTGQNLVVDGG 249 (253)
T ss_pred HHHHHHHcCchhcCccCCEEEeCCC
Confidence 999999997542 3888887765
|
|
| >PRK07097 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.62 E-value=3.7e-14 Score=124.95 Aligned_cols=212 Identities=9% Similarity=-0.063 Sum_probs=133.9
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhh----h--CCceEEEccCChhhH--Hhh-------cc
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELE----Q--SGFDVHLFNANETAL--MIL-------TT 120 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~----~--~~~~~~~~D~~~~~~--~~~-------~~ 120 (364)
..++++|||| +|.||++++++|+++|++|+++.|+.++...+. . .++.++.+|++|.+. ..+ ..
T Consensus 8 ~~~k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 87 (265)
T PRK07097 8 LKGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYRELGIEAHGYVCDVTDEDGVQAMVSQIEKEVGV 87 (265)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCCC
Confidence 3457899999 999999999999999999999999876543321 1 247789999999663 222 34
Q ss_pred CceeeEEEEecCCCCCCCChhh----hHHHH----------HHHHhhcCCccEEEEEccce-eecCCCCccccCCCCCCC
Q 017914 121 LKNYTHLLVSIPPLEGTGDPML----KHGEL----------LRSTLMNGHLQWLGYLSSTG-VYGHSGGAWVDEDYPANP 185 (364)
Q Consensus 121 ~d~v~~~~~~~~~~~~~~~~~~----~~~~~----------l~~a~~~~~~~r~v~~Ss~~-vy~~~~~~~~~E~~~~~~ 185 (364)
+|+++|+++............. ....| ++..++..+..++|++||.. .++. .+
T Consensus 88 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~------------~~ 155 (265)
T PRK07097 88 IDILVNNAGIIKRIPMLEMSAEDFRQVIDIDLNAPFIVSKAVIPSMIKKGHGKIINICSMMSELGR------------ET 155 (265)
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCcEEEEEcCccccCCC------------CC
Confidence 7999999986543221111111 11222 22233344567899998853 2221 13
Q ss_pred CChhHHHHHHHHHHHHHhhhhc---CCcEEEEEecceecCCCChHHHHH-HhcCcccccccccCCcccccccHHHHHHHH
Q 017914 186 TTELGRLRLSAEKGWLNLGRDL---GISAQVFRLGGIYGPGRSSVDTII-KQLPLSEGQKMRRARQYTSRIHVDDICQVL 261 (364)
Q Consensus 186 ~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilRp~~v~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~ 261 (364)
...|+.+|...+.+++.++++. |++++.|+||.+..+......... ...................+...+|+|..+
T Consensus 156 ~~~Y~~sKaal~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~ 235 (265)
T PRK07097 156 VSAYAAAKGGLKMLTKNIASEYGEANIQCNGIGPGYIATPQTAPLRELQADGSRHPFDQFIIAKTPAARWGDPEDLAGPA 235 (265)
T ss_pred CccHHHHHHHHHHHHHHHHHHhhhcCceEEEEEeccccccchhhhhhccccccchhHHHHHHhcCCccCCcCHHHHHHHH
Confidence 4679999999999999987653 899999999999876422111000 000000000000000012246789999999
Q ss_pred HHHccCCC---CCceEEEeCCC
Q 017914 262 SASIDKPS---AWNVYNVVDDD 280 (364)
Q Consensus 262 ~~~l~~~~---~g~~~~i~~~~ 280 (364)
+.++.... .|+.+.+.++.
T Consensus 236 ~~l~~~~~~~~~g~~~~~~gg~ 257 (265)
T PRK07097 236 VFLASDASNFVNGHILYVDGGI 257 (265)
T ss_pred HHHhCcccCCCCCCEEEECCCc
Confidence 99998642 37777776653
|
|
| >PRK08589 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.62 E-value=3.3e-14 Score=125.68 Aligned_cols=207 Identities=11% Similarity=-0.029 Sum_probs=130.0
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhh----hh--CCceEEEccCChhhH--Hh-------hcc
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKEL----EQ--SGFDVHLFNANETAL--MI-------LTT 120 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l----~~--~~~~~~~~D~~~~~~--~~-------~~~ 120 (364)
..++++|||| +|+||+++++.|+++|++|++++|+ +....+ .. .++.++.+|+++.+. .. +..
T Consensus 4 l~~k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~ 82 (272)
T PRK08589 4 LENKVAVITGASTGIGQASAIALAQEGAYVLAVDIA-EAVSETVDKIKSNGGKAKAYHVDISDEQQVKDFASEIKEQFGR 82 (272)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCc-HHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHHHcCC
Confidence 3468999999 9999999999999999999999998 443322 11 247789999999753 21 235
Q ss_pred CceeeEEEEecCCCCCC-CChhhh----HHHH----------HHHHhhcCCccEEEEEccceeecCCCCccccCCCCCCC
Q 017914 121 LKNYTHLLVSIPPLEGT-GDPMLK----HGEL----------LRSTLMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANP 185 (364)
Q Consensus 121 ~d~v~~~~~~~~~~~~~-~~~~~~----~~~~----------l~~a~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~ 185 (364)
+|.++|+++........ ..+... ...| ++..+++.+ .++|++||...+... ..
T Consensus 83 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~-----------~~ 150 (272)
T PRK08589 83 VDVLFNNAGVDNAAGRIHEYPVDVFDKIMAVDMRGTFLMTKMLLPLMMEQG-GSIINTSSFSGQAAD-----------LY 150 (272)
T ss_pred cCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CEEEEeCchhhcCCC-----------CC
Confidence 79999998764322111 111111 1122 223333444 689999987544221 12
Q ss_pred CChhHHHHHHHHHHHHHhhhh---cCCcEEEEEecceecCCCChHH-----HHHHhcCcccccccccCCcccccccHHHH
Q 017914 186 TTELGRLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRSSVD-----TIIKQLPLSEGQKMRRARQYTSRIHVDDI 257 (364)
Q Consensus 186 ~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~i~v~Dv 257 (364)
...|+.+|...+.+++.++.+ .|++++.+.||.+..+...... .+... +........ ...-+...+|+
T Consensus 151 ~~~Y~asKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~--~~~~~~~~~--~~~~~~~~~~v 226 (272)
T PRK08589 151 RSGYNAAKGAVINFTKSIAIEYGRDGIRANAIAPGTIETPLVDKLTGTSEDEAGKT--FRENQKWMT--PLGRLGKPEEV 226 (272)
T ss_pred CchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCchhhhhcccchhhHHHH--HhhhhhccC--CCCCCcCHHHH
Confidence 357999999999999998754 4799999999998765321100 00000 000000000 01124678999
Q ss_pred HHHHHHHccCCC---CCceEEEeCCC
Q 017914 258 CQVLSASIDKPS---AWNVYNVVDDD 280 (364)
Q Consensus 258 a~~~~~~l~~~~---~g~~~~i~~~~ 280 (364)
|++++.++.... .|+.+.+.++.
T Consensus 227 a~~~~~l~s~~~~~~~G~~i~vdgg~ 252 (272)
T PRK08589 227 AKLVVFLASDDSSFITGETIRIDGGV 252 (272)
T ss_pred HHHHHHHcCchhcCcCCCEEEECCCc
Confidence 999999987542 37788776663
|
|
| >PRK06057 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.62 E-value=3.2e-14 Score=124.56 Aligned_cols=205 Identities=11% Similarity=-0.002 Sum_probs=128.7
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhh-hCCceEEEccCChhhH--Hhh-------ccCceee
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELE-QSGFDVHLFNANETAL--MIL-------TTLKNYT 125 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~-~~~~~~~~~D~~~~~~--~~~-------~~~d~v~ 125 (364)
..+++||||| +|+||.+++++|+++|++|++++|+......+. ..+..++.+|+++.+. ..+ ..+|.++
T Consensus 5 ~~~~~vlItGasggIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi 84 (255)
T PRK06057 5 LAGRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAADEVGGLFVPTDVTDEDAVNALFDTAAETYGSVDIAF 84 (255)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCcEEEeeCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 3468999999 999999999999999999999999876544332 2234688899999663 222 3579999
Q ss_pred EEEEecCCCCC-CC-C----hhhhHHHH----------HHHHhhcCCccEEEEEccc-eeecCCCCccccCCCCCCCCCh
Q 017914 126 HLLVSIPPLEG-TG-D----PMLKHGEL----------LRSTLMNGHLQWLGYLSST-GVYGHSGGAWVDEDYPANPTTE 188 (364)
Q Consensus 126 ~~~~~~~~~~~-~~-~----~~~~~~~~----------l~~a~~~~~~~r~v~~Ss~-~vy~~~~~~~~~E~~~~~~~~~ 188 (364)
|+++....... .. . .......| ++..++..+..++|++||. ++++... +...
T Consensus 85 ~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~~sS~~~~~g~~~-----------~~~~ 153 (255)
T PRK06057 85 NNAGISPPEDDSILNTGLDAWQRVQDVNLTSVYLCCKAALPHMVRQGKGSIINTASFVAVMGSAT-----------SQIS 153 (255)
T ss_pred ECCCcCCCCCCCcccCCHHHHHHHHHHhcHHHHHHHHHHHHHHHHhCCcEEEEEcchhhccCCCC-----------CCcc
Confidence 99876432111 11 1 11111222 2222333445689999874 4454321 2346
Q ss_pred hHHHHHHHHHHHHHhhh---hcCCcEEEEEecceecCCCCh-HHH-HHH-hcCcccccccccCCcccccccHHHHHHHHH
Q 017914 189 LGRLRLSAEKGWLNLGR---DLGISAQVFRLGGIYGPGRSS-VDT-IIK-QLPLSEGQKMRRARQYTSRIHVDDICQVLS 262 (364)
Q Consensus 189 Y~~sK~~~E~~~~~~~~---~~~~~~~ilRp~~v~g~~~~~-~~~-~~~-~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~ 262 (364)
|+.+|.+.+.+.+.++. ..|+++++++||.+.++.... +.. ... ...+. .. ....+..++|+|+++.
T Consensus 154 Y~~sKaal~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~---~~----~~~~~~~~~~~a~~~~ 226 (255)
T PRK06057 154 YTASKGGVLAMSRELGVQFARQGIRVNALCPGPVNTPLLQELFAKDPERAARRLV---HV----PMGRFAEPEEIAAAVA 226 (255)
T ss_pred hHHHHHHHHHHHHHHHHHHHhhCcEEEEEeeCCcCCchhhhhccCCHHHHHHHHh---cC----CCCCCcCHHHHHHHHH
Confidence 99999888887776543 348999999999998764211 000 000 00000 00 0124688999999998
Q ss_pred HHccCCC---CCceEEEeCC
Q 017914 263 ASIDKPS---AWNVYNVVDD 279 (364)
Q Consensus 263 ~~l~~~~---~g~~~~i~~~ 279 (364)
.++.... .|+.+.+.++
T Consensus 227 ~l~~~~~~~~~g~~~~~~~g 246 (255)
T PRK06057 227 FLASDDASFITASTFLVDGG 246 (255)
T ss_pred HHhCccccCccCcEEEECCC
Confidence 8886542 2777777654
|
|
| >PRK05867 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.61 E-value=8.4e-14 Score=121.79 Aligned_cols=207 Identities=8% Similarity=-0.080 Sum_probs=130.3
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhh------CCceEEEccCChhhH--Hh-------hcc
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQ------SGFDVHLFNANETAL--MI-------LTT 120 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~------~~~~~~~~D~~~~~~--~~-------~~~ 120 (364)
..++++|||| +|.||++++++|+++|++|++++|+.++.+.+.. .++..+.+|++|.+. .. +..
T Consensus 7 ~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 86 (253)
T PRK05867 7 LHGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTSGGKVVPVCCDVSQHQQVTSMLDQVTAELGG 86 (253)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 3468999999 8999999999999999999999998766544321 346788999999663 22 246
Q ss_pred CceeeEEEEecCCCCCCCChhhhH----HHH------HHHH----hhcCC-ccEEEEEccceeecCCCCccccCCCCCCC
Q 017914 121 LKNYTHLLVSIPPLEGTGDPMLKH----GEL------LRST----LMNGH-LQWLGYLSSTGVYGHSGGAWVDEDYPANP 185 (364)
Q Consensus 121 ~d~v~~~~~~~~~~~~~~~~~~~~----~~~------l~~a----~~~~~-~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~ 185 (364)
+|+++|+++..............+ ..| +..+ +.+.+ ..++|++||....- ... ...
T Consensus 87 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~--~~~-------~~~ 157 (253)
T PRK05867 87 IDIAVCNAGIITVTPMLDMPLEEFQRLQNTNVTGVFLTAQAAAKAMVKQGQGGVIINTASMSGHI--INV-------PQQ 157 (253)
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCcEEEEECcHHhcC--CCC-------CCC
Confidence 899999987543321111111111 112 2222 22222 24799998754210 000 012
Q ss_pred CChhHHHHHHHHHHHHHhhhh---cCCcEEEEEecceecCCCChHHHHHHhcCcccccccccCCcccccccHHHHHHHHH
Q 017914 186 TTELGRLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRSSVDTIIKQLPLSEGQKMRRARQYTSRIHVDDICQVLS 262 (364)
Q Consensus 186 ~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~ 262 (364)
...|+.+|.+.+.+.+.++.+ .|++++.++||.+-.+........... +..... ...+...+|+|++++
T Consensus 158 ~~~Y~asKaal~~~~~~la~e~~~~gI~vn~i~PG~v~t~~~~~~~~~~~~--~~~~~~------~~r~~~p~~va~~~~ 229 (253)
T PRK05867 158 VSHYCASKAAVIHLTKAMAVELAPHKIRVNSVSPGYILTELVEPYTEYQPL--WEPKIP------LGRLGRPEELAGLYL 229 (253)
T ss_pred ccchHHHHHHHHHHHHHHHHHHhHhCeEEEEeecCCCCCcccccchHHHHH--HHhcCC------CCCCcCHHHHHHHHH
Confidence 357999999999999998754 489999999999866532211111111 000000 112467899999999
Q ss_pred HHccCCC---CCceEEEeCCC
Q 017914 263 ASIDKPS---AWNVYNVVDDD 280 (364)
Q Consensus 263 ~~l~~~~---~g~~~~i~~~~ 280 (364)
.++.... .|+++.+.+|.
T Consensus 230 ~L~s~~~~~~tG~~i~vdgG~ 250 (253)
T PRK05867 230 YLASEASSYMTGSDIVIDGGY 250 (253)
T ss_pred HHcCcccCCcCCCeEEECCCc
Confidence 9997643 37888887663
|
|
| >PRK08267 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.61 E-value=2.7e-14 Score=125.45 Aligned_cols=188 Identities=13% Similarity=0.024 Sum_probs=122.3
Q ss_pred CCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhh----CCceEEEccCChhhH--Hh--------hccCce
Q 017914 59 PNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQ----SGFDVHLFNANETAL--MI--------LTTLKN 123 (364)
Q Consensus 59 ~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~----~~~~~~~~D~~~~~~--~~--------~~~~d~ 123 (364)
|+++|||| +|+||++++++|+++|++|++++|+.+....+.. ..+.++.+|++|.+. .. ...+|.
T Consensus 1 mk~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~~id~ 80 (260)
T PRK08267 1 MKSIFITGAASGIGRATALLFAAEGWRVGAYDINEAGLAALAAELGAGNAWTGALDVTDRAAWDAALADFAAATGGRLDV 80 (260)
T ss_pred CcEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCCE
Confidence 47899999 9999999999999999999999998876554432 357899999999663 22 235699
Q ss_pred eeEEEEecCCCCCCC----ChhhhHHHH------HHHH----hhcCCccEEEEEccce-eecCCCCccccCCCCCCCCCh
Q 017914 124 YTHLLVSIPPLEGTG----DPMLKHGEL------LRST----LMNGHLQWLGYLSSTG-VYGHSGGAWVDEDYPANPTTE 188 (364)
Q Consensus 124 v~~~~~~~~~~~~~~----~~~~~~~~~------l~~a----~~~~~~~r~v~~Ss~~-vy~~~~~~~~~E~~~~~~~~~ 188 (364)
|+|+++......... +.......| +..+ ++..+..++|++||.. +++.. ....
T Consensus 81 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~------------~~~~ 148 (260)
T PRK08267 81 LFNNAGILRGGPFEDIPLEAHDRVIDINVKGVLNGAHAALPYLKATPGARVINTSSASAIYGQP------------GLAV 148 (260)
T ss_pred EEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEeCchhhCcCCC------------Cchh
Confidence 999997644321111 111111122 2222 2344557899998864 33321 2357
Q ss_pred hHHHHHHHHHHHHHhhh---hcCCcEEEEEecceecCCCCh-HHHHHHhcCcccccccccCCcccccccHHHHHHHHHHH
Q 017914 189 LGRLRLSAEKGWLNLGR---DLGISAQVFRLGGIYGPGRSS-VDTIIKQLPLSEGQKMRRARQYTSRIHVDDICQVLSAS 264 (364)
Q Consensus 189 Y~~sK~~~E~~~~~~~~---~~~~~~~ilRp~~v~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~ 264 (364)
|+.+|...+.+.+.++. ..++++++++||.+....... ....... .. ....-.+..+|+|++++.+
T Consensus 149 Y~~sKaa~~~~~~~l~~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~-~~---------~~~~~~~~~~~va~~~~~~ 218 (260)
T PRK08267 149 YSATKFAVRGLTEALDLEWRRHGIRVADVMPLFVDTAMLDGTSNEVDAG-ST---------KRLGVRLTPEDVAEAVWAA 218 (260)
T ss_pred hHHHHHHHHHHHHHHHHHhcccCcEEEEEecCCcCCcccccccchhhhh-hH---------hhccCCCCHHHHHHHHHHH
Confidence 99999999999888764 347999999999886543111 0000000 00 0011126679999999999
Q ss_pred ccCC
Q 017914 265 IDKP 268 (364)
Q Consensus 265 l~~~ 268 (364)
++..
T Consensus 219 ~~~~ 222 (260)
T PRK08267 219 VQHP 222 (260)
T ss_pred HhCC
Confidence 9754
|
|
| >PRK12938 acetyacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.61 E-value=9.5e-14 Score=120.91 Aligned_cols=202 Identities=10% Similarity=0.068 Sum_probs=126.4
Q ss_pred CCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEe-Cchhhh----hhhh--CCceEEEccCChhhH--Hh-------hccC
Q 017914 59 PNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCT-NVMKKK----ELEQ--SGFDVHLFNANETAL--MI-------LTTL 121 (364)
Q Consensus 59 ~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r-~~~~~~----~l~~--~~~~~~~~D~~~~~~--~~-------~~~~ 121 (364)
++.+|||| +|+||++++++|+++|++|++..+ +..... .+.. ..+..+.+|++|.+. .. +..+
T Consensus 3 ~k~~lVtG~s~giG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 82 (246)
T PRK12938 3 QRIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVGDWDSTKAAFDKVKAEVGEI 82 (246)
T ss_pred CCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCCC
Confidence 47899999 999999999999999999988654 322221 1111 235677899999653 22 2468
Q ss_pred ceeeEEEEecCCCCCCC----ChhhhHH----------HHHHHHhhcCCccEEEEEccceeecCCCCccccCCCCCCCCC
Q 017914 122 KNYTHLLVSIPPLEGTG----DPMLKHG----------ELLRSTLMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANPTT 187 (364)
Q Consensus 122 d~v~~~~~~~~~~~~~~----~~~~~~~----------~~l~~a~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~ 187 (364)
|+++|+++......... +...... ..+...+.+.+.+++|++||...... .....
T Consensus 83 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~-----------~~~~~ 151 (246)
T PRK12938 83 DVLVNNAGITRDVVFRKMTREDWTAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQKG-----------QFGQT 151 (246)
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEechhccCC-----------CCCCh
Confidence 99999987643211111 1111111 22333344566779999998643211 11346
Q ss_pred hhHHHHHHHHHHHHHhhhh---cCCcEEEEEecceecCCCChH-HHHHHhcCcccccccccCCcccccccHHHHHHHHHH
Q 017914 188 ELGRLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRSSV-DTIIKQLPLSEGQKMRRARQYTSRIHVDDICQVLSA 263 (364)
Q Consensus 188 ~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~ 263 (364)
.|+.+|.+.+.+.+.++++ .++++++++||.+.++....+ ...... +. .......+...+|++++++.
T Consensus 152 ~y~~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~--~~------~~~~~~~~~~~~~v~~~~~~ 223 (246)
T PRK12938 152 NYSTAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVKAIRPDVLEK--IV------ATIPVRRLGSPDEIGSIVAW 223 (246)
T ss_pred hHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEecccCCchhhhcChHHHHH--HH------hcCCccCCcCHHHHHHHHHH
Confidence 7999999999988877643 479999999999877642111 111111 00 00011234678999999998
Q ss_pred HccCC---CCCceEEEeCC
Q 017914 264 SIDKP---SAWNVYNVVDD 279 (364)
Q Consensus 264 ~l~~~---~~g~~~~i~~~ 279 (364)
++... ..|+.+.+.++
T Consensus 224 l~~~~~~~~~g~~~~~~~g 242 (246)
T PRK12938 224 LASEESGFSTGADFSLNGG 242 (246)
T ss_pred HcCcccCCccCcEEEECCc
Confidence 88764 23788887665
|
|
| >PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.61 E-value=7.7e-14 Score=122.19 Aligned_cols=205 Identities=12% Similarity=-0.000 Sum_probs=132.8
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhh----h--CCceEEEccCChhhH--Hh-------hcc
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELE----Q--SGFDVHLFNANETAL--MI-------LTT 120 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~----~--~~~~~~~~D~~~~~~--~~-------~~~ 120 (364)
..+++||||| +|+||++++++|.++|++|++++|+.+..+.+. . .++.++.+|++|.+. .. +..
T Consensus 9 l~~k~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~ 88 (255)
T PRK06113 9 LDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFALSKLGK 88 (255)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 4468999999 999999999999999999999999766543321 1 246788999999763 22 235
Q ss_pred CceeeEEEEecCCCCCCCChhh----hHHHH------HHHHhh----cCCccEEEEEccceeecCCCCccccCCCCCCCC
Q 017914 121 LKNYTHLLVSIPPLEGTGDPML----KHGEL------LRSTLM----NGHLQWLGYLSSTGVYGHSGGAWVDEDYPANPT 186 (364)
Q Consensus 121 ~d~v~~~~~~~~~~~~~~~~~~----~~~~~------l~~a~~----~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~ 186 (364)
+|+++|+++...... ...... ....| +..++. +.+..++|++||..... +..+.
T Consensus 89 ~d~li~~ag~~~~~~-~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~-----------~~~~~ 156 (255)
T PRK06113 89 VDILVNNAGGGGPKP-FDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAEN-----------KNINM 156 (255)
T ss_pred CCEEEECCCCCCCCC-CCCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCcEEEEEecccccC-----------CCCCc
Confidence 799999987644321 111111 12222 233322 33445899999865331 11234
Q ss_pred ChhHHHHHHHHHHHHHhhhh---cCCcEEEEEecceecCCCC-h-HHHHHHhcCcccccccccCCcccccccHHHHHHHH
Q 017914 187 TELGRLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRS-S-VDTIIKQLPLSEGQKMRRARQYTSRIHVDDICQVL 261 (364)
Q Consensus 187 ~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~ 261 (364)
..|+.+|.+.+.+++.++.+ .+++++++.||.+..+... . ...+... ... ......+...+|+++++
T Consensus 157 ~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~--~~~------~~~~~~~~~~~d~a~~~ 228 (255)
T PRK06113 157 TSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVITPEIEQK--MLQ------HTPIRRLGQPQDIANAA 228 (255)
T ss_pred chhHHHHHHHHHHHHHHHHHhhhhCeEEEEEecccccccccccccCHHHHHH--HHh------cCCCCCCcCHHHHHHHH
Confidence 57999999999999988753 4799999999988654311 1 0111110 000 00112246789999999
Q ss_pred HHHccCCC---CCceEEEeCCCC
Q 017914 262 SASIDKPS---AWNVYNVVDDDP 281 (364)
Q Consensus 262 ~~~l~~~~---~g~~~~i~~~~~ 281 (364)
+.++.... .|+++++.++..
T Consensus 229 ~~l~~~~~~~~~G~~i~~~gg~~ 251 (255)
T PRK06113 229 LFLCSPAASWVSGQILTVSGGGV 251 (255)
T ss_pred HHHcCccccCccCCEEEECCCcc
Confidence 99997542 388999888753
|
|
| >PRK05866 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.61 E-value=3.3e-14 Score=126.84 Aligned_cols=186 Identities=8% Similarity=-0.007 Sum_probs=123.7
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhh------CCceEEEccCChhhH--Hhh-------cc
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQ------SGFDVHLFNANETAL--MIL-------TT 120 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~------~~~~~~~~D~~~~~~--~~~-------~~ 120 (364)
..+++||||| +|+||+++++.|+++|++|++++|+.+..+.+.+ ..+.++.+|++|.+. ..+ ..
T Consensus 38 ~~~k~vlItGasggIG~~la~~La~~G~~Vi~~~R~~~~l~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~ 117 (293)
T PRK05866 38 LTGKRILLTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVADRITRAGGDAMAVPCDLSDLDAVDALVADVEKRIGG 117 (293)
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 4458999999 9999999999999999999999998766544321 246788999999764 222 36
Q ss_pred CceeeEEEEecCCCCCCC------ChhhhHHHHH----------HHHhhcCCccEEEEEccceeecCCCCccccCCCCCC
Q 017914 121 LKNYTHLLVSIPPLEGTG------DPMLKHGELL----------RSTLMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPAN 184 (364)
Q Consensus 121 ~d~v~~~~~~~~~~~~~~------~~~~~~~~~l----------~~a~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~ 184 (364)
+|.++|+++......... +.......|+ +..++..+..++|++||.+++.... .
T Consensus 118 id~li~~AG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~----------p 187 (293)
T PRK05866 118 VDILINNAGRSIRRPLAESLDRWHDVERTMVLNYYAPLRLIRGLAPGMLERGDGHIINVATWGVLSEAS----------P 187 (293)
T ss_pred CCEEEECCCCCCCcchhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhcCCCC----------C
Confidence 899999987543221111 1111122232 2223355667999999976543110 1
Q ss_pred CCChhHHHHHHHHHHHHHhhhh---cCCcEEEEEecceecCCCChHHHHHHhcCcccccccccCCcccccccHHHHHHHH
Q 017914 185 PTTELGRLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRSSVDTIIKQLPLSEGQKMRRARQYTSRIHVDDICQVL 261 (364)
Q Consensus 185 ~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~ 261 (364)
....|+.+|.+.+.+++.++.+ .++++++++||.+-.+.... .... .+ ...+..+++|+.+
T Consensus 188 ~~~~Y~asKaal~~l~~~la~e~~~~gI~v~~v~pg~v~T~~~~~---------~~~~----~~---~~~~~pe~vA~~~ 251 (293)
T PRK05866 188 LFSVYNASKAALSAVSRVIETEWGDRGVHSTTLYYPLVATPMIAP---------TKAY----DG---LPALTADEAAEWM 251 (293)
T ss_pred CcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEEcCcccCccccc---------cccc----cC---CCCCCHHHHHHHH
Confidence 2357999999999988887543 48999999999775442110 0000 00 1236799999999
Q ss_pred HHHccCC
Q 017914 262 SASIDKP 268 (364)
Q Consensus 262 ~~~l~~~ 268 (364)
+.++++.
T Consensus 252 ~~~~~~~ 258 (293)
T PRK05866 252 VTAARTR 258 (293)
T ss_pred HHHHhcC
Confidence 9999864
|
|
| >PRK12742 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.61 E-value=9.5e-14 Score=120.17 Aligned_cols=205 Identities=10% Similarity=0.030 Sum_probs=127.3
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEe-Cchhhhhh-hhCCceEEEccCChhhH--Hhh---ccCceeeEEE
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCT-NVMKKKEL-EQSGFDVHLFNANETAL--MIL---TTLKNYTHLL 128 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r-~~~~~~~l-~~~~~~~~~~D~~~~~~--~~~---~~~d~v~~~~ 128 (364)
..+++||||| +|.||++++++|+++|++|+++.| +.+..+.+ ...++.++.+|++|.+. ..+ ..+|.++|++
T Consensus 4 ~~~k~vlItGasggIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~li~~a 83 (237)
T PRK12742 4 FTGKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAERLAQETGATAVQTDSADRDAVIDVVRKSGALDILVVNA 83 (237)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHhCCeEEecCCCCHHHHHHHHHHhCCCcEEEECC
Confidence 3468999999 999999999999999999988766 33433333 22356788899998653 222 4579999998
Q ss_pred EecCCCCCC----CChhhhHHHHHHHH-------hhc-CCccEEEEEccceeecCCCCccccCCCCCCCCChhHHHHHHH
Q 017914 129 VSIPPLEGT----GDPMLKHGELLRST-------LMN-GHLQWLGYLSSTGVYGHSGGAWVDEDYPANPTTELGRLRLSA 196 (364)
Q Consensus 129 ~~~~~~~~~----~~~~~~~~~~l~~a-------~~~-~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~~sK~~~ 196 (364)
+........ .+.......|+... +.. ....++|++||.... ..+..+...|+.+|.+.
T Consensus 84 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~----------~~~~~~~~~Y~~sKaa~ 153 (237)
T PRK12742 84 GIAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPEGGRIIIIGSVNGD----------RMPVAGMAAYAASKSAL 153 (237)
T ss_pred CCCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhcCCeEEEEeccccc----------cCCCCCCcchHHhHHHH
Confidence 754321111 11111222233221 111 123589999986421 11223456899999999
Q ss_pred HHHHHHhhhh---cCCcEEEEEecceecCCCChHHHHHHhcCcccccccccCCcccccccHHHHHHHHHHHccCCC---C
Q 017914 197 EKGWLNLGRD---LGISAQVFRLGGIYGPGRSSVDTIIKQLPLSEGQKMRRARQYTSRIHVDDICQVLSASIDKPS---A 270 (364)
Q Consensus 197 E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~---~ 270 (364)
|.+++.++.+ .|+++++|+||.+..+........... ...... ...+...+|+|+++..++.... .
T Consensus 154 ~~~~~~la~~~~~~gi~v~~v~Pg~~~t~~~~~~~~~~~~--~~~~~~------~~~~~~p~~~a~~~~~l~s~~~~~~~ 225 (237)
T PRK12742 154 QGMARGLARDFGPRGITINVVQPGPIDTDANPANGPMKDM--MHSFMA------IKRHGRPEEVAGMVAWLAGPEASFVT 225 (237)
T ss_pred HHHHHHHHHHHhhhCeEEEEEecCcccCCccccccHHHHH--HHhcCC------CCCCCCHHHHHHHHHHHcCcccCccc
Confidence 9999887654 479999999999876532110000000 000000 1123678999999999887643 3
Q ss_pred CceEEEeCC
Q 017914 271 WNVYNVVDD 279 (364)
Q Consensus 271 g~~~~i~~~ 279 (364)
|..+.+.+|
T Consensus 226 G~~~~~dgg 234 (237)
T PRK12742 226 GAMHTIDGA 234 (237)
T ss_pred CCEEEeCCC
Confidence 777777654
|
|
| >PRK06172 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.61 E-value=3.5e-14 Score=124.16 Aligned_cols=204 Identities=9% Similarity=-0.070 Sum_probs=132.6
Q ss_pred CCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhh----h--CCceEEEccCChhhH--Hhh-------ccC
Q 017914 58 SPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELE----Q--SGFDVHLFNANETAL--MIL-------TTL 121 (364)
Q Consensus 58 ~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~----~--~~~~~~~~D~~~~~~--~~~-------~~~ 121 (364)
.+++||||| +|+||++++++|+++|++|++++|+.++...+. . .++.++.+|+++.+. ..+ ..+
T Consensus 6 ~~k~ilItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~i 85 (253)
T PRK06172 6 SGKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIREAGGEALFVACDVTRDAEVKALVEQTIAAYGRL 85 (253)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHhCCC
Confidence 458999999 999999999999999999999999876543321 1 347788999999653 222 356
Q ss_pred ceeeEEEEecCCCCCC-----CChhhhHHHHHH----------HHhhcCCccEEEEEccceeecCCCCccccCCCCCCCC
Q 017914 122 KNYTHLLVSIPPLEGT-----GDPMLKHGELLR----------STLMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANPT 186 (364)
Q Consensus 122 d~v~~~~~~~~~~~~~-----~~~~~~~~~~l~----------~a~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~ 186 (364)
|+++|+++........ .+.......|+. ..+...+..++|++||...+.... ..
T Consensus 86 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~~~-----------~~ 154 (253)
T PRK06172 86 DYAFNNAGIEIEQGRLAEGSEAEFDAIMGVNVKGVWLCMKYQIPLMLAQGGGAIVNTASVAGLGAAP-----------KM 154 (253)
T ss_pred CEEEECCCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECchhhccCCC-----------CC
Confidence 9999998754322111 111111222222 222334456899999876553321 34
Q ss_pred ChhHHHHHHHHHHHHHhhhhc---CCcEEEEEecceecCCCChH----HHHHHhcCcccccccccCCcccccccHHHHHH
Q 017914 187 TELGRLRLSAEKGWLNLGRDL---GISAQVFRLGGIYGPGRSSV----DTIIKQLPLSEGQKMRRARQYTSRIHVDDICQ 259 (364)
Q Consensus 187 ~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilRp~~v~g~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~ 259 (364)
..|+.+|.+.+.+++.++.+. +++++++.||.+-.+..... ...... +... .....+...+|+++
T Consensus 155 ~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~--~~~~------~~~~~~~~p~~ia~ 226 (253)
T PRK06172 155 SIYAASKHAVIGLTKSAAIEYAKKGIRVNAVCPAVIDTDMFRRAYEADPRKAEF--AAAM------HPVGRIGKVEEVAS 226 (253)
T ss_pred chhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCCccChhhhhhcccChHHHHH--Hhcc------CCCCCccCHHHHHH
Confidence 679999999999998887553 79999999998855431111 000000 0000 00112367899999
Q ss_pred HHHHHccCC---CCCceEEEeCCC
Q 017914 260 VLSASIDKP---SAWNVYNVVDDD 280 (364)
Q Consensus 260 ~~~~~l~~~---~~g~~~~i~~~~ 280 (364)
.++.++... -.|+.+.+.+|.
T Consensus 227 ~~~~l~~~~~~~~~G~~i~~dgg~ 250 (253)
T PRK06172 227 AVLYLCSDGASFTTGHALMVDGGA 250 (253)
T ss_pred HHHHHhCccccCcCCcEEEECCCc
Confidence 999998764 248888887764
|
|
| >PRK12743 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.61 E-value=9.9e-14 Score=121.55 Aligned_cols=204 Identities=9% Similarity=-0.032 Sum_probs=127.5
Q ss_pred CCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCc-hhhhhh----hh--CCceEEEccCChhhH--Hhh-------cc
Q 017914 58 SPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNV-MKKKEL----EQ--SGFDVHLFNANETAL--MIL-------TT 120 (364)
Q Consensus 58 ~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~-~~~~~l----~~--~~~~~~~~D~~~~~~--~~~-------~~ 120 (364)
++++||||| +|+||++++++|+++|++|+++.|+. +....+ .. ..+.++.+|+++.+. ..+ ..
T Consensus 1 ~~k~vlItGas~giG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 80 (256)
T PRK12743 1 MAQVAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSDLPEGAQALDKLIQRLGR 80 (256)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 357899999 99999999999999999999886643 322222 11 347889999999663 222 35
Q ss_pred CceeeEEEEecCCCCCCCC----hhhhHHHH------HHHHhh----cC-CccEEEEEccceeecCCCCccccCCCCCCC
Q 017914 121 LKNYTHLLVSIPPLEGTGD----PMLKHGEL------LRSTLM----NG-HLQWLGYLSSTGVYGHSGGAWVDEDYPANP 185 (364)
Q Consensus 121 ~d~v~~~~~~~~~~~~~~~----~~~~~~~~------l~~a~~----~~-~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~ 185 (364)
+|.++|+++.......... .......| +..++. .. ..+++|++||.... .+..+
T Consensus 81 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~-----------~~~~~ 149 (256)
T PRK12743 81 IDVLVNNAGAMTKAPFLDMDFDEWRKIFTVDVDGAFLCSQIAARHMVKQGQGGRIINITSVHEH-----------TPLPG 149 (256)
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEEeecccc-----------CCCCC
Confidence 7999999876443211111 11111122 222221 22 23589999985421 22234
Q ss_pred CChhHHHHHHHHHHHHHhhhh---cCCcEEEEEecceecCCCChH-HHHHHhcCcccccccccCCcccccccHHHHHHHH
Q 017914 186 TTELGRLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRSSV-DTIIKQLPLSEGQKMRRARQYTSRIHVDDICQVL 261 (364)
Q Consensus 186 ~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~ 261 (364)
...|+.+|...+.+++.++.+ .+++++.|+||.+.++..... ...... ... ... ...+.+.+|+|+++
T Consensus 150 ~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~-~~~-~~~------~~~~~~~~dva~~~ 221 (256)
T PRK12743 150 ASAYTAAKHALGGLTKAMALELVEHGILVNAVAPGAIATPMNGMDDSDVKPD-SRP-GIP------LGRPGDTHEIASLV 221 (256)
T ss_pred cchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCccCccccccChHHHHH-HHh-cCC------CCCCCCHHHHHHHH
Confidence 568999999999998887653 479999999999987642211 111110 000 000 01135789999999
Q ss_pred HHHccCCC---CCceEEEeCCC
Q 017914 262 SASIDKPS---AWNVYNVVDDD 280 (364)
Q Consensus 262 ~~~l~~~~---~g~~~~i~~~~ 280 (364)
+.++.... .|+.+.+.++.
T Consensus 222 ~~l~~~~~~~~~G~~~~~dgg~ 243 (256)
T PRK12743 222 AWLCSEGASYTTGQSLIVDGGF 243 (256)
T ss_pred HHHhCccccCcCCcEEEECCCc
Confidence 88887542 37788877664
|
|
| >PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.61 E-value=5.4e-14 Score=121.55 Aligned_cols=201 Identities=9% Similarity=0.011 Sum_probs=130.0
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCChh-hH--HhhccCceeeEEEEecC
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANET-AL--MILTTLKNYTHLLVSIP 132 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~-~~--~~~~~~d~v~~~~~~~~ 132 (364)
.+++++|||| +|+||+++++.|+++|++|++++|+..... ..++.++.+|+++. +. +.+..+|.++|+++...
T Consensus 3 l~~k~~lVtGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~id~lv~~ag~~~ 79 (235)
T PRK06550 3 FMTKTVLITGAASGIGLAQARAFLAQGAQVYGVDKQDKPDL---SGNFHFLQLDLSDDLEPLFDWVPSVDILCNTAGILD 79 (235)
T ss_pred CCCCEEEEcCCCchHHHHHHHHHHHCCCEEEEEeCCccccc---CCcEEEEECChHHHHHHHHHhhCCCCEEEECCCCCC
Confidence 3457999999 999999999999999999999999754321 24578899999986 31 34457899999987532
Q ss_pred CCCCCC-----ChhhhHHHH------HHHHh----hcCCccEEEEEccceeecCCCCccccCCCCCCCCChhHHHHHHHH
Q 017914 133 PLEGTG-----DPMLKHGEL------LRSTL----MNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANPTTELGRLRLSAE 197 (364)
Q Consensus 133 ~~~~~~-----~~~~~~~~~------l~~a~----~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~~sK~~~E 197 (364)
...... +.......| +..++ .+.+.+++|++||...+... .....|+.+|...+
T Consensus 80 ~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~-----------~~~~~Y~~sK~a~~ 148 (235)
T PRK06550 80 DYKPLLDTSLEEWQHIFDTNLTSTFLLTRAYLPQMLERKSGIIINMCSIASFVAG-----------GGGAAYTASKHALA 148 (235)
T ss_pred CCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhccCC-----------CCCcccHHHHHHHH
Confidence 211111 111112222 22222 23445689999986543211 12357999999999
Q ss_pred HHHHHhhhhc---CCcEEEEEecceecCCCC--hH-HHHHHhcCcccccccccCCcccccccHHHHHHHHHHHccCCC--
Q 017914 198 KGWLNLGRDL---GISAQVFRLGGIYGPGRS--SV-DTIIKQLPLSEGQKMRRARQYTSRIHVDDICQVLSASIDKPS-- 269 (364)
Q Consensus 198 ~~~~~~~~~~---~~~~~ilRp~~v~g~~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~-- 269 (364)
.+.+.++.+. |+++++++||.+.++... +. ..+... ... ......+...+|+|++++.++....
T Consensus 149 ~~~~~la~~~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~--~~~------~~~~~~~~~~~~~a~~~~~l~s~~~~~ 220 (235)
T PRK06550 149 GFTKQLALDYAKDGIQVFGIAPGAVKTPMTAADFEPGGLADW--VAR------ETPIKRWAEPEEVAELTLFLASGKADY 220 (235)
T ss_pred HHHHHHHHHhhhcCeEEEEEeeCCccCcccccccCchHHHHH--Hhc------cCCcCCCCCHHHHHHHHHHHcChhhcc
Confidence 9888877543 899999999999776421 10 111110 000 0112235778999999999997542
Q ss_pred -CCceEEEeCC
Q 017914 270 -AWNVYNVVDD 279 (364)
Q Consensus 270 -~g~~~~i~~~ 279 (364)
.|+++.+.+|
T Consensus 221 ~~g~~~~~~gg 231 (235)
T PRK06550 221 MQGTIVPIDGG 231 (235)
T ss_pred CCCcEEEECCc
Confidence 3777777665
|
|
| >PRK08251 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.61 E-value=4.2e-14 Score=123.31 Aligned_cols=183 Identities=12% Similarity=0.027 Sum_probs=122.9
Q ss_pred CCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhh--------hCCceEEEccCChhhH--Hh-------hcc
Q 017914 59 PNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELE--------QSGFDVHLFNANETAL--MI-------LTT 120 (364)
Q Consensus 59 ~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~--------~~~~~~~~~D~~~~~~--~~-------~~~ 120 (364)
++++|||| +|+||++++++|+++|++|++++|++++.+.+. ...+.++.+|+++.+. .. +..
T Consensus 2 ~k~vlItGas~giG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 81 (248)
T PRK08251 2 RQKILITGASSGLGAGMAREFAAKGRDLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDHDQVFEVFAEFRDELGG 81 (248)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 57899999 999999999999999999999999876654432 1256788999999763 22 235
Q ss_pred CceeeEEEEecCCCCCCCCh----hhhHHHHHH----------HHhhcCCccEEEEEccceeecCCCCccccCCCCCCCC
Q 017914 121 LKNYTHLLVSIPPLEGTGDP----MLKHGELLR----------STLMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANPT 186 (364)
Q Consensus 121 ~d~v~~~~~~~~~~~~~~~~----~~~~~~~l~----------~a~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~ 186 (364)
+|+++|+++........... ......|+. ..+++.+.+++|++||........ .+.
T Consensus 82 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~----------~~~ 151 (248)
T PRK08251 82 LDRVIVNAGIGKGARLGTGKFWANKATAETNFVAALAQCEAAMEIFREQGSGHLVLISSVSAVRGLP----------GVK 151 (248)
T ss_pred CCEEEECCCcCCCCCcCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeccccccCCC----------CCc
Confidence 89999998754332211111 111222332 222345667899999864321111 123
Q ss_pred ChhHHHHHHHHHHHHHhhhh---cCCcEEEEEecceecCCCChHHHHHHhcCcccccccccCCcccccccHHHHHHHHHH
Q 017914 187 TELGRLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRSSVDTIIKQLPLSEGQKMRRARQYTSRIHVDDICQVLSA 263 (364)
Q Consensus 187 ~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~ 263 (364)
..|+.+|...+.+++.+..+ .++++++++||++.++... .. .. ....+..+|.|++++.
T Consensus 152 ~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~-------~~--~~---------~~~~~~~~~~a~~i~~ 213 (248)
T PRK08251 152 AAYAASKAGVASLGEGLRAELAKTPIKVSTIEPGYIRSEMNA-------KA--KS---------TPFMVDTETGVKALVK 213 (248)
T ss_pred ccHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcCcchhhh-------cc--cc---------CCccCCHHHHHHHHHH
Confidence 67999999999988877643 4789999999998654211 00 00 1124789999999999
Q ss_pred HccCCC
Q 017914 264 SIDKPS 269 (364)
Q Consensus 264 ~l~~~~ 269 (364)
++++..
T Consensus 214 ~~~~~~ 219 (248)
T PRK08251 214 AIEKEP 219 (248)
T ss_pred HHhcCC
Confidence 998653
|
|
| >PRK12937 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.60 E-value=1.5e-13 Score=119.54 Aligned_cols=204 Identities=12% Similarity=0.018 Sum_probs=126.7
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchh-hhh----hh--hCCceEEEccCChhhH--Hhh-------c
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMK-KKE----LE--QSGFDVHLFNANETAL--MIL-------T 119 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~-~~~----l~--~~~~~~~~~D~~~~~~--~~~-------~ 119 (364)
.++++||||| +|+||+++++.|.++|++|+++.|+... ... +. ..++.++.+|+++.+. ..+ .
T Consensus 3 ~~~~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 82 (245)
T PRK12937 3 LSNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAAGGRAIAVQADVADAAAVTRLFDAAETAFG 82 (245)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 3457999999 9999999999999999999888775432 111 11 1356788999999663 222 3
Q ss_pred cCceeeEEEEecCCCCCCCC----hhhhHHHH------HHHHhhc--CCccEEEEEccceeecCCCCccccCCCCCCCCC
Q 017914 120 TLKNYTHLLVSIPPLEGTGD----PMLKHGEL------LRSTLMN--GHLQWLGYLSSTGVYGHSGGAWVDEDYPANPTT 187 (364)
Q Consensus 120 ~~d~v~~~~~~~~~~~~~~~----~~~~~~~~------l~~a~~~--~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~ 187 (364)
.+|+++|+++.......... .......| +..++.. ....++|++||...+.. ..+..
T Consensus 83 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~-----------~~~~~ 151 (245)
T PRK12937 83 RIDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQGGRIINLSTSVIALP-----------LPGYG 151 (245)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhccCcEEEEEeeccccCC-----------CCCCc
Confidence 68999999876432111111 11111222 2222221 12358999988654321 12346
Q ss_pred hhHHHHHHHHHHHHHhhhh---cCCcEEEEEecceecCC--CChHHHHHHhcCcccccccccCCcccccccHHHHHHHHH
Q 017914 188 ELGRLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPG--RSSVDTIIKQLPLSEGQKMRRARQYTSRIHVDDICQVLS 262 (364)
Q Consensus 188 ~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~ 262 (364)
.|+.+|...+.+++.++.+ .++.+++++||.+-.+. .......... +.... ...-+.+++|+|++++
T Consensus 152 ~Y~~sK~a~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~--~~~~~------~~~~~~~~~d~a~~~~ 223 (245)
T PRK12937 152 PYAASKAAVEGLVHVLANELRGRGITVNAVAPGPVATELFFNGKSAEQIDQ--LAGLA------PLERLGTPEEIAAAVA 223 (245)
T ss_pred hhHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCccCchhcccCCHHHHHH--HHhcC------CCCCCCCHHHHHHHHH
Confidence 7999999999999887654 37899999999876543 1111111111 00000 0112357899999999
Q ss_pred HHccCCC---CCceEEEeCC
Q 017914 263 ASIDKPS---AWNVYNVVDD 279 (364)
Q Consensus 263 ~~l~~~~---~g~~~~i~~~ 279 (364)
.++.... .|+.+++.++
T Consensus 224 ~l~~~~~~~~~g~~~~~~~g 243 (245)
T PRK12937 224 FLAGPDGAWVNGQVLRVNGG 243 (245)
T ss_pred HHcCccccCccccEEEeCCC
Confidence 9997643 2788888654
|
|
| >TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.60 E-value=1.6e-13 Score=119.19 Aligned_cols=202 Identities=10% Similarity=0.031 Sum_probs=128.2
Q ss_pred CeEEEEc-CChhhHHHHHHHHhCCCEEEEEEe-Cchhhhhhh------hCCceEEEccCChhhH--Hh-------hccCc
Q 017914 60 NRMLILG-MGFVGRIFAEKIKNQGWVVSGTCT-NVMKKKELE------QSGFDVHLFNANETAL--MI-------LTTLK 122 (364)
Q Consensus 60 ~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r-~~~~~~~l~------~~~~~~~~~D~~~~~~--~~-------~~~~d 122 (364)
+++|||| +|+||++++++|+++|++|+++.| +......+. ..++.++.+|++|++. .. ...+|
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 80 (242)
T TIGR01829 1 RIALVTGGMGGIGTAICQRLAKDGYRVAANCGPNEERAEAWLQEQGALGFDFRVVEGDVSSFESCKAAVAKVEAELGPID 80 (242)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHcCCCc
Confidence 5789999 999999999999999999999988 433322211 1357789999999653 22 23579
Q ss_pred eeeEEEEecCCCCCCC----ChhhhHHHH----------HHHHhhcCCccEEEEEccceeecCCCCccccCCCCCCCCCh
Q 017914 123 NYTHLLVSIPPLEGTG----DPMLKHGEL----------LRSTLMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANPTTE 188 (364)
Q Consensus 123 ~v~~~~~~~~~~~~~~----~~~~~~~~~----------l~~a~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~ 188 (364)
+|+|+++......... +.......| ++..++..+.+++|++||....... .....
T Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~-----------~~~~~ 149 (242)
T TIGR01829 81 VLVNNAGITRDATFKKMTYEQWSAVIDTNLNSVFNVTQPVIDGMRERGWGRIINISSVNGQKGQ-----------FGQTN 149 (242)
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcCCC-----------CCcch
Confidence 9999987543211111 111111122 3334445667899999986422111 12357
Q ss_pred hHHHHHHHHHHHHHhhhh---cCCcEEEEEecceecCCCChH-HHHHHhcCcccccccccCCcccccccHHHHHHHHHHH
Q 017914 189 LGRLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRSSV-DTIIKQLPLSEGQKMRRARQYTSRIHVDDICQVLSAS 264 (364)
Q Consensus 189 Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~ 264 (364)
|+.+|...+.+++.++++ .++++++++||.+.++....+ ..+..... .... ...+...+|+++++..+
T Consensus 150 y~~sk~a~~~~~~~la~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~--~~~~------~~~~~~~~~~a~~~~~l 221 (242)
T TIGR01829 150 YSAAKAGMIGFTKALAQEGATKGVTVNTISPGYIATDMVMAMREDVLNSIV--AQIP------VGRLGRPEEIAAAVAFL 221 (242)
T ss_pred hHHHHHHHHHHHHHHHHHhhhhCeEEEEEeeCCCcCccccccchHHHHHHH--hcCC------CCCCcCHHHHHHHHHHH
Confidence 999999999888877543 489999999999887643221 11111100 0000 11235579999999888
Q ss_pred ccCCC---CCceEEEeCCC
Q 017914 265 IDKPS---AWNVYNVVDDD 280 (364)
Q Consensus 265 l~~~~---~g~~~~i~~~~ 280 (364)
+..+. .|+.+.+.++.
T Consensus 222 ~~~~~~~~~G~~~~~~gg~ 240 (242)
T TIGR01829 222 ASEEAGYITGATLSINGGL 240 (242)
T ss_pred cCchhcCccCCEEEecCCc
Confidence 86642 37888887763
|
(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families. |
| >PRK06947 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.60 E-value=1.2e-13 Score=120.31 Aligned_cols=203 Identities=15% Similarity=0.098 Sum_probs=124.3
Q ss_pred CCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEE-eCchhhhhh----h--hCCceEEEccCChhhH--Hh-------hcc
Q 017914 58 SPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTC-TNVMKKKEL----E--QSGFDVHLFNANETAL--MI-------LTT 120 (364)
Q Consensus 58 ~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~-r~~~~~~~l----~--~~~~~~~~~D~~~~~~--~~-------~~~ 120 (364)
|+++||||| +|+||+.+++.|+++|++|+++. |+.+....+ . ..++.++.+|+++.+. .. +..
T Consensus 1 m~k~ilItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 80 (248)
T PRK06947 1 MRKVVLITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAVRAAGGRACVVAGDVANEADVIAMFDAVQSAFGR 80 (248)
T ss_pred CCcEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEeccCCHHHHHHHHHHHHHhcCC
Confidence 357999999 99999999999999999998765 444333222 1 1357789999998653 21 135
Q ss_pred CceeeEEEEecCCCCCCCCh-----hhhHHH------HHH-HHhh---cCC---ccEEEEEccce-eecCCCCccccCCC
Q 017914 121 LKNYTHLLVSIPPLEGTGDP-----MLKHGE------LLR-STLM---NGH---LQWLGYLSSTG-VYGHSGGAWVDEDY 181 (364)
Q Consensus 121 ~d~v~~~~~~~~~~~~~~~~-----~~~~~~------~l~-~a~~---~~~---~~r~v~~Ss~~-vy~~~~~~~~~E~~ 181 (364)
+|+++|+++.........+. ...... ++. .++. ..+ -.++|++||.. +++...
T Consensus 81 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~-------- 152 (248)
T PRK06947 81 LDALVNNAGIVAPSMPLADMDAARLRRMFDTNVLGAYLCAREAARRLSTDRGGRGGAIVNVSSIASRLGSPN-------- 152 (248)
T ss_pred CCEEEECCccCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhcCCCCC--------
Confidence 89999999765332211111 111111 221 1121 111 23699998864 333211
Q ss_pred CCCCCChhHHHHHHHHHHHHHhhhhc---CCcEEEEEecceecCCCCh--HHHHHHhcCcccccccccCCcccccccHHH
Q 017914 182 PANPTTELGRLRLSAEKGWLNLGRDL---GISAQVFRLGGIYGPGRSS--VDTIIKQLPLSEGQKMRRARQYTSRIHVDD 256 (364)
Q Consensus 182 ~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilRp~~v~g~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D 256 (364)
....|+.+|...+.+++.++++. +++++++|||.+..+.... ....... ...... ..-...++|
T Consensus 153 ---~~~~Y~~sK~~~~~~~~~la~~~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~--~~~~~~------~~~~~~~e~ 221 (248)
T PRK06947 153 ---EYVDYAGSKGAVDTLTLGLAKELGPHGVRVNAVRPGLIETEIHASGGQPGRAAR--LGAQTP------LGRAGEADE 221 (248)
T ss_pred ---CCcccHhhHHHHHHHHHHHHHHhhhhCcEEEEEeccCcccccccccCCHHHHHH--HhhcCC------CCCCcCHHH
Confidence 12369999999999988887553 7999999999998763210 0000000 000000 011256899
Q ss_pred HHHHHHHHccCCC---CCceEEEeCC
Q 017914 257 ICQVLSASIDKPS---AWNVYNVVDD 279 (364)
Q Consensus 257 va~~~~~~l~~~~---~g~~~~i~~~ 279 (364)
+|+.++.++.+.. .|+.+.+.++
T Consensus 222 va~~~~~l~~~~~~~~~G~~~~~~gg 247 (248)
T PRK06947 222 VAETIVWLLSDAASYVTGALLDVGGG 247 (248)
T ss_pred HHHHHHHHcCccccCcCCceEeeCCC
Confidence 9999999998764 3777776554
|
|
| >TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=99.59 E-value=8e-14 Score=137.43 Aligned_cols=213 Identities=9% Similarity=0.035 Sum_probs=132.3
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhh--------CCceEEEccCChhhH--Hhh-------
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQ--------SGFDVHLFNANETAL--MIL------- 118 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~--------~~~~~~~~D~~~~~~--~~~------- 118 (364)
..+++||||| +|+||++++++|+++|++|++++|+.+....+.. ..+..+.+|++|.+. ..+
T Consensus 412 l~gkvvLVTGasggIG~aiA~~La~~Ga~Vvi~~r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~~i~~~~ 491 (676)
T TIGR02632 412 LARRVAFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVAAEINGQFGAGRAVALKMDVTDEQAVKAAFADVALAY 491 (676)
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHHHHHHHHHhc
Confidence 3468999999 9999999999999999999999998765443221 245688999999763 222
Q ss_pred ccCceeeEEEEecCCCCCCCChhh----hHHHHH----------HHHhhcCC-ccEEEEEccceeecCCCCccccCCCCC
Q 017914 119 TTLKNYTHLLVSIPPLEGTGDPML----KHGELL----------RSTLMNGH-LQWLGYLSSTGVYGHSGGAWVDEDYPA 183 (364)
Q Consensus 119 ~~~d~v~~~~~~~~~~~~~~~~~~----~~~~~l----------~~a~~~~~-~~r~v~~Ss~~vy~~~~~~~~~E~~~~ 183 (364)
.++|+++|+++............. ....|+ ...++..+ ..++|++||...+...
T Consensus 492 g~iDilV~nAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~al~~m~~~~~~g~IV~iSS~~a~~~~----------- 560 (676)
T TIGR02632 492 GGVDIVVNNAGIATSSPFEETTLQEWQLNLDILATGYFLVAREAFRQMREQGLGGNIVFIASKNAVYAG----------- 560 (676)
T ss_pred CCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEeChhhcCCC-----------
Confidence 268999999986432221111111 111222 22222333 3489999886432111
Q ss_pred CCCChhHHHHHHHHHHHHHhhhh---cCCcEEEEEeccee-cCC--CC-hHHHHHHhcCccc---ccccccCCccccccc
Q 017914 184 NPTTELGRLRLSAEKGWLNLGRD---LGISAQVFRLGGIY-GPG--RS-SVDTIIKQLPLSE---GQKMRRARQYTSRIH 253 (364)
Q Consensus 184 ~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~-g~~--~~-~~~~~~~~~~~~~---~~~~~~~~~~~~~i~ 253 (364)
.....|+.+|.+.+.+++.++.+ .|++++.|+|+.++ |.+ .. ..........+.. ............+++
T Consensus 561 ~~~~aY~aSKaA~~~l~r~lA~el~~~gIrVn~V~Pg~V~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~l~r~v~ 640 (676)
T TIGR02632 561 KNASAYSAAKAAEAHLARCLAAEGGTYGIRVNTVNPDAVLQGSGIWDGEWREERAAAYGIPADELEEHYAKRTLLKRHIF 640 (676)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEECCceecCcccccccchhhhhhcccCChHHHHHHHHhcCCcCCCcC
Confidence 12368999999999999988754 47999999999887 321 11 0000000000000 000111112234588
Q ss_pred HHHHHHHHHHHccCC---CCCceEEEeCCC
Q 017914 254 VDDICQVLSASIDKP---SAWNVYNVVDDD 280 (364)
Q Consensus 254 v~Dva~~~~~~l~~~---~~g~~~~i~~~~ 280 (364)
.+|+|++++.++... ..|+++++.+|.
T Consensus 641 peDVA~av~~L~s~~~~~~TG~~i~vDGG~ 670 (676)
T TIGR02632 641 PADIAEAVFFLASSKSEKTTGCIITVDGGV 670 (676)
T ss_pred HHHHHHHHHHHhCCcccCCcCcEEEECCCc
Confidence 999999999888643 238899988774
|
|
| >PRK06101 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.59 E-value=1.2e-13 Score=119.79 Aligned_cols=182 Identities=15% Similarity=0.095 Sum_probs=120.9
Q ss_pred CCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhh--CCceEEEccCChhhH--Hhhc----cCceeeEEEE
Q 017914 59 PNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQ--SGFDVHLFNANETAL--MILT----TLKNYTHLLV 129 (364)
Q Consensus 59 ~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~--~~~~~~~~D~~~~~~--~~~~----~~d~v~~~~~ 129 (364)
+++|+||| +|+||++++++|+++|++|++++|+++..+.+.. .++.++.+|++|.+. ..++ ..|.++|.++
T Consensus 1 ~~~vlItGas~giG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~d~~i~~ag 80 (240)
T PRK06101 1 MTAVLITGATSGIGKQLALDYAKQGWQVIACGRNQSVLDELHTQSANIFTLAFDVTDHPGTKAALSQLPFIPELWIFNAG 80 (240)
T ss_pred CcEEEEEcCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhcCCCeEEEeeCCCHHHHHHHHHhcccCCCEEEEcCc
Confidence 36899999 9999999999999999999999998776655543 357889999999764 3333 3577777765
Q ss_pred ecCCCCCC-CCh---hhhHH------HHHHHHhhc--CCccEEEEEccce-eecCCCCccccCCCCCCCCChhHHHHHHH
Q 017914 130 SIPPLEGT-GDP---MLKHG------ELLRSTLMN--GHLQWLGYLSSTG-VYGHSGGAWVDEDYPANPTTELGRLRLSA 196 (364)
Q Consensus 130 ~~~~~~~~-~~~---~~~~~------~~l~~a~~~--~~~~r~v~~Ss~~-vy~~~~~~~~~E~~~~~~~~~Y~~sK~~~ 196 (364)
........ .+. ..... .++..++.. .+.+++|++||.. .++. .....|+.+|...
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~isS~~~~~~~------------~~~~~Y~asK~a~ 148 (240)
T PRK06101 81 DCEYMDDGKVDATLMARVFNVNVLGVANCIEGIQPHLSCGHRVVIVGSIASELAL------------PRAEAYGASKAAV 148 (240)
T ss_pred ccccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCeEEEEechhhccCC------------CCCchhhHHHHHH
Confidence 43221110 111 11122 233333332 1235789888753 2211 1235799999999
Q ss_pred HHHHHHhh---hhcCCcEEEEEecceecCCCChHHHHHHhcCcccccccccCCcccccccHHHHHHHHHHHccCCC
Q 017914 197 EKGWLNLG---RDLGISAQVFRLGGIYGPGRSSVDTIIKQLPLSEGQKMRRARQYTSRIHVDDICQVLSASIDKPS 269 (364)
Q Consensus 197 E~~~~~~~---~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~ 269 (364)
+.+.+.++ ...|++++++|||.++++.... .... ....+..+|+|+.++..+++..
T Consensus 149 ~~~~~~l~~e~~~~gi~v~~v~pg~i~t~~~~~-------~~~~----------~~~~~~~~~~a~~i~~~i~~~~ 207 (240)
T PRK06101 149 AYFARTLQLDLRPKGIEVVTVFPGFVATPLTDK-------NTFA----------MPMIITVEQASQEIRAQLARGK 207 (240)
T ss_pred HHHHHHHHHHHHhcCceEEEEeCCcCCCCCcCC-------CCCC----------CCcccCHHHHHHHHHHHHhcCC
Confidence 99998876 3458999999999998764221 0000 0013679999999999998753
|
|
| >PRK12744 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.59 E-value=5.5e-14 Score=123.24 Aligned_cols=209 Identities=11% Similarity=0.004 Sum_probs=124.8
Q ss_pred CCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchh----hhh----hh--hCCceEEEccCChhhH--Hhh------
Q 017914 58 SPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMK----KKE----LE--QSGFDVHLFNANETAL--MIL------ 118 (364)
Q Consensus 58 ~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~----~~~----l~--~~~~~~~~~D~~~~~~--~~~------ 118 (364)
.++++|||| +|+||.++++.|+++|++|+++.++... ... +. ...+.++.+|+++.+. ..+
T Consensus 7 ~~k~vlItGa~~gIG~~~a~~l~~~G~~vv~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 86 (257)
T PRK12744 7 KGKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVKAAGAKAVAFQADLTTAAAVEKLFDDAKAA 86 (257)
T ss_pred CCcEEEEECCCchHHHHHHHHHHHCCCcEEEEecCCccchHHHHHHHHHHHHhCCcEEEEecCcCCHHHHHHHHHHHHHh
Confidence 457999999 9999999999999999998887764321 111 11 1356788999999663 222
Q ss_pred -ccCceeeEEEEecCCCCCCC----ChhhhHHHHH------HHHhhc--CCccEEEEE-ccc-eeecCCCCccccCCCCC
Q 017914 119 -TTLKNYTHLLVSIPPLEGTG----DPMLKHGELL------RSTLMN--GHLQWLGYL-SST-GVYGHSGGAWVDEDYPA 183 (364)
Q Consensus 119 -~~~d~v~~~~~~~~~~~~~~----~~~~~~~~~l------~~a~~~--~~~~r~v~~-Ss~-~vy~~~~~~~~~E~~~~ 183 (364)
..+|.++|+++......... +.......|+ +.++.. ....+++++ ||. +.+.
T Consensus 87 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~iv~~~ss~~~~~~------------- 153 (257)
T PRK12744 87 FGRPDIAINTVGKVLKKPIVEISEAEYDEMFAVNSKSAFFFIKEAGRHLNDNGKIVTLVTSLLGAFT------------- 153 (257)
T ss_pred hCCCCEEEECCcccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCEEEEecchhcccC-------------
Confidence 35799999987643221111 1111122232 222221 112356665 332 2221
Q ss_pred CCCChhHHHHHHHHHHHHHhhhhc---CCcEEEEEecceecCCCChHHHHHHhcCcccccccccCCcccccccHHHHHHH
Q 017914 184 NPTTELGRLRLSAEKGWLNLGRDL---GISAQVFRLGGIYGPGRSSVDTIIKQLPLSEGQKMRRARQYTSRIHVDDICQV 260 (364)
Q Consensus 184 ~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~ 260 (364)
.....|+.+|.+.|.+++.++++. ++++++++||.+.++....... ....................+.+++|+|++
T Consensus 154 ~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~dva~~ 232 (257)
T PRK12744 154 PFYSAYAGSKAPVEHFTRAASKEFGARGISVTAVGPGPMDTPFFYPQEG-AEAVAYHKTAAALSPFSKTGLTDIEDIVPF 232 (257)
T ss_pred CCcccchhhHHHHHHHHHHHHHHhCcCceEEEEEecCccccchhccccc-cchhhcccccccccccccCCCCCHHHHHHH
Confidence 123579999999999999997654 6999999999987653111000 000000000000011111246889999999
Q ss_pred HHHHccCCC--CCceEEEeCCC
Q 017914 261 LSASIDKPS--AWNVYNVVDDD 280 (364)
Q Consensus 261 ~~~~l~~~~--~g~~~~i~~~~ 280 (364)
+..+++... .|+++++.+|.
T Consensus 233 ~~~l~~~~~~~~g~~~~~~gg~ 254 (257)
T PRK12744 233 IRFLVTDGWWITGQTILINGGY 254 (257)
T ss_pred HHHhhcccceeecceEeecCCc
Confidence 999998532 38899888764
|
|
| >PRK07904 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.59 E-value=1.4e-13 Score=120.26 Aligned_cols=184 Identities=16% Similarity=0.166 Sum_probs=122.5
Q ss_pred CCCeEEEEc-CChhhHHHHHHHHhCC-CEEEEEEeCchh-hhh----hhh---CCceEEEccCChhhH--Hhh------c
Q 017914 58 SPNRMLILG-MGFVGRIFAEKIKNQG-WVVSGTCTNVMK-KKE----LEQ---SGFDVHLFNANETAL--MIL------T 119 (364)
Q Consensus 58 ~~~~vlVtG-tG~iG~~l~~~L~~~g-~~V~~~~r~~~~-~~~----l~~---~~~~~~~~D~~~~~~--~~~------~ 119 (364)
..++||||| +|.||++++++|+++| ++|++++|+.++ .+. +.. .+++++.+|++|.+. ..+ .
T Consensus 7 ~~~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~g 86 (253)
T PRK07904 7 NPQTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALDTDSHPKVIDAAFAGG 86 (253)
T ss_pred CCcEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCChHHHHHHHHHHHhcC
Confidence 357899999 9999999999999995 999999998764 322 221 257889999998663 111 3
Q ss_pred cCceeeEEEEecCCCCC-CCChh---hhHH----------HHHHHHhhcCCccEEEEEccceeecCCCCccccCCCCCCC
Q 017914 120 TLKNYTHLLVSIPPLEG-TGDPM---LKHG----------ELLRSTLMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANP 185 (364)
Q Consensus 120 ~~d~v~~~~~~~~~~~~-~~~~~---~~~~----------~~l~~a~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~ 185 (364)
.+|.++|.++....... +.+.. .... ..+...+.+.+..++|++||...+.. ..+
T Consensus 87 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~l~~~~~~~~~~~iv~isS~~g~~~-----------~~~ 155 (253)
T PRK07904 87 DVDVAIVAFGLLGDAEELWQNQRKAVQIAEINYTAAVSVGVLLGEKMRAQGFGQIIAMSSVAGERV-----------RRS 155 (253)
T ss_pred CCCEEEEeeecCCchhhcccCHHHHHHHHHHHhHhHHHHHHHHHHHHHhcCCceEEEEechhhcCC-----------CCC
Confidence 68988888766433211 11111 0112 23445555666789999999653211 112
Q ss_pred CChhHHHHHHHHHHHHHhh---hhcCCcEEEEEecceecCCCChHHHHHHhcCcccccccccCCcccccccHHHHHHHHH
Q 017914 186 TTELGRLRLSAEKGWLNLG---RDLGISAQVFRLGGIYGPGRSSVDTIIKQLPLSEGQKMRRARQYTSRIHVDDICQVLS 262 (364)
Q Consensus 186 ~~~Y~~sK~~~E~~~~~~~---~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~ 262 (364)
...|+.+|.....+.+.+. +..++++++++||.+..+... . ... . ...+..+|+|+.++
T Consensus 156 ~~~Y~~sKaa~~~~~~~l~~el~~~~i~v~~v~Pg~v~t~~~~-------~--~~~--~-------~~~~~~~~~A~~i~ 217 (253)
T PRK07904 156 NFVYGSTKAGLDGFYLGLGEALREYGVRVLVVRPGQVRTRMSA-------H--AKE--A-------PLTVDKEDVAKLAV 217 (253)
T ss_pred CcchHHHHHHHHHHHHHHHHHHhhcCCEEEEEeeCceecchhc-------c--CCC--C-------CCCCCHHHHHHHHH
Confidence 3569999999987766653 345899999999999764211 0 000 0 11378999999999
Q ss_pred HHccCCCC
Q 017914 263 ASIDKPSA 270 (364)
Q Consensus 263 ~~l~~~~~ 270 (364)
..+.++..
T Consensus 218 ~~~~~~~~ 225 (253)
T PRK07904 218 TAVAKGKE 225 (253)
T ss_pred HHHHcCCC
Confidence 99987643
|
|
| >PRK07677 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.59 E-value=2e-13 Score=119.30 Aligned_cols=203 Identities=9% Similarity=-0.009 Sum_probs=126.5
Q ss_pred CCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhh------CCceEEEccCChhhH--Hh-------hccCc
Q 017914 59 PNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQ------SGFDVHLFNANETAL--MI-------LTTLK 122 (364)
Q Consensus 59 ~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~------~~~~~~~~D~~~~~~--~~-------~~~~d 122 (364)
++++|||| +|.||+++++.|+++|++|++++|+......+.. ..+.++.+|++|++. .. +..+|
T Consensus 1 ~k~~lItG~s~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 80 (252)
T PRK07677 1 EKVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVRNPEDVQKMVEQIDEKFGRID 80 (252)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCcc
Confidence 37899999 9999999999999999999999998765443321 357789999999663 21 23679
Q ss_pred eeeEEEEecCCCCCCCC----hhhhHH------HHHHHHh----hc-CCccEEEEEccceeecCCCCccccCCCCCCCCC
Q 017914 123 NYTHLLVSIPPLEGTGD----PMLKHG------ELLRSTL----MN-GHLQWLGYLSSTGVYGHSGGAWVDEDYPANPTT 187 (364)
Q Consensus 123 ~v~~~~~~~~~~~~~~~----~~~~~~------~~l~~a~----~~-~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~ 187 (364)
.++|+++.......... ...... .++..++ .. ....++|++||...+... ....
T Consensus 81 ~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~-----------~~~~ 149 (252)
T PRK07677 81 ALINNAAGNFICPAEDLSVNGWNSVIDIVLNGTFYCSQAVGKYWIEKGIKGNIINMVATYAWDAG-----------PGVI 149 (252)
T ss_pred EEEECCCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCCEEEEEEcChhhccCC-----------CCCc
Confidence 99999864322110010 111111 1233333 12 223589999886432111 1224
Q ss_pred hhHHHHHHHHHHHHHhhhh----cCCcEEEEEecceecCCC--ChH--HHHHHhcCcccccccccCCcccccccHHHHHH
Q 017914 188 ELGRLRLSAEKGWLNLGRD----LGISAQVFRLGGIYGPGR--SSV--DTIIKQLPLSEGQKMRRARQYTSRIHVDDICQ 259 (364)
Q Consensus 188 ~Y~~sK~~~E~~~~~~~~~----~~~~~~ilRp~~v~g~~~--~~~--~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~ 259 (364)
.|+.+|...+.+.+.++.+ +|++++.++||.+.+... ... ...... +.... ...-+...+|+|+
T Consensus 150 ~Y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~PG~v~~~~~~~~~~~~~~~~~~--~~~~~------~~~~~~~~~~va~ 221 (252)
T PRK07677 150 HSAAAKAGVLAMTRTLAVEWGRKYGIRVNAIAPGPIERTGGADKLWESEEAAKR--TIQSV------PLGRLGTPEEIAG 221 (252)
T ss_pred chHHHHHHHHHHHHHHHHHhCcccCeEEEEEeecccccccccccccCCHHHHHH--HhccC------CCCCCCCHHHHHH
Confidence 6999999999998876543 489999999999874321 000 011100 00000 0112467899999
Q ss_pred HHHHHccCC---CCCceEEEeCCC
Q 017914 260 VLSASIDKP---SAWNVYNVVDDD 280 (364)
Q Consensus 260 ~~~~~l~~~---~~g~~~~i~~~~ 280 (364)
++..++... -.|+.+.+.++.
T Consensus 222 ~~~~l~~~~~~~~~g~~~~~~gg~ 245 (252)
T PRK07677 222 LAYFLLSDEAAYINGTCITMDGGQ 245 (252)
T ss_pred HHHHHcCccccccCCCEEEECCCe
Confidence 998888754 237777776654
|
|
| >COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.59 E-value=1.1e-13 Score=118.35 Aligned_cols=193 Identities=8% Similarity=-0.052 Sum_probs=130.4
Q ss_pred CCCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhh-------CCceEEEccCChhhH--Hhh----c--
Q 017914 56 WQSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQ-------SGFDVHLFNANETAL--MIL----T-- 119 (364)
Q Consensus 56 ~~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~-------~~~~~~~~D~~~~~~--~~~----~-- 119 (364)
..+++++|||| |+.||..++++|.++|++|+++.|+.++...+.. -.++++..|+++++. ... .
T Consensus 3 ~~~~~~~lITGASsGIG~~~A~~lA~~g~~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~~~~~~~l~~~l~~~~ 82 (265)
T COG0300 3 PMKGKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKTGVEVEVIPADLSDPEALERLEDELKERG 82 (265)
T ss_pred CCCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCChhHHHHHHHHHHhcC
Confidence 45678999999 9999999999999999999999999998776543 235789999999774 211 2
Q ss_pred -cCceeeEEEEecCCCC----CCCChhhhHHHHHHHHh----------hcCCccEEEEEccceeecCCCCccccCCCCCC
Q 017914 120 -TLKNYTHLLVSIPPLE----GTGDPMLKHGELLRSTL----------MNGHLQWLGYLSSTGVYGHSGGAWVDEDYPAN 184 (364)
Q Consensus 120 -~~d~v~~~~~~~~~~~----~~~~~~~~~~~~l~~a~----------~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~ 184 (364)
.+|+++++|+...... ++.+.......|+.... .+.+-.++|.++|.+-|-+..
T Consensus 83 ~~IdvLVNNAG~g~~g~f~~~~~~~~~~mi~lN~~a~~~LT~~~lp~m~~~~~G~IiNI~S~ag~~p~p----------- 151 (265)
T COG0300 83 GPIDVLVNNAGFGTFGPFLELSLDEEEEMIQLNILALTRLTKAVLPGMVERGAGHIINIGSAAGLIPTP----------- 151 (265)
T ss_pred CcccEEEECCCcCCccchhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechhhcCCCc-----------
Confidence 4788888887644432 12222233344544433 255667999999987553322
Q ss_pred CCChhHHHHHHHHHHHHHhh---hhcCCcEEEEEecceecCCCChHHHHHHhcCcccccccccCCcccccccHHHHHHHH
Q 017914 185 PTTELGRLRLSAEKGWLNLG---RDLGISAQVFRLGGIYGPGRSSVDTIIKQLPLSEGQKMRRARQYTSRIHVDDICQVL 261 (364)
Q Consensus 185 ~~~~Y~~sK~~~E~~~~~~~---~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~ 261 (364)
-...|+.||...-.+...+. +..|+.++.|-||.+..+.... ... .........-++..+|+|+..
T Consensus 152 ~~avY~ATKa~v~~fSeaL~~EL~~~gV~V~~v~PG~~~T~f~~~-----~~~------~~~~~~~~~~~~~~~~va~~~ 220 (265)
T COG0300 152 YMAVYSATKAFVLSFSEALREELKGTGVKVTAVCPGPTRTEFFDA-----KGS------DVYLLSPGELVLSPEDVAEAA 220 (265)
T ss_pred chHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEEecCccccccccc-----ccc------ccccccchhhccCHHHHHHHH
Confidence 23679999988866555543 3458999999999876543210 000 000001123458899999999
Q ss_pred HHHccCCCC
Q 017914 262 SASIDKPSA 270 (364)
Q Consensus 262 ~~~l~~~~~ 270 (364)
+..+.+...
T Consensus 221 ~~~l~~~k~ 229 (265)
T COG0300 221 LKALEKGKR 229 (265)
T ss_pred HHHHhcCCc
Confidence 999998643
|
|
| >PRK06139 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.59 E-value=1.1e-13 Score=125.30 Aligned_cols=193 Identities=9% Similarity=-0.010 Sum_probs=124.8
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhh----h--CCceEEEccCChhhH--Hhh-------cc
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELE----Q--SGFDVHLFNANETAL--MIL-------TT 120 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~----~--~~~~~~~~D~~~~~~--~~~-------~~ 120 (364)
..+++||||| +|.||++++++|+++|++|++++|+.+..+.+. . ..+.++.+|++|.+. ..+ ..
T Consensus 5 l~~k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 84 (330)
T PRK06139 5 LHGAVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRALGAEVLVVPTDVTDADQVKALATQAASFGGR 84 (330)
T ss_pred CCCCEEEEcCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHhcCC
Confidence 3457999999 999999999999999999999999877654432 1 245678899999764 222 45
Q ss_pred CceeeEEEEecCCCCCCCChhh----hHHHHHHHH----------hhcCCccEEEEEccceeecCCCCccccCCCCCCCC
Q 017914 121 LKNYTHLLVSIPPLEGTGDPML----KHGELLRST----------LMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANPT 186 (364)
Q Consensus 121 ~d~v~~~~~~~~~~~~~~~~~~----~~~~~l~~a----------~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~ 186 (364)
+|.++|+++............. ....|+... ++..+..++|++||...+.... ..
T Consensus 85 iD~lVnnAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~~~~~~~g~iV~isS~~~~~~~p-----------~~ 153 (330)
T PRK06139 85 IDVWVNNVGVGAVGRFEETPIEAHEQVIQTNLIGYMRDAHAALPIFKKQGHGIFINMISLGGFAAQP-----------YA 153 (330)
T ss_pred CCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhcCCCC-----------Cc
Confidence 7999999875433221111111 122233222 2344456899998876442211 23
Q ss_pred ChhHHHHHHHHHHHHHhhhh----cCCcEEEEEecceecCCCChHHHHHHhcCcccccccccCCcccccccHHHHHHHHH
Q 017914 187 TELGRLRLSAEKGWLNLGRD----LGISAQVFRLGGIYGPGRSSVDTIIKQLPLSEGQKMRRARQYTSRIHVDDICQVLS 262 (364)
Q Consensus 187 ~~Y~~sK~~~E~~~~~~~~~----~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~ 262 (364)
..|+.+|...+.+.+.+..+ .+++++.+.||.+..+.......... .. ......+++.+|+|++++
T Consensus 154 ~~Y~asKaal~~~~~sL~~El~~~~gI~V~~v~Pg~v~T~~~~~~~~~~~-------~~---~~~~~~~~~pe~vA~~il 223 (330)
T PRK06139 154 AAYSASKFGLRGFSEALRGELADHPDIHVCDVYPAFMDTPGFRHGANYTG-------RR---LTPPPPVYDPRRVAKAVV 223 (330)
T ss_pred hhHHHHHHHHHHHHHHHHHHhCCCCCeEEEEEecCCccCccccccccccc-------cc---ccCCCCCCCHHHHHHHHH
Confidence 57999999877777766533 37999999999987764211000000 00 001123578999999999
Q ss_pred HHccCCCC
Q 017914 263 ASIDKPSA 270 (364)
Q Consensus 263 ~~l~~~~~ 270 (364)
.+++++..
T Consensus 224 ~~~~~~~~ 231 (330)
T PRK06139 224 RLADRPRA 231 (330)
T ss_pred HHHhCCCC
Confidence 99987643
|
|
| >PRK12747 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.59 E-value=1.4e-13 Score=120.38 Aligned_cols=207 Identities=12% Similarity=0.016 Sum_probs=126.4
Q ss_pred CCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEE-eCchhhhh----hhh--CCceEEEccCChhhH-----H-hh-----
Q 017914 58 SPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTC-TNVMKKKE----LEQ--SGFDVHLFNANETAL-----M-IL----- 118 (364)
Q Consensus 58 ~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~-r~~~~~~~----l~~--~~~~~~~~D~~~~~~-----~-~~----- 118 (364)
.++++|||| +|+||++++++|.+.|++|++.. |+.+.... +.. ..+..+.+|+++.+. . ..
T Consensus 3 ~~k~~lItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 82 (252)
T PRK12747 3 KGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQN 82 (252)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHHhcCCceEEEecccCCHHHHHHHHHHHHHHhhh
Confidence 358999999 99999999999999999998875 44333322 111 235677889998542 1 11
Q ss_pred ----ccCceeeEEEEecCCCCCCCCh----hhhHHHHHHHH------hhc--CCccEEEEEccceeecCCCCccccCCCC
Q 017914 119 ----TTLKNYTHLLVSIPPLEGTGDP----MLKHGELLRST------LMN--GHLQWLGYLSSTGVYGHSGGAWVDEDYP 182 (364)
Q Consensus 119 ----~~~d~v~~~~~~~~~~~~~~~~----~~~~~~~l~~a------~~~--~~~~r~v~~Ss~~vy~~~~~~~~~E~~~ 182 (364)
..+|.++|+++........... ......|+... +.. ....++|++||...+...
T Consensus 83 ~~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~~---------- 152 (252)
T PRK12747 83 RTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAATRISL---------- 152 (252)
T ss_pred hcCCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhcCCeEEEECCcccccCC----------
Confidence 1589999998854321111111 11122332221 111 112589999997654221
Q ss_pred CCCCChhHHHHHHHHHHHHHhhhh---cCCcEEEEEecceecCCCChHHHHHHhcCcccccccccCCcccccccHHHHHH
Q 017914 183 ANPTTELGRLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRSSVDTIIKQLPLSEGQKMRRARQYTSRIHVDDICQ 259 (364)
Q Consensus 183 ~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~ 259 (364)
.....|+.+|.+.+.+++.++.+ .|++++++.||.+.++.... +........ ..........+.+++|+|+
T Consensus 153 -~~~~~Y~~sKaa~~~~~~~la~e~~~~girvn~v~Pg~v~t~~~~~---~~~~~~~~~--~~~~~~~~~~~~~~~dva~ 226 (252)
T PRK12747 153 -PDFIAYSMTKGAINTMTFTLAKQLGARGITVNAILPGFIKTDMNAE---LLSDPMMKQ--YATTISAFNRLGEVEDIAD 226 (252)
T ss_pred -CCchhHHHHHHHHHHHHHHHHHHHhHcCCEEEEEecCCccCchhhh---cccCHHHHH--HHHhcCcccCCCCHHHHHH
Confidence 12357999999999999888654 48999999999997764211 000000000 0000001123578999999
Q ss_pred HHHHHccCCC---CCceEEEeCCC
Q 017914 260 VLSASIDKPS---AWNVYNVVDDD 280 (364)
Q Consensus 260 ~~~~~l~~~~---~g~~~~i~~~~ 280 (364)
++..++.... .|+.+.+.+|.
T Consensus 227 ~~~~l~s~~~~~~~G~~i~vdgg~ 250 (252)
T PRK12747 227 TAAFLASPDSRWVTGQLIDVSGGS 250 (252)
T ss_pred HHHHHcCccccCcCCcEEEecCCc
Confidence 9999887542 37888877653
|
|
| >PRK07023 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.59 E-value=9.7e-14 Score=120.63 Aligned_cols=152 Identities=11% Similarity=0.038 Sum_probs=104.2
Q ss_pred CCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhh-hhhhCCceEEEccCChhhH--Hhh-----------ccCce
Q 017914 59 PNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKK-ELEQSGFDVHLFNANETAL--MIL-----------TTLKN 123 (364)
Q Consensus 59 ~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~l~~~~~~~~~~D~~~~~~--~~~-----------~~~d~ 123 (364)
||+||||| +|+||++++++|+++|++|++++|+..+.. .....++.++.+|+++.+. ..+ ..+|.
T Consensus 1 ~~~vlItGasggiG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (243)
T PRK07023 1 AVRAIVTGHSRGLGAALAEQLLQPGIAVLGVARSRHPSLAAAAGERLAEVELDLSDAAAAAAWLAGDLLAAFVDGASRVL 80 (243)
T ss_pred CceEEEecCCcchHHHHHHHHHhCCCEEEEEecCcchhhhhccCCeEEEEEeccCCHHHHHHHHHHHHHHHhccCCCceE
Confidence 46899999 999999999999999999999999765322 1111357788999999763 211 14678
Q ss_pred eeEEEEecCCCCCCCC--h---hhhH----------HHHHHHHhhcCCccEEEEEccceeecCCCCccccCCCCCCCCCh
Q 017914 124 YTHLLVSIPPLEGTGD--P---MLKH----------GELLRSTLMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANPTTE 188 (364)
Q Consensus 124 v~~~~~~~~~~~~~~~--~---~~~~----------~~~l~~a~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~ 188 (364)
++|+++.........+ . .... ...+...+...+.+++|++||...+.. ..+...
T Consensus 81 ~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~-----------~~~~~~ 149 (243)
T PRK07023 81 LINNAGTVEPIGPLATLDAAAIARAVGLNVAAPLMLTAALAQAASDAAERRILHISSGAARNA-----------YAGWSV 149 (243)
T ss_pred EEEcCcccCCCCccccCCHHHHHHHeeeeehHHHHHHHHHHHHhhccCCCEEEEEeChhhcCC-----------CCCchH
Confidence 9998876433211110 0 0101 123333444455679999999765432 223468
Q ss_pred hHHHHHHHHHHHHHhhhh--cCCcEEEEEecceec
Q 017914 189 LGRLRLSAEKGWLNLGRD--LGISAQVFRLGGIYG 221 (364)
Q Consensus 189 Y~~sK~~~E~~~~~~~~~--~~~~~~ilRp~~v~g 221 (364)
|+.+|...|.+++.++.+ .++++++++||.+-.
T Consensus 150 Y~~sK~a~~~~~~~~~~~~~~~i~v~~v~pg~~~t 184 (243)
T PRK07023 150 YCATKAALDHHARAVALDANRALRIVSLAPGVVDT 184 (243)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCcEEEEecCCcccc
Confidence 999999999999988753 579999999998744
|
|
| >PRK08226 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.59 E-value=1.4e-13 Score=121.04 Aligned_cols=214 Identities=10% Similarity=-0.064 Sum_probs=128.4
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhh---hhh--CCceEEEccCChhhH--Hhh-------ccC
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKE---LEQ--SGFDVHLFNANETAL--MIL-------TTL 121 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~---l~~--~~~~~~~~D~~~~~~--~~~-------~~~ 121 (364)
..++++|||| +|+||+++++.|+++|++|++++|+...... +.. ..+.++.+|+++.+. ..+ ..+
T Consensus 4 ~~~~~~lItG~s~giG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i 83 (263)
T PRK08226 4 LTGKTALITGALQGIGEGIARVFARHGANLILLDISPEIEKLADELCGRGHRCTAVVADVRDPASVAAAIKRAKEKEGRI 83 (263)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 3458999999 9999999999999999999999997642221 211 346788999999653 222 357
Q ss_pred ceeeEEEEecCCCCCCCChhh----hHHHH------HHHH----hhcCCccEEEEEccceeecCCCCccccCCCCCCCCC
Q 017914 122 KNYTHLLVSIPPLEGTGDPML----KHGEL------LRST----LMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANPTT 187 (364)
Q Consensus 122 d~v~~~~~~~~~~~~~~~~~~----~~~~~------l~~a----~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~ 187 (364)
|.++|+++............. ....| +..+ +...+..++|++||.... .. +.....
T Consensus 84 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~--~~--------~~~~~~ 153 (263)
T PRK08226 84 DILVNNAGVCRLGSFLDMSDEDRDFHIDINIKGVWNVTKAVLPEMIARKDGRIVMMSSVTGD--MV--------ADPGET 153 (263)
T ss_pred CEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhc--cc--------CCCCcc
Confidence 999999876433221111111 11122 2222 223445689999885321 00 111235
Q ss_pred hhHHHHHHHHHHHHHhhhhc---CCcEEEEEecceecCCCChHHHHHHhcCcc-cccccccCCcccccccHHHHHHHHHH
Q 017914 188 ELGRLRLSAEKGWLNLGRDL---GISAQVFRLGGIYGPGRSSVDTIIKQLPLS-EGQKMRRARQYTSRIHVDDICQVLSA 263 (364)
Q Consensus 188 ~Y~~sK~~~E~~~~~~~~~~---~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~v~Dva~~~~~ 263 (364)
.|+.+|...|.+++.++.+. +++++.++||.+.++....+.......... .............+...+|+|++++.
T Consensus 154 ~Y~~sK~a~~~~~~~la~~~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~va~~~~~ 233 (263)
T PRK08226 154 AYALTKAAIVGLTKSLAVEYAQSGIRVNAICPGYVRTPMAESIARQSNPEDPESVLTEMAKAIPLRRLADPLEVGELAAF 233 (263)
T ss_pred hHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccCHHHHhhhhhccCCCcHHHHHHHhccCCCCCCCCHHHHHHHHHH
Confidence 79999999999998887543 799999999998775311100000000000 00000000011224679999999988
Q ss_pred HccCCC---CCceEEEeCCC
Q 017914 264 SIDKPS---AWNVYNVVDDD 280 (364)
Q Consensus 264 ~l~~~~---~g~~~~i~~~~ 280 (364)
++.... .|+.+.+.+|.
T Consensus 234 l~~~~~~~~~g~~i~~dgg~ 253 (263)
T PRK08226 234 LASDESSYLTGTQNVIDGGS 253 (263)
T ss_pred HcCchhcCCcCceEeECCCc
Confidence 886432 37777776653
|
|
| >COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.58 E-value=6.5e-14 Score=116.25 Aligned_cols=196 Identities=14% Similarity=0.070 Sum_probs=129.0
Q ss_pred CCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhh----CCceEEEccCChhhH---------HhhccCce
Q 017914 58 SPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQ----SGFDVHLFNANETAL---------MILTTLKN 123 (364)
Q Consensus 58 ~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~----~~~~~~~~D~~~~~~---------~~~~~~d~ 123 (364)
..|.|+||| ++.||.++++.|.+.|++|++..|+.++.+.+.. ..+..+..|++|.+. ..+..+|.
T Consensus 5 ~~kv~lITGASSGiG~A~A~~l~~~G~~vvl~aRR~drL~~la~~~~~~~~~~~~~DVtD~~~~~~~i~~~~~~~g~iDi 84 (246)
T COG4221 5 KGKVALITGASSGIGEATARALAEAGAKVVLAARREERLEALADEIGAGAALALALDVTDRAAVEAAIEALPEEFGRIDI 84 (246)
T ss_pred CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEeccHHHHHHHHHhhccCceEEEeeccCCHHHHHHHHHHHHHhhCcccE
Confidence 457899999 8999999999999999999999999998887753 246889999999753 22356788
Q ss_pred eeEEEEecCCCCCC----CChhhhHHHHHHHHh----------hcCCccEEEEEccceeecCCCCccccCCCCCCCCChh
Q 017914 124 YTHLLVSIPPLEGT----GDPMLKHGELLRSTL----------MNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANPTTEL 189 (364)
Q Consensus 124 v~~~~~~~~~~~~~----~~~~~~~~~~l~~a~----------~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y 189 (364)
+++.|+......-. .+.......|+...+ .+.+..++|.+||..-. .+....+.|
T Consensus 85 LvNNAGl~~g~~~~~~~~~dw~~Mid~Ni~G~l~~~~avLP~m~~r~~G~IiN~~SiAG~-----------~~y~~~~vY 153 (246)
T COG4221 85 LVNNAGLALGDPLDEADLDDWDRMIDTNVKGLLNGTRAVLPGMVERKSGHIINLGSIAGR-----------YPYPGGAVY 153 (246)
T ss_pred EEecCCCCcCChhhhCCHHHHHHHHHHHHHHHHHHHHHhhhHHHhcCCceEEEecccccc-----------ccCCCCccc
Confidence 88888776652211 111122233444443 24445599999987521 111133679
Q ss_pred HHHHHHHHHHHHHhhhh---cCCcEEEEEecceecCCCChHHHHHHhcCcccccccccCCcccccccHHHHHHHHHHHcc
Q 017914 190 GRLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRSSVDTIIKQLPLSEGQKMRRARQYTSRIHVDDICQVLSASID 266 (364)
Q Consensus 190 ~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~ 266 (364)
+.+|+....+.+...++ .+++++.+-||.+-......+. ... .......-......+..+|+|++++.+++
T Consensus 154 ~ATK~aV~~fs~~LR~e~~g~~IRVt~I~PG~v~~~~~s~v~---~~g---~~~~~~~~y~~~~~l~p~dIA~~V~~~~~ 227 (246)
T COG4221 154 GATKAAVRAFSLGLRQELAGTGIRVTVISPGLVETTEFSTVR---FEG---DDERADKVYKGGTALTPEDIAEAVLFAAT 227 (246)
T ss_pred hhhHHHHHHHHHHHHHHhcCCCeeEEEecCceecceeccccc---CCc---hhhhHHHHhccCCCCCHHHHHHHHHHHHh
Confidence 99999998888777543 4799999999987442111000 000 00000000012334889999999999999
Q ss_pred CCCC
Q 017914 267 KPSA 270 (364)
Q Consensus 267 ~~~~ 270 (364)
+|..
T Consensus 228 ~P~~ 231 (246)
T COG4221 228 QPQH 231 (246)
T ss_pred CCCc
Confidence 9854
|
|
| >PRK06924 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.58 E-value=1.4e-13 Score=120.25 Aligned_cols=204 Identities=9% Similarity=0.065 Sum_probs=121.2
Q ss_pred CCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCc-hhhhhhh---hCCceEEEccCChhhH--Hhhcc---------Cc
Q 017914 59 PNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNV-MKKKELE---QSGFDVHLFNANETAL--MILTT---------LK 122 (364)
Q Consensus 59 ~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~-~~~~~l~---~~~~~~~~~D~~~~~~--~~~~~---------~d 122 (364)
||+||||| +|+||++++++|+++|++|++++|+. +....+. ..++.++.+|++|.+. ..++. .+
T Consensus 1 ~k~vlItGasggiG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~ 80 (251)
T PRK06924 1 MRYVIITGTSQGLGEAIANQLLEKGTHVISISRTENKELTKLAEQYNSNLTFHSLDLQDVHELETNFNEILSSIQEDNVS 80 (251)
T ss_pred CcEEEEecCCchHHHHHHHHHHhcCCEEEEEeCCchHHHHHHHhccCCceEEEEecCCCHHHHHHHHHHHHHhcCcccCC
Confidence 36899999 99999999999999999999999976 3322222 1357789999999663 22221 12
Q ss_pred --eeeEEEEecCCCCCCCC-hhhhH--------------HHHHHHHhhc-CCccEEEEEccceeecCCCCccccCCCCCC
Q 017914 123 --NYTHLLVSIPPLEGTGD-PMLKH--------------GELLRSTLMN-GHLQWLGYLSSTGVYGHSGGAWVDEDYPAN 184 (364)
Q Consensus 123 --~v~~~~~~~~~~~~~~~-~~~~~--------------~~~l~~a~~~-~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~ 184 (364)
.++|+++.........+ ..... ..+++..++. .+.+++|++||...+. +..
T Consensus 81 ~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~-----------~~~ 149 (251)
T PRK06924 81 SIHLINNAGMVAPIKPIEKAESEELITNVHLNLLAPMILTSTFMKHTKDWKVDKRVINISSGAAKN-----------PYF 149 (251)
T ss_pred ceEEEEcceecccCcccccCCHHHHHHHhccceehHHHHHHHHHHHHhccCCCceEEEecchhhcC-----------CCC
Confidence 45666654332221111 11111 1223333333 2346899999865432 223
Q ss_pred CCChhHHHHHHHHHHHHHhhhh-----cCCcEEEEEecceecCCCChHHHHHHh--cCcccccccccCCcccccccHHHH
Q 017914 185 PTTELGRLRLSAEKGWLNLGRD-----LGISAQVFRLGGIYGPGRSSVDTIIKQ--LPLSEGQKMRRARQYTSRIHVDDI 257 (364)
Q Consensus 185 ~~~~Y~~sK~~~E~~~~~~~~~-----~~~~~~ilRp~~v~g~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~i~v~Dv 257 (364)
+...|+.+|...|.+++.++.+ .++++..|+||.+-.+... ..... ................-+..++|+
T Consensus 150 ~~~~Y~~sKaa~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv 226 (251)
T PRK06924 150 GWSAYCSSKAGLDMFTQTVATEQEEEEYPVKIVAFSPGVMDTNMQA---QIRSSSKEDFTNLDRFITLKEEGKLLSPEYV 226 (251)
T ss_pred CcHHHhHHHHHHHHHHHHHHHHhhhcCCCeEEEEecCCccccHhHH---HHHhcCcccchHHHHHHHHhhcCCcCCHHHH
Confidence 4568999999999999888643 4789999999987543211 10000 000000000000001124789999
Q ss_pred HHHHHHHccCC--CCCceEEE
Q 017914 258 CQVLSASIDKP--SAWNVYNV 276 (364)
Q Consensus 258 a~~~~~~l~~~--~~g~~~~i 276 (364)
|++++.++..+ ..|+.+.+
T Consensus 227 a~~~~~l~~~~~~~~G~~~~v 247 (251)
T PRK06924 227 AKALRNLLETEDFPNGEVIDI 247 (251)
T ss_pred HHHHHHHHhcccCCCCCEeeh
Confidence 99999999863 22555544
|
|
| >PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.58 E-value=2.5e-13 Score=119.48 Aligned_cols=211 Identities=13% Similarity=-0.045 Sum_probs=130.0
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhh---CCceEEEccCChhhH--Hhh-------ccCce
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQ---SGFDVHLFNANETAL--MIL-------TTLKN 123 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~---~~~~~~~~D~~~~~~--~~~-------~~~d~ 123 (364)
..++++|||| +|+||++++++|+++|++|++++|+.++.+.+.. .++.++.+|++|.+. ..+ ..+|.
T Consensus 4 ~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~ 83 (263)
T PRK06200 4 LHGQVALITGGGSGIGRALVERFLAEGARVAVLERSAEKLASLRQRFGDHVLVVEGDVTSYADNQRAVDQTVDAFGKLDC 83 (263)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHhcCCCCE
Confidence 3457999999 9999999999999999999999998776554432 347789999999653 222 35799
Q ss_pred eeEEEEecCCCCCC---C-Ch----hh-hHH------HHHHHH----hhcCCccEEEEEccceeecCCCCccccCCCCCC
Q 017914 124 YTHLLVSIPPLEGT---G-DP----ML-KHG------ELLRST----LMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPAN 184 (364)
Q Consensus 124 v~~~~~~~~~~~~~---~-~~----~~-~~~------~~l~~a----~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~ 184 (364)
++|+++........ . +. +. ... .++..+ ++.. ..++|++||...+... .
T Consensus 84 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~g~iv~~sS~~~~~~~-----------~ 151 (263)
T PRK06200 84 FVGNAGIWDYNTSLVDIPAETLDTAFDEIFNVNVKGYLLGAKAALPALKAS-GGSMIFTLSNSSFYPG-----------G 151 (263)
T ss_pred EEECCCCcccCCCcccCChhHHHHHHHHHeeeccHhHHHHHHHHHHHHHhc-CCEEEEECChhhcCCC-----------C
Confidence 99998754321111 1 00 00 011 112222 2222 2579999987654322 1
Q ss_pred CCChhHHHHHHHHHHHHHhhhhc--CCcEEEEEecceecCCCChHHHHHHh---cCcc-cccccccCCcccccccHHHHH
Q 017914 185 PTTELGRLRLSAEKGWLNLGRDL--GISAQVFRLGGIYGPGRSSVDTIIKQ---LPLS-EGQKMRRARQYTSRIHVDDIC 258 (364)
Q Consensus 185 ~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~ilRp~~v~g~~~~~~~~~~~~---~~~~-~~~~~~~~~~~~~~i~v~Dva 258 (364)
....|+.+|...+.+++.++.+. +++++.|.||.+..+........... .... ............-+...+|+|
T Consensus 152 ~~~~Y~~sK~a~~~~~~~la~el~~~Irvn~i~PG~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~eva 231 (263)
T PRK06200 152 GGPLYTASKHAVVGLVRQLAYELAPKIRVNGVAPGGTVTDLRGPASLGQGETSISDSPGLADMIAAITPLQFAPQPEDHT 231 (263)
T ss_pred CCchhHHHHHHHHHHHHHHHHHHhcCcEEEEEeCCccccCCcCccccCCCCcccccccchhHHhhcCCCCCCCCCHHHHh
Confidence 23579999999999999887653 48999999998865431100000000 0000 000000000112346789999
Q ss_pred HHHHHHccCC-C---CCceEEEeCC
Q 017914 259 QVLSASIDKP-S---AWNVYNVVDD 279 (364)
Q Consensus 259 ~~~~~~l~~~-~---~g~~~~i~~~ 279 (364)
++++.++... . .|+.+.+.+|
T Consensus 232 ~~~~fl~s~~~~~~itG~~i~vdgG 256 (263)
T PRK06200 232 GPYVLLASRRNSRALTGVVINADGG 256 (263)
T ss_pred hhhhheecccccCcccceEEEEcCc
Confidence 9999988755 3 3788887665
|
|
| >PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.58 E-value=3.3e-13 Score=117.81 Aligned_cols=204 Identities=10% Similarity=-0.038 Sum_probs=127.1
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhh--hhhhh--CCceEEEccCChhhH--Hhh-------ccCc
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKK--KELEQ--SGFDVHLFNANETAL--MIL-------TTLK 122 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~--~~l~~--~~~~~~~~D~~~~~~--~~~-------~~~d 122 (364)
..++++|||| +|.||++++++|+++|++|++++|+.... ..+.. .++.++.+|+++.+. ..+ ..+|
T Consensus 6 l~~k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~iD 85 (251)
T PRK12481 6 LNGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEAPETQAQVEALGRKFHFITADLIQQKDIDSIVSQAVEVMGHID 85 (251)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHcCCeEEEEEeCCCCHHHHHHHHHHHHHHcCCCC
Confidence 4468999999 99999999999999999999998864321 11221 346788999999763 222 3579
Q ss_pred eeeEEEEecCCCCCCC----ChhhhHHHH----------HHHHhhcCC-ccEEEEEccceeecCCCCccccCCCCCCCCC
Q 017914 123 NYTHLLVSIPPLEGTG----DPMLKHGEL----------LRSTLMNGH-LQWLGYLSSTGVYGHSGGAWVDEDYPANPTT 187 (364)
Q Consensus 123 ~v~~~~~~~~~~~~~~----~~~~~~~~~----------l~~a~~~~~-~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~ 187 (364)
+++|+++......... +.......| +...+...+ ..++|++||...+.... ...
T Consensus 86 ~lv~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~-----------~~~ 154 (251)
T PRK12481 86 ILINNAGIIRRQDLLEFGNKDWDDVININQKTVFFLSQAVAKQFVKQGNGGKIINIASMLSFQGGI-----------RVP 154 (251)
T ss_pred EEEECCCcCCCCCcccCCHHHHHHHheeCcHHHHHHHHHHHHHHHHcCCCCEEEEeCChhhcCCCC-----------CCc
Confidence 9999887543221110 111111112 122222222 35899999876543221 224
Q ss_pred hhHHHHHHHHHHHHHhhh---hcCCcEEEEEecceecCCCChH---HHHHHhcCcccccccccCCcccccccHHHHHHHH
Q 017914 188 ELGRLRLSAEKGWLNLGR---DLGISAQVFRLGGIYGPGRSSV---DTIIKQLPLSEGQKMRRARQYTSRIHVDDICQVL 261 (364)
Q Consensus 188 ~Y~~sK~~~E~~~~~~~~---~~~~~~~ilRp~~v~g~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~ 261 (364)
.|+.+|.+.+.+.+.++. ..|++++.++||.+-.+....+ ...... +.. .. + ...+...+|+|+++
T Consensus 155 ~Y~asK~a~~~l~~~la~e~~~~girvn~v~PG~v~t~~~~~~~~~~~~~~~--~~~--~~--p--~~~~~~peeva~~~ 226 (251)
T PRK12481 155 SYTASKSAVMGLTRALATELSQYNINVNAIAPGYMATDNTAALRADTARNEA--ILE--RI--P--ASRWGTPDDLAGPA 226 (251)
T ss_pred chHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCCCccCchhhcccChHHHHH--HHh--cC--C--CCCCcCHHHHHHHH
Confidence 799999999999988775 3589999999998865431111 000000 000 00 0 11246789999999
Q ss_pred HHHccCCC---CCceEEEeCC
Q 017914 262 SASIDKPS---AWNVYNVVDD 279 (364)
Q Consensus 262 ~~~l~~~~---~g~~~~i~~~ 279 (364)
+.++.... .|+.+.+.+|
T Consensus 227 ~~L~s~~~~~~~G~~i~vdgg 247 (251)
T PRK12481 227 IFLSSSASDYVTGYTLAVDGG 247 (251)
T ss_pred HHHhCccccCcCCceEEECCC
Confidence 99987542 3778777655
|
|
| >PRK07831 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.58 E-value=3.6e-13 Score=118.46 Aligned_cols=204 Identities=9% Similarity=-0.023 Sum_probs=128.1
Q ss_pred CCCCeEEEEc-CC-hhhHHHHHHHHhCCCEEEEEEeCchhhhhhh----h----CCceEEEccCChhhH--Hhh------
Q 017914 57 QSPNRMLILG-MG-FVGRIFAEKIKNQGWVVSGTCTNVMKKKELE----Q----SGFDVHLFNANETAL--MIL------ 118 (364)
Q Consensus 57 ~~~~~vlVtG-tG-~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~----~----~~~~~~~~D~~~~~~--~~~------ 118 (364)
..++++|||| +| .||+++++.|+++|++|++.+|+.++.+... . ..+.++.+|+++.+. ..+
T Consensus 15 ~~~k~vlItG~sg~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 94 (262)
T PRK07831 15 LAGKVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEAQVDALIDAAVER 94 (262)
T ss_pred cCCCEEEEECCCcccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHHHHHHHHHHHHHH
Confidence 3458999998 77 6999999999999999999999776543321 1 246788999998653 222
Q ss_pred -ccCceeeEEEEecCCCCCCCChhhh----HHHHHH----------HHhhcCC-ccEEEEEccceeecCCCCccccCCCC
Q 017914 119 -TTLKNYTHLLVSIPPLEGTGDPMLK----HGELLR----------STLMNGH-LQWLGYLSSTGVYGHSGGAWVDEDYP 182 (364)
Q Consensus 119 -~~~d~v~~~~~~~~~~~~~~~~~~~----~~~~l~----------~a~~~~~-~~r~v~~Ss~~vy~~~~~~~~~E~~~ 182 (364)
..+|+++|+++.............. ...|+. ..+...+ ..++|++||...+..
T Consensus 95 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~ss~~~~~~----------- 163 (262)
T PRK07831 95 LGRLDVLVNNAGLGGQTPVVDMTDDEWSRVLDVTLTGTFRATRAALRYMRARGHGGVIVNNASVLGWRA----------- 163 (262)
T ss_pred cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcCC-----------
Confidence 3579999999754322111111111 112222 1222322 457898887543211
Q ss_pred CCCCChhHHHHHHHHHHHHHhhhh---cCCcEEEEEecceecCCCCh--HHHHHHhcCcccccccccCCcccccccHHHH
Q 017914 183 ANPTTELGRLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRSS--VDTIIKQLPLSEGQKMRRARQYTSRIHVDDI 257 (364)
Q Consensus 183 ~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dv 257 (364)
..+...|+.+|.+.+.+++.++.+ .|+++++|+||.+..+.... -...... +.... ...-+...+|+
T Consensus 164 ~~~~~~Y~~sKaal~~~~~~la~e~~~~gI~v~~i~Pg~~~t~~~~~~~~~~~~~~--~~~~~------~~~r~~~p~~v 235 (262)
T PRK07831 164 QHGQAHYAAAKAGVMALTRCSALEAAEYGVRINAVAPSIAMHPFLAKVTSAELLDE--LAARE------AFGRAAEPWEV 235 (262)
T ss_pred CCCCcchHHHHHHHHHHHHHHHHHhCccCeEEEEEeeCCccCcccccccCHHHHHH--HHhcC------CCCCCcCHHHH
Confidence 113457999999999999988754 58999999999988764211 0111111 00000 01123668999
Q ss_pred HHHHHHHccCCC---CCceEEEeCC
Q 017914 258 CQVLSASIDKPS---AWNVYNVVDD 279 (364)
Q Consensus 258 a~~~~~~l~~~~---~g~~~~i~~~ 279 (364)
|++++.++.... .|+++.+.++
T Consensus 236 a~~~~~l~s~~~~~itG~~i~v~~~ 260 (262)
T PRK07831 236 ANVIAFLASDYSSYLTGEVVSVSSQ 260 (262)
T ss_pred HHHHHHHcCchhcCcCCceEEeCCC
Confidence 999999987653 3777776553
|
|
| >PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.58 E-value=4.3e-13 Score=117.53 Aligned_cols=201 Identities=10% Similarity=-0.019 Sum_probs=125.8
Q ss_pred CCCeEEEEc-CC--hhhHHHHHHHHhCCCEEEEEEeCc-----------hhh----hhhh--hCCceEEEccCChhhH--
Q 017914 58 SPNRMLILG-MG--FVGRIFAEKIKNQGWVVSGTCTNV-----------MKK----KELE--QSGFDVHLFNANETAL-- 115 (364)
Q Consensus 58 ~~~~vlVtG-tG--~iG~~l~~~L~~~g~~V~~~~r~~-----------~~~----~~l~--~~~~~~~~~D~~~~~~-- 115 (364)
++++||||| +| .||.+++++|+++|++|++++|++ ... ..+. ...+.++.+|+++.+.
T Consensus 4 ~~k~vlItGas~~~giG~~la~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~ 83 (256)
T PRK12748 4 MKKIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEIESYGVRCEHMEIDLSQPYAPN 83 (256)
T ss_pred CCcEEEEeCCCCCCCHHHHHHHHHHHcCCcEEEEcCCccccccccccchhhHHHHHHHHHhcCCeEEEEECCCCCHHHHH
Confidence 457899999 74 699999999999999999999872 111 1111 1347889999999653
Q ss_pred Hh-------hccCceeeEEEEecCCCCCCC----ChhhhHHHH------HHHHhh----cCCccEEEEEccceeecCCCC
Q 017914 116 MI-------LTTLKNYTHLLVSIPPLEGTG----DPMLKHGEL------LRSTLM----NGHLQWLGYLSSTGVYGHSGG 174 (364)
Q Consensus 116 ~~-------~~~~d~v~~~~~~~~~~~~~~----~~~~~~~~~------l~~a~~----~~~~~r~v~~Ss~~vy~~~~~ 174 (364)
.. +..+|+|+|+++......... +.......| +..++. ..+.+++|++||...+...
T Consensus 84 ~~~~~~~~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~~-- 161 (256)
T PRK12748 84 RVFYAVSERLGDPSILINNAAYSTHTRLEELTAEQLDKHYAVNVRATMLLSSAFAKQYDGKAGGRIINLTSGQSLGPM-- 161 (256)
T ss_pred HHHHHHHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcCCeEEEEECCccccCCC--
Confidence 11 135799999987543221111 111112222 222222 2344689999987655322
Q ss_pred ccccCCCCCCCCChhHHHHHHHHHHHHHhhhh---cCCcEEEEEecceecCCCChHHHHHHhcCcccccccccCCccccc
Q 017914 175 AWVDEDYPANPTTELGRLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRSSVDTIIKQLPLSEGQKMRRARQYTSR 251 (364)
Q Consensus 175 ~~~~E~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (364)
.....|+.+|.+.|.+++.++.+ .+++++.++||.+..+.... ....... .. . ....+
T Consensus 162 ---------~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~~~t~~~~~--~~~~~~~-~~--~-----~~~~~ 222 (256)
T PRK12748 162 ---------PDELAYAATKGAIEAFTKSLAPELAEKGITVNAVNPGPTDTGWITE--ELKHHLV-PK--F-----PQGRV 222 (256)
T ss_pred ---------CCchHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEEeCcccCCCCCh--hHHHhhh-cc--C-----CCCCC
Confidence 12357999999999998887654 48999999999876543211 1111100 00 0 00112
Q ss_pred ccHHHHHHHHHHHccCC---CCCceEEEeCC
Q 017914 252 IHVDDICQVLSASIDKP---SAWNVYNVVDD 279 (364)
Q Consensus 252 i~v~Dva~~~~~~l~~~---~~g~~~~i~~~ 279 (364)
...+|+|+++..++... -.|+++++.++
T Consensus 223 ~~~~~~a~~~~~l~~~~~~~~~g~~~~~d~g 253 (256)
T PRK12748 223 GEPVDAARLIAFLVSEEAKWITGQVIHSEGG 253 (256)
T ss_pred cCHHHHHHHHHHHhCcccccccCCEEEecCC
Confidence 45799999999888753 23788888665
|
|
| >PRK07062 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.58 E-value=2.6e-13 Score=119.57 Aligned_cols=212 Identities=8% Similarity=-0.056 Sum_probs=129.8
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhh----h----CCceEEEccCChhhH--Hh-------h
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELE----Q----SGFDVHLFNANETAL--MI-------L 118 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~----~----~~~~~~~~D~~~~~~--~~-------~ 118 (364)
..++++|||| +|.||+++++.|+++|++|++++|+.++..... . ..+..+.+|++|.+. .. +
T Consensus 6 l~~k~~lItGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 85 (265)
T PRK07062 6 LEGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPGARLLAARCDVLDEADVAAFAAAVEARF 85 (265)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHHHHHHHHHHHHHhc
Confidence 4468999999 999999999999999999999999876544321 1 246678899999763 11 2
Q ss_pred ccCceeeEEEEecCCCCCCCCh----hhhHH----------HHHHHHhhcCCccEEEEEccceeecCCCCccccCCCCCC
Q 017914 119 TTLKNYTHLLVSIPPLEGTGDP----MLKHG----------ELLRSTLMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPAN 184 (364)
Q Consensus 119 ~~~d~v~~~~~~~~~~~~~~~~----~~~~~----------~~l~~a~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~ 184 (364)
..+|.++|+++........... ..... ..++..++..+..++|++||...+....
T Consensus 86 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~----------- 154 (265)
T PRK07062 86 GGVDMLVNNAGQGRVSTFADTTDDAWRDELELKYFSVINPTRAFLPLLRASAAASIVCVNSLLALQPEP----------- 154 (265)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCcEEEEeccccccCCCC-----------
Confidence 3579999988754321111111 11111 2223333444556899999875432211
Q ss_pred CCChhHHHHHHHHHHHHHhhhh---cCCcEEEEEecceecCCCC-hHHHHHHh-cCcccc-ccc--ccCCcccccccHHH
Q 017914 185 PTTELGRLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRS-SVDTIIKQ-LPLSEG-QKM--RRARQYTSRIHVDD 256 (364)
Q Consensus 185 ~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~-~~~~~~~~-~~~~~~-~~~--~~~~~~~~~i~v~D 256 (364)
....|+.+|...+.+.+.++.+ .|++++.++||.+..+... .+...... ...... ... ...-...-+...+|
T Consensus 155 ~~~~y~asKaal~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~~ 234 (265)
T PRK07062 155 HMVATSAARAGLLNLVKSLATELAPKGVRVNSILLGLVESGQWRRRYEARADPGQSWEAWTAALARKKGIPLGRLGRPDE 234 (265)
T ss_pred CchHhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccchhhhHHHHhhccCCChHHHHHHHhhcCCCCcCCCCCHHH
Confidence 2357999999998888877643 4899999999988654311 11000000 000000 000 00001112467899
Q ss_pred HHHHHHHHccCC---CCCceEEEeCC
Q 017914 257 ICQVLSASIDKP---SAWNVYNVVDD 279 (364)
Q Consensus 257 va~~~~~~l~~~---~~g~~~~i~~~ 279 (364)
+|++++.++... -.|+++.+.+|
T Consensus 235 va~~~~~L~s~~~~~~tG~~i~vdgg 260 (265)
T PRK07062 235 AARALFFLASPLSSYTTGSHIDVSGG 260 (265)
T ss_pred HHHHHHHHhCchhcccccceEEEcCc
Confidence 999999988753 24788888765
|
|
| >TIGR02415 23BDH acetoin reductases | Back alignment and domain information |
|---|
Probab=99.57 E-value=1.9e-13 Score=119.64 Aligned_cols=208 Identities=12% Similarity=0.044 Sum_probs=126.6
Q ss_pred CeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhh----hh--CCceEEEccCChhhH--Hhh-------ccCce
Q 017914 60 NRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKEL----EQ--SGFDVHLFNANETAL--MIL-------TTLKN 123 (364)
Q Consensus 60 ~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l----~~--~~~~~~~~D~~~~~~--~~~-------~~~d~ 123 (364)
+++|||| +|+||.+++++|+++|++|+++.|+.+....+ .. ..+.++.+|++|++. ..+ ..+|+
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~ 80 (254)
T TIGR02415 1 KVALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQAGGKAVAYKLDVSDKDQVFSAIDQAAEKFGGFDV 80 (254)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence 4799999 99999999999999999999999986544332 21 246788999999764 222 35799
Q ss_pred eeEEEEecCCCCCCC----ChhhhHHHHH----------HHHhhcCC-ccEEEEEcccee-ecCCCCccccCCCCCCCCC
Q 017914 124 YTHLLVSIPPLEGTG----DPMLKHGELL----------RSTLMNGH-LQWLGYLSSTGV-YGHSGGAWVDEDYPANPTT 187 (364)
Q Consensus 124 v~~~~~~~~~~~~~~----~~~~~~~~~l----------~~a~~~~~-~~r~v~~Ss~~v-y~~~~~~~~~E~~~~~~~~ 187 (364)
++|+++......... +.......|+ ...++..+ .+++|++||... ++.. ...
T Consensus 81 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~------------~~~ 148 (254)
T TIGR02415 81 MVNNAGVAPITPILEITEEELKKVYNVNVKGVLFGIQAAARQFKKQGHGGKIINAASIAGHEGNP------------ILS 148 (254)
T ss_pred EEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEecchhhcCCCC------------CCc
Confidence 999987643321111 1111122222 22222322 368999988543 3211 246
Q ss_pred hhHHHHHHHHHHHHHhhhh---cCCcEEEEEecceecCCCChHHHHHHh-cCccccc---ccccCCcccccccHHHHHHH
Q 017914 188 ELGRLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRSSVDTIIKQ-LPLSEGQ---KMRRARQYTSRIHVDDICQV 260 (364)
Q Consensus 188 ~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~-~~~~~~~---~~~~~~~~~~~i~v~Dva~~ 260 (364)
.|+.+|...|.+++.++.+ .++.+++++||.+..+....+...... .....+. ..........+.+++|++++
T Consensus 149 ~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~Pg~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 228 (254)
T TIGR02415 149 AYSSTKFAVRGLTQTAAQELAPKGITVNAYCPGIVKTPMWEEIDEETSEIAGKPIGEGFEEFSSEIALGRPSEPEDVAGL 228 (254)
T ss_pred chHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccChhhhhhhhhhhhcccCchHHHHHHHHhhCCCCCCCCHHHHHHH
Confidence 7999999999999877654 379999999998855431111100000 0000000 00000011235788999999
Q ss_pred HHHHccCCCC---CceEEEeCC
Q 017914 261 LSASIDKPSA---WNVYNVVDD 279 (364)
Q Consensus 261 ~~~~l~~~~~---g~~~~i~~~ 279 (364)
+..++..... |+.+.+.++
T Consensus 229 ~~~l~~~~~~~~~g~~~~~d~g 250 (254)
T TIGR02415 229 VSFLASEDSDYITGQSILVDGG 250 (254)
T ss_pred HHhhcccccCCccCcEEEecCC
Confidence 9999987642 666665544
|
One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733). |
| >PRK08703 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.56 E-value=4.3e-13 Score=116.23 Aligned_cols=185 Identities=13% Similarity=0.033 Sum_probs=120.4
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhh-------CCceEEEccCChhh---H-H-------h
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQ-------SGFDVHLFNANETA---L-M-------I 117 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~-------~~~~~~~~D~~~~~---~-~-------~ 117 (364)
+.+++|+||| +|+||++++++|+++|++|++++|+.++.+.+.. ..+.++.+|+.+.+ . . .
T Consensus 4 l~~k~vlItG~sggiG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~i~~~ 83 (239)
T PRK08703 4 LSDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLEKVYDAIVEAGHPEPFAIRFDLMSAEEKEFEQFAATIAEA 83 (239)
T ss_pred CCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHHHcCCCCcceEEeeecccchHHHHHHHHHHHHH
Confidence 4568999999 9999999999999999999999998865543311 24567888987521 1 1 1
Q ss_pred h-ccCceeeEEEEecCCCCCCC-----ChhhhHHHHH------H----HHhhcCCccEEEEEccceeecCCCCccccCCC
Q 017914 118 L-TTLKNYTHLLVSIPPLEGTG-----DPMLKHGELL------R----STLMNGHLQWLGYLSSTGVYGHSGGAWVDEDY 181 (364)
Q Consensus 118 ~-~~~d~v~~~~~~~~~~~~~~-----~~~~~~~~~l------~----~a~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~ 181 (364)
+ ..+|.|+|+++......... +.......|+ . ..+...+..++|++||.....
T Consensus 84 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~----------- 152 (239)
T PRK08703 84 TQGKLDGIVHCAGYFYALSPLDFQTVAEWVNQYRINTVAPMGLTRALFPLLKQSPDASVIFVGESHGET----------- 152 (239)
T ss_pred hCCCCCEEEEeccccccCCCccccCHHHHHHHHHHhhhHHHHHHHHHHHHHHhCCCCEEEEEecccccc-----------
Confidence 2 45799999998643211111 1111122222 2 222344456899998853221
Q ss_pred CCCCCChhHHHHHHHHHHHHHhhhhc----CCcEEEEEecceecCCCChHHHHHHhcCcccccccccCCcccccccHHHH
Q 017914 182 PANPTTELGRLRLSAEKGWLNLGRDL----GISAQVFRLGGIYGPGRSSVDTIIKQLPLSEGQKMRRARQYTSRIHVDDI 257 (364)
Q Consensus 182 ~~~~~~~Y~~sK~~~E~~~~~~~~~~----~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dv 257 (364)
+......|+.+|...+.+++.++.+. ++++++++||.+.++..... .. + .....+...+|+
T Consensus 153 ~~~~~~~Y~~sKaa~~~~~~~la~e~~~~~~i~v~~v~pG~v~t~~~~~~--------~~-~------~~~~~~~~~~~~ 217 (239)
T PRK08703 153 PKAYWGGFGASKAALNYLCKVAADEWERFGNLRANVLVPGPINSPQRIKS--------HP-G------EAKSERKSYGDV 217 (239)
T ss_pred CCCCccchHHhHHHHHHHHHHHHHHhccCCCeEEEEEecCcccCcccccc--------CC-C------CCccccCCHHHH
Confidence 11133579999999999998887653 58999999999988742100 00 0 011123678999
Q ss_pred HHHHHHHccC
Q 017914 258 CQVLSASIDK 267 (364)
Q Consensus 258 a~~~~~~l~~ 267 (364)
+.+++.++..
T Consensus 218 ~~~~~~~~~~ 227 (239)
T PRK08703 218 LPAFVWWASA 227 (239)
T ss_pred HHHHHHHhCc
Confidence 9999999974
|
|
| >PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.56 E-value=3.8e-13 Score=116.45 Aligned_cols=196 Identities=14% Similarity=0.047 Sum_probs=125.4
Q ss_pred CCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhh-----CCceEEEccCChhhH--Hh-------hccCc
Q 017914 58 SPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQ-----SGFDVHLFNANETAL--MI-------LTTLK 122 (364)
Q Consensus 58 ~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~-----~~~~~~~~D~~~~~~--~~-------~~~~d 122 (364)
.+++||||| +|+||+++++.|.++|++|++++|+.++.+.+.. .++.++.+|+++++. .. +..+|
T Consensus 4 ~~~~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 83 (238)
T PRK05786 4 KGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMKKTLSKYGNIHYVVGDVSSTESARNVIEKAAKVLNAID 83 (238)
T ss_pred CCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEECCCCCHHHHHHHHHHHHHHhCCCC
Confidence 357999999 9999999999999999999999998776544421 257889999999663 22 23468
Q ss_pred eeeEEEEecCCCCCCCCh---hhhHHHH----------HHHHhhcCCccEEEEEcccee-ecCCCCccccCCCCCCCCCh
Q 017914 123 NYTHLLVSIPPLEGTGDP---MLKHGEL----------LRSTLMNGHLQWLGYLSSTGV-YGHSGGAWVDEDYPANPTTE 188 (364)
Q Consensus 123 ~v~~~~~~~~~~~~~~~~---~~~~~~~----------l~~a~~~~~~~r~v~~Ss~~v-y~~~~~~~~~E~~~~~~~~~ 188 (364)
.++|.++...... ..+. ......| ++..++. + .++|++||... ++. ..+...
T Consensus 84 ~ii~~ag~~~~~~-~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~-~-~~iv~~ss~~~~~~~-----------~~~~~~ 149 (238)
T PRK05786 84 GLVVTVGGYVEDT-VEEFSGLEEMLTNHIKIPLYAVNASLRFLKE-G-SSIVLVSSMSGIYKA-----------SPDQLS 149 (238)
T ss_pred EEEEcCCCcCCCc-hHHHHHHHHHHHHhchHHHHHHHHHHHHHhc-C-CEEEEEecchhcccC-----------CCCchH
Confidence 8888876432211 1111 0001111 1122222 2 47999987542 211 113357
Q ss_pred hHHHHHHHHHHHHHhhhh---cCCcEEEEEecceecCCCChHHHHHHhcCcccccccccCCcccccccHHHHHHHHHHHc
Q 017914 189 LGRLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRSSVDTIIKQLPLSEGQKMRRARQYTSRIHVDDICQVLSASI 265 (364)
Q Consensus 189 Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l 265 (364)
|+.+|...+.+++.++.. .+++++++||++++++.... ..+ .. . ... ...++..+|++++++.++
T Consensus 150 Y~~sK~~~~~~~~~~~~~~~~~gi~v~~i~pg~v~~~~~~~-~~~-~~--~---~~~-----~~~~~~~~~va~~~~~~~ 217 (238)
T PRK05786 150 YAVAKAGLAKAVEILASELLGRGIRVNGIAPTTISGDFEPE-RNW-KK--L---RKL-----GDDMAPPEDFAKVIIWLL 217 (238)
T ss_pred HHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCccCCCCCch-hhh-hh--h---ccc-----cCCCCCHHHHHHHHHHHh
Confidence 999999999888887654 48999999999999864211 000 00 0 000 012477899999999999
Q ss_pred cCCC---CCceEEEeCC
Q 017914 266 DKPS---AWNVYNVVDD 279 (364)
Q Consensus 266 ~~~~---~g~~~~i~~~ 279 (364)
..+. .|+.+.+.++
T Consensus 218 ~~~~~~~~g~~~~~~~~ 234 (238)
T PRK05786 218 TDEADWVDGVVIPVDGG 234 (238)
T ss_pred cccccCccCCEEEECCc
Confidence 7642 3677776544
|
|
| >PRK08340 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.56 E-value=5.6e-13 Score=116.98 Aligned_cols=210 Identities=12% Similarity=0.022 Sum_probs=129.3
Q ss_pred CeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhh----h-CCceEEEccCChhhH--Hh-------hccCcee
Q 017914 60 NRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELE----Q-SGFDVHLFNANETAL--MI-------LTTLKNY 124 (364)
Q Consensus 60 ~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~----~-~~~~~~~~D~~~~~~--~~-------~~~~d~v 124 (364)
|+||||| +|.||+.++++|+++|++|++++|+.+...... . .++.++.+|++|.+. .. +..+|++
T Consensus 1 m~vlItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~g~id~l 80 (259)
T PRK08340 1 MNVLVTASSRGIGFNVARELLKKGARVVISSRNEENLEKALKELKEYGEVYAVKADLSDKDDLKNLVKEAWELLGGIDAL 80 (259)
T ss_pred CeEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEcCCCCHHHHHHHHHHHHHhcCCCCEE
Confidence 6899999 899999999999999999999999876543321 1 357789999999663 22 2468999
Q ss_pred eEEEEecCCCC-CC-CChhh----hHHHH----------HHHHhh-cCCccEEEEEccceeecCCCCccccCCCCCCCCC
Q 017914 125 THLLVSIPPLE-GT-GDPML----KHGEL----------LRSTLM-NGHLQWLGYLSSTGVYGHSGGAWVDEDYPANPTT 187 (364)
Q Consensus 125 ~~~~~~~~~~~-~~-~~~~~----~~~~~----------l~~a~~-~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~ 187 (364)
+|+++...... .. ..... ....| ++..+. ..+..++|++||...+.. ..+..
T Consensus 81 i~naG~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~g~iv~isS~~~~~~-----------~~~~~ 149 (259)
T PRK08340 81 VWNAGNVRCEPCMLHEAGYSDWLEAALLHLVAPGYLTTLLIQAWLEKKMKGVLVYLSSVSVKEP-----------MPPLV 149 (259)
T ss_pred EECCCCCCCCccccccccHHHHHHHHhhcchHHHHHHHHHHHHHHhcCCCCEEEEEeCcccCCC-----------CCCch
Confidence 99887532111 11 11111 11111 122222 334568999998765321 12346
Q ss_pred hhHHHHHHHHHHHHHhhhhc---CCcEEEEEecceecCCCC-hHHHHHHhcCcccc----cccccCCcccccccHHHHHH
Q 017914 188 ELGRLRLSAEKGWLNLGRDL---GISAQVFRLGGIYGPGRS-SVDTIIKQLPLSEG----QKMRRARQYTSRIHVDDICQ 259 (364)
Q Consensus 188 ~Y~~sK~~~E~~~~~~~~~~---~~~~~ilRp~~v~g~~~~-~~~~~~~~~~~~~~----~~~~~~~~~~~~i~v~Dva~ 259 (364)
.|+.+|...+.+.+.++.+. |+++..|.||.+-.+... .+..+......... ..........-+...+|+|+
T Consensus 150 ~y~~sKaa~~~~~~~la~e~~~~gI~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~ 229 (259)
T PRK08340 150 LADVTRAGLVQLAKGVSRTYGGKGIRAYTVLLGSFDTPGARENLARIAEERGVSFEETWEREVLERTPLKRTGRWEELGS 229 (259)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCEEEEEeccCcccCccHHHHHHhhhhccCCchHHHHHHHHhccCCccCCCCHHHHHH
Confidence 79999999999999887653 789999999987655311 11110000000000 00000001122467899999
Q ss_pred HHHHHccCCC---CCceEEEeCCC
Q 017914 260 VLSASIDKPS---AWNVYNVVDDD 280 (364)
Q Consensus 260 ~~~~~l~~~~---~g~~~~i~~~~ 280 (364)
+++.++.... .|++..+.+|.
T Consensus 230 ~~~fL~s~~~~~itG~~i~vdgg~ 253 (259)
T PRK08340 230 LIAFLLSENAEYMLGSTIVFDGAM 253 (259)
T ss_pred HHHHHcCcccccccCceEeecCCc
Confidence 9999998643 37777777664
|
|
| >PRK07576 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.56 E-value=5.6e-13 Score=117.33 Aligned_cols=208 Identities=10% Similarity=-0.022 Sum_probs=127.4
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhh----hh--CCceEEEccCChhhH--Hhh-------cc
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKEL----EQ--SGFDVHLFNANETAL--MIL-------TT 120 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l----~~--~~~~~~~~D~~~~~~--~~~-------~~ 120 (364)
..+++||||| +|+||++++++|+++|++|++++|+.+..... .. .++.++.+|+++.+. ..+ ..
T Consensus 7 ~~~k~ilItGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~~~ 86 (264)
T PRK07576 7 FAGKNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQAGPEGLGVSADVRDYAAVEAAFAQIADEFGP 86 (264)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 4467999999 99999999999999999999999987654332 11 345778999998663 222 35
Q ss_pred CceeeEEEEecCCCCCCC----ChhhhHHH------HHHHHhh----cCCccEEEEEccceeecCCCCccccCCCCCCCC
Q 017914 121 LKNYTHLLVSIPPLEGTG----DPMLKHGE------LLRSTLM----NGHLQWLGYLSSTGVYGHSGGAWVDEDYPANPT 186 (364)
Q Consensus 121 ~d~v~~~~~~~~~~~~~~----~~~~~~~~------~l~~a~~----~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~ 186 (364)
+|+++|+++......... +....... ++..++. +.+ +++|++||...+.. ....
T Consensus 87 iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~~-g~iv~iss~~~~~~-----------~~~~ 154 (264)
T PRK07576 87 IDVLVSGAAGNFPAPAAGMSANGFKTVVDIDLLGTFNVLKAAYPLLRRPG-ASIIQISAPQAFVP-----------MPMQ 154 (264)
T ss_pred CCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CEEEEECChhhccC-----------CCCc
Confidence 799999886432211011 11111112 2222221 222 58999998654321 1133
Q ss_pred ChhHHHHHHHHHHHHHhhhh---cCCcEEEEEecceecCCCChHHHHHHhcCcccccccccCCcccccccHHHHHHHHHH
Q 017914 187 TELGRLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRSSVDTIIKQLPLSEGQKMRRARQYTSRIHVDDICQVLSA 263 (364)
Q Consensus 187 ~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~ 263 (364)
..|+.+|...|.+++.++.+ .+++++.++||.+.+... ...+........ ..........+...+|+|++++.
T Consensus 155 ~~Y~asK~a~~~l~~~la~e~~~~gi~v~~v~pg~~~~t~~--~~~~~~~~~~~~--~~~~~~~~~~~~~~~dva~~~~~ 230 (264)
T PRK07576 155 AHVCAAKAGVDMLTRTLALEWGPEGIRVNSIVPGPIAGTEG--MARLAPSPELQA--AVAQSVPLKRNGTKQDIANAALF 230 (264)
T ss_pred cHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecccccCcHH--HhhcccCHHHHH--HHHhcCCCCCCCCHHHHHHHHHH
Confidence 67999999999999987644 478999999998864221 000000000000 00000011234778999999999
Q ss_pred HccCCC---CCceEEEeCCC
Q 017914 264 SIDKPS---AWNVYNVVDDD 280 (364)
Q Consensus 264 ~l~~~~---~g~~~~i~~~~ 280 (364)
++.... .|+.+.+.++.
T Consensus 231 l~~~~~~~~~G~~~~~~gg~ 250 (264)
T PRK07576 231 LASDMASYITGVVLPVDGGW 250 (264)
T ss_pred HcChhhcCccCCEEEECCCc
Confidence 997642 37777776653
|
|
| >PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.55 E-value=4.5e-13 Score=117.68 Aligned_cols=204 Identities=12% Similarity=-0.005 Sum_probs=125.4
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeC-chhhhh----hh---hCCceEEEccCChhhH--Hh-------h
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTN-VMKKKE----LE---QSGFDVHLFNANETAL--MI-------L 118 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~-~~~~~~----l~---~~~~~~~~~D~~~~~~--~~-------~ 118 (364)
..+++||||| +|.||++++++|+++|++|+++.|+ .+.... +. ...+.++.+|++|++. .. +
T Consensus 6 l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 85 (260)
T PRK08416 6 MKGKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDLEQKYGIKAKAYPLNILEPETYKELFKKIDEDF 85 (260)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhc
Confidence 4568999999 9999999999999999999988764 332222 21 1246789999999763 11 2
Q ss_pred ccCceeeEEEEecCCC-----CCCCC-hhh----hHHHH----------HHHHhhcCCccEEEEEccceeecCCCCcccc
Q 017914 119 TTLKNYTHLLVSIPPL-----EGTGD-PML----KHGEL----------LRSTLMNGHLQWLGYLSSTGVYGHSGGAWVD 178 (364)
Q Consensus 119 ~~~d~v~~~~~~~~~~-----~~~~~-~~~----~~~~~----------l~~a~~~~~~~r~v~~Ss~~vy~~~~~~~~~ 178 (364)
..+|.++|+++..... ....+ ... ....| ++..++..+.+++|++||...+...
T Consensus 86 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~------ 159 (260)
T PRK08416 86 DRVDFFISNAIISGRAVVGGYTKFMRLKPKGLNNIYTATVNAFVVGAQEAAKRMEKVGGGSIISLSSTGNLVYI------ 159 (260)
T ss_pred CCccEEEECccccccccccccCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHhhhccCCEEEEEEeccccccCC------
Confidence 3578899988643211 11100 001 11112 2222334445689999986432111
Q ss_pred CCCCCCCCChhHHHHHHHHHHHHHhhhhc---CCcEEEEEecceecCCCChH---HHHHHhcCcccccccccCCcccccc
Q 017914 179 EDYPANPTTELGRLRLSAEKGWLNLGRDL---GISAQVFRLGGIYGPGRSSV---DTIIKQLPLSEGQKMRRARQYTSRI 252 (364)
Q Consensus 179 E~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilRp~~v~g~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~i 252 (364)
.....|+.+|.+.+.+++.++.+. |++++.|.||.+-.+....+ ...... ..... ...-+.
T Consensus 160 -----~~~~~Y~asK~a~~~~~~~la~el~~~gi~v~~v~PG~i~T~~~~~~~~~~~~~~~--~~~~~------~~~r~~ 226 (260)
T PRK08416 160 -----ENYAGHGTSKAAVETMVKYAATELGEKNIRVNAVSGGPIDTDALKAFTNYEEVKAK--TEELS------PLNRMG 226 (260)
T ss_pred -----CCcccchhhHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccChhhhhccCCHHHHHH--HHhcC------CCCCCC
Confidence 123479999999999999987654 89999999998754321100 001000 00000 011246
Q ss_pred cHHHHHHHHHHHccCC---CCCceEEEeCC
Q 017914 253 HVDDICQVLSASIDKP---SAWNVYNVVDD 279 (364)
Q Consensus 253 ~v~Dva~~~~~~l~~~---~~g~~~~i~~~ 279 (364)
..+|+|.+++.++... -.|+.+.+.++
T Consensus 227 ~p~~va~~~~~l~~~~~~~~~G~~i~vdgg 256 (260)
T PRK08416 227 QPEDLAGACLFLCSEKASWLTGQTIVVDGG 256 (260)
T ss_pred CHHHHHHHHHHHcChhhhcccCcEEEEcCC
Confidence 7999999999998754 23777777655
|
|
| >PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.55 E-value=1.4e-13 Score=121.31 Aligned_cols=209 Identities=7% Similarity=-0.002 Sum_probs=128.4
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCChhhH--Hhh-------ccCceeeE
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETAL--MIL-------TTLKNYTH 126 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~--~~~-------~~~d~v~~ 126 (364)
..++++|||| +|+||+++++.|+++|++|++++|+..... ..++.++.+|++|.+. ..+ ..+|+++|
T Consensus 7 l~~k~vlItG~s~gIG~~la~~l~~~G~~v~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~ 83 (266)
T PRK06171 7 LQGKIIIVTGGSSGIGLAIVKELLANGANVVNADIHGGDGQ---HENYQFVPTDVSSAEEVNHTVAEIIEKFGRIDGLVN 83 (266)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCccccc---cCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 4468999999 999999999999999999999999765432 2467889999999763 221 35799999
Q ss_pred EEEecCCCCCC---------CChhh----hHH------HHHHHHh----hcCCccEEEEEccceeecCCCCccccCCCCC
Q 017914 127 LLVSIPPLEGT---------GDPML----KHG------ELLRSTL----MNGHLQWLGYLSSTGVYGHSGGAWVDEDYPA 183 (364)
Q Consensus 127 ~~~~~~~~~~~---------~~~~~----~~~------~~l~~a~----~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~ 183 (364)
+++........ ..... ... .++..++ .+.+..++|++||...+...
T Consensus 84 ~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~----------- 152 (266)
T PRK06171 84 NAGINIPRLLVDEKDPAGKYELNEAAFDKMFNINQKGVFLMSQAVARQMVKQHDGVIVNMSSEAGLEGS----------- 152 (266)
T ss_pred CCcccCCccccccccccccccCCHHHHHHHHhhhchhHHHHHHHHHHHHHhcCCcEEEEEccccccCCC-----------
Confidence 98754321100 00001 111 1222222 23344689999987543221
Q ss_pred CCCChhHHHHHHHHHHHHHhhhh---cCCcEEEEEecceec-CCCC-hHHHHHHhc-Cc--cc-cccccc--CCcccccc
Q 017914 184 NPTTELGRLRLSAEKGWLNLGRD---LGISAQVFRLGGIYG-PGRS-SVDTIIKQL-PL--SE-GQKMRR--ARQYTSRI 252 (364)
Q Consensus 184 ~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g-~~~~-~~~~~~~~~-~~--~~-~~~~~~--~~~~~~~i 252 (364)
.....|+.+|...+.+++.++.+ .|+++++++||.+.. .... ......... .. .. ...... .....-+.
T Consensus 153 ~~~~~Y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~ 232 (266)
T PRK06171 153 EGQSCYAATKAALNSFTRSWAKELGKHNIRVVGVAPGILEATGLRTPEYEEALAYTRGITVEQLRAGYTKTSTIPLGRSG 232 (266)
T ss_pred CCCchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeccccccCCCcChhhhhhhccccCCCHHHHHhhhcccccccCCCCC
Confidence 12367999999999999888754 489999999998742 1111 110000000 00 00 000000 00112246
Q ss_pred cHHHHHHHHHHHccCCC---CCceEEEeCC
Q 017914 253 HVDDICQVLSASIDKPS---AWNVYNVVDD 279 (364)
Q Consensus 253 ~v~Dva~~~~~~l~~~~---~g~~~~i~~~ 279 (364)
..+|+|.++..++.... .|+++++.+|
T Consensus 233 ~~~eva~~~~fl~s~~~~~itG~~i~vdgg 262 (266)
T PRK06171 233 KLSEVADLVCYLLSDRASYITGVTTNIAGG 262 (266)
T ss_pred CHHHhhhheeeeeccccccceeeEEEecCc
Confidence 78999999999987543 3788887665
|
|
| >PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.54 E-value=1.3e-12 Score=114.22 Aligned_cols=204 Identities=8% Similarity=-0.059 Sum_probs=127.4
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchh--hhhhhh--CCceEEEccCChhhH--Hhh-------ccCc
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMK--KKELEQ--SGFDVHLFNANETAL--MIL-------TTLK 122 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~--~~~l~~--~~~~~~~~D~~~~~~--~~~-------~~~d 122 (364)
..++++|||| +|.||++++++|.++|++|++++|.... ...+.. ..+..+.+|++|.+. ..+ ..+|
T Consensus 8 l~~k~~lItG~~~gIG~a~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~D 87 (253)
T PRK08993 8 LEGKVAVVTGCDTGLGQGMALGLAEAGCDIVGINIVEPTETIEQVTALGRRFLSLTADLRKIDGIPALLERAVAEFGHID 87 (253)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEecCcchHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCCC
Confidence 4468999999 9999999999999999999988775322 122221 346788999998653 222 3589
Q ss_pred eeeEEEEecCCCCCC----CChhhhHHHHHHH------H----hhcCC-ccEEEEEccceeecCCCCccccCCCCCCCCC
Q 017914 123 NYTHLLVSIPPLEGT----GDPMLKHGELLRS------T----LMNGH-LQWLGYLSSTGVYGHSGGAWVDEDYPANPTT 187 (364)
Q Consensus 123 ~v~~~~~~~~~~~~~----~~~~~~~~~~l~~------a----~~~~~-~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~ 187 (364)
+++|+++........ .+.......|+.. + +...+ -.++|++||...+.... ...
T Consensus 88 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~-----------~~~ 156 (253)
T PRK08993 88 ILVNNAGLIRREDAIEFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQGNGGKIINIASMLSFQGGI-----------RVP 156 (253)
T ss_pred EEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEECchhhccCCC-----------CCc
Confidence 999998764322111 1111112222222 2 22222 25899999976554322 124
Q ss_pred hhHHHHHHHHHHHHHhhhh---cCCcEEEEEecceecCCCChHH---HHHHhcCcccccccccCCcccccccHHHHHHHH
Q 017914 188 ELGRLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRSSVD---TIIKQLPLSEGQKMRRARQYTSRIHVDDICQVL 261 (364)
Q Consensus 188 ~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~ 261 (364)
.|+.+|.+.|.+.+.++.+ .|++++.++||.+-.+....+. ..... ... ... ..-+...+|+|+++
T Consensus 157 ~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pG~v~T~~~~~~~~~~~~~~~--~~~--~~p----~~r~~~p~eva~~~ 228 (253)
T PRK08993 157 SYTASKSGVMGVTRLMANEWAKHNINVNAIAPGYMATNNTQQLRADEQRSAE--ILD--RIP----AGRWGLPSDLMGPV 228 (253)
T ss_pred chHHHHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccCcchhhhccchHHHHH--HHh--cCC----CCCCcCHHHHHHHH
Confidence 7999999999999888755 5899999999998665321110 00000 000 000 11246789999999
Q ss_pred HHHccCCC---CCceEEEeCC
Q 017914 262 SASIDKPS---AWNVYNVVDD 279 (364)
Q Consensus 262 ~~~l~~~~---~g~~~~i~~~ 279 (364)
+.++.... .|+.+.+.+|
T Consensus 229 ~~l~s~~~~~~~G~~~~~dgg 249 (253)
T PRK08993 229 VFLASSASDYINGYTIAVDGG 249 (253)
T ss_pred HHHhCccccCccCcEEEECCC
Confidence 99998653 3777776554
|
|
| >PRK06953 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.54 E-value=6.2e-13 Score=113.92 Aligned_cols=188 Identities=14% Similarity=0.120 Sum_probs=124.5
Q ss_pred CCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCChhhH--H---hhc--cCceeeEEEEe
Q 017914 59 PNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETAL--M---ILT--TLKNYTHLLVS 130 (364)
Q Consensus 59 ~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~--~---~~~--~~d~v~~~~~~ 130 (364)
|++++||| +|+||++++++|+++|++|++++|+.+..+.+...+++++.+|+++.+. . .+. .+|.++|+++.
T Consensus 1 ~~~vlvtG~sg~iG~~la~~L~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~d~vi~~ag~ 80 (222)
T PRK06953 1 MKTVLIVGASRGIGREFVRQYRADGWRVIATARDAAALAALQALGAEALALDVADPASVAGLAWKLDGEALDAAVYVAGV 80 (222)
T ss_pred CceEEEEcCCCchhHHHHHHHHhCCCEEEEEECCHHHHHHHHhccceEEEecCCCHHHHHHHHHHhcCCCCCEEEECCCc
Confidence 46899999 9999999999999999999999998877666665677889999999763 2 122 47999999876
Q ss_pred cCCCCC-C-----CChhhhHHH------HHHHHhh---cCCccEEEEEccc-eeecCCCCccccCCCCCCCCChhHHHHH
Q 017914 131 IPPLEG-T-----GDPMLKHGE------LLRSTLM---NGHLQWLGYLSST-GVYGHSGGAWVDEDYPANPTTELGRLRL 194 (364)
Q Consensus 131 ~~~~~~-~-----~~~~~~~~~------~l~~a~~---~~~~~r~v~~Ss~-~vy~~~~~~~~~E~~~~~~~~~Y~~sK~ 194 (364)
...... . .+....... ++..++. .....++|++||. ++++... ..+...|+.+|.
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~---------~~~~~~Y~~sK~ 151 (222)
T PRK06953 81 YGPRTEGVEPITREDFDAVMHTNVLGPMQLLPILLPLVEAAGGVLAVLSSRMGSIGDAT---------GTTGWLYRASKA 151 (222)
T ss_pred ccCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHhhhccCCeEEEEcCccccccccc---------CCCccccHHhHH
Confidence 532211 0 111111122 2333332 1123478898875 3443211 112236999999
Q ss_pred HHHHHHHHhhhhc-CCcEEEEEecceecCCCChHHHHHHhcCcccccccccCCcccccccHHHHHHHHHHHccCCCC---
Q 017914 195 SAEKGWLNLGRDL-GISAQVFRLGGIYGPGRSSVDTIIKQLPLSEGQKMRRARQYTSRIHVDDICQVLSASIDKPSA--- 270 (364)
Q Consensus 195 ~~E~~~~~~~~~~-~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~~--- 270 (364)
..+.+++.++.+. +++++.++||.+..+... . ...+..++.++.+..++.....
T Consensus 152 a~~~~~~~~~~~~~~i~v~~v~Pg~i~t~~~~------------~----------~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (222)
T PRK06953 152 ALNDALRAASLQARHATCIALHPGWVRTDMGG------------A----------QAALDPAQSVAGMRRVIAQATRRDN 209 (222)
T ss_pred HHHHHHHHHhhhccCcEEEEECCCeeecCCCC------------C----------CCCCCHHHHHHHHHHHHHhcCcccC
Confidence 9999999887554 789999999988654211 0 0125678999999888765432
Q ss_pred CceEEEe
Q 017914 271 WNVYNVV 277 (364)
Q Consensus 271 g~~~~i~ 277 (364)
+..|...
T Consensus 210 ~~~~~~~ 216 (222)
T PRK06953 210 GRFFQYD 216 (222)
T ss_pred ceEEeeC
Confidence 4455543
|
|
| >PRK09072 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.54 E-value=5.1e-13 Score=117.55 Aligned_cols=190 Identities=13% Similarity=0.011 Sum_probs=122.2
Q ss_pred CCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhh-----CCceEEEccCChhhH--Hh------hccCce
Q 017914 58 SPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQ-----SGFDVHLFNANETAL--MI------LTTLKN 123 (364)
Q Consensus 58 ~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~-----~~~~~~~~D~~~~~~--~~------~~~~d~ 123 (364)
.+++||||| +|+||++++++|+++|++|++++|+.+....+.. .++.++.+|++|.+. .. +..+|.
T Consensus 4 ~~~~vlItG~s~~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~id~ 83 (263)
T PRK09072 4 KDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKLEALAARLPYPGRHRWVVADLTSEAGREAVLARAREMGGINV 83 (263)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHhcCCCCE
Confidence 457899999 9999999999999999999999998766544422 367889999999663 11 245799
Q ss_pred eeEEEEecCCCCCCCCh----hhhHHHH------HHHHh----hcCCccEEEEEccceeecCCCCccccCCCCCCCCChh
Q 017914 124 YTHLLVSIPPLEGTGDP----MLKHGEL------LRSTL----MNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANPTTEL 189 (364)
Q Consensus 124 v~~~~~~~~~~~~~~~~----~~~~~~~------l~~a~----~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y 189 (364)
++|+++........... ......| +..++ ...+..++|++||...+... .....|
T Consensus 84 lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~-----------~~~~~Y 152 (263)
T PRK09072 84 LINNAGVNHFALLEDQDPEAIERLLALNLTAPMQLTRALLPLLRAQPSAMVVNVGSTFGSIGY-----------PGYASY 152 (263)
T ss_pred EEECCCCCCccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEecChhhCcCC-----------CCccHH
Confidence 99998754321111111 1111122 22222 23444679998875322111 123579
Q ss_pred HHHHHHHHHHHHHhhhh---cCCcEEEEEecceecCCCChHHHHHHhcCcccccccccCCcccccccHHHHHHHHHHHcc
Q 017914 190 GRLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRSSVDTIIKQLPLSEGQKMRRARQYTSRIHVDDICQVLSASID 266 (364)
Q Consensus 190 ~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~ 266 (364)
+.+|...+.+++.++.+ .++.++.+.||.+..+.... ... ... .. ....+..++|+|++++.+++
T Consensus 153 ~~sK~a~~~~~~~l~~~~~~~~i~v~~v~Pg~~~t~~~~~---~~~--~~~--~~-----~~~~~~~~~~va~~i~~~~~ 220 (263)
T PRK09072 153 CASKFALRGFSEALRRELADTGVRVLYLAPRATRTAMNSE---AVQ--ALN--RA-----LGNAMDDPEDVAAAVLQAIE 220 (263)
T ss_pred HHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccccchhh---hcc--ccc--cc-----ccCCCCCHHHHHHHHHHHHh
Confidence 99999998888877643 47999999999876543111 000 000 00 01134678999999999999
Q ss_pred CCCC
Q 017914 267 KPSA 270 (364)
Q Consensus 267 ~~~~ 270 (364)
+...
T Consensus 221 ~~~~ 224 (263)
T PRK09072 221 KERA 224 (263)
T ss_pred CCCC
Confidence 7643
|
|
| >TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase | Back alignment and domain information |
|---|
Probab=99.52 E-value=5.2e-13 Score=117.42 Aligned_cols=210 Identities=10% Similarity=-0.021 Sum_probs=127.1
Q ss_pred CCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhh---CCceEEEccCChhhH--Hh-------hccCcee
Q 017914 58 SPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQ---SGFDVHLFNANETAL--MI-------LTTLKNY 124 (364)
Q Consensus 58 ~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~---~~~~~~~~D~~~~~~--~~-------~~~~d~v 124 (364)
.+++++||| +|+||++++++|+++|++|++++|+.+..+.+.. ..+..+.+|++|.+. .. +..+|.+
T Consensus 4 ~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l 83 (262)
T TIGR03325 4 KGEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAAGLQELEAAHGDAVVGVEGDVRSLDDHKEAVARCVAAFGKIDCL 83 (262)
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhcCCceEEEEeccCCHHHHHHHHHHHHHHhCCCCEE
Confidence 458999999 9999999999999999999999998766555432 246788999998653 22 2467999
Q ss_pred eEEEEecCCCCC---CCC-----hh-hhHH------HHHHHHhh----cCCccEEEEEccceeecCCCCccccCCCCCCC
Q 017914 125 THLLVSIPPLEG---TGD-----PM-LKHG------ELLRSTLM----NGHLQWLGYLSSTGVYGHSGGAWVDEDYPANP 185 (364)
Q Consensus 125 ~~~~~~~~~~~~---~~~-----~~-~~~~------~~l~~a~~----~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~ 185 (364)
+|+++....... ... .+ .... .++..++. ..+ .++|++||...+... ..
T Consensus 84 i~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-g~iv~~sS~~~~~~~-----------~~ 151 (262)
T TIGR03325 84 IPNAGIWDYSTALVDIPDDRIDEAFDEVFHINVKGYLLAVKAALPALVASR-GSVIFTISNAGFYPN-----------GG 151 (262)
T ss_pred EECCCCCccCCccccCCchhhhHHHHHhheeecHhHHHHHHHHHHHHhhcC-CCEEEEeccceecCC-----------CC
Confidence 999875321111 110 00 1111 12222221 222 478888775433111 12
Q ss_pred CChhHHHHHHHHHHHHHhhhhc--CCcEEEEEecceecCCCChHHHHHHhc---CcccccccccCCcccccccHHHHHHH
Q 017914 186 TTELGRLRLSAEKGWLNLGRDL--GISAQVFRLGGIYGPGRSSVDTIIKQL---PLSEGQKMRRARQYTSRIHVDDICQV 260 (364)
Q Consensus 186 ~~~Y~~sK~~~E~~~~~~~~~~--~~~~~ilRp~~v~g~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~i~v~Dva~~ 260 (364)
...|+.+|...+.+++.++.+. .++++.|.||.+..+............ ...............-+...+|+|++
T Consensus 152 ~~~Y~~sKaa~~~l~~~la~e~~~~irvn~i~PG~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~eva~~ 231 (262)
T TIGR03325 152 GPLYTAAKHAVVGLVKELAFELAPYVRVNGVAPGGMSSDLRGPKSLGMADKSISTVPLGDMLKSVLPIGRMPDAEEYTGA 231 (262)
T ss_pred CchhHHHHHHHHHHHHHHHHhhccCeEEEEEecCCCcCCCccccccccccccccccchhhhhhhcCCCCCCCChHHhhhh
Confidence 3579999999999999987664 388999999998765321100000000 00000000000011224678999999
Q ss_pred HHHHccCCC----CCceEEEeCC
Q 017914 261 LSASIDKPS----AWNVYNVVDD 279 (364)
Q Consensus 261 ~~~~l~~~~----~g~~~~i~~~ 279 (364)
++.++.... .|+++.+.+|
T Consensus 232 ~~~l~s~~~~~~~tG~~i~vdgg 254 (262)
T TIGR03325 232 YVFFATRGDTVPATGAVLNYDGG 254 (262)
T ss_pred eeeeecCCCcccccceEEEecCC
Confidence 988887532 3778877665
|
Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase. |
| >PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.52 E-value=1.7e-12 Score=113.16 Aligned_cols=194 Identities=13% Similarity=0.005 Sum_probs=123.4
Q ss_pred CCCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhh----h---CCceEEEccCCh--hh-H--------H
Q 017914 56 WQSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELE----Q---SGFDVHLFNANE--TA-L--------M 116 (364)
Q Consensus 56 ~~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~----~---~~~~~~~~D~~~--~~-~--------~ 116 (364)
...+++||||| +|+||.+++++|+++|++|++++|+.+....+. . .++.++.+|+++ .+ . .
T Consensus 9 ~~~~k~vlItG~~g~iG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 88 (247)
T PRK08945 9 LLKDRIILVTGAGDGIGREAALTYARHGATVILLGRTEEKLEAVYDEIEAAGGPQPAIIPLDLLTATPQNYQQLADTIEE 88 (247)
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHhcCCCCceEEEecccCCCHHHHHHHHHHHHH
Confidence 34568999999 999999999999999999999999876543332 1 245677888863 22 1 1
Q ss_pred hhccCceeeEEEEecCCCCCCCC-----hhhhHHH----------HHHHHhhcCCccEEEEEccceeecCCCCccccCCC
Q 017914 117 ILTTLKNYTHLLVSIPPLEGTGD-----PMLKHGE----------LLRSTLMNGHLQWLGYLSSTGVYGHSGGAWVDEDY 181 (364)
Q Consensus 117 ~~~~~d~v~~~~~~~~~~~~~~~-----~~~~~~~----------~l~~a~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~ 181 (364)
.+..+|.|+|+++.........+ ....... .+...+.+.+.++||++||.......
T Consensus 89 ~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~--------- 159 (247)
T PRK08945 89 QFGRLDGVLHNAGLLGELGPMEQQDPEVWQDVMQVNVNATFMLTQALLPLLLKSPAASLVFTSSSVGRQGR--------- 159 (247)
T ss_pred HhCCCCEEEECCcccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEEccHhhcCCC---------
Confidence 22468999999876443221111 1111112 22222345567899999986432111
Q ss_pred CCCCCChhHHHHHHHHHHHHHhhhhc---CCcEEEEEecceecCCCChHHHHHHhcCcccccccccCCcccccccHHHHH
Q 017914 182 PANPTTELGRLRLSAEKGWLNLGRDL---GISAQVFRLGGIYGPGRSSVDTIIKQLPLSEGQKMRRARQYTSRIHVDDIC 258 (364)
Q Consensus 182 ~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva 258 (364)
.....|+.+|.+.|.+++.++... ++++++++||.+-.+.... . .... . ...+...+|++
T Consensus 160 --~~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~~~~v~pg~v~t~~~~~---~-----~~~~-~------~~~~~~~~~~~ 222 (247)
T PRK08945 160 --ANWGAYAVSKFATEGMMQVLADEYQGTNLRVNCINPGGTRTAMRAS---A-----FPGE-D------PQKLKTPEDIM 222 (247)
T ss_pred --CCCcccHHHHHHHHHHHHHHHHHhcccCEEEEEEecCCccCcchhh---h-----cCcc-c------ccCCCCHHHHH
Confidence 123579999999999998876543 6889999999875542100 0 0000 0 11246789999
Q ss_pred HHHHHHccCCC---CCceEE
Q 017914 259 QVLSASIDKPS---AWNVYN 275 (364)
Q Consensus 259 ~~~~~~l~~~~---~g~~~~ 275 (364)
+.++.++.... .|+++.
T Consensus 223 ~~~~~~~~~~~~~~~g~~~~ 242 (247)
T PRK08945 223 PLYLYLMGDDSRRKNGQSFD 242 (247)
T ss_pred HHHHHHhCccccccCCeEEe
Confidence 99999886543 255543
|
|
| >PRK06125 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.52 E-value=2.1e-12 Score=113.30 Aligned_cols=209 Identities=11% Similarity=0.010 Sum_probs=129.2
Q ss_pred CCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhh-------hCCceEEEccCChhhH-----HhhccCcee
Q 017914 58 SPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELE-------QSGFDVHLFNANETAL-----MILTTLKNY 124 (364)
Q Consensus 58 ~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~-------~~~~~~~~~D~~~~~~-----~~~~~~d~v 124 (364)
.+++||||| +|.||+++++.|+++|++|++++|+.++...+. ..++.++.+|++|.+. ..+..+|.+
T Consensus 6 ~~k~vlItG~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~g~id~l 85 (259)
T PRK06125 6 AGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAAHGVDVAVHALDLSSPEAREQLAAEAGDIDIL 85 (259)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHhCCCCEE
Confidence 458999999 899999999999999999999999876554422 1246788999999664 223568999
Q ss_pred eEEEEecCCCCCCCCh----hhhHHHH----------HHHHhhcCCccEEEEEccceeecCCCCccccCCCCCCCCChhH
Q 017914 125 THLLVSIPPLEGTGDP----MLKHGEL----------LRSTLMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANPTTELG 190 (364)
Q Consensus 125 ~~~~~~~~~~~~~~~~----~~~~~~~----------l~~a~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~ 190 (364)
+|+++........... ......| +...+.+.+..++|++||..... +......|+
T Consensus 86 v~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~-----------~~~~~~~y~ 154 (259)
T PRK06125 86 VNNAGAIPGGGLDDVDDAAWRAGWELKVFGYIDLTRLAYPRMKARGSGVIVNVIGAAGEN-----------PDADYICGS 154 (259)
T ss_pred EECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEecCccccC-----------CCCCchHhH
Confidence 9988754321111111 1111122 22222334345899998753211 111235689
Q ss_pred HHHHHHHHHHHHhhh---hcCCcEEEEEecceecCCCChHHHHHHhc---Cccccc---ccccCCcccccccHHHHHHHH
Q 017914 191 RLRLSAEKGWLNLGR---DLGISAQVFRLGGIYGPGRSSVDTIIKQL---PLSEGQ---KMRRARQYTSRIHVDDICQVL 261 (364)
Q Consensus 191 ~sK~~~E~~~~~~~~---~~~~~~~ilRp~~v~g~~~~~~~~~~~~~---~~~~~~---~~~~~~~~~~~i~v~Dva~~~ 261 (364)
.+|...+.+.+.++. ..|++++.+.||.+..+. ...+.... .+.... .........-+..++|+|+++
T Consensus 155 ask~al~~~~~~la~e~~~~gi~v~~i~PG~v~t~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~ 231 (259)
T PRK06125 155 AGNAALMAFTRALGGKSLDDGVRVVGVNPGPVATDR---MLTLLKGRARAELGDESRWQELLAGLPLGRPATPEEVADLV 231 (259)
T ss_pred HHHHHHHHHHHHHHHHhCccCeEEEEEecCccccHH---HHHHHHhhhhcccCCHHHHHHHhccCCcCCCcCHHHHHHHH
Confidence 999999999988764 348999999999886542 11111100 000000 000000012246799999999
Q ss_pred HHHccCC---CCCceEEEeCCC
Q 017914 262 SASIDKP---SAWNVYNVVDDD 280 (364)
Q Consensus 262 ~~~l~~~---~~g~~~~i~~~~ 280 (364)
+.++... ..|+.+.+.+|.
T Consensus 232 ~~l~~~~~~~~~G~~i~vdgg~ 253 (259)
T PRK06125 232 AFLASPRSGYTSGTVVTVDGGI 253 (259)
T ss_pred HHHcCchhccccCceEEecCCe
Confidence 9998754 237788887663
|
|
| >PRK08936 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.52 E-value=2.8e-12 Score=112.72 Aligned_cols=204 Identities=10% Similarity=-0.069 Sum_probs=126.9
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchh-hhh----hhh--CCceEEEccCChhhH--Hhh-------c
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMK-KKE----LEQ--SGFDVHLFNANETAL--MIL-------T 119 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~-~~~----l~~--~~~~~~~~D~~~~~~--~~~-------~ 119 (364)
..++++|||| +|.||++++++|.++|+.|++..|+..+ ... +.. .++.++.+|++|.+. ..+ .
T Consensus 5 ~~~k~~lItGa~~gIG~~ia~~l~~~G~~vvi~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g 84 (261)
T PRK08936 5 LEGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKKAGGEAIAVKGDVTVESDVVNLIQTAVKEFG 84 (261)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcC
Confidence 4568999999 9999999999999999999988885432 221 211 346688999999663 222 3
Q ss_pred cCceeeEEEEecCCCCCCCC----hhhhHHHHH----------HHHhhcCC-ccEEEEEccceeecCCCCccccCCCCCC
Q 017914 120 TLKNYTHLLVSIPPLEGTGD----PMLKHGELL----------RSTLMNGH-LQWLGYLSSTGVYGHSGGAWVDEDYPAN 184 (364)
Q Consensus 120 ~~d~v~~~~~~~~~~~~~~~----~~~~~~~~l----------~~a~~~~~-~~r~v~~Ss~~vy~~~~~~~~~E~~~~~ 184 (364)
.+|.++|+++.......... .......|+ +..+.+.+ -.++|++||...+ .+..
T Consensus 85 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~g~iv~~sS~~~~-----------~~~~ 153 (261)
T PRK08936 85 TLDVMINNAGIENAVPSHEMSLEDWNKVINTNLTGAFLGSREAIKYFVEHDIKGNIINMSSVHEQ-----------IPWP 153 (261)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcccccc-----------CCCC
Confidence 57999999875443221111 111222332 22233333 3589999985422 1222
Q ss_pred CCChhHHHHHHHHHHHHHhhhh---cCCcEEEEEecceecCCCC-hH--HHHHHhcCcccccccccCCcccccccHHHHH
Q 017914 185 PTTELGRLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRS-SV--DTIIKQLPLSEGQKMRRARQYTSRIHVDDIC 258 (364)
Q Consensus 185 ~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva 258 (364)
+...|+.+|.+.+.+.+.++.+ .|+++++|+||.+..+... .+ ...... +... .....+...+|++
T Consensus 154 ~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~--~~~~------~~~~~~~~~~~va 225 (261)
T PRK08936 154 LFVHYAASKGGVKLMTETLAMEYAPKGIRVNNIGPGAINTPINAEKFADPKQRAD--VESM------IPMGYIGKPEEIA 225 (261)
T ss_pred CCcccHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECcCCCCccccccCCHHHHHH--HHhc------CCCCCCcCHHHHH
Confidence 4467999999888888777543 4899999999998766421 10 000000 0000 0112246789999
Q ss_pred HHHHHHccCCC---CCceEEEeCC
Q 017914 259 QVLSASIDKPS---AWNVYNVVDD 279 (364)
Q Consensus 259 ~~~~~~l~~~~---~g~~~~i~~~ 279 (364)
++++.++.... .|..+.+.++
T Consensus 226 ~~~~~l~s~~~~~~~G~~i~~d~g 249 (261)
T PRK08936 226 AVAAWLASSEASYVTGITLFADGG 249 (261)
T ss_pred HHHHHHcCcccCCccCcEEEECCC
Confidence 99999987643 3666666555
|
|
| >PRK05854 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.52 E-value=4.4e-13 Score=120.80 Aligned_cols=166 Identities=15% Similarity=0.069 Sum_probs=111.4
Q ss_pred CCCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhh----hh----CCceEEEccCChhhH--Hh-------
Q 017914 56 WQSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKEL----EQ----SGFDVHLFNANETAL--MI------- 117 (364)
Q Consensus 56 ~~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l----~~----~~~~~~~~D~~~~~~--~~------- 117 (364)
...+++++||| +|+||.+++++|+++|++|+++.|+.++.... .. ..+.++.+|++|.+. ..
T Consensus 11 ~l~gk~~lITGas~GIG~~~a~~La~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~~~~~~~~~ 90 (313)
T PRK05854 11 DLSGKRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSLASVAALGEQLRAE 90 (313)
T ss_pred ccCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCHHHHHHHHHHHHHh
Confidence 45578999999 99999999999999999999999987654332 11 257789999999664 11
Q ss_pred hccCceeeEEEEecCCCC---CCCChhhhHHHHHHH----------HhhcCCccEEEEEccceee-cCCCCccccCCCCC
Q 017914 118 LTTLKNYTHLLVSIPPLE---GTGDPMLKHGELLRS----------TLMNGHLQWLGYLSSTGVY-GHSGGAWVDEDYPA 183 (364)
Q Consensus 118 ~~~~d~v~~~~~~~~~~~---~~~~~~~~~~~~l~~----------a~~~~~~~r~v~~Ss~~vy-~~~~~~~~~E~~~~ 183 (364)
...+|.++|+++...... ..++.......|++. .+++. ..|+|++||...+ +........++.+.
T Consensus 91 ~~~iD~li~nAG~~~~~~~~~t~~~~e~~~~vN~~g~~~l~~~llp~l~~~-~~riv~vsS~~~~~~~~~~~~~~~~~~~ 169 (313)
T PRK05854 91 GRPIHLLINNAGVMTPPERQTTADGFELQFGTNHLGHFALTAHLLPLLRAG-RARVTSQSSIAARRGAINWDDLNWERSY 169 (313)
T ss_pred CCCccEEEECCccccCCccccCcccHHHHhhhhhHHHHHHHHHHHHHHHhC-CCCeEEEechhhcCCCcCcccccccccC
Confidence 134799999987654321 111122222223322 22232 4589999887543 22222223334444
Q ss_pred CCCChhHHHHHHHHHHHHHhhhh-----cCCcEEEEEecceecC
Q 017914 184 NPTTELGRLRLSAEKGWLNLGRD-----LGISAQVFRLGGIYGP 222 (364)
Q Consensus 184 ~~~~~Y~~sK~~~E~~~~~~~~~-----~~~~~~ilRp~~v~g~ 222 (364)
.+...|+.+|.+.+.+.++++++ .|+.++.+.||.+...
T Consensus 170 ~~~~~Y~~SK~a~~~~~~~la~~~~~~~~gI~v~~v~PG~v~T~ 213 (313)
T PRK05854 170 AGMRAYSQSKIAVGLFALELDRRSRAAGWGITSNLAHPGVAPTN 213 (313)
T ss_pred cchhhhHHHHHHHHHHHHHHHHHhhcCCCCeEEEEEecceeccC
Confidence 56678999999999999988653 4799999999988654
|
|
| >PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.51 E-value=3.5e-12 Score=111.74 Aligned_cols=200 Identities=9% Similarity=0.019 Sum_probs=123.8
Q ss_pred CCCCeEEEEc-CC--hhhHHHHHHHHhCCCEEEEEEeCc-----------hhh----hhhhh--CCceEEEccCChhhH-
Q 017914 57 QSPNRMLILG-MG--FVGRIFAEKIKNQGWVVSGTCTNV-----------MKK----KELEQ--SGFDVHLFNANETAL- 115 (364)
Q Consensus 57 ~~~~~vlVtG-tG--~iG~~l~~~L~~~g~~V~~~~r~~-----------~~~----~~l~~--~~~~~~~~D~~~~~~- 115 (364)
..+++||||| +| .||.+++++|+++|++|++..|.. ... ..+.. ..+.++.+|++|.+.
T Consensus 4 l~~k~vlVtGas~~~giG~~~a~~l~~~G~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~i 83 (256)
T PRK12859 4 LKNKVAVVTGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEELLKNGVKVSSMELDLTQNDAP 83 (256)
T ss_pred cCCcEEEEECCCCCCChHHHHHHHHHHCCCeEEEEecccccccccccccHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHH
Confidence 4568999998 74 799999999999999999875421 111 11111 246678999999663
Q ss_pred -Hh-------hccCceeeEEEEecCCCCCCC----ChhhhHHHH----------HHHHhhcCCccEEEEEccceeecCCC
Q 017914 116 -MI-------LTTLKNYTHLLVSIPPLEGTG----DPMLKHGEL----------LRSTLMNGHLQWLGYLSSTGVYGHSG 173 (364)
Q Consensus 116 -~~-------~~~~d~v~~~~~~~~~~~~~~----~~~~~~~~~----------l~~a~~~~~~~r~v~~Ss~~vy~~~~ 173 (364)
.. +..+|.++|.++......... +.......| ++..++..+..++|++||.....
T Consensus 84 ~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~--- 160 (256)
T PRK12859 84 KELLNKVTEQLGYPHILVNNAAYSTNNDFSNLTAEELDKHYMVNVRATTLLSSQFARGFDKKSGGRIINMTSGQFQG--- 160 (256)
T ss_pred HHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCeEEEEEcccccCC---
Confidence 11 234799999987643321111 111111222 22333334456999999865331
Q ss_pred CccccCCCCCCCCChhHHHHHHHHHHHHHhhhh---cCCcEEEEEecceecCCCCh-HH-HHHHhcCcccccccccCCcc
Q 017914 174 GAWVDEDYPANPTTELGRLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRSS-VD-TIIKQLPLSEGQKMRRARQY 248 (364)
Q Consensus 174 ~~~~~E~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~-~~-~~~~~~~~~~~~~~~~~~~~ 248 (364)
+..+...|+.+|...+.+.+.++.+ .+++++.++||.+-.+.... .. .+....+ .
T Consensus 161 --------~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~PG~i~t~~~~~~~~~~~~~~~~------------~ 220 (256)
T PRK12859 161 --------PMVGELAYAATKGAIDALTSSLAAEVAHLGITVNAINPGPTDTGWMTEEIKQGLLPMFP------------F 220 (256)
T ss_pred --------CCCCchHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEEccccCCCCCHHHHHHHHhcCC------------C
Confidence 1223468999999999998888754 57999999999886543111 11 1111100 1
Q ss_pred cccccHHHHHHHHHHHccCCC---CCceEEEeCC
Q 017914 249 TSRIHVDDICQVLSASIDKPS---AWNVYNVVDD 279 (364)
Q Consensus 249 ~~~i~v~Dva~~~~~~l~~~~---~g~~~~i~~~ 279 (364)
..+...+|+|++++.++.... .|+.+.+.+|
T Consensus 221 ~~~~~~~d~a~~~~~l~s~~~~~~~G~~i~~dgg 254 (256)
T PRK12859 221 GRIGEPKDAARLIKFLASEEAEWITGQIIHSEGG 254 (256)
T ss_pred CCCcCHHHHHHHHHHHhCccccCccCcEEEeCCC
Confidence 123568999999999887642 3777776654
|
|
| >PRK06484 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.51 E-value=1e-12 Score=127.08 Aligned_cols=205 Identities=12% Similarity=0.010 Sum_probs=131.9
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhh---CCceEEEccCChhhH--Hhh-------ccCce
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQ---SGFDVHLFNANETAL--MIL-------TTLKN 123 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~---~~~~~~~~D~~~~~~--~~~-------~~~d~ 123 (364)
..++++|||| +|.||.+++++|.++|++|++++|+.++.+.+.+ ..+..+.+|++|++. ..+ ..+|.
T Consensus 267 ~~~k~~lItGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~ 346 (520)
T PRK06484 267 ESPRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEALGDEHLSVQADITDEAAVESAFAQIQARWGRLDV 346 (520)
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 4568999999 9999999999999999999999998766554432 345678899999763 222 35799
Q ss_pred eeEEEEecCCCCCCC-----ChhhhHHHHHHHH------hhc--CCccEEEEEccceeecCCCCccccCCCCCCCCChhH
Q 017914 124 YTHLLVSIPPLEGTG-----DPMLKHGELLRST------LMN--GHLQWLGYLSSTGVYGHSGGAWVDEDYPANPTTELG 190 (364)
Q Consensus 124 v~~~~~~~~~~~~~~-----~~~~~~~~~l~~a------~~~--~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~ 190 (364)
++|+++......... +.......|+... +.. .+..++|++||...+... .+...|+
T Consensus 347 li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~~~~Y~ 415 (520)
T PRK06484 347 LVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQGGVIVNLGSIASLLAL-----------PPRNAYC 415 (520)
T ss_pred EEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhccCCEEEEECchhhcCCC-----------CCCchhH
Confidence 999987543211111 1111122232222 111 223589999987543221 1346799
Q ss_pred HHHHHHHHHHHHhhhh---cCCcEEEEEecceecCCCChHH----HHHHhcCcccccccccCCcccccccHHHHHHHHHH
Q 017914 191 RLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRSSVD----TIIKQLPLSEGQKMRRARQYTSRIHVDDICQVLSA 263 (364)
Q Consensus 191 ~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~ 263 (364)
.+|...+.+++.++.+ .|++++.|.||.+..+...... ..... +..... ...+..++|+|++++.
T Consensus 416 asKaal~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~--~~~~~~------~~~~~~~~dia~~~~~ 487 (520)
T PRK06484 416 ASKAAVTMLSRSLACEWAPAGIRVNTVAPGYIETPAVLALKASGRADFDS--IRRRIP------LGRLGDPEEVAEAIAF 487 (520)
T ss_pred HHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCccCchhhhhccccHHHHHH--HHhcCC------CCCCcCHHHHHHHHHH
Confidence 9999999999988754 3799999999998765321100 00000 000000 1123678999999999
Q ss_pred HccCC---CCCceEEEeCCC
Q 017914 264 SIDKP---SAWNVYNVVDDD 280 (364)
Q Consensus 264 ~l~~~---~~g~~~~i~~~~ 280 (364)
++... -.|+.+.+.+|.
T Consensus 488 l~s~~~~~~~G~~i~vdgg~ 507 (520)
T PRK06484 488 LASPAASYVNGATLTVDGGW 507 (520)
T ss_pred HhCccccCccCcEEEECCCc
Confidence 98754 238888887663
|
|
| >PRK07832 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.50 E-value=1.3e-12 Score=115.53 Aligned_cols=194 Identities=13% Similarity=0.021 Sum_probs=116.2
Q ss_pred CeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhh----h---CCceEEEccCChhhH--Hh-------hccCc
Q 017914 60 NRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELE----Q---SGFDVHLFNANETAL--MI-------LTTLK 122 (364)
Q Consensus 60 ~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~----~---~~~~~~~~D~~~~~~--~~-------~~~~d 122 (364)
|+++||| +|+||.++++.|+++|++|++++|+.+..+... . ....++.+|++|.+. .. +..+|
T Consensus 1 k~vlItGas~giG~~la~~la~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 80 (272)
T PRK07832 1 KRCFVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADARALGGTVPEHRALDISDYDAVAAFAADIHAAHGSMD 80 (272)
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCCHHHHHHHHHHHHHhcCCCC
Confidence 4799999 999999999999999999999999876543321 1 123457899998663 11 23579
Q ss_pred eeeEEEEecCCCCCCCCh----hhhHHHH------HHHHh----hc-CCccEEEEEccceeecCCCCccccCCCCCCCCC
Q 017914 123 NYTHLLVSIPPLEGTGDP----MLKHGEL------LRSTL----MN-GHLQWLGYLSSTGVYGHSGGAWVDEDYPANPTT 187 (364)
Q Consensus 123 ~v~~~~~~~~~~~~~~~~----~~~~~~~------l~~a~----~~-~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~ 187 (364)
.++|+++........... ......| +..++ .. ....++|++||...+... ....
T Consensus 81 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~~~-----------~~~~ 149 (272)
T PRK07832 81 VVMNIAGISAWGTVDRLTHEQWRRMVDVNLMGPIHVIETFVPPMVAAGRGGHLVNVSSAAGLVAL-----------PWHA 149 (272)
T ss_pred EEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccccccCCC-----------CCCc
Confidence 999998754321111111 1111222 22222 12 224589999986432111 1235
Q ss_pred hhHHHHHHHHHHHHHhhh---hcCCcEEEEEecceecCCCChHHHHHHhcCcccc--cccccCCcccccccHHHHHHHHH
Q 017914 188 ELGRLRLSAEKGWLNLGR---DLGISAQVFRLGGIYGPGRSSVDTIIKQLPLSEG--QKMRRARQYTSRIHVDDICQVLS 262 (364)
Q Consensus 188 ~Y~~sK~~~E~~~~~~~~---~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~i~v~Dva~~~~ 262 (364)
.|+.+|...+.+.+.++. ..++++++++||.+.++...... ......... .... .......+..+|+|++++
T Consensus 150 ~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v~t~~~~~~~--~~~~~~~~~~~~~~~-~~~~~~~~~~~~vA~~~~ 226 (272)
T PRK07832 150 AYSASKFGLRGLSEVLRFDLARHGIGVSVVVPGAVKTPLVNTVE--IAGVDREDPRVQKWV-DRFRGHAVTPEKAAEKIL 226 (272)
T ss_pred chHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCcchhccc--ccccCcchhhHHHHH-HhcccCCCCHHHHHHHHH
Confidence 699999988887776653 45899999999999876421110 000000000 0000 000112378999999999
Q ss_pred HHccC
Q 017914 263 ASIDK 267 (364)
Q Consensus 263 ~~l~~ 267 (364)
.++.+
T Consensus 227 ~~~~~ 231 (272)
T PRK07832 227 AGVEK 231 (272)
T ss_pred HHHhc
Confidence 99964
|
|
| >PRK05872 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.50 E-value=3.1e-12 Score=114.52 Aligned_cols=191 Identities=9% Similarity=-0.001 Sum_probs=122.6
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhh-----CCceEEEccCChhhH--Hh-------hccC
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQ-----SGFDVHLFNANETAL--MI-------LTTL 121 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~-----~~~~~~~~D~~~~~~--~~-------~~~~ 121 (364)
..+++||||| +|.||.++++.|.++|++|++++|+.++...+.+ ..+..+.+|++|.+. .. +..+
T Consensus 7 l~gk~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 86 (296)
T PRK05872 7 LAGKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELGGDDRVLTVVADVTDLAAMQAAAEEAVERFGGI 86 (296)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCCcEEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence 4568999999 9999999999999999999999998776544321 234455699999653 21 2457
Q ss_pred ceeeEEEEecCCCCCCCCh----hhhHHHHH------HHHh----hcCCccEEEEEccceeecCCCCccccCCCCCCCCC
Q 017914 122 KNYTHLLVSIPPLEGTGDP----MLKHGELL------RSTL----MNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANPTT 187 (364)
Q Consensus 122 d~v~~~~~~~~~~~~~~~~----~~~~~~~l------~~a~----~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~ 187 (364)
|.++|+++........... ......|+ ..++ .+. ..++|++||...+.... ...
T Consensus 87 d~vI~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~-~g~iv~isS~~~~~~~~-----------~~~ 154 (296)
T PRK05872 87 DVVVANAGIASGGSVAQVDPDAFRRVIDVNLLGVFHTVRATLPALIER-RGYVLQVSSLAAFAAAP-----------GMA 154 (296)
T ss_pred CEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCEEEEEeCHhhcCCCC-----------Cch
Confidence 9999998864422111111 11111222 2222 122 35899999876543221 235
Q ss_pred hhHHHHHHHHHHHHHhhh---hcCCcEEEEEecceecCCCCh-------HHHHHHhcCcccccccccCCcccccccHHHH
Q 017914 188 ELGRLRLSAEKGWLNLGR---DLGISAQVFRLGGIYGPGRSS-------VDTIIKQLPLSEGQKMRRARQYTSRIHVDDI 257 (364)
Q Consensus 188 ~Y~~sK~~~E~~~~~~~~---~~~~~~~ilRp~~v~g~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dv 257 (364)
.|+.+|...+.+.+.++. ..|+.++++.||.+..+.... ...+....+ .....++..+|+
T Consensus 155 ~Y~asKaal~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~~~~~~~~~~~~~~~~----------~p~~~~~~~~~v 224 (296)
T PRK05872 155 AYCASKAGVEAFANALRLEVAHHGVTVGSAYLSWIDTDLVRDADADLPAFRELRARLP----------WPLRRTTSVEKC 224 (296)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCcEEEEEecCcccchhhhhccccchhHHHHHhhCC----------CcccCCCCHHHH
Confidence 799999999999988764 358999999999886543110 001110000 011234789999
Q ss_pred HHHHHHHccCCC
Q 017914 258 CQVLSASIDKPS 269 (364)
Q Consensus 258 a~~~~~~l~~~~ 269 (364)
|++++.++.+..
T Consensus 225 a~~i~~~~~~~~ 236 (296)
T PRK05872 225 AAAFVDGIERRA 236 (296)
T ss_pred HHHHHHHHhcCC
Confidence 999999998653
|
|
| >PRK08278 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.49 E-value=2.3e-12 Score=113.96 Aligned_cols=191 Identities=11% Similarity=0.064 Sum_probs=119.6
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhh-------h----hhh--CCceEEEccCChhhH--Hhh--
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKK-------E----LEQ--SGFDVHLFNANETAL--MIL-- 118 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-------~----l~~--~~~~~~~~D~~~~~~--~~~-- 118 (364)
..++++|||| +|+||+++++.|+++|++|++++|+.+... . +.. ..+.++.+|+++++. ..+
T Consensus 4 ~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~ 83 (273)
T PRK08278 4 LSGKTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQALPLVGDVRDEDQVAAAVAK 83 (273)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecccccccchhhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHH
Confidence 3457899999 999999999999999999999999754311 1 111 346788899999763 222
Q ss_pred -----ccCceeeEEEEecCCCCCCCChhh----hHHH------HHHHHh----hcCCccEEEEEccceeecCCCCccccC
Q 017914 119 -----TTLKNYTHLLVSIPPLEGTGDPML----KHGE------LLRSTL----MNGHLQWLGYLSSTGVYGHSGGAWVDE 179 (364)
Q Consensus 119 -----~~~d~v~~~~~~~~~~~~~~~~~~----~~~~------~l~~a~----~~~~~~r~v~~Ss~~vy~~~~~~~~~E 179 (364)
..+|.++|+++............. .... ++..++ ...+-.++|++||......
T Consensus 84 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~-------- 155 (273)
T PRK08278 84 AVERFGGIDICVNNASAINLTGTEDTPMKRFDLMQQINVRGTFLVSQACLPHLKKSENPHILTLSPPLNLDP-------- 155 (273)
T ss_pred HHHHhCCCCEEEECCCCcCCCCcccCCHHHHHHHHHHhchHHHHHHHHHHHHHHhcCCCEEEEECCchhccc--------
Confidence 368999999976433221111111 1112 223332 2333457888887531110
Q ss_pred CCCCCCCChhHHHHHHHHHHHHHhhhhc---CCcEEEEEecceecCCCChHHHHHHhcCcccccccccCCcccccccHHH
Q 017914 180 DYPANPTTELGRLRLSAEKGWLNLGRDL---GISAQVFRLGGIYGPGRSSVDTIIKQLPLSEGQKMRRARQYTSRIHVDD 256 (364)
Q Consensus 180 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D 256 (364)
....+...|+.+|.+.|.+++.++.+. +++++.+.||.++... ....+. ... .....+...+|
T Consensus 156 -~~~~~~~~Y~~sK~a~~~~~~~la~el~~~~I~v~~i~Pg~~i~t~--~~~~~~-----~~~------~~~~~~~~p~~ 221 (273)
T PRK08278 156 -KWFAPHTAYTMAKYGMSLCTLGLAEEFRDDGIAVNALWPRTTIATA--AVRNLL-----GGD------EAMRRSRTPEI 221 (273)
T ss_pred -cccCCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEeCCCccccH--HHHhcc-----ccc------ccccccCCHHH
Confidence 011245689999999999999887553 7999999998433211 111110 000 01123467899
Q ss_pred HHHHHHHHccCCC
Q 017914 257 ICQVLSASIDKPS 269 (364)
Q Consensus 257 va~~~~~~l~~~~ 269 (364)
+|++++.++....
T Consensus 222 va~~~~~l~~~~~ 234 (273)
T PRK08278 222 MADAAYEILSRPA 234 (273)
T ss_pred HHHHHHHHhcCcc
Confidence 9999999998653
|
|
| >TIGR02685 pter_reduc_Leis pteridine reductase | Back alignment and domain information |
|---|
Probab=99.49 E-value=3.6e-12 Score=112.39 Aligned_cols=201 Identities=10% Similarity=-0.004 Sum_probs=122.7
Q ss_pred CeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeC-chhhhh----hhh---CCceEEEccCChhhH------Hh-------
Q 017914 60 NRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTN-VMKKKE----LEQ---SGFDVHLFNANETAL------MI------- 117 (364)
Q Consensus 60 ~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~-~~~~~~----l~~---~~~~~~~~D~~~~~~------~~------- 117 (364)
+.++||| +|+||++++++|+++|++|+++.|+ .+.... +.. ..+.++.+|++|.+. ..
T Consensus 2 ~~~lITGas~gIG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~~~~ 81 (267)
T TIGR02685 2 PAAVVTGAAKRIGSSIAVALHQEGYRVVLHYHRSAAAASTLAAELNARRPNSAVTCQADLSNSATLFSRCEAIIDACFRA 81 (267)
T ss_pred CEEEEeCCCCcHHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHHHhccCCceEEEEccCCCchhhHHHHHHHHHHHHHc
Confidence 4789999 9999999999999999999998764 333322 211 235578899999641 11
Q ss_pred hccCceeeEEEEecCCCCCCCCh---------------hhhHHHHHHH------H----hhcC------CccEEEEEccc
Q 017914 118 LTTLKNYTHLLVSIPPLEGTGDP---------------MLKHGELLRS------T----LMNG------HLQWLGYLSST 166 (364)
Q Consensus 118 ~~~~d~v~~~~~~~~~~~~~~~~---------------~~~~~~~l~~------a----~~~~------~~~r~v~~Ss~ 166 (364)
+..+|+++|+++........... ......|+.. + ++.. ...++|++||.
T Consensus 82 ~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~~s~ 161 (267)
T TIGR02685 82 FGRCDVLVNNASAFYPTPLLRGDAGEGVGDKKSLEVQVAELFGSNAIAPYFLIKAFAQRQAGTRAEQRSTNLSIVNLCDA 161 (267)
T ss_pred cCCceEEEECCccCCCCcccccccccccccchhhHHHHHHHHHhhhHHHHHHHHHHHHHhhhcccccCCCCeEEEEehhh
Confidence 13589999998754332111100 0112222211 1 1111 12367777764
Q ss_pred eeecCCCCccccCCCCCCCCChhHHHHHHHHHHHHHhhhh---cCCcEEEEEecceecCCCCh---HHHHHHhcCccccc
Q 017914 167 GVYGHSGGAWVDEDYPANPTTELGRLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRSS---VDTIIKQLPLSEGQ 240 (364)
Q Consensus 167 ~vy~~~~~~~~~E~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~---~~~~~~~~~~~~~~ 240 (364)
... .+..+...|+.+|...|.+++.++.+ .|+++++|+||.+..+.... ...+.... ..
T Consensus 162 ~~~-----------~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~~~~~~~~~~~~~~~~~~~~--~~-- 226 (267)
T TIGR02685 162 MTD-----------QPLLGFTMYTMAKHALEGLTRSAALELAPLQIRVNGVAPGLSLLPDAMPFEVQEDYRRKV--PL-- 226 (267)
T ss_pred hcc-----------CCCcccchhHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCccCccccchhHHHHHHHhC--CC--
Confidence 321 12224468999999999999988655 58999999999886543211 11111111 10
Q ss_pred ccccCCcccccccHHHHHHHHHHHccCCC---CCceEEEeCCCCC
Q 017914 241 KMRRARQYTSRIHVDDICQVLSASIDKPS---AWNVYNVVDDDPA 282 (364)
Q Consensus 241 ~~~~~~~~~~~i~v~Dva~~~~~~l~~~~---~g~~~~i~~~~~~ 282 (364)
+ ..+...+|++++++.++.... .|+.+.+.++..+
T Consensus 227 --~-----~~~~~~~~va~~~~~l~~~~~~~~~G~~~~v~gg~~~ 264 (267)
T TIGR02685 227 --G-----QREASAEQIADVVIFLVSPKAKYITGTCIKVDGGLSL 264 (267)
T ss_pred --C-----cCCCCHHHHHHHHHHHhCcccCCcccceEEECCceec
Confidence 0 123578999999999987642 3778777766543
|
Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family. |
| >PRK05884 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.48 E-value=2.6e-12 Score=110.03 Aligned_cols=187 Identities=12% Similarity=0.063 Sum_probs=122.9
Q ss_pred CeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhh-hCCceEEEccCChhhH--Hhh----ccCceeeEEEEec
Q 017914 60 NRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELE-QSGFDVHLFNANETAL--MIL----TTLKNYTHLLVSI 131 (364)
Q Consensus 60 ~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~-~~~~~~~~~D~~~~~~--~~~----~~~d~v~~~~~~~ 131 (364)
|+++||| +|.||+++++.|.++|++|++++|+.++...+. ..++.++.+|++|.+. ..+ ..+|.++|+++..
T Consensus 1 m~vlItGas~giG~~ia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~id~lv~~ag~~ 80 (223)
T PRK05884 1 VEVLVTGGDTDLGRTIAEGFRNDGHKVTLVGARRDDLEVAAKELDVDAIVCDNTDPASLEEARGLFPHHLDTIVNVPAPS 80 (223)
T ss_pred CeEEEEeCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCcEEecCCCCHHHHHHHHHHHhhcCcEEEECCCcc
Confidence 4799998 899999999999999999999999877665443 2357788999999763 222 3589999987632
Q ss_pred CC---CC--CCCChh----hhHHHHHHHHhh------c--CCccEEEEEccceeecCCCCccccCCCCCCCCChhHHHHH
Q 017914 132 PP---LE--GTGDPM----LKHGELLRSTLM------N--GHLQWLGYLSSTGVYGHSGGAWVDEDYPANPTTELGRLRL 194 (364)
Q Consensus 132 ~~---~~--~~~~~~----~~~~~~l~~a~~------~--~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~~sK~ 194 (364)
.. .. ...+.. .....|+..... . ..-.++|++||... .....|+.+|.
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~Iv~isS~~~---------------~~~~~Y~asKa 145 (223)
T PRK05884 81 WDAGDPRTYSLADTANAWRNALDATVLSAVLTVQSVGDHLRSGGSIISVVPENP---------------PAGSAEAAIKA 145 (223)
T ss_pred ccCCCCcccchhcCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCeEEEEecCCC---------------CCccccHHHHH
Confidence 11 00 111111 111223322211 0 11258999988530 12357999999
Q ss_pred HHHHHHHHhhhh---cCCcEEEEEecceecCCCChHHHHHHhcCcccccccccCCcccccccHHHHHHHHHHHccCCC--
Q 017914 195 SAEKGWLNLGRD---LGISAQVFRLGGIYGPGRSSVDTIIKQLPLSEGQKMRRARQYTSRIHVDDICQVLSASIDKPS-- 269 (364)
Q Consensus 195 ~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~-- 269 (364)
..+.+.+.++.+ .|++++.|.||.+..+. . .. ... . +.-..+|+++++..++....
T Consensus 146 al~~~~~~la~e~~~~gI~v~~v~PG~v~t~~---~----~~--~~~-----~-----p~~~~~~ia~~~~~l~s~~~~~ 206 (223)
T PRK05884 146 ALSNWTAGQAAVFGTRGITINAVACGRSVQPG---Y----DG--LSR-----T-----PPPVAAEIARLALFLTTPAARH 206 (223)
T ss_pred HHHHHHHHHHHHhhhcCeEEEEEecCccCchh---h----hh--ccC-----C-----CCCCHHHHHHHHHHHcCchhhc
Confidence 999999888754 47999999999885431 0 10 000 0 01257999999999887542
Q ss_pred -CCceEEEeCCC
Q 017914 270 -AWNVYNVVDDD 280 (364)
Q Consensus 270 -~g~~~~i~~~~ 280 (364)
.|+++.+.+|.
T Consensus 207 v~G~~i~vdgg~ 218 (223)
T PRK05884 207 ITGQTLHVSHGA 218 (223)
T ss_pred cCCcEEEeCCCe
Confidence 37888776654
|
|
| >PRK07578 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.48 E-value=1e-12 Score=110.63 Aligned_cols=178 Identities=11% Similarity=0.002 Sum_probs=117.1
Q ss_pred CeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCChhhH--Hhh---ccCceeeEEEEecCC
Q 017914 60 NRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETAL--MIL---TTLKNYTHLLVSIPP 133 (364)
Q Consensus 60 ~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~--~~~---~~~d~v~~~~~~~~~ 133 (364)
|++|||| +|.||++++++|.++ ++|++++|+.. .+.+|++|.+. ..+ ..+|.++|+++....
T Consensus 1 ~~vlItGas~giG~~la~~l~~~-~~vi~~~r~~~-----------~~~~D~~~~~~~~~~~~~~~~id~lv~~ag~~~~ 68 (199)
T PRK07578 1 MKILVIGASGTIGRAVVAELSKR-HEVITAGRSSG-----------DVQVDITDPASIRALFEKVGKVDAVVSAAGKVHF 68 (199)
T ss_pred CeEEEEcCCcHHHHHHHHHHHhc-CcEEEEecCCC-----------ceEecCCChHHHHHHHHhcCCCCEEEECCCCCCC
Confidence 5899999 999999999999999 99999998743 35789998663 222 468999998875332
Q ss_pred CCCCC----ChhhhHHH------HHHHHhhc--CCccEEEEEccceeecCCCCccccCCCCCCCCChhHHHHHHHHHHHH
Q 017914 134 LEGTG----DPMLKHGE------LLRSTLMN--GHLQWLGYLSSTGVYGHSGGAWVDEDYPANPTTELGRLRLSAEKGWL 201 (364)
Q Consensus 134 ~~~~~----~~~~~~~~------~l~~a~~~--~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~~sK~~~E~~~~ 201 (364)
..... +....... ++..++.. .+..+++++||..... +......|+.+|...+.+.+
T Consensus 69 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~iss~~~~~-----------~~~~~~~Y~~sK~a~~~~~~ 137 (199)
T PRK07578 69 APLAEMTDEDFNVGLQSKLMGQVNLVLIGQHYLNDGGSFTLTSGILSDE-----------PIPGGASAATVNGALEGFVK 137 (199)
T ss_pred CchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEcccccCC-----------CCCCchHHHHHHHHHHHHHH
Confidence 11111 11111112 23333221 1224799998754221 11134579999999999998
Q ss_pred Hhhhh--cCCcEEEEEecceecCCCChHHHHHHhcCcccccccccCCcccccccHHHHHHHHHHHccCCCCCceEEE
Q 017914 202 NLGRD--LGISAQVFRLGGIYGPGRSSVDTIIKQLPLSEGQKMRRARQYTSRIHVDDICQVLSASIDKPSAWNVYNV 276 (364)
Q Consensus 202 ~~~~~--~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~~g~~~~i 276 (364)
.++.+ .|++++.+.||.+-.+.. .... ... ...++..+|+|++++.++++...|++|++
T Consensus 138 ~la~e~~~gi~v~~i~Pg~v~t~~~----~~~~--~~~----------~~~~~~~~~~a~~~~~~~~~~~~g~~~~~ 198 (199)
T PRK07578 138 AAALELPRGIRINVVSPTVLTESLE----KYGP--FFP----------GFEPVPAARVALAYVRSVEGAQTGEVYKV 198 (199)
T ss_pred HHHHHccCCeEEEEEcCCcccCchh----hhhh--cCC----------CCCCCCHHHHHHHHHHHhccceeeEEecc
Confidence 87664 589999999998743311 0000 000 12247899999999999988777888775
|
|
| >PRK06079 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.48 E-value=3.3e-12 Score=111.55 Aligned_cols=202 Identities=15% Similarity=0.088 Sum_probs=125.2
Q ss_pred CCCCeEEEEc-C--ChhhHHHHHHHHhCCCEEEEEEeCchhhhhh---hhCCceEEEccCChhhH--H-------hhccC
Q 017914 57 QSPNRMLILG-M--GFVGRIFAEKIKNQGWVVSGTCTNVMKKKEL---EQSGFDVHLFNANETAL--M-------ILTTL 121 (364)
Q Consensus 57 ~~~~~vlVtG-t--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l---~~~~~~~~~~D~~~~~~--~-------~~~~~ 121 (364)
..++++|||| + +.||+.++++|+++|++|++..|+......+ ....+.++.+|++|++. . .+..+
T Consensus 5 l~~k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i 84 (252)
T PRK06079 5 LSGKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQNDRMKKSLQKLVDEEDLLVECDVASDESIERAFATIKERVGKI 84 (252)
T ss_pred cCCCEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCchHHHHHHHhhccCceeEEeCCCCCHHHHHHHHHHHHHHhCCC
Confidence 3468999998 7 6899999999999999999999874322222 22356789999999663 1 12457
Q ss_pred ceeeEEEEecCCC---CCCCC-hhh----hHHHHH----------HHHhhcCCccEEEEEccceeecCCCCccccCCCCC
Q 017914 122 KNYTHLLVSIPPL---EGTGD-PML----KHGELL----------RSTLMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPA 183 (364)
Q Consensus 122 d~v~~~~~~~~~~---~~~~~-~~~----~~~~~l----------~~a~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~ 183 (364)
|.++|+++..... ....+ ... ....|+ +..+++ -.++|++||...... .
T Consensus 85 D~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~l~~~~~~~~~~--~g~Iv~iss~~~~~~-----------~ 151 (252)
T PRK06079 85 DGIVHAIAYAKKEELGGNVTDTSRDGYALAQDISAYSLIAVAKYARPLLNP--GASIVTLTYFGSERA-----------I 151 (252)
T ss_pred CEEEEcccccccccccCCcccCCHHHHHHHhCcccHHHHHHHHHHHHhccc--CceEEEEeccCcccc-----------C
Confidence 9999988754321 11111 111 111122 222222 258999988543211 1
Q ss_pred CCCChhHHHHHHHHHHHHHhhhh---cCCcEEEEEecceecCCCC-h--HHHHHHhcCcccccccccCCcccccccHHHH
Q 017914 184 NPTTELGRLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRS-S--VDTIIKQLPLSEGQKMRRARQYTSRIHVDDI 257 (364)
Q Consensus 184 ~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dv 257 (364)
.....|+.+|...+.+.+.++.+ .|++++.|.||.+-.+... . ....... .....+ ..-+...+|+
T Consensus 152 ~~~~~Y~asKaal~~l~~~la~el~~~gI~vn~i~PG~v~T~~~~~~~~~~~~~~~--~~~~~p------~~r~~~pedv 223 (252)
T PRK06079 152 PNYNVMGIAKAALESSVRYLARDLGKKGIRVNAISAGAVKTLAVTGIKGHKDLLKE--SDSRTV------DGVGVTIEEV 223 (252)
T ss_pred CcchhhHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccccccccCCChHHHHHH--HHhcCc------ccCCCCHHHH
Confidence 12357999999999999988754 4899999999998654211 1 0111111 000000 1124678999
Q ss_pred HHHHHHHccCCC---CCceEEEeCC
Q 017914 258 CQVLSASIDKPS---AWNVYNVVDD 279 (364)
Q Consensus 258 a~~~~~~l~~~~---~g~~~~i~~~ 279 (364)
|++++.++.... .|+++.+.++
T Consensus 224 a~~~~~l~s~~~~~itG~~i~vdgg 248 (252)
T PRK06079 224 GNTAAFLLSDLSTGVTGDIIYVDKG 248 (252)
T ss_pred HHHHHHHhCcccccccccEEEeCCc
Confidence 999999987642 3777777665
|
|
| >TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative | Back alignment and domain information |
|---|
Probab=99.46 E-value=7.8e-12 Score=108.34 Aligned_cols=198 Identities=11% Similarity=0.049 Sum_probs=122.0
Q ss_pred EEEEc-CChhhHHHHHHHHhCCCEEEEEEeCch-hhhh----hhh--CCceEEEccCChhhH--Hhh-------ccCcee
Q 017914 62 MLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVM-KKKE----LEQ--SGFDVHLFNANETAL--MIL-------TTLKNY 124 (364)
Q Consensus 62 vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~-~~~~----l~~--~~~~~~~~D~~~~~~--~~~-------~~~d~v 124 (364)
||||| +|+||.+++++|.++|++|++++|+.. +... +.. .++.++.+|++|.+. ..+ ..+|.+
T Consensus 1 vlItGas~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i~~l 80 (239)
T TIGR01831 1 VLVTGASRGIGRAIANRLAADGFEICVHYHSGRSDAESVVSAIQAQGGNARLLQFDVADRVACRTLLEADIAEHGAYYGV 80 (239)
T ss_pred CEEeCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 68999 999999999999999999999987532 2222 211 357889999999763 222 346888
Q ss_pred eEEEEecCCCCC----CCChhhhHHH------HHHHHh-----hcCCccEEEEEccce-eecCCCCccccCCCCCCCCCh
Q 017914 125 THLLVSIPPLEG----TGDPMLKHGE------LLRSTL-----MNGHLQWLGYLSSTG-VYGHSGGAWVDEDYPANPTTE 188 (364)
Q Consensus 125 ~~~~~~~~~~~~----~~~~~~~~~~------~l~~a~-----~~~~~~r~v~~Ss~~-vy~~~~~~~~~E~~~~~~~~~ 188 (364)
+|+++....... ..+....... ++..++ +..+.+++|++||.. +++.. ....
T Consensus 81 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~------------~~~~ 148 (239)
T TIGR01831 81 VLNAGITRDAAFPALSEEDWDIVIHTNLDGFYNVIHPCTMPMIRARQGGRIITLASVSGVMGNR------------GQVN 148 (239)
T ss_pred EECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcCCeEEEEEcchhhccCCC------------CCcc
Confidence 888765432211 1111111112 233322 223456899998864 33321 2357
Q ss_pred hHHHHHHHHHHHHHhhhh---cCCcEEEEEecceecCCCChHHHHHHhcCcccccccccCCcccccccHHHHHHHHHHHc
Q 017914 189 LGRLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRSSVDTIIKQLPLSEGQKMRRARQYTSRIHVDDICQVLSASI 265 (364)
Q Consensus 189 Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l 265 (364)
|+.+|...+.+.+.++.+ .|++++.++||.+.++............ ... .+ ..-+...+|+|++++.++
T Consensus 149 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~-~~~-~~------~~~~~~~~~va~~~~~l~ 220 (239)
T TIGR01831 149 YSAAKAGLIGATKALAVELAKRKITVNCIAPGLIDTEMLAEVEHDLDEA-LKT-VP------MNRMGQPAEVASLAGFLM 220 (239)
T ss_pred hHHHHHHHHHHHHHHHHHHhHhCeEEEEEEEccCccccchhhhHHHHHH-Hhc-CC------CCCCCCHHHHHHHHHHHc
Confidence 999999998888877644 4899999999998766432111111100 000 00 112356899999999999
Q ss_pred cCCC---CCceEEEeCC
Q 017914 266 DKPS---AWNVYNVVDD 279 (364)
Q Consensus 266 ~~~~---~g~~~~i~~~ 279 (364)
.... .|+...+.++
T Consensus 221 ~~~~~~~~g~~~~~~gg 237 (239)
T TIGR01831 221 SDGASYVTRQVISVNGG 237 (239)
T ss_pred CchhcCccCCEEEecCC
Confidence 8653 2666666554
|
This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found. |
| >PRK07791 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.46 E-value=7.4e-12 Score=111.42 Aligned_cols=204 Identities=8% Similarity=-0.051 Sum_probs=124.0
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCc---------hhhhh----hhh--CCceEEEccCChhhH--H--
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNV---------MKKKE----LEQ--SGFDVHLFNANETAL--M-- 116 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~---------~~~~~----l~~--~~~~~~~~D~~~~~~--~-- 116 (364)
..++++|||| ++.||+++++.|+++|++|++++|+. +.... +.. ..+.++.+|++|.+. .
T Consensus 4 l~~k~~lITGas~GIG~aia~~la~~G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~ 83 (286)
T PRK07791 4 LDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGEAVANGDDIADWDGAANLV 83 (286)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeeCCccccccccchhHHHHHHHHHHhcCCceEEEeCCCCCHHHHHHHH
Confidence 4468999998 99999999999999999999988764 22222 211 245678899999653 1
Q ss_pred -----hhccCceeeEEEEecCCCC--CC--CChhhhHHHHHH----------HHhhcC---C---ccEEEEEccceeecC
Q 017914 117 -----ILTTLKNYTHLLVSIPPLE--GT--GDPMLKHGELLR----------STLMNG---H---LQWLGYLSSTGVYGH 171 (364)
Q Consensus 117 -----~~~~~d~v~~~~~~~~~~~--~~--~~~~~~~~~~l~----------~a~~~~---~---~~r~v~~Ss~~vy~~ 171 (364)
.+..+|+++|+++...... .. .+.......|+. ..+... + ..++|++||...+..
T Consensus 84 ~~~~~~~g~id~lv~nAG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~ 163 (286)
T PRK07791 84 DAAVETFGGLDVLVNNAGILRDRMIANMSEEEWDAVIAVHLKGHFATLRHAAAYWRAESKAGRAVDARIINTSSGAGLQG 163 (286)
T ss_pred HHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccCCCCCcEEEEeCchhhCcC
Confidence 1245799999887543211 01 011111122222 112211 1 248999988653211
Q ss_pred CCCccccCCCCCCCCChhHHHHHHHHHHHHHhhhh---cCCcEEEEEecceecCC-CChHHHHHHhcCcccccccccCCc
Q 017914 172 SGGAWVDEDYPANPTTELGRLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPG-RSSVDTIIKQLPLSEGQKMRRARQ 247 (364)
Q Consensus 172 ~~~~~~~E~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~-~~~~~~~~~~~~~~~~~~~~~~~~ 247 (364)
. .....|+.+|.+.+.+.+.++.+ .|++++.|.|| +..+. ......+.... ...
T Consensus 164 ~-----------~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~Pg-~~T~~~~~~~~~~~~~~----------~~~ 221 (286)
T PRK07791 164 S-----------VGQGNYSAAKAGIAALTLVAAAELGRYGVTVNAIAPA-ARTRMTETVFAEMMAKP----------EEG 221 (286)
T ss_pred C-----------CCchhhHHHHHHHHHHHHHHHHHHHHhCeEEEEECCC-CCCCcchhhHHHHHhcC----------ccc
Confidence 1 12357999999999999887654 58999999998 42221 11111111100 001
Q ss_pred ccccccHHHHHHHHHHHccCC---CCCceEEEeCCCCC
Q 017914 248 YTSRIHVDDICQVLSASIDKP---SAWNVYNVVDDDPA 282 (364)
Q Consensus 248 ~~~~i~v~Dva~~~~~~l~~~---~~g~~~~i~~~~~~ 282 (364)
...+...+|+|++++.++... -.|+.+.+.+|...
T Consensus 222 ~~~~~~pedva~~~~~L~s~~~~~itG~~i~vdgG~~~ 259 (286)
T PRK07791 222 EFDAMAPENVSPLVVWLGSAESRDVTGKVFEVEGGKIS 259 (286)
T ss_pred ccCCCCHHHHHHHHHHHhCchhcCCCCcEEEEcCCceE
Confidence 112467999999999998754 23788887766543
|
|
| >PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.46 E-value=5.6e-12 Score=113.31 Aligned_cols=218 Identities=11% Similarity=-0.034 Sum_probs=131.3
Q ss_pred CCCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCch-hhhh----hhh--CCceEEEccCChhhH--Hh------hc
Q 017914 56 WQSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVM-KKKE----LEQ--SGFDVHLFNANETAL--MI------LT 119 (364)
Q Consensus 56 ~~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~-~~~~----l~~--~~~~~~~~D~~~~~~--~~------~~ 119 (364)
...++++|||| +|+||++++++|+++|++|++.+++.. .... +.. ..+.++.+|++|.+. .. +.
T Consensus 9 ~l~~k~~lVTGas~gIG~~ia~~L~~~Ga~Vv~~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~d~~~~~~~~~~~~~~g 88 (306)
T PRK07792 9 DLSGKVAVVTGAAAGLGRAEALGLARLGATVVVNDVASALDASDVLDEIRAAGAKAVAVAGDISQRATADELVATAVGLG 88 (306)
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCchhHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHhC
Confidence 35568999999 899999999999999999999987532 2222 221 246788999999653 22 23
Q ss_pred cCceeeEEEEecCCCCCCC----ChhhhHHHH------HHHHhh----cC-------CccEEEEEccceeecCCCCcccc
Q 017914 120 TLKNYTHLLVSIPPLEGTG----DPMLKHGEL------LRSTLM----NG-------HLQWLGYLSSTGVYGHSGGAWVD 178 (364)
Q Consensus 120 ~~d~v~~~~~~~~~~~~~~----~~~~~~~~~------l~~a~~----~~-------~~~r~v~~Ss~~vy~~~~~~~~~ 178 (364)
.+|+++|+++......... +.......| +..++. .. ...++|++||...+....
T Consensus 89 ~iD~li~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~----- 163 (306)
T PRK07792 89 GLDIVVNNAGITRDRMLFNMSDEEWDAVIAVHLRGHFLLTRNAAAYWRAKAKAAGGPVYGRIVNTSSEAGLVGPV----- 163 (306)
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcccCCCCCcEEEEECCcccccCCC-----
Confidence 5799999987654321111 111111222 222221 11 124899998865432211
Q ss_pred CCCCCCCCChhHHHHHHHHHHHHHhhhh---cCCcEEEEEecceecCCCChHHHHHHhcCcccccccccCCcccccccHH
Q 017914 179 EDYPANPTTELGRLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRSSVDTIIKQLPLSEGQKMRRARQYTSRIHVD 255 (364)
Q Consensus 179 E~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~ 255 (364)
....|+.+|...+.+++.++.+ +|++++++.|+. . ......+... ... .. ......+..+
T Consensus 164 ------~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~i~Pg~--~--t~~~~~~~~~--~~~--~~---~~~~~~~~pe 226 (306)
T PRK07792 164 ------GQANYGAAKAGITALTLSAARALGRYGVRANAICPRA--R--TAMTADVFGD--APD--VE---AGGIDPLSPE 226 (306)
T ss_pred ------CCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEECCCC--C--Cchhhhhccc--cch--hh---hhccCCCCHH
Confidence 2347999999999999887653 589999999973 1 1111111000 000 00 0112346799
Q ss_pred HHHHHHHHHccCC---CCCceEEEeCC------------------CCCCHHHHHHHHHHHh
Q 017914 256 DICQVLSASIDKP---SAWNVYNVVDD------------------DPAPREEVFAYAWDLV 295 (364)
Q Consensus 256 Dva~~~~~~l~~~---~~g~~~~i~~~------------------~~~s~~el~~~i~~~~ 295 (364)
|+|.++..++... ..|++|.+.++ ..++..|+.+.+.+.+
T Consensus 227 ~va~~v~~L~s~~~~~~tG~~~~v~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (306)
T PRK07792 227 HVVPLVQFLASPAAAEVNGQVFIVYGPMVTLVAAPVVERRFDADGDAWDPGELSATLRDYF 287 (306)
T ss_pred HHHHHHHHHcCccccCCCCCEEEEcCCeEEEEeeeeecceecCCCCCCCHHHHHHHHHHHh
Confidence 9999998888653 23666666442 3466666666666663
|
|
| >PRK07201 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.46 E-value=2.1e-12 Score=128.46 Aligned_cols=185 Identities=13% Similarity=0.020 Sum_probs=126.4
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhh------hCCceEEEccCChhhH--Hhh-------cc
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELE------QSGFDVHLFNANETAL--MIL-------TT 120 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~------~~~~~~~~~D~~~~~~--~~~-------~~ 120 (364)
..++++|||| +|+||++++++|+++|++|++++|+++....+. ...+.++.+|++|.+. ..+ ..
T Consensus 369 ~~~k~vlItGas~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~ 448 (657)
T PRK07201 369 LVGKVVLITGASSGIGRATAIKVAEAGATVFLVARNGEALDELVAEIRAKGGTAHAYTCDLTDSAAVDHTVKDILAEHGH 448 (657)
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhcCC
Confidence 4468999999 999999999999999999999999877654432 1357788999999763 222 25
Q ss_pred CceeeEEEEecCCCC---CC---CChhhhHHHHHH----------HHhhcCCccEEEEEccceeecCCCCccccCCCCCC
Q 017914 121 LKNYTHLLVSIPPLE---GT---GDPMLKHGELLR----------STLMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPAN 184 (364)
Q Consensus 121 ~d~v~~~~~~~~~~~---~~---~~~~~~~~~~l~----------~a~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~ 184 (364)
+|.++|+++...... .. .+.......|+. ..+++.+.+++|++||.+.+....
T Consensus 449 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~----------- 517 (657)
T PRK07201 449 VDYLVNNAGRSIRRSVENSTDRFHDYERTMAVNYFGAVRLILGLLPHMRERRFGHVVNVSSIGVQTNAP----------- 517 (657)
T ss_pred CCEEEECCCCCCCCChhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEECChhhcCCCC-----------
Confidence 899999987532211 11 111112223322 223345667999999987764322
Q ss_pred CCChhHHHHHHHHHHHHHhhhh---cCCcEEEEEecceecCCCChHHHHHHhcCcccccccccCCcccccccHHHHHHHH
Q 017914 185 PTTELGRLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRSSVDTIIKQLPLSEGQKMRRARQYTSRIHVDDICQVL 261 (364)
Q Consensus 185 ~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~ 261 (364)
....|+.+|...+.+++.++.+ .|+++++++||.+..+..... ... .....+..+++|+.+
T Consensus 518 ~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v~T~~~~~~------~~~----------~~~~~~~~~~~a~~i 581 (657)
T PRK07201 518 RFSAYVASKAALDAFSDVAASETLSDGITFTTIHMPLVRTPMIAPT------KRY----------NNVPTISPEEAADMV 581 (657)
T ss_pred CcchHHHHHHHHHHHHHHHHHHHHhhCCcEEEEECCcCcccccCcc------ccc----------cCCCCCCHHHHHHHH
Confidence 2357999999999999887644 489999999999876532110 000 011237799999999
Q ss_pred HHHccCC
Q 017914 262 SASIDKP 268 (364)
Q Consensus 262 ~~~l~~~ 268 (364)
+..+.+.
T Consensus 582 ~~~~~~~ 588 (657)
T PRK07201 582 VRAIVEK 588 (657)
T ss_pred HHHHHhC
Confidence 9987654
|
|
| >PRK05855 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.45 E-value=4.9e-12 Score=124.07 Aligned_cols=200 Identities=8% Similarity=-0.037 Sum_probs=124.4
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhh------CCceEEEccCChhhH--Hhh-------cc
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQ------SGFDVHLFNANETAL--MIL-------TT 120 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~------~~~~~~~~D~~~~~~--~~~-------~~ 120 (364)
...+++|||| +|+||++++++|.++|++|++++|+.++.+.+.. .++.++.+|++|++. ..+ ..
T Consensus 313 ~~~~~~lv~G~s~giG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~ 392 (582)
T PRK05855 313 FSGKLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELIRAAGAVAHAYRVDVSDADAMEAFAEWVRAEHGV 392 (582)
T ss_pred CCCCEEEEECCcCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHhcCC
Confidence 3457899999 9999999999999999999999998766544321 346788999999764 222 24
Q ss_pred CceeeEEEEecCCCCCCCCh----hhhHHHHHHHH----------hhcCC-ccEEEEEccceeecCCCCccccCCCCCCC
Q 017914 121 LKNYTHLLVSIPPLEGTGDP----MLKHGELLRST----------LMNGH-LQWLGYLSSTGVYGHSGGAWVDEDYPANP 185 (364)
Q Consensus 121 ~d~v~~~~~~~~~~~~~~~~----~~~~~~~l~~a----------~~~~~-~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~ 185 (364)
+|.++|+++........... ......|+... +.+.+ ..++|++||...|.... .
T Consensus 393 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~-----------~ 461 (582)
T PRK05855 393 PDIVVNNAGIGMAGGFLDTSAEDWDRVLDVNLWGVIHGCRLFGRQMVERGTGGHIVNVASAAAYAPSR-----------S 461 (582)
T ss_pred CcEEEECCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhccCCC-----------C
Confidence 79999999765432211111 11112232222 22222 35899999987764322 3
Q ss_pred CChhHHHHHHHHHHHHHhhhh---cCCcEEEEEecceecCCCChHHHHHHhcCccc----ccccccCCcccccccHHHHH
Q 017914 186 TTELGRLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRSSVDTIIKQLPLSE----GQKMRRARQYTSRIHVDDIC 258 (364)
Q Consensus 186 ~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~i~v~Dva 258 (364)
...|+.+|.+.+.+.+.++.+ .|+++++++||.+-.+...... + ....... ...... ....-.+..+|+|
T Consensus 462 ~~~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~-~-~~~~~~~~~~~~~~~~~-~~~~~~~~p~~va 538 (582)
T PRK05855 462 LPAYATSKAAVLMLSECLRAELAAAGIGVTAICPGFVDTNIVATTR-F-AGADAEDEARRRGRADK-LYQRRGYGPEKVA 538 (582)
T ss_pred CcHHHHHHHHHHHHHHHHHHHhcccCcEEEEEEeCCCcccchhccc-c-CCcccchhhhHHhhhhh-hccccCCCHHHHH
Confidence 468999999999988877643 4899999999988553211000 0 0000000 000000 0000124689999
Q ss_pred HHHHHHccCCCC
Q 017914 259 QVLSASIDKPSA 270 (364)
Q Consensus 259 ~~~~~~l~~~~~ 270 (364)
++++.++.++..
T Consensus 539 ~~~~~~~~~~~~ 550 (582)
T PRK05855 539 KAIVDAVKRNKA 550 (582)
T ss_pred HHHHHHHHcCCC
Confidence 999999987643
|
|
| >KOG4288 consensus Predicted oxidoreductase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.44 E-value=5.2e-13 Score=108.60 Aligned_cols=202 Identities=15% Similarity=0.100 Sum_probs=134.0
Q ss_pred CeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhh-hhhCCceEEEccCChhh-H-HhhccCceeeEEEEecCCCC
Q 017914 60 NRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKE-LEQSGFDVHLFNANETA-L-MILTTLKNYTHLLVSIPPLE 135 (364)
Q Consensus 60 ~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-l~~~~~~~~~~D~~~~~-~-~~~~~~d~v~~~~~~~~~~~ 135 (364)
-..++.| .||.|+++++.....++.|..+.|+..+... -....+.++.+|....+ + ..+.+...++-+++..+...
T Consensus 53 e~tlvlggnpfsgs~vlk~A~~vv~svgilsen~~k~~l~sw~~~vswh~gnsfssn~~k~~l~g~t~v~e~~ggfgn~~ 132 (283)
T KOG4288|consen 53 EWTLVLGGNPFSGSEVLKNATNVVHSVGILSENENKQTLSSWPTYVSWHRGNSFSSNPNKLKLSGPTFVYEMMGGFGNII 132 (283)
T ss_pred HHHhhhcCCCcchHHHHHHHHhhceeeeEeecccCcchhhCCCcccchhhccccccCcchhhhcCCcccHHHhcCccchH
Confidence 4678887 9999999999999999999999998543211 11245677888887665 3 55667777777665544322
Q ss_pred CCCChhhhHHHHHHHHhhcCCccEEEEEccceeecCCCCccccCCCCCCCCChhHHHHHHHHHHHHHhhhhcCCcEEEEE
Q 017914 136 GTGDPMLKHGELLRSTLMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANPTTELGRLRLSAEKGWLNLGRDLGISAQVFR 215 (364)
Q Consensus 136 ~~~~~~~~~~~~l~~a~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR 215 (364)
.+.........+-..++.+.|+++|+|+|... ||-. +..| ..|-.+|.++|..+.. .++.+-+++|
T Consensus 133 ~m~~ing~ani~a~kaa~~~gv~~fvyISa~d-~~~~---------~~i~-rGY~~gKR~AE~Ell~---~~~~rgiilR 198 (283)
T KOG4288|consen 133 LMDRINGTANINAVKAAAKAGVPRFVYISAHD-FGLP---------PLIP-RGYIEGKREAEAELLK---KFRFRGIILR 198 (283)
T ss_pred HHHHhccHhhHHHHHHHHHcCCceEEEEEhhh-cCCC---------Cccc-hhhhccchHHHHHHHH---hcCCCceeec
Confidence 22222334445667777889999999999632 2211 1223 3799999999998775 5568899999
Q ss_pred ecceecCCC------------ChHHHHHHhcCcccccccccCCcccccccHHHHHHHHHHHccCCCCCceEE
Q 017914 216 LGGIYGPGR------------SSVDTIIKQLPLSEGQKMRRARQYTSRIHVDDICQVLSASIDKPSAWNVYN 275 (364)
Q Consensus 216 p~~v~g~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~~g~~~~ 275 (364)
||++||... .++........-+.....-.+....+.+.+++||.+.+.+++++.-.+++.
T Consensus 199 PGFiyg~R~v~g~~~pL~~vg~pl~~~~~~a~k~~~kLp~lg~l~~ppvnve~VA~aal~ai~dp~f~Gvv~ 270 (283)
T KOG4288|consen 199 PGFIYGTRNVGGIKSPLHTVGEPLEMVLKFALKPLNKLPLLGPLLAPPVNVESVALAALKAIEDPDFKGVVT 270 (283)
T ss_pred cceeecccccCcccccHHhhhhhHHHHHHhhhchhhcCcccccccCCCcCHHHHHHHHHHhccCCCcCceee
Confidence 999999742 112333332210111111123445677999999999999999986533443
|
|
| >PRK06940 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.44 E-value=1.6e-11 Score=108.63 Aligned_cols=210 Identities=10% Similarity=0.015 Sum_probs=124.3
Q ss_pred CCCeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCchhhhhh----hh--CCceEEEccCChhhH--Hhh------ccCce
Q 017914 58 SPNRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMKKKEL----EQ--SGFDVHLFNANETAL--MIL------TTLKN 123 (364)
Q Consensus 58 ~~~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l----~~--~~~~~~~~D~~~~~~--~~~------~~~d~ 123 (364)
|++.++|||+|+||++++++|. +|++|++++|+.++.+.+ .. ..+.++.+|++|.+. ..+ ..+|.
T Consensus 1 ~~k~~lItGa~gIG~~la~~l~-~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~i~~~~~~~~~~g~id~ 79 (275)
T PRK06940 1 MKEVVVVIGAGGIGQAIARRVG-AGKKVLLADYNEENLEAAAKTLREAGFDVSTQEVDVSSRESVKALAATAQTLGPVTG 79 (275)
T ss_pred CCCEEEEECCChHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHhcCCCCE
Confidence 3578899997799999999996 899999999987654332 21 246788999999763 222 35789
Q ss_pred eeEEEEecCCCCCCCChhhhHHHHHHHH------hh---cCCccEEEEEccceeecCCC-C----c---cccCCC----C
Q 017914 124 YTHLLVSIPPLEGTGDPMLKHGELLRST------LM---NGHLQWLGYLSSTGVYGHSG-G----A---WVDEDY----P 182 (364)
Q Consensus 124 v~~~~~~~~~~~~~~~~~~~~~~~l~~a------~~---~~~~~r~v~~Ss~~vy~~~~-~----~---~~~E~~----~ 182 (364)
++|+++.... ..+.......|+... +. ..+ .++|++||........ . . .++... +
T Consensus 80 li~nAG~~~~---~~~~~~~~~vN~~g~~~l~~~~~~~m~~~-g~iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (275)
T PRK06940 80 LVHTAGVSPS---QASPEAILKVDLYGTALVLEEFGKVIAPG-GAGVVIASQSGHRLPALTAEQERALATTPTEELLSLP 155 (275)
T ss_pred EEECCCcCCc---hhhHHHHHHHhhHHHHHHHHHHHHHHhhC-CCEEEEEecccccCcccchhhhccccccccccccccc
Confidence 9998875322 122222333333222 21 112 3467776654321110 0 0 000000 0
Q ss_pred -------CCCCChhHHHHHHHHHHHHHhhhh---cCCcEEEEEecceecCCCC-hHH----HHHHhcCcccccccccCCc
Q 017914 183 -------ANPTTELGRLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRS-SVD----TIIKQLPLSEGQKMRRARQ 247 (364)
Q Consensus 183 -------~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~-~~~----~~~~~~~~~~~~~~~~~~~ 247 (364)
..+...|+.+|.+.+.+.+.++.+ .|++++.|.||.+..+... .+. ..... +....+
T Consensus 156 ~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gIrvn~i~PG~v~T~~~~~~~~~~~~~~~~~--~~~~~p------ 227 (275)
T PRK06940 156 FLQPDAIEDSLHAYQIAKRANALRVMAEAVKWGERGARINSISPGIISTPLAQDELNGPRGDGYRN--MFAKSP------ 227 (275)
T ss_pred cccccccCCccchhHHHHHHHHHHHHHHHHHHccCCeEEEEeccCcCcCccchhhhcCCchHHHHH--HhhhCC------
Confidence 013467999999999998877643 4799999999988765311 110 00000 000000
Q ss_pred ccccccHHHHHHHHHHHccCCC---CCceEEEeCCC
Q 017914 248 YTSRIHVDDICQVLSASIDKPS---AWNVYNVVDDD 280 (364)
Q Consensus 248 ~~~~i~v~Dva~~~~~~l~~~~---~g~~~~i~~~~ 280 (364)
..-+...+|+|++++.++.... .|+++.+.+|.
T Consensus 228 ~~r~~~peeia~~~~fL~s~~~~~itG~~i~vdgg~ 263 (275)
T PRK06940 228 AGRPGTPDEIAALAEFLMGPRGSFITGSDFLVDGGA 263 (275)
T ss_pred cccCCCHHHHHHHHHHHcCcccCcccCceEEEcCCe
Confidence 1124778999999999886532 37788776653
|
|
| >PRK06505 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.43 E-value=1.3e-11 Score=108.85 Aligned_cols=202 Identities=14% Similarity=0.038 Sum_probs=123.0
Q ss_pred CCCeEEEEc-CC--hhhHHHHHHHHhCCCEEEEEEeCchhh---hhhhh--CCceEEEccCChhhH--H-------hhcc
Q 017914 58 SPNRMLILG-MG--FVGRIFAEKIKNQGWVVSGTCTNVMKK---KELEQ--SGFDVHLFNANETAL--M-------ILTT 120 (364)
Q Consensus 58 ~~~~vlVtG-tG--~iG~~l~~~L~~~g~~V~~~~r~~~~~---~~l~~--~~~~~~~~D~~~~~~--~-------~~~~ 120 (364)
.++.+|||| ++ .||+.++++|+++|++|++..|+.... ..+.. .....+.+|++|.+. . .+..
T Consensus 6 ~~k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~g~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 85 (271)
T PRK06505 6 QGKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGEALGKRVKPLAESLGSDFVLPCDVEDIASVDAVFEALEKKWGK 85 (271)
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecCchHHHHHHHHHHHhcCCceEEeCCCCCHHHHHHHHHHHHHHhCC
Confidence 457899999 65 899999999999999999998865322 22211 123468899999763 1 1245
Q ss_pred CceeeEEEEecCCC---CCCC-----ChhhhHHHHHHHH----------hhcCCccEEEEEccceeecCCCCccccCCCC
Q 017914 121 LKNYTHLLVSIPPL---EGTG-----DPMLKHGELLRST----------LMNGHLQWLGYLSSTGVYGHSGGAWVDEDYP 182 (364)
Q Consensus 121 ~d~v~~~~~~~~~~---~~~~-----~~~~~~~~~l~~a----------~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~ 182 (364)
+|.++|+++..... ..+. +.......|+... ++. + .++|++||......
T Consensus 86 iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~m~~-~-G~Iv~isS~~~~~~----------- 152 (271)
T PRK06505 86 LDFVVHAIGFSDKNELKGRYADTTRENFSRTMVISCFSFTEIAKRAAKLMPD-G-GSMLTLTYGGSTRV----------- 152 (271)
T ss_pred CCEEEECCccCCCccccCChhhcCHHHHHHHHhhhhhhHHHHHHHHHHhhcc-C-ceEEEEcCCCcccc-----------
Confidence 78888888754211 0111 0111112232221 222 2 58999988643211
Q ss_pred CCCCChhHHHHHHHHHHHHHhhhh---cCCcEEEEEecceecCCCChH-H--HHHHhcCcccccccccCCcccccccHHH
Q 017914 183 ANPTTELGRLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRSSV-D--TIIKQLPLSEGQKMRRARQYTSRIHVDD 256 (364)
Q Consensus 183 ~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~i~v~D 256 (364)
......|+.+|.+.+.+.+.++.+ .|++++.|.||.+-.+....+ . ..... .....+ ..-+...+|
T Consensus 153 ~~~~~~Y~asKaAl~~l~r~la~el~~~gIrVn~v~PG~i~T~~~~~~~~~~~~~~~--~~~~~p------~~r~~~pee 224 (271)
T PRK06505 153 MPNYNVMGVAKAALEASVRYLAADYGPQGIRVNAISAGPVRTLAGAGIGDARAIFSY--QQRNSP------LRRTVTIDE 224 (271)
T ss_pred CCccchhhhhHHHHHHHHHHHHHHHhhcCeEEEEEecCCccccccccCcchHHHHHH--HhhcCC------ccccCCHHH
Confidence 112357999999999999888765 479999999998865431110 0 00000 000000 012356899
Q ss_pred HHHHHHHHccCCC---CCceEEEeCCC
Q 017914 257 ICQVLSASIDKPS---AWNVYNVVDDD 280 (364)
Q Consensus 257 va~~~~~~l~~~~---~g~~~~i~~~~ 280 (364)
+|++++.++.... .|+.+.+.+|.
T Consensus 225 va~~~~fL~s~~~~~itG~~i~vdgG~ 251 (271)
T PRK06505 225 VGGSALYLLSDLSSGVTGEIHFVDSGY 251 (271)
T ss_pred HHHHHHHHhCccccccCceEEeecCCc
Confidence 9999999987542 37788777664
|
|
| >PRK09009 C factor cell-cell signaling protein; Provisional | Back alignment and domain information |
|---|
Probab=99.42 E-value=9.5e-12 Score=107.51 Aligned_cols=193 Identities=10% Similarity=0.051 Sum_probs=121.6
Q ss_pred CeEEEEc-CChhhHHHHHHHHhCC--CEEEEEEeCchhhhhhhhCCceEEEccCChhhH-----HhhccCceeeEEEEec
Q 017914 60 NRMLILG-MGFVGRIFAEKIKNQG--WVVSGTCTNVMKKKELEQSGFDVHLFNANETAL-----MILTTLKNYTHLLVSI 131 (364)
Q Consensus 60 ~~vlVtG-tG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~-----~~~~~~d~v~~~~~~~ 131 (364)
|+|+||| +|+||++++++|+++| +.|+...|+.... ....++.++++|+++.+. ..+..+|+++|+++..
T Consensus 1 ~~vlItGas~gIG~~ia~~l~~~~~~~~v~~~~~~~~~~--~~~~~~~~~~~Dls~~~~~~~~~~~~~~id~li~~aG~~ 78 (235)
T PRK09009 1 MNILIVGGSGGIGKAMVKQLLERYPDATVHATYRHHKPD--FQHDNVQWHALDVTDEAEIKQLSEQFTQLDWLINCVGML 78 (235)
T ss_pred CEEEEECCCChHHHHHHHHHHHhCCCCEEEEEccCCccc--cccCceEEEEecCCCHHHHHHHHHhcCCCCEEEECCccc
Confidence 5899999 9999999999999985 5666666654322 222467889999998663 2346789999999876
Q ss_pred CCCC-----CCC--Ch---hhhHHHH----------HHHHhhcCCccEEEEEccceeecCCCCccccCCCCCCCCChhHH
Q 017914 132 PPLE-----GTG--DP---MLKHGEL----------LRSTLMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANPTTELGR 191 (364)
Q Consensus 132 ~~~~-----~~~--~~---~~~~~~~----------l~~a~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~~ 191 (364)
.... ... +. ......| +...++..+..+++++||.. +.... .+..+...|+.
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~~~i~~iss~~--~~~~~------~~~~~~~~Y~a 150 (235)
T PRK09009 79 HTQDKGPEKSLQALDADFFLQNITLNTLPSLLLAKHFTPKLKQSESAKFAVISAKV--GSISD------NRLGGWYSYRA 150 (235)
T ss_pred cccccCcccccccCCHHHHHHHHHHHhHHHHHHHHHHHhhccccCCceEEEEeecc--ccccc------CCCCCcchhhh
Confidence 4311 011 10 0111222 22223344456899888632 11110 01123457999
Q ss_pred HHHHHHHHHHHhhhh-----cCCcEEEEEecceecCCCChHHHHHHhcCcccccccccCCcccccccHHHHHHHHHHHcc
Q 017914 192 LRLSAEKGWLNLGRD-----LGISAQVFRLGGIYGPGRSSVDTIIKQLPLSEGQKMRRARQYTSRIHVDDICQVLSASID 266 (364)
Q Consensus 192 sK~~~E~~~~~~~~~-----~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~ 266 (364)
+|...+.+++.++.+ .++.+..+.||.+..+..... .... ....++..+|+|++++.++.
T Consensus 151 sK~a~~~~~~~la~e~~~~~~~i~v~~v~PG~v~t~~~~~~---~~~~------------~~~~~~~~~~~a~~~~~l~~ 215 (235)
T PRK09009 151 SKAALNMFLKTLSIEWQRSLKHGVVLALHPGTTDTALSKPF---QQNV------------PKGKLFTPEYVAQCLLGIIA 215 (235)
T ss_pred hHHHHHHHHHHHHHHhhcccCCeEEEEEcccceecCCCcch---hhcc------------ccCCCCCHHHHHHHHHHHHH
Confidence 999999999988743 378899999998876542211 0000 01224779999999999998
Q ss_pred CCC---CCceEEEe
Q 017914 267 KPS---AWNVYNVV 277 (364)
Q Consensus 267 ~~~---~g~~~~i~ 277 (364)
... .|..+.+.
T Consensus 216 ~~~~~~~g~~~~~~ 229 (235)
T PRK09009 216 NATPAQSGSFLAYD 229 (235)
T ss_pred cCChhhCCcEEeeC
Confidence 753 36565543
|
|
| >PRK08594 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.42 E-value=2e-11 Score=106.89 Aligned_cols=202 Identities=12% Similarity=0.054 Sum_probs=123.1
Q ss_pred CCCCeEEEEc-C--ChhhHHHHHHHHhCCCEEEEEEeCch---hhhhhh----hCCceEEEccCChhhH--Hh-------
Q 017914 57 QSPNRMLILG-M--GFVGRIFAEKIKNQGWVVSGTCTNVM---KKKELE----QSGFDVHLFNANETAL--MI------- 117 (364)
Q Consensus 57 ~~~~~vlVtG-t--G~iG~~l~~~L~~~g~~V~~~~r~~~---~~~~l~----~~~~~~~~~D~~~~~~--~~------- 117 (364)
..+++++||| + +.||++++++|+++|++|++..|+.. ..+.+. ..++.++.+|++|.+. ..
T Consensus 5 ~~~k~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 84 (257)
T PRK08594 5 LEGKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGERLEKEVRELADTLEGQESLLLPCDVTSDEEITACFETIKEE 84 (257)
T ss_pred cCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEecCcccchHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHHHHHh
Confidence 3468999998 6 79999999999999999999887532 222222 1346788999999763 11
Q ss_pred hccCceeeEEEEecCCC---CCCCC-hhh----hHHHHHH----------HHhhcCCccEEEEEccceeecCCCCccccC
Q 017914 118 LTTLKNYTHLLVSIPPL---EGTGD-PML----KHGELLR----------STLMNGHLQWLGYLSSTGVYGHSGGAWVDE 179 (364)
Q Consensus 118 ~~~~d~v~~~~~~~~~~---~~~~~-~~~----~~~~~l~----------~a~~~~~~~r~v~~Ss~~vy~~~~~~~~~E 179 (364)
+..+|.++|+++..... ....+ ... ....|+. ..++. -.++|++||....-
T Consensus 85 ~g~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~g~Iv~isS~~~~~--------- 153 (257)
T PRK08594 85 VGVIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMTE--GGSIVTLTYLGGER--------- 153 (257)
T ss_pred CCCccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhccc--CceEEEEcccCCcc---------
Confidence 24578899888654311 11111 111 1111221 11222 24899999864321
Q ss_pred CCCCCCCChhHHHHHHHHHHHHHhhhh---cCCcEEEEEecceecCCCChH---HHHHHhcCcccccccccCCccccccc
Q 017914 180 DYPANPTTELGRLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRSSV---DTIIKQLPLSEGQKMRRARQYTSRIH 253 (364)
Q Consensus 180 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~i~ 253 (364)
+......|+.+|.+.+.+.+.++.+ .|++++.|.||.+-.+..... ...... .... .....+..
T Consensus 154 --~~~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~--~~~~------~p~~r~~~ 223 (257)
T PRK08594 154 --VVQNYNVMGVAKASLEASVKYLANDLGKDGIRVNAISAGPIRTLSAKGVGGFNSILKE--IEER------APLRRTTT 223 (257)
T ss_pred --CCCCCchhHHHHHHHHHHHHHHHHHhhhcCCEEeeeecCcccCHhHhhhccccHHHHH--Hhhc------CCccccCC
Confidence 1112357999999999999888754 479999999998865421100 000000 0000 00122467
Q ss_pred HHHHHHHHHHHccCCC---CCceEEEeCC
Q 017914 254 VDDICQVLSASIDKPS---AWNVYNVVDD 279 (364)
Q Consensus 254 v~Dva~~~~~~l~~~~---~g~~~~i~~~ 279 (364)
.+|+|++++.++.... .|+.+.+.+|
T Consensus 224 p~~va~~~~~l~s~~~~~~tG~~~~~dgg 252 (257)
T PRK08594 224 QEEVGDTAAFLFSDLSRGVTGENIHVDSG 252 (257)
T ss_pred HHHHHHHHHHHcCcccccccceEEEECCc
Confidence 8999999999987543 3777777655
|
|
| >PRK08690 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.42 E-value=1.6e-11 Score=107.86 Aligned_cols=204 Identities=13% Similarity=0.058 Sum_probs=123.8
Q ss_pred CCCCeEEEEc---CChhhHHHHHHHHhCCCEEEEEEeCchhh---hhhhh--CCceEEEccCChhhH--Hh-------hc
Q 017914 57 QSPNRMLILG---MGFVGRIFAEKIKNQGWVVSGTCTNVMKK---KELEQ--SGFDVHLFNANETAL--MI-------LT 119 (364)
Q Consensus 57 ~~~~~vlVtG---tG~iG~~l~~~L~~~g~~V~~~~r~~~~~---~~l~~--~~~~~~~~D~~~~~~--~~-------~~ 119 (364)
..++++|||| ++.||+++++.|+++|++|++..|..... ..+.. .....+.+|++|.+. .. +.
T Consensus 4 ~~~k~~lITGa~~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 83 (261)
T PRK08690 4 LQGKKILITGMISERSIAYGIAKACREQGAELAFTYVVDKLEERVRKMAAELDSELVFRCDVASDDEINQVFADLGKHWD 83 (261)
T ss_pred cCCcEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCcHHHHHHHHHHHhccCCceEEECCCCCHHHHHHHHHHHHHHhC
Confidence 4567999998 35899999999999999999887753222 22221 234578999999663 11 24
Q ss_pred cCceeeEEEEecCCCC---C-CCC-hhhhH----HHHHHH----------HhhcCCccEEEEEccceeecCCCCccccCC
Q 017914 120 TLKNYTHLLVSIPPLE---G-TGD-PMLKH----GELLRS----------TLMNGHLQWLGYLSSTGVYGHSGGAWVDED 180 (364)
Q Consensus 120 ~~d~v~~~~~~~~~~~---~-~~~-~~~~~----~~~l~~----------a~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~ 180 (364)
.+|+++|+++...... . ..+ ....+ ..|+.. .++.. ..++|++||.+.+..
T Consensus 84 ~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~p~m~~~-~g~Iv~iss~~~~~~--------- 153 (261)
T PRK08690 84 GLDGLVHSIGFAPKEALSGDFLDSISREAFNTAHEISAYSLPALAKAARPMMRGR-NSAIVALSYLGAVRA--------- 153 (261)
T ss_pred CCcEEEECCccCCccccccchhhhcCHHHHHHHHHhchHHHHHHHHHHHHHhhhc-CcEEEEEcccccccC---------
Confidence 5899999987643210 0 010 11111 122221 12222 257999988653311
Q ss_pred CCCCCCChhHHHHHHHHHHHHHhhh---hcCCcEEEEEecceecCCCC-h--HHHHHHhcCcccccccccCCcccccccH
Q 017914 181 YPANPTTELGRLRLSAEKGWLNLGR---DLGISAQVFRLGGIYGPGRS-S--VDTIIKQLPLSEGQKMRRARQYTSRIHV 254 (364)
Q Consensus 181 ~~~~~~~~Y~~sK~~~E~~~~~~~~---~~~~~~~ilRp~~v~g~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~i~v 254 (364)
......|+.+|...+.+.+.++. ..|++++.|.||.+-.+... . ....... +.... ....+...
T Consensus 154 --~~~~~~Y~asKaal~~l~~~la~e~~~~gIrVn~i~PG~v~T~~~~~~~~~~~~~~~--~~~~~------p~~r~~~p 223 (261)
T PRK08690 154 --IPNYNVMGMAKASLEAGIRFTAACLGKEGIRCNGISAGPIKTLAASGIADFGKLLGH--VAAHN------PLRRNVTI 223 (261)
T ss_pred --CCCcccchhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccchhhhcCCchHHHHHH--HhhcC------CCCCCCCH
Confidence 11235799999999999888754 35899999999988654211 0 0111110 00000 01224678
Q ss_pred HHHHHHHHHHccCCC---CCceEEEeCCC
Q 017914 255 DDICQVLSASIDKPS---AWNVYNVVDDD 280 (364)
Q Consensus 255 ~Dva~~~~~~l~~~~---~g~~~~i~~~~ 280 (364)
+|+|++++.++.... .|+++.+.+|.
T Consensus 224 eevA~~v~~l~s~~~~~~tG~~i~vdgG~ 252 (261)
T PRK08690 224 EEVGNTAAFLLSDLSSGITGEITYVDGGY 252 (261)
T ss_pred HHHHHHHHHHhCcccCCcceeEEEEcCCc
Confidence 999999999998642 37788776663
|
|
| >PRK07984 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.41 E-value=2.5e-11 Score=106.49 Aligned_cols=204 Identities=15% Similarity=0.095 Sum_probs=122.9
Q ss_pred CCCCeEEEEc-CC--hhhHHHHHHHHhCCCEEEEEEeCch---hhhhhhh--CCceEEEccCChhhH--H----h---hc
Q 017914 57 QSPNRMLILG-MG--FVGRIFAEKIKNQGWVVSGTCTNVM---KKKELEQ--SGFDVHLFNANETAL--M----I---LT 119 (364)
Q Consensus 57 ~~~~~vlVtG-tG--~iG~~l~~~L~~~g~~V~~~~r~~~---~~~~l~~--~~~~~~~~D~~~~~~--~----~---~~ 119 (364)
..++++|||| ++ .||+++++.|+++|++|++..|+.. ..+.+.. .....+.+|++|++. . . +.
T Consensus 4 l~~k~~lITGas~~~GIG~aia~~la~~G~~vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g 83 (262)
T PRK07984 4 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLPCDVAEDASIDAMFAELGKVWP 83 (262)
T ss_pred cCCCEEEEeCCCCCccHHHHHHHHHHHCCCEEEEEecchhHHHHHHHHHhccCCceEeecCCCCHHHHHHHHHHHHhhcC
Confidence 4468999998 53 8999999999999999999888632 1222221 235678899999764 1 1 13
Q ss_pred cCceeeEEEEecCCCCC----CCC-hhh----hHHHHHH------HHh---hcCCccEEEEEccceeecCCCCccccCCC
Q 017914 120 TLKNYTHLLVSIPPLEG----TGD-PML----KHGELLR------STL---MNGHLQWLGYLSSTGVYGHSGGAWVDEDY 181 (364)
Q Consensus 120 ~~d~v~~~~~~~~~~~~----~~~-~~~----~~~~~l~------~a~---~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~ 181 (364)
.+|.++|+++....... ..+ ... ....|+. .++ ...+ .++|++||.+...
T Consensus 84 ~iD~linnAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-g~Iv~iss~~~~~----------- 151 (262)
T PRK07984 84 KFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPG-SALLTLSYLGAER----------- 151 (262)
T ss_pred CCCEEEECCccCCccccCCcchhhcCHHHHHHHhhhhhHHHHHHHHHHHHHhcCC-cEEEEEecCCCCC-----------
Confidence 47899999875432110 000 011 1111221 111 1222 4799998864321
Q ss_pred CCCCCChhHHHHHHHHHHHHHhhhh---cCCcEEEEEecceecCCCC---hHHHHHHhcCcccccccccCCcccccccHH
Q 017914 182 PANPTTELGRLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRS---SVDTIIKQLPLSEGQKMRRARQYTSRIHVD 255 (364)
Q Consensus 182 ~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~ 255 (364)
+......|+.+|...+.+.+.++.+ .|+++..|.||.+..+... ....+.... ... ....-+...+
T Consensus 152 ~~~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~~~~~~~~~~~~~~~--~~~------~p~~r~~~pe 223 (262)
T PRK07984 152 AIPNYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHC--EAV------TPIRRTVTIE 223 (262)
T ss_pred CCCCcchhHHHHHHHHHHHHHHHHHhcccCcEEeeeecCcccchHHhcCCchHHHHHHH--HHc------CCCcCCCCHH
Confidence 1112357999999999999988754 4799999999988553110 001111100 000 0011246789
Q ss_pred HHHHHHHHHccCCC---CCceEEEeCCC
Q 017914 256 DICQVLSASIDKPS---AWNVYNVVDDD 280 (364)
Q Consensus 256 Dva~~~~~~l~~~~---~g~~~~i~~~~ 280 (364)
|+|++++.++.... .|+.+.+.++.
T Consensus 224 dva~~~~~L~s~~~~~itG~~i~vdgg~ 251 (262)
T PRK07984 224 DVGNSAAFLCSDLSAGISGEVVHVDGGF 251 (262)
T ss_pred HHHHHHHHHcCcccccccCcEEEECCCc
Confidence 99999999987642 37778776663
|
|
| >PRK08177 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.41 E-value=1.2e-11 Score=106.19 Aligned_cols=156 Identities=14% Similarity=0.140 Sum_probs=102.5
Q ss_pred CCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhh-CCceEEEccCChhhH--Hh---h--ccCceeeEEEE
Q 017914 59 PNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQ-SGFDVHLFNANETAL--MI---L--TTLKNYTHLLV 129 (364)
Q Consensus 59 ~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~-~~~~~~~~D~~~~~~--~~---~--~~~d~v~~~~~ 129 (364)
|++|+||| +|+||++++++|+++|++|++++|++.+...+.. .++.++.+|++|.+. .. + ..+|.|+|+++
T Consensus 1 ~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~id~vi~~ag 80 (225)
T PRK08177 1 KRTALIIGASRGLGLGLVDRLLERGWQVTATVRGPQQDTALQALPGVHIEKLDMNDPASLDQLLQRLQGQRFDLLFVNAG 80 (225)
T ss_pred CCEEEEeCCCchHHHHHHHHHHhCCCEEEEEeCCCcchHHHHhccccceEEcCCCCHHHHHHHHHHhhcCCCCEEEEcCc
Confidence 46899999 9999999999999999999999998766544322 457788899999763 22 2 25899999987
Q ss_pred ecCCCCC-CCC-hhh----------hHHHHHHHHhh---cCCccEEEEEccceeecCCCCccccCCCCCCCCChhHHHHH
Q 017914 130 SIPPLEG-TGD-PML----------KHGELLRSTLM---NGHLQWLGYLSSTGVYGHSGGAWVDEDYPANPTTELGRLRL 194 (364)
Q Consensus 130 ~~~~~~~-~~~-~~~----------~~~~~l~~a~~---~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~~sK~ 194 (364)
....... ..+ ... ....++..++. ..+..+++++||. ++.... .+......|+.+|.
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~iv~~ss~--~g~~~~------~~~~~~~~Y~~sK~ 152 (225)
T PRK08177 81 ISGPAHQSAADATAAEIGQLFLTNAIAPIRLARRLLGQVRPGQGVLAFMSSQ--LGSVEL------PDGGEMPLYKASKA 152 (225)
T ss_pred ccCCCCCCcccCCHHHHhhheeeeeeHHHHHHHHHHHhhhhcCCEEEEEccC--cccccc------CCCCCccchHHHHH
Confidence 6532211 100 000 01112222222 1223578888874 222111 01113346999999
Q ss_pred HHHHHHHHhhhh---cCCcEEEEEecceecC
Q 017914 195 SAEKGWLNLGRD---LGISAQVFRLGGIYGP 222 (364)
Q Consensus 195 ~~E~~~~~~~~~---~~~~~~ilRp~~v~g~ 222 (364)
+.|.+++.++.+ .++.++.++||.+-.+
T Consensus 153 a~~~~~~~l~~e~~~~~i~v~~i~PG~i~t~ 183 (225)
T PRK08177 153 ALNSMTRSFVAELGEPTLTVLSMHPGWVKTD 183 (225)
T ss_pred HHHHHHHHHHHHhhcCCeEEEEEcCCceecC
Confidence 999999988654 4689999999988554
|
|
| >PRK07533 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.41 E-value=2.6e-11 Score=106.36 Aligned_cols=202 Identities=16% Similarity=0.122 Sum_probs=123.2
Q ss_pred CCCCeEEEEc-C--ChhhHHHHHHHHhCCCEEEEEEeCchhh---hhhhh--CCceEEEccCChhhH--H---h----hc
Q 017914 57 QSPNRMLILG-M--GFVGRIFAEKIKNQGWVVSGTCTNVMKK---KELEQ--SGFDVHLFNANETAL--M---I----LT 119 (364)
Q Consensus 57 ~~~~~vlVtG-t--G~iG~~l~~~L~~~g~~V~~~~r~~~~~---~~l~~--~~~~~~~~D~~~~~~--~---~----~~ 119 (364)
..++++|||| + +.||++++++|+++|++|++.+|+.+.. ..+.. ....++.+|++|.+. . . +.
T Consensus 8 ~~~k~~lItGas~g~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 87 (258)
T PRK07533 8 LAGKRGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDKARPYVEPLAEELDAPIFLPLDVREPGQLEAVFARIAEEWG 87 (258)
T ss_pred cCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHHHhhccceEEecCcCCHHHHHHHHHHHHHHcC
Confidence 4568999998 6 4899999999999999999999875432 22211 234678899999663 1 1 24
Q ss_pred cCceeeEEEEecCCC---CCCCC-----hhhhHHHHHH----------HHhhcCCccEEEEEccceeecCCCCccccCCC
Q 017914 120 TLKNYTHLLVSIPPL---EGTGD-----PMLKHGELLR----------STLMNGHLQWLGYLSSTGVYGHSGGAWVDEDY 181 (364)
Q Consensus 120 ~~d~v~~~~~~~~~~---~~~~~-----~~~~~~~~l~----------~a~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~ 181 (364)
.+|+++|+++..... ....+ .......|+. ..+++. .++|++||.....
T Consensus 88 ~ld~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~--g~Ii~iss~~~~~----------- 154 (258)
T PRK07533 88 RLDFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLAEPLMTNG--GSLLTMSYYGAEK----------- 154 (258)
T ss_pred CCCEEEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhccC--CEEEEEecccccc-----------
Confidence 579999988754321 11111 1111122222 222222 4799998854221
Q ss_pred CCCCCChhHHHHHHHHHHHHHhhhh---cCCcEEEEEecceecCCCCh---HHHHHHhcCcccccccccCCcccccccHH
Q 017914 182 PANPTTELGRLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRSS---VDTIIKQLPLSEGQKMRRARQYTSRIHVD 255 (364)
Q Consensus 182 ~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~i~v~ 255 (364)
+......|+.+|.+.+.+.+.++.+ .|+++..|.||.+-.+.... ....... .....+ ...+...+
T Consensus 155 ~~~~~~~Y~asKaal~~l~~~la~el~~~gI~Vn~v~PG~v~T~~~~~~~~~~~~~~~--~~~~~p------~~r~~~p~ 226 (258)
T PRK07533 155 VVENYNLMGPVKAALESSVRYLAAELGPKGIRVHAISPGPLKTRAASGIDDFDALLED--AAERAP------LRRLVDID 226 (258)
T ss_pred CCccchhhHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCCcCChhhhccCCcHHHHHH--HHhcCC------cCCCCCHH
Confidence 1112357999999999999888654 47999999999886542110 1111110 000000 11246789
Q ss_pred HHHHHHHHHccCC---CCCceEEEeCC
Q 017914 256 DICQVLSASIDKP---SAWNVYNVVDD 279 (364)
Q Consensus 256 Dva~~~~~~l~~~---~~g~~~~i~~~ 279 (364)
|+|++++.++... -.|+.+.+.++
T Consensus 227 dva~~~~~L~s~~~~~itG~~i~vdgg 253 (258)
T PRK07533 227 DVGAVAAFLASDAARRLTGNTLYIDGG 253 (258)
T ss_pred HHHHHHHHHhChhhccccCcEEeeCCc
Confidence 9999999998754 23777777655
|
|
| >PRK07370 enoyl-(acyl carrier protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=99.39 E-value=6e-11 Score=103.98 Aligned_cols=202 Identities=13% Similarity=0.062 Sum_probs=122.8
Q ss_pred CCCCeEEEEc-C--ChhhHHHHHHHHhCCCEEEEEEeCch------hhhhhhh--CCceEEEccCChhhH--Hh------
Q 017914 57 QSPNRMLILG-M--GFVGRIFAEKIKNQGWVVSGTCTNVM------KKKELEQ--SGFDVHLFNANETAL--MI------ 117 (364)
Q Consensus 57 ~~~~~vlVtG-t--G~iG~~l~~~L~~~g~~V~~~~r~~~------~~~~l~~--~~~~~~~~D~~~~~~--~~------ 117 (364)
..++++|||| + +.||++++++|.++|++|++..|+.+ ....+.+ ..+.++.+|++|.+. ..
T Consensus 4 l~~k~~lItGas~~~GIG~aia~~la~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~ 83 (258)
T PRK07370 4 LTGKKALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEKGRFEKKVRELTEPLNPSLFLPCDVQDDAQIEETFETIKQ 83 (258)
T ss_pred cCCcEEEEeCCCCCCchHHHHHHHHHHCCCEEEEEecCcccchHHHHHHHHHhccCcceEeecCcCCHHHHHHHHHHHHH
Confidence 3467899998 5 68999999999999999988765432 1222322 235678899999764 11
Q ss_pred -hccCceeeEEEEecCCC---CCCCC-hhhh----HH----------HHHHHHhhcCCccEEEEEccceeecCCCCcccc
Q 017914 118 -LTTLKNYTHLLVSIPPL---EGTGD-PMLK----HG----------ELLRSTLMNGHLQWLGYLSSTGVYGHSGGAWVD 178 (364)
Q Consensus 118 -~~~~d~v~~~~~~~~~~---~~~~~-~~~~----~~----------~~l~~a~~~~~~~r~v~~Ss~~vy~~~~~~~~~ 178 (364)
+..+|.++|+++..... ....+ .... .. +.+...+++. .++|++||.....
T Consensus 84 ~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~~--g~Iv~isS~~~~~-------- 153 (258)
T PRK07370 84 KWGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSEG--GSIVTLTYLGGVR-------- 153 (258)
T ss_pred HcCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhhC--CeEEEEecccccc--------
Confidence 23579999988754210 11111 0111 11 1222223332 5899999864221
Q ss_pred CCCCCCCCChhHHHHHHHHHHHHHhhhh---cCCcEEEEEecceecCCCChH---HHHHHhcCcccccccccCCcccccc
Q 017914 179 EDYPANPTTELGRLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRSSV---DTIIKQLPLSEGQKMRRARQYTSRI 252 (364)
Q Consensus 179 E~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~i 252 (364)
+......|+.+|.+.+.+.+.++.+ .|++++.+.||.+-.+....+ ...... +... ....-+.
T Consensus 154 ---~~~~~~~Y~asKaal~~l~~~la~el~~~gI~Vn~i~PG~v~T~~~~~~~~~~~~~~~--~~~~------~p~~r~~ 222 (258)
T PRK07370 154 ---AIPNYNVMGVAKAALEASVRYLAAELGPKNIRVNAISAGPIRTLASSAVGGILDMIHH--VEEK------APLRRTV 222 (258)
T ss_pred ---CCcccchhhHHHHHHHHHHHHHHHHhCcCCeEEEEEecCcccCchhhccccchhhhhh--hhhc------CCcCcCC
Confidence 1112357999999999999988754 479999999998865421100 010000 0000 0112246
Q ss_pred cHHHHHHHHHHHccCCC---CCceEEEeCC
Q 017914 253 HVDDICQVLSASIDKPS---AWNVYNVVDD 279 (364)
Q Consensus 253 ~v~Dva~~~~~~l~~~~---~g~~~~i~~~ 279 (364)
..+|+|.++..++.... .|+++.+.+|
T Consensus 223 ~~~dva~~~~fl~s~~~~~~tG~~i~vdgg 252 (258)
T PRK07370 223 TQTEVGNTAAFLLSDLASGITGQTIYVDAG 252 (258)
T ss_pred CHHHHHHHHHHHhChhhccccCcEEEECCc
Confidence 68999999999987543 3777777655
|
|
| >PRK06603 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.39 E-value=3.6e-11 Score=105.50 Aligned_cols=203 Identities=15% Similarity=0.009 Sum_probs=121.0
Q ss_pred CCCeEEEEc-CC--hhhHHHHHHHHhCCCEEEEEEeCchh---hhhhhhC-C-ceEEEccCChhhH--H-------hhcc
Q 017914 58 SPNRMLILG-MG--FVGRIFAEKIKNQGWVVSGTCTNVMK---KKELEQS-G-FDVHLFNANETAL--M-------ILTT 120 (364)
Q Consensus 58 ~~~~vlVtG-tG--~iG~~l~~~L~~~g~~V~~~~r~~~~---~~~l~~~-~-~~~~~~D~~~~~~--~-------~~~~ 120 (364)
.++.+|||| ++ .||.++++.|.++|++|++..|+... ...+... + ..++.+|++|++. . .+..
T Consensus 7 ~~k~~lITGas~~~GIG~a~a~~la~~G~~v~~~~r~~~~~~~~~~l~~~~g~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 86 (260)
T PRK06603 7 QGKKGLITGIANNMSISWAIAQLAKKHGAELWFTYQSEVLEKRVKPLAEEIGCNFVSELDVTNPKSISNLFDDIKEKWGS 86 (260)
T ss_pred CCcEEEEECCCCCcchHHHHHHHHHHcCCEEEEEeCchHHHHHHHHHHHhcCCceEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 457899998 65 79999999999999999998887321 2222211 2 3456899999764 1 1245
Q ss_pred CceeeEEEEecCCC---CCCCC-----hhhhHHHHHHHHhh--------cCCccEEEEEccceeecCCCCccccCCCCCC
Q 017914 121 LKNYTHLLVSIPPL---EGTGD-----PMLKHGELLRSTLM--------NGHLQWLGYLSSTGVYGHSGGAWVDEDYPAN 184 (364)
Q Consensus 121 ~d~v~~~~~~~~~~---~~~~~-----~~~~~~~~l~~a~~--------~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~ 184 (364)
+|+++|.++..... ....+ .......|+..... ...-.++|++||...... ..
T Consensus 87 iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~m~~~G~Iv~isS~~~~~~-----------~~ 155 (260)
T PRK06603 87 FDFLLHGMAFADKNELKGRYVDTSLENFHNSLHISCYSLLELSRSAEALMHDGGSIVTLTYYGAEKV-----------IP 155 (260)
T ss_pred ccEEEEccccCCcccccCccccCCHHHHHHHHHHHHHHHHHHHHHHHhhhccCceEEEEecCccccC-----------CC
Confidence 78888877643211 11111 11112223322211 011248999988643211 11
Q ss_pred CCChhHHHHHHHHHHHHHhhhh---cCCcEEEEEecceecCCCCh---HHHHHHhcCcccccccccCCcccccccHHHHH
Q 017914 185 PTTELGRLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRSS---VDTIIKQLPLSEGQKMRRARQYTSRIHVDDIC 258 (364)
Q Consensus 185 ~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva 258 (364)
....|+.+|...+.+.+.++.+ .|++++.+.||.+-.+.... ....... .....+ ..-+...+|+|
T Consensus 156 ~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~--~~~~~p------~~r~~~pedva 227 (260)
T PRK06603 156 NYNVMGVAKAALEASVKYLANDMGENNIRVNAISAGPIKTLASSAIGDFSTMLKS--HAATAP------LKRNTTQEDVG 227 (260)
T ss_pred cccchhhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcCcchhhhcCCCcHHHHHH--HHhcCC------cCCCCCHHHHH
Confidence 2357999999999999888754 47999999999885542100 0011110 000000 11246789999
Q ss_pred HHHHHHccCCC---CCceEEEeCC
Q 017914 259 QVLSASIDKPS---AWNVYNVVDD 279 (364)
Q Consensus 259 ~~~~~~l~~~~---~g~~~~i~~~ 279 (364)
++++.++.... .|+.+.+.+|
T Consensus 228 ~~~~~L~s~~~~~itG~~i~vdgG 251 (260)
T PRK06603 228 GAAVYLFSELSKGVTGEIHYVDCG 251 (260)
T ss_pred HHHHHHhCcccccCcceEEEeCCc
Confidence 99999997542 3777777665
|
|
| >PRK05599 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.38 E-value=6.4e-11 Score=103.08 Aligned_cols=189 Identities=13% Similarity=0.049 Sum_probs=120.8
Q ss_pred CeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhh----h---CCceEEEccCChhhH--H---h----hccCc
Q 017914 60 NRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELE----Q---SGFDVHLFNANETAL--M---I----LTTLK 122 (364)
Q Consensus 60 ~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~----~---~~~~~~~~D~~~~~~--~---~----~~~~d 122 (364)
|++|||| ++.||..++++|. +|++|++++|+.++.+.+. + ..+.++.+|++|.+. . . ...+|
T Consensus 1 ~~vlItGas~GIG~aia~~l~-~g~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id 79 (246)
T PRK05599 1 MSILILGGTSDIAGEIATLLC-HGEDVVLAARRPEAAQGLASDLRQRGATSVHVLSFDAQDLDTHRELVKQTQELAGEIS 79 (246)
T ss_pred CeEEEEeCccHHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEcccCCHHHHHHHHHHHHHhcCCCC
Confidence 6799999 8999999999998 5999999999877655432 1 136788999999764 1 1 13578
Q ss_pred eeeEEEEecCCCCC--CCCh--hhhHHHHH----------HHHhhcCC-ccEEEEEccceeecCCCCccccCCCCCCCCC
Q 017914 123 NYTHLLVSIPPLEG--TGDP--MLKHGELL----------RSTLMNGH-LQWLGYLSSTGVYGHSGGAWVDEDYPANPTT 187 (364)
Q Consensus 123 ~v~~~~~~~~~~~~--~~~~--~~~~~~~l----------~~a~~~~~-~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~ 187 (364)
.++|+++....... .... ......|+ ...+.+.+ -.++|++||...+-.. ....
T Consensus 80 ~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~~-----------~~~~ 148 (246)
T PRK05599 80 LAVVAFGILGDQERAETDEAHAVEIATVDYTAQVSMLTVLADELRAQTAPAAIVAFSSIAGWRAR-----------RANY 148 (246)
T ss_pred EEEEecCcCCCchhhhcCcHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCCEEEEEeccccccCC-----------cCCc
Confidence 88888765432211 1110 01111121 12222222 3589999986432111 1235
Q ss_pred hhHHHHHHHHHHHHHhhhh---cCCcEEEEEecceecCCCChHHHHHHhcCcccccccccCCcccccccHHHHHHHHHHH
Q 017914 188 ELGRLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRSSVDTIIKQLPLSEGQKMRRARQYTSRIHVDDICQVLSAS 264 (364)
Q Consensus 188 ~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~ 264 (364)
.|+.+|...+.+.+.++.+ .|++++.+.||.+..+.. .. .. ... . ....+|+|++++.+
T Consensus 149 ~Y~asKaa~~~~~~~la~el~~~~I~v~~v~PG~v~T~~~-------~~--~~-~~~-----~---~~~pe~~a~~~~~~ 210 (246)
T PRK05599 149 VYGSTKAGLDAFCQGLADSLHGSHVRLIIARPGFVIGSMT-------TG--MK-PAP-----M---SVYPRDVAAAVVSA 210 (246)
T ss_pred chhhHHHHHHHHHHHHHHHhcCCCceEEEecCCcccchhh-------cC--CC-CCC-----C---CCCHHHHHHHHHHH
Confidence 7999999999998887654 478999999998865421 00 00 000 0 14689999999999
Q ss_pred ccCCCCCceEEEeC
Q 017914 265 IDKPSAWNVYNVVD 278 (364)
Q Consensus 265 l~~~~~g~~~~i~~ 278 (364)
+.+...++.+.+.+
T Consensus 211 ~~~~~~~~~~~~~~ 224 (246)
T PRK05599 211 ITSSKRSTTLWIPG 224 (246)
T ss_pred HhcCCCCceEEeCc
Confidence 99875554555543
|
|
| >PRK08415 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.37 E-value=2.2e-11 Score=107.54 Aligned_cols=205 Identities=16% Similarity=0.069 Sum_probs=123.3
Q ss_pred CCCeEEEEc-C--ChhhHHHHHHHHhCCCEEEEEEeCch---hhhhhhh-CC-ceEEEccCChhhH--Hh-------hcc
Q 017914 58 SPNRMLILG-M--GFVGRIFAEKIKNQGWVVSGTCTNVM---KKKELEQ-SG-FDVHLFNANETAL--MI-------LTT 120 (364)
Q Consensus 58 ~~~~vlVtG-t--G~iG~~l~~~L~~~g~~V~~~~r~~~---~~~~l~~-~~-~~~~~~D~~~~~~--~~-------~~~ 120 (364)
.++++|||| + +.||+.+++.|+++|++|++..|+.. ..+.+.. .+ ...+.+|++|.+. .. +..
T Consensus 4 ~~k~~lItGas~~~GIG~aiA~~la~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~i~~~~g~ 83 (274)
T PRK08415 4 KGKKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNEALKKRVEPIAQELGSDYVYELDVSKPEHFKSLAESLKKDLGK 83 (274)
T ss_pred CCcEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCceEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 468999998 6 68999999999999999999998742 2222211 11 1578899999763 11 245
Q ss_pred CceeeEEEEecCCC---CCCCC-----hhhhHHHHHHHH----------hhcCCccEEEEEccceeecCCCCccccCCCC
Q 017914 121 LKNYTHLLVSIPPL---EGTGD-----PMLKHGELLRST----------LMNGHLQWLGYLSSTGVYGHSGGAWVDEDYP 182 (364)
Q Consensus 121 ~d~v~~~~~~~~~~---~~~~~-----~~~~~~~~l~~a----------~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~ 182 (364)
+|.++|+++..... ....+ .......|+... +++. .++|++||.+....
T Consensus 84 iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~--g~Iv~isS~~~~~~----------- 150 (274)
T PRK08415 84 IDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLNDG--ASVLTLSYLGGVKY----------- 150 (274)
T ss_pred CCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhccC--CcEEEEecCCCccC-----------
Confidence 78899888754211 11111 111122232222 2232 48999988642211
Q ss_pred CCCCChhHHHHHHHHHHHHHhhhh---cCCcEEEEEecceecCCCChHHHHHHhcCcccccccccCCcccccccHHHHHH
Q 017914 183 ANPTTELGRLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRSSVDTIIKQLPLSEGQKMRRARQYTSRIHVDDICQ 259 (364)
Q Consensus 183 ~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~ 259 (364)
......|+.+|.+.+.+.+.++.+ .|+++..|.||.+..+....+............. . ...-+...+|+|+
T Consensus 151 ~~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~---~--pl~r~~~pedva~ 225 (274)
T PRK08415 151 VPHYNVMGVAKAALESSVRYLAVDLGKKGIRVNAISAGPIKTLAASGIGDFRMILKWNEIN---A--PLKKNVSIEEVGN 225 (274)
T ss_pred CCcchhhhhHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccHHHhccchhhHHhhhhhhh---C--chhccCCHHHHHH
Confidence 112357999999999999988754 4799999999988653211000000000000000 0 0112367899999
Q ss_pred HHHHHccCC---CCCceEEEeCCC
Q 017914 260 VLSASIDKP---SAWNVYNVVDDD 280 (364)
Q Consensus 260 ~~~~~l~~~---~~g~~~~i~~~~ 280 (364)
+++.++... -.|+.+.+.+|.
T Consensus 226 ~v~fL~s~~~~~itG~~i~vdGG~ 249 (274)
T PRK08415 226 SGMYLLSDLSSGVTGEIHYVDAGY 249 (274)
T ss_pred HHHHHhhhhhhcccccEEEEcCcc
Confidence 999998754 347788777663
|
|
| >PRK08159 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.37 E-value=2.5e-11 Score=107.18 Aligned_cols=208 Identities=14% Similarity=0.034 Sum_probs=123.7
Q ss_pred CCCCeEEEEc-C--ChhhHHHHHHHHhCCCEEEEEEeCch---hhhhhhh--CCceEEEccCChhhH--H----h---hc
Q 017914 57 QSPNRMLILG-M--GFVGRIFAEKIKNQGWVVSGTCTNVM---KKKELEQ--SGFDVHLFNANETAL--M----I---LT 119 (364)
Q Consensus 57 ~~~~~vlVtG-t--G~iG~~l~~~L~~~g~~V~~~~r~~~---~~~~l~~--~~~~~~~~D~~~~~~--~----~---~~ 119 (364)
+.++++|||| + +.||.++++.|+++|++|++..|+.. ..+.+.+ .....+.+|++|.+. . . +.
T Consensus 8 ~~~k~~lItGas~~~GIG~aia~~la~~G~~V~l~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g 87 (272)
T PRK08159 8 MAGKRGLILGVANNRSIAWGIAKACRAAGAELAFTYQGDALKKRVEPLAAELGAFVAGHCDVTDEASIDAVFETLEKKWG 87 (272)
T ss_pred ccCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHHHHhcCCceEEecCCCCHHHHHHHHHHHHHhcC
Confidence 3457899998 5 78999999999999999998887632 2222221 224578899999663 1 1 23
Q ss_pred cCceeeEEEEecCCC---CCC-----CChhhhHHHHHHHHh------h--cCCccEEEEEccceeecCCCCccccCCCCC
Q 017914 120 TLKNYTHLLVSIPPL---EGT-----GDPMLKHGELLRSTL------M--NGHLQWLGYLSSTGVYGHSGGAWVDEDYPA 183 (364)
Q Consensus 120 ~~d~v~~~~~~~~~~---~~~-----~~~~~~~~~~l~~a~------~--~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~ 183 (364)
.+|.++|+++..... ... .+.......|+.... . ..+-.++|++||.+.... .
T Consensus 88 ~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~Iv~iss~~~~~~-----------~ 156 (272)
T PRK08159 88 KLDFVVHAIGFSDKDELTGRYVDTSRDNFTMTMDISVYSFTAVAQRAEKLMTDGGSILTLTYYGAEKV-----------M 156 (272)
T ss_pred CCcEEEECCcccCccccccCcccCCHHHHHHHHhHHHHHHHHHHHHHHHhcCCCceEEEEeccccccC-----------C
Confidence 578899888754311 111 111112223332221 1 111258999988543211 1
Q ss_pred CCCChhHHHHHHHHHHHHHhhhh---cCCcEEEEEecceecCCCChHHHHHHhcCcccccccccCCcccccccHHHHHHH
Q 017914 184 NPTTELGRLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRSSVDTIIKQLPLSEGQKMRRARQYTSRIHVDDICQV 260 (364)
Q Consensus 184 ~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~ 260 (364)
.....|+.+|...+.+.+.++.+ .|+++..|.||.+..+.................. . ...-+...+|+|++
T Consensus 157 p~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~---~--p~~r~~~peevA~~ 231 (272)
T PRK08159 157 PHYNVMGVAKAALEASVKYLAVDLGPKNIRVNAISAGPIKTLAASGIGDFRYILKWNEYN---A--PLRRTVTIEEVGDS 231 (272)
T ss_pred CcchhhhhHHHHHHHHHHHHHHHhcccCeEEEEeecCCcCCHHHhcCCcchHHHHHHHhC---C--cccccCCHHHHHHH
Confidence 12357999999999999888654 4799999999988653110000000000000000 0 01123678999999
Q ss_pred HHHHccCCC---CCceEEEeCCC
Q 017914 261 LSASIDKPS---AWNVYNVVDDD 280 (364)
Q Consensus 261 ~~~~l~~~~---~g~~~~i~~~~ 280 (364)
++.++.... .|+.+.+.+|.
T Consensus 232 ~~~L~s~~~~~itG~~i~vdgG~ 254 (272)
T PRK08159 232 ALYLLSDLSRGVTGEVHHVDSGY 254 (272)
T ss_pred HHHHhCccccCccceEEEECCCc
Confidence 999997543 37788877764
|
|
| >TIGR01289 LPOR light-dependent protochlorophyllide reductase | Back alignment and domain information |
|---|
Probab=99.37 E-value=1.9e-11 Score=110.19 Aligned_cols=205 Identities=14% Similarity=0.126 Sum_probs=121.7
Q ss_pred CCCeEEEEc-CChhhHHHHHHHHhCC-CEEEEEEeCchhhhhhhh------CCceEEEccCChhhH-----Hh----hcc
Q 017914 58 SPNRMLILG-MGFVGRIFAEKIKNQG-WVVSGTCTNVMKKKELEQ------SGFDVHLFNANETAL-----MI----LTT 120 (364)
Q Consensus 58 ~~~~vlVtG-tG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~l~~------~~~~~~~~D~~~~~~-----~~----~~~ 120 (364)
+++++|||| ++.||.+++++|+++| ++|++++|+.++...+.. ..+.++.+|+++.+. .. ...
T Consensus 2 ~~k~vlITGas~GIG~aia~~L~~~G~~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~ 81 (314)
T TIGR01289 2 QKPTVIITGASSGLGLYAAKALAATGEWHVIMACRDFLKAEQAAKSLGMPKDSYTIMHLDLGSLDSVRQFVQQFRESGRP 81 (314)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEcCCCCHHHHHHHHHHHHHhCCC
Confidence 467899999 9999999999999999 999999998765443321 245678899999663 11 135
Q ss_pred CceeeEEEEecCCCCCC---C--ChhhhHHHHH----------HHHhhcCC--ccEEEEEccceeecCCCC----cc---
Q 017914 121 LKNYTHLLVSIPPLEGT---G--DPMLKHGELL----------RSTLMNGH--LQWLGYLSSTGVYGHSGG----AW--- 176 (364)
Q Consensus 121 ~d~v~~~~~~~~~~~~~---~--~~~~~~~~~l----------~~a~~~~~--~~r~v~~Ss~~vy~~~~~----~~--- 176 (364)
+|.++|+++........ . +.......|+ +..++..+ ..++|++||...+..... .+
T Consensus 82 iD~lI~nAG~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~~~ 161 (314)
T TIGR01289 82 LDALVCNAAVYFPTAKEPRFTADGFELSVGTNHLGHFLLCNLLLDDLKNSPNKDKRLIIVGSITGNTNTLAGNVPPKANL 161 (314)
T ss_pred CCEEEECCCccccCccccccCHHHHHHHHhhhhhHHHHHHHHHHHHHHhCCCCCCeEEEEecCccccccCCCcCCCcccc
Confidence 78999988754321111 1 1111122222 33333332 369999999865432100 00
Q ss_pred ---------------ccCCCCCCCCChhHHHHHHHHHHHHHhhhh----cCCcEEEEEecceecCC--CChHHHHHHhcC
Q 017914 177 ---------------VDEDYPANPTTELGRLRLSAEKGWLNLGRD----LGISAQVFRLGGIYGPG--RSSVDTIIKQLP 235 (364)
Q Consensus 177 ---------------~~E~~~~~~~~~Y~~sK~~~E~~~~~~~~~----~~~~~~ilRp~~v~g~~--~~~~~~~~~~~~ 235 (364)
..+..+..+...|+.||.+...+.++++++ .|+.++.++||.+.... ............
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~T~l~~~~~~~~~~~~~ 241 (314)
T TIGR01289 162 GDLSGLAAGFKAPIAMIDGKEFKGAKAYKDSKVCNMLTVRELHRRFHDETGITFASLYPGCIADTGLFREHVPLFRTLFP 241 (314)
T ss_pred cccccccccCCCcccccCCCCcchhhhHHHhHHHHHHHHHHHHHHhccCCCeEEEEecCCcccCCcccccccHHHHHHHH
Confidence 011223345567999999988888777653 37999999999885221 111100000000
Q ss_pred cccccccccCCcccccccHHHHHHHHHHHccCC
Q 017914 236 LSEGQKMRRARQYTSRIHVDDICQVLSASIDKP 268 (364)
Q Consensus 236 ~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~ 268 (364)
.. .... ...+...++.|+.++.++...
T Consensus 242 ~~-~~~~-----~~~~~~~~~~a~~l~~~~~~~ 268 (314)
T TIGR01289 242 PF-QKYI-----TKGYVSEEEAGERLAQVVSDP 268 (314)
T ss_pred HH-HHHH-----hccccchhhhhhhhHHhhcCc
Confidence 00 0000 011367899999998887754
|
This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form. |
| >PRK06997 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.37 E-value=7.6e-11 Score=103.44 Aligned_cols=205 Identities=16% Similarity=0.086 Sum_probs=122.4
Q ss_pred CCCCeEEEEc-C--ChhhHHHHHHHHhCCCEEEEEEeCc---hhhhhhhh--CCceEEEccCChhhH--H-------hhc
Q 017914 57 QSPNRMLILG-M--GFVGRIFAEKIKNQGWVVSGTCTNV---MKKKELEQ--SGFDVHLFNANETAL--M-------ILT 119 (364)
Q Consensus 57 ~~~~~vlVtG-t--G~iG~~l~~~L~~~g~~V~~~~r~~---~~~~~l~~--~~~~~~~~D~~~~~~--~-------~~~ 119 (364)
..++++|||| + +.||.+++++|+++|++|++..|.. +....+.. .....+.+|++|++. . .+.
T Consensus 4 l~~k~vlItGas~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 83 (260)
T PRK06997 4 LAGKRILITGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFGSDLVFPCDVASDEQIDALFASLGQHWD 83 (260)
T ss_pred cCCcEEEEeCCCCCCcHHHHHHHHHHHCCCeEEEEccchHHHHHHHHHHHhcCCcceeeccCCCHHHHHHHHHHHHHHhC
Confidence 3458999998 3 6899999999999999999886542 22222221 223468899999763 1 124
Q ss_pred cCceeeEEEEecCCCC---C-CC-----ChhhhHHHHHHHHh------h--cCCccEEEEEccceeecCCCCccccCCCC
Q 017914 120 TLKNYTHLLVSIPPLE---G-TG-----DPMLKHGELLRSTL------M--NGHLQWLGYLSSTGVYGHSGGAWVDEDYP 182 (364)
Q Consensus 120 ~~d~v~~~~~~~~~~~---~-~~-----~~~~~~~~~l~~a~------~--~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~ 182 (364)
.+|.++|+++...... . .. +.......|+.... . -.+-.++|++||....- +
T Consensus 84 ~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~lp~m~~~g~Ii~iss~~~~~-----------~ 152 (260)
T PRK06997 84 GLDGLVHSIGFAPREAIAGDFLDGLSRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSYLGAER-----------V 152 (260)
T ss_pred CCcEEEEccccCCccccccccchhcCHHHHHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEecccccc-----------C
Confidence 5789999887543210 0 00 10111222322221 1 01225899998864321 1
Q ss_pred CCCCChhHHHHHHHHHHHHHhhhh---cCCcEEEEEecceecCCCChH---HHHHHhcCcccccccccCCcccccccHHH
Q 017914 183 ANPTTELGRLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRSSV---DTIIKQLPLSEGQKMRRARQYTSRIHVDD 256 (364)
Q Consensus 183 ~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~i~v~D 256 (364)
......|+.+|...+.+.+.++.+ .|++++.|.||.+-.+....+ ...... +....+ ..-+...+|
T Consensus 153 ~~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~~~~~~~~~~~~~~--~~~~~p------~~r~~~ped 224 (260)
T PRK06997 153 VPNYNTMGLAKASLEASVRYLAVSLGPKGIRANGISAGPIKTLAASGIKDFGKILDF--VESNAP------LRRNVTIEE 224 (260)
T ss_pred CCCcchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCccccchhccccchhhHHHH--HHhcCc------ccccCCHHH
Confidence 112356999999999999988754 479999999998865321100 010000 000000 112467899
Q ss_pred HHHHHHHHccCCC---CCceEEEeCCC
Q 017914 257 ICQVLSASIDKPS---AWNVYNVVDDD 280 (364)
Q Consensus 257 va~~~~~~l~~~~---~g~~~~i~~~~ 280 (364)
+|++++.++.... .|+++.+.++.
T Consensus 225 va~~~~~l~s~~~~~itG~~i~vdgg~ 251 (260)
T PRK06997 225 VGNVAAFLLSDLASGVTGEITHVDSGF 251 (260)
T ss_pred HHHHHHHHhCccccCcceeEEEEcCCh
Confidence 9999999987642 37788776653
|
|
| >PRK06484 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.35 E-value=4.4e-11 Score=115.73 Aligned_cols=207 Identities=12% Similarity=0.031 Sum_probs=125.6
Q ss_pred CCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhh---CCceEEEccCChhhH--Hh-------hccCcee
Q 017914 58 SPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQ---SGFDVHLFNANETAL--MI-------LTTLKNY 124 (364)
Q Consensus 58 ~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~---~~~~~~~~D~~~~~~--~~-------~~~~d~v 124 (364)
.++++|||| ++.||.+++++|.++|++|++++|+.++...+.. ..+.++.+|++|++. .. +..+|++
T Consensus 4 ~~k~~lITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~l 83 (520)
T PRK06484 4 QSRVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARERADSLGPDHHALAMDVSDEAQIREGFEQLHREFGRIDVL 83 (520)
T ss_pred CCeEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEeccCCHHHHHHHHHHHHHHhCCCCEE
Confidence 467999999 8999999999999999999999998776544432 245678999999763 22 2457999
Q ss_pred eEEEEecCCC-CCC-----CChhhhHHHHHH----------HHhhcCCc-cEEEEEccceeecCCCCccccCCCCCCCCC
Q 017914 125 THLLVSIPPL-EGT-----GDPMLKHGELLR----------STLMNGHL-QWLGYLSSTGVYGHSGGAWVDEDYPANPTT 187 (364)
Q Consensus 125 ~~~~~~~~~~-~~~-----~~~~~~~~~~l~----------~a~~~~~~-~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~ 187 (364)
+|+++..... ... .+.......|+. ..+.+.+. .++|++||........ ...
T Consensus 84 i~nag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~~iv~isS~~~~~~~~-----------~~~ 152 (520)
T PRK06484 84 VNNAGVTDPTMTATLDTTLEEFARLQAINLTGAYLVAREALRLMIEQGHGAAIVNVASGAGLVALP-----------KRT 152 (520)
T ss_pred EECCCcCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCeEEEECCcccCCCCC-----------CCc
Confidence 9988653211 111 111112222222 22222233 3899998865432211 235
Q ss_pred hhHHHHHHHHHHHHHhhhh---cCCcEEEEEecceecCCCChHHHHHHhcCcccccccccCCcccccccHHHHHHHHHHH
Q 017914 188 ELGRLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRSSVDTIIKQLPLSEGQKMRRARQYTSRIHVDDICQVLSAS 264 (364)
Q Consensus 188 ~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~ 264 (364)
.|+.+|...+.+.+.++.+ .+++++.+.||.+..+.... +....... ............+...+|+|++++.+
T Consensus 153 ~Y~asKaal~~l~~~la~e~~~~~i~v~~i~Pg~v~t~~~~~---~~~~~~~~-~~~~~~~~~~~~~~~~~~va~~v~~l 228 (520)
T PRK06484 153 AYSASKAAVISLTRSLACEWAAKGIRVNAVLPGYVRTQMVAE---LERAGKLD-PSAVRSRIPLGRLGRPEEIAEAVFFL 228 (520)
T ss_pred hHHHHHHHHHHHHHHHHHHhhhhCeEEEEEccCCcCchhhhh---hcccchhh-hHHHHhcCCCCCCcCHHHHHHHHHHH
Confidence 7999999999999887654 47999999999875543110 00000000 00000000011235789999999988
Q ss_pred ccCCC---CCceEEEeCC
Q 017914 265 IDKPS---AWNVYNVVDD 279 (364)
Q Consensus 265 l~~~~---~g~~~~i~~~ 279 (364)
+.... .|+++.+.++
T Consensus 229 ~~~~~~~~~G~~~~~~gg 246 (520)
T PRK06484 229 ASDQASYITGSTLVVDGG 246 (520)
T ss_pred hCccccCccCceEEecCC
Confidence 87542 2556555443
|
|
| >PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.35 E-value=6.5e-11 Score=112.35 Aligned_cols=206 Identities=13% Similarity=-0.007 Sum_probs=124.6
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchh--hhhh-hhCCceEEEccCChhhH--Hhh-------ccCce
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMK--KKEL-EQSGFDVHLFNANETAL--MIL-------TTLKN 123 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~--~~~l-~~~~~~~~~~D~~~~~~--~~~-------~~~d~ 123 (364)
..++++|||| +|.||..+++.|.++|++|++++|.... ...+ .+.+...+.+|++|.+. ..+ ..+|+
T Consensus 208 ~~g~~vlItGasggIG~~la~~l~~~Ga~vi~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~ 287 (450)
T PRK08261 208 LAGKVALVTGAARGIGAAIAEVLARDGAHVVCLDVPAAGEALAAVANRVGGTALALDITAPDAPARIAEHLAERHGGLDI 287 (450)
T ss_pred CCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHHHHhCCCCCE
Confidence 3568999999 8999999999999999999999885322 2222 12355788999999663 211 25799
Q ss_pred eeEEEEecCCCCCCC----ChhhhHHH------HHHHHhhc----CCccEEEEEccceeecCCCCccccCCCCCCCCChh
Q 017914 124 YTHLLVSIPPLEGTG----DPMLKHGE------LLRSTLMN----GHLQWLGYLSSTGVYGHSGGAWVDEDYPANPTTEL 189 (364)
Q Consensus 124 v~~~~~~~~~~~~~~----~~~~~~~~------~l~~a~~~----~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y 189 (364)
|+|+++......... +....... ++.+++.. ....+||++||...+.... ....|
T Consensus 288 vi~~AG~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~g~iv~~SS~~~~~g~~-----------~~~~Y 356 (450)
T PRK08261 288 VVHNAGITRDKTLANMDEARWDSVLAVNLLAPLRITEALLAAGALGDGGRIVGVSSISGIAGNR-----------GQTNY 356 (450)
T ss_pred EEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhhcCCCEEEEECChhhcCCCC-----------CChHH
Confidence 999987643321111 11111112 33333322 1236899999865332111 23579
Q ss_pred HHHHHHHHHHHHHhhhh---cCCcEEEEEecceecCCCChHHHHHHhcCcccccccccCCcccccccHHHHHHHHHHHcc
Q 017914 190 GRLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRSSVDTIIKQLPLSEGQKMRRARQYTSRIHVDDICQVLSASID 266 (364)
Q Consensus 190 ~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~ 266 (364)
+.+|...+.+++.++.+ .++.++.+.||.+-.+....+........ .....+ ......+|+|++++.++.
T Consensus 357 ~asKaal~~~~~~la~el~~~gi~v~~v~PG~i~t~~~~~~~~~~~~~~-~~~~~l------~~~~~p~dva~~~~~l~s 429 (450)
T PRK08261 357 AASKAGVIGLVQALAPLLAERGITINAVAPGFIETQMTAAIPFATREAG-RRMNSL------QQGGLPVDVAETIAWLAS 429 (450)
T ss_pred HHHHHHHHHHHHHHHHHHhhhCcEEEEEEeCcCcchhhhccchhHHHHH-hhcCCc------CCCCCHHHHHHHHHHHhC
Confidence 99999888888877643 48999999999874322111110000000 000000 111346899999998887
Q ss_pred CCC---CCceEEEeCCC
Q 017914 267 KPS---AWNVYNVVDDD 280 (364)
Q Consensus 267 ~~~---~g~~~~i~~~~ 280 (364)
... .|+++.++++.
T Consensus 430 ~~~~~itG~~i~v~g~~ 446 (450)
T PRK08261 430 PASGGVTGNVVRVCGQS 446 (450)
T ss_pred hhhcCCCCCEEEECCCc
Confidence 543 37888887653
|
|
| >PLN02780 ketoreductase/ oxidoreductase | Back alignment and domain information |
|---|
Probab=99.34 E-value=2.1e-11 Score=110.03 Aligned_cols=183 Identities=9% Similarity=-0.065 Sum_probs=118.5
Q ss_pred CCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhh--------CCceEEEccCCh--hhH-----Hhhcc-
Q 017914 58 SPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQ--------SGFDVHLFNANE--TAL-----MILTT- 120 (364)
Q Consensus 58 ~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~--------~~~~~~~~D~~~--~~~-----~~~~~- 120 (364)
.++.++||| +|.||++++++|+++|++|++++|+.++.+.+.+ ..+..+.+|+++ .+. +.+.+
T Consensus 52 ~g~~~lITGAs~GIG~alA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~l~~~~~~~ 131 (320)
T PLN02780 52 YGSWALVTGPTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSGDIDEGVKRIKETIEGL 131 (320)
T ss_pred cCCEEEEeCCCcHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCCCcHHHHHHHHHHhcCC
Confidence 357999999 9999999999999999999999999876554321 235667889985 221 22333
Q ss_pred -CceeeEEEEecCCC-CCCCC-h----hhhHHHHHHH----------HhhcCCccEEEEEccceeecCCCCccccCCCCC
Q 017914 121 -LKNYTHLLVSIPPL-EGTGD-P----MLKHGELLRS----------TLMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPA 183 (364)
Q Consensus 121 -~d~v~~~~~~~~~~-~~~~~-~----~~~~~~~l~~----------a~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~ 183 (364)
+|.++|+++..... ....+ . ......|+.. .+.+.+..++|++||...+.... .
T Consensus 132 didilVnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~---------~ 202 (320)
T PLN02780 132 DVGVLINNVGVSYPYARFFHEVDEELLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIINIGSGAAIVIPS---------D 202 (320)
T ss_pred CccEEEEecCcCCCCCcccccCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCcEEEEEechhhccCCC---------C
Confidence 45888888754321 11111 1 1112223322 23345567899999875432100 0
Q ss_pred CCCChhHHHHHHHHHHHHHhhhh---cCCcEEEEEecceecCCCChHHHHHHhcCcccccccccCCcccccccHHHHHHH
Q 017914 184 NPTTELGRLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRSSVDTIIKQLPLSEGQKMRRARQYTSRIHVDDICQV 260 (364)
Q Consensus 184 ~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~ 260 (364)
.....|+.+|...+.+.+.++.+ .|++++++.||.+-.+-.. .. .. . ......+++|+.
T Consensus 203 p~~~~Y~aSKaal~~~~~~L~~El~~~gI~V~~v~PG~v~T~~~~-------~~---~~-------~-~~~~~p~~~A~~ 264 (320)
T PLN02780 203 PLYAVYAATKAYIDQFSRCLYVEYKKSGIDVQCQVPLYVATKMAS-------IR---RS-------S-FLVPSSDGYARA 264 (320)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHhccCeEEEEEeeCceecCccc-------cc---CC-------C-CCCCCHHHHHHH
Confidence 12368999999999999888654 4899999999998654211 00 00 0 112578999999
Q ss_pred HHHHccC
Q 017914 261 LSASIDK 267 (364)
Q Consensus 261 ~~~~l~~ 267 (364)
++..+.+
T Consensus 265 ~~~~~~~ 271 (320)
T PLN02780 265 ALRWVGY 271 (320)
T ss_pred HHHHhCC
Confidence 9999964
|
|
| >PRK12367 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.33 E-value=6.4e-11 Score=102.73 Aligned_cols=179 Identities=12% Similarity=-0.002 Sum_probs=106.7
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchh-hhhhhhCCceEEEccCChhhH--HhhccCceeeEEEEecC
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMK-KKELEQSGFDVHLFNANETAL--MILTTLKNYTHLLVSIP 132 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~-~~~l~~~~~~~~~~D~~~~~~--~~~~~~d~v~~~~~~~~ 132 (364)
..++++|||| +|+||++++++|+++|++|++++|+... ...........+.+|++|.+. ..+..+|.++|+++...
T Consensus 12 l~~k~~lITGas~gIG~ala~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~iDilVnnAG~~~ 91 (245)
T PRK12367 12 WQGKRIGITGASGALGKALTKAFRAKGAKVIGLTHSKINNSESNDESPNEWIKWECGKEESLDKQLASLDVLILNHGINP 91 (245)
T ss_pred hCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEECCchhhhhhhccCCCeEEEeeCCCHHHHHHhcCCCCEEEECCccCC
Confidence 4568999999 9999999999999999999999997622 211111223578899999764 55678999999997533
Q ss_pred CCCC-CCChhhhHHHHHHHH----------hhcC---CccEEEEEccceeecCCCCccccCCCCCCCCChhHHHHHHHHH
Q 017914 133 PLEG-TGDPMLKHGELLRST----------LMNG---HLQWLGYLSSTGVYGHSGGAWVDEDYPANPTTELGRLRLSAEK 198 (364)
Q Consensus 133 ~~~~-~~~~~~~~~~~l~~a----------~~~~---~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~~sK~~~E~ 198 (364)
.... ..+.......|+... +... +...++..||.+.... . ....|+.||...+.
T Consensus 92 ~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~g~~iiv~ss~a~~~~-----------~-~~~~Y~aSKaal~~ 159 (245)
T PRK12367 92 GGRQDPENINKALEINALSSWRLLELFEDIALNNNSQIPKEIWVNTSEAEIQP-----------A-LSPSYEISKRLIGQ 159 (245)
T ss_pred cCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccCCCeEEEEEecccccCC-----------C-CCchhHHHHHHHHH
Confidence 2211 112222223333222 1121 1122333344321111 0 22469999999754
Q ss_pred HH---HHhh---hhcCCcEEEEEecceecCCCChHHHHHHhcCcccccccccCCcccccccHHHHHHHHHHHccCCCC
Q 017914 199 GW---LNLG---RDLGISAQVFRLGGIYGPGRSSVDTIIKQLPLSEGQKMRRARQYTSRIHVDDICQVLSASIDKPSA 270 (364)
Q Consensus 199 ~~---~~~~---~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~~ 270 (364)
+. +++. .+.++.+..+.||.+..+. . . ...+..+|+|+.++.++++...
T Consensus 160 ~~~l~~~l~~e~~~~~i~v~~~~pg~~~t~~-------------~---~-------~~~~~~~~vA~~i~~~~~~~~~ 214 (245)
T PRK12367 160 LVSLKKNLLDKNERKKLIIRKLILGPFRSEL-------------N---P-------IGIMSADFVAKQILDQANLGLY 214 (245)
T ss_pred HHHHHHHHHHhhcccccEEEEecCCCccccc-------------C---c-------cCCCCHHHHHHHHHHHHhcCCc
Confidence 33 2221 2347777777776642211 0 0 0136789999999999976543
|
|
| >PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.33 E-value=1.2e-10 Score=107.32 Aligned_cols=178 Identities=11% Similarity=-0.041 Sum_probs=107.7
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhh---hCCceEEEccCChhhH--HhhccCceeeEEEEe
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELE---QSGFDVHLFNANETAL--MILTTLKNYTHLLVS 130 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~---~~~~~~~~~D~~~~~~--~~~~~~d~v~~~~~~ 130 (364)
..+++|+||| +|+||++++++|.++|++|++++|+.++..... ..++..+.+|++|.+. +.+.++|.++|+++.
T Consensus 176 l~gK~VLITGASgGIG~aLA~~La~~G~~Vi~l~r~~~~l~~~~~~~~~~v~~v~~Dvsd~~~v~~~l~~IDiLInnAGi 255 (406)
T PRK07424 176 LKGKTVAVTGASGTLGQALLKELHQQGAKVVALTSNSDKITLEINGEDLPVKTLHWQVGQEAALAELLEKVDILIINHGI 255 (406)
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhcCCCeEEEEeeCCCHHHHHHHhCCCCEEEECCCc
Confidence 4568999999 999999999999999999999999865543211 1235678899999764 566789999998875
Q ss_pred cCCCCC-CCChhhhHHHHHHHH------h----hcCC----ccEEEEEccceeecCCCCccccCCCCCCCCChhHHHHHH
Q 017914 131 IPPLEG-TGDPMLKHGELLRST------L----MNGH----LQWLGYLSSTGVYGHSGGAWVDEDYPANPTTELGRLRLS 195 (364)
Q Consensus 131 ~~~~~~-~~~~~~~~~~~l~~a------~----~~~~----~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~~sK~~ 195 (364)
...... .++.......|+... + +..+ ...+|.+|+.... + .....|+.+|.+
T Consensus 256 ~~~~~~s~e~~~~~~~vNv~g~i~Li~a~lp~m~~~~~~~~~~iiVn~Ssa~~~------------~-~~~~~Y~ASKaA 322 (406)
T PRK07424 256 NVHGERTPEAINKSYEVNTFSAWRLMELFFTTVKTNRDKATKEVWVNTSEAEVN------------P-AFSPLYELSKRA 322 (406)
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCeEEEEEcccccc------------C-CCchHHHHHHHH
Confidence 332111 111122222333222 2 2222 1235555542210 1 012469999999
Q ss_pred HHHHHHHhhhhcCCcEEEEEecceecCCCChHHHHHHhcCcccccccccCCcccccccHHHHHHHHHHHccCCCC
Q 017914 196 AEKGWLNLGRDLGISAQVFRLGGIYGPGRSSVDTIIKQLPLSEGQKMRRARQYTSRIHVDDICQVLSASIDKPSA 270 (364)
Q Consensus 196 ~E~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~~ 270 (364)
.+.+..-.....+..+..+.||.+..+ + . ....+..+|+|+.++.+++++..
T Consensus 323 l~~l~~l~~~~~~~~I~~i~~gp~~t~----~---------~----------~~~~~spe~vA~~il~~i~~~~~ 374 (406)
T PRK07424 323 LGDLVTLRRLDAPCVVRKLILGPFKSN----L---------N----------PIGVMSADWVAKQILKLAKRDFR 374 (406)
T ss_pred HHHHHHHHHhCCCCceEEEEeCCCcCC----C---------C----------cCCCCCHHHHHHHHHHHHHCCCC
Confidence 988753222233444544444432110 0 0 01137899999999999987654
|
|
| >KOG4039 consensus Serine/threonine kinase TIP30/CC3 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.33 E-value=2.1e-11 Score=95.26 Aligned_cols=151 Identities=11% Similarity=0.008 Sum_probs=110.0
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCC--CEEEEEEeCchhhhhhhhCCceEEEccCChhhH--HhhccCceeeEEEEec
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQG--WVVSGTCTNVMKKKELEQSGFDVHLFNANETAL--MILTTLKNYTHLLVSI 131 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~--~~~~~~d~v~~~~~~~ 131 (364)
+.+|.++|+| ||-.|+.+++.+++.+ -+|+++.|+....+. ....+.....|....+. ..+.+.|+.+.+.+..
T Consensus 16 mq~~s~fvlGAtG~~G~~llk~~~E~~~FSKV~~i~RR~~~d~a-t~k~v~q~~vDf~Kl~~~a~~~qg~dV~FcaLgTT 94 (238)
T KOG4039|consen 16 MQNMSGFVLGATGLCGGGLLKHAQEAPQFSKVYAILRRELPDPA-TDKVVAQVEVDFSKLSQLATNEQGPDVLFCALGTT 94 (238)
T ss_pred hhccceEEEeccccccHHHHHHHHhcccceeEEEEEeccCCCcc-ccceeeeEEechHHHHHHHhhhcCCceEEEeeccc
Confidence 4568999999 9999999999999997 489999997522211 12456666777776442 6778999999988876
Q ss_pred CCCCCCCCh---hhhHHHHHHHHhhcCCccEEEEEccceeecCCCCccccCCCCCCCCChhHHHHHHHHHHHHHhhhhcC
Q 017914 132 PPLEGTGDP---MLKHGELLRSTLMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANPTTELGRLRLSAEKGWLNLGRDLG 208 (364)
Q Consensus 132 ~~~~~~~~~---~~~~~~~l~~a~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~ 208 (364)
......+.. .-++.-.+.+++++.|+|+|+.+||.+.-.+ ....|...|-+.|+-+.++--+
T Consensus 95 RgkaGadgfykvDhDyvl~~A~~AKe~Gck~fvLvSS~GAd~s-------------SrFlY~k~KGEvE~~v~eL~F~-- 159 (238)
T KOG4039|consen 95 RGKAGADGFYKVDHDYVLQLAQAAKEKGCKTFVLVSSAGADPS-------------SRFLYMKMKGEVERDVIELDFK-- 159 (238)
T ss_pred ccccccCceEeechHHHHHHHHHHHhCCCeEEEEEeccCCCcc-------------cceeeeeccchhhhhhhhcccc--
Confidence 654442221 1233445667788999999999999864211 2246999999999988765322
Q ss_pred CcEEEEEecceecCCC
Q 017914 209 ISAQVFRLGGIYGPGR 224 (364)
Q Consensus 209 ~~~~ilRp~~v~g~~~ 224 (364)
+++|+|||.+.|...
T Consensus 160 -~~~i~RPG~ll~~R~ 174 (238)
T KOG4039|consen 160 -HIIILRPGPLLGERT 174 (238)
T ss_pred -EEEEecCcceecccc
Confidence 589999999999764
|
|
| >TIGR01500 sepiapter_red sepiapterin reductase | Back alignment and domain information |
|---|
Probab=99.32 E-value=6.7e-11 Score=103.60 Aligned_cols=193 Identities=10% Similarity=-0.004 Sum_probs=115.0
Q ss_pred eEEEEc-CChhhHHHHHHHHh----CCCEEEEEEeCchhhhhhh----h----CCceEEEccCChhhH--Hhh----cc-
Q 017914 61 RMLILG-MGFVGRIFAEKIKN----QGWVVSGTCTNVMKKKELE----Q----SGFDVHLFNANETAL--MIL----TT- 120 (364)
Q Consensus 61 ~vlVtG-tG~iG~~l~~~L~~----~g~~V~~~~r~~~~~~~l~----~----~~~~~~~~D~~~~~~--~~~----~~- 120 (364)
.+|||| +|.||.+++++|.+ .|++|+++.|+.+....+. . ..+.++.+|++|.+. ..+ +.
T Consensus 2 ~vlItGas~GIG~~~a~~la~~~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~ 81 (256)
T TIGR01500 2 VCLVTGASRGFGRTIAQELAKCLKSPGSVLVLSARNDEALRQLKAEIGAERSGLRVVRVSLDLGAEAGLEQLLKALRELP 81 (256)
T ss_pred EEEEecCCCchHHHHHHHHHHhhccCCcEEEEEEcCHHHHHHHHHHHHhcCCCceEEEEEeccCCHHHHHHHHHHHHhcc
Confidence 589999 99999999999997 7999999999876544331 1 246788999999663 211 11
Q ss_pred ------CceeeEEEEecCCCCC-C---CC---hhhhHHHHHH----------HHhhcC-C-ccEEEEEccceeecCCCCc
Q 017914 121 ------LKNYTHLLVSIPPLEG-T---GD---PMLKHGELLR----------STLMNG-H-LQWLGYLSSTGVYGHSGGA 175 (364)
Q Consensus 121 ------~d~v~~~~~~~~~~~~-~---~~---~~~~~~~~l~----------~a~~~~-~-~~r~v~~Ss~~vy~~~~~~ 175 (364)
.|.++|+++....... . .+ .......|+. ..++.. + ..++|++||...+..
T Consensus 82 g~~~~~~~~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~~~l~~~~~~~~~iv~isS~~~~~~---- 157 (256)
T TIGR01500 82 RPKGLQRLLLINNAGTLGDVSKGFVDLSDSTQVQNYWALNLTSMLCLTSSVLKAFKDSPGLNRTVVNISSLCAIQP---- 157 (256)
T ss_pred ccCCCceEEEEeCCcccCccccccccCCCHHHHHHHHHhhhHHHHHHHHHHHHHHhhcCCCCCEEEEECCHHhCCC----
Confidence 2477887765322111 1 11 1112222332 222222 2 358999998754321
Q ss_pred cccCCCCCCCCChhHHHHHHHHHHHHHhhhh---cCCcEEEEEecceecCCCChHHHHHHhcCccc-ccccccCCccccc
Q 017914 176 WVDEDYPANPTTELGRLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRSSVDTIIKQLPLSE-GQKMRRARQYTSR 251 (364)
Q Consensus 176 ~~~E~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 251 (364)
......|+.+|...+.+.+.++.+ .++.++.+.||.+-.+. ...+.....-.. ...........-+
T Consensus 158 -------~~~~~~Y~asKaal~~l~~~la~e~~~~~i~v~~v~PG~v~T~~---~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (256)
T TIGR01500 158 -------FKGWALYCAGKAARDMLFQVLALEEKNPNVRVLNYAPGVLDTDM---QQQVREESVDPDMRKGLQELKAKGKL 227 (256)
T ss_pred -------CCCchHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecCCcccchH---HHHHHHhcCChhHHHHHHHHHhcCCC
Confidence 113357999999999999887654 47999999999885432 111111000000 0000000001124
Q ss_pred ccHHHHHHHHHHHccC
Q 017914 252 IHVDDICQVLSASIDK 267 (364)
Q Consensus 252 i~v~Dva~~~~~~l~~ 267 (364)
...+|+|++++.++++
T Consensus 228 ~~p~eva~~~~~l~~~ 243 (256)
T TIGR01500 228 VDPKVSAQKLLSLLEK 243 (256)
T ss_pred CCHHHHHHHHHHHHhc
Confidence 7789999999999964
|
This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs. |
| >PRK07889 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.29 E-value=3.1e-10 Score=99.35 Aligned_cols=202 Identities=13% Similarity=0.038 Sum_probs=122.1
Q ss_pred CCCCeEEEEc---CChhhHHHHHHHHhCCCEEEEEEeCc--hhhhhhhh---CCceEEEccCChhhH--Hh-------hc
Q 017914 57 QSPNRMLILG---MGFVGRIFAEKIKNQGWVVSGTCTNV--MKKKELEQ---SGFDVHLFNANETAL--MI-------LT 119 (364)
Q Consensus 57 ~~~~~vlVtG---tG~iG~~l~~~L~~~g~~V~~~~r~~--~~~~~l~~---~~~~~~~~D~~~~~~--~~-------~~ 119 (364)
..+++++||| ++.||.+++++|+++|++|++.+|+. +..+.+.. ..+.++.+|++|.+. .. +.
T Consensus 5 ~~~k~~lItGa~~s~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g 84 (256)
T PRK07889 5 LEGKRILVTGVITDSSIAFHVARVAQEQGAEVVLTGFGRALRLTERIAKRLPEPAPVLELDVTNEEHLASLADRVREHVD 84 (256)
T ss_pred ccCCEEEEeCCCCcchHHHHHHHHHHHCCCEEEEecCccchhHHHHHHHhcCCCCcEEeCCCCCHHHHHHHHHHHHHHcC
Confidence 3457899998 47999999999999999999998764 22222221 246789999999763 11 24
Q ss_pred cCceeeEEEEecCCC---CCC-C----ChhhhHHHHHHHH----------hhcCCccEEEEEccceeecCCCCccccCCC
Q 017914 120 TLKNYTHLLVSIPPL---EGT-G----DPMLKHGELLRST----------LMNGHLQWLGYLSSTGVYGHSGGAWVDEDY 181 (364)
Q Consensus 120 ~~d~v~~~~~~~~~~---~~~-~----~~~~~~~~~l~~a----------~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~ 181 (364)
.+|.++|+++..... ... . +.......|+... ++. -.++|++|+.+..+
T Consensus 85 ~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~--~g~Iv~is~~~~~~----------- 151 (256)
T PRK07889 85 GLDGVVHSIGFAPQSALGGNFLDAPWEDVATALHVSAYSLKSLAKALLPLMNE--GGSIVGLDFDATVA----------- 151 (256)
T ss_pred CCcEEEEccccccccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhccc--CceEEEEeeccccc-----------
Confidence 579999988764321 011 1 1111122333222 222 24788887532110
Q ss_pred CCCCCChhHHHHHHHHHHHHHhhhh---cCCcEEEEEecceecCCCChH---HHHHHhcCcccccccccCCcccccccHH
Q 017914 182 PANPTTELGRLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRSSV---DTIIKQLPLSEGQKMRRARQYTSRIHVD 255 (364)
Q Consensus 182 ~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~i~v~ 255 (364)
......|+.+|...+.+.+.++.+ .|++++.|.||.+-.+....+ ...... +....+. .+.+...+
T Consensus 152 -~~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~--~~~~~p~-----~~~~~~p~ 223 (256)
T PRK07889 152 -WPAYDWMGVAKAALESTNRYLARDLGPRGIRVNLVAAGPIRTLAAKAIPGFELLEEG--WDERAPL-----GWDVKDPT 223 (256)
T ss_pred -CCccchhHHHHHHHHHHHHHHHHHhhhcCeEEEeeccCcccChhhhcccCcHHHHHH--HHhcCcc-----ccccCCHH
Confidence 112346899999999999888654 479999999998865421100 000000 0000000 01246789
Q ss_pred HHHHHHHHHccCCC---CCceEEEeCC
Q 017914 256 DICQVLSASIDKPS---AWNVYNVVDD 279 (364)
Q Consensus 256 Dva~~~~~~l~~~~---~g~~~~i~~~ 279 (364)
|+|++++.++.... .|+++.+.++
T Consensus 224 evA~~v~~l~s~~~~~~tG~~i~vdgg 250 (256)
T PRK07889 224 PVARAVVALLSDWFPATTGEIVHVDGG 250 (256)
T ss_pred HHHHHHHHHhCcccccccceEEEEcCc
Confidence 99999999997642 3777776554
|
|
| >smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain | Back alignment and domain information |
|---|
Probab=99.24 E-value=2.1e-10 Score=94.24 Aligned_cols=148 Identities=16% Similarity=0.100 Sum_probs=99.2
Q ss_pred CeEEEEc-CChhhHHHHHHHHhCCC-EEEEEEeCchhhhh-------hhh--CCceEEEccCChhhH--Hhh-------c
Q 017914 60 NRMLILG-MGFVGRIFAEKIKNQGW-VVSGTCTNVMKKKE-------LEQ--SGFDVHLFNANETAL--MIL-------T 119 (364)
Q Consensus 60 ~~vlVtG-tG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~-------l~~--~~~~~~~~D~~~~~~--~~~-------~ 119 (364)
++++|+| +|+||.+++++|.++|+ .|+.+.|+...... +.. .++.++.+|+++.+. ..+ .
T Consensus 1 ~~~li~Ga~~~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 80 (180)
T smart00822 1 GTYLITGGLGGLGLELARWLAERGARHLVLLSRSGPDAPGAAELLAELEALGAEVTVVACDVADRAALAAALAAIPARLG 80 (180)
T ss_pred CEEEEEcCCChHHHHHHHHHHHhhCCeEEEEeCCCCCCccHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 4789998 99999999999999986 68888886544321 111 345678899998653 222 3
Q ss_pred cCceeeEEEEecCCCCCC----C------ChhhhHHHHHHHHhhcCCccEEEEEcccee-ecCCCCccccCCCCCCCCCh
Q 017914 120 TLKNYTHLLVSIPPLEGT----G------DPMLKHGELLRSTLMNGHLQWLGYLSSTGV-YGHSGGAWVDEDYPANPTTE 188 (364)
Q Consensus 120 ~~d~v~~~~~~~~~~~~~----~------~~~~~~~~~l~~a~~~~~~~r~v~~Ss~~v-y~~~~~~~~~E~~~~~~~~~ 188 (364)
.+|.++|+++........ . +.......++..+++..+.+++|++||... ++. .....
T Consensus 81 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ii~~ss~~~~~~~------------~~~~~ 148 (180)
T smart00822 81 PLRGVIHAAGVLDDGLLANLTPERFAAVLAPKVDGAWNLHELTRDLPLDFFVLFSSVAGVLGN------------PGQAN 148 (180)
T ss_pred CeeEEEEccccCCccccccCCHHHHHHhhchHhHHHHHHHHHhccCCcceEEEEccHHHhcCC------------CCchh
Confidence 469999998754321111 1 111222345666666667789999988543 322 12357
Q ss_pred hHHHHHHHHHHHHHhhhhcCCcEEEEEeccee
Q 017914 189 LGRLRLSAEKGWLNLGRDLGISAQVFRLGGIY 220 (364)
Q Consensus 189 Y~~sK~~~E~~~~~~~~~~~~~~~ilRp~~v~ 220 (364)
|+.+|...+.+++.. ...+++++.+.||.+-
T Consensus 149 y~~sk~~~~~~~~~~-~~~~~~~~~~~~g~~~ 179 (180)
T smart00822 149 YAAANAFLDALAAHR-RARGLPATSINWGAWA 179 (180)
T ss_pred hHHHHHHHHHHHHHH-HhcCCceEEEeecccc
Confidence 999999999999654 4568899999988653
|
It uses NADPH to reduce the keto group to a hydroxy group. |
| >KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=99.23 E-value=3.7e-10 Score=97.57 Aligned_cols=193 Identities=12% Similarity=0.047 Sum_probs=115.2
Q ss_pred cCCCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhh-------hC-CceEEEccCChhhH--H-------
Q 017914 55 EWQSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELE-------QS-GFDVHLFNANETAL--M------- 116 (364)
Q Consensus 55 ~~~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~-------~~-~~~~~~~D~~~~~~--~------- 116 (364)
+...+|.|+||| +..||.+++.+|.++|..++.+.|..++.+.+. .. ++.++++|++|.+. .
T Consensus 8 e~~~~kvVvITGASsGIG~~lA~~la~~G~~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~~~~ 87 (282)
T KOG1205|consen 8 ERLAGKVVLITGASSGIGEALAYELAKRGAKLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVEWAIR 87 (282)
T ss_pred HHhCCCEEEEeCCCcHHHHHHHHHHHhCCCceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHHHHHH
Confidence 345678999999 899999999999999999888888776655541 13 48899999999764 1
Q ss_pred hhccCceeeEEEEecCCCCCCCCh-hh----hHHHH----------HHHHhhcCCccEEEEEccceeecCCCCccccCCC
Q 017914 117 ILTTLKNYTHLLVSIPPLEGTGDP-ML----KHGEL----------LRSTLMNGHLQWLGYLSSTGVYGHSGGAWVDEDY 181 (364)
Q Consensus 117 ~~~~~d~v~~~~~~~~~~~~~~~~-~~----~~~~~----------l~~a~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~ 181 (364)
.+.++|++++.|+... .....+. .. ....| ++..+++.+-.++|.+||+.-+-
T Consensus 88 ~fg~vDvLVNNAG~~~-~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvisSiaG~~----------- 155 (282)
T KOG1205|consen 88 HFGRVDVLVNNAGISL-VGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGHIVVISSIAGKM----------- 155 (282)
T ss_pred hcCCCCEEEecCcccc-ccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCeEEEEecccccc-----------
Confidence 2345666666665544 1111111 11 11122 22333444456999999975321
Q ss_pred CCCCCChhHHHHHHHHHHHHHhhhhcCCcEE----EEEecceecCCCChHHHHHHhcCcccccccccCCcccccccHHHH
Q 017914 182 PANPTTELGRLRLSAEKGWLNLGRDLGISAQ----VFRLGGIYGPGRSSVDTIIKQLPLSEGQKMRRARQYTSRIHVDDI 257 (364)
Q Consensus 182 ~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~----ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dv 257 (364)
+......|..||.+.+.+...+..+..-..+ ++-||.|-... ...-.... .+ . .+...+...+|+
T Consensus 156 ~~P~~~~Y~ASK~Al~~f~etLR~El~~~~~~i~i~V~PG~V~Te~---~~~~~~~~---~~----~-~~~~~~~~~~~~ 224 (282)
T KOG1205|consen 156 PLPFRSIYSASKHALEGFFETLRQELIPLGTIIIILVSPGPIETEF---TGKELLGE---EG----K-SQQGPFLRTEDV 224 (282)
T ss_pred CCCcccccchHHHHHHHHHHHHHHHhhccCceEEEEEecCceeecc---cchhhccc---cc----c-ccccchhhhhhh
Confidence 1112247999999999999888765532222 36677664321 11001100 00 0 223344556777
Q ss_pred HH--HHHHHccCCCC
Q 017914 258 CQ--VLSASIDKPSA 270 (364)
Q Consensus 258 a~--~~~~~l~~~~~ 270 (364)
+. .+..++..+..
T Consensus 225 ~~~~~~~~~i~~~~~ 239 (282)
T KOG1205|consen 225 ADPEAVAYAISTPPC 239 (282)
T ss_pred hhHHHHHHHHhcCcc
Confidence 55 77777776643
|
|
| >PRK08862 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.20 E-value=8.3e-10 Score=94.72 Aligned_cols=152 Identities=9% Similarity=-0.061 Sum_probs=101.4
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhh----h--CCceEEEccCChhhH--H-------hhc-
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELE----Q--SGFDVHLFNANETAL--M-------ILT- 119 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~----~--~~~~~~~~D~~~~~~--~-------~~~- 119 (364)
..+++++||| ++.||+.++++|.++|++|++..|+.++.+.+. . ..+..+.+|++|.+. . .+.
T Consensus 3 ~~~k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 82 (227)
T PRK08862 3 IKSSIILITSAGSVLGRTISCHFARLGATLILCDQDQSALKDTYEQCSALTDNVYSFQLKDFSQESIRHLFDAIEQQFNR 82 (227)
T ss_pred CCCeEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 3457999999 899999999999999999999999877654432 1 235677889998663 1 123
Q ss_pred cCceeeEEEEecCCCCCCCC-hhhhHH----HHH----------HHHhhcCC-ccEEEEEccceeecCCCCccccCCCCC
Q 017914 120 TLKNYTHLLVSIPPLEGTGD-PMLKHG----ELL----------RSTLMNGH-LQWLGYLSSTGVYGHSGGAWVDEDYPA 183 (364)
Q Consensus 120 ~~d~v~~~~~~~~~~~~~~~-~~~~~~----~~l----------~~a~~~~~-~~r~v~~Ss~~vy~~~~~~~~~E~~~~ 183 (364)
.+|.++|+++.........+ +...+. .|+ ...+...+ ..++|++||...+
T Consensus 83 ~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~-------------- 148 (227)
T PRK08862 83 APDVLVNNWTSSPLPSLFDEQPSESFIQQLSSLASTLFTYGQVAAERMRKRNKKGVIVNVISHDDH-------------- 148 (227)
T ss_pred CCCEEEECCccCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCceEEEEecCCCC--------------
Confidence 67888888864322211111 111111 111 12222322 3589999985321
Q ss_pred CCCChhHHHHHHHHHHHHHhhhh---cCCcEEEEEecceecC
Q 017914 184 NPTTELGRLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGP 222 (364)
Q Consensus 184 ~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~ 222 (364)
.....|+.+|...+.+.+.++.+ .++++..|.||.+-.+
T Consensus 149 ~~~~~Y~asKaal~~~~~~la~el~~~~Irvn~v~PG~i~t~ 190 (227)
T PRK08862 149 QDLTGVESSNALVSGFTHSWAKELTPFNIRVGGVVPSIFSAN 190 (227)
T ss_pred CCcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcCcCC
Confidence 02357999999999999888653 5899999999987665
|
|
| >PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B | Back alignment and domain information |
|---|
Probab=99.19 E-value=5.7e-10 Score=96.80 Aligned_cols=187 Identities=16% Similarity=0.103 Sum_probs=121.3
Q ss_pred ChhhHHHHHHHHhCCCEEEEEEeCchhh----hhhh-hCCceEEEccCChhhH---------Hhh-ccCceeeEEEEecC
Q 017914 68 GFVGRIFAEKIKNQGWVVSGTCTNVMKK----KELE-QSGFDVHLFNANETAL---------MIL-TTLKNYTHLLVSIP 132 (364)
Q Consensus 68 G~iG~~l~~~L~~~g~~V~~~~r~~~~~----~~l~-~~~~~~~~~D~~~~~~---------~~~-~~~d~v~~~~~~~~ 132 (364)
+.||.++++.|+++|++|++.+|+.++. ..+. +.+..++.+|+++.+. +.+ ..+|.++|+++...
T Consensus 6 ~GiG~aia~~l~~~Ga~V~~~~~~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~g~iD~lV~~a~~~~ 85 (241)
T PF13561_consen 6 SGIGRAIARALAEEGANVILTDRNEEKLADALEELAKEYGAEVIQCDLSDEESVEALFDEAVERFGGRIDILVNNAGISP 85 (241)
T ss_dssp SHHHHHHHHHHHHTTEEEEEEESSHHHHHHHHHHHHHHTTSEEEESCTTSHHHHHHHHHHHHHHHCSSESEEEEEEESCT
T ss_pred CChHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHcCCceEeecCcchHHHHHHHHHHHhhcCCCeEEEEecccccc
Confidence 8899999999999999999999998763 2222 2456789999998663 223 56799999987655
Q ss_pred C---CCCCCC-hhhhHH----H----------HHHHHhhcCCccEEEEEccceeecCCCCccccCCCCCCCCChhHHHHH
Q 017914 133 P---LEGTGD-PMLKHG----E----------LLRSTLMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANPTTELGRLRL 194 (364)
Q Consensus 133 ~---~~~~~~-~~~~~~----~----------~l~~a~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~~sK~ 194 (364)
. .....+ ....+. . .+...++.. .++|++||...... ......|+.+|.
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--gsii~iss~~~~~~-----------~~~~~~y~~sKa 152 (241)
T PF13561_consen 86 PSNVEKPLLDLSEEDWDKTFDINVFSPFLLAQAALPLMKKG--GSIINISSIAAQRP-----------MPGYSAYSASKA 152 (241)
T ss_dssp GGGTSSSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHE--EEEEEEEEGGGTSB-----------STTTHHHHHHHH
T ss_pred cccCCCChHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhC--CCcccccchhhccc-----------CccchhhHHHHH
Confidence 4 111111 111111 1 112222232 57999988643211 123358999999
Q ss_pred HHHHHHHHhhh---h-cCCcEEEEEecceecCCCChH---H----HHHHhcCcccccccccCCcccccccHHHHHHHHHH
Q 017914 195 SAEKGWLNLGR---D-LGISAQVFRLGGIYGPGRSSV---D----TIIKQLPLSEGQKMRRARQYTSRIHVDDICQVLSA 263 (364)
Q Consensus 195 ~~E~~~~~~~~---~-~~~~~~ilRp~~v~g~~~~~~---~----~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~ 263 (364)
..+.+.+.++. . .|+++..|.||.+..+....+ . .+....++. -+...+|+|++++.
T Consensus 153 al~~l~r~lA~el~~~~gIrVN~V~pG~i~t~~~~~~~~~~~~~~~~~~~~pl~------------r~~~~~evA~~v~f 220 (241)
T PF13561_consen 153 ALEGLTRSLAKELAPKKGIRVNAVSPGPIETPMTERIPGNEEFLEELKKRIPLG------------RLGTPEEVANAVLF 220 (241)
T ss_dssp HHHHHHHHHHHHHGGHGTEEEEEEEESSBSSHHHHHHHTHHHHHHHHHHHSTTS------------SHBEHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccccCeeeeeecccceeccchhccccccchhhhhhhhhccC------------CCcCHHHHHHHHHH
Confidence 99999888763 3 689999999998875431111 1 111112111 12568999999999
Q ss_pred HccCCC---CCceEEEeCC
Q 017914 264 SIDKPS---AWNVYNVVDD 279 (364)
Q Consensus 264 ~l~~~~---~g~~~~i~~~ 279 (364)
++.... .|+++.+.+|
T Consensus 221 L~s~~a~~itG~~i~vDGG 239 (241)
T PF13561_consen 221 LASDAASYITGQVIPVDGG 239 (241)
T ss_dssp HHSGGGTTGTSEEEEESTT
T ss_pred HhCccccCccCCeEEECCC
Confidence 998652 3888887765
|
... |
| >PRK08303 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.19 E-value=5.5e-10 Score=100.16 Aligned_cols=198 Identities=10% Similarity=-0.005 Sum_probs=114.9
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCch----------hhhh----hhh--CCceEEEccCChhhH--Hh
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVM----------KKKE----LEQ--SGFDVHLFNANETAL--MI 117 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~----------~~~~----l~~--~~~~~~~~D~~~~~~--~~ 117 (364)
..++++|||| ++.||.+++++|++.|++|++++|+.. .... +.. ..+.++.+|++|.+. ..
T Consensus 6 l~~k~~lITGgs~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~ 85 (305)
T PRK08303 6 LRGKVALVAGATRGAGRGIAVELGAAGATVYVTGRSTRARRSEYDRPETIEETAELVTAAGGRGIAVQVDHLVPEQVRAL 85 (305)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecccccccccccccchHHHHHHHHHhcCCceEEEEcCCCCHHHHHHH
Confidence 3468999998 899999999999999999999999742 2111 111 235678999999663 11
Q ss_pred -------hccCceeeEEE-EecC--C-CCCCCC-hhh----hHHHHH----------HHHhhcCCccEEEEEcccee-ec
Q 017914 118 -------LTTLKNYTHLL-VSIP--P-LEGTGD-PML----KHGELL----------RSTLMNGHLQWLGYLSSTGV-YG 170 (364)
Q Consensus 118 -------~~~~d~v~~~~-~~~~--~-~~~~~~-~~~----~~~~~l----------~~a~~~~~~~r~v~~Ss~~v-y~ 170 (364)
+..+|.++|++ +... . .....+ ... ....|+ +..+...+-.++|++||... +.
T Consensus 86 ~~~~~~~~g~iDilVnnA~g~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~lp~m~~~~~g~IV~isS~~~~~~ 165 (305)
T PRK08303 86 VERIDREQGRLDILVNDIWGGEKLFEWGKPVWEHSLDKGLRMLRLAIDTHLITSHFALPLLIRRPGGLVVEITDGTAEYN 165 (305)
T ss_pred HHHHHHHcCCccEEEECCcccccccccCCchhhcCHHHHHHHHHHhhHHHHHHHHHHHHHhhhCCCcEEEEECCcccccc
Confidence 23578888887 4211 0 011111 011 111222 22222333458999988532 21
Q ss_pred CCCCccccCCCCCCCCChhHHHHHHHHHHHHHhhhh---cCCcEEEEEecceecCCCChHHHHHH--hcCcccccccccC
Q 017914 171 HSGGAWVDEDYPANPTTELGRLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRSSVDTIIK--QLPLSEGQKMRRA 245 (364)
Q Consensus 171 ~~~~~~~~E~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~--~~~~~~~~~~~~~ 245 (364)
.. +......|+.+|...+.+.+.++.+ .|+++..|.||.+-.+. ...... ...+... ....+
T Consensus 166 ~~---------~~~~~~~Y~asKaal~~lt~~La~el~~~gIrVn~v~PG~v~T~~---~~~~~~~~~~~~~~~-~~~~p 232 (305)
T PRK08303 166 AT---------HYRLSVFYDLAKTSVNRLAFSLAHELAPHGATAVALTPGWLRSEM---MLDAFGVTEENWRDA-LAKEP 232 (305)
T ss_pred Cc---------CCCCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEecCCccccHH---HHHhhccCccchhhh-hcccc
Confidence 10 0112346999999999998887654 47999999999875431 111000 0000000 00000
Q ss_pred CcccccccHHHHHHHHHHHccCC
Q 017914 246 RQYTSRIHVDDICQVLSASIDKP 268 (364)
Q Consensus 246 ~~~~~~i~v~Dva~~~~~~l~~~ 268 (364)
...-+...+|+|++++.++...
T Consensus 233 -~~~~~~~peevA~~v~fL~s~~ 254 (305)
T PRK08303 233 -HFAISETPRYVGRAVAALAADP 254 (305)
T ss_pred -ccccCCCHHHHHHHHHHHHcCc
Confidence 0111246899999999998765
|
|
| >PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.16 E-value=4.1e-10 Score=97.67 Aligned_cols=192 Identities=10% Similarity=-0.027 Sum_probs=115.4
Q ss_pred HHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCChhhH--Hhh----ccCceeeEEEEecCCCCCCCChhhhHHH-
Q 017914 74 FAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETAL--MIL----TTLKNYTHLLVSIPPLEGTGDPMLKHGE- 146 (364)
Q Consensus 74 l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~--~~~----~~~d~v~~~~~~~~~~~~~~~~~~~~~~- 146 (364)
+++.|+++|++|++++|+.++.. ...++.+|++|.+. ..+ ..+|+++|+++.... . +.......
T Consensus 1 ~a~~l~~~G~~Vv~~~r~~~~~~-----~~~~~~~Dl~~~~~v~~~~~~~~~~iD~li~nAG~~~~-~---~~~~~~~vN 71 (241)
T PRK12428 1 TARLLRFLGARVIGVDRREPGMT-----LDGFIQADLGDPASIDAAVAALPGRIDALFNIAGVPGT-A---PVELVARVN 71 (241)
T ss_pred ChHHHHhCCCEEEEEeCCcchhh-----hhHhhcccCCCHHHHHHHHHHhcCCCeEEEECCCCCCC-C---CHHHhhhhc
Confidence 47889999999999999866532 23567899998664 333 358999999975421 1 11111222
Q ss_pred -----HHHHHhhc--CCccEEEEEccceeecCCCCccccCC----------------CCCCCCChhHHHHHHHHHHHHHh
Q 017914 147 -----LLRSTLMN--GHLQWLGYLSSTGVYGHSGGAWVDED----------------YPANPTTELGRLRLSAEKGWLNL 203 (364)
Q Consensus 147 -----~l~~a~~~--~~~~r~v~~Ss~~vy~~~~~~~~~E~----------------~~~~~~~~Y~~sK~~~E~~~~~~ 203 (364)
++..++.. ....++|++||...|+.....+..|. .+......|+.+|...+.+.+.+
T Consensus 72 ~~~~~~l~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l 151 (241)
T PRK12428 72 FLGLRHLTEALLPRMAPGGAIVNVASLAGAEWPQRLELHKALAATASFDEGAAWLAAHPVALATGYQLSKEALILWTMRQ 151 (241)
T ss_pred hHHHHHHHHHHHHhccCCcEEEEeCcHHhhccccchHHHHhhhccchHHHHHHhhhccCCCcccHHHHHHHHHHHHHHHH
Confidence 23333221 11258999999887753221111111 23345578999999999998877
Q ss_pred h----hhcCCcEEEEEecceecCCCChHHHHHHhcCcccccccccCCcccccccHHHHHHHHHHHccCCC---CCceEEE
Q 017914 204 G----RDLGISAQVFRLGGIYGPGRSSVDTIIKQLPLSEGQKMRRARQYTSRIHVDDICQVLSASIDKPS---AWNVYNV 276 (364)
Q Consensus 204 ~----~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~---~g~~~~i 276 (364)
+ ...|+++++|+||.+.++................. . .....+...+|+|++++.++.... .|+...+
T Consensus 152 a~~e~~~~girvn~v~PG~v~T~~~~~~~~~~~~~~~~~~---~--~~~~~~~~pe~va~~~~~l~s~~~~~~~G~~i~v 226 (241)
T PRK12428 152 AQPWFGARGIRVNCVAPGPVFTPILGDFRSMLGQERVDSD---A--KRMGRPATADEQAAVLVFLCSDAARWINGVNLPV 226 (241)
T ss_pred HHHhhhccCeEEEEeecCCccCcccccchhhhhhHhhhhc---c--cccCCCCCHHHHHHHHHHHcChhhcCccCcEEEe
Confidence 7 34589999999999987642211100000000000 0 001124678999999999886542 3666766
Q ss_pred eCC
Q 017914 277 VDD 279 (364)
Q Consensus 277 ~~~ 279 (364)
.+|
T Consensus 227 dgg 229 (241)
T PRK12428 227 DGG 229 (241)
T ss_pred cCc
Confidence 555
|
|
| >KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.16 E-value=3.2e-09 Score=92.90 Aligned_cols=209 Identities=11% Similarity=-0.002 Sum_probs=132.2
Q ss_pred CCCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhh---------CCceEEEccCChhhH---------H
Q 017914 56 WQSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQ---------SGFDVHLFNANETAL---------M 116 (364)
Q Consensus 56 ~~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~---------~~~~~~~~D~~~~~~---------~ 116 (364)
...+|.+|||| +..||++++++|.+.|.+|+...|+.+....... ..+..+.+|+++.+. .
T Consensus 5 ~l~gkvalVTG~s~GIG~aia~~la~~Ga~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~~~~ 84 (270)
T KOG0725|consen 5 RLAGKVALVTGGSSGIGKAIALLLAKAGAKVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEFAVE 84 (270)
T ss_pred cCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHHHHH
Confidence 35678999998 8889999999999999999999998876544321 346788999997542 1
Q ss_pred h-hccCceeeEEEEecCCCCC-CCChhh----hHHHHHH-----------HHhhcCCccEEEEEccceeecCCCCccccC
Q 017914 117 I-LTTLKNYTHLLVSIPPLEG-TGDPML----KHGELLR-----------STLMNGHLQWLGYLSSTGVYGHSGGAWVDE 179 (364)
Q Consensus 117 ~-~~~~d~v~~~~~~~~~~~~-~~~~~~----~~~~~l~-----------~a~~~~~~~r~v~~Ss~~vy~~~~~~~~~E 179 (364)
. +..+|.+++.++....... .+.... ....|+. ..+++.+-..++++||..-+.....
T Consensus 85 ~~~GkidiLvnnag~~~~~~~~~~~s~e~~d~~~~~Nl~G~~~~~~~~a~~~~~~~~gg~I~~~ss~~~~~~~~~----- 159 (270)
T KOG0725|consen 85 KFFGKIDILVNNAGALGLTGSILDLSEEVFDKIMATNLRGSAFCLKQAARPMLKKSKGGSIVNISSVAGVGPGPG----- 159 (270)
T ss_pred HhCCCCCEEEEcCCcCCCCCChhhCCHHHHHHHHhhhchhHHHHHHHHHHHHHHhcCCceEEEEeccccccCCCC-----
Confidence 2 2457888888877654421 111111 1122333 1122444567888888754322111
Q ss_pred CCCCCCCChhHHHHHHHHHHHHHhhh---hcCCcEEEEEecceecCCCC-h-----HHHHHHhcCcccccccccCCcccc
Q 017914 180 DYPANPTTELGRLRLSAEKGWLNLGR---DLGISAQVFRLGGIYGPGRS-S-----VDTIIKQLPLSEGQKMRRARQYTS 250 (364)
Q Consensus 180 ~~~~~~~~~Y~~sK~~~E~~~~~~~~---~~~~~~~ilRp~~v~g~~~~-~-----~~~~~~~~~~~~~~~~~~~~~~~~ 250 (364)
+...|+.+|.+.+++.+..+. +.|+++..|-||.+..+... . ...+..........+ .-.
T Consensus 160 -----~~~~Y~~sK~al~~ltr~lA~El~~~gIRvN~v~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~p------~gr 228 (270)
T KOG0725|consen 160 -----SGVAYGVSKAALLQLTRSLAKELAKHGIRVNSVSPGLVKTSLRAAGLDDGEMEEFKEATDSKGAVP------LGR 228 (270)
T ss_pred -----CcccchhHHHHHHHHHHHHHHHHhhcCcEEEEeecCcEeCCccccccccchhhHHhhhhccccccc------cCC
Confidence 115799999999999999874 45899999999988876411 0 111111100000001 112
Q ss_pred cccHHHHHHHHHHHccCCC---CCceEEEeCCC
Q 017914 251 RIHVDDICQVLSASIDKPS---AWNVYNVVDDD 280 (364)
Q Consensus 251 ~i~v~Dva~~~~~~l~~~~---~g~~~~i~~~~ 280 (364)
+...+|+|.++..++.... .|+.+.+.+|.
T Consensus 229 ~g~~~eva~~~~fla~~~asyitG~~i~vdgG~ 261 (270)
T KOG0725|consen 229 VGTPEEVAEAAAFLASDDASYITGQTIIVDGGF 261 (270)
T ss_pred ccCHHHHHHhHHhhcCcccccccCCEEEEeCCE
Confidence 2557999999988887642 36777666654
|
|
| >PLN00015 protochlorophyllide reductase | Back alignment and domain information |
|---|
Probab=99.15 E-value=6.3e-10 Score=100.15 Aligned_cols=199 Identities=15% Similarity=0.170 Sum_probs=115.3
Q ss_pred EEEc-CChhhHHHHHHHHhCC-CEEEEEEeCchhhhhhh------hCCceEEEccCChhhH--Hh---h----ccCceee
Q 017914 63 LILG-MGFVGRIFAEKIKNQG-WVVSGTCTNVMKKKELE------QSGFDVHLFNANETAL--MI---L----TTLKNYT 125 (364)
Q Consensus 63 lVtG-tG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~l~------~~~~~~~~~D~~~~~~--~~---~----~~~d~v~ 125 (364)
|||| ++.||.+++++|+++| ++|++.+|+.++...+. ...+.++.+|++|.+. .. + ..+|.++
T Consensus 1 lITGas~GIG~aia~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~lI 80 (308)
T PLN00015 1 IITGASSGLGLATAKALAETGKWHVVMACRDFLKAERAAKSAGMPKDSYTVMHLDLASLDSVRQFVDNFRRSGRPLDVLV 80 (308)
T ss_pred CEeCCCChHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEecCCCHHHHHHHHHHHHhcCCCCCEEE
Confidence 5899 9999999999999999 99999999876544321 1246678899999663 11 1 3578999
Q ss_pred EEEEecCCCCCC-----CChhhhHHHHH----------HHHhhcCC--ccEEEEEccceeecCCC-C--c----------
Q 017914 126 HLLVSIPPLEGT-----GDPMLKHGELL----------RSTLMNGH--LQWLGYLSSTGVYGHSG-G--A---------- 175 (364)
Q Consensus 126 ~~~~~~~~~~~~-----~~~~~~~~~~l----------~~a~~~~~--~~r~v~~Ss~~vy~~~~-~--~---------- 175 (364)
|+++........ .+.......|+ +..+...+ ..++|++||...+-... . .
T Consensus 81 nnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~~~~~~~~ 160 (308)
T PLN00015 81 CNAAVYLPTAKEPTFTADGFELSVGTNHLGHFLLSRLLLDDLKKSDYPSKRLIIVGSITGNTNTLAGNVPPKANLGDLRG 160 (308)
T ss_pred ECCCcCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCCCEEEEEeccccccccccccCCCccchhhhhh
Confidence 988754321111 11111222333 33333333 46899999975431100 0 0
Q ss_pred ------------cccCCCCCCCCChhHHHHHHHHHHHHHhhhh----cCCcEEEEEecceecCC--CChHHHHHHhcCcc
Q 017914 176 ------------WVDEDYPANPTTELGRLRLSAEKGWLNLGRD----LGISAQVFRLGGIYGPG--RSSVDTIIKQLPLS 237 (364)
Q Consensus 176 ------------~~~E~~~~~~~~~Y~~sK~~~E~~~~~~~~~----~~~~~~ilRp~~v~g~~--~~~~~~~~~~~~~~ 237 (364)
++++ ....+...|+.||.+.+.+.+.++++ .|+.++.++||.+.... ..............
T Consensus 161 ~~~~~~~~~~~~~~~~-~~~~~~~aY~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~t~~~~~~~~~~~~~~~~~ 239 (308)
T PLN00015 161 LAGGLNGLNSSAMIDG-GEFDGAKAYKDSKVCNMLTMQEFHRRYHEETGITFASLYPGCIATTGLFREHIPLFRLLFPPF 239 (308)
T ss_pred hhcccCCccchhhccc-cCCcHHHHHhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccCccccccccHHHHHHHHHH
Confidence 0011 11234567999999977776666543 47999999999985321 11110000000000
Q ss_pred cccccccCCcccccccHHHHHHHHHHHccCC
Q 017914 238 EGQKMRRARQYTSRIHVDDICQVLSASIDKP 268 (364)
Q Consensus 238 ~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~ 268 (364)
. ... ...+...++.|+.++.++...
T Consensus 240 ~-~~~-----~~~~~~pe~~a~~~~~l~~~~ 264 (308)
T PLN00015 240 Q-KYI-----TKGYVSEEEAGKRLAQVVSDP 264 (308)
T ss_pred H-HHH-----hcccccHHHhhhhhhhhcccc
Confidence 0 000 001356899999998887754
|
|
| >KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=99.14 E-value=1.3e-09 Score=96.89 Aligned_cols=168 Identities=17% Similarity=0.039 Sum_probs=114.3
Q ss_pred CCCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhh--------hCCceEEEccCChhhH-----Hh----
Q 017914 56 WQSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELE--------QSGFDVHLFNANETAL-----MI---- 117 (364)
Q Consensus 56 ~~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~--------~~~~~~~~~D~~~~~~-----~~---- 117 (364)
...+++++||| +..||..+++.|..+|..|+...|+.+...... ...+.++.+|+++.+. ..
T Consensus 32 ~~~~~~~vVTGansGIG~eta~~La~~Ga~Vv~~~R~~~~~~~~~~~i~~~~~~~~i~~~~lDLssl~SV~~fa~~~~~~ 111 (314)
T KOG1208|consen 32 DLSGKVALVTGATSGIGFETARELALRGAHVVLACRNEERGEEAKEQIQKGKANQKIRVIQLDLSSLKSVRKFAEEFKKK 111 (314)
T ss_pred cCCCcEEEEECCCCchHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCHHHHHHHHHHHHhc
Confidence 34568999999 899999999999999999999999975544321 2456789999999764 11
Q ss_pred hccCceeeEEEEecCCCCCC-CC-hhh----------hHHHHHHHHhhcCCccEEEEEcccee-ecCCCCccccCCCC-C
Q 017914 118 LTTLKNYTHLLVSIPPLEGT-GD-PML----------KHGELLRSTLMNGHLQWLGYLSSTGV-YGHSGGAWVDEDYP-A 183 (364)
Q Consensus 118 ~~~~d~v~~~~~~~~~~~~~-~~-~~~----------~~~~~l~~a~~~~~~~r~v~~Ss~~v-y~~~~~~~~~E~~~-~ 183 (364)
....|+.++.|+.+...... .| .+. .....++..++.....|+|++||... ..........|... .
T Consensus 112 ~~~ldvLInNAGV~~~~~~~t~DG~E~~~~tN~lg~flLt~lLlp~lk~s~~~RIV~vsS~~~~~~~~~~~l~~~~~~~~ 191 (314)
T KOG1208|consen 112 EGPLDVLINNAGVMAPPFSLTKDGLELTFATNYLGHFLLTELLLPLLKRSAPSRIVNVSSILGGGKIDLKDLSGEKAKLY 191 (314)
T ss_pred CCCccEEEeCcccccCCcccCccchhheehhhhHHHHHHHHHHHHHHhhCCCCCEEEEcCccccCccchhhccchhccCc
Confidence 24568888877776554421 11 111 11245555566554479999999764 11111222223332 2
Q ss_pred CCCChhHHHHHHHHHHHHHhhhhc--CCcEEEEEecceecCC
Q 017914 184 NPTTELGRLRLSAEKGWLNLGRDL--GISAQVFRLGGIYGPG 223 (364)
Q Consensus 184 ~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~ilRp~~v~g~~ 223 (364)
.....|+.||.+...+..+++++. |+.+..+.||.+....
T Consensus 192 ~~~~~Y~~SKla~~l~~~eL~k~l~~~V~~~~~hPG~v~t~~ 233 (314)
T KOG1208|consen 192 SSDAAYALSKLANVLLANELAKRLKKGVTTYSVHPGVVKTTG 233 (314)
T ss_pred cchhHHHHhHHHHHHHHHHHHHHhhcCceEEEECCCcccccc
Confidence 333359999999999999888665 6999999999887763
|
|
| >KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=99.11 E-value=1.1e-08 Score=87.83 Aligned_cols=189 Identities=10% Similarity=-0.009 Sum_probs=124.9
Q ss_pred CCCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhh----hh-CCceEEEccCChhhH---------Hhhcc
Q 017914 56 WQSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKEL----EQ-SGFDVHLFNANETAL---------MILTT 120 (364)
Q Consensus 56 ~~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l----~~-~~~~~~~~D~~~~~~---------~~~~~ 120 (364)
+..+..||||| ++.+|+.++.+++++|..+.+.+.+.+...+. .. ..+..+.+|+++.+. +....
T Consensus 35 ~v~g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~~~g~~~~y~cdis~~eei~~~a~~Vk~e~G~ 114 (300)
T KOG1201|consen 35 SVSGEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIRKIGEAKAYTCDISDREEIYRLAKKVKKEVGD 114 (300)
T ss_pred hccCCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHHHHhcCceeEEEecCCCHHHHHHHHHHHHHhcCC
Confidence 45578999998 78899999999999999999999887654432 11 247889999999663 22246
Q ss_pred CceeeEEEEecCCCCCCCChhh----hHHHHHHHH----------hhcCCccEEEEEccce-eecCCCCccccCCCCCCC
Q 017914 121 LKNYTHLLVSIPPLEGTGDPML----KHGELLRST----------LMNGHLQWLGYLSSTG-VYGHSGGAWVDEDYPANP 185 (364)
Q Consensus 121 ~d~v~~~~~~~~~~~~~~~~~~----~~~~~l~~a----------~~~~~~~r~v~~Ss~~-vy~~~~~~~~~E~~~~~~ 185 (364)
++++++.|+.+....-.+-... ....|+... +.+..-.++|-++|+. ..+.. .
T Consensus 115 V~ILVNNAGI~~~~~ll~~~d~ei~k~~~vN~~~~f~t~kaFLP~M~~~~~GHIV~IaS~aG~~g~~------------g 182 (300)
T KOG1201|consen 115 VDILVNNAGIVTGKKLLDCSDEEIQKTFDVNTIAHFWTTKAFLPKMLENNNGHIVTIASVAGLFGPA------------G 182 (300)
T ss_pred ceEEEeccccccCCCccCCCHHHHHHHHHHhhHHHHHHHHHHhHHHHhcCCceEEEehhhhcccCCc------------c
Confidence 7888888887665443221111 222344433 3354556999997754 32221 2
Q ss_pred CChhHHHHHHHHHHHHHhh------hhcCCcEEEEEecceecCCCChHHHHHHhcCcccccccccCCcccccccHHHHHH
Q 017914 186 TTELGRLRLSAEKGWLNLG------RDLGISAQVFRLGGIYGPGRSSVDTIIKQLPLSEGQKMRRARQYTSRIHVDDICQ 259 (364)
Q Consensus 186 ~~~Y~~sK~~~E~~~~~~~------~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~ 259 (364)
..+|+.||.++.-+.+.+. ...|++.+.+-|+.+-. +. ... .. .-....+.+..+.+|+
T Consensus 183 l~~YcaSK~a~vGfhesL~~EL~~~~~~~IktTlv~P~~i~T---gm----f~~-~~-------~~~~l~P~L~p~~va~ 247 (300)
T KOG1201|consen 183 LADYCASKFAAVGFHESLSMELRALGKDGIKTTLVCPYFINT---GM----FDG-AT-------PFPTLAPLLEPEYVAK 247 (300)
T ss_pred chhhhhhHHHHHHHHHHHHHHHHhcCCCCeeEEEEeeeeccc---cc----cCC-CC-------CCccccCCCCHHHHHH
Confidence 3579999999977666553 22368899998876531 11 111 11 1123456688999999
Q ss_pred HHHHHccCCCCC
Q 017914 260 VLSASIDKPSAW 271 (364)
Q Consensus 260 ~~~~~l~~~~~g 271 (364)
.++.++.....+
T Consensus 248 ~Iv~ai~~n~~~ 259 (300)
T KOG1201|consen 248 RIVEAILTNQAG 259 (300)
T ss_pred HHHHHHHcCCcc
Confidence 999999877553
|
|
| >PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases | Back alignment and domain information |
|---|
Probab=99.06 E-value=2.1e-09 Score=87.56 Aligned_cols=135 Identities=15% Similarity=0.069 Sum_probs=88.7
Q ss_pred CeEEEEc-CChhhHHHHHHHHhCC-CEEEEEEeC--chhhhhh----h--hCCceEEEccCChhhH--H-------hhcc
Q 017914 60 NRMLILG-MGFVGRIFAEKIKNQG-WVVSGTCTN--VMKKKEL----E--QSGFDVHLFNANETAL--M-------ILTT 120 (364)
Q Consensus 60 ~~vlVtG-tG~iG~~l~~~L~~~g-~~V~~~~r~--~~~~~~l----~--~~~~~~~~~D~~~~~~--~-------~~~~ 120 (364)
|+||||| +|.||+.++++|+++| +.|+++.|+ .+....+ . ..++.++.+|+++.+. . ....
T Consensus 1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 80 (167)
T PF00106_consen 1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLSDPESIRALIEEVIKRFGP 80 (167)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHHHHHHHSS
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeeccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 4799999 9999999999999995 578888888 3333332 2 2467889999999764 1 1246
Q ss_pred CceeeEEEEecCCCCCCCC-hhhhH----HH------HHHHHhhcCCccEEEEEccceeecCCCCccccCCCCCCCCChh
Q 017914 121 LKNYTHLLVSIPPLEGTGD-PMLKH----GE------LLRSTLMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANPTTEL 189 (364)
Q Consensus 121 ~d~v~~~~~~~~~~~~~~~-~~~~~----~~------~l~~a~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y 189 (364)
+|.++|+++.... ....+ ..... .. ++..++...+-.++|++||....-. ......|
T Consensus 81 ld~li~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~-----------~~~~~~Y 148 (167)
T PF00106_consen 81 LDILINNAGIFSD-GSLDDLSEEELERVFRVNLFGPFLLAKALLPQGGGKIVNISSIAGVRG-----------SPGMSAY 148 (167)
T ss_dssp ESEEEEECSCTTS-BSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHTTEEEEEEEEGGGTSS-----------STTBHHH
T ss_pred ccccccccccccc-cccccccchhhhhccccccceeeeeeehheeccccceEEecchhhccC-----------CCCChhH
Confidence 7899999877652 22221 11111 11 2222222234568999998653321 1233689
Q ss_pred HHHHHHHHHHHHHhhhh
Q 017914 190 GRLRLSAEKGWLNLGRD 206 (364)
Q Consensus 190 ~~sK~~~E~~~~~~~~~ 206 (364)
+.+|...+.+++.++++
T Consensus 149 ~askaal~~~~~~la~e 165 (167)
T PF00106_consen 149 SASKAALRGLTQSLAAE 165 (167)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHh
Confidence 99999999999887654
|
As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A .... |
| >KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=99.05 E-value=7.6e-09 Score=83.70 Aligned_cols=151 Identities=13% Similarity=0.113 Sum_probs=98.4
Q ss_pred CCCeEEEEc-C-ChhhHHHHHHHHhCCCEEEEEEeCchhhhhhh-hCCceEEEccCChhhH--H----hhc----cCcee
Q 017914 58 SPNRMLILG-M-GFVGRIFAEKIKNQGWVVSGTCTNVMKKKELE-QSGFDVHLFNANETAL--M----ILT----TLKNY 124 (364)
Q Consensus 58 ~~~~vlVtG-t-G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~-~~~~~~~~~D~~~~~~--~----~~~----~~d~v 124 (364)
..+.||||| + |.||.+|++++.++|+.|++..|+.+.-..|. +.++..+..|+++++. . ..+ .+|..
T Consensus 6 ~~k~VlItgcs~GGIG~ala~ef~~~G~~V~AtaR~~e~M~~L~~~~gl~~~kLDV~~~~~V~~v~~evr~~~~Gkld~L 85 (289)
T KOG1209|consen 6 QPKKVLITGCSSGGIGYALAKEFARNGYLVYATARRLEPMAQLAIQFGLKPYKLDVSKPEEVVTVSGEVRANPDGKLDLL 85 (289)
T ss_pred CCCeEEEeecCCcchhHHHHHHHHhCCeEEEEEccccchHhhHHHhhCCeeEEeccCChHHHHHHHHHHhhCCCCceEEE
Confidence 347999997 4 99999999999999999999999988888776 5789999999999774 1 122 24555
Q ss_pred eEEEEecCCCCCCCChhhh----HHH------HHHHHh----hcCCccEEEEEccceeecCCCCccccCCCCCCCCChhH
Q 017914 125 THLLVSIPPLEGTGDPMLK----HGE------LLRSTL----MNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANPTTELG 190 (364)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~~----~~~------~l~~a~----~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~ 190 (364)
++.|+..-.....+.+... +.. ++-.++ .+. ...+|++.|..+|-+-. -.+.|.
T Consensus 86 ~NNAG~~C~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h~lika-KGtIVnvgSl~~~vpfp-----------f~~iYs 153 (289)
T KOG1209|consen 86 YNNAGQSCTFPALDATIAAVEQCFKVNVFGHIRMCRALSHFLIKA-KGTIVNVGSLAGVVPFP-----------FGSIYS 153 (289)
T ss_pred EcCCCCCcccccccCCHHHHHhhhccceeeeehHHHHHHHHHHHc-cceEEEecceeEEeccc-----------hhhhhh
Confidence 5555432111111111111 111 122221 122 23799999987763221 236799
Q ss_pred HHHHHHHHHHHHhh---hhcCCcEEEEEeccee
Q 017914 191 RLRLSAEKGWLNLG---RDLGISAQVFRLGGIY 220 (364)
Q Consensus 191 ~sK~~~E~~~~~~~---~~~~~~~~ilRp~~v~ 220 (364)
.||.+...+.+.+. +-+|++++.+-+|.|-
T Consensus 154 AsKAAihay~~tLrlEl~PFgv~Vin~itGGv~ 186 (289)
T KOG1209|consen 154 ASKAAIHAYARTLRLELKPFGVRVINAITGGVA 186 (289)
T ss_pred HHHHHHHHhhhhcEEeeeccccEEEEeccccee
Confidence 99998887776553 3357777777777654
|
|
| >PLN02730 enoyl-[acyl-carrier-protein] reductase | Back alignment and domain information |
|---|
Probab=99.04 E-value=2.4e-08 Score=88.98 Aligned_cols=201 Identities=12% Similarity=0.033 Sum_probs=117.6
Q ss_pred CCCCeEEEEcC---ChhhHHHHHHHHhCCCEEEEEEeCchhhhhhh---------------hC----CceEEEccC--Ch
Q 017914 57 QSPNRMLILGM---GFVGRIFAEKIKNQGWVVSGTCTNVMKKKELE---------------QS----GFDVHLFNA--NE 112 (364)
Q Consensus 57 ~~~~~vlVtGt---G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~---------------~~----~~~~~~~D~--~~ 112 (364)
..+|++||||+ ..||.++++.|.+.|.+|++ .|..+..+.+. .. ....+.+|+ ++
T Consensus 7 l~gk~alITGa~~s~GIG~a~A~~la~~Ga~Vv~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~ 85 (303)
T PLN02730 7 LRGKRAFIAGVADDNGYGWAIAKALAAAGAEILV-GTWVPALNIFETSLRRGKFDESRKLPDGSLMEITKVYPLDAVFDT 85 (303)
T ss_pred CCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEE-EeCcchhhHHHHhhhccccchhhhcccccccCcCeeeecceecCc
Confidence 66789999984 88999999999999999988 55433221111 01 135677888 22
Q ss_pred hh-------------------H----H----hhccCceeeEEEEecCC-CCCCC-----ChhhhHHHHHHHH--------
Q 017914 113 TA-------------------L----M----ILTTLKNYTHLLVSIPP-LEGTG-----DPMLKHGELLRST-------- 151 (364)
Q Consensus 113 ~~-------------------~----~----~~~~~d~v~~~~~~~~~-~~~~~-----~~~~~~~~~l~~a-------- 151 (364)
.+ . . .+..+|+++|+++.... ..... +.......|+...
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~v~~l~~~i~~~~G~iDiLVnNAG~~~~~~~~~~~~~~e~~~~~~~vN~~~~~~l~~~~~ 165 (303)
T PLN02730 86 PEDVPEDVKTNKRYAGSSNWTVQEVAESVKADFGSIDILVHSLANGPEVTKPLLETSRKGYLAAISASSYSFVSLLQHFG 165 (303)
T ss_pred cccCchhhhcccccccCCHHHHHHHHHHHHHHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHH
Confidence 11 1 1 12457999999853221 11111 1111222233222
Q ss_pred --hhcCCccEEEEEccceeecCCCCccccCCCCCCCC-ChhHHHHHHHHHHHHHhhhh----cCCcEEEEEecceecCCC
Q 017914 152 --LMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANPT-TELGRLRLSAEKGWLNLGRD----LGISAQVFRLGGIYGPGR 224 (364)
Q Consensus 152 --~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~-~~Y~~sK~~~E~~~~~~~~~----~~~~~~ilRp~~v~g~~~ 224 (364)
+++. .++|++||....... ... ..|+.+|...+.+.+.++.+ .|++++.|-||.+-.+..
T Consensus 166 p~m~~~--G~II~isS~a~~~~~-----------p~~~~~Y~asKaAl~~l~~~la~El~~~~gIrVn~V~PG~v~T~~~ 232 (303)
T PLN02730 166 PIMNPG--GASISLTYIASERII-----------PGYGGGMSSAKAALESDTRVLAFEAGRKYKIRVNTISAGPLGSRAA 232 (303)
T ss_pred HHHhcC--CEEEEEechhhcCCC-----------CCCchhhHHHHHHHHHHHHHHHHHhCcCCCeEEEEEeeCCccCchh
Confidence 2233 589999986432110 012 36999999999999988753 478999999998865431
Q ss_pred ChH---HHHHHhcCcccccccccCCcccccccHHHHHHHHHHHccCCC---CCceEEEeCC
Q 017914 225 SSV---DTIIKQLPLSEGQKMRRARQYTSRIHVDDICQVLSASIDKPS---AWNVYNVVDD 279 (364)
Q Consensus 225 ~~~---~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~---~g~~~~i~~~ 279 (364)
..+ ...... ..... + ...+...+|+|.+++.++.... .|+.+.+.++
T Consensus 233 ~~~~~~~~~~~~--~~~~~----p--l~r~~~peevA~~~~fLaS~~a~~itG~~l~vdGG 285 (303)
T PLN02730 233 KAIGFIDDMIEY--SYANA----P--LQKELTADEVGNAAAFLASPLASAITGATIYVDNG 285 (303)
T ss_pred hcccccHHHHHH--HHhcC----C--CCCCcCHHHHHHHHHHHhCccccCccCCEEEECCC
Confidence 100 011000 00000 0 0123568999999999997542 3777777655
|
|
| >COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.00 E-value=8.8e-09 Score=82.99 Aligned_cols=155 Identities=12% Similarity=0.020 Sum_probs=107.0
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhh--CCceEEEccCChhhH---------HhhccCcee
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQ--SGFDVHLFNANETAL---------MILTTLKNY 124 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~--~~~~~~~~D~~~~~~---------~~~~~~d~v 124 (364)
..+.+||||| +..||..|++++.+.|-+|+...|+..+..+... +.+....+|+.|.+. +....++++
T Consensus 3 ~tgnTiLITGG~sGIGl~lak~f~elgN~VIi~gR~e~~L~e~~~~~p~~~t~v~Dv~d~~~~~~lvewLkk~~P~lNvl 82 (245)
T COG3967 3 TTGNTILITGGASGIGLALAKRFLELGNTVIICGRNEERLAEAKAENPEIHTEVCDVADRDSRRELVEWLKKEYPNLNVL 82 (245)
T ss_pred ccCcEEEEeCCcchhhHHHHHHHHHhCCEEEEecCcHHHHHHHHhcCcchheeeecccchhhHHHHHHHHHhhCCchhee
Confidence 4567999997 7789999999999999999999999888766543 667888899999763 222457999
Q ss_pred eEEEEecCCCCCC------CChhhhHHHHHHHHh----------hcCCccEEEEEccceeecCCCCccccCCCCCCCCCh
Q 017914 125 THLLVSIPPLEGT------GDPMLKHGELLRSTL----------MNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANPTTE 188 (364)
Q Consensus 125 ~~~~~~~~~~~~~------~~~~~~~~~~l~~a~----------~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~ 188 (364)
+++|+......-. .+...+...|++... .+..-..+|.+||.-.+-+.... -.
T Consensus 83 iNNAGIqr~~dlt~~e~~~~~~~~eI~~Nl~API~Lt~~~lphl~~q~~a~IInVSSGLafvPm~~~-----------Pv 151 (245)
T COG3967 83 INNAGIQRNEDLTGAEDLLDDAEQEIATNLLAPIRLTALLLPHLLRQPEATIINVSSGLAFVPMAST-----------PV 151 (245)
T ss_pred eecccccchhhccCCcchhhHHHHHHHHhhhhHHHHHHHHHHHHHhCCCceEEEeccccccCccccc-----------cc
Confidence 9999875543211 112223333444333 24445579999986555332222 35
Q ss_pred hHHHHHHHHHHHHHhh---hhcCCcEEEEEecceecC
Q 017914 189 LGRLRLSAEKGWLNLG---RDLGISAQVFRLGGIYGP 222 (364)
Q Consensus 189 Y~~sK~~~E~~~~~~~---~~~~~~~~ilRp~~v~g~ 222 (364)
|+.+|.+...+..++. +..++++.=+-|+.|-..
T Consensus 152 YcaTKAaiHsyt~aLR~Qlk~t~veVIE~~PP~V~t~ 188 (245)
T COG3967 152 YCATKAAIHSYTLALREQLKDTSVEVIELAPPLVDTT 188 (245)
T ss_pred chhhHHHHHHHHHHHHHHhhhcceEEEEecCCceecC
Confidence 9999999887766553 444788888888877653
|
|
| >KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only] | Back alignment and domain information |
|---|
Probab=98.99 E-value=9.1e-09 Score=88.69 Aligned_cols=153 Identities=16% Similarity=0.083 Sum_probs=104.0
Q ss_pred CCCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhh----hCCceEEEccCChhhH--Hhh---------c
Q 017914 56 WQSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELE----QSGFDVHLFNANETAL--MIL---------T 119 (364)
Q Consensus 56 ~~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~----~~~~~~~~~D~~~~~~--~~~---------~ 119 (364)
....+-||||| -...|..++++|.++|+.|.+..-.++..+.+. +++...+..|+++++. ++. .
T Consensus 26 ~~~~k~VlITGCDSGfG~~LA~~L~~~Gf~V~Agcl~~~gae~L~~~~~s~rl~t~~LDVT~~esi~~a~~~V~~~l~~~ 105 (322)
T KOG1610|consen 26 SLSDKAVLITGCDSGFGRLLAKKLDKKGFRVFAGCLTEEGAESLRGETKSPRLRTLQLDVTKPESVKEAAQWVKKHLGED 105 (322)
T ss_pred ccCCcEEEEecCCcHHHHHHHHHHHhcCCEEEEEeecCchHHHHhhhhcCCcceeEeeccCCHHHHHHHHHHHHHhcccc
Confidence 44567899999 344599999999999999999987766655543 4677888999999875 111 2
Q ss_pred cCceeeEEEEecCCCC--CC---CChhhhHHHHHHHHhh---------cCCccEEEEEccceeecCCCCccccCCCCCCC
Q 017914 120 TLKNYTHLLVSIPPLE--GT---GDPMLKHGELLRSTLM---------NGHLQWLGYLSSTGVYGHSGGAWVDEDYPANP 185 (364)
Q Consensus 120 ~~d~v~~~~~~~~~~~--~~---~~~~~~~~~~l~~a~~---------~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~ 185 (364)
+.-+++|.|+...... .+ ++.......|++++++ +.--.|+|++||.. |. .+...
T Consensus 106 gLwglVNNAGi~~~~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr~arGRvVnvsS~~--GR---------~~~p~ 174 (322)
T KOG1610|consen 106 GLWGLVNNAGISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLRRARGRVVNVSSVL--GR---------VALPA 174 (322)
T ss_pred cceeEEeccccccccCccccccHHHHHHHHhhhhhhHHHHHHHHHHHHHhccCeEEEecccc--cC---------ccCcc
Confidence 4567888876432221 11 1222233446555553 22234999999864 21 12224
Q ss_pred CChhHHHHHHHHHHHHHhh---hhcCCcEEEEEecce
Q 017914 186 TTELGRLRLSAEKGWLNLG---RDLGISAQVFRLGGI 219 (364)
Q Consensus 186 ~~~Y~~sK~~~E~~~~~~~---~~~~~~~~ilRp~~v 219 (364)
..+|+.||.+.|.+...+. ..+|+++.+|-||.+
T Consensus 175 ~g~Y~~SK~aVeaf~D~lR~EL~~fGV~VsiiePG~f 211 (322)
T KOG1610|consen 175 LGPYCVSKFAVEAFSDSLRRELRPFGVKVSIIEPGFF 211 (322)
T ss_pred cccchhhHHHHHHHHHHHHHHHHhcCcEEEEeccCcc
Confidence 5789999999999887765 346999999999943
|
|
| >KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.96 E-value=2.1e-08 Score=80.08 Aligned_cols=199 Identities=12% Similarity=-0.008 Sum_probs=119.8
Q ss_pred CCCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhh----hh-CCceEEEccCChhhH---------Hhhcc
Q 017914 56 WQSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKEL----EQ-SGFDVHLFNANETAL---------MILTT 120 (364)
Q Consensus 56 ~~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l----~~-~~~~~~~~D~~~~~~---------~~~~~ 120 (364)
..+.+..+||| +..||+++++.|.++|++|.+.+++....+.. .. .+...+.+|+.++.. +.+..
T Consensus 11 r~~sk~~~vtGg~sGIGrAia~~la~~Garv~v~dl~~~~A~ata~~L~g~~~h~aF~~DVS~a~~v~~~l~e~~k~~g~ 90 (256)
T KOG1200|consen 11 RLMSKVAAVTGGSSGIGRAIAQLLAKKGARVAVADLDSAAAEATAGDLGGYGDHSAFSCDVSKAHDVQNTLEEMEKSLGT 90 (256)
T ss_pred HHhcceeEEecCCchHHHHHHHHHHhcCcEEEEeecchhhHHHHHhhcCCCCccceeeeccCcHHHHHHHHHHHHHhcCC
Confidence 34557889998 88899999999999999999999976654432 22 245678899998653 12245
Q ss_pred CceeeEEEEecCCCCCC---CChhh-hHHHHHHHH------h-h-----cCCccEEEEEccce-eecCCCCccccCCCCC
Q 017914 121 LKNYTHLLVSIPPLEGT---GDPML-KHGELLRST------L-M-----NGHLQWLGYLSSTG-VYGHSGGAWVDEDYPA 183 (364)
Q Consensus 121 ~d~v~~~~~~~~~~~~~---~~~~~-~~~~~l~~a------~-~-----~~~~~r~v~~Ss~~-vy~~~~~~~~~E~~~~ 183 (364)
+++++++++.....--. ++.+. ....|+... + + ..+.-++|.+||+- --|+-
T Consensus 91 psvlVncAGItrD~~Llrmkq~qwd~vi~vNL~gvfl~tqaa~r~~~~~~~~~~sIiNvsSIVGkiGN~----------- 159 (256)
T KOG1200|consen 91 PSVLVNCAGITRDGLLLRMKQEQWDSVIAVNLTGVFLVTQAAVRAMVMNQQQGLSIINVSSIVGKIGNF----------- 159 (256)
T ss_pred CcEEEEcCccccccceeeccHHHHHHHHHhhchhhHHHHHHHHHHHHHhcCCCceEEeehhhhcccccc-----------
Confidence 68888888765443211 11111 111222211 1 1 22233899999852 12221
Q ss_pred CCCChhHHHHHHHHHH----HHHhhhhcCCcEEEEEecceecCCCC-----hHHHHHHhcCcccccccccCCcccccccH
Q 017914 184 NPTTELGRLRLSAEKG----WLNLGRDLGISAQVFRLGGIYGPGRS-----SVDTIIKQLPLSEGQKMRRARQYTSRIHV 254 (364)
Q Consensus 184 ~~~~~Y~~sK~~~E~~----~~~~~~~~~~~~~ilRp~~v~g~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~i~v 254 (364)
....|+.+|.-.--+ .++.+ +.++++.++-||++-.|-.. .+..++...++... =..
T Consensus 160 -GQtnYAAsK~GvIgftktaArEla-~knIrvN~VlPGFI~tpMT~~mp~~v~~ki~~~iPmgr~------------G~~ 225 (256)
T KOG1200|consen 160 -GQTNYAASKGGVIGFTKTAARELA-RKNIRVNVVLPGFIATPMTEAMPPKVLDKILGMIPMGRL------------GEA 225 (256)
T ss_pred -cchhhhhhcCceeeeeHHHHHHHh-hcCceEeEeccccccChhhhhcCHHHHHHHHccCCcccc------------CCH
Confidence 223466666543222 22333 34899999999998776532 23333333333222 236
Q ss_pred HHHHHHHHHHccCCCC---CceEEEeCC
Q 017914 255 DDICQVLSASIDKPSA---WNVYNVVDD 279 (364)
Q Consensus 255 ~Dva~~~~~~l~~~~~---g~~~~i~~~ 279 (364)
+|+|..++.+...... |..+.+.+|
T Consensus 226 EevA~~V~fLAS~~ssYiTG~t~evtGG 253 (256)
T KOG1200|consen 226 EEVANLVLFLASDASSYITGTTLEVTGG 253 (256)
T ss_pred HHHHHHHHHHhccccccccceeEEEecc
Confidence 9999998888754432 778888776
|
|
| >KOG1611 consensus Predicted short chain-type dehydrogenase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.92 E-value=1.2e-07 Score=77.81 Aligned_cols=193 Identities=15% Similarity=0.076 Sum_probs=115.5
Q ss_pred CCeEEEEc-CChhhHHHHHHHHhC-CCEEEEE-EeCchhh-hhhh-----hCCceEEEccCChhhH--Hh---------h
Q 017914 59 PNRMLILG-MGFVGRIFAEKIKNQ-GWVVSGT-CTNVMKK-KELE-----QSGFDVHLFNANETAL--MI---------L 118 (364)
Q Consensus 59 ~~~vlVtG-tG~iG~~l~~~L~~~-g~~V~~~-~r~~~~~-~~l~-----~~~~~~~~~D~~~~~~--~~---------~ 118 (364)
++.|+||| +..||-.|+++|++. |.+++.. .|+++.. .+++ ..++++++.|+++.+. .. .
T Consensus 3 pksv~ItGaNRGIGlgLVk~llk~~~i~~iiat~r~~e~a~~~l~~k~~~d~rvHii~Ldvt~deS~~~~~~~V~~iVg~ 82 (249)
T KOG1611|consen 3 PKSVFITGANRGIGLGLVKELLKDKGIEVIIATARDPEKAATELALKSKSDSRVHIIQLDVTCDESIDNFVQEVEKIVGS 82 (249)
T ss_pred CccEEEeccCcchhHHHHHHHhcCCCcEEEEEecCChHHhhHHHHHhhccCCceEEEEEecccHHHHHHHHHHHHhhccc
Confidence 46799999 888999999999976 6666554 4556662 2222 3689999999998664 11 1
Q ss_pred ccCceeeEEEEecCCCCCCCChhh-----hHHHH----------HHHHhhcCC-----------ccEEEEEccceeecCC
Q 017914 119 TTLKNYTHLLVSIPPLEGTGDPML-----KHGEL----------LRSTLMNGH-----------LQWLGYLSSTGVYGHS 172 (364)
Q Consensus 119 ~~~d~v~~~~~~~~~~~~~~~~~~-----~~~~~----------l~~a~~~~~-----------~~r~v~~Ss~~vy~~~ 172 (364)
.+++..++.++..........+.. .+..| ++-.++++. ...+|++||... ..
T Consensus 83 ~GlnlLinNaGi~~~y~~~~~~~r~~~~~~~~tN~v~~il~~Q~~lPLLkkaas~~~gd~~s~~raaIinisS~~~--s~ 160 (249)
T KOG1611|consen 83 DGLNLLINNAGIALSYNTVLKPSRAVLLEQYETNAVGPILLTQAFLPLLKKAASKVSGDGLSVSRAAIINISSSAG--SI 160 (249)
T ss_pred CCceEEEeccceeeecccccCCcHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhcccCCcccccceeEEEeecccc--cc
Confidence 345666666665544332222111 11111 111122221 226898987542 11
Q ss_pred CCccccCCCCCCCCChhHHHHHHHHHHHHHhhh---hcCCcEEEEEecceecCCCChHHHHHHhcCcccccccccCCccc
Q 017914 173 GGAWVDEDYPANPTTELGRLRLSAEKGWLNLGR---DLGISAQVFRLGGIYGPGRSSVDTIIKQLPLSEGQKMRRARQYT 249 (364)
Q Consensus 173 ~~~~~~E~~~~~~~~~Y~~sK~~~E~~~~~~~~---~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (364)
. .....+...|.+||.+...+.++.+- +.++-++.+.||+|-..-.+ ++..
T Consensus 161 ~------~~~~~~~~AYrmSKaAlN~f~ksls~dL~~~~ilv~sihPGwV~TDMgg-------------------~~a~- 214 (249)
T KOG1611|consen 161 G------GFRPGGLSAYRMSKAALNMFAKSLSVDLKDDHILVVSIHPGWVQTDMGG-------------------KKAA- 214 (249)
T ss_pred C------CCCCcchhhhHhhHHHHHHHHHHhhhhhcCCcEEEEEecCCeEEcCCCC-------------------CCcc-
Confidence 1 11233567899999999999888753 34677888999988543221 2222
Q ss_pred ccccHHHHHHHHHHHccCC---CCCceEEEeCCCCC
Q 017914 250 SRIHVDDICQVLSASIDKP---SAWNVYNVVDDDPA 282 (364)
Q Consensus 250 ~~i~v~Dva~~~~~~l~~~---~~g~~~~i~~~~~~ 282 (364)
+.+++-+.-++..+.+- ..|.-||. ++.++
T Consensus 215 --ltveeSts~l~~~i~kL~~~hnG~ffn~-dlt~i 247 (249)
T KOG1611|consen 215 --LTVEESTSKLLASINKLKNEHNGGFFNR-DGTPI 247 (249)
T ss_pred --cchhhhHHHHHHHHHhcCcccCcceEcc-CCCcC
Confidence 66777777777766543 34656664 33443
|
|
| >KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only] | Back alignment and domain information |
|---|
Probab=98.91 E-value=1.5e-08 Score=83.09 Aligned_cols=206 Identities=11% Similarity=0.005 Sum_probs=121.6
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhh-------hCCceEEEccCChhhH------Hhhc---
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELE-------QSGFDVHLFNANETAL------MILT--- 119 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~-------~~~~~~~~~D~~~~~~------~~~~--- 119 (364)
.+++++++|| .|.||..+.++|+++|..+.++.-+.++.+... ...+.++++|+++... +.+.
T Consensus 3 ~tGKna~vtggagGIGl~~sk~Ll~kgik~~~i~~~~En~~a~akL~ai~p~~~v~F~~~DVt~~~~~~~~f~ki~~~fg 82 (261)
T KOG4169|consen 3 LTGKNALVTGGAGGIGLATSKALLEKGIKVLVIDDSEENPEAIAKLQAINPSVSVIFIKCDVTNRGDLEAAFDKILATFG 82 (261)
T ss_pred ccCceEEEecCCchhhHHHHHHHHHcCchheeehhhhhCHHHHHHHhccCCCceEEEEEeccccHHHHHHHHHHHHHHhC
Confidence 3478999998 899999999999999999888887766654432 2467899999999542 2223
Q ss_pred cCceeeEEEEecCCCCCCCChhhhHHHHHHHH----------hh-cC--CccEEEEEccceeecCCCCccccCCCCCCCC
Q 017914 120 TLKNYTHLLVSIPPLEGTGDPMLKHGELLRST----------LM-NG--HLQWLGYLSSTGVYGHSGGAWVDEDYPANPT 186 (364)
Q Consensus 120 ~~d~v~~~~~~~~~~~~~~~~~~~~~~~l~~a----------~~-~~--~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~ 186 (364)
.+|++++.++.... .+.......|+... .. +. .-.-+|..||+ +|-. |....
T Consensus 83 ~iDIlINgAGi~~d----kd~e~Ti~vNLtgvin~T~~alpyMdk~~gG~GGiIvNmsSv--~GL~---------P~p~~ 147 (261)
T KOG4169|consen 83 TIDILINGAGILDD----KDWERTINVNLTGVINGTQLALPYMDKKQGGKGGIIVNMSSV--AGLD---------PMPVF 147 (261)
T ss_pred ceEEEEcccccccc----hhHHHhhccchhhhhhhhhhhhhhhhhhcCCCCcEEEEeccc--cccC---------ccccc
Confidence 34555555543221 11111222233222 21 11 12358888885 3321 11123
Q ss_pred ChhHHHHHHHHHHHHHh-----hhhcCCcEEEEEecceecCCCChHHHHHHhcCcc-cccccccCCcccccccHHHHHHH
Q 017914 187 TELGRLRLSAEKGWLNL-----GRDLGISAQVFRLGGIYGPGRSSVDTIIKQLPLS-EGQKMRRARQYTSRIHVDDICQV 260 (364)
Q Consensus 187 ~~Y~~sK~~~E~~~~~~-----~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~v~Dva~~ 260 (364)
..|+.||...-.+.|.+ .+++|+++..+.||.+-.. .+..+.....+. ....+..--....--+..+++..
T Consensus 148 pVY~AsKaGVvgFTRSla~~ayy~~sGV~~~avCPG~t~t~---l~~~~~~~~~~~e~~~~~~~~l~~~~~q~~~~~a~~ 224 (261)
T KOG4169|consen 148 PVYAASKAGVVGFTRSLADLAYYQRSGVRFNAVCPGFTRTD---LAENIDASGGYLEYSDSIKEALERAPKQSPACCAIN 224 (261)
T ss_pred hhhhhcccceeeeehhhhhhhhHhhcCEEEEEECCCcchHH---HHHHHHhcCCcccccHHHHHHHHHcccCCHHHHHHH
Confidence 46999998876666653 3467999999999865221 111111100000 00000000000112447899999
Q ss_pred HHHHccCCCCCceEEEeCCC
Q 017914 261 LSASIDKPSAWNVYNVVDDD 280 (364)
Q Consensus 261 ~~~~l~~~~~g~~~~i~~~~ 280 (364)
++.+++.+..|.+|-+..+.
T Consensus 225 ~v~aiE~~~NGaiw~v~~g~ 244 (261)
T KOG4169|consen 225 IVNAIEYPKNGAIWKVDSGS 244 (261)
T ss_pred HHHHHhhccCCcEEEEecCc
Confidence 99999999889999887764
|
|
| >PRK06300 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.88 E-value=9.8e-08 Score=85.05 Aligned_cols=202 Identities=9% Similarity=-0.001 Sum_probs=110.9
Q ss_pred CCCCeEEEEcC---ChhhHHHHHHHHhCCCEEEEEEeCc---------hhhhh--h--hhCC-------ceEEEccCChh
Q 017914 57 QSPNRMLILGM---GFVGRIFAEKIKNQGWVVSGTCTNV---------MKKKE--L--EQSG-------FDVHLFNANET 113 (364)
Q Consensus 57 ~~~~~vlVtGt---G~iG~~l~~~L~~~g~~V~~~~r~~---------~~~~~--l--~~~~-------~~~~~~D~~~~ 113 (364)
..+|++||||+ ..||+++++.|.++|++|++.+|.+ +.... . ...+ +..+..|+.+.
T Consensus 6 ~~gk~alITGa~~~~GIG~a~A~~la~~Ga~Vvv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~~~~ 85 (299)
T PRK06300 6 LTGKIAFIAGIGDDQGYGWGIAKALAEAGATILVGTWVPIYKIFSQSLELGKFDASRKLSNGSLLTFAKIYPMDASFDTP 85 (299)
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHHHCCCEEEEEeccchhhhhhhhcccccccccccccccchhhhhhHHHhhhhcCCC
Confidence 45789999984 6899999999999999999976531 00000 0 0000 00111222221
Q ss_pred -------------------hH--------HhhccCceeeEEEEecCC-CCCCC-----ChhhhHHHHHH----------H
Q 017914 114 -------------------AL--------MILTTLKNYTHLLVSIPP-LEGTG-----DPMLKHGELLR----------S 150 (364)
Q Consensus 114 -------------------~~--------~~~~~~d~v~~~~~~~~~-~~~~~-----~~~~~~~~~l~----------~ 150 (364)
+. ..+..+|+++|.++.... ..... +.......|+. .
T Consensus 86 ~~v~~~i~~~~~~~~~~~~si~~~~~~v~~~~G~lDvLVnNAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~l~~a~~p 165 (299)
T PRK06300 86 EDVPEEIRENKRYKDLSGYTISEVAEQVKKDFGHIDILVHSLANSPEISKPLLETSRKGYLAALSTSSYSFVSLLSHFGP 165 (299)
T ss_pred EEeecccCccccccCCCHHHHHHHHHHHHHHcCCCcEEEECCCcCcccCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 21 122457999998864321 11111 11112222332 2
Q ss_pred HhhcCCccEEEEEccceeecCCCCccccCCCCCCCC-ChhHHHHHHHHHHHHHhhhh----cCCcEEEEEecceecCCCC
Q 017914 151 TLMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANPT-TELGRLRLSAEKGWLNLGRD----LGISAQVFRLGGIYGPGRS 225 (364)
Q Consensus 151 a~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~-~~Y~~sK~~~E~~~~~~~~~----~~~~~~ilRp~~v~g~~~~ 225 (364)
.++.. .++|++||........ .. ..|+.+|...+.+.+.++.+ +|++++.|.||.+-.+...
T Consensus 166 ~m~~~--G~ii~iss~~~~~~~p-----------~~~~~Y~asKaAl~~lt~~la~el~~~~gIrVn~V~PG~v~T~~~~ 232 (299)
T PRK06300 166 IMNPG--GSTISLTYLASMRAVP-----------GYGGGMSSAKAALESDTKVLAWEAGRRWGIRVNTISAGPLASRAGK 232 (299)
T ss_pred HhhcC--CeEEEEeehhhcCcCC-----------CccHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEEEeCCccChhhh
Confidence 22233 4788887754221100 11 26999999999998888753 3899999999987654211
Q ss_pred hH---HHHHHhcCcccccccccCCcccccccHHHHHHHHHHHccCC---CCCceEEEeCC
Q 017914 226 SV---DTIIKQLPLSEGQKMRRARQYTSRIHVDDICQVLSASIDKP---SAWNVYNVVDD 279 (364)
Q Consensus 226 ~~---~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~---~~g~~~~i~~~ 279 (364)
.+ ...... ...... ...+...+|+|.+++.++... -.|+++.+.++
T Consensus 233 ~~~~~~~~~~~--~~~~~p------~~r~~~peevA~~v~~L~s~~~~~itG~~i~vdGG 284 (299)
T PRK06300 233 AIGFIERMVDY--YQDWAP------LPEPMEAEQVGAAAAFLVSPLASAITGETLYVDHG 284 (299)
T ss_pred cccccHHHHHH--HHhcCC------CCCCcCHHHHHHHHHHHhCccccCCCCCEEEECCC
Confidence 00 011100 000000 012356899999999988754 23778877655
|
|
| >COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only] | Back alignment and domain information |
|---|
Probab=98.84 E-value=1.1e-07 Score=82.83 Aligned_cols=153 Identities=12% Similarity=-0.010 Sum_probs=97.2
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchh--hhh---hhh----CCceEEEccCCh-hhH-----H----
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMK--KKE---LEQ----SGFDVHLFNANE-TAL-----M---- 116 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~--~~~---l~~----~~~~~~~~D~~~-~~~-----~---- 116 (364)
..+++||||| ++.||..+++.|.++|+.|+++.|+... .+. ... ..+.+...|+++ .+. .
T Consensus 3 ~~~~~ilITGas~GiG~aia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~~v~~~~~~~~~ 82 (251)
T COG1028 3 LSGKVALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIKEAGGGRAAAVAADVSDDEESVEALVAAAEE 82 (251)
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEcCCCchhhHHHHHHHHHhcCCCcEEEEEecCCCCHHHHHHHHHHHHH
Confidence 4568999999 8999999999999999999988887543 121 122 246677799997 553 1
Q ss_pred hhccCceeeEEEEecCCC-C--CCC--ChhhhHHHHHHHHhh-----cCCcc--EEEEEccceeecCCCCccccCCCCCC
Q 017914 117 ILTTLKNYTHLLVSIPPL-E--GTG--DPMLKHGELLRSTLM-----NGHLQ--WLGYLSSTGVYGHSGGAWVDEDYPAN 184 (364)
Q Consensus 117 ~~~~~d~v~~~~~~~~~~-~--~~~--~~~~~~~~~l~~a~~-----~~~~~--r~v~~Ss~~vy~~~~~~~~~E~~~~~ 184 (364)
.+..+|.+++.++..... . ... +.......|+..... ....+ ++|++||.... .....
T Consensus 83 ~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~Iv~isS~~~~-~~~~~--------- 152 (251)
T COG1028 83 EFGRIDILVNNAGIAGPDAPLEELTEEDWDRVIDVNLLGAFLLTRAALPLMKKQRIVNISSVAGL-GGPPG--------- 152 (251)
T ss_pred HcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHhhhhCeEEEECCchhc-CCCCC---------
Confidence 123478778877764321 1 111 111112223221111 00111 89999987543 21110
Q ss_pred CCChhHHHHHHHHHHHHHhhhh---cCCcEEEEEeccee
Q 017914 185 PTTELGRLRLSAEKGWLNLGRD---LGISAQVFRLGGIY 220 (364)
Q Consensus 185 ~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~ 220 (364)
...|+.+|.+.+.+.+.++.+ .|+.++.+.||.+-
T Consensus 153 -~~~Y~~sK~al~~~~~~l~~e~~~~gi~v~~v~PG~~~ 190 (251)
T COG1028 153 -QAAYAASKAALIGLTKALALELAPRGIRVNAVAPGYID 190 (251)
T ss_pred -cchHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEeccCC
Confidence 367999999999998888743 57999999999544
|
|
| >KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=98.84 E-value=8.6e-08 Score=75.14 Aligned_cols=200 Identities=12% Similarity=0.052 Sum_probs=123.6
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhh--CC-ceEEEccCChhhH--Hhhc---cCceeeEE
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQ--SG-FDVHLFNANETAL--MILT---TLKNYTHL 127 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~--~~-~~~~~~D~~~~~~--~~~~---~~d~v~~~ 127 (364)
..++.|+||| .-.||+.++..|.+.|..|+++.|++.+...+-. +. ++.+.+|+.+-+. +.+. -+|..++.
T Consensus 5 laG~~vlvTgagaGIG~~~v~~La~aGA~ViAvaR~~a~L~sLV~e~p~~I~Pi~~Dls~wea~~~~l~~v~pidgLVNN 84 (245)
T KOG1207|consen 5 LAGVIVLVTGAGAGIGKEIVLSLAKAGAQVIAVARNEANLLSLVKETPSLIIPIVGDLSAWEALFKLLVPVFPIDGLVNN 84 (245)
T ss_pred ccceEEEeecccccccHHHHHHHHhcCCEEEEEecCHHHHHHHHhhCCcceeeeEecccHHHHHHHhhcccCchhhhhcc
Confidence 4578999999 4569999999999999999999999988776643 33 7899999998442 4443 34777766
Q ss_pred EEecCCCC-------CCCChh---hhHHHHHHHH----hh-cCCccEEEEEccceeecCCCCccccCCCCCCCCChhHHH
Q 017914 128 LVSIPPLE-------GTGDPM---LKHGELLRST----LM-NGHLQWLGYLSSTGVYGHSGGAWVDEDYPANPTTELGRL 192 (364)
Q Consensus 128 ~~~~~~~~-------~~~~~~---~~~~~~l~~a----~~-~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~~s 192 (364)
++...... +++... .....++.+. +- +.....+|.+||....- +..-.+.|+.+
T Consensus 85 AgvA~~~pf~eiT~q~fDr~F~VNvravi~v~Q~var~lv~R~~~GaIVNvSSqas~R-----------~~~nHtvYcat 153 (245)
T KOG1207|consen 85 AGVATNHPFGEITQQSFDRTFAVNVRAVILVAQLVARNLVDRQIKGAIVNVSSQASIR-----------PLDNHTVYCAT 153 (245)
T ss_pred chhhhcchHHHHhHHhhcceeeeeeeeeeeHHHHHHHhhhhccCCceEEEecchhccc-----------ccCCceEEeec
Confidence 65432211 000000 0000111111 11 22223589999864321 22233679999
Q ss_pred HHHHHHHHHHhhhhc---CCcEEEEEecceecCCC-Ch------HHHHHHhcCcccccccccCCcccccccHHHHHHHHH
Q 017914 193 RLSAEKGWLNLGRDL---GISAQVFRLGGIYGPGR-SS------VDTIIKQLPLSEGQKMRRARQYTSRIHVDDICQVLS 262 (364)
Q Consensus 193 K~~~E~~~~~~~~~~---~~~~~ilRp~~v~g~~~-~~------~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~ 262 (364)
|.+.+.+.+..+-+. .+++..+.|..+..... .. -..++...++ --|..++.++.+++
T Consensus 154 KaALDmlTk~lAlELGp~kIRVNsVNPTVVmT~MG~dnWSDP~K~k~mL~riPl------------~rFaEV~eVVnA~l 221 (245)
T KOG1207|consen 154 KAALDMLTKCLALELGPQKIRVNSVNPTVVMTDMGRDNWSDPDKKKKMLDRIPL------------KRFAEVDEVVNAVL 221 (245)
T ss_pred HHHHHHHHHHHHHhhCcceeEeeccCCeEEEecccccccCCchhccchhhhCch------------hhhhHHHHHHhhhe
Confidence 999998887776544 47888898888775421 11 1112222211 22466899999999
Q ss_pred HHccCCCC---CceEEEeCC
Q 017914 263 ASIDKPSA---WNVYNVVDD 279 (364)
Q Consensus 263 ~~l~~~~~---g~~~~i~~~ 279 (364)
.++..... |....+-+|
T Consensus 222 fLLSd~ssmttGstlpveGG 241 (245)
T KOG1207|consen 222 FLLSDNSSMTTGSTLPVEGG 241 (245)
T ss_pred eeeecCcCcccCceeeecCC
Confidence 98876533 666665554
|
|
| >PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain | Back alignment and domain information |
|---|
Probab=98.83 E-value=1.1e-07 Score=78.53 Aligned_cols=145 Identities=17% Similarity=0.163 Sum_probs=91.6
Q ss_pred eEEEEc-CChhhHHHHHHHHhCC-CEEEEEEeCch-h------hhhhhh--CCceEEEccCChhhH--Hhh-------cc
Q 017914 61 RMLILG-MGFVGRIFAEKIKNQG-WVVSGTCTNVM-K------KKELEQ--SGFDVHLFNANETAL--MIL-------TT 120 (364)
Q Consensus 61 ~vlVtG-tG~iG~~l~~~L~~~g-~~V~~~~r~~~-~------~~~l~~--~~~~~~~~D~~~~~~--~~~-------~~ 120 (364)
++|||| +|.||..+++.|.++| .+|+++.|+.. . ...+.+ ..+.++.+|++|++. ..+ ..
T Consensus 2 tylitGG~gglg~~la~~La~~~~~~~il~~r~~~~~~~~~~~i~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~~~~~~~~ 81 (181)
T PF08659_consen 2 TYLITGGLGGLGQSLARWLAERGARRLILLGRSGAPSAEAEAAIRELESAGARVEYVQCDVTDPEAVAAALAQLRQRFGP 81 (181)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTT-SEEEEEESSGGGSTTHHHHHHHHHHTT-EEEEEE--TTSHHHHHHHHHTSHTTSS-
T ss_pred EEEEECCccHHHHHHHHHHHHcCCCEEEEeccCCCccHHHHHHHHHHHhCCCceeeeccCccCHHHHHHHHHHHHhccCC
Confidence 589998 9999999999999997 48999999832 1 112333 346788999999764 222 25
Q ss_pred CceeeEEEEecCCCCCCC-C---------hhhhHHHHHHHHhhcCCccEEEEEccce-eecCCCCccccCCCCCCCCChh
Q 017914 121 LKNYTHLLVSIPPLEGTG-D---------PMLKHGELLRSTLMNGHLQWLGYLSSTG-VYGHSGGAWVDEDYPANPTTEL 189 (364)
Q Consensus 121 ~d~v~~~~~~~~~~~~~~-~---------~~~~~~~~l~~a~~~~~~~r~v~~Ss~~-vy~~~~~~~~~E~~~~~~~~~Y 189 (364)
+++|+|+++......-.. + +......|+.+++....++.||..||.. ++|... ...|
T Consensus 82 i~gVih~ag~~~~~~~~~~t~~~~~~~~~~Kv~g~~~L~~~~~~~~l~~~i~~SSis~~~G~~g------------q~~Y 149 (181)
T PF08659_consen 82 IDGVIHAAGVLADAPIQDQTPDEFDAVLAPKVRGLWNLHEALENRPLDFFILFSSISSLLGGPG------------QSAY 149 (181)
T ss_dssp EEEEEE-------B-GCC--HHHHHHHHHHHHHHHHHHHHHHTTTTTSEEEEEEEHHHHTT-TT------------BHHH
T ss_pred cceeeeeeeeecccccccCCHHHHHHHHhhhhhHHHHHHHHhhcCCCCeEEEECChhHhccCcc------------hHhH
Confidence 689999998754321111 1 1112235777777777889999999875 444432 2579
Q ss_pred HHHHHHHHHHHHHhhhhcCCcEEEEEecc
Q 017914 190 GRLRLSAEKGWLNLGRDLGISAQVFRLGG 218 (364)
Q Consensus 190 ~~sK~~~E~~~~~~~~~~~~~~~ilRp~~ 218 (364)
+..-...+.+.+... ..|.++..|.-+.
T Consensus 150 aaAN~~lda~a~~~~-~~g~~~~sI~wg~ 177 (181)
T PF08659_consen 150 AAANAFLDALARQRR-SRGLPAVSINWGA 177 (181)
T ss_dssp HHHHHHHHHHHHHHH-HTTSEEEEEEE-E
T ss_pred HHHHHHHHHHHHHHH-hCCCCEEEEEccc
Confidence 999888888876554 4588888887654
|
It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B .... |
| >PRK08309 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.79 E-value=4.7e-08 Score=79.89 Aligned_cols=91 Identities=12% Similarity=0.126 Sum_probs=67.5
Q ss_pred CeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhh-----CCceEEEccCChhhH--Hhh-------ccCcee
Q 017914 60 NRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQ-----SGFDVHLFNANETAL--MIL-------TTLKNY 124 (364)
Q Consensus 60 ~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~-----~~~~~~~~D~~~~~~--~~~-------~~~d~v 124 (364)
|+++||| ||++|. +++.|.++|++|++++|++++...+.. ..+.++.+|++|.+. ..+ ..+|.+
T Consensus 1 m~vlVtGGtG~gg~-la~~L~~~G~~V~v~~R~~~~~~~l~~~l~~~~~i~~~~~Dv~d~~sv~~~i~~~l~~~g~id~l 79 (177)
T PRK08309 1 MHALVIGGTGMLKR-VSLWLCEKGFHVSVIARREVKLENVKRESTTPESITPLPLDYHDDDALKLAIKSTIEKNGPFDLA 79 (177)
T ss_pred CEEEEECcCHHHHH-HHHHHHHCcCEEEEEECCHHHHHHHHHHhhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCeEE
Confidence 5899998 998876 999999999999999998766554322 356778899999663 222 234555
Q ss_pred eEEEEecCCCCCCCChhhhHHHHHHHHhhcCCcc----EEEEE
Q 017914 125 THLLVSIPPLEGTGDPMLKHGELLRSTLMNGHLQ----WLGYL 163 (364)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~----r~v~~ 163 (364)
++.+.. ....++..++++.+++ +|+++
T Consensus 80 v~~vh~------------~~~~~~~~~~~~~gv~~~~~~~~h~ 110 (177)
T PRK08309 80 VAWIHS------------SAKDALSVVCRELDGSSETYRLFHV 110 (177)
T ss_pred EEeccc------------cchhhHHHHHHHHccCCCCceEEEE
Confidence 554432 3467888999999999 89987
|
|
| >PTZ00325 malate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.68 E-value=1e-07 Score=85.07 Aligned_cols=168 Identities=11% Similarity=-0.032 Sum_probs=110.8
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCC--CEEEEEEeCchhhh--hhhhCCceEEEccCChh-h-HHhhccCceeeEEEE
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQG--WVVSGTCTNVMKKK--ELEQSGFDVHLFNANET-A-LMILTTLKNYTHLLV 129 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~--~l~~~~~~~~~~D~~~~-~-~~~~~~~d~v~~~~~ 129 (364)
..|++|+|+| +|.||+.++..|..++ .+++++++...... .+.+........+.+|+ + ...++++|+|+++++
T Consensus 6 ~~~~KI~IiGaaG~VGs~~a~~l~~~~~~~elvL~Di~~~~g~a~Dl~~~~~~~~v~~~td~~~~~~~l~gaDvVVitaG 85 (321)
T PTZ00325 6 LKMFKVAVLGAAGGIGQPLSLLLKQNPHVSELSLYDIVGAPGVAADLSHIDTPAKVTGYADGELWEKALRGADLVLICAG 85 (321)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEecCCCcccccchhhcCcCceEEEecCCCchHHHhCCCCEEEECCC
Confidence 4567999999 5999999999998665 68999998322221 12111222334455553 3 378899999999998
Q ss_pred ecCCCC-CCCChhh---hHHHHHHHHhhcCCccEEEEEccceeecCCCCc--cccCCCCCCCCChhHHHHHHHHHHHHHh
Q 017914 130 SIPPLE-GTGDPML---KHGELLRSTLMNGHLQWLGYLSSTGVYGHSGGA--WVDEDYPANPTTELGRLRLSAEKGWLNL 203 (364)
Q Consensus 130 ~~~~~~-~~~~~~~---~~~~~l~~a~~~~~~~r~v~~Ss~~vy~~~~~~--~~~E~~~~~~~~~Y~~sK~~~E~~~~~~ 203 (364)
...... ...+... ...+++..+++..+++++|+++|-.+-....-. ...+...+.|...||.+-+..-++-...
T Consensus 86 ~~~~~~~tR~dll~~N~~i~~~i~~~i~~~~~~~iviv~SNPvdv~~~~~~~~~~~~sg~p~~~viG~g~LDs~R~r~~l 165 (321)
T PTZ00325 86 VPRKPGMTRDDLFNTNAPIVRDLVAAVASSAPKAIVGIVSNPVNSTVPIAAETLKKAGVYDPRKLFGVTTLDVVRARKFV 165 (321)
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecCcHHHHHHHHHhhhhhccCCChhheeechhHHHHHHHHHH
Confidence 743221 1122222 245688888889999999999985543211110 1124455566677887756666666666
Q ss_pred hhhcCCcEEEEEecceecCCCC
Q 017914 204 GRDLGISAQVFRLGGIYGPGRS 225 (364)
Q Consensus 204 ~~~~~~~~~ilRp~~v~g~~~~ 225 (364)
++..+++...++ ++|+|.+.+
T Consensus 166 a~~l~v~~~~V~-~~VlGeHGd 186 (321)
T PTZ00325 166 AEALGMNPYDVN-VPVVGGHSG 186 (321)
T ss_pred HHHhCcChhheE-EEEEeecCC
Confidence 778888888887 889998764
|
|
| >KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.64 E-value=5.6e-07 Score=77.74 Aligned_cols=154 Identities=10% Similarity=-0.014 Sum_probs=100.0
Q ss_pred CCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhh-------CCceEEEccCChhhH------Hhhcc--Cc
Q 017914 59 PNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQ-------SGFDVHLFNANETAL------MILTT--LK 122 (364)
Q Consensus 59 ~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~-------~~~~~~~~D~~~~~~------~~~~~--~d 122 (364)
+.=.+||| |..||+..+++|+++|++|+.++|+.++.+.+.. -.+..+..|.++++. +.+.+ +.
T Consensus 49 g~WAVVTGaTDGIGKayA~eLAkrG~nvvLIsRt~~KL~~v~kEI~~~~~vev~~i~~Dft~~~~~ye~i~~~l~~~~Vg 128 (312)
T KOG1014|consen 49 GSWAVVTGATDGIGKAYARELAKRGFNVVLISRTQEKLEAVAKEIEEKYKVEVRIIAIDFTKGDEVYEKLLEKLAGLDVG 128 (312)
T ss_pred CCEEEEECCCCcchHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHHhCcEEEEEEEecCCCchhHHHHHHHhcCCceE
Confidence 34578889 9999999999999999999999999998776542 236788899998762 33444 45
Q ss_pred eeeEEEEecCCCC-CCCC-hhhh----HHHHHHH----------HhhcCCccEEEEEccceeecCCCCccccCCCCCCCC
Q 017914 123 NYTHLLVSIPPLE-GTGD-PMLK----HGELLRS----------TLMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANPT 186 (364)
Q Consensus 123 ~v~~~~~~~~~~~-~~~~-~~~~----~~~~l~~----------a~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~ 186 (364)
+++++++...... .+.+ +... ...|+.. -+.+.+..-+|++||.+-. .|..-.
T Consensus 129 ILVNNvG~~~~~P~~f~~~~~~~~~~ii~vN~~~~~~~t~~ilp~M~~r~~G~IvnigS~ag~-----------~p~p~~ 197 (312)
T KOG1014|consen 129 ILVNNVGMSYDYPESFLKYPEGELQNIINVNILSVTLLTQLILPGMVERKKGIIVNIGSFAGL-----------IPTPLL 197 (312)
T ss_pred EEEecccccCCCcHHHHhCchhhhhheeEEecchHHHHHHHhhhhhhcCCCceEEEecccccc-----------ccChhH
Confidence 6777777655321 1111 1101 1122222 2234455679999875311 112234
Q ss_pred ChhHHHHHHHHHHHHHhhhh---cCCcEEEEEecceecCC
Q 017914 187 TELGRLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPG 223 (364)
Q Consensus 187 ~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~ 223 (364)
+.|+.+|...+.+...+.++ .|+.+-.+-|..|-++.
T Consensus 198 s~ysasK~~v~~~S~~L~~Ey~~~gI~Vq~v~p~~VaTkm 237 (312)
T KOG1014|consen 198 SVYSASKAFVDFFSRCLQKEYESKGIFVQSVIPYLVATKM 237 (312)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCeEEEEeehhheeccc
Confidence 67999999877776666544 37888888887776653
|
|
| >KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=98.64 E-value=1.7e-06 Score=74.73 Aligned_cols=191 Identities=13% Similarity=0.058 Sum_probs=115.4
Q ss_pred CeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhh--------CCceEEEccCChhhH-----Hhh----ccC
Q 017914 60 NRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQ--------SGFDVHLFNANETAL-----MIL----TTL 121 (364)
Q Consensus 60 ~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~--------~~~~~~~~D~~~~~~-----~~~----~~~ 121 (364)
.+|+||| +..+|..++..+..+|++|+++.|+.++...+.. ..+.+..+|+.|-+. +.+ -.+
T Consensus 34 ~hi~itggS~glgl~la~e~~~~ga~Vti~ar~~~kl~~a~~~l~l~~~~~~v~~~S~d~~~Y~~v~~~~~~l~~~~~~~ 113 (331)
T KOG1210|consen 34 RHILITGGSSGLGLALALECKREGADVTITARSGKKLLEAKAELELLTQVEDVSYKSVDVIDYDSVSKVIEELRDLEGPI 113 (331)
T ss_pred ceEEEecCcchhhHHHHHHHHHccCceEEEeccHHHHHHHHhhhhhhhccceeeEeccccccHHHHHHHHhhhhhccCCc
Confidence 6899997 8889999999999999999999999887655432 235577789977543 222 246
Q ss_pred ceeeEEEEecCCCCCCCCh----hhh------HHHHHHHHh----hcC-CccEEEEEccceeecCCCCccccCCCCCCCC
Q 017914 122 KNYTHLLVSIPPLEGTGDP----MLK------HGELLRSTL----MNG-HLQWLGYLSSTGVYGHSGGAWVDEDYPANPT 186 (364)
Q Consensus 122 d~v~~~~~~~~~~~~~~~~----~~~------~~~~l~~a~----~~~-~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~ 186 (364)
|.++++|+..-+....+.. ... .+.|+..++ +.. +..+++.+||...- .+....
T Consensus 114 d~l~~cAG~~v~g~f~~~s~~~v~~~m~vNylgt~~v~~~~~~~mk~~~~~g~I~~vsS~~a~-----------~~i~Gy 182 (331)
T KOG1210|consen 114 DNLFCCAGVAVPGLFEDLSPEVVEKLMDVNYLGTVNVAKAAARAMKKREHLGRIILVSSQLAM-----------LGIYGY 182 (331)
T ss_pred ceEEEecCcccccccccCCHHHHHHHHHhhhhhhHHHHHHHHHHhhccccCcEEEEehhhhhh-----------cCcccc
Confidence 8888888765443211111 111 122332222 221 13388888774321 122244
Q ss_pred ChhHHHHHHHHHHHHHhhh---hcCCcEEEEEecceecCCCChHHHHHHhcCccccc-ccccCCcccccccHHHHHHHHH
Q 017914 187 TELGRLRLSAEKGWLNLGR---DLGISAQVFRLGGIYGPGRSSVDTIIKQLPLSEGQ-KMRRARQYTSRIHVDDICQVLS 262 (364)
Q Consensus 187 ~~Y~~sK~~~E~~~~~~~~---~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~v~Dva~~~~ 262 (364)
+.|..+|.+.-.+.....+ +.++.++..-|+.+-.|+-.- .+...+... .+..+ -+.+..+++|.+++
T Consensus 183 saYs~sK~alrgLa~~l~qE~i~~~v~Vt~~~P~~~~tpGfE~-----En~tkP~~t~ii~g~---ss~~~~e~~a~~~~ 254 (331)
T KOG1210|consen 183 SAYSPSKFALRGLAEALRQELIKYGVHVTLYYPPDTLTPGFER-----ENKTKPEETKIIEGG---SSVIKCEEMAKAIV 254 (331)
T ss_pred cccccHHHHHHHHHHHHHHHHhhcceEEEEEcCCCCCCCcccc-----ccccCchheeeecCC---CCCcCHHHHHHHHH
Confidence 6788888887766665543 347888888888776664110 001111110 11111 22377899999999
Q ss_pred HHccCCC
Q 017914 263 ASIDKPS 269 (364)
Q Consensus 263 ~~l~~~~ 269 (364)
.-+.+.+
T Consensus 255 ~~~~rg~ 261 (331)
T KOG1210|consen 255 KGMKRGN 261 (331)
T ss_pred hHHhhcC
Confidence 8888764
|
|
| >COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.61 E-value=2.4e-07 Score=83.90 Aligned_cols=93 Identities=14% Similarity=0.144 Sum_probs=74.4
Q ss_pred CCeEEEEcCChhhHHHHHHHHhCC-CEEEEEEeCchhhhhhhh---CCceEEEccCChhh-H-HhhccCceeeEEEEecC
Q 017914 59 PNRMLILGMGFVGRIFAEKIKNQG-WVVSGTCTNVMKKKELEQ---SGFDVHLFNANETA-L-MILTTLKNYTHLLVSIP 132 (364)
Q Consensus 59 ~~~vlVtGtG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~l~~---~~~~~~~~D~~~~~-~-~~~~~~d~v~~~~~~~~ 132 (364)
||+|||+|+|+||+.++..|+++| .+|++.+|+.++...+.. .+++..+.|+.|.+ . +++++.|.|++++..
T Consensus 1 m~~ilviGaG~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~~~~v~~~~vD~~d~~al~~li~~~d~VIn~~p~-- 78 (389)
T COG1748 1 MMKILVIGAGGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELIGGKVEALQVDAADVDALVALIKDFDLVINAAPP-- 78 (389)
T ss_pred CCcEEEECCchhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhccccceeEEecccChHHHHHHHhcCCEEEEeCCc--
Confidence 589999999999999999999998 999999999888777644 36899999999975 3 788999999999842
Q ss_pred CCCCCCChhhhHHHHHHHHhhcCCccEEEEEc
Q 017914 133 PLEGTGDPMLKHGELLRSTLMNGHLQWLGYLS 164 (364)
Q Consensus 133 ~~~~~~~~~~~~~~~l~~a~~~~~~~r~v~~S 164 (364)
....+++++|.+.|+. +|=+|
T Consensus 79 ----------~~~~~i~ka~i~~gv~-yvDts 99 (389)
T COG1748 79 ----------FVDLTILKACIKTGVD-YVDTS 99 (389)
T ss_pred ----------hhhHHHHHHHHHhCCC-EEEcc
Confidence 1233677777777764 44333
|
|
| >TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA | Back alignment and domain information |
|---|
Probab=98.55 E-value=1.4e-06 Score=96.31 Aligned_cols=154 Identities=13% Similarity=0.052 Sum_probs=103.2
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhC-CCEEEEEEeCchh----------------------------------------
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQ-GWVVSGTCTNVMK---------------------------------------- 94 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~-g~~V~~~~r~~~~---------------------------------------- 94 (364)
..++++|||| +|.||..++++|.++ |++|+++.|+...
T Consensus 1995 ~~g~vvLVTGGarGIG~aiA~~LA~~~ga~viL~gRs~~~~~~p~~a~~~~~~~lk~~~~~~l~~~g~~~~P~~i~~~~~ 2074 (2582)
T TIGR02813 1995 NSDDVFLVTGGAKGVTFECALELAKQCQAHFILAGRSSFDDNEPSWAQGKDENELKKAAIQHLQASGEKPTPKKVDALVR 2074 (2582)
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHhcCCEEEEEeCCcccccCchhhhccchHHHHHhhhhhhhhcccccccchhhhccc
Confidence 3567999998 899999999999998 6999999998210
Q ss_pred -----------hhhhhh--CCceEEEccCChhhH--Hhh------ccCceeeEEEEecCCCCCCC----Ch------hhh
Q 017914 95 -----------KKELEQ--SGFDVHLFNANETAL--MIL------TTLKNYTHLLVSIPPLEGTG----DP------MLK 143 (364)
Q Consensus 95 -----------~~~l~~--~~~~~~~~D~~~~~~--~~~------~~~d~v~~~~~~~~~~~~~~----~~------~~~ 143 (364)
...+.. ..+.++.+|++|.+. ..+ ..+|+|+|.++......-.. +. ...
T Consensus 2075 ~~~~~~ei~~~la~l~~~G~~v~y~~~DVtD~~av~~av~~v~~~g~IDgVVhnAGv~~~~~i~~~t~e~f~~v~~~nv~ 2154 (2582)
T TIGR02813 2075 PVLSSLEIAQALAAFKAAGASAEYASADVTNSVSVAATVQPLNKTLQITGIIHGAGVLADKHIQDKTLEEFNAVYGTKVD 2154 (2582)
T ss_pred ccchhHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHhCCCcEEEECCccCCCCCcccCCHHHHHHHHHHHHH
Confidence 000111 246788999999663 222 25899999998654321111 11 112
Q ss_pred HHHHHHHHhhcCCccEEEEEccce-eecCCCCccccCCCCCCCCChhHHHHHHHHHHHHHhhhhc-CCcEEEEEecceec
Q 017914 144 HGELLRSTLMNGHLQWLGYLSSTG-VYGHSGGAWVDEDYPANPTTELGRLRLSAEKGWLNLGRDL-GISAQVFRLGGIYG 221 (364)
Q Consensus 144 ~~~~l~~a~~~~~~~r~v~~Ss~~-vy~~~~~~~~~E~~~~~~~~~Y~~sK~~~E~~~~~~~~~~-~~~~~ilRp~~v~g 221 (364)
...++..++.....++||++||.. .+|.. ....|+.+|...+.+.+.++.+. +.+++.+.+|.+-+
T Consensus 2155 G~~~Ll~al~~~~~~~IV~~SSvag~~G~~------------gqs~YaaAkaaL~~la~~la~~~~~irV~sI~wG~wdt 2222 (2582)
T TIGR02813 2155 GLLSLLAALNAENIKLLALFSSAAGFYGNT------------GQSDYAMSNDILNKAALQLKALNPSAKVMSFNWGPWDG 2222 (2582)
T ss_pred HHHHHHHHHHHhCCCeEEEEechhhcCCCC------------CcHHHHHHHHHHHHHHHHHHHHcCCcEEEEEECCeecC
Confidence 223555555555567899998864 34332 22579999999998888776554 57889999987655
Q ss_pred C
Q 017914 222 P 222 (364)
Q Consensus 222 ~ 222 (364)
.
T Consensus 2223 g 2223 (2582)
T TIGR02813 2223 G 2223 (2582)
T ss_pred C
Confidence 3
|
Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD. |
| >PLN00106 malate dehydrogenase | Back alignment and domain information |
|---|
Probab=98.54 E-value=6.8e-07 Score=79.93 Aligned_cols=164 Identities=10% Similarity=-0.030 Sum_probs=106.8
Q ss_pred CCeEEEEc-CChhhHHHHHHHHhCC--CEEEEEEeCchhhh--hhhhCCceEEEccCC-hhhH-HhhccCceeeEEEEec
Q 017914 59 PNRMLILG-MGFVGRIFAEKIKNQG--WVVSGTCTNVMKKK--ELEQSGFDVHLFNAN-ETAL-MILTTLKNYTHLLVSI 131 (364)
Q Consensus 59 ~~~vlVtG-tG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~--~l~~~~~~~~~~D~~-~~~~-~~~~~~d~v~~~~~~~ 131 (364)
..||+||| +|.||+.++..|..++ .++.+++++..... .+.+........++. +.++ ..++++|+|+|+++..
T Consensus 18 ~~KV~IiGaaG~VG~~~a~~l~~~~~~~el~L~Di~~~~g~a~Dl~~~~~~~~i~~~~~~~d~~~~l~~aDiVVitAG~~ 97 (323)
T PLN00106 18 GFKVAVLGAAGGIGQPLSLLMKMNPLVSELHLYDIANTPGVAADVSHINTPAQVRGFLGDDQLGDALKGADLVIIPAGVP 97 (323)
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCCCEEEEEecCCCCeeEchhhhCCcCceEEEEeCCCCHHHHcCCCCEEEEeCCCC
Confidence 46999999 5999999999999776 48999998762211 122112222333432 2233 6889999999999864
Q ss_pred CCCC-CCCC---hhhhHHHHHHHHhhcCCccEEEEEccceeecCC--CCccccCCCCCCCCChhHHHHHHHHHHHHHhhh
Q 017914 132 PPLE-GTGD---PMLKHGELLRSTLMNGHLQWLGYLSSTGVYGHS--GGAWVDEDYPANPTTELGRLRLSAEKGWLNLGR 205 (364)
Q Consensus 132 ~~~~-~~~~---~~~~~~~~l~~a~~~~~~~r~v~~Ss~~vy~~~--~~~~~~E~~~~~~~~~Y~~sK~~~E~~~~~~~~ 205 (364)
.... ...+ .......++...+++.+.+++|+++|--+=+.. -.........+.|...||.+++..+++-..+++
T Consensus 98 ~~~g~~R~dll~~N~~i~~~i~~~i~~~~p~aivivvSNPvD~~~~i~t~~~~~~s~~p~~~viG~~~LDs~Rl~~~lA~ 177 (323)
T PLN00106 98 RKPGMTRDDLFNINAGIVKTLCEAVAKHCPNALVNIISNPVNSTVPIAAEVLKKAGVYDPKKLFGVTTLDVVRANTFVAE 177 (323)
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCCCccccHHHHHHHHHHcCCCCcceEEEEecchHHHHHHHHHH
Confidence 4321 1111 122334577777778888899988873211000 000122445566778899999999999988999
Q ss_pred hcCCcEEEEEecceecCC
Q 017914 206 DLGISAQVFRLGGIYGPG 223 (364)
Q Consensus 206 ~~~~~~~ilRp~~v~g~~ 223 (364)
..+++..-|+ ++++|.+
T Consensus 178 ~lgv~~~~V~-~~ViGeH 194 (323)
T PLN00106 178 KKGLDPADVD-VPVVGGH 194 (323)
T ss_pred HhCCChhheE-EEEEEeC
Confidence 9999888885 5677766
|
|
| >PF13950 Epimerase_Csub: UDP-glucose 4-epimerase C-term subunit; PDB: 1EK5_A 1I3K_B 1I3M_B 1HZJ_A 1EK6_A 1I3N_A 1I3L_A 2CNB_B 1GY8_D 1NAI_A | Back alignment and domain information |
|---|
Probab=98.48 E-value=1.7e-07 Score=61.84 Aligned_cols=59 Identities=14% Similarity=0.049 Sum_probs=35.2
Q ss_pred HHHHhcCCCCCcccCCCCCCCCCCCccCCCCCCCeEEEchhHHHhcCcccCCCCHHHHHHHHHHHhcccCC
Q 017914 291 AWDLVEKKWPGLLKHRKPRENTESSNEKGSSRGEKRVSNVRMKKELGVRLWHPSYKSGLQSIINQMDQPYQ 361 (364)
Q Consensus 291 i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~e~l~~~~~~~~~~~~ 361 (364)
+.++.|++++..+.. ..+.....+..|++|++++|||+|++ +++|+++++.+|.++|..
T Consensus 2 ~e~vtG~~i~~~~~~-----------rR~GD~~~~~Ad~~kA~~~LgW~p~~-~L~~~i~~~w~W~~~np~ 60 (62)
T PF13950_consen 2 FEKVTGKKIPVEYAP-----------RRPGDPAHLVADISKAREELGWKPKY-SLEDMIRDAWNWQKKNPN 60 (62)
T ss_dssp HHHHHTS---EEEE--------------TT--SEE-B--HHHHHHC----SS-SHHHHHHHHHHHHHHSTT
T ss_pred cHHHHCCCCCceECC-----------CCCCchhhhhCCHHHHHHHhCCCcCC-CHHHHHHHHHHHHHHCcC
Confidence 567888886533211 12334445678999999999999999 999999999999998854
|
... |
| >COG0623 FabI Enoyl-[acyl-carrier-protein] | Back alignment and domain information |
|---|
Probab=98.41 E-value=6.7e-05 Score=62.10 Aligned_cols=207 Identities=15% Similarity=0.122 Sum_probs=116.3
Q ss_pred CCCCCeEEEEc-C--ChhhHHHHHHHHhCCCEEEEEEeCchhh---hhhhh-C-CceEEEccCChhhH---------Hhh
Q 017914 56 WQSPNRMLILG-M--GFVGRIFAEKIKNQGWVVSGTCTNVMKK---KELEQ-S-GFDVHLFNANETAL---------MIL 118 (364)
Q Consensus 56 ~~~~~~vlVtG-t--G~iG~~l~~~L~~~g~~V~~~~r~~~~~---~~l~~-~-~~~~~~~D~~~~~~---------~~~ 118 (364)
...+|++||+| . --|+-.|++.|.++|.++......+.-. .++.+ . ...++.+|+++.+. +..
T Consensus 3 ~L~GK~~lI~Gvan~rSIAwGIAk~l~~~GAeL~fTy~~e~l~krv~~la~~~~s~~v~~cDV~~d~~i~~~f~~i~~~~ 82 (259)
T COG0623 3 LLEGKRILIMGVANNRSIAWGIAKALAEQGAELAFTYQGERLEKRVEELAEELGSDLVLPCDVTNDESIDALFATIKKKW 82 (259)
T ss_pred ccCCceEEEEEecccccHHHHHHHHHHHcCCEEEEEeccHHHHHHHHHHHhhccCCeEEecCCCCHHHHHHHHHHHHHhh
Confidence 35679999999 4 7799999999999999988877655322 22221 2 23578999998653 223
Q ss_pred ccCceeeEEEEecCCCCCCCChhhhHH--------------HHHHHHhh--cCCccEEEEEccceeecCCCCccccCCCC
Q 017914 119 TTLKNYTHLLVSIPPLEGTGDPMLKHG--------------ELLRSTLM--NGHLQWLGYLSSTGVYGHSGGAWVDEDYP 182 (364)
Q Consensus 119 ~~~d~v~~~~~~~~~~~~~~~~~~~~~--------------~~l~~a~~--~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~ 182 (364)
..+|.++|.++..+-..-..+...... ..+..+++ ...-..+|-++- +|...-.
T Consensus 83 g~lD~lVHsIaFa~k~el~G~~~dtsre~f~~a~~IS~YS~~~lak~a~~lM~~ggSiltLtY---lgs~r~v------- 152 (259)
T COG0623 83 GKLDGLVHSIAFAPKEELKGDYLDTSREGFLIAMDISAYSFTALAKAARPLMNNGGSILTLTY---LGSERVV------- 152 (259)
T ss_pred CcccEEEEEeccCChHHhCCcccccCHHHHHhHhhhhHhhHHHHHHHHHHhcCCCCcEEEEEe---ccceeec-------
Confidence 568999999987663321111111111 12222222 111224554432 1111111
Q ss_pred CCCCChhHHHHHHHHHHHHHhhhhc---CCcEEEEEecceec---CCCChHHHHHHhcCcccccccccCCcccccccHHH
Q 017914 183 ANPTTELGRLRLSAEKGWLNLGRDL---GISAQVFRLGGIYG---PGRSSVDTIIKQLPLSEGQKMRRARQYTSRIHVDD 256 (364)
Q Consensus 183 ~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilRp~~v~g---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D 256 (364)
.-.+..+..|...|.-++..+... |+++..+-.|.+=. .+-..+..++...... .++ +--+..+|
T Consensus 153 -PnYNvMGvAKAaLEasvRyLA~dlG~~gIRVNaISAGPIrTLAasgI~~f~~~l~~~e~~--aPl------~r~vt~ee 223 (259)
T COG0623 153 -PNYNVMGVAKAALEASVRYLAADLGKEGIRVNAISAGPIRTLAASGIGDFRKMLKENEAN--APL------RRNVTIEE 223 (259)
T ss_pred -CCCchhHHHHHHHHHHHHHHHHHhCccCeEEeeecccchHHHHhhccccHHHHHHHHHhh--CCc------cCCCCHHH
Confidence 123578999999999998877544 56666655443211 1111233444331111 111 11155788
Q ss_pred HHHHHHHHccCC---CCCceEEEeCCCC
Q 017914 257 ICQVLSASIDKP---SAWNVYNVVDDDP 281 (364)
Q Consensus 257 va~~~~~~l~~~---~~g~~~~i~~~~~ 281 (364)
|+...+.++..- -.|++.++.+|..
T Consensus 224 VG~tA~fLlSdLssgiTGei~yVD~G~~ 251 (259)
T COG0623 224 VGNTAAFLLSDLSSGITGEIIYVDSGYH 251 (259)
T ss_pred hhhhHHHHhcchhcccccceEEEcCCce
Confidence 888777777653 4488888877754
|
|
| >PRK04148 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=98.34 E-value=6.6e-06 Score=63.05 Aligned_cols=93 Identities=15% Similarity=0.115 Sum_probs=76.1
Q ss_pred CCeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCChhhHHhhccCceeeEEEEecCCCCCCC
Q 017914 59 PNRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETALMILTTLKNYTHLLVSIPPLEGTG 138 (364)
Q Consensus 59 ~~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~~~~~~~d~v~~~~~~~~~~~~~~ 138 (364)
+++|+++|.| -|..++..|.+.|++|++++.++...+...+.+++++..|+.+++....+++|.|+-+=
T Consensus 17 ~~kileIG~G-fG~~vA~~L~~~G~~ViaIDi~~~aV~~a~~~~~~~v~dDlf~p~~~~y~~a~liysir---------- 85 (134)
T PRK04148 17 NKKIVELGIG-FYFKVAKKLKESGFDVIVIDINEKAVEKAKKLGLNAFVDDLFNPNLEIYKNAKLIYSIR---------- 85 (134)
T ss_pred CCEEEEEEec-CCHHHHHHHHHCCCEEEEEECCHHHHHHHHHhCCeEEECcCCCCCHHHHhcCCEEEEeC----------
Confidence 4789999999 79999999999999999999999877777777899999999999988888888877642
Q ss_pred ChhhhHHHHHHHHhhcCCccEEEEE
Q 017914 139 DPMLKHGELLRSTLMNGHLQWLGYL 163 (364)
Q Consensus 139 ~~~~~~~~~l~~a~~~~~~~r~v~~ 163 (364)
+-.+.+.-+++.+++-++.-+|..
T Consensus 86 -pp~el~~~~~~la~~~~~~~~i~~ 109 (134)
T PRK04148 86 -PPRDLQPFILELAKKINVPLIIKP 109 (134)
T ss_pred -CCHHHHHHHHHHHHHcCCCEEEEc
Confidence 223556677888888887766644
|
|
| >PRK06720 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=98.31 E-value=5.4e-06 Score=67.38 Aligned_cols=76 Identities=11% Similarity=-0.049 Sum_probs=56.9
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhh----hh--CCceEEEccCChhhH--H-------hhcc
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKEL----EQ--SGFDVHLFNANETAL--M-------ILTT 120 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l----~~--~~~~~~~~D~~~~~~--~-------~~~~ 120 (364)
..++.++||| +|.||+.+++.|.++|++|++.+|+.+..... .. ....++.+|+++.+. . .+..
T Consensus 14 l~gk~~lVTGa~~GIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~v~~~~~~~G~ 93 (169)
T PRK06720 14 LAGKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQATVEEITNLGGEALFVSYDMEKQGDWQRVISITLNAFSR 93 (169)
T ss_pred cCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 3568999999 89999999999999999999999976543322 11 235678899998653 1 1245
Q ss_pred CceeeEEEEecC
Q 017914 121 LKNYTHLLVSIP 132 (364)
Q Consensus 121 ~d~v~~~~~~~~ 132 (364)
+|.++|+++...
T Consensus 94 iDilVnnAG~~~ 105 (169)
T PRK06720 94 IDMLFQNAGLYK 105 (169)
T ss_pred CCEEEECCCcCC
Confidence 899999987644
|
|
| >TIGR00715 precor6x_red precorrin-6x reductase | Back alignment and domain information |
|---|
Probab=98.19 E-value=1e-05 Score=69.94 Aligned_cols=93 Identities=13% Similarity=0.025 Sum_probs=69.3
Q ss_pred CeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCChhh-H-Hhh--ccCceeeEEEEecCCC
Q 017914 60 NRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETA-L-MIL--TTLKNYTHLLVSIPPL 134 (364)
Q Consensus 60 ~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~-~-~~~--~~~d~v~~~~~~~~~~ 134 (364)
|+|||+| ||. |+.|++.|.++|++|++.+++......+...+...+..+..|.+ + ..+ .++|.|++..+.
T Consensus 1 m~ILvlGGT~e-gr~la~~L~~~g~~v~~s~~t~~~~~~~~~~g~~~v~~g~l~~~~l~~~l~~~~i~~VIDAtHP---- 75 (256)
T TIGR00715 1 MTVLLMGGTVD-SRAIAKGLIAQGIEILVTVTTSEGKHLYPIHQALTVHTGALDPQELREFLKRHSIDILVDATHP---- 75 (256)
T ss_pred CeEEEEechHH-HHHHHHHHHhCCCeEEEEEccCCccccccccCCceEEECCCCHHHHHHHHHhcCCCEEEEcCCH----
Confidence 6899997 999 99999999999999999999987666655444444445555544 3 334 458889887742
Q ss_pred CCCCChhhhHHHHHHHHhhcCCccEEEE
Q 017914 135 EGTGDPMLKHGELLRSTLMNGHLQWLGY 162 (364)
Q Consensus 135 ~~~~~~~~~~~~~l~~a~~~~~~~r~v~ 162 (364)
.......|+..+|++.++..+=|
T Consensus 76 -----fA~~is~~a~~a~~~~~ipylR~ 98 (256)
T TIGR00715 76 -----FAAQITTNATAVCKELGIPYVRF 98 (256)
T ss_pred -----HHHHHHHHHHHHHHHhCCcEEEE
Confidence 34467789999999998875544
|
This enzyme was found to be a monomer by gel filtration. |
| >KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=98.12 E-value=1.3e-05 Score=62.88 Aligned_cols=201 Identities=13% Similarity=0.060 Sum_probs=116.9
Q ss_pred CCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhh-h--CCceEEEccCChhhH--Hh-------hccCcee
Q 017914 58 SPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELE-Q--SGFDVHLFNANETAL--MI-------LTTLKNY 124 (364)
Q Consensus 58 ~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~-~--~~~~~~~~D~~~~~~--~~-------~~~~d~v 124 (364)
.+-..|||| +..+|...++.|.++|..|..++...++-.... + .++.+...|++..+. .+ +..+|..
T Consensus 8 kglvalvtggasglg~ataerlakqgasv~lldlp~skg~~vakelg~~~vf~padvtsekdv~aala~ak~kfgrld~~ 87 (260)
T KOG1199|consen 8 KGLVALVTGGASGLGKATAERLAKQGASVALLDLPQSKGADVAKELGGKVVFTPADVTSEKDVRAALAKAKAKFGRLDAL 87 (260)
T ss_pred cCeeEEeecCcccccHHHHHHHHhcCceEEEEeCCcccchHHHHHhCCceEEeccccCcHHHHHHHHHHHHhhccceeee
Confidence 345678997 777999999999999999999998665543322 1 456788899987442 22 2457888
Q ss_pred eEEEEecCCCCCC--C----ChhhhHH----HHHHHHhh---------------cCC-ccEEEEEccceeecCCCCcccc
Q 017914 125 THLLVSIPPLEGT--G----DPMLKHG----ELLRSTLM---------------NGH-LQWLGYLSSTGVYGHSGGAWVD 178 (364)
Q Consensus 125 ~~~~~~~~~~~~~--~----~~~~~~~----~~l~~a~~---------------~~~-~~r~v~~Ss~~vy~~~~~~~~~ 178 (364)
++|++.......+ . ...+.++ .|++.+.+ ..| -..+|.+.|+..|..+.+.
T Consensus 88 vncagia~a~ktyn~~k~~~h~ledfqrvidvn~~gtfnvirl~aglmg~nepdq~gqrgviintasvaafdgq~gq--- 164 (260)
T KOG1199|consen 88 VNCAGIAYAFKTYNVQKKKHHDLEDFQRVIDVNVLGTFNVIRLGAGLMGENEPDQNGQRGVIINTASVAAFDGQTGQ--- 164 (260)
T ss_pred eeccceeeeeeeeeecccccccHHHhhheeeeeeeeeeeeeeehhhhhcCCCCCCCCcceEEEeeceeeeecCccch---
Confidence 8888764432211 1 1111111 22222221 111 1246666676666554443
Q ss_pred CCCCCCCCChhHHHHHHHHHHHHHhhhh---cCCcEEEEEecceecCCCChH-HHHHHh--cCcccccccccCCcccccc
Q 017914 179 EDYPANPTTELGRLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRSSV-DTIIKQ--LPLSEGQKMRRARQYTSRI 252 (364)
Q Consensus 179 E~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~-~~~~~~--~~~~~~~~~~~~~~~~~~i 252 (364)
..|..||...--+..-.++. .|++++.+-||.+-.|--..+ ++.... ..+++...+ =
T Consensus 165 --------aaysaskgaivgmtlpiardla~~gir~~tiapglf~tpllsslpekv~~fla~~ipfpsrl---------g 227 (260)
T KOG1199|consen 165 --------AAYSASKGAIVGMTLPIARDLAGDGIRFNTIAPGLFDTPLLSSLPEKVKSFLAQLIPFPSRL---------G 227 (260)
T ss_pred --------hhhhcccCceEeeechhhhhcccCceEEEeecccccCChhhhhhhHHHHHHHHHhCCCchhc---------C
Confidence 57888887765544444332 378999999887644432211 111111 122333332 2
Q ss_pred cHHHHHHHHHHHccCCCC-CceEEEeC
Q 017914 253 HVDDICQVLSASIDKPSA-WNVYNVVD 278 (364)
Q Consensus 253 ~v~Dva~~~~~~l~~~~~-g~~~~i~~ 278 (364)
|..+.+..+..+++++-. |+++.+.+
T Consensus 228 ~p~eyahlvqaiienp~lngevir~dg 254 (260)
T KOG1199|consen 228 HPHEYAHLVQAIIENPYLNGEVIRFDG 254 (260)
T ss_pred ChHHHHHHHHHHHhCcccCCeEEEecc
Confidence 356667777788888843 67776644
|
|
| >PRK09620 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=98.11 E-value=7.9e-06 Score=69.58 Aligned_cols=76 Identities=18% Similarity=0.182 Sum_probs=49.0
Q ss_pred CCCeEEEE-cC----------------ChhhHHHHHHHHhCCCEEEEEEeCchhh-hhhh-hCCceEEEc--cCChhhHH
Q 017914 58 SPNRMLIL-GM----------------GFVGRIFAEKIKNQGWVVSGTCTNVMKK-KELE-QSGFDVHLF--NANETALM 116 (364)
Q Consensus 58 ~~~~vlVt-Gt----------------G~iG~~l~~~L~~~g~~V~~~~r~~~~~-~~l~-~~~~~~~~~--D~~~~~~~ 116 (364)
.+++|||| |. ||+|++|+++|+++|++|+++++..... ..+. ......+.+ |+.+.-..
T Consensus 2 ~gk~vlITaG~T~E~iD~VR~itN~SSGfiGs~LA~~L~~~Ga~V~li~g~~~~~~~~~~~~~~~~~V~s~~d~~~~l~~ 81 (229)
T PRK09620 2 KGKKVLITSGGCLEKWDQVRGHTNMAKGTIGRIIAEELISKGAHVIYLHGYFAEKPNDINNQLELHPFEGIIDLQDKMKS 81 (229)
T ss_pred CCCEEEEeCCCccCCcCCeeEecCCCcCHHHHHHHHHHHHCCCeEEEEeCCCcCCCcccCCceeEEEEecHHHHHHHHHH
Confidence 35788888 44 9999999999999999999998743211 1111 112234445 33321114
Q ss_pred hh--ccCceeeEEEEecCC
Q 017914 117 IL--TTLKNYTHLLVSIPP 133 (364)
Q Consensus 117 ~~--~~~d~v~~~~~~~~~ 133 (364)
.+ .++|+|+|+|+....
T Consensus 82 ~~~~~~~D~VIH~AAvsD~ 100 (229)
T PRK09620 82 IITHEKVDAVIMAAAGSDW 100 (229)
T ss_pred HhcccCCCEEEECccccce
Confidence 45 368999999987543
|
|
| >COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.11 E-value=2.1e-05 Score=67.01 Aligned_cols=69 Identities=17% Similarity=0.203 Sum_probs=57.6
Q ss_pred CeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhh--CCceEEEccCChhhH---HhhccCceeeEEE
Q 017914 60 NRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQ--SGFDVHLFNANETAL---MILTTLKNYTHLL 128 (364)
Q Consensus 60 ~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~--~~~~~~~~D~~~~~~---~~~~~~d~v~~~~ 128 (364)
|+++|+|.|-+|..+++.|.+.||+|++++++++....... .....+.+|-++++. .-+.++|+++-+.
T Consensus 1 m~iiIiG~G~vG~~va~~L~~~g~~Vv~Id~d~~~~~~~~~~~~~~~~v~gd~t~~~~L~~agi~~aD~vva~t 74 (225)
T COG0569 1 MKIIIIGAGRVGRSVARELSEEGHNVVLIDRDEERVEEFLADELDTHVVIGDATDEDVLEEAGIDDADAVVAAT 74 (225)
T ss_pred CEEEEECCcHHHHHHHHHHHhCCCceEEEEcCHHHHHHHhhhhcceEEEEecCCCHHHHHhcCCCcCCEEEEee
Confidence 68999999999999999999999999999999988766333 678899999999884 2246677776665
|
|
| >PRK06732 phosphopantothenate--cysteine ligase; Validated | Back alignment and domain information |
|---|
Probab=98.03 E-value=1.4e-05 Score=68.22 Aligned_cols=71 Identities=17% Similarity=0.158 Sum_probs=49.1
Q ss_pred eEEEEc--CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCChh--h-H-HhhccCceeeEEEEecC
Q 017914 61 RMLILG--MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANET--A-L-MILTTLKNYTHLLVSIP 132 (364)
Q Consensus 61 ~vlVtG--tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~--~-~-~~~~~~d~v~~~~~~~~ 132 (364)
.=.||+ ||++|++|+++|+++|++|+++.|...... ....++.++.++..+. + . ..+.++|+|+|+|+...
T Consensus 17 VR~itN~SSG~iG~aLA~~L~~~G~~V~li~r~~~~~~-~~~~~v~~i~v~s~~~m~~~l~~~~~~~DivIh~AAvsd 93 (229)
T PRK06732 17 VRGITNHSTGQLGKIIAETFLAAGHEVTLVTTKTAVKP-EPHPNLSIIEIENVDDLLETLEPLVKDHDVLIHSMAVSD 93 (229)
T ss_pred ceeecCccchHHHHHHHHHHHhCCCEEEEEECcccccC-CCCCCeEEEEEecHHHHHHHHHHHhcCCCEEEeCCccCC
Confidence 346674 799999999999999999999998643211 1113566666544432 1 1 44567899999998654
|
|
| >PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus | Back alignment and domain information |
|---|
Probab=97.99 E-value=8.9e-05 Score=56.23 Aligned_cols=67 Identities=24% Similarity=0.323 Sum_probs=55.3
Q ss_pred EEEEcCChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCChhhH---HhhccCceeeEEE
Q 017914 62 MLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETAL---MILTTLKNYTHLL 128 (364)
Q Consensus 62 vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~---~~~~~~d~v~~~~ 128 (364)
|+|+|.|-+|+.+++.|.+.+.+|++++++++....+...++.++.+|.++++. ..++.++.++-+.
T Consensus 1 vvI~G~g~~~~~i~~~L~~~~~~vvvid~d~~~~~~~~~~~~~~i~gd~~~~~~l~~a~i~~a~~vv~~~ 70 (116)
T PF02254_consen 1 VVIIGYGRIGREIAEQLKEGGIDVVVIDRDPERVEELREEGVEVIYGDATDPEVLERAGIEKADAVVILT 70 (116)
T ss_dssp EEEES-SHHHHHHHHHHHHTTSEEEEEESSHHHHHHHHHTTSEEEES-TTSHHHHHHTTGGCESEEEEES
T ss_pred eEEEcCCHHHHHHHHHHHhCCCEEEEEECCcHHHHHHHhcccccccccchhhhHHhhcCccccCEEEEcc
Confidence 678899999999999999987799999999998888888899999999999884 3446667666654
|
The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A .... |
| >KOG1478 consensus 3-keto sterol reductase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.82 E-value=0.00025 Score=59.58 Aligned_cols=162 Identities=15% Similarity=0.100 Sum_probs=96.4
Q ss_pred CCeEEEEc-CChhhHHHHHHHHhCCC-----EEEEEEeCchhhhhh----h------hCCceEEEccCChhhH-------
Q 017914 59 PNRMLILG-MGFVGRIFAEKIKNQGW-----VVSGTCTNVMKKKEL----E------QSGFDVHLFNANETAL------- 115 (364)
Q Consensus 59 ~~~vlVtG-tG~iG~~l~~~L~~~g~-----~V~~~~r~~~~~~~l----~------~~~~~~~~~D~~~~~~------- 115 (364)
.|.+|||| +..+|-.|+.+|++... .+++..|+.++.+.. . ...++++..|+++...
T Consensus 3 RKvalITGanSglGl~i~~RLl~~~De~~~ltl~ltcR~~~kae~vc~~lk~f~p~~~i~~~yvlvD~sNm~Sv~~A~~d 82 (341)
T KOG1478|consen 3 RKVALITGANSGLGLAICKRLLAEDDENVRLTLCLTCRNMSKAEAVCAALKAFHPKSTIEVTYVLVDVSNMQSVFRASKD 82 (341)
T ss_pred ceEEEEecCCCcccHHHHHHHHhccCCceeEEEEEEeCChhHHHHHHHHHHHhCCCceeEEEEEEEehhhHHHHHHHHHH
Confidence 46788889 78899999999998743 466778887776542 1 1457889999999543
Q ss_pred --HhhccCceeeEEEEecCCCCC-C--------CChhh----------------------hHH----------HHHHHHh
Q 017914 116 --MILTTLKNYTHLLVSIPPLEG-T--------GDPML----------------------KHG----------ELLRSTL 152 (364)
Q Consensus 116 --~~~~~~d~v~~~~~~~~~~~~-~--------~~~~~----------------------~~~----------~~l~~a~ 152 (364)
..+...|.|+..|+......- + .++.. .+. +.+...+
T Consensus 83 i~~rf~~ld~iylNAg~~~~~gi~w~~avf~~fsnpv~amt~pt~~~~t~G~is~D~lg~iFetnVFGhfyli~~l~pll 162 (341)
T KOG1478|consen 83 IKQRFQRLDYIYLNAGIMPNPGINWKAAVFGLFSNPVIAMTSPTEGLLTQGKISADGLGEIFETNVFGHFYLIRELEPLL 162 (341)
T ss_pred HHHHhhhccEEEEccccCCCCcccHHHHHHHHhhchhHHhcCchhhhhhcceecccchhhHhhhcccchhhhHhhhhhHh
Confidence 233567888888876554320 0 00000 000 1122222
Q ss_pred hcCCccEEEEEccceeecCCCCccccCCCCCCCCChhHHHHHHHHHHHHHhhhh---cCCcEEEEEecceecC
Q 017914 153 MNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANPTTELGRLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGP 222 (364)
Q Consensus 153 ~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~ 222 (364)
-......+|.+||...-. .......-.......+|..||...+.+-.+..++ .|+.-.++.||.....
T Consensus 163 ~~~~~~~lvwtSS~~a~k--k~lsleD~q~~kg~~pY~sSKrl~DlLh~A~~~~~~~~g~~qyvv~pg~~tt~ 233 (341)
T KOG1478|consen 163 CHSDNPQLVWTSSRMARK--KNLSLEDFQHSKGKEPYSSSKRLTDLLHVALNRNFKPLGINQYVVQPGIFTTN 233 (341)
T ss_pred hcCCCCeEEEEeeccccc--ccCCHHHHhhhcCCCCcchhHHHHHHHHHHHhccccccchhhhcccCceeecc
Confidence 223334789998864321 1111111112345678999999998876665443 2566777778766543
|
|
| >PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase | Back alignment and domain information |
|---|
Probab=97.81 E-value=8.7e-05 Score=69.06 Aligned_cols=88 Identities=18% Similarity=0.223 Sum_probs=64.4
Q ss_pred EEEEcCChhhHHHHHHHHhCC-C-EEEEEEeCchhhhhhh----hCCceEEEccCChhhH--HhhccCceeeEEEEecCC
Q 017914 62 MLILGMGFVGRIFAEKIKNQG-W-VVSGTCTNVMKKKELE----QSGFDVHLFNANETAL--MILTTLKNYTHLLVSIPP 133 (364)
Q Consensus 62 vlVtGtG~iG~~l~~~L~~~g-~-~V~~~~r~~~~~~~l~----~~~~~~~~~D~~~~~~--~~~~~~d~v~~~~~~~~~ 133 (364)
|+|+|.|++|+.+++.|.+++ + +|++.+|+.++...+. ..++..+..|+.|.+. ..+++.|.|++++...
T Consensus 1 IlvlG~G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~dvVin~~gp~-- 78 (386)
T PF03435_consen 1 ILVLGAGRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKLLGDRVEAVQVDVNDPESLAELLRGCDVVINCAGPF-- 78 (386)
T ss_dssp EEEE--SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT--TTTTEEEEE--TTTHHHHHHHHTTSSEEEE-SSGG--
T ss_pred CEEEcCcHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhccccceeEEEEecCCHHHHHHHHhcCCEEEECCccc--
Confidence 789988999999999999986 4 8999999998876653 3588999999999774 6778999999988531
Q ss_pred CCCCCChhhhHHHHHHHHhhcCCccEEEE
Q 017914 134 LEGTGDPMLKHGELLRSTLMNGHLQWLGY 162 (364)
Q Consensus 134 ~~~~~~~~~~~~~~l~~a~~~~~~~r~v~ 162 (364)
....++++|.+.|+ ++|=
T Consensus 79 ----------~~~~v~~~~i~~g~-~yvD 96 (386)
T PF03435_consen 79 ----------FGEPVARACIEAGV-HYVD 96 (386)
T ss_dssp ----------GHHHHHHHHHHHT--EEEE
T ss_pred ----------hhHHHHHHHHHhCC-Ceec
Confidence 34456667766665 3554
|
Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A. |
| >PRK13656 trans-2-enoyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.81 E-value=0.00084 Score=61.05 Aligned_cols=74 Identities=18% Similarity=0.103 Sum_probs=52.8
Q ss_pred CCCCeEEEEc-CChhhHH--HHHHHHhCCCEEEEEEeCchh----------------hhhhhhCC--ceEEEccCChhhH
Q 017914 57 QSPNRMLILG-MGFVGRI--FAEKIKNQGWVVSGTCTNVMK----------------KKELEQSG--FDVHLFNANETAL 115 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~--l~~~L~~~g~~V~~~~r~~~~----------------~~~l~~~~--~~~~~~D~~~~~~ 115 (364)
..+|++|||| ++.+|.+ +++.| +.|.+|+++++..+. ...+...+ +..+.+|+++++.
T Consensus 39 ~ggK~aLVTGaSsGIGlA~~IA~al-~~GA~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~G~~a~~i~~DVss~E~ 117 (398)
T PRK13656 39 NGPKKVLVIGASSGYGLASRIAAAF-GAGADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAAGLYAKSINGDAFSDEI 117 (398)
T ss_pred CCCCEEEEECCCchHhHHHHHHHHH-HcCCeEEEEecCcchhhhcccccccchHHHHHHHHHhcCCceEEEEcCCCCHHH
Confidence 4468999999 8889999 89999 999999988853211 11122223 4578899999663
Q ss_pred ---------HhhccCceeeEEEEec
Q 017914 116 ---------MILTTLKNYTHLLVSI 131 (364)
Q Consensus 116 ---------~~~~~~d~v~~~~~~~ 131 (364)
..+..+|.++|.++..
T Consensus 118 v~~lie~I~e~~G~IDiLVnSaA~~ 142 (398)
T PRK13656 118 KQKVIELIKQDLGQVDLVVYSLASP 142 (398)
T ss_pred HHHHHHHHHHhcCCCCEEEECCccC
Confidence 1224689999998865
|
|
| >cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase | Back alignment and domain information |
|---|
Probab=97.81 E-value=8.3e-05 Score=62.09 Aligned_cols=72 Identities=15% Similarity=0.102 Sum_probs=54.7
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhh-----CCceEEEccCChhh-H-HhhccCceeeEEE
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQ-----SGFDVHLFNANETA-L-MILTTLKNYTHLL 128 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~-----~~~~~~~~D~~~~~-~-~~~~~~d~v~~~~ 128 (364)
..+++++|+| +|.+|+.+++.|.+.|++|++++|+.++...+.+ .+..+...|..+.+ . ..+.++|.|++..
T Consensus 26 l~~~~vlVlGgtG~iG~~~a~~l~~~g~~V~l~~R~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~diVi~at 105 (194)
T cd01078 26 LKGKTAVVLGGTGPVGQRAAVLLAREGARVVLVGRDLERAQKAADSLRARFGEGVGAVETSDDAARAAAIKGADVVFAAG 105 (194)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhhcCCcEEEeeCCCHHHHHHHHhcCCEEEECC
Confidence 4568999999 8999999999999999999999998776554322 24456666776644 2 6677888877754
|
Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo |
| >PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases | Back alignment and domain information |
|---|
Probab=97.76 E-value=9.1e-05 Score=57.82 Aligned_cols=73 Identities=14% Similarity=0.157 Sum_probs=54.0
Q ss_pred CCCCCeEEEEcCChhhHHHHHHHHhCCCE-EEEEEeCchhhhhhhh--CCceEEEccCChhhHHhhccCceeeEEEE
Q 017914 56 WQSPNRMLILGMGFVGRIFAEKIKNQGWV-VSGTCTNVMKKKELEQ--SGFDVHLFNANETALMILTTLKNYTHLLV 129 (364)
Q Consensus 56 ~~~~~~vlVtGtG~iG~~l~~~L~~~g~~-V~~~~r~~~~~~~l~~--~~~~~~~~D~~~~~~~~~~~~d~v~~~~~ 129 (364)
...+++|+|+|+|.+|+.++..|.+.|.+ |+++.|+.++...+.+ .+..+-..++.+.. ..+..+|.|+++..
T Consensus 9 ~l~~~~vlviGaGg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~~~~~~~~~~~~~~~-~~~~~~DivI~aT~ 84 (135)
T PF01488_consen 9 DLKGKRVLVIGAGGAARAVAAALAALGAKEITIVNRTPERAEALAEEFGGVNIEAIPLEDLE-EALQEADIVINATP 84 (135)
T ss_dssp TGTTSEEEEESSSHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHHTGCSEEEEEGGGHC-HHHHTESEEEE-SS
T ss_pred CcCCCEEEEECCHHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHcCccccceeeHHHHH-HHHhhCCeEEEecC
Confidence 45678999999999999999999999975 9999999888776643 12223333444433 56788998888764
|
Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C .... |
| >cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases | Back alignment and domain information |
|---|
Probab=97.76 E-value=0.00017 Score=64.92 Aligned_cols=164 Identities=13% Similarity=0.064 Sum_probs=95.8
Q ss_pred CCeEEEEc-CChhhHHHHHHHHhCCC-------EEEEEEeCchh--hh----hhhhCCceEE-EccCChhhHHhhccCce
Q 017914 59 PNRMLILG-MGFVGRIFAEKIKNQGW-------VVSGTCTNVMK--KK----ELEQSGFDVH-LFNANETALMILTTLKN 123 (364)
Q Consensus 59 ~~~vlVtG-tG~iG~~l~~~L~~~g~-------~V~~~~r~~~~--~~----~l~~~~~~~~-~~D~~~~~~~~~~~~d~ 123 (364)
.++|.|+| +|.||+.++..|...|. ++++++..... .. .+......+. ...+...+...++++|+
T Consensus 2 p~KV~IiGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~i~~~~~~~~~daDi 81 (322)
T cd01338 2 PVRVAVTGAAGQIGYSLLFRIASGEMFGPDQPVILQLLELPQALKALEGVAMELEDCAFPLLAEIVITDDPNVAFKDADW 81 (322)
T ss_pred CeEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEEecCCcccccceeehhhhhccccccCceEEecCcHHHhCCCCE
Confidence 36999999 59999999999998874 78889885332 11 1111100000 00112122367899999
Q ss_pred eeEEEEecCCCCCCCChhh----hHHHHHHHHhhcCC--ccEEEEEccceeecCCCCccccCCCC-CCCCChhHHHHHHH
Q 017914 124 YTHLLVSIPPLEGTGDPML----KHGELLRSTLMNGH--LQWLGYLSSTGVYGHSGGAWVDEDYP-ANPTTELGRLRLSA 196 (364)
Q Consensus 124 v~~~~~~~~~~~~~~~~~~----~~~~~l~~a~~~~~--~~r~v~~Ss~~vy~~~~~~~~~E~~~-~~~~~~Y~~sK~~~ 196 (364)
|+.+++............. ...+.+...+.+.+ -..+|.+|... +.-....-+.++ +.+...|+.+++..
T Consensus 82 vvitaG~~~k~g~tR~dll~~N~~i~~~i~~~i~~~~~~~~iiivvsNPv---D~~t~~~~k~sg~~p~~~ViG~t~LDs 158 (322)
T cd01338 82 ALLVGAKPRGPGMERADLLKANGKIFTAQGKALNDVASRDVKVLVVGNPC---NTNALIAMKNAPDIPPDNFTAMTRLDH 158 (322)
T ss_pred EEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEecCcH---HHHHHHHHHHcCCCChHheEEehHHHH
Confidence 9998876322111111111 11223333444433 22345445310 000000112232 45667899999999
Q ss_pred HHHHHHhhhhcCCcEEEEEecceecCCCC
Q 017914 197 EKGWLNLGRDLGISAQVFRLGGIYGPGRS 225 (364)
Q Consensus 197 E~~~~~~~~~~~~~~~ilRp~~v~g~~~~ 225 (364)
+++...+++..+++...+|...|||++..
T Consensus 159 ~Rl~~~la~~lgv~~~~v~~~~V~GeHG~ 187 (322)
T cd01338 159 NRAKSQLAKKAGVPVTDVKNMVIWGNHSP 187 (322)
T ss_pred HHHHHHHHHHhCcChhHeEEEEEEeCCcc
Confidence 99999999999999999998889998743
|
MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >PRK09496 trkA potassium transporter peripheral membrane component; Reviewed | Back alignment and domain information |
|---|
Probab=97.74 E-value=0.00019 Score=68.39 Aligned_cols=69 Identities=16% Similarity=0.178 Sum_probs=57.7
Q ss_pred CeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhh-CCceEEEccCChhhH--Hh-hccCceeeEEE
Q 017914 60 NRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQ-SGFDVHLFNANETAL--MI-LTTLKNYTHLL 128 (364)
Q Consensus 60 ~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~-~~~~~~~~D~~~~~~--~~-~~~~d~v~~~~ 128 (364)
|+|+|+|.|.+|+++++.|.++|++|++++++++....+.. .++.++.+|.++.+. .+ +.++|.|+.+.
T Consensus 1 m~viIiG~G~ig~~~a~~L~~~g~~v~vid~~~~~~~~~~~~~~~~~~~gd~~~~~~l~~~~~~~a~~vi~~~ 73 (453)
T PRK09496 1 MKIIIVGAGQVGYTLAENLSGENNDVTVIDTDEERLRRLQDRLDVRTVVGNGSSPDVLREAGAEDADLLIAVT 73 (453)
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHhhcCEEEEEeCCCCHHHHHHcCCCcCCEEEEec
Confidence 68999999999999999999999999999999888777654 678999999998664 22 56778776655
|
|
| >PRK14982 acyl-ACP reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.71 E-value=6.5e-05 Score=67.45 Aligned_cols=72 Identities=11% Similarity=0.022 Sum_probs=53.4
Q ss_pred CCCCCeEEEEc-CChhhHHHHHHHHhC-C-CEEEEEEeCchhhhhhhhCCceEEEccCChhhHHhhccCceeeEEEEec
Q 017914 56 WQSPNRMLILG-MGFVGRIFAEKIKNQ-G-WVVSGTCTNVMKKKELEQSGFDVHLFNANETALMILTTLKNYTHLLVSI 131 (364)
Q Consensus 56 ~~~~~~vlVtG-tG~iG~~l~~~L~~~-g-~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~~~~~~~d~v~~~~~~~ 131 (364)
...+++|+||| +|+||+.++++|.++ | .+++++.|+..+...+.. ++..+|+.+.+ ..+.++|.|+|+++..
T Consensus 152 ~l~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La~---el~~~~i~~l~-~~l~~aDiVv~~ts~~ 226 (340)
T PRK14982 152 DLSKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQELQA---ELGGGKILSLE-EALPEADIVVWVASMP 226 (340)
T ss_pred CcCCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHHH---HhccccHHhHH-HHHccCCEEEECCcCC
Confidence 35668999999 799999999999865 5 689999998776665532 22234444433 6778899999998753
|
|
| >cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases | Back alignment and domain information |
|---|
Probab=97.60 E-value=0.00018 Score=64.87 Aligned_cols=72 Identities=14% Similarity=0.009 Sum_probs=47.8
Q ss_pred CeEEEEc-CChhhHHHHHHHHhCC-------CEEEEEEeCchhhhhhhhCCce------EEEccCCh-hhH-HhhccCce
Q 017914 60 NRMLILG-MGFVGRIFAEKIKNQG-------WVVSGTCTNVMKKKELEQSGFD------VHLFNANE-TAL-MILTTLKN 123 (364)
Q Consensus 60 ~~vlVtG-tG~iG~~l~~~L~~~g-------~~V~~~~r~~~~~~~l~~~~~~------~~~~D~~~-~~~-~~~~~~d~ 123 (364)
.+|+||| +|+||++++..|...+ .+|+++++++.. +.+.....+ ....|+.. .+. +.++++|.
T Consensus 3 ~kV~I~GAaG~VG~~la~~L~~~~~~~~~~~~el~L~D~~~~~-~~~~g~~~Dl~d~~~~~~~~~~~~~~~~~~l~~aDi 81 (325)
T cd01336 3 IRVLVTGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPPAL-KALEGVVMELQDCAFPLLKSVVATTDPEEAFKDVDV 81 (325)
T ss_pred eEEEEECCCCHHHHHHHHHHHhCcccCCCCCcEEEEEEcCCcc-ccccceeeehhhccccccCCceecCCHHHHhCCCCE
Confidence 5899999 6999999999999854 589999996532 111100111 11223332 222 77899999
Q ss_pred eeEEEEecC
Q 017914 124 YTHLLVSIP 132 (364)
Q Consensus 124 v~~~~~~~~ 132 (364)
|+|+++...
T Consensus 82 VI~tAG~~~ 90 (325)
T cd01336 82 AILVGAMPR 90 (325)
T ss_pred EEEeCCcCC
Confidence 999998754
|
MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >KOG1204 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=97.59 E-value=0.00012 Score=60.48 Aligned_cols=190 Identities=13% Similarity=0.042 Sum_probs=106.2
Q ss_pred CCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEE--------EccCChhhH-Hhh--------c
Q 017914 58 SPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVH--------LFNANETAL-MIL--------T 119 (364)
Q Consensus 58 ~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~--------~~D~~~~~~-~~~--------~ 119 (364)
+.+-||||| +-.||..++..+.+.+-+.....+.....+ + .+..+. .+|++.... .++ .
T Consensus 5 ~r~villTGaSrgiG~~~v~~i~aed~e~~r~g~~r~~a~-~--~~L~v~~gd~~v~~~g~~~e~~~l~al~e~~r~k~g 81 (253)
T KOG1204|consen 5 MRKVILLTGASRGIGTGSVATILAEDDEALRYGVARLLAE-L--EGLKVAYGDDFVHVVGDITEEQLLGALREAPRKKGG 81 (253)
T ss_pred cceEEEEecCCCCccHHHHHHHHhcchHHHHHhhhccccc-c--cceEEEecCCcceechHHHHHHHHHHHHhhhhhcCC
Confidence 345688889 888999999999988765544433222221 1 233333 344444321 111 2
Q ss_pred cCceeeEEEEecCCCCCCC----C---hhhhHHHHHH----------HHhhcCC-ccEEEEEccceeecCCCCccccCCC
Q 017914 120 TLKNYTHLLVSIPPLEGTG----D---PMLKHGELLR----------STLMNGH-LQWLGYLSSTGVYGHSGGAWVDEDY 181 (364)
Q Consensus 120 ~~d~v~~~~~~~~~~~~~~----~---~~~~~~~~l~----------~a~~~~~-~~r~v~~Ss~~vy~~~~~~~~~E~~ 181 (364)
+.|.|+|.++...+..... + ....+..|+. ..++... .+-+|++||...- .
T Consensus 82 kr~iiI~NAG~lgdvsk~~~~~~D~~qw~ky~~~NlfS~VsL~~~~l~~lk~~p~~~~vVnvSS~aav-----------~ 150 (253)
T KOG1204|consen 82 KRDIIIHNAGSLGDVSKGAVDLGDSDQWKKYWDLNLFSMVSLVQWALPKLKKSPVNGNVVNVSSLAAV-----------R 150 (253)
T ss_pred ceeEEEecCCCccchhhccCCcccHHHHHHHHHhhhhhHHhhHHHHHHHhcCCCccCeEEEecchhhh-----------c
Confidence 4689999998877643211 1 1111222222 2222332 4678999886432 2
Q ss_pred CCCCCChhHHHHHHHHHHHHHhhhhc--CCcEEEEEecceecCCCChHHHHHHhcC-c-----ccccccccCCccccccc
Q 017914 182 PANPTTELGRLRLSAEKGWLNLGRDL--GISAQVFRLGGIYGPGRSSVDTIIKQLP-L-----SEGQKMRRARQYTSRIH 253 (364)
Q Consensus 182 ~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~ilRp~~v~g~~~~~~~~~~~~~~-~-----~~~~~~~~~~~~~~~i~ 253 (364)
|+.....|+.+|++.+.+.+..+.+. ++.+..++||.+-..-+.- .+... + .....+ .+.-..+.
T Consensus 151 p~~~wa~yc~~KaAr~m~f~~lA~EEp~~v~vl~~aPGvvDT~mq~~----ir~~~~~~p~~l~~f~el---~~~~~ll~ 223 (253)
T KOG1204|consen 151 PFSSWAAYCSSKAARNMYFMVLASEEPFDVRVLNYAPGVVDTQMQVC----IRETSRMTPADLKMFKEL---KESGQLLD 223 (253)
T ss_pred cccHHHHhhhhHHHHHHHHHHHhhcCccceeEEEccCCcccchhHHH----HhhccCCCHHHHHHHHHH---HhcCCcCC
Confidence 23344679999999999999987443 7888889998764332111 11100 0 000000 11122377
Q ss_pred HHHHHHHHHHHccCC
Q 017914 254 VDDICQVLSASIDKP 268 (364)
Q Consensus 254 v~Dva~~~~~~l~~~ 268 (364)
..+.|+.+..++++.
T Consensus 224 ~~~~a~~l~~L~e~~ 238 (253)
T KOG1204|consen 224 PQVTAKVLAKLLEKG 238 (253)
T ss_pred hhhHHHHHHHHHHhc
Confidence 888899888888776
|
|
| >PRK09496 trkA potassium transporter peripheral membrane component; Reviewed | Back alignment and domain information |
|---|
Probab=97.58 E-value=0.0005 Score=65.51 Aligned_cols=71 Identities=18% Similarity=0.272 Sum_probs=57.6
Q ss_pred CCCCeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhh--CCceEEEccCChhhH---HhhccCceeeEE
Q 017914 57 QSPNRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQ--SGFDVHLFNANETAL---MILTTLKNYTHL 127 (364)
Q Consensus 57 ~~~~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~--~~~~~~~~D~~~~~~---~~~~~~d~v~~~ 127 (364)
..+++|+|+|.|.+|+.+++.|.+.|++|++++++++....+.+ .++.++.+|.++++. ..+..++.|+-+
T Consensus 229 ~~~~~iiIiG~G~~g~~l~~~L~~~~~~v~vid~~~~~~~~~~~~~~~~~~i~gd~~~~~~L~~~~~~~a~~vi~~ 304 (453)
T PRK09496 229 KPVKRVMIVGGGNIGYYLAKLLEKEGYSVKLIERDPERAEELAEELPNTLVLHGDGTDQELLEEEGIDEADAFIAL 304 (453)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHCCCCeEEECCCCCHHHHHhcCCccCCEEEEC
Confidence 34689999999999999999999999999999999887666654 367899999998774 344667776544
|
|
| >PLN02968 Probable N-acetyl-gamma-glutamyl-phosphate reductase | Back alignment and domain information |
|---|
Probab=97.56 E-value=0.00036 Score=64.14 Aligned_cols=101 Identities=10% Similarity=0.051 Sum_probs=64.1
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhC-CCEEEEEEeCchhhhhhhhCCceEEEccCChh---hHHhhccCceeeEEEEec
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQ-GWVVSGTCTNVMKKKELEQSGFDVHLFNANET---ALMILTTLKNYTHLLVSI 131 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~---~~~~~~~~d~v~~~~~~~ 131 (364)
.++|+|.|+| ||++|+.|++.|.++ +++|..+.+.....+.+......+..+|..+. +...++++|.|+.+...
T Consensus 36 ~~~~kVaIvGATG~vG~eLlrlL~~hP~~el~~l~s~~saG~~i~~~~~~l~~~~~~~~~~~~~~~~~~~DvVf~Alp~- 114 (381)
T PLN02968 36 EEKKRIFVLGASGYTGAEVRRLLANHPDFEITVMTADRKAGQSFGSVFPHLITQDLPNLVAVKDADFSDVDAVFCCLPH- 114 (381)
T ss_pred ccccEEEEECCCChHHHHHHHHHHhCCCCeEEEEEChhhcCCCchhhCccccCccccceecCCHHHhcCCCEEEEcCCH-
Confidence 3567999999 999999999999998 68999998864433222222222233444321 11335788888876531
Q ss_pred CCCCCCCChhhhHHHHHHHHhhcCCccEEEEEccceeecC
Q 017914 132 PPLEGTGDPMLKHGELLRSTLMNGHLQWLGYLSSTGVYGH 171 (364)
Q Consensus 132 ~~~~~~~~~~~~~~~~l~~a~~~~~~~r~v~~Ss~~vy~~ 171 (364)
....++...+. .+ .++|-+|+..-+.+
T Consensus 115 -----------~~s~~i~~~~~-~g-~~VIDlSs~fRl~~ 141 (381)
T PLN02968 115 -----------GTTQEIIKALP-KD-LKIVDLSADFRLRD 141 (381)
T ss_pred -----------HHHHHHHHHHh-CC-CEEEEcCchhccCC
Confidence 13445555553 44 57999998765543
|
|
| >PRK14874 aspartate-semialdehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.54 E-value=0.00039 Score=63.15 Aligned_cols=67 Identities=13% Similarity=0.155 Sum_probs=46.0
Q ss_pred CCeEEEEc-CChhhHHHHHHHHhCCC---EEEEEEeCchhhhhhhhCCceEEEccCChhhHHhhccCceeeEEE
Q 017914 59 PNRMLILG-MGFVGRIFAEKIKNQGW---VVSGTCTNVMKKKELEQSGFDVHLFNANETALMILTTLKNYTHLL 128 (364)
Q Consensus 59 ~~~vlVtG-tG~iG~~l~~~L~~~g~---~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~~~~~~~d~v~~~~ 128 (364)
+++|+|+| ||++|+.|++.|.++|| ++..+.+.....+.+.-.+......|+.+. .+.++|.|+.+.
T Consensus 1 ~~~V~IvGAtG~vG~~l~~lL~~~~hp~~~l~~l~s~~~~g~~l~~~g~~i~v~d~~~~---~~~~vDvVf~A~ 71 (334)
T PRK14874 1 GYNVAVVGATGAVGREMLNILEERNFPVDKLRLLASARSAGKELSFKGKELKVEDLTTF---DFSGVDIALFSA 71 (334)
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCCcceEEEEEccccCCCeeeeCCceeEEeeCCHH---HHcCCCEEEECC
Confidence 47999999 99999999999999876 457787764433333222344455566543 335788888665
|
|
| >PRK06129 3-hydroxyacyl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=97.51 E-value=0.00048 Score=61.97 Aligned_cols=38 Identities=21% Similarity=0.269 Sum_probs=34.2
Q ss_pred CCeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCchhhh
Q 017914 59 PNRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMKKK 96 (364)
Q Consensus 59 ~~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~~~~ 96 (364)
+|+|.|+|+|.+|..++..|+++|++|++++|+++..+
T Consensus 2 ~~~V~VIG~G~mG~~iA~~la~~G~~V~v~d~~~~~~~ 39 (308)
T PRK06129 2 MGSVAIIGAGLIGRAWAIVFARAGHEVRLWDADPAAAA 39 (308)
T ss_pred CcEEEEECccHHHHHHHHHHHHCCCeeEEEeCCHHHHH
Confidence 36899999999999999999999999999999876544
|
|
| >PRK10669 putative cation:proton antiport protein; Provisional | Back alignment and domain information |
|---|
Probab=97.49 E-value=0.0006 Score=66.62 Aligned_cols=70 Identities=24% Similarity=0.289 Sum_probs=59.8
Q ss_pred CCeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCChhhH---HhhccCceeeEEE
Q 017914 59 PNRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETAL---MILTTLKNYTHLL 128 (364)
Q Consensus 59 ~~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~---~~~~~~d~v~~~~ 128 (364)
..+|+|.|.|-+|+++++.|.++|++|++++.++++.+.+.+.+...+.+|.+|++. ..++++|.++-..
T Consensus 417 ~~hiiI~G~G~~G~~la~~L~~~g~~vvvId~d~~~~~~~~~~g~~~i~GD~~~~~~L~~a~i~~a~~viv~~ 489 (558)
T PRK10669 417 CNHALLVGYGRVGSLLGEKLLAAGIPLVVIETSRTRVDELRERGIRAVLGNAANEEIMQLAHLDCARWLLLTI 489 (558)
T ss_pred CCCEEEECCChHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHCCCeEEEcCCCCHHHHHhcCccccCEEEEEc
Confidence 468999999999999999999999999999999998888888899999999999874 2345667655544
|
|
| >PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated | Back alignment and domain information |
|---|
Probab=97.48 E-value=0.0012 Score=59.97 Aligned_cols=103 Identities=17% Similarity=0.169 Sum_probs=68.6
Q ss_pred CCCCCeEEEEcCChhhHHHHHHHHhCCC-EEEEEEeCchhh---------------------h----hhhh--C--CceE
Q 017914 56 WQSPNRMLILGMGFVGRIFAEKIKNQGW-VVSGTCTNVMKK---------------------K----ELEQ--S--GFDV 105 (364)
Q Consensus 56 ~~~~~~vlVtGtG~iG~~l~~~L~~~g~-~V~~~~r~~~~~---------------------~----~l~~--~--~~~~ 105 (364)
.....+|+|+|.|.+|+.++..|...|. ++++++.+.-.. . .+.+ + .++.
T Consensus 21 ~L~~~~VlVvG~GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~RQ~l~~~~dig~g~~Ka~aa~~~l~~inp~v~v~~ 100 (339)
T PRK07688 21 KLREKHVLIIGAGALGTANAEMLVRAGVGKVTIVDRDYVEWSNLQRQQLYTESDVKNNLPKAVAAKKRLEEINSDVRVEA 100 (339)
T ss_pred HhcCCcEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCccCHHHcCccccccHHHhcCCCcHHHHHHHHHHHHCCCcEEEE
Confidence 3456799999999999999999999997 888888753111 0 1111 2 2445
Q ss_pred EEccCChhhH-HhhccCceeeEEEEecCCCCCCCChhhhHHHHHHHHhhcCCccEEEEEccceeec
Q 017914 106 HLFNANETAL-MILTTLKNYTHLLVSIPPLEGTGDPMLKHGELLRSTLMNGHLQWLGYLSSTGVYG 170 (364)
Q Consensus 106 ~~~D~~~~~~-~~~~~~d~v~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~r~v~~Ss~~vy~ 170 (364)
+..+++..+. ..+.++|.|+.+.. +. .....+-+++...++ .+|+.++.+.||
T Consensus 101 ~~~~~~~~~~~~~~~~~DlVid~~D---------n~--~~r~~ln~~~~~~~i-P~i~~~~~g~~G 154 (339)
T PRK07688 101 IVQDVTAEELEELVTGVDLIIDATD---------NF--ETRFIVNDAAQKYGI-PWIYGACVGSYG 154 (339)
T ss_pred EeccCCHHHHHHHHcCCCEEEEcCC---------CH--HHHHHHHHHHHHhCC-CEEEEeeeeeee
Confidence 5667765554 56778888888752 22 223456666767665 488888777665
|
|
| >PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional | Back alignment and domain information |
|---|
Probab=97.45 E-value=0.0012 Score=59.81 Aligned_cols=103 Identities=16% Similarity=0.155 Sum_probs=67.2
Q ss_pred CCCCCeEEEEcCChhhHHHHHHHHhCCC-EEEEEEeCchh---------------------hh----hhhh--C--CceE
Q 017914 56 WQSPNRMLILGMGFVGRIFAEKIKNQGW-VVSGTCTNVMK---------------------KK----ELEQ--S--GFDV 105 (364)
Q Consensus 56 ~~~~~~vlVtGtG~iG~~l~~~L~~~g~-~V~~~~r~~~~---------------------~~----~l~~--~--~~~~ 105 (364)
....++|+|+|.|.+|+++++.|...|. ++++++++.-. .. .+.+ + .++.
T Consensus 21 ~L~~~~VlIiG~GglGs~va~~La~aGvg~i~lvD~D~ve~sNL~RQ~l~~~~d~~~g~~Ka~aa~~~l~~inp~v~i~~ 100 (338)
T PRK12475 21 KIREKHVLIVGAGALGAANAEALVRAGIGKLTIADRDYVEWSNLQRQQLYTEEDAKQKKPKAIAAKEHLRKINSEVEIVP 100 (338)
T ss_pred hhcCCcEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCcccccccCccccccHHHccCCccHHHHHHHHHHHHCCCcEEEE
Confidence 3456799999999999999999999997 78888875311 10 1111 2 3455
Q ss_pred EEccCChhhH-HhhccCceeeEEEEecCCCCCCCChhhhHHHHHHHHhhcCCccEEEEEccceeec
Q 017914 106 HLFNANETAL-MILTTLKNYTHLLVSIPPLEGTGDPMLKHGELLRSTLMNGHLQWLGYLSSTGVYG 170 (364)
Q Consensus 106 ~~~D~~~~~~-~~~~~~d~v~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~r~v~~Ss~~vy~ 170 (364)
+..|++..+. ..+.++|.|+.+.. +. .....+-+.+...+++ +|+.+..+.+|
T Consensus 101 ~~~~~~~~~~~~~~~~~DlVid~~D---------~~--~~r~~in~~~~~~~ip-~i~~~~~g~~G 154 (338)
T PRK12475 101 VVTDVTVEELEELVKEVDLIIDATD---------NF--DTRLLINDLSQKYNIP-WIYGGCVGSYG 154 (338)
T ss_pred EeccCCHHHHHHHhcCCCEEEEcCC---------CH--HHHHHHHHHHHHcCCC-EEEEEecccEE
Confidence 6667765444 56688898887752 11 2223455566666665 78887666555
|
|
| >PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1 | Back alignment and domain information |
|---|
Probab=97.43 E-value=0.00034 Score=56.60 Aligned_cols=65 Identities=17% Similarity=0.235 Sum_probs=49.0
Q ss_pred CCeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCChhhHHhhccCceeeEEE
Q 017914 59 PNRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETALMILTTLKNYTHLL 128 (364)
Q Consensus 59 ~~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~~~~~~~d~v~~~~ 128 (364)
||+|-++|.|-+|+.+++.|+++||+|++.+|++++.+.+.+.+++.. | ++. +..+.+|+|+-+.
T Consensus 1 m~~Ig~IGlG~mG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~g~~~~--~--s~~-e~~~~~dvvi~~v 65 (163)
T PF03446_consen 1 MMKIGFIGLGNMGSAMARNLAKAGYEVTVYDRSPEKAEALAEAGAEVA--D--SPA-EAAEQADVVILCV 65 (163)
T ss_dssp -BEEEEE--SHHHHHHHHHHHHTTTEEEEEESSHHHHHHHHHTTEEEE--S--SHH-HHHHHBSEEEE-S
T ss_pred CCEEEEEchHHHHHHHHHHHHhcCCeEEeeccchhhhhhhHHhhhhhh--h--hhh-hHhhcccceEeec
Confidence 589999999999999999999999999999999988888776664332 1 122 5667778888776
|
1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A .... |
| >PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional | Back alignment and domain information |
|---|
Probab=97.41 E-value=0.00092 Score=65.70 Aligned_cols=70 Identities=11% Similarity=0.170 Sum_probs=60.9
Q ss_pred CCeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCChhhH---HhhccCceeeEEE
Q 017914 59 PNRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETAL---MILTTLKNYTHLL 128 (364)
Q Consensus 59 ~~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~---~~~~~~d~v~~~~ 128 (364)
.++|+|.|.|-+|+.+++.|.++|+++++++.+++..+.+.+.+..++.||.++++. ..+++++.++-+.
T Consensus 400 ~~~vII~G~Gr~G~~va~~L~~~g~~vvvID~d~~~v~~~~~~g~~v~~GDat~~~~L~~agi~~A~~vv~~~ 472 (601)
T PRK03659 400 KPQVIIVGFGRFGQVIGRLLMANKMRITVLERDISAVNLMRKYGYKVYYGDATQLELLRAAGAEKAEAIVITC 472 (601)
T ss_pred cCCEEEecCchHHHHHHHHHHhCCCCEEEEECCHHHHHHHHhCCCeEEEeeCCCHHHHHhcCCccCCEEEEEe
Confidence 468999999999999999999999999999999998888888899999999999885 3346677776665
|
|
| >COG2085 Predicted dinucleotide-binding enzymes [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.39 E-value=0.0011 Score=54.75 Aligned_cols=66 Identities=14% Similarity=-0.004 Sum_probs=44.7
Q ss_pred CCeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCchhhh-hhhh-CCceEEEccCChhhHHhhccCceeeEEE
Q 017914 59 PNRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMKKK-ELEQ-SGFDVHLFNANETALMILTTLKNYTHLL 128 (364)
Q Consensus 59 ~~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~l~~-~~~~~~~~D~~~~~~~~~~~~d~v~~~~ 128 (364)
||++.|.|+|.||..|+++|.+.||+|+..+|+.++.. ...+ .+..+.-+. ...+.+..|+|+-.+
T Consensus 1 m~~~~i~GtGniG~alA~~~a~ag~eV~igs~r~~~~~~a~a~~l~~~i~~~~----~~dA~~~aDVVvLAV 68 (211)
T COG2085 1 MMIIAIIGTGNIGSALALRLAKAGHEVIIGSSRGPKALAAAAAALGPLITGGS----NEDAAALADVVVLAV 68 (211)
T ss_pred CcEEEEeccChHHHHHHHHHHhCCCeEEEecCCChhHHHHHHHhhccccccCC----hHHHHhcCCEEEEec
Confidence 58899999999999999999999999999976554432 2211 111111111 114667788888765
|
|
| >PRK12548 shikimate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.36 E-value=0.00074 Score=60.02 Aligned_cols=72 Identities=8% Similarity=0.095 Sum_probs=50.1
Q ss_pred CCCCeEEEEcCChhhHHHHHHHHhCCCE-EEEEEeCc---hhhhhhhh------CCceEEEccCChhhH--HhhccCcee
Q 017914 57 QSPNRMLILGMGFVGRIFAEKIKNQGWV-VSGTCTNV---MKKKELEQ------SGFDVHLFNANETAL--MILTTLKNY 124 (364)
Q Consensus 57 ~~~~~vlVtGtG~iG~~l~~~L~~~g~~-V~~~~r~~---~~~~~l~~------~~~~~~~~D~~~~~~--~~~~~~d~v 124 (364)
..+++++|+|+|.+|++++..|.+.|++ |++++|+. ++.+.+.+ ..+.+...|+.+.+. ..+..+|.|
T Consensus 124 ~~~k~vlI~GAGGagrAia~~La~~G~~~V~I~~R~~~~~~~a~~l~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~Dil 203 (289)
T PRK12548 124 VKGKKLTVIGAGGAATAIQVQCALDGAKEITIFNIKDDFYERAEQTAEKIKQEVPECIVNVYDLNDTEKLKAEIASSDIL 203 (289)
T ss_pred cCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCchHHHHHHHHHHHHhhcCCCceeEEechhhhhHHHhhhccCCEE
Confidence 3457899999999999999999999985 99999986 44433321 123455567766432 344566777
Q ss_pred eEEE
Q 017914 125 THLL 128 (364)
Q Consensus 125 ~~~~ 128 (364)
+++.
T Consensus 204 INaT 207 (289)
T PRK12548 204 VNAT 207 (289)
T ss_pred EEeC
Confidence 7644
|
|
| >PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional | Back alignment and domain information |
|---|
Probab=97.35 E-value=0.0011 Score=65.31 Aligned_cols=70 Identities=17% Similarity=0.204 Sum_probs=60.9
Q ss_pred CCeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCChhhH---HhhccCceeeEEE
Q 017914 59 PNRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETAL---MILTTLKNYTHLL 128 (364)
Q Consensus 59 ~~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~---~~~~~~d~v~~~~ 128 (364)
.++|+|.|.|-+|+.+++.|.++|+++++++.++++.+.+.+.+..++.+|.++++. ..+++++.++.+.
T Consensus 400 ~~~vII~G~Gr~G~~va~~L~~~g~~vvvID~d~~~v~~~~~~g~~v~~GDat~~~~L~~agi~~A~~vvv~~ 472 (621)
T PRK03562 400 QPRVIIAGFGRFGQIVGRLLLSSGVKMTVLDHDPDHIETLRKFGMKVFYGDATRMDLLESAGAAKAEVLINAI 472 (621)
T ss_pred cCcEEEEecChHHHHHHHHHHhCCCCEEEEECCHHHHHHHHhcCCeEEEEeCCCHHHHHhcCCCcCCEEEEEe
Confidence 478999999999999999999999999999999999888888899999999999885 3345677766655
|
|
| >PF03721 UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; InterPro: IPR001732 The UDP-glucose/GDP-mannose dehydrogenases are a small group of enzymes which possesses the ability to catalyse the NAD-dependent 2-fold oxidation of an alcohol to an acid without the release of an aldehyde intermediate [, ] | Back alignment and domain information |
|---|
Probab=97.34 E-value=0.0008 Score=55.48 Aligned_cols=72 Identities=17% Similarity=0.244 Sum_probs=42.9
Q ss_pred CeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCCh--------------hhH-HhhccCcee
Q 017914 60 NRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANE--------------TAL-MILTTLKNY 124 (364)
Q Consensus 60 ~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~--------------~~~-~~~~~~d~v 124 (364)
|+|.|+|.|++|-.++..|.+.||+|++++.+++..+.+.+....+..-.+.+ .+. .++..+|++
T Consensus 1 M~I~ViGlGyvGl~~A~~lA~~G~~V~g~D~~~~~v~~l~~g~~p~~E~~l~~ll~~~~~~~~l~~t~~~~~ai~~adv~ 80 (185)
T PF03721_consen 1 MKIAVIGLGYVGLPLAAALAEKGHQVIGVDIDEEKVEALNNGELPIYEPGLDELLKENVSAGRLRATTDIEEAIKDADVV 80 (185)
T ss_dssp -EEEEE--STTHHHHHHHHHHTTSEEEEE-S-HHHHHHHHTTSSSS-CTTHHHHHHHHHHTTSEEEESEHHHHHHH-SEE
T ss_pred CEEEEECCCcchHHHHHHHHhCCCEEEEEeCChHHHHHHhhccccccccchhhhhccccccccchhhhhhhhhhhccceE
Confidence 79999999999999999999999999999999887776654322222211111 011 345678888
Q ss_pred eEEEEec
Q 017914 125 THLLVSI 131 (364)
Q Consensus 125 ~~~~~~~ 131 (364)
+.++...
T Consensus 81 ~I~VpTP 87 (185)
T PF03721_consen 81 FICVPTP 87 (185)
T ss_dssp EE----E
T ss_pred EEecCCC
Confidence 8887653
|
The enzymes have a wide range of functions. In plants UDP-glucose dehydrogenase, 1.1.1.22 from EC, is an important enzyme in the synthesis of hemicellulose and pectin [], which are the components of newly formed cell walls; while in zebrafish UDP-glucose dehydrogenase is required for cardiac valve formation []. In Xanthomonas campestris, a plant pathogen, UDP-glucose dehydrogenase is required for virulence []. GDP-mannose dehydrogenase, 1.1.1.132 from EC, catalyses the formation of GDP-mannuronic acid, which is the monomeric unit from which the exopolysaccharide alginate is formed. Alginate is secreted by a number of bacteria, which include Pseudomonas aeruginosa and Azotobacter vinelandii. In P. aeruginosa, alginate is believed to play an important role in the bacteria's resistance to antibiotics and the host immune response [], while in A. vinelandii it is essential for the encystment process []. This entry represents the N-terminal NAD(+)-binding domain. Structural studies indicate that this domain forms an alpha-beta structure containing the six-stranded parallel beta sheet characteristic of the dinucleotide binding Rossman fold [, ].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0055114 oxidation-reduction process; PDB: 3OJO_A 3OJL_A 1MV8_B 1MUU_A 1MFZ_C 3GG2_D 1DLJ_A 1DLI_A 3G79_B 2Y0E_D .... |
| >PRK05086 malate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.32 E-value=0.0014 Score=58.76 Aligned_cols=105 Identities=11% Similarity=-0.102 Sum_probs=64.9
Q ss_pred CeEEEEc-CChhhHHHHHHHHh---CCCEEEEEEeCchhh---hhhhhCC-ceEEEccCChhh-HHhhccCceeeEEEEe
Q 017914 60 NRMLILG-MGFVGRIFAEKIKN---QGWVVSGTCTNVMKK---KELEQSG-FDVHLFNANETA-LMILTTLKNYTHLLVS 130 (364)
Q Consensus 60 ~~vlVtG-tG~iG~~l~~~L~~---~g~~V~~~~r~~~~~---~~l~~~~-~~~~~~D~~~~~-~~~~~~~d~v~~~~~~ 130 (364)
|+|+|+| +|.+|++++..|.. .++++++++|++... -.+.... ...+.+ ....+ ...++++|.|+.+++.
T Consensus 1 ~KI~IIGAsG~VG~aia~~l~~~~~~~~el~L~d~~~~~~g~alDl~~~~~~~~i~~-~~~~d~~~~l~~~DiVIitaG~ 79 (312)
T PRK05086 1 MKVAVLGAAGGIGQALALLLKTQLPAGSELSLYDIAPVTPGVAVDLSHIPTAVKIKG-FSGEDPTPALEGADVVLISAGV 79 (312)
T ss_pred CEEEEECCCCHHHHHHHHHHHcCCCCccEEEEEecCCCCcceehhhhcCCCCceEEE-eCCCCHHHHcCCCCEEEEcCCC
Confidence 6899999 79999999988854 256888888874321 1222211 122333 11112 2677889999999876
Q ss_pred cCCCCCC-CChhh---hHHHHHHHHhhcCCccEEEEEcc
Q 017914 131 IPPLEGT-GDPML---KHGELLRSTLMNGHLQWLGYLSS 165 (364)
Q Consensus 131 ~~~~~~~-~~~~~---~~~~~l~~a~~~~~~~r~v~~Ss 165 (364)
....... .+... ....++..++++.+.+++|.+.|
T Consensus 80 ~~~~~~~R~dll~~N~~i~~~ii~~i~~~~~~~ivivvs 118 (312)
T PRK05086 80 ARKPGMDRSDLFNVNAGIVKNLVEKVAKTCPKACIGIIT 118 (312)
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEcc
Confidence 4332211 11111 24456777788888888888876
|
|
| >PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related | Back alignment and domain information |
|---|
Probab=97.30 E-value=0.0017 Score=53.31 Aligned_cols=69 Identities=19% Similarity=0.200 Sum_probs=47.3
Q ss_pred CCCCCeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCChhhHHhhccCceeeEEEEe
Q 017914 56 WQSPNRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETALMILTTLKNYTHLLVS 130 (364)
Q Consensus 56 ~~~~~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~~~~~~~d~v~~~~~~ 130 (364)
...+++|.|+|.|-||+.+++.|..-|.+|++.+|...........++.+ .++ + +.+..+|+|+.....
T Consensus 33 ~l~g~tvgIiG~G~IG~~vA~~l~~fG~~V~~~d~~~~~~~~~~~~~~~~--~~l---~-ell~~aDiv~~~~pl 101 (178)
T PF02826_consen 33 ELRGKTVGIIGYGRIGRAVARRLKAFGMRVIGYDRSPKPEEGADEFGVEY--VSL---D-ELLAQADIVSLHLPL 101 (178)
T ss_dssp -STTSEEEEESTSHHHHHHHHHHHHTT-EEEEEESSCHHHHHHHHTTEEE--SSH---H-HHHHH-SEEEE-SSS
T ss_pred ccCCCEEEEEEEcCCcCeEeeeeecCCceeEEecccCChhhhccccccee--eeh---h-hhcchhhhhhhhhcc
Confidence 45678999999999999999999999999999999877654222223211 121 1 566778887776644
|
All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A .... |
| >COG1004 Ugd Predicted UDP-glucose 6-dehydrogenase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=97.29 E-value=0.0019 Score=58.27 Aligned_cols=73 Identities=15% Similarity=0.122 Sum_probs=51.8
Q ss_pred CeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCCh--------------hhH-HhhccCcee
Q 017914 60 NRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANE--------------TAL-MILTTLKNY 124 (364)
Q Consensus 60 ~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~--------------~~~-~~~~~~d~v 124 (364)
|+|.|+|+|++|-.....|.+.||+|++++.++.+.+.+.+....++.=-+.+ .+. .+++..|++
T Consensus 1 MkI~viGtGYVGLv~g~~lA~~GHeVv~vDid~~KV~~ln~g~~PI~EpgLe~ll~~~~~~gRl~fTtd~~~a~~~adv~ 80 (414)
T COG1004 1 MKITVIGTGYVGLVTGACLAELGHEVVCVDIDESKVELLNKGISPIYEPGLEELLKENLASGRLRFTTDYEEAVKDADVV 80 (414)
T ss_pred CceEEECCchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHhCCCCCCcCccHHHHHHhccccCcEEEEcCHHHHHhcCCEE
Confidence 78999999999999999999999999999999888777654222222211110 011 456778888
Q ss_pred eEEEEecC
Q 017914 125 THLLVSIP 132 (364)
Q Consensus 125 ~~~~~~~~ 132 (364)
+.+.+...
T Consensus 81 fIavgTP~ 88 (414)
T COG1004 81 FIAVGTPP 88 (414)
T ss_pred EEEcCCCC
Confidence 87776533
|
|
| >PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP | Back alignment and domain information |
|---|
Probab=97.27 E-value=0.003 Score=49.27 Aligned_cols=100 Identities=18% Similarity=0.220 Sum_probs=63.9
Q ss_pred CCeEEEEcCChhhHHHHHHHHhCCC-EEEEEEeCchhhhh-----------------------hhh----CCceEEEccC
Q 017914 59 PNRMLILGMGFVGRIFAEKIKNQGW-VVSGTCTNVMKKKE-----------------------LEQ----SGFDVHLFNA 110 (364)
Q Consensus 59 ~~~vlVtGtG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~-----------------------l~~----~~~~~~~~D~ 110 (364)
.++|+|+|.|.+|+.++..|...|. +++.++...-.... +.+ ..++.+..++
T Consensus 2 ~~~v~iiG~G~vGs~va~~L~~~Gv~~i~lvD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~np~~~v~~~~~~~ 81 (135)
T PF00899_consen 2 NKRVLIIGAGGVGSEVAKNLARSGVGKITLVDDDIVEPSNLNRQFLYTEEDVGKNKAEAAKERLQEINPDVEVEAIPEKI 81 (135)
T ss_dssp T-EEEEESTSHHHHHHHHHHHHHTTSEEEEEESSBB-GGGCCTCTTS-GGGTTSBHHHHHHHHHHHHSTTSEEEEEESHC
T ss_pred CCEEEEECcCHHHHHHHHHHHHhCCCceeecCCcceeecccccccccccccchhHHHHHHHHHHHHhcCceeeeeeeccc
Confidence 3689999999999999999999997 78888764311111 000 2345566677
Q ss_pred ChhhH-HhhccCceeeEEEEecCCCCCCCChhhhHHHHHHHHhhcCCccEEEEEccceeec
Q 017914 111 NETAL-MILTTLKNYTHLLVSIPPLEGTGDPMLKHGELLRSTLMNGHLQWLGYLSSTGVYG 170 (364)
Q Consensus 111 ~~~~~-~~~~~~d~v~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~r~v~~Ss~~vy~ 170 (364)
+..+. ..++++|.|+.+.. + ......+.+.++..+. .+|+.+..+.+|
T Consensus 82 ~~~~~~~~~~~~d~vi~~~d---------~--~~~~~~l~~~~~~~~~-p~i~~~~~g~~G 130 (135)
T PF00899_consen 82 DEENIEELLKDYDIVIDCVD---------S--LAARLLLNEICREYGI-PFIDAGVNGFYG 130 (135)
T ss_dssp SHHHHHHHHHTSSEEEEESS---------S--HHHHHHHHHHHHHTT--EEEEEEEETTEE
T ss_pred ccccccccccCCCEEEEecC---------C--HHHHHHHHHHHHHcCC-CEEEEEeecCEE
Confidence 55444 56678998888652 2 2233456667777765 588777655443
|
Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A .... |
| >PRK11064 wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.21 E-value=0.0024 Score=59.80 Aligned_cols=45 Identities=16% Similarity=0.265 Sum_probs=39.3
Q ss_pred CCeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCc
Q 017914 59 PNRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGF 103 (364)
Q Consensus 59 ~~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~ 103 (364)
+|+|.|+|.|++|..++..|.++||+|+++++++++.+.+.....
T Consensus 3 ~~kI~VIGlG~~G~~~A~~La~~G~~V~~~D~~~~~v~~l~~g~~ 47 (415)
T PRK11064 3 FETISVIGLGYIGLPTAAAFASRQKQVIGVDINQHAVDTINRGEI 47 (415)
T ss_pred ccEEEEECcchhhHHHHHHHHhCCCEEEEEeCCHHHHHHHHCCCC
Confidence 479999999999999999999999999999999888776654333
|
|
| >PRK05671 aspartate-semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=97.19 E-value=0.0015 Score=59.03 Aligned_cols=93 Identities=11% Similarity=0.088 Sum_probs=53.0
Q ss_pred CCCeEEEEc-CChhhHHHHHHHHhCCCEE---EEEEeCchhhh-hhhhCCceEEEccCChhhHHhhccCceeeEEEEecC
Q 017914 58 SPNRMLILG-MGFVGRIFAEKIKNQGWVV---SGTCTNVMKKK-ELEQSGFDVHLFNANETALMILTTLKNYTHLLVSIP 132 (364)
Q Consensus 58 ~~~~vlVtG-tG~iG~~l~~~L~~~g~~V---~~~~r~~~~~~-~l~~~~~~~~~~D~~~~~~~~~~~~d~v~~~~~~~~ 132 (364)
+|++|.|+| ||++|+.|++.|.+++|.+ ..+ ++.+... .+.-.+ ...++.+.+...++++|.|+.+..
T Consensus 3 ~~~~IaIvGATG~vG~eLlrlL~~~~hP~~~l~~v-~s~~~aG~~l~~~~---~~l~~~~~~~~~~~~vD~vFla~p--- 75 (336)
T PRK05671 3 QPLDIAVVGATGTVGEALVQILEERDFPVGTLHLL-ASSESAGHSVPFAG---KNLRVREVDSFDFSQVQLAFFAAG--- 75 (336)
T ss_pred CCCEEEEEccCCHHHHHHHHHHhhCCCCceEEEEE-ECcccCCCeeccCC---cceEEeeCChHHhcCCCEEEEcCC---
Confidence 347999999 9999999999999877643 333 3322221 111122 223333333223577887777552
Q ss_pred CCCCCCChhhhHHHHHHHHhhcCCccEEEEEccce
Q 017914 133 PLEGTGDPMLKHGELLRSTLMNGHLQWLGYLSSTG 167 (364)
Q Consensus 133 ~~~~~~~~~~~~~~~l~~a~~~~~~~r~v~~Ss~~ 167 (364)
. .....+...+.+.|++ +|=.|+..
T Consensus 76 --------~-~~s~~~v~~~~~~G~~-VIDlS~~f 100 (336)
T PRK05671 76 --------A-AVSRSFAEKARAAGCS-VIDLSGAL 100 (336)
T ss_pred --------H-HHHHHHHHHHHHCCCe-EEECchhh
Confidence 1 1223355555556654 66667654
|
|
| >PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated | Back alignment and domain information |
|---|
Probab=97.18 E-value=0.001 Score=61.52 Aligned_cols=71 Identities=18% Similarity=0.169 Sum_probs=52.2
Q ss_pred CCCCeEEEE-c----------------CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCChhhH----
Q 017914 57 QSPNRMLIL-G----------------MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETAL---- 115 (364)
Q Consensus 57 ~~~~~vlVt-G----------------tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~---- 115 (364)
..+++|||| | +|.+|.+++++|.++|++|++++++.. .. . ..+ +...|+++.+.
T Consensus 186 l~gk~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~Ga~V~~v~~~~~-~~-~-~~~--~~~~dv~~~~~~~~~ 260 (399)
T PRK05579 186 LAGKRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARRGADVTLVSGPVN-LP-T-PAG--VKRIDVESAQEMLDA 260 (399)
T ss_pred cCCCEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHHCCCEEEEeCCCcc-cc-C-CCC--cEEEccCCHHHHHHH
Confidence 567899999 6 589999999999999999999998653 11 1 122 34568887542
Q ss_pred --HhhccCceeeEEEEecC
Q 017914 116 --MILTTLKNYTHLLVSIP 132 (364)
Q Consensus 116 --~~~~~~d~v~~~~~~~~ 132 (364)
..+..+|+++|+|+...
T Consensus 261 v~~~~~~~DilI~~Aav~d 279 (399)
T PRK05579 261 VLAALPQADIFIMAAAVAD 279 (399)
T ss_pred HHHhcCCCCEEEEcccccc
Confidence 22356899999998643
|
|
| >PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain | Back alignment and domain information |
|---|
Probab=97.18 E-value=0.00098 Score=48.53 Aligned_cols=64 Identities=17% Similarity=0.142 Sum_probs=47.6
Q ss_pred eEEEEcCChhhHHHHHHHHhCC---CEEEEE-EeCchhhhhhhh-CCceEEEccCChhhHHhhccCceeeEEE
Q 017914 61 RMLILGMGFVGRIFAEKIKNQG---WVVSGT-CTNVMKKKELEQ-SGFDVHLFNANETALMILTTLKNYTHLL 128 (364)
Q Consensus 61 ~vlVtGtG~iG~~l~~~L~~~g---~~V~~~-~r~~~~~~~l~~-~~~~~~~~D~~~~~~~~~~~~d~v~~~~ 128 (364)
||.|+|+|.+|.+|++.|.+.| ++|... +|++++...+.+ .++.+...|. .+.++..|.|+.+.
T Consensus 1 kI~iIG~G~mg~al~~~l~~~g~~~~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~----~~~~~~advvilav 69 (96)
T PF03807_consen 1 KIGIIGAGNMGSALARGLLASGIKPHEVIIVSSRSPEKAAELAKEYGVQATADDN----EEAAQEADVVILAV 69 (96)
T ss_dssp EEEEESTSHHHHHHHHHHHHTTS-GGEEEEEEESSHHHHHHHHHHCTTEEESEEH----HHHHHHTSEEEE-S
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCceeEEeeccCcHHHHHHHHHhhccccccCCh----HHhhccCCEEEEEE
Confidence 5788899999999999999999 999955 999888777643 3433333221 25667889888876
|
It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D .... |
| >TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E | Back alignment and domain information |
|---|
Probab=97.16 E-value=0.0036 Score=52.51 Aligned_cols=103 Identities=14% Similarity=0.065 Sum_probs=64.1
Q ss_pred CCCCCeEEEEcCChhhHHHHHHHHhCCC-EEEEEEeCchhhhh-----------------------hhh--CCc--eEEE
Q 017914 56 WQSPNRMLILGMGFVGRIFAEKIKNQGW-VVSGTCTNVMKKKE-----------------------LEQ--SGF--DVHL 107 (364)
Q Consensus 56 ~~~~~~vlVtGtG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~-----------------------l~~--~~~--~~~~ 107 (364)
.....+|+|+|.|.+|+.+++.|...|. ++++++.+.-.... +.+ +.+ +.+.
T Consensus 18 kl~~~~VlviG~GglGs~ia~~La~~Gv~~i~lvD~d~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~i~~~~ 97 (202)
T TIGR02356 18 RLLNSHVLIIGAGGLGSPAALYLAGAGVGTIVIVDDDHVDLSNLQRQILFTEEDVGRPKVEVAAQRLRELNSDIQVTALK 97 (202)
T ss_pred HhcCCCEEEECCCHHHHHHHHHHHHcCCCeEEEecCCEEcccchhhhhccChhhCCChHHHHHHHHHHHhCCCCEEEEeh
Confidence 3456799999999999999999999996 78888875311111 111 222 3333
Q ss_pred ccCChhhH-HhhccCceeeEEEEecCCCCCCCChhhhHHHHHHHHhhcCCccEEEEEccceeec
Q 017914 108 FNANETAL-MILTTLKNYTHLLVSIPPLEGTGDPMLKHGELLRSTLMNGHLQWLGYLSSTGVYG 170 (364)
Q Consensus 108 ~D~~~~~~-~~~~~~d~v~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~r~v~~Ss~~vy~ 170 (364)
.++...+. ..+.++|.|+.+... . .....+.+.+...++ .+|+.+..+.+|
T Consensus 98 ~~i~~~~~~~~~~~~D~Vi~~~d~---------~--~~r~~l~~~~~~~~i-p~i~~~~~g~~G 149 (202)
T TIGR02356 98 ERVTAENLELLINNVDLVLDCTDN---------F--ATRYLINDACVALGT-PLISAAVVGFGG 149 (202)
T ss_pred hcCCHHHHHHHHhCCCEEEECCCC---------H--HHHHHHHHHHHHcCC-CEEEEEeccCeE
Confidence 44444333 456788888776521 1 223345666777765 488877655554
|
coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli. |
| >PRK08223 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=97.15 E-value=0.0038 Score=54.71 Aligned_cols=102 Identities=14% Similarity=0.102 Sum_probs=62.4
Q ss_pred CCCCCeEEEEcCChhhHHHHHHHHhCCC-EEEEEEeCchhhhhh-----------------------hh--C--CceEEE
Q 017914 56 WQSPNRMLILGMGFVGRIFAEKIKNQGW-VVSGTCTNVMKKKEL-----------------------EQ--S--GFDVHL 107 (364)
Q Consensus 56 ~~~~~~vlVtGtG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~l-----------------------~~--~--~~~~~~ 107 (364)
.....+|+|+|.|.+|+.++..|...|. ++++++.+.-....+ .+ + .++.+.
T Consensus 24 kL~~s~VlIvG~GGLGs~va~~LA~aGVG~i~lvD~D~Ve~SNLnRQ~l~~~~diG~~Kve~a~~~l~~iNP~v~V~~~~ 103 (287)
T PRK08223 24 RLRNSRVAIAGLGGVGGIHLLTLARLGIGKFTIADFDVFELRNFNRQAGAMMSTLGRPKAEVLAEMVRDINPELEIRAFP 103 (287)
T ss_pred HHhcCCEEEECCCHHHHHHHHHHHHhCCCeEEEEeCCCcchhccccccCcChhHCCCcHHHHHHHHHHHHCCCCEEEEEe
Confidence 3456799999999999999999999995 566666532111111 10 2 344455
Q ss_pred ccCChhhH-HhhccCceeeEEEEecCCCCCCCChhhhHHHHHHHHhhcCCccEEEEEccce
Q 017914 108 FNANETAL-MILTTLKNYTHLLVSIPPLEGTGDPMLKHGELLRSTLMNGHLQWLGYLSSTG 167 (364)
Q Consensus 108 ~D~~~~~~-~~~~~~d~v~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~r~v~~Ss~~ 167 (364)
..++..+. +.+.++|.|+.+. ++........+-++|...++. +|+.|..+
T Consensus 104 ~~l~~~n~~~ll~~~DlVvD~~---------D~~~~~~r~~ln~~c~~~~iP-~V~~~~~g 154 (287)
T PRK08223 104 EGIGKENADAFLDGVDVYVDGL---------DFFEFDARRLVFAACQQRGIP-ALTAAPLG 154 (287)
T ss_pred cccCccCHHHHHhCCCEEEECC---------CCCcHHHHHHHHHHHHHcCCC-EEEEeccC
Confidence 55555443 5677888887543 111123345566777777764 77765433
|
|
| >COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.11 E-value=0.005 Score=55.13 Aligned_cols=94 Identities=14% Similarity=0.067 Sum_probs=67.6
Q ss_pred CCCCeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCChhhH-Hhh-ccCceeeEEEEecCCC
Q 017914 57 QSPNRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETAL-MIL-TTLKNYTHLLVSIPPL 134 (364)
Q Consensus 57 ~~~~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~-~~~-~~~d~v~~~~~~~~~~ 134 (364)
..+.+|+|+|.|.+|..-++.+...|.+|++++|++++.+...+.+.+.+...- |++. +.+ +.+|.++.++.
T Consensus 165 ~pG~~V~I~G~GGlGh~avQ~Aka~ga~Via~~~~~~K~e~a~~lGAd~~i~~~-~~~~~~~~~~~~d~ii~tv~----- 238 (339)
T COG1064 165 KPGKWVAVVGAGGLGHMAVQYAKAMGAEVIAITRSEEKLELAKKLGADHVINSS-DSDALEAVKEIADAIIDTVG----- 238 (339)
T ss_pred CCCCEEEEECCcHHHHHHHHHHHHcCCeEEEEeCChHHHHHHHHhCCcEEEEcC-CchhhHHhHhhCcEEEECCC-----
Confidence 446899999988999999999999999999999999988777767766554433 5443 333 23788887763
Q ss_pred CCCCChhhhHHHHHHHHhhcCCccEEEEEcc
Q 017914 135 EGTGDPMLKHGELLRSTLMNGHLQWLGYLSS 165 (364)
Q Consensus 135 ~~~~~~~~~~~~~l~~a~~~~~~~r~v~~Ss 165 (364)
.....+.+.+++..| +++.++-
T Consensus 239 -------~~~~~~~l~~l~~~G--~~v~vG~ 260 (339)
T COG1064 239 -------PATLEPSLKALRRGG--TLVLVGL 260 (339)
T ss_pred -------hhhHHHHHHHHhcCC--EEEEECC
Confidence 122345566677666 7887663
|
|
| >PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate | Back alignment and domain information |
|---|
Probab=97.10 E-value=0.0023 Score=48.89 Aligned_cols=90 Identities=19% Similarity=0.276 Sum_probs=50.7
Q ss_pred eEEEEc-CChhhHHHHHHHHhC-CCEEEEEEeCch-hhhhhhh-----CCceEEEccCChhhHHhhccCceeeEEEEecC
Q 017914 61 RMLILG-MGFVGRIFAEKIKNQ-GWVVSGTCTNVM-KKKELEQ-----SGFDVHLFNANETALMILTTLKNYTHLLVSIP 132 (364)
Q Consensus 61 ~vlVtG-tG~iG~~l~~~L~~~-g~~V~~~~r~~~-~~~~l~~-----~~~~~~~~D~~~~~~~~~~~~d~v~~~~~~~~ 132 (364)
||.|+| ||++|+.|++.|.+. .+++..+..+.. ....+.. .+.. ...+.+.+...+.++|.|+.+...
T Consensus 1 rV~IvGAtG~vG~~l~~lL~~hp~~e~~~~~~~~~~~g~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~Dvvf~a~~~-- 76 (121)
T PF01118_consen 1 RVAIVGATGYVGRELLRLLAEHPDFELVALVSSSRSAGKPLSEVFPHPKGFE--DLSVEDADPEELSDVDVVFLALPH-- 76 (121)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTSTEEEEEEEESTTTTTSBHHHTTGGGTTTE--EEBEEETSGHHHTTESEEEE-SCH--
T ss_pred CEEEECCCCHHHHHHHHHHhcCCCccEEEeeeeccccCCeeehhcccccccc--ceeEeecchhHhhcCCEEEecCch--
Confidence 689999 999999999999996 357666555443 2222211 1111 111222222456889999987631
Q ss_pred CCCCCCChhhhHHHHHHHHhhcCCccEEEEEcc
Q 017914 133 PLEGTGDPMLKHGELLRSTLMNGHLQWLGYLSS 165 (364)
Q Consensus 133 ~~~~~~~~~~~~~~~l~~a~~~~~~~r~v~~Ss 165 (364)
.....+...+.+.|+ ++|=.|+
T Consensus 77 ----------~~~~~~~~~~~~~g~-~ViD~s~ 98 (121)
T PF01118_consen 77 ----------GASKELAPKLLKAGI-KVIDLSG 98 (121)
T ss_dssp ----------HHHHHHHHHHHHTTS-EEEESSS
T ss_pred ----------hHHHHHHHHHhhCCc-EEEeCCH
Confidence 222334444455666 4665554
|
This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C .... |
| >PRK08664 aspartate-semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=97.05 E-value=0.0021 Score=58.86 Aligned_cols=36 Identities=25% Similarity=0.398 Sum_probs=29.9
Q ss_pred CCCeEEEEc-CChhhHHHHHHHHhCC-CEEEEEEeCch
Q 017914 58 SPNRMLILG-MGFVGRIFAEKIKNQG-WVVSGTCTNVM 93 (364)
Q Consensus 58 ~~~~vlVtG-tG~iG~~l~~~L~~~g-~~V~~~~r~~~ 93 (364)
++++|+|+| ||++|+.|++.|.+.. .+++++.++..
T Consensus 2 ~~~~V~I~GatG~iG~~l~~~L~~~p~~el~~~~~s~~ 39 (349)
T PRK08664 2 MKLKVGILGATGMVGQRFVQLLANHPWFEVTALAASER 39 (349)
T ss_pred CCcEEEEECCCCHHHHHHHHHHHcCCCceEEEEEcChh
Confidence 458999999 9999999999999875 48888866543
|
|
| >TIGR02355 moeB molybdopterin synthase sulfurylase MoeB | Back alignment and domain information |
|---|
Probab=97.03 E-value=0.0064 Score=52.39 Aligned_cols=102 Identities=13% Similarity=0.131 Sum_probs=61.3
Q ss_pred CCCCeEEEEcCChhhHHHHHHHHhCCC-EEEEEEeCchhhhhhh-----------------------h--CC--ceEEEc
Q 017914 57 QSPNRMLILGMGFVGRIFAEKIKNQGW-VVSGTCTNVMKKKELE-----------------------Q--SG--FDVHLF 108 (364)
Q Consensus 57 ~~~~~vlVtGtG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~l~-----------------------~--~~--~~~~~~ 108 (364)
....+|+|+|.|.+|+.++..|...|. ++++++.+.-....+. + +. ++.+..
T Consensus 22 L~~~~VlvvG~GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~RQ~l~~~~diG~~Ka~~a~~~l~~inp~v~i~~~~~ 101 (240)
T TIGR02355 22 LKASRVLIVGLGGLGCAASQYLAAAGVGNLTLLDFDTVSLSNLQRQVLHSDANIGQPKVESAKDALTQINPHIAINPINA 101 (240)
T ss_pred HhCCcEEEECcCHHHHHHHHHHHHcCCCEEEEEeCCcccccCcccceeeeHhhCCCcHHHHHHHHHHHHCCCcEEEEEec
Confidence 445799999999999999999999985 6666665432221111 0 22 233333
Q ss_pred cCChhhH-HhhccCceeeEEEEecCCCCCCCChhhhHHHHHHHHhhcCCccEEEEEccceeec
Q 017914 109 NANETAL-MILTTLKNYTHLLVSIPPLEGTGDPMLKHGELLRSTLMNGHLQWLGYLSSTGVYG 170 (364)
Q Consensus 109 D~~~~~~-~~~~~~d~v~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~r~v~~Ss~~vy~ 170 (364)
.++..+. +.+.++|.|+.+.. +. .....+-+++.+.+++ +|+.++.+.+|
T Consensus 102 ~i~~~~~~~~~~~~DlVvd~~D---------~~--~~r~~ln~~~~~~~ip-~v~~~~~g~~G 152 (240)
T TIGR02355 102 KLDDAELAALIAEHDIVVDCTD---------NV--EVRNQLNRQCFAAKVP-LVSGAAIRMEG 152 (240)
T ss_pred cCCHHHHHHHhhcCCEEEEcCC---------CH--HHHHHHHHHHHHcCCC-EEEEEecccEe
Confidence 3433333 45677787777652 11 2234455667777664 77766554444
|
This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899). |
| >cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase | Back alignment and domain information |
|---|
Probab=97.02 E-value=0.0016 Score=52.13 Aligned_cols=73 Identities=18% Similarity=0.084 Sum_probs=50.8
Q ss_pred CCCCeEEEEcCChhhHHHHHHHHhCC-CEEEEEEeCchhhhhhhh-CCceEEEccCChhhHHhhccCceeeEEEEe
Q 017914 57 QSPNRMLILGMGFVGRIFAEKIKNQG-WVVSGTCTNVMKKKELEQ-SGFDVHLFNANETALMILTTLKNYTHLLVS 130 (364)
Q Consensus 57 ~~~~~vlVtGtG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~l~~-~~~~~~~~D~~~~~~~~~~~~d~v~~~~~~ 130 (364)
..+++|+|+|+|.+|..+++.|.+.| ++|++.+|+.++...+.+ .+...+..+..+.+ +.+.++|.|+.+...
T Consensus 17 ~~~~~i~iiG~G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~Dvvi~~~~~ 91 (155)
T cd01065 17 LKGKKVLILGAGGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGELGIAIAYLDLE-ELLAEADLIINTTPV 91 (155)
T ss_pred CCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhcccceeecchh-hccccCCEEEeCcCC
Confidence 34579999999999999999999996 899999998776655432 12211122333322 346788998888744
|
Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann |
| >PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase | Back alignment and domain information |
|---|
Probab=97.02 E-value=0.003 Score=64.90 Aligned_cols=72 Identities=19% Similarity=0.187 Sum_probs=56.3
Q ss_pred CCCeEEEEcCChhhHHHHHHHHhC-CCE-------------EEEEEeCchhhhhhhh--CCceEEEccCChhhH--Hhhc
Q 017914 58 SPNRMLILGMGFVGRIFAEKIKNQ-GWV-------------VSGTCTNVMKKKELEQ--SGFDVHLFNANETAL--MILT 119 (364)
Q Consensus 58 ~~~~vlVtGtG~iG~~l~~~L~~~-g~~-------------V~~~~r~~~~~~~l~~--~~~~~~~~D~~~~~~--~~~~ 119 (364)
.+++|+|+|+|++|+.+++.|.+. +++ |.+.+++.+..+.+.+ ++++.+..|+.|.+. ..++
T Consensus 568 ~~~rIlVLGAG~VG~~~a~~La~~~~~~~~~~~~~~~~~~lV~VaD~~~~~a~~la~~~~~~~~v~lDv~D~e~L~~~v~ 647 (1042)
T PLN02819 568 KSQNVLILGAGRVCRPAAEYLASVKTISYYGDDSEEPTDVHVIVASLYLKDAKETVEGIENAEAVQLDVSDSESLLKYVS 647 (1042)
T ss_pred cCCcEEEECCCHHHHHHHHHHHhCcCccccccccccccccEEEEECCCHHHHHHHHHhcCCCceEEeecCCHHHHHHhhc
Confidence 467999999999999999999875 333 7788888777665543 367889999998663 4557
Q ss_pred cCceeeEEEE
Q 017914 120 TLKNYTHLLV 129 (364)
Q Consensus 120 ~~d~v~~~~~ 129 (364)
++|+|+.+.-
T Consensus 648 ~~DaVIsalP 657 (1042)
T PLN02819 648 QVDVVISLLP 657 (1042)
T ss_pred CCCEEEECCC
Confidence 8999988774
|
|
| >TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit | Back alignment and domain information |
|---|
Probab=97.01 E-value=0.0019 Score=57.23 Aligned_cols=69 Identities=13% Similarity=0.142 Sum_probs=51.2
Q ss_pred CCCCeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCChhhHHhhccCceeeEEE
Q 017914 57 QSPNRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETALMILTTLKNYTHLL 128 (364)
Q Consensus 57 ~~~~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~~~~~~~d~v~~~~ 128 (364)
..+++|+|+|.|.+|+.+++.|...|++|++.+|+.++.......+...+. +.+.+ ..+.++|.|+++.
T Consensus 149 l~gk~v~IiG~G~iG~avA~~L~~~G~~V~v~~R~~~~~~~~~~~g~~~~~--~~~l~-~~l~~aDiVint~ 217 (287)
T TIGR02853 149 IHGSNVMVLGFGRTGMTIARTFSALGARVFVGARSSADLARITEMGLIPFP--LNKLE-EKVAEIDIVINTI 217 (287)
T ss_pred CCCCEEEEEcChHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHCCCeeec--HHHHH-HHhccCCEEEECC
Confidence 456899999999999999999999999999999987765444333443322 22211 5668899999865
|
This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA. |
| >PRK08229 2-dehydropantoate 2-reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.00 E-value=0.0021 Score=58.82 Aligned_cols=69 Identities=17% Similarity=0.209 Sum_probs=47.0
Q ss_pred CCCeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEc----------cC--ChhhHHhhccCceee
Q 017914 58 SPNRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLF----------NA--NETALMILTTLKNYT 125 (364)
Q Consensus 58 ~~~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~----------D~--~~~~~~~~~~~d~v~ 125 (364)
|+|+|.|+|+|.+|..++..|.+.|++|++++|+.. .+.+...++.+... .+ .+ +......+|.|+
T Consensus 1 ~~mkI~IiG~G~mG~~~A~~L~~~G~~V~~~~r~~~-~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~D~vi 78 (341)
T PRK08229 1 MMARICVLGAGSIGCYLGGRLAAAGADVTLIGRARI-GDELRAHGLTLTDYRGRDVRVPPSAIAFST-DPAALATADLVL 78 (341)
T ss_pred CCceEEEECCCHHHHHHHHHHHhcCCcEEEEecHHH-HHHHHhcCceeecCCCcceecccceeEecc-ChhhccCCCEEE
Confidence 468999999999999999999999999999999653 23343334332110 01 11 113456788888
Q ss_pred EEE
Q 017914 126 HLL 128 (364)
Q Consensus 126 ~~~ 128 (364)
.+.
T Consensus 79 l~v 81 (341)
T PRK08229 79 VTV 81 (341)
T ss_pred EEe
Confidence 766
|
|
| >PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins | Back alignment and domain information |
|---|
Probab=97.00 E-value=0.0017 Score=49.67 Aligned_cols=68 Identities=16% Similarity=0.124 Sum_probs=39.7
Q ss_pred CCCCeEEEEcCChhhHHHHHHHHhCCCEEEEE-EeCchhhhhhhhCCceEEEccCChhhHHhhccCceeeEEE
Q 017914 57 QSPNRMLILGMGFVGRIFAEKIKNQGWVVSGT-CTNVMKKKELEQSGFDVHLFNANETALMILTTLKNYTHLL 128 (364)
Q Consensus 57 ~~~~~vlVtGtG~iG~~l~~~L~~~g~~V~~~-~r~~~~~~~l~~~~~~~~~~D~~~~~~~~~~~~d~v~~~~ 128 (364)
...++|-|+|+|.+|.+|.+.|.+.||.|.++ +|+....+.+.. .+. .....+.+ +.+...|.++..+
T Consensus 8 ~~~l~I~iIGaGrVG~~La~aL~~ag~~v~~v~srs~~sa~~a~~-~~~--~~~~~~~~-~~~~~aDlv~iav 76 (127)
T PF10727_consen 8 AARLKIGIIGAGRVGTALARALARAGHEVVGVYSRSPASAERAAA-FIG--AGAILDLE-EILRDADLVFIAV 76 (127)
T ss_dssp ----EEEEECTSCCCCHHHHHHHHTTSEEEEESSCHH-HHHHHHC---T--T-----TT-GGGCC-SEEEE-S
T ss_pred CCccEEEEECCCHHHHHHHHHHHHCCCeEEEEEeCCccccccccc-ccc--cccccccc-cccccCCEEEEEe
Confidence 34579999999999999999999999999887 465544443321 000 01111111 4566778777765
|
This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A. |
| >PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism | Back alignment and domain information |
|---|
Probab=96.99 E-value=0.0034 Score=51.61 Aligned_cols=64 Identities=17% Similarity=0.087 Sum_probs=40.4
Q ss_pred CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCChhhH----HhhccCceeeEEEEecCC
Q 017914 67 MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETAL----MILTTLKNYTHLLVSIPP 133 (364)
Q Consensus 67 tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~----~~~~~~d~v~~~~~~~~~ 133 (364)
||..|.+|++.+..+|++|+.+..... ... ..++..+.+.-.+.-. ..+...|+++|+|+....
T Consensus 28 SG~~G~~lA~~~~~~Ga~V~li~g~~~-~~~--p~~~~~i~v~sa~em~~~~~~~~~~~Di~I~aAAVsDf 95 (185)
T PF04127_consen 28 SGKMGAALAEEAARRGAEVTLIHGPSS-LPP--PPGVKVIRVESAEEMLEAVKELLPSADIIIMAAAVSDF 95 (185)
T ss_dssp -SHHHHHHHHHHHHTT-EEEEEE-TTS-------TTEEEEE-SSHHHHHHHHHHHGGGGSEEEE-SB--SE
T ss_pred cCHHHHHHHHHHHHCCCEEEEEecCcc-ccc--cccceEEEecchhhhhhhhccccCcceeEEEecchhhe
Confidence 699999999999999999999998742 111 2467777665443211 455677999999986443
|
These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A. |
| >PRK07417 arogenate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=96.98 E-value=0.0021 Score=56.99 Aligned_cols=65 Identities=18% Similarity=0.290 Sum_probs=47.3
Q ss_pred CeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCChhhHHhhccCceeeEEE
Q 017914 60 NRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETALMILTTLKNYTHLL 128 (364)
Q Consensus 60 ~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~~~~~~~d~v~~~~ 128 (364)
|+|.|+|.|.+|..++..|.++|++|++.+|+++..+.+...+.. +....+...+.++|.|+-++
T Consensus 1 m~I~IIG~G~mG~sla~~L~~~g~~V~~~d~~~~~~~~a~~~g~~----~~~~~~~~~~~~aDlVilav 65 (279)
T PRK07417 1 MKIGIVGLGLIGGSLGLDLRSLGHTVYGVSRRESTCERAIERGLV----DEASTDLSLLKDCDLVILAL 65 (279)
T ss_pred CeEEEEeecHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCCc----ccccCCHhHhcCCCEEEEcC
Confidence 579999999999999999999999999999988766555443321 11111113467788887765
|
|
| >cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase | Back alignment and domain information |
|---|
Probab=96.96 E-value=0.0029 Score=52.90 Aligned_cols=67 Identities=16% Similarity=0.124 Sum_probs=48.1
Q ss_pred CCCCCeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhC-CceEEEccCChhhHHhh-ccCceeeEEE
Q 017914 56 WQSPNRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQS-GFDVHLFNANETALMIL-TTLKNYTHLL 128 (364)
Q Consensus 56 ~~~~~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~-~~~~~~~D~~~~~~~~~-~~~d~v~~~~ 128 (364)
...+|+|+|+|.|.+|+++++.|.+.|++|++.+++.+....+... +...+ |. + ..+ ..+|+++.++
T Consensus 25 ~l~gk~v~I~G~G~vG~~~A~~L~~~G~~Vvv~D~~~~~~~~~~~~~g~~~v--~~---~-~l~~~~~Dv~vp~A 93 (200)
T cd01075 25 SLEGKTVAVQGLGKVGYKLAEHLLEEGAKLIVADINEEAVARAAELFGATVV--AP---E-EIYSVDADVFAPCA 93 (200)
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHcCCEEE--cc---h-hhccccCCEEEecc
Confidence 4567899999999999999999999999999999987765554332 33322 21 1 122 3688877665
|
Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc |
| >PRK00094 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=96.95 E-value=0.0021 Score=58.31 Aligned_cols=42 Identities=19% Similarity=0.232 Sum_probs=36.9
Q ss_pred CCeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhh
Q 017914 59 PNRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQ 100 (364)
Q Consensus 59 ~~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~ 100 (364)
||+|.|+|+|.+|..++..|.+.|++|++++|+++..+.+..
T Consensus 1 mmkI~iiG~G~mG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~ 42 (325)
T PRK00094 1 MMKIAVLGAGSWGTALAIVLARNGHDVTLWARDPEQAAEINA 42 (325)
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHH
Confidence 478999999999999999999999999999998776665543
|
|
| >PRK12921 2-dehydropantoate 2-reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.95 E-value=0.0031 Score=56.65 Aligned_cols=44 Identities=25% Similarity=0.397 Sum_probs=36.9
Q ss_pred CeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCce
Q 017914 60 NRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFD 104 (364)
Q Consensus 60 ~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~ 104 (364)
|+|+|+|+|.+|..++..|.+.|++|++++| .++.+.+.+.++.
T Consensus 1 mkI~IiG~G~iG~~~a~~L~~~g~~V~~~~r-~~~~~~~~~~g~~ 44 (305)
T PRK12921 1 MRIAVVGAGAVGGTFGGRLLEAGRDVTFLVR-PKRAKALRERGLV 44 (305)
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCceEEEec-HHHHHHHHhCCeE
Confidence 6899999999999999999999999999999 6665555544443
|
|
| >PRK08306 dipicolinate synthase subunit A; Reviewed | Back alignment and domain information |
|---|
Probab=96.92 E-value=0.0025 Score=56.82 Aligned_cols=68 Identities=18% Similarity=0.224 Sum_probs=52.2
Q ss_pred CCCeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCChhhHHhhccCceeeEEE
Q 017914 58 SPNRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETALMILTTLKNYTHLL 128 (364)
Q Consensus 58 ~~~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~~~~~~~d~v~~~~ 128 (364)
.+++|+|+|.|.+|+.++..|...|.+|++.+|++.........+.+++. +.+.. ..+.++|.|++++
T Consensus 151 ~g~kvlViG~G~iG~~~a~~L~~~Ga~V~v~~r~~~~~~~~~~~G~~~~~--~~~l~-~~l~~aDiVI~t~ 218 (296)
T PRK08306 151 HGSNVLVLGFGRTGMTLARTLKALGANVTVGARKSAHLARITEMGLSPFH--LSELA-EEVGKIDIIFNTI 218 (296)
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCeeec--HHHHH-HHhCCCCEEEECC
Confidence 46899999999999999999999999999999997765555445555432 22211 5667899999865
|
|
| >TIGR01915 npdG NADPH-dependent F420 reductase | Back alignment and domain information |
|---|
Probab=96.91 E-value=0.0018 Score=55.19 Aligned_cols=39 Identities=21% Similarity=0.283 Sum_probs=34.7
Q ss_pred CeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhh
Q 017914 60 NRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKEL 98 (364)
Q Consensus 60 ~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l 98 (364)
|+|.|+| +|.+|+.++..|.+.|++|++.+|++++...+
T Consensus 1 MkI~IIGG~G~mG~ala~~L~~~G~~V~v~~r~~~~~~~l 40 (219)
T TIGR01915 1 MKIAVLGGTGDQGKGLALRLAKAGNKIIIGSRDLEKAEEA 40 (219)
T ss_pred CEEEEEcCCCHHHHHHHHHHHhCCCEEEEEEcCHHHHHHH
Confidence 6899997 99999999999999999999999988765544
|
This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase. |
| >cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA | Back alignment and domain information |
|---|
Probab=96.90 E-value=0.0076 Score=51.63 Aligned_cols=103 Identities=14% Similarity=0.046 Sum_probs=62.8
Q ss_pred CCCCCeEEEEcCChhhHHHHHHHHhCCC-EEEEEEeCchhhhh-----------------------hhh--C--CceEEE
Q 017914 56 WQSPNRMLILGMGFVGRIFAEKIKNQGW-VVSGTCTNVMKKKE-----------------------LEQ--S--GFDVHL 107 (364)
Q Consensus 56 ~~~~~~vlVtGtG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~-----------------------l~~--~--~~~~~~ 107 (364)
.....+|+|+|.|.+|+++++.|...|. ++++++.+.-.... +.+ + .++.+.
T Consensus 18 ~L~~~~VlivG~GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~i~~~~ 97 (228)
T cd00757 18 KLKNARVLVVGAGGLGSPAAEYLAAAGVGKLGLVDDDVVELSNLQRQILHTEADVGQPKAEAAAERLRAINPDVEIEAYN 97 (228)
T ss_pred HHhCCcEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCEEcCcccccccccChhhCCChHHHHHHHHHHHhCCCCEEEEec
Confidence 3456799999999999999999999996 66666543211111 111 2 234444
Q ss_pred ccCChhhH-HhhccCceeeEEEEecCCCCCCCChhhhHHHHHHHHhhcCCccEEEEEccceeec
Q 017914 108 FNANETAL-MILTTLKNYTHLLVSIPPLEGTGDPMLKHGELLRSTLMNGHLQWLGYLSSTGVYG 170 (364)
Q Consensus 108 ~D~~~~~~-~~~~~~d~v~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~r~v~~Ss~~vy~ 170 (364)
.+++..+. ..+.++|.|+.+... . .....+.+.+.+.++ .+|+.+..+.+|
T Consensus 98 ~~i~~~~~~~~~~~~DvVi~~~d~---------~--~~r~~l~~~~~~~~i-p~i~~g~~g~~g 149 (228)
T cd00757 98 ERLDAENAEELIAGYDLVLDCTDN---------F--ATRYLINDACVKLGK-PLVSGAVLGFEG 149 (228)
T ss_pred ceeCHHHHHHHHhCCCEEEEcCCC---------H--HHHHHHHHHHHHcCC-CEEEEEeccCEE
Confidence 45544333 556778888876531 1 223456666777765 488776555443
|
Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1). |
| >KOG2733 consensus Uncharacterized membrane protein [Function unknown] | Back alignment and domain information |
|---|
Probab=96.90 E-value=0.0024 Score=56.47 Aligned_cols=71 Identities=17% Similarity=0.234 Sum_probs=55.3
Q ss_pred eEEEEc-CChhhHHHHHHHHh----CCCEEEEEEeCchhhhhhhh----------CCceEEEccCChhhH--HhhccCce
Q 017914 61 RMLILG-MGFVGRIFAEKIKN----QGWVVSGTCTNVMKKKELEQ----------SGFDVHLFNANETAL--MILTTLKN 123 (364)
Q Consensus 61 ~vlVtG-tG~iG~~l~~~L~~----~g~~V~~~~r~~~~~~~l~~----------~~~~~~~~D~~~~~~--~~~~~~d~ 123 (364)
.++|.| +||.|.++++++.+ .|...-+..|++++....-+ ....++.+|.+|++. +..+.+.+
T Consensus 7 DvVIyGASGfTG~yivee~v~~~~~~~~slavAGRn~~KL~~vL~~~~~k~~~~ls~~~i~i~D~~n~~Sl~emak~~~v 86 (423)
T KOG2733|consen 7 DVVIYGASGFTGKYIVEEAVSSQVFEGLSLAVAGRNEKKLQEVLEKVGEKTGTDLSSSVILIADSANEASLDEMAKQARV 86 (423)
T ss_pred eEEEEccccccceeeHHHHhhhhcccCceEEEecCCHHHHHHHHHHHhhccCCCcccceEEEecCCCHHHHHHHHhhhEE
Confidence 477889 99999999999999 67888889999887654321 223488899999875 56678889
Q ss_pred eeEEEEec
Q 017914 124 YTHLLVSI 131 (364)
Q Consensus 124 v~~~~~~~ 131 (364)
|+++++..
T Consensus 87 ivN~vGPy 94 (423)
T KOG2733|consen 87 IVNCVGPY 94 (423)
T ss_pred EEeccccc
Confidence 99888653
|
|
| >KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=96.89 E-value=0.0094 Score=52.23 Aligned_cols=97 Identities=19% Similarity=0.186 Sum_probs=69.9
Q ss_pred CCCeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCc-hhhhhhhhCCceEEEccCChhhH--HhhccCceeeEEEEecCCC
Q 017914 58 SPNRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNV-MKKKELEQSGFDVHLFNANETAL--MILTTLKNYTHLLVSIPPL 134 (364)
Q Consensus 58 ~~~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~-~~~~~l~~~~~~~~~~D~~~~~~--~~~~~~d~v~~~~~~~~~~ 134 (364)
.+++|-|+|.|.+|+--++...+.|++|++++++. .+.+.+...+.+.+..-..|+++ ...+..|.++|.+.+...
T Consensus 181 pG~~vgI~GlGGLGh~aVq~AKAMG~rV~vis~~~~kkeea~~~LGAd~fv~~~~d~d~~~~~~~~~dg~~~~v~~~a~- 259 (360)
T KOG0023|consen 181 PGKWVGIVGLGGLGHMAVQYAKAMGMRVTVISTSSKKKEEAIKSLGADVFVDSTEDPDIMKAIMKTTDGGIDTVSNLAE- 259 (360)
T ss_pred CCcEEEEecCcccchHHHHHHHHhCcEEEEEeCCchhHHHHHHhcCcceeEEecCCHHHHHHHHHhhcCcceeeeeccc-
Confidence 67899999944499988888888999999999987 55555666788877665557776 455667888888865411
Q ss_pred CCCCChhhhHHHHHHHHhhcCCccEEEEEcc
Q 017914 135 EGTGDPMLKHGELLRSTLMNGHLQWLGYLSS 165 (364)
Q Consensus 135 ~~~~~~~~~~~~~l~~a~~~~~~~r~v~~Ss 165 (364)
. ...-+++.++..| ++|+++-
T Consensus 260 ----~----~~~~~~~~lk~~G--t~V~vg~ 280 (360)
T KOG0023|consen 260 ----H----ALEPLLGLLKVNG--TLVLVGL 280 (360)
T ss_pred ----c----chHHHHHHhhcCC--EEEEEeC
Confidence 1 1223456666665 7888874
|
|
| >PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=96.89 E-value=0.0033 Score=59.82 Aligned_cols=70 Identities=21% Similarity=0.175 Sum_probs=53.3
Q ss_pred CCCeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCch-hh----hhhhhCCceEEEccCChhhHHhhccCceeeEEEEe
Q 017914 58 SPNRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVM-KK----KELEQSGFDVHLFNANETALMILTTLKNYTHLLVS 130 (364)
Q Consensus 58 ~~~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~-~~----~~l~~~~~~~~~~D~~~~~~~~~~~~d~v~~~~~~ 130 (364)
.+++|+|+|.|.+|..+++.|+++|++|++.++... .. ..+...++.++.+|..+ ....++|.|++.++.
T Consensus 4 ~~k~v~iiG~g~~G~~~A~~l~~~G~~V~~~d~~~~~~~~~~~~~l~~~~~~~~~~~~~~---~~~~~~d~vv~~~g~ 78 (450)
T PRK14106 4 KGKKVLVVGAGVSGLALAKFLKKLGAKVILTDEKEEDQLKEALEELGELGIELVLGEYPE---EFLEGVDLVVVSPGV 78 (450)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCEEEeCCcch---hHhhcCCEEEECCCC
Confidence 468999999777999999999999999999999742 22 23334577888888876 234567888876653
|
|
| >PRK00436 argC N-acetyl-gamma-glutamyl-phosphate reductase; Validated | Back alignment and domain information |
|---|
Probab=96.89 E-value=0.0041 Score=56.74 Aligned_cols=99 Identities=14% Similarity=0.011 Sum_probs=55.4
Q ss_pred CCCeEEEEc-CChhhHHHHHHHHhC-CCEEEEEEeCchhhhhhhh--CCceEE-EccCChhhHHhhccCceeeEEEEecC
Q 017914 58 SPNRMLILG-MGFVGRIFAEKIKNQ-GWVVSGTCTNVMKKKELEQ--SGFDVH-LFNANETALMILTTLKNYTHLLVSIP 132 (364)
Q Consensus 58 ~~~~vlVtG-tG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~l~~--~~~~~~-~~D~~~~~~~~~~~~d~v~~~~~~~~ 132 (364)
+|++|+|+| ||++|+.+++.|.+. +++++++.++......+.+ ..+..+ ..++.+.+.....++|+|+.+...
T Consensus 1 ~m~kVaIiGAtG~vG~~l~~~L~~~p~~elv~v~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~vD~Vf~alP~-- 78 (343)
T PRK00436 1 MMIKVGIVGASGYTGGELLRLLLNHPEVEIVAVTSRSSAGKPLSDVHPHLRGLVDLVLEPLDPEILAGADVVFLALPH-- 78 (343)
T ss_pred CCeEEEEECCCCHHHHHHHHHHHcCCCceEEEEECccccCcchHHhCcccccccCceeecCCHHHhcCCCEEEECCCc--
Confidence 357999999 899999999999987 6888887764332222211 111111 112322221244668887765521
Q ss_pred CCCCCCChhhhHHHHHHHHhhcCCccEEEEEccceee
Q 017914 133 PLEGTGDPMLKHGELLRSTLMNGHLQWLGYLSSTGVY 169 (364)
Q Consensus 133 ~~~~~~~~~~~~~~~l~~a~~~~~~~r~v~~Ss~~vy 169 (364)
.....+...+.+.| +++|=.|+..-+
T Consensus 79 ----------~~~~~~v~~a~~aG-~~VID~S~~fR~ 104 (343)
T PRK00436 79 ----------GVSMDLAPQLLEAG-VKVIDLSADFRL 104 (343)
T ss_pred ----------HHHHHHHHHHHhCC-CEEEECCcccCC
Confidence 12233344444455 467777765433
|
|
| >PRK00258 aroE shikimate 5-dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=96.88 E-value=0.002 Score=57.06 Aligned_cols=72 Identities=18% Similarity=0.112 Sum_probs=49.2
Q ss_pred CCCCeEEEEcCChhhHHHHHHHHhCC-CEEEEEEeCchhhhhhhhCCceEEEccCChhhH-HhhccCceeeEEEE
Q 017914 57 QSPNRMLILGMGFVGRIFAEKIKNQG-WVVSGTCTNVMKKKELEQSGFDVHLFNANETAL-MILTTLKNYTHLLV 129 (364)
Q Consensus 57 ~~~~~vlVtGtG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~-~~~~~~d~v~~~~~ 129 (364)
..+++|+|+|+|.+|+.++..|...| .+|++++|+.++...+.+.--.....++ +.+. ..+..+|.|+++..
T Consensus 121 ~~~k~vlVlGaGg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~~~~~~~~-~~~~~~~~~~~DivInaTp 194 (278)
T PRK00258 121 LKGKRILILGAGGAARAVILPLLDLGVAEITIVNRTVERAEELAKLFGALGKAEL-DLELQEELADFDLIINATS 194 (278)
T ss_pred CCCCEEEEEcCcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccceee-cccchhccccCCEEEECCc
Confidence 45679999999999999999999999 7999999998876655321000000111 1111 45567788887764
|
|
| >PRK11559 garR tartronate semialdehyde reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.87 E-value=0.0033 Score=56.24 Aligned_cols=65 Identities=12% Similarity=0.239 Sum_probs=49.5
Q ss_pred CCeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCChhhHHhhccCceeeEEE
Q 017914 59 PNRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETALMILTTLKNYTHLL 128 (364)
Q Consensus 59 ~~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~~~~~~~d~v~~~~ 128 (364)
+|+|.|+|.|.+|+.+++.|.+.|++|++.+|++++...+...++... .+.+ +.+..+|.|+-+.
T Consensus 2 ~~~IgviG~G~mG~~~a~~l~~~g~~v~~~d~~~~~~~~~~~~g~~~~----~~~~-e~~~~~d~vi~~v 66 (296)
T PRK11559 2 TMKVGFIGLGIMGKPMSKNLLKAGYSLVVYDRNPEAVAEVIAAGAETA----STAK-AVAEQCDVIITML 66 (296)
T ss_pred CceEEEEccCHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHCCCeec----CCHH-HHHhcCCEEEEeC
Confidence 578999999999999999999999999999999877666554444221 1122 4567788888776
|
|
| >PRK08328 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=96.86 E-value=0.012 Score=50.52 Aligned_cols=103 Identities=17% Similarity=0.161 Sum_probs=62.2
Q ss_pred CCCCeEEEEcCChhhHHHHHHHHhCCC-EEEEEEeCchhhhhh------------------------h--hCC--ceEEE
Q 017914 57 QSPNRMLILGMGFVGRIFAEKIKNQGW-VVSGTCTNVMKKKEL------------------------E--QSG--FDVHL 107 (364)
Q Consensus 57 ~~~~~vlVtGtG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~l------------------------~--~~~--~~~~~ 107 (364)
....+|+|+|.|.+|+.++..|...|. ++++++.+.-....+ . .+. ++.+.
T Consensus 25 L~~~~VlIiG~GGlGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~dvG~~~k~~~a~~~l~~~np~v~v~~~~ 104 (231)
T PRK08328 25 LKKAKVAVVGVGGLGSPVAYYLAAAGVGRILLIDEQTPELSNLNRQILHWEEDLGKNPKPLSAKWKLERFNSDIKIETFV 104 (231)
T ss_pred HhCCcEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCccChhhhccccccChhhcCchHHHHHHHHHHHHhCCCCEEEEEe
Confidence 455789999999999999999999995 677776432111111 1 022 23333
Q ss_pred ccCChhhH-HhhccCceeeEEEEecCCCCCCCChhhhHHHHHHHHhhcCCccEEEEEccceeecC
Q 017914 108 FNANETAL-MILTTLKNYTHLLVSIPPLEGTGDPMLKHGELLRSTLMNGHLQWLGYLSSTGVYGH 171 (364)
Q Consensus 108 ~D~~~~~~-~~~~~~d~v~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~r~v~~Ss~~vy~~ 171 (364)
..++..+. ..++++|.|+.+... . .....+.++|...+++ +|+.++.+.||.
T Consensus 105 ~~~~~~~~~~~l~~~D~Vid~~d~---------~--~~r~~l~~~~~~~~ip-~i~g~~~g~~G~ 157 (231)
T PRK08328 105 GRLSEENIDEVLKGVDVIVDCLDN---------F--ETRYLLDDYAHKKGIP-LVHGAVEGTYGQ 157 (231)
T ss_pred ccCCHHHHHHHHhcCCEEEECCCC---------H--HHHHHHHHHHHHcCCC-EEEEeeccCEEE
Confidence 44433332 456677777776521 1 1233455567777754 888777666653
|
|
| >PRK05597 molybdopterin biosynthesis protein MoeB; Validated | Back alignment and domain information |
|---|
Probab=96.86 E-value=0.008 Score=55.04 Aligned_cols=103 Identities=9% Similarity=-0.050 Sum_probs=64.5
Q ss_pred CCCCCeEEEEcCChhhHHHHHHHHhCCC-EEEEEEeCchhhhh-----------------------hhh--CC--ceEEE
Q 017914 56 WQSPNRMLILGMGFVGRIFAEKIKNQGW-VVSGTCTNVMKKKE-----------------------LEQ--SG--FDVHL 107 (364)
Q Consensus 56 ~~~~~~vlVtGtG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~-----------------------l~~--~~--~~~~~ 107 (364)
.....+|+|+|.|.+|+.++..|...|. ++++++.+.-.... +.+ +. ++.+.
T Consensus 25 ~L~~~~VlivG~GGlGs~~a~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~np~v~v~~~~ 104 (355)
T PRK05597 25 SLFDAKVAVIGAGGLGSPALLYLAGAGVGHITIIDDDTVDLSNLHRQVIHSTAGVGQPKAESAREAMLALNPDVKVTVSV 104 (355)
T ss_pred HHhCCeEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCEEcccccccCcccChhHCCChHHHHHHHHHHHHCCCcEEEEEE
Confidence 3456799999999999999999999996 66666654311111 111 22 34444
Q ss_pred ccCChhhH-HhhccCceeeEEEEecCCCCCCCChhhhHHHHHHHHhhcCCccEEEEEccceeec
Q 017914 108 FNANETAL-MILTTLKNYTHLLVSIPPLEGTGDPMLKHGELLRSTLMNGHLQWLGYLSSTGVYG 170 (364)
Q Consensus 108 ~D~~~~~~-~~~~~~d~v~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~r~v~~Ss~~vy~ 170 (364)
..++..+. ..+.++|.|+.+... . .....+..+|.+.+++ +|+.+..+.+|
T Consensus 105 ~~i~~~~~~~~~~~~DvVvd~~d~---------~--~~r~~~n~~c~~~~ip-~v~~~~~g~~g 156 (355)
T PRK05597 105 RRLTWSNALDELRDADVILDGSDN---------F--DTRHLASWAAARLGIP-HVWASILGFDA 156 (355)
T ss_pred eecCHHHHHHHHhCCCEEEECCCC---------H--HHHHHHHHHHHHcCCC-EEEEEEecCeE
Confidence 55554443 567888988887631 1 2223455667777664 88876655444
|
|
| >PRK11880 pyrroline-5-carboxylate reductase; Reviewed | Back alignment and domain information |
|---|
Probab=96.84 E-value=0.0031 Score=55.50 Aligned_cols=66 Identities=9% Similarity=0.043 Sum_probs=48.3
Q ss_pred CCCeEEEEcCChhhHHHHHHHHhCC---CEEEEEEeCchhhhhhhhC-CceEEEccCChhhHHhhccCceeeEEE
Q 017914 58 SPNRMLILGMGFVGRIFAEKIKNQG---WVVSGTCTNVMKKKELEQS-GFDVHLFNANETALMILTTLKNYTHLL 128 (364)
Q Consensus 58 ~~~~vlVtGtG~iG~~l~~~L~~~g---~~V~~~~r~~~~~~~l~~~-~~~~~~~D~~~~~~~~~~~~d~v~~~~ 128 (364)
|||+|.|+|.|.+|..+++.|.+.| ++|++.+|+++..+.+... ++.. .+.....+..+|.|+-+.
T Consensus 1 ~mm~I~iIG~G~mG~~la~~l~~~g~~~~~v~v~~r~~~~~~~~~~~~g~~~-----~~~~~~~~~~advVil~v 70 (267)
T PRK11880 1 MMKKIGFIGGGNMASAIIGGLLASGVPAKDIIVSDPSPEKRAALAEEYGVRA-----ATDNQEAAQEADVVVLAV 70 (267)
T ss_pred CCCEEEEEechHHHHHHHHHHHhCCCCcceEEEEcCCHHHHHHHHHhcCCee-----cCChHHHHhcCCEEEEEc
Confidence 4689999999999999999999998 7899999988776655432 3322 221224456788887655
|
|
| >TIGR03026 NDP-sugDHase nucleotide sugar dehydrogenase | Back alignment and domain information |
|---|
Probab=96.79 E-value=0.013 Score=55.02 Aligned_cols=40 Identities=25% Similarity=0.482 Sum_probs=36.2
Q ss_pred CeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCchhhhhhh
Q 017914 60 NRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELE 99 (364)
Q Consensus 60 ~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~ 99 (364)
|+|.|+|.|++|..++..|.+.||+|+++++++++.+.+.
T Consensus 1 mkI~vIGlG~~G~~lA~~La~~G~~V~~~d~~~~~v~~l~ 40 (411)
T TIGR03026 1 MKIAVIGLGYVGLPLAALLADLGHEVTGVDIDQEKVDKLN 40 (411)
T ss_pred CEEEEECCCchhHHHHHHHHhcCCeEEEEECCHHHHHHhh
Confidence 5799999999999999999999999999999988776654
|
All of these enzymes contain three Pfam domains, pfam03721, pfam00984, and pfam03720 for the N-terminal, central, and C-terminal regions respectively. |
| >TIGR01296 asd_B aspartate-semialdehyde dehydrogenase (peptidoglycan organisms) | Back alignment and domain information |
|---|
Probab=96.78 E-value=0.0042 Score=56.47 Aligned_cols=66 Identities=11% Similarity=0.152 Sum_probs=43.8
Q ss_pred eEEEEc-CChhhHHHHHHHHhCCCEEE---EEEeCchhhhhhhhCCceEEEccCChhhHHhhccCceeeEEEE
Q 017914 61 RMLILG-MGFVGRIFAEKIKNQGWVVS---GTCTNVMKKKELEQSGFDVHLFNANETALMILTTLKNYTHLLV 129 (364)
Q Consensus 61 ~vlVtG-tG~iG~~l~~~L~~~g~~V~---~~~r~~~~~~~l~~~~~~~~~~D~~~~~~~~~~~~d~v~~~~~ 129 (364)
+|+|+| ||++|+.|++.|.+++|.+. .+.+.......+...+......|+.. ..+.++|.|+.+.+
T Consensus 1 ~VaIvGAtG~vG~eLi~lL~~~~hp~~~l~~~as~~~~g~~~~~~~~~~~~~~~~~---~~~~~~D~v~~a~g 70 (339)
T TIGR01296 1 NVAIVGATGAVGQEMLKILEERNFPIDKLVLLASDRSAGRKVTFKGKELEVNEAKI---ESFEGIDIALFSAG 70 (339)
T ss_pred CEEEEcCCCHHHHHHHHHHHhCCCChhhEEEEeccccCCCeeeeCCeeEEEEeCCh---HHhcCCCEEEECCC
Confidence 589999 99999999999999888654 44455433333322344555556642 34577888887663
|
Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. This model represents a branch more closely related to the USG-1 protein than to the other aspartate-semialdehyde dehydrogenases represented in model TIGR00978. |
| >PRK06522 2-dehydropantoate 2-reductase; Reviewed | Back alignment and domain information |
|---|
Probab=96.78 E-value=0.0044 Score=55.63 Aligned_cols=44 Identities=23% Similarity=0.430 Sum_probs=37.4
Q ss_pred CeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCc
Q 017914 60 NRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGF 103 (364)
Q Consensus 60 ~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~ 103 (364)
|+|+|+|+|.+|..++..|.+.|++|++++|+.+..+.+...++
T Consensus 1 m~I~IiG~G~~G~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~g~ 44 (304)
T PRK06522 1 MKIAILGAGAIGGLFGAALAQAGHDVTLVARRGAHLDALNENGL 44 (304)
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECChHHHHHHHHcCC
Confidence 58999999999999999999999999999997766655554444
|
|
| >cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins | Back alignment and domain information |
|---|
Probab=96.77 E-value=0.016 Score=45.63 Aligned_cols=95 Identities=15% Similarity=0.161 Sum_probs=58.2
Q ss_pred eEEEEcCChhhHHHHHHHHhCCC-EEEEEEeCchhhhhh-----------------------hh--CCc--eEEEccCCh
Q 017914 61 RMLILGMGFVGRIFAEKIKNQGW-VVSGTCTNVMKKKEL-----------------------EQ--SGF--DVHLFNANE 112 (364)
Q Consensus 61 ~vlVtGtG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~l-----------------------~~--~~~--~~~~~D~~~ 112 (364)
+|+|+|.|.+|+.+++.|...|. ++++++.+.-....+ .+ +.+ +.+..++..
T Consensus 1 ~VliiG~GglGs~ia~~L~~~Gv~~i~ivD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~~p~v~i~~~~~~~~~ 80 (143)
T cd01483 1 RVLLVGLGGLGSEIALNLARSGVGKITLIDFDTVELSNLNRQFLARQADIGKPKAEVAARRLNELNPGVNVTAVPEGISE 80 (143)
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCcCcchhhccccCChhHCCChHHHHHHHHHHHHCCCcEEEEEeeecCh
Confidence 58999999999999999999997 677777542111111 00 222 333344443
Q ss_pred hhH-HhhccCceeeEEEEecCCCCCCCChhhhHHHHHHHHhhcCCccEEEEEccce
Q 017914 113 TAL-MILTTLKNYTHLLVSIPPLEGTGDPMLKHGELLRSTLMNGHLQWLGYLSSTG 167 (364)
Q Consensus 113 ~~~-~~~~~~d~v~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~r~v~~Ss~~ 167 (364)
.+. ..+..+|.|+.+... ......+.+.+++.+++ +|..++.+
T Consensus 81 ~~~~~~~~~~diVi~~~d~-----------~~~~~~l~~~~~~~~i~-~i~~~~~g 124 (143)
T cd01483 81 DNLDDFLDGVDLVIDAIDN-----------IAVRRALNRACKELGIP-VIDAGGLG 124 (143)
T ss_pred hhHHHHhcCCCEEEECCCC-----------HHHHHHHHHHHHHcCCC-EEEEcCCC
Confidence 322 455777877776521 23345566777777754 77776654
|
This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. |
| >PRK14618 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.76 E-value=0.0042 Score=56.41 Aligned_cols=41 Identities=22% Similarity=0.144 Sum_probs=36.4
Q ss_pred CCeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCchhhhhhh
Q 017914 59 PNRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELE 99 (364)
Q Consensus 59 ~~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~ 99 (364)
+|+|.|+|+|.+|..++..|.+.|++|++.+|+++..+.+.
T Consensus 4 ~m~I~iIG~G~mG~~ia~~L~~~G~~V~~~~r~~~~~~~i~ 44 (328)
T PRK14618 4 GMRVAVLGAGAWGTALAVLAASKGVPVRLWARRPEFAAALA 44 (328)
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHH
Confidence 47999999999999999999999999999999877655554
|
|
| >PLN02712 arogenate dehydrogenase | Back alignment and domain information |
|---|
Probab=96.74 E-value=0.01 Score=58.94 Aligned_cols=37 Identities=22% Similarity=0.386 Sum_probs=33.3
Q ss_pred CCCCeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCch
Q 017914 57 QSPNRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVM 93 (364)
Q Consensus 57 ~~~~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~ 93 (364)
..+|+|.|+|.|.+|+.+++.|.+.|++|++.+|+..
T Consensus 50 ~~~~kIgIIG~G~mG~slA~~L~~~G~~V~~~dr~~~ 86 (667)
T PLN02712 50 TTQLKIAIIGFGNYGQFLAKTLISQGHTVLAHSRSDH 86 (667)
T ss_pred CCCCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 4568999999999999999999999999999999744
|
|
| >TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2 | Back alignment and domain information |
|---|
Probab=96.73 E-value=0.018 Score=48.14 Aligned_cols=36 Identities=17% Similarity=0.114 Sum_probs=31.7
Q ss_pred CCCCCeEEEEcCChhhHHHHHHHHhCCC-EEEEEEeC
Q 017914 56 WQSPNRMLILGMGFVGRIFAEKIKNQGW-VVSGTCTN 91 (364)
Q Consensus 56 ~~~~~~vlVtGtG~iG~~l~~~L~~~g~-~V~~~~r~ 91 (364)
.....+|+|+|.|.+|+.++..|.+.|. ++++++++
T Consensus 18 ~L~~~~V~IvG~GglGs~ia~~La~~Gvg~i~lvD~D 54 (200)
T TIGR02354 18 KLEQATVAICGLGGLGSNVAINLARAGIGKLILVDFD 54 (200)
T ss_pred HHhCCcEEEECcCHHHHHHHHHHHHcCCCEEEEECCC
Confidence 3456799999999999999999999998 68888876
|
Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter. |
| >PRK05690 molybdopterin biosynthesis protein MoeB; Provisional | Back alignment and domain information |
|---|
Probab=96.72 E-value=0.014 Score=50.48 Aligned_cols=99 Identities=10% Similarity=0.086 Sum_probs=60.7
Q ss_pred CCCCeEEEEcCChhhHHHHHHHHhCCC-EEEEEEeCchhhhh-----------------------hhh--C--CceEEEc
Q 017914 57 QSPNRMLILGMGFVGRIFAEKIKNQGW-VVSGTCTNVMKKKE-----------------------LEQ--S--GFDVHLF 108 (364)
Q Consensus 57 ~~~~~vlVtGtG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~-----------------------l~~--~--~~~~~~~ 108 (364)
....+|+|+|.|.+|+.+++.|...|. ++++++.+.-.... +.+ + .++.+..
T Consensus 30 L~~~~VliiG~GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~dvG~~Ka~~a~~~l~~lnp~v~i~~~~~ 109 (245)
T PRK05690 30 LKAARVLVVGLGGLGCAASQYLAAAGVGTLTLVDFDTVSLSNLQRQVLHDDATIGQPKVESARAALARINPHIAIETINA 109 (245)
T ss_pred hcCCeEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCEECcchhhhhhcCChhhCCChHHHHHHHHHHHHCCCCEEEEEec
Confidence 456799999999999999999999995 67666653211111 110 2 2344445
Q ss_pred cCChhhH-HhhccCceeeEEEEecCCCCCCCChhhhHHHHHHHHhhcCCccEEEEEccce
Q 017914 109 NANETAL-MILTTLKNYTHLLVSIPPLEGTGDPMLKHGELLRSTLMNGHLQWLGYLSSTG 167 (364)
Q Consensus 109 D~~~~~~-~~~~~~d~v~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~r~v~~Ss~~ 167 (364)
.++..+. ..+.++|.|+.+.. +. .....+.+++...++ .+|+.++.+
T Consensus 110 ~i~~~~~~~~~~~~DiVi~~~D---------~~--~~r~~ln~~~~~~~i-p~v~~~~~g 157 (245)
T PRK05690 110 RLDDDELAALIAGHDLVLDCTD---------NV--ATRNQLNRACFAAKK-PLVSGAAIR 157 (245)
T ss_pred cCCHHHHHHHHhcCCEEEecCC---------CH--HHHHHHHHHHHHhCC-EEEEeeecc
Confidence 5554433 45678888887752 11 223345566666665 477765443
|
|
| >PRK15461 NADH-dependent gamma-hydroxybutyrate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.71 E-value=0.0051 Score=54.95 Aligned_cols=64 Identities=17% Similarity=0.182 Sum_probs=49.2
Q ss_pred CeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCChhhHHhhccCceeeEEE
Q 017914 60 NRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETALMILTTLKNYTHLL 128 (364)
Q Consensus 60 ~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~~~~~~~d~v~~~~ 128 (364)
++|.|+|.|.+|..+++.|++.|++|++.+|++++.+.+...++... .++. +..+.+|.|+-+.
T Consensus 2 ~~Ig~IGlG~mG~~mA~~l~~~G~~V~v~d~~~~~~~~~~~~g~~~~----~s~~-~~~~~aDvVi~~v 65 (296)
T PRK15461 2 AAIAFIGLGQMGSPMASNLLKQGHQLQVFDVNPQAVDALVDKGATPA----ASPA-QAAAGAEFVITML 65 (296)
T ss_pred CeEEEEeeCHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHcCCccc----CCHH-HHHhcCCEEEEec
Confidence 58999999999999999999999999999999888776654443211 1122 4567788877766
|
|
| >PLN02353 probable UDP-glucose 6-dehydrogenase | Back alignment and domain information |
|---|
Probab=96.69 E-value=0.014 Score=55.37 Aligned_cols=73 Identities=12% Similarity=0.038 Sum_probs=52.0
Q ss_pred CCeEEEEcCChhhHHHHHHHHhC--CCEEEEEEeCchhhhhhhhCCceEEEccCCh-------------hhH-HhhccCc
Q 017914 59 PNRMLILGMGFVGRIFAEKIKNQ--GWVVSGTCTNVMKKKELEQSGFDVHLFNANE-------------TAL-MILTTLK 122 (364)
Q Consensus 59 ~~~vlVtGtG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~-------------~~~-~~~~~~d 122 (364)
+|+|.|+|.|++|..++..|.+. |++|++++.++++.+.+.+....+..-++.+ .+. ..+.++|
T Consensus 1 ~m~I~ViG~GyvGl~~A~~lA~~g~g~~V~gvD~~~~~v~~l~~g~~~~~e~gl~ell~~~~~~~l~~t~~~~~~i~~ad 80 (473)
T PLN02353 1 MVKICCIGAGYVGGPTMAVIALKCPDIEVVVVDISVPRIDAWNSDQLPIYEPGLDEVVKQCRGKNLFFSTDVEKHVAEAD 80 (473)
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCCCeEEEEECCHHHHHHHHcCCCccCCCCHHHHHHHhhcCCEEEEcCHHHHHhcCC
Confidence 47999999999999999999998 5889999999888777654332222211111 011 3567789
Q ss_pred eeeEEEEec
Q 017914 123 NYTHLLVSI 131 (364)
Q Consensus 123 ~v~~~~~~~ 131 (364)
+++.++...
T Consensus 81 vi~I~V~TP 89 (473)
T PLN02353 81 IVFVSVNTP 89 (473)
T ss_pred EEEEEeCCC
Confidence 888888654
|
|
| >TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent | Back alignment and domain information |
|---|
Probab=96.65 E-value=0.014 Score=52.64 Aligned_cols=65 Identities=11% Similarity=0.058 Sum_probs=45.3
Q ss_pred eEEEEc-CChhhHHHHHHHHhCCC-------EEEEEEeCchhhhhhhhCCceEEEccCChh------------h-HHhhc
Q 017914 61 RMLILG-MGFVGRIFAEKIKNQGW-------VVSGTCTNVMKKKELEQSGFDVHLFNANET------------A-LMILT 119 (364)
Q Consensus 61 ~vlVtG-tG~iG~~l~~~L~~~g~-------~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~------------~-~~~~~ 119 (364)
+|.|+| +|.||+.++..|...|. +++++++.+... ..+-+..|+.|. + ...++
T Consensus 1 ~V~IiGaaG~VG~~~a~~l~~~~~~~~~~e~el~LiD~~~~~~------~a~g~~~Dl~d~~~~~~~~~~~~~~~~~~~~ 74 (324)
T TIGR01758 1 RVVVTGAAGQIGYALLPMIARGRMLGKDQPIILHLLDIPPAMK------VLEGVVMELMDCAFPLLDGVVPTHDPAVAFT 74 (324)
T ss_pred CEEEECCCcHHHHHHHHHHHhccccCCCCccEEEEEecCCccc------ccceeEeehhcccchhcCceeccCChHHHhC
Confidence 589999 59999999999987543 688999864431 112223333332 1 26788
Q ss_pred cCceeeEEEEec
Q 017914 120 TLKNYTHLLVSI 131 (364)
Q Consensus 120 ~~d~v~~~~~~~ 131 (364)
++|.|+++++..
T Consensus 75 ~aDiVVitAG~~ 86 (324)
T TIGR01758 75 DVDVAILVGAFP 86 (324)
T ss_pred CCCEEEEcCCCC
Confidence 999999999864
|
This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography |
| >cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1 | Back alignment and domain information |
|---|
Probab=96.63 E-value=0.02 Score=47.82 Aligned_cols=102 Identities=11% Similarity=0.124 Sum_probs=61.5
Q ss_pred CCCCeEEEEcCChhhHHHHHHHHhCCC-EEEEEEeCchhhhh-----------------------hhh--CC--ceEEEc
Q 017914 57 QSPNRMLILGMGFVGRIFAEKIKNQGW-VVSGTCTNVMKKKE-----------------------LEQ--SG--FDVHLF 108 (364)
Q Consensus 57 ~~~~~vlVtGtG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~-----------------------l~~--~~--~~~~~~ 108 (364)
....+|+|+|.|.+|.++++.|...|. ++++++...-.... +.+ +. ++.+..
T Consensus 19 L~~s~VlIiG~gglG~evak~La~~GVg~i~lvD~d~ve~snL~rqfl~~~~diG~~Ka~a~~~~L~~lNp~v~i~~~~~ 98 (197)
T cd01492 19 LRSARILLIGLKGLGAEIAKNLVLSGIGSLTILDDRTVTEEDLGAQFLIPAEDLGQNRAEASLERLRALNPRVKVSVDTD 98 (197)
T ss_pred HHhCcEEEEcCCHHHHHHHHHHHHcCCCEEEEEECCcccHhhCCCCccccHHHcCchHHHHHHHHHHHHCCCCEEEEEec
Confidence 445799999987799999999999996 57777653211111 111 22 333333
Q ss_pred cCChhhHHhhccCceeeEEEEecCCCCCCCChhhhHHHHHHHHhhcCCccEEEEEccceeec
Q 017914 109 NANETALMILTTLKNYTHLLVSIPPLEGTGDPMLKHGELLRSTLMNGHLQWLGYLSSTGVYG 170 (364)
Q Consensus 109 D~~~~~~~~~~~~d~v~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~r~v~~Ss~~vy~ 170 (364)
.+.+.....+.++|.|+.+.. + ......+-+.|++.+++ +|+.++.+.||
T Consensus 99 ~~~~~~~~~~~~~dvVi~~~~---------~--~~~~~~ln~~c~~~~ip-~i~~~~~G~~G 148 (197)
T cd01492 99 DISEKPEEFFSQFDVVVATEL---------S--RAELVKINELCRKLGVK-FYATGVHGLFG 148 (197)
T ss_pred CccccHHHHHhCCCEEEECCC---------C--HHHHHHHHHHHHHcCCC-EEEEEecCCEE
Confidence 343222244577787775431 1 12334566777777764 88887766665
|
Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain. |
| >PRK07878 molybdopterin biosynthesis-like protein MoeZ; Validated | Back alignment and domain information |
|---|
Probab=96.63 E-value=0.013 Score=54.55 Aligned_cols=102 Identities=12% Similarity=0.076 Sum_probs=63.1
Q ss_pred CCCCeEEEEcCChhhHHHHHHHHhCCC-EEEEEEeCchhhhh-----------------------hhh--CC--ceEEEc
Q 017914 57 QSPNRMLILGMGFVGRIFAEKIKNQGW-VVSGTCTNVMKKKE-----------------------LEQ--SG--FDVHLF 108 (364)
Q Consensus 57 ~~~~~vlVtGtG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~-----------------------l~~--~~--~~~~~~ 108 (364)
....+|||+|.|.+|+.++..|...|. ++++++.+.-.... +.+ +. ++.+..
T Consensus 40 L~~~~VlviG~GGlGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~np~v~i~~~~~ 119 (392)
T PRK07878 40 LKNARVLVIGAGGLGSPTLLYLAAAGVGTLGIVEFDVVDESNLQRQVIHGQSDVGRSKAQSARDSIVEINPLVNVRLHEF 119 (392)
T ss_pred HhcCCEEEECCCHHHHHHHHHHHHcCCCeEEEECCCEecCcccccccccChhcCCChHHHHHHHHHHHhCCCcEEEEEec
Confidence 355799999999999999999999986 56666543211111 111 22 334445
Q ss_pred cCChhhH-HhhccCceeeEEEEecCCCCCCCChhhhHHHHHHHHhhcCCccEEEEEccceeec
Q 017914 109 NANETAL-MILTTLKNYTHLLVSIPPLEGTGDPMLKHGELLRSTLMNGHLQWLGYLSSTGVYG 170 (364)
Q Consensus 109 D~~~~~~-~~~~~~d~v~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~r~v~~Ss~~vy~ 170 (364)
.++..+. ..+.++|.|+.+.. +. .....+-++|...+++ ||+.+..+.+|
T Consensus 120 ~i~~~~~~~~~~~~D~Vvd~~d---------~~--~~r~~ln~~~~~~~~p-~v~~~~~g~~G 170 (392)
T PRK07878 120 RLDPSNAVELFSQYDLILDGTD---------NF--ATRYLVNDAAVLAGKP-YVWGSIYRFEG 170 (392)
T ss_pred cCChhHHHHHHhcCCEEEECCC---------CH--HHHHHHHHHHHHcCCC-EEEEEeccCEE
Confidence 5554433 56678888887652 11 2233455666666654 88887766655
|
|
| >COG3268 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=96.62 E-value=0.0044 Score=54.40 Aligned_cols=74 Identities=16% Similarity=0.236 Sum_probs=56.1
Q ss_pred CeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhh-CCceEEEccCChhhH--HhhccCceeeEEEEecCC
Q 017914 60 NRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQ-SGFDVHLFNANETAL--MILTTLKNYTHLLVSIPP 133 (364)
Q Consensus 60 ~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~-~~~~~~~~D~~~~~~--~~~~~~d~v~~~~~~~~~ 133 (364)
..++|-| +||.|..++++|.++|.+-.+..|+..+...+.. .+-++-.+++-++.. ..+...++|+|+++....
T Consensus 7 ~d~iiYGAtGy~G~lvae~l~~~g~~~aLAgRs~~kl~~l~~~LG~~~~~~p~~~p~~~~~~~~~~~VVlncvGPyt~ 84 (382)
T COG3268 7 YDIIIYGATGYAGGLVAEYLAREGLTAALAGRSSAKLDALRASLGPEAAVFPLGVPAALEAMASRTQVVLNCVGPYTR 84 (382)
T ss_pred eeEEEEccccchhHHHHHHHHHcCCchhhccCCHHHHHHHHHhcCccccccCCCCHHHHHHHHhcceEEEeccccccc
Confidence 4677779 9999999999999999999888999888776543 344444455555553 566888999999976443
|
|
| >PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate | Back alignment and domain information |
|---|
Probab=96.62 E-value=0.0035 Score=50.28 Aligned_cols=67 Identities=18% Similarity=0.249 Sum_probs=45.7
Q ss_pred eEEEEcCChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhC--------CceEEE-ccCChhhH-HhhccCceeeEEE
Q 017914 61 RMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQS--------GFDVHL-FNANETAL-MILTTLKNYTHLL 128 (364)
Q Consensus 61 ~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~--------~~~~~~-~D~~~~~~-~~~~~~d~v~~~~ 128 (364)
||.|+|+|..|.+++..|.++|++|++..|+++..+.+... ++..-. ..++ .+. .++++.|.|+..+
T Consensus 1 KI~ViGaG~~G~AlA~~la~~g~~V~l~~~~~~~~~~i~~~~~n~~~~~~~~l~~~i~~t-~dl~~a~~~ad~Iiiav 77 (157)
T PF01210_consen 1 KIAVIGAGNWGTALAALLADNGHEVTLWGRDEEQIEEINETRQNPKYLPGIKLPENIKAT-TDLEEALEDADIIIIAV 77 (157)
T ss_dssp EEEEESSSHHHHHHHHHHHHCTEEEEEETSCHHHHHHHHHHTSETTTSTTSBEETTEEEE-SSHHHHHTT-SEEEE-S
T ss_pred CEEEECcCHHHHHHHHHHHHcCCEEEEEeccHHHHHHHHHhCCCCCCCCCcccCcccccc-cCHHHHhCcccEEEecc
Confidence 68999999999999999999999999999998766555431 111110 0111 122 5778888887655
|
This family represents the N-terminal NAD-binding domain [].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0046168 glycerol-3-phosphate catabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 1YJ8_B 2PLA_A 1WPQ_B 1X0V_A 1X0X_A 1BG6_A 1TXG_B 1N1G_A 1M67_A 1JDJ_A .... |
| >PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis [] | Back alignment and domain information |
|---|
Probab=96.62 E-value=0.0041 Score=48.83 Aligned_cols=69 Identities=17% Similarity=0.046 Sum_probs=47.3
Q ss_pred CeEEEEc-CChhhHHHHHHHHhCC--CEEEEEEeCchhhhhh----hh----CCceEEEccCChhhHHhhccCceeeEEE
Q 017914 60 NRMLILG-MGFVGRIFAEKIKNQG--WVVSGTCTNVMKKKEL----EQ----SGFDVHLFNANETALMILTTLKNYTHLL 128 (364)
Q Consensus 60 ~~vlVtG-tG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~l----~~----~~~~~~~~D~~~~~~~~~~~~d~v~~~~ 128 (364)
|||.|+| +|.+|++++..|...+ .++++++++.+..... .. ....... .....+.++++|.|+.++
T Consensus 1 ~KV~IiGa~G~VG~~~a~~l~~~~l~~ei~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~i---~~~~~~~~~~aDivvita 77 (141)
T PF00056_consen 1 MKVAIIGAAGNVGSTLALLLAQQGLADEIVLIDINEDKAEGEALDLSHASAPLPSPVRI---TSGDYEALKDADIVVITA 77 (141)
T ss_dssp SEEEEESTTSHHHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHHHHHGSTEEEEE---EESSGGGGTTESEEEETT
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCCceEEeccCcccceeeehhhhhhhhhccccccc---ccccccccccccEEEEec
Confidence 6899999 5999999999999986 5899999986654321 11 1111111 111125788999999888
Q ss_pred Eec
Q 017914 129 VSI 131 (364)
Q Consensus 129 ~~~ 131 (364)
+..
T Consensus 78 g~~ 80 (141)
T PF00056_consen 78 GVP 80 (141)
T ss_dssp STS
T ss_pred ccc
Confidence 753
|
L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C .... |
| >TIGR00872 gnd_rel 6-phosphogluconate dehydrogenase (decarboxylating) | Back alignment and domain information |
|---|
Probab=96.61 E-value=0.0049 Score=55.11 Aligned_cols=66 Identities=14% Similarity=0.166 Sum_probs=48.7
Q ss_pred CeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCChhhH-HhhccCceeeEEE
Q 017914 60 NRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETAL-MILTTLKNYTHLL 128 (364)
Q Consensus 60 ~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~-~~~~~~d~v~~~~ 128 (364)
|+|.|+|.|.+|..+++.|.+.|++|++.+|++++.+.+.+.+.... .++ .+. ..+...|.|+.+.
T Consensus 1 M~Ig~IGlG~mG~~la~~L~~~g~~V~~~dr~~~~~~~l~~~g~~~~-~s~--~~~~~~~~~~dvIi~~v 67 (298)
T TIGR00872 1 MQLGLIGLGRMGANIVRRLAKRGHDCVGYDHDQDAVKAMKEDRTTGV-ANL--RELSQRLSAPRVVWVMV 67 (298)
T ss_pred CEEEEEcchHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCccc-CCH--HHHHhhcCCCCEEEEEc
Confidence 57999999999999999999999999999999888777665443221 111 121 3445678777765
|
This family resembles a larger family (gnd) of bacterial and eukaryotic 6-phosphogluconate dehydrogenases but differs from it by a deep split in a UPGMA similarity clustering tree and the lack of a central region of about 140 residues. Among complete genomes, it is found is found in Bacillus subtilis and Mycobacterium tuberculosis, both of which also contain gnd, and in Aquifex aeolicus. The protein from Methylobacillus flagellatus KT has been characterized as a decarboxylating 6-phosphogluconate dehydrogenase as part of an unusual formaldehyde oxidation cycle. In some sequenced organisms members of this family are the sole 6-phosphogluconate dehydrogenase present and are probably active in the pentose phosphate cycle. |
| >PRK07531 bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioesterase; Validated | Back alignment and domain information |
|---|
Probab=96.60 E-value=0.016 Score=55.70 Aligned_cols=40 Identities=15% Similarity=0.091 Sum_probs=35.5
Q ss_pred CCCeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCchhhhh
Q 017914 58 SPNRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMKKKE 97 (364)
Q Consensus 58 ~~~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~ 97 (364)
+.|+|.|+|+|.+|+.++..|++.|++|++.+++++..+.
T Consensus 3 ~i~kIavIG~G~MG~~iA~~la~~G~~V~v~D~~~~~~~~ 42 (495)
T PRK07531 3 MIMKAACIGGGVIGGGWAARFLLAGIDVAVFDPHPEAERI 42 (495)
T ss_pred CcCEEEEECcCHHHHHHHHHHHhCCCeEEEEeCCHHHHHH
Confidence 3468999999999999999999999999999998776544
|
|
| >TIGR00518 alaDH alanine dehydrogenase | Back alignment and domain information |
|---|
Probab=96.60 E-value=0.008 Score=55.37 Aligned_cols=72 Identities=15% Similarity=0.102 Sum_probs=52.0
Q ss_pred CCCeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCChhh-H-HhhccCceeeEEEE
Q 017914 58 SPNRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETA-L-MILTTLKNYTHLLV 129 (364)
Q Consensus 58 ~~~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~-~-~~~~~~d~v~~~~~ 129 (364)
...+|+|+|+|-+|...++.|...|.+|++++|++.+.+.+.......+..+..+.+ + +.+..+|+|+.++.
T Consensus 166 ~~~~VlViGaG~vG~~aa~~a~~lGa~V~v~d~~~~~~~~l~~~~g~~v~~~~~~~~~l~~~l~~aDvVI~a~~ 239 (370)
T TIGR00518 166 EPGDVTIIGGGVVGTNAAKMANGLGATVTILDINIDRLRQLDAEFGGRIHTRYSNAYEIEDAVKRADLLIGAVL 239 (370)
T ss_pred CCceEEEEcCCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHhcCceeEeccCCHHHHHHHHccCCEEEEccc
Confidence 346799999999999999999999999999999877655543221122333444433 2 56788999998763
|
The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP. |
| >cd01485 E1-1_like Ubiquitin activating enzyme (E1), repeat 1-like | Back alignment and domain information |
|---|
Probab=96.59 E-value=0.022 Score=47.55 Aligned_cols=103 Identities=12% Similarity=0.172 Sum_probs=62.0
Q ss_pred CCCCeEEEEcCChhhHHHHHHHHhCCC-EEEEEEeCchhhhh-------------------------hhh--CCc--eEE
Q 017914 57 QSPNRMLILGMGFVGRIFAEKIKNQGW-VVSGTCTNVMKKKE-------------------------LEQ--SGF--DVH 106 (364)
Q Consensus 57 ~~~~~vlVtGtG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~-------------------------l~~--~~~--~~~ 106 (364)
....+|+|+|.|.+|..+++.|...|. ++++++.+.-.... +.+ +.+ +.+
T Consensus 17 L~~s~VlviG~gglGsevak~L~~~GVg~i~lvD~d~ve~snl~rq~~~~~~~~~iG~~Ka~~~~~~L~~lNp~v~i~~~ 96 (198)
T cd01485 17 LRSAKVLIIGAGALGAEIAKNLVLAGIDSITIVDHRLVSTEDLGSNFFLDAEVSNSGMNRAAASYEFLQELNPNVKLSIV 96 (198)
T ss_pred HhhCcEEEECCCHHHHHHHHHHHHcCCCEEEEEECCcCChhcCcccEecccchhhcCchHHHHHHHHHHHHCCCCEEEEE
Confidence 445799999987799999999999995 57777654211111 111 233 333
Q ss_pred EccCC--hhhH-HhhccCceeeEEEEecCCCCCCCChhhhHHHHHHHHhhcCCccEEEEEccceeecC
Q 017914 107 LFNAN--ETAL-MILTTLKNYTHLLVSIPPLEGTGDPMLKHGELLRSTLMNGHLQWLGYLSSTGVYGH 171 (364)
Q Consensus 107 ~~D~~--~~~~-~~~~~~d~v~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~r~v~~Ss~~vy~~ 171 (364)
..++. ..+. ..+..+|.|+.+.. + ......+-+.+++.++ .+|+.++.+.||.
T Consensus 97 ~~~~~~~~~~~~~~~~~~dvVi~~~d---------~--~~~~~~ln~~c~~~~i-p~i~~~~~G~~G~ 152 (198)
T cd01485 97 EEDSLSNDSNIEEYLQKFTLVIATEE---------N--YERTAKVNDVCRKHHI-PFISCATYGLIGY 152 (198)
T ss_pred ecccccchhhHHHHHhCCCEEEECCC---------C--HHHHHHHHHHHHHcCC-CEEEEEeecCEEE
Confidence 33443 1111 45567777775431 1 2233445667777776 4888888777664
|
E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homol |
| >PRK15057 UDP-glucose 6-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.59 E-value=0.025 Score=52.48 Aligned_cols=39 Identities=23% Similarity=0.164 Sum_probs=33.8
Q ss_pred CeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCchhhhhhh
Q 017914 60 NRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELE 99 (364)
Q Consensus 60 ~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~ 99 (364)
|+|.|+|.|++|..++..|. .||+|+++++++++.+.+.
T Consensus 1 mkI~VIGlGyvGl~~A~~lA-~G~~VigvD~d~~kv~~l~ 39 (388)
T PRK15057 1 MKITISGTGYVGLSNGLLIA-QNHEVVALDILPSRVAMLN 39 (388)
T ss_pred CEEEEECCCHHHHHHHHHHH-hCCcEEEEECCHHHHHHHH
Confidence 57999999999999996665 5999999999998877665
|
|
| >PLN02383 aspartate semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=96.58 E-value=0.016 Score=52.71 Aligned_cols=69 Identities=14% Similarity=0.164 Sum_probs=40.9
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCC---EEEEEEeCchhhhhhhhCCceEEEccCChhhHHhhccCceeeEEE
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGW---VVSGTCTNVMKKKELEQSGFDVHLFNANETALMILTTLKNYTHLL 128 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~---~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~~~~~~~d~v~~~~ 128 (364)
.+.++|.|+| ||++|+.|++.|.+++| ++..+.........+...+..+...++.. ..+.++|.|+.++
T Consensus 5 ~~~~kVaVvGAtG~vG~eLlrlL~~~~hP~~~l~~las~rsaGk~~~~~~~~~~v~~~~~---~~~~~~D~vf~a~ 77 (344)
T PLN02383 5 ENGPSVAIVGVTGAVGQEFLSVLTDRDFPYSSLKMLASARSAGKKVTFEGRDYTVEELTE---DSFDGVDIALFSA 77 (344)
T ss_pred CCCCeEEEEcCCChHHHHHHHHHHhCCCCcceEEEEEccCCCCCeeeecCceeEEEeCCH---HHHcCCCEEEECC
Confidence 3457999999 99999999999999887 34333322111111111222333333332 3456789888655
|
|
| >cd01489 Uba2_SUMO Ubiquitin activating enzyme (E1) subunit UBA2 | Back alignment and domain information |
|---|
Probab=96.58 E-value=0.015 Score=51.96 Aligned_cols=98 Identities=13% Similarity=0.175 Sum_probs=61.2
Q ss_pred eEEEEcCChhhHHHHHHHHhCCC-EEEEEEeCchhhhhh-----------------------hh--C--CceEEEccCCh
Q 017914 61 RMLILGMGFVGRIFAEKIKNQGW-VVSGTCTNVMKKKEL-----------------------EQ--S--GFDVHLFNANE 112 (364)
Q Consensus 61 ~vlVtGtG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~l-----------------------~~--~--~~~~~~~D~~~ 112 (364)
+|||+|.|.+|..+++.|...|. ++++++.+.-....+ .+ + .++.+..++.+
T Consensus 1 kVlIVGaGGlG~EiaKnLal~Gvg~ItIvD~D~Ve~sNLnRQflf~~~dVGk~Kaevaa~~l~~lNp~v~V~~~~~~i~~ 80 (312)
T cd01489 1 KVLVVGAGGIGCELLKNLVLTGFGEIHIIDLDTIDLSNLNRQFLFRKKHVGKSKAQVAKEAVLSFNPNVKIVAYHANIKD 80 (312)
T ss_pred CEEEECCCHHHHHHHHHHHHhcCCeEEEEcCCCcchhhcCcCccCChhHcCcHHHHHHHHHHHHHCCCCeEEEEeccCCC
Confidence 58999999999999999999995 666666532211111 11 2 24455566665
Q ss_pred hh--HHhhccCceeeEEEEecCCCCCCCChhhhHHHHHHHHhhcCCccEEEEEccceeec
Q 017914 113 TA--LMILTTLKNYTHLLVSIPPLEGTGDPMLKHGELLRSTLMNGHLQWLGYLSSTGVYG 170 (364)
Q Consensus 113 ~~--~~~~~~~d~v~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~r~v~~Ss~~vy~ 170 (364)
.+ ...++++|.|+.+.. . ......+-+.+...++. +|..++.+.+|
T Consensus 81 ~~~~~~f~~~~DvVv~a~D---------n--~~ar~~in~~c~~~~ip-~I~~gt~G~~G 128 (312)
T cd01489 81 PDFNVEFFKQFDLVFNALD---------N--LAARRHVNKMCLAADVP-LIESGTTGFLG 128 (312)
T ss_pred ccchHHHHhcCCEEEECCC---------C--HHHHHHHHHHHHHCCCC-EEEEecCccee
Confidence 32 145677887777652 1 12344566667766654 88777766655
|
UBA2 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. UBA2 contains both the nucleotide-binding motif involved in adenylation and the catalytic cysteine involved in the thioester intermediate and Ublp transfer to E2. |
| >PF02558 ApbA: Ketopantoate reductase PanE/ApbA; InterPro: IPR013332 ApbA, the ketopantoate reductase enzyme 1 | Back alignment and domain information |
|---|
Probab=96.58 E-value=0.0047 Score=49.13 Aligned_cols=47 Identities=19% Similarity=0.458 Sum_probs=39.2
Q ss_pred EEEEcCChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEcc
Q 017914 62 MLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFN 109 (364)
Q Consensus 62 vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D 109 (364)
|+|.|+|.||..++..|.+.|++|.+++|.. ..+.+.+.++.+...+
T Consensus 1 I~I~G~GaiG~~~a~~L~~~g~~V~l~~r~~-~~~~~~~~g~~~~~~~ 47 (151)
T PF02558_consen 1 ILIIGAGAIGSLYAARLAQAGHDVTLVSRSP-RLEAIKEQGLTITGPD 47 (151)
T ss_dssp EEEESTSHHHHHHHHHHHHTTCEEEEEESHH-HHHHHHHHCEEEEETT
T ss_pred CEEECcCHHHHHHHHHHHHCCCceEEEEccc-cHHhhhheeEEEEecc
Confidence 7899999999999999999999999999998 6666665566555544
|
1.1.169 from EC of Salmonella typhimurium is required for the synthesis of thiamine via the alternative pyrimidine biosynthetic pathway []. Precursors to the pyrimidine moiety of thiamine are synthesized de novo by the purine biosynthetic pathway or the alternative pyrimidine biosynthetic (APB) pathway. The ApbA protein catalyzes the NADPH-specific reduction of ketopantoic acid to pantoic acid. This activity had previously been associated with the pantothenate biosynthetic gene panE []. ApbA and PanE are allelic [].; GO: 0008677 2-dehydropantoate 2-reductase activity, 0055114 oxidation-reduction process; PDB: 3EGO_B 3HWR_B 2QYT_A 1YJQ_A 1KS9_A 2OFP_A 1YON_A 3G17_E 3GHY_B 3I83_B .... |
| >PRK08762 molybdopterin biosynthesis protein MoeB; Validated | Back alignment and domain information |
|---|
Probab=96.56 E-value=0.021 Score=52.94 Aligned_cols=101 Identities=15% Similarity=0.057 Sum_probs=62.0
Q ss_pred CCCCeEEEEcCChhhHHHHHHHHhCCC-EEEEEEeCch-------------------hhhh----hhh--CCc--eEEEc
Q 017914 57 QSPNRMLILGMGFVGRIFAEKIKNQGW-VVSGTCTNVM-------------------KKKE----LEQ--SGF--DVHLF 108 (364)
Q Consensus 57 ~~~~~vlVtGtG~iG~~l~~~L~~~g~-~V~~~~r~~~-------------------~~~~----l~~--~~~--~~~~~ 108 (364)
....+|+|+|.|.+|+.++..|...|. ++++++++.- +.+. +.+ +.+ ..+..
T Consensus 133 l~~~~VlvvG~GG~Gs~ia~~La~~Gvg~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~v~~~~~ 212 (376)
T PRK08762 133 LLEARVLLIGAGGLGSPAALYLAAAGVGTLGIVDHDVVDRSNLQRQILHTEDRVGQPKVDSAAQRLAALNPDVQVEAVQE 212 (376)
T ss_pred HhcCcEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCEecchhhccccccchhhCCCcHHHHHHHHHHHHCCCCEEEEEec
Confidence 345789999999999999999999996 6888877521 1111 110 223 33333
Q ss_pred cCChhhH-HhhccCceeeEEEEecCCCCCCCChhhhHHHHHHHHhhcCCccEEEEEccceee
Q 017914 109 NANETAL-MILTTLKNYTHLLVSIPPLEGTGDPMLKHGELLRSTLMNGHLQWLGYLSSTGVY 169 (364)
Q Consensus 109 D~~~~~~-~~~~~~d~v~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~r~v~~Ss~~vy 169 (364)
.+++.+. ..+.++|.|+.+... . .....+.+++.+.++ .+|+.+..+.+
T Consensus 213 ~~~~~~~~~~~~~~D~Vv~~~d~---------~--~~r~~ln~~~~~~~i-p~i~~~~~g~~ 262 (376)
T PRK08762 213 RVTSDNVEALLQDVDVVVDGADN---------F--PTRYLLNDACVKLGK-PLVYGAVFRFE 262 (376)
T ss_pred cCChHHHHHHHhCCCEEEECCCC---------H--HHHHHHHHHHHHcCC-CEEEEEeccCE
Confidence 4443333 456778888876532 1 123345666777775 48877654433
|
|
| >PRK05600 thiamine biosynthesis protein ThiF; Validated | Back alignment and domain information |
|---|
Probab=96.56 E-value=0.019 Score=52.88 Aligned_cols=103 Identities=11% Similarity=0.035 Sum_probs=64.0
Q ss_pred CCCCCeEEEEcCChhhHHHHHHHHhCCC-EEEEEEeCchhhhhh-----------------------hh--C--CceEEE
Q 017914 56 WQSPNRMLILGMGFVGRIFAEKIKNQGW-VVSGTCTNVMKKKEL-----------------------EQ--S--GFDVHL 107 (364)
Q Consensus 56 ~~~~~~vlVtGtG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~l-----------------------~~--~--~~~~~~ 107 (364)
.....+|+|+|.|.+|..++..|...|. ++++++.+.-....+ .+ + .++.+.
T Consensus 38 ~l~~~~VliiG~GglG~~v~~~La~~Gvg~i~ivD~D~ve~sNL~RQ~l~~~~diG~~Ka~~~~~~l~~~np~v~i~~~~ 117 (370)
T PRK05600 38 RLHNARVLVIGAGGLGCPAMQSLASAGVGTITLIDDDTVDVSNIHRQILFGASDVGRPKVEVAAERLKEIQPDIRVNALR 117 (370)
T ss_pred HhcCCcEEEECCCHHHHHHHHHHHHcCCCEEEEEeCCEEccccccccccCChhHCCCHHHHHHHHHHHHHCCCCeeEEee
Confidence 3456799999999999999999999995 787777642111111 10 2 244455
Q ss_pred ccCChhhH-HhhccCceeeEEEEecCCCCCCCChhhhHHHHHHHHhhcCCccEEEEEccceeec
Q 017914 108 FNANETAL-MILTTLKNYTHLLVSIPPLEGTGDPMLKHGELLRSTLMNGHLQWLGYLSSTGVYG 170 (364)
Q Consensus 108 ~D~~~~~~-~~~~~~d~v~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~r~v~~Ss~~vy~ 170 (364)
..++..+. ..++++|.|+.+... . .....+-+++...++. +|+.+..+.+|
T Consensus 118 ~~i~~~~~~~~~~~~DlVid~~Dn---------~--~~r~~in~~~~~~~iP-~v~~~~~g~~G 169 (370)
T PRK05600 118 ERLTAENAVELLNGVDLVLDGSDS---------F--ATKFLVADAAEITGTP-LVWGTVLRFHG 169 (370)
T ss_pred eecCHHHHHHHHhCCCEEEECCCC---------H--HHHHHHHHHHHHcCCC-EEEEEEecCEE
Confidence 55554333 567888888776532 1 2233455666666654 77776544443
|
|
| >COG1893 ApbA Ketopantoate reductase [Coenzyme metabolism] | Back alignment and domain information |
|---|
Probab=96.54 E-value=0.0086 Score=53.61 Aligned_cols=68 Identities=16% Similarity=0.253 Sum_probs=49.2
Q ss_pred CeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccC--ChhhH-----HhhccCceeeEEE
Q 017914 60 NRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNA--NETAL-----MILTTLKNYTHLL 128 (364)
Q Consensus 60 ~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~--~~~~~-----~~~~~~d~v~~~~ 128 (364)
|+|+|+|+|-+|+.+.-.|.+.|++|+.+.|++. .+.+.+.++.+...+- ..+.. .....+|.|+-..
T Consensus 1 mkI~IlGaGAvG~l~g~~L~~~g~~V~~~~R~~~-~~~l~~~GL~i~~~~~~~~~~~~~~~~~~~~~~~Dlviv~v 75 (307)
T COG1893 1 MKILILGAGAIGSLLGARLAKAGHDVTLLVRSRR-LEALKKKGLRIEDEGGNFTTPVVAATDAEALGPADLVIVTV 75 (307)
T ss_pred CeEEEECCcHHHHHHHHHHHhCCCeEEEEecHHH-HHHHHhCCeEEecCCCccccccccccChhhcCCCCEEEEEe
Confidence 6899999999999999999999999999999876 5666656666555444 11111 3334567766655
|
|
| >cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy) | Back alignment and domain information |
|---|
Probab=96.52 E-value=0.016 Score=53.81 Aligned_cols=66 Identities=17% Similarity=0.170 Sum_probs=50.8
Q ss_pred CCCCeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCChhhHHhhccCceeeEEE
Q 017914 57 QSPNRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETALMILTTLKNYTHLL 128 (364)
Q Consensus 57 ~~~~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~~~~~~~d~v~~~~ 128 (364)
..+++|+|+|.|.||..+++.+...|.+|++.++++.+.......++..+. .+ +.+.++|+|+.+.
T Consensus 200 l~GktVvViG~G~IG~~va~~ak~~Ga~ViV~d~d~~R~~~A~~~G~~~~~-----~~-e~v~~aDVVI~at 265 (413)
T cd00401 200 IAGKVAVVAGYGDVGKGCAQSLRGQGARVIVTEVDPICALQAAMEGYEVMT-----ME-EAVKEGDIFVTTT 265 (413)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECChhhHHHHHhcCCEEcc-----HH-HHHcCCCEEEECC
Confidence 457899999999999999999999999999999987776555555654432 12 4556788887654
|
The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+. |
| >PRK07502 cyclohexadienyl dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=96.51 E-value=0.0083 Score=53.96 Aligned_cols=68 Identities=15% Similarity=0.263 Sum_probs=47.8
Q ss_pred CCCeEEEEcCChhhHHHHHHHHhCCC--EEEEEEeCchhhhhhhhCCceEEEccCChhhHHhhccCceeeEEE
Q 017914 58 SPNRMLILGMGFVGRIFAEKIKNQGW--VVSGTCTNVMKKKELEQSGFDVHLFNANETALMILTTLKNYTHLL 128 (364)
Q Consensus 58 ~~~~vlVtGtG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~~~~~~~d~v~~~~ 128 (364)
+.++|.|+|+|.+|..++..|.+.|+ +|++++|+++........++..... .+.+ ..+.++|.|+.++
T Consensus 5 ~~~~I~IIG~G~mG~sla~~l~~~g~~~~V~~~dr~~~~~~~a~~~g~~~~~~--~~~~-~~~~~aDvViiav 74 (307)
T PRK07502 5 LFDRVALIGIGLIGSSLARAIRRLGLAGEIVGADRSAETRARARELGLGDRVT--TSAA-EAVKGADLVILCV 74 (307)
T ss_pred CCcEEEEEeeCHHHHHHHHHHHhcCCCcEEEEEECCHHHHHHHHhCCCCceec--CCHH-HHhcCCCEEEECC
Confidence 34789999999999999999999985 8999999877655544333311111 1111 4567788887766
|
|
| >PLN02688 pyrroline-5-carboxylate reductase | Back alignment and domain information |
|---|
Probab=96.47 E-value=0.011 Score=51.92 Aligned_cols=64 Identities=13% Similarity=0.184 Sum_probs=48.4
Q ss_pred CeEEEEcCChhhHHHHHHHHhCCC----EEEEE-EeCchhhhhhhhCCceEEEccCChhhHHhhccCceeeEEE
Q 017914 60 NRMLILGMGFVGRIFAEKIKNQGW----VVSGT-CTNVMKKKELEQSGFDVHLFNANETALMILTTLKNYTHLL 128 (364)
Q Consensus 60 ~~vlVtGtG~iG~~l~~~L~~~g~----~V~~~-~r~~~~~~~l~~~~~~~~~~D~~~~~~~~~~~~d~v~~~~ 128 (364)
|+|.++|.|.+|..+++.|++.|+ +|++. +|++++...+...++... .+.. +..+++|.|+.+.
T Consensus 1 ~kI~~IG~G~mG~a~a~~L~~~g~~~~~~i~v~~~r~~~~~~~~~~~g~~~~----~~~~-e~~~~aDvVil~v 69 (266)
T PLN02688 1 FRVGFIGAGKMAEAIARGLVASGVVPPSRISTADDSNPARRDVFQSLGVKTA----ASNT-EVVKSSDVIILAV 69 (266)
T ss_pred CeEEEECCcHHHHHHHHHHHHCCCCCcceEEEEeCCCHHHHHHHHHcCCEEe----CChH-HHHhcCCEEEEEE
Confidence 679999999999999999999998 89988 888777666554555432 1111 4566788888776
|
|
| >cd00704 MDH Malate dehydrogenase | Back alignment and domain information |
|---|
Probab=96.47 E-value=0.012 Score=52.98 Aligned_cols=63 Identities=10% Similarity=-0.023 Sum_probs=45.3
Q ss_pred eEEEEc-CChhhHHHHHHHHhCC-------CEEEEEEeCc--hhhhhhhhCCceEEEccCChh-------------hHHh
Q 017914 61 RMLILG-MGFVGRIFAEKIKNQG-------WVVSGTCTNV--MKKKELEQSGFDVHLFNANET-------------ALMI 117 (364)
Q Consensus 61 ~vlVtG-tG~iG~~l~~~L~~~g-------~~V~~~~r~~--~~~~~l~~~~~~~~~~D~~~~-------------~~~~ 117 (364)
+|.|+| +|.||+.++..|...| +++++++++. +.. +....|+.|. ....
T Consensus 2 KV~IiGAaG~VG~~~a~~L~~~~~~~~~~~~~l~L~Di~~~~~~~--------~g~~~Dl~d~~~~~~~~~~i~~~~~~~ 73 (323)
T cd00704 2 HVLITGAAGQIGYNLLFLIASGELFGDDQPVILHLLDIPPAMKAL--------EGVVMELQDCAFPLLKGVVITTDPEEA 73 (323)
T ss_pred EEEEECCCcHHHHHHHHHHHhCCccCCCCceEEEEEecCCccCcc--------ceeeeehhhhcccccCCcEEecChHHH
Confidence 799999 6999999999998865 2588898875 321 2223333332 2267
Q ss_pred hccCceeeEEEEec
Q 017914 118 LTTLKNYTHLLVSI 131 (364)
Q Consensus 118 ~~~~d~v~~~~~~~ 131 (364)
++++|+|+|+++..
T Consensus 74 ~~~aDiVVitAG~~ 87 (323)
T cd00704 74 FKDVDVAILVGAFP 87 (323)
T ss_pred hCCCCEEEEeCCCC
Confidence 89999999999764
|
Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >PRK08644 thiamine biosynthesis protein ThiF; Provisional | Back alignment and domain information |
|---|
Probab=96.47 E-value=0.022 Score=48.04 Aligned_cols=35 Identities=17% Similarity=0.127 Sum_probs=30.1
Q ss_pred CCCCeEEEEcCChhhHHHHHHHHhCCC-EEEEEEeC
Q 017914 57 QSPNRMLILGMGFVGRIFAEKIKNQGW-VVSGTCTN 91 (364)
Q Consensus 57 ~~~~~vlVtGtG~iG~~l~~~L~~~g~-~V~~~~r~ 91 (364)
....+|+|+|.|.+|+.++..|...|. ++++++.+
T Consensus 26 L~~~~V~ViG~GglGs~ia~~La~~Gvg~i~lvD~D 61 (212)
T PRK08644 26 LKKAKVGIAGAGGLGSNIAVALARSGVGNLKLVDFD 61 (212)
T ss_pred HhCCCEEEECcCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 455799999999999999999999996 57777765
|
|
| >KOG0172 consensus Lysine-ketoglutarate reductase/saccharopine dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.46 E-value=0.0055 Score=54.92 Aligned_cols=70 Identities=20% Similarity=0.274 Sum_probs=58.3
Q ss_pred CCeEEEEcCChhhHHHHHHHHhCC-CEEEEEEeCchhhhhhhh-CCceEEEccCChhhH---HhhccCceeeEEE
Q 017914 59 PNRMLILGMGFVGRIFAEKIKNQG-WVVSGTCTNVMKKKELEQ-SGFDVHLFNANETAL---MILTTLKNYTHLL 128 (364)
Q Consensus 59 ~~~vlVtGtG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~l~~-~~~~~~~~D~~~~~~---~~~~~~d~v~~~~ 128 (364)
+++||+.|+||+.+-++..|.+++ .+|++.+|...+.+.+-. .+++.+..|+.+.+. ...+..|.++-+.
T Consensus 2 ~~~vlllgsg~v~~p~~d~ls~~~dv~vtva~~~~~~~~~~~~~~~~~av~ldv~~~~~~L~~~v~~~D~viSLl 76 (445)
T KOG0172|consen 2 KKGVLLLGSGFVSRPVADFLSRKKDVNVTVASRTLKDAEALVKGINIKAVSLDVADEELALRKEVKPLDLVISLL 76 (445)
T ss_pred CcceEEecCccccchHHHHHhhcCCceEEEehhhHHHHHHHhcCCCccceEEEccchHHHHHhhhcccceeeeec
Confidence 578999999999999999999885 689999998877776643 568999999999773 5667788887766
|
|
| >cd01484 E1-2_like Ubiquitin activating enzyme (E1), repeat 2-like | Back alignment and domain information |
|---|
Probab=96.46 E-value=0.025 Score=48.37 Aligned_cols=98 Identities=11% Similarity=0.106 Sum_probs=59.5
Q ss_pred eEEEEcCChhhHHHHHHHHhCCC-EEEEEEeCchhhhhhh-----------------------h--C--CceEEEccCCh
Q 017914 61 RMLILGMGFVGRIFAEKIKNQGW-VVSGTCTNVMKKKELE-----------------------Q--S--GFDVHLFNANE 112 (364)
Q Consensus 61 ~vlVtGtG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~l~-----------------------~--~--~~~~~~~D~~~ 112 (364)
+|||+|.|.+|..+++.|...|. ++++++.+.-....+. + + ++..+..++.+
T Consensus 1 kVlvvG~GGlG~eilk~La~~Gvg~i~ivD~D~Ve~sNLnRQflf~~~dvGk~Ka~va~~~l~~~np~v~i~~~~~~i~~ 80 (234)
T cd01484 1 KVLLVGAGGIGCELLKNLALMGFGQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKSEVAAEAVNDRNPNCKVVPYQNKVGP 80 (234)
T ss_pred CEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCEEcchhhccccCCChhhCChHHHHHHHHHHHHHCCCCEEEEEeccCCh
Confidence 58999999999999999999985 6666665432111110 0 2 24455556643
Q ss_pred hh---HHhhccCceeeEEEEecCCCCCCCChhhhHHHHHHHHhhcCCccEEEEEccceeec
Q 017914 113 TA---LMILTTLKNYTHLLVSIPPLEGTGDPMLKHGELLRSTLMNGHLQWLGYLSSTGVYG 170 (364)
Q Consensus 113 ~~---~~~~~~~d~v~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~r~v~~Ss~~vy~ 170 (364)
.+ ...++++|.|+.+... ......+-+.+...++ .+|..++.+.+|
T Consensus 81 ~~~~~~~f~~~~DvVi~a~Dn-----------~~aR~~ln~~c~~~~i-plI~~g~~G~~G 129 (234)
T cd01484 81 EQDFNDTFFEQFHIIVNALDN-----------IIARRYVNGMLIFLIV-PLIESGTEGFKG 129 (234)
T ss_pred hhhchHHHHhCCCEEEECCCC-----------HHHHHHHHHHHHHcCC-CEEEEcccCCce
Confidence 22 1455778877776421 1223445566666665 488777766554
|
E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homologou |
| >cd01487 E1_ThiF_like E1_ThiF_like | Back alignment and domain information |
|---|
Probab=96.46 E-value=0.023 Score=46.41 Aligned_cols=32 Identities=22% Similarity=0.181 Sum_probs=28.3
Q ss_pred eEEEEcCChhhHHHHHHHHhCCC-EEEEEEeCc
Q 017914 61 RMLILGMGFVGRIFAEKIKNQGW-VVSGTCTNV 92 (364)
Q Consensus 61 ~vlVtGtG~iG~~l~~~L~~~g~-~V~~~~r~~ 92 (364)
+|+|+|.|.+|+.+++.|.+.|. +++.++.+.
T Consensus 1 ~VlViG~GglGs~ia~~La~~Gvg~i~lvD~D~ 33 (174)
T cd01487 1 KVGIAGAGGLGSNIAVLLARSGVGNLKLVDFDV 33 (174)
T ss_pred CEEEECcCHHHHHHHHHHHHcCCCeEEEEeCCE
Confidence 58999999999999999999997 588888754
|
Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown. |
| >PRK06719 precorrin-2 dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=96.45 E-value=0.0083 Score=48.03 Aligned_cols=35 Identities=20% Similarity=0.190 Sum_probs=31.6
Q ss_pred CCCCCeEEEEcCChhhHHHHHHHHhCCCEEEEEEe
Q 017914 56 WQSPNRMLILGMGFVGRIFAEKIKNQGWVVSGTCT 90 (364)
Q Consensus 56 ~~~~~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r 90 (364)
...+++|+|+|.|-+|...++.|++.|++|++++.
T Consensus 10 ~l~~~~vlVvGGG~va~rka~~Ll~~ga~V~VIsp 44 (157)
T PRK06719 10 NLHNKVVVIIGGGKIAYRKASGLKDTGAFVTVVSP 44 (157)
T ss_pred EcCCCEEEEECCCHHHHHHHHHHHhCCCEEEEEcC
Confidence 35678999999999999999999999999999853
|
|
| >PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ] | Back alignment and domain information |
|---|
Probab=96.44 E-value=0.019 Score=43.94 Aligned_cols=33 Identities=33% Similarity=0.511 Sum_probs=27.4
Q ss_pred CeEEEEc-CChhhHHHHHHHHh-CCCEEEEEE-eCc
Q 017914 60 NRMLILG-MGFVGRIFAEKIKN-QGWVVSGTC-TNV 92 (364)
Q Consensus 60 ~~vlVtG-tG~iG~~l~~~L~~-~g~~V~~~~-r~~ 92 (364)
|+|.|.| +|.+|+.+++.+.+ .|+++.+.. |+.
T Consensus 1 mrV~i~G~~GrMG~~i~~~i~~~~~~~lv~~v~~~~ 36 (124)
T PF01113_consen 1 MRVGIVGASGRMGRAIAEAILESPGFELVGAVDRKP 36 (124)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHSTTEEEEEEEETTT
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCCcEEEEEEecCC
Confidence 5899999 79999999999999 688877654 444
|
In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A .... |
| >PRK06718 precorrin-2 dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=96.44 E-value=0.014 Score=48.90 Aligned_cols=68 Identities=13% Similarity=0.003 Sum_probs=45.1
Q ss_pred CCCCeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCchh-hhhhhh-CCceEEEccCChhhHHhhccCceeeEE
Q 017914 57 QSPNRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMK-KKELEQ-SGFDVHLFNANETALMILTTLKNYTHL 127 (364)
Q Consensus 57 ~~~~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~~-~~~l~~-~~~~~~~~D~~~~~~~~~~~~d~v~~~ 127 (364)
..+++|||+|+|-+|...++.|++.|++|+++++...+ ...+.. ..+.+..-++.. ..+.++|.|+-+
T Consensus 8 l~~k~vLVIGgG~va~~ka~~Ll~~ga~V~VIs~~~~~~l~~l~~~~~i~~~~~~~~~---~~l~~adlViaa 77 (202)
T PRK06718 8 LSNKRVVIVGGGKVAGRRAITLLKYGAHIVVISPELTENLVKLVEEGKIRWKQKEFEP---SDIVDAFLVIAA 77 (202)
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCHHHHHHHhCCCEEEEecCCCh---hhcCCceEEEEc
Confidence 56789999999999999999999999999999875422 122222 234443333222 345566655543
|
|
| >PRK08057 cobalt-precorrin-6x reductase; Reviewed | Back alignment and domain information |
|---|
Probab=96.44 E-value=0.033 Score=48.11 Aligned_cols=93 Identities=12% Similarity=0.004 Sum_probs=66.9
Q ss_pred CCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCCh-hhH-Hhh--ccCceeeEEEEecC
Q 017914 58 SPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANE-TAL-MIL--TTLKNYTHLLVSIP 132 (364)
Q Consensus 58 ~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~-~~~-~~~--~~~d~v~~~~~~~~ 132 (364)
++++|||+| |+= |+.|++.|.+.|+.|++-+-..... ....++.++.+-+.+ .++ ..+ ++++.|+...+
T Consensus 1 ~~~~IlvlgGT~e-gr~la~~L~~~g~~v~~Svat~~g~--~~~~~~~v~~G~l~~~~~l~~~l~~~~i~~VIDATH--- 74 (248)
T PRK08057 1 MMPRILLLGGTSE-ARALARALAAAGVDIVLSLAGRTGG--PADLPGPVRVGGFGGAEGLAAYLREEGIDLVIDATH--- 74 (248)
T ss_pred CCceEEEEechHH-HHHHHHHHHhCCCeEEEEEccCCCC--cccCCceEEECCCCCHHHHHHHHHHCCCCEEEECCC---
Confidence 467899997 664 8999999999999888876655333 223567888888844 444 333 57788887653
Q ss_pred CCCCCCChhhhHHHHHHHHhhcCCccEEEE
Q 017914 133 PLEGTGDPMLKHGELLRSTLMNGHLQWLGY 162 (364)
Q Consensus 133 ~~~~~~~~~~~~~~~l~~a~~~~~~~r~v~ 162 (364)
........|+.++|++.+++.+=|
T Consensus 75 ------PfA~~is~~a~~ac~~~~ipyiR~ 98 (248)
T PRK08057 75 ------PYAAQISANAAAACRALGIPYLRL 98 (248)
T ss_pred ------ccHHHHHHHHHHHHHHhCCcEEEE
Confidence 234567789999999998875544
|
|
| >cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases | Back alignment and domain information |
|---|
Probab=96.43 E-value=0.016 Score=52.04 Aligned_cols=67 Identities=19% Similarity=0.101 Sum_probs=48.4
Q ss_pred CeEEEEcCChhhHHHHHHHHhCC--CEEEEEEeCchhhhhhhh----------CCceEEEccCChhhHHhhccCceeeEE
Q 017914 60 NRMLILGMGFVGRIFAEKIKNQG--WVVSGTCTNVMKKKELEQ----------SGFDVHLFNANETALMILTTLKNYTHL 127 (364)
Q Consensus 60 ~~vlVtGtG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~l~~----------~~~~~~~~D~~~~~~~~~~~~d~v~~~ 127 (364)
++|.|+|+|.+|+.++..|+..| ++|++++|+.+....+.. ....+.. .+...+.++|.|+.+
T Consensus 1 ~kI~IIGaG~vG~~~a~~l~~~g~~~ei~l~D~~~~~~~~~a~dL~~~~~~~~~~~~i~~-----~~~~~l~~aDIVIit 75 (306)
T cd05291 1 RKVVIIGAGHVGSSFAYSLVNQGIADELVLIDINEEKAEGEALDLEDALAFLPSPVKIKA-----GDYSDCKDADIVVIT 75 (306)
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHhHhhHHHHhhccCCCeEEEc-----CCHHHhCCCCEEEEc
Confidence 47999999999999999999998 689999998776543321 1111111 112457899999998
Q ss_pred EEec
Q 017914 128 LVSI 131 (364)
Q Consensus 128 ~~~~ 131 (364)
++..
T Consensus 76 ag~~ 79 (306)
T cd05291 76 AGAP 79 (306)
T ss_pred cCCC
Confidence 8753
|
L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine |
| >PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=96.42 E-value=0.024 Score=50.92 Aligned_cols=38 Identities=13% Similarity=0.141 Sum_probs=34.1
Q ss_pred CCeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCchhhh
Q 017914 59 PNRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMKKK 96 (364)
Q Consensus 59 ~~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~~~~ 96 (364)
.++|.|+|+|.+|+.++..|+..|++|++.+++++..+
T Consensus 7 i~~VaVIGaG~MG~giA~~~a~aG~~V~l~D~~~~~~~ 44 (321)
T PRK07066 7 IKTFAAIGSGVIGSGWVARALAHGLDVVAWDPAPGAEA 44 (321)
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCCeEEEEeCCHHHHH
Confidence 36899999999999999999999999999999876543
|
|
| >TIGR01505 tartro_sem_red 2-hydroxy-3-oxopropionate reductase | Back alignment and domain information |
|---|
Probab=96.41 E-value=0.0077 Score=53.72 Aligned_cols=63 Identities=13% Similarity=0.214 Sum_probs=48.3
Q ss_pred eEEEEcCChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCChhhHHhhccCceeeEEE
Q 017914 61 RMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETALMILTTLKNYTHLL 128 (364)
Q Consensus 61 ~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~~~~~~~d~v~~~~ 128 (364)
+|.|+|.|.+|+.+++.|.+.|++|++.+|++++.+.+...+.... .+.. +.++++|.|+-++
T Consensus 1 ~IgvIG~G~mG~~iA~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~----~~~~-~~~~~aDivi~~v 63 (291)
T TIGR01505 1 KVGFIGLGIMGSPMSINLAKAGYQLHVTTIGPEVADELLAAGAVTA----ETAR-QVTEQADVIFTMV 63 (291)
T ss_pred CEEEEEecHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHCCCccc----CCHH-HHHhcCCEEEEec
Confidence 4789999999999999999999999999999887766654443211 1221 5667888888876
|
This model represents 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60), also called tartronate semialdehyde reductase. It follows glyoxylate carboligase and precedes glycerate kinase in D-glycerate pathway of glyoxylate degradation. The eventual product, 3-phosphoglycerate, is an intermediate of glycolysis and is readily metabolized. Tartronic semialdehyde, the substrate of this enzyme, may also come from other pathways, such as D-glucarate catabolism. |
| >PLN00203 glutamyl-tRNA reductase | Back alignment and domain information |
|---|
Probab=96.41 E-value=0.0098 Score=57.00 Aligned_cols=72 Identities=11% Similarity=0.192 Sum_probs=52.6
Q ss_pred CCCCeEEEEcCChhhHHHHHHHHhCCC-EEEEEEeCchhhhhhhhC--CceEEEccCChhhHHhhccCceeeEEEE
Q 017914 57 QSPNRMLILGMGFVGRIFAEKIKNQGW-VVSGTCTNVMKKKELEQS--GFDVHLFNANETALMILTTLKNYTHLLV 129 (364)
Q Consensus 57 ~~~~~vlVtGtG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~l~~~--~~~~~~~D~~~~~~~~~~~~d~v~~~~~ 129 (364)
..+++|+|+|+|.+|+.+++.|...|. +|+++.|+.++...+... +..+...++.+.. ..+.++|+|+.+.+
T Consensus 264 l~~kkVlVIGAG~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~~~g~~i~~~~~~dl~-~al~~aDVVIsAT~ 338 (519)
T PLN00203 264 HASARVLVIGAGKMGKLLVKHLVSKGCTKMVVVNRSEERVAALREEFPDVEIIYKPLDEML-ACAAEADVVFTSTS 338 (519)
T ss_pred CCCCEEEEEeCHHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHhCCCceEeecHhhHH-HHHhcCCEEEEccC
Confidence 446899999999999999999999996 799999998887666432 3322222333322 56788899887653
|
|
| >COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only] | Back alignment and domain information |
|---|
Probab=96.40 E-value=0.024 Score=51.37 Aligned_cols=93 Identities=18% Similarity=0.136 Sum_probs=60.7
Q ss_pred CCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCChhhH-----Hhh--ccCceeeEEEEe
Q 017914 59 PNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETAL-----MIL--TTLKNYTHLLVS 130 (364)
Q Consensus 59 ~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~-----~~~--~~~d~v~~~~~~ 130 (364)
+.+|||+| +|.+|...++.+...|..+++.+.+.++.+.+.+.+...+. |+.+.++ +.. +++|.|+...+.
T Consensus 143 g~~VLV~gaaGgVG~~aiQlAk~~G~~~v~~~~s~~k~~~~~~lGAd~vi-~y~~~~~~~~v~~~t~g~gvDvv~D~vG~ 221 (326)
T COG0604 143 GETVLVHGAAGGVGSAAIQLAKALGATVVAVVSSSEKLELLKELGADHVI-NYREEDFVEQVRELTGGKGVDVVLDTVGG 221 (326)
T ss_pred CCEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHhcCCCEEE-cCCcccHHHHHHHHcCCCCceEEEECCCH
Confidence 68999998 99999999999999997777777776666666666654332 3444333 222 358888887642
Q ss_pred cCCCCCCCChhhhHHHHHHHHhhcCCccEEEEEccc
Q 017914 131 IPPLEGTGDPMLKHGELLRSTLMNGHLQWLGYLSST 166 (364)
Q Consensus 131 ~~~~~~~~~~~~~~~~~l~~a~~~~~~~r~v~~Ss~ 166 (364)
......+.+++.. .+++.+...
T Consensus 222 ------------~~~~~~l~~l~~~--G~lv~ig~~ 243 (326)
T COG0604 222 ------------DTFAASLAALAPG--GRLVSIGAL 243 (326)
T ss_pred ------------HHHHHHHHHhccC--CEEEEEecC
Confidence 1223344555554 378776543
|
|
| >PRK06130 3-hydroxybutyryl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=96.39 E-value=0.031 Score=50.36 Aligned_cols=40 Identities=18% Similarity=0.112 Sum_probs=35.2
Q ss_pred CCeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCchhhhhh
Q 017914 59 PNRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMKKKEL 98 (364)
Q Consensus 59 ~~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l 98 (364)
.++|.|+|+|.+|..++..|++.|++|++++++.+....+
T Consensus 4 ~~~I~vIGaG~mG~~iA~~l~~~g~~V~~~d~~~~~~~~~ 43 (311)
T PRK06130 4 IQNLAIIGAGTMGSGIAALFARKGLQVVLIDVMEGALERA 43 (311)
T ss_pred ccEEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHH
Confidence 4689999999999999999999999999999987665443
|
|
| >PRK14619 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.38 E-value=0.01 Score=53.36 Aligned_cols=35 Identities=26% Similarity=0.304 Sum_probs=32.2
Q ss_pred CCCeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCc
Q 017914 58 SPNRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNV 92 (364)
Q Consensus 58 ~~~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~ 92 (364)
.+|+|.|+|+|.+|+.++..|.+.||+|++.+|+.
T Consensus 3 ~~m~I~iiG~G~~G~~lA~~l~~~G~~V~~~~r~~ 37 (308)
T PRK14619 3 QPKTIAILGAGAWGSTLAGLASANGHRVRVWSRRS 37 (308)
T ss_pred CCCEEEEECccHHHHHHHHHHHHCCCEEEEEeCCC
Confidence 34789999999999999999999999999999975
|
|
| >PRK15182 Vi polysaccharide biosynthesis protein TviB; Provisional | Back alignment and domain information |
|---|
Probab=96.37 E-value=0.02 Score=53.75 Aligned_cols=73 Identities=16% Similarity=0.128 Sum_probs=50.5
Q ss_pred CCCeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEcc---------CCh-hhHHhhccCceeeEE
Q 017914 58 SPNRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFN---------ANE-TALMILTTLKNYTHL 127 (364)
Q Consensus 58 ~~~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D---------~~~-~~~~~~~~~d~v~~~ 127 (364)
..|+|-|+|.|++|..++..|.+ ||+|+++++++++.+.+.+....+..-+ +.- .+...+.++|+++-+
T Consensus 5 ~~mkI~vIGlGyvGlpmA~~la~-~~~V~g~D~~~~~ve~l~~G~~~~~e~~~~~l~~~g~l~~t~~~~~~~~advvii~ 83 (425)
T PRK15182 5 DEVKIAIIGLGYVGLPLAVEFGK-SRQVVGFDVNKKRILELKNGVDVNLETTEEELREARYLKFTSEIEKIKECNFYIIT 83 (425)
T ss_pred CCCeEEEECcCcchHHHHHHHhc-CCEEEEEeCCHHHHHHHHCcCCCCCCCCHHHHHhhCCeeEEeCHHHHcCCCEEEEE
Confidence 34899999999999999999776 6999999999988887763221111100 100 111356788999888
Q ss_pred EEec
Q 017914 128 LVSI 131 (364)
Q Consensus 128 ~~~~ 131 (364)
+...
T Consensus 84 Vptp 87 (425)
T PRK15182 84 VPTP 87 (425)
T ss_pred cCCC
Confidence 8654
|
|
| >PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional | Back alignment and domain information |
|---|
Probab=96.34 E-value=0.03 Score=53.50 Aligned_cols=101 Identities=14% Similarity=0.160 Sum_probs=69.2
Q ss_pred CCCeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCChh-------------hH-----Hh--
Q 017914 58 SPNRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANET-------------AL-----MI-- 117 (364)
Q Consensus 58 ~~~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~-------------~~-----~~-- 117 (364)
.+.+|+|+|.|.+|...+..+...|.+|+++++++++.+..++.+.+++..|..+. +. ..
T Consensus 164 pg~kVlViGaG~iGL~Ai~~Ak~lGA~V~a~D~~~~rle~aeslGA~~v~i~~~e~~~~~~gya~~~s~~~~~~~~~~~~ 243 (509)
T PRK09424 164 PPAKVLVIGAGVAGLAAIGAAGSLGAIVRAFDTRPEVAEQVESMGAEFLELDFEEEGGSGDGYAKVMSEEFIKAEMALFA 243 (509)
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeEEEeccccccccccchhhhcchhHHHHHHHHHH
Confidence 46799999999999999999999999999999999888887777888665544321 10 11
Q ss_pred --hccCceeeEEEEecCCCCCCCChhhhHHHHHHHHhhcCCccEEEEEcc
Q 017914 118 --LTTLKNYTHLLVSIPPLEGTGDPMLKHGELLRSTLMNGHLQWLGYLSS 165 (364)
Q Consensus 118 --~~~~d~v~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~r~v~~Ss 165 (364)
..++|+|+.+++..+. ..+ ....+..++.++..+ ++|.++.
T Consensus 244 ~~~~gaDVVIetag~pg~----~aP-~lit~~~v~~mkpGg--vIVdvg~ 286 (509)
T PRK09424 244 EQAKEVDIIITTALIPGK----PAP-KLITAEMVASMKPGS--VIVDLAA 286 (509)
T ss_pred hccCCCCEEEECCCCCcc----cCc-chHHHHHHHhcCCCC--EEEEEcc
Confidence 2468988888754221 111 112344555666544 5777764
|
|
| >PF00070 Pyr_redox: Pyridine nucleotide-disulphide oxidoreductase; InterPro: IPR001327 FAD flavoproteins belonging to the family of pyridine nucleotide-disulphide oxidoreductases (glutathione reductase, trypanothione reductase, lipoamide dehydrogenase, mercuric reductase, thioredoxin reductase, alkyl hydroperoxide reductase) share sequence similarity with a number of other flavoprotein oxidoreductases, in particular with ferredoxin-NAD+ reductases involved in oxidative metabolism of a variety of hydrocarbons (rubredoxin reductase, putidaredoxin reductase, terpredoxin reductase, ferredoxin-NAD+ reductase components of benzene 1,2-dioxygenase, toluene 1,2-dioxygenase, chlorobenzene dioxygenase, biphenyl dioxygenase), NADH oxidase and NADH peroxidase [, , ] | Back alignment and domain information |
|---|
Probab=96.34 E-value=0.0091 Score=41.76 Aligned_cols=34 Identities=26% Similarity=0.361 Sum_probs=31.3
Q ss_pred eEEEEcCChhhHHHHHHHHhCCCEEEEEEeCchh
Q 017914 61 RMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMK 94 (364)
Q Consensus 61 ~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~~ 94 (364)
+|+|+|+|++|-.++..|.+.|.+|+++.|++.-
T Consensus 1 ~vvViGgG~ig~E~A~~l~~~g~~vtli~~~~~~ 34 (80)
T PF00070_consen 1 RVVVIGGGFIGIELAEALAELGKEVTLIERSDRL 34 (80)
T ss_dssp EEEEESSSHHHHHHHHHHHHTTSEEEEEESSSSS
T ss_pred CEEEECcCHHHHHHHHHHHHhCcEEEEEeccchh
Confidence 5899999999999999999999999999997653
|
Comparison of the crystal structures of human glutathione reductase and Escherichia coli thioredoxin reductase reveals different locations of their active sites, suggesting that the enzymes diverged from an ancestral FAD/NAD(P)H reductase and acquired their disulphide reductase activities independently []. Despite functional similarities, oxidoreductases of this family show no sequence similarity with adrenodoxin reductases [] and flavoprotein pyridine nucleotide cytochrome reductases (FPNCR) []. Assuming that disulphide reductase activity emerged later, during divergent evolution, the family can be referred to as FAD-dependent pyridine nucleotide reductases, FADPNR. To date, 3D structures of glutathione reductase [], thioredoxin reductase [], mercuric reductase [], lipoamide dehydrogenase [], trypanothione reductase [] and NADH peroxidase [] have been solved. The enzymes share similar tertiary structures based on a doubly-wound alpha/beta fold, but the relative orientations of their FAD- and NAD(P)H-binding domains may vary significantly. By contrast with the FPNCR family, the folds of the FAD- and NAD(P)H-binding domains are similar, suggesting that the domains evolved by gene duplication []. This entry describes a small NADH binding domain within a larger FAD binding domain described by IPR023753 from INTERPRO. It is found in both class I and class II oxidoreductases. ; GO: 0016491 oxidoreductase activity, 0050660 flavin adenine dinucleotide binding, 0055114 oxidation-reduction process; PDB: 1ZKQ_A 3DGZ_A 1ZDL_A 2R9Z_B 2RAB_A 2A87_B 1M6I_A 2YVG_A 2GR1_A 2GQW_A .... |
| >PRK10537 voltage-gated potassium channel; Provisional | Back alignment and domain information |
|---|
Probab=96.31 E-value=0.04 Score=51.03 Aligned_cols=68 Identities=10% Similarity=0.015 Sum_probs=52.1
Q ss_pred CCeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCChhhH---HhhccCceeeEEE
Q 017914 59 PNRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETAL---MILTTLKNYTHLL 128 (364)
Q Consensus 59 ~~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~---~~~~~~d~v~~~~ 128 (364)
+.+|+|.|.|-+|+.++++|.++|++|++++.+. .+.....+..++.+|.+|.+. ..+++++.|+-+.
T Consensus 240 k~HvII~G~g~lg~~v~~~L~~~g~~vvVId~d~--~~~~~~~g~~vI~GD~td~e~L~~AgI~~A~aVI~~t 310 (393)
T PRK10537 240 KDHFIICGHSPLAINTYLGLRQRGQAVTVIVPLG--LEHRLPDDADLIPGDSSDSAVLKKAGAARARAILALR 310 (393)
T ss_pred CCeEEEECCChHHHHHHHHHHHCCCCEEEEECch--hhhhccCCCcEEEeCCCCHHHHHhcCcccCCEEEEcC
Confidence 4679999999999999999999999998888652 233333678899999999774 3346677766543
|
|
| >PRK00066 ldh L-lactate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=96.30 E-value=0.03 Score=50.44 Aligned_cols=70 Identities=17% Similarity=0.073 Sum_probs=49.7
Q ss_pred CCCCeEEEEcCChhhHHHHHHHHhCCC--EEEEEEeCchhhhhh----hh-----CCceEEEccCChhhHHhhccCceee
Q 017914 57 QSPNRMLILGMGFVGRIFAEKIKNQGW--VVSGTCTNVMKKKEL----EQ-----SGFDVHLFNANETALMILTTLKNYT 125 (364)
Q Consensus 57 ~~~~~vlVtGtG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~l----~~-----~~~~~~~~D~~~~~~~~~~~~d~v~ 125 (364)
..++||.|+|+|.+|+.++..|...|. ++.+++++.+..... .+ ..+.+.. .+.+.++++|+|+
T Consensus 4 ~~~~ki~iiGaG~vG~~~a~~l~~~~~~~el~L~D~~~~~~~g~~~Dl~~~~~~~~~~~i~~-----~~~~~~~~adivI 78 (315)
T PRK00066 4 KQHNKVVLVGDGAVGSSYAYALVNQGIADELVIIDINKEKAEGDAMDLSHAVPFTSPTKIYA-----GDYSDCKDADLVV 78 (315)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhcCCCCEEEEEeCCCchhHHHHHHHHhhccccCCeEEEe-----CCHHHhCCCCEEE
Confidence 345799999999999999999999886 899999976653321 11 1112211 1235689999999
Q ss_pred EEEEec
Q 017914 126 HLLVSI 131 (364)
Q Consensus 126 ~~~~~~ 131 (364)
..++..
T Consensus 79 itag~~ 84 (315)
T PRK00066 79 ITAGAP 84 (315)
T ss_pred EecCCC
Confidence 988763
|
|
| >PRK07411 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=96.29 E-value=0.028 Score=52.23 Aligned_cols=102 Identities=13% Similarity=0.003 Sum_probs=62.4
Q ss_pred CCCCeEEEEcCChhhHHHHHHHHhCCC-EEEEEEeCchhhhh-----------------------hhh--C--CceEEEc
Q 017914 57 QSPNRMLILGMGFVGRIFAEKIKNQGW-VVSGTCTNVMKKKE-----------------------LEQ--S--GFDVHLF 108 (364)
Q Consensus 57 ~~~~~vlVtGtG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~-----------------------l~~--~--~~~~~~~ 108 (364)
....+|||+|.|.+|..+++.|...|. ++++++.+.-.... +.+ + .++.+..
T Consensus 36 L~~~~VlivG~GGlG~~va~~La~~Gvg~l~lvD~D~ve~sNL~RQ~l~~~~dvG~~Ka~~a~~~l~~~np~v~v~~~~~ 115 (390)
T PRK07411 36 LKAASVLCIGTGGLGSPLLLYLAAAGIGRIGIVDFDVVDSSNLQRQVIHGTSWVGKPKIESAKNRILEINPYCQVDLYET 115 (390)
T ss_pred HhcCcEEEECCCHHHHHHHHHHHHcCCCEEEEECCCEecccccCcCcccChHHCCCcHHHHHHHHHHHHCCCCeEEEEec
Confidence 445799999999999999999999995 55555543211111 111 2 3445555
Q ss_pred cCChhhH-HhhccCceeeEEEEecCCCCCCCChhhhHHHHHHHHhhcCCccEEEEEccceeec
Q 017914 109 NANETAL-MILTTLKNYTHLLVSIPPLEGTGDPMLKHGELLRSTLMNGHLQWLGYLSSTGVYG 170 (364)
Q Consensus 109 D~~~~~~-~~~~~~d~v~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~r~v~~Ss~~vy~ 170 (364)
.++..+. ..+.++|.|+.+... . .....+-+++...++ .+|+.+..+.+|
T Consensus 116 ~~~~~~~~~~~~~~D~Vvd~~d~---------~--~~r~~ln~~~~~~~~-p~v~~~~~g~~g 166 (390)
T PRK07411 116 RLSSENALDILAPYDVVVDGTDN---------F--PTRYLVNDACVLLNK-PNVYGSIFRFEG 166 (390)
T ss_pred ccCHHhHHHHHhCCCEEEECCCC---------H--HHHHHHHHHHHHcCC-CEEEEEEccCEE
Confidence 5555443 567888988887532 1 223345566666654 477776655544
|
|
| >TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic | Back alignment and domain information |
|---|
Probab=96.29 E-value=0.012 Score=54.47 Aligned_cols=72 Identities=17% Similarity=0.154 Sum_probs=51.0
Q ss_pred CCCCeEEEE-c-C---------------ChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCChhh-H-H-
Q 017914 57 QSPNRMLIL-G-M---------------GFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETA-L-M- 116 (364)
Q Consensus 57 ~~~~~vlVt-G-t---------------G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~-~-~- 116 (364)
..+++|||| | | |.+|..+++.|..+|++|+++.+..... + ..++ ...|+.+.+ . .
T Consensus 183 ~~~~~vlit~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~Ga~V~~~~g~~~~~--~-~~~~--~~~~v~~~~~~~~~ 257 (390)
T TIGR00521 183 LEGKRVLITAGPTREPIDPVRFISNLSSGKMGLALAEAAYKRGADVTLITGPVSLL--T-PPGV--KSIKVSTAEEMLEA 257 (390)
T ss_pred cCCceEEEecCCccCCCCceeeecCCCcchHHHHHHHHHHHCCCEEEEeCCCCccC--C-CCCc--EEEEeccHHHHHHH
Confidence 567899999 5 4 7899999999999999999998765322 1 1222 446776643 2 1
Q ss_pred ----hhccCceeeEEEEecCC
Q 017914 117 ----ILTTLKNYTHLLVSIPP 133 (364)
Q Consensus 117 ----~~~~~d~v~~~~~~~~~ 133 (364)
....+|++++.|+....
T Consensus 258 ~~~~~~~~~D~~i~~Aavsd~ 278 (390)
T TIGR00521 258 ALNELAKDFDIFISAAAVADF 278 (390)
T ss_pred HHHhhcccCCEEEEccccccc
Confidence 22467999999987544
|
This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity. |
| >PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1 | Back alignment and domain information |
|---|
Probab=96.29 E-value=0.0075 Score=49.53 Aligned_cols=36 Identities=19% Similarity=0.275 Sum_probs=30.9
Q ss_pred eEEEEcCChhhHHHHHHHHhCCCEEEEEEeCchhhh
Q 017914 61 RMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMKKK 96 (364)
Q Consensus 61 ~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~~~~ 96 (364)
+|.|+|+|.+|+.++..++..|++|++++++++..+
T Consensus 1 ~V~ViGaG~mG~~iA~~~a~~G~~V~l~d~~~~~l~ 36 (180)
T PF02737_consen 1 KVAVIGAGTMGRGIAALFARAGYEVTLYDRSPEALE 36 (180)
T ss_dssp EEEEES-SHHHHHHHHHHHHTTSEEEEE-SSHHHHH
T ss_pred CEEEEcCCHHHHHHHHHHHhCCCcEEEEECChHHHH
Confidence 689999999999999999999999999999877543
|
1.1.35 from EC) (HCDH) [] is an enzyme involved in fatty acid metabolism, it catalyzes the reduction of 3-hydroxyacyl-CoA to 3-oxoacyl-CoA. Most eukaryotic cells have 2 fatty-acid beta-oxidation systems, one located in mitochondria and the other in peroxisomes. In peroxisomes 3-hydroxyacyl-CoA dehydrogenase forms, with enoyl-CoA hydratase (ECH) and 3,2-trans-enoyl-CoA isomerase (ECI) a multifunctional enzyme where the N-terminal domain bears the hydratase/isomerase activities and the C-terminal domain the dehydrogenase activity. There are two mitochondrial enzymes: one which is monofunctional and the other which is, like its peroxisomal counterpart, multifunctional. In Escherichia coli (gene fadB) and Pseudomonas fragi (gene faoA) HCDH is part of a multifunctional enzyme which also contains an ECH/ECI domain as well as a 3-hydroxybutyryl-CoA epimerase domain []. There are two major regions of similarity in the sequences of proteins of the HCDH family, the first one located in the N-terminal, corresponds to the NAD-binding site, the second one is located in the centre of the sequence. This represents the C-terminal domain which is also found in lambda crystallin. Some proteins include two copies of this domain.; GO: 0003857 3-hydroxyacyl-CoA dehydrogenase activity, 0016491 oxidoreductase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 3K6J_A 1ZCJ_A 2X58_A 1ZEJ_A 3HDH_B 2WTB_A 1WDL_B 2D3T_B 1WDK_A 1WDM_B .... |
| >TIGR01019 sucCoAalpha succinyl-CoA synthetase, alpha subunit | Back alignment and domain information |
|---|
Probab=96.28 E-value=0.23 Score=43.87 Aligned_cols=88 Identities=10% Similarity=0.131 Sum_probs=51.4
Q ss_pred CCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCChhhHHhhcc--CceeeEEEEecCCCC
Q 017914 59 PNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETALMILTT--LKNYTHLLVSIPPLE 135 (364)
Q Consensus 59 ~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~~~~~~--~d~v~~~~~~~~~~~ 135 (364)
..+|+|-| ||.+|+.+.+.|...|+++++.+......+.+ .++..+ -++. ++.+. +|.++.++.
T Consensus 6 ~~~~~~~g~~~~~~~~~~~~~~~~g~~~v~~V~p~~~~~~v--~G~~~y-~sv~----dlp~~~~~Dlavi~vp------ 72 (286)
T TIGR01019 6 DTKVIVQGITGSQGSFHTEQMLAYGTNIVGGVTPGKGGTTV--LGLPVF-DSVK----EAVEETGANASVIFVP------ 72 (286)
T ss_pred CCcEEEecCCcHHHHHHHHHHHhCCCCEEEEECCCCCccee--cCeecc-CCHH----HHhhccCCCEEEEecC------
Confidence 46899999 99999999999999998855544332112111 122211 1111 22222 566666552
Q ss_pred CCCChhhhHHHHHHHHhhcCCccEEEEEcc
Q 017914 136 GTGDPMLKHGELLRSTLMNGHLQWLGYLSS 165 (364)
Q Consensus 136 ~~~~~~~~~~~~l~~a~~~~~~~r~v~~Ss 165 (364)
. .....+++.|.+.|++.+|-+|+
T Consensus 73 -----a-~~v~~~l~e~~~~Gvk~avIis~ 96 (286)
T TIGR01019 73 -----A-PFAADAIFEAIDAGIELIVCITE 96 (286)
T ss_pred -----H-HHHHHHHHHHHHCCCCEEEEECC
Confidence 1 22233444555678998887775
|
ATP citrate lyases appear to form an outgroup. |
| >COG0287 TyrA Prephenate dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.27 E-value=0.027 Score=49.50 Aligned_cols=37 Identities=24% Similarity=0.376 Sum_probs=32.1
Q ss_pred CCeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCchhh
Q 017914 59 PNRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMKK 95 (364)
Q Consensus 59 ~~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~~~ 95 (364)
+++|+|.|.|.||+.+++.|.++|+.|.++.++....
T Consensus 3 ~~~v~IvG~GliG~s~a~~l~~~g~~v~i~g~d~~~~ 39 (279)
T COG0287 3 SMKVGIVGLGLMGGSLARALKEAGLVVRIIGRDRSAA 39 (279)
T ss_pred CcEEEEECCchHHHHHHHHHHHcCCeEEEEeecCcHH
Confidence 5789999999999999999999999998877765543
|
|
| >PRK06019 phosphoribosylaminoimidazole carboxylase ATPase subunit; Reviewed | Back alignment and domain information |
|---|
Probab=96.26 E-value=0.018 Score=53.37 Aligned_cols=65 Identities=17% Similarity=0.124 Sum_probs=48.4
Q ss_pred CCeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCChhhH--HhhccCceee
Q 017914 59 PNRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETAL--MILTTLKNYT 125 (364)
Q Consensus 59 ~~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~--~~~~~~d~v~ 125 (364)
|++|+|+|+|.+|+.++..+.+.|++|++++.++...... -.-..+.+|+.|.+. ...+.+|+|.
T Consensus 2 ~~~igilG~Gql~~ml~~aa~~lG~~v~~~d~~~~~pa~~--~ad~~~~~~~~D~~~l~~~a~~~dvit 68 (372)
T PRK06019 2 MKTIGIIGGGQLGRMLALAAAPLGYKVIVLDPDPDSPAAQ--VADEVIVADYDDVAALRELAEQCDVIT 68 (372)
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCEEEEEeCCCCCchhH--hCceEEecCCCCHHHHHHHHhcCCEEE
Confidence 4789999999999999999999999999999865442211 112456678888664 4456777664
|
|
| >PRK12490 6-phosphogluconate dehydrogenase-like protein; Reviewed | Back alignment and domain information |
|---|
Probab=96.26 E-value=0.031 Score=50.07 Aligned_cols=44 Identities=23% Similarity=0.371 Sum_probs=38.0
Q ss_pred CeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCc
Q 017914 60 NRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGF 103 (364)
Q Consensus 60 ~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~ 103 (364)
|+|.|+|.|.+|..+++.|++.|++|++.+|++++.+.+.+.++
T Consensus 1 m~Ig~IGlG~mG~~mA~~L~~~g~~v~v~dr~~~~~~~~~~~g~ 44 (299)
T PRK12490 1 MKLGLIGLGKMGGNMAERLREDGHEVVGYDVNQEAVDVAGKLGI 44 (299)
T ss_pred CEEEEEcccHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHCCC
Confidence 47999999999999999999999999999999887766654443
|
|
| >PRK06249 2-dehydropantoate 2-reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.25 E-value=0.013 Score=52.81 Aligned_cols=36 Identities=19% Similarity=0.336 Sum_probs=33.0
Q ss_pred CCCCeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCc
Q 017914 57 QSPNRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNV 92 (364)
Q Consensus 57 ~~~~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~ 92 (364)
+..|+|+|+|+|-||..++..|.+.|++|+++.|+.
T Consensus 3 ~~~m~I~IiG~GaiG~~lA~~L~~~g~~V~~~~r~~ 38 (313)
T PRK06249 3 SETPRIGIIGTGAIGGFYGAMLARAGFDVHFLLRSD 38 (313)
T ss_pred CcCcEEEEECCCHHHHHHHHHHHHCCCeEEEEEeCC
Confidence 345799999999999999999999999999999976
|
|
| >PRK08293 3-hydroxybutyryl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=96.25 E-value=0.043 Score=48.84 Aligned_cols=38 Identities=16% Similarity=0.128 Sum_probs=34.0
Q ss_pred CCeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCchhhh
Q 017914 59 PNRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMKKK 96 (364)
Q Consensus 59 ~~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~~~~ 96 (364)
.++|.|+|+|.+|..++..|...|++|++.+++++..+
T Consensus 3 ~~kIaViGaG~mG~~iA~~la~~G~~V~l~d~~~~~l~ 40 (287)
T PRK08293 3 IKNVTVAGAGVLGSQIAFQTAFHGFDVTIYDISDEALE 40 (287)
T ss_pred ccEEEEECCCHHHHHHHHHHHhcCCeEEEEeCCHHHHH
Confidence 36899999999999999999999999999999876543
|
|
| >PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3 | Back alignment and domain information |
|---|
Probab=96.22 E-value=0.018 Score=45.78 Aligned_cols=68 Identities=19% Similarity=0.267 Sum_probs=45.1
Q ss_pred CCCCCeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCChhhHHhhccCceeeEEEE
Q 017914 56 WQSPNRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETALMILTTLKNYTHLLV 129 (364)
Q Consensus 56 ~~~~~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~~~~~~~d~v~~~~~ 129 (364)
...+++++|+|-|.+|+.+++.|...|.+|++...+|-+.-.....+.++.. .+ +++...|.++...+
T Consensus 20 ~l~Gk~vvV~GYG~vG~g~A~~lr~~Ga~V~V~e~DPi~alqA~~dGf~v~~-----~~-~a~~~adi~vtaTG 87 (162)
T PF00670_consen 20 MLAGKRVVVIGYGKVGKGIARALRGLGARVTVTEIDPIRALQAAMDGFEVMT-----LE-EALRDADIFVTATG 87 (162)
T ss_dssp --TTSEEEEE--SHHHHHHHHHHHHTT-EEEEE-SSHHHHHHHHHTT-EEE------HH-HHTTT-SEEEE-SS
T ss_pred eeCCCEEEEeCCCcccHHHHHHHhhCCCEEEEEECChHHHHHhhhcCcEecC-----HH-HHHhhCCEEEECCC
Confidence 4567899999999999999999999999999999988765554446766542 11 46677787666543
|
3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C .... |
| >TIGR01850 argC N-acetyl-gamma-glutamyl-phosphate reductase, common form | Back alignment and domain information |
|---|
Probab=96.20 E-value=0.018 Score=52.64 Aligned_cols=96 Identities=14% Similarity=0.030 Sum_probs=53.1
Q ss_pred CeEEEEc-CChhhHHHHHHHHhC-CCEEEEE-EeCchhhhhhhh--CCceEE-EccCChhhH-HhhccCceeeEEEEecC
Q 017914 60 NRMLILG-MGFVGRIFAEKIKNQ-GWVVSGT-CTNVMKKKELEQ--SGFDVH-LFNANETAL-MILTTLKNYTHLLVSIP 132 (364)
Q Consensus 60 ~~vlVtG-tG~iG~~l~~~L~~~-g~~V~~~-~r~~~~~~~l~~--~~~~~~-~~D~~~~~~-~~~~~~d~v~~~~~~~~ 132 (364)
|+|.|+| ||++|+.+++.|.+. +++++.+ +++......+.. ..+... ..++.+.+. ....++|+|+.+...
T Consensus 1 ~kVaIiGATG~vG~ellr~L~~hP~~el~~l~~s~~sagk~~~~~~~~l~~~~~~~~~~~~~~~~~~~~DvVf~alP~-- 78 (346)
T TIGR01850 1 IKVAIVGASGYTGGELLRLLLNHPEVEITYLVSSRESAGKPVSEVHPHLRGLVDLNLEPIDEEEIAEDADVVFLALPH-- 78 (346)
T ss_pred CEEEEECCCCHHHHHHHHHHHcCCCceEEEEeccchhcCCChHHhCccccccCCceeecCCHHHhhcCCCEEEECCCc--
Confidence 5899999 899999999999987 6788854 443322111110 111111 111221121 233478888776521
Q ss_pred CCCCCCChhhhHHHHHHHHhhcCCccEEEEEcccee
Q 017914 133 PLEGTGDPMLKHGELLRSTLMNGHLQWLGYLSSTGV 168 (364)
Q Consensus 133 ~~~~~~~~~~~~~~~l~~a~~~~~~~r~v~~Ss~~v 168 (364)
.....+...+.+.| +++|=.|+..-
T Consensus 79 ----------~~s~~~~~~~~~~G-~~VIDlS~~fR 103 (346)
T TIGR01850 79 ----------GVSAELAPELLAAG-VKVIDLSADFR 103 (346)
T ss_pred ----------hHHHHHHHHHHhCC-CEEEeCChhhh
Confidence 12334444444555 57888887543
|
This model represents the more common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and the gap architecture in a multiple sequence alignment. Bacterial members of this family tend to be found within Arg biosynthesis operons. |
| >cd05292 LDH_2 A subgroup of L-lactate dehydrogenases | Back alignment and domain information |
|---|
Probab=96.18 E-value=0.031 Score=50.21 Aligned_cols=67 Identities=16% Similarity=0.047 Sum_probs=48.0
Q ss_pred CeEEEEcCChhhHHHHHHHHhCC--CEEEEEEeCchhhhh----hhhC-----CceEEEccCChhhHHhhccCceeeEEE
Q 017914 60 NRMLILGMGFVGRIFAEKIKNQG--WVVSGTCTNVMKKKE----LEQS-----GFDVHLFNANETALMILTTLKNYTHLL 128 (364)
Q Consensus 60 ~~vlVtGtG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~----l~~~-----~~~~~~~D~~~~~~~~~~~~d~v~~~~ 128 (364)
|+|.|+|+|.+|..++..|..+| .+|.+++++.+.... +... ...+... +...++++|.|+.++
T Consensus 1 mkI~IIGaG~VG~~~a~~l~~~g~~~ev~l~D~~~~~~~g~a~dl~~~~~~~~~~~i~~~-----d~~~l~~aDiViita 75 (308)
T cd05292 1 MKVAIVGAGFVGSTTAYALLLRGLASEIVLVDINKAKAEGEAMDLAHGTPFVKPVRIYAG-----DYADCKGADVVVITA 75 (308)
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCCCEEEEEECCchhhhhHHHHHHccccccCCeEEeeC-----CHHHhCCCCEEEEcc
Confidence 58999999999999999999999 689999998765432 2211 1111111 235688999999988
Q ss_pred Eec
Q 017914 129 VSI 131 (364)
Q Consensus 129 ~~~ 131 (364)
+..
T Consensus 76 ~~~ 78 (308)
T cd05292 76 GAN 78 (308)
T ss_pred CCC
Confidence 753
|
L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed predominantly of bacterial LDHs and a few fungal LDHs. Bacterial LDHs may be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >PRK14851 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=96.17 E-value=0.035 Score=55.04 Aligned_cols=98 Identities=12% Similarity=-0.015 Sum_probs=60.9
Q ss_pred CCCCeEEEEcCChhhHHHHHHHHhCCC-EEEEEEeCch-------------------hhhh----hhh----CCceEEEc
Q 017914 57 QSPNRMLILGMGFVGRIFAEKIKNQGW-VVSGTCTNVM-------------------KKKE----LEQ----SGFDVHLF 108 (364)
Q Consensus 57 ~~~~~vlVtGtG~iG~~l~~~L~~~g~-~V~~~~r~~~-------------------~~~~----l~~----~~~~~~~~ 108 (364)
....+|+|+|.|.+|+.++..|...|. ++++++.+.- +.+. +.+ ..++.+..
T Consensus 41 L~~~~VlIvG~GGlGs~va~~Lar~GVG~l~LvD~D~ve~sNLNRQ~~~~~~dvG~~Kv~v~~~~l~~inP~~~I~~~~~ 120 (679)
T PRK14851 41 LAEAKVAIPGMGGVGGVHLITMVRTGIGRFHIADFDQFEPVNVNRQFGARVPSFGRPKLAVMKEQALSINPFLEITPFPA 120 (679)
T ss_pred HhcCeEEEECcCHHHHHHHHHHHHhCCCeEEEEcCCEecccccccCcCcChhhCCCHHHHHHHHHHHHhCCCCeEEEEec
Confidence 456799999999999999999999985 4444443211 1110 110 24556667
Q ss_pred cCChhhH-HhhccCceeeEEEEecCCCCCCCChhhhHHHHHHHHhhcCCccEEEEEc
Q 017914 109 NANETAL-MILTTLKNYTHLLVSIPPLEGTGDPMLKHGELLRSTLMNGHLQWLGYLS 164 (364)
Q Consensus 109 D~~~~~~-~~~~~~d~v~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~r~v~~S 164 (364)
.++..+. ..++++|.|+.+.. .........+...|...++. +|+.+
T Consensus 121 ~i~~~n~~~~l~~~DvVid~~D---------~~~~~~r~~l~~~c~~~~iP-~i~~g 167 (679)
T PRK14851 121 GINADNMDAFLDGVDVVLDGLD---------FFQFEIRRTLFNMAREKGIP-VITAG 167 (679)
T ss_pred CCChHHHHHHHhCCCEEEECCC---------CCcHHHHHHHHHHHHHCCCC-EEEee
Confidence 7776554 56788998886542 11122334566667777765 66654
|
|
| >PRK05708 2-dehydropantoate 2-reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.16 E-value=0.012 Score=52.93 Aligned_cols=41 Identities=20% Similarity=0.276 Sum_probs=36.0
Q ss_pred CCeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCchhhhhhh
Q 017914 59 PNRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELE 99 (364)
Q Consensus 59 ~~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~ 99 (364)
.|+|+|+|+|.||..++-.|.+.|++|+++.|..+..+.+.
T Consensus 2 ~m~I~IiGaGaiG~~~a~~L~~~G~~V~lv~r~~~~~~~i~ 42 (305)
T PRK05708 2 SMTWHILGAGSLGSLWACRLARAGLPVRLILRDRQRLAAYQ 42 (305)
T ss_pred CceEEEECCCHHHHHHHHHHHhCCCCeEEEEechHHHHHHh
Confidence 47999999999999999999999999999999876655554
|
|
| >PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B | Back alignment and domain information |
|---|
Probab=96.15 E-value=0.054 Score=39.91 Aligned_cols=88 Identities=14% Similarity=-0.000 Sum_probs=55.3
Q ss_pred CCCCeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCChhhHHhhccCceeeEEEEecCCCCC
Q 017914 57 QSPNRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETALMILTTLKNYTHLLVSIPPLEG 136 (364)
Q Consensus 57 ~~~~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~~~~~~~d~v~~~~~~~~~~~~ 136 (364)
..+++|||+|+|-+|..=++.|++.|.+|++++......+ ..+++..-++. ..+.+++.|+-..
T Consensus 5 l~~~~vlVvGgG~va~~k~~~Ll~~gA~v~vis~~~~~~~----~~i~~~~~~~~----~~l~~~~lV~~at-------- 68 (103)
T PF13241_consen 5 LKGKRVLVVGGGPVAARKARLLLEAGAKVTVISPEIEFSE----GLIQLIRREFE----EDLDGADLVFAAT-------- 68 (103)
T ss_dssp -TT-EEEEEEESHHHHHHHHHHCCCTBEEEEEESSEHHHH----TSCEEEESS-G----GGCTTESEEEE-S--------
T ss_pred cCCCEEEEECCCHHHHHHHHHHHhCCCEEEEECCchhhhh----hHHHHHhhhHH----HHHhhheEEEecC--------
Confidence 4578999999999999999999999999999999861111 44555444432 2345555444221
Q ss_pred CCChhhhHHHHHHHHhhcCCccEEEEEcc
Q 017914 137 TGDPMLKHGELLRSTLMNGHLQWLGYLSS 165 (364)
Q Consensus 137 ~~~~~~~~~~~l~~a~~~~~~~r~v~~Ss 165 (364)
.+ ......+...+++.+ .+|.++.
T Consensus 69 -~d--~~~n~~i~~~a~~~~--i~vn~~D 92 (103)
T PF13241_consen 69 -DD--PELNEAIYADARARG--ILVNVVD 92 (103)
T ss_dssp -S---HHHHHHHHHHHHHTT--SEEEETT
T ss_pred -CC--HHHHHHHHHHHhhCC--EEEEECC
Confidence 22 233456666777665 4666654
|
|
| >TIGR00507 aroE shikimate 5-dehydrogenase | Back alignment and domain information |
|---|
Probab=96.12 E-value=0.0098 Score=52.38 Aligned_cols=69 Identities=23% Similarity=0.277 Sum_probs=47.3
Q ss_pred CCCeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhC----CceEEEccCChhhHHhhccCceeeEEEEe
Q 017914 58 SPNRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQS----GFDVHLFNANETALMILTTLKNYTHLLVS 130 (364)
Q Consensus 58 ~~~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~----~~~~~~~D~~~~~~~~~~~~d~v~~~~~~ 130 (364)
.+++++|+|+|.+|+.++..|.+.|++|++.+|+.++...+.+. +. ....+..+ .....+|.|+++...
T Consensus 116 ~~k~vliiGaGg~g~aia~~L~~~g~~v~v~~R~~~~~~~la~~~~~~~~-~~~~~~~~---~~~~~~DivInatp~ 188 (270)
T TIGR00507 116 PNQRVLIIGAGGAARAVALPLLKADCNVIIANRTVSKAEELAERFQRYGE-IQAFSMDE---LPLHRVDLIINATSA 188 (270)
T ss_pred cCCEEEEEcCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhcCc-eEEechhh---hcccCccEEEECCCC
Confidence 46789999999999999999999999999999987766554321 11 11111111 223467888777643
|
This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain. |
| >PRK05808 3-hydroxybutyryl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=96.10 E-value=0.056 Score=47.94 Aligned_cols=37 Identities=16% Similarity=0.152 Sum_probs=33.8
Q ss_pred CCeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCchhh
Q 017914 59 PNRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMKK 95 (364)
Q Consensus 59 ~~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~~~ 95 (364)
+++|.|+|+|.+|..++..|++.|++|++++++++..
T Consensus 3 ~~kI~VIG~G~mG~~ia~~la~~g~~V~~~d~~~~~~ 39 (282)
T PRK05808 3 IQKIGVIGAGTMGNGIAQVCAVAGYDVVMVDISDAAV 39 (282)
T ss_pred ccEEEEEccCHHHHHHHHHHHHCCCceEEEeCCHHHH
Confidence 3689999999999999999999999999999987765
|
|
| >PRK13940 glutamyl-tRNA reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.10 E-value=0.013 Score=54.76 Aligned_cols=72 Identities=13% Similarity=0.154 Sum_probs=53.2
Q ss_pred CCCCCeEEEEcCChhhHHHHHHHHhCCC-EEEEEEeCchhhhhhhhC-C-ceEEEccCChhhHHhhccCceeeEEEEe
Q 017914 56 WQSPNRMLILGMGFVGRIFAEKIKNQGW-VVSGTCTNVMKKKELEQS-G-FDVHLFNANETALMILTTLKNYTHLLVS 130 (364)
Q Consensus 56 ~~~~~~vlVtGtG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~l~~~-~-~~~~~~D~~~~~~~~~~~~d~v~~~~~~ 130 (364)
...+++|||+|+|.+|+.++..|.+.|. ++++..|+.++...+.+. + ...+. +.+. ...+..+|.|+++.+.
T Consensus 178 ~l~~kkvlviGaG~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~~~~~~~~--~~~l-~~~l~~aDiVI~aT~a 252 (414)
T PRK13940 178 NISSKNVLIIGAGQTGELLFRHVTALAPKQIMLANRTIEKAQKITSAFRNASAHY--LSEL-PQLIKKADIIIAAVNV 252 (414)
T ss_pred CccCCEEEEEcCcHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHhcCCeEec--HHHH-HHHhccCCEEEECcCC
Confidence 3456899999999999999999999994 799999998877666532 1 22222 2221 2567889999998754
|
|
| >TIGR01035 hemA glutamyl-tRNA reductase | Back alignment and domain information |
|---|
Probab=96.07 E-value=0.019 Score=53.95 Aligned_cols=70 Identities=13% Similarity=0.140 Sum_probs=50.8
Q ss_pred CCCCeEEEEcCChhhHHHHHHHHhCC-CEEEEEEeCchhhhhhhh-CCceEEEccCChhhHHhhccCceeeEEEE
Q 017914 57 QSPNRMLILGMGFVGRIFAEKIKNQG-WVVSGTCTNVMKKKELEQ-SGFDVHLFNANETALMILTTLKNYTHLLV 129 (364)
Q Consensus 57 ~~~~~vlVtGtG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~l~~-~~~~~~~~D~~~~~~~~~~~~d~v~~~~~ 129 (364)
..+++|+|+|+|.+|..+++.|...| .+|++.+|+.++...+.. .+...+. ..+.. ..+.++|+|+.+.+
T Consensus 178 l~~~~VlViGaG~iG~~~a~~L~~~G~~~V~v~~rs~~ra~~la~~~g~~~i~--~~~l~-~~l~~aDvVi~aT~ 249 (417)
T TIGR01035 178 LKGKKALLIGAGEMGELVAKHLLRKGVGKILIANRTYERAEDLAKELGGEAVK--FEDLE-EYLAEADIVISSTG 249 (417)
T ss_pred ccCCEEEEECChHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCeEee--HHHHH-HHHhhCCEEEECCC
Confidence 45689999999999999999999999 799999998877554432 2323222 22222 56678898888753
|
This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA. |
| >PRK07574 formate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.07 E-value=0.048 Score=50.33 Aligned_cols=68 Identities=13% Similarity=0.078 Sum_probs=48.0
Q ss_pred CCCCeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCChhhHHhhccCceeeEEEE
Q 017914 57 QSPNRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETALMILTTLKNYTHLLV 129 (364)
Q Consensus 57 ~~~~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~~~~~~~d~v~~~~~ 129 (364)
..+|+|.|+|.|.||+.+++.|...|.+|++.+|...........++..+ .+.+ +.++.+|+|+.+..
T Consensus 190 L~gktVGIvG~G~IG~~vA~~l~~fG~~V~~~dr~~~~~~~~~~~g~~~~----~~l~-ell~~aDvV~l~lP 257 (385)
T PRK07574 190 LEGMTVGIVGAGRIGLAVLRRLKPFDVKLHYTDRHRLPEEVEQELGLTYH----VSFD-SLVSVCDVVTIHCP 257 (385)
T ss_pred cCCCEEEEECCCHHHHHHHHHHHhCCCEEEEECCCCCchhhHhhcCceec----CCHH-HHhhcCCEEEEcCC
Confidence 45789999999999999999999999999999997533221111232211 1122 67788998887663
|
|
| >KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only] | Back alignment and domain information |
|---|
Probab=96.06 E-value=0.02 Score=52.20 Aligned_cols=74 Identities=16% Similarity=0.184 Sum_probs=54.1
Q ss_pred CCCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCChhhH-Hhh-----ccCceeeEEE
Q 017914 56 WQSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETAL-MIL-----TTLKNYTHLL 128 (364)
Q Consensus 56 ~~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~-~~~-----~~~d~v~~~~ 128 (364)
...++.|||.| +|.+|++.++.+...|..+++.+++.++.+..++.+... ..|+.+++. +.+ .++|+|++++
T Consensus 155 ~~~g~~vLv~ggsggVG~~aiQlAk~~~~~~v~t~~s~e~~~l~k~lGAd~-vvdy~~~~~~e~~kk~~~~~~DvVlD~v 233 (347)
T KOG1198|consen 155 LSKGKSVLVLGGSGGVGTAAIQLAKHAGAIKVVTACSKEKLELVKKLGADE-VVDYKDENVVELIKKYTGKGVDVVLDCV 233 (347)
T ss_pred cCCCCeEEEEeCCcHHHHHHHHHHHhcCCcEEEEEcccchHHHHHHcCCcE-eecCCCHHHHHHHHhhcCCCccEEEECC
Confidence 34567999998 899999999999998966666667767766666566443 367777665 322 3589999988
Q ss_pred Ee
Q 017914 129 VS 130 (364)
Q Consensus 129 ~~ 130 (364)
+.
T Consensus 234 g~ 235 (347)
T KOG1198|consen 234 GG 235 (347)
T ss_pred CC
Confidence 64
|
|
| >PLN02256 arogenate dehydrogenase | Back alignment and domain information |
|---|
Probab=96.05 E-value=0.024 Score=50.74 Aligned_cols=67 Identities=15% Similarity=0.130 Sum_probs=46.3
Q ss_pred CCCCCeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCChhhHHhh-ccCceeeEEE
Q 017914 56 WQSPNRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETALMIL-TTLKNYTHLL 128 (364)
Q Consensus 56 ~~~~~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~~~~-~~~d~v~~~~ 128 (364)
...+|+|.|+|.|.+|+.++..|.+.|++|++++|+... ......++.. ..+.+ ..+ ..+|.|+.++
T Consensus 33 ~~~~~kI~IIG~G~mG~slA~~L~~~G~~V~~~d~~~~~-~~a~~~gv~~----~~~~~-e~~~~~aDvVilav 100 (304)
T PLN02256 33 KSRKLKIGIVGFGNFGQFLAKTFVKQGHTVLATSRSDYS-DIAAELGVSF----FRDPD-DFCEEHPDVVLLCT 100 (304)
T ss_pred cCCCCEEEEEeeCHHHHHHHHHHHhCCCEEEEEECccHH-HHHHHcCCee----eCCHH-HHhhCCCCEEEEec
Confidence 456789999999999999999999999999999998632 2222234432 22222 233 3578777765
|
|
| >PRK07679 pyrroline-5-carboxylate reductase; Reviewed | Back alignment and domain information |
|---|
Probab=96.05 E-value=0.028 Score=49.78 Aligned_cols=65 Identities=14% Similarity=0.139 Sum_probs=46.2
Q ss_pred CCeEEEEcCChhhHHHHHHHHhCC----CEEEEEEeCch-hhhhhhh-CCceEEEccCChhhHHhhccCceeeEEE
Q 017914 59 PNRMLILGMGFVGRIFAEKIKNQG----WVVSGTCTNVM-KKKELEQ-SGFDVHLFNANETALMILTTLKNYTHLL 128 (364)
Q Consensus 59 ~~~vlVtGtG~iG~~l~~~L~~~g----~~V~~~~r~~~-~~~~l~~-~~~~~~~~D~~~~~~~~~~~~d~v~~~~ 128 (364)
.|+|.++|+|.+|..+++.|++.| ++|++.+|+.+ ....+.. .++... .+.. +....+|+|+.++
T Consensus 3 ~mkI~~IG~G~mG~aia~~l~~~g~~~~~~v~v~~r~~~~~~~~l~~~~g~~~~----~~~~-e~~~~aDvVilav 73 (279)
T PRK07679 3 IQNISFLGAGSIAEAIIGGLLHANVVKGEQITVSNRSNETRLQELHQKYGVKGT----HNKK-ELLTDANILFLAM 73 (279)
T ss_pred CCEEEEECccHHHHHHHHHHHHCCCCCcceEEEECCCCHHHHHHHHHhcCceEe----CCHH-HHHhcCCEEEEEe
Confidence 479999999999999999999998 78999998754 3344432 244322 1111 4566788888776
|
|
| >PRK09880 L-idonate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.04 E-value=0.054 Score=49.51 Aligned_cols=94 Identities=12% Similarity=0.061 Sum_probs=61.5
Q ss_pred CCCeEEEEcCChhhHHHHHHHHhCCC-EEEEEEeCchhhhhhhhCCceEEEccCChhhH-Hhh---ccCceeeEEEEecC
Q 017914 58 SPNRMLILGMGFVGRIFAEKIKNQGW-VVSGTCTNVMKKKELEQSGFDVHLFNANETAL-MIL---TTLKNYTHLLVSIP 132 (364)
Q Consensus 58 ~~~~vlVtGtG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~-~~~---~~~d~v~~~~~~~~ 132 (364)
.+.+|||+|+|.+|...++.+...|. +|++.++++++.+.+.+.+++.+ .|..+.+. ... ..+|.|+.+++.
T Consensus 169 ~g~~VlV~G~G~vG~~aiqlak~~G~~~Vi~~~~~~~~~~~a~~lGa~~v-i~~~~~~~~~~~~~~g~~D~vid~~G~-- 245 (343)
T PRK09880 169 QGKRVFVSGVGPIGCLIVAAVKTLGAAEIVCADVSPRSLSLAREMGADKL-VNPQNDDLDHYKAEKGYFDVSFEVSGH-- 245 (343)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHHHHcCCcEE-ecCCcccHHHHhccCCCCCEEEECCCC--
Confidence 46799999999999999999999998 68899998888776666666543 34433222 111 236777776541
Q ss_pred CCCCCCChhhhHHHHHHHHhhcCCccEEEEEcc
Q 017914 133 PLEGTGDPMLKHGELLRSTLMNGHLQWLGYLSS 165 (364)
Q Consensus 133 ~~~~~~~~~~~~~~~l~~a~~~~~~~r~v~~Ss 165 (364)
+ ......+..++..| ++|.++.
T Consensus 246 -------~--~~~~~~~~~l~~~G--~iv~~G~ 267 (343)
T PRK09880 246 -------P--SSINTCLEVTRAKG--VMVQVGM 267 (343)
T ss_pred -------H--HHHHHHHHHhhcCC--EEEEEcc
Confidence 1 12234455555554 7887653
|
|
| >PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=96.04 E-value=0.016 Score=54.05 Aligned_cols=66 Identities=17% Similarity=0.157 Sum_probs=48.9
Q ss_pred CCCCeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCChhhHHhhccCceeeEEE
Q 017914 57 QSPNRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETALMILTTLKNYTHLL 128 (364)
Q Consensus 57 ~~~~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~~~~~~~d~v~~~~ 128 (364)
..+++|+|+|.|.||+.+++.|...|.+|++.++++.+.......+..+. + .+ ..+.++|+|+.+.
T Consensus 210 l~Gk~VlViG~G~IG~~vA~~lr~~Ga~ViV~d~dp~ra~~A~~~G~~v~--~---l~-eal~~aDVVI~aT 275 (425)
T PRK05476 210 IAGKVVVVAGYGDVGKGCAQRLRGLGARVIVTEVDPICALQAAMDGFRVM--T---ME-EAAELGDIFVTAT 275 (425)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCEEEEEcCCchhhHHHHhcCCEec--C---HH-HHHhCCCEEEECC
Confidence 46789999999999999999999999999999998766543333344322 2 12 4567889887643
|
|
| >TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase | Back alignment and domain information |
|---|
Probab=96.04 E-value=0.052 Score=49.15 Aligned_cols=93 Identities=18% Similarity=0.216 Sum_probs=60.7
Q ss_pred CCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCChh-hH----Hhh--ccCceeeEEEE
Q 017914 58 SPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANET-AL----MIL--TTLKNYTHLLV 129 (364)
Q Consensus 58 ~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~-~~----~~~--~~~d~v~~~~~ 129 (364)
.+.+|||+| +|.+|..+++.+...|.+|++.+++.++.+.+.+.+++.+ .|..+. .+ ... .++|.|+.+.+
T Consensus 138 ~g~~VLI~ga~g~vG~~aiqlAk~~G~~Vi~~~~s~~~~~~~~~lGa~~v-i~~~~~~~~~~~~~~~~~~gvdvv~d~~G 216 (325)
T TIGR02825 138 GGETVMVNAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKVAYLKKLGFDVA-FNYKTVKSLEETLKKASPDGYDCYFDNVG 216 (325)
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCEE-EeccccccHHHHHHHhCCCCeEEEEECCC
Confidence 457999999 8999999999999999999999998887777666665432 233321 11 112 24677766543
Q ss_pred ecCCCCCCCChhhhHHHHHHHHhhcCCccEEEEEcc
Q 017914 130 SIPPLEGTGDPMLKHGELLRSTLMNGHLQWLGYLSS 165 (364)
Q Consensus 130 ~~~~~~~~~~~~~~~~~~l~~a~~~~~~~r~v~~Ss 165 (364)
. . .....+..++..| ++|.++.
T Consensus 217 ~---------~---~~~~~~~~l~~~G--~iv~~G~ 238 (325)
T TIGR02825 217 G---------E---FSNTVIGQMKKFG--RIAICGA 238 (325)
T ss_pred H---------H---HHHHHHHHhCcCc--EEEEecc
Confidence 1 1 1234455555554 7887664
|
Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase. |
| >TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain | Back alignment and domain information |
|---|
Probab=96.04 E-value=0.053 Score=45.53 Aligned_cols=66 Identities=17% Similarity=0.040 Sum_probs=48.4
Q ss_pred CCCCeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCchh-hhhhh-hCCceEEEccCChhhHHhhccCceee
Q 017914 57 QSPNRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMK-KKELE-QSGFDVHLFNANETALMILTTLKNYT 125 (364)
Q Consensus 57 ~~~~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~~-~~~l~-~~~~~~~~~D~~~~~~~~~~~~d~v~ 125 (364)
..+++|||+|.|.+|..-++.|++.|.+|++++....+ ...+. ..++.++..++... .+.+++.|+
T Consensus 7 l~gk~vlVvGgG~va~rk~~~Ll~~ga~VtVvsp~~~~~l~~l~~~~~i~~~~~~~~~~---dl~~~~lVi 74 (205)
T TIGR01470 7 LEGRAVLVVGGGDVALRKARLLLKAGAQLRVIAEELESELTLLAEQGGITWLARCFDAD---ILEGAFLVI 74 (205)
T ss_pred cCCCeEEEECcCHHHHHHHHHHHHCCCEEEEEcCCCCHHHHHHHHcCCEEEEeCCCCHH---HhCCcEEEE
Confidence 45689999999999999999999999999999875432 22332 24678888877642 345555544
|
This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms. |
| >PRK14852 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=96.04 E-value=0.041 Score=56.05 Aligned_cols=103 Identities=12% Similarity=0.018 Sum_probs=62.1
Q ss_pred CCCCCeEEEEcCChhhHHHHHHHHhCCC-EEEEEEeCchh-------------------hhh----hh--hC--CceEEE
Q 017914 56 WQSPNRMLILGMGFVGRIFAEKIKNQGW-VVSGTCTNVMK-------------------KKE----LE--QS--GFDVHL 107 (364)
Q Consensus 56 ~~~~~~vlVtGtG~iG~~l~~~L~~~g~-~V~~~~r~~~~-------------------~~~----l~--~~--~~~~~~ 107 (364)
.....+|+|+|.|.+|+.++..|...|. ++++++-+.-. ... +. .+ .++.+.
T Consensus 329 kL~~srVlVvGlGGlGs~ia~~LAraGVG~I~L~D~D~Ve~SNLNRQ~l~~~~dIG~~Kaevaa~~l~~INP~v~I~~~~ 408 (989)
T PRK14852 329 RLLRSRVAIAGLGGVGGIHLMTLARTGIGNFNLADFDAYSPVNLNRQYGASIASFGRGKLDVMTERALSVNPFLDIRSFP 408 (989)
T ss_pred HHhcCcEEEECCcHHHHHHHHHHHHcCCCeEEEEcCCEecccccccccCCChhhCCChHHHHHHHHHHHHCCCCeEEEEe
Confidence 3456799999999999999999999985 45444432111 000 11 12 344555
Q ss_pred ccCChhhH-HhhccCceeeEEEEecCCCCCCCChhhhHHHHHHHHhhcCCccEEEEEcccee
Q 017914 108 FNANETAL-MILTTLKNYTHLLVSIPPLEGTGDPMLKHGELLRSTLMNGHLQWLGYLSSTGV 168 (364)
Q Consensus 108 ~D~~~~~~-~~~~~~d~v~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~r~v~~Ss~~v 168 (364)
..++..+. ..++++|.|+.+... ........+...|...++. +|+.++.+.
T Consensus 409 ~~I~~en~~~fl~~~DiVVDa~D~---------~~~~~rr~l~~~c~~~~IP-~I~ag~~G~ 460 (989)
T PRK14852 409 EGVAAETIDAFLKDVDLLVDGIDF---------FALDIRRRLFNRALELGIP-VITAGPLGY 460 (989)
T ss_pred cCCCHHHHHHHhhCCCEEEECCCC---------ccHHHHHHHHHHHHHcCCC-EEEeecccc
Confidence 55655444 566889988876521 1222334555566777765 777665443
|
|
| >cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E | Back alignment and domain information |
|---|
Probab=96.02 E-value=0.062 Score=45.90 Aligned_cols=35 Identities=20% Similarity=0.243 Sum_probs=29.2
Q ss_pred CCCCeEEEEcCChhhHHHHHHHHhCCC-EEEEEEeC
Q 017914 57 QSPNRMLILGMGFVGRIFAEKIKNQGW-VVSGTCTN 91 (364)
Q Consensus 57 ~~~~~vlVtGtG~iG~~l~~~L~~~g~-~V~~~~r~ 91 (364)
....+|+|+|.|.+|+++++.|.+.|. ++++++.+
T Consensus 9 L~~~~VlVvG~GGvGs~va~~Lar~GVg~i~LvD~D 44 (231)
T cd00755 9 LRNAHVAVVGLGGVGSWAAEALARSGVGKLTLIDFD 44 (231)
T ss_pred HhCCCEEEECCCHHHHHHHHHHHHcCCCEEEEECCC
Confidence 445799999999999999999999995 67766653
|
coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown. |
| >PRK13403 ketol-acid reductoisomerase; Provisional | Back alignment and domain information |
|---|
Probab=96.01 E-value=0.025 Score=50.30 Aligned_cols=66 Identities=18% Similarity=0.227 Sum_probs=48.8
Q ss_pred CCCCeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCChhhHHhhccCceeeEEE
Q 017914 57 QSPNRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETALMILTTLKNYTHLL 128 (364)
Q Consensus 57 ~~~~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~~~~~~~d~v~~~~ 128 (364)
..+++|.|+|.|.+|+.+++.|...|++|++..|.....+.....++++. +.+ ++++..|+|+.+.
T Consensus 14 LkgKtVGIIG~GsIG~amA~nL~d~G~~ViV~~r~~~s~~~A~~~G~~v~-----sl~-Eaak~ADVV~llL 79 (335)
T PRK13403 14 LQGKTVAVIGYGSQGHAQAQNLRDSGVEVVVGVRPGKSFEVAKADGFEVM-----SVS-EAVRTAQVVQMLL 79 (335)
T ss_pred hCcCEEEEEeEcHHHHHHHHHHHHCcCEEEEEECcchhhHHHHHcCCEEC-----CHH-HHHhcCCEEEEeC
Confidence 45789999999999999999999999999998876433222333455331 222 6778899888876
|
|
| >TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal | Back alignment and domain information |
|---|
Probab=96.01 E-value=0.015 Score=49.61 Aligned_cols=64 Identities=17% Similarity=0.165 Sum_probs=43.2
Q ss_pred EEEE-c-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCChhhH---------HhhccCceeeEEEEe
Q 017914 62 MLIL-G-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETAL---------MILTTLKNYTHLLVS 130 (364)
Q Consensus 62 vlVt-G-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~---------~~~~~~d~v~~~~~~ 130 (364)
=.|+ . +|.||+++++.|+++|++|+++++... +.... ...+|+.+.+. ..+..+|+++|+|+.
T Consensus 17 R~itN~SSGgIG~AIA~~la~~Ga~Vvlv~~~~~----l~~~~--~~~~Dv~d~~s~~~l~~~v~~~~g~iDiLVnnAgv 90 (227)
T TIGR02114 17 RSITNHSTGHLGKIITETFLSAGHEVTLVTTKRA----LKPEP--HPNLSIREIETTKDLLITLKELVQEHDILIHSMAV 90 (227)
T ss_pred eeecCCcccHHHHHHHHHHHHCCCEEEEEcChhh----ccccc--CCcceeecHHHHHHHHHHHHHHcCCCCEEEECCEe
Confidence 3566 4 799999999999999999999876321 11011 12457766432 123468999999975
Q ss_pred c
Q 017914 131 I 131 (364)
Q Consensus 131 ~ 131 (364)
.
T Consensus 91 ~ 91 (227)
T TIGR02114 91 S 91 (227)
T ss_pred c
Confidence 4
|
In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity. |
| >cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase | Back alignment and domain information |
|---|
Probab=96.01 E-value=0.053 Score=49.41 Aligned_cols=93 Identities=19% Similarity=0.196 Sum_probs=60.3
Q ss_pred CCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhh-CCceEEEccCCh-hhH----Hhh--ccCceeeEEE
Q 017914 58 SPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQ-SGFDVHLFNANE-TAL----MIL--TTLKNYTHLL 128 (364)
Q Consensus 58 ~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~-~~~~~~~~D~~~-~~~----~~~--~~~d~v~~~~ 128 (364)
.+.+|||+| +|.+|..+++.+...|.+|++.+++.++.+.+.+ .++..+ .|..+ .++ ... .++|.|+.++
T Consensus 151 ~g~~VlI~Ga~G~vG~~aiqlAk~~G~~Vi~~~~~~~~~~~~~~~lGa~~v-i~~~~~~~~~~~i~~~~~~gvd~v~d~~ 229 (338)
T cd08295 151 KGETVFVSAASGAVGQLVGQLAKLKGCYVVGSAGSDEKVDLLKNKLGFDDA-FNYKEEPDLDAALKRYFPNGIDIYFDNV 229 (338)
T ss_pred CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCcee-EEcCCcccHHHHHHHhCCCCcEEEEECC
Confidence 457999999 7999999999999999999999998887776654 555432 23221 121 111 3567777655
Q ss_pred EecCCCCCCCChhhhHHHHHHHHhhcCCccEEEEEcc
Q 017914 129 VSIPPLEGTGDPMLKHGELLRSTLMNGHLQWLGYLSS 165 (364)
Q Consensus 129 ~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~r~v~~Ss 165 (364)
+. ......+..++..| +++.++.
T Consensus 230 g~------------~~~~~~~~~l~~~G--~iv~~G~ 252 (338)
T cd08295 230 GG------------KMLDAVLLNMNLHG--RIAACGM 252 (338)
T ss_pred CH------------HHHHHHHHHhccCc--EEEEecc
Confidence 31 12234455555554 6876654
|
This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in |
| >KOG4022 consensus Dihydropteridine reductase DHPR/QDPR [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.00 E-value=0.41 Score=37.82 Aligned_cols=189 Identities=12% Similarity=0.078 Sum_probs=97.9
Q ss_pred CeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCChhh--H-------Hhh--ccCceeeEE
Q 017914 60 NRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETA--L-------MIL--TTLKNYTHL 127 (364)
Q Consensus 60 ~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~--~-------~~~--~~~d~v~~~ 127 (364)
.+|+|-| -|.+|++.++.+.+++|-|.-++-....... .-.++.+|-.-.+ . +.+ +.+|+|+.+
T Consensus 4 grVivYGGkGALGSacv~~FkannywV~siDl~eNe~Ad----~sI~V~~~~swtEQe~~v~~~vg~sL~gekvDav~CV 79 (236)
T KOG4022|consen 4 GRVIVYGGKGALGSACVEFFKANNYWVLSIDLSENEQAD----SSILVDGNKSWTEQEQSVLEQVGSSLQGEKVDAVFCV 79 (236)
T ss_pred ceEEEEcCcchHhHHHHHHHHhcCeEEEEEeeccccccc----ceEEecCCcchhHHHHHHHHHHHHhhcccccceEEEe
Confidence 5889998 8999999999999999999888875433211 1122222222111 1 122 568999999
Q ss_pred EEecCCCCCC-C----ChhhhHHH-----HHHHHhh--cCCccEEEEEccc-eeecCCCCccccCCCCCCCCChhHHHHH
Q 017914 128 LVSIPPLEGT-G----DPMLKHGE-----LLRSTLM--NGHLQWLGYLSST-GVYGHSGGAWVDEDYPANPTTELGRLRL 194 (364)
Q Consensus 128 ~~~~~~~~~~-~----~~~~~~~~-----~l~~a~~--~~~~~r~v~~Ss~-~vy~~~~~~~~~E~~~~~~~~~Y~~sK~ 194 (364)
++........ . +....... .+-..+. ..+..-++.+... ...+.. ...-.|+..|.
T Consensus 80 AGGWAGGnAksKdl~KNaDLMwKQSvwtSaIsa~lAt~HLK~GGLL~LtGAkaAl~gT-----------PgMIGYGMAKa 148 (236)
T KOG4022|consen 80 AGGWAGGNAKSKDLVKNADLMWKQSVWTSAISAKLATTHLKPGGLLQLTGAKAALGGT-----------PGMIGYGMAKA 148 (236)
T ss_pred eccccCCCcchhhhhhchhhHHHHHHHHHHHHHHHHHhccCCCceeeecccccccCCC-----------CcccchhHHHH
Confidence 9765443211 1 11111111 1111111 1112224443322 122111 12357999999
Q ss_pred HHHHHHHHhh-hhcCCcEEE----EEecceecCCCChHHHHHHhcCcccccccccCCcccccccHHHHHHHHHHHccC--
Q 017914 195 SAEKGWLNLG-RDLGISAQV----FRLGGIYGPGRSSVDTIIKQLPLSEGQKMRRARQYTSRIHVDDICQVLSASIDK-- 267 (364)
Q Consensus 195 ~~E~~~~~~~-~~~~~~~~i----lRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~-- 267 (364)
+..++.+.++ +++|++--. +-|-.+- .+ ++...++. ...-+|+....+++.++.-...
T Consensus 149 AVHqLt~SLaak~SGlP~gsaa~~ilPVTLD----TP----MNRKwMP~-------ADfssWTPL~fi~e~flkWtt~~~ 213 (236)
T KOG4022|consen 149 AVHQLTSSLAAKDSGLPDGSAALTILPVTLD----TP----MNRKWMPN-------ADFSSWTPLSFISEHFLKWTTETS 213 (236)
T ss_pred HHHHHHHHhcccccCCCCCceeEEEeeeecc----Cc----cccccCCC-------CcccCcccHHHHHHHHHHHhccCC
Confidence 9999999886 445665221 1121111 11 11111111 1234678888888888776643
Q ss_pred -CCCCceEEEeC
Q 017914 268 -PSAWNVYNVVD 278 (364)
Q Consensus 268 -~~~g~~~~i~~ 278 (364)
+..|....+..
T Consensus 214 RPssGsLlqi~T 225 (236)
T KOG4022|consen 214 RPSSGSLLQITT 225 (236)
T ss_pred CCCCCceEEEEe
Confidence 34465555543
|
|
| >PTZ00142 6-phosphogluconate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.00 E-value=0.038 Score=52.46 Aligned_cols=41 Identities=20% Similarity=0.353 Sum_probs=37.0
Q ss_pred CeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhh
Q 017914 60 NRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQ 100 (364)
Q Consensus 60 ~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~ 100 (364)
.+|.|+|.|.+|..+++.|.++||+|++.+|++++.+.+.+
T Consensus 2 ~~IgvIGLG~MG~~lA~nL~~~G~~V~v~dr~~~~~~~l~~ 42 (470)
T PTZ00142 2 SDIGLIGLAVMGQNLALNIASRGFKISVYNRTYEKTEEFVK 42 (470)
T ss_pred CEEEEEeEhHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHH
Confidence 57999999999999999999999999999999988766643
|
|
| >PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional | Back alignment and domain information |
|---|
Probab=95.99 E-value=0.068 Score=48.03 Aligned_cols=66 Identities=18% Similarity=0.244 Sum_probs=47.2
Q ss_pred CCCCeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCChhhHHhhccCceeeEEEE
Q 017914 57 QSPNRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETALMILTTLKNYTHLLV 129 (364)
Q Consensus 57 ~~~~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~~~~~~~d~v~~~~~ 129 (364)
..+++|.|+|.|.||+.+++.|...|++|++.+|...... ++..+. ...+.+ +.+.++|+|+.+..
T Consensus 134 l~g~tvgIvG~G~IG~~vA~~l~afG~~V~~~~~~~~~~~-----~~~~~~-~~~~l~-e~l~~aDvvv~~lP 199 (312)
T PRK15469 134 REDFTIGILGAGVLGSKVAQSLQTWGFPLRCWSRSRKSWP-----GVQSFA-GREELS-AFLSQTRVLINLLP 199 (312)
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCCCCCC-----Cceeec-ccccHH-HHHhcCCEEEECCC
Confidence 4568999999999999999999999999999998654321 222111 111112 67888998887663
|
|
| >PRK06545 prephenate dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=95.98 E-value=0.014 Score=53.64 Aligned_cols=67 Identities=19% Similarity=0.156 Sum_probs=44.6
Q ss_pred CeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccC-ChhhHHhhccCceeeEEE
Q 017914 60 NRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNA-NETALMILTTLKNYTHLL 128 (364)
Q Consensus 60 ~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~-~~~~~~~~~~~d~v~~~~ 128 (364)
++|.|+|+|.+|..++..|.+.|++|.+.++++.........+...+. +. ++.+ ..+.++|.|+-++
T Consensus 1 ~~I~iIG~GliG~siA~~L~~~G~~v~i~~~~~~~~~~~~a~~~~~~~-~~~~~~~-~~~~~aDlVilav 68 (359)
T PRK06545 1 RTVLIVGLGLIGGSLALAIKAAGPDVFIIGYDPSAAQLARALGFGVID-ELAADLQ-RAAAEADLIVLAV 68 (359)
T ss_pred CeEEEEEeCHHHHHHHHHHHhcCCCeEEEEeCCCHHHHHHHhcCCCCc-ccccCHH-HHhcCCCEEEEeC
Confidence 478999999999999999999999999998876654332212221111 11 1111 4567788777765
|
|
| >PRK12491 pyrroline-5-carboxylate reductase; Reviewed | Back alignment and domain information |
|---|
Probab=95.98 E-value=0.021 Score=50.30 Aligned_cols=65 Identities=12% Similarity=0.159 Sum_probs=47.3
Q ss_pred CCeEEEEcCChhhHHHHHHHHhCCC----EEEEEEeCchhhhhhhh-CCceEEEccCChhhHHhhccCceeeEEE
Q 017914 59 PNRMLILGMGFVGRIFAEKIKNQGW----VVSGTCTNVMKKKELEQ-SGFDVHLFNANETALMILTTLKNYTHLL 128 (364)
Q Consensus 59 ~~~vlVtGtG~iG~~l~~~L~~~g~----~V~~~~r~~~~~~~l~~-~~~~~~~~D~~~~~~~~~~~~d~v~~~~ 128 (364)
.++|.++|+|.+|.++++.|.+.|+ +|++.+|+.++...+.+ .++... .+.. +.+.++|.|+.+.
T Consensus 2 ~~~IgfIG~G~MG~aia~~L~~~g~~~~~~I~v~~r~~~~~~~l~~~~g~~~~----~~~~-e~~~~aDiIiLav 71 (272)
T PRK12491 2 NKQIGFIGCGNMGIAMIGGMINKNIVSPDQIICSDLNVSNLKNASDKYGITIT----TNNN-EVANSADILILSI 71 (272)
T ss_pred CCeEEEECccHHHHHHHHHHHHCCCCCCceEEEECCCHHHHHHHHHhcCcEEe----CCcH-HHHhhCCEEEEEe
Confidence 4689999999999999999999875 79999998877665543 444321 1111 3566788887766
|
|
| >PLN02350 phosphogluconate dehydrogenase (decarboxylating) | Back alignment and domain information |
|---|
Probab=95.97 E-value=0.035 Score=52.88 Aligned_cols=43 Identities=21% Similarity=0.290 Sum_probs=38.3
Q ss_pred CCCCeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCchhhhhhh
Q 017914 57 QSPNRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELE 99 (364)
Q Consensus 57 ~~~~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~ 99 (364)
..+++|-++|.|.+|+.+++.|+++||+|++.+|++++.+.+.
T Consensus 4 ~~~~~IG~IGLG~MG~~mA~nL~~~G~~V~V~NRt~~k~~~l~ 46 (493)
T PLN02350 4 AALSRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETV 46 (493)
T ss_pred CCCCCEEEEeeHHHHHHHHHHHHhCCCeEEEECCCHHHHHHHH
Confidence 4456899999999999999999999999999999988877654
|
|
| >cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase | Back alignment and domain information |
|---|
Probab=95.94 E-value=0.02 Score=51.49 Aligned_cols=70 Identities=16% Similarity=0.198 Sum_probs=50.2
Q ss_pred CCCCeEEEEcCChhhHHHHHHHHhCC-CEEEEEEeCchhhhhhhh-CCceEEEccCChhhHHhhccCceeeEEEE
Q 017914 57 QSPNRMLILGMGFVGRIFAEKIKNQG-WVVSGTCTNVMKKKELEQ-SGFDVHLFNANETALMILTTLKNYTHLLV 129 (364)
Q Consensus 57 ~~~~~vlVtGtG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~l~~-~~~~~~~~D~~~~~~~~~~~~d~v~~~~~ 129 (364)
..+++|+|+|+|.+|+.+++.|...| .+|++.+|+.++...+.. .+...+. ..+.. ..+..+|+|+.+..
T Consensus 176 l~~~~V~ViGaG~iG~~~a~~L~~~g~~~V~v~~r~~~ra~~la~~~g~~~~~--~~~~~-~~l~~aDvVi~at~ 247 (311)
T cd05213 176 LKGKKVLVIGAGEMGELAAKHLAAKGVAEITIANRTYERAEELAKELGGNAVP--LDELL-ELLNEADVVISATG 247 (311)
T ss_pred ccCCEEEEECcHHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHcCCeEEe--HHHHH-HHHhcCCEEEECCC
Confidence 45789999999999999999999876 789999999877655432 2333322 22211 45677898888764
|
Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, |
| >TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type | Back alignment and domain information |
|---|
Probab=95.94 E-value=0.026 Score=50.01 Aligned_cols=71 Identities=14% Similarity=0.034 Sum_probs=48.8
Q ss_pred CCCeEEEEcCChhhHHHHHHHHhCCC-EEEEEEeCchhhhhhhhC---CceEEEccCChhhH-HhhccCceeeEEEE
Q 017914 58 SPNRMLILGMGFVGRIFAEKIKNQGW-VVSGTCTNVMKKKELEQS---GFDVHLFNANETAL-MILTTLKNYTHLLV 129 (364)
Q Consensus 58 ~~~~vlVtGtG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~l~~~---~~~~~~~D~~~~~~-~~~~~~d~v~~~~~ 129 (364)
.+++|+|+|+|..|+.++..|.+.|. +|+++.|+.++.+.+.+. .......+.. .+. ..+.+.|.|+++..
T Consensus 124 ~~k~vlvlGaGGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~~~~~~~~~~~~-~~~~~~~~~~DiVInaTp 199 (282)
T TIGR01809 124 AGFRGLVIGAGGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGVQVGVITRLEGD-SGGLAIEKAAEVLVSTVP 199 (282)
T ss_pred CCceEEEEcCcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhhhcCcceeccch-hhhhhcccCCCEEEECCC
Confidence 46789999999999999999999996 799999998887766431 1111111111 111 34467788887653
|
This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway. |
| >PRK12549 shikimate 5-dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=95.93 E-value=0.021 Score=50.65 Aligned_cols=43 Identities=21% Similarity=0.207 Sum_probs=37.3
Q ss_pred CCCCeEEEEcCChhhHHHHHHHHhCCC-EEEEEEeCchhhhhhh
Q 017914 57 QSPNRMLILGMGFVGRIFAEKIKNQGW-VVSGTCTNVMKKKELE 99 (364)
Q Consensus 57 ~~~~~vlVtGtG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~l~ 99 (364)
...++|+|+|+|..|++++..|.+.|. +|++++|+.++.+.+.
T Consensus 125 ~~~k~vlIlGaGGaaraia~aL~~~G~~~I~I~nR~~~ka~~la 168 (284)
T PRK12549 125 ASLERVVQLGAGGAGAAVAHALLTLGVERLTIFDVDPARAAALA 168 (284)
T ss_pred ccCCEEEEECCcHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH
Confidence 345799999999999999999999997 8999999988776653
|
|
| >PF01262 AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal domain; InterPro: IPR007698 Alanine dehydrogenases (1 | Back alignment and domain information |
|---|
Probab=95.91 E-value=0.036 Score=44.96 Aligned_cols=52 Identities=25% Similarity=0.244 Sum_probs=40.9
Q ss_pred CCCeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEcc
Q 017914 58 SPNRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFN 109 (364)
Q Consensus 58 ~~~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D 109 (364)
...+|+|+|+|.+|..-++.|...|++|+.++..+.....+.......+..+
T Consensus 19 ~p~~vvv~G~G~vg~gA~~~~~~lGa~v~~~d~~~~~~~~~~~~~~~~i~~~ 70 (168)
T PF01262_consen 19 PPAKVVVTGAGRVGQGAAEIAKGLGAEVVVPDERPERLRQLESLGAYFIEVD 70 (168)
T ss_dssp -T-EEEEESTSHHHHHHHHHHHHTT-EEEEEESSHHHHHHHHHTTTEESEET
T ss_pred CCeEEEEECCCHHHHHHHHHHhHCCCEEEeccCCHHHHHhhhcccCceEEEc
Confidence 3479999999999999999999999999999998877666665555555554
|
4.1.1 from EC) and pyridine nucleotide transhydrogenase (1.6.1.1 from EC) have been shown to share regions of similarity []. Alanine dehydrogenase catalyzes the NAD-dependent reversible reductive amination of pyruvate into alanine. Pyridine nucleotide transhydrogenase catalyzes the reduction of NADP+ to NADPH with the concomitant oxidation of NADH to NAD+. This enzyme is located in the plasma membrane of prokaryotes and in the inner membrane of the mitochondria of eukaryotes. The transhydrogenation between NADH and NADP is coupled with the translocation of a proton across the membrane. In prokaryotes the enzyme is composed of two different subunits, an alpha chain (gene pntA) and a beta chain (gene pntB), while in eukaryotes it is a single chain protein. The sequence of alanine dehydrogenase from several bacterial species are related with those of the alpha subunit of bacterial pyridine nucleotide transhydrogenase and of the N-terminal half of the eukaryotic enzyme. The two most conserved regions correspond respectively to the N-terminal extremity of these proteins and to a central glycine-rich region which is part of the NAD(H)-binding site. This is a C-terminal domain of alanine dehydrogenases (1.4.1.1 from EC). This domain is also found in the lysine 2-oxoglutarate reductases. ; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1KOL_A 2EEZ_F 1L7E_C 1PTJ_B 1NM5_A 1HZZ_B 1U2G_B 2FSV_A 2FR8_A 1U2D_A .... |
| >TIGR03840 TMPT_Se_Te thiopurine S-methyltransferase, Se/Te detoxification family | Back alignment and domain information |
|---|
Probab=95.90 E-value=0.057 Score=45.65 Aligned_cols=94 Identities=12% Similarity=0.003 Sum_probs=59.8
Q ss_pred CCCeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCchhhhhhh-------------------hCCceEEEccCChhhHHhh
Q 017914 58 SPNRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELE-------------------QSGFDVHLFNANETALMIL 118 (364)
Q Consensus 58 ~~~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~-------------------~~~~~~~~~D~~~~~~~~~ 118 (364)
.+.+||+.|+|- |+ =+..|+++|++|++++.++.-.+.+. ..+++++.+|+.+.+....
T Consensus 34 ~~~rvLd~GCG~-G~-da~~LA~~G~~V~gvD~S~~Ai~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~ 111 (213)
T TIGR03840 34 AGARVFVPLCGK-SL-DLAWLAEQGHRVLGVELSEIAVEQFFAENGLTPTVTQQGEFTRYRAGNIEIFCGDFFALTAADL 111 (213)
T ss_pred CCCeEEEeCCCc-hh-HHHHHHhCCCeEEEEeCCHHHHHHHHHHcCCCcceeccccceeeecCceEEEEccCCCCCcccC
Confidence 346999999774 44 44577789999999999876544321 1357788899987553223
Q ss_pred ccCceeeEEEEecCCCCCCCChhhhHHHHHHHHhhcCC
Q 017914 119 TTLKNYTHLLVSIPPLEGTGDPMLKHGELLRSTLMNGH 156 (364)
Q Consensus 119 ~~~d~v~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~ 156 (364)
..+|.|+..+...... .+.......++..+++..|
T Consensus 112 ~~fD~i~D~~~~~~l~---~~~R~~~~~~l~~lLkpgG 146 (213)
T TIGR03840 112 GPVDAVYDRAALIALP---EEMRQRYAAHLLALLPPGA 146 (213)
T ss_pred CCcCEEEechhhccCC---HHHHHHHHHHHHHHcCCCC
Confidence 4578777765432211 1222345567777777666
|
Members of this family are thiopurine S-methyltransferase from a branch in which at least some member proteins can perform selenium methylation as a means to detoxify selenium, or perform a related detoxification of tellurium. Note that the EC number definition does not specify a particular thiopurine, but rather represents a class of activity. |
| >cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity | Back alignment and domain information |
|---|
Probab=95.89 E-value=0.058 Score=48.78 Aligned_cols=94 Identities=20% Similarity=0.220 Sum_probs=61.6
Q ss_pred CCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCChhhH----Hhh--ccCceeeEEEEe
Q 017914 58 SPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETAL----MIL--TTLKNYTHLLVS 130 (364)
Q Consensus 58 ~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~----~~~--~~~d~v~~~~~~ 130 (364)
.+.+|||.| +|.+|..+++.+...|.+|++.++++++.+.+.+.++..+ .|..+.++ ... .++|.|+.+++.
T Consensus 143 ~g~~vlI~ga~g~vG~~aiqlA~~~G~~vi~~~~s~~~~~~l~~~Ga~~v-i~~~~~~~~~~v~~~~~~gvd~vld~~g~ 221 (329)
T cd08294 143 AGETVVVNGAAGAVGSLVGQIAKIKGCKVIGCAGSDDKVAWLKELGFDAV-FNYKTVSLEEALKEAAPDGIDCYFDNVGG 221 (329)
T ss_pred CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCEE-EeCCCccHHHHHHHHCCCCcEEEEECCCH
Confidence 457999998 8999999999999999999999998888777766665432 34433332 111 346777765531
Q ss_pred cCCCCCCCChhhhHHHHHHHHhhcCCccEEEEEccc
Q 017914 131 IPPLEGTGDPMLKHGELLRSTLMNGHLQWLGYLSST 166 (364)
Q Consensus 131 ~~~~~~~~~~~~~~~~~l~~a~~~~~~~r~v~~Ss~ 166 (364)
.........++..| +++.++..
T Consensus 222 ------------~~~~~~~~~l~~~G--~iv~~g~~ 243 (329)
T cd08294 222 ------------EFSSTVLSHMNDFG--RVAVCGSI 243 (329)
T ss_pred ------------HHHHHHHHhhccCC--EEEEEcch
Confidence 11233344454444 78877653
|
Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac |
| >PTZ00082 L-lactate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.89 E-value=0.034 Score=50.16 Aligned_cols=69 Identities=13% Similarity=-0.020 Sum_probs=48.1
Q ss_pred CCCeEEEEcCChhhHHHHHHHHhCCC-EEEEEEeCchhhh--hhh--h----C--CceEEE-ccCChhhHHhhccCceee
Q 017914 58 SPNRMLILGMGFVGRIFAEKIKNQGW-VVSGTCTNVMKKK--ELE--Q----S--GFDVHL-FNANETALMILTTLKNYT 125 (364)
Q Consensus 58 ~~~~vlVtGtG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~--~l~--~----~--~~~~~~-~D~~~~~~~~~~~~d~v~ 125 (364)
..+||.|+|+|.+|+.++..++..|. +|++++++++... .+. . . ...+.. .| .+.++++|.|+
T Consensus 5 ~~~KI~IIGaG~vG~~ia~~la~~gl~~i~LvDi~~~~~~~~~ld~~~~~~~~~~~~~I~~~~d-----~~~l~~aDiVI 79 (321)
T PTZ00082 5 KRRKISLIGSGNIGGVMAYLIVLKNLGDVVLFDIVKNIPQGKALDISHSNVIAGSNSKVIGTNN-----YEDIAGSDVVI 79 (321)
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCCchhhHHHHHHHhhhhccCCCeEEEECCC-----HHHhCCCCEEE
Confidence 34799999999999999999999995 8999998776432 111 0 1 112221 22 24678999999
Q ss_pred EEEEec
Q 017914 126 HLLVSI 131 (364)
Q Consensus 126 ~~~~~~ 131 (364)
..++..
T Consensus 80 ~tag~~ 85 (321)
T PTZ00082 80 VTAGLT 85 (321)
T ss_pred ECCCCC
Confidence 988653
|
|
| >KOG0409 consensus Predicted dehydrogenase [General function prediction only] | Back alignment and domain information |
|---|
Probab=95.88 E-value=0.03 Score=48.72 Aligned_cols=68 Identities=18% Similarity=0.266 Sum_probs=52.2
Q ss_pred CCCeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCChhhHHhhccCceeeEEEEe
Q 017914 58 SPNRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETALMILTTLKNYTHLLVS 130 (364)
Q Consensus 58 ~~~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~~~~~~~d~v~~~~~~ 130 (364)
..++|=-+|.|..|+.++..|++.||+|++.+|..++.+.+.+.+.++ .+...+..+.+|+||.+...
T Consensus 34 s~~~iGFIGLG~MG~~M~~nLik~G~kVtV~dr~~~k~~~f~~~Ga~v-----~~sPaeVae~sDvvitmv~~ 101 (327)
T KOG0409|consen 34 SKTRIGFIGLGNMGSAMVSNLIKAGYKVTVYDRTKDKCKEFQEAGARV-----ANSPAEVAEDSDVVITMVPN 101 (327)
T ss_pred ccceeeEEeeccchHHHHHHHHHcCCEEEEEeCcHHHHHHHHHhchhh-----hCCHHHHHhhcCEEEEEcCC
Confidence 457898999999999999999999999999999999888877666432 22222555667777766643
|
|
| >cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Probab=95.88 E-value=0.075 Score=48.05 Aligned_cols=94 Identities=21% Similarity=0.123 Sum_probs=59.8
Q ss_pred CCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCCh--hhHHhhccCceeeEEEEecCCC
Q 017914 58 SPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANE--TALMILTTLKNYTHLLVSIPPL 134 (364)
Q Consensus 58 ~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~--~~~~~~~~~d~v~~~~~~~~~~ 134 (364)
.+.+|||+| +|.+|..+++.+...|.+|+++++++++.+.+...+...+ .|..+ .......++|.++++++..
T Consensus 162 ~~~~vlI~ga~g~vG~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~d~v~~~~g~~--- 237 (332)
T cd08259 162 KGDTVLVTGAGGGVGIHAIQLAKALGARVIAVTRSPEKLKILKELGADYV-IDGSKFSEDVKKLGGADVVIELVGSP--- 237 (332)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHcCCcEE-EecHHHHHHHHhccCCCEEEECCChH---
Confidence 456899999 8999999999999999999999998776665544443221 23322 1112223678887765320
Q ss_pred CCCCChhhhHHHHHHHHhhcCCccEEEEEccc
Q 017914 135 EGTGDPMLKHGELLRSTLMNGHLQWLGYLSST 166 (364)
Q Consensus 135 ~~~~~~~~~~~~~l~~a~~~~~~~r~v~~Ss~ 166 (364)
........+...| ++|.++..
T Consensus 238 ---------~~~~~~~~~~~~g--~~v~~g~~ 258 (332)
T cd08259 238 ---------TIEESLRSLNKGG--RLVLIGNV 258 (332)
T ss_pred ---------HHHHHHHHhhcCC--EEEEEcCC
Confidence 1233444444443 68877653
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. |
| >PRK13243 glyoxylate reductase; Reviewed | Back alignment and domain information |
|---|
Probab=95.88 E-value=0.041 Score=49.98 Aligned_cols=66 Identities=14% Similarity=0.113 Sum_probs=47.5
Q ss_pred CCCCeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCChhhHHhhccCceeeEEEE
Q 017914 57 QSPNRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETALMILTTLKNYTHLLV 129 (364)
Q Consensus 57 ~~~~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~~~~~~~d~v~~~~~ 129 (364)
..+++|.|+|.|.||+.+++.|...|.+|++.+|...... ....++. ..+.+ +.+..+|.|+.+..
T Consensus 148 L~gktvgIiG~G~IG~~vA~~l~~~G~~V~~~d~~~~~~~-~~~~~~~-----~~~l~-ell~~aDiV~l~lP 213 (333)
T PRK13243 148 VYGKTIGIIGFGRIGQAVARRAKGFGMRILYYSRTRKPEA-EKELGAE-----YRPLE-ELLRESDFVSLHVP 213 (333)
T ss_pred CCCCEEEEECcCHHHHHHHHHHHHCCCEEEEECCCCChhh-HHHcCCE-----ecCHH-HHHhhCCEEEEeCC
Confidence 4678999999999999999999999999999998754321 1111221 11222 56788898887763
|
|
| >PRK00045 hemA glutamyl-tRNA reductase; Reviewed | Back alignment and domain information |
|---|
Probab=95.86 E-value=0.028 Score=52.91 Aligned_cols=70 Identities=17% Similarity=0.239 Sum_probs=50.4
Q ss_pred CCCCeEEEEcCChhhHHHHHHHHhCCC-EEEEEEeCchhhhhhhh-CCceEEEccCChhhHHhhccCceeeEEEE
Q 017914 57 QSPNRMLILGMGFVGRIFAEKIKNQGW-VVSGTCTNVMKKKELEQ-SGFDVHLFNANETALMILTTLKNYTHLLV 129 (364)
Q Consensus 57 ~~~~~vlVtGtG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~l~~-~~~~~~~~D~~~~~~~~~~~~d~v~~~~~ 129 (364)
..+++|+|+|+|.+|+.+++.|...|. +|++.+|+.++...+.. .+...+ ++.+.. ..+.++|+|+.+.+
T Consensus 180 ~~~~~vlViGaG~iG~~~a~~L~~~G~~~V~v~~r~~~ra~~la~~~g~~~~--~~~~~~-~~l~~aDvVI~aT~ 251 (423)
T PRK00045 180 LSGKKVLVIGAGEMGELVAKHLAEKGVRKITVANRTLERAEELAEEFGGEAI--PLDELP-EALAEADIVISSTG 251 (423)
T ss_pred ccCCEEEEECchHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcCCcEe--eHHHHH-HHhccCCEEEECCC
Confidence 456899999999999999999999997 89999998877654432 232222 222211 55678898888764
|
|
| >cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity | Back alignment and domain information |
|---|
Probab=95.80 E-value=0.04 Score=49.50 Aligned_cols=70 Identities=16% Similarity=0.075 Sum_probs=45.6
Q ss_pred CeEEEEc-CChhhHHHHHHHHhCCC--EEEEEEeCc--hhhhh----hhh----CCceEEEccCChhhHHhhccCceeeE
Q 017914 60 NRMLILG-MGFVGRIFAEKIKNQGW--VVSGTCTNV--MKKKE----LEQ----SGFDVHLFNANETALMILTTLKNYTH 126 (364)
Q Consensus 60 ~~vlVtG-tG~iG~~l~~~L~~~g~--~V~~~~r~~--~~~~~----l~~----~~~~~~~~D~~~~~~~~~~~~d~v~~ 126 (364)
|+|.|+| +|.+|..++..|+..|+ +|++++|.. +.... +.+ .+... ....+ .+...+.++|+|+.
T Consensus 1 ~kI~IiGatG~vG~~~a~~l~~~g~~~~v~lvd~~~~~~~l~~~~~dl~d~~~~~~~~~-~i~~~-~d~~~l~~aDiVii 78 (309)
T cd05294 1 MKVSIIGASGRVGSATALLLAKEDVVKEINLISRPKSLEKLKGLRLDIYDALAAAGIDA-EIKIS-SDLSDVAGSDIVII 78 (309)
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEECcccccccccccchhhhchhccCCCc-EEEEC-CCHHHhCCCCEEEE
Confidence 6899999 79999999999999986 599999953 22211 100 11110 11111 11346899999999
Q ss_pred EEEec
Q 017914 127 LLVSI 131 (364)
Q Consensus 127 ~~~~~ 131 (364)
+++..
T Consensus 79 tag~p 83 (309)
T cd05294 79 TAGVP 83 (309)
T ss_pred ecCCC
Confidence 88753
|
The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox |
| >cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase | Back alignment and domain information |
|---|
Probab=95.80 E-value=0.028 Score=45.50 Aligned_cols=56 Identities=11% Similarity=0.026 Sum_probs=43.2
Q ss_pred CCCCCeEEEEcCCh-hhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCChhhHHhhccCceeeEEEEe
Q 017914 56 WQSPNRMLILGMGF-VGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETALMILTTLKNYTHLLVS 130 (364)
Q Consensus 56 ~~~~~~vlVtGtG~-iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~~~~~~~d~v~~~~~~ 130 (364)
...+++|||+|+|. +|..+++.|.++|.+|++..|+.++. .+.+..+|.|+...+.
T Consensus 41 ~l~gk~vlViG~G~~~G~~~a~~L~~~g~~V~v~~r~~~~l-------------------~~~l~~aDiVIsat~~ 97 (168)
T cd01080 41 DLAGKKVVVVGRSNIVGKPLAALLLNRNATVTVCHSKTKNL-------------------KEHTKQADIVIVAVGK 97 (168)
T ss_pred CCCCCEEEEECCcHHHHHHHHHHHhhCCCEEEEEECCchhH-------------------HHHHhhCCEEEEcCCC
Confidence 46779999999765 69999999999999999999863211 1466778888877643
|
NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a |
| >COG2084 MmsB 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=95.80 E-value=0.028 Score=49.36 Aligned_cols=65 Identities=17% Similarity=0.207 Sum_probs=49.7
Q ss_pred CeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCchh-hhhhhhCCceEEEccCChhhHHhhccCceeeEEEE
Q 017914 60 NRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMK-KKELEQSGFDVHLFNANETALMILTTLKNYTHLLV 129 (364)
Q Consensus 60 ~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~~-~~~l~~~~~~~~~~D~~~~~~~~~~~~d~v~~~~~ 129 (364)
++|-++|.|..|..++..|+++||+|++.+|++++ .+.+...+..... ++ .+.....|+|+-+..
T Consensus 1 ~kIafIGLG~MG~pmA~~L~~aG~~v~v~~r~~~ka~~~~~~~Ga~~a~----s~-~eaa~~aDvVitmv~ 66 (286)
T COG2084 1 MKIAFIGLGIMGSPMAANLLKAGHEVTVYNRTPEKAAELLAAAGATVAA----SP-AEAAAEADVVITMLP 66 (286)
T ss_pred CeEEEEcCchhhHHHHHHHHHCCCEEEEEeCChhhhhHHHHHcCCcccC----CH-HHHHHhCCEEEEecC
Confidence 47899999999999999999999999999999888 4444444544321 11 156678888888874
|
|
| >PRK06849 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=95.77 E-value=0.072 Score=49.64 Aligned_cols=37 Identities=19% Similarity=0.105 Sum_probs=32.5
Q ss_pred CCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchh
Q 017914 58 SPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMK 94 (364)
Q Consensus 58 ~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~ 94 (364)
.+|+||||| ...+|..+++.|.+.|++|++++..+..
T Consensus 3 ~~~~VLI~G~~~~~~l~iar~l~~~G~~Vi~~d~~~~~ 40 (389)
T PRK06849 3 TKKTVLITGARAPAALELARLFHNAGHTVILADSLKYP 40 (389)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchH
Confidence 468999999 5669999999999999999999987543
|
|
| >PLN03139 formate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.76 E-value=0.057 Score=49.82 Aligned_cols=68 Identities=12% Similarity=0.082 Sum_probs=47.9
Q ss_pred CCCCCeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCChhhHHhhccCceeeEEE
Q 017914 56 WQSPNRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETALMILTTLKNYTHLL 128 (364)
Q Consensus 56 ~~~~~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~~~~~~~d~v~~~~ 128 (364)
...+++|.|+|.|.||+.+++.|..-|.+|++.+|.....+.....++..+ .+.+ +.+..+|+|+.+.
T Consensus 196 ~L~gktVGIVG~G~IG~~vA~~L~afG~~V~~~d~~~~~~~~~~~~g~~~~----~~l~-ell~~sDvV~l~l 263 (386)
T PLN03139 196 DLEGKTVGTVGAGRIGRLLLQRLKPFNCNLLYHDRLKMDPELEKETGAKFE----EDLD-AMLPKCDVVVINT 263 (386)
T ss_pred CCCCCEEEEEeecHHHHHHHHHHHHCCCEEEEECCCCcchhhHhhcCceec----CCHH-HHHhhCCEEEEeC
Confidence 356789999999999999999999999999999987533222222233221 1222 5677889888765
|
|
| >PRK09599 6-phosphogluconate dehydrogenase-like protein; Reviewed | Back alignment and domain information |
|---|
Probab=95.75 E-value=0.021 Score=51.23 Aligned_cols=45 Identities=22% Similarity=0.329 Sum_probs=39.1
Q ss_pred CeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCce
Q 017914 60 NRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFD 104 (364)
Q Consensus 60 ~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~ 104 (364)
|+|.|+|.|.+|+.+++.|++.|++|++.+|++++...+.+.++.
T Consensus 1 m~Ig~IGlG~MG~~mA~~L~~~g~~v~v~dr~~~~~~~~~~~g~~ 45 (301)
T PRK09599 1 MQLGMIGLGRMGGNMARRLLRGGHEVVGYDRNPEAVEALAEEGAT 45 (301)
T ss_pred CEEEEEcccHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHCCCe
Confidence 579999999999999999999999999999998877766555544
|
|
| >PRK09288 purT phosphoribosylglycinamide formyltransferase 2; Validated | Back alignment and domain information |
|---|
Probab=95.74 E-value=0.042 Score=51.30 Aligned_cols=69 Identities=14% Similarity=0.164 Sum_probs=49.2
Q ss_pred CCCeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCChhhH--Hhhc--cCceeeEEE
Q 017914 58 SPNRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETAL--MILT--TLKNYTHLL 128 (364)
Q Consensus 58 ~~~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~--~~~~--~~d~v~~~~ 128 (364)
..|+|+|+|+|..|+.++..+.+.|++|++++.++...... ..-.++..|..|.+. ..++ ++|.|+...
T Consensus 11 ~~~~ilIiG~g~~~~~~~~a~~~~G~~v~~~~~~~~~~~~~--~ad~~~~~~~~d~~~l~~~~~~~~id~vi~~~ 83 (395)
T PRK09288 11 SATRVMLLGSGELGKEVAIEAQRLGVEVIAVDRYANAPAMQ--VAHRSHVIDMLDGDALRAVIEREKPDYIVPEI 83 (395)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCCCCchHH--hhhheEECCCCCHHHHHHHHHHhCCCEEEEee
Confidence 45799999999999999999999999999999876542221 111356678777653 3333 678777543
|
|
| >TIGR02717 AcCoA-syn-alpha acetyl coenzyme A synthetase (ADP forming), alpha domain | Back alignment and domain information |
|---|
Probab=95.74 E-value=1.2 Score=42.42 Aligned_cols=87 Identities=10% Similarity=0.069 Sum_probs=52.6
Q ss_pred CCCeEEEEc-C---ChhhHHHHHHHHhCCC--EEEEEEeCchhhhhhhhCCceEEEccCChhhHHhhccCceeeEEEEec
Q 017914 58 SPNRMLILG-M---GFVGRIFAEKIKNQGW--VVSGTCTNVMKKKELEQSGFDVHLFNANETALMILTTLKNYTHLLVSI 131 (364)
Q Consensus 58 ~~~~vlVtG-t---G~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~~~~~~~d~v~~~~~~~ 131 (364)
..++|.|+| + |.+|..+++.|.+.|| +|+.+..+.... .++..+ -++. +.-..+|.++.+..
T Consensus 6 ~p~siavvGaS~~~~~~g~~~~~~l~~~gf~g~v~~Vnp~~~~i-----~G~~~~-~sl~----~lp~~~Dlavi~vp-- 73 (447)
T TIGR02717 6 NPKSVAVIGASRDPGKVGYAIMKNLIEGGYKGKIYPVNPKAGEI-----LGVKAY-PSVL----EIPDPVDLAVIVVP-- 73 (447)
T ss_pred CCCEEEEEccCCCCCchHHHHHHHHHhCCCCCcEEEECCCCCcc-----CCcccc-CCHH----HCCCCCCEEEEecC--
Confidence 457899999 5 7899999999999998 677666543221 222211 1111 12234566655442
Q ss_pred CCCCCCCChhhhHHHHHHHHhhcCCccEEEEEccc
Q 017914 132 PPLEGTGDPMLKHGELLRSTLMNGHLQWLGYLSST 166 (364)
Q Consensus 132 ~~~~~~~~~~~~~~~~l~~a~~~~~~~r~v~~Ss~ 166 (364)
. .....+++.|.+.|++.+|.+|+.
T Consensus 74 ---------~-~~~~~~l~e~~~~gv~~~vi~s~g 98 (447)
T TIGR02717 74 ---------A-KYVPQVVEECGEKGVKGAVVITAG 98 (447)
T ss_pred ---------H-HHHHHHHHHHHhcCCCEEEEECCC
Confidence 1 223344555666789988887763
|
Although technically reversible, it is believed that this group of ADP-dependent acetyl-CoA synthetases (ACS) act in the direction of acetate and ATP production in the organisms in which it has been characterized. In most species this protein exists as a fused alpha-beta domain polypeptide. In Pyrococcus and related species, however the domains exist as separate polypeptides. This model represents the alpha (N-terminal) domain. In Pyrococcus and related species there appears to have been the development of a paralogous family such that four other proteins are close relatives. In reference, one of these (along with its beta-domain partner) was characterized as ACS-II showing specificity for phenylacetyl-CoA. This model has been constructed to exclude these non-ACS-I paralogs. This may result in new, authentic ACS-I sequences falling below the trusted cutoff. |
| >PRK15116 sulfur acceptor protein CsdL; Provisional | Back alignment and domain information |
|---|
Probab=95.73 E-value=0.1 Score=45.50 Aligned_cols=36 Identities=19% Similarity=0.265 Sum_probs=30.5
Q ss_pred CCCCCeEEEEcCChhhHHHHHHHHhCC-CEEEEEEeC
Q 017914 56 WQSPNRMLILGMGFVGRIFAEKIKNQG-WVVSGTCTN 91 (364)
Q Consensus 56 ~~~~~~vlVtGtG~iG~~l~~~L~~~g-~~V~~~~r~ 91 (364)
.....+|+|+|.|.+|+++++.|.+.| -++++++.+
T Consensus 27 kL~~s~VlVvG~GGVGs~vae~Lar~GVg~itLiD~D 63 (268)
T PRK15116 27 LFADAHICVVGIGGVGSWAAEALARTGIGAITLIDMD 63 (268)
T ss_pred HhcCCCEEEECcCHHHHHHHHHHHHcCCCEEEEEeCC
Confidence 445679999999999999999999999 577777754
|
|
| >TIGR00978 asd_EA aspartate-semialdehyde dehydrogenase (non-peptidoglycan organisms) | Back alignment and domain information |
|---|
Probab=95.73 E-value=0.039 Score=50.32 Aligned_cols=33 Identities=21% Similarity=0.468 Sum_probs=27.8
Q ss_pred CeEEEEc-CChhhHHHHHHHHhCC-CEEEEEEeCc
Q 017914 60 NRMLILG-MGFVGRIFAEKIKNQG-WVVSGTCTNV 92 (364)
Q Consensus 60 ~~vlVtG-tG~iG~~l~~~L~~~g-~~V~~~~r~~ 92 (364)
++|.|+| +|++|++|++.|.+++ .++..+..+.
T Consensus 1 ~kVaIvGatG~~G~~L~~~l~~~~~~~l~~v~~~~ 35 (341)
T TIGR00978 1 MRVAVLGATGLVGQKFVKLLAKHPYFELAKVVASP 35 (341)
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCceEEEEEECh
Confidence 5899999 9999999999998876 6888885543
|
Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. Separate models are built for the two types in order to exclude the USG-1 protein, found in several species, which is specifically related to the Bacillus subtilis type of aspartate-semialdehyde dehydrogenase. Members of this type are found primarily in organisms that lack peptidoglycan. |
| >COG2130 Putative NADP-dependent oxidoreductases [General function prediction only] | Back alignment and domain information |
|---|
Probab=95.72 E-value=0.079 Score=46.27 Aligned_cols=101 Identities=16% Similarity=0.156 Sum_probs=66.1
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhh-CCceEEEccCChhhH-Hhh-----ccCceeeEEE
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQ-SGFDVHLFNANETAL-MIL-----TTLKNYTHLL 128 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~-~~~~~~~~D~~~~~~-~~~-----~~~d~v~~~~ 128 (364)
..+.+|+|.| +|.+|+-+.+-..-+|++|+++.-++++...+.+ .+.. ...|..+.++ ..+ +++|+.+.++
T Consensus 149 k~GetvvVSaAaGaVGsvvgQiAKlkG~rVVGiaGg~eK~~~l~~~lGfD-~~idyk~~d~~~~L~~a~P~GIDvyfeNV 227 (340)
T COG2130 149 KAGETVVVSAAAGAVGSVVGQIAKLKGCRVVGIAGGAEKCDFLTEELGFD-AGIDYKAEDFAQALKEACPKGIDVYFENV 227 (340)
T ss_pred CCCCEEEEEecccccchHHHHHHHhhCCeEEEecCCHHHHHHHHHhcCCc-eeeecCcccHHHHHHHHCCCCeEEEEEcC
Confidence 3467899999 9999998887777789999999999999887765 3333 2345555554 233 4455555544
Q ss_pred EecCCCCCCCChhhhHHHHHHHHhhcCCccEEEEEccceeecCC
Q 017914 129 VSIPPLEGTGDPMLKHGELLRSTLMNGHLQWLGYLSSTGVYGHS 172 (364)
Q Consensus 129 ~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~r~v~~Ss~~vy~~~ 172 (364)
+. . ....++..++.. .|++.++-++-|+..
T Consensus 228 Gg---------~---v~DAv~~~ln~~--aRi~~CG~IS~YN~~ 257 (340)
T COG2130 228 GG---------E---VLDAVLPLLNLF--ARIPVCGAISQYNAP 257 (340)
T ss_pred Cc---------h---HHHHHHHhhccc--cceeeeeehhhcCCC
Confidence 31 1 122233333332 389988888878654
|
|
| >cd01488 Uba3_RUB Ubiquitin activating enzyme (E1) subunit UBA3 | Back alignment and domain information |
|---|
Probab=95.71 E-value=0.079 Score=46.82 Aligned_cols=30 Identities=17% Similarity=0.351 Sum_probs=25.5
Q ss_pred eEEEEcCChhhHHHHHHHHhCCC-EEEEEEe
Q 017914 61 RMLILGMGFVGRIFAEKIKNQGW-VVSGTCT 90 (364)
Q Consensus 61 ~vlVtGtG~iG~~l~~~L~~~g~-~V~~~~r 90 (364)
+|||+|.|.+|..+++.|...|. ++++++.
T Consensus 1 kVlVVGaGGlG~eilknLal~Gvg~I~IvD~ 31 (291)
T cd01488 1 KILVIGAGGLGCELLKNLALSGFRNIHVIDM 31 (291)
T ss_pred CEEEECCCHHHHHHHHHHHHcCCCeEEEECC
Confidence 58999999999999999999985 5665554
|
UBA3 is part of the heterodimeric activating enzyme (E1), specific for the Rub family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins. consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin(-like) by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by Rub family of ubiquitin-like proteins (Ublps) activates SCF ubiquitin ligases and is involved in cell cycle control, signaling and embryogenesis. UBA3 contains both the nucleotide-binding motif involved in adenylation and the catalytic cysteine involved in the thioester intermediate and Ublp transfer to E2. |
| >cd01491 Ube1_repeat1 Ubiquitin activating enzyme (E1), repeat 1 | Back alignment and domain information |
|---|
Probab=95.70 E-value=0.11 Score=45.78 Aligned_cols=101 Identities=15% Similarity=0.061 Sum_probs=62.0
Q ss_pred CCCCCeEEEEcCChhhHHHHHHHHhCCC-EEEEEEeCchhhhh-----------------------hhh--CCc--eEEE
Q 017914 56 WQSPNRMLILGMGFVGRIFAEKIKNQGW-VVSGTCTNVMKKKE-----------------------LEQ--SGF--DVHL 107 (364)
Q Consensus 56 ~~~~~~vlVtGtG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~-----------------------l~~--~~~--~~~~ 107 (364)
.....+|||+|.|.+|..+++.|...|. ++++.+...-.... +.+ +.+ +.+.
T Consensus 16 kL~~s~VLIvG~gGLG~EiaKnLalaGVg~itI~D~d~ve~snL~rqf~~~~~dIGk~Kaea~~~~L~eLNp~V~V~~~~ 95 (286)
T cd01491 16 KLQKSNVLISGLGGLGVEIAKNLILAGVKSVTLHDTKPCSWSDLSSQFYLREEDIGKNRAEASQARLAELNPYVPVTVST 95 (286)
T ss_pred HHhcCcEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCccchhhcccCccCChHHhCHHHHHHHHHHHHHHCCCCEEEEEe
Confidence 3455799999999999999999999995 56666643211111 111 222 2333
Q ss_pred ccCChhhHHhhccCceeeEEEEecCCCCCCCChhhhHHHHHHHHhhcCCccEEEEEccceeecC
Q 017914 108 FNANETALMILTTLKNYTHLLVSIPPLEGTGDPMLKHGELLRSTLMNGHLQWLGYLSSTGVYGH 171 (364)
Q Consensus 108 ~D~~~~~~~~~~~~d~v~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~r~v~~Ss~~vy~~ 171 (364)
.+++. ..+..+|.|+.+.. .......+-++|++.++ .||...+.+.+|.
T Consensus 96 ~~~~~---~~l~~fdvVV~~~~-----------~~~~~~~in~~c~~~~i-pfI~a~~~G~~G~ 144 (286)
T cd01491 96 GPLTT---DELLKFQVVVLTDA-----------SLEDQLKINEFCHSPGI-KFISADTRGLFGS 144 (286)
T ss_pred ccCCH---HHHhcCCEEEEecC-----------CHHHHHHHHHHHHHcCC-EEEEEeccccEEE
Confidence 33221 45677787666531 11233456677777775 5888888777763
|
E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Ubiquitin-E1 is a single-chain protein with a weakly conserved two-fold repeat. This CD represents the first repeat of Ub-E1. |
| >COG1255 Uncharacterized protein conserved in archaea [Function unknown] | Back alignment and domain information |
|---|
Probab=95.69 E-value=0.14 Score=37.65 Aligned_cols=86 Identities=13% Similarity=0.130 Sum_probs=65.4
Q ss_pred CeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCChhhHHhhccCceeeEEEEecCCCCCCCC
Q 017914 60 NRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETALMILTTLKNYTHLLVSIPPLEGTGD 139 (364)
Q Consensus 60 ~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~~~~~~~d~v~~~~~~~~~~~~~~~ 139 (364)
.+|+=+|-||- ..++++|.++|++|++.+-++.... .++.++.-|+++|+....++.|.|+.+=
T Consensus 15 gkVvEVGiG~~-~~VA~~L~e~g~dv~atDI~~~~a~----~g~~~v~DDitnP~~~iY~~A~lIYSiR----------- 78 (129)
T COG1255 15 GKVVEVGIGFF-LDVAKRLAERGFDVLATDINEKTAP----EGLRFVVDDITNPNISIYEGADLIYSIR----------- 78 (129)
T ss_pred CcEEEEccchH-HHHHHHHHHcCCcEEEEecccccCc----ccceEEEccCCCccHHHhhCccceeecC-----------
Confidence 37777797763 5689999999999999999877443 6899999999999988888988887642
Q ss_pred hhhhHHHHHHHHhhcCCccEEE
Q 017914 140 PMLKHGELLRSTLMNGHLQWLG 161 (364)
Q Consensus 140 ~~~~~~~~l~~a~~~~~~~r~v 161 (364)
+-.+.+.-+++.+++-|..-+|
T Consensus 79 pppEl~~~ildva~aVga~l~I 100 (129)
T COG1255 79 PPPELQSAILDVAKAVGAPLYI 100 (129)
T ss_pred CCHHHHHHHHHHHHhhCCCEEE
Confidence 2224456677777766666555
|
|
| >cd08230 glucose_DH Glucose dehydrogenase | Back alignment and domain information |
|---|
Probab=95.67 E-value=0.1 Score=47.99 Aligned_cols=70 Identities=21% Similarity=0.248 Sum_probs=49.2
Q ss_pred CCCeEEEEcCChhhHHHHHHHHhCCCEEEEEEe---CchhhhhhhhCCceEEEccCChhhH-H--hhccCceeeEEEE
Q 017914 58 SPNRMLILGMGFVGRIFAEKIKNQGWVVSGTCT---NVMKKKELEQSGFDVHLFNANETAL-M--ILTTLKNYTHLLV 129 (364)
Q Consensus 58 ~~~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r---~~~~~~~l~~~~~~~~~~D~~~~~~-~--~~~~~d~v~~~~~ 129 (364)
.+.+|||+|+|.+|...++.+...|.+|++++| ++.+.+.+.+.++..+ |..+.+. . ...++|.|+.+++
T Consensus 172 ~g~~vlI~G~G~vG~~a~q~ak~~G~~vi~~~~~~~~~~~~~~~~~~Ga~~v--~~~~~~~~~~~~~~~~d~vid~~g 247 (355)
T cd08230 172 NPRRALVLGAGPIGLLAALLLRLRGFEVYVLNRRDPPDPKADIVEELGATYV--NSSKTPVAEVKLVGEFDLIIEATG 247 (355)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEe--cCCccchhhhhhcCCCCEEEECcC
Confidence 467999999999999999988889999999998 4555555555666653 4333221 1 2245677777664
|
Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai |
| >PRK08655 prephenate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.66 E-value=0.029 Score=52.97 Aligned_cols=64 Identities=22% Similarity=0.291 Sum_probs=44.7
Q ss_pred CeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhh-hhCCceEEEccCChhhHHhhccCceeeEEE
Q 017914 60 NRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKEL-EQSGFDVHLFNANETALMILTTLKNYTHLL 128 (364)
Q Consensus 60 ~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l-~~~~~~~~~~D~~~~~~~~~~~~d~v~~~~ 128 (364)
|+|.|+| +|.+|..+++.|.+.|++|++.+|+++....+ ...++.+ .+.....+..+|.|+.++
T Consensus 1 MkI~IIGG~G~mG~slA~~L~~~G~~V~v~~r~~~~~~~~a~~~gv~~-----~~~~~e~~~~aDvVIlav 66 (437)
T PRK08655 1 MKISIIGGTGGLGKWFARFLKEKGFEVIVTGRDPKKGKEVAKELGVEY-----ANDNIDAAKDADIVIISV 66 (437)
T ss_pred CEEEEEecCCHHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHcCCee-----ccCHHHHhccCCEEEEec
Confidence 5899998 89999999999999999999999987654332 2223321 111114556777777665
|
|
| >PTZ00075 Adenosylhomocysteinase; Provisional | Back alignment and domain information |
|---|
Probab=95.65 E-value=0.039 Score=51.89 Aligned_cols=67 Identities=16% Similarity=0.189 Sum_probs=48.8
Q ss_pred CCCCCeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCChhhHHhhccCceeeEEE
Q 017914 56 WQSPNRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETALMILTTLKNYTHLL 128 (364)
Q Consensus 56 ~~~~~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~~~~~~~d~v~~~~ 128 (364)
...+++|+|+|.|.||+.+++.|...|.+|++..+++.+.......++.+. + .+ ++++.+|+|+.+.
T Consensus 251 ~LaGKtVgVIG~G~IGr~vA~rL~a~Ga~ViV~e~dp~~a~~A~~~G~~~~--~---le-ell~~ADIVI~at 317 (476)
T PTZ00075 251 MIAGKTVVVCGYGDVGKGCAQALRGFGARVVVTEIDPICALQAAMEGYQVV--T---LE-DVVETADIFVTAT 317 (476)
T ss_pred CcCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCchhHHHHHhcCceec--c---HH-HHHhcCCEEEECC
Confidence 356799999999999999999999999999999887665432222344332 1 12 4677889887653
|
|
| >PRK09260 3-hydroxybutyryl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=95.63 E-value=0.019 Score=51.11 Aligned_cols=39 Identities=15% Similarity=0.263 Sum_probs=35.0
Q ss_pred CeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCchhhhhh
Q 017914 60 NRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMKKKEL 98 (364)
Q Consensus 60 ~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l 98 (364)
++|.|+|+|.+|..++..|.+.|++|++++++++..+.+
T Consensus 2 ~~V~VIG~G~mG~~iA~~la~~G~~V~~~d~~~~~~~~~ 40 (288)
T PRK09260 2 EKLVVVGAGVMGRGIAYVFAVSGFQTTLVDIKQEQLESA 40 (288)
T ss_pred cEEEEECccHHHHHHHHHHHhCCCcEEEEeCCHHHHHHH
Confidence 589999999999999999999999999999988765543
|
|
| >TIGR00936 ahcY adenosylhomocysteinase | Back alignment and domain information |
|---|
Probab=95.62 E-value=0.032 Score=51.66 Aligned_cols=65 Identities=17% Similarity=0.213 Sum_probs=48.5
Q ss_pred CCCCeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCChhhHHhhccCceeeEE
Q 017914 57 QSPNRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETALMILTTLKNYTHL 127 (364)
Q Consensus 57 ~~~~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~~~~~~~d~v~~~ 127 (364)
..+++|+|+|.|.||+.+++.+...|.+|++.++++.+.......+..+. ++ + +.+...|+|+.+
T Consensus 193 l~Gk~VvViG~G~IG~~vA~~ak~~Ga~ViV~d~dp~r~~~A~~~G~~v~--~l---e-eal~~aDVVIta 257 (406)
T TIGR00936 193 IAGKTVVVAGYGWCGKGIAMRARGMGARVIVTEVDPIRALEAAMDGFRVM--TM---E-EAAKIGDIFITA 257 (406)
T ss_pred CCcCEEEEECCCHHHHHHHHHHhhCcCEEEEEeCChhhHHHHHhcCCEeC--CH---H-HHHhcCCEEEEC
Confidence 46789999999999999999999999999999988766443333454332 22 2 356678887654
|
This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704). |
| >cd08293 PTGR2 Prostaglandin reductase | Back alignment and domain information |
|---|
Probab=95.61 E-value=0.08 Score=48.33 Aligned_cols=92 Identities=18% Similarity=0.221 Sum_probs=58.8
Q ss_pred CeEEEEc-CChhhHHHHHHHHhCCC-EEEEEEeCchhhhhhhh-CCceEEEccCChhhH----Hhh--ccCceeeEEEEe
Q 017914 60 NRMLILG-MGFVGRIFAEKIKNQGW-VVSGTCTNVMKKKELEQ-SGFDVHLFNANETAL----MIL--TTLKNYTHLLVS 130 (364)
Q Consensus 60 ~~vlVtG-tG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~l~~-~~~~~~~~D~~~~~~----~~~--~~~d~v~~~~~~ 130 (364)
.+|||.| +|.+|..+++.+...|. +|++++++.++.+.+.+ .+++.+ .|..+.++ ..+ .++|.|+.+++.
T Consensus 156 ~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~~~~~~~~~lGa~~v-i~~~~~~~~~~i~~~~~~gvd~vid~~g~ 234 (345)
T cd08293 156 QTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGSDEKCQLLKSELGFDAA-INYKTDNVAERLRELCPEGVDVYFDNVGG 234 (345)
T ss_pred CEEEEECCCcHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhcCCcEE-EECCCCCHHHHHHHHCCCCceEEEECCCc
Confidence 6999999 79999999999999998 89999998877665543 455432 23333222 111 357777765431
Q ss_pred cCCCCCCCChhhhHHHHHHHHhhcCCccEEEEEccc
Q 017914 131 IPPLEGTGDPMLKHGELLRSTLMNGHLQWLGYLSST 166 (364)
Q Consensus 131 ~~~~~~~~~~~~~~~~~l~~a~~~~~~~r~v~~Ss~ 166 (364)
. ........++..| ++|.++..
T Consensus 235 ---------~---~~~~~~~~l~~~G--~iv~~G~~ 256 (345)
T cd08293 235 ---------E---ISDTVISQMNENS--HIILCGQI 256 (345)
T ss_pred ---------H---HHHHHHHHhccCC--EEEEEeee
Confidence 1 1233445555554 78877643
|
Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid |
| >PRK06436 glycerate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.61 E-value=0.049 Score=48.66 Aligned_cols=63 Identities=21% Similarity=0.139 Sum_probs=45.9
Q ss_pred CCCCeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCChhhHHhhccCceeeEEEE
Q 017914 57 QSPNRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETALMILTTLKNYTHLLV 129 (364)
Q Consensus 57 ~~~~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~~~~~~~d~v~~~~~ 129 (364)
..+++|.|+|.|.||+.+++.|...|++|++.+|+... .++.... .+.+ +.+..+|.|+.+..
T Consensus 120 L~gktvgIiG~G~IG~~vA~~l~afG~~V~~~~r~~~~------~~~~~~~---~~l~-ell~~aDiv~~~lp 182 (303)
T PRK06436 120 LYNKSLGILGYGGIGRRVALLAKAFGMNIYAYTRSYVN------DGISSIY---MEPE-DIMKKSDFVLISLP 182 (303)
T ss_pred CCCCEEEEECcCHHHHHHHHHHHHCCCEEEEECCCCcc------cCccccc---CCHH-HHHhhCCEEEECCC
Confidence 46789999999999999999888889999999987432 1221111 1222 56788898887664
|
|
| >PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=95.61 E-value=0.35 Score=46.06 Aligned_cols=119 Identities=15% Similarity=0.125 Sum_probs=71.1
Q ss_pred EEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCChhhH-HhhccCceeeEEEEecCCCCCCCChh
Q 017914 64 ILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETAL-MILTTLKNYTHLLVSIPPLEGTGDPM 141 (364)
Q Consensus 64 VtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~-~~~~~~d~v~~~~~~~~~~~~~~~~~ 141 (364)
|+| +|.+|..+++.|...|.+|+...+...+.......++.-+.+|.+..+. ..+. ..
T Consensus 43 l~~~~~g~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~l~--------------------~~ 102 (450)
T PRK08261 43 LVGGAGRLAEALAALLAGLGYDVVANNDGGLTWAAGWGDRFGALVFDATGITDPADLK--------------------AL 102 (450)
T ss_pred EEccCchhHHHHHHHHhhCCCeeeecCccccccccCcCCcccEEEEECCCCCCHHHHH--------------------HH
Confidence 555 8999999999999999999998765543222222344444445544221 1110 00
Q ss_pred hhHHHHHHHHhhcCCccEEEEEccceeecCCCCccccCCCCCCCCChhHHHHHHHHHHHHHhhhhc--CCcEEEEEecc
Q 017914 142 LKHGELLRSTLMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANPTTELGRLRLSAEKGWLNLGRDL--GISAQVFRLGG 218 (364)
Q Consensus 142 ~~~~~~l~~a~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~ilRp~~ 218 (364)
.......+..+... .|||++++..... ....|+.+|...+.+++.++++. ++.+..+.++.
T Consensus 103 ~~~~~~~l~~l~~~--griv~i~s~~~~~--------------~~~~~~~akaal~gl~rsla~E~~~gi~v~~i~~~~ 165 (450)
T PRK08261 103 YEFFHPVLRSLAPC--GRVVVLGRPPEAA--------------ADPAAAAAQRALEGFTRSLGKELRRGATAQLVYVAP 165 (450)
T ss_pred HHHHHHHHHhccCC--CEEEEEccccccC--------------CchHHHHHHHHHHHHHHHHHHHhhcCCEEEEEecCC
Confidence 01112223333233 4899998754320 11258999999999999887654 56777776654
|
|
| >PLN02494 adenosylhomocysteinase | Back alignment and domain information |
|---|
Probab=95.60 E-value=0.035 Score=52.09 Aligned_cols=64 Identities=19% Similarity=0.178 Sum_probs=47.9
Q ss_pred CCCCeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCChhhHHhhccCceeeE
Q 017914 57 QSPNRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETALMILTTLKNYTH 126 (364)
Q Consensus 57 ~~~~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~~~~~~~d~v~~ 126 (364)
..+++|+|+|.|.||+.+++.+...|.+|++..+++.+.......+..++ ++ + +.+...|+|+.
T Consensus 252 LaGKtVvViGyG~IGr~vA~~aka~Ga~VIV~e~dp~r~~eA~~~G~~vv--~l---e-Eal~~ADVVI~ 315 (477)
T PLN02494 252 IAGKVAVICGYGDVGKGCAAAMKAAGARVIVTEIDPICALQALMEGYQVL--TL---E-DVVSEADIFVT 315 (477)
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCchhhHHHHhcCCeec--cH---H-HHHhhCCEEEE
Confidence 45789999999999999999999999999999998765433333455432 22 2 45677888876
|
|
| >PRK07819 3-hydroxybutyryl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=95.57 E-value=0.024 Score=50.30 Aligned_cols=39 Identities=23% Similarity=0.108 Sum_probs=35.2
Q ss_pred CCeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCchhhhh
Q 017914 59 PNRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMKKKE 97 (364)
Q Consensus 59 ~~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~ 97 (364)
+++|.|+|+|.+|..++..|+..|++|++++++++..+.
T Consensus 5 ~~~V~ViGaG~mG~~iA~~~a~~G~~V~l~d~~~~~~~~ 43 (286)
T PRK07819 5 IQRVGVVGAGQMGAGIAEVCARAGVDVLVFETTEELATA 43 (286)
T ss_pred ccEEEEEcccHHHHHHHHHHHhCCCEEEEEECCHHHHHH
Confidence 358999999999999999999999999999999877544
|
|
| >PRK07530 3-hydroxybutyryl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=95.57 E-value=0.024 Score=50.54 Aligned_cols=39 Identities=15% Similarity=0.148 Sum_probs=34.9
Q ss_pred CCeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCchhhhh
Q 017914 59 PNRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMKKKE 97 (364)
Q Consensus 59 ~~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~ 97 (364)
.++|.|+|+|.+|..++..|+.+|++|++.+|+++..+.
T Consensus 4 ~~kI~vIGaG~mG~~iA~~la~~G~~V~l~d~~~~~~~~ 42 (292)
T PRK07530 4 IKKVGVIGAGQMGNGIAHVCALAGYDVLLNDVSADRLEA 42 (292)
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHH
Confidence 478999999999999999999999999999998776543
|
|
| >cd01337 MDH_glyoxysomal_mitochondrial Glyoxysomal and mitochondrial malate dehydrogenases | Back alignment and domain information |
|---|
Probab=95.56 E-value=0.091 Score=47.06 Aligned_cols=71 Identities=11% Similarity=-0.040 Sum_probs=45.6
Q ss_pred CeEEEEc-CChhhHHHHHHHHhCC--CEEEEEEeCchhhh--hhhhCC--ceEEEccCChhh-HHhhccCceeeEEEEec
Q 017914 60 NRMLILG-MGFVGRIFAEKIKNQG--WVVSGTCTNVMKKK--ELEQSG--FDVHLFNANETA-LMILTTLKNYTHLLVSI 131 (364)
Q Consensus 60 ~~vlVtG-tG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~--~l~~~~--~~~~~~D~~~~~-~~~~~~~d~v~~~~~~~ 131 (364)
|+|.|+| +|.+|+.++-.|..+| .++++++.+..... .+.... ..+.... .+.+ ...++++|.|+..++..
T Consensus 1 ~KI~IIGaaG~VG~~~a~~l~~~~~~~elvLiDi~~a~g~alDL~~~~~~~~i~~~~-~~~~~y~~~~daDivvitaG~~ 79 (310)
T cd01337 1 VKVAVLGAAGGIGQPLSLLLKLNPLVSELALYDIVNTPGVAADLSHINTPAKVTGYL-GPEELKKALKGADVVVIPAGVP 79 (310)
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEecCccceeehHhHhCCCcceEEEec-CCCchHHhcCCCCEEEEeCCCC
Confidence 6899999 5999999999998887 48888888611111 122111 1121110 1112 26789999999988764
|
MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are localized to the glycosome and mitochondria. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=95.54 E-value=0.035 Score=49.07 Aligned_cols=38 Identities=13% Similarity=0.163 Sum_probs=33.7
Q ss_pred CCCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCch
Q 017914 56 WQSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVM 93 (364)
Q Consensus 56 ~~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~ 93 (364)
...+++|.|+| +|.+|+.++..|+++|++|++..|...
T Consensus 156 ~l~Gk~V~vIG~s~ivG~PmA~~L~~~gatVtv~~~~t~ 194 (301)
T PRK14194 156 DLTGKHAVVIGRSNIVGKPMAALLLQAHCSVTVVHSRST 194 (301)
T ss_pred CCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEECCCCC
Confidence 46789999999 789999999999999999999977543
|
|
| >KOG2013 consensus SMT3/SUMO-activating complex, catalytic component UBA2 [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=95.51 E-value=0.021 Score=52.63 Aligned_cols=35 Identities=17% Similarity=0.336 Sum_probs=29.0
Q ss_pred CCCeEEEEcCChhhHHHHHHHHhCCC-EEEEEEeCc
Q 017914 58 SPNRMLILGMGFVGRIFAEKIKNQGW-VVSGTCTNV 92 (364)
Q Consensus 58 ~~~~vlVtGtG~iG~~l~~~L~~~g~-~V~~~~r~~ 92 (364)
.+-+|||+|+|.||..|.+.|+..|+ +|++++-..
T Consensus 11 ~~~riLvVGaGGIGCELLKnLal~gf~~IhiIDlDT 46 (603)
T KOG2013|consen 11 KSGRILVVGAGGIGCELLKNLALTGFEEIHIIDLDT 46 (603)
T ss_pred ccCeEEEEecCcccHHHHHHHHHhcCCeeEEEeccc
Confidence 34689999999999999999999996 577766543
|
|
| >PRK13302 putative L-aspartate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.50 E-value=0.16 Score=44.69 Aligned_cols=68 Identities=13% Similarity=0.158 Sum_probs=43.5
Q ss_pred CCCeEEEEcCChhhHHHHHHHHhC--CCEEEE-EEeCchhhhhhhh-CCceEEEccCChhhHHhhccCceeeEEEE
Q 017914 58 SPNRMLILGMGFVGRIFAEKIKNQ--GWVVSG-TCTNVMKKKELEQ-SGFDVHLFNANETALMILTTLKNYTHLLV 129 (364)
Q Consensus 58 ~~~~vlVtGtG~iG~~l~~~L~~~--g~~V~~-~~r~~~~~~~l~~-~~~~~~~~D~~~~~~~~~~~~d~v~~~~~ 129 (364)
.+++|-|+|.|.||+.+++.|.+. ++++.+ .+|++++...+.. .+..... .+.+ +.+.++|.|+-++.
T Consensus 5 ~~irIGIIG~G~IG~~~a~~L~~~~~~~el~aV~dr~~~~a~~~a~~~g~~~~~---~~~e-ell~~~D~Vvi~tp 76 (271)
T PRK13302 5 PELRVAIAGLGAIGKAIAQALDRGLPGLTLSAVAVRDPQRHADFIWGLRRPPPV---VPLD-QLATHADIVVEAAP 76 (271)
T ss_pred CeeEEEEECccHHHHHHHHHHHhcCCCeEEEEEECCCHHHHHHHHHhcCCCccc---CCHH-HHhcCCCEEEECCC
Confidence 457999999999999999999873 788875 4666655444321 1211111 2222 34567888887763
|
|
| >cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR) | Back alignment and domain information |
|---|
Probab=95.47 E-value=0.16 Score=45.54 Aligned_cols=46 Identities=22% Similarity=0.260 Sum_probs=38.5
Q ss_pred CCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCc
Q 017914 58 SPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGF 103 (364)
Q Consensus 58 ~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~ 103 (364)
.+++|+|+| +|.+|..+++.+...|.+|++++++.++.+.+...++
T Consensus 144 ~g~~vlI~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~ 190 (325)
T cd08253 144 AGETVLVHGGSGAVGHAAVQLARWAGARVIATASSAEGAELVRQAGA 190 (325)
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCC
Confidence 457999999 8999999999999999999999998777666554454
|
Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts |
| >PRK05678 succinyl-CoA synthetase subunit alpha; Validated | Back alignment and domain information |
|---|
Probab=95.47 E-value=1.7 Score=38.62 Aligned_cols=89 Identities=10% Similarity=0.116 Sum_probs=51.2
Q ss_pred CCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCChhhHHhhcc--CceeeEEEEecCCC
Q 017914 58 SPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETALMILTT--LKNYTHLLVSIPPL 134 (364)
Q Consensus 58 ~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~~~~~~--~d~v~~~~~~~~~~ 134 (364)
...+|+|-| ||.+|+.+.+.|++.|++++..+......+.+ .++..+ -++. ++... +|.++.++.
T Consensus 7 ~~~~~~v~~~~~~~g~~~l~~l~~~g~~~v~pVnp~~~~~~v--~G~~~y-~sv~----dlp~~~~~DlAvi~vp----- 74 (291)
T PRK05678 7 KDTKVIVQGITGKQGTFHTEQMLAYGTNIVGGVTPGKGGTTV--LGLPVF-NTVA----EAVEATGANASVIYVP----- 74 (291)
T ss_pred CCCeEEEeCCCchHHHHHHHHHHHCCCCEEEEECCCCCCCeE--eCeecc-CCHH----HHhhccCCCEEEEEcC-----
Confidence 456899999 99999999999999888644333322101111 122221 1222 22233 676666552
Q ss_pred CCCCChhhhHHHHHHHHhhcCCccEEEEEcc
Q 017914 135 EGTGDPMLKHGELLRSTLMNGHLQWLGYLSS 165 (364)
Q Consensus 135 ~~~~~~~~~~~~~l~~a~~~~~~~r~v~~Ss 165 (364)
. .....+++.|.+.|++.+|.+|+
T Consensus 75 ------~-~~v~~~l~e~~~~gvk~avI~s~ 98 (291)
T PRK05678 75 ------P-PFAADAILEAIDAGIDLIVCITE 98 (291)
T ss_pred ------H-HHHHHHHHHHHHCCCCEEEEECC
Confidence 1 22334445556688998887776
|
|
| >COG0240 GpsA Glycerol-3-phosphate dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=95.46 E-value=0.043 Score=48.86 Aligned_cols=69 Identities=13% Similarity=0.057 Sum_probs=50.7
Q ss_pred CCeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhC--CceEEEccCChhh-------H-HhhccCceeeEEE
Q 017914 59 PNRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQS--GFDVHLFNANETA-------L-MILTTLKNYTHLL 128 (364)
Q Consensus 59 ~~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~--~~~~~~~D~~~~~-------~-~~~~~~d~v~~~~ 128 (364)
+++|.|+|+|.-|.+|+..|.++||+|+...|+++-...+... +.+++. ++.-++ . .+++++|.|+..+
T Consensus 1 ~~kI~ViGaGswGTALA~~la~ng~~V~lw~r~~~~~~~i~~~~~N~~yLp-~i~lp~~l~at~Dl~~a~~~ad~iv~av 79 (329)
T COG0240 1 MMKIAVIGAGSWGTALAKVLARNGHEVRLWGRDEEIVAEINETRENPKYLP-GILLPPNLKATTDLAEALDGADIIVIAV 79 (329)
T ss_pred CceEEEEcCChHHHHHHHHHHhcCCeeEEEecCHHHHHHHHhcCcCccccC-CccCCcccccccCHHHHHhcCCEEEEEC
Confidence 4789999999999999999999999999999998776666542 333433 333222 2 5566778777665
|
|
| >PRK14620 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.44 E-value=0.025 Score=51.29 Aligned_cols=40 Identities=20% Similarity=0.196 Sum_probs=35.0
Q ss_pred CeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCchhhhhhh
Q 017914 60 NRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELE 99 (364)
Q Consensus 60 ~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~ 99 (364)
|+|.|+|+|.+|..++..|.+.|++|.+++|+.+..+.+.
T Consensus 1 MkI~IiGaGa~G~ala~~L~~~g~~V~l~~r~~~~~~~i~ 40 (326)
T PRK14620 1 MKISILGAGSFGTAIAIALSSKKISVNLWGRNHTTFESIN 40 (326)
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCeEEEEecCHHHHHHHH
Confidence 5799999999999999999999999999999876555444
|
|
| >PRK15059 tartronate semialdehyde reductase; Provisional | Back alignment and domain information |
|---|
Probab=95.44 E-value=0.053 Score=48.33 Aligned_cols=63 Identities=14% Similarity=0.174 Sum_probs=45.4
Q ss_pred CeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCChhhHHhhccCceeeEEE
Q 017914 60 NRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETALMILTTLKNYTHLL 128 (364)
Q Consensus 60 ~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~~~~~~~d~v~~~~ 128 (364)
|+|.++|.|.+|..+++.|++.|++|++.+|++. .+.+...++... .++. +..+.+|.|+-+.
T Consensus 1 m~Ig~IGlG~MG~~ma~~L~~~G~~v~v~~~~~~-~~~~~~~g~~~~----~s~~-~~~~~advVi~~v 63 (292)
T PRK15059 1 MKLGFIGLGIMGTPMAINLARAGHQLHVTTIGPV-ADELLSLGAVSV----ETAR-QVTEASDIIFIMV 63 (292)
T ss_pred CeEEEEccCHHHHHHHHHHHHCCCeEEEEeCCHh-HHHHHHcCCeec----CCHH-HHHhcCCEEEEeC
Confidence 4799999999999999999999999999998764 333433343221 1122 4557788888766
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 364 | ||||
| 3ius_A | 286 | The Structure Of A Functionally Unknown Conserved P | 1e-43 | ||
| 3gpi_A | 286 | Structure Of Putative Nad-Dependent EpimeraseDEHYDR | 5e-13 |
| >pdb|3IUS|A Chain A, The Structure Of A Functionally Unknown Conserved Protein From Silicibacter Pomeroyi Dss Length = 286 | Back alignment and structure |
|
| >pdb|3GPI|A Chain A, Structure Of Putative Nad-Dependent EpimeraseDEHYDRATASE From Methylobacillus Flagellatus Length = 286 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3} Length = 286 | Back alignment and structure |
|---|
Score = 254 bits (649), Expect = 3e-83
Identities = 108/299 (36%), Positives = 155/299 (51%), Gaps = 20/299 (6%)
Query: 60 NRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETALMILT 119
+L G G+ R+ + + QGW + GT N + + + SG + L+ E +L
Sbjct: 6 GTLLSFGHGYTARVLSRALAPQGWRIIGTSRNPDQMEAIRASGAEPLLWPGEEPSL---- 61
Query: 120 TLKNYTHLLVSIPPLEGTGDPMLKHGELLRSTLMNGHLQWLGYLSSTGVYGHSGGAWVDE 179
THLL+S P G GDP+L + +W+GYLS+T VYG GAWVDE
Sbjct: 62 --DGVTHLLISTAPDSG-GDPVLAALGDQIAARAAQ-FRWVGYLSTTAVYGDHDGAWVDE 117
Query: 180 DYPANPTTELGRLRLSAEKGWLNLGRDLGISAQVFRLGGIYGPGRSSVDTIIKQLPLSEG 239
P PT GR R+ AE+ W + + VFRL GIYGPGR +L
Sbjct: 118 TTPLTPTAARGRWRVMAEQQWQAVP---NLPLHVFRLAGIYGPGRG----PFSKLGKGGI 170
Query: 240 QKMRRARQYTSRIHVDDICQVLSASIDKPSAWNVYNVVDDDPAPREEVFAYAWDLVEKKW 299
+++ + Q SRIHV+DI QVL+AS+ +P VYNV DD+P P ++V AYA +L
Sbjct: 171 RRIIKPGQVFSRIHVEDIAQVLAASMARPDPGAVYNVCDDEPVPPQDVIAYAAELQGLPL 230
Query: 300 PGLLKHRKPRENTESSNEKGSSRGE-KRVSNVRMKKELGVRLWHPSYKSGLQSIINQMD 357
P + + + S E KRV N R+K+ELGVRL +P+Y+ GL+++ +
Sbjct: 231 P----PAVDFDKADLTPMARSFYSENKRVRNDRIKEELGVRLKYPNYRVGLEALQADAE 285
|
| >3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT} Length = 286 | Back alignment and structure |
|---|
Score = 236 bits (604), Expect = 2e-76
Identities = 68/309 (22%), Positives = 118/309 (38%), Gaps = 37/309 (11%)
Query: 60 NRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETALMILT 119
+++LI G G +G A ++ QG V+G + + +G + + +
Sbjct: 4 SKILIAGCGDLGLELARRLTAQGHEVTGLRRS----AQPMPAGVQTLIADVTRPDTLASI 59
Query: 120 TLKNYTHLLVSIPPLEGTGDPMLKHG----ELLRSTLMNGHLQWLGYLSSTGVYGHSGGA 175
L+ + E + + S L LQ + ++SSTGVYG
Sbjct: 60 VHLRPEILVYCVAASEYSDEHYRLSYVEGLRNTLSALEGAPLQHVFFVSSTGVYGQEVEE 119
Query: 176 WVDEDYPANPTTELGRLRLSAEKGWLNLGRDLGISAQVFRLGGIYGPGRSSVDTIIKQLP 235
W+DED P G+ L AE + + R GIYGPGR +
Sbjct: 120 WLDEDTPPIAKDFSGKRMLEAEALLAAYS------STILRFSGIYGPGRLRMIRQ----- 168
Query: 236 LSEGQKMRRARQYTSRIHVDDICQVLSASIDKPSAWN---VYNVVDDDPAPREEVFAYAW 292
++ +T+RIH DD ++ I + S +Y V D+ P P ++ +
Sbjct: 169 AQTPEQWPARNAWTNRIHRDDGAAFIAYLIQQRSHAVPERLYIVTDNQPLPVHDLLRWLA 228
Query: 293 DLVEKKWPGLLKHRKPRENTESSNEKGSSRGEKRVSNVRMKKELGVRLWHPSYKSGLQSI 352
D +P + +G K++SN R+ G +L +P Y SG ++
Sbjct: 229 DRQGIAYP--------------AGATPPVQGNKKLSNARL-LASGYQLIYPDYVSGYGAL 273
Query: 353 INQMDQPYQ 361
+ M + +
Sbjct: 274 LAAMREGHH 282
|
| >2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa} Length = 342 | Back alignment and structure |
|---|
Score = 50.4 bits (121), Expect = 4e-07
Identities = 20/207 (9%), Positives = 57/207 (27%), Gaps = 35/207 (16%)
Query: 162 YLSSTGVYGHS-GGAWVDEDYPANPTTEL----GRLRLSAEKGWLNLGRDLGISAQVFRL 216
Y+ S G E + + + ++ R+ G+ +
Sbjct: 123 YVGSAYAMPRHPQGLPGHEGLFYDSLPSGKSSYVLCKWALDEQAREQARN-GLPVVIGIP 181
Query: 217 GGIYGPG--RSSVDTIIKQLPLSEGQKMRRARQYTSRIHVDDICQVLSASIDKPSAWNVY 274
G + G + +I + G+ + I + + L ++++ Y
Sbjct: 182 GMVLGELDIGPTTGRVITAI--GNGEMTHYVAGQRNVIDAAEAGRGLLMALERGRIGERY 239
Query: 275 NVVDDDPAPREEVFAYAWDLVEKKWP------------------GLLKHRKPRENTESSN 316
+ ++ +L+ + P + + P + +
Sbjct: 240 LLT-GHNLEMADLTRRIAELLGQPAPQPMSMAMARALATLGRLRYRVSGQLPLLDETAIE 298
Query: 317 EKGSSRGEKRVSNVRMKKELGVRLWHP 343
G + + + ++ELG +
Sbjct: 299 ---VMAGGQFLDGRKAREELG---FFS 319
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 46.4 bits (109), Expect = 1e-05
Identities = 49/342 (14%), Positives = 93/342 (27%), Gaps = 113/342 (33%)
Query: 52 EKSEWQSPNRMLILGMGFVGRIFAEKIKNQGWV--VSGTCTNVMKKKELEQSGFDVHLF- 108
E E Q + ++ +F + + V +++ K+E++ H+
Sbjct: 10 ETGEHQYQYKDILS-------VFEDAFVDNFDCKDVQDMPKSILSKEEID------HIIM 56
Query: 109 --NANETALMILTTL-----------------KNYTHLLVSI------P----------- 132
+A L + TL NY L+ I P
Sbjct: 57 SKDAVSGTLRLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQR 116
Query: 133 -PLEGTGDPMLKH----GEL---LRSTLMNGHLQWLGYLSSTGVYGHSG-GAWVDEDYPA 183
L K+ + LR L+ L+ + + G G G A
Sbjct: 117 DRLYNDNQVFAKYNVSRLQPYLKLRQALLE--LRPAKNV---LIDGVLGSGKTW----VA 167
Query: 184 NPTTELGRLRLSAEKG--WLNLGR---DLGISAQVFRLGGIYGPGRSSVDTIIKQLPLS- 237
+++ + WLNL + + +L P +S + L
Sbjct: 168 LDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRI 227
Query: 238 EGQKMRRARQYTSRIH------VDDI------------CQVL-----SASIDKPSAWNVY 274
+ R S+ + + ++ C++L D SA
Sbjct: 228 HSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTT 287
Query: 275 NVVDDDPA----PRE--EVFAYAWDLVEKKWPGLLKHRKPRE 310
++ D + P E + K+ PRE
Sbjct: 288 HISLDHHSMTLTPDEVKSLLL--------KYLDCRPQDLPRE 321
|
| >3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes} Length = 221 | Back alignment and structure |
|---|
Score = 41.5 bits (97), Expect = 1e-04
Identities = 34/214 (15%), Positives = 68/214 (31%), Gaps = 12/214 (5%)
Query: 68 GFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETALMILTTLKNYTHL 127
G G E+ KN+G V+ V ++ Q+ D+++ + L + + L + +
Sbjct: 10 GRAGSRILEEAKNRGHEVTAI---VRNAGKITQTHKDINILQKDIFDLTL-SDLSDQNVV 65
Query: 128 LVSIPPLEGTGDPMLKHGELLRSTLMNGHLQWLGYLSSTGVYGHSG-GAWVDEDYPANPT 186
+ + + + + L S L L + G + E
Sbjct: 66 VDAYGISPDEAEKHVTSLDHLISVLNGTVSPRLLVVGGAASLQIDEDGNTLLESKGLREA 125
Query: 187 TELGRLRLSAEKGWLNLGRDLGISAQVFRLGGIYGPGRSSVDTIIKQLPLSEGQKMRRAR 246
R A++ S ++ PG + D I + L G
Sbjct: 126 PYYPTARAQAKQLEHLKSHQAEFSWTYISPSAMFEPGERTGDYQIGKDHLLFGSDGN--- 182
Query: 247 QYTSRIHVDDICQVLSASIDKPSAWN-VYNVVDD 279
S I ++D + I++P+ N + V
Sbjct: 183 ---SFISMEDYAIAVLDEIERPNHLNEHFTVAGK 213
|
| >3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron} Length = 227 | Back alignment and structure |
|---|
Score = 41.6 bits (98), Expect = 2e-04
Identities = 29/211 (13%), Positives = 68/211 (32%), Gaps = 14/211 (6%)
Query: 68 GFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETALMILT-TLKNYTH 126
GFVG + N+G+ V+ V ++++ + + A+ ++L + K
Sbjct: 14 GFVGSALLNEALNRGFEVTAV---VRHPEKIKIENEHLKVKKADVSSLDEVCEVCKGADA 70
Query: 127 LLVSIPPLEGTGDPMLKHGELLRSTL--MNGH-LQWLGYLSSTGVYGHSGGAWVDEDYPA 183
++ + P D + ++ + + + + + G + G + D
Sbjct: 71 VISAFNPGWNNPDIYDETIKVYLTIIDGVKKAGVNRFLMVGGAGSLFIAPGLRLM-DSGE 129
Query: 184 NPTTELGRLRLSAEKGWLNLGRDLGISAQVFRLGGIYGPGRSSVDTIIKQLPLSEGQKMR 243
P L ++ E L ++ I F PG + + + +
Sbjct: 130 VPENILPGVKALGEFYLNFLMKEKEIDWVFFSPAADMRPGVRTGRYRLGKDDMIVDIVGN 189
Query: 244 RARQYTSRIHVDDICQVLSASIDKPSAWNVY 274
S I V+D + ++ P
Sbjct: 190 ------SHISVEDYAAAMIDELEHPKHHQER 214
|
| >2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris} Length = 312 | Back alignment and structure |
|---|
Score = 41.1 bits (97), Expect = 3e-04
Identities = 30/211 (14%), Positives = 75/211 (35%), Gaps = 30/211 (14%)
Query: 162 YLSSTGVYGHSGGA-WVDEDYPANPTTELGRLRLSAEKGWLNLGRDL-GISAQVFRLGGI 219
+ SS V+G + + P+T G + + E+ W ++ G+ + R G+
Sbjct: 115 WPSSIAVFGPTTPKENTPQYTIMEPSTVYGISKQAGER-WCEYYHNIYGVDVRSIRYPGL 173
Query: 220 YGP------GRSSVDTIIKQLPLSEGQKMRRARQYTSR--IHVDDI----CQVLSASIDK 267
G + I +++ + T +++DD ++ A ++K
Sbjct: 174 ISWSTPPGGGTTDYAVDIFYKAIADKKYECFLSSETKMPMMYMDDAIDATINIMKAPVEK 233
Query: 268 PSAWNVYNVVDDDPAPREEVFAYAWDLVEKKWPGLLKHRKPRENTESSNEKGSSRGEKRV 327
+ YN+ P E + ++K P +P + + S +
Sbjct: 234 IKIHSSYNLAAMSFTPTEIA-----NEIKKHIPEFTITYEP----DFRQKIADSW-PASI 283
Query: 328 SNVRMKKELGVRLWHPSY--KSGLQSIINQM 356
+ + +++ W ++ +S + +I +
Sbjct: 284 DDSQAREDWD---WKHTFDLESMTKDMIEHL 311
|
| >3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus} Length = 311 | Back alignment and structure |
|---|
Score = 41.0 bits (97), Expect = 4e-04
Identities = 29/208 (13%), Positives = 62/208 (29%), Gaps = 37/208 (17%)
Query: 162 YLSSTGVYGHSGGAWVDEDYPANPTTELGRLRLSAEKGWLNLGRDL-GISAQVFRLGGIY 220
Y S+ Y +E P G +L+ E N+ G+ + R +Y
Sbjct: 106 YASTISAYSDETSLPWNEKELPLPDLMYGVSKLACEH-IGNIYSRKKGLCIKNLRFAHLY 164
Query: 221 GPG---RSSVDTIIKQLPLSEGQKM------RRARQYTSRIHVDDICQVLSASIDKPSAW 271
G ++ +Q G+++ R++ + D + + ++ +
Sbjct: 165 GFNEKNNYMINRFFRQA--FHGEQLTLHANSVAKREFL---YAKDAAKSVIYALKQEKVS 219
Query: 272 NVYNVVDDDPAPREEVFAYAWDLVEKKWPGLLKHRKPRENTESSNEKGSSRGEKRVS--- 328
+N+ D EV + K L + P S
Sbjct: 220 GTFNIGSGDALTNYEVANTINNAFGNKDN--LLVKNPNA-----------NEGIHSSYMD 266
Query: 329 NVRMKKELGVRLWHPSY--KSGLQSIIN 354
+ + K+ L + Y + ++ I
Sbjct: 267 SSKAKELLD---FSTDYNFATAVEEIHL 291
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 364 | |||
| 3m2p_A | 311 | UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J | 100.0 | |
| 3ruf_A | 351 | WBGU; rossmann fold, UDP-hexose 4-epimerase, isome | 100.0 | |
| 3ius_A | 286 | Uncharacterized conserved protein; APC63810, silic | 100.0 | |
| 3gpi_A | 286 | NAD-dependent epimerase/dehydratase; structural ge | 100.0 | |
| 4egb_A | 346 | DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce | 100.0 | |
| 3enk_A | 341 | UDP-glucose 4-epimerase; seattle structural genomi | 100.0 | |
| 4id9_A | 347 | Short-chain dehydrogenase/reductase; putative dehy | 100.0 | |
| 3ko8_A | 312 | NAD-dependent epimerase/dehydratase; isomerase, UD | 100.0 | |
| 3slg_A | 372 | PBGP3 protein; structural genomics, seattle struct | 100.0 | |
| 3ehe_A | 313 | UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, | 100.0 | |
| 2c20_A | 330 | UDP-glucose 4-epimerase; carbohydrate metabolism, | 100.0 | |
| 1sb8_A | 352 | WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN | 100.0 | |
| 3sxp_A | 362 | ADP-L-glycero-D-mannoheptose-6-epimerase; rossman | 100.0 | |
| 2pk3_A | 321 | GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor | 100.0 | |
| 3vps_A | 321 | TUNA, NAD-dependent epimerase/dehydratase; tunicam | 100.0 | |
| 2x4g_A | 342 | Nucleoside-diphosphate-sugar epimerase; isomerase; | 100.0 | |
| 2c5a_A | 379 | GDP-mannose-3', 5'-epimerase; short chain dehydrat | 100.0 | |
| 2q1s_A | 377 | Putative nucleotide sugar epimerase/ dehydratase; | 100.0 | |
| 1r6d_A | 337 | TDP-glucose-4,6-dehydratase; rossmann fold, short- | 100.0 | |
| 1oc2_A | 348 | DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos | 100.0 | |
| 2hun_A | 336 | 336AA long hypothetical DTDP-glucose 4,6-dehydrat; | 100.0 | |
| 1rpn_A | 335 | GDP-mannose 4,6-dehydratase; short-chain dehydroge | 100.0 | |
| 2p5y_A | 311 | UDP-glucose 4-epimerase; TTHA0591, structural geno | 100.0 | |
| 1gy8_A | 397 | UDP-galactose 4-epimerase; oxidoreductase; HET: NA | 100.0 | |
| 1ek6_A | 348 | UDP-galactose 4-epimerase; short-chain dehydrogena | 100.0 | |
| 4b8w_A | 319 | GDP-L-fucose synthase; oxidoreductase; HET: NAP GD | 100.0 | |
| 2bll_A | 345 | Protein YFBG; decarboxylase, short chain dehydroge | 100.0 | |
| 1rkx_A | 357 | CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; | 100.0 | |
| 1e6u_A | 321 | GDP-fucose synthetase; epimerase/reductase, SDR, R | 100.0 | |
| 1orr_A | 347 | CDP-tyvelose-2-epimerase; rossmann fold, short-cha | 100.0 | |
| 4b4o_A | 298 | Epimerase family protein SDR39U1; isomerase; HET: | 100.0 | |
| 2b69_A | 343 | UDP-glucuronate decarboxylase 1; UDP-glucoronic ac | 100.0 | |
| 1kew_A | 361 | RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo | 100.0 | |
| 1udb_A | 338 | Epimerase, UDP-galactose-4-epimerase; isomerase; H | 100.0 | |
| 2yy7_A | 312 | L-threonine dehydrogenase; thermolabIle, flavobact | 100.0 | |
| 2q1w_A | 333 | Putative nucleotide sugar epimerase/ dehydratase; | 100.0 | |
| 1t2a_A | 375 | GDP-mannose 4,6 dehydratase; structural genomics c | 100.0 | |
| 3sc6_A | 287 | DTDP-4-dehydrorhamnose reductase; RFBD, structural | 100.0 | |
| 1eq2_A | 310 | ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin | 100.0 | |
| 1db3_A | 372 | GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya | 100.0 | |
| 2x6t_A | 357 | ADP-L-glycero-D-manno-heptose-6-epimerase; isomera | 100.0 | |
| 2pzm_A | 330 | Putative nucleotide sugar epimerase/ dehydratase; | 100.0 | |
| 1i24_A | 404 | Sulfolipid biosynthesis protein SQD1; SDR, short-c | 100.0 | |
| 1n7h_A | 381 | GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, | 100.0 | |
| 2z1m_A | 345 | GDP-D-mannose dehydratase; short-chain dehydrogena | 100.0 | |
| 2ydy_A | 315 | Methionine adenosyltransferase 2 subunit beta; oxi | 100.0 | |
| 1n2s_A | 299 | DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold | 100.0 | |
| 1vl0_A | 292 | DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s | 100.0 | |
| 3ajr_A | 317 | NDP-sugar epimerase; L-threonine dehydrogenase, L- | 100.0 | |
| 3oh8_A | 516 | Nucleoside-diphosphate sugar epimerase (SULA FAMI; | 100.0 | |
| 1z7e_A | 660 | Protein aRNA; rossmann fold, OB-like fold, hydrola | 100.0 | |
| 1z45_A | 699 | GAL10 bifunctional protein; epimerase, mutarotase, | 100.0 | |
| 1y1p_A | 342 | ARII, aldehyde reductase II; rossmann fold, short | 100.0 | |
| 2c29_D | 337 | Dihydroflavonol 4-reductase; flavonoids, short deh | 100.0 | |
| 2hrz_A | 342 | AGR_C_4963P, nucleoside-diphosphate-sugar epimeras | 100.0 | |
| 2rh8_A | 338 | Anthocyanidin reductase; flavonoids, rossmann fold | 100.0 | |
| 2v6g_A | 364 | Progesterone 5-beta-reductase; tyrosine-dependent | 100.0 | |
| 2p4h_X | 322 | Vestitone reductase; NADPH-dependent reductase, is | 100.0 | |
| 3dhn_A | 227 | NAD-dependent epimerase/dehydratase; reductase, PF | 100.0 | |
| 2jl1_A | 287 | Triphenylmethane reductase; oxidoreductase, biorem | 100.0 | |
| 2ggs_A | 273 | 273AA long hypothetical DTDP-4-dehydrorhamnose red | 100.0 | |
| 2zcu_A | 286 | Uncharacterized oxidoreductase YTFG; alpha-beta sa | 100.0 | |
| 4f6c_A | 427 | AUSA reductase domain protein; thioester reductase | 100.0 | |
| 4f6l_B | 508 | AUSA reductase domain protein; thioester reductase | 100.0 | |
| 4dqv_A | 478 | Probable peptide synthetase NRP (peptide synthase; | 99.97 | |
| 3ay3_A | 267 | NAD-dependent epimerase/dehydratase; glucuronic ac | 99.97 | |
| 3h2s_A | 224 | Putative NADH-flavin reductase; Q03B84, NESG, LCR1 | 99.97 | |
| 3i6i_A | 346 | Putative leucoanthocyanidin reductase 1; rossmann | 99.97 | |
| 2gn4_A | 344 | FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann | 99.97 | |
| 3dqp_A | 219 | Oxidoreductase YLBE; alpha-beta protein., structur | 99.97 | |
| 3ew7_A | 221 | LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend | 99.97 | |
| 3e48_A | 289 | Putative nucleoside-diphosphate-sugar epimerase; a | 99.97 | |
| 3nzo_A | 399 | UDP-N-acetylglucosamine 4,6-dehydratase; structura | 99.96 | |
| 3st7_A | 369 | Capsular polysaccharide synthesis enzyme CAP5F; ro | 99.96 | |
| 3e8x_A | 236 | Putative NAD-dependent epimerase/dehydratase; stru | 99.96 | |
| 2wm3_A | 299 | NMRA-like family domain containing protein 1; unkn | 99.96 | |
| 3rft_A | 267 | Uronate dehydrogenase; apoenzyme, rossmann fold, N | 99.96 | |
| 1xq6_A | 253 | Unknown protein; structural genomics, protein stru | 99.95 | |
| 1hdo_A | 206 | Biliverdin IX beta reductase; foetal metabolism, H | 99.94 | |
| 1qyd_A | 313 | Pinoresinol-lariciresinol reductase; NADPH-depende | 99.94 | |
| 1xgk_A | 352 | Nitrogen metabolite repression regulator NMRA; ros | 99.94 | |
| 2gas_A | 307 | Isoflavone reductase; NADPH-dependent reductase, o | 99.93 | |
| 1qyc_A | 308 | Phenylcoumaran benzylic ether reductase PT1; NADPH | 99.93 | |
| 3c1o_A | 321 | Eugenol synthase; phenylpropene, PIP reductase, sh | 99.93 | |
| 2a35_A | 215 | Hypothetical protein PA4017; alpha-beta-alpha sand | 99.93 | |
| 2r6j_A | 318 | Eugenol synthase 1; phenylpropene, PIP reductase, | 99.93 | |
| 3qvo_A | 236 | NMRA family protein; structural genomics, PSI-biol | 99.92 | |
| 2bka_A | 242 | CC3, TAT-interacting protein TIP30; NADPH, PEG600, | 99.91 | |
| 3r6d_A | 221 | NAD-dependent epimerase/dehydratase; structural ge | 99.9 | |
| 2bgk_A | 278 | Rhizome secoisolariciresinol dehydrogenase; oxidor | 99.89 | |
| 3m1a_A | 281 | Putative dehydrogenase; short, PSI, MCSG, structur | 99.88 | |
| 2dkn_A | 255 | 3-alpha-hydroxysteroid dehydrogenase; oxidoreducta | 99.88 | |
| 1cyd_A | 244 | Carbonyl reductase; short-chain dehydrogenase, oxi | 99.86 | |
| 1fmc_A | 255 | 7 alpha-hydroxysteroid dehydrogenase; short-chain | 99.86 | |
| 4e6p_A | 259 | Probable sorbitol dehydrogenase (L-iditol 2-dehyd; | 99.85 | |
| 3ai3_A | 263 | NADPH-sorbose reductase; rossmann-fold, NADPH-depe | 99.85 | |
| 3d7l_A | 202 | LIN1944 protein; APC89317, structural genomics, PS | 99.85 | |
| 1spx_A | 278 | Short-chain reductase family member (5L265); paral | 99.85 | |
| 1w6u_A | 302 | 2,4-dienoyl-COA reductase, mitochondrial precursor | 99.85 | |
| 2pd6_A | 264 | Estradiol 17-beta-dehydrogenase 8; short-chain deh | 99.85 | |
| 1zk4_A | 251 | R-specific alcohol dehydrogenase; short chain redu | 99.85 | |
| 2yut_A | 207 | Putative short-chain oxidoreductase; alpha and bet | 99.85 | |
| 3awd_A | 260 | GOX2181, putative polyol dehydrogenase; oxidoreduc | 99.84 | |
| 3d3w_A | 244 | L-xylulose reductase; uronate cycle, short-chain d | 99.84 | |
| 3svt_A | 281 | Short-chain type dehydrogenase/reductase; ssgcid, | 99.84 | |
| 2wsb_A | 254 | Galactitol dehydrogenase; oxidoreductase, SDR, ros | 99.84 | |
| 3un1_A | 260 | Probable oxidoreductase; structural genomics, PSI- | 99.84 | |
| 2cfc_A | 250 | 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor | 99.84 | |
| 2pnf_A | 248 | 3-oxoacyl-[acyl-carrier-protein] reductase; short | 99.83 | |
| 1nff_A | 260 | Putative oxidoreductase RV2002; directed evolution | 99.83 | |
| 3ak4_A | 263 | NADH-dependent quinuclidinone reductase; SDR, (R)- | 99.83 | |
| 2zat_A | 260 | Dehydrogenase/reductase SDR family member 4; alpha | 99.82 | |
| 1xq1_A | 266 | Putative tropinone reducatse; structural genomics, | 99.82 | |
| 3afn_B | 258 | Carbonyl reductase; alpha/beta/alpha, rossmann-fol | 99.82 | |
| 2z1n_A | 260 | Dehydrogenase; reductase, SDR, oxidoreductase; 1.8 | 99.82 | |
| 1ja9_A | 274 | 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p | 99.82 | |
| 3s55_A | 281 | Putative short-chain dehydrogenase/reductase; stru | 99.82 | |
| 3pxx_A | 287 | Carveol dehydrogenase; structural genomics, seattl | 99.82 | |
| 1hdc_A | 254 | 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi | 99.82 | |
| 3f9i_A | 249 | 3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto | 99.82 | |
| 3pk0_A | 262 | Short-chain dehydrogenase/reductase SDR; ssgcid, s | 99.82 | |
| 3osu_A | 246 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.82 | |
| 2ag5_A | 246 | DHRS6, dehydrogenase/reductase (SDR family) member | 99.82 | |
| 1uay_A | 242 | Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid | 99.81 | |
| 3tzq_B | 271 | Short-chain type dehydrogenase/reductase; ssgcid, | 99.81 | |
| 2ph3_A | 245 | 3-oxoacyl-[acyl carrier protein] reductase; TTHA04 | 99.81 | |
| 2q2v_A | 255 | Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore | 99.81 | |
| 2d1y_A | 256 | Hypothetical protein TT0321; strucrtural genomics, | 99.81 | |
| 2c07_A | 285 | 3-oxoacyl-(acyl-carrier protein) reductase; oxidor | 99.81 | |
| 2hq1_A | 247 | Glucose/ribitol dehydrogenase; CTH-1438, structura | 99.81 | |
| 3gem_A | 260 | Short chain dehydrogenase; structural genomics, AP | 99.81 | |
| 1gee_A | 261 | Glucose 1-dehydrogenase; short-chain dehydrogenase | 99.81 | |
| 2dtx_A | 264 | Glucose 1-dehydrogenase related protein; rossmann | 99.81 | |
| 3v2h_A | 281 | D-beta-hydroxybutyrate dehydrogenase; structural g | 99.81 | |
| 3lyl_A | 247 | 3-oxoacyl-(acyl-carrier-protein) reductase; alpha | 99.81 | |
| 1iy8_A | 267 | Levodione reductase; oxidoreductase; HET: NAD; 1.6 | 99.8 | |
| 3gaf_A | 256 | 7-alpha-hydroxysteroid dehydrogenase; seattle stru | 99.8 | |
| 3pgx_A | 280 | Carveol dehydrogenase; structural genomics, seattl | 99.8 | |
| 1hxh_A | 253 | 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b | 99.8 | |
| 3imf_A | 257 | Short chain dehydrogenase; structural genomics, in | 99.8 | |
| 4dqx_A | 277 | Probable oxidoreductase protein; structural genomi | 99.8 | |
| 3grp_A | 266 | 3-oxoacyl-(acyl carrierprotein) reductase; structu | 99.8 | |
| 3tpc_A | 257 | Short chain alcohol dehydrogenase-related dehydro; | 99.8 | |
| 3vtz_A | 269 | Glucose 1-dehydrogenase; rossmann fold, oxidoreduc | 99.8 | |
| 2ae2_A | 260 | Protein (tropinone reductase-II); oxidoreductase, | 99.8 | |
| 1o5i_A | 249 | 3-oxoacyl-(acyl carrier protein) reductase; TM1169 | 99.8 | |
| 2ehd_A | 234 | Oxidoreductase, oxidoreductase, short-chain dehydr | 99.8 | |
| 3p19_A | 266 | BFPVVD8, putative blue fluorescent protein; rossma | 99.8 | |
| 2fwm_X | 250 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e | 99.8 | |
| 3i4f_A | 264 | 3-oxoacyl-[acyl-carrier protein] reductase; struct | 99.8 | |
| 3rih_A | 293 | Short chain dehydrogenase or reductase; structural | 99.8 | |
| 1mxh_A | 276 | Pteridine reductase 2; SDR topology, protein-subst | 99.8 | |
| 3n74_A | 261 | 3-ketoacyl-(acyl-carrier-protein) reductase; seatt | 99.8 | |
| 2gdz_A | 267 | NAD+-dependent 15-hydroxyprostaglandin dehydrogen; | 99.8 | |
| 1ae1_A | 273 | Tropinone reductase-I; oxidoreductase, tropane alk | 99.8 | |
| 3qiv_A | 253 | Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR | 99.8 | |
| 4dmm_A | 269 | 3-oxoacyl-[acyl-carrier-protein] reductase; rossma | 99.8 | |
| 2o23_A | 265 | HADH2 protein; HSD17B10, schad, ERAB, type II HADH | 99.79 | |
| 3ftp_A | 270 | 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid | 99.79 | |
| 1edo_A | 244 | Beta-keto acyl carrier protein reductase; nucleoti | 99.79 | |
| 2rhc_B | 277 | Actinorhodin polyketide ketoreductase; oxidoreduct | 99.79 | |
| 1geg_A | 256 | Acetoin reductase; SDR family, oxidoreductase; HET | 99.79 | |
| 2b4q_A | 276 | Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier | 99.79 | |
| 2bd0_A | 244 | Sepiapterin reductase; oxidoreductase; HET: NAP BI | 99.79 | |
| 2ekp_A | 239 | 2-deoxy-D-gluconate 3-dehydrogenase; structural ge | 99.79 | |
| 1xhl_A | 297 | Short-chain dehydrogenase/reductase family member | 99.79 | |
| 1yo6_A | 250 | Putative carbonyl reductase sniffer; tyrosine-depe | 99.79 | |
| 1x1t_A | 260 | D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S | 99.79 | |
| 3gvc_A | 277 | Oxidoreductase, probable short-chain type dehydrog | 99.79 | |
| 2uvd_A | 246 | 3-oxoacyl-(acyl-carrier-protein) reductase; beta-k | 99.79 | |
| 3r1i_A | 276 | Short-chain type dehydrogenase/reductase; structur | 99.79 | |
| 2ew8_A | 249 | (S)-1-phenylethanol dehydrogenase; transferase; 2. | 99.79 | |
| 1h5q_A | 265 | NADP-dependent mannitol dehydrogenase; oxidoreduct | 99.79 | |
| 1sby_A | 254 | Alcohol dehydrogenase; ternary complex, NAD, trifl | 99.79 | |
| 3oid_A | 258 | Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa | 99.79 | |
| 3sx2_A | 278 | Putative 3-ketoacyl-(acyl-carrier-protein) reduct; | 99.79 | |
| 1vl8_A | 267 | Gluconate 5-dehydrogenase; TM0441, structural geno | 99.79 | |
| 1uls_A | 245 | Putative 3-oxoacyl-acyl carrier protein reductase; | 99.79 | |
| 3cxt_A | 291 | Dehydrogenase with different specificities; rossma | 99.79 | |
| 3op4_A | 248 | 3-oxoacyl-[acyl-carrier protein] reductase; 3-keto | 99.79 | |
| 3dii_A | 247 | Short-chain dehydrogenase/reductase SDR; SCOR, ros | 99.79 | |
| 3gk3_A | 269 | Acetoacetyl-COA reductase; acetoacetyl-CO reductas | 99.79 | |
| 3uf0_A | 273 | Short-chain dehydrogenase/reductase SDR; gluconate | 99.78 | |
| 3ucx_A | 264 | Short chain dehydrogenase; ssgcid, seattle structu | 99.78 | |
| 3rd5_A | 291 | Mypaa.01249.C; ssgcid, structural genomics, seattl | 99.78 | |
| 3uxy_A | 266 | Short-chain dehydrogenase/reductase SDR; structura | 99.78 | |
| 1xg5_A | 279 | ARPG836; short chain dehydrogenase, human, SGC, st | 99.78 | |
| 3ijr_A | 291 | Oxidoreductase, short chain dehydrogenase/reducta; | 99.78 | |
| 3ctm_A | 279 | Carbonyl reductase; alcohol dehydrogenase, short-c | 99.78 | |
| 4egf_A | 266 | L-xylulose reductase; structural genomics, ssgcid, | 99.78 | |
| 4eso_A | 255 | Putative oxidoreductase; NADP, structural genomics | 99.78 | |
| 2wyu_A | 261 | Enoyl-[acyl carrier protein] reductase; oxidoreduc | 99.78 | |
| 1uzm_A | 247 | 3-oxoacyl-[acyl-carrier protein] reductase; beta-k | 99.78 | |
| 4iin_A | 271 | 3-ketoacyl-acyl carrier protein reductase (FABG); | 99.78 | |
| 3oec_A | 317 | Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; | 99.78 | |
| 3tox_A | 280 | Short chain dehydrogenase; structural genomics, PS | 99.78 | |
| 3sju_A | 279 | Keto reductase; short-chain dehydrogenase, oxidore | 99.78 | |
| 4e3z_A | 272 | Putative oxidoreductase protein; PSI-biology, stru | 99.78 | |
| 3a28_C | 258 | L-2.3-butanediol dehydrogenase; chiral substrate r | 99.78 | |
| 1yxm_A | 303 | Pecra, peroxisomal trans 2-enoyl COA reductase; pe | 99.78 | |
| 1xkq_A | 280 | Short-chain reductase family member (5D234); parra | 99.78 | |
| 3r3s_A | 294 | Oxidoreductase; structural genomics, csgid, center | 99.77 | |
| 2nm0_A | 253 | Probable 3-oxacyl-(acyl-carrier-protein) reductas; | 99.77 | |
| 4fc7_A | 277 | Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman | 99.77 | |
| 4ibo_A | 271 | Gluconate dehydrogenase; enzyme function initiativ | 99.77 | |
| 4da9_A | 280 | Short-chain dehydrogenase/reductase; structural ge | 99.77 | |
| 1fjh_A | 257 | 3alpha-hydroxysteroid dehydrogenase/carbonyl reduc | 99.77 | |
| 1yb1_A | 272 | 17-beta-hydroxysteroid dehydrogenase type XI; shor | 99.77 | |
| 3uve_A | 286 | Carveol dehydrogenase ((+)-trans-carveol dehydrog; | 99.77 | |
| 1yde_A | 270 | Retinal dehydrogenase/reductase 3; oxidoreductase, | 99.77 | |
| 3v8b_A | 283 | Putative dehydrogenase, possibly 3-oxoacyl-[acyl- | 99.77 | |
| 2p91_A | 285 | Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD | 99.77 | |
| 3qlj_A | 322 | Short chain dehydrogenase; structural genomics, se | 99.77 | |
| 3ppi_A | 281 | 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de | 99.76 | |
| 3ezl_A | 256 | Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA | 99.76 | |
| 3o38_A | 266 | Short chain dehydrogenase; tuberculosis, ortholog | 99.76 | |
| 3t4x_A | 267 | Oxidoreductase, short chain dehydrogenase/reducta; | 99.76 | |
| 3rwb_A | 247 | TPLDH, pyridoxal 4-dehydrogenase; short chain dehy | 99.76 | |
| 3e9n_A | 245 | Putative short-chain dehydrogenase/reductase; stru | 99.76 | |
| 3tl3_A | 257 | Short-chain type dehydrogenase/reductase; ssgcid, | 99.76 | |
| 3t7c_A | 299 | Carveol dehydrogenase; structural genomics, seattl | 99.75 | |
| 1qsg_A | 265 | Enoyl-[acyl-carrier-protein] reductase; enoyl redu | 99.75 | |
| 3f1l_A | 252 | Uncharacterized oxidoreductase YCIK; E. coli, NADP | 99.75 | |
| 3u9l_A | 324 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.75 | |
| 3rkr_A | 262 | Short chain oxidoreductase; rossmann fold; HET: NA | 99.75 | |
| 3tfo_A | 264 | Putative 3-oxoacyl-(acyl-carrier-protein) reducta; | 99.75 | |
| 3ek2_A | 271 | Enoyl-(acyl-carrier-protein) reductase (NADH); ssg | 99.75 | |
| 3edm_A | 259 | Short chain dehydrogenase; structural genomics, ox | 99.75 | |
| 3lf2_A | 265 | Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross | 99.75 | |
| 4e4y_A | 244 | Short chain dehydrogenase family protein; structur | 99.75 | |
| 3orf_A | 251 | Dihydropteridine reductase; alpha-beta-alpha sandw | 99.75 | |
| 4iiu_A | 267 | 3-oxoacyl-[acyl-carrier protein] reductase; struct | 99.75 | |
| 2a4k_A | 263 | 3-oxoacyl-[acyl carrier protein] reductase; reduct | 99.74 | |
| 1sny_A | 267 | Sniffer CG10964-PA; alpha and beta protein, rossma | 99.74 | |
| 1wma_A | 276 | Carbonyl reductase [NADPH] 1; oxidoreductase; HET: | 99.74 | |
| 3nrc_A | 280 | Enoyl-[acyl-carrier-protein] reductase (NADH); ros | 99.74 | |
| 2qhx_A | 328 | Pteridine reductase 1; oxidoreductase, short-chain | 99.74 | |
| 1ooe_A | 236 | Dihydropteridine reductase; structural genomics, P | 99.74 | |
| 2pd4_A | 275 | Enoyl-[acyl-carrier-protein] reductase [NADH]; ant | 99.74 | |
| 3l6e_A | 235 | Oxidoreductase, short-chain dehydrogenase/reducta; | 99.74 | |
| 1g0o_A | 283 | Trihydroxynaphthalene reductase; protein-NADPH-act | 99.74 | |
| 4dyv_A | 272 | Short-chain dehydrogenase/reductase SDR; structura | 99.74 | |
| 1dhr_A | 241 | Dihydropteridine reductase; oxidoreductase(acting | 99.73 | |
| 3k31_A | 296 | Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI | 99.73 | |
| 3tjr_A | 301 | Short chain dehydrogenase; structural genomics, se | 99.73 | |
| 4imr_A | 275 | 3-oxoacyl-(acyl-carrier-protein) reductase; oxidor | 99.73 | |
| 3h7a_A | 252 | Short chain dehydrogenase; oxidoreductase, PSI-2, | 99.73 | |
| 3l77_A | 235 | Short-chain alcohol dehydrogenase; oxidoreductase; | 99.73 | |
| 3oig_A | 266 | Enoyl-[acyl-carrier-protein] reductase [NADH]; fat | 99.73 | |
| 3guy_A | 230 | Short-chain dehydrogenase/reductase SDR; structura | 99.73 | |
| 3tsc_A | 277 | Putative oxidoreductase; structural genomics, seat | 99.73 | |
| 3uce_A | 223 | Dehydrogenase; rossmann fold, oxidoreductase; HET: | 99.73 | |
| 3grk_A | 293 | Enoyl-(acyl-carrier-protein) reductase (NADH); ssg | 99.73 | |
| 2x9g_A | 288 | PTR1, pteridine reductase; short chain dehydrogena | 99.72 | |
| 3v2g_A | 271 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.72 | |
| 3kzv_A | 254 | Uncharacterized oxidoreductase YIR035C; cytoplasmi | 99.72 | |
| 2nwq_A | 272 | Probable short-chain dehydrogenase; oxidoreductase | 99.72 | |
| 1zem_A | 262 | Xylitol dehydrogenase; rossmann fold, dinucleotide | 99.72 | |
| 3ged_A | 247 | Short-chain dehydrogenase/reductase SDR; SCOR, ros | 99.72 | |
| 3rku_A | 287 | Oxidoreductase YMR226C; substrate fingerprint, sho | 99.72 | |
| 3u5t_A | 267 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.71 | |
| 3asu_A | 248 | Short-chain dehydrogenase/reductase SDR; SDR famil | 99.71 | |
| 4dry_A | 281 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.71 | |
| 2jah_A | 247 | Clavulanic acid dehydrogenase; short-chain dehydro | 99.71 | |
| 1e7w_A | 291 | Pteridine reductase; dihydrofolate reductase, shor | 99.71 | |
| 3ioy_A | 319 | Short-chain dehydrogenase/reductase SDR; structura | 99.71 | |
| 4b79_A | 242 | PA4098, probable short-chain dehydrogenase; oxidor | 99.71 | |
| 1zmt_A | 254 | Haloalcohol dehalogenase HHEC; halohydrin dehaloge | 99.71 | |
| 3is3_A | 270 | 17BETA-hydroxysteroid dehydrogenase; short chain d | 99.71 | |
| 3ksu_A | 262 | 3-oxoacyl-acyl carrier protein reductase; structur | 99.7 | |
| 1xu9_A | 286 | Corticosteroid 11-beta-dehydrogenase, isozyme 1; h | 99.7 | |
| 3nyw_A | 250 | Putative oxidoreductase; fatty acid synthesis,3-ox | 99.7 | |
| 3icc_A | 255 | Putative 3-oxoacyl-(acyl carrier protein) reducta; | 99.69 | |
| 3zv4_A | 281 | CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox | 99.69 | |
| 3i1j_A | 247 | Oxidoreductase, short chain dehydrogenase/reducta; | 99.68 | |
| 3gdg_A | 267 | Probable NADP-dependent mannitol dehydrogenase; ro | 99.68 | |
| 3sc4_A | 285 | Short chain dehydrogenase (A0QTM2 homolog); ssgcid | 99.68 | |
| 1zmo_A | 244 | Halohydrin dehalogenase; haloalcohol dehalogenase, | 99.67 | |
| 4fn4_A | 254 | Short chain dehydrogenase; NADH-binding, rossmann | 99.65 | |
| 4fs3_A | 256 | Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; | 99.65 | |
| 2qq5_A | 260 | DHRS1, dehydrogenase/reductase SDR family member 1 | 99.64 | |
| 3e03_A | 274 | Short chain dehydrogenase; structural genomics, PS | 99.64 | |
| 3kvo_A | 346 | Hydroxysteroid dehydrogenase-like protein 2; HSDL2 | 99.64 | |
| 4g81_D | 255 | Putative hexonate dehydrogenase; enzyme function i | 99.64 | |
| 1oaa_A | 259 | Sepiapterin reductase; tetrahydrobiopterin, oxidor | 99.63 | |
| 4gkb_A | 258 | 3-oxoacyl-[acyl-carrier protein] reductase; putati | 99.63 | |
| 2h7i_A | 269 | Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi | 99.62 | |
| 4fgs_A | 273 | Probable dehydrogenase protein; PSI-biology, nysgr | 99.62 | |
| 3o26_A | 311 | Salutaridine reductase; short chain dehydrogenase/ | 99.6 | |
| 3u0b_A | 454 | Oxidoreductase, short chain dehydrogenase/reducta | 99.58 | |
| 4hp8_A | 247 | 2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi | 99.57 | |
| 1y7t_A | 327 | Malate dehydrogenase; NAD-dependent-MDH-NADPH comp | 99.57 | |
| 4h15_A | 261 | Short chain alcohol dehydrogenase-related dehydro; | 99.57 | |
| 2fr1_A | 486 | Erythromycin synthase, eryai; short chain dehydrog | 99.57 | |
| 1jtv_A | 327 | 17 beta-hydroxysteroid dehydrogenase type 1; stero | 99.57 | |
| 2z5l_A | 511 | Tylkr1, tylactone synthase starter module and modu | 99.56 | |
| 1gz6_A | 319 | Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF | 99.55 | |
| 1d7o_A | 297 | Enoyl-[acyl-carrier protein] reductase (NADH) PRE; | 99.5 | |
| 3mje_A | 496 | AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1. | 99.43 | |
| 3oml_A | 613 | GH14720P, peroxisomal multifunctional enzyme type | 99.4 | |
| 3qp9_A | 525 | Type I polyketide synthase pikaii; rossmann fold, | 99.33 | |
| 3lt0_A | 329 | Enoyl-ACP reductase; triclosan, triclosan variant, | 99.32 | |
| 2ptg_A | 319 | Enoyl-acyl carrier reductase; apicomplexa, enoyl ( | 99.31 | |
| 2o2s_A | 315 | Enoyl-acyl carrier reductase; enoyl reductase, tri | 99.31 | |
| 2et6_A | 604 | (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox | 99.17 | |
| 3ic5_A | 118 | Putative saccharopine dehydrogenase; structural ge | 99.17 | |
| 2uv8_A | 1887 | Fatty acid synthase subunit alpha (FAS2); fatty ac | 99.08 | |
| 2et6_A | 604 | (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox | 99.06 | |
| 2uv9_A | 1878 | Fatty acid synthase alpha subunits; fungal, dehydr | 99.04 | |
| 2pff_A | 1688 | Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl | 98.93 | |
| 3slk_A | 795 | Polyketide synthase extender module 2; rossmann fo | 98.9 | |
| 3s8m_A | 422 | Enoyl-ACP reductase; rossmann fold, oxidoreductase | 98.86 | |
| 3zu3_A | 405 | Putative reductase YPO4104/Y4119/YP_4011; oxidored | 98.83 | |
| 3llv_A | 141 | Exopolyphosphatase-related protein; NAD(P)-binding | 98.82 | |
| 2hmt_A | 144 | YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane | 98.77 | |
| 4eue_A | 418 | Putative reductase CA_C0462; TER, biofuel, synthet | 98.74 | |
| 1lss_A | 140 | TRK system potassium uptake protein TRKA homolog; | 98.73 | |
| 2g1u_A | 155 | Hypothetical protein TM1088A; structural genomics, | 98.65 | |
| 1b8p_A | 329 | Protein (malate dehydrogenase); oxidoreductase; 1. | 98.54 | |
| 3fwz_A | 140 | Inner membrane protein YBAL; TRKA-N domain, E.coli | 98.49 | |
| 1id1_A | 153 | Putative potassium channel protein; RCK domain, E. | 98.46 | |
| 3c85_A | 183 | Putative glutathione-regulated potassium-efflux S | 98.43 | |
| 3zen_D | 3089 | Fatty acid synthase; transferase, mycolic acid bio | 98.39 | |
| 2vz8_A | 2512 | Fatty acid synthase; transferase, phosphopantethei | 98.38 | |
| 3l4b_C | 218 | TRKA K+ channel protien TM1088B; potassium channel | 98.36 | |
| 1ff9_A | 450 | Saccharopine reductase; lysine biosynthesis, alpha | 98.35 | |
| 1lu9_A | 287 | Methylene tetrahydromethanopterin dehydrogenase; a | 98.34 | |
| 1smk_A | 326 | Malate dehydrogenase, glyoxysomal; tricarboxylic c | 98.27 | |
| 3abi_A | 365 | Putative uncharacterized protein PH1688; L-lysine | 98.26 | |
| 4ina_A | 405 | Saccharopine dehydrogenase; structural genomics, P | 98.2 | |
| 2axq_A | 467 | Saccharopine dehydrogenase; rossmann fold variant, | 98.12 | |
| 1o6z_A | 303 | MDH, malate dehydrogenase; halophilic, ION-binding | 98.09 | |
| 2aef_A | 234 | Calcium-gated potassium channel MTHK; rossmann fol | 98.07 | |
| 1hye_A | 313 | L-lactate/malate dehydrogenase; nucleotide binding | 98.06 | |
| 3l9w_A | 413 | Glutathione-regulated potassium-efflux system Pro | 98.01 | |
| 1pqw_A | 198 | Polyketide synthase; rossmann fold, dimer, structu | 97.85 | |
| 2gk4_A | 232 | Conserved hypothetical protein; alpha-beta-alpha s | 97.8 | |
| 4g65_A | 461 | TRK system potassium uptake protein TRKA; structur | 97.78 | |
| 2vns_A | 215 | Metalloreductase steap3; metal-binding, transmembr | 97.73 | |
| 1lnq_A | 336 | MTHK channels, potassium channel related protein; | 97.7 | |
| 2z2v_A | 365 | Hypothetical protein PH1688; L-lysine dehydrogenas | 97.69 | |
| 4ggo_A | 401 | Trans-2-enoyl-COA reductase; rossmann fold, oxidor | 97.56 | |
| 1jay_A | 212 | Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossma | 97.53 | |
| 3doj_A | 310 | AT3G25530, dehydrogenase-like protein; gamma-hydro | 97.52 | |
| 3gg2_A | 450 | Sugar dehydrogenase, UDP-glucose/GDP-mannose dehyd | 97.49 | |
| 2ew2_A | 316 | 2-dehydropantoate 2-reductase, putative; alpha-str | 97.48 | |
| 1jw9_B | 249 | Molybdopterin biosynthesis MOEB protein; MOEB: mod | 97.47 | |
| 3g0o_A | 303 | 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine | 97.46 | |
| 1u7z_A | 226 | Coenzyme A biosynthesis bifunctional protein coabc | 97.46 | |
| 1v3u_A | 333 | Leukotriene B4 12- hydroxydehydrogenase/prostaglan | 97.45 | |
| 2eez_A | 369 | Alanine dehydrogenase; TTHA0216, structural genomi | 97.42 | |
| 1qor_A | 327 | Quinone oxidoreductase; HET: NAP; 2.20A {Escherich | 97.39 | |
| 1yb5_A | 351 | Quinone oxidoreductase; medium-chain dehydrogenase | 97.38 | |
| 2hcy_A | 347 | Alcohol dehydrogenase 1; tetramer of asymmetric di | 97.38 | |
| 1mv8_A | 436 | GMD, GDP-mannose 6-dehydrogenase; rossman fold, do | 97.38 | |
| 4ezb_A | 317 | Uncharacterized conserved protein; structural geno | 97.37 | |
| 2h78_A | 302 | Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC601 | 97.36 | |
| 2eih_A | 343 | Alcohol dehydrogenase; zinc ION binding protein, s | 97.34 | |
| 4b7c_A | 336 | Probable oxidoreductase; NADP cofactor, rossmann f | 97.33 | |
| 4dll_A | 320 | 2-hydroxy-3-oxopropionate reductase; structural ge | 97.31 | |
| 3pef_A | 287 | 6-phosphogluconate dehydrogenase, NAD-binding; gam | 97.3 | |
| 1vpd_A | 299 | Tartronate semialdehyde reductase; structural geno | 97.3 | |
| 1wly_A | 333 | CAAR, 2-haloacrylate reductase; NADPH-dependent ox | 97.3 | |
| 3qsg_A | 312 | NAD-binding phosphogluconate dehydrogenase-like P; | 97.27 | |
| 2zb4_A | 357 | Prostaglandin reductase 2; rossmann fold, alternat | 97.26 | |
| 3oj0_A | 144 | Glutr, glutamyl-tRNA reductase; structural genomic | 97.26 | |
| 3tnl_A | 315 | Shikimate dehydrogenase; structural genomics, cent | 97.26 | |
| 3pdu_A | 287 | 3-hydroxyisobutyrate dehydrogenase family protein; | 97.25 | |
| 3c24_A | 286 | Putative oxidoreductase; YP_511008.1, structural g | 97.25 | |
| 4g65_A | 461 | TRK system potassium uptake protein TRKA; structur | 97.24 | |
| 2j8z_A | 354 | Quinone oxidoreductase; medium-chain dehydrogenase | 97.24 | |
| 1dih_A | 273 | Dihydrodipicolinate reductase; oxidoreductase; HET | 97.23 | |
| 3qha_A | 296 | Putative oxidoreductase; seattle structural genomi | 97.23 | |
| 3jyo_A | 283 | Quinate/shikimate dehydrogenase; enzyme-cofactor c | 97.22 | |
| 3cky_A | 301 | 2-hydroxymethyl glutarate dehydrogenase; rossmann | 97.22 | |
| 3ggo_A | 314 | Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-b | 97.22 | |
| 3vtf_A | 444 | UDP-glucose 6-dehydrogenase; two discrete alpha/be | 97.19 | |
| 2c0c_A | 362 | Zinc binding alcohol dehydrogenase, domain contain | 97.19 | |
| 1bg6_A | 359 | N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L | 97.19 | |
| 3l6d_A | 306 | Putative oxidoreductase; structural genomics, prot | 97.18 | |
| 1mld_A | 314 | Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D | 97.16 | |
| 1rjw_A | 339 | ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD | 97.16 | |
| 4huj_A | 220 | Uncharacterized protein; PSI-biology, nysgrc, stru | 97.15 | |
| 5mdh_A | 333 | Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH | 97.14 | |
| 1iz0_A | 302 | Quinone oxidoreductase; APO-enzyme, riken structur | 97.13 | |
| 4gbj_A | 297 | 6-phosphogluconate dehydrogenase NAD-binding; stru | 97.11 | |
| 4e21_A | 358 | 6-phosphogluconate dehydrogenase (decarboxylating; | 97.11 | |
| 3pid_A | 432 | UDP-glucose 6-dehydrogenase; rossmann fold, oxidor | 97.11 | |
| 3d4o_A | 293 | Dipicolinate synthase subunit A; NP_243269.1, stru | 97.1 | |
| 4dup_A | 353 | Quinone oxidoreductase; PSI-biology, structural ge | 97.09 | |
| 2gcg_A | 330 | Glyoxylate reductase/hydroxypyruvate reductase; NA | 97.05 | |
| 1yqd_A | 366 | Sinapyl alcohol dehydrogenase; lignin, monolignol, | 97.05 | |
| 3dtt_A | 245 | NADP oxidoreductase; structural genomics, joint ce | 97.04 | |
| 3g79_A | 478 | NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; | 97.03 | |
| 2nqt_A | 352 | N-acetyl-gamma-glutamyl-phosphate reductase; apopr | 97.03 | |
| 2uyy_A | 316 | N-PAC protein; long-chain dehydrogenase, cytokine; | 97.02 | |
| 3qwb_A | 334 | Probable quinone oxidoreductase; rossmann fold, qu | 97.02 | |
| 2hjs_A | 340 | USG-1 protein homolog; aspartate-semialdehyde dehy | 97.01 | |
| 2ahr_A | 259 | Putative pyrroline carboxylate reductase; pyrrolin | 97.01 | |
| 2rir_A | 300 | Dipicolinate synthase, A chain; structural genomic | 97.01 | |
| 2y0c_A | 478 | BCEC, UDP-glucose dehydrogenase; oxidoreductase, c | 97.0 | |
| 2gf2_A | 296 | Hibadh, 3-hydroxyisobutyrate dehydrogenase; struct | 96.99 | |
| 3jyn_A | 325 | Quinone oxidoreductase; rossmann fold, protein-NAD | 96.99 | |
| 1nyt_A | 271 | Shikimate 5-dehydrogenase; alpha/beta domains, WID | 96.98 | |
| 3gt0_A | 247 | Pyrroline-5-carboxylate reductase; structural geno | 96.98 | |
| 1i36_A | 264 | Conserved hypothetical protein MTH1747; NADP bindi | 96.97 | |
| 2d8a_A | 348 | PH0655, probable L-threonine 3-dehydrogenase; pyro | 96.97 | |
| 2q3e_A | 467 | UDP-glucose 6-dehydrogenase; hexamer, structural g | 96.96 | |
| 2cvz_A | 289 | Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; | 96.94 | |
| 3t4e_A | 312 | Quinate/shikimate dehydrogenase; structural genomi | 96.93 | |
| 2f1k_A | 279 | Prephenate dehydrogenase; tyrosine synthesis, X-RA | 96.93 | |
| 2g5c_A | 281 | Prephenate dehydrogenase; TYRA, oxidoreductase; HE | 96.92 | |
| 2vhw_A | 377 | Alanine dehydrogenase; NAD, secreted, oxidoreducta | 96.91 | |
| 3pqe_A | 326 | L-LDH, L-lactate dehydrogenase; FBP, oxidoreductas | 96.91 | |
| 3obb_A | 300 | Probable 3-hydroxyisobutyrate dehydrogenase; struc | 96.9 | |
| 3i83_A | 320 | 2-dehydropantoate 2-reductase; structural genomics | 96.89 | |
| 3gms_A | 340 | Putative NADPH:quinone reductase; structural genom | 96.89 | |
| 1pjc_A | 361 | Protein (L-alanine dehydrogenase); oxidoreductase, | 96.88 | |
| 3tri_A | 280 | Pyrroline-5-carboxylate reductase; amino acid bios | 96.88 | |
| 1zud_1 | 251 | Adenylyltransferase THIF; thiamin, thiazole, prote | 96.87 | |
| 3ego_A | 307 | Probable 2-dehydropantoate 2-reductase; structural | 96.84 | |
| 1e3j_A | 352 | NADP(H)-dependent ketose reductase; oxidoreductase | 96.84 | |
| 4eye_A | 342 | Probable oxidoreductase; structural genomics, niai | 96.84 | |
| 3p2y_A | 381 | Alanine dehydrogenase/pyridine nucleotide transhy; | 96.83 | |
| 4gx0_A | 565 | TRKA domain protein; membrane protein, ION channel | 96.81 | |
| 1ur5_A | 309 | Malate dehydrogenase; oxidoreductase, tricarboxyli | 96.81 | |
| 3ghy_A | 335 | Ketopantoate reductase protein; oxidoreductase, NA | 96.8 | |
| 3don_A | 277 | Shikimate dehydrogenase; alpha-beta structure, ros | 96.79 | |
| 1yb4_A | 295 | Tartronic semialdehyde reductase; structural genom | 96.79 | |
| 1dlj_A | 402 | UDP-glucose dehydrogenase; rossmann fold, ternary | 96.79 | |
| 3pi7_A | 349 | NADH oxidoreductase; groes-like fold, NAD(P)-bindi | 96.79 | |
| 4gx0_A | 565 | TRKA domain protein; membrane protein, ION channel | 96.79 | |
| 3hn2_A | 312 | 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, str | 96.78 | |
| 2j3h_A | 345 | NADP-dependent oxidoreductase P1; double bond redu | 96.77 | |
| 3phh_A | 269 | Shikimate dehydrogenase; shikimate pathway, helico | 96.77 | |
| 1txg_A | 335 | Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxid | 96.77 | |
| 4a7p_A | 446 | UDP-glucose dehydrogenase; oxidoreductase, carbohy | 96.75 | |
| 3vku_A | 326 | L-LDH, L-lactate dehydrogenase; rossmann fold, NAD | 96.74 | |
| 1wwk_A | 307 | Phosphoglycerate dehydrogenase; riken structural g | 96.74 | |
| 4dio_A | 405 | NAD(P) transhydrogenase subunit alpha PART 1; stru | 96.74 | |
| 1pl8_A | 356 | Human sorbitol dehydrogenase; NAD, oxidoreductase; | 96.74 | |
| 1ks9_A | 291 | KPA reductase;, 2-dehydropantoate 2-reductase; PAN | 96.74 | |
| 1z82_A | 335 | Glycerol-3-phosphate dehydrogenase; TM0378, struct | 96.73 | |
| 2egg_A | 297 | AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff | 96.73 | |
| 3s2e_A | 340 | Zinc-containing alcohol dehydrogenase superfamily; | 96.72 | |
| 3ojo_A | 431 | CAP5O; rossmann fold, complex with cofactor NAD an | 96.72 | |
| 2dbq_A | 334 | Glyoxylate reductase; D-3-phosphoglycerate dehydro | 96.72 | |
| 3d1l_A | 266 | Putative NADP oxidoreductase BF3122; structural ge | 96.72 | |
| 3b1f_A | 290 | Putative prephenate dehydrogenase; enzyme, 4-hydro | 96.71 | |
| 3uog_A | 363 | Alcohol dehydrogenase; structural genomics, protei | 96.71 | |
| 2izz_A | 322 | Pyrroline-5-carboxylate reductase 1; amino-acid bi | 96.71 | |
| 2ozp_A | 345 | N-acetyl-gamma-glutamyl-phosphate reductase; amino | 96.7 | |
| 3gaz_A | 343 | Alcohol dehydrogenase superfamily protein; oxidore | 96.69 | |
| 3k96_A | 356 | Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA | 96.68 | |
| 1yqg_A | 263 | Pyrroline-5-carboxylate reductase; structural geno | 96.67 | |
| 3ktd_A | 341 | Prephenate dehydrogenase; structural genomics, joi | 96.66 | |
| 2ph5_A | 480 | Homospermidine synthase; alpha-beta protein, struc | 96.66 | |
| 1evy_A | 366 | Glycerol-3-phosphate dehydrogenase; rossmann fold, | 96.66 | |
| 3hwr_A | 318 | 2-dehydropantoate 2-reductase; YP_299159.1, PANE/A | 96.65 | |
| 2b5w_A | 357 | Glucose dehydrogenase; nucleotide binding motif, o | 96.64 | |
| 2cdc_A | 366 | Glucose dehydrogenase glucose 1-dehydrogenase, DHG | 96.63 | |
| 1vj0_A | 380 | Alcohol dehydrogenase, zinc-containing; TM0436, st | 96.62 | |
| 2qyt_A | 317 | 2-dehydropantoate 2-reductase; APC81190, porphyrom | 96.61 | |
| 3orq_A | 377 | N5-carboxyaminoimidazole ribonucleotide synthetas; | 96.6 | |
| 3pwz_A | 272 | Shikimate dehydrogenase 3; alpha-beta, oxidoreduct | 96.57 | |
| 1l7d_A | 384 | Nicotinamide nucleotide transhydrogenase, subunit | 96.57 | |
| 2hk9_A | 275 | Shikimate dehydrogenase; shikimate pathway, drug d | 96.57 | |
| 2dq4_A | 343 | L-threonine 3-dehydrogenase; NAD-dependent, oxidor | 96.56 | |
| 3fi9_A | 343 | Malate dehydrogenase; structural genomics, oxidore | 96.56 | |
| 1cdo_A | 374 | Alcohol dehydrogenase; oxidoreductase, oxidoreduct | 96.55 | |
| 3o8q_A | 281 | Shikimate 5-dehydrogenase I alpha; structural geno | 96.54 | |
| 2jhf_A | 374 | Alcohol dehydrogenase E chain; oxidoreductase, met | 96.54 | |
| 2yjz_A | 201 | Metalloreductase steap4; oxidoreductase, metabolic | 95.54 | |
| 2o3j_A | 481 | UDP-glucose 6-dehydrogenase; structural genomics, | 96.52 | |
| 1e3i_A | 376 | Alcohol dehydrogenase, class II; HET: NAD; 2.08A { | 96.52 | |
| 1np3_A | 338 | Ketol-acid reductoisomerase; A DEEP figure-OF-eigh | 96.51 | |
| 4e12_A | 283 | Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1 | 96.5 | |
| 3pwk_A | 366 | Aspartate-semialdehyde dehydrogenase; NADP binding | 96.49 | |
| 3ond_A | 488 | Adenosylhomocysteinase; plant protein, enzyme-subs | 96.48 | |
| 1p9l_A | 245 | Dihydrodipicolinate reductase; oxidoreductase, lys | 96.48 | |
| 2h6e_A | 344 | ADH-4, D-arabinose 1-dehydrogenase; rossman fold, | 96.47 | |
| 2g76_A | 335 | 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidor | 96.47 | |
| 4e4t_A | 419 | Phosphoribosylaminoimidazole carboxylase, ATPase; | 96.46 | |
| 4ej6_A | 370 | Putative zinc-binding dehydrogenase; structural ge | 96.45 | |
| 1f0y_A | 302 | HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive | 96.45 | |
| 1uuf_A | 369 | YAHK, zinc-type alcohol dehydrogenase-like protein | 96.45 | |
| 1p9o_A | 313 | Phosphopantothenoylcysteine synthetase; ligase; 2. | 96.4 | |
| 3k5i_A | 403 | Phosphoribosyl-aminoimidazole carboxylase; purine | 96.4 | |
| 1p0f_A | 373 | NADP-dependent alcohol dehydrogenase; ADH topology | 96.4 | |
| 3u62_A | 253 | Shikimate dehydrogenase; shikimate pathway, oxidor | 96.4 | |
| 4gwg_A | 484 | 6-phosphogluconate dehydrogenase, decarboxylating; | 96.38 | |
| 3two_A | 348 | Mannitol dehydrogenase; cinnamyl-alcohol dehydroge | 96.35 | |
| 3fbg_A | 346 | Putative arginate lyase; structural genomics, unkn | 96.33 | |
| 2fzw_A | 373 | Alcohol dehydrogenase class III CHI chain; S-nitro | 96.32 | |
| 1jvb_A | 347 | NAD(H)-dependent alcohol dehydrogenase; archaeon, | 96.32 | |
| 1x13_A | 401 | NAD(P) transhydrogenase subunit alpha; NAD(H)-bind | 96.32 | |
| 4a0s_A | 447 | Octenoyl-COA reductase/carboxylase; oxidoreductase | 96.32 | |
| 3jtm_A | 351 | Formate dehydrogenase, mitochondrial; mitochondrio | 96.3 | |
| 3dfz_A | 223 | SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase | 96.29 | |
| 1gpj_A | 404 | Glutamyl-tRNA reductase; tRNA-dependent tetrapyrro | 96.28 |
| >3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-44 Score=325.47 Aligned_cols=288 Identities=14% Similarity=0.114 Sum_probs=232.8
Q ss_pred CCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCChhhH--HhhccCceeeEEEEecCCC
Q 017914 58 SPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETAL--MILTTLKNYTHLLVSIPPL 134 (364)
Q Consensus 58 ~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~--~~~~~~d~v~~~~~~~~~~ 134 (364)
|+|+||||| |||||++|+++|+++|++|++++|++.... + .+++++.+|++ .+. ..++++|+|+|+++.....
T Consensus 1 M~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~--~~~~~~~~Dl~-~~~~~~~~~~~d~Vih~a~~~~~~ 76 (311)
T 3m2p_A 1 MSLKIAVTGGTGFLGQYVVESIKNDGNTPIILTRSIGNKA-I--NDYEYRVSDYT-LEDLINQLNDVDAVVHLAATRGSQ 76 (311)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCC--------CCEEEECCCC-HHHHHHHTTTCSEEEECCCCCCSS
T ss_pred CCCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCCccc-C--CceEEEEcccc-HHHHHHhhcCCCEEEEccccCCCC
Confidence 468999999 999999999999999999999999844443 4 38899999999 664 6778999999999875543
Q ss_pred C--CCCChhhhHHHHHHHHhhcCCccEEEEEccceeecCCCCccccCCCCCCCCChhHHHHHHHHHHHHHhhhhcCCcEE
Q 017914 135 E--GTGDPMLKHGELLRSTLMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANPTTELGRLRLSAEKGWLNLGRDLGISAQ 212 (364)
Q Consensus 135 ~--~~~~~~~~~~~~l~~a~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ 212 (364)
. ...+.......++++++++.+++||||+||.++|+.....+++|+++..|.+.|+.+|.++|+++++++++.+++++
T Consensus 77 ~~~~~~~~n~~~~~~ll~a~~~~~~~r~v~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~g~~~~ 156 (311)
T 3m2p_A 77 GKISEFHDNEILTQNLYDACYENNISNIVYASTISAYSDETSLPWNEKELPLPDLMYGVSKLACEHIGNIYSRKKGLCIK 156 (311)
T ss_dssp SCGGGTHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGCCCGGGCSBCTTSCCCCSSHHHHHHHHHHHHHHHHHHHSCCEEE
T ss_pred ChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEccHHHhCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHcCCCEE
Confidence 1 11223345567899999999999999999999999887778999999999999999999999999999988899999
Q ss_pred EEEecceecCCCC---hHHHHHHhcCccc-ccccccCCcccccccHHHHHHHHHHHccCCCCCceEEEeCCCCCCHHHHH
Q 017914 213 VFRLGGIYGPGRS---SVDTIIKQLPLSE-GQKMRRARQYTSRIHVDDICQVLSASIDKPSAWNVYNVVDDDPAPREEVF 288 (364)
Q Consensus 213 ilRp~~v~g~~~~---~~~~~~~~~~~~~-~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~~g~~~~i~~~~~~s~~el~ 288 (364)
++||+.+||++.. .+..+........ ....+++++.++|+|++|+|++++.+++++..+++||+++++.+|+.|++
T Consensus 157 ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~v~Dva~a~~~~~~~~~~~~~~~i~~~~~~s~~e~~ 236 (311)
T 3m2p_A 157 NLRFAHLYGFNEKNNYMINRFFRQAFHGEQLTLHANSVAKREFLYAKDAAKSVIYALKQEKVSGTFNIGSGDALTNYEVA 236 (311)
T ss_dssp EEEECEEECSCC--CCHHHHHHHHHHTCCCEEESSBCCCCEEEEEHHHHHHHHHHHTTCTTCCEEEEECCSCEECHHHHH
T ss_pred EEeeCceeCcCCCCCCHHHHHHHHHHcCCCeEEecCCCeEEceEEHHHHHHHHHHHHhcCCCCCeEEeCCCCcccHHHHH
Confidence 9999999999864 4555444321111 12336788899999999999999999998878899999999999999999
Q ss_pred HHHHHHhcCCCCCcccCCCCCCCCCCCccCCCCCCCeEEEchhHHHhcCcccCCCCHHHHHHHHHHHhcccC
Q 017914 289 AYAWDLVEKKWPGLLKHRKPRENTESSNEKGSSRGEKRVSNVRMKKELGVRLWHPSYKSGLQSIINQMDQPY 360 (364)
Q Consensus 289 ~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~e~l~~~~~~~~~~~ 360 (364)
+.+.+.+|.+.+. ...+. ..........+|++|++++|||+|++ +++|+|+++++|++++-
T Consensus 237 ~~i~~~~g~~~~~-~~~~~---------~~~~~~~~~~~d~~k~~~~lG~~p~~-~~~~~l~~~~~~~~~~~ 297 (311)
T 3m2p_A 237 NTINNAFGNKDNL-LVKNP---------NANEGIHSSYMDSSKAKELLDFSTDY-NFATAVEEIHLLMRGLD 297 (311)
T ss_dssp HHHHHHTTCTTCE-EECSS---------SBCCSCCCBCBCCHHHHHHSCCCCSC-CHHHHHHHHHHHHCC--
T ss_pred HHHHHHhCCCCcc-eecCC---------CCCCCcCceecCHHHHHHHhCCCccc-CHHHHHHHHHHHHHhcc
Confidence 9999999987432 11100 02234456789999999999999999 89999999999999754
|
| >3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.2e-45 Score=332.94 Aligned_cols=298 Identities=16% Similarity=0.121 Sum_probs=233.6
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhh----hhhh-------CCceEEEccCChhhH--HhhccCc
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKK----ELEQ-------SGFDVHLFNANETAL--MILTTLK 122 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~----~l~~-------~~~~~~~~D~~~~~~--~~~~~~d 122 (364)
.++|+||||| |||||++|+++|+++|++|++++|+..... .+.. .+++++.+|++|.+. .+++++|
T Consensus 23 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d 102 (351)
T 3ruf_A 23 FSPKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTTCEQVMKGVD 102 (351)
T ss_dssp HSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCHHHHHHHTTTCS
T ss_pred CCCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhcCCC
Confidence 4568999999 999999999999999999999999654322 2221 688999999999774 6778999
Q ss_pred eeeEEEEecCCCCCCCC------hhhhHHHHHHHHhhcCCccEEEEEccceeecCCCCccccCCCCCCCCChhHHHHHHH
Q 017914 123 NYTHLLVSIPPLEGTGD------PMLKHGELLRSTLMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANPTTELGRLRLSA 196 (364)
Q Consensus 123 ~v~~~~~~~~~~~~~~~------~~~~~~~~l~~a~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~~sK~~~ 196 (364)
+|+|+++.........+ .......++++++++.++++|||+||.++|+.....+++|+.+..|.+.|+.+|..+
T Consensus 103 ~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~ 182 (351)
T 3ruf_A 103 HVLHQAALGSVPRSIVDPITTNATNITGFLNILHAAKNAQVQSFTYAASSSTYGDHPALPKVEENIGNPLSPYAVTKYVN 182 (351)
T ss_dssp EEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGTTCCCSSBCTTCCCCCCSHHHHHHHHH
T ss_pred EEEECCccCCcchhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEecHHhcCCCCCCCCccCCCCCCCChhHHHHHHH
Confidence 99999975332111111 223445788999998899999999999999988888999999999999999999999
Q ss_pred HHHHHHhhhhcCCcEEEEEecceecCCCC-------hHHHHHHhcCc-ccccccccCCcccccccHHHHHHHHHHHccCC
Q 017914 197 EKGWLNLGRDLGISAQVFRLGGIYGPGRS-------SVDTIIKQLPL-SEGQKMRRARQYTSRIHVDDICQVLSASIDKP 268 (364)
Q Consensus 197 E~~~~~~~~~~~~~~~ilRp~~v~g~~~~-------~~~~~~~~~~~-~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~ 268 (364)
|++++.++++.+++++++||+.+||++.. ++..++..... ......+++++.++|||++|+|++++.++.+.
T Consensus 183 E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva~a~~~~~~~~ 262 (351)
T 3ruf_A 183 EIYAQVYARTYGFKTIGLRYFNVFGRRQDPNGAYAAVIPKWTAAMLKGDDVYINGDGETSRDFCYIDNVIQMNILSALAK 262 (351)
T ss_dssp HHHHHHHHHHHCCCCEEEEECSEESTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCEECCEEHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHhCCCEEEEeeCceeCcCCCCCcchhhHHHHHHHHHHcCCCcEEeCCCCeEEeeEEHHHHHHHHHHHHhhc
Confidence 99999998888999999999999998752 33443332111 11223467788999999999999999999873
Q ss_pred --CCCceEEEeCCCCCCHHHHHHHHHHHhcCCCCCcccCCCCCCCCCCCccCCCCCCCeEEEchhHHHhcCcccCCCCHH
Q 017914 269 --SAWNVYNVVDDDPAPREEVFAYAWDLVEKKWPGLLKHRKPRENTESSNEKGSSRGEKRVSNVRMKKELGVRLWHPSYK 346 (364)
Q Consensus 269 --~~g~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~ 346 (364)
..+++||+++++.+|+.|+++.+.+.+|.+ +...... ...............+|++|++++|||+|++ +++
T Consensus 263 ~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~-~~~~~~~-----~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~-~~~ 335 (351)
T 3ruf_A 263 DSAKDNIYNVAVGDRTTLNELSGYIYDELNLI-HHIDKLS-----IKYREFRSGDVRHSQADVTKAIDLLKYRPNI-KIR 335 (351)
T ss_dssp GGGCSEEEEESCSCCEEHHHHHHHHHHHHHTT-CCC----------EEECCCTTCCSBCCBCCHHHHHHHCCCCCC-CHH
T ss_pred cccCCCEEEeCCCCcccHHHHHHHHHHHhCcc-ccccccc-----ccccCCCCCccceeeeCHHHHHHHhCCCCCC-CHH
Confidence 458899999999999999999999999984 2111110 0000111223456789999999999999999 899
Q ss_pred HHHHHHHHHhcccCC
Q 017914 347 SGLQSIINQMDQPYQ 361 (364)
Q Consensus 347 e~l~~~~~~~~~~~~ 361 (364)
|+|+++++|++++++
T Consensus 336 ~~l~~~~~~~~~~~~ 350 (351)
T 3ruf_A 336 EGLRLSMPWYVRFLK 350 (351)
T ss_dssp HHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHhhc
Confidence 999999999998754
|
| >3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-44 Score=318.20 Aligned_cols=281 Identities=35% Similarity=0.595 Sum_probs=228.3
Q ss_pred CCCCeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCChhhHHhhccCceeeEEEEecCCCCC
Q 017914 57 QSPNRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETALMILTTLKNYTHLLVSIPPLEG 136 (364)
Q Consensus 57 ~~~~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~~~~~~~d~v~~~~~~~~~~~~ 136 (364)
.|+|+|||||+||||++|+++|+++|++|++++|++.+...+...+++++.+|++|.+ +.++|+|+|+++....
T Consensus 3 ~m~~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~d~~---~~~~d~vi~~a~~~~~--- 76 (286)
T 3ius_A 3 AMTGTLLSFGHGYTARVLSRALAPQGWRIIGTSRNPDQMEAIRASGAEPLLWPGEEPS---LDGVTHLLISTAPDSG--- 76 (286)
T ss_dssp --CCEEEEETCCHHHHHHHHHHGGGTCEEEEEESCGGGHHHHHHTTEEEEESSSSCCC---CTTCCEEEECCCCBTT---
T ss_pred CCcCcEEEECCcHHHHHHHHHHHHCCCEEEEEEcChhhhhhHhhCCCeEEEecccccc---cCCCCEEEECCCcccc---
Confidence 3568999999999999999999999999999999988877777789999999999955 7889999999975432
Q ss_pred CCChhhhHHHHHHHHhhc--CCccEEEEEccceeecCCCCccccCCCCCCCCChhHHHHHHHHHHHHHhhhhcCCcEEEE
Q 017914 137 TGDPMLKHGELLRSTLMN--GHLQWLGYLSSTGVYGHSGGAWVDEDYPANPTTELGRLRLSAEKGWLNLGRDLGISAQVF 214 (364)
Q Consensus 137 ~~~~~~~~~~~l~~a~~~--~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~il 214 (364)
. .....+++++++. .++++|||+||.++|+.....+++|+++..|.+.|+.+|+++|++++++ .+++++++
T Consensus 77 -~---~~~~~~l~~a~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~---~~~~~~il 149 (286)
T 3ius_A 77 -G---DPVLAALGDQIAARAAQFRWVGYLSTTAVYGDHDGAWVDETTPLTPTAARGRWRVMAEQQWQAV---PNLPLHVF 149 (286)
T ss_dssp -B---CHHHHHHHHHHHHTGGGCSEEEEEEEGGGGCCCTTCEECTTSCCCCCSHHHHHHHHHHHHHHHS---TTCCEEEE
T ss_pred -c---cHHHHHHHHHHHhhcCCceEEEEeecceecCCCCCCCcCCCCCCCCCCHHHHHHHHHHHHHHhh---cCCCEEEE
Confidence 1 2345788888887 7889999999999999888888999999999999999999999999876 58999999
Q ss_pred EecceecCCCChHHHHHHhcCcccccccccCCcccccccHHHHHHHHHHHccCCCCCceEEEeCCCCCCHHHHHHHHHHH
Q 017914 215 RLGGIYGPGRSSVDTIIKQLPLSEGQKMRRARQYTSRIHVDDICQVLSASIDKPSAWNVYNVVDDDPAPREEVFAYAWDL 294 (364)
Q Consensus 215 Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~~g~~~~i~~~~~~s~~el~~~i~~~ 294 (364)
||+.+||++...+..+..+. ...+..+.+.++|+|++|+|++++.+++++..|++||+++++.+|+.|+++.+.+.
T Consensus 150 Rp~~v~G~~~~~~~~~~~~~----~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~~g~~~~i~~~~~~s~~e~~~~i~~~ 225 (286)
T 3ius_A 150 RLAGIYGPGRGPFSKLGKGG----IRRIIKPGQVFSRIHVEDIAQVLAASMARPDPGAVYNVCDDEPVPPQDVIAYAAEL 225 (286)
T ss_dssp EECEEEBTTBSSSTTSSSSC----CCEEECTTCCBCEEEHHHHHHHHHHHHHSCCTTCEEEECCSCCBCHHHHHHHHHHH
T ss_pred eccceECCCchHHHHHhcCC----ccccCCCCcccceEEHHHHHHHHHHHHhCCCCCCEEEEeCCCCccHHHHHHHHHHH
Confidence 99999999876643332221 12223345789999999999999999999888899999999999999999999999
Q ss_pred hcCCCCCcccCCCCCCCCCCCccCCCCCCCeEEEchhHHHhcCcccCCCCHHHHHHHHHHHhc
Q 017914 295 VEKKWPGLLKHRKPRENTESSNEKGSSRGEKRVSNVRMKKELGVRLWHPSYKSGLQSIINQMD 357 (364)
Q Consensus 295 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~e~l~~~~~~~~ 357 (364)
+|.+.+..+...... ..+...........+|++|++++|||+|++|+++|+|+++++..+
T Consensus 226 ~g~~~~~~~~~~~~~---~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~p~~~e~l~~~~~~~~ 285 (286)
T 3ius_A 226 QGLPLPPAVDFDKAD---LTPMARSFYSENKRVRNDRIKEELGVRLKYPNYRVGLEALQADAE 285 (286)
T ss_dssp HTCCCCCEEEGGGSC---CCHHHHHTTSCCCEECCHHHHHTTCCCCSCSSHHHHHHHHHHTCC
T ss_pred cCCCCCcccchhhhc---cChhHHHhhcCCceeehHHHHHHhCCCCCcCCHHHHHHHHHHhcc
Confidence 998755333221110 000001123466789999999999999999789999999988653
|
| >3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-43 Score=313.65 Aligned_cols=274 Identities=26% Similarity=0.363 Sum_probs=223.7
Q ss_pred CCCeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCChhhH--Hhhcc-CceeeEEEEecCCC
Q 017914 58 SPNRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETAL--MILTT-LKNYTHLLVSIPPL 134 (364)
Q Consensus 58 ~~~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~--~~~~~-~d~v~~~~~~~~~~ 134 (364)
.+|+|||||+||||++|+++|+++|++|++++|+.++. ..+++++.+|++|.+. ..+++ +|+|+|+++.....
T Consensus 2 ~~~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~~~~----~~~~~~~~~Dl~d~~~~~~~~~~~~d~vih~a~~~~~~ 77 (286)
T 3gpi_A 2 SLSKILIAGCGDLGLELARRLTAQGHEVTGLRRSAQPM----PAGVQTLIADVTRPDTLASIVHLRPEILVYCVAASEYS 77 (286)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHTTCCEEEEECTTSCC----CTTCCEEECCTTCGGGCTTGGGGCCSEEEECHHHHHHC
T ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCcccc----ccCCceEEccCCChHHHHHhhcCCCCEEEEeCCCCCCC
Confidence 35799999999999999999999999999999987653 2688999999999774 56666 99999999753211
Q ss_pred -CCCCChhhhHHHHHHHHhhcCCccEEEEEccceeecCCCCccccCCCCCCCCChhHHHHHHHHHHHHHhhhhcCCcEEE
Q 017914 135 -EGTGDPMLKHGELLRSTLMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANPTTELGRLRLSAEKGWLNLGRDLGISAQV 213 (364)
Q Consensus 135 -~~~~~~~~~~~~~l~~a~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~i 213 (364)
....+.......++++++++.++++|||+||.++|+.....+++|+++..|.+.|+.+|.++|++ +++ +++++
T Consensus 78 ~~~~~~~n~~~~~~ll~a~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~-~~~-----~~~~i 151 (286)
T 3gpi_A 78 DEHYRLSYVEGLRNTLSALEGAPLQHVFFVSSTGVYGQEVEEWLDEDTPPIAKDFSGKRMLEAEAL-LAA-----YSSTI 151 (286)
T ss_dssp -----CCSHHHHHHHHHHTTTSCCCEEEEEEEGGGCCCCCSSEECTTSCCCCCSHHHHHHHHHHHH-GGG-----SSEEE
T ss_pred HHHHHHHHHHHHHHHHHHHhhCCCCEEEEEcccEEEcCCCCCCCCCCCCCCCCChhhHHHHHHHHH-Hhc-----CCeEE
Confidence 12233345667899999998899999999999999998888899999999999999999999998 643 89999
Q ss_pred EEecceecCCCChH-HHHHHhcCcccccccccCCcccccccHHHHHHHHHHHccC---CCCCceEEEeCCCCCCHHHHHH
Q 017914 214 FRLGGIYGPGRSSV-DTIIKQLPLSEGQKMRRARQYTSRIHVDDICQVLSASIDK---PSAWNVYNVVDDDPAPREEVFA 289 (364)
Q Consensus 214 lRp~~v~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~---~~~g~~~~i~~~~~~s~~el~~ 289 (364)
+||+.+||++...+ ..+.. ....+.+++.++|+|++|+|++++.++++ ...+++||+++++.+|+.|+++
T Consensus 152 lR~~~v~G~~~~~~~~~~~~------~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~ 225 (286)
T 3gpi_A 152 LRFSGIYGPGRLRMIRQAQT------PEQWPARNAWTNRIHRDDGAAFIAYLIQQRSHAVPERLYIVTDNQPLPVHDLLR 225 (286)
T ss_dssp EEECEEEBTTBCHHHHHTTC------GGGSCSSBCEECEEEHHHHHHHHHHHHHHHTTSCCCSEEEECCSCCEEHHHHHH
T ss_pred EecccccCCCchhHHHHHHh------cccCCCcCceeEEEEHHHHHHHHHHHHhhhccCCCCceEEEeCCCCCCHHHHHH
Confidence 99999999987632 22222 11235678889999999999999999998 4668899999999999999999
Q ss_pred HHHHHhcCCCCCcccCCCCCCCCCCCccCCCCCCCeEEEchhHHHhcCcccCCCCHHHHHHHHHHHhcccCCC
Q 017914 290 YAWDLVEKKWPGLLKHRKPRENTESSNEKGSSRGEKRVSNVRMKKELGVRLWHPSYKSGLQSIINQMDQPYQC 362 (364)
Q Consensus 290 ~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~e~l~~~~~~~~~~~~~ 362 (364)
.+.+.+|.+.+.. .. +.......+|++|++ +|||+|++|+++|+|+++++|++....+
T Consensus 226 ~i~~~~g~~~~~~--~~------------~~~~~~~~~d~~k~~-~lG~~p~~~~l~e~l~~~~~~~~~~~~~ 283 (286)
T 3gpi_A 226 WLADRQGIAYPAG--AT------------PPVQGNKKLSNARLL-ASGYQLIYPDYVSGYGALLAAMREGHHH 283 (286)
T ss_dssp HHHHHTTCCCCCS--CC------------CCBCSSCEECCHHHH-HTTCCCSSCSHHHHHHHHHHHHTC----
T ss_pred HHHHHcCCCCCCC--CC------------cccCCCeEeeHHHHH-HcCCCCcCCcHHHHHHHHHHHHhccccc
Confidence 9999999874322 10 123456789999997 9999999978999999999999876543
|
| >4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-43 Score=320.37 Aligned_cols=294 Identities=14% Similarity=0.165 Sum_probs=228.5
Q ss_pred CCCCCeEEEEc-CChhhHHHHHHHHhCC--CEEEEEEeCchh--hhhhh----hCCceEEEccCChhhH--Hhhcc--Cc
Q 017914 56 WQSPNRMLILG-MGFVGRIFAEKIKNQG--WVVSGTCTNVMK--KKELE----QSGFDVHLFNANETAL--MILTT--LK 122 (364)
Q Consensus 56 ~~~~~~vlVtG-tG~iG~~l~~~L~~~g--~~V~~~~r~~~~--~~~l~----~~~~~~~~~D~~~~~~--~~~~~--~d 122 (364)
...+|+||||| |||||++|+++|+++| ++|++++|.... ...+. ..+++++.+|++|.+. .++++ +|
T Consensus 21 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d 100 (346)
T 4egb_A 21 QSNAMNILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTYSGNLNNVKSIQDHPNYYFVKGEIQNGELLEHVIKERDVQ 100 (346)
T ss_dssp ---CEEEEEETTTSHHHHHHHHHHHHHCTTEEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHHTCC
T ss_pred ccCCCeEEEECCccHHHHHHHHHHHhhCCCcEEEEEeccccccchhhhhhhccCCCeEEEEcCCCCHHHHHHHHhhcCCC
Confidence 35568999999 9999999999999999 788888876421 22221 2578999999999774 56665 99
Q ss_pred eeeEEEEecCCCCCCCC------hhhhHHHHHHHHhhcCCccEEEEEccceeecCC-CCccccCCCCCCCCChhHHHHHH
Q 017914 123 NYTHLLVSIPPLEGTGD------PMLKHGELLRSTLMNGHLQWLGYLSSTGVYGHS-GGAWVDEDYPANPTTELGRLRLS 195 (364)
Q Consensus 123 ~v~~~~~~~~~~~~~~~------~~~~~~~~l~~a~~~~~~~r~v~~Ss~~vy~~~-~~~~~~E~~~~~~~~~Y~~sK~~ 195 (364)
+|+|+++.........+ .......+++++++..++++|||+||.++|+.. ...+++|+++..|.+.|+.+|.+
T Consensus 101 ~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~v~~SS~~vy~~~~~~~~~~E~~~~~p~~~Y~~sK~~ 180 (346)
T 4egb_A 101 VIVNFAAESHVDRSIENPIPFYDTNVIGTVTLLELVKKYPHIKLVQVSTDEVYGSLGKTGRFTEETPLAPNSPYSSSKAS 180 (346)
T ss_dssp EEEECCCCC---------CHHHHHHTHHHHHHHHHHHHSTTSEEEEEEEGGGGCCCCSSCCBCTTSCCCCCSHHHHHHHH
T ss_pred EEEECCcccchhhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeCchHHhCCCCcCCCcCCCCCCCCCChhHHHHHH
Confidence 99999987554322222 233445788999998999999999999999976 45689999999999999999999
Q ss_pred HHHHHHHhhhhcCCcEEEEEecceecCCC---ChHHHHHHhcCccc-ccccccCCcccccccHHHHHHHHHHHccCCCCC
Q 017914 196 AEKGWLNLGRDLGISAQVFRLGGIYGPGR---SSVDTIIKQLPLSE-GQKMRRARQYTSRIHVDDICQVLSASIDKPSAW 271 (364)
Q Consensus 196 ~E~~~~~~~~~~~~~~~ilRp~~v~g~~~---~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~~g 271 (364)
+|.+++.++++.+++++++||+.+||++. ..+..++....... ....+.+.+.++|||++|+|++++.+++++..|
T Consensus 181 ~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~~g 260 (346)
T 4egb_A 181 ADMIALAYYKTYQLPVIVTRCSNNYGPYQYPEKLIPLMVTNALEGKKLPLYGDGLNVRDWLHVTDHCSAIDVVLHKGRVG 260 (346)
T ss_dssp HHHHHHHHHHHHCCCEEEEEECEEESTTCCTTSHHHHHHHHHHTTCCCEEETTSCCEECEEEHHHHHHHHHHHHHHCCTT
T ss_pred HHHHHHHHHHHhCCCEEEEeecceeCcCCCccchHHHHHHHHHcCCCceeeCCCCeEEeeEEHHHHHHHHHHHHhcCCCC
Confidence 99999999988899999999999999975 33444443311111 223366788999999999999999999988888
Q ss_pred ceEEEeCCCCCCHHHHHHHHHHHhcCCCCCcccCCCCCCCCCCCccCCCCCCCeEEEchhHHHhcCcccCCCCHHHHHHH
Q 017914 272 NVYNVVDDDPAPREEVFAYAWDLVEKKWPGLLKHRKPRENTESSNEKGSSRGEKRVSNVRMKKELGVRLWHPSYKSGLQS 351 (364)
Q Consensus 272 ~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~e~l~~ 351 (364)
++||+++++.+++.|+++.+.+.+|.+.+. +.... ..........+|++|++++|||+|++ +++|+|++
T Consensus 261 ~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~-~~~~~---------~~~~~~~~~~~d~~k~~~~lG~~p~~-~~~e~l~~ 329 (346)
T 4egb_A 261 EVYNIGGNNEKTNVEVVEQIITLLGKTKKD-IEYVT---------DRLGHDRRYAINAEKMKNEFDWEPKY-TFEQGLQE 329 (346)
T ss_dssp CEEEECCSCCEEHHHHHHHHHHHHTCCGGG-CEEEC---------C--CCCSCCCBCCHHHHHHHCCCCCC-CHHHHHHH
T ss_pred CEEEECCCCceeHHHHHHHHHHHhCCCccc-ccccC---------CCCCCcceeeccHHHHHHHcCCCCCC-CHHHHHHH
Confidence 999999999999999999999999987431 11100 01122345678999999999999999 89999999
Q ss_pred HHHHhcccC
Q 017914 352 IINQMDQPY 360 (364)
Q Consensus 352 ~~~~~~~~~ 360 (364)
+++|++++.
T Consensus 330 ~~~~~~~~~ 338 (346)
T 4egb_A 330 TVQWYEKNE 338 (346)
T ss_dssp HHHHHHHCH
T ss_pred HHHHHHhhh
Confidence 999999864
|
| >3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-43 Score=320.80 Aligned_cols=295 Identities=16% Similarity=0.103 Sum_probs=230.3
Q ss_pred CCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhh-------hCCceEEEccCChhhH--Hhhc--cCceee
Q 017914 58 SPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELE-------QSGFDVHLFNANETAL--MILT--TLKNYT 125 (364)
Q Consensus 58 ~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~-------~~~~~~~~~D~~~~~~--~~~~--~~d~v~ 125 (364)
++|+||||| +||||++|+++|+++|++|++++|+........ ..++.++.+|++|++. ..++ ++|+|+
T Consensus 4 ~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vi 83 (341)
T 3enk_A 4 TKGTILVTGGAGYIGSHTAVELLAHGYDVVIADNLVNSKREAIARIEKITGKTPAFHETDVSDERALARIFDAHPITAAI 83 (341)
T ss_dssp SSCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSSCTHHHHHHHHHHSCCCEEECCCTTCHHHHHHHHHHSCCCEEE
T ss_pred CCcEEEEecCCcHHHHHHHHHHHHCCCcEEEEecCCcchHHHHHHHHhhcCCCceEEEeecCCHHHHHHHHhccCCcEEE
Confidence 458999999 999999999999999999999999765433221 2478999999999774 5555 799999
Q ss_pred EEEEecCCCCCCCC------hhhhHHHHHHHHhhcCCccEEEEEccceeecCCCCccccCCCCCCCCChhHHHHHHHHHH
Q 017914 126 HLLVSIPPLEGTGD------PMLKHGELLRSTLMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANPTTELGRLRLSAEKG 199 (364)
Q Consensus 126 ~~~~~~~~~~~~~~------~~~~~~~~l~~a~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~~sK~~~E~~ 199 (364)
|+++.......... .......++++++++.++++|||+||.++|+.....+++|+.+..|.+.|+.+|.++|.+
T Consensus 84 h~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~ 163 (341)
T 3enk_A 84 HFAALKAVGESVAKPIEYYRNNLDSLLSLLRVMRERAVKRIVFSSSATVYGVPERSPIDETFPLSATNPYGQTKLMAEQI 163 (341)
T ss_dssp ECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGBCSCSSSSBCTTSCCBCSSHHHHHHHHHHHH
T ss_pred ECccccccCccccChHHHHHHHHHHHHHHHHHHHhCCCCEEEEEecceEecCCCCCCCCCCCCCCCCChhHHHHHHHHHH
Confidence 99975432111111 123345678888888889999999999999988888899999999999999999999999
Q ss_pred HHHhhhhcC-CcEEEEEecceecCCC-------------ChHHHHHHh---c--Ccc---cccccccCCcccccccHHHH
Q 017914 200 WLNLGRDLG-ISAQVFRLGGIYGPGR-------------SSVDTIIKQ---L--PLS---EGQKMRRARQYTSRIHVDDI 257 (364)
Q Consensus 200 ~~~~~~~~~-~~~~ilRp~~v~g~~~-------------~~~~~~~~~---~--~~~---~~~~~~~~~~~~~~i~v~Dv 257 (364)
++.++.+.+ ++++++||+++||++. ..+..+... . .+. .....+.+.+.++|+|++|+
T Consensus 164 ~~~~~~~~~~~~~~~lRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~i~v~Dv 243 (341)
T 3enk_A 164 LRDVEAADPSWRVATLRYFNPVGAHESGLIGEDPAGIPNNLMPYVAQVAVGKLEKLRVFGSDYPTPDGTGVRDYIHVVDL 243 (341)
T ss_dssp HHHHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCSSHHHHHHHHHHTSSSCEEEECSCSSSTTSSCEECEEEHHHH
T ss_pred HHHHhhcCCCceEEEEeeccccCCccccccCCCcccCccchHHHHHHHHhcCCCceEEeCCccCCCCCCeeEeeEEHHHH
Confidence 999887765 9999999999999853 122222221 1 111 01122367889999999999
Q ss_pred HHHHHHHccC---CCCCceEEEeCCCCCCHHHHHHHHHHHhcCCCCCcccCCCCCCCCCCCccCCCCCCCeEEEchhHHH
Q 017914 258 CQVLSASIDK---PSAWNVYNVVDDDPAPREEVFAYAWDLVEKKWPGLLKHRKPRENTESSNEKGSSRGEKRVSNVRMKK 334 (364)
Q Consensus 258 a~~~~~~l~~---~~~g~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~ 334 (364)
|++++.++++ ...+++||+++++.+|+.|+++.+.+.+|.+.+..... ..........+|++|+++
T Consensus 244 a~a~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~-----------~~~~~~~~~~~d~~k~~~ 312 (341)
T 3enk_A 244 ARGHIAALDALERRDASLTVNLGTGRGYSVLEVVRAFEKASGRAVPYELVA-----------RRPGDVAECYANPAAAAE 312 (341)
T ss_dssp HHHHHHHHHHHHHHTSCEEEEESCSCCEEHHHHHHHHHHHHCSCCCEEEEC-----------CCTTCCSEECBCCHHHHH
T ss_pred HHHHHHHHHhhhcCCcceEEEeCCCCceeHHHHHHHHHHHhCCCcceeeCC-----------CCCCCccccccCHHHHHH
Confidence 9999999986 25588999999999999999999999999874422111 011233456789999999
Q ss_pred hcCcccCCCCHHHHHHHHHHHhcccCCCCC
Q 017914 335 ELGVRLWHPSYKSGLQSIINQMDQPYQCSP 364 (364)
Q Consensus 335 ~lG~~p~~~~~~e~l~~~~~~~~~~~~~~~ 364 (364)
+|||+|++ +++|+|+++++|++++.+.++
T Consensus 313 ~lG~~p~~-~l~~~l~~~~~~~~~~~~~~~ 341 (341)
T 3enk_A 313 TIGWKAER-DLERMCADHWRWQENNPRGFV 341 (341)
T ss_dssp HHCCCCCC-CHHHHHHHHHHHHHHSTTSCC
T ss_pred HcCCCCCC-CHHHHHHHHHHHHHhcCccCC
Confidence 99999999 899999999999999877543
|
| >4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-43 Score=321.99 Aligned_cols=287 Identities=17% Similarity=0.155 Sum_probs=229.8
Q ss_pred CCCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCChhhH--HhhccCceeeEEEEecC
Q 017914 56 WQSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETAL--MILTTLKNYTHLLVSIP 132 (364)
Q Consensus 56 ~~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~--~~~~~~d~v~~~~~~~~ 132 (364)
...+|+||||| |||||++|+++|+++|++|++++|+... .++.++.+|++|.+. ..+.++|+|+|+++...
T Consensus 16 ~~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~------~~~~~~~~Dl~d~~~~~~~~~~~d~vih~A~~~~ 89 (347)
T 4id9_A 16 PRGSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPSG------TGGEEVVGSLEDGQALSDAIMGVSAVLHLGAFMS 89 (347)
T ss_dssp -----CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCCS------SCCSEEESCTTCHHHHHHHHTTCSEEEECCCCCC
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCC------CCccEEecCcCCHHHHHHHHhCCCEEEECCcccC
Confidence 45678999999 9999999999999999999999998654 578899999999774 67789999999997644
Q ss_pred CCCCC----CChhhhHHHHHHHHhhcCCccEEEEEccceeecC--CCCccccCCCCCCCCChhHHHHHHHHHHHHHhhhh
Q 017914 133 PLEGT----GDPMLKHGELLRSTLMNGHLQWLGYLSSTGVYGH--SGGAWVDEDYPANPTTELGRLRLSAEKGWLNLGRD 206 (364)
Q Consensus 133 ~~~~~----~~~~~~~~~~l~~a~~~~~~~r~v~~Ss~~vy~~--~~~~~~~E~~~~~~~~~Y~~sK~~~E~~~~~~~~~ 206 (364)
..... .+.......+++++++..++++|||+||.++|+. ....+++|+.+..|.+.|+.+|.++|++++.++++
T Consensus 90 ~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~V~~SS~~vyg~~~~~~~~~~E~~~~~~~~~Y~~sK~~~E~~~~~~~~~ 169 (347)
T 4id9_A 90 WAPADRDRMFAVNVEGTRRLLDAASAAGVRRFVFASSGEVYPENRPEFLPVTEDHPLCPNSPYGLTKLLGEELVRFHQRS 169 (347)
T ss_dssp SSGGGHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGTTTTSCSSSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHH
T ss_pred cchhhHHHHHHHHHHHHHHHHHHHHHcCCCeEEEECCHHHhCCCCCCCCCcCCCCCCCCCChHHHHHHHHHHHHHHHHHh
Confidence 32211 0112344578899998889999999999999997 56678999999999999999999999999999888
Q ss_pred cCCcEEEEEeccee-------------cCCC--------------ChHHHHHHhcCcccc-cccccCCccccc----ccH
Q 017914 207 LGISAQVFRLGGIY-------------GPGR--------------SSVDTIIKQLPLSEG-QKMRRARQYTSR----IHV 254 (364)
Q Consensus 207 ~~~~~~ilRp~~v~-------------g~~~--------------~~~~~~~~~~~~~~~-~~~~~~~~~~~~----i~v 254 (364)
.+++++++||+.+| |++. ..+..++........ ...+.+.+.++| +|+
T Consensus 170 ~~~~~~ilRp~~v~~~~~~~~~~~~~~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~i~v 249 (347)
T 4id9_A 170 GAMETVILRFSHTQDATELLDEDSFFSGPRFFLRPRIHQQQNFGNAAIAELLQSRDIGEPSHILARNENGRPFRMHITDT 249 (347)
T ss_dssp SSSEEEEEEECEEECGGGTTCTTSSSHHHHHBHHHHHHHHHHHTCHHHHHHHHHHCCSSCCEEEEECTTCCBCEECEEEH
T ss_pred cCCceEEEccceEeecccccccccccCCCCcccccccccccccchhHHHHHHHHHHcCCCeEEeCCCCcccCCccCcEeH
Confidence 89999999999999 7762 233444433222211 334567888999 999
Q ss_pred HHHHHHHHHHccCC-CCCceEEEeCCCCCCHHHHHHHHHHHhcCCCCCcccCCCCCCCCCCCccCCCCCCCeEEEchhHH
Q 017914 255 DDICQVLSASIDKP-SAWNVYNVVDDDPAPREEVFAYAWDLVEKKWPGLLKHRKPRENTESSNEKGSSRGEKRVSNVRMK 333 (364)
Q Consensus 255 ~Dva~~~~~~l~~~-~~g~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~ 333 (364)
+|+|++++.+++++ ..|++||+++++.+|+.|+++.+.+.+|.+.+. ... +.......+|++|++
T Consensus 250 ~Dva~ai~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~-~~~-------------p~~~~~~~~d~~k~~ 315 (347)
T 4id9_A 250 RDMVAGILLALDHPEAAGGTFNLGADEPADFAALLPKIAALTGLPIVT-VDF-------------PGDGVYYHTSNERIR 315 (347)
T ss_dssp HHHHHHHHHHHHCGGGTTEEEEESCSSCEEHHHHHHHHHHHHCCCEEE-EEC-------------SSCCCBCCBCCHHHH
T ss_pred HHHHHHHHHHhcCcccCCCeEEECCCCcccHHHHHHHHHHHhCCCCce-eeC-------------CCcccccccCHHHHH
Confidence 99999999999988 568899999999999999999999999987332 111 111126778999999
Q ss_pred HhcCcccCCCCHHHHHHHHHHHhcccCCCC
Q 017914 334 KELGVRLWHPSYKSGLQSIINQMDQPYQCS 363 (364)
Q Consensus 334 ~~lG~~p~~~~~~e~l~~~~~~~~~~~~~~ 363 (364)
++|||+|++ +++|+|+++++|++++....
T Consensus 316 ~~lG~~p~~-~~~~~l~~~~~~~~~~~~~~ 344 (347)
T 4id9_A 316 NTLGFEAEW-TMDRMLEEAATARRQRLAKE 344 (347)
T ss_dssp HHHCCCCCC-CHHHHHHHHHHHHHHHCC--
T ss_pred HHhCCCCCC-CHHHHHHHHHHHHHhhhhcc
Confidence 999999999 89999999999999877543
|
| >3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.9e-43 Score=315.18 Aligned_cols=293 Identities=14% Similarity=0.147 Sum_probs=226.5
Q ss_pred CeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCChhhH-HhhccCceeeEEEEecCCCCCC
Q 017914 60 NRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETAL-MILTTLKNYTHLLVSIPPLEGT 137 (364)
Q Consensus 60 ~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~-~~~~~~d~v~~~~~~~~~~~~~ 137 (364)
|+||||| |||||++|+++|+++|++|++++|+..........+++++.+|++|.++ ..+++ |+|+|+++........
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-d~vih~A~~~~~~~~~ 79 (312)
T 3ko8_A 1 MRIVVTGGAGFIGSHLVDKLVELGYEVVVVDNLSSGRREFVNPSAELHVRDLKDYSWGAGIKG-DVVFHFAANPEVRLST 79 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSCCGGGSCTTSEEECCCTTSTTTTTTCCC-SEEEECCSSCSSSGGG
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCCchhhcCCCceEEECccccHHHHhhcCC-CEEEECCCCCCchhhh
Confidence 6899999 9999999999999999999999998766555445788999999999775 44555 9999999854332222
Q ss_pred CCh------hhhHHHHHHHHhhcCCccEEEEEccceeecCCCCccccCCCCCCCCChhHHHHHHHHHHHHHhhhhcCCcE
Q 017914 138 GDP------MLKHGELLRSTLMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANPTTELGRLRLSAEKGWLNLGRDLGISA 211 (364)
Q Consensus 138 ~~~------~~~~~~~l~~a~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~ 211 (364)
.++ +.....++++++++.++++|||+||.++|+.....+++|+.+..|.+.|+.+|.++|.+++.++++.++++
T Consensus 80 ~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~vyg~~~~~~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~~g~~~ 159 (312)
T 3ko8_A 80 TEPIVHFNENVVATFNVLEWARQTGVRTVVFASSSTVYGDADVIPTPEEEPYKPISVYGAAKAAGEVMCATYARLFGVRC 159 (312)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHHCCEE
T ss_pred hCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeCcHHHhCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHhCCCE
Confidence 222 22345678888888889999999999999988888899999999999999999999999999998889999
Q ss_pred EEEEecceecCCCC--hHHHHHHhcCc--ccccccccCCcccccccHHHHHHHHHHHccC----CCCCceEEEeCCCCCC
Q 017914 212 QVFRLGGIYGPGRS--SVDTIIKQLPL--SEGQKMRRARQYTSRIHVDDICQVLSASIDK----PSAWNVYNVVDDDPAP 283 (364)
Q Consensus 212 ~ilRp~~v~g~~~~--~~~~~~~~~~~--~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~----~~~g~~~~i~~~~~~s 283 (364)
+++||+++||++.. .+..++..... ......+.+.+.++|+|++|+|++++.++++ ...+++||+++++.+|
T Consensus 160 ~~lrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~ni~~~~~~s 239 (312)
T 3ko8_A 160 LAVRYANVVGPRLRHGVIYDFIMKLRRNPNVLEVLGDGTQRKSYLYVRDAVEATLAAWKKFEEMDAPFLALNVGNVDAVR 239 (312)
T ss_dssp EEEEECEEECTTCCSSHHHHHHHHHHHCTTEEEEC----CEECEEEHHHHHHHHHHHHHHHHHSCCSEEEEEESCSSCEE
T ss_pred EEEeeccccCcCCCCChHHHHHHHHHhCCCCeEEcCCCCeEEeeEEHHHHHHHHHHHHHhccccCCCCcEEEEcCCCcee
Confidence 99999999999743 33333332111 1112346778899999999999999999987 3557899999999999
Q ss_pred HHHHHHHHHHHhcCCCCCcccCCCCCCCCCCCccCCCCCCCeEEEchhHHHhcCcccCCCCHHHHHHHHHHHhccc
Q 017914 284 REEVFAYAWDLVEKKWPGLLKHRKPRENTESSNEKGSSRGEKRVSNVRMKKELGVRLWHPSYKSGLQSIINQMDQP 359 (364)
Q Consensus 284 ~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~e~l~~~~~~~~~~ 359 (364)
+.|+++.+.+.+|.+. .....+.. ..............+|++|++++|||+|++ +++|+|+++++|++++
T Consensus 240 ~~e~~~~i~~~~g~~~-~~~~~~~~----~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~-~~~~~l~~~~~~~~~~ 309 (312)
T 3ko8_A 240 VLDIAQIVAEVLGLRP-EIRLVPST----PDGRGWPGDVKYMTLAVTKLMKLTGWRPTM-TSAEAVKKTAEDLAKE 309 (312)
T ss_dssp HHHHHHHHHHHHTCCC-EEEEC--------------CCCSEECBCCHHHHHHHCCCCSS-CHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCC-ceeecCcc----ccccCCCCCccccccCHHHHHHHhCCCCCC-CHHHHHHHHHHHHHhh
Confidence 9999999999999873 22211100 000001123345678999999999999999 7999999999999864
|
| >3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-43 Score=326.54 Aligned_cols=305 Identities=15% Similarity=0.165 Sum_probs=229.0
Q ss_pred cccCCCCCeEEEEc-CChhhHHHHHHHHhC-CCEEEEEEeCchhhhhhhh-CCceEEEccCC-hhhH--HhhccCceeeE
Q 017914 53 KSEWQSPNRMLILG-MGFVGRIFAEKIKNQ-GWVVSGTCTNVMKKKELEQ-SGFDVHLFNAN-ETAL--MILTTLKNYTH 126 (364)
Q Consensus 53 ~~~~~~~~~vlVtG-tG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~l~~-~~~~~~~~D~~-~~~~--~~~~~~d~v~~ 126 (364)
.+..+++|+||||| |||||++|+++|+++ |++|++++|+..+...+.. .+++++.+|++ |.+. .+++++|+|+|
T Consensus 18 ~~~~m~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~~d~~~~~~~~~~~d~Vih 97 (372)
T 3slg_A 18 GPGSMKAKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDLVKHERMHFFEGDITINKEWVEYHVKKCDVILP 97 (372)
T ss_dssp -----CCCEEEEESCSSHHHHHHHHHHHHHSSCEEEEEESCCTTTGGGGGSTTEEEEECCTTTCHHHHHHHHHHCSEEEE
T ss_pred CCcccCCCEEEEECCCChHHHHHHHHHHhCCCCEEEEEeCChhhhhhhccCCCeEEEeCccCCCHHHHHHHhccCCEEEE
Confidence 34446678999999 999999999999998 9999999998877655543 68999999999 7664 67789999999
Q ss_pred EEEecCCCCCCCCh------hhhHHHHHHHHhhcCCccEEEEEccceeecCCCCccccCCCCC-------CCCChhHHHH
Q 017914 127 LLVSIPPLEGTGDP------MLKHGELLRSTLMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPA-------NPTTELGRLR 193 (364)
Q Consensus 127 ~~~~~~~~~~~~~~------~~~~~~~l~~a~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~-------~~~~~Y~~sK 193 (364)
+++.........++ ......++++++++.+ +||||+||.++|+.....+++|+++. .|.+.|+.+|
T Consensus 98 ~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~-~~~v~~SS~~vyg~~~~~~~~e~~~~~~~~p~~~p~~~Y~~sK 176 (372)
T 3slg_A 98 LVAIATPATYVKQPLRVFELDFEANLPIVRSAVKYG-KHLVFPSTSEVYGMCADEQFDPDASALTYGPINKPRWIYACSK 176 (372)
T ss_dssp CBCCCCHHHHHHCHHHHHHHHTTTTHHHHHHHHHHT-CEEEEECCGGGGBSCCCSSBCTTTCCEEECCTTCTTHHHHHHH
T ss_pred cCccccHHHHhhCHHHHHHHHHHHHHHHHHHHHHhC-CcEEEeCcHHHhCCCCCCCCCccccccccCCCCCCCCcHHHHH
Confidence 99864432111121 2234568889988888 89999999999998877788887754 5777999999
Q ss_pred HHHHHHHHHhhhhcCCcEEEEEecceecCCCC-----------hHHHHHHhcCcc-cccccccCCcccccccHHHHHHHH
Q 017914 194 LSAEKGWLNLGRDLGISAQVFRLGGIYGPGRS-----------SVDTIIKQLPLS-EGQKMRRARQYTSRIHVDDICQVL 261 (364)
Q Consensus 194 ~~~E~~~~~~~~~~~~~~~ilRp~~v~g~~~~-----------~~~~~~~~~~~~-~~~~~~~~~~~~~~i~v~Dva~~~ 261 (364)
.++|+++++++++ +++++++||+.+||++.. .+..++...... .....+.+++.++|||++|+|+++
T Consensus 177 ~~~E~~~~~~~~~-g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~ 255 (372)
T 3slg_A 177 QLMDRVIWGYGME-GLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGENISLVDGGSQKRAFTYVDDGISAL 255 (372)
T ss_dssp HHHHHHHHHHHTT-TCEEEEEEECSEECSSCCCTTCSBSCSCHHHHHHHHHHHHTCCEEEGGGGCCEEECEEHHHHHHHH
T ss_pred HHHHHHHHHHHHC-CCCEEEEccccccCCCcccccccccccchHHHHHHHHHHcCCCcEEeCCCceEEEEEEHHHHHHHH
Confidence 9999999999877 999999999999999843 333333321111 112335678899999999999999
Q ss_pred HHHccCCC---CCceEEEeCC-CCCCHHHHHHHHHHHhcCCCCCcccCC-CCCCC----CCCCccCCCCCCCeEEEchhH
Q 017914 262 SASIDKPS---AWNVYNVVDD-DPAPREEVFAYAWDLVEKKWPGLLKHR-KPREN----TESSNEKGSSRGEKRVSNVRM 332 (364)
Q Consensus 262 ~~~l~~~~---~g~~~~i~~~-~~~s~~el~~~i~~~~g~~~~~~~~~~-~~~~~----~~~~~~~~~~~~~~~~d~~k~ 332 (364)
+.+++++. .|++||++++ +.+|+.|+++.+.+.+|.+.+. ...+ ..... ...............+|++|+
T Consensus 256 ~~~~~~~~~~~~~~~~ni~~~~~~~s~~e~~~~i~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~ 334 (372)
T 3slg_A 256 MKIIENSNGVATGKIYNIGNPNNNFSVRELANKMLELAAEFPEY-ADSAKRVKLVETTSGAYYGNGYQDVQNRVPKIENT 334 (372)
T ss_dssp HHHHHCGGGTTTTEEEEECCTTCEEEHHHHHHHHHHHHHHCTTT-HHHHHTCCEEEC-------------CCCCBCCHHH
T ss_pred HHHHhcccCcCCCceEEeCCCCCCccHHHHHHHHHHHhCCCccc-ccccccceeeeccccccccCCccccceeecCHHHH
Confidence 99999873 5899999995 7999999999999999987332 1110 00000 000000012334567899999
Q ss_pred HHhcCcccCCCCHHHHHHHHHHHhcccCC
Q 017914 333 KKELGVRLWHPSYKSGLQSIINQMDQPYQ 361 (364)
Q Consensus 333 ~~~lG~~p~~~~~~e~l~~~~~~~~~~~~ 361 (364)
+++|||+|++ +++|+|+++++|++++.+
T Consensus 335 ~~~lG~~p~~-~l~e~l~~~~~~~~~~~~ 362 (372)
T 3slg_A 335 MQELGWAPQF-TFDDALRQIFEAYRGHVA 362 (372)
T ss_dssp HHHHTCCCCC-CHHHHHHHHHHHHTTCHH
T ss_pred HHHcCCCCCC-CHHHHHHHHHHHHHHHHH
Confidence 9999999999 899999999999998754
|
| >3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=6e-43 Score=314.76 Aligned_cols=294 Identities=14% Similarity=0.178 Sum_probs=222.2
Q ss_pred CCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCChhhH-HhhccCceeeEEEEecCCCCC
Q 017914 59 PNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETAL-MILTTLKNYTHLLVSIPPLEG 136 (364)
Q Consensus 59 ~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~-~~~~~~d~v~~~~~~~~~~~~ 136 (364)
||+||||| +||||++|+++|+++|+.|.+..|+..... ....++.++.+|++|.++ ..++++|.|+|+++.......
T Consensus 1 M~~vlVTGatG~iG~~l~~~L~~~g~~v~~~~~~~~~~~-~~~~~~~~~~~Dl~~~~~~~~~~~~d~vih~a~~~~~~~~ 79 (313)
T 3ehe_A 1 MSLIVVTGGAGFIGSHVVDKLSESNEIVVIDNLSSGNEE-FVNEAARLVKADLAADDIKDYLKGAEEVWHIAANPDVRIG 79 (313)
T ss_dssp --CEEEETTTSHHHHHHHHHHTTTSCEEEECCCSSCCGG-GSCTTEEEECCCTTTSCCHHHHTTCSEEEECCCCCCCC-C
T ss_pred CCEEEEECCCchHHHHHHHHHHhCCCEEEEEcCCCCChh-hcCCCcEEEECcCChHHHHHHhcCCCEEEECCCCCChhhh
Confidence 47999999 999999999999999954444444433332 223678999999999333 677899999999986443322
Q ss_pred CCChh------hhHHHHHHHHhhcCCccEEEEEccceeecCCCCccccCCCCCCCCChhHHHHHHHHHHHHHhhhhcCCc
Q 017914 137 TGDPM------LKHGELLRSTLMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANPTTELGRLRLSAEKGWLNLGRDLGIS 210 (364)
Q Consensus 137 ~~~~~------~~~~~~l~~a~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~ 210 (364)
..++. .....++++++++.++++|||+||.++||.....+++|+.+..|.+.|+.+|..+|.+++.++++.+++
T Consensus 80 ~~~~~~~~~~nv~~~~~l~~~~~~~~~~~iv~~SS~~vyg~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~g~~ 159 (313)
T 3ehe_A 80 AENPDEIYRNNVLATYRLLEAMRKAGVSRIVFTSTSTVYGEAKVIPTPEDYPTHPISLYGASKLACEALIESYCHTFDMQ 159 (313)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEECCGGGGCSCSSSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHTTCE
T ss_pred hhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCchHHhCcCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCC
Confidence 23322 234567788888888999999999999998888889999999999999999999999999999888999
Q ss_pred EEEEEecceecCCCC--hHHHHHHhcCc--ccccccccCCcccccccHHHHHHHHHHHccCCCCCceEEEeCCCCCCHHH
Q 017914 211 AQVFRLGGIYGPGRS--SVDTIIKQLPL--SEGQKMRRARQYTSRIHVDDICQVLSASIDKPSAWNVYNVVDDDPAPREE 286 (364)
Q Consensus 211 ~~ilRp~~v~g~~~~--~~~~~~~~~~~--~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~~g~~~~i~~~~~~s~~e 286 (364)
++++||+.+||++.. .+..++..... ......+.+++.++|+|++|+|++++.+++....+++||+++++++|+.|
T Consensus 160 ~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~~~~ni~~~~~~s~~e 239 (313)
T 3ehe_A 160 AWIYRFANVIGRRSTHGVIYDFIMKLKRNPEELEILGNGEQNKSYIYISDCVDAMLFGLRGDERVNIFNIGSEDQIKVKR 239 (313)
T ss_dssp EEEEECSCEESTTCCCSHHHHHHHHHHHCTTEEEESTTSCCEECCEEHHHHHHHHHHHTTCCSSEEEEECCCSCCEEHHH
T ss_pred EEEEeeccccCcCCCcChHHHHHHHHHcCCCceEEeCCCCeEEeEEEHHHHHHHHHHHhccCCCCceEEECCCCCeeHHH
Confidence 999999999999754 33333332111 11124567889999999999999999999966678899999999999999
Q ss_pred HHHHHHHHhcCCCCCcccCCCCCCCCCCCccCCCCCCCeEEEchhHHHhcCcccCCCCHHHHHHHHHHHhcccCCCC
Q 017914 287 VFAYAWDLVEKKWPGLLKHRKPRENTESSNEKGSSRGEKRVSNVRMKKELGVRLWHPSYKSGLQSIINQMDQPYQCS 363 (364)
Q Consensus 287 l~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~e~l~~~~~~~~~~~~~~ 363 (364)
+++.+.+.+|.+. .. .... .............+|++|++ +|||+|++ +++|+|+++++|++++.+.+
T Consensus 240 ~~~~i~~~~g~~~-~~-~~~~------~~~~~~~~~~~~~~d~~k~~-~lG~~p~~-~~~e~l~~~~~~~~~~~~~~ 306 (313)
T 3ehe_A 240 IAEIVCEELGLSP-RF-RFTG------GDRGWKGDVPVMLLSIEKLK-RLGWKPRY-NSEEAVRMAVRDLVEDLDEE 306 (313)
T ss_dssp HHHHHHHHTTCCC-EE-EEC------------------CCBCCHHHH-HHTCCCSC-CHHHHHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHhCCCC-ce-EECC------CccCCccccceeccCHHHHH-HcCCCCCC-CHHHHHHHHHHHHHhCcccc
Confidence 9999999999873 21 1100 00001112234678999995 69999999 89999999999999876543
|
| >2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-42 Score=315.20 Aligned_cols=293 Identities=14% Similarity=0.158 Sum_probs=226.8
Q ss_pred CCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhh-hhhhCCceEEEccCChhhH--Hhhc--cCceeeEEEEecC
Q 017914 59 PNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKK-ELEQSGFDVHLFNANETAL--MILT--TLKNYTHLLVSIP 132 (364)
Q Consensus 59 ~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~l~~~~~~~~~~D~~~~~~--~~~~--~~d~v~~~~~~~~ 132 (364)
||+||||| +||||++|+++|+++|++|++++|+..... .+. .+++++.+|++|.+. ..++ ++|+|+|+++...
T Consensus 1 M~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~d~vih~a~~~~ 79 (330)
T 2c20_A 1 MNSILICGGAGYIGSHAVKKLVDEGLSVVVVDNLQTGHEDAIT-EGAKFYNGDLRDKAFLRDVFTQENIEAVMHFAADSL 79 (330)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGSC-TTSEEEECCTTCHHHHHHHHHHSCEEEEEECCCCCC
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCcCchhhcC-CCcEEEECCCCCHHHHHHHHhhcCCCEEEECCcccC
Confidence 57999999 999999999999999999999999754322 222 378899999999764 5566 8999999997543
Q ss_pred CCCCCCC------hhhhHHHHHHHHhhcCCccEEEEEccceeecCCCCccccCCCCCCCCChhHHHHHHHHHHHHHhhhh
Q 017914 133 PLEGTGD------PMLKHGELLRSTLMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANPTTELGRLRLSAEKGWLNLGRD 206 (364)
Q Consensus 133 ~~~~~~~------~~~~~~~~l~~a~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~~sK~~~E~~~~~~~~~ 206 (364)
......+ .......++++++++.++++|||+||.++|+.....+++|+++..|.+.|+.+|.++|.+++.++++
T Consensus 80 ~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~Ss~~~~~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~ 159 (330)
T 2c20_A 80 VGVSMEKPLQYYNNNVYGALCLLEVMDEFKVDKFIFSSTAATYGEVDVDLITEETMTNPTNTYGETKLAIEKMLHWYSQA 159 (330)
T ss_dssp HHHHHHSHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECCGGGGCSCSSSSBCTTSCCCCSSHHHHHHHHHHHHHHHHHHT
T ss_pred ccccccCHHHHHHHHhHHHHHHHHHHHHcCCCEEEEeCCceeeCCCCCCCCCcCCCCCCCChHHHHHHHHHHHHHHHHHH
Confidence 2110111 1234456888888888899999999999999877778999999999999999999999999999888
Q ss_pred cCCcEEEEEecceecCCC------------ChHHHHHHhcC--ccccccc------ccCCcccccccHHHHHHHHHHHcc
Q 017914 207 LGISAQVFRLGGIYGPGR------------SSVDTIIKQLP--LSEGQKM------RRARQYTSRIHVDDICQVLSASID 266 (364)
Q Consensus 207 ~~~~~~ilRp~~v~g~~~------------~~~~~~~~~~~--~~~~~~~------~~~~~~~~~i~v~Dva~~~~~~l~ 266 (364)
.+++++++||+.+||++. .++..+..... ....... ..+++.++|||++|+|++++.+++
T Consensus 160 ~~~~~~ilrp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~v~v~Dva~a~~~~~~ 239 (330)
T 2c20_A 160 SNLRYKIFRYFNVAGATPNGIIGEDHRPETHLIPLVLQVALGQREKIMMFGDDYNTPDGTCIRDYIHVEDLVAAHFLGLK 239 (330)
T ss_dssp SSCEEEEEECSEEECCCTTCSSCCCCSSCCSHHHHHHHHHTTSSSCEEEECSCCSSSSSSCEECEEEHHHHHHHHHHHHH
T ss_pred hCCcEEEEecCcccCCCCcCccccccccccchHHHHHHHHhhcCCCeEEeCCccccCCCceeEeeEeHHHHHHHHHHHHh
Confidence 899999999999999862 23333333211 0000111 256788999999999999999997
Q ss_pred CCC---CCceEEEeCCCCCCHHHHHHHHHHHhcCCCCCcccCCCCCCCCCCCccCCCCCCCeEEEchhHHHhcCcccCCC
Q 017914 267 KPS---AWNVYNVVDDDPAPREEVFAYAWDLVEKKWPGLLKHRKPRENTESSNEKGSSRGEKRVSNVRMKKELGVRLWHP 343 (364)
Q Consensus 267 ~~~---~g~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~ 343 (364)
++. .+++||+++++.+|+.|+++.+.+.+|.+.+..... . .........+|++|++++|||+|++|
T Consensus 240 ~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~-------~----~~~~~~~~~~d~~k~~~~lG~~p~~~ 308 (330)
T 2c20_A 240 DLQNGGESDFYNLGNGNGFSVKEIVDAVREVTNHEIPAEVAP-------R----RAGDPARLVASSQKAKEKLGWDPRYV 308 (330)
T ss_dssp HHHTTCCCEEEECCCTTCBCHHHHHHHHHHHTTSCCCEEEEC-------C----CSSCCSEECBCCHHHHHHHCCCCSCC
T ss_pred ccccCCCCCeEEeCCCCCccHHHHHHHHHHHhCCCCceeeCC-------C----CCCcccccccCHHHHHHHhCCCCccC
Confidence 642 368999999999999999999999999874422111 0 01122346789999999999999987
Q ss_pred CHHHHHHHHHHHhcccCCCC
Q 017914 344 SYKSGLQSIINQMDQPYQCS 363 (364)
Q Consensus 344 ~~~e~l~~~~~~~~~~~~~~ 363 (364)
+++|+|+++++|++++.+-+
T Consensus 309 ~l~~~l~~~~~~~~~~~~~~ 328 (330)
T 2c20_A 309 NVKTIIEHAWNWHQKQPNGY 328 (330)
T ss_dssp CHHHHHHHHHHHHHHCSSCC
T ss_pred CHHHHHHHHHHHHHHhhhcc
Confidence 89999999999999887654
|
| >1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.5e-42 Score=311.95 Aligned_cols=294 Identities=14% Similarity=0.064 Sum_probs=228.2
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchh----hhhhh-------hCCceEEEccCChhhH--HhhccCc
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMK----KKELE-------QSGFDVHLFNANETAL--MILTTLK 122 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~----~~~l~-------~~~~~~~~~D~~~~~~--~~~~~~d 122 (364)
..+|+||||| |||||++|+++|+++|++|++++|+... ...+. ..++.++.+|++|.+. .+++++|
T Consensus 25 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d 104 (352)
T 1sb8_A 25 AQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACAGVD 104 (352)
T ss_dssp HSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHTTCS
T ss_pred ccCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCccchhhHHHHhhhcccccCCceEEEECCCCCHHHHHHHhcCCC
Confidence 4568999999 9999999999999999999999997532 12111 2578999999999764 6778999
Q ss_pred eeeEEEEecCCCCCCCC------hhhhHHHHHHHHhhcCCccEEEEEccceeecCCCCccccCCCCCCCCChhHHHHHHH
Q 017914 123 NYTHLLVSIPPLEGTGD------PMLKHGELLRSTLMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANPTTELGRLRLSA 196 (364)
Q Consensus 123 ~v~~~~~~~~~~~~~~~------~~~~~~~~l~~a~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~~sK~~~ 196 (364)
+|+|+++.........+ .......++++++...++++|||+||.++|+.....+++|+++..|.+.|+.+|.++
T Consensus 105 ~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~~~E~~~~~~~~~Y~~sK~~~ 184 (352)
T 1sb8_A 105 YVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAKVQSFTYAASSSTYGDHPGLPKVEDTIGKPLSPYAVTKYVN 184 (352)
T ss_dssp EEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGTTCCCSSBCTTCCCCCCSHHHHHHHHH
T ss_pred EEEECCcccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeccHHhcCCCCCCCCCCCCCCCCCChhHHHHHHH
Confidence 99999975331111111 123445788888888889999999999999987777899999999999999999999
Q ss_pred HHHHHHhhhhcCCcEEEEEecceecCCCC-------hHHHHHHhcCcc-cccccccCCcccccccHHHHHHHHHHHccCC
Q 017914 197 EKGWLNLGRDLGISAQVFRLGGIYGPGRS-------SVDTIIKQLPLS-EGQKMRRARQYTSRIHVDDICQVLSASIDKP 268 (364)
Q Consensus 197 E~~~~~~~~~~~~~~~ilRp~~v~g~~~~-------~~~~~~~~~~~~-~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~ 268 (364)
|.+++.++++.+++++++||+.+||+... .+..+....... .....+++++.++|+|++|+|++++.++.+.
T Consensus 185 e~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva~a~~~~~~~~ 264 (352)
T 1sb8_A 185 ELYADVFSRCYGFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGETSRDFCYIENTVQANLLAATAG 264 (352)
T ss_dssp HHHHHHHHHHHCCCCEEEEECCEECTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCEECCEEHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHcCCCEEEEEECceeCcCCCCCcchhhHHHHHHHHHHCCCCcEEeCCCCceEeeEEHHHHHHHHHHHHhcc
Confidence 99999998888999999999999998742 233333221101 1112356778899999999999999988863
Q ss_pred --CCCceEEEeCCCCCCHHHHHHHHHHHh---cCCCCCcccCCCCCCCCCCCccCCCCCCCeEEEchhHHHhcCcccCCC
Q 017914 269 --SAWNVYNVVDDDPAPREEVFAYAWDLV---EKKWPGLLKHRKPRENTESSNEKGSSRGEKRVSNVRMKKELGVRLWHP 343 (364)
Q Consensus 269 --~~g~~~~i~~~~~~s~~el~~~i~~~~---g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~ 343 (364)
..|++||+++++.+|+.|+++.+.+.+ |.+.+....+. . ..........+|++|++++|||+|++
T Consensus 265 ~~~~~~~~ni~~~~~~s~~e~~~~i~~~~~~~g~~~~~~~~~~-----~----~~~~~~~~~~~d~~k~~~~lG~~p~~- 334 (352)
T 1sb8_A 265 LDARNQVYNIAVGGRTSLNQLFFALRDGLAENGVSYHREPVYR-----D----FREGDVRHSLADISKAAKLLGYAPKY- 334 (352)
T ss_dssp GGGCSEEEEESCSCCEEHHHHHHHHHHHHHHTTCCCCCCCEEE-----C----CCTTCCSBCCBCCHHHHHHTCCCCCC-
T ss_pred ccCCCceEEeCCCCCccHHHHHHHHHHHHHhcCCCCCCCceec-----C----CCccchhhccCCHHHHHHHhCCCCCC-
Confidence 458899999999999999999999999 87743211110 0 01112345678999999999999999
Q ss_pred CHHHHHHHHHHHhcccC
Q 017914 344 SYKSGLQSIINQMDQPY 360 (364)
Q Consensus 344 ~~~e~l~~~~~~~~~~~ 360 (364)
+++|+|+++++|+++++
T Consensus 335 ~~~e~l~~~~~~~~~~~ 351 (352)
T 1sb8_A 335 DVSAGVALAMPWYIMFL 351 (352)
T ss_dssp CHHHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHHhc
Confidence 79999999999998765
|
| >3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-41 Score=311.97 Aligned_cols=288 Identities=15% Similarity=0.085 Sum_probs=224.4
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHh--CCCEEEEEEeCch-------------hhhhhhhCCceEEEccCChhhH--Hh-
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKN--QGWVVSGTCTNVM-------------KKKELEQSGFDVHLFNANETAL--MI- 117 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~--~g~~V~~~~r~~~-------------~~~~l~~~~~~~~~~D~~~~~~--~~- 117 (364)
..+|+||||| +||||++|+++|++ +|++|++++|+.. ....+...++.++.+|++|++. .+
T Consensus 8 ~~~~~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~ 87 (362)
T 3sxp_A 8 LENQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKGEVIAADINNPLDLRRLE 87 (362)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHHCTTSEEEEEECCCCC-------CCCCCCGGGGTTCCSEEEECCTTCHHHHHHHT
T ss_pred cCCCEEEEECCCCHHHHHHHHHHHhhCCCCeEEEEECCCccccccccchhhhhhhhhccccCceEEECCCCCHHHHHHhh
Confidence 4568999998 99999999999999 9999999999654 1222333567999999999774 44
Q ss_pred hccCceeeEEEEecCCCCC-C---CChhhhHHHHHHHHhhcCCccEEEEEccceeecCCCCccccCCCCCCCCChhHHHH
Q 017914 118 LTTLKNYTHLLVSIPPLEG-T---GDPMLKHGELLRSTLMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANPTTELGRLR 193 (364)
Q Consensus 118 ~~~~d~v~~~~~~~~~~~~-~---~~~~~~~~~~l~~a~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~~sK 193 (364)
..++|+|+|+|+....... . .+.......++++++++.+++ |||+||.++||.... +++|+++..|.++|+.+|
T Consensus 88 ~~~~D~vih~A~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~-~V~~SS~~vyg~~~~-~~~E~~~~~p~~~Y~~sK 165 (362)
T 3sxp_A 88 KLHFDYLFHQAAVSDTTMLNQELVMKTNYQAFLNLLEIARSKKAK-VIYASSAGVYGNTKA-PNVVGKNESPENVYGFSK 165 (362)
T ss_dssp TSCCSEEEECCCCCGGGCCCHHHHHHHHTHHHHHHHHHHHHTTCE-EEEEEEGGGGCSCCS-SBCTTSCCCCSSHHHHHH
T ss_pred ccCCCEEEECCccCCccccCHHHHHHHHHHHHHHHHHHHHHcCCc-EEEeCcHHHhCCCCC-CCCCCCCCCCCChhHHHH
Confidence 5789999999985432111 0 112234456888888888887 999999999998776 899999999999999999
Q ss_pred HHHHHHHHHhhhhcCCcEEEEEecceecCCCC-------hHHHHHHhcCcc-cccccccCCcccccccHHHHHHHHHHHc
Q 017914 194 LSAEKGWLNLGRDLGISAQVFRLGGIYGPGRS-------SVDTIIKQLPLS-EGQKMRRARQYTSRIHVDDICQVLSASI 265 (364)
Q Consensus 194 ~~~E~~~~~~~~~~~~~~~ilRp~~v~g~~~~-------~~~~~~~~~~~~-~~~~~~~~~~~~~~i~v~Dva~~~~~~l 265 (364)
.++|.+++.++.+ ++++++||+++||++.. .+..+....... .....+.+.+.++|+|++|+|++++.++
T Consensus 166 ~~~E~~~~~~~~~--~~~~~lR~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~ai~~~~ 243 (362)
T 3sxp_A 166 LCMDEFVLSHSND--NVQVGLRYFNVYGPREFYKEKTASMVLQLALGAMAFKEVKLFEFGEQLRDFVYIEDVIQANVKAM 243 (362)
T ss_dssp HHHHHHHHHTTTT--SCEEEEEECSEESTTCGGGGGGSCHHHHHHHHHHTTSEEECSGGGCCEEECEEHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhcc--CCEEEEEeCceeCcCCCCCCcchhHHHHHHHHHHhCCCeEEECCCCeEEccEEHHHHHHHHHHHH
Confidence 9999999998765 89999999999999853 344444331111 1123366788999999999999999999
Q ss_pred cCCCCCceEEEeCCCCCCHHHHHHHHHHHhcCCCCCcccCCCCCCCCCCCccCCCCCCCeEEEchhHHHhcCcccCCCCH
Q 017914 266 DKPSAWNVYNVVDDDPAPREEVFAYAWDLVEKKWPGLLKHRKPRENTESSNEKGSSRGEKRVSNVRMKKELGVRLWHPSY 345 (364)
Q Consensus 266 ~~~~~g~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~ 345 (364)
+++..| +||+++++.+|+.|+++.+.+.+| +.+ ....+ .+ .........+|++|++++|||+|++ ++
T Consensus 244 ~~~~~g-~~~i~~~~~~s~~e~~~~i~~~~g-~~~-~~~~~-------~~--~~~~~~~~~~d~~k~~~~lG~~p~~-~l 310 (362)
T 3sxp_A 244 KAQKSG-VYNVGYSQARSYNEIVSILKEHLG-DFK-VTYIK-------NP--YAFFQKHTQAHIEPTILDLDYTPLY-DL 310 (362)
T ss_dssp TCSSCE-EEEESCSCEEEHHHHHHHHHHHHC-CCE-EECCC----------------CCCCBCCHHHHHHHCCCCCC-CH
T ss_pred hcCCCC-EEEeCCCCCccHHHHHHHHHHHcC-CCc-eEECC-------CC--CcCcccceecCHHHHHHHhCCCCCC-CH
Confidence 988777 999999999999999999999999 522 11110 00 0234456789999999999999999 79
Q ss_pred HHHHHHHHHHhcccCC
Q 017914 346 KSGLQSIINQMDQPYQ 361 (364)
Q Consensus 346 ~e~l~~~~~~~~~~~~ 361 (364)
+|+|+++++|++++++
T Consensus 311 ~e~l~~~~~~~~~~~~ 326 (362)
T 3sxp_A 311 ESGIKDYLPHIHAIFK 326 (362)
T ss_dssp HHHHHHHHHHHTCC--
T ss_pred HHHHHHHHHHHHHHhh
Confidence 9999999999998764
|
| >2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-41 Score=307.64 Aligned_cols=289 Identities=18% Similarity=0.131 Sum_probs=223.1
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCChhhH--Hhhcc--CceeeEEEEec
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETAL--MILTT--LKNYTHLLVSI 131 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~--~~~~~--~d~v~~~~~~~ 131 (364)
..+|+||||| +||||++|+++|+++|++|++++|+... ..+ ++.++.+|++|++. ..+++ +|+|+|+++..
T Consensus 10 ~~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-~~l---~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~A~~~ 85 (321)
T 2pk3_A 10 HGSMRALITGVAGFVGKYLANHLTEQNVEVFGTSRNNEA-KLP---NVEMISLDIMDSQRVKKVISDIKPDYIFHLAAKS 85 (321)
T ss_dssp ---CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCTTC-CCT---TEEEEECCTTCHHHHHHHHHHHCCSEEEECCSCC
T ss_pred cCcceEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcc-ccc---eeeEEECCCCCHHHHHHHHHhcCCCEEEEcCccc
Confidence 4568999999 9999999999999999999999998665 222 78899999999764 55554 89999999764
Q ss_pred CCCCCCCCh------hhhHHHHHHHHhhcC-CccEEEEEccceeecCC--CCccccCCCCCCCCChhHHHHHHHHHHHHH
Q 017914 132 PPLEGTGDP------MLKHGELLRSTLMNG-HLQWLGYLSSTGVYGHS--GGAWVDEDYPANPTTELGRLRLSAEKGWLN 202 (364)
Q Consensus 132 ~~~~~~~~~------~~~~~~~l~~a~~~~-~~~r~v~~Ss~~vy~~~--~~~~~~E~~~~~~~~~Y~~sK~~~E~~~~~ 202 (364)
.......+. ......++++++... ++++|||+||.++|+.. ...+++|+++..|.+.|+.+|.++|.+++.
T Consensus 86 ~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~v~g~~~~~~~~~~E~~~~~~~~~Y~~sK~~~E~~~~~ 165 (321)
T 2pk3_A 86 SVKDSWLNKKGTFSTNVFGTLHVLDAVRDSNLDCRILTIGSSEEYGMILPEESPVSEENQLRPMSPYGVSKASVGMLARQ 165 (321)
T ss_dssp CHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEEGGGTBSCCGGGCSBCTTSCCBCCSHHHHHHHHHHHHHHH
T ss_pred chhhhhhcHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEccHHhcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHH
Confidence 321111122 223356777777654 68999999999999876 566799999999999999999999999999
Q ss_pred hhhhcCCcEEEEEecceecCCCC---hHHHHHHhcCc---c---cccccccCCcccccccHHHHHHHHHHHccCCCCCce
Q 017914 203 LGRDLGISAQVFRLGGIYGPGRS---SVDTIIKQLPL---S---EGQKMRRARQYTSRIHVDDICQVLSASIDKPSAWNV 273 (364)
Q Consensus 203 ~~~~~~~~~~ilRp~~v~g~~~~---~~~~~~~~~~~---~---~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~~g~~ 273 (364)
++++.|++++++||+++||++.. .+..+...... . .....+.+.+.++|+|++|+|++++.+++++..|++
T Consensus 166 ~~~~~gi~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~g~~ 245 (321)
T 2pk3_A 166 YVKAYGMDIIHTRTFNHIGPGQSLGFVTQDFAKQIVDIEMEKQEPIIKVGNLEAVRDFTDVRDIVQAYWLLSQYGKTGDV 245 (321)
T ss_dssp HHHHHCCEEEEEEECEEECTTCCTTSHHHHHHHHHHHHHTTSSCSEEEESCSSCEEEEEEHHHHHHHHHHHHHHCCTTCE
T ss_pred HHHHcCCCEEEEEeCcccCcCCCCCchHHHHHHHHHHHhcCCCCCeEEeCCCCcEEeeEEHHHHHHHHHHHHhCCCCCCe
Confidence 88878999999999999999854 23333322100 1 112345667889999999999999999987766889
Q ss_pred EEEeCCCCCCHHHHHHHHHHHhcCCCCCcccCCCCCCCCCCCccCCCCCCCeEEEchhHHHhcCcccCCCCHHHHHHHHH
Q 017914 274 YNVVDDDPAPREEVFAYAWDLVEKKWPGLLKHRKPRENTESSNEKGSSRGEKRVSNVRMKKELGVRLWHPSYKSGLQSII 353 (364)
Q Consensus 274 ~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~e~l~~~~ 353 (364)
||+++++.+++.|+++.+.+.+|.+.+ ....+. ...........+|++|++++|||+|++ +++|+|++++
T Consensus 246 ~~i~~~~~~s~~e~~~~i~~~~g~~~~-~~~~p~--------~~~~~~~~~~~~d~~k~~~~lG~~p~~-~~~e~l~~~~ 315 (321)
T 2pk3_A 246 YNVCSGIGTRIQDVLDLLLAMANVKID-TELNPL--------QLRPSEVPTLIGSNKRLKDSTGWKPRI-PLEKSLFEIL 315 (321)
T ss_dssp EEESCSCEEEHHHHHHHHHHHSSSCCE-EEECGG--------GCCSSCCSBCCBCCHHHHHHHCCCCCS-CHHHHHHHHH
T ss_pred EEeCCCCCeeHHHHHHHHHHHhCCCCc-eeeccc--------cCCCcccchhccCHHHHHHHcCCCcCC-CHHHHHHHHH
Confidence 999999999999999999999998632 111110 001122345778999999999999999 8999999999
Q ss_pred HHhccc
Q 017914 354 NQMDQP 359 (364)
Q Consensus 354 ~~~~~~ 359 (364)
+|++++
T Consensus 316 ~~~~~~ 321 (321)
T 2pk3_A 316 QSYRQA 321 (321)
T ss_dssp HHHHTC
T ss_pred HHHhcC
Confidence 999864
|
| >3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-41 Score=306.49 Aligned_cols=281 Identities=16% Similarity=0.139 Sum_probs=220.1
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCch----hhhhhh----hCCceEEEccCChhhHHhhccCceeeEE
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVM----KKKELE----QSGFDVHLFNANETALMILTTLKNYTHL 127 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~----~~~~l~----~~~~~~~~~D~~~~~~~~~~~~d~v~~~ 127 (364)
.++|+||||| |||||++|+++|+++|++|++++|+.. ....+. ..+++++.+|++ ++|+|+|+
T Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~--------~~d~vi~~ 76 (321)
T 3vps_A 5 TLKHRILITGGAGFIGGHLARALVASGEEVTVLDDLRVPPMIPPEGTGKFLEKPVLELEERDLS--------DVRLVYHL 76 (321)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCSSCCSSCCTTSSEEECSCGGGCCHHHHT--------TEEEEEEC
T ss_pred cCCCeEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcccccchhhhhhhccCCCeeEEeCccc--------cCCEEEEC
Confidence 3468999999 999999999999999999999999765 222111 123344444433 78999999
Q ss_pred EEecCCCC------CCCChhhhHHHHHHHHhhcCCccEEEEEccceeecCCCCccccCCCCCCCCChhHHHHHHHHHHHH
Q 017914 128 LVSIPPLE------GTGDPMLKHGELLRSTLMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANPTTELGRLRLSAEKGWL 201 (364)
Q Consensus 128 ~~~~~~~~------~~~~~~~~~~~~l~~a~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~~sK~~~E~~~~ 201 (364)
++...... .... ......++++++++.++++|||+||.++|+.....+++|+.+..|.+.|+.+|..+|.+++
T Consensus 77 a~~~~~~~~~~~~~~~~~-n~~~~~~ll~a~~~~~v~~~v~~SS~~v~~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~ 155 (321)
T 3vps_A 77 ASHKSVPRSFKQPLDYLD-NVDSGRHLLALCTSVGVPKVVVGSTCEVYGQADTLPTPEDSPLSPRSPYAASKVGLEMVAG 155 (321)
T ss_dssp CCCCCHHHHTTSTTTTHH-HHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHHHHHHHHHHHHH
T ss_pred CccCChHHHHhCHHHHHH-HHHHHHHHHHHHHHcCCCeEEEecCHHHhCCCCCCCCCCCCCCCCCChhHHHHHHHHHHHH
Confidence 98654211 1112 4455678999998888999999999999998888889999999999999999999999999
Q ss_pred HhhhhcCC-cEEEEEecceecCCCC---hHHHHHHhcCcc-cccccccCCcccccccHHHHHHHHHHHccCCCCCceEEE
Q 017914 202 NLGRDLGI-SAQVFRLGGIYGPGRS---SVDTIIKQLPLS-EGQKMRRARQYTSRIHVDDICQVLSASIDKPSAWNVYNV 276 (364)
Q Consensus 202 ~~~~~~~~-~~~ilRp~~v~g~~~~---~~~~~~~~~~~~-~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~~g~~~~i 276 (364)
.+++++++ +++++||+.+||++.. ++..+....... .....+++.+.++|+|++|+|++++.+++++..| +||+
T Consensus 156 ~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~g-~~~i 234 (321)
T 3vps_A 156 AHQRASVAPEVGIVRFFNVYGPGERPDALVPRLCANLLTRNELPVEGDGEQRRDFTYITDVVDKLVALANRPLPS-VVNF 234 (321)
T ss_dssp HHHHSSSSCEEEEEEECEEECTTCCTTSHHHHHHHHHHHHSEEEEETTSCCEECEEEHHHHHHHHHHGGGSCCCS-EEEE
T ss_pred HHHHHcCCCceEEEEeccccCcCCCCCChHHHHHHHHHcCCCeEEeCCCCceEceEEHHHHHHHHHHHHhcCCCC-eEEe
Confidence 99988899 9999999999999854 344433321111 1123456788999999999999999999998778 9999
Q ss_pred eCCCCCCHHHHHHHHHHHhcCCCCCcccCCCCCCCCCCCccCCCCCCCeEEEchhHHHhcCccc-CCCCHHHHHHHHHHH
Q 017914 277 VDDDPAPREEVFAYAWDLVEKKWPGLLKHRKPRENTESSNEKGSSRGEKRVSNVRMKKELGVRL-WHPSYKSGLQSIINQ 355 (364)
Q Consensus 277 ~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p-~~~~~~e~l~~~~~~ 355 (364)
++++.+|+.|+++.+. .+|.+.+.. ..+ ..........+|++|++++|||+| ++ +++|+|+++++|
T Consensus 235 ~~~~~~s~~e~~~~i~-~~g~~~~~~-~~~----------~~~~~~~~~~~d~~k~~~~lG~~p~~~-~~~~~l~~~~~~ 301 (321)
T 3vps_A 235 GSGQSLSVNDVIRILQ-ATSPAAEVA-RKQ----------PRPNEITEFRADTALQTRQIGERSGGI-GIEEGIRLTLEW 301 (321)
T ss_dssp SCSCCEEHHHHHHHHH-TTCTTCEEE-EEC----------CCTTCCSBCCBCCHHHHHHHCCCSCCC-CHHHHHHHHHHH
T ss_pred cCCCcccHHHHHHHHH-HhCCCCccc-cCC----------CCCCCcceeeccHHHHHHHhCCCCCcC-CHHHHHHHHHHH
Confidence 9999999999999999 999873321 110 012234567899999999999999 77 899999999999
Q ss_pred hcccC
Q 017914 356 MDQPY 360 (364)
Q Consensus 356 ~~~~~ 360 (364)
++++.
T Consensus 302 ~~~~~ 306 (321)
T 3vps_A 302 WQSRD 306 (321)
T ss_dssp HHTSC
T ss_pred HHhCC
Confidence 99764
|
| >2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-41 Score=306.28 Aligned_cols=295 Identities=11% Similarity=0.088 Sum_probs=220.1
Q ss_pred CCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCChhhH--HhhccCceeeEEEEecCCC
Q 017914 58 SPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETAL--MILTTLKNYTHLLVSIPPL 134 (364)
Q Consensus 58 ~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~--~~~~~~d~v~~~~~~~~~~ 134 (364)
.+|+||||| +||||++|+++|+++|++|++++|+..+...+...+++++.+|++|.+. ..++++|+|+|+++.....
T Consensus 12 ~~M~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih~a~~~~~~ 91 (342)
T 2x4g_A 12 AHVKYAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQRLAYLEPECRVAEMLDHAGLERALRGLDGVIFSAGYYPSR 91 (342)
T ss_dssp CCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECTTSCGGGGGGGCCEEEECCTTCHHHHHHHTTTCSEEEEC-------
T ss_pred cCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecChHhhhhhccCCeEEEEecCCCHHHHHHHHcCCCEEEECCccCcCC
Confidence 347999999 9999999999999999999999998776665554588999999999774 6778999999999864421
Q ss_pred C-CCC---ChhhhHHHHHHHHhhcCCccEEEEEccceeecCCCC--ccccCCCCCCC----CChhHHHHHHHHHHHHHhh
Q 017914 135 E-GTG---DPMLKHGELLRSTLMNGHLQWLGYLSSTGVYGHSGG--AWVDEDYPANP----TTELGRLRLSAEKGWLNLG 204 (364)
Q Consensus 135 ~-~~~---~~~~~~~~~l~~a~~~~~~~r~v~~Ss~~vy~~~~~--~~~~E~~~~~~----~~~Y~~sK~~~E~~~~~~~ 204 (364)
. ... +.......++++++...++++|||+||.++|+.... .+ +|+++..| .+.|+.+|.++|.++++++
T Consensus 92 ~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~~~-~E~~~~~p~~~~~~~Y~~sK~~~e~~~~~~~ 170 (342)
T 2x4g_A 92 PRRWQEEVASALGQTNPFYAACLQARVPRILYVGSAYAMPRHPQGLPG-HEGLFYDSLPSGKSSYVLCKWALDEQAREQA 170 (342)
T ss_dssp -----CHHHHHHHHHHHHHHHHHHHTCSCEEEECCGGGSCCCTTSSCB-CTTCCCSSCCTTSCHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEECCHHhhCcCCCCCCC-CCCCCCCccccccChHHHHHHHHHHHHHHHh
Confidence 1 111 123345678888888888999999999999987654 44 89999888 8999999999999999988
Q ss_pred hhcCCcEEEEEecceecCCC-C-hHHHHHHhcCcccccccccCCcccccccHHHHHHHHHHHccCCCCCceEEEeCCCCC
Q 017914 205 RDLGISAQVFRLGGIYGPGR-S-SVDTIIKQLPLSEGQKMRRARQYTSRIHVDDICQVLSASIDKPSAWNVYNVVDDDPA 282 (364)
Q Consensus 205 ~~~~~~~~ilRp~~v~g~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~~g~~~~i~~~~~~ 282 (364)
+. +++++++||+.+||+.. . .+..+...........+ +++.++|+|++|+|++++.+++++..|++||+++++ +
T Consensus 171 ~~-g~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~v~Dva~~~~~~~~~~~~g~~~~v~~~~-~ 246 (342)
T 2x4g_A 171 RN-GLPVVIGIPGMVLGELDIGPTTGRVITAIGNGEMTHY--VAGQRNVIDAAEAGRGLLMALERGRIGERYLLTGHN-L 246 (342)
T ss_dssp HT-TCCEEEEEECEEECSCCSSCSTTHHHHHHHTTCCCEE--ECCEEEEEEHHHHHHHHHHHHHHSCTTCEEEECCEE-E
T ss_pred hc-CCcEEEEeCCceECCCCccccHHHHHHHHHcCCCccc--cCCCcceeeHHHHHHHHHHHHhCCCCCceEEEcCCc-c
Confidence 76 99999999999999875 2 03333322111111112 567789999999999999999877668899999999 9
Q ss_pred CHHHHHHHHHHHhcCCCCCcccCCC--------------CCC-CCCCCccCCCCCCCeEEEchhHHHhcCc-ccCCCCHH
Q 017914 283 PREEVFAYAWDLVEKKWPGLLKHRK--------------PRE-NTESSNEKGSSRGEKRVSNVRMKKELGV-RLWHPSYK 346 (364)
Q Consensus 283 s~~el~~~i~~~~g~~~~~~~~~~~--------------~~~-~~~~~~~~~~~~~~~~~d~~k~~~~lG~-~p~~~~~~ 346 (364)
|+.|+++.+.+.+|.+.+..++... ... ....+...........+|++|++++||| +| + +++
T Consensus 247 s~~e~~~~i~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~~p-~-~~~ 324 (342)
T 2x4g_A 247 EMADLTRRIAELLGQPAPQPMSMAMARALATLGRLRYRVSGQLPLLDETAIEVMAGGQFLDGRKAREELGFFST-T-ALD 324 (342)
T ss_dssp EHHHHHHHHHHHHTCCCCEEECHHHHHHHHHHHHC----------------CCTTCCCCBCCHHHHHHHCCCCC-S-CHH
T ss_pred cHHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHHHHHHHhhCCCCCCCHHHHHHHhcCcccChHHHHHhCCCCCC-C-CHH
Confidence 9999999999999987432111000 000 0001111122345677899999999999 99 6 899
Q ss_pred HHHHHHHHHhccc
Q 017914 347 SGLQSIINQMDQP 359 (364)
Q Consensus 347 e~l~~~~~~~~~~ 359 (364)
|+|+++++|++++
T Consensus 325 ~~l~~~~~~~~~~ 337 (342)
T 2x4g_A 325 DTLLRAIDWFRDN 337 (342)
T ss_dssp HHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHc
Confidence 9999999999865
|
| >2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-41 Score=310.83 Aligned_cols=289 Identities=17% Similarity=0.157 Sum_probs=225.8
Q ss_pred CCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCChhhH--HhhccCceeeEEEEecCCC
Q 017914 58 SPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETAL--MILTTLKNYTHLLVSIPPL 134 (364)
Q Consensus 58 ~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~--~~~~~~d~v~~~~~~~~~~ 134 (364)
+||+||||| +||||++|+++|+++|++|++++|+..........+++++.+|++|.+. ..++++|+|+|+++.....
T Consensus 28 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~Vih~A~~~~~~ 107 (379)
T 2c5a_A 28 ENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTEDMFCDEFHLVDLRVMENCLKVTEGVDHVFNLAADMGGM 107 (379)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSCGGGTCSEEEECCTTSHHHHHHHHTTCSEEEECCCCCCCH
T ss_pred cCCeEEEECCccHHHHHHHHHHHHCCCeEEEEECCCccchhhccCCceEEECCCCCHHHHHHHhCCCCEEEECceecCcc
Confidence 568999999 9999999999999999999999998765444444678999999999774 6778999999999764321
Q ss_pred CC-CCCh------hhhHHHHHHHHhhcCCccEEEEEccceeecCCC-----CccccCCC--CCCCCChhHHHHHHHHHHH
Q 017914 135 EG-TGDP------MLKHGELLRSTLMNGHLQWLGYLSSTGVYGHSG-----GAWVDEDY--PANPTTELGRLRLSAEKGW 200 (364)
Q Consensus 135 ~~-~~~~------~~~~~~~l~~a~~~~~~~r~v~~Ss~~vy~~~~-----~~~~~E~~--~~~~~~~Y~~sK~~~E~~~ 200 (364)
.. ..+. ......++++++++.++++|||+||.++|+... ..+++|++ +..|.+.|+.+|.++|.++
T Consensus 108 ~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~~~V~~SS~~v~~~~~~~~~~~~~~~E~~~~~~~~~~~Y~~sK~~~E~~~ 187 (379)
T 2c5a_A 108 GFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYASSACIYPEFKQLETTNVSLKESDAWPAEPQDAFGLEKLATEELC 187 (379)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEGGGSCGGGSSSSSSCEECGGGGSSBCCSSHHHHHHHHHHHHH
T ss_pred cccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEeehheeCCCCCCCccCCCcCcccCCCCCCCChhHHHHHHHHHHH
Confidence 00 1111 223456888888888899999999999998542 23577776 6678899999999999999
Q ss_pred HHhhhhcCCcEEEEEecceecCCCC-------hHHHHHHhcCccc--ccccccCCcccccccHHHHHHHHHHHccCCCCC
Q 017914 201 LNLGRDLGISAQVFRLGGIYGPGRS-------SVDTIIKQLPLSE--GQKMRRARQYTSRIHVDDICQVLSASIDKPSAW 271 (364)
Q Consensus 201 ~~~~~~~~~~~~ilRp~~v~g~~~~-------~~~~~~~~~~~~~--~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~~g 271 (364)
+.++++.+++++++||+.+||+... .+..++....... ....+.+.+.++|+|++|+|++++.+++++ .+
T Consensus 188 ~~~~~~~gi~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva~ai~~~l~~~-~~ 266 (379)
T 2c5a_A 188 KHYNKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQTRSFTFIDECVEGVLRLTKSD-FR 266 (379)
T ss_dssp HHHHHHHCCEEEEEEECCEECTTSCCSSSCCCHHHHHHHHHHHCSSCEEEESCSCCEECCEEHHHHHHHHHHHHHSS-CC
T ss_pred HHHHHHHCCCEEEEEeCceeCcCCCcccccccHHHHHHHHHHhCCCceEEeCCCCeeEEEEEHHHHHHHHHHHhhcc-CC
Confidence 9998888999999999999998743 3333333211011 123456778899999999999999999876 56
Q ss_pred ceEEEeCCCCCCHHHHHHHHHHHhcCCCCCcccCCCCCCCCCCCccCCCCCCCeEEEchhHHHhcCcccCCCCHHHHHHH
Q 017914 272 NVYNVVDDDPAPREEVFAYAWDLVEKKWPGLLKHRKPRENTESSNEKGSSRGEKRVSNVRMKKELGVRLWHPSYKSGLQS 351 (364)
Q Consensus 272 ~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~e~l~~ 351 (364)
++||+++++.+|+.|+++.+.+.+|.+.+. ...+. + .......+|++|++++|||+|++ +++|+|++
T Consensus 267 ~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~-~~~p~-------~----~~~~~~~~d~~k~~~~lG~~p~~-~l~e~l~~ 333 (379)
T 2c5a_A 267 EPVNIGSDEMVSMNEMAEMVLSFEEKKLPI-HHIPG-------P----EGVRGRNSDNNLIKEKLGWAPNM-RLKEGLRI 333 (379)
T ss_dssp SCEEECCCCCEEHHHHHHHHHHTTTCCCCE-EEECC-------C----CCCSBCEECCHHHHHHHSCCCCC-CHHHHHHH
T ss_pred CeEEeCCCCccCHHHHHHHHHHHhCCCCce-eeCCC-------C----CCcccccCCHHHHHHHhCCCCCC-CHHHHHHH
Confidence 799999999999999999999999987432 11110 0 01234678999999999999999 79999999
Q ss_pred HHHHhcccC
Q 017914 352 IINQMDQPY 360 (364)
Q Consensus 352 ~~~~~~~~~ 360 (364)
+++|++++.
T Consensus 334 ~~~~~~~~~ 342 (379)
T 2c5a_A 334 TYFWIKEQI 342 (379)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHhH
Confidence 999998764
|
| >2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.1e-41 Score=309.84 Aligned_cols=291 Identities=14% Similarity=0.115 Sum_probs=217.7
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCC-CEEEEEEeCchhh-hhhh-hCCceEEEccCChhhH--HhhccCceeeEEEEe
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQG-WVVSGTCTNVMKK-KELE-QSGFDVHLFNANETAL--MILTTLKNYTHLLVS 130 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g-~~V~~~~r~~~~~-~~l~-~~~~~~~~~D~~~~~~--~~~~~~d~v~~~~~~ 130 (364)
..+|+||||| +||||++|+++|+++| ++|++++|+.... ..+. ..+++++.+|++|++. .+++++|+|+|+++.
T Consensus 30 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~l~~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vih~A~~ 109 (377)
T 2q1s_A 30 LANTNVMVVGGAGFVGSNLVKRLLELGVNQVHVVDNLLSAEKINVPDHPAVRFSETSITDDALLASLQDEYDYVFHLATY 109 (377)
T ss_dssp GTTCEEEEETTTSHHHHHHHHHHHHTTCSEEEEECCCTTCCGGGSCCCTTEEEECSCTTCHHHHHHCCSCCSEEEECCCC
T ss_pred hCCCEEEEECCccHHHHHHHHHHHHcCCceEEEEECCCCCchhhccCCCceEEEECCCCCHHHHHHHhhCCCEEEECCCc
Confidence 4568999999 9999999999999999 9999999976543 2222 3578899999999774 567899999999975
Q ss_pred cCCCCCCCC------hhhhHHHHHHHHhhcC-CccEEEEEccceeecCCCCcccc--CCC---CC-CCCChhHHHHHHHH
Q 017914 131 IPPLEGTGD------PMLKHGELLRSTLMNG-HLQWLGYLSSTGVYGHSGGAWVD--EDY---PA-NPTTELGRLRLSAE 197 (364)
Q Consensus 131 ~~~~~~~~~------~~~~~~~~l~~a~~~~-~~~r~v~~Ss~~vy~~~~~~~~~--E~~---~~-~~~~~Y~~sK~~~E 197 (364)
........+ .......++++++++. ++++|||+||.++|+.....+++ |+. +. .|.++|+.+|.++|
T Consensus 110 ~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~V~~SS~~vyg~~~~~~~~~~E~~~~~~~~~~~~~Y~~sK~~~E 189 (377)
T 2q1s_A 110 HGNQSSIHDPLADHENNTLTTLKLYERLKHFKRLKKVVYSAAGCSIAEKTFDDAKATEETDIVSLHNNDSPYSMSKIFGE 189 (377)
T ss_dssp SCHHHHHHCHHHHHHHHTHHHHHHHHHHTTCSSCCEEEEEEEC--------------CCCCCCCSSCCCSHHHHHHHHHH
T ss_pred cCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeCCHHHcCCCCCCCcCcccccccccccCCCCchHHHHHHHH
Confidence 432100111 1234467888888888 89999999999999987666788 887 66 78899999999999
Q ss_pred HHHHHhhhhcCCcEEEEEecceecCCC---------C-------hHHHHHHhcCccc-ccccccCCcccccccHHHHHHH
Q 017914 198 KGWLNLGRDLGISAQVFRLGGIYGPGR---------S-------SVDTIIKQLPLSE-GQKMRRARQYTSRIHVDDICQV 260 (364)
Q Consensus 198 ~~~~~~~~~~~~~~~ilRp~~v~g~~~---------~-------~~~~~~~~~~~~~-~~~~~~~~~~~~~i~v~Dva~~ 260 (364)
.+++.++++.+++++++||+.+||+.. . .+..++....... ....+.+++.++|+|++|+|++
T Consensus 190 ~~~~~~~~~~gi~~~ilRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~g~~~~~~i~v~Dva~a 269 (377)
T 2q1s_A 190 FYSVYYHKQHQLPTVRARFQNVYGPGEILGAGRWRGTPATVWRNVTPTFIYKALKGMPLPLENGGVATRDFIFVEDVANG 269 (377)
T ss_dssp HHHHHHHHHHCCCEEEEEECCEECTTCCTTCSSCCSSGGGTSCSHHHHHHHHHHTTCCCCCSGGGCCEECCEEHHHHHHH
T ss_pred HHHHHHHHHhCCCEEEEeeccEECCCCcccccccccCcccccccHHHHHHHHHHcCCCeEEeCCCCeEEeeEEHHHHHHH
Confidence 999999877899999999999999876 2 2333333211111 1234567789999999999999
Q ss_pred -HHHHccCCCCCceEEEeCCCCCCHHHHHHHHHHHhcCCCCCcccCCCCCCCCCCCccCCCCCC-CeEEEchhHHHhcCc
Q 017914 261 -LSASIDKPSAWNVYNVVDDDPAPREEVFAYAWDLVEKKWPGLLKHRKPRENTESSNEKGSSRG-EKRVSNVRMKKELGV 338 (364)
Q Consensus 261 -~~~~l~~~~~g~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~d~~k~~~~lG~ 338 (364)
++.+++++..| +||+++++.+|+.|+++.+.+.+|.+.+.. ..+ ..+ .... ...+|++|++++|||
T Consensus 270 ~i~~~~~~~~~g-~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~-~~p------~~~----~~~~~~~~~d~~k~~~~lG~ 337 (377)
T 2q1s_A 270 LIACAADGTPGG-VYNIASGKETSIADLATKINEITGNNTELD-RLP------KRP----WDNSGKRFGSPEKARRELGF 337 (377)
T ss_dssp HHHHHHHCCTTE-EEECCCCCCEEHHHHHHHHHHHHTCCSCCC-CCC------CCG----GGCC-CCCCCCHHHHHHHCC
T ss_pred HHHHHHhcCCCC-eEEecCCCceeHHHHHHHHHHHhCCCCCce-eCC------CCc----cccccccccCHHHHHHHcCC
Confidence 99999887667 999999999999999999999999874321 110 001 1122 577899999999999
Q ss_pred ccCCCCHHHHHHHHHHHhcccC
Q 017914 339 RLWHPSYKSGLQSIINQMDQPY 360 (364)
Q Consensus 339 ~p~~~~~~e~l~~~~~~~~~~~ 360 (364)
+|++ +++|+|+++++|++++.
T Consensus 338 ~p~~-~l~e~l~~~~~~~~~~~ 358 (377)
T 2q1s_A 338 SADV-SIDDGLRKTIEWTKANL 358 (377)
T ss_dssp CCCC-CHHHHHHHHHHHHHHTH
T ss_pred CCCC-CHHHHHHHHHHHHHHhh
Confidence 9999 79999999999998764
|
| >1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.6e-41 Score=303.78 Aligned_cols=289 Identities=15% Similarity=0.214 Sum_probs=224.1
Q ss_pred CeEEEEc-CChhhHHHHHHHHhC---C---CEEEEEEeCch--hhhhhh----hCCceEEEccCChhhH--HhhccCcee
Q 017914 60 NRMLILG-MGFVGRIFAEKIKNQ---G---WVVSGTCTNVM--KKKELE----QSGFDVHLFNANETAL--MILTTLKNY 124 (364)
Q Consensus 60 ~~vlVtG-tG~iG~~l~~~L~~~---g---~~V~~~~r~~~--~~~~l~----~~~~~~~~~D~~~~~~--~~~~~~d~v 124 (364)
|+||||| +||||++|+++|+++ | ++|++++|... ....+. ..+++++.+|++|++. .++.++|+|
T Consensus 1 M~vlVTGatG~iG~~l~~~L~~~~~~g~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~V 80 (337)
T 1r6d_A 1 MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFVHGDIRDAGLLARELRGVDAI 80 (337)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGGGGGTTCTTEEEEECCTTCHHHHHHHTTTCCEE
T ss_pred CeEEEECCccHHHHHHHHHHHhhhcCCCCceEEEEEECCCccCchhhhhhcccCCCeEEEEcCCCCHHHHHHHhcCCCEE
Confidence 6899999 999999999999997 8 99999999642 112221 2468899999999774 666899999
Q ss_pred eEEEEecCCCCCCC------ChhhhHHHHHHHHhhcCCccEEEEEccceeecCCCCccccCCCCCCCCChhHHHHHHHHH
Q 017914 125 THLLVSIPPLEGTG------DPMLKHGELLRSTLMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANPTTELGRLRLSAEK 198 (364)
Q Consensus 125 ~~~~~~~~~~~~~~------~~~~~~~~~l~~a~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~~sK~~~E~ 198 (364)
+|+++......... +.+.....++++++...++++|||+||.++||.....+++|+.+..|.+.|+.+|.++|.
T Consensus 81 ih~A~~~~~~~~~~~~~~~~~~Nv~~~~~l~~a~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~~~~~Y~~sK~~~e~ 160 (337)
T 1r6d_A 81 VHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAGVGRVVHVSTNQVYGSIDSGSWTESSPLEPNSPYAASKAGSDL 160 (337)
T ss_dssp EECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEEGGGGCCCSSSCBCTTSCCCCCSHHHHHHHHHHH
T ss_pred EECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEecchHHhCCCCCCCCCCCCCCCCCCchHHHHHHHHH
Confidence 99997543110001 122345678888888888999999999999997766789999998899999999999999
Q ss_pred HHHHhhhhcCCcEEEEEecceecCCCC---hHHHHHHhcCccc-ccccccCCcccccccHHHHHHHHHHHccCCCCCceE
Q 017914 199 GWLNLGRDLGISAQVFRLGGIYGPGRS---SVDTIIKQLPLSE-GQKMRRARQYTSRIHVDDICQVLSASIDKPSAWNVY 274 (364)
Q Consensus 199 ~~~~~~~~~~~~~~ilRp~~v~g~~~~---~~~~~~~~~~~~~-~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~~g~~~ 274 (364)
+++.++++.+++++++||+.+||+... ++..++....... ....+.+.+.++|+|++|+|++++.+++++..|++|
T Consensus 161 ~~~~~~~~~g~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~~g~~~ 240 (337)
T 1r6d_A 161 VARAYHRTYGLDVRITRCCNNYGPYQHPEKLIPLFVTNLLDGGTLPLYGDGANVREWVHTDDHCRGIALVLAGGRAGEIY 240 (337)
T ss_dssp HHHHHHHHHCCCEEEEEECEEECTTCCTTSHHHHHHHHHHTTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHHCCTTCEE
T ss_pred HHHHHHHHHCCCEEEEEeeeeECCCCCCCChHHHHHHHHhcCCCcEEeCCCCeeEeeEeHHHHHHHHHHHHhCCCCCCEE
Confidence 999998888999999999999999753 3333333211111 112356778899999999999999999877678899
Q ss_pred EEeCCCCCCHHHHHHHHHHHhcCCCCCcccCCCCCCCCCCCccCCCCCCCeEEEchhHHHhcCcccCCCCHHHHHHHHHH
Q 017914 275 NVVDDDPAPREEVFAYAWDLVEKKWPGLLKHRKPRENTESSNEKGSSRGEKRVSNVRMKKELGVRLWHPSYKSGLQSIIN 354 (364)
Q Consensus 275 ~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~e~l~~~~~ 354 (364)
|+++++.+|+.|+++.+.+.+|.+.+. +.+.. . .........+|++|++++|||+|++ +++|+|+++++
T Consensus 241 ~v~~~~~~s~~e~~~~i~~~~g~~~~~-~~~~~-----~----~~~~~~~~~~d~~k~~~~lG~~p~~-~~~e~l~~~~~ 309 (337)
T 1r6d_A 241 HIGGGLELTNRELTGILLDSLGADWSS-VRKVA-----D----RKGHDLRYSLDGGKIERELGYRPQV-SFADGLARTVR 309 (337)
T ss_dssp EECCCCEEEHHHHHHHHHHHHTCCGGG-EEEEC-----C----CTTCCCBCCBCCHHHHHHHCCCCCS-CHHHHHHHHHH
T ss_pred EeCCCCCccHHHHHHHHHHHhCCCccc-ceecC-----C----CCCCcceeecCHHHHHHHcCCCCCC-CHHHHHHHHHH
Confidence 999999999999999999999986331 11100 0 0011223468999999999999999 69999999999
Q ss_pred Hhccc
Q 017914 355 QMDQP 359 (364)
Q Consensus 355 ~~~~~ 359 (364)
|++++
T Consensus 310 ~~~~~ 314 (337)
T 1r6d_A 310 WYREN 314 (337)
T ss_dssp HHHHC
T ss_pred HHHhc
Confidence 99865
|
| >1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.9e-41 Score=304.70 Aligned_cols=290 Identities=14% Similarity=0.163 Sum_probs=222.8
Q ss_pred CCeEEEEc-CChhhHHHHHHHHhC--CCEEEEEEeCchh-----hhhhhhCCceEEEccCChhhH--HhhccCceeeEEE
Q 017914 59 PNRMLILG-MGFVGRIFAEKIKNQ--GWVVSGTCTNVMK-----KKELEQSGFDVHLFNANETAL--MILTTLKNYTHLL 128 (364)
Q Consensus 59 ~~~vlVtG-tG~iG~~l~~~L~~~--g~~V~~~~r~~~~-----~~~l~~~~~~~~~~D~~~~~~--~~~~~~d~v~~~~ 128 (364)
||+||||| +||||++|+++|+++ |++|++++|+... ...+...++.++.+|++|.+. .+++++|+|+|++
T Consensus 4 m~~vlVTGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih~A 83 (348)
T 1oc2_A 4 FKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAILGDRVELVVGDIADAELVDKLAAKADAIVHYA 83 (348)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGGGCSSSEEEEECCTTCHHHHHHHHTTCSEEEECC
T ss_pred CcEEEEeCCccHHHHHHHHHHHHhCCCCEEEEEeCCCCCCChhHHhhhccCCeEEEECCCCCHHHHHHHhhcCCEEEECC
Confidence 57999999 999999999999998 8999999996521 122223578899999999774 6778899999999
Q ss_pred EecCCCCCCC------ChhhhHHHHHHHHhhcCCccEEEEEccceeecCCCC------------ccccCCCCCCCCChhH
Q 017914 129 VSIPPLEGTG------DPMLKHGELLRSTLMNGHLQWLGYLSSTGVYGHSGG------------AWVDEDYPANPTTELG 190 (364)
Q Consensus 129 ~~~~~~~~~~------~~~~~~~~~l~~a~~~~~~~r~v~~Ss~~vy~~~~~------------~~~~E~~~~~~~~~Y~ 190 (364)
+......... +.......++++++...++ +|||+||.++||.... .+++|+++..+.+.|+
T Consensus 84 ~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~-~~v~~SS~~vyg~~~~~~~~~~~~~~~~~~~~E~~~~~~~~~Y~ 162 (348)
T 1oc2_A 84 AESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYDI-RFHHVSTDEVYGDLPLREDLPGHGEGPGEKFTAETNYNPSSPYS 162 (348)
T ss_dssp SCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHHTC-EEEEEEEGGGGCCBCCGGGSTTTTCSTTSSBCTTSCCCCCSHHH
T ss_pred cccCccchhhCHHHHHHHHHHHHHHHHHHHHHhCC-eEEEecccceeCCCcccccccccccccCCCcCCCCCCCCCCccH
Confidence 7543110001 1223445688888887777 9999999999986532 5789999988999999
Q ss_pred HHHHHHHHHHHHhhhhcCCcEEEEEecceecCCCC---hHHHHHHhcCcc-cccccccCCcccccccHHHHHHHHHHHcc
Q 017914 191 RLRLSAEKGWLNLGRDLGISAQVFRLGGIYGPGRS---SVDTIIKQLPLS-EGQKMRRARQYTSRIHVDDICQVLSASID 266 (364)
Q Consensus 191 ~sK~~~E~~~~~~~~~~~~~~~ilRp~~v~g~~~~---~~~~~~~~~~~~-~~~~~~~~~~~~~~i~v~Dva~~~~~~l~ 266 (364)
.+|..+|.+++.++.+.+++++++||+.+||+... .+..+....... .....+.+.+.++|+|++|+|++++.+++
T Consensus 163 ~sK~~~e~~~~~~~~~~gi~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~ 242 (348)
T 1oc2_A 163 STKAASDLIVKAWVRSFGVKATISNCSNNYGPYQHIEKFIPRQITNILAGIKPKLYGEGKNVRDWIHTNDHSTGVWAILT 242 (348)
T ss_dssp HHHHHHHHHHHHHHHHHCCEEEEEEECCEESTTCCTTSHHHHHHHHHHHTCCCEEETTSCCEEECEEHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhCCCEEEEeeceeeCCCCCccchHHHHHHHHHcCCCceEecCCCceEeeEEHHHHHHHHHHHhh
Confidence 99999999999998888999999999999999753 333333221101 11123566788999999999999999998
Q ss_pred CCCCCceEEEeCCCCCCHHHHHHHHHHHhcCCCCCcccCCCCCCCCCCCccCCCCCCCeEEEchhHHHhcCcccCCCCHH
Q 017914 267 KPSAWNVYNVVDDDPAPREEVFAYAWDLVEKKWPGLLKHRKPRENTESSNEKGSSRGEKRVSNVRMKKELGVRLWHPSYK 346 (364)
Q Consensus 267 ~~~~g~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~ 346 (364)
++..|++||+++++.+++.|+++.+.+.+|.+.+.. .+. .. .........+|++|++++|||+|++++++
T Consensus 243 ~~~~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~-~~~-----~~----~~~~~~~~~~d~~k~~~~lG~~p~~~~~~ 312 (348)
T 1oc2_A 243 KGRMGETYLIGADGEKNNKEVLELILEKMGQPKDAY-DHV-----TD----RAGHDLRYAIDASKLRDELGWTPQFTDFS 312 (348)
T ss_dssp HCCTTCEEEECCSCEEEHHHHHHHHHHHTTCCTTCS-EEE-----CC----CTTCCCBCCBCCHHHHHHHCCCCSCCCHH
T ss_pred CCCCCCeEEeCCCCCCCHHHHHHHHHHHhCCCcccc-ccC-----CC----CCCcccccccCHHHHHHHcCCCCCCCcHH
Confidence 776789999999999999999999999999874321 110 00 01112345689999999999999994499
Q ss_pred HHHHHHHHHhccc
Q 017914 347 SGLQSIINQMDQP 359 (364)
Q Consensus 347 e~l~~~~~~~~~~ 359 (364)
|+|+++++|++++
T Consensus 313 ~~l~~~~~~~~~~ 325 (348)
T 1oc2_A 313 EGLEETIQWYTDN 325 (348)
T ss_dssp HHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHh
Confidence 9999999999875
|
| >2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-40 Score=302.46 Aligned_cols=290 Identities=15% Similarity=0.186 Sum_probs=220.3
Q ss_pred CCeEEEEc-CChhhHHHHHHHHhCC--CEEEEEEeCch--hhhhhh----hCCceEEEccCChhhH--HhhccCceeeEE
Q 017914 59 PNRMLILG-MGFVGRIFAEKIKNQG--WVVSGTCTNVM--KKKELE----QSGFDVHLFNANETAL--MILTTLKNYTHL 127 (364)
Q Consensus 59 ~~~vlVtG-tG~iG~~l~~~L~~~g--~~V~~~~r~~~--~~~~l~----~~~~~~~~~D~~~~~~--~~~~~~d~v~~~ 127 (364)
+|+||||| +||||++|+++|+++| ++|++++|... ....+. ..++.++.+|++|.+. .++.++|+|+|+
T Consensus 3 ~m~vlVTGatG~iG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih~ 82 (336)
T 2hun_A 3 SMKLLVTGGMGFIGSNFIRYILEKHPDWEVINIDKLGYGSNPANLKDLEDDPRYTFVKGDVADYELVKELVRKVDGVVHL 82 (336)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHTCSEEEEC
T ss_pred CCeEEEECCCchHHHHHHHHHHHhCCCCEEEEEecCcccCchhHHhhhccCCceEEEEcCCCCHHHHHHHhhCCCEEEEC
Confidence 47899999 9999999999999986 99999999642 222221 2468899999999764 566889999999
Q ss_pred EEecCCCCCCCC------hhhhHHHHHHHHhhcCCc-cEEEEEccceeecCCCCccccCCCCCCCCChhHHHHHHHHHHH
Q 017914 128 LVSIPPLEGTGD------PMLKHGELLRSTLMNGHL-QWLGYLSSTGVYGHSGGAWVDEDYPANPTTELGRLRLSAEKGW 200 (364)
Q Consensus 128 ~~~~~~~~~~~~------~~~~~~~~l~~a~~~~~~-~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~~sK~~~E~~~ 200 (364)
++.........+ .+.....++++++...+. ++|||+||.++||.....+++|+.+..+.+.|+.+|.++|.++
T Consensus 83 A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~vyg~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~ 162 (336)
T 2hun_A 83 AAESHVDRSISSPEIFLHSNVIGTYTLLESIRRENPEVRFVHVSTDEVYGDILKGSFTENDRLMPSSPYSATKAASDMLV 162 (336)
T ss_dssp CCCCCHHHHHHCTHHHHHHHHHHHHHHHHHHHHHCTTSEEEEEEEGGGGCCCSSSCBCTTBCCCCCSHHHHHHHHHHHHH
T ss_pred CCCcChhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEeccHHHHCCCCCCCcCCCCCCCCCCccHHHHHHHHHHH
Confidence 975431100011 122345677777776554 7999999999999776678999999889999999999999999
Q ss_pred HHhhhhcCCcEEEEEecceecCCCC---hHHHHHHhcCcc-cccccccCCcccccccHHHHHHHHHHHccCCCCCceEEE
Q 017914 201 LNLGRDLGISAQVFRLGGIYGPGRS---SVDTIIKQLPLS-EGQKMRRARQYTSRIHVDDICQVLSASIDKPSAWNVYNV 276 (364)
Q Consensus 201 ~~~~~~~~~~~~ilRp~~v~g~~~~---~~~~~~~~~~~~-~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~~g~~~~i 276 (364)
+.++.+.+++++++||+.+||+... .+..++...... .....+.+.+.++|+|++|+|++++.+++++..|++||+
T Consensus 163 ~~~~~~~~~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~g~~~~v 242 (336)
T 2hun_A 163 LGWTRTYNLNASITRCTNNYGPYQFPEKLIPKTIIRASLGLKIPIYGTGKNVRDWLYVEDHVRAIELVLLKGESREIYNI 242 (336)
T ss_dssp HHHHHHTTCEEEEEEECEEESTTCCTTSHHHHHHHHHHTTCCEEEETC---CEEEEEHHHHHHHHHHHHHHCCTTCEEEE
T ss_pred HHHHHHhCCCEEEEeeeeeeCcCCCcCchHHHHHHHHHcCCCceEeCCCCceeeeEEHHHHHHHHHHHHhCCCCCCEEEe
Confidence 9998888999999999999999752 333333321111 112235677889999999999999999987777899999
Q ss_pred eCCCCCCHHHHHHHHHHHhcCCCCCcccCCCCCCCCCCCccCCCCCCCeEEEchhHHHhcCcccCCCCHHHHHHHHHHHh
Q 017914 277 VDDDPAPREEVFAYAWDLVEKKWPGLLKHRKPRENTESSNEKGSSRGEKRVSNVRMKKELGVRLWHPSYKSGLQSIINQM 356 (364)
Q Consensus 277 ~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~e~l~~~~~~~ 356 (364)
++++.+|+.|+++.+.+.+|.+.+.. .... . .........+|++|++++|||+|++ +++|+|+++++|+
T Consensus 243 ~~~~~~s~~e~~~~i~~~~g~~~~~~-~~~~-----~----~~~~~~~~~~d~~k~~~~lG~~p~~-~~~~~l~~~~~~~ 311 (336)
T 2hun_A 243 SAGEEKTNLEVVKIILRLMGKGEELI-ELVE-----D----RPGHDLRYSLDSWKITRDLKWRPKY-TFDEGIKKTIDWY 311 (336)
T ss_dssp CCSCEECHHHHHHHHHHHTTCCSTTE-EEEC-----C----CTTCCCCCCBCCHHHHHHHCCCCSS-CHHHHHHHHHHHH
T ss_pred CCCCcccHHHHHHHHHHHhCCCcccc-cccC-----C----CCCchhhhcCCHHHHHHHhCCCCCC-CHHHHHHHHHHHH
Confidence 99999999999999999999874321 1100 0 0111234568999999999999999 7999999999999
Q ss_pred ccc
Q 017914 357 DQP 359 (364)
Q Consensus 357 ~~~ 359 (364)
+++
T Consensus 312 ~~~ 314 (336)
T 2hun_A 312 LKN 314 (336)
T ss_dssp HHT
T ss_pred HhC
Confidence 865
|
| >1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=7e-41 Score=304.12 Aligned_cols=297 Identities=13% Similarity=0.093 Sum_probs=224.5
Q ss_pred CCCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhh-----hhh-hhCCceEEEccCChhhH--Hhhcc--Ccee
Q 017914 56 WQSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKK-----KEL-EQSGFDVHLFNANETAL--MILTT--LKNY 124 (364)
Q Consensus 56 ~~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~-----~~l-~~~~~~~~~~D~~~~~~--~~~~~--~d~v 124 (364)
..++|+||||| +||||++|+++|+++|++|++++|+.... ..+ ...++.++.+|++|.+. ..+++ +|+|
T Consensus 11 ~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~V 90 (335)
T 1rpn_A 11 GSMTRSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMADACSVQRAVIKAQPQEV 90 (335)
T ss_dssp ----CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHTTCGGGEEEEECCTTCHHHHHHHHHHHCCSEE
T ss_pred cccCCeEEEECCCChHHHHHHHHHHHCCCeEEEEeCCCccccccchhhccccCceEEEECCCCCHHHHHHHHHHcCCCEE
Confidence 45678999999 99999999999999999999999976541 111 12468899999999764 55554 6999
Q ss_pred eEEEEecCCCCCCCCh------hhhHHHHHHHHhhcCCc-cEEEEEccceeecCCCCccccCCCCCCCCChhHHHHHHHH
Q 017914 125 THLLVSIPPLEGTGDP------MLKHGELLRSTLMNGHL-QWLGYLSSTGVYGHSGGAWVDEDYPANPTTELGRLRLSAE 197 (364)
Q Consensus 125 ~~~~~~~~~~~~~~~~------~~~~~~~l~~a~~~~~~-~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~~sK~~~E 197 (364)
+|+++.........++ ......++++++...++ ++|||+||.++|+.....+++|+++..|.+.|+.+|.++|
T Consensus 91 ih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~SS~~v~g~~~~~~~~E~~~~~p~~~Y~~sK~~~e 170 (335)
T 1rpn_A 91 YNLAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRFYQASTSEMFGLIQAERQDENTPFYPRSPYGVAKLYGH 170 (335)
T ss_dssp EECCSCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTSEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHHHHHHHHH
T ss_pred EECccccchhhhhhChHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeCHHHhCCCCCCCCCcccCCCCCChhHHHHHHHH
Confidence 9999754321111222 22345678888887776 8999999999999877778999999999999999999999
Q ss_pred HHHHHhhhhcCCcEEEEEecceecCCCC--h----HHHHHHhcCcc--cccccccCCcccccccHHHHHHHHHHHccCCC
Q 017914 198 KGWLNLGRDLGISAQVFRLGGIYGPGRS--S----VDTIIKQLPLS--EGQKMRRARQYTSRIHVDDICQVLSASIDKPS 269 (364)
Q Consensus 198 ~~~~~~~~~~~~~~~ilRp~~v~g~~~~--~----~~~~~~~~~~~--~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~ 269 (364)
.+++.++++.+++++++||+.+||++.. + +..++...... .....+.+++.++|+|++|+|++++.+++++.
T Consensus 171 ~~~~~~~~~~~~~~~i~r~~~v~Gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~g~~~~~~i~v~Dva~a~~~~~~~~~ 250 (335)
T 1rpn_A 171 WITVNYRESFGLHASSGILFNHESPLRGIEFVTRKVTDAVARIKLGKQQELRLGNVDAKRDWGFAGDYVEAMWLMLQQDK 250 (335)
T ss_dssp HHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEEECEEHHHHHHHHHHHHHSSS
T ss_pred HHHHHHHHHcCCcEEEEeeCcccCCCCCCCcchHHHHHHHHHHHcCCCceEEeCCCcceeceEEHHHHHHHHHHHHhcCC
Confidence 9999998888999999999999998743 2 22222221111 11134667889999999999999999998765
Q ss_pred CCceEEEeCCCCCCHHHHHHHHHHHhcCCCCCcccCCCCCCCCCCCccCCCCCCCeEEEchhHHHhcCcccCCCCHHHHH
Q 017914 270 AWNVYNVVDDDPAPREEVFAYAWDLVEKKWPGLLKHRKPRENTESSNEKGSSRGEKRVSNVRMKKELGVRLWHPSYKSGL 349 (364)
Q Consensus 270 ~g~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~e~l 349 (364)
+++||+++++.+|+.|+++.+.+.+|.+.+..+... . ............+|++|++++|||+|++ +++|+|
T Consensus 251 -~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~------~-~~~~~~~~~~~~~d~~k~~~~lG~~p~~-~l~e~l 321 (335)
T 1rpn_A 251 -ADDYVVATGVTTTVRDMCQIAFEHVGLDYRDFLKID------P-AFFRPAEVDVLLGNPAKAQRVLGWKPRT-SLDELI 321 (335)
T ss_dssp -CCCEEECCSCEEEHHHHHHHHHHTTTCCGGGTEEEC------G-GGCCSSCCCBCCBCTHHHHHHHCCCCCS-CHHHHH
T ss_pred -CCEEEEeCCCCccHHHHHHHHHHHhCCCcccccccc------c-cccCCCcchhhcCCHHHHHHhcCCCcCC-CHHHHH
Confidence 479999999999999999999999998632111110 0 0001112334668999999999999999 899999
Q ss_pred HHHHHHhcccCC
Q 017914 350 QSIINQMDQPYQ 361 (364)
Q Consensus 350 ~~~~~~~~~~~~ 361 (364)
+++++|++++..
T Consensus 322 ~~~~~~~~~~~~ 333 (335)
T 1rpn_A 322 RMMVEADLRRVS 333 (335)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHhhc
Confidence 999999988653
|
| >2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.2e-41 Score=301.33 Aligned_cols=284 Identities=17% Similarity=0.234 Sum_probs=218.1
Q ss_pred CeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchh-hhhhhhCCceEEEccCChhhH--Hhhc--cCceeeEEEEecCC
Q 017914 60 NRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMK-KKELEQSGFDVHLFNANETAL--MILT--TLKNYTHLLVSIPP 133 (364)
Q Consensus 60 ~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~-~~~l~~~~~~~~~~D~~~~~~--~~~~--~~d~v~~~~~~~~~ 133 (364)
|+||||| +||||++++++|+++|++|++++|.... ...+. .++.++.+|++|++. ..++ ++|.|+|+++....
T Consensus 1 m~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~-~~~~~~~~Dl~~~~~~~~~~~~~~~d~vi~~a~~~~~ 79 (311)
T 2p5y_A 1 MRVLVTGGAGFIGSHIVEDLLARGLEVAVLDNLATGKRENVP-KGVPFFRVDLRDKEGVERAFREFRPTHVSHQAAQASV 79 (311)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTTCEEEEECCCSSCCGGGSC-TTCCEECCCTTCHHHHHHHHHHHCCSEEEECCSCCCH
T ss_pred CEEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCCcCchhhcc-cCeEEEECCCCCHHHHHHHHHhcCCCEEEECccccCc
Confidence 5899999 9999999999999999999999985432 22222 467889999999764 5555 79999999875332
Q ss_pred CCCCCCh------hhhHHHHHHHHhhcCCccEEEEEccc-eeecC-CCCccccCCCCCCCCChhHHHHHHHHHHHHHhhh
Q 017914 134 LEGTGDP------MLKHGELLRSTLMNGHLQWLGYLSST-GVYGH-SGGAWVDEDYPANPTTELGRLRLSAEKGWLNLGR 205 (364)
Q Consensus 134 ~~~~~~~------~~~~~~~l~~a~~~~~~~r~v~~Ss~-~vy~~-~~~~~~~E~~~~~~~~~Y~~sK~~~E~~~~~~~~ 205 (364)
.....++ +.....++++++.+.++++|||+||. .+|+. ....+++|+.+..|.+.|+.+|.++|.+++.+++
T Consensus 80 ~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iv~~SS~~~~~g~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~ 159 (311)
T 2p5y_A 80 KVSVEDPVLDFEVNLLGGLNLLEACRQYGVEKLVFASTGGAIYGEVPEGERAEETWPPRPKSPYAASKAAFEHYLSVYGQ 159 (311)
T ss_dssp HHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEHHHHHCCCCTTCCBCTTSCCCCCSHHHHHHHHHHHHHHHHHH
T ss_pred hhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeCCChhhcCCCCCCCCcCCCCCCCCCChHHHHHHHHHHHHHHHHH
Confidence 1111111 22345678888888889999999998 89986 5556789999888999999999999999999988
Q ss_pred hcCCcEEEEEecceecCCCC------hHHHHHH----hcCcccc--cccccCCcccccccHHHHHHHHHHHccCCCCCce
Q 017914 206 DLGISAQVFRLGGIYGPGRS------SVDTIIK----QLPLSEG--QKMRRARQYTSRIHVDDICQVLSASIDKPSAWNV 273 (364)
Q Consensus 206 ~~~~~~~ilRp~~v~g~~~~------~~~~~~~----~~~~~~~--~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~~g~~ 273 (364)
+.+++++++||+++||++.. .+..++. ....... ...+.+.+.++|+|++|+|++++.+++++ |++
T Consensus 160 ~~~~~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~--~~~ 237 (311)
T 2p5y_A 160 SYGLKWVSLRYGNVYGPRQDPHGEAGVVAIFAERVLKGLPVTLYARKTPGDEGCVRDYVYVGDVAEAHALALFSL--EGI 237 (311)
T ss_dssp HHCCCEEEEEECEEECTTCCSSSTTHHHHHHHHHHHHTCCEEEECSSSTTSCCCEECEEEHHHHHHHHHHHHHHC--CEE
T ss_pred HcCCCEEEEeeccccCcCCCCCCcCcHHHHHHHHHHcCCCcEEEecccCCCCCeEEeeEEHHHHHHHHHHHHhCC--CCE
Confidence 88999999999999998743 2333332 2211100 00156678899999999999999999875 789
Q ss_pred EEEeCCCCCCHHHHHHHHHHHhcCCCCCcccCCCCCCCCCCCccCCCCCCCeEEEchhHHHhcCcccCCCCHHHHHHHHH
Q 017914 274 YNVVDDDPAPREEVFAYAWDLVEKKWPGLLKHRKPRENTESSNEKGSSRGEKRVSNVRMKKELGVRLWHPSYKSGLQSII 353 (364)
Q Consensus 274 ~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~e~l~~~~ 353 (364)
||+++++.+|++|+++.+.+.+|.+.+.. ..+ . .........+|++|+++ |||+|++ +++|+|++++
T Consensus 238 ~~i~~~~~~s~~e~~~~i~~~~g~~~~~~-~~~------~----~~~~~~~~~~d~~k~~~-lg~~p~~-~~~~~l~~~~ 304 (311)
T 2p5y_A 238 YNVGTGEGHTTREVLMAVAEAAGKAPEVQ-PAP------P----RPGDLERSVLSPLKLMA-HGWRPKV-GFQEGIRLTV 304 (311)
T ss_dssp EEESCSCCEEHHHHHHHHHHHHTCCCCEE-EEC------C----CTTCCSBCCBCCHHHHT-TTCCCSS-CHHHHHHHHH
T ss_pred EEeCCCCCccHHHHHHHHHHHhCCCCCce-eCC------C----CccchhhccCCHHHHHH-CCCCCCC-CHHHHHHHHH
Confidence 99999999999999999999999874321 110 0 01122356789999998 9999999 8999999999
Q ss_pred HHhccc
Q 017914 354 NQMDQP 359 (364)
Q Consensus 354 ~~~~~~ 359 (364)
+|++++
T Consensus 305 ~~~~~~ 310 (311)
T 2p5y_A 305 DHFRGA 310 (311)
T ss_dssp HHHHTC
T ss_pred HHHHhh
Confidence 999874
|
| >1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-40 Score=308.59 Aligned_cols=292 Identities=14% Similarity=0.134 Sum_probs=223.2
Q ss_pred CCeEEEEc-CChhhHHHHHHHH-hCCCEEEEEEeCchh---------hhhhh-----------hCC---ceEEEccCChh
Q 017914 59 PNRMLILG-MGFVGRIFAEKIK-NQGWVVSGTCTNVMK---------KKELE-----------QSG---FDVHLFNANET 113 (364)
Q Consensus 59 ~~~vlVtG-tG~iG~~l~~~L~-~~g~~V~~~~r~~~~---------~~~l~-----------~~~---~~~~~~D~~~~ 113 (364)
+|+||||| +||||++|+++|+ ++|++|++++|+... ...+. ..+ +.++.+|++|+
T Consensus 2 ~m~vlVTGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~ 81 (397)
T 1gy8_A 2 HMRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNE 81 (397)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHhCCCEEEEEecCCcccccccccchHHHHHHHHHHhhccccccCCceEEEEECCCCCH
Confidence 47999999 9999999999999 999999999997543 22221 124 88999999997
Q ss_pred hH--Hhhc--c-CceeeEEEEecCCCCCCCC------hhhhHHHHHHHHhhcCCccEEEEEccceeecCCC-------Cc
Q 017914 114 AL--MILT--T-LKNYTHLLVSIPPLEGTGD------PMLKHGELLRSTLMNGHLQWLGYLSSTGVYGHSG-------GA 175 (364)
Q Consensus 114 ~~--~~~~--~-~d~v~~~~~~~~~~~~~~~------~~~~~~~~l~~a~~~~~~~r~v~~Ss~~vy~~~~-------~~ 175 (364)
+. .+++ + +|+|+|+++.........+ .......++++++++.++++|||+||.++|+... ..
T Consensus 82 ~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~~iv~~SS~~v~g~~~~~~~~~~~~ 161 (397)
T 1gy8_A 82 DFLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLHKCDKIIFSSSAAIFGNPTMGSVSTNAE 161 (397)
T ss_dssp HHHHHHHHHSCCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGTBSCCC-----CCC
T ss_pred HHHHHHHHhcCCCCEEEECCCccCcCcchhhHHHHHHHHhHHHHHHHHHHHHhCCCEEEEECCHHHhCCCCccccccccc
Confidence 74 4555 5 9999999975432111111 1234456788888888899999999999998765 56
Q ss_pred cccCCCCCCCCChhHHHHHHHHHHHHHhhhhcCCcEEEEEecceecCCC------------ChHHHHH-----HhcCcc-
Q 017914 176 WVDEDYPANPTTELGRLRLSAEKGWLNLGRDLGISAQVFRLGGIYGPGR------------SSVDTII-----KQLPLS- 237 (364)
Q Consensus 176 ~~~E~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilRp~~v~g~~~------------~~~~~~~-----~~~~~~- 237 (364)
+++|+++..|.+.|+.+|.++|.+++.++.+.+++++++||+++||++. .++..+. ....-.
T Consensus 162 ~~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~gi~~~ilRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (397)
T 1gy8_A 162 PIDINAKKSPESPYGESKLIAERMIRDCAEAYGIKGICLRYFNACGAHEDGDIGEHYQGSTHLIPIILGRVMSDIAPDQR 241 (397)
T ss_dssp CBCTTSCCBCSSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECCCTTSSCSCCSTTCCSHHHHHHHHHHHHHSCC--
T ss_pred CcCccCCCCCCCchHHHHHHHHHHHHHHHHHHCCcEEEEeccceeCCCccccccccccchhHHHHHHHHHHHHHHHhcCc
Confidence 7999999989999999999999999999888899999999999999852 2344333 211100
Q ss_pred -----------cccccc------cCCcccccccHHHHHHHHHHHccCCC-C-----C---ceEEEeCCCCCCHHHHHHHH
Q 017914 238 -----------EGQKMR------RARQYTSRIHVDDICQVLSASIDKPS-A-----W---NVYNVVDDDPAPREEVFAYA 291 (364)
Q Consensus 238 -----------~~~~~~------~~~~~~~~i~v~Dva~~~~~~l~~~~-~-----g---~~~~i~~~~~~s~~el~~~i 291 (364)
.....+ .+++.++|||++|+|++++.+++++. . + ++||+++++.+|+.|+++.+
T Consensus 242 ~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~v~v~Dva~a~~~~l~~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i 321 (397)
T 1gy8_A 242 LTIHEDASTDKRMPIFGTDYPTPDGTCVRDYVHVCDLASAHILALDYVEKLGPNDKSKYFSVFNLGTSRGYSVREVIEVA 321 (397)
T ss_dssp ---------CCCEEEECSCSSSTTSSCEECEEEHHHHHHHHHHHHHHHHTCCTTTGGGSEEEEEESCSCCEEHHHHHHHH
T ss_pred cccccccccCCCceeecCcccCCCCCeeEeeEeHHHHHHHHHHHHhcccccccccccCCCcEEEeCCCCcccHHHHHHHH
Confidence 011112 56788999999999999999997642 2 3 79999999999999999999
Q ss_pred HHHhcCCCCCcccCCCCCCCCCCCccCCCCCCCeEEEchhHHHhcCcccCCCCHHHHHHHHHHHhcccCC
Q 017914 292 WDLVEKKWPGLLKHRKPRENTESSNEKGSSRGEKRVSNVRMKKELGVRLWHPSYKSGLQSIINQMDQPYQ 361 (364)
Q Consensus 292 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~e~l~~~~~~~~~~~~ 361 (364)
.+.+|.+.+... .+ . .........+|++|++++|||+|++|+++|+|+++++|++++.+
T Consensus 322 ~~~~g~~~~~~~-~~------~----~~~~~~~~~~d~~k~~~~lG~~p~~~~l~e~l~~~~~~~~~~~~ 380 (397)
T 1gy8_A 322 RKTTGHPIPVRE-CG------R----REGDPAYLVAASDKAREVLGWKPKYDTLEAIMETSWKFQRTHPN 380 (397)
T ss_dssp HHHHCCCCCEEE-EC------C----CTTCCSEECBCCHHHHHHTCCCCSCCSHHHHHHHHHHHHHTCTT
T ss_pred HHHhCCCCCeee-CC------C----CCCcccccccCHHHHHHHhCCCCCcCCHHHHHHHHHHHHHhccc
Confidence 999998744211 10 0 11123356789999999999999997899999999999998754
|
| >1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-40 Score=303.44 Aligned_cols=292 Identities=14% Similarity=0.093 Sum_probs=221.5
Q ss_pred CCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchh----------hhhhh---hCCceEEEccCChhhH--Hhhc--
Q 017914 58 SPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMK----------KKELE---QSGFDVHLFNANETAL--MILT-- 119 (364)
Q Consensus 58 ~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~----------~~~l~---~~~~~~~~~D~~~~~~--~~~~-- 119 (364)
|+|+||||| +||||++|+++|+++|++|++++|+... ...+. ..++.++.+|++|.+. .+++
T Consensus 1 M~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 80 (348)
T 1ek6_A 1 MAEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKKY 80 (348)
T ss_dssp CCSEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCcccccccccHHHHHHHHhccCCceEEEECCCCCHHHHHHHHHhc
Confidence 358999999 9999999999999999999999985432 11121 2478899999999764 5555
Q ss_pred cCceeeEEEEecCCCCCCCC------hhhhHHHHHHHHhhcCCccEEEEEccceeecCCCCccccCCCCCCC-CChhHHH
Q 017914 120 TLKNYTHLLVSIPPLEGTGD------PMLKHGELLRSTLMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANP-TTELGRL 192 (364)
Q Consensus 120 ~~d~v~~~~~~~~~~~~~~~------~~~~~~~~l~~a~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~-~~~Y~~s 192 (364)
++|+|+|+++.........+ .......++++++++.++++|||+||.++|+.....+++|+.+..| .+.|+.+
T Consensus 81 ~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~g~~~~~~~~E~~~~~p~~~~Y~~s 160 (348)
T 1ek6_A 81 SFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHGVKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKS 160 (348)
T ss_dssp CEEEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSSHHHHH
T ss_pred CCCEEEECCCCcCccchhhchHHHHHHHHHHHHHHHHHHHHhCCCEEEEECcHHHhCCCCCCCcCCCCCCCCCCCchHHH
Confidence 78999999975322111111 1224456788888888899999999999999877778999998888 8899999
Q ss_pred HHHHHHHHHHhhhh-cCCcEEEEEecceecCCC-------------ChHHHHHHhc-----Cccccc---ccccCCcccc
Q 017914 193 RLSAEKGWLNLGRD-LGISAQVFRLGGIYGPGR-------------SSVDTIIKQL-----PLSEGQ---KMRRARQYTS 250 (364)
Q Consensus 193 K~~~E~~~~~~~~~-~~~~~~ilRp~~v~g~~~-------------~~~~~~~~~~-----~~~~~~---~~~~~~~~~~ 250 (364)
|.++|.+++.++++ .+++++++||+++||++. .++..+.... .+.... ....+++.++
T Consensus 161 K~~~e~~~~~~~~~~~~~~~~~lR~~~v~G~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~ 240 (348)
T 1ek6_A 161 KFFIEEMIRDLCQADKTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTEDGTGVRD 240 (348)
T ss_dssp HHHHHHHHHHHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHHTSSSCEEEECSCSSSSSSSCEEC
T ss_pred HHHHHHHHHHHHhcCCCcceEEEeeccccCCCcccccCcCcccchhhHHHHHHHHHHhcCCCeEEeCCcccCCCCceEEe
Confidence 99999999998766 239999999999999842 2333333221 111100 1125678899
Q ss_pred cccHHHHHHHHHHHccCC--CCC-ceEEEeCCCCCCHHHHHHHHHHHhcCCCCCcccCCCCCCCCCCCccCCCCCCCeEE
Q 017914 251 RIHVDDICQVLSASIDKP--SAW-NVYNVVDDDPAPREEVFAYAWDLVEKKWPGLLKHRKPRENTESSNEKGSSRGEKRV 327 (364)
Q Consensus 251 ~i~v~Dva~~~~~~l~~~--~~g-~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (364)
|||++|+|++++.+++++ ..| ++||+++++.+|+.|+++.+.+.+|.+.+... .+ . .........+
T Consensus 241 ~i~v~Dva~a~~~~~~~~~~~~g~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~-~~------~----~~~~~~~~~~ 309 (348)
T 1ek6_A 241 YIHVVDLAKGHIAALRKLKEQCGCRIYNLGTGTGYSVLQMVQAMEKASGKKIPYKV-VA------R----REGDVAACYA 309 (348)
T ss_dssp EEEHHHHHHHHHHHHHHHTTTCCEEEEEECCSCCEEHHHHHHHHHHHHCSCCCEEE-EC------C----CTTCCSEECB
T ss_pred eEEHHHHHHHHHHHHhcccccCCceEEEeCCCCCccHHHHHHHHHHHhCCCCceee-CC------C----CCccchhhcc
Confidence 999999999999999764 344 89999999999999999999999998744211 10 0 0112235678
Q ss_pred EchhHHHhcCcccCCCCHHHHHHHHHHHhcccCC
Q 017914 328 SNVRMKKELGVRLWHPSYKSGLQSIINQMDQPYQ 361 (364)
Q Consensus 328 d~~k~~~~lG~~p~~~~~~e~l~~~~~~~~~~~~ 361 (364)
|++|++++|||+|++ +++|+|+++++|++++.+
T Consensus 310 d~~k~~~~lG~~p~~-~l~~~l~~~~~w~~~~~~ 342 (348)
T 1ek6_A 310 NPSLAQEELGWTAAL-GLDRMCEDLWRWQKQNPS 342 (348)
T ss_dssp CCHHHHHTTCCCCCC-CHHHHHHHHHHHHHHCTT
T ss_pred CHHHHHHhcCCCCCC-CHHHHHHHHHHHHHhccc
Confidence 999999999999999 799999999999987654
|
| >4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-41 Score=306.02 Aligned_cols=283 Identities=12% Similarity=0.088 Sum_probs=217.7
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCChhhH--Hhhcc--CceeeEEEEec
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETAL--MILTT--LKNYTHLLVSI 131 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~--~~~~~--~d~v~~~~~~~ 131 (364)
+++|+||||| |||||++|+++|+++|+ +... ...+++++.+|++|++. ..+++ +|+|+|+++..
T Consensus 4 ~~~~~vlVtGatG~iG~~l~~~L~~~g~------~~~~-----~~~~~~~~~~D~~d~~~~~~~~~~~~~d~Vih~A~~~ 72 (319)
T 4b8w_A 4 FQSMRILVTGGSGLVGKAIQKVVADGAG------LPGE-----DWVFVSSKDADLTDTAQTRALFEKVQPTHVIHLAAMV 72 (319)
T ss_dssp CCCCEEEEETCSSHHHHHHHHHHHTTTC------CTTC-----EEEECCTTTCCTTSHHHHHHHHHHSCCSEEEECCCCC
T ss_pred ccCCeEEEECCCcHHHHHHHHHHHhcCC------cccc-----cccccCceecccCCHHHHHHHHhhcCCCEEEECceec
Confidence 5678999999 99999999999999998 2111 11344556799999774 56665 89999999874
Q ss_pred CCC-CCCCC------hhhhHHHHHHHHhhcCCccEEEEEccceeecCCCCccccCCC----CCCCCC-hhHHHHHHHHHH
Q 017914 132 PPL-EGTGD------PMLKHGELLRSTLMNGHLQWLGYLSSTGVYGHSGGAWVDEDY----PANPTT-ELGRLRLSAEKG 199 (364)
Q Consensus 132 ~~~-~~~~~------~~~~~~~~l~~a~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~----~~~~~~-~Y~~sK~~~E~~ 199 (364)
+.. ....+ .......++++++++.+++||||+||.++|+.....+++|++ +..|.+ +|+.+|.++|++
T Consensus 73 ~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~E~~ 152 (319)
T 4b8w_A 73 GGLFRNIKYNLDFWRKNVHMNDNVLHSAFEVGARKVVSCLSTCIFPDKTTYPIDETMIHNGPPHNSNFGYSYAKRMIDVQ 152 (319)
T ss_dssp CCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCGGGSCSSCCSSBCGGGGGBSCCCSSSHHHHHHHHHHHHH
T ss_pred ccccccccCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEEcchhhcCCCCCCCccccccccCCCCCCcchHHHHHHHHHHH
Confidence 321 11122 223445678899988899999999999999988888899987 666666 599999999999
Q ss_pred HHHhhhhcCCcEEEEEecceecCCCC-------hHHHHHHh----cCcc-cccccccCCcccccccHHHHHHHHHHHccC
Q 017914 200 WLNLGRDLGISAQVFRLGGIYGPGRS-------SVDTIIKQ----LPLS-EGQKMRRARQYTSRIHVDDICQVLSASIDK 267 (364)
Q Consensus 200 ~~~~~~~~~~~~~ilRp~~v~g~~~~-------~~~~~~~~----~~~~-~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~ 267 (364)
++.++++.+++++++||+++||++.. .+..++.. .... .....+.+++.++|+|++|+|++++.++++
T Consensus 153 ~~~~~~~~~~~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~ 232 (319)
T 4b8w_A 153 NRAYFQQYGCTFTAVIPTNVFGPHDNFNIEDGHVLPGLIHKVHLAKSSGSALTVWGTGNPRRQFIYSLDLAQLFIWVLRE 232 (319)
T ss_dssp HHHHHHHHCCEEEEEEECEEECTTCCCCTTTSCHHHHHHHHHHHHHHHTCCEEEESCSCCEECEEEHHHHHHHHHHHHHH
T ss_pred HHHHHHhhCCCEEEEeeccccCCCCCCCCccccccHHHHHHHHHHhccCCceEEeCCCCeeEEEEeHHHHHHHHHHHHhc
Confidence 99998888999999999999999854 22222222 1111 112336778899999999999999999987
Q ss_pred CC--CCceEEEeCCCCCCHHHHHHHHHHHhcCCCCCcccCCCCCCCCCCCccCCCCCCCeEEEchhHHHhcCcccCCCCH
Q 017914 268 PS--AWNVYNVVDDDPAPREEVFAYAWDLVEKKWPGLLKHRKPRENTESSNEKGSSRGEKRVSNVRMKKELGVRLWHPSY 345 (364)
Q Consensus 268 ~~--~g~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~ 345 (364)
+. .+++||+++++.+|+.|+++.+.+.+|.+.+..... ..........+|++|++++|||+|++ ++
T Consensus 233 ~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~-----------~~~~~~~~~~~d~~k~~~~lg~~p~~-~~ 300 (319)
T 4b8w_A 233 YNEVEPIILSVGEEDEVSIKEAAEAVVEAMDFHGEVTFDT-----------TKSDGQFKKTASNSKLRTYLPDFRFT-PF 300 (319)
T ss_dssp CCCSSCEEECCCGGGCEEHHHHHHHHHHHTTCCSCEEEET-----------TSCCCCSCCCBCCHHHHHHCTTCCCC-CH
T ss_pred cccCCceEEEecCCCceeHHHHHHHHHHHhCCCCcEEeCC-----------CCCcCcccccCCHHHHHHhcCCCCCC-CH
Confidence 53 367999999999999999999999999874321111 01122334579999999999999998 89
Q ss_pred HHHHHHHHHHhcccCCC
Q 017914 346 KSGLQSIINQMDQPYQC 362 (364)
Q Consensus 346 ~e~l~~~~~~~~~~~~~ 362 (364)
+|+|+++++|++++.++
T Consensus 301 ~~~l~~~~~~~~~~~~~ 317 (319)
T 4b8w_A 301 KQAVKETCAWFTDNYEQ 317 (319)
T ss_dssp HHHHHHHHHHHHHSCSS
T ss_pred HHHHHHHHHHHHHHHhh
Confidence 99999999999998765
|
| >2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-40 Score=300.54 Aligned_cols=300 Identities=16% Similarity=0.144 Sum_probs=221.7
Q ss_pred CeEEEEc-CChhhHHHHHHHHhC-CCEEEEEEeCchhhhhh-hhCCceEEEccCChh-h-H-HhhccCceeeEEEEecCC
Q 017914 60 NRMLILG-MGFVGRIFAEKIKNQ-GWVVSGTCTNVMKKKEL-EQSGFDVHLFNANET-A-L-MILTTLKNYTHLLVSIPP 133 (364)
Q Consensus 60 ~~vlVtG-tG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~l-~~~~~~~~~~D~~~~-~-~-~~~~~~d~v~~~~~~~~~ 133 (364)
|+||||| +||||++|+++|+++ |++|++++|+..+...+ ...+++++.+|++|. + . ..++++|+|+|+++....
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~d~vih~A~~~~~ 80 (345)
T 2bll_A 1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPHFHFVEGDISIHSEWIEYHVKKCDVVLPLVAIATP 80 (345)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGTTCTTEEEEECCTTTCSHHHHHHHHHCSEEEECBCCCCH
T ss_pred CeEEEECCCcHHHHHHHHHHHHhCCCEEEEEeCCcchHHHhhcCCCeEEEeccccCcHHHHHhhccCCCEEEEcccccCc
Confidence 6899999 999999999999998 89999999987665443 235789999999984 3 3 567889999999975432
Q ss_pred CCCCCCh------hhhHHHHHHHHhhcCCccEEEEEccceeecCCCCccccCCCCC-------CCCChhHHHHHHHHHHH
Q 017914 134 LEGTGDP------MLKHGELLRSTLMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPA-------NPTTELGRLRLSAEKGW 200 (364)
Q Consensus 134 ~~~~~~~------~~~~~~~l~~a~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~-------~~~~~Y~~sK~~~E~~~ 200 (364)
.....++ ......+++++++..+ ++|||+||.++|+.....+++|+++. .|.+.|+.+|..+|.++
T Consensus 81 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~v~~SS~~v~g~~~~~~~~e~~~~~~~~~~~~~~~~Y~~sK~~~e~~~ 159 (345)
T 2bll_A 81 IEYTRNPLRVFELDFEENLRIIRYCVKYR-KRIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVI 159 (345)
T ss_dssp HHHHHSHHHHHHHHTHHHHHHHHHHHHTT-CEEEEECCGGGGBTCCCSSBCTTTCCCBCCCTTCGGGHHHHHHHHHHHHH
T ss_pred cchhcCHHHHHHHHHHHHHHHHHHHHHhC-CeEEEEecHHHcCCCCCCCcCCcccccccCcccCcccccHHHHHHHHHHH
Confidence 1101111 1234567888888777 89999999999998777778888753 34558999999999999
Q ss_pred HHhhhhcCCcEEEEEecceecCCCC-----------hHHHHHHhcCcc-cccccccCCcccccccHHHHHHHHHHHccCC
Q 017914 201 LNLGRDLGISAQVFRLGGIYGPGRS-----------SVDTIIKQLPLS-EGQKMRRARQYTSRIHVDDICQVLSASIDKP 268 (364)
Q Consensus 201 ~~~~~~~~~~~~ilRp~~v~g~~~~-----------~~~~~~~~~~~~-~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~ 268 (364)
+.++++.+++++++||+.+||++.. .+..++...... .....+.+++.++|+|++|+|++++.+++++
T Consensus 160 ~~~~~~~~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~ 239 (345)
T 2bll_A 160 WAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEALYRIIENA 239 (345)
T ss_dssp HHHHHHHCCCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHHHTCCEEEGGGSCCEEECEEHHHHHHHHHHHHHCG
T ss_pred HHHHHhcCCCEEEEcCCcccCCCcccccccccccccHHHHHHHHHHcCCCcEEECCCCEEEEEEEHHHHHHHHHHHHhhc
Confidence 9998888999999999999999743 233333221111 1112356778899999999999999999876
Q ss_pred C---CCceEEEeCCC-CCCHHHHHHHHHHHhcCCCCCcccCCCCCC---CCCCCcc--CCCCCCCeEEEchhHHHhcCcc
Q 017914 269 S---AWNVYNVVDDD-PAPREEVFAYAWDLVEKKWPGLLKHRKPRE---NTESSNE--KGSSRGEKRVSNVRMKKELGVR 339 (364)
Q Consensus 269 ~---~g~~~~i~~~~-~~s~~el~~~i~~~~g~~~~~~~~~~~~~~---~~~~~~~--~~~~~~~~~~d~~k~~~~lG~~ 339 (364)
. .|++||+++++ .+|+.|+++.+.+.+|.+.+ ....+.... ....... .........+|++|++++|||+
T Consensus 240 ~~~~~g~~~~i~~~~~~~s~~e~~~~i~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~ 318 (345)
T 2bll_A 240 GNRCDGEIINIGNPENEASIEELGEMLLASFEKHPL-RHHFPPFAGFRVVESSSYYGKGYQDVEHRKPSIRNAHRCLDWE 318 (345)
T ss_dssp GGTTTTEEEEECCTTSEEEHHHHHHHHHHHHHTCTT-GGGSCCCCCEEEC------------CCCCCBCCHHHHHHHCCC
T ss_pred cccCCCceEEeCCCCCCCCHHHHHHHHHHHhCCCcc-cccCccccccccccchhhccccccchhhhcccHHHHHHhcCCC
Confidence 3 57899999986 79999999999999987632 111111000 0000000 0012245678999999999999
Q ss_pred cCCCCHHHHHHHHHHHhcccCCC
Q 017914 340 LWHPSYKSGLQSIINQMDQPYQC 362 (364)
Q Consensus 340 p~~~~~~e~l~~~~~~~~~~~~~ 362 (364)
|++ +++|+|+++++|++++.+.
T Consensus 319 p~~-~l~~~l~~~~~~~~~~~~~ 340 (345)
T 2bll_A 319 PKI-DMQETIDETLDFFLRTVDL 340 (345)
T ss_dssp CCC-CHHHHHHHHHHHHHHHSCT
T ss_pred ccc-cHHHHHHHHHHHHHHcCCC
Confidence 999 7999999999999876643
|
| >1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7e-41 Score=306.79 Aligned_cols=293 Identities=13% Similarity=0.084 Sum_probs=221.5
Q ss_pred CCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhh-----hCCceEEEccCChhhH--Hhhcc--CceeeEE
Q 017914 58 SPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELE-----QSGFDVHLFNANETAL--MILTT--LKNYTHL 127 (364)
Q Consensus 58 ~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~-----~~~~~~~~~D~~~~~~--~~~~~--~d~v~~~ 127 (364)
.+|+||||| +||||++|+++|+++|++|++++|+..+...+. ..++.++.+|++|++. ..+++ +|+|+|+
T Consensus 8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~ 87 (357)
T 1rkx_A 8 QGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVADGMQSEIGDIRDQNKLLESIREFQPEIVFHM 87 (357)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTTTTTTSEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred CCCEEEEECCCchHHHHHHHHHHhCCCeEEEEeCCCcccchhhHhhccCCceEEEEccccCHHHHHHHHHhcCCCEEEEC
Confidence 468999999 999999999999999999999999876543322 2478999999999764 55554 8999999
Q ss_pred EEecCCCCCCCC------hhhhHHHHHHHHhhcCC-ccEEEEEccceeecCCCC-ccccCCCCCCCCChhHHHHHHHHHH
Q 017914 128 LVSIPPLEGTGD------PMLKHGELLRSTLMNGH-LQWLGYLSSTGVYGHSGG-AWVDEDYPANPTTELGRLRLSAEKG 199 (364)
Q Consensus 128 ~~~~~~~~~~~~------~~~~~~~~l~~a~~~~~-~~r~v~~Ss~~vy~~~~~-~~~~E~~~~~~~~~Y~~sK~~~E~~ 199 (364)
++.........+ .......++++++...+ +++|||+||..+||.... .+++|+++..+.+.|+.+|.++|.+
T Consensus 88 A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~ 167 (357)
T 1rkx_A 88 AAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNITSDKCYDNKEWIWGYRENEAMGGYDPYSNSKGCAELV 167 (357)
T ss_dssp CSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHCCCCEEEEECCGGGBCCCCSSSCBCTTSCBCCSSHHHHHHHHHHHH
T ss_pred CCCcccccchhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEecCHHHhCCCCcCCCCCCCCCCCCCCccHHHHHHHHHH
Confidence 974211000111 12233467777777655 889999999999987653 4688888888999999999999999
Q ss_pred HHHhhhhc---------CCcEEEEEecceecCCC----ChHHHHHHhcCcccccccccCCcccccccHHHHHHHHHHHcc
Q 017914 200 WLNLGRDL---------GISAQVFRLGGIYGPGR----SSVDTIIKQLPLSEGQKMRRARQYTSRIHVDDICQVLSASID 266 (364)
Q Consensus 200 ~~~~~~~~---------~~~~~ilRp~~v~g~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~ 266 (364)
++.++.+. +++++++||+.+||++. .++..++..........+..+.+.++|+|++|+|++++.+++
T Consensus 168 ~~~~~~~~~~~~~~~~~gi~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~v~v~Dva~a~~~~~~ 247 (357)
T 1rkx_A 168 TSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWALDRIVPDILRAFEQSQPVIIRNPHAIRPWQHVLEPLSGYLLLAQ 247 (357)
T ss_dssp HHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCCCSSCHHHHHHHHHHTTCCEECSCTTCEECCEETHHHHHHHHHHHH
T ss_pred HHHHHHHHhhhhccccCCceEEEEeeceeeCCCCCccccHHHHHHHHHhcCCCEEECCCCCeeccEeHHHHHHHHHHHHH
Confidence 99987654 89999999999999875 344544443111112223456788999999999999999887
Q ss_pred C----C-CCCceEEEeCC--CCCCHHHHHHHHHHHhcCCCCCcccCCCCCCCCCCCccCCCCCCCeEEEchhHHHhcCcc
Q 017914 267 K----P-SAWNVYNVVDD--DPAPREEVFAYAWDLVEKKWPGLLKHRKPRENTESSNEKGSSRGEKRVSNVRMKKELGVR 339 (364)
Q Consensus 267 ~----~-~~g~~~~i~~~--~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~ 339 (364)
+ + ..+++||++++ +.+|+.|+++.+.+.+|.+.+. .... .+ .........+|++|++++|||+
T Consensus 248 ~~~~~~~~~~~~~ni~~~~~~~~s~~e~~~~i~~~~g~~~~~--~~~~------~~--~~~~~~~~~~d~~k~~~~lG~~ 317 (357)
T 1rkx_A 248 KLYTDGAEYAEGWNFGPNDADATPVKNIVEQMVKYWGEGASW--QLDG------NA--HPHEAHYLKLDCSKAKMQLGWH 317 (357)
T ss_dssp HHHHTCGGGCSEEECCCCGGGCEEHHHHHHHHHHHHCTTCCE--EC---------------CCCCCCBCCHHHHHHHCCC
T ss_pred hhhhcCCCCCceEEECCCCCCcccHHHHHHHHHHHhCCCCcc--ccCC------CC--CCcCcccccCCHHHHHHHhCCC
Confidence 4 2 44789999974 6899999999999999987432 1110 00 1122345679999999999999
Q ss_pred cCCCCHHHHHHHHHHHhcccCC
Q 017914 340 LWHPSYKSGLQSIINQMDQPYQ 361 (364)
Q Consensus 340 p~~~~~~e~l~~~~~~~~~~~~ 361 (364)
|++ +++|+|+++++|++++++
T Consensus 318 p~~-~l~e~l~~~~~~~~~~~~ 338 (357)
T 1rkx_A 318 PRW-NLNTTLEYIVGWHKNWLS 338 (357)
T ss_dssp CCC-CHHHHHHHHHHHHHHHHT
T ss_pred cCC-cHHHHHHHHHHHHHHHhc
Confidence 999 899999999999987653
|
| >1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.3e-41 Score=301.51 Aligned_cols=276 Identities=15% Similarity=0.133 Sum_probs=214.6
Q ss_pred CCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCChhhH--Hhhc--cCceeeEEEEecCC
Q 017914 59 PNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETAL--MILT--TLKNYTHLLVSIPP 133 (364)
Q Consensus 59 ~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~--~~~~--~~d~v~~~~~~~~~ 133 (364)
+|+||||| +||||++|+++|+++|++|++++|+. .+|++|.+. .+++ ++|+|+|+++....
T Consensus 3 ~~~ilVtGatG~iG~~l~~~L~~~g~~v~~~~r~~--------------~~D~~d~~~~~~~~~~~~~d~vih~a~~~~~ 68 (321)
T 1e6u_A 3 KQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRD--------------ELNLLDSRAVHDFFASERIDQVYLAAAKVGG 68 (321)
T ss_dssp CEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTT--------------TCCTTCHHHHHHHHHHHCCSEEEECCCCCCC
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEecCc--------------cCCccCHHHHHHHHHhcCCCEEEEcCeecCC
Confidence 57999999 99999999999999999999988752 278888663 5666 89999999975431
Q ss_pred CC-CCCC------hhhhHHHHHHHHhhcCCccEEEEEccceeecCCCCccccCCC----CCCCC-ChhHHHHHHHHHHHH
Q 017914 134 LE-GTGD------PMLKHGELLRSTLMNGHLQWLGYLSSTGVYGHSGGAWVDEDY----PANPT-TELGRLRLSAEKGWL 201 (364)
Q Consensus 134 ~~-~~~~------~~~~~~~~l~~a~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~----~~~~~-~~Y~~sK~~~E~~~~ 201 (364)
.. ...+ .......++++++++.++++|||+||.++|+.....+++|++ +..|. +.|+.+|..+|.+++
T Consensus 69 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~E~~~~ 148 (321)
T 1e6u_A 69 IVANNTYPADFIYQNMMIESNIIHAAHQNDVNKLLFLGSSCIYPKLAKQPMAESELLQGTLEPTNEPYAIAKIAGIKLCE 148 (321)
T ss_dssp HHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECCGGGSCTTCCSSBCGGGTTSSCCCGGGHHHHHHHHHHHHHHH
T ss_pred cchhhhCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEccHHHcCCCCCCCcCccccccCCCCCCCCccHHHHHHHHHHHH
Confidence 10 0011 122445688888888889999999999999987777888887 55554 599999999999999
Q ss_pred HhhhhcCCcEEEEEecceecCCCC-------hHHHHHHhcCc------ccccccccCCcccccccHHHHHHHHHHHccCC
Q 017914 202 NLGRDLGISAQVFRLGGIYGPGRS-------SVDTIIKQLPL------SEGQKMRRARQYTSRIHVDDICQVLSASIDKP 268 (364)
Q Consensus 202 ~~~~~~~~~~~ilRp~~v~g~~~~-------~~~~~~~~~~~------~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~ 268 (364)
.++++.+++++++||+.+||++.. ++..++..... ......+.+.+.++|||++|+|++++.+++++
T Consensus 149 ~~~~~~~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~i~v~Dva~~~~~~~~~~ 228 (321)
T 1e6u_A 149 SYNRQYGRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQKAPDVVVWGSGTPMREFLHVDDMAAASIHVMELA 228 (321)
T ss_dssp HHHHHHCCEEEEEEECEEESTTCCCCTTCSSHHHHHHHHHHHHHHHTCSEEEEESCSCCEECEEEHHHHHHHHHHHHHSC
T ss_pred HHHHHhCCCEEEEEeCCcCCcCCCCCCCCCccHHHHHHHHHHhhhcCCCceEEcCCCCEEEEeEEHHHHHHHHHHHHhCc
Confidence 998878999999999999998753 34444332110 01112456788999999999999999999887
Q ss_pred CC---------CceEEEeCCCCCCHHHHHHHHHHHhcCCCCCcccCCCCCCCCCCCccCCCCCCCeEEEchhHHHhcCcc
Q 017914 269 SA---------WNVYNVVDDDPAPREEVFAYAWDLVEKKWPGLLKHRKPRENTESSNEKGSSRGEKRVSNVRMKKELGVR 339 (364)
Q Consensus 269 ~~---------g~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~ 339 (364)
.. +++||+++++.+|+.|+++.+.+.+|.+.+. ...+ . .........+|++|+++ |||+
T Consensus 229 ~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~-~~~~-~---------~~~~~~~~~~d~~k~~~-lG~~ 296 (321)
T 1e6u_A 229 HEVWLENTQPMLSHINVGTGVDCTIRELAQTIAKVVGYKGRV-VFDA-S---------KPDGTPRKLLDVTRLHQ-LGWY 296 (321)
T ss_dssp HHHHHHTSBTTBCCEEESCSCCEEHHHHHHHHHHHHTCCSEE-EEET-T---------SCCCCSBCCBCCHHHHH-TTCC
T ss_pred ccccccccccCCceEEeCCCCCccHHHHHHHHHHHhCCCCce-EeCC-C---------CCCCcccccCCHHHHHh-cCCc
Confidence 43 5899999999999999999999999987321 1110 0 01123456789999998 9999
Q ss_pred cCCCCHHHHHHHHHHHhcccCC
Q 017914 340 LWHPSYKSGLQSIINQMDQPYQ 361 (364)
Q Consensus 340 p~~~~~~e~l~~~~~~~~~~~~ 361 (364)
|++ +++|+|+++++|++++.+
T Consensus 297 p~~-~~~~~l~~~~~~~~~~~~ 317 (321)
T 1e6u_A 297 HEI-SLEAGLASTYQWFLENQD 317 (321)
T ss_dssp CCC-CHHHHHHHHHHHHHHTC-
T ss_pred cCC-cHHHHHHHHHHHHHHHHH
Confidence 999 899999999999998775
|
| >1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-40 Score=300.88 Aligned_cols=291 Identities=16% Similarity=0.105 Sum_probs=217.9
Q ss_pred CCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCch-h----hhhhhh-CCceEEEccCChhhH--Hhhcc--CceeeEE
Q 017914 59 PNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVM-K----KKELEQ-SGFDVHLFNANETAL--MILTT--LKNYTHL 127 (364)
Q Consensus 59 ~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~-~----~~~l~~-~~~~~~~~D~~~~~~--~~~~~--~d~v~~~ 127 (364)
||+||||| +||||++|+++|+++|++|++++|... . ...+.. .++.++.+|++|.+. .++++ +|+|+|+
T Consensus 1 M~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~ 80 (347)
T 1orr_A 1 MAKLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRNKNDVTRLITKYMPDSCFHL 80 (347)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred CcEEEEeCCCchhHHHHHHHHHhCCCEEEEEeCCCccCchhhhhhhccCCceEEEEcCCCCHHHHHHHHhccCCCEEEEC
Confidence 47999999 999999999999999999999998531 1 112222 358899999999774 56666 9999999
Q ss_pred EEecCCCCCCCC------hhhhHHHHHHHHhhcCCcc-EEEEEccceeecCCCCc----------------cccCCCCCC
Q 017914 128 LVSIPPLEGTGD------PMLKHGELLRSTLMNGHLQ-WLGYLSSTGVYGHSGGA----------------WVDEDYPAN 184 (364)
Q Consensus 128 ~~~~~~~~~~~~------~~~~~~~~l~~a~~~~~~~-r~v~~Ss~~vy~~~~~~----------------~~~E~~~~~ 184 (364)
++.........+ .......++++++...+++ +|||+||.++|+..... +++|+.+..
T Consensus 81 A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~iv~~SS~~v~g~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~ 160 (347)
T 1orr_A 81 AGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSNCNIIYSSTNKVYGDLEQYKYNETETRYTCVDKPNGYDESTQLD 160 (347)
T ss_dssp CCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEEEGGGGTTCTTSCEEECSSCEEETTCTTCBCTTSCCC
T ss_pred CcccChhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEeccHHHhCCCCcCCcccccccccccccccCccccCCCC
Confidence 975332100111 1223456788888877775 99999999999865433 266777778
Q ss_pred CCChhHHHHHHHHHHHHHhhhhcCCcEEEEEecceecCCCC------hHHHHHH----hcC--cccccccccCCcccccc
Q 017914 185 PTTELGRLRLSAEKGWLNLGRDLGISAQVFRLGGIYGPGRS------SVDTIIK----QLP--LSEGQKMRRARQYTSRI 252 (364)
Q Consensus 185 ~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilRp~~v~g~~~~------~~~~~~~----~~~--~~~~~~~~~~~~~~~~i 252 (364)
+.+.|+.+|.++|.+++.++.+.+++++++||+.+||+... .+..++. ... .......+++++.++|+
T Consensus 161 ~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i 240 (347)
T 1orr_A 161 FHSPYGCSKGAADQYMLDYARIFGLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKNGINKPFTISGNGKQVRDVL 240 (347)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTCCCBTTBCHHHHHHHHHHHHHTTCCCCEEEESSSCCEEECE
T ss_pred CCCchHHHHHHHHHHHHHHHHHhCCcEEEEccCceeCcCCCCCCcCcHHHHHHHHHHhCcccCCCCeEEecCCcceEeeE
Confidence 88999999999999999998888999999999999998742 2333322 210 00112346678899999
Q ss_pred cHHHHHHHHHHHccCC--CCCceEEEeCCC--CCCHHHHHHHHHHHhcCCCCCcccCCCCCCCCCCCccCCCCCCCeEEE
Q 017914 253 HVDDICQVLSASIDKP--SAWNVYNVVDDD--PAPREEVFAYAWDLVEKKWPGLLKHRKPRENTESSNEKGSSRGEKRVS 328 (364)
Q Consensus 253 ~v~Dva~~~~~~l~~~--~~g~~~~i~~~~--~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 328 (364)
|++|+|++++.++++. ..|++||++++. ++|+.|+++.+.+.+|.+.+. ...+ . .........+|
T Consensus 241 ~v~Dva~a~~~~~~~~~~~~g~~~~v~~~~~~~~s~~e~~~~i~~~~g~~~~~-~~~~------~----~~~~~~~~~~d 309 (347)
T 1orr_A 241 HAEDMISLYFTALANVSKIRGNAFNIGGTIVNSLSLLELFKLLEDYCNIDMRF-TNLP------V----RESDQRVFVAD 309 (347)
T ss_dssp EHHHHHHHHHHHHHTHHHHTTCEEEESSCGGGEEEHHHHHHHHHHHHTCCCCE-EEEC------C----CSSCCSEECBC
T ss_pred EHHHHHHHHHHHHhccccCCCCEEEeCCCCCCCccHHHHHHHHHHHhCCCCCc-eeCC------C----CCCCcceeecC
Confidence 9999999999999862 357899999986 499999999999999987432 1111 0 11122346689
Q ss_pred chhHHHhcCcccCCCCHHHHHHHHHHHhcccCC
Q 017914 329 NVRMKKELGVRLWHPSYKSGLQSIINQMDQPYQ 361 (364)
Q Consensus 329 ~~k~~~~lG~~p~~~~~~e~l~~~~~~~~~~~~ 361 (364)
++|++++|||+|++ +++|+|+++++|++++.+
T Consensus 310 ~~k~~~~lG~~p~~-~~~e~l~~~~~~~~~~~~ 341 (347)
T 1orr_A 310 IKKITNAIDWSPKV-SAKDGVQKMYDWTSSILE 341 (347)
T ss_dssp CHHHHHHHCCCCCS-CHHHHHHHHHHHHHHC--
T ss_pred HHHHHHHHCCCccC-CHHHHHHHHHHHHHHHHH
Confidence 99999999999998 799999999999998875
|
| >4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.8e-40 Score=292.01 Aligned_cols=280 Identities=16% Similarity=0.143 Sum_probs=211.3
Q ss_pred CeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCChhhHHhhccCceeeEEEEecCCC--CC
Q 017914 60 NRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETALMILTTLKNYTHLLVSIPPL--EG 136 (364)
Q Consensus 60 ~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~~~~~~~d~v~~~~~~~~~~--~~ 136 (364)
||||||| |||||++|+++|+++||+|++++|++... -+..|. .+...+.++|.|+|+++..... ..
T Consensus 1 MkILVTGatGfIG~~L~~~L~~~G~~V~~l~R~~~~~---------~~~~~~--~~~~~l~~~d~vihla~~~i~~~~~~ 69 (298)
T 4b4o_A 1 MRVLVGGGTGFIGTALTQLLNARGHEVTLVSRKPGPG---------RITWDE--LAASGLPSCDAAVNLAGENILNPLRR 69 (298)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTT---------EEEHHH--HHHHCCCSCSEEEECCCCCSSCTTSC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCcC---------eeecch--hhHhhccCCCEEEEeccCcccchhhh
Confidence 7899999 99999999999999999999999975431 122221 1225678999999998642111 11
Q ss_pred CCC--------hhhhHHHHHHHHhhcCC--ccEEEEEccceeecCCCCccccCCCCCCCCChhHHHHHHHHHHHHHhhhh
Q 017914 137 TGD--------PMLKHGELLRSTLMNGH--LQWLGYLSSTGVYGHSGGAWVDEDYPANPTTELGRLRLSAEKGWLNLGRD 206 (364)
Q Consensus 137 ~~~--------~~~~~~~~l~~a~~~~~--~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~~sK~~~E~~~~~~~~~ 206 (364)
+.. .....+.++.++++..+ .++||++||.++||.....+.+|+++..+.+.|+..|...|... +...
T Consensus 70 ~~~~~~~~~~~~~v~~t~~l~~~~~~~~~~~~~~i~~Ss~~vyg~~~~~~~~E~~p~~~~~~~~~~~~~~e~~~--~~~~ 147 (298)
T 4b4o_A 70 WNETFQKEVLGSRLETTQLLAKAITKAPQPPKAWVLVTGVAYYQPSLTAEYDEDSPGGDFDFFSNLVTKWEAAA--RLPG 147 (298)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHCSSCCSEEEEEEEGGGSCCCSSCCBCTTCCCSCSSHHHHHHHHHHHHH--CCSS
T ss_pred hhhhhhhhhhhHHHHHHHHHHHHHHHhCCCceEEEEEeeeeeecCCCCCcccccCCccccchhHHHHHHHHHHH--Hhhc
Confidence 111 12234456777776554 44589999999999998889999999999999999888877653 3456
Q ss_pred cCCcEEEEEecceecCCCChHHHHHHhcCcccccccccCCcccccccHHHHHHHHHHHccCCCCCceEEEeCCCCCCHHH
Q 017914 207 LGISAQVFRLGGIYGPGRSSVDTIIKQLPLSEGQKMRRARQYTSRIHVDDICQVLSASIDKPSAWNVYNVVDDDPAPREE 286 (364)
Q Consensus 207 ~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~~g~~~~i~~~~~~s~~e 286 (364)
.+++++++||+.+||++.+.+..+...........++.+++.++|||++|+|++++.+++++..+++||+++++++|++|
T Consensus 148 ~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~ihv~Dva~a~~~~~~~~~~~g~yn~~~~~~~t~~e 227 (298)
T 4b4o_A 148 DSTRQVVVRSGVVLGRGGGAMGHMLLPFRLGLGGPIGSGHQFFPWIHIGDLAGILTHALEANHVHGVLNGVAPSSATNAE 227 (298)
T ss_dssp SSSEEEEEEECEEECTTSHHHHHHHHHHHTTCCCCBTTSCSBCCEEEHHHHHHHHHHHHHCTTCCEEEEESCSCCCBHHH
T ss_pred cCCceeeeeeeeEEcCCCCchhHHHHHHhcCCcceecccCceeecCcHHHHHHHHHHHHhCCCCCCeEEEECCCccCHHH
Confidence 68999999999999999887777766655555667789999999999999999999999998777799999999999999
Q ss_pred HHHHHHHHhcCCCCCcccCCCCCCCCCC-CccCCCCCCCeEEEchhHHHhcCcccCCCCHHHHHHHHHHH
Q 017914 287 VFAYAWDLVEKKWPGLLKHRKPRENTES-SNEKGSSRGEKRVSNVRMKKELGVRLWHPSYKSGLQSIINQ 355 (364)
Q Consensus 287 l~~~i~~~~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~e~l~~~~~~ 355 (364)
+++.+++.+|++.. ++.|........ .+..+....+.+++++|++ ++||+++||+++|+|+++++.
T Consensus 228 ~~~~ia~~lgrp~~--~pvP~~~~~~~~g~~~~~~~l~~~rv~~~kl~-~~Gf~f~yp~l~~al~~l~~~ 294 (298)
T 4b4o_A 228 FAQTFGAALGRRAF--IPLPSAVVQAVFGRQRAIMLLEGQKVIPRRTL-ATGYQYSFPELGAALKEIAEN 294 (298)
T ss_dssp HHHHHHHHHTCCCC--CCBCHHHHHHHHCHHHHHHHHCCCCBCCHHHH-HTTCCCSCCSHHHHHHHHHHC
T ss_pred HHHHHHHHhCcCCc--ccCCHHHHHHHhcchhHHHhhCCCEEcHHHHH-HCCCCCCCCCHHHHHHHHHHh
Confidence 99999999998732 222100000000 0001112245678899996 799999999999999999874
|
| >2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-39 Score=295.69 Aligned_cols=287 Identities=18% Similarity=0.141 Sum_probs=217.5
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhh----hhh-hhCCceEEEccCChhhHHhhccCceeeEEEEe
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKK----KEL-EQSGFDVHLFNANETALMILTTLKNYTHLLVS 130 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~----~~l-~~~~~~~~~~D~~~~~~~~~~~~d~v~~~~~~ 130 (364)
..+|+||||| +||||++|+++|+++|++|++++|+.... ..+ ...+++++.+|+.+.. +.++|+|+|+++.
T Consensus 25 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~---~~~~d~vih~A~~ 101 (343)
T 2b69_A 25 KDRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEPL---YIEVDQIYHLASP 101 (343)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTGGGTTCTTEEEEECCTTSCC---CCCCSEEEECCSC
T ss_pred cCCCEEEEEcCccHHHHHHHHHHHHCCCEEEEEeCCCccchhhhhhhccCCceEEEeCccCChh---hcCCCEEEECccc
Confidence 4568999999 99999999999999999999999964321 111 1246889999998753 5679999999975
Q ss_pred cCCCCCCCCh------hhhHHHHHHHHhhcCCccEEEEEccceeecCCCCccccCC-----CCCCCCChhHHHHHHHHHH
Q 017914 131 IPPLEGTGDP------MLKHGELLRSTLMNGHLQWLGYLSSTGVYGHSGGAWVDED-----YPANPTTELGRLRLSAEKG 199 (364)
Q Consensus 131 ~~~~~~~~~~------~~~~~~~l~~a~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~-----~~~~~~~~Y~~sK~~~E~~ 199 (364)
........++ ......++++++...++ +|||+||.++|+.....+++|+ .+..|.+.|+.+|.++|.+
T Consensus 102 ~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS~~v~g~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~~ 180 (343)
T 2b69_A 102 ASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGA-RLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETM 180 (343)
T ss_dssp CSHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTC-EEEEEEEGGGGBSCSSSSBCTTCCCBCCSSSTTHHHHHHHHHHHHH
T ss_pred cCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCC-cEEEECcHHHhCCCCCCCCcccccccCCCCCCCCchHHHHHHHHHH
Confidence 4321111122 22345678888877776 8999999999997766778887 4666778999999999999
Q ss_pred HHHhhhhcCCcEEEEEecceecCCC-----ChHHHHHHhcCcc-cccccccCCcccccccHHHHHHHHHHHccCCCCCce
Q 017914 200 WLNLGRDLGISAQVFRLGGIYGPGR-----SSVDTIIKQLPLS-EGQKMRRARQYTSRIHVDDICQVLSASIDKPSAWNV 273 (364)
Q Consensus 200 ~~~~~~~~~~~~~ilRp~~v~g~~~-----~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~~g~~ 273 (364)
++.++++.+++++++||+.+||++. ..+..++...... .....+.+.+.++|+|++|+|++++.+++.+. +++
T Consensus 181 ~~~~~~~~~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~-~~~ 259 (343)
T 2b69_A 181 CYAYMKQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSNV-SSP 259 (343)
T ss_dssp HHHHHHHHCCCEEEEEECCEECTTCCTTCCCHHHHHHHHHHHTCCEEEESSSCCEEECEEHHHHHHHHHHHHTSSC-CSC
T ss_pred HHHHHHHhCCcEEEEEEcceeCcCCCCCcccHHHHHHHHHHcCCCceEcCCCCeEEeeEeHHHHHHHHHHHHhcCC-CCe
Confidence 9998888899999999999999874 2333333221001 11224567788999999999999999998754 679
Q ss_pred EEEeCCCCCCHHHHHHHHHHHhcCCCCCcccCCCCCCCCCCCccCCCCCCCeEEEchhHHHhcCcccCCCCHHHHHHHHH
Q 017914 274 YNVVDDDPAPREEVFAYAWDLVEKKWPGLLKHRKPRENTESSNEKGSSRGEKRVSNVRMKKELGVRLWHPSYKSGLQSII 353 (364)
Q Consensus 274 ~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~e~l~~~~ 353 (364)
||+++++.+|+.|+++.+.+.+|.+.+. ...+. .........+|++|++++|||+|++ +++|+|++++
T Consensus 260 ~~i~~~~~~s~~e~~~~i~~~~g~~~~~-~~~p~----------~~~~~~~~~~d~~k~~~~lG~~p~~-~l~e~l~~~~ 327 (343)
T 2b69_A 260 VNLGNPEEHTILEFAQLIKNLVGSGSEI-QFLSE----------AQDDPQKRKPDIKKAKLMLGWEPVV-PLEEGLNKAI 327 (343)
T ss_dssp EEESCCCEEEHHHHHHHHHHHHTCCCCE-EEECC----------CTTCCCCCCBCCHHHHHHHCCCCCS-CHHHHHHHHH
T ss_pred EEecCCCCCcHHHHHHHHHHHhCCCCCc-eeCCC----------CCCCCceecCCHHHHHHHcCCCCCC-CHHHHHHHHH
Confidence 9999999999999999999999987332 11110 0112234667999999999999998 7999999999
Q ss_pred HHhcccC
Q 017914 354 NQMDQPY 360 (364)
Q Consensus 354 ~~~~~~~ 360 (364)
+|++++.
T Consensus 328 ~~~~~~~ 334 (343)
T 2b69_A 328 HYFRKEL 334 (343)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9998765
|
| >1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-39 Score=298.39 Aligned_cols=296 Identities=16% Similarity=0.176 Sum_probs=220.8
Q ss_pred CeEEEEc-CChhhHHHHHHHHhC-CCEEEEEEeCch--hhhhhh----hCCceEEEccCChhhH--Hhhc--cCceeeEE
Q 017914 60 NRMLILG-MGFVGRIFAEKIKNQ-GWVVSGTCTNVM--KKKELE----QSGFDVHLFNANETAL--MILT--TLKNYTHL 127 (364)
Q Consensus 60 ~~vlVtG-tG~iG~~l~~~L~~~-g~~V~~~~r~~~--~~~~l~----~~~~~~~~~D~~~~~~--~~~~--~~d~v~~~ 127 (364)
|+||||| +||||++|+++|+++ |++|++++|+.. ....+. ..++.++.+|++|.+. .+++ ++|+|+|+
T Consensus 1 MkvlVTGasG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~ 80 (361)
T 1kew_A 1 MKILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNFEHADICDSAEITRIFEQYQPDAVMHL 80 (361)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred CEEEEECCCchHhHHHHHHHHhcCCCeEEEEecCCCCCchhhhhhhhcCCCeEEEECCCCCHHHHHHHHhhcCCCEEEEC
Confidence 5899999 999999999999998 799999999652 222222 2468899999999764 5555 89999999
Q ss_pred EEecCCCCCCC------ChhhhHHHHHHHHhhcC--Ccc-------EEEEEccceeecCCCC--c--------cccCCCC
Q 017914 128 LVSIPPLEGTG------DPMLKHGELLRSTLMNG--HLQ-------WLGYLSSTGVYGHSGG--A--------WVDEDYP 182 (364)
Q Consensus 128 ~~~~~~~~~~~------~~~~~~~~~l~~a~~~~--~~~-------r~v~~Ss~~vy~~~~~--~--------~~~E~~~ 182 (364)
++......... +.+.....++++++... +++ +|||+||.++||.... . +++|+.+
T Consensus 81 A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~v~~~~~~~~~iv~~SS~~v~g~~~~~~~~~~~~~~~~~~E~~~ 160 (361)
T 1kew_A 81 AAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTETTA 160 (361)
T ss_dssp CSCCCHHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSCTTSCCCCBCTTSC
T ss_pred CCCcChhhhhhCHHHHHHHHHHHHHHHHHHHHHhccCcccccccCceEEEeCCHHHhCCCcccccccccccCCCCCCCCC
Confidence 97543110001 12234456788888776 776 9999999999986542 1 6899998
Q ss_pred CCCCChhHHHHHHHHHHHHHhhhhcCCcEEEEEecceecCCCC---hHHHHHHhcCcc-cccccccCCcccccccHHHHH
Q 017914 183 ANPTTELGRLRLSAEKGWLNLGRDLGISAQVFRLGGIYGPGRS---SVDTIIKQLPLS-EGQKMRRARQYTSRIHVDDIC 258 (364)
Q Consensus 183 ~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilRp~~v~g~~~~---~~~~~~~~~~~~-~~~~~~~~~~~~~~i~v~Dva 258 (364)
..+.+.|+.+|.++|.+++.++.+.+++++++||+.+||+... .+..++...... .....+.+.+.++|+|++|+|
T Consensus 161 ~~~~~~Y~~sK~~~e~~~~~~~~~~gi~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva 240 (361)
T 1kew_A 161 YAPSSPYSASKASSDHLVRAWRRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYGKGDQIRDWLYVEDHA 240 (361)
T ss_dssp CCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEESTTCCTTSHHHHHHHHHHHTCCEEEETTSCCEEEEEEHHHHH
T ss_pred CCCCCccHHHHHHHHHHHHHHHHHhCCcEEEEeeceeECCCCCcccHHHHHHHHHHcCCCceEcCCCceeEeeEEHHHHH
Confidence 8899999999999999999998888999999999999999753 333333221101 112235677889999999999
Q ss_pred HHHHHHccCCCCCceEEEeCCCCCCHHHHHHHHHHHhcCCCCCcccCCCCCCCCCCCccCCCCCCCeEEEchhHHHhcCc
Q 017914 259 QVLSASIDKPSAWNVYNVVDDDPAPREEVFAYAWDLVEKKWPGLLKHRKPRENTESSNEKGSSRGEKRVSNVRMKKELGV 338 (364)
Q Consensus 259 ~~~~~~l~~~~~g~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~ 338 (364)
++++.+++++..|++||+++++.+|+.|+++.+.+.+|.+.+...+.. ......+. .........+|++|++++|||
T Consensus 241 ~a~~~~~~~~~~g~~~~v~~~~~~s~~e~~~~i~~~~g~~~~~~~p~~--~~~~~~~~-~~~~~~~~~~d~~k~~~~lG~ 317 (361)
T 1kew_A 241 RALHMVVTEGKAGETYNIGGHNEKKNLDVVFTICDLLDEIVPKATSYR--EQITYVAD-RPGHDRRYAIDAGKISRELGW 317 (361)
T ss_dssp HHHHHHHHHCCTTCEEEECCCCEEEHHHHHHHHHHHHHHHSCCSSCGG--GGEEEECC-CTTCCCBCCBCCHHHHHHHCC
T ss_pred HHHHHHHhCCCCCCEEEecCCCeeeHHHHHHHHHHHhCCcCccccccc--cceeecCC-CCcccceeecCHHHHHHHhCC
Confidence 999999987777899999999999999999999999987644221100 00000000 011123457899999999999
Q ss_pred ccCCCCHHHHHHHHHHHhccc
Q 017914 339 RLWHPSYKSGLQSIINQMDQP 359 (364)
Q Consensus 339 ~p~~~~~~e~l~~~~~~~~~~ 359 (364)
+|++ +++|+|+++++|++++
T Consensus 318 ~p~~-~~~e~l~~~~~~~~~~ 337 (361)
T 1kew_A 318 KPLE-TFESGIRKTVEWYLAN 337 (361)
T ss_dssp CCSC-CHHHHHHHHHHHHHHC
T ss_pred CCcc-CHHHHHHHHHHHHHhc
Confidence 9999 7999999999999865
|
| >1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-39 Score=293.77 Aligned_cols=292 Identities=16% Similarity=0.105 Sum_probs=217.0
Q ss_pred CeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchh----hhhhh---hCCceEEEccCChhhH--Hhhc--cCceeeEE
Q 017914 60 NRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMK----KKELE---QSGFDVHLFNANETAL--MILT--TLKNYTHL 127 (364)
Q Consensus 60 ~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~----~~~l~---~~~~~~~~~D~~~~~~--~~~~--~~d~v~~~ 127 (364)
|+||||| +||||++|+++|+++|++|++++|.... ...+. ..++.++.+|++|++. ..++ ++|+|+|+
T Consensus 1 m~vlVTGatG~iG~~l~~~L~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~D~vih~ 80 (338)
T 1udb_A 1 MRVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALMTEILHDHAIDTVIHF 80 (338)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHHTSCCEEEECCTTCHHHHHHHHHHTTCSEEEEC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCCcchhHHHHHHhhcCCcceEEEccCCCHHHHHHHhhccCCCEEEEC
Confidence 5899999 9999999999999999999999874322 11111 2467889999999764 4454 48999999
Q ss_pred EEecCCCCCCCC------hhhhHHHHHHHHhhcCCccEEEEEccceeecCCCCccccCCCCCCC-CChhHHHHHHHHHHH
Q 017914 128 LVSIPPLEGTGD------PMLKHGELLRSTLMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANP-TTELGRLRLSAEKGW 200 (364)
Q Consensus 128 ~~~~~~~~~~~~------~~~~~~~~l~~a~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~-~~~Y~~sK~~~E~~~ 200 (364)
++.........+ .......++++++++.++++|||+||.++|+.....+++|+.+..| .+.|+.+|.++|.++
T Consensus 81 A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~g~~~~~~~~e~~~~~~~~~~Y~~sK~~~e~~~ 160 (338)
T 1udb_A 81 AGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNFIFSSSATVYGDNPKIPYVESFPTGTPQSPYGKSKLMVEQIL 160 (338)
T ss_dssp CSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCCSSSBCTTSCCCCCSSHHHHHHHHHHHHH
T ss_pred CccCccccchhcHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEccHHHhCCCCCCCcCcccCCCCCCChHHHHHHHHHHHH
Confidence 975321111111 1223445777777777889999999999998777778889888755 789999999999999
Q ss_pred HHhhhhc-CCcEEEEEecceecCCC-------------ChHHHHHHh-----cCccc-c--cccccCCcccccccHHHHH
Q 017914 201 LNLGRDL-GISAQVFRLGGIYGPGR-------------SSVDTIIKQ-----LPLSE-G--QKMRRARQYTSRIHVDDIC 258 (364)
Q Consensus 201 ~~~~~~~-~~~~~ilRp~~v~g~~~-------------~~~~~~~~~-----~~~~~-~--~~~~~~~~~~~~i~v~Dva 258 (364)
+.++.+. +++++++||+++||+.. .++..+... ..+.. + ....++.+.++|||++|+|
T Consensus 161 ~~~~~~~~~~~~~ilR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~i~v~Dva 240 (338)
T 1udb_A 161 TDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDYIHVMDLA 240 (338)
T ss_dssp HHHHHHSTTCEEEEEEECEEECCCTTSSSCCCCCSSCCSHHHHHHHHHHTSSSCEEEECSCSSSSSSSCEECEEEHHHHH
T ss_pred HHHHHhcCCCceEEEeeceecCCCcccccccccccchhhHHHHHHHHHHhcCCCcEEecCcccCCCCceeeeeEEHHHHH
Confidence 9988766 89999999999999742 122332221 11110 0 0123567889999999999
Q ss_pred HHHHHHccCC--CC-CceEEEeCCCCCCHHHHHHHHHHHhcCCCCCcccCCCCCCCCCCCccCCCCCCCeEEEchhHHHh
Q 017914 259 QVLSASIDKP--SA-WNVYNVVDDDPAPREEVFAYAWDLVEKKWPGLLKHRKPRENTESSNEKGSSRGEKRVSNVRMKKE 335 (364)
Q Consensus 259 ~~~~~~l~~~--~~-g~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~ 335 (364)
++++.++++. .. +++||+++++++|+.|+++.+.+.+|.+.+..... . .........+|++|++++
T Consensus 241 ~a~~~~l~~~~~~~~~~~yni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~-------~----~~~~~~~~~~d~~k~~~~ 309 (338)
T 1udb_A 241 DGHVVAMEKLANKPGVHIYNLGAGVGNSVLDVVNAFSKACGKPVNYHFAP-------R----REGDLPAYWADASKADRE 309 (338)
T ss_dssp HHHHHHHHHHTTCCEEEEEEESCSCCEEHHHHHHHHHHHHTSCCCEEEEC-------C----CTTCCSBCCBCCHHHHHH
T ss_pred HHHHHHHhhhhccCCCcEEEecCCCceeHHHHHHHHHHHhCCCCcceeCC-------C----CCCchhhhhcCHHHHHHH
Confidence 9999998753 23 37999999999999999999999999874422111 0 011223456899999999
Q ss_pred cCcccCCCCHHHHHHHHHHHhcccCCCC
Q 017914 336 LGVRLWHPSYKSGLQSIINQMDQPYQCS 363 (364)
Q Consensus 336 lG~~p~~~~~~e~l~~~~~~~~~~~~~~ 363 (364)
|||+|++ +++|+|+++++|++++.+.+
T Consensus 310 lG~~p~~-~l~~~l~~~~~w~~~~~~~~ 336 (338)
T 1udb_A 310 LNWRVTR-TLDEMAQDTWHWQSRHPQGY 336 (338)
T ss_dssp HCCCCCC-CHHHHHHHHHHHHHHCTTCS
T ss_pred cCCCcCC-CHHHHHHHHHHHHHhccccc
Confidence 9999999 89999999999999876544
|
| >2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-40 Score=297.84 Aligned_cols=286 Identities=11% Similarity=0.114 Sum_probs=216.0
Q ss_pred CCCeEEEEc-CChhhHHHHHHHHhC--CCEEEEEEeCchhhhhhhhCCceEEEccCChhhH--Hhhc--cCceeeEEEEe
Q 017914 58 SPNRMLILG-MGFVGRIFAEKIKNQ--GWVVSGTCTNVMKKKELEQSGFDVHLFNANETAL--MILT--TLKNYTHLLVS 130 (364)
Q Consensus 58 ~~~~vlVtG-tG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~--~~~~--~~d~v~~~~~~ 130 (364)
|+|+||||| +||||++|+++|+++ |++|++++|+..... +. .+++++.+|++|.+. ..++ ++|+|+|+++.
T Consensus 1 M~~~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~-~~-~~~~~~~~D~~d~~~~~~~~~~~~~d~vih~a~~ 78 (312)
T 2yy7_A 1 MNPKILIIGACGQIGTELTQKLRKLYGTENVIASDIRKLNTD-VV-NSGPFEVVNALDFNQIEHLVEVHKITDIYLMAAL 78 (312)
T ss_dssp CCCCEEEETTTSHHHHHHHHHHHHHHCGGGEEEEESCCCSCH-HH-HSSCEEECCTTCHHHHHHHHHHTTCCEEEECCCC
T ss_pred CCceEEEECCccHHHHHHHHHHHHhCCCCEEEEEcCCCcccc-cc-CCCceEEecCCCHHHHHHHHhhcCCCEEEECCcc
Confidence 357999999 999999999999999 899999999765532 21 467899999999764 5566 89999999975
Q ss_pred cCCCCCCCC------hhhhHHHHHHHHhhcCCccEEEEEccceeecCCC-CccccCCCCCCCCChhHHHHHHHHHHHHHh
Q 017914 131 IPPLEGTGD------PMLKHGELLRSTLMNGHLQWLGYLSSTGVYGHSG-GAWVDEDYPANPTTELGRLRLSAEKGWLNL 203 (364)
Q Consensus 131 ~~~~~~~~~------~~~~~~~~l~~a~~~~~~~r~v~~Ss~~vy~~~~-~~~~~E~~~~~~~~~Y~~sK~~~E~~~~~~ 203 (364)
.... ...+ .......+++++++..++++|||+||.++|+... ..+.+|+.+..|.+.|+.+|.++|.+++.+
T Consensus 79 ~~~~-~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~~~~~ 157 (312)
T 2yy7_A 79 LSAT-AEKNPAFAWDLNMNSLFHVLNLAKAKKIKKIFWPSSIAVFGPTTPKENTPQYTIMEPSTVYGISKQAGERWCEYY 157 (312)
T ss_dssp CHHH-HHHCHHHHHHHHHHHHHHHHHHHHTTSCSEEECCEEGGGCCTTSCSSSBCSSCBCCCCSHHHHHHHHHHHHHHHH
T ss_pred CCCc-hhhChHHHHHHHHHHHHHHHHHHHHcCCCEEEEeccHHHhCCCCCCCCccccCcCCCCchhHHHHHHHHHHHHHH
Confidence 3221 0011 1224456888888888899999999999998654 356889888889999999999999999998
Q ss_pred hhhcCCcEEEEEecceecCCC----C----hHHHHHHhcCcccccccccCCcccccccHHHHHHHHHHHccCCCC----C
Q 017914 204 GRDLGISAQVFRLGGIYGPGR----S----SVDTIIKQLPLSEGQKMRRARQYTSRIHVDDICQVLSASIDKPSA----W 271 (364)
Q Consensus 204 ~~~~~~~~~ilRp~~v~g~~~----~----~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~~----g 271 (364)
+++.+++++++||+.+||+.. . ....+.....-.....++.+++.++|+|++|+|++++.+++++.. |
T Consensus 158 ~~~~~~~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~ 237 (312)
T 2yy7_A 158 HNIYGVDVRSIRYPGLISWSTPPGGGTTDYAVDIFYKAIADKKYECFLSSETKMPMMYMDDAIDATINIMKAPVEKIKIH 237 (312)
T ss_dssp HHHHCCEEECEEECEEECSSSCCCSCTTTHHHHHHHHHHHTSEEEESSCTTCCEEEEEHHHHHHHHHHHHHSCGGGCCCS
T ss_pred HHhcCCcEEEEeCCeEecCCCCCCCchhhhHHHHHHHHHcCCCeEEecCCCceeeeeeHHHHHHHHHHHHhCcccccccC
Confidence 888899999999999999642 1 122222211111112345677889999999999999999987643 4
Q ss_pred ceEEEeCCCCCCHHHHHHHHHHHhcCCCCCcccCCCCCCCCCCCccCCCCCCCeEEEchhHHHhcCcccCCCCHHHHHHH
Q 017914 272 NVYNVVDDDPAPREEVFAYAWDLVEKKWPGLLKHRKPRENTESSNEKGSSRGEKRVSNVRMKKELGVRLWHPSYKSGLQS 351 (364)
Q Consensus 272 ~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~e~l~~ 351 (364)
++||+++ +.+|+.|+++.+.+.+|.. + +.+.. ..... ........+|++|++++|||+|++ +++|+|++
T Consensus 238 ~~~ni~~-~~~s~~e~~~~i~~~~~~~-~--i~~~~-----~~~~~-~~~~~~~~~d~~k~~~~lG~~p~~-~l~~~l~~ 306 (312)
T 2yy7_A 238 SSYNLAA-MSFTPTEIANEIKKHIPEF-T--ITYEP-----DFRQK-IADSWPASIDDSQAREDWDWKHTF-DLESMTKD 306 (312)
T ss_dssp SCEECCS-EEECHHHHHHHHHTTCTTC-E--EEECC-----CTHHH-HHTTSCSSBCCHHHHHHHCCCCCC-CHHHHHHH
T ss_pred ceEEeCC-CccCHHHHHHHHHHHCCCC-c--eEecc-----Ccccc-ccccccccCCHHHHHHHcCCCCCC-CHHHHHHH
Confidence 8999986 7899999999999998832 1 11100 00000 001223578999999999999999 89999999
Q ss_pred HHHHhc
Q 017914 352 IINQMD 357 (364)
Q Consensus 352 ~~~~~~ 357 (364)
+++|++
T Consensus 307 ~~~~~k 312 (312)
T 2yy7_A 307 MIEHLS 312 (312)
T ss_dssp HHHHHC
T ss_pred HHHHhC
Confidence 999985
|
| >2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.7e-39 Score=290.35 Aligned_cols=282 Identities=12% Similarity=0.125 Sum_probs=214.6
Q ss_pred CCCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhh-hhhhh-CCceEEEccCChhhH--Hhhcc--CceeeEEE
Q 017914 56 WQSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKK-KELEQ-SGFDVHLFNANETAL--MILTT--LKNYTHLL 128 (364)
Q Consensus 56 ~~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~-~~l~~-~~~~~~~~D~~~~~~--~~~~~--~d~v~~~~ 128 (364)
...+|+||||| +||||++|+++|+++|++|++++|+.... ..+.. .++.++.+|++|.+. .++++ +|+|+|++
T Consensus 18 ~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~l~~~~~~~~~~~Dl~d~~~~~~~~~~~~~D~vih~A 97 (333)
T 2q1w_A 18 GSHMKKVFITGICGQIGSHIAELLLERGDKVVGIDNFATGRREHLKDHPNLTFVEGSIADHALVNQLIGDLQPDAVVHTA 97 (333)
T ss_dssp ---CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGSCCCTTEEEEECCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred cCCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCCccchhhHhhcCCceEEEEeCCCHHHHHHHHhccCCcEEEECc
Confidence 45678999999 99999999999999999999999975432 22222 478899999999774 56666 99999999
Q ss_pred EecCCCCCCCCh----hhhHHHHHHHHhhcCCccEEEEEccceeec----CCCCccccCCCCCCCC-ChhHHHHHHHHHH
Q 017914 129 VSIPPLEGTGDP----MLKHGELLRSTLMNGHLQWLGYLSSTGVYG----HSGGAWVDEDYPANPT-TELGRLRLSAEKG 199 (364)
Q Consensus 129 ~~~~~~~~~~~~----~~~~~~~l~~a~~~~~~~r~v~~Ss~~vy~----~~~~~~~~E~~~~~~~-~~Y~~sK~~~E~~ 199 (364)
+..... ...++ ......++++++...++++|||+||.++|+ .... +++|++ .|. +.|+.+|.++|.+
T Consensus 98 ~~~~~~-~~~~~~~~~N~~~~~~l~~a~~~~~~~~iV~~SS~~~~g~~~~~~~~-~~~E~~--~p~~~~Y~~sK~~~E~~ 173 (333)
T 2q1w_A 98 ASYKDP-DDWYNDTLTNCVGGSNVVQAAKKNNVGRFVYFQTALCYGVKPIQQPV-RLDHPR--NPANSSYAISKSANEDY 173 (333)
T ss_dssp CCCSCT-TCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGCSCCCSSSB-CTTSCC--CCTTCHHHHHHHHHHHH
T ss_pred eecCCC-ccCChHHHHHHHHHHHHHHHHHHhCCCEEEEECcHHHhCCCcccCCC-CcCCCC--CCCCCchHHHHHHHHHH
Confidence 865432 11111 234456888888888899999999999998 5444 788877 677 8999999999999
Q ss_pred HHH-hhhhcCCcEEEEEecceecCCC--ChHHHHHHhcCcccccccccCCcccccccHHHHHHHHHHHccCCCCCceEEE
Q 017914 200 WLN-LGRDLGISAQVFRLGGIYGPGR--SSVDTIIKQLPLSEGQKMRRARQYTSRIHVDDICQVLSASIDKPSAWNVYNV 276 (364)
Q Consensus 200 ~~~-~~~~~~~~~~ilRp~~v~g~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~~g~~~~i 276 (364)
++. ++ +++++||+.+||++. ..+..++....... ...+ +.+.++|+|++|+|++++.+++++. |++||+
T Consensus 174 ~~~s~~-----~~~ilR~~~v~gp~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~i~v~Dva~ai~~~~~~~~-g~~~~v 245 (333)
T 2q1w_A 174 LEYSGL-----DFVTFRLANVVGPRNVSGPLPIFFQRLSEGK-KCFV-TKARRDFVFVKDLARATVRAVDGVG-HGAYHF 245 (333)
T ss_dssp HHHHTC-----CEEEEEESEEESTTCCSSHHHHHHHHHHTTC-CCEE-EECEECEEEHHHHHHHHHHHHTTCC-CEEEEC
T ss_pred HHhhhC-----CeEEEeeceEECcCCcCcHHHHHHHHHHcCC-eeeC-CCceEeeEEHHHHHHHHHHHHhcCC-CCEEEe
Confidence 987 64 799999999999984 34444433211111 2234 5678899999999999999998877 899999
Q ss_pred eCCCCCCHHHHHHHHHHHhcCCCCCcccCCCCCCCCCCCccCCCCCCCeEEEchhHHHhcCcccCCCCHHHHHHHHHHHh
Q 017914 277 VDDDPAPREEVFAYAWDLVEKKWPGLLKHRKPRENTESSNEKGSSRGEKRVSNVRMKKELGVRLWHPSYKSGLQSIINQM 356 (364)
Q Consensus 277 ~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~e~l~~~~~~~ 356 (364)
++++.+++.|+++.+.+.+|.+ +.. ..+ ..+...........+|++|+++. ||+|++ +++|+|+++++|+
T Consensus 246 ~~~~~~s~~e~~~~i~~~~g~~-~~~-~~~------~~~~~~~~~~~~~~~d~~k~~~~-G~~p~~-~~~~~l~~~~~~~ 315 (333)
T 2q1w_A 246 SSGTDVAIKELYDAVVEAMALP-SYP-EPE------IRELGPDDAPSILLDPSRTIQDF-GKIEFT-PLKETVAAAVAYF 315 (333)
T ss_dssp SCSCCEEHHHHHHHHHHHTTCS-SCC-CCE------EEECCTTSCCCCCBCCHHHHHHH-CCCCCC-CHHHHHHHHHHHH
T ss_pred CCCCCccHHHHHHHHHHHhCCC-Cce-eCC------CCCcccccccccccCCHHHHHhc-CCCcCC-CHHHHHHHHHHHH
Confidence 9999999999999999999976 211 110 00011122335678999999987 999998 7999999999999
Q ss_pred ccc
Q 017914 357 DQP 359 (364)
Q Consensus 357 ~~~ 359 (364)
+++
T Consensus 316 ~~~ 318 (333)
T 2q1w_A 316 REY 318 (333)
T ss_dssp HHH
T ss_pred HHH
Confidence 864
|
| >1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-39 Score=299.37 Aligned_cols=301 Identities=13% Similarity=0.056 Sum_probs=222.2
Q ss_pred CCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchh-----hhhh-------hhCCceEEEccCChhhH--Hhhcc--C
Q 017914 59 PNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMK-----KKEL-------EQSGFDVHLFNANETAL--MILTT--L 121 (364)
Q Consensus 59 ~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~-----~~~l-------~~~~~~~~~~D~~~~~~--~~~~~--~ 121 (364)
+|+||||| +||||++|+++|+++|++|++++|+... ...+ ...++.++.+|++|.+. ..+++ +
T Consensus 24 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~ 103 (375)
T 1t2a_A 24 RNVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEVKP 103 (375)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHHCC
T ss_pred CcEEEEECCCchHHHHHHHHHHHCCCEEEEEECCccccchhhHHHHhhhhccccCCCceEEEccCCCHHHHHHHHHhcCC
Confidence 37899999 9999999999999999999999997643 2222 12468899999999764 45554 6
Q ss_pred ceeeEEEEecCCCCCCCCh------hhhHHHHHHHHhhcCCc---cEEEEEccceeecCCCCccccCCCCCCCCChhHHH
Q 017914 122 KNYTHLLVSIPPLEGTGDP------MLKHGELLRSTLMNGHL---QWLGYLSSTGVYGHSGGAWVDEDYPANPTTELGRL 192 (364)
Q Consensus 122 d~v~~~~~~~~~~~~~~~~------~~~~~~~l~~a~~~~~~---~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~~s 192 (364)
|+|+|+++.........++ ......++++++...++ ++|||+||.++|+.....+++|+++..|.+.|+.+
T Consensus 104 d~vih~A~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~E~~~~~~~~~Y~~s 183 (375)
T 1t2a_A 104 TEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVKFYQASTSELYGKVQEIPQKETTPFYPRSPYGAA 183 (375)
T ss_dssp SEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGTCSCSSSSBCTTSCCCCCSHHHHH
T ss_pred CEEEECCCcccccccccCHHHHHHHHHHHHHHHHHHHHHhCCCccceEEEecchhhhCCCCCCCCCccCCCCCCChhHHH
Confidence 9999999753321111111 22345678888888777 89999999999997777789999999899999999
Q ss_pred HHHHHHHHHHhhhhcCCcEEEEEecceecCCCC--hH----HHHHHhcCcc--cccccccCCcccccccHHHHHHHHHHH
Q 017914 193 RLSAEKGWLNLGRDLGISAQVFRLGGIYGPGRS--SV----DTIIKQLPLS--EGQKMRRARQYTSRIHVDDICQVLSAS 264 (364)
Q Consensus 193 K~~~E~~~~~~~~~~~~~~~ilRp~~v~g~~~~--~~----~~~~~~~~~~--~~~~~~~~~~~~~~i~v~Dva~~~~~~ 264 (364)
|.++|.+++.++.+.+++++++|++.+||++.. ++ ..++...... ....++.+++.++|+|++|+|++++.+
T Consensus 184 K~~~e~~~~~~~~~~~~~~~i~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~i~v~Dva~a~~~~ 263 (375)
T 1t2a_A 184 KLYAYWIVVNFREAYNLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRDWGHAKDYVEAMWLM 263 (375)
T ss_dssp HHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCSCEEESCTTCEECCEEHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCEEEEecccccCCCCCCCcchHHHHHHHHHHHcCCCceeEeCCCCceeeeEEHHHHHHHHHHH
Confidence 999999999998888999999999999998643 22 2222110001 111346678899999999999999999
Q ss_pred ccCCCCCceEEEeCCCCCCHHHHHHHHHHHhcCCCCCc---ccCCCCC--C---CC-CCC-ccCCCCCCCeEEEchhHHH
Q 017914 265 IDKPSAWNVYNVVDDDPAPREEVFAYAWDLVEKKWPGL---LKHRKPR--E---NT-ESS-NEKGSSRGEKRVSNVRMKK 334 (364)
Q Consensus 265 l~~~~~g~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~---~~~~~~~--~---~~-~~~-~~~~~~~~~~~~d~~k~~~ 334 (364)
++++. +++||+++++.+|+.|+++.+.+.+|.+.+.. ++..... . .. ..+ ...........+|++|+++
T Consensus 264 ~~~~~-~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~ 342 (375)
T 1t2a_A 264 LQNDE-PEDFVIATGEVHSVREFVEKSFLHIGKTIVWEGKNENEVGRCKETGKVHVTVDLKYYRPTEVDFLQGDCTKAKQ 342 (375)
T ss_dssp HHSSS-CCCEEECCSCCEEHHHHHHHHHHHTTCCEEEESCGGGCEEEETTTCCEEEEECGGGSCSSCCCBCCBCCHHHHH
T ss_pred HhcCC-CceEEEeCCCcccHHHHHHHHHHHhCCCcccccccccccccccccccceeecCcccCCcccchhhcCCHHHHHH
Confidence 98765 46999999999999999999999999863210 0000000 0 00 000 0111223345679999999
Q ss_pred hcCcccCCCCHHHHHHHHHHHhcccCC
Q 017914 335 ELGVRLWHPSYKSGLQSIINQMDQPYQ 361 (364)
Q Consensus 335 ~lG~~p~~~~~~e~l~~~~~~~~~~~~ 361 (364)
+|||+|++ +++|+|+++++|++++..
T Consensus 343 ~lG~~p~~-~l~e~l~~~~~~~~~~~~ 368 (375)
T 1t2a_A 343 KLNWKPRV-AFDELVREMVHADVELMR 368 (375)
T ss_dssp HHCCCCCS-CHHHHHHHHHHHHHHHHH
T ss_pred hcCCCccC-CHHHHHHHHHHHHHHhhc
Confidence 99999999 899999999999987653
|
| >3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=7e-40 Score=291.08 Aligned_cols=270 Identities=15% Similarity=0.120 Sum_probs=208.7
Q ss_pred CeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCChhhH--Hhhc--cCceeeEEEEecCCC
Q 017914 60 NRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETAL--MILT--TLKNYTHLLVSIPPL 134 (364)
Q Consensus 60 ~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~--~~~~--~~d~v~~~~~~~~~~ 134 (364)
|+||||| +||||++|+++|+++|++|++++|. .+|++|.+. ..++ ++|+|+|+++.....
T Consensus 6 m~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~---------------~~D~~d~~~~~~~~~~~~~d~vi~~a~~~~~~ 70 (287)
T 3sc6_A 6 ERVIITGANGQLGKQLQEELNPEEYDIYPFDKK---------------LLDITNISQVQQVVQEIRPHIIIHCAAYTKVD 70 (287)
T ss_dssp EEEEEESTTSHHHHHHHHHSCTTTEEEEEECTT---------------TSCTTCHHHHHHHHHHHCCSEEEECCCCCCHH
T ss_pred eEEEEECCCCHHHHHHHHHHHhCCCEEEEeccc---------------ccCCCCHHHHHHHHHhcCCCEEEECCcccChH
Confidence 5999999 9999999999999999999999993 278888764 5555 699999999765422
Q ss_pred CCCCCh------hhhHHHHHHHHhhcCCccEEEEEccceeecCCCCccccCCCCCCCCChhHHHHHHHHHHHHHhhhhcC
Q 017914 135 EGTGDP------MLKHGELLRSTLMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANPTTELGRLRLSAEKGWLNLGRDLG 208 (364)
Q Consensus 135 ~~~~~~------~~~~~~~l~~a~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~ 208 (364)
....++ ......+++++++..++ ||||+||..+|+.....+++|+++..|.+.|+.+|.++|++++.++.
T Consensus 71 ~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~v~~SS~~vy~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~--- 146 (287)
T 3sc6_A 71 QAEKERDLAYVINAIGARNVAVASQLVGA-KLVYISTDYVFQGDRPEGYDEFHNPAPINIYGASKYAGEQFVKELHN--- 146 (287)
T ss_dssp HHTTCHHHHHHHHTHHHHHHHHHHHHHTC-EEEEEEEGGGSCCCCSSCBCTTSCCCCCSHHHHHHHHHHHHHHHHCS---
T ss_pred HHhcCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEchhhhcCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhCC---
Confidence 111222 22345678888888777 69999999999988888899999999999999999999999987654
Q ss_pred CcEEEEEecceecCCC-ChHHHHHHhcCcccccccccCCcccccccHHHHHHHHHHHccCCCCCceEEEeCCCCCCHHHH
Q 017914 209 ISAQVFRLGGIYGPGR-SSVDTIIKQLPLSEGQKMRRARQYTSRIHVDDICQVLSASIDKPSAWNVYNVVDDDPAPREEV 287 (364)
Q Consensus 209 ~~~~ilRp~~v~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~~g~~~~i~~~~~~s~~el 287 (364)
+++++||+.+||++. .++..+........... ..+++.++|+|++|+|++++.+++++. +++||+++++.+|+.|+
T Consensus 147 -~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~v~Dva~~~~~~~~~~~-~~~~~i~~~~~~s~~e~ 223 (287)
T 3sc6_A 147 -KYFIVRTSWLYGKYGNNFVKTMIRLGKEREEIS-VVADQIGSPTYVADLNVMINKLIHTSL-YGTYHVSNTGSCSWFEF 223 (287)
T ss_dssp -SEEEEEECSEECSSSCCHHHHHHHHHTTCSEEE-EECSCEECCEEHHHHHHHHHHHHTSCC-CEEEECCCBSCEEHHHH
T ss_pred -CcEEEeeeeecCCCCCcHHHHHHHHHHcCCCeE-eecCcccCceEHHHHHHHHHHHHhCCC-CCeEEEcCCCcccHHHH
Confidence 689999999999864 44555544322111111 124578999999999999999999887 77999999999999999
Q ss_pred HHHHHHHhcCCCCCcccCCCCCCCCCCCccCCCCCCCeEEEchhHHHhcCcccCCCCHHHHHHHHHHHhccc
Q 017914 288 FAYAWDLVEKKWPGLLKHRKPRENTESSNEKGSSRGEKRVSNVRMKKELGVRLWHPSYKSGLQSIINQMDQP 359 (364)
Q Consensus 288 ~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~e~l~~~~~~~~~~ 359 (364)
++.+.+.+|.+.+ ....+.. .. ...........+|++|++ +|||+|++ +++|+|+++++|++++
T Consensus 224 ~~~i~~~~g~~~~-~~~~~~~----~~-~~~~~~~~~~~~d~~k~~-~lg~~p~~-~~~~~l~~~~~~~~~~ 287 (287)
T 3sc6_A 224 AKKIFSYANMKVN-VLPVSTE----EF-GAAAARPKYSIFQHNMLR-LNGFLQMP-SWEEGLERFFIETKSH 287 (287)
T ss_dssp HHHHHHHHTCCCE-EEEECHH----HH-CCSSCCCSBCCBCCHHHH-HTTCCCCC-BHHHHHHHHHHHTC--
T ss_pred HHHHHHHcCCCcc-eeeeehh----hc-CcccCCCCcccccHHHHH-hhCCCCCc-cHHHHHHHHHHHHhcC
Confidence 9999999998732 2111000 00 011233455678999998 99999998 8999999999999864
|
| >1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-39 Score=289.95 Aligned_cols=282 Identities=12% Similarity=0.141 Sum_probs=202.8
Q ss_pred eEEEEc-CChhhHHHHHHHHhCC-CEEEEEEeCchhh--hhhhhCCceEEEccCChhhH--Hhhc-----cCceeeEEEE
Q 017914 61 RMLILG-MGFVGRIFAEKIKNQG-WVVSGTCTNVMKK--KELEQSGFDVHLFNANETAL--MILT-----TLKNYTHLLV 129 (364)
Q Consensus 61 ~vlVtG-tG~iG~~l~~~L~~~g-~~V~~~~r~~~~~--~~l~~~~~~~~~~D~~~~~~--~~~~-----~~d~v~~~~~ 129 (364)
+||||| +||||++|+++|+++| ++|++++|+.... ..+ .++. +.+|++|.+. ..++ .+|+|+|+++
T Consensus 1 ~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~--~~~~-~~~d~~~~~~~~~~~~~~~~~~~d~vi~~a~ 77 (310)
T 1eq2_A 1 MIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNL--VDLN-IADYMDKEDFLIQIMAGEEFGDVEAIFHEGA 77 (310)
T ss_dssp CEEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGGGHHH--HTSC-CSEEEEHHHHHHHHHTTCCCSSCCEEEECCS
T ss_pred CEEEEcCccHHHHHHHHHHHHCCCcEEEEEccCCCCchhhhc--Ccce-eccccccHHHHHHHHhccccCCCcEEEECcc
Confidence 589999 9999999999999999 9999999976542 222 2334 7789998764 4455 4999999998
Q ss_pred ecCCCCCCCCh------hhhHHHHHHHHhhcCCccEEEEEccceeecCCCCccccCCCCCCCCChhHHHHHHHHHHHHHh
Q 017914 130 SIPPLEGTGDP------MLKHGELLRSTLMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANPTTELGRLRLSAEKGWLNL 203 (364)
Q Consensus 130 ~~~~~~~~~~~------~~~~~~~l~~a~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~~sK~~~E~~~~~~ 203 (364)
..... ..++ ......+++++++..++ +|||+||.++|+.....+++|+++..|.+.|+.+|.++|.+++.+
T Consensus 78 ~~~~~--~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS~~v~g~~~~~~~~E~~~~~p~~~Y~~sK~~~e~~~~~~ 154 (310)
T 1eq2_A 78 CSSTT--EWDGKYMMDNNYQYSKELLHYCLEREI-PFLYASSAATYGGRTSDFIESREYEKPLNVYGYSKFLFDEYVRQI 154 (310)
T ss_dssp CCCTT--CCCHHHHHHHTHHHHHHHHHHHHHHTC-CEEEEEEGGGGTTCCSCBCSSGGGCCCSSHHHHHHHHHHHHHHHH
T ss_pred cccCc--ccCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEeeHHHhCCCCCCCCCCCCCCCCCChhHHHHHHHHHHHHHH
Confidence 65431 1222 22345688888888888 999999999999877778999999999999999999999999999
Q ss_pred hhhcCCcEEEEEecceecCCCC-------hHHHHHHhcCccc-ccccccCCc-ccccccHHHHHHHHHHHccCCCCCceE
Q 017914 204 GRDLGISAQVFRLGGIYGPGRS-------SVDTIIKQLPLSE-GQKMRRARQ-YTSRIHVDDICQVLSASIDKPSAWNVY 274 (364)
Q Consensus 204 ~~~~~~~~~ilRp~~v~g~~~~-------~~~~~~~~~~~~~-~~~~~~~~~-~~~~i~v~Dva~~~~~~l~~~~~g~~~ 274 (364)
+++.+++++++||+.+||++.. .+..++....... ....+.+.+ .++|+|++|+|++++.+++++. +++|
T Consensus 155 ~~~~g~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~i~v~Dva~~~~~~~~~~~-~~~~ 233 (310)
T 1eq2_A 155 LPEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLWFLENGV-SGIF 233 (310)
T ss_dssp GGGCSSCEEEEEECEEESSSCGGGGGGSCHHHHHHHHHHC-------------CBCEEEHHHHHHHHHHHHHHCC-CEEE
T ss_pred HHHcCCCEEEEeCCcEECcCCCCCCccchHHHHHHHHHHcCCCcEEecCCCcceEccEEHHHHHHHHHHHHhcCC-CCeE
Confidence 8888999999999999999753 3344433211111 112356677 8999999999999999998877 8899
Q ss_pred EEeCCCCCCHHHHHHHHHHHhcCCCCC-cccCCCCCCCCCCCccCCCCCCCeEEEchhHHHhcCc-ccCCCCHHHHHHHH
Q 017914 275 NVVDDDPAPREEVFAYAWDLVEKKWPG-LLKHRKPRENTESSNEKGSSRGEKRVSNVRMKKELGV-RLWHPSYKSGLQSI 352 (364)
Q Consensus 275 ~i~~~~~~s~~el~~~i~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~-~p~~~~~~e~l~~~ 352 (364)
|+++++.+|+.|+++.+.+.+|.+ +. ....+ ............+|++|++ +||| .|.+ +++|+|+++
T Consensus 234 ~i~~~~~~s~~e~~~~i~~~~g~~-~~~~~~~~--------~~~~~~~~~~~~~~~~~~~-~lG~~~~~~-~l~~~l~~~ 302 (310)
T 1eq2_A 234 NLGTGRAESFQAVADATLAYHKKG-QIEYIPFP--------DKLKGRYQAFTQADLTNLR-AAGYDKPFK-TVAEGVTEY 302 (310)
T ss_dssp EESCSCCBCHHHHHHHC------------------------------CCCSCCBCCHHHH-HTTCCCCCC-CHHHHHHHH
T ss_pred EEeCCCccCHHHHHHHHHHHcCCC-CceeCCCC--------hhhhcccccccccchHHHH-hcCCCCCCC-CHHHHHHHH
Confidence 999999999999999999999876 11 11110 0011122344678999997 4999 7877 899999999
Q ss_pred HHHhcccC
Q 017914 353 INQMDQPY 360 (364)
Q Consensus 353 ~~~~~~~~ 360 (364)
++|+++++
T Consensus 303 ~~~~~~~~ 310 (310)
T 1eq2_A 303 MAWLNRDA 310 (310)
T ss_dssp HHHTC---
T ss_pred HHHHHhcC
Confidence 99998753
|
| >1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-38 Score=293.63 Aligned_cols=301 Identities=13% Similarity=0.058 Sum_probs=221.6
Q ss_pred CCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhh-----hhhh------hCCceEEEccCChhhH--Hhhcc--Cc
Q 017914 59 PNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKK-----KELE------QSGFDVHLFNANETAL--MILTT--LK 122 (364)
Q Consensus 59 ~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~-----~~l~------~~~~~~~~~D~~~~~~--~~~~~--~d 122 (364)
||+||||| +||||++++++|+++|++|++++|+.... ..+. ..++.++.+|++|.+. ..+++ +|
T Consensus 1 m~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d 80 (372)
T 1db3_A 1 SKVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREVQPD 80 (372)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHHCCS
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccchHHHHHHhhccccCCCceEEEECCCCCHHHHHHHHHhcCCC
Confidence 57999999 99999999999999999999999976431 1111 1467889999999764 45554 79
Q ss_pred eeeEEEEecCCCCCCCChh------hhHHHHHHHHhhcCCc---cEEEEEccceeecCCCCccccCCCCCCCCChhHHHH
Q 017914 123 NYTHLLVSIPPLEGTGDPM------LKHGELLRSTLMNGHL---QWLGYLSSTGVYGHSGGAWVDEDYPANPTTELGRLR 193 (364)
Q Consensus 123 ~v~~~~~~~~~~~~~~~~~------~~~~~~l~~a~~~~~~---~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~~sK 193 (364)
+|+|+++.........++. .....++++++...++ ++|||+||.++|+.....+++|+.+..|.+.|+.+|
T Consensus 81 ~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~iv~~SS~~v~g~~~~~~~~E~~~~~~~~~Y~~sK 160 (372)
T 1db3_A 81 EVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAK 160 (372)
T ss_dssp EEEECCCCCTTTTTTSCHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGGTTCCSSSBCTTSCCCCCSHHHHHH
T ss_pred EEEECCcccCccccccCHHHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCChhhhCCCCCCCCCccCCCCCCChHHHHH
Confidence 9999998654433333322 2345678888887777 799999999999987777899999999999999999
Q ss_pred HHHHHHHHHhhhhcCCcEEEEEecceecCCCC--h----HHHHHHhcCcc--cccccccCCcccccccHHHHHHHHHHHc
Q 017914 194 LSAEKGWLNLGRDLGISAQVFRLGGIYGPGRS--S----VDTIIKQLPLS--EGQKMRRARQYTSRIHVDDICQVLSASI 265 (364)
Q Consensus 194 ~~~E~~~~~~~~~~~~~~~ilRp~~v~g~~~~--~----~~~~~~~~~~~--~~~~~~~~~~~~~~i~v~Dva~~~~~~l 265 (364)
.++|.+++.++.+.+++++++|++.+||++.. + +..++.....+ .....+++++.++|+|++|+|++++.++
T Consensus 161 ~~~e~~~~~~~~~~~~~~~~~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~i~v~Dva~a~~~~~ 240 (372)
T 1db3_A 161 LYAYWITVNYRESYGMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAKDYVKMQWMML 240 (372)
T ss_dssp HHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCCCEEESCTTCEECCEEHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHhCCCeEEEEECCccCCCCCCcchhhHHHHHHHHHHcCCCCceeecCCCceeeeeEHHHHHHHHHHHH
Confidence 99999999998888999999999999998743 2 22222211111 1113466788999999999999999999
Q ss_pred cCCCCCceEEEeCCCCCCHHHHHHHHHHHhcCCCCCc---ccCC---------C---CCCC---C-CCCc-cCCCCCCCe
Q 017914 266 DKPSAWNVYNVVDDDPAPREEVFAYAWDLVEKKWPGL---LKHR---------K---PREN---T-ESSN-EKGSSRGEK 325 (364)
Q Consensus 266 ~~~~~g~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~---~~~~---------~---~~~~---~-~~~~-~~~~~~~~~ 325 (364)
+++. +++||+++++.+|+.|+++.+.+.+|.+.+.. ++.. . .... . ..+. .........
T Consensus 241 ~~~~-~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (372)
T 1db3_A 241 QQEQ-PEDFVIATGVQYSVRQFVEMAAAQLGIKLRFEGTGVEEKGIVVSVTGHDAPGVKPGDVIIAVDPRYFRPAEVETL 319 (372)
T ss_dssp SSSS-CCCEEECCCCCEEHHHHHHHHHHTTTEEEEEESCGGGCEEEEEEECSSSCTTCCTTCEEEEECGGGCCCCC-CCC
T ss_pred hcCC-CceEEEcCCCceeHHHHHHHHHHHhCCCcccccccccccccccccccccccccccccceeeccccccCCCchhhh
Confidence 8765 47999999999999999999999998763211 0000 0 0000 0 0000 111223345
Q ss_pred EEEchhHHHhcCcccCCCCHHHHHHHHHHHhcccCC
Q 017914 326 RVSNVRMKKELGVRLWHPSYKSGLQSIINQMDQPYQ 361 (364)
Q Consensus 326 ~~d~~k~~~~lG~~p~~~~~~e~l~~~~~~~~~~~~ 361 (364)
.+|++|++++|||+|++ +++|+|+++++|++++..
T Consensus 320 ~~d~~k~~~~lG~~p~~-~l~e~l~~~~~~~~~~~~ 354 (372)
T 1db3_A 320 LGDPTKAHEKLGWKPEI-TLREMVSEMVANDLEAAK 354 (372)
T ss_dssp CBCCHHHHHHHCCCCCS-CHHHHHHHHHHHHHHHHH
T ss_pred ccCHHHHHHHhCCcccc-CHHHHHHHHHHHHHHhhh
Confidence 67999999999999999 899999999999987654
|
| >2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7e-39 Score=293.47 Aligned_cols=285 Identities=12% Similarity=0.136 Sum_probs=215.5
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCC-CEEEEEEeCchhh--hhhhhCCceEEEccCChhhH--Hhhc-----cCceee
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQG-WVVSGTCTNVMKK--KELEQSGFDVHLFNANETAL--MILT-----TLKNYT 125 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g-~~V~~~~r~~~~~--~~l~~~~~~~~~~D~~~~~~--~~~~-----~~d~v~ 125 (364)
..+|+||||| +||||++|+++|+++| ++|++++|+.... ..+ .++. +.+|++|.+. .+++ ++|+|+
T Consensus 44 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~--~~~~-~~~d~~~~~~~~~~~~~~~~~~~d~Vi 120 (357)
T 2x6t_A 44 IEGRMIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNL--VDLN-IADYMDKEDFLIQIMAGEEFGDVEAIF 120 (357)
T ss_dssp ----CEEEETTTSHHHHHHHHHHHHTTCCCEEEEECCSSGGGGGGT--TTSC-CSEEEEHHHHHHHHHTTCCCSSCCEEE
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCcEEEEEecCCCcchhhcc--cCce-EeeecCcHHHHHHHHhhcccCCCCEEE
Confidence 3458999999 9999999999999999 9999999976542 222 2344 6789998764 4444 599999
Q ss_pred EEEEecCCCCCCCCh------hhhHHHHHHHHhhcCCccEEEEEccceeecCCCCccccCCCCCCCCChhHHHHHHHHHH
Q 017914 126 HLLVSIPPLEGTGDP------MLKHGELLRSTLMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANPTTELGRLRLSAEKG 199 (364)
Q Consensus 126 ~~~~~~~~~~~~~~~------~~~~~~~l~~a~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~~sK~~~E~~ 199 (364)
|+++..... ..+. ......++++++...++ +|||+||.++|+.....+++|+.+..|.+.|+.+|.++|.+
T Consensus 121 h~A~~~~~~--~~~~~~~~~~n~~~~~~ll~a~~~~~~-r~V~~SS~~v~g~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~ 197 (357)
T 2x6t_A 121 HEGACSSTT--EWDGKYMMDNNYQYSKELLHYCLEREI-PFLYASSAATYGGRTSDFIESREYEKPLNVFGYSKFLFDEY 197 (357)
T ss_dssp ECCSCCCTT--CCCHHHHHHHTHHHHHHHHHHHHHHTC-CEEEEEEGGGGCSCSSCCCSSGGGCCCSSHHHHHHHHHHHH
T ss_pred ECCcccCCc--cCCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEcchHHhCCCCCCCcCCcCCCCCCChhHHHHHHHHHH
Confidence 999865431 1222 22345688888887788 99999999999987777899999999999999999999999
Q ss_pred HHHhhhhcCCcEEEEEecceecCCCC-------hHHHHHHhcCcc-cccccccCCc-ccccccHHHHHHHHHHHccCCCC
Q 017914 200 WLNLGRDLGISAQVFRLGGIYGPGRS-------SVDTIIKQLPLS-EGQKMRRARQ-YTSRIHVDDICQVLSASIDKPSA 270 (364)
Q Consensus 200 ~~~~~~~~~~~~~ilRp~~v~g~~~~-------~~~~~~~~~~~~-~~~~~~~~~~-~~~~i~v~Dva~~~~~~l~~~~~ 270 (364)
++.++++.+++++++||+.+||++.. .+..+....... .....+.+.+ .++|+|++|+|++++.+++++.
T Consensus 198 ~~~~~~~~g~~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~ai~~~~~~~~- 276 (357)
T 2x6t_A 198 VRQILPEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLWFLENGV- 276 (357)
T ss_dssp HHHHGGGCSSCEEEEEECEEESSSCTTCGGGSCHHHHHHHHHHTTCCCEEETTGGGCEECEEEHHHHHHHHHHHHHHCC-
T ss_pred HHHHHHHcCCCEEEEecCeEECCCCCCCcccchHHHHHHHHHHcCCCcEEeCCCCcceEccEEHHHHHHHHHHHHhcCC-
Confidence 99998888999999999999998743 344443321111 1112345677 8899999999999999998777
Q ss_pred CceEEEeCCCCCCHHHHHHHHHHHhcCCCCC-cccCCCCCCCCCCCccCCCCCCCeEEEchhHHHhcCc-ccCCCCHHHH
Q 017914 271 WNVYNVVDDDPAPREEVFAYAWDLVEKKWPG-LLKHRKPRENTESSNEKGSSRGEKRVSNVRMKKELGV-RLWHPSYKSG 348 (364)
Q Consensus 271 g~~~~i~~~~~~s~~el~~~i~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~-~p~~~~~~e~ 348 (364)
+++||+++++.+|+.|+++.+.+.+|.+ +. ....+ ............+|++|+++ ||| .|.+ +++|+
T Consensus 277 ~~~~~i~~~~~~s~~e~~~~i~~~~g~~-~~~~~~~~--------~~~~~~~~~~~~~~~~k~~~-lG~~~~~~-~l~e~ 345 (357)
T 2x6t_A 277 SGIFNLGTGRAESFQAVADATLAYHKKG-QIEYIPFP--------DKLKGRYQAFTQADLTNLRA-AGYDKPFK-TVAEG 345 (357)
T ss_dssp CEEEEESCSCCEEHHHHHHHHHHHHTCC-CCEEECCC--------GGGTTSCCSBCCCCCHHHHH-TTCCCCCC-CHHHH
T ss_pred CCeEEecCCCcccHHHHHHHHHHHcCCC-CceecCCC--------cccccccccccccCHHHHHH-cCCCCCCC-CHHHH
Confidence 8899999999999999999999999976 21 11110 00111223446789999975 999 6777 89999
Q ss_pred HHHHHHHhccc
Q 017914 349 LQSIINQMDQP 359 (364)
Q Consensus 349 l~~~~~~~~~~ 359 (364)
|+++++|++++
T Consensus 346 l~~~~~~~~~~ 356 (357)
T 2x6t_A 346 VTEYMAWLNRD 356 (357)
T ss_dssp HHHHHHHHC--
T ss_pred HHHHHHHHhhc
Confidence 99999999875
|
| >2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-38 Score=286.29 Aligned_cols=281 Identities=16% Similarity=0.150 Sum_probs=216.0
Q ss_pred ccCCCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhh-hh-CCceEEEccCChhhH--Hhhc--cCceeeE
Q 017914 54 SEWQSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKEL-EQ-SGFDVHLFNANETAL--MILT--TLKNYTH 126 (364)
Q Consensus 54 ~~~~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l-~~-~~~~~~~~D~~~~~~--~~~~--~~d~v~~ 126 (364)
+....+|+||||| +||||++|+++|+++|++|++++|+......+ .. .++.++.+|++|.+. ..++ ++|+|+|
T Consensus 15 ~~~~~~~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~l~~v~~~~~Dl~d~~~~~~~~~~~~~D~vih 94 (330)
T 2pzm_A 15 VPRGSHMRILITGGAGCLGSNLIEHWLPQGHEILVIDNFATGKREVLPPVAGLSVIEGSVTDAGLLERAFDSFKPTHVVH 94 (330)
T ss_dssp CSTTTCCEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCSSSCGGGSCSCTTEEEEECCTTCHHHHHHHHHHHCCSEEEE
T ss_pred cccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCccchhhhhccCCceEEEeeCCCHHHHHHHHhhcCCCEEEE
Confidence 3456678999999 99999999999999999999999965432211 11 468899999999774 5666 8999999
Q ss_pred EEEecCCCCCCCC----hhhhHHHHHHHHhhcCCccEEEEEccceeecCCCCc--cccCCCCCCCCChhHHHHHHHHHHH
Q 017914 127 LLVSIPPLEGTGD----PMLKHGELLRSTLMNGHLQWLGYLSSTGVYGHSGGA--WVDEDYPANPTTELGRLRLSAEKGW 200 (364)
Q Consensus 127 ~~~~~~~~~~~~~----~~~~~~~~l~~a~~~~~~~r~v~~Ss~~vy~~~~~~--~~~E~~~~~~~~~Y~~sK~~~E~~~ 200 (364)
+++..... ...+ .......++++++.+.++++|||+||.++|+..... +++|++ .+.+.|+.+|.++|.++
T Consensus 95 ~A~~~~~~-~~~~~~~~~N~~~~~~l~~a~~~~~~~~iV~~SS~~~~~~~~~~~~~~~E~~--~~~~~Y~~sK~~~e~~~ 171 (330)
T 2pzm_A 95 SAAAYKDP-DDWAEDAATNVQGSINVAKAASKAGVKRLLNFQTALCYGRPATVPIPIDSPT--APFTSYGISKTAGEAFL 171 (330)
T ss_dssp CCCCCSCT-TCHHHHHHHHTHHHHHHHHHHHHHTCSEEEEEEEGGGGCSCSSSSBCTTCCC--CCCSHHHHHHHHHHHHH
T ss_pred CCccCCCc-cccChhHHHHHHHHHHHHHHHHHcCCCEEEEecCHHHhCCCccCCCCcCCCC--CCCChHHHHHHHHHHHH
Confidence 99865432 1111 123445678888887788999999999999866544 788877 67789999999999999
Q ss_pred HHhhhhcCCcEEEEEecceecCCC--ChHHHHHHhcCcccccccccCCcccccccHHHHHH-HHHHHccCCCCCceEEEe
Q 017914 201 LNLGRDLGISAQVFRLGGIYGPGR--SSVDTIIKQLPLSEGQKMRRARQYTSRIHVDDICQ-VLSASIDKPSAWNVYNVV 277 (364)
Q Consensus 201 ~~~~~~~~~~~~ilRp~~v~g~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~-~~~~~l~~~~~g~~~~i~ 277 (364)
+.+ +++++++||+++||++. ..+..+........ ..++.+. .++|+|++|+|+ +++.+++++. |++||++
T Consensus 172 ~~~----~~~~~~iR~~~v~gp~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~i~~~Dva~~a~~~~~~~~~-g~~~~v~ 244 (330)
T 2pzm_A 172 MMS----DVPVVSLRLANVTGPRLAIGPIPTFYKRLKAGQ-KCFCSDT-VRDFLDMSDFLAIADLSLQEGRP-TGVFNVS 244 (330)
T ss_dssp HTC----SSCEEEEEECEEECTTCCSSHHHHHHHHHHTTC-CCCEESC-EECEEEHHHHHHHHHHHTSTTCC-CEEEEES
T ss_pred HHc----CCCEEEEeeeeeECcCCCCCHHHHHHHHHHcCC-EEeCCCC-EecceeHHHHHHHHHHHHhhcCC-CCEEEeC
Confidence 865 78999999999999985 34444333211111 2334455 789999999999 9999998876 8999999
Q ss_pred CCCCCCHHHHHHHHHHHhcCCCCCcccCCCCCCCCCCCccCCCCCCCeEEEchhH-----HHhcCcccCCCCHHHHHHHH
Q 017914 278 DDDPAPREEVFAYAWDLVEKKWPGLLKHRKPRENTESSNEKGSSRGEKRVSNVRM-----KKELGVRLWHPSYKSGLQSI 352 (364)
Q Consensus 278 ~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~-----~~~lG~~p~~~~~~e~l~~~ 352 (364)
+++.+|+.|+++.+.+.+|.+ +.. .. +.. . ......+|++|+ ++ |||+|++ +++|+|+++
T Consensus 245 ~~~~~s~~e~~~~i~~~~g~~-~~~-~~------~~~----~-~~~~~~~d~~k~~~~~l~~-lG~~p~~-~~~~~l~~~ 309 (330)
T 2pzm_A 245 TGEGHSIKEVFDVVLDYVGAT-LAE-PV------PVV----A-PGADDVPSVVLDPSKTETE-FGWKAKV-DFKDTITGQ 309 (330)
T ss_dssp CSCCEEHHHHHHHHHHHHTCC-CSS-CC------CEE----C-CCTTSCSEECBCCHHHHHH-HCCCCCC-CHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHhCCC-Cce-eC------CCC----c-chhhccCCHHHHhhchHHH-cCCcccC-CHHHHHHHH
Confidence 999999999999999999986 321 11 000 1 234567788888 76 9999998 899999999
Q ss_pred HHHhccc
Q 017914 353 INQMDQP 359 (364)
Q Consensus 353 ~~~~~~~ 359 (364)
++|++++
T Consensus 310 ~~~~~~~ 316 (330)
T 2pzm_A 310 LAWYDKY 316 (330)
T ss_dssp HHHHHHH
T ss_pred HHHHHhh
Confidence 9999864
|
| >1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.6e-39 Score=297.40 Aligned_cols=292 Identities=14% Similarity=0.138 Sum_probs=216.0
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhh-----------------h------hhhCCceEEEccCCh
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKK-----------------E------LEQSGFDVHLFNANE 112 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-----------------~------l~~~~~~~~~~D~~~ 112 (364)
..+++||||| +||||++|+++|+++|++|++++|...... . +...++.++.+|++|
T Consensus 9 ~~~~~vlVTG~tGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~~Dl~d 88 (404)
T 1i24_A 9 HHGSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDICD 88 (404)
T ss_dssp ---CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCTTS
T ss_pred cCCCeEEEeCCCcHHHHHHHHHHHhCCCeEEEEEecCccccccccccccccccchhhhhhhhHhhccCCceEEEECCCCC
Confidence 4568999999 999999999999999999999998643211 1 112578899999999
Q ss_pred hhH--Hhhcc--CceeeEEEEecCCCCCCCCh---------hhhHHHHHHHHhhcCCc-cEEEEEccceeecCCCCcccc
Q 017914 113 TAL--MILTT--LKNYTHLLVSIPPLEGTGDP---------MLKHGELLRSTLMNGHL-QWLGYLSSTGVYGHSGGAWVD 178 (364)
Q Consensus 113 ~~~--~~~~~--~d~v~~~~~~~~~~~~~~~~---------~~~~~~~l~~a~~~~~~-~r~v~~Ss~~vy~~~~~~~~~ 178 (364)
.+. .++.+ +|+|+|+|+.........++ ......++++++...++ ++|||+||.++|+... .+++
T Consensus 89 ~~~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~~~~V~~SS~~vyg~~~-~~~~ 167 (404)
T 1i24_A 89 FEFLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFGEECHLVKLGTMGEYGTPN-IDIE 167 (404)
T ss_dssp HHHHHHHHHHHCCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGGCCCS-SCBC
T ss_pred HHHHHHHHhccCCCEEEECCCCCCccchhhCccchhhhHHHHHHHHHHHHHHHHHhCCCcEEEEeCcHHHhCCCC-CCCC
Confidence 764 55666 99999999754321111222 23345678888877777 5999999999998654 3566
Q ss_pred CC--------------CCCCCCChhHHHHHHHHHHHHHhhhhcCCcEEEEEecceecCCC--------------------
Q 017914 179 ED--------------YPANPTTELGRLRLSAEKGWLNLGRDLGISAQVFRLGGIYGPGR-------------------- 224 (364)
Q Consensus 179 E~--------------~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilRp~~v~g~~~-------------------- 224 (364)
|+ .+..|.+.|+.+|.++|.+++.+++..+++++++||+.+||++.
T Consensus 168 E~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~gi~~~ivrp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~ 247 (404)
T 1i24_A 168 EGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVKTDETEMHEELRNRLDYDAVFG 247 (404)
T ss_dssp SSEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECSCCTTGGGSGGGCCCCCCSTTTC
T ss_pred ccccccccccccccccCCCCCCChhHHHHHHHHHHHHHHHHhcCCeEEEEecceeeCCCCCccccccccccccccccchh
Confidence 65 46678899999999999999998877899999999999999974
Q ss_pred ChHHHHHHhcCcccc-cccccCCcccccccHHHHHHHHHHHccCCCC-C--ceEEEeCCCCCCHHHHHHHHHHH---hcC
Q 017914 225 SSVDTIIKQLPLSEG-QKMRRARQYTSRIHVDDICQVLSASIDKPSA-W--NVYNVVDDDPAPREEVFAYAWDL---VEK 297 (364)
Q Consensus 225 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~~-g--~~~~i~~~~~~s~~el~~~i~~~---~g~ 297 (364)
..+..++........ ...+++.+.++|||++|+|++++.+++++.. | ++||+++ +++|+.|+++.+.+. +|.
T Consensus 248 ~~~~~~~~~~~~g~~~~~~g~g~~~~~~i~v~Dva~a~~~~l~~~~~~g~~~~yni~~-~~~s~~e~~~~i~~~~~~~g~ 326 (404)
T 1i24_A 248 TALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVEIAIANPAKAGEFRVFNQFT-EQFSVNELASLVTKAGSKLGL 326 (404)
T ss_dssp CHHHHHHHHHHHTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHSCCCTTCEEEEEECS-EEEEHHHHHHHHHHHHHTTTC
T ss_pred hHHHHHHHHHHcCCeeEEeCCCCceECcEEHHHHHHHHHHHHhCcccCCCceEEEECC-CCCcHHHHHHHHHHHHHhhCC
Confidence 233444332111111 1336677889999999999999999987653 6 6999988 789999999999998 676
Q ss_pred CCCCcccCCCCCCCCCCCccCCCCCCCeEEEchhHHHhcCcccCCCCHHHHHHHHHHHhcccCC
Q 017914 298 KWPGLLKHRKPRENTESSNEKGSSRGEKRVSNVRMKKELGVRLWHPSYKSGLQSIINQMDQPYQ 361 (364)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~e~l~~~~~~~~~~~~ 361 (364)
+.+. ...+. . ..........+|++|++ +|||+|++ +++++++++++|++.+.+
T Consensus 327 ~~~~-~~~p~------~--~~~~~~~~~~~d~~k~~-~LG~~p~~-~~~~~l~~~~~~~~~~~~ 379 (404)
T 1i24_A 327 DVKK-MTVPN------P--RVEAEEHYYNAKHTKLM-ELGLEPHY-LSDSLLDSLLNFAVQFKD 379 (404)
T ss_dssp CCCE-EEECC------S--SCSCSSCCCCBCCCHHH-HTTCCCCC-CCHHHHHHHHHHHHHTGG
T ss_pred Cccc-cccCc------c--cCccccceEecCHHHHH-HcCCCcCc-CHHHHHHHHHHHHHhhhh
Confidence 6331 11110 0 01112234567999997 79999998 899999999999876543
|
| >1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.7e-39 Score=296.16 Aligned_cols=292 Identities=12% Similarity=0.101 Sum_probs=220.1
Q ss_pred CCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchh-----hhhhhh------C-CceEEEccCChhhH--Hhhcc--C
Q 017914 59 PNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMK-----KKELEQ------S-GFDVHLFNANETAL--MILTT--L 121 (364)
Q Consensus 59 ~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~-----~~~l~~------~-~~~~~~~D~~~~~~--~~~~~--~ 121 (364)
+|+||||| +||||++|+++|+++|++|++++|+..+ ...+.. . ++.++.+|++|.+. .++++ +
T Consensus 28 ~k~vlVtGatG~IG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~ 107 (381)
T 1n7h_A 28 RKIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVIKP 107 (381)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHHCC
T ss_pred CCeEEEEcCCchHHHHHHHHHHHCCCEEEEEecCCccccchhhhhhhhccccccccceEEEECCCCCHHHHHHHHHhcCC
Confidence 37999999 9999999999999999999999997654 222211 2 68899999999764 55554 6
Q ss_pred ceeeEEEEecCCCCCCCCh------hhhHHHHHHHHhhcCCcc-----EEEEEccceeecCCCCccccCCCCCCCCChhH
Q 017914 122 KNYTHLLVSIPPLEGTGDP------MLKHGELLRSTLMNGHLQ-----WLGYLSSTGVYGHSGGAWVDEDYPANPTTELG 190 (364)
Q Consensus 122 d~v~~~~~~~~~~~~~~~~------~~~~~~~l~~a~~~~~~~-----r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~ 190 (364)
|+|+|+++.........+. ......++++++...+++ +|||+||.++||.... +++|+++..|.+.|+
T Consensus 108 d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~~~~~~v~~SS~~vyg~~~~-~~~E~~~~~~~~~Y~ 186 (381)
T 1n7h_A 108 DEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGSTPP-PQSETTPFHPRSPYA 186 (381)
T ss_dssp SEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGTTSCS-SBCTTSCCCCCSHHH
T ss_pred CEEEECCcccCccccccCHHHHHHHHHHHHHHHHHHHHHhCCccCCccEEEEeCcHHHhCCCCC-CCCCCCCCCCCCchH
Confidence 9999999754321001111 223456788888776666 9999999999997766 899999999999999
Q ss_pred HHHHHHHHHHHHhhhhcCCcEEEEEecceecCCCC--hH----HHHHHhcCcc--cccccccCCcccccccHHHHHHHHH
Q 017914 191 RLRLSAEKGWLNLGRDLGISAQVFRLGGIYGPGRS--SV----DTIIKQLPLS--EGQKMRRARQYTSRIHVDDICQVLS 262 (364)
Q Consensus 191 ~sK~~~E~~~~~~~~~~~~~~~ilRp~~v~g~~~~--~~----~~~~~~~~~~--~~~~~~~~~~~~~~i~v~Dva~~~~ 262 (364)
.+|..+|.+++.++.+.+++++++|++++||++.. ++ ..++...... .....+.+.+.++|+|++|+|++++
T Consensus 187 ~sK~~~E~~~~~~~~~~~~~~~~~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~v~v~Dva~a~~ 266 (381)
T 1n7h_A 187 ASKCAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRALGRIKVGLQTKLFLGNLQASRDWGFAGDYVEAMW 266 (381)
T ss_dssp HHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCCCEEESCTTCEEECEEHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhCCcEEEEEeCceeCCCCCCcchhHHHHHHHHHHHcCCCCeEEeCCCCceeeeEEHHHHHHHHH
Confidence 99999999999998888999999999999998743 22 2222110001 1112356778899999999999999
Q ss_pred HHccCCCCCceEEEeCCCCCCHHHHHHHHHHHhcCCCCCcccCCCCCCCCCCCccCCCCCCCeEEEchhHHHhcCcccCC
Q 017914 263 ASIDKPSAWNVYNVVDDDPAPREEVFAYAWDLVEKKWPGLLKHRKPRENTESSNEKGSSRGEKRVSNVRMKKELGVRLWH 342 (364)
Q Consensus 263 ~~l~~~~~g~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~ 342 (364)
.+++++. +++||+++++.+|+.|+++.+.+.+|.+.+..+... . ............+|++|++++|||+|++
T Consensus 267 ~~~~~~~-~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~-----~--~~~~~~~~~~~~~d~~k~~~~lG~~p~~ 338 (381)
T 1n7h_A 267 LMLQQEK-PDDYVVATEEGHTVEEFLDVSFGYLGLNWKDYVEID-----Q--RYFRPAEVDNLQGDASKAKEVLGWKPQV 338 (381)
T ss_dssp HHHTSSS-CCEEEECCSCEEEHHHHHHHHHHHTTCCGGGTEEEC-----G--GGSCSSCCCBCCBCCHHHHHHHCCCCCS
T ss_pred HHHhCCC-CCeEEeeCCCCCcHHHHHHHHHHHcCCCcccccccC-----c--ccCCccccccccCCHHHHHHhcCCcccC
Confidence 9998765 479999999999999999999999997632111110 0 0001112234567999999999999998
Q ss_pred CCHHHHHHHHHHHhcccC
Q 017914 343 PSYKSGLQSIINQMDQPY 360 (364)
Q Consensus 343 ~~~~e~l~~~~~~~~~~~ 360 (364)
+++|+|+++++|++++.
T Consensus 339 -~l~e~l~~~~~~~~~~~ 355 (381)
T 1n7h_A 339 -GFEKLVKMMVDEDLELA 355 (381)
T ss_dssp -CHHHHHHHHHHHHHHHH
T ss_pred -CHHHHHHHHHHHHHhhc
Confidence 89999999999998765
|
| >2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-38 Score=288.67 Aligned_cols=301 Identities=12% Similarity=0.036 Sum_probs=222.5
Q ss_pred CCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhh--hhhh----CCceEEEccCChhhH--Hhhcc--CceeeEE
Q 017914 59 PNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKK--ELEQ----SGFDVHLFNANETAL--MILTT--LKNYTHL 127 (364)
Q Consensus 59 ~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~--~l~~----~~~~~~~~D~~~~~~--~~~~~--~d~v~~~ 127 (364)
+|+||||| +||||++|+++|+++|++|++++|+..+.. .+.. .++.++.+|++|.+. ..+++ +|+|+|+
T Consensus 3 ~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~ 82 (345)
T 2z1m_A 3 GKRALITGIRGQDGAYLAKLLLEKGYEVYGADRRSGEFASWRLKELGIENDVKIIHMDLLEFSNIIRTIEKVQPDEVYNL 82 (345)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCCSTTTTHHHHHTTCTTTEEECCCCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccccccHhhccccCceeEEECCCCCHHHHHHHHHhcCCCEEEEC
Confidence 58999999 999999999999999999999999865432 2221 368889999999764 45554 6999999
Q ss_pred EEecCCCCCCCCh------hhhHHHHHHHHhhcCCc-cEEEEEccceeecCCCCccccCCCCCCCCChhHHHHHHHHHHH
Q 017914 128 LVSIPPLEGTGDP------MLKHGELLRSTLMNGHL-QWLGYLSSTGVYGHSGGAWVDEDYPANPTTELGRLRLSAEKGW 200 (364)
Q Consensus 128 ~~~~~~~~~~~~~------~~~~~~~l~~a~~~~~~-~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~~sK~~~E~~~ 200 (364)
++.........+. +.....++++++...++ ++|||+||.++||.....+++|+.+..|.+.|+.+|.++|.++
T Consensus 83 A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~vyg~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~~ 162 (345)
T 2z1m_A 83 AAQSFVGVSFEQPILTAEVDAIGVLRILEALRTVKPDTKFYQASTSEMFGKVQEIPQTEKTPFYPRSPYAVAKLFGHWIT 162 (345)
T ss_dssp CCCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHHHHHHHHHHHH
T ss_pred CCCcchhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEEechhhcCCCCCCCCCccCCCCCCChhHHHHHHHHHHH
Confidence 9754321111222 22335677888777676 8999999999999887778999999889999999999999999
Q ss_pred HHhhhhcCCcEEEEEecceecCCCC--hHHH----HHHhcCcc--cccccccCCcccccccHHHHHHHHHHHccCCCCCc
Q 017914 201 LNLGRDLGISAQVFRLGGIYGPGRS--SVDT----IIKQLPLS--EGQKMRRARQYTSRIHVDDICQVLSASIDKPSAWN 272 (364)
Q Consensus 201 ~~~~~~~~~~~~ilRp~~v~g~~~~--~~~~----~~~~~~~~--~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~~g~ 272 (364)
+.++.+.+++++++|+.++||++.. .+.. +....... .....+.+.+.++|+|++|+|++++.+++++. ++
T Consensus 163 ~~~~~~~~~~~~~~r~~~~~gpg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~Dva~a~~~~~~~~~-~~ 241 (345)
T 2z1m_A 163 VNYREAYNMFACSGILFNHESPLRGIEFVTRKITYSLARIKYGLQDKLVLGNLNAKRDWGYAPEYVEAMWLMMQQPE-PD 241 (345)
T ss_dssp HHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEECCEEHHHHHHHHHHHHTSSS-CC
T ss_pred HHHHHHhCCceEeeeeeeecCCCCCCcchhHHHHHHHHHHHcCCCCeeeeCCCCceeeeEEHHHHHHHHHHHHhCCC-Cc
Confidence 9998888999999999999999743 2211 11110001 11123556778899999999999999998765 46
Q ss_pred eEEEeCCCCCCHHHHHHHHHHHhcCCCCCc---ccCCCC--CCC----CCCC-ccCCCCCCCeEEEchhHHHhcCcccCC
Q 017914 273 VYNVVDDDPAPREEVFAYAWDLVEKKWPGL---LKHRKP--REN----TESS-NEKGSSRGEKRVSNVRMKKELGVRLWH 342 (364)
Q Consensus 273 ~~~i~~~~~~s~~el~~~i~~~~g~~~~~~---~~~~~~--~~~----~~~~-~~~~~~~~~~~~d~~k~~~~lG~~p~~ 342 (364)
+||+++++.+++.|+++.+.+.+|.+.+.. ++.... ... ...+ ...........+|++|++++|||+|++
T Consensus 242 ~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~ 321 (345)
T 2z1m_A 242 DYVIATGETHTVREFVEKAAKIAGFDIEWVGEGINEKGIDRNTGKVIVEVSEEFFRPAEVDILVGNPEKAMKKLGWKPRT 321 (345)
T ss_dssp CEEECCSCCEEHHHHHHHHHHHTTCCEEEESCGGGCEEEETTTCCEEEEECGGGSCSSCCCBCCBCCHHHHHHHCCCCCS
T ss_pred eEEEeCCCCccHHHHHHHHHHHhCCCccccccccccccccccccccccccCcccCCCCCcceeecCHHHHHHHcCCcccC
Confidence 999999999999999999999999863211 000000 000 0000 011122344567999999999999998
Q ss_pred CCHHHHHHHHHHHhcccCC
Q 017914 343 PSYKSGLQSIINQMDQPYQ 361 (364)
Q Consensus 343 ~~~~e~l~~~~~~~~~~~~ 361 (364)
+++|+|+++++|++++..
T Consensus 322 -~~~~~l~~~~~~~~~~~~ 339 (345)
T 2z1m_A 322 -TFDELVEIMMEADLKRVR 339 (345)
T ss_dssp -CHHHHHHHHHHHHHHHHH
T ss_pred -CHHHHHHHHHHHHHHHhc
Confidence 899999999999987653
|
| >2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.8e-38 Score=282.95 Aligned_cols=279 Identities=16% Similarity=0.185 Sum_probs=194.0
Q ss_pred CCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCChhhH--Hhhcc--CceeeEEEEecC
Q 017914 58 SPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETAL--MILTT--LKNYTHLLVSIP 132 (364)
Q Consensus 58 ~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~--~~~~~--~d~v~~~~~~~~ 132 (364)
|+|+||||| +||||++|+++|+++|++|++++|+... .+ ++.+|++|++. ..+++ +|+|+|+++...
T Consensus 1 m~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~------~~--~~~~Dl~d~~~~~~~~~~~~~d~vih~A~~~~ 72 (315)
T 2ydy_A 1 MNRRVLVTGATGLLGRAVHKEFQQNNWHAVGCGFRRAR------PK--FEQVNLLDSNAVHHIIHDFQPHVIVHCAAERR 72 (315)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHTTTCEEEEEC--------------------------CHHHHHHHCCSEEEECC----
T ss_pred CCCeEEEECCCcHHHHHHHHHHHhCCCeEEEEccCCCC------CC--eEEecCCCHHHHHHHHHhhCCCEEEECCcccC
Confidence 358999999 9999999999999999999999987543 12 77899999764 55554 899999998654
Q ss_pred CCCC------CCChhhhHHHHHHHHhhcCCccEEEEEccceeecCCCCccccCCCCCCCCChhHHHHHHHHHHHHHhhhh
Q 017914 133 PLEG------TGDPMLKHGELLRSTLMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANPTTELGRLRLSAEKGWLNLGRD 206 (364)
Q Consensus 133 ~~~~------~~~~~~~~~~~l~~a~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~~sK~~~E~~~~~~~~~ 206 (364)
.... ..+.+.....++++++...++ +|||+||..+|+. ...+++|+++..|.+.|+.+|..+|.+++.+
T Consensus 73 ~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS~~v~~~-~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~--- 147 (315)
T 2ydy_A 73 PDVVENQPDAASQLNVDASGNLAKEAAAVGA-FLIYISSDYVFDG-TNPPYREEDIPAPLNLYGKTKLDGEKAVLEN--- 147 (315)
T ss_dssp ---------------CHHHHHHHHHHHHHTC-EEEEEEEGGGSCS-SSCSBCTTSCCCCCSHHHHHHHHHHHHHHHH---
T ss_pred hhhhhcCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEchHHHcCC-CCCCCCCCCCCCCcCHHHHHHHHHHHHHHHh---
Confidence 3211 112234556788888887776 8999999999987 4567999999899999999999999999875
Q ss_pred cCCcEEEEEecceecCCCC----hHHHHHHhcC-cccccccccCCcccccccHHHHHHHHHHHccCC----CCCceEEEe
Q 017914 207 LGISAQVFRLGGIYGPGRS----SVDTIIKQLP-LSEGQKMRRARQYTSRIHVDDICQVLSASIDKP----SAWNVYNVV 277 (364)
Q Consensus 207 ~~~~~~ilRp~~v~g~~~~----~~~~~~~~~~-~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~----~~g~~~~i~ 277 (364)
+++++++||+.+||+... ++..+..... .... ....+.+.++|+|++|+|++++.+++++ ..+++||++
T Consensus 148 -~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~i~ 225 (315)
T 2ydy_A 148 -NLGAAVLRIPILYGEVEKLEESAVTVMFDKVQFSNKS-ANMDHWQQRFPTHVKDVATVCRQLAEKRMLDPSIKGTFHWS 225 (315)
T ss_dssp -CTTCEEEEECSEECSCSSGGGSTTGGGHHHHHCCSSC-EEEECSSBBCCEEHHHHHHHHHHHHHHHHTCTTCCEEEECC
T ss_pred -CCCeEEEeeeeeeCCCCcccccHHHHHHHHHHhcCCC-eeeccCceECcEEHHHHHHHHHHHHHhhccccCCCCeEEEc
Confidence 467899999999998754 2322222211 1111 1113467789999999999999998753 557899999
Q ss_pred CCCCCCHHHHHHHHHHHhcCCCCCcccCCCCCCCCCCCccCCCCCCCeEEEchhHHHhcCcccCCCCHHHHHHHHHHHhc
Q 017914 278 DDDPAPREEVFAYAWDLVEKKWPGLLKHRKPRENTESSNEKGSSRGEKRVSNVRMKKELGVRLWHPSYKSGLQSIINQMD 357 (364)
Q Consensus 278 ~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~e~l~~~~~~~~ 357 (364)
+++.+|+.|+++.+.+.+|.+.+.....+. .+...........+|++|+++. ||+|++ +++|+|+++++|++
T Consensus 226 ~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~------~~~~~~~~~~~~~~d~~k~~~~-G~~p~~-~~~~~l~~~~~~~~ 297 (315)
T 2ydy_A 226 GNEQMTKYEMACAIADAFNLPSSHLRPITD------SPVLGAQRPRNAQLDCSKLETL-GIGQRT-PFRIGIKESLWPFL 297 (315)
T ss_dssp CSCCBCHHHHHHHHHHHTTCCCTTEEEECS------CCCSSSCCCSBCCBCCHHHHHT-TCCCCC-CHHHHHHHHHGGGC
T ss_pred CCCcccHHHHHHHHHHHhCCChhheecccc------ccccccCCCcccccchHHHHhc-CCCCCC-CHHHHHHHHHHHHc
Confidence 999999999999999999987432222211 0100112334577899999987 999999 69999999999999
Q ss_pred cc
Q 017914 358 QP 359 (364)
Q Consensus 358 ~~ 359 (364)
++
T Consensus 298 ~~ 299 (315)
T 2ydy_A 298 ID 299 (315)
T ss_dssp C-
T ss_pred cc
Confidence 87
|
| >1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-38 Score=284.46 Aligned_cols=276 Identities=13% Similarity=0.142 Sum_probs=209.4
Q ss_pred CeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCChhhH--Hhhcc--CceeeEEEEecCCC
Q 017914 60 NRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETAL--MILTT--LKNYTHLLVSIPPL 134 (364)
Q Consensus 60 ~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~--~~~~~--~d~v~~~~~~~~~~ 134 (364)
|+||||| +||||++|+++|+ +|++|++++|+.. ++.+|++|.+. ..+++ +|+|+|+++.....
T Consensus 1 m~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~~-----------~~~~D~~d~~~~~~~~~~~~~d~vih~a~~~~~~ 68 (299)
T 1n2s_A 1 MNILLFGKTGQVGWELQRSLA-PVGNLIALDVHSK-----------EFCGDFSNPKGVAETVRKLRPDVIVNAAAHTAVD 68 (299)
T ss_dssp CEEEEECTTSHHHHHHHHHTT-TTSEEEEECTTCS-----------SSCCCTTCHHHHHHHHHHHCCSEEEECCCCCCHH
T ss_pred CeEEEECCCCHHHHHHHHHhh-cCCeEEEeccccc-----------cccccCCCHHHHHHHHHhcCCCEEEECcccCCHh
Confidence 5899999 9999999999999 8999999999752 34689999764 55665 99999999754321
Q ss_pred CCCCCh------hhhHHHHHHHHhhcCCccEEEEEccceeecCCCCccccCCCCCCCCChhHHHHHHHHHHHHHhhhhcC
Q 017914 135 EGTGDP------MLKHGELLRSTLMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANPTTELGRLRLSAEKGWLNLGRDLG 208 (364)
Q Consensus 135 ~~~~~~------~~~~~~~l~~a~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~ 208 (364)
....++ ......+++++++..++ ||||+||.++|+.....+++|+++..|.+.|+.+|.++|+++++++.
T Consensus 69 ~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS~~vy~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~--- 144 (299)
T 1n2s_A 69 KAESEPELAQLLNATSVEAIAKAANETGA-WVVHYSTDYVFPGTGDIPWQETDATSPLNVYGKTKLAGEKALQDNCP--- 144 (299)
T ss_dssp HHTTCHHHHHHHHTHHHHHHHHHHTTTTC-EEEEEEEGGGSCCCTTCCBCTTSCCCCSSHHHHHHHHHHHHHHHHCS---
T ss_pred hhhcCHHHHHHHHHHHHHHHHHHHHHcCC-cEEEEecccEEeCCCCCCCCCCCCCCCccHHHHHHHHHHHHHHHhCC---
Confidence 111222 23446788888888887 79999999999987777899999999999999999999999987653
Q ss_pred CcEEEEEecceecCCCC-hHHHHHHhcCcccccccccCCcccccccHHHHHHHHHHHccCC--C--CCceEEEeCCCCCC
Q 017914 209 ISAQVFRLGGIYGPGRS-SVDTIIKQLPLSEGQKMRRARQYTSRIHVDDICQVLSASIDKP--S--AWNVYNVVDDDPAP 283 (364)
Q Consensus 209 ~~~~ilRp~~v~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~--~--~g~~~~i~~~~~~s 283 (364)
+++++||+.+||++.. ++..+......... ....+++.++|+|++|+|++++.+++++ . .+++||+++++.+|
T Consensus 145 -~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~~~~~~~~~~i~~~~~~s 222 (299)
T 1n2s_A 145 -KHLIFRTSWVYAGKGNNFAKTMLRLAKERQT-LSVINDQYGAPTGAELLADCTAHAIRVALNKPEVAGLYHLVAGGTTT 222 (299)
T ss_dssp -SEEEEEECSEECSSSCCHHHHHHHHHHHCSE-EEEECSCEECCEEHHHHHHHHHHHHHHHHHCGGGCEEEECCCBSCEE
T ss_pred -CeEEEeeeeecCCCcCcHHHHHHHHHhcCCC-EEeecCcccCCeeHHHHHHHHHHHHHHhccccccCceEEEeCCCCCC
Confidence 7999999999999754 44444332111111 1112347899999999999999999876 3 37899999999999
Q ss_pred HHHHHHHHHHHhcCCCC-----CcccCCCCCCCCCCCccCCCCCCCeEEEchhHHHhcCcccCCCCHHHHHHHHHHHhcc
Q 017914 284 REEVFAYAWDLVEKKWP-----GLLKHRKPRENTESSNEKGSSRGEKRVSNVRMKKELGVRLWHPSYKSGLQSIINQMDQ 358 (364)
Q Consensus 284 ~~el~~~i~~~~g~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~e~l~~~~~~~~~ 358 (364)
++|+++.+.+.+|.+.+ .....+. ...+ ..........+|++|++++|||+|+ +++|+|+++++|+++
T Consensus 223 ~~e~~~~i~~~~g~~~~~~~~~~~~~~~~----~~~~-~~~~~~~~~~~d~~k~~~~lG~~p~--~~~~~l~~~~~~~~~ 295 (299)
T 1n2s_A 223 WHDYAALVFDEARKAGITLALTELNAVPT----SAYP-TPASRPGNSRLNTEKFQRNFDLILP--QWELGVKRMLTEMFT 295 (299)
T ss_dssp HHHHHHHHHHHHHHHTCCCCCCEEEEECS----TTSC-CSSCCCSBCCBCCHHHHHHHTCCCC--BHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHhCCCcccccccccccccc----cccc-CcCCCCCceeeeHHHHHHhcCCCCC--CHHHHHHHHHHHHHh
Confidence 99999999999987632 1111100 0000 0112345578999999999999997 699999999999987
Q ss_pred cC
Q 017914 359 PY 360 (364)
Q Consensus 359 ~~ 360 (364)
+.
T Consensus 296 ~~ 297 (299)
T 1n2s_A 296 TT 297 (299)
T ss_dssp CC
T ss_pred cC
Confidence 53
|
| >1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-38 Score=280.20 Aligned_cols=272 Identities=14% Similarity=0.097 Sum_probs=206.4
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCChhhH--Hhhc--cCceeeEEEEec
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETAL--MILT--TLKNYTHLLVSI 131 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~--~~~~--~~d~v~~~~~~~ 131 (364)
...++||||| |||||++|+++|+++|++|++++|+ .+|++|.+. ..++ ++|+|+|+++..
T Consensus 10 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~---------------~~Dl~d~~~~~~~~~~~~~d~vih~A~~~ 74 (292)
T 1vl0_A 10 HHHMKILITGANGQLGREIQKQLKGKNVEVIPTDVQ---------------DLDITNVLAVNKFFNEKKPNVVINCAAHT 74 (292)
T ss_dssp --CEEEEEESTTSHHHHHHHHHHTTSSEEEEEECTT---------------TCCTTCHHHHHHHHHHHCCSEEEECCCCC
T ss_pred cccceEEEECCCChHHHHHHHHHHhCCCeEEeccCc---------------cCCCCCHHHHHHHHHhcCCCEEEECCccC
Confidence 3457999999 9999999999999999999999996 278888763 5555 799999999753
Q ss_pred CCCCCCCC------hhhhHHHHHHHHhhcCCccEEEEEccceeecCCCCccccCCCCCCCCChhHHHHHHHHHHHHHhhh
Q 017914 132 PPLEGTGD------PMLKHGELLRSTLMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANPTTELGRLRLSAEKGWLNLGR 205 (364)
Q Consensus 132 ~~~~~~~~------~~~~~~~~l~~a~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~~sK~~~E~~~~~~~~ 205 (364)
.......+ .+.....++++++...++ +|||+||.++|+.....+++|+++..|.+.|+.+|.++|.+++.++
T Consensus 75 ~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~-~iv~~SS~~v~~~~~~~~~~E~~~~~~~~~Y~~sK~~~E~~~~~~~- 152 (292)
T 1vl0_A 75 AVDKCEEQYDLAYKINAIGPKNLAAAAYSVGA-EIVQISTDYVFDGEAKEPITEFDEVNPQSAYGKTKLEGENFVKALN- 152 (292)
T ss_dssp CHHHHHHCHHHHHHHHTHHHHHHHHHHHHHTC-EEEEEEEGGGSCSCCSSCBCTTSCCCCCSHHHHHHHHHHHHHHHHC-
T ss_pred CHHHHhcCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEechHHeECCCCCCCCCCCCCCCCccHHHHHHHHHHHHHHhhC-
Confidence 32100011 122345688888887777 9999999999998777789999999999999999999999998764
Q ss_pred hcCCcEEEEEecceecCCCChHHHHHHhcCcccccccccCCcccccccHHHHHHHHHHHccCCCCCceEEEeCCCCCCHH
Q 017914 206 DLGISAQVFRLGGIYGPGRSSVDTIIKQLPLSEGQKMRRARQYTSRIHVDDICQVLSASIDKPSAWNVYNVVDDDPAPRE 285 (364)
Q Consensus 206 ~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~~g~~~~i~~~~~~s~~ 285 (364)
.+++++||+.+||+...++..+......... ....+++.++|+|++|+|++++.+++++ .+++||+++++.+|+.
T Consensus 153 ---~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~v~Dva~~~~~~~~~~-~~~~~~i~~~~~~s~~ 227 (292)
T 1vl0_A 153 ---PKYYIVRTAWLYGDGNNFVKTMINLGKTHDE-LKVVHDQVGTPTSTVDLARVVLKVIDEK-NYGTFHCTCKGICSWY 227 (292)
T ss_dssp ---SSEEEEEECSEESSSSCHHHHHHHHHHHCSE-EEEESSCEECCEEHHHHHHHHHHHHHHT-CCEEEECCCBSCEEHH
T ss_pred ---CCeEEEeeeeeeCCCcChHHHHHHHHhcCCc-EEeecCeeeCCccHHHHHHHHHHHHhcC-CCcEEEecCCCCccHH
Confidence 3699999999999955555444432111111 1112357789999999999999999876 7889999999999999
Q ss_pred HHHHHHHHHhcCCCCCcccCCCCCCCCCCCccCCCCCCCeEEEchhHHHhcCcccCCCCHHHHHHHHHHHhcc
Q 017914 286 EVFAYAWDLVEKKWPGLLKHRKPRENTESSNEKGSSRGEKRVSNVRMKKELGVRLWHPSYKSGLQSIINQMDQ 358 (364)
Q Consensus 286 el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~e~l~~~~~~~~~ 358 (364)
|+++.+.+.+|.+.+. ...+.. ..+. .........+|++|+++.|||+|+ +++|+|+++++||++
T Consensus 228 e~~~~i~~~~g~~~~~-~~~~~~----~~~~-~~~~~~~~~~d~~k~~~~lG~~p~--~~~~~l~~~~~~~~~ 292 (292)
T 1vl0_A 228 DFAVEIFRLTGIDVKV-TPCTTE----EFPR-PAKRPKYSVLRNYMLELTTGDITR--EWKESLKEYIDLLQM 292 (292)
T ss_dssp HHHHHHHHHHCCCCEE-EEECST----TSCC-SSCCCSBCCBCCHHHHHTTCCCCC--BHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHhCCCCce-eecccc----ccCc-ccCCCccccccHHHHHHHcCCCCC--CHHHHHHHHHHHhcC
Confidence 9999999999987321 111100 0000 112234577899999999999998 799999999999975
|
| >3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6e-38 Score=282.59 Aligned_cols=284 Identities=13% Similarity=0.142 Sum_probs=213.4
Q ss_pred eEEEEc-CChhhHHHHHHHHhC--CCEEEEEEeCchhhhhhhhCCceEEEccCChhhH--Hhhc--cCceeeEEEEecCC
Q 017914 61 RMLILG-MGFVGRIFAEKIKNQ--GWVVSGTCTNVMKKKELEQSGFDVHLFNANETAL--MILT--TLKNYTHLLVSIPP 133 (364)
Q Consensus 61 ~vlVtG-tG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~--~~~~--~~d~v~~~~~~~~~ 133 (364)
+||||| +||||++|+++|+++ |++|++++|+.... .++.++.+|++|++. ..++ ++|.|+|+++....
T Consensus 1 ~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~-----~~~~~~~~D~~d~~~~~~~~~~~~~d~vih~a~~~~~ 75 (317)
T 3ajr_A 1 MILVTGSSGQIGTELVPYLAEKYGKKNVIASDIVQRDT-----GGIKFITLDVSNRDEIDRAVEKYSIDAIFHLAGILSA 75 (317)
T ss_dssp CEEEESTTSTTHHHHHHHHHHHHCGGGEEEEESSCCCC-----TTCCEEECCTTCHHHHHHHHHHTTCCEEEECCCCCHH
T ss_pred CEEEEcCCcHHHHHHHHHHHHhcCCCEEEEecCCCccc-----cCceEEEecCCCHHHHHHHHhhcCCcEEEECCcccCC
Confidence 589999 999999999999998 89999999976543 257889999999764 5555 79999999975321
Q ss_pred CCCCCCh------hhhHHHHHHHHhhcCCccEEEEEccceeecCC-CCccccCCCCCCCCChhHHHHHHHHHHHHHhhhh
Q 017914 134 LEGTGDP------MLKHGELLRSTLMNGHLQWLGYLSSTGVYGHS-GGAWVDEDYPANPTTELGRLRLSAEKGWLNLGRD 206 (364)
Q Consensus 134 ~~~~~~~------~~~~~~~l~~a~~~~~~~r~v~~Ss~~vy~~~-~~~~~~E~~~~~~~~~Y~~sK~~~E~~~~~~~~~ 206 (364)
. ...++ +.....++++++++.++++|||+||.++|+.. ...+.+|+.+..|.+.|+.+|..+|.+++.++++
T Consensus 76 ~-~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~ 154 (317)
T 3ajr_A 76 K-GEKDPALAYKVNMNGTYNILEAAKQHRVEKVVIPSTIGVFGPETPKNKVPSITITRPRTMFGVTKIAAELLGQYYYEK 154 (317)
T ss_dssp H-HHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGCCTTSCSSSBCSSSCCCCCSHHHHHHHHHHHHHHHHHHH
T ss_pred c-cccChHHHhhhhhHHHHHHHHHHHHcCCCEEEEecCHHHhCCCCCCCCccccccCCCCchHHHHHHHHHHHHHHHHHh
Confidence 1 00111 22345688888888889999999999999865 3356788888889999999999999999998888
Q ss_pred cCCcEEEEEecceecCCC-------C-hHHHHHHhcCcccccccccCCcccccccHHHHHHHHHHHccCCC----CCceE
Q 017914 207 LGISAQVFRLGGIYGPGR-------S-SVDTIIKQLPLSEGQKMRRARQYTSRIHVDDICQVLSASIDKPS----AWNVY 274 (364)
Q Consensus 207 ~~~~~~ilRp~~v~g~~~-------~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~----~g~~~ 274 (364)
.+++++++||+.+||+.. . ....+.....-......+.+++.++|+|++|+|++++.+++++. .|++|
T Consensus 155 ~~~~~~~lR~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~~~~~~~~~g~~~ 234 (317)
T 3ajr_A 155 FGLDVRSLRYPGIISYKAEPTAGTTDYAVEIFYYAVKREKYKCYLAPNRALPMMYMPDALKALVDLYEADRDKLVLRNGY 234 (317)
T ss_dssp HCCEEEEEEECEEECSSSCCCSCSSTHHHHHHHHHHTTCCEEECSCTTCCEEEEEHHHHHHHHHHHHHCCGGGCSSCSCE
T ss_pred cCCeEEEEecCcEeccCCCCCCcchhHHHHHHHHHHhCCCceeecCccceeeeeEHHHHHHHHHHHHhCCccccccCceE
Confidence 899999999999999642 1 12222222111111223456788999999999999999998764 25899
Q ss_pred EEeCCCCCCHHHHHHHHHHHhcCCCCCcccCCCCCCCCCCCccCCCCCCCeEEEchhHHHhcCcccCCCCHHHHHHHHHH
Q 017914 275 NVVDDDPAPREEVFAYAWDLVEKKWPGLLKHRKPRENTESSNEKGSSRGEKRVSNVRMKKELGVRLWHPSYKSGLQSIIN 354 (364)
Q Consensus 275 ~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~e~l~~~~~ 354 (364)
|+++ ..+|+.|+++.+.+.+|.. + +.+. +..... ........+|++|++++|||+|++ +++|+|+++++
T Consensus 235 ~i~~-~~~s~~e~~~~i~~~~~~~-~--i~~~-----~~~~~~-~~~~~~~~~d~~k~~~~lG~~p~~-~~~~~l~~~~~ 303 (317)
T 3ajr_A 235 NVTA-YTFTPSELYSKIKERIPEF-E--IEYK-----EDFRDK-IAATWPESLDSSEASNEWGFSIEY-DLDRTIDDMID 303 (317)
T ss_dssp ECCS-EEECHHHHHHHHHTTCCSC-C--EEEC-----CCHHHH-HHTTSCSCBCCHHHHHHHCCCCCC-CHHHHHHHHHH
T ss_pred ecCC-ccccHHHHHHHHHHHCCcc-c--cccc-----cccchh-hccccccccCHHHHHHHcCCCCCC-CHHHHHHHHHH
Confidence 9986 5799999999999998732 1 1110 000000 001123568999999999999999 89999999999
Q ss_pred HhcccCC
Q 017914 355 QMDQPYQ 361 (364)
Q Consensus 355 ~~~~~~~ 361 (364)
|+++++.
T Consensus 304 ~~~~~~~ 310 (317)
T 3ajr_A 304 HISEKLG 310 (317)
T ss_dssp HHHHHTT
T ss_pred HHHhhhc
Confidence 9998764
|
| >3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-37 Score=297.57 Aligned_cols=286 Identities=14% Similarity=0.128 Sum_probs=212.0
Q ss_pred CCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCChhhHHhhccCceeeEEEEecCCCCCC
Q 017914 59 PNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETALMILTTLKNYTHLLVSIPPLEGT 137 (364)
Q Consensus 59 ~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~~~~~~~d~v~~~~~~~~~~~~~ 137 (364)
+|+||||| |||||++|++.|+++|++|++++|+..+. ..+.+|+.+.....+.++|+|+|+++........
T Consensus 147 ~m~VLVTGatG~IG~~l~~~L~~~G~~V~~l~R~~~~~--------~~v~~d~~~~~~~~l~~~D~Vih~A~~~~~~~~~ 218 (516)
T 3oh8_A 147 PLTVAITGSRGLVGRALTAQLQTGGHEVIQLVRKEPKP--------GKRFWDPLNPASDLLDGADVLVHLAGEPIFGRFN 218 (516)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSSCCT--------TCEECCTTSCCTTTTTTCSEEEECCCC-----CC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCc--------cceeecccchhHHhcCCCCEEEECCCCccccccc
Confidence 68999999 99999999999999999999999987653 2367788765446778999999999864332111
Q ss_pred C-C------hhhhHHHHHHHH-hhcCCccEEEEEccceeec-CCCCccccCCCCCCCCChhHHHHHHHHHHHHHhhhhcC
Q 017914 138 G-D------PMLKHGELLRST-LMNGHLQWLGYLSSTGVYG-HSGGAWVDEDYPANPTTELGRLRLSAEKGWLNLGRDLG 208 (364)
Q Consensus 138 ~-~------~~~~~~~~l~~a-~~~~~~~r~v~~Ss~~vy~-~~~~~~~~E~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~ 208 (364)
. . .+.....+++++ ++..++++|||+||.++|| .....+++|+.+. +.+.|+.+|...|.++.. +...|
T Consensus 219 ~~~~~~~~~~Nv~gt~~ll~a~a~~~~~~r~V~~SS~~vyg~~~~~~~~~E~~~~-~~~~y~~~~~~~E~~~~~-~~~~g 296 (516)
T 3oh8_A 219 DSHKEAIRESRVLPTKFLAELVAESTQCTTMISASAVGFYGHDRGDEILTEESES-GDDFLAEVCRDWEHATAP-ASDAG 296 (516)
T ss_dssp GGGHHHHHHHTHHHHHHHHHHHHHCSSCCEEEEEEEGGGGCSEEEEEEECTTSCC-CSSHHHHHHHHHHHTTHH-HHHTT
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEeCcceEecCCCCCCccCCCCCC-CcChHHHHHHHHHHHHHH-HHhCC
Confidence 1 1 123446788887 6677899999999999998 5555678998887 788999999999987654 44679
Q ss_pred CcEEEEEecceecCCCChHHHHHHhcCcccccccccCCcccccccHHHHHHHHHHHccCCCCCceEEEeCCCCCCHHHHH
Q 017914 209 ISAQVFRLGGIYGPGRSSVDTIIKQLPLSEGQKMRRARQYTSRIHVDDICQVLSASIDKPSAWNVYNVVDDDPAPREEVF 288 (364)
Q Consensus 209 ~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~~g~~~~i~~~~~~s~~el~ 288 (364)
++++++||+.+||++.+.+..+...........++++++.++|||++|+|++++.+++++..+++||+++++.+|+.|++
T Consensus 297 i~~~ilRp~~v~Gp~~~~~~~~~~~~~~g~~~~~g~g~~~~~~i~v~Dva~ai~~~l~~~~~~g~~ni~~~~~~s~~el~ 376 (516)
T 3oh8_A 297 KRVAFIRTGVALSGRGGMLPLLKTLFSTGLGGKFGDGTSWFSWIAIDDLTDIYYRAIVDAQISGPINAVAPNPVSNADMT 376 (516)
T ss_dssp CEEEEEEECEEEBTTBSHHHHHHHTTC---CCCCTTSCCEECEEEHHHHHHHHHHHHHCTTCCEEEEESCSCCEEHHHHH
T ss_pred CCEEEEEeeEEECCCCChHHHHHHHHHhCCCcccCCCCceEceEeHHHHHHHHHHHHhCcccCCcEEEECCCCCCHHHHH
Confidence 99999999999999987777776654444445667889999999999999999999998877779999999999999999
Q ss_pred HHHHHHhcCCCCCcccCCCCCCCCCCCcc--CCCCCCCeEEEchhHHHhcCcccCCCCHHHHHHHHHHHhc
Q 017914 289 AYAWDLVEKKWPGLLKHRKPRENTESSNE--KGSSRGEKRVSNVRMKKELGVRLWHPSYKSGLQSIINQMD 357 (364)
Q Consensus 289 ~~i~~~~g~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~d~~k~~~~lG~~p~~~~~~e~l~~~~~~~~ 357 (364)
+.+.+.+|.+.. +..+........... .........++++|++ +|||+|+||+++|+|++++++.+
T Consensus 377 ~~i~~~~g~~~~--~~~p~~~~~~~~g~~~~~~~~~~~~~~~~~kl~-~lG~~~~~~~l~e~l~~~l~~~~ 444 (516)
T 3oh8_A 377 KILATSMHRPAF--IQIPSLGPKILLGSQGAEELALASQRTAPAALE-NLSHTFRYTDIGAAIAHELGYEQ 444 (516)
T ss_dssp HHTTC-----------------------CCGGGGGGCEEEECCHHHH-HTTCCCSCSSHHHHHHHHHTCCC
T ss_pred HHHHHHhCCCCC--CCCCHHHHHHHhCCchhHHHhhcCCeechHHHH-HCCCCCCCCCHHHHHHHHhCccc
Confidence 999999998732 222111000011111 1223455678999997 79999999779999999998654
|
| >1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-37 Score=304.61 Aligned_cols=301 Identities=16% Similarity=0.152 Sum_probs=224.7
Q ss_pred CCCeEEEEc-CChhhHHHHHHHHhC-CCEEEEEEeCchhhhhh-hhCCceEEEccCChhh--H-HhhccCceeeEEEEec
Q 017914 58 SPNRMLILG-MGFVGRIFAEKIKNQ-GWVVSGTCTNVMKKKEL-EQSGFDVHLFNANETA--L-MILTTLKNYTHLLVSI 131 (364)
Q Consensus 58 ~~~~vlVtG-tG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~l-~~~~~~~~~~D~~~~~--~-~~~~~~d~v~~~~~~~ 131 (364)
++|+||||| +||||++|+++|+++ |++|++++|+......+ ...+++++.+|++|.+ . ..++++|+|+|+++..
T Consensus 314 ~~~~VLVTGatG~IG~~l~~~Ll~~~g~~V~~~~r~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~~~D~Vih~Aa~~ 393 (660)
T 1z7e_A 314 RRTRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPHFHFVEGDISIHSEWIEYHVKKCDVVLPLVAIA 393 (660)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHHHSSSEEEEEEESCCTTTGGGTTCTTEEEEECCTTTCHHHHHHHHHHCSEEEECCCCC
T ss_pred cCceEEEEcCCcHHHHHHHHHHHhcCCCEEEEEEcCchhhhhhccCCceEEEECCCCCcHHHHHHhhcCCCEEEECceec
Confidence 567999999 999999999999998 89999999987654433 2357899999999854 2 4667899999999754
Q ss_pred CCCCCCCCh------hhhHHHHHHHHhhcCCccEEEEEccceeecCCCCccccCCCCC-------CCCChhHHHHHHHHH
Q 017914 132 PPLEGTGDP------MLKHGELLRSTLMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPA-------NPTTELGRLRLSAEK 198 (364)
Q Consensus 132 ~~~~~~~~~------~~~~~~~l~~a~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~-------~~~~~Y~~sK~~~E~ 198 (364)
.......++ +.....++++++...+ +||||+||.++|+.....+++|+++. .|.+.|+.+|.++|.
T Consensus 394 ~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~-~r~V~~SS~~vyg~~~~~~~~E~~~~~~~~p~~~p~~~Y~~sK~~~E~ 472 (660)
T 1z7e_A 394 TPIEYTRNPLRVFELDFEENLRIIRYCVKYR-KRIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDR 472 (660)
T ss_dssp CTHHHHHSHHHHHHHHTHHHHHHHHHHHHTT-CEEEEECCGGGGBTCCSSSBCTTTCCEEECCTTCTTHHHHHHHHHHHH
T ss_pred CccccccCHHHHHHhhhHHHHHHHHHHHHhC-CEEEEEecHHHcCCCCCcccCCCccccccCcccCCCCCcHHHHHHHHH
Confidence 321111111 2234568888888877 89999999999998777778888753 456789999999999
Q ss_pred HHHHhhhhcCCcEEEEEecceecCCCC-----------hHHHHHHhcCccc-ccccccCCcccccccHHHHHHHHHHHcc
Q 017914 199 GWLNLGRDLGISAQVFRLGGIYGPGRS-----------SVDTIIKQLPLSE-GQKMRRARQYTSRIHVDDICQVLSASID 266 (364)
Q Consensus 199 ~~~~~~~~~~~~~~ilRp~~v~g~~~~-----------~~~~~~~~~~~~~-~~~~~~~~~~~~~i~v~Dva~~~~~~l~ 266 (364)
+++.++++.+++++++||+++||++.. .+..+........ ....+.+++.++|+|++|+|++++.+++
T Consensus 473 ~~~~~~~~~gi~~~ilRpg~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~g~~~~~~i~v~Dva~ai~~~l~ 552 (660)
T 1z7e_A 473 VIWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEALYRIIE 552 (660)
T ss_dssp HHHHHHHHHCCCEEEEEECSEESTTSSCHHHHTTTCSCHHHHHHHHHHHTCCEEEEGGGCCEEECEEHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCEEEECCCcccCCCccccccccccccchHHHHHHHHHcCCCcEEeCCCCeEEEEEEHHHHHHHHHHHHh
Confidence 999988778999999999999998753 2333332211111 1123556788999999999999999998
Q ss_pred CCC---CCceEEEeCCC-CCCHHHHHHHHHHHhcCCCCCcccCCCCCC--CCCC-Ccc--CCCCCCCeEEEchhHHHhcC
Q 017914 267 KPS---AWNVYNVVDDD-PAPREEVFAYAWDLVEKKWPGLLKHRKPRE--NTES-SNE--KGSSRGEKRVSNVRMKKELG 337 (364)
Q Consensus 267 ~~~---~g~~~~i~~~~-~~s~~el~~~i~~~~g~~~~~~~~~~~~~~--~~~~-~~~--~~~~~~~~~~d~~k~~~~lG 337 (364)
++. .|++||+++++ .+|+.|+++.+.+.+|.+.+ ....+.... .... ... .........+|++|++++||
T Consensus 553 ~~~~~~~g~~~ni~~~~~~~s~~el~~~i~~~~g~~~~-~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ka~~~LG 631 (660)
T 1z7e_A 553 NAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPL-RHHFPPFAGFRVVESSSYYGKGYQDVEHRKPSIRNAHRCLD 631 (660)
T ss_dssp CGGGTTTTEEEEECCGGGEEEHHHHHHHHHHHHHHCTT-GGGSCCCCCEEEECTHHHHCTTCCCCSCCCBCCHHHHHHHC
T ss_pred CccccCCCeEEEECCCCCCcCHHHHHHHHHHHhcCCCc-ccccCccccccchhccccccccccchhhcccCHHHHHHhcC
Confidence 764 57899999986 89999999999999987522 111211000 0000 000 00123456789999999999
Q ss_pred cccCCCCHHHHHHHHHHHhcccCC
Q 017914 338 VRLWHPSYKSGLQSIINQMDQPYQ 361 (364)
Q Consensus 338 ~~p~~~~~~e~l~~~~~~~~~~~~ 361 (364)
|+|++ +++|+|+++++|++++.+
T Consensus 632 ~~p~~-~l~egl~~~i~~~~~~~~ 654 (660)
T 1z7e_A 632 WEPKI-DMQETIDETLDFFLRTVD 654 (660)
T ss_dssp CCCCC-CHHHHHHHHHHHHHTTSC
T ss_pred CCccC-cHHHHHHHHHHHHHhhcc
Confidence 99999 899999999999998774
|
| >1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=9.1e-37 Score=302.71 Aligned_cols=292 Identities=13% Similarity=0.078 Sum_probs=217.2
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhh----hh---hhhCCceEEEccCChhhH--Hhhc--cCcee
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKK----KE---LEQSGFDVHLFNANETAL--MILT--TLKNY 124 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~----~~---l~~~~~~~~~~D~~~~~~--~~~~--~~d~v 124 (364)
.++|+||||| +||||++|+++|+++|++|++++|+.... .. +...++.++.+|++|++. .+++ ++|+|
T Consensus 9 ~~~~~ilVTGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~v~~v~~Dl~d~~~l~~~~~~~~~D~V 88 (699)
T 1z45_A 9 STSKIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCDRKGLEKVFKEYKIDSV 88 (699)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHHTSCCCEEECCTTCHHHHHHHHHHSCCCEE
T ss_pred cCCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCcchHHHHHHHhhccCCceEEEEcCCCCHHHHHHHHHhCCCCEE
Confidence 4568999999 99999999999999999999999965431 11 223578899999999764 5555 79999
Q ss_pred eEEEEecCCCCCCCC------hhhhHHHHHHHHhhcCCccEEEEEccceeecCCC----CccccCCCCCCCCChhHHHHH
Q 017914 125 THLLVSIPPLEGTGD------PMLKHGELLRSTLMNGHLQWLGYLSSTGVYGHSG----GAWVDEDYPANPTTELGRLRL 194 (364)
Q Consensus 125 ~~~~~~~~~~~~~~~------~~~~~~~~l~~a~~~~~~~r~v~~Ss~~vy~~~~----~~~~~E~~~~~~~~~Y~~sK~ 194 (364)
+|+|+.......... .......++++++++.++++|||+||.++|+... ..+++|+.+..|.+.|+.+|.
T Consensus 89 ih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~~iV~~SS~~vyg~~~~~~~~~~~~E~~~~~p~~~Y~~sK~ 168 (699)
T 1z45_A 89 IHFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQYNVSKFVFSSSATVYGDATRFPNMIPIPEECPLGPTNPYGHTKY 168 (699)
T ss_dssp EECCSCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCCGGGSTTCCSBCTTSCCCCCSHHHHHHH
T ss_pred EECCcccCcCccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECcHHHhCCCccccccCCccccCCCCCCChHHHHHH
Confidence 999975432110011 1223456788888877899999999999998542 246888888889999999999
Q ss_pred HHHHHHHHhhhh--cCCcEEEEEecceecCCC-------------ChHHHHHHhcCc--ccccccc------cCCccccc
Q 017914 195 SAEKGWLNLGRD--LGISAQVFRLGGIYGPGR-------------SSVDTIIKQLPL--SEGQKMR------RARQYTSR 251 (364)
Q Consensus 195 ~~E~~~~~~~~~--~~~~~~ilRp~~v~g~~~-------------~~~~~~~~~~~~--~~~~~~~------~~~~~~~~ 251 (364)
++|++++.++.+ .+++++++||+.+||+.. .++..+...... ......+ .+.+.++|
T Consensus 169 ~~E~~~~~~~~~~~~g~~~~ilR~~~vyG~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~ 248 (699)
T 1z45_A 169 AIENILNDLYNSDKKSWKFAILRYFNPIGAHPSGLIGEDPLGIPNNLLPYMAQVAVGRREKLYIFGDDYDSRDGTPIRDY 248 (699)
T ss_dssp HHHHHHHHHHHHSTTSCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHTTSSSCCCCC------CCSSCEECE
T ss_pred HHHHHHHHHHHhccCCCcEEEEEeccccCCCcccccccccccchhHHHHHHHHHHhcCCCceEEeCCcccCCCCCeeEee
Confidence 999999988766 689999999999999752 123333222110 0011122 57788999
Q ss_pred ccHHHHHHHHHHHccCC-------CCCceEEEeCCCCCCHHHHHHHHHHHhcCCCCCcccCCCCCCCCCCCccCCCCCCC
Q 017914 252 IHVDDICQVLSASIDKP-------SAWNVYNVVDDDPAPREEVFAYAWDLVEKKWPGLLKHRKPRENTESSNEKGSSRGE 324 (364)
Q Consensus 252 i~v~Dva~~~~~~l~~~-------~~g~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (364)
||++|+|++++.+++.. ..+++||+++++.+|+.|+++.+.+.+|.+.+..... . .......
T Consensus 249 i~v~Dva~a~~~a~~~~~~~~~~~~~~~~yni~~~~~~s~~el~~~i~~~~g~~~~~~~~~-------~----~~~~~~~ 317 (699)
T 1z45_A 249 IHVVDLAKGHIAALQYLEAYNENEGLCREWNLGSGKGSTVFEVYHAFCKASGIDLPYKVTG-------R----RAGDVLN 317 (699)
T ss_dssp EEHHHHHHHHHHHHHHHHHSCTTCCEEEEEEESCSCCEEHHHHHHHHHHHHTCCCCC--------------------CCC
T ss_pred EEHHHHHHHHHHHHhhhhccccccCCceEEEECCCCCCcHHHHHHHHHHHhCCCCCceecC-------C----CCCcccc
Confidence 99999999999988642 2257999999999999999999999999875422110 0 0112235
Q ss_pred eEEEchhHHHhcCcccCCCCHHHHHHHHHHHhcccC
Q 017914 325 KRVSNVRMKKELGVRLWHPSYKSGLQSIINQMDQPY 360 (364)
Q Consensus 325 ~~~d~~k~~~~lG~~p~~~~~~e~l~~~~~~~~~~~ 360 (364)
..+|++|++++|||+|++ +++|+|+++++|++++.
T Consensus 318 ~~~d~~ka~~~LG~~p~~-~l~egl~~~~~w~~~~~ 352 (699)
T 1z45_A 318 LTAKPDRAKRELKWQTEL-QVEDSCKDLWKWTTENP 352 (699)
T ss_dssp CCBCCHHHHHHTCCCCCC-CHHHHHHHHHHHHHHCT
T ss_pred ccCCHHHHHHhcCCCCCC-CHHHHHHHHHHHHHhCC
Confidence 678999999999999999 89999999999998764
|
| >1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-36 Score=275.58 Aligned_cols=286 Identities=13% Similarity=0.098 Sum_probs=207.3
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhh-------CCceEE-EccCChhhH--HhhccCceee
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQ-------SGFDVH-LFNANETAL--MILTTLKNYT 125 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~-------~~~~~~-~~D~~~~~~--~~~~~~d~v~ 125 (364)
..+|+||||| +||||++|+++|+++|++|++++|+..+...+.. .+++++ .+|++|.+. ..++++|+|+
T Consensus 9 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi 88 (342)
T 1y1p_A 9 PEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIKGAAGVA 88 (342)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTTTCSEEE
T ss_pred CCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCcccHHHHHHHhhccCCCceEEEEecCCcChHHHHHHHcCCCEEE
Confidence 4568999999 9999999999999999999999998765443321 467888 799999764 5667899999
Q ss_pred EEEEecCCCCCCC---ChhhhHHHHHHHHhh-cCCccEEEEEccceeecCCC----CccccCCC----------------
Q 017914 126 HLLVSIPPLEGTG---DPMLKHGELLRSTLM-NGHLQWLGYLSSTGVYGHSG----GAWVDEDY---------------- 181 (364)
Q Consensus 126 ~~~~~~~~~~~~~---~~~~~~~~~l~~a~~-~~~~~r~v~~Ss~~vy~~~~----~~~~~E~~---------------- 181 (364)
|+++......... +.......++++++. ..+++||||+||.++|+... +.+++|++
T Consensus 89 h~A~~~~~~~~~~~~~~~n~~g~~~ll~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~ 168 (342)
T 1y1p_A 89 HIASVVSFSNKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTSSTVSALIPKPNVEGIYLDEKSWNLESIDKAKTLPESD 168 (342)
T ss_dssp ECCCCCSCCSCHHHHHHHHHHHHHHHHHHHHTCTTCCEEEEECCGGGTCCCCTTCCCCEECTTCCCHHHHHHHHHSCTTS
T ss_pred EeCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCcEEEEeccHHHhcCCCCCCCCcccCccccCchhhhhhccccccc
Confidence 9998654321111 112344567788776 46789999999998886432 25688876
Q ss_pred CCCCCChhHHHHHHHHHHHHHhhhhc--CCcEEEEEecceecCCCC------hHHHHHHhcCcccc-cccccCCcccccc
Q 017914 182 PANPTTELGRLRLSAEKGWLNLGRDL--GISAQVFRLGGIYGPGRS------SVDTIIKQLPLSEG-QKMRRARQYTSRI 252 (364)
Q Consensus 182 ~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~ilRp~~v~g~~~~------~~~~~~~~~~~~~~-~~~~~~~~~~~~i 252 (364)
+..|.+.|+.+|.++|.+++.++++. +++++++||+.+||+... .+..++........ ...+.+ +.++|+
T Consensus 169 ~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v 247 (342)
T 1y1p_A 169 PQKSLWVYAASKTEAELAAWKFMDENKPHFTLNAVLPNYTIGTIFDPETQSGSTSGWMMSLFNGEVSPALALM-PPQYYV 247 (342)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHHHHCCSSEEEEEEESEEECCCSCTTTCCCHHHHHHHHHHTTCCCHHHHTC-CSEEEE
T ss_pred cccchHHHHHHHHHHHHHHHHHHHhcCCCceEEEEcCCceECCCCCCCCCCccHHHHHHHHHcCCCccccccC-CcCCEe
Confidence 23456789999999999999987664 788999999999998743 33333332111111 112222 568999
Q ss_pred cHHHHHHHHHHHccCCC-CCceEEEeCCCCCCHHHHHHHHHHHhcCCCCCcccCCCCCCCCCCCccCCCCCCCeEEEchh
Q 017914 253 HVDDICQVLSASIDKPS-AWNVYNVVDDDPAPREEVFAYAWDLVEKKWPGLLKHRKPRENTESSNEKGSSRGEKRVSNVR 331 (364)
Q Consensus 253 ~v~Dva~~~~~~l~~~~-~g~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k 331 (364)
|++|+|++++.+++++. .|+.| ++++..+|+.|+++.+.+.+|.+ . +... .+. .......+|++|
T Consensus 248 ~v~Dva~a~~~~~~~~~~~g~~~-~~~g~~~s~~e~~~~i~~~~~~~-~--~~~~-------~~~---~~~~~~~~d~~k 313 (342)
T 1y1p_A 248 SAVDIGLLHLGCLVLPQIERRRV-YGTAGTFDWNTVLATFRKLYPSK-T--FPAD-------FPD---QGQDLSKFDTAP 313 (342)
T ss_dssp EHHHHHHHHHHHHHCTTCCSCEE-EECCEEECHHHHHHHHHHHCTTS-C--CCCC-------CCC---CCCCCCEECCHH
T ss_pred EHHHHHHHHHHHHcCcccCCceE-EEeCCCCCHHHHHHHHHHHCCCc-c--CCCC-------CCc---cccccccCChHH
Confidence 99999999999998764 35444 45667899999999999999864 1 1110 000 111236789999
Q ss_pred HHHhcCc---ccCCCCHHHHHHHHHHHhcc
Q 017914 332 MKKELGV---RLWHPSYKSGLQSIINQMDQ 358 (364)
Q Consensus 332 ~~~~lG~---~p~~~~~~e~l~~~~~~~~~ 358 (364)
+++.||| .+.. +++|+|+++++|+++
T Consensus 314 ~~~~lg~~~~~~~~-~l~~~l~~~~~~~~~ 342 (342)
T 1y1p_A 314 SLEILKSLGRPGWR-SIEESIKDLVGSETA 342 (342)
T ss_dssp HHHHHHHTTCCSCC-CHHHHHHHHHCCSCC
T ss_pred HHHHHhhcccCCcC-CHHHHHHHHHHHhhC
Confidence 9999988 4555 799999999999864
|
| >2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-36 Score=276.32 Aligned_cols=284 Identities=14% Similarity=0.153 Sum_probs=200.1
Q ss_pred CCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhh---hh---h--hCCceEEEccCChhhH--HhhccCceeeE
Q 017914 58 SPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKK---EL---E--QSGFDVHLFNANETAL--MILTTLKNYTH 126 (364)
Q Consensus 58 ~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~---~l---~--~~~~~~~~~D~~~~~~--~~~~~~d~v~~ 126 (364)
.+++||||| +||||++|+++|+++|++|++++|+.+... .+ . ..+++++.+|++|.+. .+++++|+|+|
T Consensus 4 ~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih 83 (337)
T 2c29_D 4 QSETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPTNVKKVKHLLDLPKAETHLTLWKADLADEGSFDEAIKGCTGVFH 83 (337)
T ss_dssp --CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCTTCHHHHHHHHTSTTHHHHEEEEECCTTSTTTTHHHHTTCSEEEE
T ss_pred CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEECCcchhHHHHHHHhcccCCCeEEEEEcCCCCHHHHHHHHcCCCEEEE
Confidence 357999999 999999999999999999999999765321 11 1 1257889999999763 67789999999
Q ss_pred EEEecCCCCCCCCh-------hhhHHHHHHHHhhcCC-ccEEEEEccce-eecCC-CCccccCCCCCC---------CCC
Q 017914 127 LLVSIPPLEGTGDP-------MLKHGELLRSTLMNGH-LQWLGYLSSTG-VYGHS-GGAWVDEDYPAN---------PTT 187 (364)
Q Consensus 127 ~~~~~~~~~~~~~~-------~~~~~~~l~~a~~~~~-~~r~v~~Ss~~-vy~~~-~~~~~~E~~~~~---------~~~ 187 (364)
+++..... ..++ +.....|+++++...+ ++||||+||.+ +|+.. ...+++|+.+.. +.+
T Consensus 84 ~A~~~~~~--~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~riV~~SS~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~ 161 (337)
T 2c29_D 84 VATPMDFE--SKDPENEVIKPTIEGMLGIMKSCAAAKTVRRLVFTSSAGTVNIQEHQLPVYDESCWSDMEFCRAKKMTAW 161 (337)
T ss_dssp CCCCCCSS--CSSHHHHTHHHHHHHHHHHHHHHHHHSCCCEEEEECCGGGTSCSSSCCSEECTTCCCCHHHHHHHCCTTH
T ss_pred eccccCCC--CCChHHHHHHHHHHHHHHHHHHHHhCCCccEEEEeeeHhhcccCCCCCcccCcccCCchhhhcccCCccc
Confidence 99754211 1222 2344567888877666 89999999987 55532 234577775321 445
Q ss_pred hhHHHHHHHHHHHHHhhhhcCCcEEEEEecceecCCCCh-HH-HHHHhcC-c-ccccccccCCcccccccHHHHHHHHHH
Q 017914 188 ELGRLRLSAEKGWLNLGRDLGISAQVFRLGGIYGPGRSS-VD-TIIKQLP-L-SEGQKMRRARQYTSRIHVDDICQVLSA 263 (364)
Q Consensus 188 ~Y~~sK~~~E~~~~~~~~~~~~~~~ilRp~~v~g~~~~~-~~-~~~~~~~-~-~~~~~~~~~~~~~~~i~v~Dva~~~~~ 263 (364)
.|+.+|..+|.+++++++.++++++++||+++||+.... +. .+..... + ......+.+ ....|+|++|+|++++.
T Consensus 162 ~Y~~sK~~~E~~~~~~~~~~gi~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~i~v~Dva~a~~~ 240 (337)
T 2c29_D 162 MYFVSKTLAEQAAWKYAKENNIDFITIIPTLVVGPFIMSSMPPSLITALSPITGNEAHYSII-RQGQFVHLDDLCNAHIY 240 (337)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCCEEEEEECEEESCCSCSSCCHHHHHHTHHHHTCGGGHHHH-TEEEEEEHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHcCCcEEEEeCCceECCCCCCCCCchHHHHHHHHcCCCcccccc-CCCCEEEHHHHHHHHHH
Confidence 799999999999998887789999999999999997431 11 1111100 0 000011111 12348999999999999
Q ss_pred HccCCCCCceEEEeCCCCCCHHHHHHHHHHHhcC-CCCCcccCCCCCCCCCCCccCCCCCCCeEEEchhHHHhcCcccCC
Q 017914 264 SIDKPSAWNVYNVVDDDPAPREEVFAYAWDLVEK-KWPGLLKHRKPRENTESSNEKGSSRGEKRVSNVRMKKELGVRLWH 342 (364)
Q Consensus 264 ~l~~~~~g~~~~i~~~~~~s~~el~~~i~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~ 342 (364)
+++++..++.|++++ ..+|++|+++.+.+.++. +.|.. . .. .........+|++|+ ++|||+|++
T Consensus 241 ~~~~~~~~~~~~~~~-~~~s~~e~~~~i~~~~~~~~~~~~--~------~~----~~~~~~~~~~d~~k~-~~lG~~p~~ 306 (337)
T 2c29_D 241 LFENPKAEGRYICSS-HDCIILDLAKMLREKYPEYNIPTE--F------KG----VDENLKSVCFSSKKL-TDLGFEFKY 306 (337)
T ss_dssp HHHCTTCCEEEEECC-EEEEHHHHHHHHHHHCTTSCCCSC--C------TT----CCTTCCCCEECCHHH-HHHTCCCCC
T ss_pred HhcCcccCceEEEeC-CCCCHHHHHHHHHHHCCCccCCCC--C------Cc----ccCCCccccccHHHH-HHcCCCcCC
Confidence 998766556787655 568999999999998742 22211 1 00 011234567899999 789999999
Q ss_pred CCHHHHHHHHHHHhccc
Q 017914 343 PSYKSGLQSIINQMDQP 359 (364)
Q Consensus 343 ~~~~e~l~~~~~~~~~~ 359 (364)
+++|+|+++++|++++
T Consensus 307 -~l~e~l~~~~~~~~~~ 322 (337)
T 2c29_D 307 -SLEDMFTGAVDTCRAK 322 (337)
T ss_dssp -CHHHHHHHHHHHHHHT
T ss_pred -CHHHHHHHHHHHHHHc
Confidence 7999999999999863
|
| >2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-37 Score=282.56 Aligned_cols=292 Identities=13% Similarity=0.065 Sum_probs=213.6
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCC-------CEEEEEEeCchhhhhhhhCCceEEEccCChhhH--Hhh-ccCceee
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQG-------WVVSGTCTNVMKKKELEQSGFDVHLFNANETAL--MIL-TTLKNYT 125 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g-------~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~--~~~-~~~d~v~ 125 (364)
..+|+||||| +||||++|+++|+++| ++|++++|+..........++.++.+|++|.+. ..+ .++|+|+
T Consensus 12 ~~~~~vlVtGa~G~iG~~l~~~L~~~g~~~~r~~~~V~~~~r~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~d~vi 91 (342)
T 2hrz_A 12 FQGMHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEAPAGFSGAVDARAADLSAPGEAEKLVEARPDVIF 91 (342)
T ss_dssp CSCEEEEEETTTSHHHHHHHHHHHHHCEETTEEEEEEEEEESSCCCCCTTCCSEEEEEECCTTSTTHHHHHHHTCCSEEE
T ss_pred ccCCEEEEECCCcHHHHHHHHHHHhcCCcccCCCceEEEEEccCCccccccCCceeEEEcCCCCHHHHHHHHhcCCCEEE
Confidence 4568999999 9999999999999999 899999997654322222467889999999764 455 4899999
Q ss_pred EEEEecCCCCCCCC------hhhhHHHHHHHHhhcCC-----ccEEEEEccceeecCCCCccccCCCCCCCCChhHHHHH
Q 017914 126 HLLVSIPPLEGTGD------PMLKHGELLRSTLMNGH-----LQWLGYLSSTGVYGHSGGAWVDEDYPANPTTELGRLRL 194 (364)
Q Consensus 126 ~~~~~~~~~~~~~~------~~~~~~~~l~~a~~~~~-----~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~~sK~ 194 (364)
|+++..... ...+ .......++++++...+ +++|||+||.++|+.....+++|+++..|.+.|+.+|.
T Consensus 92 h~A~~~~~~-~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~E~~~~~~~~~Y~~sK~ 170 (342)
T 2hrz_A 92 HLAAIVSGE-AELDFDKGYRINLDGTRYLFDAIRIANGKDGYKPRVVFTSSIAVFGAPLPYPIPDEFHTTPLTSYGTQKA 170 (342)
T ss_dssp ECCCCCHHH-HHHCHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGCCSSCCSSBCTTCCCCCSSHHHHHHH
T ss_pred ECCccCccc-ccccHHHHHHHHHHHHHHHHHHHHhcccccCCCcEEEEeCchHhhCCCCCCCcCCCCCCCCcchHHHHHH
Confidence 999753210 0011 12234567777777654 78999999999998765668999999999999999999
Q ss_pred HHHHHHHHhhhhcCCcEEEEEecceec-CCC------ChHHHHHHhcCcccc-cccccCCcccccccHHHHHHHHHHHcc
Q 017914 195 SAEKGWLNLGRDLGISAQVFRLGGIYG-PGR------SSVDTIIKQLPLSEG-QKMRRARQYTSRIHVDDICQVLSASID 266 (364)
Q Consensus 195 ~~E~~~~~~~~~~~~~~~ilRp~~v~g-~~~------~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~v~Dva~~~~~~l~ 266 (364)
++|.++++++++.+++.+++|++.+|| ++. .++..++........ .....++...+++|++|+|++++.+++
T Consensus 171 ~~e~~~~~~~~~~~~~~~~ir~~~v~g~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~Dva~~~~~~~~ 250 (342)
T 2hrz_A 171 ICELLLSDYSRRGFFDGIGIRLPTICIRPGKPNAAASGFFSNILREPLVGQEAVLPVPESIRHWHASPRSAVGFLIHGAM 250 (342)
T ss_dssp HHHHHHHHHHHTTSCEEEEEEECEETTCCSSCCCSGGGHHHHHHHHHHTTCCEEECSCTTCEEEEECHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCceeEEeeeEEecCCCCcchhHHHHHHHHHHHhcCCCeeccCCCccceeeEehHHHHHHHHHHHh
Confidence 999999999887789999999999998 543 123333322111111 111233556778999999999999998
Q ss_pred CCC----CCceEEEeCCCCCCHHHHHHHHHHHhcCCCCCcccCCCCCCCCCCCccCC-CCCCCeEEEchhHHHhcCcccC
Q 017914 267 KPS----AWNVYNVVDDDPAPREEVFAYAWDLVEKKWPGLLKHRKPRENTESSNEKG-SSRGEKRVSNVRMKKELGVRLW 341 (364)
Q Consensus 267 ~~~----~g~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~d~~k~~~~lG~~p~ 341 (364)
.+. .+++||++ ++.+|++|+++.+.+.+|.+.+..+.. ...+.... .......+|++|+++ |||+|+
T Consensus 251 ~~~~~~~~~~~~ni~-g~~~s~~e~~~~i~~~~g~~~~~~~~~------~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~ 322 (342)
T 2hrz_A 251 IDVEKVGPRRNLSMP-GLSATVGEQIEALRKVAGEKAVALIRR------EPNEMIMRMCEGWAPGFEAKRARE-LGFTAE 322 (342)
T ss_dssp SCHHHHCSCCEEECC-CEEEEHHHHHHHHHHHHCHHHHTTEEE------CCCHHHHHHHTTSCCCBCCHHHHH-TTCCCC
T ss_pred ccccccCCccEEEcC-CCCCCHHHHHHHHHHHcCcccccceee------ccCcchhhhhcccccccChHHHHH-cCCCCC
Confidence 763 46799995 567999999999999998763111111 00000000 011123689999997 999999
Q ss_pred CCCHHHHHHHHHHHhcc
Q 017914 342 HPSYKSGLQSIINQMDQ 358 (364)
Q Consensus 342 ~~~~~e~l~~~~~~~~~ 358 (364)
+ +++|+|+++++|++.
T Consensus 323 ~-~l~e~l~~~~~~~~~ 338 (342)
T 2hrz_A 323 S-SFEEIIQVHIEDELG 338 (342)
T ss_dssp S-SHHHHHHHHHHHHST
T ss_pred C-CHHHHHHHHHHHhcC
Confidence 8 899999999999984
|
| >2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A | Back alignment and structure |
|---|
Probab=100.00 E-value=7.8e-37 Score=277.80 Aligned_cols=286 Identities=15% Similarity=0.138 Sum_probs=200.3
Q ss_pred CCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhh------hhh-hCCceEEEccCChhhH--HhhccCceeeEE
Q 017914 58 SPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKK------ELE-QSGFDVHLFNANETAL--MILTTLKNYTHL 127 (364)
Q Consensus 58 ~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~------~l~-~~~~~~~~~D~~~~~~--~~~~~~d~v~~~ 127 (364)
++|+||||| +||||++|+++|+++||+|++++|+.++.. .+. ..+++++.+|++|++. .+++++|+|+|+
T Consensus 8 ~~~~vlVTGatGfIG~~l~~~Ll~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~Vih~ 87 (338)
T 2rh8_A 8 GKKTACVVGGTGFVASLLVKLLLQKGYAVNTTVRDPDNQKKVSHLLELQELGDLKIFRADLTDELSFEAPIAGCDFVFHV 87 (338)
T ss_dssp -CCEEEEECTTSHHHHHHHHHHHHTTCEEEEEESCTTCTTTTHHHHHHGGGSCEEEEECCTTTSSSSHHHHTTCSEEEEE
T ss_pred CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCcchhhhHHHHHhcCCCCcEEEEecCCCChHHHHHHHcCCCEEEEe
Confidence 368999999 999999999999999999999999765321 121 2467899999999763 677899999999
Q ss_pred EEecCCCC-C----CCChhhhHHHHHHHHhhcCC-ccEEEEEccce-eecCC---CCccccCCCCC--------CC-CCh
Q 017914 128 LVSIPPLE-G----TGDPMLKHGELLRSTLMNGH-LQWLGYLSSTG-VYGHS---GGAWVDEDYPA--------NP-TTE 188 (364)
Q Consensus 128 ~~~~~~~~-~----~~~~~~~~~~~l~~a~~~~~-~~r~v~~Ss~~-vy~~~---~~~~~~E~~~~--------~~-~~~ 188 (364)
|+...... . ..+.....+.|+++++...+ ++||||+||.+ +|+.. ...+++|+.+. .| ...
T Consensus 88 A~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~v~r~V~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~ 167 (338)
T 2rh8_A 88 ATPVHFASEDPENDMIKPAIQGVVNVMKACTRAKSVKRVILTSSAAAVTINQLDGTGLVVDEKNWTDIEFLTSAKPPTWG 167 (338)
T ss_dssp SSCCCC---------CHHHHHHHHHHHHHHHHCTTCCEEEEECCHHHHHHHHHTCSCCCCCTTTTTCC-------CCCCC
T ss_pred CCccCCCCCCcHHHHHHHHHHHHHHHHHHHHHcCCcCEEEEEecHHHeecCCcCCCCcccChhhccchhhccccCCccch
Confidence 97543211 0 11223455678888888775 89999999986 44321 11367777532 11 126
Q ss_pred hHHHHHHHHHHHHHhhhhcCCcEEEEEecceecCCCCh-----HHHH---HHhcCcccc--cccccCCcccccccHHHHH
Q 017914 189 LGRLRLSAEKGWLNLGRDLGISAQVFRLGGIYGPGRSS-----VDTI---IKQLPLSEG--QKMRRARQYTSRIHVDDIC 258 (364)
Q Consensus 189 Y~~sK~~~E~~~~~~~~~~~~~~~ilRp~~v~g~~~~~-----~~~~---~~~~~~~~~--~~~~~~~~~~~~i~v~Dva 258 (364)
|+.+|..+|.+++++++.+|++++++||+.+||+.... +..+ ..+.....+ .....+...++|+|++|+|
T Consensus 168 Y~~sK~~~E~~~~~~~~~~gi~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~v~Dva 247 (338)
T 2rh8_A 168 YPASKTLAEKAAWKFAEENNIDLITVIPTLMAGSSLTSDVPSSIGLAMSLITGNEFLINGMKGMQMLSGSVSIAHVEDVC 247 (338)
T ss_dssp CTTSCCHHHHHHHHHHHHHTCCEEEEEECEEESCCSSSSCCHHHHHHHHHHHTCHHHHHHHHHHHHHHSSEEEEEHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHcCCcEEEEeCCceECCCCCCCCCchHHHHHHHHcCCccccccccccccccCcccEEEHHHHH
Confidence 99999999999999887779999999999999997531 1111 111100000 0000011234899999999
Q ss_pred HHHHHHccCCCCCceEEEeCCCCCCHHHHHHHHHHHhcC-CCCCcccCCCCCCCCCCCccCCCCCCCeEEEchhHHHhcC
Q 017914 259 QVLSASIDKPSAWNVYNVVDDDPAPREEVFAYAWDLVEK-KWPGLLKHRKPRENTESSNEKGSSRGEKRVSNVRMKKELG 337 (364)
Q Consensus 259 ~~~~~~l~~~~~g~~~~i~~~~~~s~~el~~~i~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG 337 (364)
++++.+++++..++.|++++ ..+|+.|+++.+.+.++. +.|.. . ...+ . .....+|++|+ ++||
T Consensus 248 ~a~~~~~~~~~~~~~~~~~~-~~~s~~e~~~~l~~~~~~~~~~~~--~------~~~~---~--~~~~~~d~~k~-~~lG 312 (338)
T 2rh8_A 248 RAHIFVAEKESASGRYICCA-ANTSVPELAKFLSKRYPQYKVPTD--F------GDFP---P--KSKLIISSEKL-VKEG 312 (338)
T ss_dssp HHHHHHHHCTTCCEEEEECS-EEECHHHHHHHHHHHCTTSCCCCC--C------TTSC---S--SCSCCCCCHHH-HHHT
T ss_pred HHHHHHHcCCCcCCcEEEec-CCCCHHHHHHHHHHhCCCCCCCCC--C------CCCC---c--CcceeechHHH-HHhC
Confidence 99999998766666898866 469999999999988752 22211 1 0000 0 11267899999 6799
Q ss_pred cccCCCCHHHHHHHHHHHhccc
Q 017914 338 VRLWHPSYKSGLQSIINQMDQP 359 (364)
Q Consensus 338 ~~p~~~~~~e~l~~~~~~~~~~ 359 (364)
|+|++ +++|+|+++++|++++
T Consensus 313 ~~p~~-~l~~gl~~~~~~~~~~ 333 (338)
T 2rh8_A 313 FSFKY-GIEEIYDESVEYFKAK 333 (338)
T ss_dssp CCCSC-CHHHHHHHHHHHHHHT
T ss_pred CCCCC-CHHHHHHHHHHHHHHc
Confidence 99999 8999999999999864
|
| >2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.7e-36 Score=275.41 Aligned_cols=291 Identities=16% Similarity=0.120 Sum_probs=210.6
Q ss_pred CCeEEEEc-CChhhHHHHHHHHhCC-----CEEEEEEeCchhhhhhhhCCceEEEccCChhhH--Hhhcc---CceeeEE
Q 017914 59 PNRMLILG-MGFVGRIFAEKIKNQG-----WVVSGTCTNVMKKKELEQSGFDVHLFNANETAL--MILTT---LKNYTHL 127 (364)
Q Consensus 59 ~~~vlVtG-tG~iG~~l~~~L~~~g-----~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~--~~~~~---~d~v~~~ 127 (364)
+|+||||| |||||++|+++|+++| ++|++++|+..... +...+++++.+|++|.+. .++++ +|.|+|+
T Consensus 1 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~~~~V~~~~r~~~~~~-~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~vih~ 79 (364)
T 2v6g_A 1 SSVALIVGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPAW-HEDNPINYVQCDISDPDDSQAKLSPLTDVTHVFYV 79 (364)
T ss_dssp CEEEEEETTTSHHHHHHHHHTTSTTCTTCSEEEEEEESSCCCSC-CCSSCCEEEECCTTSHHHHHHHHTTCTTCCEEEEC
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCCCCCCceEEEEEeCCCCccc-cccCceEEEEeecCCHHHHHHHHhcCCCCCEEEEC
Confidence 37899999 9999999999999999 99999999866543 223578999999999764 56666 9999999
Q ss_pred EEecCCCC-CCCChhhhHHHHHHHHhhcC--CccEEE-------EEccceeecCC--CCccccCCCCCCC-CChhHHHHH
Q 017914 128 LVSIPPLE-GTGDPMLKHGELLRSTLMNG--HLQWLG-------YLSSTGVYGHS--GGAWVDEDYPANP-TTELGRLRL 194 (364)
Q Consensus 128 ~~~~~~~~-~~~~~~~~~~~~l~~a~~~~--~~~r~v-------~~Ss~~vy~~~--~~~~~~E~~~~~~-~~~Y~~sK~ 194 (364)
++...... ...+.+.....+++++++.. ++++|| |+||.++||.. ...+++|+++..| .+.| .
T Consensus 80 a~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~~g~~i~~Ss~~vyg~~~~~~~~~~E~~~~~~~~~~y----~ 155 (364)
T 2v6g_A 80 TWANRSTEQENCEANSKMFRNVLDAVIPNCPNLKHISLQTGRKHYMGPFESYGKIESHDPPYTEDLPRLKYMNFY----Y 155 (364)
T ss_dssp CCCCCSSHHHHHHHHHHHHHHHHHHHTTTCTTCCEEEEECCTHHHHCCGGGTTTSCCCCSSBCTTSCCCSSCCHH----H
T ss_pred CCCCcchHHHHHHHhHHHHHHHHHHHHHhccccceEEeccCceEEEechhhccccccCCCCCCccccCCccchhh----H
Confidence 97542100 01112334567888888876 799998 79999999875 3457889887765 6677 4
Q ss_pred HHHHHHHHhhhhcC-CcEEEEEecceecCCCCh-----HH----HHH---HhcCcccccccccC---CcccccccHHHHH
Q 017914 195 SAEKGWLNLGRDLG-ISAQVFRLGGIYGPGRSS-----VD----TII---KQLPLSEGQKMRRA---RQYTSRIHVDDIC 258 (364)
Q Consensus 195 ~~E~~~~~~~~~~~-~~~~ilRp~~v~g~~~~~-----~~----~~~---~~~~~~~~~~~~~~---~~~~~~i~v~Dva 258 (364)
.+|++++++++..+ ++++++||+.+||++... +. ..+ .+..+ ...+++ ...++++|++|+|
T Consensus 156 ~~E~~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~g~~~---~~~g~~~~~~~~~~~~~v~Dva 232 (364)
T 2v6g_A 156 DLEDIMLEEVEKKEGLTWSVHRPGNIFGFSPYSMMNLVGTLCVYAAICKHEGKVL---RFTGCKAAWDGYSDCSDADLIA 232 (364)
T ss_dssp HHHHHHHHHHTTSTTCEEEEEEESSEECCCTTCSSCHHHHHHHHHHHHHHHTCCB---CCCSCHHHHHSCBCCEEHHHHH
T ss_pred HHHHHHHHHhhcCCCceEEEECCCceeCCCCCcccchHHHHHHHHHHHHhcCCce---ecCCCcccccccCCCCcHHHHH
Confidence 58999988877676 999999999999987532 11 111 11111 123444 3457788899999
Q ss_pred HHHHHHccCCC-CCceEEEeCCCCCCHHHHHHHHHHHhcCCCCCc-ccCCCC--C--------------CCCCCCccCCC
Q 017914 259 QVLSASIDKPS-AWNVYNVVDDDPAPREEVFAYAWDLVEKKWPGL-LKHRKP--R--------------ENTESSNEKGS 320 (364)
Q Consensus 259 ~~~~~~l~~~~-~g~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~-~~~~~~--~--------------~~~~~~~~~~~ 320 (364)
++++.+++++. .|++||+++++.+|+.|+++.+.+.+|.+.+.. ...+.. . .....+.....
T Consensus 233 ~a~~~~~~~~~~~g~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (364)
T 2v6g_A 233 EHHIWAAVDPYAKNEAFNVSNGDVFKWKHFWKVLAEQFGVECGEYEEGVDLKLQDLMKGKEPVWEEIVRENGLTPTKLKD 312 (364)
T ss_dssp HHHHHHHHCGGGTTEEEEECCSCCBCHHHHHHHHHHHHTCCBCCCCTTCCCCHHHHTTTCHHHHHHHHHHTTCCCCCHHH
T ss_pred HHHHHHHhCCCCCCceEEecCCCcCCHHHHHHHHHHHhCCCCCCCCCCCCccHHHHHhhhHHHHHHHHHHhCCCcccccc
Confidence 99999998874 578999999999999999999999999863321 011100 0 00000000000
Q ss_pred C----------CCC-eEEEchhHHHhcCcccCCCCHHHHHHHHHHHhccc
Q 017914 321 S----------RGE-KRVSNVRMKKELGVRLWHPSYKSGLQSIINQMDQP 359 (364)
Q Consensus 321 ~----------~~~-~~~d~~k~~~~lG~~p~~~~~~e~l~~~~~~~~~~ 359 (364)
. ..+ ..+|++|+++ |||+|.+ +++|+|+++++|++++
T Consensus 313 ~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~-~~~e~l~~~~~~~~~~ 360 (364)
T 2v6g_A 313 VGIWWFGDVILGNECFLDSMNKSKE-HGFLGFR-NSKNAFISWIDKAKAY 360 (364)
T ss_dssp HCCHHHHHHHHTSCCCCBCCHHHHH-TTCCCCC-CHHHHHHHHHHHHHHT
T ss_pred ccccchhhhccccchhhcchHHHHh-cCCCCCC-CHHHHHHHHHHHHHHc
Confidence 0 144 5789999987 9999988 7999999999999864
|
| >2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-35 Score=267.25 Aligned_cols=285 Identities=15% Similarity=0.136 Sum_probs=195.6
Q ss_pred CCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEe-Cchh---hhhhh-----hCCceEEEccCChhhH--HhhccCceeeE
Q 017914 59 PNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCT-NVMK---KKELE-----QSGFDVHLFNANETAL--MILTTLKNYTH 126 (364)
Q Consensus 59 ~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r-~~~~---~~~l~-----~~~~~~~~~D~~~~~~--~~~~~~d~v~~ 126 (364)
+|+||||| +||||++|+++|+++|++|++++| +++. ...+. ..++.++.+|++|.+. .+++++|+|+|
T Consensus 1 ~k~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih 80 (322)
T 2p4h_X 1 KGRVCVTGGTGFLGSWIIKSLLENGYSVNTTIRADPERKRDVSFLTNLPGASEKLHFFNADLSNPDSFAAAIEGCVGIFH 80 (322)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCCC----CCCHHHHTSTTHHHHEEECCCCTTCGGGGHHHHTTCSEEEE
T ss_pred CCEEEEECChhHHHHHHHHHHHHCCCEEEEEEeCCccchhHHHHHHhhhccCCceEEEecCCCCHHHHHHHHcCCCEEEE
Confidence 47899999 999999999999999999999998 5432 11111 1246788899999764 67789999999
Q ss_pred EEEecCCCCC--C---CChhhhHHHHHHHHhhcC-CccEEEEEcccee-ecCC-CCccccCCCCC--------CCCC-hh
Q 017914 127 LLVSIPPLEG--T---GDPMLKHGELLRSTLMNG-HLQWLGYLSSTGV-YGHS-GGAWVDEDYPA--------NPTT-EL 189 (364)
Q Consensus 127 ~~~~~~~~~~--~---~~~~~~~~~~l~~a~~~~-~~~r~v~~Ss~~v-y~~~-~~~~~~E~~~~--------~~~~-~Y 189 (364)
+++....... . .+.+.....++++++... +++||||+||.++ |+.. ...+++|+.+. .|.. .|
T Consensus 81 ~A~~~~~~~~~~~~~~~~~nv~gt~~l~~aa~~~~~~~~iV~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~~p~~~~Y 160 (322)
T 2p4h_X 81 TASPIDFAVSEPEEIVTKRTVDGALGILKACVNSKTVKRFIYTSSGSAVSFNGKDKDVLDESDWSDVDLLRSVKPFGWNY 160 (322)
T ss_dssp CCCCC--------CHHHHHHHHHHHHHHHHHTTCSSCCEEEEEEEGGGTSCSSSCCSEECTTCCCCHHHHHHHCCTTHHH
T ss_pred cCCcccCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccHHHcccCCCCCeecCCccccchhhhcccCcccccH
Confidence 9964311100 0 011234456788888776 7899999999874 4332 23457776532 2333 69
Q ss_pred HHHHHHHHHHHHHhhhhcCCcEEEEEecceecCCCCh-HHHHHH-hcC--cccccccccCCcccccccHHHHHHHHHHHc
Q 017914 190 GRLRLSAEKGWLNLGRDLGISAQVFRLGGIYGPGRSS-VDTIIK-QLP--LSEGQKMRRARQYTSRIHVDDICQVLSASI 265 (364)
Q Consensus 190 ~~sK~~~E~~~~~~~~~~~~~~~ilRp~~v~g~~~~~-~~~~~~-~~~--~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l 265 (364)
+.+|..+|.+++++++.++++++++||+++||+.... +..... ... ......++. ..++|+|++|+|++++.++
T Consensus 161 ~~sK~~~e~~~~~~~~~~gi~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~g~~~~~~~--~~~~~i~v~Dva~a~~~~~ 238 (322)
T 2p4h_X 161 AVSKTLAEKAVLEFGEQNGIDVVTLILPFIVGRFVCPKLPDSIEKALVLVLGKKEQIGV--TRFHMVHVDDVARAHIYLL 238 (322)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCEEEEEECEEESCCCSSSCCHHHHHHTHHHHSCGGGCCE--EEEEEEEHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCCcEEEEcCCceECCCCCCCCCchHHHHHHHHhCCCccCcC--CCcCEEEHHHHHHHHHHHh
Confidence 9999999999999887789999999999999997431 111110 000 000011121 2348999999999999999
Q ss_pred cCCCCCceEEEeCCCCCCHHHHHHHHHHHhcC-CCCCcccCCCCCCCCCCCccCCCCCCCeEEEchhHHHhcCcccCCCC
Q 017914 266 DKPSAWNVYNVVDDDPAPREEVFAYAWDLVEK-KWPGLLKHRKPRENTESSNEKGSSRGEKRVSNVRMKKELGVRLWHPS 344 (364)
Q Consensus 266 ~~~~~g~~~~i~~~~~~s~~el~~~i~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~ 344 (364)
+++...+.|| ++++.+|+.|+++.+.+.++. ++|..... ... . ......+|++|+ ++|||+|++ +
T Consensus 239 ~~~~~~g~~~-~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~------~~~---~--~~~~~~~d~~k~-~~lG~~p~~-~ 304 (322)
T 2p4h_X 239 ENSVPGGRYN-CSPFIVPIEEMSQLLSAKYPEYQILTVDEL------KEI---K--GARLPDLNTKKL-VDAGFDFKY-T 304 (322)
T ss_dssp HSCCCCEEEE-CCCEEEEHHHHHHHHHHHCTTSCCCCTTTT------TTC---C--CEECCEECCHHH-HHTTCCCCC-C
T ss_pred hCcCCCCCEE-EcCCCCCHHHHHHHHHHhCCCCCCCCCccc------cCC---C--CCcceecccHHH-HHhCCccCC-C
Confidence 8765433698 567789999999999987642 22211000 000 0 113577899999 679999999 7
Q ss_pred HHHHHHHHHHHhccc
Q 017914 345 YKSGLQSIINQMDQP 359 (364)
Q Consensus 345 ~~e~l~~~~~~~~~~ 359 (364)
++|+|+++++|++++
T Consensus 305 ~~~~l~~~~~~~~~~ 319 (322)
T 2p4h_X 305 IEDMFDDAIQCCKEK 319 (322)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhc
Confidence 999999999999753
|
| >3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-33 Score=239.08 Aligned_cols=220 Identities=14% Similarity=0.102 Sum_probs=171.1
Q ss_pred CCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCChhhH--HhhccCceeeEEEEecCCCC
Q 017914 59 PNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETAL--MILTTLKNYTHLLVSIPPLE 135 (364)
Q Consensus 59 ~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~--~~~~~~d~v~~~~~~~~~~~ 135 (364)
||+||||| +|+||++|+++|+++|++|++++|++.+...+. .+++++.+|++|.+. ..++++|+|+|+++......
T Consensus 4 m~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~a~~~~~~~ 82 (227)
T 3dhn_A 4 VKKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKIKIEN-EHLKVKKADVSSLDEVCEVCKGADAVISAFNPGWNNP 82 (227)
T ss_dssp CCEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGGGCCCCC-TTEEEECCCTTCHHHHHHHHTTCSEEEECCCC-----
T ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcccchhcc-CceEEEEecCCCHHHHHHHhcCCCEEEEeCcCCCCCh
Confidence 58999999 999999999999999999999999987765543 678999999999774 77789999999986543222
Q ss_pred CCCChhhhHHHHHHHHhhcCCccEEEEEccceeecCCCCccccCCCCCCCCChhHHHHHHHHHHHHHhhhhcCCcEEEEE
Q 017914 136 GTGDPMLKHGELLRSTLMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANPTTELGRLRLSAEKGWLNLGRDLGISAQVFR 215 (364)
Q Consensus 136 ~~~~~~~~~~~~l~~a~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR 215 (364)
...+.......++++++++.+++||||+||.++|....+. ..|+.+..|.+.|+.+|...|.+++.+.++.+++++++|
T Consensus 83 ~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~~~~-~~~~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilr 161 (227)
T 3dhn_A 83 DIYDETIKVYLTIIDGVKKAGVNRFLMVGGAGSLFIAPGL-RLMDSGEVPENILPGVKALGEFYLNFLMKEKEIDWVFFS 161 (227)
T ss_dssp -CCSHHHHHHHHHHHHHHHTTCSEEEEECCSTTSEEETTE-EGGGTTCSCGGGHHHHHHHHHHHHHTGGGCCSSEEEEEE
T ss_pred hHHHHHHHHHHHHHHHHHHhCCCEEEEeCChhhccCCCCC-ccccCCcchHHHHHHHHHHHHHHHHHHhhccCccEEEEe
Confidence 2334456677899999999999999999998876554443 455677778899999999999999998878899999999
Q ss_pred ecceecCCCChHHHHHHhcCcccccccccCCcccccccHHHHHHHHHHHccCCC-CCceEEEeCCCCCCHHH
Q 017914 216 LGGIYGPGRSSVDTIIKQLPLSEGQKMRRARQYTSRIHVDDICQVLSASIDKPS-AWNVYNVVDDDPAPREE 286 (364)
Q Consensus 216 p~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~-~g~~~~i~~~~~~s~~e 286 (364)
|+.+||++...-. ........+..+.. ++|+|++|+|++++.+++++. .|++|+++++++.+|.+
T Consensus 162 p~~v~g~~~~~~~-----~~~~~~~~~~~~~~-~~~i~~~Dva~ai~~~l~~~~~~g~~~~~~~~~~~~~~~ 227 (227)
T 3dhn_A 162 PAADMRPGVRTGR-----YRLGKDDMIVDIVG-NSHISVEDYAAAMIDELEHPKHHQERFTIGYLEHHHHHH 227 (227)
T ss_dssp CCSEEESCCCCCC-----CEEESSBCCCCTTS-CCEEEHHHHHHHHHHHHHSCCCCSEEEEEECCSCCC---
T ss_pred CCcccCCCccccc-----eeecCCCcccCCCC-CcEEeHHHHHHHHHHHHhCccccCcEEEEEeehhcccCC
Confidence 9999998753210 00111111112222 889999999999999999986 58999999999998864
|
| >2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-33 Score=249.14 Aligned_cols=265 Identities=11% Similarity=0.120 Sum_probs=198.2
Q ss_pred CeEEEEc-CChhhHHHHHHHHhC--CCEEEEEEeCchhhhhhhhCCceEEEccCChhhH--HhhccCceeeEEEEecCCC
Q 017914 60 NRMLILG-MGFVGRIFAEKIKNQ--GWVVSGTCTNVMKKKELEQSGFDVHLFNANETAL--MILTTLKNYTHLLVSIPPL 134 (364)
Q Consensus 60 ~~vlVtG-tG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~--~~~~~~d~v~~~~~~~~~~ 134 (364)
|+||||| |||||++++++|+++ |++|++++|++.+...+...+++++.+|++|++. .+++++|.|+|+++.. .
T Consensus 1 ~~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~d~~~l~~~~~~~d~vi~~a~~~-~- 78 (287)
T 2jl1_A 1 FSIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKASTLADQGVEVRHGDYNQPESLQKAFAGVSKLLFISGPH-Y- 78 (287)
T ss_dssp CCEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTTHHHHHTTCEEEECCTTCHHHHHHHTTTCSEEEECCCCC-S-
T ss_pred CeEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHHhHHhhcCCeEEEeccCCHHHHHHHHhcCCEEEEcCCCC-c-
Confidence 5799999 999999999999999 9999999998877666655789999999999774 6778999999998741 1
Q ss_pred CCCCChhhhHHHHHHHHhhcCCccEEEEEccceeecCCCCccccCCCCCCCCChhHHHHHHHHHHHHHhhhhcCCcEEEE
Q 017914 135 EGTGDPMLKHGELLRSTLMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANPTTELGRLRLSAEKGWLNLGRDLGISAQVF 214 (364)
Q Consensus 135 ~~~~~~~~~~~~~l~~a~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~il 214 (364)
..+.......++++++++.++++|||+||.++|.. ..+|+.+|..+|+++++ .+++++++
T Consensus 79 --~~~~n~~~~~~l~~a~~~~~~~~~v~~Ss~~~~~~--------------~~~y~~~K~~~E~~~~~----~~~~~~il 138 (287)
T 2jl1_A 79 --DNTLLIVQHANVVKAARDAGVKHIAYTGYAFAEES--------------IIPLAHVHLATEYAIRT----TNIPYTFL 138 (287)
T ss_dssp --CHHHHHHHHHHHHHHHHHTTCSEEEEEEETTGGGC--------------CSTHHHHHHHHHHHHHH----TTCCEEEE
T ss_pred --CchHHHHHHHHHHHHHHHcCCCEEEEECCCCCCCC--------------CCchHHHHHHHHHHHHH----cCCCeEEE
Confidence 01124556789999999899999999999877521 13799999999999863 68999999
Q ss_pred EecceecCC-CChHHHHHHhcCcccccccccCCcccccccHHHHHHHHHHHccCCC-CCceEEEeCCCCCCHHHHHHHHH
Q 017914 215 RLGGIYGPG-RSSVDTIIKQLPLSEGQKMRRARQYTSRIHVDDICQVLSASIDKPS-AWNVYNVVDDDPAPREEVFAYAW 292 (364)
Q Consensus 215 Rp~~v~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~-~g~~~~i~~~~~~s~~el~~~i~ 292 (364)
||+.++|+. ..++......... ....+++.++|+|++|+|++++.+++++. .|++||+++++.+|+.|+++.+.
T Consensus 139 rp~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~g~~~~i~~~~~~s~~e~~~~i~ 214 (287)
T 2jl1_A 139 RNALYTDFFVNEGLRASTESGAI----VTNAGSGIVNSVTRNELALAAATVLTEEGHENKTYNLVSNQPWTFDELAQILS 214 (287)
T ss_dssp EECCBHHHHSSGGGHHHHHHTEE----EESCTTCCBCCBCHHHHHHHHHHHHTSSSCTTEEEEECCSSCBCHHHHHHHHH
T ss_pred ECCEeccccchhhHHHHhhCCce----eccCCCCccCccCHHHHHHHHHHHhcCCCCCCcEEEecCCCcCCHHHHHHHHH
Confidence 999988865 3444444332211 12345677899999999999999998863 57899999999999999999999
Q ss_pred HHhcCCCCCcccCCCCCCC-----CCCCcc-CC--------CCCCCeEEEchhHHHhcCcccCCCCHHHHHHHHHH
Q 017914 293 DLVEKKWPGLLKHRKPREN-----TESSNE-KG--------SSRGEKRVSNVRMKKELGVRLWHPSYKSGLQSIIN 354 (364)
Q Consensus 293 ~~~g~~~~~~~~~~~~~~~-----~~~~~~-~~--------~~~~~~~~d~~k~~~~lG~~p~~~~~~e~l~~~~~ 354 (364)
+.+|.+.+. ...+..... ...+.. .. .......+|++|+++.|| |.+ +++|+|+++++
T Consensus 215 ~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG--~~~-~l~e~l~~~~~ 286 (287)
T 2jl1_A 215 EVSGKKVVH-QPVSFEEEKNFLVNAGVPEPFTEITAAIYDAISKGEASKTSDDLQKLIG--SLT-PLKETVKQALK 286 (287)
T ss_dssp HHHSSCCEE-EECCHHHHHHHHHHTTCCHHHHHHHHHHHHHHHTTTTCCCCSHHHHHHS--SCC-CHHHHHHHHHT
T ss_pred HHHCCcceE-EeCCHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCCCcCCchHHHHHhC--CCC-CHHHHHHHHhc
Confidence 999987431 111100000 000000 00 011345678999999999 666 89999999875
|
| >2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-33 Score=247.45 Aligned_cols=260 Identities=12% Similarity=0.036 Sum_probs=189.9
Q ss_pred CeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCChhhH--Hhhcc--CceeeEEEEecCCC
Q 017914 60 NRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETAL--MILTT--LKNYTHLLVSIPPL 134 (364)
Q Consensus 60 ~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~--~~~~~--~d~v~~~~~~~~~~ 134 (364)
|+||||| +|+||++++++|++ |++|++++|++... .+ +.+|++|++. ..+++ +|+|+|+++.....
T Consensus 1 m~ilVtGatG~iG~~l~~~L~~-g~~V~~~~r~~~~~-----~~---~~~Dl~~~~~~~~~~~~~~~d~vi~~a~~~~~~ 71 (273)
T 2ggs_A 1 MRTLITGASGQLGIELSRLLSE-RHEVIKVYNSSEIQ-----GG---YKLDLTDFPRLEDFIIKKRPDVIINAAAMTDVD 71 (273)
T ss_dssp CCEEEETTTSHHHHHHHHHHTT-TSCEEEEESSSCCT-----TC---EECCTTSHHHHHHHHHHHCCSEEEECCCCCCHH
T ss_pred CEEEEECCCChhHHHHHHHHhc-CCeEEEecCCCcCC-----CC---ceeccCCHHHHHHHHHhcCCCEEEECCcccChh
Confidence 5899999 99999999999995 89999999986431 23 7899999764 55554 99999999754321
Q ss_pred CCCCCh------hhhHHHHHHHHhhcCCccEEEEEccceeecCCCCccccCCCCCCCCChhHHHHHHHHHHHHHhhhhcC
Q 017914 135 EGTGDP------MLKHGELLRSTLMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANPTTELGRLRLSAEKGWLNLGRDLG 208 (364)
Q Consensus 135 ~~~~~~------~~~~~~~l~~a~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~ 208 (364)
....+. ......++++++...++ +|||+||..+|+.... +++|+.+..|.+.|+.+|.++|.+++.
T Consensus 72 ~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~iv~~SS~~~~~~~~~-~~~e~~~~~~~~~Y~~sK~~~e~~~~~------ 143 (273)
T 2ggs_A 72 KCEIEKEKAYKINAEAVRHIVRAGKVIDS-YIVHISTDYVFDGEKG-NYKEEDIPNPINYYGLSKLLGETFALQ------ 143 (273)
T ss_dssp HHHHCHHHHHHHHTHHHHHHHHHHHHTTC-EEEEEEEGGGSCSSSC-SBCTTSCCCCSSHHHHHHHHHHHHHCC------
T ss_pred hhhhCHHHHHHHhHHHHHHHHHHHHHhCC-eEEEEecceeEcCCCC-CcCCCCCCCCCCHHHHHHHHHHHHHhC------
Confidence 000111 22345678888877776 8999999999986554 789999988999999999999999864
Q ss_pred CcEEEEEecceecCCCChHHHHHHhcCcccccccccCCcccccccHHHHHHHHHHHccCCCCCceEEEeCCCCCCHHHHH
Q 017914 209 ISAQVFRLGGIYGPGRSSVDTIIKQLPLSEGQKMRRARQYTSRIHVDDICQVLSASIDKPSAWNVYNVVDDDPAPREEVF 288 (364)
Q Consensus 209 ~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~~g~~~~i~~~~~~s~~el~ 288 (364)
++++++||+.+||+ ..+...+............ .+. .++++|++|+|++++.+++++. +++||+++ +.+|+.|++
T Consensus 144 ~~~~~iR~~~v~G~-~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~dva~~i~~~~~~~~-~g~~~i~~-~~~s~~e~~ 218 (273)
T 2ggs_A 144 DDSLIIRTSGIFRN-KGFPIYVYKTLKEGKTVFA-FKG-YYSPISARKLASAILELLELRK-TGIIHVAG-ERISRFELA 218 (273)
T ss_dssp TTCEEEEECCCBSS-SSHHHHHHHHHHTTCCEEE-ESC-EECCCBHHHHHHHHHHHHHHTC-CEEEECCC-CCEEHHHHH
T ss_pred CCeEEEeccccccc-cHHHHHHHHHHHcCCCEEe-ecC-CCCceEHHHHHHHHHHHHhcCc-CCeEEECC-CcccHHHHH
Confidence 67899999999983 3343333222110111111 122 6889999999999999998765 45999999 999999999
Q ss_pred HHHHHHhcCCCCCcccCCCCCCCCCCCccCCCCCCCeEEEchhHHHhcCccc-CCCCHHHHH
Q 017914 289 AYAWDLVEKKWPGLLKHRKPRENTESSNEKGSSRGEKRVSNVRMKKELGVRL-WHPSYKSGL 349 (364)
Q Consensus 289 ~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p-~~~~~~e~l 349 (364)
+.+.+.+|.+.+....... . ........+..+|++|++++|||+| .+ +++|++
T Consensus 219 ~~~~~~~g~~~~~~~~~~~----~---~~~~~~~~~~~~d~~k~~~~lG~~p~~~-~l~~~~ 272 (273)
T 2ggs_A 219 LKIKEKFNLPGEVKEVDEV----R---GWIAKRPYDSSLDSSRARKILSTDFYTL-DLDGMV 272 (273)
T ss_dssp HHHHHHTTCCSCEEEESSC----T---TCCSCCCSBCCBCCHHHHHHCSSCCCSC-CGGGCC
T ss_pred HHHHHHhCCChhhcccccc----c---ccccCCCcccccCHHHHHHHhCCCCCCc-cccccc
Confidence 9999999987432211100 0 0112234567899999999999999 45 788865
|
| >2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-33 Score=248.88 Aligned_cols=266 Identities=14% Similarity=0.107 Sum_probs=193.9
Q ss_pred eEEEEc-CChhhHHHHHHHHhC--CCEEEEEEeCchhhhhhhhCCceEEEccCChhhH--HhhccCceeeEEEEecCCCC
Q 017914 61 RMLILG-MGFVGRIFAEKIKNQ--GWVVSGTCTNVMKKKELEQSGFDVHLFNANETAL--MILTTLKNYTHLLVSIPPLE 135 (364)
Q Consensus 61 ~vlVtG-tG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~--~~~~~~d~v~~~~~~~~~~~ 135 (364)
+||||| ||+||++++++|+++ |++|++++|++.+...+...+++++.+|++|++. ..++++|.|+|+++...
T Consensus 1 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~a~~~~--- 77 (286)
T 2zcu_A 1 MIAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQALAAQGITVRQADYGDEAALTSALQGVEKLLLISSSEV--- 77 (286)
T ss_dssp CEEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTCHHHHHTTCEEEECCTTCHHHHHHHTTTCSEEEECC-------
T ss_pred CEEEEcCCchHHHHHHHHHHhhCCCceEEEEEcChHhhhhhhcCCCeEEEcCCCCHHHHHHHHhCCCEEEEeCCCCc---
Confidence 589999 999999999999998 9999999998877666655789999999999774 67789999999987421
Q ss_pred CCCChhhhHHHHHHHHhhcCCccEEEEEccceeecCCCCccccCCCCCCCCChhHHHHHHHHHHHHHhhhhcCCcEEEEE
Q 017914 136 GTGDPMLKHGELLRSTLMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANPTTELGRLRLSAEKGWLNLGRDLGISAQVFR 215 (364)
Q Consensus 136 ~~~~~~~~~~~~l~~a~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR 215 (364)
+.......++++++++.++++|||+||.++|. ....|+.+|..+|+++++ .+++++++|
T Consensus 78 ---~~~~~~~~~l~~a~~~~~~~~~v~~Ss~~~~~--------------~~~~y~~sK~~~e~~~~~----~~~~~~ilr 136 (286)
T 2zcu_A 78 ---GQRAPQHRNVINAAKAAGVKFIAYTSLLHADT--------------SPLGLADEHIETEKMLAD----SGIVYTLLR 136 (286)
T ss_dssp -------CHHHHHHHHHHHHTCCEEEEEEETTTTT--------------CCSTTHHHHHHHHHHHHH----HCSEEEEEE
T ss_pred ---hHHHHHHHHHHHHHHHcCCCEEEEECCCCCCC--------------CcchhHHHHHHHHHHHHH----cCCCeEEEe
Confidence 12345678999999888899999999987761 114799999999999864 589999999
Q ss_pred ecceecCCCChHHHHHHhcCcccccccccCCcccccccHHHHHHHHHHHccCCC-CCceEEEeCCCCCCHHHHHHHHHHH
Q 017914 216 LGGIYGPGRSSVDTIIKQLPLSEGQKMRRARQYTSRIHVDDICQVLSASIDKPS-AWNVYNVVDDDPAPREEVFAYAWDL 294 (364)
Q Consensus 216 p~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~-~g~~~~i~~~~~~s~~el~~~i~~~ 294 (364)
|+.++++....+........+ ..+.+++.++|+|++|+|++++.+++++. .|++||+++++.+|+.|+++.+.+.
T Consensus 137 p~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~g~~~~i~~~~~~s~~e~~~~i~~~ 212 (286)
T 2zcu_A 137 NGWYSENYLASAPAALEHGVF----IGAAGDGKIASATRADYAAAAARVISEAGHEGKVYELAGDSAWTLTQLAAELTKQ 212 (286)
T ss_dssp ECCBHHHHHTTHHHHHHHTEE----EESCTTCCBCCBCHHHHHHHHHHHHHSSSCTTCEEEECCSSCBCHHHHHHHHHHH
T ss_pred ChHHhhhhHHHhHHhhcCCce----eccCCCCccccccHHHHHHHHHHHhcCCCCCCceEEEeCCCcCCHHHHHHHHHHH
Confidence 987766543333333333221 12345678999999999999999998763 5889999999899999999999999
Q ss_pred hcCCCCCcccCCCCC-----CCCCCCcc-C--------CCCCCCeEEEchhHHHhcCcccCCCCHHHHHHHHHHHhc
Q 017914 295 VEKKWPGLLKHRKPR-----ENTESSNE-K--------GSSRGEKRVSNVRMKKELGVRLWHPSYKSGLQSIINQMD 357 (364)
Q Consensus 295 ~g~~~~~~~~~~~~~-----~~~~~~~~-~--------~~~~~~~~~d~~k~~~~lG~~p~~~~~~e~l~~~~~~~~ 357 (364)
+|.+.+. ...+... .....+.. . .........|++|+++.|||.+ . +++|+|+++++|+.
T Consensus 213 ~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~-~-~~~e~l~~~~~~~~ 286 (286)
T 2zcu_A 213 SGKQVTY-QNLSEADFAAALKSVGLPDGLADMLADSDVGASKGGLFDDSKTLSKLIGHPT-T-TLAESVSHLFNVNN 286 (286)
T ss_dssp HSSCCEE-EECCHHHHHHHHTTSSCCHHHHHHHHHHHHHHHTTTTCCCCCHHHHHHTSCC-C-CHHHHHHGGGC---
T ss_pred HCCCCce-eeCCHHHHHHHHHHcCCCHHHHHHHHHHHHHHhCCCCccCchHHHHHhCcCC-C-CHHHHHHHHHhhcC
Confidence 9987421 1111000 00000000 0 0011234568899998999854 4 89999999998863
|
| >4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.5e-33 Score=260.84 Aligned_cols=300 Identities=11% Similarity=0.087 Sum_probs=208.1
Q ss_pred CCCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhh------------------hhhCCceEEEccCChhhH-
Q 017914 56 WQSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKE------------------LEQSGFDVHLFNANETAL- 115 (364)
Q Consensus 56 ~~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~------------------l~~~~~~~~~~D~~~~~~- 115 (364)
...+|+||||| ||+||++|+++|++.|++|++++|+...... ....++.++.+|++|++.
T Consensus 66 ~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l 145 (427)
T 4f6c_A 66 HRPLGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDV 145 (427)
T ss_dssp CCCCEEEEEECTTSHHHHHHHHHHTTTEEEEEEEEECSSHHHHHHHHHHHHHHHSCHHHHHHHHTTEEEEEECC---CCC
T ss_pred CCCCCEEEEecCCcHHHHHHHHHHHcCCCEEEEEECCCChHHHHHHHHHHHHHhccccccccccCceEEEeCCCCCcccC
Confidence 34567999999 9999999999999999999999998762211 112688999999999553
Q ss_pred HhhccCceeeEEEEecCCCCCCC---ChhhhHHHHHHHHhhcCCccEEEEEccceeecC-----CCCccccCCCC---CC
Q 017914 116 MILTTLKNYTHLLVSIPPLEGTG---DPMLKHGELLRSTLMNGHLQWLGYLSSTGVYGH-----SGGAWVDEDYP---AN 184 (364)
Q Consensus 116 ~~~~~~d~v~~~~~~~~~~~~~~---~~~~~~~~~l~~a~~~~~~~r~v~~Ss~~vy~~-----~~~~~~~E~~~---~~ 184 (364)
..+.++|+|+|+++.......+. ..+.....++++++.. ++++|||+||..+ |. ....+++|+++ ..
T Consensus 146 ~~~~~~d~Vih~A~~~~~~~~~~~~~~~Nv~g~~~l~~aa~~-~~~~~v~~SS~~~-G~~~~~~~~~~~~~E~~~~~~~~ 223 (427)
T 4f6c_A 146 VLPENMDTIIHAGARTDHFGDDDEFEKVNVQGTVDVIRLAQQ-HHARLIYVSTISV-GTYFDIDTEDVTFSEADVYKGQL 223 (427)
T ss_dssp CCSSCCSEEEECCCCC-------CHHHHHHHHHHHHHHHHHH-TTCEEEEEEEGGG-GSEECSSCSCCEECTTCSCSSCC
T ss_pred CCcCCCCEEEECCcccCCCCCHHHHHHHHHHHHHHHHHHHHh-cCCcEEEECchHh-CCCccCCCCCccccccccccCCC
Confidence 55678999999998754332222 2234456788888888 7899999999988 53 23457888887 45
Q ss_pred CCChhHHHHHHHHHHHHHhhhhcCCcEEEEEecceecCCCCh----------HHHHHHhcCcccccccccCCcccccccH
Q 017914 185 PTTELGRLRLSAEKGWLNLGRDLGISAQVFRLGGIYGPGRSS----------VDTIIKQLPLSEGQKMRRARQYTSRIHV 254 (364)
Q Consensus 185 ~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilRp~~v~g~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~i~v 254 (364)
+.+.|+.+|+++|.+++++++ .|++++++|||.+||+.... +..++...........+.+++.++|+++
T Consensus 224 ~~~~Y~~sK~~~E~~~~~~~~-~g~~~~ivRpg~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v 302 (427)
T 4f6c_A 224 LTSPYTRSKFYSELKVLEAVN-NGLDGRIVRVGNLTSPYNGRWHMRNIKTNRFSMVMNDLLQLDCIGVSMAEMPVDFSFV 302 (427)
T ss_dssp CCSHHHHHHHHHHHHHHHHHH-TTCCEEEEEECCEESCSSSCCCCTTGGGCHHHHHHHHHHHSSEEEHHHHTCEECCEEH
T ss_pred CCCchHHHHHHHHHHHHHHHH-cCCCEEEEeCCeeecCCCCCccccCcchHHHHHHHHHHHhcCCCCCccccceEEEeeH
Confidence 789999999999999998764 69999999999999987532 3333333111111111335788999999
Q ss_pred HHHHHHHHHHccCCCCCceEEEeCCCCCCHHHHHHHHHHHhcCCCCCcccC-CCCCCCCCCCcc-----CCCCCCCeEEE
Q 017914 255 DDICQVLSASIDKPSAWNVYNVVDDDPAPREEVFAYAWDLVEKKWPGLLKH-RKPRENTESSNE-----KGSSRGEKRVS 328 (364)
Q Consensus 255 ~Dva~~~~~~l~~~~~g~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~-~~~~~~~~~~~~-----~~~~~~~~~~d 328 (364)
+|+|++++.++..+..|++||+++++++++.|+++.+.+ +|.+......+ ..... ...... .........+|
T Consensus 303 ~DvA~ai~~~~~~~~~g~~~~l~~~~~~s~~el~~~i~~-~g~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~d 380 (427)
T 4f6c_A 303 DTTARQIVALAQVNTPQIIYHVLSPNKMPVKSLLECVKR-KEIELVSDESFNEILQK-QDMYETIGLTSVDREQQLAMID 380 (427)
T ss_dssp HHHHHHHHHHTTSCCCCSEEEESCSCCEEHHHHHHHHHS-SCCEEECHHHHHHHHHH-TTCHHHHHHHHHHHTSEECEEC
T ss_pred HHHHHHHHHHHcCCCCCCEEEecCCCCCcHHHHHHHHHH-cCCcccCHHHHHHHHHh-cCchhhhhhhhccccCCceecc
Confidence 999999999999887889999999999999999999998 55220000000 00000 000000 00122246778
Q ss_pred chhHH---HhcCcccCCCCHHHHHHHHHHHhcccCC
Q 017914 329 NVRMK---KELGVRLWHPSYKSGLQSIINQMDQPYQ 361 (364)
Q Consensus 329 ~~k~~---~~lG~~p~~~~~~e~l~~~~~~~~~~~~ 361 (364)
+++.. +++||++.. .-++.++.+++++++.+.
T Consensus 381 ~~~~~~~l~~~G~~~~~-~~~~~l~~~~~~l~~~~~ 415 (427)
T 4f6c_A 381 TTLTLKIMNHISEKWPT-ITNNWLYHWAQYIKTIFN 415 (427)
T ss_dssp CHHHHHHHHHTTCCCCC-CCHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHhcCCCCCC-CCHHHHHHHHHHHHHHHh
Confidence 88877 457997663 346689999999887664
|
| >4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.6e-33 Score=265.66 Aligned_cols=301 Identities=11% Similarity=0.074 Sum_probs=211.9
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhh------------------hhhCCceEEEccCChhh-HH
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKE------------------LEQSGFDVHLFNANETA-LM 116 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~------------------l~~~~~~~~~~D~~~~~-~~ 116 (364)
..+|+||||| |||||++|+++|+++|++|++++|+...... ....++.++.+|+++++ +.
T Consensus 148 ~~~~~VLVTGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~ 227 (508)
T 4f6l_B 148 RPLGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDVV 227 (508)
T ss_dssp CCCEEEEESCTTSHHHHHHHHHTBTTEEEEEEEEESSSHHHHHHHHHHHHHHHSCHHHHHHHSTTEEEEEEBTTBCSSCC
T ss_pred CCCCeEEEECCccchHHHHHHHHHhcCCEEEEEECCCChHHHHHHHHHHHHHhcccccchhccCceEEEecCCcccccCC
Confidence 3468999999 9999999999999999999999998763211 12368999999999954 35
Q ss_pred hhccCceeeEEEEecCCCCC---CCChhhhHHHHHHHHhhcCCccEEEEEcccee--ecC--CCCccccCCCC---CCCC
Q 017914 117 ILTTLKNYTHLLVSIPPLEG---TGDPMLKHGELLRSTLMNGHLQWLGYLSSTGV--YGH--SGGAWVDEDYP---ANPT 186 (364)
Q Consensus 117 ~~~~~d~v~~~~~~~~~~~~---~~~~~~~~~~~l~~a~~~~~~~r~v~~Ss~~v--y~~--~~~~~~~E~~~---~~~~ 186 (364)
...++|+|+|+++....... ....+.....++++++.. ++++|||+||.++ |.. ....+++|+++ ..+.
T Consensus 228 ~~~~~D~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~-~~~~~v~iSS~~vG~~~~~~~~~~~~~E~~~~~~~~~~ 306 (508)
T 4f6l_B 228 LPENMDTIIHAGARTDHFGDDDEFEKVNVQGTVDVIRLAQQ-HHARLIYVSTISVGTYFDIDTEDVTFSEADVYKGQLLT 306 (508)
T ss_dssp CSSCCSEEEECCCC--------CCHHHHHHHHHHHHHHHHT-TTCEEEEEEESCTTSEECTTCSCCEECTTCSCSSBCCC
T ss_pred CccCCCEEEECCceecCCCCHHHHhhhHHHHHHHHHHHHHh-CCCcEEEeCChhhccCCccCCcCcccccccccccccCC
Confidence 56789999999987643222 223345567788888887 6789999999988 221 23457888876 3478
Q ss_pred ChhHHHHHHHHHHHHHhhhhcCCcEEEEEecceecCCCCh----------HHHHHHhcCcccccccccCCcccccccHHH
Q 017914 187 TELGRLRLSAEKGWLNLGRDLGISAQVFRLGGIYGPGRSS----------VDTIIKQLPLSEGQKMRRARQYTSRIHVDD 256 (364)
Q Consensus 187 ~~Y~~sK~~~E~~~~~~~~~~~~~~~ilRp~~v~g~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D 256 (364)
+.|+.+|+.+|++++++.+ .|++++++||+.+||+.... +..++...........+.+++.++|+|++|
T Consensus 307 ~~Y~~sK~~~E~~~~~~~~-~gi~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~~~~~~v~v~D 385 (508)
T 4f6l_B 307 SPYTRSKFYSELKVLEAVN-NGLDGRIVRVGNLTSPYNGRWHMRNIKTNRFSMVMNDLLQLDCIGVSMAEMPVDFSFVDT 385 (508)
T ss_dssp SHHHHHHHHHHHHHHHHHH-TTCEEEEEEECCEESCSSSCCCCTTCTTCHHHHHHHHHTTCSEEETTGGGSEEECEEHHH
T ss_pred CcHHHHHHHHHHHHHHHHH-cCCCEEEEecceeccCCCCCcccCCcchHHHHHHHHHHHHcCCCCCCccCceEEEEcHHH
Confidence 9999999999999998764 69999999999999987432 334444321111112234678899999999
Q ss_pred HHHHHHHHccCCCCCceEEEeCCCCCCHHHHHHHHHHHhcCCCCC-cccCCCCCCCCCCC---cc-CCCCCCCeEEEchh
Q 017914 257 ICQVLSASIDKPSAWNVYNVVDDDPAPREEVFAYAWDLVEKKWPG-LLKHRKPRENTESS---NE-KGSSRGEKRVSNVR 331 (364)
Q Consensus 257 va~~~~~~l~~~~~g~~~~i~~~~~~s~~el~~~i~~~~g~~~~~-~~~~~~~~~~~~~~---~~-~~~~~~~~~~d~~k 331 (364)
+|++++.++.++..+++||+++++.+++.|+++.+.+.. .+... ..+..........+ .. .........+|+++
T Consensus 386 vA~ai~~~~~~~~~~~~~nl~~~~~~s~~el~~~i~~~~-~~~~~~~~w~~~l~~~~~~~~~~~~~~~~~~~~~~~d~~~ 464 (508)
T 4f6l_B 386 TARQIVALAQVNTPQIIYHVLSPNKMPVKSLLECVKRKE-IELVSDESFNEILQKQDMYETIGLTSVDREQQLAMIDTTL 464 (508)
T ss_dssp HHHHHHHHTTBCCSCSEEEESCSCEEEHHHHHHHHHSSC-CEEECHHHHHHHHHTTCCHHHHHHHHTGGGSEECEECCHH
T ss_pred HHHHHHHHHhCCCCCCEEEeCCCCCCCHHHHHHHHHHcC-CcccCHHHHHHHHHhcCCccchhcccccccCcceecchHH
Confidence 999999999987788999999999999999999999764 22000 00000000000000 00 01122245678877
Q ss_pred HH---HhcCcccCCCCHHHHHHHHHHHhcccCC
Q 017914 332 MK---KELGVRLWHPSYKSGLQSIINQMDQPYQ 361 (364)
Q Consensus 332 ~~---~~lG~~p~~~~~~e~l~~~~~~~~~~~~ 361 (364)
.+ +++||.+.. ..++.++++++++++.+.
T Consensus 465 ~~~~l~~~G~~~~~-~~~~~l~~~~~~~~~~~~ 496 (508)
T 4f6l_B 465 TLKIMNHISEKWPT-ITNNWLYHWAQYIKTIFN 496 (508)
T ss_dssp HHHHHHHHSCCCCC-CCHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHcCCCCCC-CCHHHHHHHHHHHHHHHH
Confidence 66 457998664 458889999999988765
|
| >4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.97 E-value=5.9e-31 Score=249.41 Aligned_cols=242 Identities=13% Similarity=0.111 Sum_probs=185.7
Q ss_pred CCCCCeEEEEc-CChhhHHHHHHHHhC---CCEEEEEEeCchhhhhh---------------------hhCCceEEEccC
Q 017914 56 WQSPNRMLILG-MGFVGRIFAEKIKNQ---GWVVSGTCTNVMKKKEL---------------------EQSGFDVHLFNA 110 (364)
Q Consensus 56 ~~~~~~vlVtG-tG~iG~~l~~~L~~~---g~~V~~~~r~~~~~~~l---------------------~~~~~~~~~~D~ 110 (364)
...+|+||||| |||||++|+++|+++ |++|++++|+......+ ...++.++.+|+
T Consensus 70 ~~~~~~VLVTGatG~IG~~l~~~Ll~~~~~g~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl 149 (478)
T 4dqv_A 70 SPELRTVLLTGATGFLGRYLVLELLRRLDVDGRLICLVRAESDEDARRRLEKTFDSGDPELLRHFKELAADRLEVVAGDK 149 (478)
T ss_dssp CSCCCEEEEECTTSHHHHHHHHHHHHHSCTTCEEEEEECSSSHHHHHHHHHGGGCSSCHHHHHHHHHHHTTTEEEEECCT
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHhcCCCCCEEEEEECCCCcHHHHHHHHHHHHhcchhhhhhhhhhccCceEEEEeEC
Confidence 34678999999 999999999999999 99999999986543211 125789999999
Q ss_pred Chhh-------H-HhhccCceeeEEEEecCCCCCCC---ChhhhHHHHHHHHhhcCCccEEEEEccceeecCCCCccccC
Q 017914 111 NETA-------L-MILTTLKNYTHLLVSIPPLEGTG---DPMLKHGELLRSTLMNGHLQWLGYLSSTGVYGHSGGAWVDE 179 (364)
Q Consensus 111 ~~~~-------~-~~~~~~d~v~~~~~~~~~~~~~~---~~~~~~~~~l~~a~~~~~~~r~v~~Ss~~vy~~~~~~~~~E 179 (364)
++++ + ..++++|+|+|+++.... ..+. ..+.....++++++...++++|||+||.++|+.....+++|
T Consensus 150 ~~~~~gld~~~~~~~~~~~D~Vih~Aa~~~~-~~~~~~~~~Nv~gt~~ll~aa~~~~~~~~V~iSS~~v~~~~~~~~~~E 228 (478)
T 4dqv_A 150 SEPDLGLDQPMWRRLAETVDLIVDSAAMVNA-FPYHELFGPNVAGTAELIRIALTTKLKPFTYVSTADVGAAIEPSAFTE 228 (478)
T ss_dssp TSGGGGCCHHHHHHHHHHCCEEEECCSSCSB-SSCCEEHHHHHHHHHHHHHHHTSSSCCCEEEEEEGGGGTTSCTTTCCS
T ss_pred CCcccCCCHHHHHHHHcCCCEEEECccccCC-cCHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeehhhcCccCCCCcCC
Confidence 8543 2 556789999999987654 2221 23345567889999888999999999999999877777888
Q ss_pred CCCCCCCC-----------hhHHHHHHHHHHHHHhhhhcCCcEEEEEecceecCCC--------ChHHHHHHh-c---Cc
Q 017914 180 DYPANPTT-----------ELGRLRLSAEKGWLNLGRDLGISAQVFRLGGIYGPGR--------SSVDTIIKQ-L---PL 236 (364)
Q Consensus 180 ~~~~~~~~-----------~Y~~sK~~~E~~~~~~~~~~~~~~~ilRp~~v~g~~~--------~~~~~~~~~-~---~~ 236 (364)
+.+..|.+ .|+.+|+.+|.++++++++.+++++++|||++||+.. .++..++.. . ..
T Consensus 229 ~~~~~p~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ivRpg~v~G~~~~~g~~~~~~~~~~l~~~~~~~g~~ 308 (478)
T 4dqv_A 229 DADIRVISPTRTVDGGWAGGYGTSKWAGEVLLREANDLCALPVAVFRCGMILADTSYAGQLNMSDWVTRMVLSLMATGIA 308 (478)
T ss_dssp SSCHHHHCCEEECCTTSEECHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECCSSSSSCCCTTBHHHHHHHHHHHHCEE
T ss_pred cccccccCcccccccccccchHHHHHHHHHHHHHHHHHhCCCeEEEECceeeCCCccCCcCCHHHHHHHHHHHHHHcCcc
Confidence 87654433 4999999999999999887899999999999999743 133333332 1 11
Q ss_pred cc--ccccc---cCCcccccccHHHHHHHHHHHccC----C-CCCceEEEeCCCC--CCHHHHHHHHHHHhcCCC
Q 017914 237 SE--GQKMR---RARQYTSRIHVDDICQVLSASIDK----P-SAWNVYNVVDDDP--APREEVFAYAWDLVEKKW 299 (364)
Q Consensus 237 ~~--~~~~~---~~~~~~~~i~v~Dva~~~~~~l~~----~-~~g~~~~i~~~~~--~s~~el~~~i~~~~g~~~ 299 (364)
+. ....+ .+++.++|+|++|+|++++.++.+ + ..+++||+++++. +++.|+++.+.+. |.+.
T Consensus 309 P~~~~~~~~~G~~~~~~~~~v~vdDvA~ai~~~~~~~~~~~~~~~~~ynv~~~~~~~~s~~el~~~l~~~-g~~~ 382 (478)
T 4dqv_A 309 PRSFYEPDSEGNRQRAHFDGLPVTFVAEAIAVLGARVAGSSLAGFATYHVMNPHDDGIGLDEYVDWLIEA-GYPI 382 (478)
T ss_dssp ESCSBCCCTTSCCCCCCCCEEEHHHHHHHHHHHHHTTC-CCCCSEEEEEESCCCCSSCSHHHHHHHHHHT-TCSC
T ss_pred cccccccccccccccceeeeeeHHHHHHHHHHHHhhcccCCCCCCceEEecCCCCCCcCHHHHHHHHHHc-CCCc
Confidence 10 00001 126789999999999999999875 2 4478999999988 9999999999996 7664
|
| >3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens} | Back alignment and structure |
|---|
Probab=99.97 E-value=2.2e-31 Score=233.79 Aligned_cols=230 Identities=16% Similarity=0.111 Sum_probs=181.8
Q ss_pred CCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCChhhH--HhhccCceeeEEEEecCCCC
Q 017914 59 PNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETAL--MILTTLKNYTHLLVSIPPLE 135 (364)
Q Consensus 59 ~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~--~~~~~~d~v~~~~~~~~~~~ 135 (364)
||+||||| +|+||++|+++|+++|++|++++|+..+.. ..++.++.+|++|.+. ..++++|.|+|+++.... .
T Consensus 2 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~---~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~a~~~~~-~ 77 (267)
T 3ay3_A 2 LNRLLVTGAAGGVGSAIRPHLGTLAHEVRLSDIVDLGAA---EAHEEIVACDLADAQAVHDLVKDCDGIIHLGGVSVE-R 77 (267)
T ss_dssp EEEEEEESTTSHHHHHHGGGGGGTEEEEEECCSSCCCCC---CTTEEECCCCTTCHHHHHHHHTTCSEEEECCSCCSC-C
T ss_pred CceEEEECCCCHHHHHHHHHHHhCCCEEEEEeCCCcccc---CCCccEEEccCCCHHHHHHHHcCCCEEEECCcCCCC-C
Confidence 46899999 999999999999999999999999865421 1467889999999764 677899999999975421 1
Q ss_pred CCC---ChhhhHHHHHHHHhhcCCccEEEEEccceeecCC-CCccccCCCCCCCCChhHHHHHHHHHHHHHhhhhcCCcE
Q 017914 136 GTG---DPMLKHGELLRSTLMNGHLQWLGYLSSTGVYGHS-GGAWVDEDYPANPTTELGRLRLSAEKGWLNLGRDLGISA 211 (364)
Q Consensus 136 ~~~---~~~~~~~~~l~~a~~~~~~~r~v~~Ss~~vy~~~-~~~~~~E~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~ 211 (364)
.+. +.+.....++++++...++++|||+||..+|+.. ...+++|+++..|.+.|+.+|..+|.+++.++++.++++
T Consensus 78 ~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~~~~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~gi~~ 157 (267)
T 3ay3_A 78 PWNDILQANIIGAYNLYEAARNLGKPRIVFASSNHTIGYYPRTTRIDTEVPRRPDSLYGLSKCFGEDLASLYYHKFDIET 157 (267)
T ss_dssp CHHHHHHHTHHHHHHHHHHHHHTTCCEEEEEEEGGGSTTSBTTSCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHTTCCCE
T ss_pred CHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeCCHHHhCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHcCCCE
Confidence 111 1122345678888888889999999999999864 346799999999999999999999999998887789999
Q ss_pred EEEEecceecCCCChHHHHHHhcCcccccccccCCcccccccHHHHHHHHHHHccCCCC-CceEEEeCCCCCCHHHHHHH
Q 017914 212 QVFRLGGIYGPGRSSVDTIIKQLPLSEGQKMRRARQYTSRIHVDDICQVLSASIDKPSA-WNVYNVVDDDPAPREEVFAY 290 (364)
Q Consensus 212 ~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~~-g~~~~i~~~~~~s~~el~~~ 290 (364)
+++||+.+|+... .+...++|+|++|+|++++.+++++.. +++|++.++..
T Consensus 158 ~~lrp~~v~~~~~-------------------~~~~~~~~~~~~dva~~~~~~~~~~~~~~~~~~~~~~~~--------- 209 (267)
T 3ay3_A 158 LNIRIGSCFPKPK-------------------DARMMATWLSVDDFMRLMKRAFVAPKLGCTVVYGASANT--------- 209 (267)
T ss_dssp EEEEECBCSSSCC-------------------SHHHHHHBCCHHHHHHHHHHHHHSSCCCEEEEEECCSCS---------
T ss_pred EEEeceeecCCCC-------------------CCCeeeccccHHHHHHHHHHHHhCCCCCceeEecCCCcc---------
Confidence 9999999984311 123457889999999999999998765 46777754320
Q ss_pred HHHHhcCCCCCcccCCCCCCCCCCCccCCCCCCCeEEEchhHHHhcCcccCCCCHHHHHHHHHHH
Q 017914 291 AWDLVEKKWPGLLKHRKPRENTESSNEKGSSRGEKRVSNVRMKKELGVRLWHPSYKSGLQSIINQ 355 (364)
Q Consensus 291 i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~e~l~~~~~~ 355 (364)
..+.|..++ +.|||+|++ +++++++++++.
T Consensus 210 ---------------------------------~~~~d~~~~-~~lg~~p~~-~~~~~~~~~~~~ 239 (267)
T 3ay3_A 210 ---------------------------------ESWWDNDKS-AFLGWVPQD-SSEIWREEIEQQ 239 (267)
T ss_dssp ---------------------------------SCCBCCGGG-GGGCCCCCC-CGGGGHHHHHHS
T ss_pred ---------------------------------ccccCHHHH-HHcCCCCCC-CHHHHHHHHHhh
Confidence 123466788 789999998 899999998763
|
| >3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334} | Back alignment and structure |
|---|
Probab=99.97 E-value=7.5e-30 Score=218.00 Aligned_cols=217 Identities=13% Similarity=0.104 Sum_probs=163.1
Q ss_pred CeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCChhhHHhhccCceeeEEEEecCCCCCCC
Q 017914 60 NRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETALMILTTLKNYTHLLVSIPPLEGTG 138 (364)
Q Consensus 60 ~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~~~~~~~d~v~~~~~~~~~~~~~~ 138 (364)
|+||||| ||+||++|+++|+++|++|++++|++.+...+...+++++.+|++|.+...+.++|+|+|+++..... ...
T Consensus 1 MkilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~d~vi~~ag~~~~~-~~~ 79 (224)
T 3h2s_A 1 MKIAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQKAADRLGATVATLVKEPLVLTEADLDSVDAVVDALSVPWGS-GRG 79 (224)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHTCTTSEEEECCGGGCCHHHHTTCSEEEECCCCCTTS-SCT
T ss_pred CEEEEEcCCCHHHHHHHHHHHHCCCEEEEEEecccccccccCCCceEEecccccccHhhcccCCEEEECCccCCCc-chh
Confidence 6899999 99999999999999999999999998887776667899999999997667778999999999865221 123
Q ss_pred ChhhhHHHHHHHHhhcCCccEEEEEccceeecCCCC---ccccCCCCCCCCChhHHHHHHHHHHHHHhhhhcCCcEEEEE
Q 017914 139 DPMLKHGELLRSTLMNGHLQWLGYLSSTGVYGHSGG---AWVDEDYPANPTTELGRLRLSAEKGWLNLGRDLGISAQVFR 215 (364)
Q Consensus 139 ~~~~~~~~~l~~a~~~~~~~r~v~~Ss~~vy~~~~~---~~~~E~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR 215 (364)
........++++++++.+ +|+|++||.+.+..... .+.+|.....|.+.|+.+|...|. +..+.+..+++++++|
T Consensus 80 ~~n~~~~~~l~~a~~~~~-~~~v~~SS~~~~~~~~~~~~~~~~~~~~~~~~~~y~~sK~~~e~-~~~~~~~~~i~~~ivr 157 (224)
T 3h2s_A 80 YLHLDFATHLVSLLRNSD-TLAVFILGSASLAMPGADHPMILDFPESAASQPWYDGALYQYYE-YQFLQMNANVNWIGIS 157 (224)
T ss_dssp HHHHHHHHHHHHTCTTCC-CEEEEECCGGGSBCTTCSSCGGGGCCGGGGGSTTHHHHHHHHHH-HHHHTTCTTSCEEEEE
T ss_pred hHHHHHHHHHHHHHHHcC-CcEEEEecceeeccCCCCccccccCCCCCccchhhHHHHHHHHH-HHHHHhcCCCcEEEEc
Confidence 345566789999999888 99999999765443222 245555555568899999999995 4455566799999999
Q ss_pred ecceecCCCChHHHHHHhcCcccccccccCCcccccccHHHHHHHHHHHccCCCC-CceEEEeCCCCCCHHH
Q 017914 216 LGGIYGPGRSSVDTIIKQLPLSEGQKMRRARQYTSRIHVDDICQVLSASIDKPSA-WNVYNVVDDDPAPREE 286 (364)
Q Consensus 216 p~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~~-g~~~~i~~~~~~s~~e 286 (364)
|+.+||++...- +... ...+..+.+..++++++|+|++++.+++++.. |++|++++.+..++.|
T Consensus 158 p~~v~g~~~~~~--~~~~-----~~~~~~~~~~~~~i~~~DvA~~~~~~l~~~~~~g~~~~~~~~~~~~~~~ 222 (224)
T 3h2s_A 158 PSEAFPSGPATS--YVAG-----KDTLLVGEDGQSHITTGNMALAILDQLEHPTAIRDRIVVRDADLEHHHH 222 (224)
T ss_dssp ECSBCCCCCCCC--EEEE-----SSBCCCCTTSCCBCCHHHHHHHHHHHHHSCCCTTSEEEEEECC------
T ss_pred CccccCCCcccC--ceec-----ccccccCCCCCceEeHHHHHHHHHHHhcCccccCCEEEEecCcchhccc
Confidence 999999853211 1000 01112234457889999999999999998854 8999999987776654
|
| >3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=6e-30 Score=233.08 Aligned_cols=222 Identities=16% Similarity=0.049 Sum_probs=173.2
Q ss_pred CCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCc----hhhh---hhhhCCceEEEccCChhhH--Hhhc--cCceee
Q 017914 58 SPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNV----MKKK---ELEQSGFDVHLFNANETAL--MILT--TLKNYT 125 (364)
Q Consensus 58 ~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~----~~~~---~l~~~~~~~~~~D~~~~~~--~~~~--~~d~v~ 125 (364)
.+|+||||| ||+||++|++.|+++|++|++++|+. .+.. .+...+++++.+|++|.+. .+++ ++|+|+
T Consensus 9 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~~~d~Vi 88 (346)
T 3i6i_A 9 PKGRVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKIFKALEDKGAIIVYGLINEQEAMEKILKEHEIDIVV 88 (346)
T ss_dssp --CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHHHTTCCEEE
T ss_pred CCCeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCCCCChhHHHHHHHHHhCCcEEEEeecCCHHHHHHHHhhCCCCEEE
Confidence 357999999 99999999999999999999999976 2222 2335789999999999774 6777 999999
Q ss_pred EEEEecCCCCCCCChhhhHHHHHHHHhhcCC-ccEEEEEccceeecCCCCccccCCCCCCCCChhHHHHHHHHHHHHHhh
Q 017914 126 HLLVSIPPLEGTGDPMLKHGELLRSTLMNGH-LQWLGYLSSTGVYGHSGGAWVDEDYPANPTTELGRLRLSAEKGWLNLG 204 (364)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~-~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~~sK~~~E~~~~~~~ 204 (364)
|+++.. ....+.|+++++++.+ +++||+ | +||. +.+|..+..|.+.|+.+|..+|+++++
T Consensus 89 ~~a~~~---------n~~~~~~l~~aa~~~g~v~~~v~-S---~~g~----~~~e~~~~~p~~~y~~sK~~~e~~l~~-- 149 (346)
T 3i6i_A 89 STVGGE---------SILDQIALVKAMKAVGTIKRFLP-S---EFGH----DVNRADPVEPGLNMYREKRRVRQLVEE-- 149 (346)
T ss_dssp ECCCGG---------GGGGHHHHHHHHHHHCCCSEEEC-S---CCSS----CTTTCCCCTTHHHHHHHHHHHHHHHHH--
T ss_pred ECCchh---------hHHHHHHHHHHHHHcCCceEEee-c---ccCC----CCCccCcCCCcchHHHHHHHHHHHHHH--
Confidence 998642 4455689999999888 999986 4 3442 356667777888999999999999874
Q ss_pred hhcCCcEEEEEecceecCCCChHHHHH-HhcCcccccccccCCcccccccHHHHHHHHHHHccCCCC-CceEEEeC-CCC
Q 017914 205 RDLGISAQVFRLGGIYGPGRSSVDTII-KQLPLSEGQKMRRARQYTSRIHVDDICQVLSASIDKPSA-WNVYNVVD-DDP 281 (364)
Q Consensus 205 ~~~~~~~~ilRp~~v~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~~-g~~~~i~~-~~~ 281 (364)
.+++++++|||.++|.....+.... ...........+++++.++|+|++|+|++++.++.++.. +++|++++ ++.
T Consensus 150 --~g~~~tivrpg~~~g~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~i~g~~~~ 227 (346)
T 3i6i_A 150 --SGIPFTYICCNSIASWPYYNNIHPSEVLPPTDFFQIYGDGNVKAYFVAGTDIGKFTMKTVDDVRTLNKSVHFRPSCNC 227 (346)
T ss_dssp --TTCCBEEEECCEESSCCCSCC-----CCCCSSCEEEETTSCCCEEEECHHHHHHHHHHHTTCGGGTTEEEECCCGGGE
T ss_pred --cCCCEEEEEecccccccCccccccccccCCCceEEEccCCCceEEecCHHHHHHHHHHHHhCccccCeEEEEeCCCCC
Confidence 5899999999999996533221111 111112223456788899999999999999999998754 78999985 478
Q ss_pred CCHHHHHHHHHHHhcCCCC
Q 017914 282 APREEVFAYAWDLVEKKWP 300 (364)
Q Consensus 282 ~s~~el~~~i~~~~g~~~~ 300 (364)
+|+.|+++.+.+.+|.+.+
T Consensus 228 ~s~~e~~~~~~~~~g~~~~ 246 (346)
T 3i6i_A 228 LNINELASVWEKKIGRTLP 246 (346)
T ss_dssp ECHHHHHHHHHHHHTSCCC
T ss_pred CCHHHHHHHHHHHHCCCCc
Confidence 9999999999999998743
|
| >2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=2.9e-30 Score=234.59 Aligned_cols=225 Identities=13% Similarity=0.114 Sum_probs=174.1
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhC-CC-EEEEEEeCchhhhhhh----hCCceEEEccCChhhH--HhhccCceeeEE
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQ-GW-VVSGTCTNVMKKKELE----QSGFDVHLFNANETAL--MILTTLKNYTHL 127 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~-g~-~V~~~~r~~~~~~~l~----~~~~~~~~~D~~~~~~--~~~~~~d~v~~~ 127 (364)
..+|+||||| ||+||++|+++|+++ |+ +|++++|+..+...+. ..++.++.+|++|.+. .+++++|+|+|+
T Consensus 19 ~~~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~D~Vih~ 98 (344)
T 2gn4_A 19 LDNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFNDPRMRFFIGDVRDLERLNYALEGVDICIHA 98 (344)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHHHHHCCTTEEEEECCTTCHHHHHHHTTTCSEEEEC
T ss_pred hCCCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECChhhHHHHHHHhcCCCEEEEECCCCCHHHHHHHHhcCCEEEEC
Confidence 4568999999 999999999999999 97 9999999876654432 2578999999999774 677899999999
Q ss_pred EEecCCCCCCCCh------hhhHHHHHHHHhhcCCccEEEEEccceeecCCCCccccCCCCCCCCChhHHHHHHHHHHHH
Q 017914 128 LVSIPPLEGTGDP------MLKHGELLRSTLMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANPTTELGRLRLSAEKGWL 201 (364)
Q Consensus 128 ~~~~~~~~~~~~~------~~~~~~~l~~a~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~~sK~~~E~~~~ 201 (364)
++.........++ +.....|+++++...++++||++||..++ .|.+.|+.+|.++|.+++
T Consensus 99 Aa~~~~~~~~~~~~~~~~~Nv~gt~~l~~aa~~~~v~~~V~~SS~~~~--------------~p~~~Y~~sK~~~E~~~~ 164 (344)
T 2gn4_A 99 AALKHVPIAEYNPLECIKTNIMGASNVINACLKNAISQVIALSTDKAA--------------NPINLYGATKLCSDKLFV 164 (344)
T ss_dssp CCCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCGGGS--------------SCCSHHHHHHHHHHHHHH
T ss_pred CCCCCCCchhcCHHHHHHHHHHHHHHHHHHHHhCCCCEEEEecCCccC--------------CCccHHHHHHHHHHHHHH
Confidence 9754311001111 12334688888888899999999996543 245799999999999999
Q ss_pred Hhhhh---cCCcEEEEEecceecCCCChHHHHHHhcCccc-ccccccCCcccccccHHHHHHHHHHHccCCCCCceEEEe
Q 017914 202 NLGRD---LGISAQVFRLGGIYGPGRSSVDTIIKQLPLSE-GQKMRRARQYTSRIHVDDICQVLSASIDKPSAWNVYNVV 277 (364)
Q Consensus 202 ~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~~g~~~~i~ 277 (364)
.++.. .+++++++|||++||+....+..+......+. ...+..+...++|+|++|+|++++.++++...|++|++.
T Consensus 165 ~~~~~~~~~g~~~~~vRpg~v~g~~~~~i~~~~~~~~~g~~~~~i~~~~~~r~~i~v~D~a~~v~~~l~~~~~g~~~~~~ 244 (344)
T 2gn4_A 165 SANNFKGSSQTQFSVVRYGNVVGSRGSVVPFFKKLVQNKASEIPITDIRMTRFWITLDEGVSFVLKSLKRMHGGEIFVPK 244 (344)
T ss_dssp HGGGCCCSSCCEEEEECCCEETTCTTSHHHHHHHHHHHTCCCEEESCTTCEEEEECHHHHHHHHHHHHHHCCSSCEEEEC
T ss_pred HHHHHhCCCCcEEEEEEeccEECCCCCHHHHHHHHHHcCCCceEEeCCCeEEeeEEHHHHHHHHHHHHhhccCCCEEecC
Confidence 88753 57999999999999998776655544311111 112335667789999999999999999987778899987
Q ss_pred CCCCCCHHHHHHHHHHHhc
Q 017914 278 DDDPAPREEVFAYAWDLVE 296 (364)
Q Consensus 278 ~~~~~s~~el~~~i~~~~g 296 (364)
++ .+++.|+++.+.+.++
T Consensus 245 ~~-~~s~~el~~~i~~~~~ 262 (344)
T 2gn4_A 245 IP-SMKMTDLAKALAPNTP 262 (344)
T ss_dssp CC-EEEHHHHHHHHCTTCC
T ss_pred CC-cEEHHHHHHHHHHhCC
Confidence 76 6999999999986553
|
| >3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp} | Back alignment and structure |
|---|
Probab=99.97 E-value=4.2e-30 Score=218.85 Aligned_cols=205 Identities=9% Similarity=0.065 Sum_probs=164.9
Q ss_pred CeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCCh-hhH--HhhccCceeeEEEEecCCCC
Q 017914 60 NRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANE-TAL--MILTTLKNYTHLLVSIPPLE 135 (364)
Q Consensus 60 ~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~-~~~--~~~~~~d~v~~~~~~~~~~~ 135 (364)
|+||||| +|+||++++++|+++|++|++++|++++...+ .+++++.+|++| .+. ..++++|+|+|+++....
T Consensus 1 M~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~--~~~~~~~~D~~d~~~~~~~~~~~~d~vi~~ag~~~~-- 76 (219)
T 3dqp_A 1 MKIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQY--NNVKAVHFDVDWTPEEMAKQLHGMDAIINVSGSGGK-- 76 (219)
T ss_dssp CEEEEESTTSHHHHHHHHHHTTSSCEEEEEESSGGGSCCC--TTEEEEECCTTSCHHHHHTTTTTCSEEEECCCCTTS--
T ss_pred CeEEEECCCCHHHHHHHHHHHHCCCEEEEEECCccchhhc--CCceEEEecccCCHHHHHHHHcCCCEEEECCcCCCC--
Confidence 5899999 99999999999999999999999998766544 689999999999 764 677899999999986542
Q ss_pred CCCChhhhHHHHHHHHhhcCCccEEEEEccceeecCCCCccccCCCCCCCCChhHHHHHHHHHHHHHhhhhcCCcEEEEE
Q 017914 136 GTGDPMLKHGELLRSTLMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANPTTELGRLRLSAEKGWLNLGRDLGISAQVFR 215 (364)
Q Consensus 136 ~~~~~~~~~~~~l~~a~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR 215 (364)
...+.......++++++++.++++|||+||.++++. .+.+| .+..|.+.|+.+|.++|++++ +..+++++++|
T Consensus 77 ~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~~~~---~~~~e-~~~~~~~~Y~~sK~~~e~~~~---~~~~i~~~ilr 149 (219)
T 3dqp_A 77 SLLKVDLYGAVKLMQAAEKAEVKRFILLSTIFSLQP---EKWIG-AGFDALKDYYIAKHFADLYLT---KETNLDYTIIQ 149 (219)
T ss_dssp SCCCCCCHHHHHHHHHHHHTTCCEEEEECCTTTTCG---GGCCS-HHHHHTHHHHHHHHHHHHHHH---HSCCCEEEEEE
T ss_pred CcEeEeHHHHHHHHHHHHHhCCCEEEEECcccccCC---Ccccc-cccccccHHHHHHHHHHHHHH---hccCCcEEEEe
Confidence 223344566789999999999999999999766542 23444 444567899999999999986 36799999999
Q ss_pred ecceecCCCChHHHHHHhcCcccccccccCCcccccccHHHHHHHHHHHccCCCC-CceEEEeCCCCCCHHHHHHH
Q 017914 216 LGGIYGPGRSSVDTIIKQLPLSEGQKMRRARQYTSRIHVDDICQVLSASIDKPSA-WNVYNVVDDDPAPREEVFAY 290 (364)
Q Consensus 216 p~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~~-g~~~~i~~~~~~s~~el~~~ 290 (364)
|+.+||+..... +..+...+++++++|+|++++.+++++.. |++||+++++ .+++|+.+.
T Consensus 150 p~~v~g~~~~~~--------------~~~~~~~~~~i~~~Dva~~i~~~l~~~~~~g~~~~i~~g~-~~~~e~~~~ 210 (219)
T 3dqp_A 150 PGALTEEEATGL--------------IDINDEVSASNTIGDVADTIKELVMTDHSIGKVISMHNGK-TAIKEALES 210 (219)
T ss_dssp ECSEECSCCCSE--------------EEESSSCCCCEEHHHHHHHHHHHHTCGGGTTEEEEEEECS-EEHHHHHHT
T ss_pred CceEecCCCCCc--------------cccCCCcCCcccHHHHHHHHHHHHhCccccCcEEEeCCCC-ccHHHHHHH
Confidence 999999753210 01125678899999999999999998754 8899998875 999987643
|
| >3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.6e-29 Score=215.39 Aligned_cols=215 Identities=15% Similarity=0.106 Sum_probs=145.9
Q ss_pred CeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCChhhHHhhccCceeeEEEEecCCCCCCC
Q 017914 60 NRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETALMILTTLKNYTHLLVSIPPLEGTG 138 (364)
Q Consensus 60 ~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~~~~~~~d~v~~~~~~~~~~~~~~ 138 (364)
|+||||| ||+||++|+++|+++|++|++++|++++...+. .+++++.+|++|.+...+.++|+|+|+++.... ..
T Consensus 1 MkvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~-~~~~~~~~D~~d~~~~~~~~~d~vi~~ag~~~~---~~ 76 (221)
T 3ew7_A 1 MKIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKITQTH-KDINILQKDIFDLTLSDLSDQNVVVDAYGISPD---EA 76 (221)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCSHHHHHHC-SSSEEEECCGGGCCHHHHTTCSEEEECCCSSTT---TT
T ss_pred CeEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCchhhhhcc-CCCeEEeccccChhhhhhcCCCEEEECCcCCcc---cc
Confidence 6899999 999999999999999999999999988776665 789999999999766778899999999976322 23
Q ss_pred ChhhhHHHHHHHHhhcCCccEEEEEccceee-cCCCCccccCCCCCCCCChhHHHHHHHHHHHHHhhh-hcCCcEEEEEe
Q 017914 139 DPMLKHGELLRSTLMNGHLQWLGYLSSTGVY-GHSGGAWVDEDYPANPTTELGRLRLSAEKGWLNLGR-DLGISAQVFRL 216 (364)
Q Consensus 139 ~~~~~~~~~l~~a~~~~~~~r~v~~Ss~~vy-~~~~~~~~~E~~~~~~~~~Y~~sK~~~E~~~~~~~~-~~~~~~~ilRp 216 (364)
........++++++++.+++++|++||.++| +.....+..|+.+..|.+.|+.+|...|.+. .+.+ ..+++++++||
T Consensus 77 ~~~~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~~~k~~~e~~~-~~~~~~~gi~~~ivrp 155 (221)
T 3ew7_A 77 EKHVTSLDHLISVLNGTVSPRLLVVGGAASLQIDEDGNTLLESKGLREAPYYPTARAQAKQLE-HLKSHQAEFSWTYISP 155 (221)
T ss_dssp TSHHHHHHHHHHHHCSCCSSEEEEECCCC-------------------CCCSCCHHHHHHHHH-HHHTTTTTSCEEEEEC
T ss_pred chHHHHHHHHHHHHHhcCCceEEEEecceEEEcCCCCccccccCCCCCHHHHHHHHHHHHHHH-HHHhhccCccEEEEeC
Confidence 3355667899999998889999999997654 4444445677777778889999999999873 3333 67999999999
Q ss_pred cceecCCCChHHHHHHh-cCcccccccccCCcccccccHHHHHHHHHHHccCCCC-CceEEEeCCCCCCHHH
Q 017914 217 GGIYGPGRSSVDTIIKQ-LPLSEGQKMRRARQYTSRIHVDDICQVLSASIDKPSA-WNVYNVVDDDPAPREE 286 (364)
Q Consensus 217 ~~v~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~~-g~~~~i~~~~~~s~~e 286 (364)
+.+||++... ..+... ..+. ..+.+ .++++++|+|++++.+++++.. |+.||++++.+.+.+|
T Consensus 156 ~~v~g~~~~~-~~~~~~~~~~~---~~~~~---~~~i~~~Dva~~~~~~l~~~~~~g~~~~~~~~~~~~~~~ 220 (221)
T 3ew7_A 156 SAMFEPGERT-GDYQIGKDHLL---FGSDG---NSFISMEDYAIAVLDEIERPNHLNEHFTVAGKLEHHHHH 220 (221)
T ss_dssp SSCCCCC----------------------------CCCHHHHHHHHHHHHHSCSCTTSEEECCC--------
T ss_pred cceecCCCcc-CceEeccccce---ecCCC---CceEeHHHHHHHHHHHHhCccccCCEEEECCCCcccccc
Confidence 9999984321 111111 1111 11112 3579999999999999998854 8999999998877765
|
| >3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=99.97 E-value=2e-30 Score=230.34 Aligned_cols=264 Identities=13% Similarity=0.037 Sum_probs=186.5
Q ss_pred CeEEEEc-CChhhHHHHHHHHhC-CCEEEEEEeCchhhhhhhhCCceEEEccCChhhH--HhhccCceeeEEEEecCCCC
Q 017914 60 NRMLILG-MGFVGRIFAEKIKNQ-GWVVSGTCTNVMKKKELEQSGFDVHLFNANETAL--MILTTLKNYTHLLVSIPPLE 135 (364)
Q Consensus 60 ~~vlVtG-tG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~--~~~~~~d~v~~~~~~~~~~~ 135 (364)
|+||||| ||+||++++++|.++ |++|++++|++++...+...+++++.+|++|++. .+++++|.|+|+++....
T Consensus 1 M~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~~~~~~~~v~~~~~D~~d~~~l~~~~~~~d~vi~~a~~~~~-- 78 (289)
T 3e48_A 1 MNIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPDDWRGKVSVRQLDYFNQESMVEAFKGMDTVVFIPSIIHP-- 78 (289)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHTTCTTEEEEESSGGGSCGGGBTTBEEEECCTTCHHHHHHHTTTCSEEEECCCCCCS--
T ss_pred CEEEEEcCCchHHHHHHHHHhhCCCCcEEEEECCHHHHHHhhhCCCEEEEcCCCCHHHHHHHHhCCCEEEEeCCCCcc--
Confidence 6899999 999999999999998 9999999999888777767899999999999774 778999999999864321
Q ss_pred CCCChhhhHHHHHHHHhhcCCccEEEEEccceeecCCCCccccCCCCCCCCChhHHHHHHHHHHHHHhhhhcCCcEEEEE
Q 017914 136 GTGDPMLKHGELLRSTLMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANPTTELGRLRLSAEKGWLNLGRDLGISAQVFR 215 (364)
Q Consensus 136 ~~~~~~~~~~~~l~~a~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR 215 (364)
.........++++++++.+++||||+||.+. .. ..+. .+...+...|..+. +.+++++++|
T Consensus 79 --~~~~~~~~~~l~~aa~~~gv~~iv~~Ss~~~---~~------~~~~----~~~~~~~~~e~~~~----~~g~~~~ilr 139 (289)
T 3e48_A 79 --SFKRIPEVENLVYAAKQSGVAHIIFIGYYAD---QH------NNPF----HMSPYFGYASRLLS----TSGIDYTYVR 139 (289)
T ss_dssp --HHHHHHHHHHHHHHHHHTTCCEEEEEEESCC---ST------TCCS----TTHHHHHHHHHHHH----HHCCEEEEEE
T ss_pred --chhhHHHHHHHHHHHHHcCCCEEEEEcccCC---CC------CCCC----ccchhHHHHHHHHH----HcCCCEEEEe
Confidence 1223456689999999999999999998432 11 1111 12223334555443 5689999999
Q ss_pred ecceecCCCChHHHHHHhcCcccccccccCCcccccccHHHHHHHHHHHccCCCC-CceEEEeCCCCCCHHHHHHHHHHH
Q 017914 216 LGGIYGPGRSSVDTIIKQLPLSEGQKMRRARQYTSRIHVDDICQVLSASIDKPSA-WNVYNVVDDDPAPREEVFAYAWDL 294 (364)
Q Consensus 216 p~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~~-g~~~~i~~~~~~s~~el~~~i~~~ 294 (364)
|+.++|+....+..+..... .....+++.++|++++|+|++++.++.++.. |++||++ ++.+|+.|+++.+.+.
T Consensus 140 p~~~~~~~~~~~~~~~~~~~----~~~~~g~~~~~~i~~~Dva~~~~~~l~~~~~~g~~~~~~-~~~~s~~e~~~~~~~~ 214 (289)
T 3e48_A 140 MAMYMDPLKPYLPELMNMHK----LIYPAGDGRINYITRNDIARGVIAIIKNPDTWGKRYLLS-GYSYDMKELAAILSEA 214 (289)
T ss_dssp ECEESTTHHHHHHHHHHHTE----ECCCCTTCEEEEECHHHHHHHHHHHHHCGGGTTCEEEEC-CEEEEHHHHHHHHHHH
T ss_pred ccccccccHHHHHHHHHCCC----EecCCCCceeeeEEHHHHHHHHHHHHcCCCcCCceEEeC-CCcCCHHHHHHHHHHH
Confidence 99999975433333333221 1223467789999999999999999998754 8899999 9999999999999999
Q ss_pred hcCCCCCcccCCCC------CCCCCCCc-c----CCCCCCCeEEEchhHHHhcCcccCCCCHHHHHHHH
Q 017914 295 VEKKWPGLLKHRKP------RENTESSN-E----KGSSRGEKRVSNVRMKKELGVRLWHPSYKSGLQSI 352 (364)
Q Consensus 295 ~g~~~~~~~~~~~~------~~~~~~~~-~----~~~~~~~~~~d~~k~~~~lG~~p~~~~~~e~l~~~ 352 (364)
+|++++. ...+.. ......+. . ..........+...+++.+|++|+ +|+|.+++.
T Consensus 215 ~g~~~~~-~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~G~~p~--~~~~~~~~~ 280 (289)
T 3e48_A 215 SGTEIKY-EPVSLETFAEMYDEPKGFGALLASMYHAGARGLLDQESNDFKQLVNDQPQ--TLQSFLQEN 280 (289)
T ss_dssp HTSCCEE-CCCCHHHHHHHTCCSTTHHHHHHHHHHHHHTTTTCCCCSHHHHHHSSCCC--CHHHHHHC-
T ss_pred HCCceeE-EeCCHHHHHHHhcCCccHHHHHHHHHHHHHCCCccccCchHHHHhCCCCC--CHHHHHHHH
Confidence 9987321 111000 00000000 0 000122233456677888999998 788776653
|
| >3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A | Back alignment and structure |
|---|
Probab=99.96 E-value=2.6e-29 Score=230.90 Aligned_cols=205 Identities=15% Similarity=0.139 Sum_probs=167.2
Q ss_pred CeEEEEc-CChhhHHHHHHHHhCCC-EEEEEEeCchhhhhhhhCCceEEEccCChhh-H-HhhccCceeeEEEEecCCCC
Q 017914 60 NRMLILG-MGFVGRIFAEKIKNQGW-VVSGTCTNVMKKKELEQSGFDVHLFNANETA-L-MILTTLKNYTHLLVSIPPLE 135 (364)
Q Consensus 60 ~~vlVtG-tG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~-~-~~~~~~d~v~~~~~~~~~~~ 135 (364)
|+||||| |||||++|+++|+++|+ +|++++|+ .|++ + .+++++|.|+|+++......
T Consensus 1 M~VlVtGatG~iG~~l~~~L~~~g~~~v~~~d~~-------------------~d~~~l~~~~~~~d~Vih~a~~~~~~~ 61 (369)
T 3st7_A 1 MNIVITGAKGFVGKNLKADLTSTTDHHIFEVHRQ-------------------TKEEELESALLKADFIVHLAGVNRPEH 61 (369)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHCCCEEEECCTT-------------------CCHHHHHHHHHHCSEEEECCCSBCTTC
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCEEEEECCC-------------------CCHHHHHHHhccCCEEEECCcCCCCCC
Confidence 6899999 99999999999999999 88888774 2333 2 56678999999998655421
Q ss_pred --CCCChhhhHHHHHHHHhhcCCcc-EEEEEccceeecCCCCccccCCCCCCCCChhHHHHHHHHHHHHHhhhhcCCcEE
Q 017914 136 --GTGDPMLKHGELLRSTLMNGHLQ-WLGYLSSTGVYGHSGGAWVDEDYPANPTTELGRLRLSAEKGWLNLGRDLGISAQ 212 (364)
Q Consensus 136 --~~~~~~~~~~~~l~~a~~~~~~~-r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ 212 (364)
...........++++++++.+++ +|||+||..+|+ .+.|+.+|.++|+++++++++.+++++
T Consensus 62 ~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~Ss~~~~~---------------~~~Y~~sK~~~E~~~~~~~~~~g~~~~ 126 (369)
T 3st7_A 62 DKEFSLGNVSYLDHVLDILTRNTKKPAILLSSSIQATQ---------------DNPYGESKLQGEQLLREYAEEYGNTVY 126 (369)
T ss_dssp STTCSSSCCBHHHHHHHHHTTCSSCCEEEEEEEGGGGS---------------CSHHHHHHHHHHHHHHHHHHHHCCCEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeCchhhcC---------------CCCchHHHHHHHHHHHHHHHHhCCCEE
Confidence 22334456678999999998887 999999999885 468999999999999999988899999
Q ss_pred EEEecceecCCCC-----hHHHHHHhcCcccccccccCCcccccccHHHHHHHHHHHccCCCC--CceEEEeCCCCCCHH
Q 017914 213 VFRLGGIYGPGRS-----SVDTIIKQLPLSEGQKMRRARQYTSRIHVDDICQVLSASIDKPSA--WNVYNVVDDDPAPRE 285 (364)
Q Consensus 213 ilRp~~v~g~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~~--g~~~~i~~~~~~s~~ 285 (364)
++||+++||++.. ++..++....-.....+.++++.++|+|++|+|++++.+++++.. +++||+++++.+|+.
T Consensus 127 i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~~~~~~~~~i~~~~~~s~~ 206 (369)
T 3st7_A 127 IYRWPNLFGKWCKPNYNSVIATFCYKIARNEEIQVNDRNVELTLNYVDDIVAEIKRAIEGTPTIENGVPTVPNVFKVTLG 206 (369)
T ss_dssp EEEECEEECTTCCTTSSCHHHHHHHHHHTTCCCCCSCTTCEEEEEEHHHHHHHHHHHHHTCCCEETTEECCSCCEEEEHH
T ss_pred EEECCceeCCCCCCCcchHHHHHHHHHHcCCCeEecCCCeEEEEEEHHHHHHHHHHHHhCCcccCCceEEeCCCCceeHH
Confidence 9999999998743 444444432112222334678889999999999999999999876 899999999999999
Q ss_pred HHHHHHHHHhcCC
Q 017914 286 EVFAYAWDLVEKK 298 (364)
Q Consensus 286 el~~~i~~~~g~~ 298 (364)
|+++.+.+.+|.+
T Consensus 207 e~~~~~~~~~g~~ 219 (369)
T 3st7_A 207 EIVDLLYKFKQSR 219 (369)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCC
Confidence 9999999999876
|
| >3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans} | Back alignment and structure |
|---|
Probab=99.96 E-value=4.3e-29 Score=215.06 Aligned_cols=211 Identities=16% Similarity=0.173 Sum_probs=162.4
Q ss_pred CCCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCc-eEEEccCChhhH-HhhccCceeeEEEEecC
Q 017914 56 WQSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGF-DVHLFNANETAL-MILTTLKNYTHLLVSIP 132 (364)
Q Consensus 56 ~~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~-~~~~~D~~~~~~-~~~~~~d~v~~~~~~~~ 132 (364)
..++|+||||| ||+||++++++|+++|++|++++|++++...+...++ +++.+|++ ..+ ..+.++|+|+|+++...
T Consensus 18 ~l~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~Dl~-~~~~~~~~~~D~vi~~ag~~~ 96 (236)
T 3e8x_A 18 YFQGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGPELRERGASDIVVANLE-EDFSHAFASIDAVVFAAGSGP 96 (236)
T ss_dssp ---CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHTTCSEEEECCTT-SCCGGGGTTCSEEEECCCCCT
T ss_pred CcCCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECChHHHHHHHhCCCceEEEcccH-HHHHHHHcCCCEEEECCCCCC
Confidence 45678999999 9999999999999999999999999888877777789 99999999 333 67789999999997543
Q ss_pred CCCCCC---ChhhhHHHHHHHHhhcCCccEEEEEccceeecCCCCccccCCCCCCCCChhHHHHHHHHHHHHHhhhhcCC
Q 017914 133 PLEGTG---DPMLKHGELLRSTLMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANPTTELGRLRLSAEKGWLNLGRDLGI 209 (364)
Q Consensus 133 ~~~~~~---~~~~~~~~~l~~a~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~ 209 (364)
.. .+. +.......++++++++.++++|||+||.+.+.. +..+ .+...|+.+|.++|.+++ ..++
T Consensus 97 ~~-~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~~~~-------~~~~-~~~~~Y~~sK~~~e~~~~----~~gi 163 (236)
T 3e8x_A 97 HT-GADKTILIDLWGAIKTIQEAEKRGIKRFIMVSSVGTVDP-------DQGP-MNMRHYLVAKRLADDELK----RSSL 163 (236)
T ss_dssp TS-CHHHHHHTTTHHHHHHHHHHHHHTCCEEEEECCTTCSCG-------GGSC-GGGHHHHHHHHHHHHHHH----HSSS
T ss_pred CC-CccccchhhHHHHHHHHHHHHHcCCCEEEEEecCCCCCC-------CCCh-hhhhhHHHHHHHHHHHHH----HCCC
Confidence 21 111 112344578888888888999999999554321 1112 456789999999999886 5689
Q ss_pred cEEEEEecceecCCCChHHHHHHhcCcccccccccCCcccccccHHHHHHHHHHHccCC-CCCceEEEeCCCCCCHHHHH
Q 017914 210 SAQVFRLGGIYGPGRSSVDTIIKQLPLSEGQKMRRARQYTSRIHVDDICQVLSASIDKP-SAWNVYNVVDDDPAPREEVF 288 (364)
Q Consensus 210 ~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~-~~g~~~~i~~~~~~s~~el~ 288 (364)
+++++||+.++|+..... + .....+...+++++++|+|++++.+++++ ..|++|+++++ .++++|++
T Consensus 164 ~~~~lrpg~v~~~~~~~~--------~---~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~g~~~~v~~~-~~~~~e~~ 231 (236)
T 3e8x_A 164 DYTIVRPGPLSNEESTGK--------V---TVSPHFSEITRSITRHDVAKVIAELVDQQHTIGKTFEVLNG-DTPIAKVV 231 (236)
T ss_dssp EEEEEEECSEECSCCCSE--------E---EEESSCSCCCCCEEHHHHHHHHHHHTTCGGGTTEEEEEEEC-SEEHHHHH
T ss_pred CEEEEeCCcccCCCCCCe--------E---EeccCCCcccCcEeHHHHHHHHHHHhcCccccCCeEEEeCC-CcCHHHHH
Confidence 999999999999863210 0 01123344688999999999999999987 45899999988 59999998
Q ss_pred HHHH
Q 017914 289 AYAW 292 (364)
Q Consensus 289 ~~i~ 292 (364)
+.+.
T Consensus 232 ~~i~ 235 (236)
T 3e8x_A 232 EQLG 235 (236)
T ss_dssp HTC-
T ss_pred HHhc
Confidence 8764
|
| >2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A | Back alignment and structure |
|---|
Probab=99.96 E-value=5.4e-29 Score=222.18 Aligned_cols=221 Identities=17% Similarity=0.162 Sum_probs=168.6
Q ss_pred CCeEEEEc-CChhhHHHHHHHHhCC-CEEEEEEeCchhh--hhhhhCCceEEEccCChhhH--HhhccCceeeEEEEecC
Q 017914 59 PNRMLILG-MGFVGRIFAEKIKNQG-WVVSGTCTNVMKK--KELEQSGFDVHLFNANETAL--MILTTLKNYTHLLVSIP 132 (364)
Q Consensus 59 ~~~vlVtG-tG~iG~~l~~~L~~~g-~~V~~~~r~~~~~--~~l~~~~~~~~~~D~~~~~~--~~~~~~d~v~~~~~~~~ 132 (364)
+|+||||| ||+||++++++|+++| ++|++++|++.+. ..+...+++++.+|++|++. .+++++|.|+|+++...
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~~~~~~~l~~~~~~~~~~D~~d~~~l~~~~~~~d~vi~~a~~~~ 84 (299)
T 2wm3_A 5 KKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAAKELRLQGAEVVQGDQDDQVIMELALNGAYATFIVTNYWE 84 (299)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTTSHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEEECCCHHH
T ss_pred CCEEEEECCCchHHHHHHHHHHhcCCceEEEEEcCCCCHHHHHHHHCCCEEEEecCCCHHHHHHHHhcCCEEEEeCCCCc
Confidence 57999999 9999999999999998 9999999987653 33445789999999999774 67889999999986422
Q ss_pred CCCCCCChhhhHHHHHHHHhhcCCccEEEEEccceeecCCCCccccCCCCCCCCChhHHHHHHHHHHHHHhhhhcCCcEE
Q 017914 133 PLEGTGDPMLKHGELLRSTLMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANPTTELGRLRLSAEKGWLNLGRDLGISAQ 212 (364)
Q Consensus 133 ~~~~~~~~~~~~~~~l~~a~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ 212 (364)
.. ..+.......++++++++.++++|||+|+.++|+...+ .+...|+.+|..+|+++++ .|++++
T Consensus 85 ~~--~~~~~~~~~~~~~~aa~~~gv~~iv~~S~~~~~~~~~~---------~~~~~y~~sK~~~e~~~~~----~gi~~~ 149 (299)
T 2wm3_A 85 SC--SQEQEVKQGKLLADLARRLGLHYVVYSGLENIKKLTAG---------RLAAAHFDGKGEVEEYFRD----IGVPMT 149 (299)
T ss_dssp HT--CHHHHHHHHHHHHHHHHHHTCSEEEECCCCCHHHHTTT---------SCCCHHHHHHHHHHHHHHH----HTCCEE
T ss_pred cc--cchHHHHHHHHHHHHHHHcCCCEEEEEcCccccccCCC---------cccCchhhHHHHHHHHHHH----CCCCEE
Confidence 11 01122345678889998889999999888877753221 1346899999999999874 589999
Q ss_pred EEEecceecCCCChHHHHHHhcCcccc----cccccCCcccccccHHHHHHHHHHHccCCC--CCceEEEeCCCCCCHHH
Q 017914 213 VFRLGGIYGPGRSSVDTIIKQLPLSEG----QKMRRARQYTSRIHVDDICQVLSASIDKPS--AWNVYNVVDDDPAPREE 286 (364)
Q Consensus 213 ilRp~~v~g~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~--~g~~~~i~~~~~~s~~e 286 (364)
++||+.+||+.... +... ....+ .....++..++|+|++|+|++++.++.++. .|++|++++ +.+|+.|
T Consensus 150 ilrp~~~~~~~~~~---~~~~-~~~~g~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~~~g~~~~~~g-~~~s~~e 224 (299)
T 2wm3_A 150 SVRLPCYFENLLSH---FLPQ-KAPDGKSYLLSLPTGDVPMDGMSVSDLGPVVLSLLKMPEKYVGQNIGLST-CRHTAEE 224 (299)
T ss_dssp EEECCEEGGGGGTT---TCCE-ECTTSSSEEECCCCTTSCEEEECGGGHHHHHHHHHHSHHHHTTCEEECCS-EEECHHH
T ss_pred EEeecHHhhhchhh---cCCc-ccCCCCEEEEEecCCCCccceecHHHHHHHHHHHHcChhhhCCeEEEeee-ccCCHHH
Confidence 99999999964221 1110 00111 112235677899999999999999998752 578999986 6799999
Q ss_pred HHHHHHHHhcCCC
Q 017914 287 VFAYAWDLVEKKW 299 (364)
Q Consensus 287 l~~~i~~~~g~~~ 299 (364)
+++.+.+.+|+++
T Consensus 225 ~~~~~~~~~g~~~ 237 (299)
T 2wm3_A 225 YAALLTKHTRKVV 237 (299)
T ss_dssp HHHHHHHHHSSCE
T ss_pred HHHHHHHHHCCCc
Confidence 9999999999873
|
| >3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=1.5e-28 Score=215.58 Aligned_cols=215 Identities=14% Similarity=0.087 Sum_probs=174.1
Q ss_pred CCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCChhhH--HhhccCceeeEEEEecCCCC
Q 017914 59 PNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETAL--MILTTLKNYTHLLVSIPPLE 135 (364)
Q Consensus 59 ~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~--~~~~~~d~v~~~~~~~~~~~ 135 (364)
+|+||||| +|+||++++++|+++|++|++++|+..+.. ..++.++.+|++|.+. ..++++|+|+|+++.... .
T Consensus 3 ~k~vlVTGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~---~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~Ag~~~~-~ 78 (267)
T 3rft_A 3 MKRLLVTGAAGQLGRVMRERLAPMAEILRLADLSPLDPA---GPNEECVQCDLADANAVNAMVAGCDGIVHLGGISVE-K 78 (267)
T ss_dssp EEEEEEESTTSHHHHHHHHHTGGGEEEEEEEESSCCCCC---CTTEEEEECCTTCHHHHHHHHTTCSEEEECCSCCSC-C
T ss_pred CCEEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCcccc---CCCCEEEEcCCCCHHHHHHHHcCCCEEEECCCCcCc-C
Confidence 57899999 999999999999999999999999876543 3578999999999774 677899999999976321 1
Q ss_pred CCC---ChhhhHHHHHHHHhhcCCccEEEEEccceeecC-CCCccccCCCCCCCCChhHHHHHHHHHHHHHhhhhcCCcE
Q 017914 136 GTG---DPMLKHGELLRSTLMNGHLQWLGYLSSTGVYGH-SGGAWVDEDYPANPTTELGRLRLSAEKGWLNLGRDLGISA 211 (364)
Q Consensus 136 ~~~---~~~~~~~~~l~~a~~~~~~~r~v~~Ss~~vy~~-~~~~~~~E~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~ 211 (364)
.+. +.+.....++.+++++.+++||||+||..+|+. ....+++|+.+..+.+.|+.+|...|.+++.++++.++++
T Consensus 79 ~~~~~~~~N~~g~~~l~~a~~~~~~~~iv~~SS~~~~g~~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~~~~~a~~~g~~~ 158 (267)
T 3rft_A 79 PFEQILQGNIIGLYNLYEAARAHGQPRIVFASSNHTIGYYPQTERLGPDVPARPDGLYGVSKCFGENLARMYFDKFGQET 158 (267)
T ss_dssp CHHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEEGGGGTTSBTTSCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHHCCCE
T ss_pred CHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcchHHhCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHhCCeE
Confidence 111 122344567888888888999999999999974 3455789999999999999999999999999988889999
Q ss_pred EEEEecceecCCCChHHHHHHhcCcccccccccCCcccccccHHHHHHHHHHHccCCCCC-ceEEEeCCCCCCHHHHHHH
Q 017914 212 QVFRLGGIYGPGRSSVDTIIKQLPLSEGQKMRRARQYTSRIHVDDICQVLSASIDKPSAW-NVYNVVDDDPAPREEVFAY 290 (364)
Q Consensus 212 ~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~~g-~~~~i~~~~~~s~~el~~~ 290 (364)
++|||+.++++. ..+...++|++++|+++++..+++.+..+ .++++++++..++.++...
T Consensus 159 ~~vr~~~v~~~~-------------------~~~~~~~~~~~~~d~a~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~ 219 (267)
T 3rft_A 159 ALVRIGSCTPEP-------------------NNYRMLSTWFSHDDFVSLIEAVFRAPVLGCPVVWGASANDAGWWDNSHL 219 (267)
T ss_dssp EEEEECBCSSSC-------------------CSTTHHHHBCCHHHHHHHHHHHHHCSCCCSCEEEECCCCTTCCBCCGGG
T ss_pred EEEEeecccCCC-------------------CCCCceeeEEcHHHHHHHHHHHHhCCCCCceEEEEeCCCCCCcccChhH
Confidence 999999999762 22345678899999999999999988664 5888888888888776433
Q ss_pred HHHHhcCC
Q 017914 291 AWDLVEKK 298 (364)
Q Consensus 291 i~~~~g~~ 298 (364)
+.+|.+
T Consensus 220 --~~~g~~ 225 (267)
T 3rft_A 220 --GFLGWK 225 (267)
T ss_dssp --GGGCCC
T ss_pred --HHCCCC
Confidence 556664
|
| >1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=5.5e-27 Score=203.81 Aligned_cols=221 Identities=13% Similarity=0.167 Sum_probs=163.4
Q ss_pred CCCeEEEEc-CChhhHHHHHHHHhC--CCEEEEEEeCchhhhhhhhCCceEEEccCChhhH--HhhccCceeeEEEEecC
Q 017914 58 SPNRMLILG-MGFVGRIFAEKIKNQ--GWVVSGTCTNVMKKKELEQSGFDVHLFNANETAL--MILTTLKNYTHLLVSIP 132 (364)
Q Consensus 58 ~~~~vlVtG-tG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~--~~~~~~d~v~~~~~~~~ 132 (364)
++|+||||| +|+||++++++|+++ |++|++++|++.+...+ ..++.++.+|++|.+. ..++++|.|+|+++...
T Consensus 3 ~~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~a~~~~ 81 (253)
T 1xq6_A 3 NLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKI-GGEADVFIGDITDADSINPAFQGIDALVILTSAVP 81 (253)
T ss_dssp SCCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEESCHHHHHHT-TCCTTEEECCTTSHHHHHHHHTTCSEEEECCCCCC
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEcCCCchhhc-CCCeeEEEecCCCHHHHHHHHcCCCEEEEeccccc
Confidence 468999999 999999999999999 89999999987765544 3578899999999764 67789999999997543
Q ss_pred CCC----------C---CC------ChhhhHHHHHHHHhhcCCccEEEEEccceeecCCCCccccCCCCCCC--CChhHH
Q 017914 133 PLE----------G---TG------DPMLKHGELLRSTLMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANP--TTELGR 191 (364)
Q Consensus 133 ~~~----------~---~~------~~~~~~~~~l~~a~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~--~~~Y~~ 191 (364)
... . +. +.......++++++++.++++|||+||.+++... .+..+ .+.|+.
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~~~~--------~~~~~~~~~~y~~ 153 (253)
T 1xq6_A 82 KMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAGVKHIVVVGSMGGTNPD--------HPLNKLGNGNILV 153 (253)
T ss_dssp EECTTCCTTSSCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHTCSEEEEEEETTTTCTT--------CGGGGGGGCCHHH
T ss_pred cccccccccccccchhhccccccceeeeHHHHHHHHHHHHHcCCCEEEEEcCccCCCCC--------CccccccchhHHH
Confidence 210 0 00 1223445788888888889999999998764211 11111 135778
Q ss_pred HHHHHHHHHHHhhhhcCCcEEEEEecceecCCCChHHHHHHhcCcccccccccCCcccccccHHHHHHHHHHHccCCC-C
Q 017914 192 LRLSAEKGWLNLGRDLGISAQVFRLGGIYGPGRSSVDTIIKQLPLSEGQKMRRARQYTSRIHVDDICQVLSASIDKPS-A 270 (364)
Q Consensus 192 sK~~~E~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~-~ 270 (364)
+|..+|.++++ .+++++++||+.+||+...... +.... .....+ ...++++++|+|++++.+++++. .
T Consensus 154 sK~~~e~~~~~----~~i~~~~vrpg~v~~~~~~~~~-~~~~~---~~~~~~---~~~~~~~~~Dva~~~~~~~~~~~~~ 222 (253)
T 1xq6_A 154 WKRKAEQYLAD----SGTPYTIIRAGGLLDKEGGVRE-LLVGK---DDELLQ---TDTKTVPRADVAEVCIQALLFEEAK 222 (253)
T ss_dssp HHHHHHHHHHT----SSSCEEEEEECEEECSCSSSSC-EEEES---TTGGGG---SSCCEEEHHHHHHHHHHHTTCGGGT
T ss_pred HHHHHHHHHHh----CCCceEEEecceeecCCcchhh-hhccC---CcCCcC---CCCcEEcHHHHHHHHHHHHcCcccc
Confidence 99999998863 6899999999999998753210 00000 001111 13568999999999999998864 4
Q ss_pred CceEEEeCCC---CCCHHHHHHHHHHHhcCC
Q 017914 271 WNVYNVVDDD---PAPREEVFAYAWDLVEKK 298 (364)
Q Consensus 271 g~~~~i~~~~---~~s~~el~~~i~~~~g~~ 298 (364)
|++||+++++ .+|+.|+++.+.+.+|++
T Consensus 223 g~~~~i~~~~~~~~~s~~e~~~~~~~~~g~~ 253 (253)
T 1xq6_A 223 NKAFDLGSKPEGTSTPTKDFKALFSQVTSRF 253 (253)
T ss_dssp TEEEEEEECCTTTSCCCCCHHHHHHTCCCCC
T ss_pred CCEEEecCCCcCCCCCHHHHHHHHHHHhCCC
Confidence 7899999974 599999999999998863
|
| >1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=8.2e-26 Score=190.22 Aligned_cols=197 Identities=9% Similarity=-0.014 Sum_probs=150.4
Q ss_pred CeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCChhhH--HhhccCceeeEEEEecCCCCC
Q 017914 60 NRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETAL--MILTTLKNYTHLLVSIPPLEG 136 (364)
Q Consensus 60 ~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~--~~~~~~d~v~~~~~~~~~~~~ 136 (364)
|+||||| +|+||++++++|+++|++|++++|++.+...+...+++++.+|++|.+. ..++++|+|+|+++.... ..
T Consensus 4 ~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~~~~~-~~ 82 (206)
T 1hdo_A 4 KKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEGPRPAHVVVGDVLQAADVDKTVAGQDAVIVLLGTRND-LS 82 (206)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSSSCCCSEEEESCTTSHHHHHHHHTTCSEEEECCCCTTC-CS
T ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChhhcccccCCceEEEEecCCCHHHHHHHHcCCCEEEECccCCCC-CC
Confidence 7999999 9999999999999999999999998776554434678999999999764 677899999999976443 12
Q ss_pred CCChhhhHHHHHHHHhhcCCccEEEEEccceeecCCCCccccCCCCCCCCChhHHHHHHHHHHHHHhhhhcCCcEEEEEe
Q 017914 137 TGDPMLKHGELLRSTLMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANPTTELGRLRLSAEKGWLNLGRDLGISAQVFRL 216 (364)
Q Consensus 137 ~~~~~~~~~~~l~~a~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilRp 216 (364)
..+.......++++++++.++++|||+||.++|+.....+. +...|+.+|..+|++++ ..+++++++||
T Consensus 83 ~~~~n~~~~~~~~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~-------~~~~y~~~K~~~e~~~~----~~~i~~~~lrp 151 (206)
T 1hdo_A 83 PTTVMSEGARNIVAAMKAHGVDKVVACTSAFLLWDPTKVPP-------RLQAVTDDHIRMHKVLR----ESGLKYVAVMP 151 (206)
T ss_dssp CCCHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCTTCSCG-------GGHHHHHHHHHHHHHHH----HTCSEEEEECC
T ss_pred ccchHHHHHHHHHHHHHHhCCCeEEEEeeeeeccCcccccc-------cchhHHHHHHHHHHHHH----hCCCCEEEEeC
Confidence 23344556778888888888999999999998875433211 45789999999999885 46899999999
Q ss_pred cceecCC-CChHHHHHHhcCcccccccccCCcccccccHHHHHHHHHHHccCCC-CCceEEEeCCC
Q 017914 217 GGIYGPG-RSSVDTIIKQLPLSEGQKMRRARQYTSRIHVDDICQVLSASIDKPS-AWNVYNVVDDD 280 (364)
Q Consensus 217 ~~v~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~-~g~~~~i~~~~ 280 (364)
+.++... ...+. .... +.+. .++++++|+|++++.+++++. .|++|++++|+
T Consensus 152 ~~~~~~~~~~~~~-------~~~~---~~~~--~~~i~~~Dva~~~~~~~~~~~~~g~~~~i~~g~ 205 (206)
T 1hdo_A 152 PHIGDQPLTGAYT-------VTLD---GRGP--SRVISKHDLGHFMLRCLTTDEYDGHSTYPSHQY 205 (206)
T ss_dssp SEEECCCCCSCCE-------EESS---SCSS--CSEEEHHHHHHHHHHTTSCSTTTTCEEEEECCC
T ss_pred CcccCCCCCcceE-------eccc---CCCC--CCccCHHHHHHHHHHHhcCccccccceeeeccc
Confidence 9973221 11100 0000 0110 478999999999999999875 48999999874
|
| >1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.94 E-value=1.4e-26 Score=207.90 Aligned_cols=224 Identities=13% Similarity=0.080 Sum_probs=164.4
Q ss_pred CCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCch-----hhhh---hhhCCceEEEccCChhhH--HhhccCceeeEE
Q 017914 59 PNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVM-----KKKE---LEQSGFDVHLFNANETAL--MILTTLKNYTHL 127 (364)
Q Consensus 59 ~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~-----~~~~---l~~~~~~~~~~D~~~~~~--~~~~~~d~v~~~ 127 (364)
+|+||||| ||+||++++++|+++|++|++++|+.. +... +...+++++.+|++|++. .+++++|.|+|+
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~d~vi~~ 83 (313)
T 1qyd_A 4 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQRLVDALKQVDVVISA 83 (313)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCHHHHHHHHTTCSEEEEC
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhCCCcEEEEECCCcccchhHHHHHHHHHhCCeEEEeCCCCCHHHHHHHHhCCCEEEEC
Confidence 57899999 999999999999999999999999842 2222 234689999999999774 778899999999
Q ss_pred EEecCCCCCCCChhhhHHHHHHHHhhcCC-ccEEEEEccceeecCCCCccccCCCCCCC-CChhHHHHHHHHHHHHHhhh
Q 017914 128 LVSIPPLEGTGDPMLKHGELLRSTLMNGH-LQWLGYLSSTGVYGHSGGAWVDEDYPANP-TTELGRLRLSAEKGWLNLGR 205 (364)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~~l~~a~~~~~-~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~-~~~Y~~sK~~~E~~~~~~~~ 205 (364)
++.... ........++++++++.| ++|||+ | +||.....+ ..+..| ...| .+|..+|++++
T Consensus 84 a~~~~~-----~~~~~~~~~l~~aa~~~g~v~~~v~-S---~~g~~~~~~---~~~~~p~~~~y-~sK~~~e~~~~---- 146 (313)
T 1qyd_A 84 LAGGVL-----SHHILEQLKLVEAIKEAGNIKRFLP-S---EFGMDPDIM---EHALQPGSITF-IDKRKVRRAIE---- 146 (313)
T ss_dssp CCCSSS-----STTTTTHHHHHHHHHHSCCCSEEEC-S---CCSSCTTSC---CCCCSSTTHHH-HHHHHHHHHHH----
T ss_pred Cccccc-----hhhHHHHHHHHHHHHhcCCCceEEe-c---CCcCCcccc---ccCCCCCcchH-HHHHHHHHHHH----
Confidence 875432 123445688999999888 999996 4 455322211 223334 4568 99999999886
Q ss_pred hcCCcEEEEEecceecCCCChHHHHH--HhcCcccccccccCCcccccccHHHHHHHHHHHccCCC-CCceEEEeCC-CC
Q 017914 206 DLGISAQVFRLGGIYGPGRSSVDTII--KQLPLSEGQKMRRARQYTSRIHVDDICQVLSASIDKPS-AWNVYNVVDD-DP 281 (364)
Q Consensus 206 ~~~~~~~ilRp~~v~g~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~-~g~~~~i~~~-~~ 281 (364)
+.+++++++||+.+++.....+.... ...........+.+++.++|++++|+|++++.++.++. .|+.|+++++ +.
T Consensus 147 ~~g~~~~ilrp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~~~g~~~~ 226 (313)
T 1qyd_A 147 AASIPYTYVSSNMFAGYFAGSLAQLDGHMMPPRDKVLIYGDGNVKGIWVDEDDVGTYTIKSIDDPQTLNKTMYIRPPMNI 226 (313)
T ss_dssp HTTCCBCEEECCEEHHHHTTTSSCTTCCSSCCSSEECCBTTSCSEEEEECHHHHHHHHHHHTTCGGGSSSEEECCCGGGE
T ss_pred hcCCCeEEEEeceeccccccccccccccccCCCCeEEEeCCCCceEEEEEHHHHHHHHHHHHhCcccCCceEEEeCCCCc
Confidence 45899999999998874211110000 00000111234567788999999999999999998874 4778888765 68
Q ss_pred CCHHHHHHHHHHHhcCCC
Q 017914 282 APREEVFAYAWDLVEKKW 299 (364)
Q Consensus 282 ~s~~el~~~i~~~~g~~~ 299 (364)
+|+.|+++.+.+.+|++.
T Consensus 227 ~s~~e~~~~~~~~~g~~~ 244 (313)
T 1qyd_A 227 LSQKEVIQIWERLSEQNL 244 (313)
T ss_dssp EEHHHHHHHHHHHHTCCC
T ss_pred cCHHHHHHHHHHhcCCCC
Confidence 999999999999999874
|
| >1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=2.3e-26 Score=209.34 Aligned_cols=216 Identities=14% Similarity=0.134 Sum_probs=162.7
Q ss_pred CCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhh--hhhhh-CCceEEEcc-CChhhH--HhhccCceeeEEEEec
Q 017914 59 PNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKK--KELEQ-SGFDVHLFN-ANETAL--MILTTLKNYTHLLVSI 131 (364)
Q Consensus 59 ~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~--~~l~~-~~~~~~~~D-~~~~~~--~~~~~~d~v~~~~~~~ 131 (364)
+|+||||| ||+||++|++.|+++|++|++++|+.++. ..+.. .+++++.+| ++|++. .+++++|.|+|+++..
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~l~~~~~v~~v~~D~l~d~~~l~~~~~~~d~Vi~~a~~~ 84 (352)
T 1xgk_A 5 KKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEELQAIPNVTLFQGPLLNNVPLMDTLFEGAHLAFINTTSQ 84 (352)
T ss_dssp CCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHHHHHHTSTTEEEEESCCTTCHHHHHHHHTTCSEEEECCCST
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCChhhHHHHhhcCCcEEEECCccCCHHHHHHHHhcCCEEEEcCCCC
Confidence 57899999 99999999999999999999999987654 33332 478899999 999774 6778999999987532
Q ss_pred CCCCCCCChhhhHHHHHHHHhhcCC-ccEEEEEccce--eecCCCCccccCCCCCCCCChhHHHHHHHHHHHHHhhhhcC
Q 017914 132 PPLEGTGDPMLKHGELLRSTLMNGH-LQWLGYLSSTG--VYGHSGGAWVDEDYPANPTTELGRLRLSAEKGWLNLGRDLG 208 (364)
Q Consensus 132 ~~~~~~~~~~~~~~~~l~~a~~~~~-~~r~v~~Ss~~--vy~~~~~~~~~E~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~ 208 (364)
. .+..... .++++++++.+ +++|||+||.. .|+. .+.+.|+.+|.++|+++++ .+
T Consensus 85 ~-----~~~~~~~-~~l~~aa~~~g~v~~~V~~SS~~~~~~~~------------~~~~~y~~sK~~~E~~~~~----~g 142 (352)
T 1xgk_A 85 A-----GDEIAIG-KDLADAAKRAGTIQHYIYSSMPDHSLYGP------------WPAVPMWAPKFTVENYVRQ----LG 142 (352)
T ss_dssp T-----SCHHHHH-HHHHHHHHHHSCCSEEEEEECCCGGGTSS------------CCCCTTTHHHHHHHHHHHT----SS
T ss_pred C-----cHHHHHH-HHHHHHHHHcCCccEEEEeCCccccccCC------------CCCccHHHHHHHHHHHHHH----cC
Confidence 1 1223333 88999998888 99999999975 2321 2336799999999999875 48
Q ss_pred CcEEEEEecceecCCCCh-HHHHHHhcCcccc----cccccCCcccccccH-HHHHHHHHHHccCCC---CCceEEEeCC
Q 017914 209 ISAQVFRLGGIYGPGRSS-VDTIIKQLPLSEG----QKMRRARQYTSRIHV-DDICQVLSASIDKPS---AWNVYNVVDD 279 (364)
Q Consensus 209 ~~~~ilRp~~v~g~~~~~-~~~~~~~~~~~~~----~~~~~~~~~~~~i~v-~Dva~~~~~~l~~~~---~g~~~~i~~~ 279 (364)
++++++||+ +||++... +..+........+ ..++.+++.++++|+ +|+|++++.+++++. .|++||+++
T Consensus 143 i~~~ivrpg-~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~v~~Dva~ai~~~l~~~~~~~~g~~~~l~~- 220 (352)
T 1xgk_A 143 LPSTFVYAG-IYNNNFTSLPYPLFQMELMPDGTFEWHAPFDPDIPLPWLDAEHDVGPALLQIFKDGPQKWNGHRIALTF- 220 (352)
T ss_dssp SCEEEEEEC-EEGGGCBSSSCSSCBEEECTTSCEEEEESSCTTSCEEEECHHHHHHHHHHHHHHHCHHHHTTCEEEECS-
T ss_pred CCEEEEecc-eecCCchhcccccccccccCCCceEEeeccCCCCceeeEecHHHHHHHHHHHHhCCchhhCCeEEEEec-
Confidence 999999986 67865321 1001100000111 113446788899999 899999999998752 588999996
Q ss_pred CCCCHHHHHHHHHHHhcCC
Q 017914 280 DPAPREEVFAYAWDLVEKK 298 (364)
Q Consensus 280 ~~~s~~el~~~i~~~~g~~ 298 (364)
+.+|+.|+++.+.+.+|.+
T Consensus 221 ~~~s~~e~~~~i~~~~G~~ 239 (352)
T 1xgk_A 221 ETLSPVQVCAAFSRALNRR 239 (352)
T ss_dssp EEECHHHHHHHHHHHHTSC
T ss_pred CCCCHHHHHHHHHHHHCCC
Confidence 6799999999999999987
|
| >2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa} | Back alignment and structure |
|---|
Probab=99.93 E-value=3.7e-26 Score=204.49 Aligned_cols=219 Identities=12% Similarity=0.087 Sum_probs=162.1
Q ss_pred CCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCc-------hhhh---hhhhCCceEEEccCChhhH--HhhccCceee
Q 017914 59 PNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNV-------MKKK---ELEQSGFDVHLFNANETAL--MILTTLKNYT 125 (364)
Q Consensus 59 ~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~-------~~~~---~l~~~~~~~~~~D~~~~~~--~~~~~~d~v~ 125 (364)
||+||||| ||+||++|+++|+++|++|++++|+. ++.. .+...+++++.+|++|++. .+++++|+|+
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~~~~~d~vi 81 (307)
T 2gas_A 2 ENKILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELIDNYQSLGVILLEGDINDHETLVKAIKQVDIVI 81 (307)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHHTCCEEEEECCSCCSSCHHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEE
T ss_pred CcEEEEECCCchHHHHHHHHHHhCCCcEEEEECCCcccCChHHHHHHHHHHHhCCCEEEEeCCCCHHHHHHHHhCCCEEE
Confidence 57899999 99999999999999999999999986 3322 2234689999999999774 7788999999
Q ss_pred EEEEecCCCCCCCChhhhHHHHHHHHhhcCC-ccEEEEEccceeecCCCCccccCCCCCCC-CChhHHHHHHHHHHHHHh
Q 017914 126 HLLVSIPPLEGTGDPMLKHGELLRSTLMNGH-LQWLGYLSSTGVYGHSGGAWVDEDYPANP-TTELGRLRLSAEKGWLNL 203 (364)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~-~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~-~~~Y~~sK~~~E~~~~~~ 203 (364)
|+++... .....++++++++.| ++|||+ | +||.. .+|..+..| .+.| .+|..+|++++
T Consensus 82 ~~a~~~~---------~~~~~~l~~aa~~~g~v~~~v~-S---~~g~~----~~~~~~~~p~~~~y-~sK~~~e~~~~-- 141 (307)
T 2gas_A 82 CAAGRLL---------IEDQVKIIKAIKEAGNVKKFFP-S---EFGLD----VDRHDAVEPVRQVF-EEKASIRRVIE-- 141 (307)
T ss_dssp ECSSSSC---------GGGHHHHHHHHHHHCCCSEEEC-S---CCSSC----TTSCCCCTTHHHHH-HHHHHHHHHHH--
T ss_pred ECCcccc---------cccHHHHHHHHHhcCCceEEee-c---ccccC----cccccCCCcchhHH-HHHHHHHHHHH--
Confidence 9986421 345678999998887 999984 3 35432 123333344 3578 99999999886
Q ss_pred hhhcCCcEEEEEecceecCCCChHHHHHHh-cCcccccccccCCcccccccHHHHHHHHHHHccCCC-CCceEEEeCC-C
Q 017914 204 GRDLGISAQVFRLGGIYGPGRSSVDTIIKQ-LPLSEGQKMRRARQYTSRIHVDDICQVLSASIDKPS-AWNVYNVVDD-D 280 (364)
Q Consensus 204 ~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~-~g~~~~i~~~-~ 280 (364)
..+++++++||+.+++.....+...... .........+.+++.++|++++|+|++++.++.++. .|+.|++.++ +
T Consensus 142 --~~~i~~~~lrp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~~~~~~~ 219 (307)
T 2gas_A 142 --AEGVPYTYLCCHAFTGYFLRNLAQLDATDPPRDKVVILGDGNVKGAYVTEADVGTFTIRAANDPNTLNKAVHIRLPKN 219 (307)
T ss_dssp --HHTCCBEEEECCEETTTTGGGTTCTTCSSCCSSEEEEETTSCSEEEEECHHHHHHHHHHHHTCGGGTTEEEECCCGGG
T ss_pred --HcCCCeEEEEcceeeccccccccccccccCCCCeEEEecCCCcceEEeeHHHHHHHHHHHHcCccccCceEEEeCCCC
Confidence 3589999999999887542211100000 000111223566788999999999999999998764 4778888764 6
Q ss_pred CCCHHHHHHHHHHHhcCCC
Q 017914 281 PAPREEVFAYAWDLVEKKW 299 (364)
Q Consensus 281 ~~s~~el~~~i~~~~g~~~ 299 (364)
.+|+.|+++.+.+.+|++.
T Consensus 220 ~~s~~e~~~~~~~~~g~~~ 238 (307)
T 2gas_A 220 YLTQNEVIALWEKKIGKTL 238 (307)
T ss_dssp EEEHHHHHHHHHHHHTSCC
T ss_pred cCCHHHHHHHHHHHhCCCC
Confidence 8999999999999999874
|
| >1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.93 E-value=2e-26 Score=206.32 Aligned_cols=219 Identities=13% Similarity=0.132 Sum_probs=162.1
Q ss_pred CCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchh------hh---hhhhCCceEEEccCChhhH--HhhccCceeeE
Q 017914 59 PNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMK------KK---ELEQSGFDVHLFNANETAL--MILTTLKNYTH 126 (364)
Q Consensus 59 ~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~------~~---~l~~~~~~~~~~D~~~~~~--~~~~~~d~v~~ 126 (364)
+|+||||| ||+||++|++.|+++|++|++++|+... .. .+...+++++.+|++|++. .+++++|+|+|
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~ 83 (308)
T 1qyc_A 4 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVEAVKNVDVVIS 83 (308)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHHHHHHHHHTCSEEEE
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCcccccCHHHHHHHHHHHhCCCEEEEeccCCHHHHHHHHcCCCEEEE
Confidence 57899999 9999999999999999999999997432 11 2234689999999999774 77889999999
Q ss_pred EEEecCCCCCCCChhhhHHHHHHHHhhcCC-ccEEEEEccceeecCCCCccccCCCCCCC-CChhHHHHHHHHHHHHHhh
Q 017914 127 LLVSIPPLEGTGDPMLKHGELLRSTLMNGH-LQWLGYLSSTGVYGHSGGAWVDEDYPANP-TTELGRLRLSAEKGWLNLG 204 (364)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~-~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~-~~~Y~~sK~~~E~~~~~~~ 204 (364)
+++... .....++++++++.+ ++|||+ |+ ||.. .+|..+..| ...| .+|..+|+++++
T Consensus 84 ~a~~~~---------~~~~~~l~~aa~~~g~v~~~v~-S~---~g~~----~~~~~~~~p~~~~y-~sK~~~e~~~~~-- 143 (308)
T 1qyc_A 84 TVGSLQ---------IESQVNIIKAIKEVGTVKRFFP-SE---FGND----VDNVHAVEPAKSVF-EVKAKVRRAIEA-- 143 (308)
T ss_dssp CCCGGG---------SGGGHHHHHHHHHHCCCSEEEC-SC---CSSC----TTSCCCCTTHHHHH-HHHHHHHHHHHH--
T ss_pred CCcchh---------hhhHHHHHHHHHhcCCCceEee-cc---cccC----ccccccCCcchhHH-HHHHHHHHHHHh--
Confidence 986421 345678999998888 999984 43 4422 223334444 3568 999999998864
Q ss_pred hhcCCcEEEEEecceecCCCChHHHHHHh-cCcccccccccCCcccccccHHHHHHHHHHHccCCC-CCceEEEeCC-CC
Q 017914 205 RDLGISAQVFRLGGIYGPGRSSVDTIIKQ-LPLSEGQKMRRARQYTSRIHVDDICQVLSASIDKPS-AWNVYNVVDD-DP 281 (364)
Q Consensus 205 ~~~~~~~~ilRp~~v~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~-~g~~~~i~~~-~~ 281 (364)
.+++++++||+.+++.....+...... .........+.+++.++|++++|+|++++.+++++. .+++|+++++ +.
T Consensus 144 --~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~~~g~~~~ 221 (308)
T 1qyc_A 144 --EGIPYTYVSSNCFAGYFLRSLAQAGLTAPPRDKVVILGDGNARVVFVKEEDIGTFTIKAVDDPRTLNKTLYLRLPANT 221 (308)
T ss_dssp --HTCCBEEEECCEEHHHHTTTTTCTTCSSCCSSEEEEETTSCCEEEEECHHHHHHHHHTTSSCGGGTTEEEECCCGGGE
T ss_pred --cCCCeEEEEeceeccccccccccccccCCCCCceEEecCCCceEEEecHHHHHHHHHHHHhCccccCeEEEEeCCCCc
Confidence 589999999999887432111000000 000111233567788999999999999999998764 4778888764 68
Q ss_pred CCHHHHHHHHHHHhcCCC
Q 017914 282 APREEVFAYAWDLVEKKW 299 (364)
Q Consensus 282 ~s~~el~~~i~~~~g~~~ 299 (364)
+|+.|+++.+.+.+|++.
T Consensus 222 ~s~~e~~~~~~~~~g~~~ 239 (308)
T 1qyc_A 222 LSLNELVALWEKKIDKTL 239 (308)
T ss_dssp EEHHHHHHHHHHHTTSCC
T ss_pred cCHHHHHHHHHHHhCCCC
Confidence 999999999999999874
|
| >3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri} | Back alignment and structure |
|---|
Probab=99.93 E-value=9.7e-26 Score=203.10 Aligned_cols=218 Identities=9% Similarity=0.026 Sum_probs=163.3
Q ss_pred CCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCc-h-----hhhh---hhhCCceEEEccCChhhH--HhhccCceee
Q 017914 58 SPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNV-M-----KKKE---LEQSGFDVHLFNANETAL--MILTTLKNYT 125 (364)
Q Consensus 58 ~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~-~-----~~~~---l~~~~~~~~~~D~~~~~~--~~~~~~d~v~ 125 (364)
++|+||||| ||+||++|+++|+++|++|++++|+. . +... +...+++++.+|++|++. .+++++|+|+
T Consensus 3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~l~~~~~~~v~~v~~D~~d~~~l~~a~~~~d~vi 82 (321)
T 3c1o_A 3 HMEKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEFRSMGVTIIEGEMEEHEKMVSVLKQVDIVI 82 (321)
T ss_dssp -CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECCCCTTCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEE
T ss_pred cccEEEEEcCCchhHHHHHHHHHhCCCcEEEEECCcccccChHHHHHHHHhhcCCcEEEEecCCCHHHHHHHHcCCCEEE
Confidence 357899999 99999999999999999999999986 2 2221 234689999999999774 7788999999
Q ss_pred EEEEecCCCCCCCChhhhHHHHHHHHhhcCC-ccEEEEEccceeecCCCCccccCCCCCCC-CChhHHHHHHHHHHHHHh
Q 017914 126 HLLVSIPPLEGTGDPMLKHGELLRSTLMNGH-LQWLGYLSSTGVYGHSGGAWVDEDYPANP-TTELGRLRLSAEKGWLNL 203 (364)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~-~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~-~~~Y~~sK~~~E~~~~~~ 203 (364)
|+++... .....++++++++.+ ++|||+ | +||.. .+|..+..| .+.| .+|..+|.+++
T Consensus 83 ~~a~~~~---------~~~~~~l~~aa~~~g~v~~~v~-S---~~g~~----~~~~~~~~p~~~~y-~sK~~~e~~~~-- 142 (321)
T 3c1o_A 83 SALPFPM---------ISSQIHIINAIKAAGNIKRFLP-S---DFGCE----EDRIKPLPPFESVL-EKKRIIRRAIE-- 142 (321)
T ss_dssp ECCCGGG---------SGGGHHHHHHHHHHCCCCEEEC-S---CCSSC----GGGCCCCHHHHHHH-HHHHHHHHHHH--
T ss_pred ECCCccc---------hhhHHHHHHHHHHhCCccEEec-c---ccccC----ccccccCCCcchHH-HHHHHHHHHHH--
Confidence 9986421 345678999998888 999983 3 35432 233333333 4578 99999999886
Q ss_pred hhhcCCcEEEEEecceecCCCChHHHHHHhc--Ccc--cccccccCCcccccccHHHHHHHHHHHccCCC-CCceEEEeC
Q 017914 204 GRDLGISAQVFRLGGIYGPGRSSVDTIIKQL--PLS--EGQKMRRARQYTSRIHVDDICQVLSASIDKPS-AWNVYNVVD 278 (364)
Q Consensus 204 ~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~--~~~--~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~-~g~~~~i~~ 278 (364)
..+++++++||+.+++.. +..+.... ... .....+.++..++|++++|+|++++.++.++. .|++|++++
T Consensus 143 --~~~~~~~~lrp~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~~g~~~~~~g 217 (321)
T 3c1o_A 143 --AAALPYTYVSANCFGAYF---VNYLLHPSPHPNRNDDIVIYGTGETKFVLNYEEDIAKYTIKVACDPRCCNRIVIYRP 217 (321)
T ss_dssp --HHTCCBEEEECCEEHHHH---HHHHHCCCSSCCTTSCEEEETTSCCEEEEECHHHHHHHHHHHHHCGGGTTEEEECCC
T ss_pred --HcCCCeEEEEeceecccc---ccccccccccccccCceEEecCCCcceeEeeHHHHHHHHHHHHhCccccCeEEEEeC
Confidence 358999999999887742 22222210 011 11233567788999999999999999998764 478888876
Q ss_pred C-CCCCHHHHHHHHHHHhcCCCC
Q 017914 279 D-DPAPREEVFAYAWDLVEKKWP 300 (364)
Q Consensus 279 ~-~~~s~~el~~~i~~~~g~~~~ 300 (364)
+ +.+|+.|+++.+.+.+|.+.+
T Consensus 218 ~~~~~t~~e~~~~~~~~~g~~~~ 240 (321)
T 3c1o_A 218 PKNIISQNELISLWEAKSGLSFK 240 (321)
T ss_dssp GGGEEEHHHHHHHHHHHHTSCCC
T ss_pred CCCcccHHHHHHHHHHHcCCcce
Confidence 4 789999999999999998743
|
| >2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.93 E-value=6.9e-27 Score=198.23 Aligned_cols=196 Identities=13% Similarity=0.089 Sum_probs=145.9
Q ss_pred CCCeEEEEc-CChhhHHHHHHHHhCCC--EEEEEEeCchhhhhhhhCCceEEEccCChhhH--HhhccCceeeEEEEecC
Q 017914 58 SPNRMLILG-MGFVGRIFAEKIKNQGW--VVSGTCTNVMKKKELEQSGFDVHLFNANETAL--MILTTLKNYTHLLVSIP 132 (364)
Q Consensus 58 ~~~~vlVtG-tG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~--~~~~~~d~v~~~~~~~~ 132 (364)
++|+||||| +|+||++++++|+++|+ +|++++|++.+ ...+++++.+|++|.+. ..+ +|.|+|+++...
T Consensus 4 ~~~~vlVtGatG~iG~~l~~~l~~~g~~~~V~~~~r~~~~----~~~~~~~~~~D~~~~~~~~~~~--~d~vi~~a~~~~ 77 (215)
T 2a35_A 4 TPKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALA----EHPRLDNPVGPLAELLPQLDGS--IDTAFCCLGTTI 77 (215)
T ss_dssp CCCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCC----CCTTEECCBSCHHHHGGGCCSC--CSEEEECCCCCH
T ss_pred CCceEEEECCCcHHHHHHHHHHHhCCCCCeEEEEeCCCcc----cCCCceEEeccccCHHHHHHhh--hcEEEECeeecc
Confidence 468999999 99999999999999998 99999998765 22578888999998763 334 899999987432
Q ss_pred CC-CCC---CChhhhHHHHHHHHhhcCCccEEEEEccceeecCCCCccccCCCCCCCCChhHHHHHHHHHHHHHhhhhcC
Q 017914 133 PL-EGT---GDPMLKHGELLRSTLMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANPTTELGRLRLSAEKGWLNLGRDLG 208 (364)
Q Consensus 133 ~~-~~~---~~~~~~~~~~l~~a~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~ 208 (364)
.. ... .+.......++++++++.++++|||+||.++|+. +.+.|+.+|.++|+++++ .+
T Consensus 78 ~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~-------------~~~~y~~sK~~~e~~~~~----~~ 140 (215)
T 2a35_A 78 KEAGSEEAFRAVDFDLPLAVGKRALEMGARHYLVVSALGADAK-------------SSIFYNRVKGELEQALQE----QG 140 (215)
T ss_dssp HHHSSHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCTT-------------CSSHHHHHHHHHHHHHTT----SC
T ss_pred ccCCCHHHHHHhhHHHHHHHHHHHHHcCCCEEEEECCcccCCC-------------CccHHHHHHHHHHHHHHH----cC
Confidence 10 000 0112334567888888888999999999988752 346899999999998864 48
Q ss_pred Cc-EEEEEecceecCCCC--hHHHHHHhcCcccccccccCCcccccccHHHHHHHHHHHccCCCCCceEEEeCCCCCCH
Q 017914 209 IS-AQVFRLGGIYGPGRS--SVDTIIKQLPLSEGQKMRRARQYTSRIHVDDICQVLSASIDKPSAWNVYNVVDDDPAPR 284 (364)
Q Consensus 209 ~~-~~ilRp~~v~g~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~~g~~~~i~~~~~~s~ 284 (364)
++ ++++||+.+||+... ++..+. ........ ..++++|++|+|++++.+++++. +++||+++++.+++
T Consensus 141 ~~~~~~vrp~~v~g~~~~~~~~~~~~-----~~~~~~~~--~~~~~i~~~Dva~~~~~~~~~~~-~~~~~i~~~~~~~~ 211 (215)
T 2a35_A 141 WPQLTIARPSLLFGPREEFRLAEILA-----APIARILP--GKYHGIEACDLARALWRLALEEG-KGVRFVESDELRKL 211 (215)
T ss_dssp CSEEEEEECCSEESTTSCEEGGGGTT-----CCCC------CHHHHHHHHHHHHHHHHHHTCCC-SEEEEEEHHHHHHH
T ss_pred CCeEEEEeCceeeCCCCcchHHHHHH-----HhhhhccC--CCcCcEeHHHHHHHHHHHHhcCC-CCceEEcHHHHHHh
Confidence 99 999999999998754 222111 11111122 26789999999999999999876 77999998764443
|
| >2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=1.5e-25 Score=201.63 Aligned_cols=217 Identities=12% Similarity=0.053 Sum_probs=162.6
Q ss_pred CCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCch-hhh---hhhhCCceEEEccCChhhH--HhhccCceeeEEEEe
Q 017914 58 SPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVM-KKK---ELEQSGFDVHLFNANETAL--MILTTLKNYTHLLVS 130 (364)
Q Consensus 58 ~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~-~~~---~l~~~~~~~~~~D~~~~~~--~~~~~~d~v~~~~~~ 130 (364)
|+++||||| ||+||++++++|+++|++|++++|+.. ... .+...+++++.+|++|++. .+++++|+|+|+++.
T Consensus 10 m~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~l~~~~v~~v~~Dl~d~~~l~~a~~~~d~vi~~a~~ 89 (318)
T 2r6j_A 10 MKSKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLLDEFQSLGAIIVKGELDEHEKLVELMKKVDVVISALAF 89 (318)
T ss_dssp CCCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTCSCHHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEEECCCG
T ss_pred CCCeEEEECCCchHHHHHHHHHHHCCCcEEEEECCCCchhhHHHHhhcCCCEEEEecCCCHHHHHHHHcCCCEEEECCch
Confidence 346899999 999999999999999999999999874 222 2334789999999999774 778899999999864
Q ss_pred cCCCCCCCChhhhHHHHHHHHhhcCC-ccEEEEEccceeecCCCCccccCCCCCCC-CChhHHHHHHHHHHHHHhhhhcC
Q 017914 131 IPPLEGTGDPMLKHGELLRSTLMNGH-LQWLGYLSSTGVYGHSGGAWVDEDYPANP-TTELGRLRLSAEKGWLNLGRDLG 208 (364)
Q Consensus 131 ~~~~~~~~~~~~~~~~~l~~a~~~~~-~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~-~~~Y~~sK~~~E~~~~~~~~~~~ 208 (364)
.. .....++++++++.+ ++|||+ | +||.. .+|..+..| ...| .+|..+|+++++ .+
T Consensus 90 ~~---------~~~~~~l~~aa~~~g~v~~~v~-S---~~g~~----~~~~~~~~p~~~~y-~sK~~~e~~~~~----~~ 147 (318)
T 2r6j_A 90 PQ---------ILDQFKILEAIKVAGNIKRFLP-S---DFGVE----EDRINALPPFEALI-ERKRMIRRAIEE----AN 147 (318)
T ss_dssp GG---------STTHHHHHHHHHHHCCCCEEEC-S---CCSSC----TTTCCCCHHHHHHH-HHHHHHHHHHHH----TT
T ss_pred hh---------hHHHHHHHHHHHhcCCCCEEEe-e---ccccC----cccccCCCCcchhH-HHHHHHHHHHHh----cC
Confidence 21 344678999998887 999985 4 35432 122233333 2468 999999998863 58
Q ss_pred CcEEEEEecceecCCCChHHHHHHhc-CcccccccccCCcccccccHHHHHHHHHHHccCCC-CCceEEEeCC-CCCCHH
Q 017914 209 ISAQVFRLGGIYGPGRSSVDTIIKQL-PLSEGQKMRRARQYTSRIHVDDICQVLSASIDKPS-AWNVYNVVDD-DPAPRE 285 (364)
Q Consensus 209 ~~~~ilRp~~v~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~-~g~~~~i~~~-~~~s~~ 285 (364)
++++++||+.+++. ++..+.... ........+.+++.++|++++|+|++++.++.++. .+++|+++++ +.+|+.
T Consensus 148 ~~~~~lr~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~~~g~~~~~s~~ 224 (318)
T 2r6j_A 148 IPYTYVSANCFASY---FINYLLRPYDPKDEITVYGTGEAKFAMNYEQDIGLYTIKVATDPRALNRVVIYRPSTNIITQL 224 (318)
T ss_dssp CCBEEEECCEEHHH---HHHHHHCTTCCCSEEEEETTSCCEEEEECHHHHHHHHHHHTTCGGGTTEEEECCCGGGEEEHH
T ss_pred CCeEEEEcceehhh---hhhhhccccCCCCceEEecCCCceeeEeeHHHHHHHHHHHhcCccccCeEEEecCCCCccCHH
Confidence 99999999887763 233332221 11111234567788999999999999999998764 4778888754 789999
Q ss_pred HHHHHHHHHhcCCC
Q 017914 286 EVFAYAWDLVEKKW 299 (364)
Q Consensus 286 el~~~i~~~~g~~~ 299 (364)
|+++.+.+.+|++.
T Consensus 225 e~~~~~~~~~g~~~ 238 (318)
T 2r6j_A 225 ELISRWEKKIGKKF 238 (318)
T ss_dssp HHHHHHHHHHTCCC
T ss_pred HHHHHHHHHhCCCC
Confidence 99999999999874
|
| >3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A} | Back alignment and structure |
|---|
Probab=99.92 E-value=1.2e-24 Score=187.21 Aligned_cols=198 Identities=11% Similarity=0.087 Sum_probs=140.9
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCC-CEEEEEEeCchhhhhhhhCCceEEEccCChhhH--HhhccCceeeEEEEecC
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQG-WVVSGTCTNVMKKKELEQSGFDVHLFNANETAL--MILTTLKNYTHLLVSIP 132 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~--~~~~~~d~v~~~~~~~~ 132 (364)
++||+||||| +|+||++|+++|+++| ++|++++|++++...+...++.++.+|++|++. ..++++|+|+|+++.
T Consensus 21 ~~mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vv~~a~~-- 98 (236)
T 3qvo_A 21 GHMKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHKPYPTNSQIIMGDVLNHAALKQAMQGQDIVYANLTG-- 98 (236)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGSCSSCCTTEEEEECCTTCHHHHHHHHTTCSEEEEECCS--
T ss_pred CcccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhhcccccCCcEEEEecCCCHHHHHHHhcCCCEEEEcCCC--
Confidence 4567899999 9999999999999999 999999999887766655789999999999774 677899999998853
Q ss_pred CCCCCCChhhhHHHHHHHHhhcCCccEEEEEccceeecCCCCcc--ccCCCCCCCCChhHHHHHHHHHHHHHhhhhcCCc
Q 017914 133 PLEGTGDPMLKHGELLRSTLMNGHLQWLGYLSSTGVYGHSGGAW--VDEDYPANPTTELGRLRLSAEKGWLNLGRDLGIS 210 (364)
Q Consensus 133 ~~~~~~~~~~~~~~~l~~a~~~~~~~r~v~~Ss~~vy~~~~~~~--~~E~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~ 210 (364)
.......++++.++++.++++||++||.++|+.....+ .++..... +...+..+|..++ ..+++
T Consensus 99 ------~~~~~~~~~~~~~~~~~~~~~iV~iSS~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~l~----~~gi~ 164 (236)
T 3qvo_A 99 ------EDLDIQANSVIAAMKACDVKRLIFVLSLGIYDEVPGKFVEWNNAVIGE----PLKPFRRAADAIE----ASGLE 164 (236)
T ss_dssp ------TTHHHHHHHHHHHHHHTTCCEEEEECCCCC----------------CG----GGHHHHHHHHHHH----TSCSE
T ss_pred ------CchhHHHHHHHHHHHHcCCCEEEEEecceecCCCCcccccchhhcccc----hHHHHHHHHHHHH----HCCCC
Confidence 12234467889999988999999999999998654432 23332222 3334445555553 56999
Q ss_pred EEEEEecceecCCCChHHHHHHhcCcccccccccCCcccccccHHHHHHHHHHHccCCC--CCceEEEeCCCC
Q 017914 211 AQVFRLGGIYGPGRSSVDTIIKQLPLSEGQKMRRARQYTSRIHVDDICQVLSASIDKPS--AWNVYNVVDDDP 281 (364)
Q Consensus 211 ~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~--~g~~~~i~~~~~ 281 (364)
+++||||.++++....+. ..... ......+++++|+|++++.++.++. .|+.|++++|+.
T Consensus 165 ~~~vrPg~i~~~~~~~~~------~~~~~-----~~~~~~~i~~~DvA~~i~~ll~~~~~~~g~~~~i~~~~~ 226 (236)
T 3qvo_A 165 YTILRPAWLTDEDIIDYE------LTSRN-----EPFKGTIVSRKSVAALITDIIDKPEKHIGENIGINQPGT 226 (236)
T ss_dssp EEEEEECEEECCSCCCCE------EECTT-----SCCSCSEEEHHHHHHHHHHHHHSTTTTTTEEEEEECSSC
T ss_pred EEEEeCCcccCCCCcceE------EeccC-----CCCCCcEECHHHHHHHHHHHHcCcccccCeeEEecCCCC
Confidence 999999999987532110 00000 0111357999999999999999876 589999998753
|
| >2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A | Back alignment and structure |
|---|
Probab=99.91 E-value=5.8e-24 Score=183.58 Aligned_cols=200 Identities=14% Similarity=0.073 Sum_probs=144.7
Q ss_pred CCCeEEEEc-CChhhHHHHHHHHhCCC--EEEEEEeCchhhhhhhhCCceEEEccCChhhH--HhhccCceeeEEEEecC
Q 017914 58 SPNRMLILG-MGFVGRIFAEKIKNQGW--VVSGTCTNVMKKKELEQSGFDVHLFNANETAL--MILTTLKNYTHLLVSIP 132 (364)
Q Consensus 58 ~~~~vlVtG-tG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~--~~~~~~d~v~~~~~~~~ 132 (364)
.+|+||||| +|+||++++++|+++|+ +|++++|++++.......++.++.+|++|.+. ..++++|+|+|+++...
T Consensus 17 ~~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ag~~~ 96 (242)
T 2bka_A 17 QNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAYKNVNQEVVDFEKLDDYASAFQGHDVGFCCLGTTR 96 (242)
T ss_dssp TCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGGGGGCEEEECCGGGGGGGGGGGSSCSEEEECCCCCH
T ss_pred cCCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCccccccCCceEEecCcCCHHHHHHHhcCCCEEEECCCccc
Confidence 458999999 99999999999999999 99999998766544434578899999999764 66788999999987422
Q ss_pred CCCCC---CChhhhHHHHHHHHhhcCCccEEEEEccceeecCCCCccccCCCCCCCCChhHHHHHHHHHHHHHhhhhcCC
Q 017914 133 PLEGT---GDPMLKHGELLRSTLMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANPTTELGRLRLSAEKGWLNLGRDLGI 209 (364)
Q Consensus 133 ~~~~~---~~~~~~~~~~l~~a~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~ 209 (364)
..... .+.......++++++++.++++||++||.++|+. +...|+.+|...|.+++.+ ++
T Consensus 97 ~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~iv~~SS~~~~~~-------------~~~~Y~~sK~~~e~~~~~~----~~ 159 (242)
T 2bka_A 97 GKAGAEGFVRVDRDYVLKSAELAKAGGCKHFNLLSSKGADKS-------------SNFLYLQVKGEVEAKVEEL----KF 159 (242)
T ss_dssp HHHHHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCTT-------------CSSHHHHHHHHHHHHHHTT----CC
T ss_pred ccCCcccceeeeHHHHHHHHHHHHHCCCCEEEEEccCcCCCC-------------CcchHHHHHHHHHHHHHhc----CC
Confidence 11000 0112234467778888888899999999988752 2368999999999998753 66
Q ss_pred -cEEEEEecceecCCCCh--HHHHHHhcCcccccccccCCcccccccHHHHHHHHHHHccCCCCCceEEEeC
Q 017914 210 -SAQVFRLGGIYGPGRSS--VDTIIKQLPLSEGQKMRRARQYTSRIHVDDICQVLSASIDKPSAWNVYNVVD 278 (364)
Q Consensus 210 -~~~ilRp~~v~g~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~~g~~~~i~~ 278 (364)
+++++|||.++|+.... ...+.....-......+ ...+++++|+|++++.++.++..++.|++.+
T Consensus 160 ~~~~~vrpg~v~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~dva~~~~~~~~~~~~~~~~~~~~ 227 (242)
T 2bka_A 160 DRYSVFRPGVLLCDRQESRPGEWLVRKFFGSLPDSWA----SGHSVPVVTVVRAMLNNVVRPRDKQMELLEN 227 (242)
T ss_dssp SEEEEEECCEEECTTGGGSHHHHHHHHHHCSCCTTGG----GGTEEEHHHHHHHHHHHHTSCCCSSEEEEEH
T ss_pred CCeEEEcCceecCCCCCCcHHHHHHHHhhcccCcccc----CCcccCHHHHHHHHHHHHhCccccCeeEeeH
Confidence 59999999999986432 22222211000010111 2347999999999999999887766777654
|
| >3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=9.1e-23 Score=173.62 Aligned_cols=196 Identities=9% Similarity=0.027 Sum_probs=145.0
Q ss_pred CCCeEEEEc-CChhhHHHHHHHH-hCCCEEEEEEeCch-hhhhh--hhCCceEEEccCChhhH--HhhccCceeeEEEEe
Q 017914 58 SPNRMLILG-MGFVGRIFAEKIK-NQGWVVSGTCTNVM-KKKEL--EQSGFDVHLFNANETAL--MILTTLKNYTHLLVS 130 (364)
Q Consensus 58 ~~~~vlVtG-tG~iG~~l~~~L~-~~g~~V~~~~r~~~-~~~~l--~~~~~~~~~~D~~~~~~--~~~~~~d~v~~~~~~ 130 (364)
||++||||| +|+||++++++|+ ++|++|++++|+++ +...+ ...++.++.+|++|.+. ..++++|+|+|+++.
T Consensus 4 mmk~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vv~~ag~ 83 (221)
T 3r6d_A 4 MYXYITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEIIDHERVTVIEGSFQNPGXLEQAVTNAEVVFVGAME 83 (221)
T ss_dssp SCSEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHHHHSCHHHHTSTTEEEEECCTTCHHHHHHHHTTCSEEEESCCC
T ss_pred eEEEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCccccchhhccCCCceEEEECCCCCHHHHHHHHcCCCEEEEcCCC
Confidence 345699999 9999999999999 89999999999988 66655 45688999999999774 677899999999863
Q ss_pred cCCCCCCCChhhhHHHHHHHHhhcCCccEEEEEccceeecCCCCccccCCCCCCCCC-hhHHHHHHHHHHHHHhhhhcCC
Q 017914 131 IPPLEGTGDPMLKHGELLRSTLMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANPTT-ELGRLRLSAEKGWLNLGRDLGI 209 (364)
Q Consensus 131 ~~~~~~~~~~~~~~~~~l~~a~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~-~Y~~sK~~~E~~~~~~~~~~~~ 209 (364)
. ... ..+++.++++.+++|||++||.++|+........+..+ ... .|+.+|...|.+++ ..++
T Consensus 84 ~---------n~~-~~~~~~~~~~~~~~~iv~iSs~~~~~~~~~~~~~~~~~--~~~~~y~~~K~~~e~~~~----~~~i 147 (221)
T 3r6d_A 84 S---------GSD-MASIVKALSRXNIRRVIGVSMAGLSGEFPVALEKWTFD--NLPISYVQGERQARNVLR----ESNL 147 (221)
T ss_dssp C---------HHH-HHHHHHHHHHTTCCEEEEEEETTTTSCSCHHHHHHHHH--TSCHHHHHHHHHHHHHHH----HSCS
T ss_pred C---------Chh-HHHHHHHHHhcCCCeEEEEeeceecCCCCccccccccc--ccccHHHHHHHHHHHHHH----hCCC
Confidence 1 112 77888889888999999999998886433211111010 122 79999999999886 4689
Q ss_pred cEEEEEecceecCC-CChHHHHHHhcCcccccccccCCcccccccHHHHHHHHHHHc--cCCC--CCceEEEeCCC
Q 017914 210 SAQVFRLGGIYGPG-RSSVDTIIKQLPLSEGQKMRRARQYTSRIHVDDICQVLSASI--DKPS--AWNVYNVVDDD 280 (364)
Q Consensus 210 ~~~ilRp~~v~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l--~~~~--~g~~~~i~~~~ 280 (364)
++++||||.++++. ...+ ..... .......+++.+|+|++++.++ .++. .++.+.++++.
T Consensus 148 ~~~~vrpg~v~~~~~~~~~-------~~~~~----~~~~~~~~~~~~dvA~~~~~l~~~~~~~~~~~~~~~i~~~~ 212 (221)
T 3r6d_A 148 NYTILRLTWLYNDPEXTDY-------ELIPE----GAQFNDAQVSREAVVKAIFDILHAADETPFHRTSIGVGEPG 212 (221)
T ss_dssp EEEEEEECEEECCTTCCCC-------EEECT----TSCCCCCEEEHHHHHHHHHHHHTCSCCGGGTTEEEEEECTT
T ss_pred CEEEEechhhcCCCCCcce-------eeccC----CccCCCceeeHHHHHHHHHHHHHhcChhhhhcceeeecCCC
Confidence 99999999999873 2110 00000 0011123699999999999999 7764 36788888654
|
| >2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=3.2e-22 Score=176.32 Aligned_cols=223 Identities=9% Similarity=-0.024 Sum_probs=154.4
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhh-----CCceEEEccCChhhH--Hhh-------ccC
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQ-----SGFDVHLFNANETAL--MIL-------TTL 121 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~-----~~~~~~~~D~~~~~~--~~~-------~~~ 121 (364)
..+++||||| +|+||++++++|+++|++|++++|+......+.. .++.++.+|++|.+. ..+ ..+
T Consensus 14 l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 93 (278)
T 2bgk_A 14 LQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAKHGKL 93 (278)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred ccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCChhHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 4568999999 9999999999999999999999998765443221 268899999999763 333 268
Q ss_pred ceeeEEEEecCCC-CCCC-----ChhhhHHH------HHHHHh----hcCCccEEEEEccceeecCCCCccccCCCCCCC
Q 017914 122 KNYTHLLVSIPPL-EGTG-----DPMLKHGE------LLRSTL----MNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANP 185 (364)
Q Consensus 122 d~v~~~~~~~~~~-~~~~-----~~~~~~~~------~l~~a~----~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~ 185 (364)
|+++|+++..... .... +....... ++..++ ...+.+++|++||...|.... .+
T Consensus 94 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~----------~~ 163 (278)
T 2bgk_A 94 DIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAGE----------GV 163 (278)
T ss_dssp CEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGTCCCT----------TS
T ss_pred CEEEECCcccCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCeEEEEeeccccCCCC----------CC
Confidence 9999999765321 1111 11111112 233322 234677999999987764321 13
Q ss_pred CChhHHHHHHHHHHHHHhhhh---cCCcEEEEEecceecCCCChH----HHHHHhcCcccccccccCCcccccccHHHHH
Q 017914 186 TTELGRLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRSSV----DTIIKQLPLSEGQKMRRARQYTSRIHVDDIC 258 (364)
Q Consensus 186 ~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva 258 (364)
...|+.+|...|.+++.++.+ .|++++++|||.++++..... ........ . ..+.....+++++|+|
T Consensus 164 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~--~----~~~~~~~~~~~~~dva 237 (278)
T 2bgk_A 164 SHVYTATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVFGVDSSRVEELA--H----QAANLKGTLLRAEDVA 237 (278)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTSSSCCHHHHHHHH--H----HTCSSCSCCCCHHHHH
T ss_pred CcchHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeceecchhhhhhcccchhHHHHhh--h----cccccccccCCHHHHH
Confidence 468999999999999988754 589999999999999853211 11111100 0 0011124568999999
Q ss_pred HHHHHHccCC---CCCceEEEeCCCCCCHHHHHHHHHHHh
Q 017914 259 QVLSASIDKP---SAWNVYNVVDDDPAPREEVFAYAWDLV 295 (364)
Q Consensus 259 ~~~~~~l~~~---~~g~~~~i~~~~~~s~~el~~~i~~~~ 295 (364)
++++.++... ..|+.|++.+|..+++.|+++.+.+.+
T Consensus 238 ~~~~~l~~~~~~~~~G~~~~v~gg~~~~~~e~~~~i~~~~ 277 (278)
T 2bgk_A 238 DAVAYLAGDESKYVSGLNLVIDGGYTRTNPAFPTALKHGL 277 (278)
T ss_dssp HHHHHHHSGGGTTCCSCEEEESTTGGGCCTHHHHHSCSCC
T ss_pred HHHHHHcCcccccCCCCEEEECCcccccCCccchhhhhhc
Confidence 9999999753 348999999999999999998876543
|
| >3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis} | Back alignment and structure |
|---|
Probab=99.88 E-value=1.4e-22 Score=178.91 Aligned_cols=222 Identities=11% Similarity=-0.013 Sum_probs=154.7
Q ss_pred CCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhh---CCceEEEccCChhhH--Hhh-------ccCcee
Q 017914 58 SPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQ---SGFDVHLFNANETAL--MIL-------TTLKNY 124 (364)
Q Consensus 58 ~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~---~~~~~~~~D~~~~~~--~~~-------~~~d~v 124 (364)
++|+||||| +|+||++++++|+++|++|++++|+.++...+.. .++.++.+|++|.+. ..+ ..+|++
T Consensus 4 ~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~l 83 (281)
T 3m1a_A 4 SAKVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLVAAYPDRAEAISLDVTDGERIDVVAADVLARYGRVDVL 83 (281)
T ss_dssp CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHCTTTEEEEECCTTCHHHHHHHHHHHHHHHSCCSEE
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCCceEEEeeCCCHHHHHHHHHHHHHhCCCCCEE
Confidence 468999999 9999999999999999999999998876655432 468899999999764 222 378999
Q ss_pred eEEEEecCCCCCCC----ChhhhH----------HHHHHHHhhcCCccEEEEEccceeecCCCCccccCCCCCCCCChhH
Q 017914 125 THLLVSIPPLEGTG----DPMLKH----------GELLRSTLMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANPTTELG 190 (364)
Q Consensus 125 ~~~~~~~~~~~~~~----~~~~~~----------~~~l~~a~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~ 190 (364)
+|+++......... +..... ...++..+++.+.+++|++||...+. +..+...|+
T Consensus 84 v~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~-----------~~~~~~~Y~ 152 (281)
T 3m1a_A 84 VNNAGRTQVGAFEETTERELRDLFELHVFGPARLTRALLPQMRERGSGSVVNISSFGGQL-----------SFAGFSAYS 152 (281)
T ss_dssp EECCCCEEECCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTC-----------CCTTCHHHH
T ss_pred EECCCcCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEcCccccC-----------CCCCchHHH
Confidence 99998643321111 111111 22334444556678999999976542 223457899
Q ss_pred HHHHHHHHHHHHhhhh---cCCcEEEEEecceecCCCC------------hHHHHHHhcCcccccccccCCcccccccHH
Q 017914 191 RLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRS------------SVDTIIKQLPLSEGQKMRRARQYTSRIHVD 255 (364)
Q Consensus 191 ~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~ 255 (364)
.+|...|.+++.++.+ .|+++++++||.+.++..+ ........... ........+.+++
T Consensus 153 ~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~ 226 (281)
T 3m1a_A 153 ATKAALEQLSEGLADEVAPFGIKVLIVEPGAFRTNLFGKGAAYFSEENPAYAEKVGPTRQL------VQGSDGSQPGDPA 226 (281)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTCCCCEEECCBCTTTHHHHHHHHHH------HHC-----CBCHH
T ss_pred HHHHHHHHHHHHHHHHhhccCcEEEEEecCccccccccccccccCCcchhhHHHhHHHHHH------HhhccCCCCCCHH
Confidence 9999999999998766 6899999999998776421 11111111010 1112234568899
Q ss_pred HHHHHHHHHccCCCCCceEEEeCCCCCCHHHHHHHHHHHhc
Q 017914 256 DICQVLSASIDKPSAWNVYNVVDDDPAPREEVFAYAWDLVE 296 (364)
Q Consensus 256 Dva~~~~~~l~~~~~g~~~~i~~~~~~s~~el~~~i~~~~g 296 (364)
|+|++++.+++++..+..|+++++......+....+.+.++
T Consensus 227 dva~a~~~~~~~~~~~~~~~l~s~~~~~i~g~~~~i~~~~~ 267 (281)
T 3m1a_A 227 KAAAAIRLALDTEKTPLRLALGGDAVDFLTGHLDSVRAELT 267 (281)
T ss_dssp HHHHHHHHHHHSSSCCSEEEESHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCeEEecCchHHHHHHHHHHHHHHHHH
Confidence 99999999999988888999998876667777777666654
|
| >2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP} | Back alignment and structure |
|---|
Probab=99.88 E-value=1.3e-22 Score=176.36 Aligned_cols=213 Identities=12% Similarity=0.004 Sum_probs=142.3
Q ss_pred CCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCChhhH--Hhhc----cCceeeEEEEec
Q 017914 59 PNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETAL--MILT----TLKNYTHLLVSI 131 (364)
Q Consensus 59 ~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~--~~~~----~~d~v~~~~~~~ 131 (364)
||+||||| +|+||++++++|+++|++|++++|+.++... .+.+|++|.+. ..++ .+|+|+|+++..
T Consensus 1 Mk~vlVtGasg~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-------~~~~D~~~~~~~~~~~~~~~~~~d~vi~~Ag~~ 73 (255)
T 2dkn_A 1 MSVIAITGSASGIGAALKELLARAGHTVIGIDRGQADIEA-------DLSTPGGRETAVAAVLDRCGGVLDGLVCCAGVG 73 (255)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC-------CTTSHHHHHHHHHHHHHHHTTCCSEEEECCCCC
T ss_pred CcEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCChhHccc-------cccCCcccHHHHHHHHHHcCCCccEEEECCCCC
Confidence 46899999 9999999999999999999999998654321 15689888663 3343 789999999764
Q ss_pred CCCCCCCChhhh------HHHHHHHHh----hcCCccEEEEEccceeecCCCCc-ccc-------CCC-------CCCCC
Q 017914 132 PPLEGTGDPMLK------HGELLRSTL----MNGHLQWLGYLSSTGVYGHSGGA-WVD-------EDY-------PANPT 186 (364)
Q Consensus 132 ~~~~~~~~~~~~------~~~~l~~a~----~~~~~~r~v~~Ss~~vy~~~~~~-~~~-------E~~-------~~~~~ 186 (364)
... .+.... ...++.+++ ++.+.+++|++||..+|+..... +.. |+. +..+.
T Consensus 74 ~~~---~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (255)
T 2dkn_A 74 VTA---ANSGLVVAVNYFGVSALLDGLAEALSRGQQPAAVIVGSIAATQPGAAELPMVEAMLAGDEARAIELAEQQGQTH 150 (255)
T ss_dssp TTS---SCHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSTTGGGCHHHHHHHHTCHHHHHHHHHHHCCHH
T ss_pred Ccc---hhHHHHHHHHhHHHHHHHHHHHHHhhhcCCceEEEEeccccccccccccchhhhhcccchhhhhhhccccCCcc
Confidence 421 112222 223444433 24466899999999888643211 111 110 01245
Q ss_pred ChhHHHHHHHHHHHHHhhhh---cCCcEEEEEecceecCCCChHHHHHHhcCccc-ccccccCCcccccccHHHHHHHHH
Q 017914 187 TELGRLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRSSVDTIIKQLPLSE-GQKMRRARQYTSRIHVDDICQVLS 262 (364)
Q Consensus 187 ~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~v~Dva~~~~ 262 (364)
..|+.+|.+.|.+++.++++ .+++++++|||.++++... .+........ ..... + ....+++++|+|++++
T Consensus 151 ~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~pg~v~~~~~~---~~~~~~~~~~~~~~~~-~-~~~~~~~~~dva~~~~ 225 (255)
T 2dkn_A 151 LAYAGSKYAVTCLARRNVVDWAGRGVRLNVVAPGAVETPLLQ---ASKADPRYGESTRRFV-A-PLGRGSEPREVAEAIA 225 (255)
T ss_dssp HHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECCBCSHHHH---HHHHCTTTHHHHHSCC-C-TTSSCBCHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHhhcCcEEEEEcCCcccchhhh---hcccchhhHHHHHHHH-H-HhcCCCCHHHHHHHHH
Confidence 68999999999999988765 5899999999999986421 1111100000 00000 1 3457899999999999
Q ss_pred HHccCC---CCCceEEEeCCCCCCHHH
Q 017914 263 ASIDKP---SAWNVYNVVDDDPAPREE 286 (364)
Q Consensus 263 ~~l~~~---~~g~~~~i~~~~~~s~~e 286 (364)
.+++.+ ..|+.|++.+|..++++|
T Consensus 226 ~l~~~~~~~~~G~~~~v~gg~~~~~~e 252 (255)
T 2dkn_A 226 FLLGPQASFIHGSVLFVDGGMDALMRA 252 (255)
T ss_dssp HHHSGGGTTCCSCEEEESTTHHHHHCT
T ss_pred HHhCCCcccceeeEEEecCCeEeeeec
Confidence 999875 348899999886555443
|
| >1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.86 E-value=6.2e-21 Score=164.77 Aligned_cols=205 Identities=9% Similarity=-0.055 Sum_probs=140.9
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhh--CCceEEEccCChhhH--Hhhc---cCceeeEEE
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQ--SGFDVHLFNANETAL--MILT---TLKNYTHLL 128 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~--~~~~~~~~D~~~~~~--~~~~---~~d~v~~~~ 128 (364)
..+|+||||| +|+||++++++|+++|++|++++|+.++...+.. .+++++.+|++|.+. ..++ .+|+|+|++
T Consensus 5 ~~~~~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~A 84 (244)
T 1cyd_A 5 FSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPGIEPVCVDLGDWDATEKALGGIGPVDLLVNNA 84 (244)
T ss_dssp CTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTTCCCCSEEEECC
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCCCcEEecCCCHHHHHHHHHHcCCCCEEEECC
Confidence 4568999999 9999999999999999999999998766544332 367888999999764 3443 479999999
Q ss_pred EecCCCCCCC----ChhhhHHH------HHHHHhh----cCC-ccEEEEEccceeecCCCCccccCCCCCCCCChhHHHH
Q 017914 129 VSIPPLEGTG----DPMLKHGE------LLRSTLM----NGH-LQWLGYLSSTGVYGHSGGAWVDEDYPANPTTELGRLR 193 (364)
Q Consensus 129 ~~~~~~~~~~----~~~~~~~~------~l~~a~~----~~~-~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~~sK 193 (364)
+......... +....... ++..++. +.+ .++||++||...|.... +...|+.+|
T Consensus 85 g~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~-----------~~~~Y~~sK 153 (244)
T 1cyd_A 85 ALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVTFP-----------NLITYSSTK 153 (244)
T ss_dssp CCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCT-----------TBHHHHHHH
T ss_pred cccCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEEcchhhcCCCC-----------CcchhHHHH
Confidence 7543221111 11111112 2233332 234 57999999987664321 346899999
Q ss_pred HHHHHHHHHhhhh---cCCcEEEEEecceecCCCCh---HHHHHHhcCcccccccccCCcccccccHHHHHHHHHHHccC
Q 017914 194 LSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRSS---VDTIIKQLPLSEGQKMRRARQYTSRIHVDDICQVLSASIDK 267 (364)
Q Consensus 194 ~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~ 267 (364)
...|.+++.++.+ .+++++++|||.++++.... ...+... +..+...+++++++|+|++++.+++.
T Consensus 154 ~a~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~dva~~~~~l~~~ 225 (244)
T 1cyd_A 154 GAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGKKVSADPEFARK--------LKERHPLRKFAEVEDVVNSILFLLSD 225 (244)
T ss_dssp HHHHHHHHHHHHHHGGGTEEEEEEEECCBTTHHHHHHTCCHHHHHH--------HHHHSTTSSCBCHHHHHHHHHHHHSG
T ss_pred HHHHHHHHHHHHHhhhcCeEEEEEecCcccCccccccccCHHHHHH--------HHhcCCccCCCCHHHHHHHHHHHhCc
Confidence 9999999988765 58999999999998864210 0111110 00111235789999999999999976
Q ss_pred CC---CCceEEEeCCC
Q 017914 268 PS---AWNVYNVVDDD 280 (364)
Q Consensus 268 ~~---~g~~~~i~~~~ 280 (364)
+. .|+.+++.+|.
T Consensus 226 ~~~~~~G~~~~v~gG~ 241 (244)
T 1cyd_A 226 RSASTSGGGILVDAGY 241 (244)
T ss_dssp GGTTCCSSEEEESTTG
T ss_pred hhhcccCCEEEECCCc
Confidence 42 38899988774
|
| >1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=3.8e-21 Score=167.23 Aligned_cols=209 Identities=11% Similarity=-0.035 Sum_probs=143.8
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhh------hCCceEEEccCChhhH--Hhh-------cc
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELE------QSGFDVHLFNANETAL--MIL-------TT 120 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~------~~~~~~~~~D~~~~~~--~~~-------~~ 120 (364)
..+++||||| +|+||++++++|+++|++|++++|+.+....+. ..++.++.+|++|++. ..+ ..
T Consensus 9 ~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 88 (255)
T 1fmc_A 9 LDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKLGK 88 (255)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred CCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHhcCC
Confidence 4568999999 999999999999999999999999876544322 1357888999999763 333 27
Q ss_pred CceeeEEEEecCCCCC---CCChhhhHH------HHHHHHh----hcCCccEEEEEccceeecCCCCccccCCCCCCCCC
Q 017914 121 LKNYTHLLVSIPPLEG---TGDPMLKHG------ELLRSTL----MNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANPTT 187 (364)
Q Consensus 121 ~d~v~~~~~~~~~~~~---~~~~~~~~~------~~l~~a~----~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~ 187 (364)
+|.|+|+++....... ..+...... .++..++ ++.+.+++|++||...+... .+..
T Consensus 89 ~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~-----------~~~~ 157 (255)
T 1fmc_A 89 VDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKN-----------INMT 157 (255)
T ss_dssp CCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCC-----------TTCH
T ss_pred CCEEEECCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcCCC-----------CCCc
Confidence 8999999986543211 011111111 2233333 34467899999998765321 2457
Q ss_pred hhHHHHHHHHHHHHHhhhhc---CCcEEEEEecceecCCCC--hHHHHHHhcCcccccccccCCcccccccHHHHHHHHH
Q 017914 188 ELGRLRLSAEKGWLNLGRDL---GISAQVFRLGGIYGPGRS--SVDTIIKQLPLSEGQKMRRARQYTSRIHVDDICQVLS 262 (364)
Q Consensus 188 ~Y~~sK~~~E~~~~~~~~~~---~~~~~ilRp~~v~g~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~ 262 (364)
.|+.+|...|.+++.++.+. +++++++|||.++++... ....+.... . .+.....+++++|+|++++
T Consensus 158 ~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~--~------~~~~~~~~~~~~dva~~~~ 229 (255)
T 1fmc_A 158 SYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVITPEIEQKM--L------QHTPIRRLGQPQDIANAAL 229 (255)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCCHHHHHHH--H------HTCSSCSCBCHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHHHHhhhcCcEEEEEecccCcchhhhhccChHHHHHH--H------hcCCcccCCCHHHHHHHHH
Confidence 89999999999999887553 899999999999876311 111111110 0 0111234688999999999
Q ss_pred HHccCC---CCCceEEEeCCCCCCH
Q 017914 263 ASIDKP---SAWNVYNVVDDDPAPR 284 (364)
Q Consensus 263 ~~l~~~---~~g~~~~i~~~~~~s~ 284 (364)
.++... ..|++|++.+|..+|+
T Consensus 230 ~l~~~~~~~~~G~~~~v~gg~~~s~ 254 (255)
T 1fmc_A 230 FLCSPAASWVSGQILTVSGGGVQEL 254 (255)
T ss_dssp HHHSGGGTTCCSCEEEESTTSCCCC
T ss_pred HHhCCccccCCCcEEEECCceeccC
Confidence 999764 2488999999987765
|
| >4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A | Back alignment and structure |
|---|
Probab=99.85 E-value=1.2e-20 Score=164.34 Aligned_cols=216 Identities=13% Similarity=0.027 Sum_probs=144.9
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhh---CCceEEEccCChhhH--Hhh-------ccCce
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQ---SGFDVHLFNANETAL--MIL-------TTLKN 123 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~---~~~~~~~~D~~~~~~--~~~-------~~~d~ 123 (364)
..+++||||| +|+||++++++|+++|++|++++|+.+....+.. ..+.++.+|++|.+. ..+ ..+|+
T Consensus 6 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~ 85 (259)
T 4e6p_A 6 LEGKSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEIGPAAYAVQMDVTRQDSIDAAIAATVEHAGGLDI 85 (259)
T ss_dssp TTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHSSSCCE
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCceEEEeeCCCHHHHHHHHHHHHHHcCCCCE
Confidence 4568999999 9999999999999999999999998776554322 467889999999764 333 27899
Q ss_pred eeEEEEecCCCCCCC----ChhhhHHHH------HHHHhh----cCC-ccEEEEEccceeecCCCCccccCCCCCCCCCh
Q 017914 124 YTHLLVSIPPLEGTG----DPMLKHGEL------LRSTLM----NGH-LQWLGYLSSTGVYGHSGGAWVDEDYPANPTTE 188 (364)
Q Consensus 124 v~~~~~~~~~~~~~~----~~~~~~~~~------l~~a~~----~~~-~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~ 188 (364)
++|+++......... +.......| +..++. +.+ ..++|++||...+... .....
T Consensus 86 lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~~~~ 154 (259)
T 4e6p_A 86 LVNNAALFDLAPIVEITRESYEKLFAINVAGTLFTLQAAARQMIAQGRGGKIINMASQAGRRGE-----------ALVAI 154 (259)
T ss_dssp EEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCC-----------TTBHH
T ss_pred EEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEECChhhccCC-----------CCChH
Confidence 999998654322111 111111222 222222 222 4589999997654221 13468
Q ss_pred hHHHHHHHHHHHHHhhhhc---CCcEEEEEecceecCCCChHHHHHHh---cCcc-cccccccCCcccccccHHHHHHHH
Q 017914 189 LGRLRLSAEKGWLNLGRDL---GISAQVFRLGGIYGPGRSSVDTIIKQ---LPLS-EGQKMRRARQYTSRIHVDDICQVL 261 (364)
Q Consensus 189 Y~~sK~~~E~~~~~~~~~~---~~~~~ilRp~~v~g~~~~~~~~~~~~---~~~~-~~~~~~~~~~~~~~i~v~Dva~~~ 261 (364)
|+.+|...|.+.+.++.+. |+++++++||.++++.......+... .... .............+.+++|+|+++
T Consensus 155 Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~v 234 (259)
T 4e6p_A 155 YCATKAAVISLTQSAGLDLIKHRINVNAIAPGVVDGEHWDGVDALFARYENRPRGEKKRLVGEAVPFGRMGTAEDLTGMA 234 (259)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTHHHHHHHHHHHHTCCTTHHHHHHHHHSTTSSCBCTHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhhhcCCEEEEEEECCCccchhhhhhhhhhhhccCChHHHHHHHhccCCCCCCcCHHHHHHHH
Confidence 9999999999999987553 89999999999998763322111111 0000 001112223446679999999999
Q ss_pred HHHccCCC---CCceEEEeCCCCCC
Q 017914 262 SASIDKPS---AWNVYNVVDDDPAP 283 (364)
Q Consensus 262 ~~~l~~~~---~g~~~~i~~~~~~s 283 (364)
+.++.... .|++|++.+|..+|
T Consensus 235 ~~L~s~~~~~itG~~i~vdgG~~~s 259 (259)
T 4e6p_A 235 IFLASAESDYIVSQTYNVDGGNWMS 259 (259)
T ss_dssp HHTTSGGGTTCCSCEEEESTTSSCC
T ss_pred HHHhCCccCCCCCCEEEECcChhcC
Confidence 99887542 38999999987654
|
| >3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=4.4e-20 Score=161.21 Aligned_cols=216 Identities=9% Similarity=-0.079 Sum_probs=142.4
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhh-------hCCceEEEccCChhhH--Hhh-------c
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELE-------QSGFDVHLFNANETAL--MIL-------T 119 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~-------~~~~~~~~~D~~~~~~--~~~-------~ 119 (364)
..+++||||| +|+||++++++|+++|++|++++|+.++...+. ..++.++.+|++|.+. ..+ .
T Consensus 5 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g 84 (263)
T 3ai3_A 5 ISGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVAVDVATPEGVDAVVESVRSSFG 84 (263)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 3468999999 999999999999999999999999876544321 2357889999999763 222 3
Q ss_pred cCceeeEEEEecCCCCCCCCh----hhhHHH------HHHHH----hhcCCccEEEEEccceeecCCCCccccCCCCCCC
Q 017914 120 TLKNYTHLLVSIPPLEGTGDP----MLKHGE------LLRST----LMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANP 185 (364)
Q Consensus 120 ~~d~v~~~~~~~~~~~~~~~~----~~~~~~------~l~~a----~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~ 185 (364)
.+|+++|+++........... ...... ++..+ +++.+.+++|++||...+... .+
T Consensus 85 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~ 153 (263)
T 3ai3_A 85 GADILVNNAGTGSNETIMEAADEKWQFYWELLVMAAVRLARGLVPGMRARGGGAIIHNASICAVQPL-----------WY 153 (263)
T ss_dssp SCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC-----------TT
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhcCCC-----------CC
Confidence 789999999865432111111 111111 22222 234467899999998766432 13
Q ss_pred CChhHHHHHHHHHHHHHhhhh---cCCcEEEEEecceecCCCChH-HHHHHhcC--ccc-ccccccC-CcccccccHHHH
Q 017914 186 TTELGRLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRSSV-DTIIKQLP--LSE-GQKMRRA-RQYTSRIHVDDI 257 (364)
Q Consensus 186 ~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~-~~~~~~~~--~~~-~~~~~~~-~~~~~~i~v~Dv 257 (364)
...|+.+|...|.+.+.++.+ .|++++++|||.++++..... ..+..... ... ....... .....+++++|+
T Consensus 154 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dv 233 (263)
T 3ai3_A 154 EPIYNVTKAALMMFSKTLATEVIKDNIRVNCINPGLILTPDWIKTAKELTKDNGGDWKGYLQSVADEHAPIKRFASPEEL 233 (263)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHHHHHTTTTTCCHHHHHHHHHHHHCTTCSCBCHHHH
T ss_pred cchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCcchhhhhHhhhcccCCcHHHHHHHHHhcCCCCCCCcCHHHH
Confidence 468999999999999988755 589999999999988642111 10000000 000 0000000 122356899999
Q ss_pred HHHHHHHccCCC---CCceEEEeCCCCCC
Q 017914 258 CQVLSASIDKPS---AWNVYNVVDDDPAP 283 (364)
Q Consensus 258 a~~~~~~l~~~~---~g~~~~i~~~~~~s 283 (364)
|++++.++..+. .|+.|++.+|..++
T Consensus 234 A~~~~~l~s~~~~~~~G~~~~vdgG~~~s 262 (263)
T 3ai3_A 234 ANFFVFLCSERATYSVGSAYFVDGGMLKT 262 (263)
T ss_dssp HHHHHHHTSTTCTTCCSCEEEESTTCCCC
T ss_pred HHHHHHHcCccccCCCCcEEEECCCcccc
Confidence 999999997643 38999999887655
|
| >3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua} | Back alignment and structure |
|---|
Probab=99.85 E-value=9e-21 Score=158.91 Aligned_cols=179 Identities=8% Similarity=-0.045 Sum_probs=128.1
Q ss_pred CCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCChhhH--Hhhc---cCceeeEEEEecC
Q 017914 59 PNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETAL--MILT---TLKNYTHLLVSIP 132 (364)
Q Consensus 59 ~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~--~~~~---~~d~v~~~~~~~~ 132 (364)
+|+||||| +|+||++++++|+ +|++|++++|+.. .+.+|++|.+. ..++ .+|.|+|+++...
T Consensus 3 kM~vlVtGasg~iG~~~~~~l~-~g~~V~~~~r~~~-----------~~~~D~~~~~~~~~~~~~~~~~d~vi~~ag~~~ 70 (202)
T 3d7l_A 3 AMKILLIGASGTLGSAVKERLE-KKAEVITAGRHSG-----------DVTVDITNIDSIKKMYEQVGKVDAIVSATGSAT 70 (202)
T ss_dssp SCEEEEETTTSHHHHHHHHHHT-TTSEEEEEESSSS-----------SEECCTTCHHHHHHHHHHHCCEEEEEECCCCCC
T ss_pred CcEEEEEcCCcHHHHHHHHHHH-CCCeEEEEecCcc-----------ceeeecCCHHHHHHHHHHhCCCCEEEECCCCCC
Confidence 36899999 9999999999999 9999999999753 46799999764 3444 4899999998543
Q ss_pred CCCCCCChh----------hhHHHHHHHHhhcC--CccEEEEEccceeecCCCCccccCCCCCCCCChhHHHHHHHHHHH
Q 017914 133 PLEGTGDPM----------LKHGELLRSTLMNG--HLQWLGYLSSTGVYGHSGGAWVDEDYPANPTTELGRLRLSAEKGW 200 (364)
Q Consensus 133 ~~~~~~~~~----------~~~~~~l~~a~~~~--~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~~sK~~~E~~~ 200 (364)
......... .....++.+++... ..+++|++||...+.. ..+...|+.+|...|.++
T Consensus 71 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~~sS~~~~~~-----------~~~~~~Y~~sK~~~~~~~ 139 (202)
T 3d7l_A 71 FSPLTELTPEKNAVTISSKLGGQINLVLLGIDSLNDKGSFTLTTGIMMEDP-----------IVQGASAAMANGAVTAFA 139 (202)
T ss_dssp CCCGGGCCHHHHHHHHHTTTHHHHHHHHTTGGGEEEEEEEEEECCGGGTSC-----------CTTCHHHHHHHHHHHHHH
T ss_pred CCChhhCCHHHHHHHHhhccHHHHHHHHHHHHHhccCCEEEEEcchhhcCC-----------CCccHHHHHHHHHHHHHH
Confidence 221111111 11223455555433 1268999998754422 224468999999999999
Q ss_pred HHhhhh--cCCcEEEEEecceecCCCChHHHHHHhcCcccccccccCCcccccccHHHHHHHHHHHccCCCCCceEEE
Q 017914 201 LNLGRD--LGISAQVFRLGGIYGPGRSSVDTIIKQLPLSEGQKMRRARQYTSRIHVDDICQVLSASIDKPSAWNVYNV 276 (364)
Q Consensus 201 ~~~~~~--~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~~g~~~~i 276 (364)
+.++.+ .+++++++|||.++++... . +.....+++++++|+|++++.++.+...|++||+
T Consensus 140 ~~~~~e~~~gi~v~~v~pg~v~~~~~~----~------------~~~~~~~~~~~~~dva~~~~~~~~~~~~G~~~~v 201 (202)
T 3d7l_A 140 KSAAIEMPRGIRINTVSPNVLEESWDK----L------------EPFFEGFLPVPAAKVARAFEKSVFGAQTGESYQV 201 (202)
T ss_dssp HHHTTSCSTTCEEEEEEECCBGGGHHH----H------------GGGSTTCCCBCHHHHHHHHHHHHHSCCCSCEEEE
T ss_pred HHHHHHccCCeEEEEEecCccCCchhh----h------------hhhccccCCCCHHHHHHHHHHhhhccccCceEec
Confidence 998765 3899999999999876321 1 0111235679999999999998876667889987
|
| >1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.85 E-value=2.1e-20 Score=164.69 Aligned_cols=219 Identities=14% Similarity=0.027 Sum_probs=136.3
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhh---------hCCceEEEccCChhhH--Hhhc-----
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELE---------QSGFDVHLFNANETAL--MILT----- 119 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~---------~~~~~~~~~D~~~~~~--~~~~----- 119 (364)
..+++||||| +|+||++++++|+++|++|++++|+.++...+. ..++.++.+|++|.+. ..++
T Consensus 4 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 83 (278)
T 1spx_A 4 FAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLGK 83 (278)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcccCCCceeEEecccCCHHHHHHHHHHHHHH
Confidence 4568899999 999999999999999999999999876544321 1247789999999763 3332
Q ss_pred --cCceeeEEEEecCCCCCCCC----hhh----hHHH------HHHHHh----hcCCccEEEEEcccee-ecCCCCcccc
Q 017914 120 --TLKNYTHLLVSIPPLEGTGD----PML----KHGE------LLRSTL----MNGHLQWLGYLSSTGV-YGHSGGAWVD 178 (364)
Q Consensus 120 --~~d~v~~~~~~~~~~~~~~~----~~~----~~~~------~l~~a~----~~~~~~r~v~~Ss~~v-y~~~~~~~~~ 178 (364)
.+|+++|+++.......... ... .... ++..++ ++.+ +++|++||... +...
T Consensus 84 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-g~iv~isS~~~~~~~~------ 156 (278)
T 1spx_A 84 FGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTK-GEIVNISSIASGLHAT------ 156 (278)
T ss_dssp HSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCTTSSSSCC------
T ss_pred cCCCCEEEECCCCCCCcccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-CeEEEEecccccccCC------
Confidence 78999999976432111000 111 1112 222222 2334 79999999765 4221
Q ss_pred CCCCCCCCChhHHHHHHHHHHHHHhhhh---cCCcEEEEEecceecCCCChH----HHH------HHhcCcccccccccC
Q 017914 179 EDYPANPTTELGRLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRSSV----DTI------IKQLPLSEGQKMRRA 245 (364)
Q Consensus 179 E~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~----~~~------~~~~~~~~~~~~~~~ 245 (364)
.+...|+.+|...|.+.+.++.+ .|+++++|+||.+.++..... ... ... +.. .
T Consensus 157 -----~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~--~~~------~ 223 (278)
T 1spx_A 157 -----PDFPYYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMAT--MKE------C 223 (278)
T ss_dssp -----TTSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC--------------HHHHHH--HHH------H
T ss_pred -----CCccHHHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccCccccccccCchhhhhhhHHHHH--HHh------c
Confidence 13467999999999999887644 589999999999988752210 000 000 000 0
Q ss_pred CcccccccHHHHHHHHHHHccCC----CCCceEEEeCCCCCCHHHHHHHHHHHh
Q 017914 246 RQYTSRIHVDDICQVLSASIDKP----SAWNVYNVVDDDPAPREEVFAYAWDLV 295 (364)
Q Consensus 246 ~~~~~~i~v~Dva~~~~~~l~~~----~~g~~~~i~~~~~~s~~el~~~i~~~~ 295 (364)
.....+.+++|+|++++.++..+ -.|+.|++.+|..+++.|+++.+.+++
T Consensus 224 ~p~~~~~~~~dvA~~v~~l~s~~~~~~~tG~~~~vdgG~~~~~~~~~~~~~~~~ 277 (278)
T 1spx_A 224 VPAGVMGQPQDIAEVIAFLADRKTSSYIIGHQLVVDGGSSLIMGLHCQDFAKLL 277 (278)
T ss_dssp CTTSSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGGGC------------
T ss_pred CCCcCCCCHHHHHHHHHHHcCccccCcccCcEEEECCCcccccCcccccHHHHh
Confidence 01124689999999999988753 348999999998999999999888754
|
| >1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=2.9e-21 Score=172.28 Aligned_cols=223 Identities=8% Similarity=-0.042 Sum_probs=151.1
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhh-------hCCceEEEccCChhhH--Hhh-------c
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELE-------QSGFDVHLFNANETAL--MIL-------T 119 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~-------~~~~~~~~~D~~~~~~--~~~-------~ 119 (364)
..+++||||| +|+||++++++|+++|++|++++|+.++...+. ..++.++.+|++|.+. ..+ .
T Consensus 24 l~~k~vlITGasggiG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g 103 (302)
T 1w6u_A 24 FQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKVAG 103 (302)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCHHHHHHHHHHHHHHcC
Confidence 4568999999 999999999999999999999999876544321 2458899999999763 222 3
Q ss_pred cCceeeEEEEecCCCCC----CCChhhhHHHH------HHHHh----h-cCCccEEEEEccceeecCCCCccccCCCCCC
Q 017914 120 TLKNYTHLLVSIPPLEG----TGDPMLKHGEL------LRSTL----M-NGHLQWLGYLSSTGVYGHSGGAWVDEDYPAN 184 (364)
Q Consensus 120 ~~d~v~~~~~~~~~~~~----~~~~~~~~~~~------l~~a~----~-~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~ 184 (364)
.+|+++|+++....... ..+.......| +..++ . ..+.+++|++||...+... .
T Consensus 104 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~~~-----------~ 172 (302)
T 1w6u_A 104 HPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGS-----------G 172 (302)
T ss_dssp SCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHHCC-----------T
T ss_pred CCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCEEEEEcccccccCC-----------C
Confidence 56999999985432110 01111122222 22222 1 3355799999997655322 2
Q ss_pred CCChhHHHHHHHHHHHHHhhhh---cCCcEEEEEecceecCCC--ChHH--HHHHhcCcccccccccCCcccccccHHHH
Q 017914 185 PTTELGRLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGR--SSVD--TIIKQLPLSEGQKMRRARQYTSRIHVDDI 257 (364)
Q Consensus 185 ~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~--~~~~--~~~~~~~~~~~~~~~~~~~~~~~i~v~Dv 257 (364)
+...|+.+|.+.|.+++.++.+ .|++++++|||.++++.. .... ..... +. .......+++++|+
T Consensus 173 ~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~--~~------~~~p~~~~~~~~dv 244 (302)
T 1w6u_A 173 FVVPSASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRLDPTGTFEKE--MI------GRIPCGRLGTVEEL 244 (302)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC------CCTTSHHHHH--HH------TTCTTSSCBCHHHH
T ss_pred CcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeccCCCcchhhhcccchhhHHH--HH------hcCCcCCCCCHHHH
Confidence 4468999999999999998765 689999999999988631 1000 00000 00 00111246889999
Q ss_pred HHHHHHHccCCC---CCceEEEeCCCCCCHHHHHHHHHHHhcCC
Q 017914 258 CQVLSASIDKPS---AWNVYNVVDDDPAPREEVFAYAWDLVEKK 298 (364)
Q Consensus 258 a~~~~~~l~~~~---~g~~~~i~~~~~~s~~el~~~i~~~~g~~ 298 (364)
|++++.++.... .|++|++.+|..++++|+++.+.+..|..
T Consensus 245 a~~~~~l~~~~~~~~~G~~~~v~gg~~~~~~~~~~~~~~~~g~~ 288 (302)
T 1w6u_A 245 ANLAAFLCSDYASWINGAVIKFDGGEEVLISGEFNDLRKVTKEQ 288 (302)
T ss_dssp HHHHHHHTSGGGTTCCSCEEEESTTHHHHHHSTTGGGGGCCHHH
T ss_pred HHHHHHHcCCcccccCCCEEEECCCeeeccCCccccchhhcccc
Confidence 999999997542 48999999998888888887777766644
|
| >2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.85 E-value=4e-20 Score=161.59 Aligned_cols=212 Identities=12% Similarity=-0.013 Sum_probs=136.9
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhh-------------CCceEEEccCChhhH--Hhhc-
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQ-------------SGFDVHLFNANETAL--MILT- 119 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~-------------~~~~~~~~D~~~~~~--~~~~- 119 (364)
..+++||||| +|+||++++++|+++|++|++++|+.+....+.+ .++.++.+|++|.+. ..++
T Consensus 5 ~~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~ 84 (264)
T 2pd6_A 5 LRSALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAFQADVSEARAARCLLEQ 84 (264)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTC------------CCEEEECCTTSHHHHHHHHHH
T ss_pred cCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCccccccCcceEEEEecCCCHHHHHHHHHH
Confidence 4467999999 9999999999999999999999998766544321 357889999999763 3332
Q ss_pred ------cC-ceeeEEEEecCCCCCC----CChhhhHH------HHHHHHhh----cCC-ccEEEEEccceeecCCCCccc
Q 017914 120 ------TL-KNYTHLLVSIPPLEGT----GDPMLKHG------ELLRSTLM----NGH-LQWLGYLSSTGVYGHSGGAWV 177 (364)
Q Consensus 120 ------~~-d~v~~~~~~~~~~~~~----~~~~~~~~------~~l~~a~~----~~~-~~r~v~~Ss~~vy~~~~~~~~ 177 (364)
.+ |+|+|+++........ .+...... .++..++. +.+ .++||++||...+...
T Consensus 85 ~~~~~g~i~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~----- 159 (264)
T 2pd6_A 85 VQACFSRPPSVVVSCAGITQDEFLLHMSEDDWDKVIAVNLKGTFLVTQAAAQALVSNGCRGSIINISSIVGKVGN----- 159 (264)
T ss_dssp HHHHHSSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHHCC-----
T ss_pred HHHHhCCCCeEEEECCCcCCCcchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCceEEEECChhhccCC-----
Confidence 34 9999999765432100 11111111 23333332 223 5699999997543221
Q ss_pred cCCCCCCCCChhHHHHHHHHHHHHHhhhh---cCCcEEEEEecceecCCCChHH-HHHHhcCcccccccccCCccccccc
Q 017914 178 DEDYPANPTTELGRLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRSSVD-TIIKQLPLSEGQKMRRARQYTSRIH 253 (364)
Q Consensus 178 ~E~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~ 253 (364)
.+...|+.+|...|.+++.++.+ .|++++++|||.++++....+. .+.. .+.. ......+++
T Consensus 160 ------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~--~~~~------~~~~~~~~~ 225 (264)
T 2pd6_A 160 ------VGQTNYAASKAGVIGLTQTAARELGRHGIRCNSVLPGFIATPMTQKVPQKVVD--KITE------MIPMGHLGD 225 (264)
T ss_dssp ------TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSCC------------CTGG------GCTTCSCBC
T ss_pred ------CCChhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeecccccchhhcCHHHHH--HHHH------hCCCCCCCC
Confidence 13468999999999999888765 6899999999999988643211 1110 0100 111234688
Q ss_pred HHHHHHHHHHHccCC---CCCceEEEeCCCCCCHHHH
Q 017914 254 VDDICQVLSASIDKP---SAWNVYNVVDDDPAPREEV 287 (364)
Q Consensus 254 v~Dva~~~~~~l~~~---~~g~~~~i~~~~~~s~~el 287 (364)
++|+|++++.++... ..|+.+++.+|..+++...
T Consensus 226 ~~dva~~~~~l~~~~~~~~~G~~~~v~gg~~~~~~~~ 262 (264)
T 2pd6_A 226 PEDVADVVAFLASEDSGYITGTSVEVTGGLFMAENLY 262 (264)
T ss_dssp HHHHHHHHHHHHSGGGTTCCSCEEEESTTC-------
T ss_pred HHHHHHHHHHHcCCcccCCCCCEEEECCCceeccccC
Confidence 999999999998753 3489999998876655443
|
| >1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A | Back alignment and structure |
|---|
Probab=99.85 E-value=2.5e-20 Score=161.64 Aligned_cols=206 Identities=10% Similarity=-0.043 Sum_probs=140.3
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhh-----CCceEEEccCChhhH--Hhh-------ccC
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQ-----SGFDVHLFNANETAL--MIL-------TTL 121 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~-----~~~~~~~~D~~~~~~--~~~-------~~~ 121 (364)
..+++||||| +|+||++++++|+++|++|++++|+.+....+.. .++.++.+|++|.+. ..+ ..+
T Consensus 4 ~~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 83 (251)
T 1zk4_A 4 LDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAFGPV 83 (251)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSSC
T ss_pred CCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhccCceEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence 4568999999 9999999999999999999999998765443321 468899999999763 222 258
Q ss_pred ceeeEEEEecCCCCCCCCh----hhhHH----------HHHHHHhhcCCc-cEEEEEccceeecCCCCccccCCCCCCCC
Q 017914 122 KNYTHLLVSIPPLEGTGDP----MLKHG----------ELLRSTLMNGHL-QWLGYLSSTGVYGHSGGAWVDEDYPANPT 186 (364)
Q Consensus 122 d~v~~~~~~~~~~~~~~~~----~~~~~----------~~l~~a~~~~~~-~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~ 186 (364)
|.++|+++........... ..... +.++..+++.+. ++||++||...+... .+.
T Consensus 84 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~-----------~~~ 152 (251)
T 1zk4_A 84 STLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVGD-----------PSL 152 (251)
T ss_dssp CEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTSCC-----------TTC
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCCchhccCC-----------CCC
Confidence 9999999865332111111 11112 233444455666 799999997655322 134
Q ss_pred ChhHHHHHHHHHHHHHhhh-----hcCCcEEEEEecceecCCCChHH-HHHHhcCcccccccccCCcccccccHHHHHHH
Q 017914 187 TELGRLRLSAEKGWLNLGR-----DLGISAQVFRLGGIYGPGRSSVD-TIIKQLPLSEGQKMRRARQYTSRIHVDDICQV 260 (364)
Q Consensus 187 ~~Y~~sK~~~E~~~~~~~~-----~~~~~~~ilRp~~v~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~ 260 (364)
..|+.+|...|.+++.++. ..+++++++|||.++++....+. ..... .+. .......+++++|+|++
T Consensus 153 ~~Y~~sK~a~~~~~~~~a~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~-~~~------~~~~~~~~~~~~dva~~ 225 (251)
T 1zk4_A 153 GAYNASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDDLPGAEEAM-SQR------TKTPMGHIGEPNDIAYI 225 (251)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHHHHTSTTHHHHH-TST------TTCTTSSCBCHHHHHHH
T ss_pred ccchHHHHHHHHHHHHHHHHhcccCCCeEEEEEeeCcCcchhhhhcCchhhhH-HHh------hcCCCCCCcCHHHHHHH
Confidence 6899999999999988764 45899999999999876321110 00000 010 01112346899999999
Q ss_pred HHHHccCC---CCCceEEEeCCC
Q 017914 261 LSASIDKP---SAWNVYNVVDDD 280 (364)
Q Consensus 261 ~~~~l~~~---~~g~~~~i~~~~ 280 (364)
++.++... ..|+.|++.+|.
T Consensus 226 ~~~l~~~~~~~~~G~~~~v~gG~ 248 (251)
T 1zk4_A 226 CVYLASNESKFATGSEFVVDGGY 248 (251)
T ss_dssp HHHHHSGGGTTCCSCEEEESTTG
T ss_pred HHHHcCcccccccCcEEEECCCc
Confidence 99999764 248899998874
|
| >2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=99.85 E-value=7.3e-21 Score=160.08 Aligned_cols=186 Identities=11% Similarity=0.035 Sum_probs=134.2
Q ss_pred CeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhh-CCceEEEccCChhhH--Hhhc---cCceeeEEEEecC
Q 017914 60 NRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQ-SGFDVHLFNANETAL--MILT---TLKNYTHLLVSIP 132 (364)
Q Consensus 60 ~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~-~~~~~~~~D~~~~~~--~~~~---~~d~v~~~~~~~~ 132 (364)
|+||||| +|+||++++++|+++ +|++++|+.++...+.+ .+..++.+|++|++. ..++ .+|.|+|+++...
T Consensus 1 k~vlVtGasg~iG~~la~~l~~~--~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~ag~~~ 78 (207)
T 2yut_A 1 MRVLITGATGGLGGAFARALKGH--DLLLSGRRAGALAELAREVGARALPADLADELEAKALLEEAGPLDLLVHAVGKAG 78 (207)
T ss_dssp CEEEEETTTSHHHHHHHHHTTTS--EEEEECSCHHHHHHHHHHHTCEECCCCTTSHHHHHHHHHHHCSEEEEEECCCCCC
T ss_pred CEEEEEcCCcHHHHHHHHHHHhC--CEEEEECCHHHHHHHHHhccCcEEEeeCCCHHHHHHHHHhcCCCCEEEECCCcCC
Confidence 5799999 999999999999998 99999998766554321 112788899999774 4455 7999999997643
Q ss_pred CCC----CCCChhhhH------HHHHHHHhhcCCccEEEEEccceeecCCCCccccCCCCCCCCChhHHHHHHHHHHHHH
Q 017914 133 PLE----GTGDPMLKH------GELLRSTLMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANPTTELGRLRLSAEKGWLN 202 (364)
Q Consensus 133 ~~~----~~~~~~~~~------~~~l~~a~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~~sK~~~E~~~~~ 202 (364)
... ...+..... ..++..++...+.++||++||...|... .+...|+.+|...|.+++.
T Consensus 79 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~sS~~~~~~~-----------~~~~~Y~~sK~a~~~~~~~ 147 (207)
T 2yut_A 79 RASVREAGRDLVEEMLAAHLLTAAFVLKHARFQKGARAVFFGAYPRYVQV-----------PGFAAYAAAKGALEAYLEA 147 (207)
T ss_dssp CBCSCC---CHHHHHHHHHHHHHHHHHHHCCEEEEEEEEEECCCHHHHSS-----------TTBHHHHHHHHHHHHHHHH
T ss_pred CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHhcCCcEEEEEcChhhccCC-----------CCcchHHHHHHHHHHHHHH
Confidence 321 111111122 2345555556667899999998776432 2446899999999999998
Q ss_pred hhhh---cCCcEEEEEecceecCCCChHHHHHHhcCcccccccccCCcccccccHHHHHHHHHHHccCCCCCceEE
Q 017914 203 LGRD---LGISAQVFRLGGIYGPGRSSVDTIIKQLPLSEGQKMRRARQYTSRIHVDDICQVLSASIDKPSAWNVYN 275 (364)
Q Consensus 203 ~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~~g~~~~ 275 (364)
++.+ .|++++++|||.++++.. . +.+.....+++++|+|++++.+++++..+.+++
T Consensus 148 ~~~~~~~~gi~v~~v~pg~v~t~~~-------~----------~~~~~~~~~~~~~dva~~~~~~~~~~~~~~~~~ 206 (207)
T 2yut_A 148 ARKELLREGVHLVLVRLPAVATGLW-------A----------PLGGPPKGALSPEEAARKVLEGLFREPVPALLE 206 (207)
T ss_dssp HHHHHHTTTCEEEEECCCCBCSGGG-------G----------GGTSCCTTCBCHHHHHHHHHHHHC--CCCSCCC
T ss_pred HHHHHhhhCCEEEEEecCcccCCCc-------c----------ccCCCCCCCCCHHHHHHHHHHHHhCCCCccccc
Confidence 8765 589999999999987641 0 112234678999999999999999887766554
|
| >3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans} | Back alignment and structure |
|---|
Probab=99.84 E-value=1.9e-19 Score=156.85 Aligned_cols=207 Identities=8% Similarity=-0.041 Sum_probs=140.2
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhh----h--hCCceEEEccCChhhH--Hhh-------cc
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKEL----E--QSGFDVHLFNANETAL--MIL-------TT 120 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l----~--~~~~~~~~~D~~~~~~--~~~-------~~ 120 (364)
..+++||||| +|+||++++++|+++|++|++++|+.++...+ . ..++.++.+|++|.+. ..+ ..
T Consensus 11 l~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 90 (260)
T 3awd_A 11 LDNRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGHDVSSVVMDVTNTESVQNAVRSVHEQEGR 90 (260)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 4568999999 99999999999999999999999987654332 1 1357899999999763 333 36
Q ss_pred CceeeEEEEecCCCCCCCC-----hhhhHH------HHHHHHh----hcCCccEEEEEccceeecCCCCccccCCCCCCC
Q 017914 121 LKNYTHLLVSIPPLEGTGD-----PMLKHG------ELLRSTL----MNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANP 185 (364)
Q Consensus 121 ~d~v~~~~~~~~~~~~~~~-----~~~~~~------~~l~~a~----~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~ 185 (364)
+|.|+|+++.........+ ...... .++..++ +..+.+++|++||...+... +..+
T Consensus 91 id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~---------~~~~ 161 (260)
T 3awd_A 91 VDILVACAGICISEVKAEDMTDGQWLKQVDINLNGMFRSCQAVGRIMLEQKQGVIVAIGSMSGLIVN---------RPQQ 161 (260)
T ss_dssp CCEEEECCCCCCCSCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC---------SSSC
T ss_pred CCEEEECCCCCCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEecchhcccC---------CCCC
Confidence 8999999986541111111 111112 2233332 23456799999987543221 1123
Q ss_pred CChhHHHHHHHHHHHHHhhhh---cCCcEEEEEecceecCCCC-hH--HHHHHhcCcccccccccCCcccccccHHHHHH
Q 017914 186 TTELGRLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRS-SV--DTIIKQLPLSEGQKMRRARQYTSRIHVDDICQ 259 (364)
Q Consensus 186 ~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~ 259 (364)
...|+.+|...|.+++.++.+ .|++++++|||.++++... .. ..+... +.. ......+++++|+|+
T Consensus 162 ~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~--~~~------~~~~~~~~~~~dva~ 233 (260)
T 3awd_A 162 QAAYNASKAGVHQYIRSLAAEWAPHGIRANAVAPTYIETTLTRFGMEKPELYDA--WIA------GTPMGRVGQPDEVAS 233 (260)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTHHHHTCHHHHHH--HHH------TCTTSSCBCHHHHHH
T ss_pred ccccHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeeeeccchhhcccCChHHHHH--HHh------cCCcCCCCCHHHHHH
Confidence 478999999999999988765 6899999999999998643 11 111111 000 011234689999999
Q ss_pred HHHHHccCC---CCCceEEEeCCC
Q 017914 260 VLSASIDKP---SAWNVYNVVDDD 280 (364)
Q Consensus 260 ~~~~~l~~~---~~g~~~~i~~~~ 280 (364)
+++.++... ..|++|++.+|.
T Consensus 234 ~~~~l~~~~~~~~~G~~~~v~gg~ 257 (260)
T 3awd_A 234 VVQFLASDAASLMTGAIVNVDAGF 257 (260)
T ss_dssp HHHHHHSGGGTTCCSCEEEESTTT
T ss_pred HHHHHhCchhccCCCcEEEECCce
Confidence 999998753 348899998874
|
| >3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A* | Back alignment and structure |
|---|
Probab=99.84 E-value=1.5e-19 Score=156.10 Aligned_cols=201 Identities=8% Similarity=-0.039 Sum_probs=139.2
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhh--CCceEEEccCChhhH--Hhhc---cCceeeEEE
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQ--SGFDVHLFNANETAL--MILT---TLKNYTHLL 128 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~--~~~~~~~~D~~~~~~--~~~~---~~d~v~~~~ 128 (364)
..+++||||| +|+||++++++|+++|++|++++|+.++.+.+.. .+++++.+|++|.+. ..++ .+|.|+|++
T Consensus 5 l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~A 84 (244)
T 3d3w_A 5 LAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPGIEPVCVDLGDWEATERALGSVGPVDLLVNNA 84 (244)
T ss_dssp CTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTTCCCCCEEEECC
T ss_pred cCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCCCEEEEeCCCHHHHHHHHHHcCCCCEEEECC
Confidence 3467999999 9999999999999999999999998766554322 367888999999764 3343 579999998
Q ss_pred EecCCCCCCC----ChhhhHHHH------HHHHh----hcCC-ccEEEEEccceeecCCCCccccCCCCCCCCChhHHHH
Q 017914 129 VSIPPLEGTG----DPMLKHGEL------LRSTL----MNGH-LQWLGYLSSTGVYGHSGGAWVDEDYPANPTTELGRLR 193 (364)
Q Consensus 129 ~~~~~~~~~~----~~~~~~~~~------l~~a~----~~~~-~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~~sK 193 (364)
+......... +.......| +..++ .+.+ .+++|++||...+... .+...|+.+|
T Consensus 85 g~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~-----------~~~~~Y~~sK 153 (244)
T 3d3w_A 85 AVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRAV-----------TNHSVYCSTK 153 (244)
T ss_dssp CCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCC-----------TTBHHHHHHH
T ss_pred ccCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEeCchhhccCC-----------CCCchHHHHH
Confidence 7543211111 111111222 22222 2234 5799999997655321 2346899999
Q ss_pred HHHHHHHHHhhhh---cCCcEEEEEecceecCCCCh-------HHHHHHhcCcccccccccCCcccccccHHHHHHHHHH
Q 017914 194 LSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRSS-------VDTIIKQLPLSEGQKMRRARQYTSRIHVDDICQVLSA 263 (364)
Q Consensus 194 ~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~ 263 (364)
...|.+++.++.+ .+++++++|||.++++.... ...+.. ......+++++|+|++++.
T Consensus 154 ~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~dva~~~~~ 221 (244)
T 3d3w_A 154 GALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQATWSDPHKAKTMLN------------RIPLGKFAEVEHVVNAILF 221 (244)
T ss_dssp HHHHHHHHHHHHHHGGGTEEEEEEEECCBTTTTHHHHSCSTTHHHHHHH------------TCTTCSCBCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcccCeEEEEEEeccccccchhhhccChHHHHHHHh------------hCCCCCCcCHHHHHHHHHH
Confidence 9999999988755 48999999999998864211 011111 1122457899999999999
Q ss_pred HccCC---CCCceEEEeCCC
Q 017914 264 SIDKP---SAWNVYNVVDDD 280 (364)
Q Consensus 264 ~l~~~---~~g~~~~i~~~~ 280 (364)
++... ..|+.|++.+|.
T Consensus 222 l~~~~~~~~~G~~~~v~gG~ 241 (244)
T 3d3w_A 222 LLSDRSGMTTGSTLPVEGGF 241 (244)
T ss_dssp HHSGGGTTCCSCEEEESTTG
T ss_pred HcCccccCCCCCEEEECCCc
Confidence 99754 248899998874
|
| >3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans} | Back alignment and structure |
|---|
Probab=99.84 E-value=4.7e-20 Score=162.62 Aligned_cols=219 Identities=11% Similarity=-0.022 Sum_probs=154.0
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhh----hC-----CceEEEccCChhhH--Hhh------
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELE----QS-----GFDVHLFNANETAL--MIL------ 118 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~----~~-----~~~~~~~D~~~~~~--~~~------ 118 (364)
..+++||||| +|+||++++++|+++|++|++++|+.+...... .. .+.++.+|++|.+. ..+
T Consensus 9 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 88 (281)
T 3svt_A 9 FQDRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARAVDAVTAW 88 (281)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHHHHHHHHH
Confidence 4568999999 999999999999999999999999877654332 11 57889999999763 222
Q ss_pred -ccCceeeEEEEecCCCCCCCC-----hhhhHHHHHH------HHh----hcCCccEEEEEccceeecCCCCccccCCCC
Q 017914 119 -TTLKNYTHLLVSIPPLEGTGD-----PMLKHGELLR------STL----MNGHLQWLGYLSSTGVYGHSGGAWVDEDYP 182 (364)
Q Consensus 119 -~~~d~v~~~~~~~~~~~~~~~-----~~~~~~~~l~------~a~----~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~ 182 (364)
..+|+++|+++.........+ .......|+. .++ .+.+..++|++||...+...
T Consensus 89 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~---------- 158 (281)
T 3svt_A 89 HGRLHGVVHCAGGSENIGPITQVDSEAWRRTVDLNVNGTMYVLKHAAREMVRGGGGSFVGISSIAASNTH---------- 158 (281)
T ss_dssp HSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHSCC----------
T ss_pred cCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEeCHHHcCCC----------
Confidence 368999999986333222111 1112222332 222 23445699999998765322
Q ss_pred CCCCChhHHHHHHHHHHHHHhhhhc---CCcEEEEEecceecCCCChH-------HHHHHhcCcccccccccCCcccccc
Q 017914 183 ANPTTELGRLRLSAEKGWLNLGRDL---GISAQVFRLGGIYGPGRSSV-------DTIIKQLPLSEGQKMRRARQYTSRI 252 (364)
Q Consensus 183 ~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilRp~~v~g~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~i 252 (364)
.+...|+.+|...|.+.+.++.+. |+++++++||.+.++..... ..+.... ....+.
T Consensus 159 -~~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~------------p~~r~~ 225 (281)
T 3svt_A 159 -RWFGAYGVTKSAVDHLMQLAADELGASWVRVNSIRPGLIRTDLVAAITESAELSSDYAMCT------------PLPRQG 225 (281)
T ss_dssp -TTCTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTCHHHHHHHHHHC------------SSSSCB
T ss_pred -CCChhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchhhcccCHHHHHHHHhcC------------CCCCCC
Confidence 234689999999999999887553 69999999999987642211 1111111 123457
Q ss_pred cHHHHHHHHHHHccCCC---CCceEEEeCCCCCC-HHHHHHHHHHHhcCC
Q 017914 253 HVDDICQVLSASIDKPS---AWNVYNVVDDDPAP-REEVFAYAWDLVEKK 298 (364)
Q Consensus 253 ~v~Dva~~~~~~l~~~~---~g~~~~i~~~~~~s-~~el~~~i~~~~g~~ 298 (364)
+++|+|++++.++.... .|++|++.+|..++ ..|+.+.+.+.+|.+
T Consensus 226 ~~~dva~~~~~l~s~~~~~itG~~~~vdgG~~~~~~~~~~~~~~~~~~~~ 275 (281)
T 3svt_A 226 EVEDVANMAMFLLSDAASFVTGQVINVDGGQMLRRGPDFSAMLEPVFGRD 275 (281)
T ss_dssp CHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGSCCCCCHHHHHHHHCTT
T ss_pred CHHHHHHHHHHHhCcccCCCCCCEEEeCCChhcccCCcchhccccccCCc
Confidence 89999999999987643 48999999987766 778899999998876
|
| >2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A* | Back alignment and structure |
|---|
Probab=99.84 E-value=6.6e-20 Score=159.28 Aligned_cols=207 Identities=5% Similarity=-0.086 Sum_probs=139.4
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhh---CCc-eEEEccCChhhH--Hhh------ccCce
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQ---SGF-DVHLFNANETAL--MIL------TTLKN 123 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~---~~~-~~~~~D~~~~~~--~~~------~~~d~ 123 (364)
..+++||||| +|+||++++++|+++|++|++++|+.++.+.+.+ ..+ .++.+|++|.+. ..+ ..+|+
T Consensus 9 ~~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~id~ 88 (254)
T 2wsb_A 9 LDGACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQELGAAVAARIVADVTDAEAMTAAAAEAEAVAPVSI 88 (254)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEEECCTTCHHHHHHHHHHHHHHSCCCE
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcccceeEEEEecCCHHHHHHHHHHHHhhCCCcE
Confidence 4567999999 9999999999999999999999998766544321 245 788999999763 222 47899
Q ss_pred eeEEEEecCCCCCCCCh----hhhHHHH----------HHHHhhcCCccEEEEEccceeecCCCCccccCCCCCCCCChh
Q 017914 124 YTHLLVSIPPLEGTGDP----MLKHGEL----------LRSTLMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANPTTEL 189 (364)
Q Consensus 124 v~~~~~~~~~~~~~~~~----~~~~~~~----------l~~a~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y 189 (364)
++|+++........... ......| ++..+++.+.++||++||...+... +..+...|
T Consensus 89 li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~---------~~~~~~~Y 159 (254)
T 2wsb_A 89 LVNSAGIARLHDALETDDATWRQVMAVNVDGMFWASRAFGRAMVARGAGAIVNLGSMSGTIVN---------RPQFASSY 159 (254)
T ss_dssp EEECCCCCCCBCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC---------SSSCBHHH
T ss_pred EEECCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEecchhccCC---------CCCcchHH
Confidence 99999865432211111 1111122 2223334567899999997655321 11234689
Q ss_pred HHHHHHHHHHHHHhhhhc---CCcEEEEEecceecCCCChHH---HHHHhcCcccccccccCCcccccccHHHHHHHHHH
Q 017914 190 GRLRLSAEKGWLNLGRDL---GISAQVFRLGGIYGPGRSSVD---TIIKQLPLSEGQKMRRARQYTSRIHVDDICQVLSA 263 (364)
Q Consensus 190 ~~sK~~~E~~~~~~~~~~---~~~~~ilRp~~v~g~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~ 263 (364)
+.+|.+.|.+++.++.+. |++++++|||.++++...... .+... +.. ......+++++|+|++++.
T Consensus 160 ~~sK~a~~~~~~~~~~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~--~~~------~~~~~~~~~~~dva~~~~~ 231 (254)
T 2wsb_A 160 MASKGAVHQLTRALAAEWAGRGVRVNALAPGYVATEMTLKMRERPELFET--WLD------MTPMGRCGEPSEIAAAALF 231 (254)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSHHHHHHHTCHHHHHH--HHH------TSTTSSCBCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhhcCeEEEEEEecccCchhhhccccChHHHHH--HHh------cCCCCCCCCHHHHHHHHHH
Confidence 999999999998887553 899999999999886421110 11100 000 0112346899999999999
Q ss_pred HccCC---CCCceEEEeCCC
Q 017914 264 SIDKP---SAWNVYNVVDDD 280 (364)
Q Consensus 264 ~l~~~---~~g~~~~i~~~~ 280 (364)
++... ..|+.+++.+|.
T Consensus 232 l~~~~~~~~~G~~~~v~gG~ 251 (254)
T 2wsb_A 232 LASPAASYVTGAILAVDGGY 251 (254)
T ss_dssp HHSGGGTTCCSCEEEESTTG
T ss_pred HhCcccccccCCEEEECCCE
Confidence 98753 348899988763
|
| >3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.84 E-value=1.7e-19 Score=157.11 Aligned_cols=203 Identities=9% Similarity=0.037 Sum_probs=141.9
Q ss_pred CCCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCChhhH--Hhh-------ccCceee
Q 017914 56 WQSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETAL--MIL-------TTLKNYT 125 (364)
Q Consensus 56 ~~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~--~~~-------~~~d~v~ 125 (364)
...+++||||| +|+||++++++|+++|++|++++|+.+.... ..+.++.+|++|++. ..+ ..+|+++
T Consensus 25 ~~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~---~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv 101 (260)
T 3un1_A 25 RNQQKVVVITGASQGIGAGLVRAYRDRNYRVVATSRSIKPSAD---PDIHTVAGDISKPETADRIVREGIERFGRIDSLV 101 (260)
T ss_dssp HTTCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCCCCSS---TTEEEEESCTTSHHHHHHHHHHHHHHHSCCCEEE
T ss_pred CcCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhhccc---CceEEEEccCCCHHHHHHHHHHHHHHCCCCCEEE
Confidence 35568999999 9999999999999999999999998665432 468899999999764 222 3789999
Q ss_pred EEEEecCCCCCCC----ChhhhHHH------HHHHHh----hcCCccEEEEEccceeecCCCCccccCCCCCCCCChhHH
Q 017914 126 HLLVSIPPLEGTG----DPMLKHGE------LLRSTL----MNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANPTTELGR 191 (364)
Q Consensus 126 ~~~~~~~~~~~~~----~~~~~~~~------~l~~a~----~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~~ 191 (364)
|+|+......... +....... ++..++ ++.+..++|++||...+... +..+...|+.
T Consensus 102 ~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~---------~~~~~~~Y~~ 172 (260)
T 3un1_A 102 NNAGVFLAKPFVEMTQEDYDHNLGVNVAGFFHITQRAAAEMLKQGSGHIVSITTSLVDQPM---------VGMPSALASL 172 (260)
T ss_dssp ECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCTTTTSCB---------TTCCCHHHHH
T ss_pred ECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechhhccCC---------CCCccHHHHH
Confidence 9998654322111 11111122 233332 45667899999987654221 1224578999
Q ss_pred HHHHHHHHHHHhhhhc---CCcEEEEEecceecCCCCh--HHHHHHhcCcccccccccCCcccccccHHHHHHHHHHHcc
Q 017914 192 LRLSAEKGWLNLGRDL---GISAQVFRLGGIYGPGRSS--VDTIIKQLPLSEGQKMRRARQYTSRIHVDDICQVLSASID 266 (364)
Q Consensus 192 sK~~~E~~~~~~~~~~---~~~~~ilRp~~v~g~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~ 266 (364)
+|.+.+.+.+.++.+. |+++++++||.++++.... ...+... .....+.+++|+|++++.+.+
T Consensus 173 sKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~------------~p~~r~~~~~dva~av~~L~~ 240 (260)
T 3un1_A 173 TKGGLNAVTRSLAMEFSRSGVRVNAVSPGVIKTPMHPAETHSTLAGL------------HPVGRMGEIRDVVDAVLYLEH 240 (260)
T ss_dssp HHHHHHHHHHHHHHHTTTTTEEEEEEEECCBCCTTSCGGGHHHHHTT------------STTSSCBCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCcCCeEEEEEeecCCCCCCCCHHHHHHHhcc------------CCCCCCcCHHHHHHHHHHhcc
Confidence 9999999999988665 8999999999999876432 1111111 122345789999999998855
Q ss_pred CC-CCCceEEEeCCCCC
Q 017914 267 KP-SAWNVYNVVDDDPA 282 (364)
Q Consensus 267 ~~-~~g~~~~i~~~~~~ 282 (364)
.. -.|++|++.+|...
T Consensus 241 ~~~itG~~i~vdGG~~~ 257 (260)
T 3un1_A 241 AGFITGEILHVDGGQNA 257 (260)
T ss_dssp CTTCCSCEEEESTTGGG
T ss_pred cCCCCCcEEEECCCeec
Confidence 44 34899999888543
|
| >2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus} | Back alignment and structure |
|---|
Probab=99.84 E-value=1.1e-19 Score=157.53 Aligned_cols=203 Identities=7% Similarity=-0.082 Sum_probs=139.2
Q ss_pred CCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhh-------hCCceEEEccCChhhH--Hhh-------ccC
Q 017914 59 PNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELE-------QSGFDVHLFNANETAL--MIL-------TTL 121 (364)
Q Consensus 59 ~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~-------~~~~~~~~~D~~~~~~--~~~-------~~~ 121 (364)
+++||||| +|+||++++++|+++|++|++++|+.++...+. ..++.++.+|++|.+. ..+ ..+
T Consensus 2 ~k~vlItGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 81 (250)
T 2cfc_A 2 SRVAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYADKVLRVRADVADEGDVNAAIAATMEQFGAI 81 (250)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHSTTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCC
Confidence 57899999 999999999999999999999999876544321 1357889999999763 333 278
Q ss_pred ceeeEEEEecCCCCC--CC-----ChhhhHHHH----------HHHHhhcCCccEEEEEccceeecCCCCccccCCCCCC
Q 017914 122 KNYTHLLVSIPPLEG--TG-----DPMLKHGEL----------LRSTLMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPAN 184 (364)
Q Consensus 122 d~v~~~~~~~~~~~~--~~-----~~~~~~~~~----------l~~a~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~ 184 (364)
|+|+|+++....... .. +.......| ++..+++.+.+++|++||...+... .
T Consensus 82 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~-----------~ 150 (250)
T 2cfc_A 82 DVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFLGCRAVLPHMLLQGAGVIVNIASVASLVAF-----------P 150 (250)
T ss_dssp CEEEECCCCCCCTTCCSGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC-----------T
T ss_pred CEEEECCCCCCCCCcchhhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhhccCC-----------C
Confidence 999999976433210 11 111111222 2333334567899999997654321 2
Q ss_pred CCChhHHHHHHHHHHHHHhhhhc---CCcEEEEEecceecCCCCh-H--HHHHHhcCcccccccccCCcccccccHHHHH
Q 017914 185 PTTELGRLRLSAEKGWLNLGRDL---GISAQVFRLGGIYGPGRSS-V--DTIIKQLPLSEGQKMRRARQYTSRIHVDDIC 258 (364)
Q Consensus 185 ~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilRp~~v~g~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva 258 (364)
+...|+.+|...|.+++.++.+. |++++++|||.++++.... . ..+... +.. ......+.+.+|+|
T Consensus 151 ~~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~--~~~------~~~~~~~~~~~dva 222 (250)
T 2cfc_A 151 GRSAYTTSKGAVLQLTKSVAVDYAGSGIRCNAVCPGMIETPMTQWRLDQPELRDQ--VLA------RIPQKEIGTAAQVA 222 (250)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTTHHHHTSHHHHHH--HHT------TCTTCSCBCHHHHH
T ss_pred CchhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCccCccccccCCHHHHHH--HHh------cCCCCCCcCHHHHH
Confidence 34689999999999999887554 8999999999999986432 1 111111 000 01123468899999
Q ss_pred HHHHHHccCCC---CCceEEEeCCC
Q 017914 259 QVLSASIDKPS---AWNVYNVVDDD 280 (364)
Q Consensus 259 ~~~~~~l~~~~---~g~~~~i~~~~ 280 (364)
++++.++..+. .|+.+++.+|.
T Consensus 223 ~~~~~l~~~~~~~~~G~~~~v~gG~ 247 (250)
T 2cfc_A 223 DAVMFLAGEDATYVNGAALVMDGAY 247 (250)
T ss_dssp HHHHHHHSTTCTTCCSCEEEESTTG
T ss_pred HHHHHHcCchhhcccCCEEEECCce
Confidence 99999998652 38899998763
|
| >2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A* | Back alignment and structure |
|---|
Probab=99.83 E-value=6.6e-20 Score=158.65 Aligned_cols=205 Identities=12% Similarity=-0.038 Sum_probs=138.2
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhh-------hCCceEEEccCChhhH--Hhhc-------
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELE-------QSGFDVHLFNANETAL--MILT------- 119 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~-------~~~~~~~~~D~~~~~~--~~~~------- 119 (364)
..+++||||| +|+||++++++|+++|++|++++|+.++...+. ...+.++.+|++|.+. ..++
T Consensus 5 ~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 84 (248)
T 2pnf_A 5 LQGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGVKAHGVEMNLLSEESINKAFEEIYNLVD 84 (248)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHSS
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhcCCceEEEEccCCCHHHHHHHHHHHHHhcC
Confidence 3467899999 999999999999999999999999876544331 2357889999999764 3332
Q ss_pred cCceeeEEEEecCCCCCC----CChhhhHHHHHH----------HHhhcCCccEEEEEccceeecCCCCccccCCCCCCC
Q 017914 120 TLKNYTHLLVSIPPLEGT----GDPMLKHGELLR----------STLMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANP 185 (364)
Q Consensus 120 ~~d~v~~~~~~~~~~~~~----~~~~~~~~~~l~----------~a~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~ 185 (364)
.+|+|+|+++........ .+.......|+. ..+++.+.+++|++||...+... .+
T Consensus 85 ~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~-----------~~ 153 (248)
T 2pnf_A 85 GIDILVNNAGITRDKLFLRMSLLDWEEVLKVNLTGTFLVTQNSLRKMIKQRWGRIVNISSVVGFTGN-----------VG 153 (248)
T ss_dssp CCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHCHHHHHHTCEEEEEECCHHHHHCC-----------TT
T ss_pred CCCEEEECCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEccHHhcCCC-----------CC
Confidence 789999999764432100 111111222222 22334567899999997543221 13
Q ss_pred CChhHHHHHHHHHHHHHhhhh---cCCcEEEEEecceecCCCChHH-HHHHhcCcccccccccCCcccccccHHHHHHHH
Q 017914 186 TTELGRLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRSSVD-TIIKQLPLSEGQKMRRARQYTSRIHVDDICQVL 261 (364)
Q Consensus 186 ~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~ 261 (364)
...|+.+|...|.+++.++.+ .+++++++|||.++++....+. .+... +.. ......+++++|+|+++
T Consensus 154 ~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~--~~~------~~~~~~~~~~~dva~~~ 225 (248)
T 2pnf_A 154 QVNYSTTKAGLIGFTKSLAKELAPRNVLVNAVAPGFIETDMTAVLSEEIKQK--YKE------QIPLGRFGSPEEVANVV 225 (248)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGSCHHHHHH--HHH------TCTTSSCBCHHHHHHHH
T ss_pred CchHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeceecCchhhhccHHHHHH--HHh------cCCCCCccCHHHHHHHH
Confidence 368999999999999888654 4799999999999886532211 11111 000 00123468999999999
Q ss_pred HHHccCC---CCCceEEEeCCC
Q 017914 262 SASIDKP---SAWNVYNVVDDD 280 (364)
Q Consensus 262 ~~~l~~~---~~g~~~~i~~~~ 280 (364)
+.++... ..|++|++.+|.
T Consensus 226 ~~l~~~~~~~~~G~~~~v~gg~ 247 (248)
T 2pnf_A 226 LFLCSELASYITGEVIHVNGGM 247 (248)
T ss_dssp HHHHSGGGTTCCSCEEEESTTC
T ss_pred HHHhCchhhcCCCcEEEeCCCc
Confidence 9998753 348999998763
|
| >1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A* | Back alignment and structure |
|---|
Probab=99.83 E-value=3.4e-19 Score=155.20 Aligned_cols=202 Identities=8% Similarity=-0.067 Sum_probs=140.1
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhh---CCceEEEccCChhhH--Hhhc-------cCce
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQ---SGFDVHLFNANETAL--MILT-------TLKN 123 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~---~~~~~~~~D~~~~~~--~~~~-------~~d~ 123 (364)
..+++||||| +|+||++++++|+++|++|++++|+.++...+.. ..+.++.+|++|.+. ..++ .+|+
T Consensus 5 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD~ 84 (260)
T 1nff_A 5 LTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADAARYVHLDVTQPAQWKAAVDTAVTAFGGLHV 84 (260)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhcCceEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence 4568999999 9999999999999999999999998766544321 247789999999764 3333 7899
Q ss_pred eeEEEEecCCCCCCC----ChhhhHHH----------HHHHHhhcCCccEEEEEccceeecCCCCccccCCCCCCCCChh
Q 017914 124 YTHLLVSIPPLEGTG----DPMLKHGE----------LLRSTLMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANPTTEL 189 (364)
Q Consensus 124 v~~~~~~~~~~~~~~----~~~~~~~~----------~l~~a~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y 189 (364)
++|+++......... +....... .++..+++.+.+++|++||...+... .+...|
T Consensus 85 lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~~~~Y 153 (260)
T 1nff_A 85 LVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAGT-----------VACHGY 153 (260)
T ss_dssp EEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC-----------TTBHHH
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEeehhhcCCC-----------CCchhH
Confidence 999998654321111 11111122 23333444567899999998765321 133689
Q ss_pred HHHHHHHHHHHHHhhhh---cCCcEEEEEecceecCCCChHHHHHHhcCcccccccccCCcccccccHHHHHHHHHHHcc
Q 017914 190 GRLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRSSVDTIIKQLPLSEGQKMRRARQYTSRIHVDDICQVLSASID 266 (364)
Q Consensus 190 ~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~ 266 (364)
+.+|...|.+.+.++.+ .|++++++|||.++++.... ....+. ......+.+++|+|++++.++.
T Consensus 154 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~-----~~~~~~-------~~~~~~~~~~~dvA~~v~~l~s 221 (260)
T 1nff_A 154 TATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTPMTDW-----VPEDIF-------QTALGRAAEPVEVSNLVVYLAS 221 (260)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSGGGTT-----SCTTCS-------CCSSSSCBCHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHHHhCccCcEEEEEEeCCCCCCcccc-----chhhHH-------hCccCCCCCHHHHHHHHHHHhC
Confidence 99999999999888755 58999999999998864321 000000 0112346889999999999987
Q ss_pred CC---CCCceEEEeCCCC
Q 017914 267 KP---SAWNVYNVVDDDP 281 (364)
Q Consensus 267 ~~---~~g~~~~i~~~~~ 281 (364)
.. ..|+.|++.+|..
T Consensus 222 ~~~~~~~G~~~~v~gG~~ 239 (260)
T 1nff_A 222 DESSYSTGAEFVVDGGTV 239 (260)
T ss_dssp GGGTTCCSCEEEESTTGG
T ss_pred ccccCCcCCEEEECCCee
Confidence 54 2489999988753
|
| >3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=99.83 E-value=3.5e-19 Score=155.48 Aligned_cols=214 Identities=9% Similarity=-0.026 Sum_probs=139.1
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhh---CCceEEEccCChhhH--Hhhc-------cCce
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQ---SGFDVHLFNANETAL--MILT-------TLKN 123 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~---~~~~~~~~D~~~~~~--~~~~-------~~d~ 123 (364)
..+|+||||| +|+||++++++|+++|++|++++|+.++...+.. .++.++.+|++|.+. ..++ .+|+
T Consensus 10 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~~~g~iD~ 89 (263)
T 3ak4_A 10 LSGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLENGGFAVEVDVTKRASVDAAMQKAIDALGGFDL 89 (263)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCTTCCEEEECCTTCHHHHHHHHHHHHHHHTCCCE
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHHHHHHHcCCCCE
Confidence 4468999999 9999999999999999999999998766554322 267889999999763 3332 7899
Q ss_pred eeEEEEecCCCCCCC----ChhhhHHHH------HHHHh----hcCC-ccEEEEEccceeecCCCCccccCCCCCCCCCh
Q 017914 124 YTHLLVSIPPLEGTG----DPMLKHGEL------LRSTL----MNGH-LQWLGYLSSTGVYGHSGGAWVDEDYPANPTTE 188 (364)
Q Consensus 124 v~~~~~~~~~~~~~~----~~~~~~~~~------l~~a~----~~~~-~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~ 188 (364)
++|+++......... +.......| +..++ ...+ ..++|++||...+... .+...
T Consensus 90 lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~~~~ 158 (263)
T 3ak4_A 90 LCANAGVSTMRPAVDITDEEWDFNFDVNARGVFLANQIACRHFLASNTKGVIVNTASLAAKVGA-----------PLLAH 158 (263)
T ss_dssp EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCC-----------TTCHH
T ss_pred EEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEecccccccCC-----------CCchh
Confidence 999997643221111 111111122 22222 2334 5799999997654221 13468
Q ss_pred hHHHHHHHHHHHHHhhhh---cCCcEEEEEecceecCCCChHHHH---HHhcCccc-ccccccCCcccccccHHHHHHHH
Q 017914 189 LGRLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRSSVDTI---IKQLPLSE-GQKMRRARQYTSRIHVDDICQVL 261 (364)
Q Consensus 189 Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~---~~~~~~~~-~~~~~~~~~~~~~i~v~Dva~~~ 261 (364)
|+.+|...|.+.+.++.+ .|+++++||||.++++........ ........ ...+........+++++|+|+++
T Consensus 159 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~v 238 (263)
T 3ak4_A 159 YSASKFAVFGWTQALAREMAPKNIRVNCVCPGFVKTAMQEREIIWEAELRGMTPEAVRAEYVSLTPLGRIEEPEDVADVV 238 (263)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBTTHHHHHHHHHHHHHHTSCHHHHHHHHHHTCTTCSCBCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhHcCeEEEEEecccccChhhhhhccccccccccCcHHHHHHHHhcCCCCCCcCHHHHHHHH
Confidence 999999999999888754 489999999999987532111000 00000000 00000111223478999999999
Q ss_pred HHHccCC---CCCceEEEeCCCC
Q 017914 262 SASIDKP---SAWNVYNVVDDDP 281 (364)
Q Consensus 262 ~~~l~~~---~~g~~~~i~~~~~ 281 (364)
+.++... -.|++|++.+|..
T Consensus 239 ~~l~s~~~~~~tG~~~~vdgG~~ 261 (263)
T 3ak4_A 239 VFLASDAARFMTGQGINVTGGVR 261 (263)
T ss_dssp HHHHSGGGTTCCSCEEEESSSSS
T ss_pred HHHhCccccCCCCCEEEECcCEe
Confidence 9998764 3489999988754
|
| >2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A* | Back alignment and structure |
|---|
Probab=99.82 E-value=8.6e-20 Score=159.11 Aligned_cols=211 Identities=9% Similarity=-0.030 Sum_probs=141.5
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhh----hh--CCceEEEccCChhhH--Hhh-------cc
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKEL----EQ--SGFDVHLFNANETAL--MIL-------TT 120 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l----~~--~~~~~~~~D~~~~~~--~~~-------~~ 120 (364)
..+++||||| +|+||++++++|+++|++|++++|+.++...+ .. ..+.++.+|++|.+. ..+ ..
T Consensus 12 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 91 (260)
T 2zat_A 12 LENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGLSVTGTVCHVGKAEDRERLVAMAVNLHGG 91 (260)
T ss_dssp TTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 4568999999 99999999999999999999999987654432 11 357788999999663 222 37
Q ss_pred CceeeEEEEecCCCCCCCC-----hhhhHHHH------HHHH----hhcCCccEEEEEccceeecCCCCccccCCCCCCC
Q 017914 121 LKNYTHLLVSIPPLEGTGD-----PMLKHGEL------LRST----LMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANP 185 (364)
Q Consensus 121 ~d~v~~~~~~~~~~~~~~~-----~~~~~~~~------l~~a----~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~ 185 (364)
+|+++|+++.........+ .......| +..+ +++.+.+++|++||...|... .+
T Consensus 92 iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~ 160 (260)
T 2zat_A 92 VDILVSNAAVNPFFGNIIDATEEVWDKILHVNVKATVLMTKAVVPEMEKRGGGSVLIVSSVGAYHPF-----------PN 160 (260)
T ss_dssp CCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCC-----------TT
T ss_pred CCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEechhhcCCC-----------CC
Confidence 8999999975432111111 11111122 2222 335567899999998766322 23
Q ss_pred CChhHHHHHHHHHHHHHhhhh---cCCcEEEEEecceecCCCChHHHHHHhcCcccccccccCCcccccccHHHHHHHHH
Q 017914 186 TTELGRLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRSSVDTIIKQLPLSEGQKMRRARQYTSRIHVDDICQVLS 262 (364)
Q Consensus 186 ~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~ 262 (364)
...|+.+|...|.+.+.++.+ .|+++++++||.+.++..... +...... ...........+.+++|+|++++
T Consensus 161 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~--~~~~~~~---~~~~~~~~~~~~~~~~dva~~v~ 235 (260)
T 2zat_A 161 LGPYNVSKTALLGLTKNLAVELAPRNIRVNCLAPGLIKTNFSQVL--WMDKARK---EYMKESLRIRRLGNPEDCAGIVS 235 (260)
T ss_dssp BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSTTHHH--HSSHHHH---HHHHHHHTCSSCBCGGGGHHHHH
T ss_pred chhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECcccCccchhc--ccChHHH---HHHHhcCCCCCCCCHHHHHHHHH
Confidence 468999999999999988754 389999999999987642210 0000000 00000111234689999999999
Q ss_pred HHccCCC---CCceEEEeCCCCCC
Q 017914 263 ASIDKPS---AWNVYNVVDDDPAP 283 (364)
Q Consensus 263 ~~l~~~~---~g~~~~i~~~~~~s 283 (364)
.++..+. .|++|++.+|...+
T Consensus 236 ~l~s~~~~~~tG~~~~vdgG~~~s 259 (260)
T 2zat_A 236 FLCSEDASYITGETVVVGGGTASR 259 (260)
T ss_dssp HHTSGGGTTCCSCEEEESTTCCCC
T ss_pred HHcCcccCCccCCEEEECCCcccc
Confidence 9987642 48999999987765
|
| >1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A | Back alignment and structure |
|---|
Probab=99.82 E-value=1.6e-19 Score=157.98 Aligned_cols=208 Identities=12% Similarity=-0.003 Sum_probs=127.9
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhh------hCCceEEEccCChhhH--Hhh--------c
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELE------QSGFDVHLFNANETAL--MIL--------T 119 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~------~~~~~~~~~D~~~~~~--~~~--------~ 119 (364)
..+++||||| +|+||++++++|+++|++|++++|+.++...+. ..++.++.+|++|.+. ..+ .
T Consensus 12 l~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 91 (266)
T 1xq1_A 12 LKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMFGG 91 (266)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHTT
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHHhCC
Confidence 4568999999 999999999999999999999999876544321 1357889999999653 222 4
Q ss_pred cCceeeEEEEecCCCCCCC----ChhhhHH------HHHHHHh----hcCCccEEEEEccceeecCCCCccccCCCCCCC
Q 017914 120 TLKNYTHLLVSIPPLEGTG----DPMLKHG------ELLRSTL----MNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANP 185 (364)
Q Consensus 120 ~~d~v~~~~~~~~~~~~~~----~~~~~~~------~~l~~a~----~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~ 185 (364)
.+|+|+|+++......... +...... .++..++ ++.+.+++|++||...+... .+
T Consensus 92 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~-----------~~ 160 (266)
T 1xq1_A 92 KLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVSA-----------SV 160 (266)
T ss_dssp CCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC---------------------
T ss_pred CCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEccchhccCC-----------CC
Confidence 6899999997643221111 1111111 2333333 34567899999998765321 13
Q ss_pred CChhHHHHHHHHHHHHHhhhh---cCCcEEEEEecceecCCCChHHHHHHhcCcccccccccCCcccccccHHHHHHHHH
Q 017914 186 TTELGRLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRSSVDTIIKQLPLSEGQKMRRARQYTSRIHVDDICQVLS 262 (364)
Q Consensus 186 ~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~ 262 (364)
...|+.+|...|.+++.++.+ .|++++++|||.++++...... ...... ..........+++++|+|++++
T Consensus 161 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~---~~~~~~---~~~~~~~~~~~~~~~dva~~~~ 234 (266)
T 1xq1_A 161 GSIYSATKGALNQLARNLACEWASDGIRANAVAPAVIATPLAEAVY---DDEFKK---VVISRKPLGRFGEPEEVSSLVA 234 (266)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCSCC-------------------------------CCGGGGHHHHH
T ss_pred CchHHHHHHHHHHHHHHHHHHHhHhCcEEEEEeeCCCccchhhhhc---CHHHHH---HHHhcCCCCCCcCHHHHHHHHH
Confidence 468999999999999988755 4899999999999987532110 000000 0000011124688999999999
Q ss_pred HHccCC---CCCceEEEeCCCC
Q 017914 263 ASIDKP---SAWNVYNVVDDDP 281 (364)
Q Consensus 263 ~~l~~~---~~g~~~~i~~~~~ 281 (364)
.++... ..|+.|++.+|..
T Consensus 235 ~l~~~~~~~~~G~~~~v~gG~~ 256 (266)
T 1xq1_A 235 FLCMPAASYITGQTICVDGGLT 256 (266)
T ss_dssp HHTSGGGTTCCSCEEECCCCEE
T ss_pred HHcCccccCccCcEEEEcCCcc
Confidence 998753 2488999988743
|
| >3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A* | Back alignment and structure |
|---|
Probab=99.82 E-value=3e-20 Score=161.77 Aligned_cols=206 Identities=9% Similarity=-0.041 Sum_probs=137.5
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeC-chhhhhhh------hCCceEEEccCChhhH--Hhhc-------
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTN-VMKKKELE------QSGFDVHLFNANETAL--MILT------- 119 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~-~~~~~~l~------~~~~~~~~~D~~~~~~--~~~~------- 119 (364)
..+|+||||| +|+||++++++|+++|++|++++|+ .++...+. ..++.++.+|++|.+. ..++
T Consensus 5 l~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g 84 (258)
T 3afn_B 5 LKGKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADGGDAAFFAADLATSEACQQLVDEFVAKFG 84 (258)
T ss_dssp GTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEECCCchhhHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 3468999999 9999999999999999999999998 55543321 1357889999999763 3333
Q ss_pred cCceeeEEEEecCCCCCCCC-----hhhhHHHHHH------H----HhhcCC--c---cEEEEEccceeecCCCCccccC
Q 017914 120 TLKNYTHLLVSIPPLEGTGD-----PMLKHGELLR------S----TLMNGH--L---QWLGYLSSTGVYGHSGGAWVDE 179 (364)
Q Consensus 120 ~~d~v~~~~~~~~~~~~~~~-----~~~~~~~~l~------~----a~~~~~--~---~r~v~~Ss~~vy~~~~~~~~~E 179 (364)
.+|+|+|+++.........+ .......|+. . .+.+.+ . .++|++||...+..
T Consensus 85 ~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~-------- 156 (258)
T 3afn_B 85 GIDVLINNAGGLVGRKPLPEIDDTFYDAVMDANIRSVVMTTKFALPHLAAAAKASGQTSAVISTGSIAGHTG-------- 156 (258)
T ss_dssp SCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTSCEEEEEECCTHHHHC--------
T ss_pred CCCEEEECCCCcCCcCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcccCCCCCcEEEEecchhhccC--------
Confidence 78999999975222111111 1111122222 2 112222 2 68999999765531
Q ss_pred CCCCCCCChhHHHHHHHHHHHHHhhhhc---CCcEEEEEecceecCCCChH-HHHHHhcCcccccccccCCcccccccHH
Q 017914 180 DYPANPTTELGRLRLSAEKGWLNLGRDL---GISAQVFRLGGIYGPGRSSV-DTIIKQLPLSEGQKMRRARQYTSRIHVD 255 (364)
Q Consensus 180 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilRp~~v~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~v~ 255 (364)
+..+...|+.+|...|.+++.++.+. |++++++|||.++++..... ..+.... . .......+++++
T Consensus 157 --~~~~~~~Y~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~--~------~~~~~~~~~~~~ 226 (258)
T 3afn_B 157 --GGPGAGLYGAAKAFLHNVHKNWVDFHTKDGVRFNIVSPGTVDTAFHADKTQDVRDRI--S------NGIPMGRFGTAE 226 (258)
T ss_dssp --CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSGGGTTCCHHHHHHH--H------TTCTTCSCBCGG
T ss_pred --CCCCchHHHHHHHHHHHHHHHHHHhhcccCeEEEEEeCCCcccccccccCHHHHHHH--h------ccCCCCcCCCHH
Confidence 11245689999999999998886543 89999999999998753221 1111110 0 011224578999
Q ss_pred HHHHHHHHHccCC----CCCceEEEeCCC
Q 017914 256 DICQVLSASIDKP----SAWNVYNVVDDD 280 (364)
Q Consensus 256 Dva~~~~~~l~~~----~~g~~~~i~~~~ 280 (364)
|+|++++.++... ..|+.|++.+|.
T Consensus 227 dva~~~~~l~~~~~~~~~~G~~~~v~gg~ 255 (258)
T 3afn_B 227 EMAPAFLFFASHLASGYITGQVLDINGGQ 255 (258)
T ss_dssp GTHHHHHHHHCHHHHTTCCSEEEEESTTS
T ss_pred HHHHHHHHHhCcchhccccCCEEeECCCc
Confidence 9999999998753 248899998874
|
| >2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix} | Back alignment and structure |
|---|
Probab=99.82 E-value=3.5e-19 Score=155.20 Aligned_cols=210 Identities=11% Similarity=-0.028 Sum_probs=137.5
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhh-------C-CceEEEccCChhhH--Hhhc------
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQ-------S-GFDVHLFNANETAL--MILT------ 119 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~-------~-~~~~~~~D~~~~~~--~~~~------ 119 (364)
..+++||||| +|+||++++++|+++|++|++++|+.++...+.+ . ++.++.+|++|.+. ..++
T Consensus 5 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 84 (260)
T 2z1n_A 5 IQGKLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVSGAQVDIVAGDIREPGDIDRLFEKARDLG 84 (260)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHTT
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEEccCCCHHHHHHHHHHHHHhc
Confidence 3468999999 9999999999999999999999998765443221 2 67889999999764 2332
Q ss_pred cCceeeEEEEecCCCCCCC----ChhhhHH----------HHHHHHhhcCCccEEEEEccceeecCCCCccccCCCCCCC
Q 017914 120 TLKNYTHLLVSIPPLEGTG----DPMLKHG----------ELLRSTLMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANP 185 (364)
Q Consensus 120 ~~d~v~~~~~~~~~~~~~~----~~~~~~~----------~~l~~a~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~ 185 (364)
++|+++|+++......... +...... +.++..+++.+.+++|++||...+... .+
T Consensus 85 gid~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~ 153 (260)
T 2z1n_A 85 GADILVYSTGGPRPGRFMELGVEDWDESYRLLARSAVWVGRRAAEQMVEKGWGRMVYIGSVTLLRPW-----------QD 153 (260)
T ss_dssp CCSEEEECCCCCCCBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC-----------TT
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhhcCCC-----------CC
Confidence 4899999987543211001 1111111 223333345567899999998765322 13
Q ss_pred CChhHHHHHHHHHHHHHhhhh---cCCcEEEEEecceecCCCChH-H------HHHHhcCcccccccccCCcccccccHH
Q 017914 186 TTELGRLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRSSV-D------TIIKQLPLSEGQKMRRARQYTSRIHVD 255 (364)
Q Consensus 186 ~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~-~------~~~~~~~~~~~~~~~~~~~~~~~i~v~ 255 (364)
...|+.+|...+.+.+.++.+ .|+++++|+||.++++..... . .+....... .+........+.+++
T Consensus 154 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~p~~r~~~~~ 230 (260)
T 2z1n_A 154 LALSNIMRLPVIGVVRTLALELAPHGVTVNAVLPSLILTDRVRSLAEERARRSGITVEEALK---SMASRIPMGRVGKPE 230 (260)
T ss_dssp BHHHHHHTHHHHHHHHHHHHHHGGGTEEEEEEEECHHHHCCCC--------------------------CCTTSSCCCHH
T ss_pred CchhHHHHHHHHHHHHHHHHHHhhhCeEEEEEEECCcccchhhhhhhhhhcccCCcHHHHHH---HHHhcCCCCCccCHH
Confidence 468999999999999888654 389999999999988753310 0 000000000 000001112367899
Q ss_pred HHHHHHHHHccCC---CCCceEEEeCCC
Q 017914 256 DICQVLSASIDKP---SAWNVYNVVDDD 280 (364)
Q Consensus 256 Dva~~~~~~l~~~---~~g~~~~i~~~~ 280 (364)
|+|++++.++... -.|+.+++.+|.
T Consensus 231 dva~~v~~l~s~~~~~~tG~~i~vdGG~ 258 (260)
T 2z1n_A 231 ELASVVAFLASEKASFITGAVIPVDGGA 258 (260)
T ss_dssp HHHHHHHHHTSGGGTTCCSCEEEESTTT
T ss_pred HHHHHHHHHhCccccCCCCCEEEeCCCc
Confidence 9999999999753 348899988763
|
| >1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.82 E-value=1.3e-19 Score=159.10 Aligned_cols=209 Identities=11% Similarity=-0.038 Sum_probs=136.8
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEe-Cchhhhhh----h--hCCceEEEccCChhhH--Hhhc-------
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCT-NVMKKKEL----E--QSGFDVHLFNANETAL--MILT------- 119 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r-~~~~~~~l----~--~~~~~~~~~D~~~~~~--~~~~------- 119 (364)
..+++||||| +|+||++++++|+++|++|++++| +.+....+ . ..++.++.+|++|.+. ..++
T Consensus 19 ~~~k~vlItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 98 (274)
T 1ja9_A 19 LAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSHFG 98 (274)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcC
Confidence 4568999999 999999999999999999999999 55443322 1 2357789999999763 3333
Q ss_pred cCceeeEEEEecCCCCCCC----ChhhhHHH------HHHHHhhc---CCccEEEEEccceee-cCCCCccccCCCCCCC
Q 017914 120 TLKNYTHLLVSIPPLEGTG----DPMLKHGE------LLRSTLMN---GHLQWLGYLSSTGVY-GHSGGAWVDEDYPANP 185 (364)
Q Consensus 120 ~~d~v~~~~~~~~~~~~~~----~~~~~~~~------~l~~a~~~---~~~~r~v~~Ss~~vy-~~~~~~~~~E~~~~~~ 185 (364)
.+|.|+|+++......... +....... ++..++.. .+ ++||++||...+ ... .+
T Consensus 99 ~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~iv~~sS~~~~~~~~-----------~~ 166 (274)
T 1ja9_A 99 GLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRG-GRIILTSSIAAVMTGI-----------PN 166 (274)
T ss_dssp CEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEE-EEEEEECCGGGTCCSC-----------CS
T ss_pred CCCEEEECCCCCCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhC-CEEEEEcChHhccCCC-----------CC
Confidence 7899999987643221101 11111222 33332221 23 699999998765 221 13
Q ss_pred CChhHHHHHHHHHHHHHhhhhc---CCcEEEEEecceecCCCChHHHHHHhc------Ccc--c-ccccccCCccccccc
Q 017914 186 TTELGRLRLSAEKGWLNLGRDL---GISAQVFRLGGIYGPGRSSVDTIIKQL------PLS--E-GQKMRRARQYTSRIH 253 (364)
Q Consensus 186 ~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilRp~~v~g~~~~~~~~~~~~~------~~~--~-~~~~~~~~~~~~~i~ 253 (364)
...|+.+|...|.+++.++.+. +++++++|||.++++... ...... ... . ......+.....+++
T Consensus 167 ~~~Y~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (274)
T 1ja9_A 167 HALYAGSKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFD---ENSWHYAPGGYKGMPQEKIDEGLANMNPLKRIGY 243 (274)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHH---HHGGGTSTTCCTTCCHHHHHHHHHHTSTTSSCBC
T ss_pred CchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccccchh---cccccccccccccCchHHHHHHHHhcCCCCCccC
Confidence 4679999999999999887653 899999999999765311 000000 000 0 000111223456799
Q ss_pred HHHHHHHHHHHccCCC---CCceEEEeCCC
Q 017914 254 VDDICQVLSASIDKPS---AWNVYNVVDDD 280 (364)
Q Consensus 254 v~Dva~~~~~~l~~~~---~g~~~~i~~~~ 280 (364)
++|+|++++.++..+. .|++|++.+|.
T Consensus 244 ~~dva~~i~~l~~~~~~~~~G~~~~v~gG~ 273 (274)
T 1ja9_A 244 PADIGRAVSALCQEESEWINGQVIKLTGGG 273 (274)
T ss_dssp HHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred HHHHHHHHHHHhCcccccccCcEEEecCCc
Confidence 9999999999997642 48999998763
|
| >3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.82 E-value=6.9e-19 Score=155.15 Aligned_cols=216 Identities=12% Similarity=-0.027 Sum_probs=141.2
Q ss_pred CCCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCch------------hhhh----hh--hCCceEEEccCChhhH-
Q 017914 56 WQSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVM------------KKKE----LE--QSGFDVHLFNANETAL- 115 (364)
Q Consensus 56 ~~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~------------~~~~----l~--~~~~~~~~~D~~~~~~- 115 (364)
...++++|||| +|+||++++++|+++|++|++++|+.. .... +. ...+.++.+|++|.+.
T Consensus 7 ~l~~k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v 86 (281)
T 3s55_A 7 DFEGKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKTGRRCISAKVDVKDRAAL 86 (281)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHH
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHH
Confidence 45678999999 999999999999999999999999632 2111 11 1457889999999763
Q ss_pred -Hhh-------ccCceeeEEEEecCCCCCCCCh----hhhHHHH------HHHH----hhcCCccEEEEEccceeecCCC
Q 017914 116 -MIL-------TTLKNYTHLLVSIPPLEGTGDP----MLKHGEL------LRST----LMNGHLQWLGYLSSTGVYGHSG 173 (364)
Q Consensus 116 -~~~-------~~~d~v~~~~~~~~~~~~~~~~----~~~~~~~------l~~a----~~~~~~~r~v~~Ss~~vy~~~~ 173 (364)
..+ ..+|+++|+++........... ......| +..+ +.+.+..++|++||...+...
T Consensus 87 ~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~- 165 (281)
T 3s55_A 87 ESFVAEAEDTLGGIDIAITNAGISTIALLPEVESAQWDEVIGTNLTGTFNTIAAVAPGMIKRNYGRIVTVSSMLGHSAN- 165 (281)
T ss_dssp HHHHHHHHHHHTCCCEEEECCCCCCCCCTTCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSCC-
T ss_pred HHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhcCCC-
Confidence 222 3789999999865432211111 1111222 2222 234456799999997655321
Q ss_pred CccccCCCCCCCCChhHHHHHHHHHHHHHhhhh---cCCcEEEEEecceecCCCChHHH---HHHhcCcccc----cc-c
Q 017914 174 GAWVDEDYPANPTTELGRLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRSSVDT---IIKQLPLSEG----QK-M 242 (364)
Q Consensus 174 ~~~~~E~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~---~~~~~~~~~~----~~-~ 242 (364)
.+...|+.+|...+.+.+.++.+ .|+++++++||.++++....... +......... .. .
T Consensus 166 ----------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (281)
T 3s55_A 166 ----------FAQASYVSSKWGVIGLTKCAAHDLVGYGITVNAVAPGNIETPMTHNDFVFGTMRPDLEKPTLKDVESVFA 235 (281)
T ss_dssp ----------TTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSTTTSSHHHHHC-------CCHHHHHHHHH
T ss_pred ----------CCCchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCccccchhhhccccccccccchhHHHHHHH
Confidence 23468999999999999988764 58999999999999876432100 0000000000 00 0
Q ss_pred ccCCcccccccHHHHHHHHHHHccCCC---CCceEEEeCCCCC
Q 017914 243 RRARQYTSRIHVDDICQVLSASIDKPS---AWNVYNVVDDDPA 282 (364)
Q Consensus 243 ~~~~~~~~~i~v~Dva~~~~~~l~~~~---~g~~~~i~~~~~~ 282 (364)
....+...+.+++|+|++++.++.... .|+++++.+|...
T Consensus 236 ~~~~~~~~~~~p~dvA~~v~~L~s~~~~~itG~~i~vdgG~~~ 278 (281)
T 3s55_A 236 SLHLQYAPFLKPEEVTRAVLFLVDEASSHITGTVLPIDAGATA 278 (281)
T ss_dssp HHCSSSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred hhhccCcCCCCHHHHHHHHHHHcCCcccCCCCCEEEECCCccc
Confidence 111223567999999999999998653 3899999888644
|
| >3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.82 E-value=1.8e-19 Score=159.38 Aligned_cols=227 Identities=11% Similarity=-0.084 Sum_probs=143.4
Q ss_pred CCCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeC------------chhhhhh----h--hCCceEEEccCChhhH-
Q 017914 56 WQSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTN------------VMKKKEL----E--QSGFDVHLFNANETAL- 115 (364)
Q Consensus 56 ~~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~------------~~~~~~l----~--~~~~~~~~~D~~~~~~- 115 (364)
...+++||||| +|+||++++++|+++|++|++++|+ .+..... . ..++.++.+|++|.+.
T Consensus 7 ~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v 86 (287)
T 3pxx_A 7 RVQDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDVRDRAAV 86 (287)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHH
T ss_pred ccCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccCCCHHHH
Confidence 45678999999 9999999999999999999999987 2222211 1 1467889999999763
Q ss_pred -Hhh-------ccCceeeEEEEecCCCCC--CCChhhhHHHH------HHHHhhc--CCccEEEEEccceeecCCCCccc
Q 017914 116 -MIL-------TTLKNYTHLLVSIPPLEG--TGDPMLKHGEL------LRSTLMN--GHLQWLGYLSSTGVYGHSGGAWV 177 (364)
Q Consensus 116 -~~~-------~~~d~v~~~~~~~~~~~~--~~~~~~~~~~~------l~~a~~~--~~~~r~v~~Ss~~vy~~~~~~~~ 177 (364)
..+ ..+|+++|+++....... ..+.......| +..++.. .+..++|++||...+......+.
T Consensus 87 ~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~ 166 (287)
T 3pxx_A 87 SRELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLTSGASIITTGSVAGLIAAAQPPG 166 (287)
T ss_dssp HHHHHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCHHHHHHHHCCC-
T ss_pred HHHHHHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcEEEEeccchhccccccccc
Confidence 222 378999999987544311 11112222233 3333322 23458999999765543222222
Q ss_pred cCCCCCCCCChhHHHHHHHHHHHHHhhhhc---CCcEEEEEecceecCCCChHHHHHHhcCc-cccc-------ccccCC
Q 017914 178 DEDYPANPTTELGRLRLSAEKGWLNLGRDL---GISAQVFRLGGIYGPGRSSVDTIIKQLPL-SEGQ-------KMRRAR 246 (364)
Q Consensus 178 ~E~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilRp~~v~g~~~~~~~~~~~~~~~-~~~~-------~~~~~~ 246 (364)
.+..+..+...|+.+|...+.+.+.++.+. |+++++|+||.+.++.............. .... ......
T Consensus 167 ~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (287)
T 3pxx_A 167 AGGPQGPGGAGYSYAKQLVDSYTLQLAAQLAPQSIRANVIHPTNVNTDMLNSAPMYRQFRPDLEAPSRADALLAFPAMQA 246 (287)
T ss_dssp ----CHHHHHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEESSBSSTTTSSHHHHHHHCTTSSSCCHHHHHHHGGGGCS
T ss_pred ccccCCCccchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCccccccccccchhhhhccccccchhHHHHhhhhhhcc
Confidence 333333344679999999999999887654 89999999999988764322111111000 0000 000111
Q ss_pred cccccccHHHHHHHHHHHccCC---CCCceEEEeCCCCC
Q 017914 247 QYTSRIHVDDICQVLSASIDKP---SAWNVYNVVDDDPA 282 (364)
Q Consensus 247 ~~~~~i~v~Dva~~~~~~l~~~---~~g~~~~i~~~~~~ 282 (364)
....+.+++|+|++++.++... -.|+++++.+|..+
T Consensus 247 ~~~~~~~p~dva~~v~fL~s~~a~~itG~~i~vdGG~~~ 285 (287)
T 3pxx_A 247 MPTPYVEASDISNAVCFLASDESRYVTGLQFKVDAGAML 285 (287)
T ss_dssp SSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred cCCCCCCHHHHHhhHheecchhhcCCCCceEeECchhhh
Confidence 1256789999999999998754 34899999888543
|
| >1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A* | Back alignment and structure |
|---|
Probab=99.82 E-value=9.3e-19 Score=151.95 Aligned_cols=207 Identities=8% Similarity=-0.098 Sum_probs=139.4
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhh---CCceEEEccCChhhH--Hhh-------ccCce
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQ---SGFDVHLFNANETAL--MIL-------TTLKN 123 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~---~~~~~~~~D~~~~~~--~~~-------~~~d~ 123 (364)
..+|+||||| +|+||++++++|+++|++|++++|+.++...+.. .++.++.+|++|.+. ..+ ..+|.
T Consensus 3 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~ 82 (254)
T 1hdc_A 3 LSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELGDAARYQHLDVTIEEDWQRVVAYAREEFGSVDG 82 (254)
T ss_dssp CCCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence 3468999999 9999999999999999999999998766554322 357788999999763 222 27899
Q ss_pred eeEEEEecCCCCCCC----ChhhhHHH----------HHHHHhhcCCccEEEEEccceeecCCCCccccCCCCCCCCChh
Q 017914 124 YTHLLVSIPPLEGTG----DPMLKHGE----------LLRSTLMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANPTTEL 189 (364)
Q Consensus 124 v~~~~~~~~~~~~~~----~~~~~~~~----------~l~~a~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y 189 (364)
++|+++......... +....... .++..+++.+.+++|++||...+... .+...|
T Consensus 83 lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~~~~Y 151 (254)
T 1hdc_A 83 LVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLMGL-----------ALTSSY 151 (254)
T ss_dssp EEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC-----------TTCHHH
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhccCC-----------CCchhH
Confidence 999987643211001 11111122 33444445567899999997654321 234689
Q ss_pred HHHHHHHHHHHHHhhhh---cCCcEEEEEecceecCCCChHHHHHHhcCcccccccccCCcccccc-cHHHHHHHHHHHc
Q 017914 190 GRLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRSSVDTIIKQLPLSEGQKMRRARQYTSRI-HVDDICQVLSASI 265 (364)
Q Consensus 190 ~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i-~v~Dva~~~~~~l 265 (364)
+.+|...+.+.+.++.+ .|+++++++||.++++.. ..+ .. ... ...........+. +++|+|++++.++
T Consensus 152 ~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~---~~~-~~-~~~--~~~~~~~p~~~~~~~~~dvA~~v~~l~ 224 (254)
T 1hdc_A 152 GASKWGVRGLSKLAAVELGTDRIRVNSVHPGMTYTPMT---AET-GI-RQG--EGNYPNTPMGRVGNEPGEIAGAVVKLL 224 (254)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHH---HHH-TC-CCS--TTSCTTSTTSSCB-CHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhhcCeEEEEEecccCcCccc---ccc-ch-hHH--HHHHhcCCCCCCCCCHHHHHHHHHHHh
Confidence 99999999999888754 489999999999987531 111 11 000 0000011112357 8999999999998
Q ss_pred cCC---CCCceEEEeCCCC
Q 017914 266 DKP---SAWNVYNVVDDDP 281 (364)
Q Consensus 266 ~~~---~~g~~~~i~~~~~ 281 (364)
... -.|+.+++.+|..
T Consensus 225 s~~~~~~tG~~~~vdgG~~ 243 (254)
T 1hdc_A 225 SDTSSYVTGAELAVDGGWT 243 (254)
T ss_dssp SGGGTTCCSCEEEESTTTT
T ss_pred CchhcCCCCCEEEECCCcc
Confidence 764 3489999988753
|
| >3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.82 E-value=4e-19 Score=153.83 Aligned_cols=207 Identities=12% Similarity=0.003 Sum_probs=136.8
Q ss_pred CCCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhh---CCceEEEccCChhhH--Hhh---ccCceeeE
Q 017914 56 WQSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQ---SGFDVHLFNANETAL--MIL---TTLKNYTH 126 (364)
Q Consensus 56 ~~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~---~~~~~~~~D~~~~~~--~~~---~~~d~v~~ 126 (364)
...+++||||| +|+||+++++.|+++|++|++++|+.++...+.+ ..+.++.+|+++.+. ..+ ..+|+++|
T Consensus 11 ~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~li~ 90 (249)
T 3f9i_A 11 DLTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNALKDNYTIEVCNLANKEECSNLISKTSNLDILVC 90 (249)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCSSEEEEECCTTSHHHHHHHHHTCSCCSEEEE
T ss_pred cCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhccCccEEEcCCCCHHHHHHHHHhcCCCCEEEE
Confidence 45678999999 9999999999999999999999998876555432 467889999999764 333 36899999
Q ss_pred EEEecCCCC----CCCChhhhHHHH------HHHH----hhcCCccEEEEEccceeecCCCCccccCCCCCCCCChhHHH
Q 017914 127 LLVSIPPLE----GTGDPMLKHGEL------LRST----LMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANPTTELGRL 192 (364)
Q Consensus 127 ~~~~~~~~~----~~~~~~~~~~~~------l~~a----~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~~s 192 (364)
+++...... ...+.......| +..+ +.+.+..++|++||...+... .+...|+.+
T Consensus 91 ~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~~~~Y~~s 159 (249)
T 3f9i_A 91 NAGITSDTLAIRMKDQDFDKVIDINLKANFILNREAIKKMIQKRYGRIINISSIVGIAGN-----------PGQANYCAS 159 (249)
T ss_dssp CCC-------------CHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCC--CC-----------SCSHHHHHH
T ss_pred CCCCCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEEccHHhccCC-----------CCCchhHHH
Confidence 998654321 112222222222 2222 233456799999997665322 234689999
Q ss_pred HHHHHHHHHHhhhh---cCCcEEEEEecceecCCCChH-HHHHHhcCcccccccccCCcccccccHHHHHHHHHHHccCC
Q 017914 193 RLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRSSV-DTIIKQLPLSEGQKMRRARQYTSRIHVDDICQVLSASIDKP 268 (364)
Q Consensus 193 K~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~ 268 (364)
|.+.+.+++.++.+ .|+++++++||.+.++....+ ...... .........+.+++|+|++++.++...
T Consensus 160 K~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~--------~~~~~~~~~~~~~~dva~~~~~l~s~~ 231 (249)
T 3f9i_A 160 KAGLIGMTKSLSYEVATRGITVNAVAPGFIKSDMTDKLNEKQREA--------IVQKIPLGTYGIPEDVAYAVAFLASNN 231 (249)
T ss_dssp HHHHHHHHHHHHHHHGGGTEEEEEEEECCBC------CCHHHHHH--------HHHHCTTCSCBCHHHHHHHHHHHHSGG
T ss_pred HHHHHHHHHHHHHHHHHcCcEEEEEecCccccCcccccCHHHHHH--------HHhcCCCCCCcCHHHHHHHHHHHcCCc
Confidence 99999999888754 489999999999987643211 111110 001112345688999999999999865
Q ss_pred C---CCceEEEeCCCC
Q 017914 269 S---AWNVYNVVDDDP 281 (364)
Q Consensus 269 ~---~g~~~~i~~~~~ 281 (364)
. .|+.|++.+|..
T Consensus 232 ~~~~tG~~~~vdgG~~ 247 (249)
T 3f9i_A 232 ASYITGQTLHVNGGML 247 (249)
T ss_dssp GTTCCSCEEEESTTSS
T ss_pred cCCccCcEEEECCCEe
Confidence 3 489999988753
|
| >3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.82 E-value=1.1e-18 Score=152.14 Aligned_cols=205 Identities=11% Similarity=-0.044 Sum_probs=140.1
Q ss_pred CCCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhh----h---CCceEEEccCChhhH--Hhh-------
Q 017914 56 WQSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELE----Q---SGFDVHLFNANETAL--MIL------- 118 (364)
Q Consensus 56 ~~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~----~---~~~~~~~~D~~~~~~--~~~------- 118 (364)
...+++||||| +|+||++++++|+++|++|++++|+.++...+. . .++.++.+|++|.+. ..+
T Consensus 7 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 86 (262)
T 3pk0_A 7 DLQGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSGKVIGVQTDVSDRAQCDALAGRAVEEF 86 (262)
T ss_dssp CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTSSSCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCcEEEEEcCCCCHHHHHHHHHHHHHHh
Confidence 45678999999 999999999999999999999999877654432 1 367889999999764 222
Q ss_pred ccCceeeEEEEecCCCCCCCCh----hhhHHHHH------HHH----hhcCCccEEEEEccceeecCCCCccccCCCCCC
Q 017914 119 TTLKNYTHLLVSIPPLEGTGDP----MLKHGELL------RST----LMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPAN 184 (364)
Q Consensus 119 ~~~d~v~~~~~~~~~~~~~~~~----~~~~~~~l------~~a----~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~ 184 (364)
..+|+++|+++........... ......|+ .++ +++.+..++|++||...+. .+..
T Consensus 87 g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~----------~~~~ 156 (262)
T 3pk0_A 87 GGIDVVCANAGVFPDAPLATMTPEQLNGIFAVNVNGTFYAVQACLDALIASGSGRVVLTSSITGPI----------TGYP 156 (262)
T ss_dssp SCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCEEEEECCSBTTT----------BCCT
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhcc----------CCCC
Confidence 3789999999865432211111 11122232 222 2234567999999865320 0112
Q ss_pred CCChhHHHHHHHHHHHHHhhhh---cCCcEEEEEecceecCCCC-----hHHHHHHhcCcccccccccCCcccccccHHH
Q 017914 185 PTTELGRLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRS-----SVDTIIKQLPLSEGQKMRRARQYTSRIHVDD 256 (364)
Q Consensus 185 ~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D 256 (364)
+...|+.+|...+.+.+.++.+ .|+++++++||.+.++... ....+....+ ...+.+++|
T Consensus 157 ~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~p------------~~r~~~p~d 224 (262)
T 3pk0_A 157 GWSHYGATKAAQLGFMRTAAIELAPHKITVNAIMPGNIMTEGLLENGEEYIASMARSIP------------AGALGTPED 224 (262)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHTTCHHHHHHHHTTST------------TSSCBCHHH
T ss_pred CChhhHHHHHHHHHHHHHHHHHHHhhCcEEEEEEeCcCcCccccccCHHHHHHHHhcCC------------CCCCcCHHH
Confidence 3468999999999999998765 5899999999999875311 1111111111 122477999
Q ss_pred HHHHHHHHccCC---CCCceEEEeCCCCC
Q 017914 257 ICQVLSASIDKP---SAWNVYNVVDDDPA 282 (364)
Q Consensus 257 va~~~~~~l~~~---~~g~~~~i~~~~~~ 282 (364)
+|++++.++... -.|+++++.+|..+
T Consensus 225 va~~v~~L~s~~~~~itG~~i~vdGG~~~ 253 (262)
T 3pk0_A 225 IGHLAAFLATKEAGYITGQAIAVDGGQVL 253 (262)
T ss_dssp HHHHHHHHHSGGGTTCCSCEEEESTTTTC
T ss_pred HHHHHHHHhCccccCCcCCEEEECCCeec
Confidence 999999998754 34899999888654
|
| >3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A* | Back alignment and structure |
|---|
Probab=99.82 E-value=6.5e-19 Score=152.20 Aligned_cols=204 Identities=11% Similarity=-0.033 Sum_probs=137.5
Q ss_pred CCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCc-hhhhhh----hh--CCceEEEccCChhhH--Hhh-------cc
Q 017914 58 SPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNV-MKKKEL----EQ--SGFDVHLFNANETAL--MIL-------TT 120 (364)
Q Consensus 58 ~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~-~~~~~l----~~--~~~~~~~~D~~~~~~--~~~-------~~ 120 (364)
+++++|||| +|+||++++++|+++|++|++++|+. +..+.+ .. .++.++.+|++|.+. ..+ ..
T Consensus 3 ~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 82 (246)
T 3osu_A 3 MTKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVADADEVKAMIKEVVSQFGS 82 (246)
T ss_dssp CSCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 457899999 99999999999999999999988854 333222 11 357789999999763 222 37
Q ss_pred CceeeEEEEecCCCCCCCCh----hhhHHH------HHHHHh----hcCCccEEEEEccceeecCCCCccccCCCCCCCC
Q 017914 121 LKNYTHLLVSIPPLEGTGDP----MLKHGE------LLRSTL----MNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANPT 186 (364)
Q Consensus 121 ~d~v~~~~~~~~~~~~~~~~----~~~~~~------~l~~a~----~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~ 186 (364)
+|+++|+++........... ...... ++..++ ++.+..++|++||...+... .+.
T Consensus 83 id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~~ 151 (246)
T 3osu_A 83 LDVLVNNAGITRDNLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQRSGAIINLSSVVGAVGN-----------PGQ 151 (246)
T ss_dssp CCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCC-----------TTC
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcCCC-----------CCC
Confidence 89999999865432211111 111222 333333 34556799999997654322 134
Q ss_pred ChhHHHHHHHHHHHHHhhh---hcCCcEEEEEecceecCCCCh-HHHHHHhcCcccccccccCCcccccccHHHHHHHHH
Q 017914 187 TELGRLRLSAEKGWLNLGR---DLGISAQVFRLGGIYGPGRSS-VDTIIKQLPLSEGQKMRRARQYTSRIHVDDICQVLS 262 (364)
Q Consensus 187 ~~Y~~sK~~~E~~~~~~~~---~~~~~~~ilRp~~v~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~ 262 (364)
..|+.+|...+.+.+.++. ..|+++++++||.+.++.... ........ . .......+.+.+|+|++++
T Consensus 152 ~~Y~~sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~--~------~~~p~~r~~~~~dva~~v~ 223 (246)
T 3osu_A 152 ANYVATKAGVIGLTKSAARELASRGITVNAVAPGFIVSDMTDALSDELKEQM--L------TQIPLARFGQDTDIANTVA 223 (246)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBGGGCCSCSCHHHHHHH--H------TTCTTCSCBCHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECCCcCCcccccCHHHHHHH--H------hcCCCCCCcCHHHHHHHHH
Confidence 6899999999999988875 458999999999998875322 11111110 0 0111234577899999999
Q ss_pred HHccCCC---CCceEEEeCCC
Q 017914 263 ASIDKPS---AWNVYNVVDDD 280 (364)
Q Consensus 263 ~~l~~~~---~g~~~~i~~~~ 280 (364)
.++.... .|++|++.+|.
T Consensus 224 ~l~s~~~~~itG~~i~vdgG~ 244 (246)
T 3osu_A 224 FLASDKAKYITGQTIHVNGGM 244 (246)
T ss_dssp HHTSGGGTTCCSCEEEESTTS
T ss_pred HHhCccccCCCCCEEEeCCCc
Confidence 9987653 38999998874
|
| >2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.82 E-value=5e-19 Score=152.93 Aligned_cols=206 Identities=11% Similarity=0.038 Sum_probs=138.0
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhh-CCceEEEccCChhhH--Hh---hccCceeeEEEE
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQ-SGFDVHLFNANETAL--MI---LTTLKNYTHLLV 129 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~-~~~~~~~~D~~~~~~--~~---~~~~d~v~~~~~ 129 (364)
..+|+||||| +|+||++++++|+++|++|++++|+.++...+.+ .++.++.+|++|.+. .. +..+|.++|+++
T Consensus 4 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~lv~~Ag 83 (246)
T 2ag5_A 4 LDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEKYPGIQTRVLDVTKKKQIDQFANEVERLDVLFNVAG 83 (246)
T ss_dssp TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGGGSTTEEEEECCTTCHHHHHHHHHHCSCCSEEEECCC
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhccCceEEEeeCCCHHHHHHHHHHhCCCCEEEECCc
Confidence 4568999999 9999999999999999999999998776554432 267889999999764 22 356899999987
Q ss_pred ecCCCCCCC----ChhhhHHH------HHHHH----hhcCCccEEEEEccceeecCCCCccccCCCCCCCCChhHHHHHH
Q 017914 130 SIPPLEGTG----DPMLKHGE------LLRST----LMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANPTTELGRLRLS 195 (364)
Q Consensus 130 ~~~~~~~~~----~~~~~~~~------~l~~a----~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~~sK~~ 195 (364)
......... +....... ++..+ +++.+.+++|++||...+.... .+...|+.+|..
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~----------~~~~~Y~~sK~a 153 (246)
T 2ag5_A 84 FVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASSVKGV----------VNRCVYSTTKAA 153 (246)
T ss_dssp CCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBCC----------TTBHHHHHHHHH
T ss_pred cCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechHhCcCCC----------CCCccHHHHHHH
Confidence 644321111 11111112 22222 2234567999999976442211 134689999999
Q ss_pred HHHHHHHhhhh---cCCcEEEEEecceecCCCCh-H------HHHHHhcCcccccccccCCcccccccHHHHHHHHHHHc
Q 017914 196 AEKGWLNLGRD---LGISAQVFRLGGIYGPGRSS-V------DTIIKQLPLSEGQKMRRARQYTSRIHVDDICQVLSASI 265 (364)
Q Consensus 196 ~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~-~------~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l 265 (364)
.|.+.+.++.+ .|++++++|||.++++.... + ...... +... .....+.+++|+|++++.++
T Consensus 154 ~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~--~~~~------~~~~~~~~~~dvA~~v~~l~ 225 (246)
T 2ag5_A 154 VIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQERIQARGNPEEARND--FLKR------QKTGRFATAEEIAMLCVYLA 225 (246)
T ss_dssp HHHHHHHHHHHHGGGTEEEEEEEESCEECHHHHHHHHHSSSHHHHHHH--HHHT------CTTSSCEEHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhhcCcEEEEEeeCcCcCcchhhhhhcccCcHHHHHH--HHhc------CCCCCCCCHHHHHHHHHHHh
Confidence 99999988754 48999999999999864211 1 000000 0000 01123588999999999998
Q ss_pred cCC---CCCceEEEeCCC
Q 017914 266 DKP---SAWNVYNVVDDD 280 (364)
Q Consensus 266 ~~~---~~g~~~~i~~~~ 280 (364)
... -.|+.+++.+|.
T Consensus 226 s~~~~~~tG~~i~vdgG~ 243 (246)
T 2ag5_A 226 SDESAYVTGNPVIIDGGW 243 (246)
T ss_dssp SGGGTTCCSCEEEECTTG
T ss_pred CccccCCCCCEEEECCCc
Confidence 754 248999988763
|
| >1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.81 E-value=2.9e-19 Score=153.99 Aligned_cols=201 Identities=10% Similarity=-0.060 Sum_probs=136.6
Q ss_pred CCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCChhhH--Hhhc------cCceeeEEEE
Q 017914 59 PNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETAL--MILT------TLKNYTHLLV 129 (364)
Q Consensus 59 ~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~--~~~~------~~d~v~~~~~ 129 (364)
+|+||||| +|+||++++++|+++|++|++++|+.+ . ..+.++.+|++|.+. ..++ .+|.++|+++
T Consensus 2 ~k~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~-~-----~~~~~~~~D~~~~~~~~~~~~~~~~~~~~d~li~~ag 75 (242)
T 1uay_A 2 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRRE-G-----EDLIYVEGDVTREEDVRRAVARAQEEAPLFAVVSAAG 75 (242)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCC-S-----SSSEEEECCTTCHHHHHHHHHHHHHHSCEEEEEECCC
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEccCcc-c-----cceEEEeCCCCCHHHHHHHHHHHHhhCCceEEEEccc
Confidence 57899999 999999999999999999999999865 2 456899999999764 3333 6799999987
Q ss_pred ecCCCCCCC--------ChhhhHHH------HHHHHhh----cCC------ccEEEEEccceeecCCCCccccCCCCCCC
Q 017914 130 SIPPLEGTG--------DPMLKHGE------LLRSTLM----NGH------LQWLGYLSSTGVYGHSGGAWVDEDYPANP 185 (364)
Q Consensus 130 ~~~~~~~~~--------~~~~~~~~------~l~~a~~----~~~------~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~ 185 (364)
......... +....... ++..++. ..+ .+++|++||...+.... +
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~-----------~ 144 (242)
T 1uay_A 76 VGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQI-----------G 144 (242)
T ss_dssp CCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHCCT-----------T
T ss_pred ccCcccccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccCCC-----------C
Confidence 644322111 11111222 2333332 221 23899999987764322 3
Q ss_pred CChhHHHHHHHHHHHHHhhhh---cCCcEEEEEecceecCCCC-hHHHHHHhcCcccccccccCCcccccccHHHHHHHH
Q 017914 186 TTELGRLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRS-SVDTIIKQLPLSEGQKMRRARQYTSRIHVDDICQVL 261 (364)
Q Consensus 186 ~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~ 261 (364)
...|+.+|...|.+++.++.+ .|++++++|||.++++... ....+.... ...... ...+++++|+|+++
T Consensus 145 ~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~--~~~~~~-----~~~~~~~~dva~~~ 217 (242)
T 1uay_A 145 QAAYAASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQGLPEKAKASL--AAQVPF-----PPRLGRPEEYAALV 217 (242)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHHHHTSCHHHHHHH--HTTCCS-----SCSCCCHHHHHHHH
T ss_pred CchhhHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccCcchhhhccchhHHHHH--HhhCCC-----cccCCCHHHHHHHH
Confidence 468999999999998887654 4899999999999886421 111111110 000000 02368899999999
Q ss_pred HHHccCC-CCCceEEEeCCCCCC
Q 017914 262 SASIDKP-SAWNVYNVVDDDPAP 283 (364)
Q Consensus 262 ~~~l~~~-~~g~~~~i~~~~~~s 283 (364)
+.++... ..|+.|++.+|..++
T Consensus 218 ~~l~~~~~~~G~~~~v~gG~~~~ 240 (242)
T 1uay_A 218 LHILENPMLNGEVVRLDGALRMA 240 (242)
T ss_dssp HHHHHCTTCCSCEEEESTTCCCC
T ss_pred HHHhcCCCCCCcEEEEcCCeecC
Confidence 9999874 348999998886554
|
| >3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.81 E-value=1.4e-18 Score=152.30 Aligned_cols=205 Identities=10% Similarity=-0.022 Sum_probs=141.2
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhh---hCCceEEEccCChhhH--Hhh-------ccCce
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELE---QSGFDVHLFNANETAL--MIL-------TTLKN 123 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~---~~~~~~~~~D~~~~~~--~~~-------~~~d~ 123 (364)
..++++|||| +|+||++++++|+++|++|++++|+.++...+. ..++.++.+|++|.+. ..+ ..+|+
T Consensus 9 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~ 88 (271)
T 3tzq_B 9 LENKVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASVGRGAVHHVVDLTNEVSVRALIDFTIDTFGRLDI 88 (271)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSCHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCCeEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence 4568999999 999999999999999999999999877654432 2467899999999764 222 37899
Q ss_pred eeEEEEecCC-CCCCC-----ChhhhHHHH------HHHHh----hcCCccEEEEEccceeecCCCCccccCCCCCCCCC
Q 017914 124 YTHLLVSIPP-LEGTG-----DPMLKHGEL------LRSTL----MNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANPTT 187 (364)
Q Consensus 124 v~~~~~~~~~-~~~~~-----~~~~~~~~~------l~~a~----~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~ 187 (364)
++|+++.... ..... +.......| +..++ ++.+..++|++||...+.. ..+..
T Consensus 89 lv~nAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~-----------~~~~~ 157 (271)
T 3tzq_B 89 VDNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTMLMCKYAIPRLISAGGGAIVNISSATAHAA-----------YDMST 157 (271)
T ss_dssp EEECCCCCCTTCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSB-----------CSSCH
T ss_pred EEECCCCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEECCHHHcCC-----------CCCCh
Confidence 9999986532 11111 111122223 23333 4556779999999765422 12346
Q ss_pred hhHHHHHHHHHHHHHhhhh---cCCcEEEEEecceecCCCC-hH-HHHHHhcCcccccccccCCcccccccHHHHHHHHH
Q 017914 188 ELGRLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRS-SV-DTIIKQLPLSEGQKMRRARQYTSRIHVDDICQVLS 262 (364)
Q Consensus 188 ~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~ 262 (364)
.|+.+|...+.+.+.++.+ .|+++++++||.++++... .. ....... .. ......+...+|+|++++
T Consensus 158 ~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~--~~------~~~~~r~~~p~dvA~~v~ 229 (271)
T 3tzq_B 158 AYACTKAAIETLTRYVATQYGRHGVRCNAIAPGLVRTPRLEVGLPQPIVDIF--AT------HHLAGRIGEPHEIAELVC 229 (271)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTC---CHHHHHHH--HT------TSTTSSCBCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhhcCEEEEEEEeCCCcCccccccCCHHHHHHH--Hh------cCCCCCCcCHHHHHHHHH
Confidence 8999999999999988765 6899999999999987533 11 1111110 00 001123477999999999
Q ss_pred HHccCCC---CCceEEEeCCC
Q 017914 263 ASIDKPS---AWNVYNVVDDD 280 (364)
Q Consensus 263 ~~l~~~~---~g~~~~i~~~~ 280 (364)
.++.... .|+++++.+|.
T Consensus 230 ~L~s~~~~~itG~~i~vdGG~ 250 (271)
T 3tzq_B 230 FLASDRAAFITGQVIAADSGL 250 (271)
T ss_dssp HHHSGGGTTCCSCEEEESTTT
T ss_pred HHhCcccCCcCCCEEEECCCc
Confidence 9987642 48999998883
|
| >2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8} | Back alignment and structure |
|---|
Probab=99.81 E-value=9.7e-20 Score=157.30 Aligned_cols=203 Identities=11% Similarity=-0.005 Sum_probs=135.1
Q ss_pred CCeEEEEc-CChhhHHHHHHHHhCCCEEEEE-EeCchhhhhhh----h--CCceE-EEccCChhhH--Hh-------hcc
Q 017914 59 PNRMLILG-MGFVGRIFAEKIKNQGWVVSGT-CTNVMKKKELE----Q--SGFDV-HLFNANETAL--MI-------LTT 120 (364)
Q Consensus 59 ~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~-~r~~~~~~~l~----~--~~~~~-~~~D~~~~~~--~~-------~~~ 120 (364)
+++||||| +|+||++++++|+++|++|+++ +|+.++...+. . .++.. +.+|++|.+. .. +..
T Consensus 1 ~k~vlITGasggiG~~~a~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 80 (245)
T 2ph3_A 1 MRKALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRRGSPLVAVLGANLLEAEAATALVHQAAEVLGG 80 (245)
T ss_dssp CCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESSCHHHHHHHHHHHHHTTCSCEEEEECCTTSHHHHHHHHHHHHHHHTC
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHHHhcCC
Confidence 46899999 9999999999999999999998 78766544331 1 24556 8899999663 22 247
Q ss_pred CceeeEEEEecCCCCCC----CChhhhHH----------HHHHHHhhcCCccEEEEEccceeecCCCCccccCCCCCCCC
Q 017914 121 LKNYTHLLVSIPPLEGT----GDPMLKHG----------ELLRSTLMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANPT 186 (364)
Q Consensus 121 ~d~v~~~~~~~~~~~~~----~~~~~~~~----------~~l~~a~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~ 186 (364)
+|+++|+++........ .+...... +.++..+++.+.++||++||...+.... +.
T Consensus 81 ~d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~-----------~~ 149 (245)
T 2ph3_A 81 LDTLVNNAGITRDTLLVRMKDEDWEAVLEANLSAVFRTTREAVKLMMKARFGRIVNITSVVGILGNP-----------GQ 149 (245)
T ss_dssp CCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCS-----------SB
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCEEEEEeChhhccCCC-----------CC
Confidence 89999999764321100 11111111 2333344455678999999975432211 23
Q ss_pred ChhHHHHHHHHHHHHHhhhhc---CCcEEEEEecceecCCCCh-HHHHHHhcCcccccccccCCcccccccHHHHHHHHH
Q 017914 187 TELGRLRLSAEKGWLNLGRDL---GISAQVFRLGGIYGPGRSS-VDTIIKQLPLSEGQKMRRARQYTSRIHVDDICQVLS 262 (364)
Q Consensus 187 ~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilRp~~v~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~ 262 (364)
..|+.+|...|.+.+.++.+. +++++++|||.++++.... ....... +.. ......+++++|+|++++
T Consensus 150 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~--~~~------~~~~~~~~~~~dva~~~~ 221 (245)
T 2ph3_A 150 ANYVASKAGLIGFTRAVAKEYAQRGITVNAVAPGFIETEMTERLPQEVKEA--YLK------QIPAGRFGRPEEVAEAVA 221 (245)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSCHHHHHH--HHH------TCTTCSCBCHHHHHHHHH
T ss_pred cchHHHHHHHHHHHHHHHHHHHHcCeEEEEEEEEeecCcchhhcCHHHHHH--HHh------cCCCCCCcCHHHHHHHHH
Confidence 689999999999998887553 8999999999998753111 0111110 000 001234689999999999
Q ss_pred HHccCC---CCCceEEEeCCC
Q 017914 263 ASIDKP---SAWNVYNVVDDD 280 (364)
Q Consensus 263 ~~l~~~---~~g~~~~i~~~~ 280 (364)
.++..+ ..|+.|++.+|.
T Consensus 222 ~l~~~~~~~~~G~~~~v~gg~ 242 (245)
T 2ph3_A 222 FLVSEKAGYITGQTLCVDGGL 242 (245)
T ss_dssp HHTSGGGTTCCSCEEEESTTC
T ss_pred HHhCcccccccCCEEEECCCC
Confidence 999764 248899998764
|
| >2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A | Back alignment and structure |
|---|
Probab=99.81 E-value=1.9e-19 Score=156.44 Aligned_cols=212 Identities=8% Similarity=-0.077 Sum_probs=138.5
Q ss_pred CCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchh--hhhhhh--CCceEEEccCChhhH--Hhhc-------cCce
Q 017914 58 SPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMK--KKELEQ--SGFDVHLFNANETAL--MILT-------TLKN 123 (364)
Q Consensus 58 ~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~--~~~l~~--~~~~~~~~D~~~~~~--~~~~-------~~d~ 123 (364)
.+++||||| +|+||++++++|+++|++|++++|+.+. ...+.. .++.++.+|++|.+. ..++ .+|+
T Consensus 3 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~ 82 (255)
T 2q2v_A 3 KGKTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDPAPALAEIARHGVKAVHHPADLSDVAQIEALFALAEREFGGVDI 82 (255)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHHHTTSCCEEEECCCTTSHHHHHHHHHHHHHHHSSCSE
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhcCCceEEEeCCCCCHHHHHHHHHHHHHHcCCCCE
Confidence 458999999 9999999999999999999999997652 112221 346788899999764 3333 7899
Q ss_pred eeEEEEecCCCCCCC----ChhhhH----------HHHHHHHhhcCCccEEEEEccceeecCCCCccccCCCCCCCCChh
Q 017914 124 YTHLLVSIPPLEGTG----DPMLKH----------GELLRSTLMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANPTTEL 189 (364)
Q Consensus 124 v~~~~~~~~~~~~~~----~~~~~~----------~~~l~~a~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y 189 (364)
++|+++......... +..... .+.++..+++.+.+++|++||...+... .+...|
T Consensus 83 lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~~~~Y 151 (255)
T 2q2v_A 83 LVNNAGIQHVAPVEQFPLESWDKIIALNLSAVFHGTRLALPGMRARNWGRIINIASVHGLVGS-----------TGKAAY 151 (255)
T ss_dssp EEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCC-----------TTBHHH
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcCchhccCC-----------CCchhH
Confidence 999997643211001 111111 1233344456667899999997655322 134689
Q ss_pred HHHHHHHHHHHHHhhhh---cCCcEEEEEecceecCCCChHHH-HHHhcCcc--ccccc-ccCCcccccccHHHHHHHHH
Q 017914 190 GRLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRSSVDT-IIKQLPLS--EGQKM-RRARQYTSRIHVDDICQVLS 262 (364)
Q Consensus 190 ~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~-~~~~~~~~--~~~~~-~~~~~~~~~i~v~Dva~~~~ 262 (364)
+.+|...+.+.+.++.+ .|+++++|+||.++++....... ........ ....+ ........+++++|+|++++
T Consensus 152 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~~~ 231 (255)
T 2q2v_A 152 VAAKHGVVGLTKVVGLETATSNVTCNAICPGWVLTPLVQKQIDDRAANGGDPLQAQHDLLAEKQPSLAFVTPEHLGELVL 231 (255)
T ss_dssp HHHHHHHHHHHHHHHHHTTTSSEEEEEEEESSBCCHHHHHHHHHHHHHTCCHHHHHHHHHTTTCTTCCCBCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhcccCcEEEEEeeCCCcCcchhhhcccccccccchHHHHHHHHhccCCCCCCcCHHHHHHHHH
Confidence 99999999999988755 47999999999998764211100 00000000 00000 11122345799999999999
Q ss_pred HHccCC---CCCceEEEeCCC
Q 017914 263 ASIDKP---SAWNVYNVVDDD 280 (364)
Q Consensus 263 ~~l~~~---~~g~~~~i~~~~ 280 (364)
.++... -.|+.|++.+|.
T Consensus 232 ~l~s~~~~~~tG~~~~vdgG~ 252 (255)
T 2q2v_A 232 FLCSEAGSQVRGAAWNVDGGW 252 (255)
T ss_dssp HHTSGGGTTCCSCEEEESTTG
T ss_pred HHhCCccCCCCCCEEEECCCc
Confidence 998754 238999998874
|
| >2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.81 E-value=8.6e-19 Score=152.37 Aligned_cols=212 Identities=11% Similarity=0.006 Sum_probs=138.6
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhh--CCceEEEccCChhhH--Hhh-------ccCcee
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQ--SGFDVHLFNANETAL--MIL-------TTLKNY 124 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~--~~~~~~~~D~~~~~~--~~~-------~~~d~v 124 (364)
..+++||||| +|+||++++++|+++|++|++++|+.++ ..+.+ .. .++.+|++|.+. ..+ ..+|++
T Consensus 4 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-~~~~~~~~~-~~~~~D~~~~~~~~~~~~~~~~~~g~iD~l 81 (256)
T 2d1y_A 4 FAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEG-KEVAEAIGG-AFFQVDLEDERERVRFVEEAAYALGRVDVL 81 (256)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTH-HHHHHHHTC-EEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhH-HHHHHHhhC-CEEEeeCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 4568999999 9999999999999999999999998765 33221 13 788999999663 222 368999
Q ss_pred eEEEEecCCCCCCCCh----hhhHHHH------HHH----HhhcCCccEEEEEccceeecCCCCccccCCCCCCCCChhH
Q 017914 125 THLLVSIPPLEGTGDP----MLKHGEL------LRS----TLMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANPTTELG 190 (364)
Q Consensus 125 ~~~~~~~~~~~~~~~~----~~~~~~~------l~~----a~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~ 190 (364)
+|+++........... ......| +.. .+++.+.+++|++||...+... .+...|+
T Consensus 82 v~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~-----------~~~~~Y~ 150 (256)
T 2d1y_A 82 VNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLFAE-----------QENAAYN 150 (256)
T ss_dssp EECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSBC-----------TTBHHHH
T ss_pred EECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccccccCCC-----------CCChhHH
Confidence 9999865432111111 1111222 222 2234567899999997643211 1346899
Q ss_pred HHHHHHHHHHHHhhhh---cCCcEEEEEecceecCCCChHHHHHHh-c-CcccccccccCCcccccccHHHHHHHHHHHc
Q 017914 191 RLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRSSVDTIIKQ-L-PLSEGQKMRRARQYTSRIHVDDICQVLSASI 265 (364)
Q Consensus 191 ~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l 265 (364)
.+|...|.+.+.++.+ .++++++++||.+.++. ....... . .-..............+++++|+|++++.++
T Consensus 151 ~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~~~~l~ 227 (256)
T 2d1y_A 151 ASKGGLVNLTRSLALDLAPLRIRVNAVAPGAIATEA---VLEAIALSPDPERTRRDWEDLHALRRLGKPEEVAEAVLFLA 227 (256)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHH---HHHHHC--------CHHHHTTSTTSSCBCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCccCch---hhhccccccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHh
Confidence 9999999999888754 48999999999987542 1111000 0 0000000111122345789999999999998
Q ss_pred cCC---CCCceEEEeCCCCCCH
Q 017914 266 DKP---SAWNVYNVVDDDPAPR 284 (364)
Q Consensus 266 ~~~---~~g~~~~i~~~~~~s~ 284 (364)
... ..|+.|++.+|..+++
T Consensus 228 s~~~~~~~G~~~~v~gG~~~~~ 249 (256)
T 2d1y_A 228 SEKASFITGAILPVDGGMTASF 249 (256)
T ss_dssp SGGGTTCCSCEEEESTTGGGBC
T ss_pred CchhcCCCCCEEEECCCccccc
Confidence 764 3488999988865443
|
| >2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.81 E-value=8.6e-19 Score=154.83 Aligned_cols=205 Identities=8% Similarity=-0.070 Sum_probs=135.6
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhh------hCCceEEEccCChhhH--Hhh-------cc
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELE------QSGFDVHLFNANETAL--MIL-------TT 120 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~------~~~~~~~~~D~~~~~~--~~~-------~~ 120 (364)
..+++||||| +|+||+++++.|+++|++|++++|+.++...+. ..++.++.+|++|.+. ..+ ..
T Consensus 42 l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~ 121 (285)
T 2c07_A 42 GENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTEHKN 121 (285)
T ss_dssp CSSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHCSC
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCceeEEECCCCCHHHHHHHHHHHHHhcCC
Confidence 4568999999 999999999999999999999998876544321 1357789999999764 222 36
Q ss_pred CceeeEEEEecCCCCCCC----ChhhhHHH----------HHHHHhhcCCccEEEEEccceeecCCCCccccCCCCCCCC
Q 017914 121 LKNYTHLLVSIPPLEGTG----DPMLKHGE----------LLRSTLMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANPT 186 (364)
Q Consensus 121 ~d~v~~~~~~~~~~~~~~----~~~~~~~~----------~l~~a~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~ 186 (364)
+|+|+|+++......... +....... .+...+.+.+.++||++||...+... .+.
T Consensus 122 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~-----------~~~ 190 (285)
T 2c07_A 122 VDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLTGN-----------VGQ 190 (285)
T ss_dssp CCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCC-----------TTC
T ss_pred CCEEEECCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhhccCC-----------CCC
Confidence 899999998654321111 11111111 22222334566899999997654322 134
Q ss_pred ChhHHHHHHHHHHHHHhhhh---cCCcEEEEEecceecCCCChH-HHHHHhcCcccccccccCCcccccccHHHHHHHHH
Q 017914 187 TELGRLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRSSV-DTIIKQLPLSEGQKMRRARQYTSRIHVDDICQVLS 262 (364)
Q Consensus 187 ~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~ 262 (364)
..|+.+|.+.|.+++.++.+ .|+++++++||.+.++....+ ..+.... .... ....+++++|+|++++
T Consensus 191 ~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~--~~~~------~~~~~~~~~dvA~~~~ 262 (285)
T 2c07_A 191 ANYSSSKAGVIGFTKSLAKELASRNITVNAIAPGFISSDMTDKISEQIKKNI--ISNI------PAGRMGTPEEVANLAC 262 (285)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC-----CCHHHHHHH--HTTC------TTSSCBCHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHHHHhCcEEEEEEeCcEecCchhhcCHHHHHHH--HhhC------CCCCCCCHHHHHHHHH
Confidence 68999999999999888754 489999999999987642211 1111110 0000 1123689999999999
Q ss_pred HHccCC---CCCceEEEeCCC
Q 017914 263 ASIDKP---SAWNVYNVVDDD 280 (364)
Q Consensus 263 ~~l~~~---~~g~~~~i~~~~ 280 (364)
.++... ..|+.|++.+|.
T Consensus 263 ~l~~~~~~~~~G~~i~v~gG~ 283 (285)
T 2c07_A 263 FLSSDKSGYINGRVFVIDGGL 283 (285)
T ss_dssp HHHSGGGTTCCSCEEEESTTS
T ss_pred HHhCCCcCCCCCCEEEeCCCc
Confidence 998764 248899998774
|
| >2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum} | Back alignment and structure |
|---|
Probab=99.81 E-value=3.6e-19 Score=153.89 Aligned_cols=203 Identities=9% Similarity=-0.007 Sum_probs=127.9
Q ss_pred CCCeEEEEc-CChhhHHHHHHHHhCCCEEEEE-EeCchhhhhh----h--hCCceEEEccCChhhH--Hhh-------cc
Q 017914 58 SPNRMLILG-MGFVGRIFAEKIKNQGWVVSGT-CTNVMKKKEL----E--QSGFDVHLFNANETAL--MIL-------TT 120 (364)
Q Consensus 58 ~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~-~r~~~~~~~l----~--~~~~~~~~~D~~~~~~--~~~-------~~ 120 (364)
.+++||||| +|+||++++++|+++|++|+++ .|+.+..+.+ . ..++.++.+|++|.+. ..+ ..
T Consensus 4 ~~~~vlItGasggiG~~~a~~l~~~G~~V~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 83 (247)
T 2hq1_A 4 KGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAGINVVVAKGDVKNPEDVENMVKTAMDAFGR 83 (247)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECTTCSHHHHHHHHHHHTTCCEEEEESCTTSHHHHHHHHHHHHHHHSC
T ss_pred CCcEEEEECCCchHHHHHHHHHHHCCCEEEEEcCcCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence 457999999 9999999999999999999999 5555443322 1 1357889999999763 223 37
Q ss_pred CceeeEEEEecCCCC----CCCChhhhHHHHH------HHH----hhcCCccEEEEEccce-eecCCCCccccCCCCCCC
Q 017914 121 LKNYTHLLVSIPPLE----GTGDPMLKHGELL------RST----LMNGHLQWLGYLSSTG-VYGHSGGAWVDEDYPANP 185 (364)
Q Consensus 121 ~d~v~~~~~~~~~~~----~~~~~~~~~~~~l------~~a----~~~~~~~r~v~~Ss~~-vy~~~~~~~~~E~~~~~~ 185 (364)
+|.|+|+++...... ...+.......|+ ..+ +++.+.+++|++||.. .|+.. +
T Consensus 84 ~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~------------~ 151 (247)
T 2hq1_A 84 IDILVNNAGITRDTLMLKMSEKDWDDVLNTNLKSAYLCTKAVSKIMLKQKSGKIINITSIAGIIGNA------------G 151 (247)
T ss_dssp CCEEEECC---------------CHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECC---------------------
T ss_pred CCEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhccCCC------------C
Confidence 899999998653211 1111222222222 222 2344678999999864 44321 3
Q ss_pred CChhHHHHHHHHHHHHHhhhh---cCCcEEEEEecceecCCCChH-HHHHHhcCcccccccccCCcccccccHHHHHHHH
Q 017914 186 TTELGRLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRSSV-DTIIKQLPLSEGQKMRRARQYTSRIHVDDICQVL 261 (364)
Q Consensus 186 ~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~ 261 (364)
...|+.+|...|.+++.++.+ .++++++++||.+.++....+ ...... + ........+++++|+|+++
T Consensus 152 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~--~------~~~~~~~~~~~~~dva~~~ 223 (247)
T 2hq1_A 152 QANYAASKAGLIGFTKSIAKEFAAKGIYCNAVAPGIIKTDMTDVLPDKVKEM--Y------LNNIPLKRFGTPEEVANVV 223 (247)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSCHHHHHH--H------HTTSTTSSCBCHHHHHHHH
T ss_pred CcHhHHHHHHHHHHHHHHHHHHHHcCcEEEEEEEEEEeccchhhcchHHHHH--H------HhhCCCCCCCCHHHHHHHH
Confidence 368999999999999888654 389999999999876421100 111110 0 0111223568999999999
Q ss_pred HHHccCC---CCCceEEEeCCC
Q 017914 262 SASIDKP---SAWNVYNVVDDD 280 (364)
Q Consensus 262 ~~~l~~~---~~g~~~~i~~~~ 280 (364)
+.++..+ ..|++|++.+|.
T Consensus 224 ~~l~~~~~~~~~G~~~~v~gG~ 245 (247)
T 2hq1_A 224 GFLASDDSNYITGQVINIDGGL 245 (247)
T ss_dssp HHHHSGGGTTCCSCEEEESTTC
T ss_pred HHHcCcccccccCcEEEeCCCc
Confidence 9988754 248899998874
|
| >3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=99.81 E-value=1.5e-18 Score=150.97 Aligned_cols=204 Identities=12% Similarity=0.007 Sum_probs=136.5
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhh-hhhhhCCceEEEccCChhhH--Hhh-------ccCceee
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKK-KELEQSGFDVHLFNANETAL--MIL-------TTLKNYT 125 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~-~~l~~~~~~~~~~D~~~~~~--~~~-------~~~d~v~ 125 (364)
..+++||||| +|+||+++++.|+++|++|++++|+.++. ..+...++.++.+|++|.+. ..+ ..+|+++
T Consensus 25 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lv 104 (260)
T 3gem_A 25 LSSAPILITGASQRVGLHCALRLLEHGHRVIISYRTEHASVTELRQAGAVALYGDFSCETGIMAFIDLLKTQTSSLRAVV 104 (260)
T ss_dssp --CCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESSCCHHHHHHHHHTCEEEECCTTSHHHHHHHHHHHHHHCSCCSEEE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhcCCeEEECCCCCHHHHHHHHHHHHHhcCCCCEEE
Confidence 4568999999 99999999999999999999999987653 33444568999999999763 222 3689999
Q ss_pred EEEEecCCCCCCCChh---hhHHHHH------HH----HhhcCCccEEEEEccceeecCCCCccccCCCCCCCCChhHHH
Q 017914 126 HLLVSIPPLEGTGDPM---LKHGELL------RS----TLMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANPTTELGRL 192 (364)
Q Consensus 126 ~~~~~~~~~~~~~~~~---~~~~~~l------~~----a~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~~s 192 (364)
|+++.........+.. .....|+ .. .+++.+..++|++||...+... .+...|+.+
T Consensus 105 ~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~-----------~~~~~Y~as 173 (260)
T 3gem_A 105 HNASEWLAETPGEEADNFTRMFSVHMLAPYLINLHCEPLLTASEVADIVHISDDVTRKGS-----------SKHIAYCAT 173 (260)
T ss_dssp ECCCCCCCCCTTCHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGTCC-----------SSCHHHHHH
T ss_pred ECCCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhcCCC-----------CCcHhHHHH
Confidence 9998654332111111 1112222 22 2234556799999997654321 234689999
Q ss_pred HHHHHHHHHHhhhhc--CCcEEEEEecceecCCCCh---HHHHHHhcCcccccccccCCcccccccHHHHHHHHHHHccC
Q 017914 193 RLSAEKGWLNLGRDL--GISAQVFRLGGIYGPGRSS---VDTIIKQLPLSEGQKMRRARQYTSRIHVDDICQVLSASIDK 267 (364)
Q Consensus 193 K~~~E~~~~~~~~~~--~~~~~ilRp~~v~g~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~ 267 (364)
|...+.+.+.++.+. ++++++++||.+..+.... ...+.... ...-+..++|+|++++.+++.
T Consensus 174 Kaa~~~l~~~la~e~~~~Irvn~v~PG~v~t~~~~~~~~~~~~~~~~------------p~~r~~~~edva~~v~~L~~~ 241 (260)
T 3gem_A 174 KAGLESLTLSFAARFAPLVKVNGIAPALLMFQPKDDAAYRANALAKS------------ALGIEPGAEVIYQSLRYLLDS 241 (260)
T ss_dssp HHHHHHHHHHHHHHHTTTCEEEEEEECTTCC---------------C------------CSCCCCCTHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHCCCCEEEEEeecccccCCCCCHHHHHHHHhcC------------CCCCCCCHHHHHHHHHHHhhC
Confidence 999999999887654 4999999999997654221 11111111 112235689999999999865
Q ss_pred C-CCCceEEEeCCCCCC
Q 017914 268 P-SAWNVYNVVDDDPAP 283 (364)
Q Consensus 268 ~-~~g~~~~i~~~~~~s 283 (364)
. -.|+++++.+|..++
T Consensus 242 ~~itG~~i~vdGG~~~~ 258 (260)
T 3gem_A 242 TYVTGTTLTVNGGRHVK 258 (260)
T ss_dssp SSCCSCEEEESTTTTTC
T ss_pred CCCCCCEEEECCCcccC
Confidence 4 348999999887654
|
| >1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A* | Back alignment and structure |
|---|
Probab=99.81 E-value=8.7e-19 Score=152.80 Aligned_cols=206 Identities=9% Similarity=-0.101 Sum_probs=136.7
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEe-Cchhhhhhh------hCCceEEEccCChhhH--Hhh-------c
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCT-NVMKKKELE------QSGFDVHLFNANETAL--MIL-------T 119 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r-~~~~~~~l~------~~~~~~~~~D~~~~~~--~~~-------~ 119 (364)
..+++||||| +|+||++++++|+++|++|++++| +.+....+. ..++.++.+|++|.+. ..+ .
T Consensus 5 l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g 84 (261)
T 1gee_A 5 LEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEFG 84 (261)
T ss_dssp GTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 3468999999 999999999999999999999999 655443321 1356789999999663 223 2
Q ss_pred cCceeeEEEEecCCCCCCC----ChhhhHHHH------H----HHHhhcCC-ccEEEEEccceeecCCCCccccCCCCCC
Q 017914 120 TLKNYTHLLVSIPPLEGTG----DPMLKHGEL------L----RSTLMNGH-LQWLGYLSSTGVYGHSGGAWVDEDYPAN 184 (364)
Q Consensus 120 ~~d~v~~~~~~~~~~~~~~----~~~~~~~~~------l----~~a~~~~~-~~r~v~~Ss~~vy~~~~~~~~~E~~~~~ 184 (364)
.+|+|+|+++......... +.......| + +..+.+.+ .+++|++||...+. +..
T Consensus 85 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~-----------~~~ 153 (261)
T 1gee_A 85 KLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKI-----------PWP 153 (261)
T ss_dssp CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTS-----------CCT
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEeCCHHhcC-----------CCC
Confidence 7899999997654321111 111111222 2 22223334 57999999975432 223
Q ss_pred CCChhHHHHHHHHHHHHHhhhh---cCCcEEEEEecceecCCCChH---HHHHHhcCcccccccccCCcccccccHHHHH
Q 017914 185 PTTELGRLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRSSV---DTIIKQLPLSEGQKMRRARQYTSRIHVDDIC 258 (364)
Q Consensus 185 ~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva 258 (364)
+...|+.+|.+.|.+.+.++.+ .+++++++|||.++++..... ...... +... .....+++++|+|
T Consensus 154 ~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~--~~~~------~~~~~~~~~~dva 225 (261)
T 1gee_A 154 LFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAEKFADPEQRAD--VESM------IPMGYIGEPEEIA 225 (261)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGGHHHHHSHHHHHH--HHTT------CTTSSCBCHHHHH
T ss_pred CccHHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCcCCchhhhcccChhHHHH--HHhc------CCCCCCcCHHHHH
Confidence 4578999999999998887654 389999999999988753211 011110 0000 0113468999999
Q ss_pred HHHHHHccCC---CCCceEEEeCCCC
Q 017914 259 QVLSASIDKP---SAWNVYNVVDDDP 281 (364)
Q Consensus 259 ~~~~~~l~~~---~~g~~~~i~~~~~ 281 (364)
++++.++... ..|+.+++.+|..
T Consensus 226 ~~~~~l~~~~~~~~~G~~~~v~gg~~ 251 (261)
T 1gee_A 226 AVAAWLASSEASYVTGITLFADGGMT 251 (261)
T ss_dssp HHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred HHHHHHhCccccCCCCcEEEEcCCcc
Confidence 9999998753 3488999988753
|
| >2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A | Back alignment and structure |
|---|
Probab=99.81 E-value=4.7e-19 Score=154.65 Aligned_cols=205 Identities=7% Similarity=-0.061 Sum_probs=135.9
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCChhhH--Hhh-------ccCceeeE
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETAL--MIL-------TTLKNYTH 126 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~--~~~-------~~~d~v~~ 126 (364)
..+|+||||| +|+||++++++|+++|++|++++|+.+. ..++.++.+|++|.+. ..+ ..+|+++|
T Consensus 6 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-----~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~lv~ 80 (264)
T 2dtx_A 6 LRDKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPG-----EAKYDHIECDVTNPDQVKASIDHIFKEYGSISVLVN 80 (264)
T ss_dssp GTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSCCC-----SCSSEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEecCccc-----CCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 3468999999 9999999999999999999999998654 2467899999999763 222 36899999
Q ss_pred EEEecCCCCCCC----ChhhhHHHHH----------HHHhhcCCccEEEEEccceeecCCCCccccCCCCCCCCChhHHH
Q 017914 127 LLVSIPPLEGTG----DPMLKHGELL----------RSTLMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANPTTELGRL 192 (364)
Q Consensus 127 ~~~~~~~~~~~~----~~~~~~~~~l----------~~a~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~~s 192 (364)
+++......... +.......|+ +..+++.+.+++|++||...+... .+...|+.+
T Consensus 81 ~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~~~~Y~~s 149 (264)
T 2dtx_A 81 NAGIESYGKIESMSMGEWRRIIDVNLFGYYYASKFAIPYMIRSRDPSIVNISSVQASIIT-----------KNASAYVTS 149 (264)
T ss_dssp CCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEECCGGGTSCC-----------TTBHHHHHH
T ss_pred CCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCchhccCC-----------CCchhHHHH
Confidence 987643321111 1111112222 222334566899999997655321 234689999
Q ss_pred HHHHHHHHHHhhhhcC--CcEEEEEecceecCCCChHHHHHHh---cCc----ccccccccCCcccccccHHHHHHHHHH
Q 017914 193 RLSAEKGWLNLGRDLG--ISAQVFRLGGIYGPGRSSVDTIIKQ---LPL----SEGQKMRRARQYTSRIHVDDICQVLSA 263 (364)
Q Consensus 193 K~~~E~~~~~~~~~~~--~~~~ilRp~~v~g~~~~~~~~~~~~---~~~----~~~~~~~~~~~~~~~i~v~Dva~~~~~ 263 (364)
|...|.+.+.++.+.+ +++++|+||.+.++.. ..+... ..- ..............+++++|+|++++.
T Consensus 150 K~a~~~~~~~la~e~~~~i~vn~v~PG~v~t~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p~dvA~~v~~ 226 (264)
T 2dtx_A 150 KHAVIGLTKSIALDYAPLLRCNAVCPATIDTPLV---RKAAELEVGSDPMRIEKKISEWGHEHPMQRIGKPQEVASAVAF 226 (264)
T ss_dssp HHHHHHHHHHHHHHHTTTSEEEEEEECSBCSHHH---HHHHHHHHCSCHHHHHHHHHHHHHHSTTSSCBCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCCcEEEEEEeCCCcCcch---hhhhhcccccCchhhHHHHHHHHhcCCCCCCcCHHHHHHHHHH
Confidence 9999999998876544 8999999999865421 111000 000 000000001112346899999999999
Q ss_pred HccCC---CCCceEEEeCCC
Q 017914 264 SIDKP---SAWNVYNVVDDD 280 (364)
Q Consensus 264 ~l~~~---~~g~~~~i~~~~ 280 (364)
++... -.|+.+++.+|.
T Consensus 227 l~s~~~~~~tG~~i~vdGG~ 246 (264)
T 2dtx_A 227 LASREASFITGTCLYVDGGL 246 (264)
T ss_dssp HHSGGGTTCCSCEEEESTTG
T ss_pred HhCchhcCCCCcEEEECCCc
Confidence 98764 348899988773
|
| >3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.81 E-value=6.7e-19 Score=155.06 Aligned_cols=214 Identities=7% Similarity=-0.089 Sum_probs=136.8
Q ss_pred CCCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeC-chhhhhh----h---hCCceEEEccCChhhH--Hhh------
Q 017914 56 WQSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTN-VMKKKEL----E---QSGFDVHLFNANETAL--MIL------ 118 (364)
Q Consensus 56 ~~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~-~~~~~~l----~---~~~~~~~~~D~~~~~~--~~~------ 118 (364)
..++++||||| +|+||++++++|+++|++|++++|+ .+....+ . ...+.++.+|++|.+. ..+
T Consensus 22 ~l~~k~~lVTGas~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 101 (281)
T 3v2h_A 22 SMMTKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADMTKPSEIADMMAMVADR 101 (281)
T ss_dssp CCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEECCCCHHHHHHHHHHHHTTCSSCEEEECCCTTCHHHHHHHHHHHHHH
T ss_pred ccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHhhccCCcEEEEeCCCCCHHHHHHHHHHHHHH
Confidence 35568999999 9999999999999999999999994 3333222 1 2467889999999764 222
Q ss_pred -ccCceeeEEEEecCCCCCCC----ChhhhHHH------HHHHHh----hcCCccEEEEEccceeecCCCCccccCCCCC
Q 017914 119 -TTLKNYTHLLVSIPPLEGTG----DPMLKHGE------LLRSTL----MNGHLQWLGYLSSTGVYGHSGGAWVDEDYPA 183 (364)
Q Consensus 119 -~~~d~v~~~~~~~~~~~~~~----~~~~~~~~------~l~~a~----~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~ 183 (364)
..+|+++|+++......... +....... ++..++ ++.+..++|++||...+...
T Consensus 102 ~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~----------- 170 (281)
T 3v2h_A 102 FGGADILVNNAGVQFVEKIEDFPVEQWDRIIAVNLSSSFHTIRGAIPPMKKKGWGRIINIASAHGLVAS----------- 170 (281)
T ss_dssp TSSCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC-----------
T ss_pred CCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCcccccCC-----------
Confidence 36899999998644322111 11111122 223322 34556799999997654221
Q ss_pred CCCChhHHHHHHHHHHHHHhhhh---cCCcEEEEEecceecCCCCh-HHHHHHhcCcc----cccccccCCcccccccHH
Q 017914 184 NPTTELGRLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRSS-VDTIIKQLPLS----EGQKMRRARQYTSRIHVD 255 (364)
Q Consensus 184 ~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~-~~~~~~~~~~~----~~~~~~~~~~~~~~i~v~ 255 (364)
.....|+.+|...+.+.+.++.+ .|+++++++||.+.++.... ........... .......+.....+++++
T Consensus 171 ~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~e 250 (281)
T 3v2h_A 171 PFKSAYVAAKHGIMGLTKTVALEVAESGVTVNSICPGYVLTPLVEKQIPDQARTRGITEEQVINEVMLKGQPTKKFITVE 250 (281)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC----------------------------CCTTCSCBCHH
T ss_pred CCchHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEECCCCcCcchhhhcchhhhhcCCCHHHHHHHHHHhcCCCCCccCHH
Confidence 23468999999999999988755 48999999999998864221 11000000000 000112233446689999
Q ss_pred HHHHHHHHHccCCC---CCceEEEeCCC
Q 017914 256 DICQVLSASIDKPS---AWNVYNVVDDD 280 (364)
Q Consensus 256 Dva~~~~~~l~~~~---~g~~~~i~~~~ 280 (364)
|+|++++.++.... .|+++++.+|.
T Consensus 251 dvA~~v~~L~s~~a~~itG~~i~vdGG~ 278 (281)
T 3v2h_A 251 QVASLALYLAGDDAAQITGTHVSMDGGW 278 (281)
T ss_dssp HHHHHHHHHHSSGGGGCCSCEEEESTTG
T ss_pred HHHHHHHHHcCCCcCCCCCcEEEECCCc
Confidence 99999999997653 48999998873
|
| >3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.81 E-value=1.5e-18 Score=150.00 Aligned_cols=207 Identities=11% Similarity=-0.021 Sum_probs=140.6
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhh------CCceEEEccCChhhH--Hhh-------cc
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQ------SGFDVHLFNANETAL--MIL-------TT 120 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~------~~~~~~~~D~~~~~~--~~~-------~~ 120 (364)
..+|+||||| +|+||++++++|+++|++|++++|+.++...+.. ..+.++.+|++|.+. ..+ ..
T Consensus 3 l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 82 (247)
T 3lyl_A 3 LNEKVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKGFKARGLVLNISDIESIQNFFAEIKAENLA 82 (247)
T ss_dssp TTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHTTCC
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 3468999999 9999999999999999999999998776554321 467889999999764 222 25
Q ss_pred CceeeEEEEecCCCCCCC----ChhhhHHHH------HHHH----hhcCCccEEEEEccceeecCCCCccccCCCCCCCC
Q 017914 121 LKNYTHLLVSIPPLEGTG----DPMLKHGEL------LRST----LMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANPT 186 (364)
Q Consensus 121 ~d~v~~~~~~~~~~~~~~----~~~~~~~~~------l~~a----~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~ 186 (364)
+|.++|+++......... +.......| +..+ +.+.+..++|++||...+... ...
T Consensus 83 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~~ 151 (247)
T 3lyl_A 83 IDILVNNAGITRDNLMMRMSEDEWQSVINTNLSSIFRMSKECVRGMMKKRWGRIISIGSVVGSAGN-----------PGQ 151 (247)
T ss_dssp CSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCC-----------TTC
T ss_pred CCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhccCC-----------CCc
Confidence 799999997654322111 111112222 2222 223455699999997654322 134
Q ss_pred ChhHHHHHHHHHHHHHhhhh---cCCcEEEEEecceecCCCChH-HHHHHhcCcccccccccCCcccccccHHHHHHHHH
Q 017914 187 TELGRLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRSSV-DTIIKQLPLSEGQKMRRARQYTSRIHVDDICQVLS 262 (364)
Q Consensus 187 ~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~ 262 (364)
..|+.+|.+.+.+.+.++.+ .|+++++++||.+..+....+ ...... .........+.+++|+|++++
T Consensus 152 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~--------~~~~~~~~~~~~~~dva~~i~ 223 (247)
T 3lyl_A 152 TNYCAAKAGVIGFSKSLAYEVASRNITVNVVAPGFIATDMTDKLTDEQKSF--------IATKIPSGQIGEPKDIAAAVA 223 (247)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTTSCHHHHHH--------HHTTSTTCCCBCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEeeCcEecccchhccHHHHHH--------HhhcCCCCCCcCHHHHHHHHH
Confidence 68999999999999888754 489999999999987653321 111111 001112245688999999999
Q ss_pred HHccCCC---CCceEEEeCCCCC
Q 017914 263 ASIDKPS---AWNVYNVVDDDPA 282 (364)
Q Consensus 263 ~~l~~~~---~g~~~~i~~~~~~ 282 (364)
.++.... .|++|++.+|..+
T Consensus 224 ~l~s~~~~~~tG~~i~vdgG~~~ 246 (247)
T 3lyl_A 224 FLASEEAKYITGQTLHVNGGMYM 246 (247)
T ss_dssp HHHSGGGTTCCSCEEEESTTSSC
T ss_pred HHhCCCcCCccCCEEEECCCEec
Confidence 9987542 4899999887544
|
| >1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.80 E-value=2.3e-18 Score=150.58 Aligned_cols=213 Identities=10% Similarity=0.019 Sum_probs=139.3
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhh--------hCCceEEEccCChhhH--Hhh-------
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELE--------QSGFDVHLFNANETAL--MIL------- 118 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~--------~~~~~~~~~D~~~~~~--~~~------- 118 (364)
..+++||||| +|+||++++++|+++|++|++++|+.++...+. ..++.++.+|++|.+. ..+
T Consensus 11 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 90 (267)
T 1iy8_A 11 FTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTERF 90 (267)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 4568999999 999999999999999999999999876544321 2457889999999763 222
Q ss_pred ccCceeeEEEEecCCCCCCC-----ChhhhHHH----------HHHHHhhcCCccEEEEEccceeecCCCCccccCCCCC
Q 017914 119 TTLKNYTHLLVSIPPLEGTG-----DPMLKHGE----------LLRSTLMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPA 183 (364)
Q Consensus 119 ~~~d~v~~~~~~~~~~~~~~-----~~~~~~~~----------~l~~a~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~ 183 (364)
..+|+++|+++......... +....... .++..+++.+.+++|++||...+.. .
T Consensus 91 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-----------~ 159 (267)
T 1iy8_A 91 GRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIRG-----------I 159 (267)
T ss_dssp SCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSB-----------C
T ss_pred CCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhccC-----------C
Confidence 36899999987643211111 11111112 2333344456679999999764421 1
Q ss_pred CCCChhHHHHHHHHHHHHHhhhh---cCCcEEEEEecceecCCCChHHHHH-H-hcCcccc--cccccCCcccccccHHH
Q 017914 184 NPTTELGRLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRSSVDTII-K-QLPLSEG--QKMRRARQYTSRIHVDD 256 (364)
Q Consensus 184 ~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~-~-~~~~~~~--~~~~~~~~~~~~i~v~D 256 (364)
.+...|+.+|...+.+.+.++.+ .|+++++|+||.+.++.. .... . ....... ...........+.+++|
T Consensus 160 ~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~---~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~d 236 (267)
T 1iy8_A 160 GNQSGYAAAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMV---ENSMKQLDPENPRKAAEEFIQVNPSKRYGEAPE 236 (267)
T ss_dssp SSBHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHH---HHHHHHHCTTCHHHHHHHHHTTCTTCSCBCHHH
T ss_pred CCCccHHHHHHHHHHHHHHHHHHHHhcCeEEEEEEeCCCcCcch---hccccccChhhhhhHHHHHhccCCCCCCcCHHH
Confidence 13468999999999999887654 489999999999976531 1110 0 0000000 00000011234688999
Q ss_pred HHHHHHHHccCC---CCCceEEEeCCCCCC
Q 017914 257 ICQVLSASIDKP---SAWNVYNVVDDDPAP 283 (364)
Q Consensus 257 va~~~~~~l~~~---~~g~~~~i~~~~~~s 283 (364)
+|++++.++... -.|+.+++.+|..++
T Consensus 237 vA~~v~~l~s~~~~~~tG~~i~vdGG~~~~ 266 (267)
T 1iy8_A 237 IAAVVAFLLSDDASYVNATVVPIDGGQSAA 266 (267)
T ss_dssp HHHHHHHHTSGGGTTCCSCEEEESTTTTTB
T ss_pred HHHHHHHHcCccccCCCCCEEEECCCcccC
Confidence 999999998764 348999998876443
|
| >3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis} | Back alignment and structure |
|---|
Probab=99.80 E-value=2e-18 Score=149.93 Aligned_cols=210 Identities=13% Similarity=0.016 Sum_probs=142.3
Q ss_pred CCCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhh------hCCceEEEccCChhhH--Hhh-------c
Q 017914 56 WQSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELE------QSGFDVHLFNANETAL--MIL-------T 119 (364)
Q Consensus 56 ~~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~------~~~~~~~~~D~~~~~~--~~~-------~ 119 (364)
...++++|||| +|+||++++++|+++|++|++++|+.+..+.+. ...+.++.+|++|.+. ..+ .
T Consensus 9 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 88 (256)
T 3gaf_A 9 HLNDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAGGKAIGLECNVTDEQHREAVIKAALDQFG 88 (256)
T ss_dssp CCTTCEEEECSCSSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 35578999999 999999999999999999999999877654432 1467889999999764 222 3
Q ss_pred cCceeeEEEEecCCCCC-C--CChhhhHHHH------HHHH----hhcCCccEEEEEccceeecCCCCccccCCCCCCCC
Q 017914 120 TLKNYTHLLVSIPPLEG-T--GDPMLKHGEL------LRST----LMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANPT 186 (364)
Q Consensus 120 ~~d~v~~~~~~~~~~~~-~--~~~~~~~~~~------l~~a----~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~ 186 (364)
.+|+++|+++....... . .+.......| +..+ +++.+..++|++||...+.. ..+.
T Consensus 89 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~-----------~~~~ 157 (256)
T 3gaf_A 89 KITVLVNNAGGGGPKPFDMPMSDFEWAFKLNLFSLFRLSQLAAPHMQKAGGGAILNISSMAGENT-----------NVRM 157 (256)
T ss_dssp CCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTCC-----------CTTC
T ss_pred CCCEEEECCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHHcCC-----------CCCc
Confidence 78999999986543221 0 1111111222 2222 23455679999999765422 1234
Q ss_pred ChhHHHHHHHHHHHHHhhhh---cCCcEEEEEecceecCCCChH--HHHHHhcCcccccccccCCcccccccHHHHHHHH
Q 017914 187 TELGRLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRSSV--DTIIKQLPLSEGQKMRRARQYTSRIHVDDICQVL 261 (364)
Q Consensus 187 ~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~ 261 (364)
..|+.+|...+.+.+.++.+ .|++++.++||.+.++..... ...... .........+.+++|+|+++
T Consensus 158 ~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~--------~~~~~p~~r~~~~~dva~~~ 229 (256)
T 3gaf_A 158 ASYGSSKAAVNHLTRNIAFDVGPMGIRVNAIAPGAIKTDALATVLTPEIERA--------MLKHTPLGRLGEAQDIANAA 229 (256)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHCCHHHHHH--------HHTTCTTSSCBCHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEEccccCchhhhccCHHHHHH--------HHhcCCCCCCCCHHHHHHHH
Confidence 68999999999999988755 489999999999876531100 000000 00111223458899999999
Q ss_pred HHHccCC---CCCceEEEeCCCCCCH
Q 017914 262 SASIDKP---SAWNVYNVVDDDPAPR 284 (364)
Q Consensus 262 ~~~l~~~---~~g~~~~i~~~~~~s~ 284 (364)
+.++... -.|+++++.+|...++
T Consensus 230 ~~L~s~~~~~itG~~i~vdgG~~~~~ 255 (256)
T 3gaf_A 230 LFLCSPAAAWISGQVLTVSGGGVQEL 255 (256)
T ss_dssp HHHHSGGGTTCCSCEEEESTTSCCC-
T ss_pred HHHcCCcccCccCCEEEECCCccccC
Confidence 9998754 2489999999876654
|
| >3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.80 E-value=4.3e-18 Score=149.96 Aligned_cols=213 Identities=11% Similarity=-0.039 Sum_probs=138.6
Q ss_pred CCCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeC-------------chhhhhhh------hCCceEEEccCChhhH
Q 017914 56 WQSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTN-------------VMKKKELE------QSGFDVHLFNANETAL 115 (364)
Q Consensus 56 ~~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~-------------~~~~~~l~------~~~~~~~~~D~~~~~~ 115 (364)
...+++||||| +|+||++++++|+++|++|++++|+ .++.+.+. ...+.++.+|++|.+.
T Consensus 12 ~l~gk~~lVTGas~gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~ 91 (280)
T 3pgx_A 12 SLQGRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRKALTRVLDVRDDAA 91 (280)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCHHH
T ss_pred ccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHH
Confidence 45678999999 9999999999999999999999983 33322221 1357788999999764
Q ss_pred --Hhh-------ccCceeeEEEEecCCCCCCC----ChhhhHHHH------HHHHh----hcCC-ccEEEEEccceeecC
Q 017914 116 --MIL-------TTLKNYTHLLVSIPPLEGTG----DPMLKHGEL------LRSTL----MNGH-LQWLGYLSSTGVYGH 171 (364)
Q Consensus 116 --~~~-------~~~d~v~~~~~~~~~~~~~~----~~~~~~~~~------l~~a~----~~~~-~~r~v~~Ss~~vy~~ 171 (364)
..+ ..+|+++|+++......... +.......| +..++ ++.+ ..++|++||...+..
T Consensus 92 v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~ 171 (280)
T 3pgx_A 92 LRELVADGMEQFGRLDVVVANAGVLSWGRVWELTDEQWDTVIGVNLTGTWRTLRATVPAMIEAGNGGSIVVVSSSAGLKA 171 (280)
T ss_dssp HHHHHHHHHHHHCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSC
T ss_pred HHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEEcchhhccC
Confidence 222 37899999988654322111 111111222 22222 2322 568999999765422
Q ss_pred CCCccccCCCCCCCCChhHHHHHHHHHHHHHhhhh---cCCcEEEEEecceecCCCCh--HHHHHHhcC-cccccccccC
Q 017914 172 SGGAWVDEDYPANPTTELGRLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRSS--VDTIIKQLP-LSEGQKMRRA 245 (364)
Q Consensus 172 ~~~~~~~E~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~--~~~~~~~~~-~~~~~~~~~~ 245 (364)
. .....|+.+|...+.+.+.++.+ .|+++++|+||.+.++.... ......... .........
T Consensus 172 ~-----------~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~- 239 (280)
T 3pgx_A 172 T-----------PGNGHYSASKHGLTALTNTLAIELGEYGIRVNSIHPYSVETPMIEPEAMMEIFARHPSFVHSFPPMP- 239 (280)
T ss_dssp C-----------TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCCHHHHHHHHHHCGGGGGGSCCBT-
T ss_pred C-----------CCchhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccCcccchhhhhhhhhcCchhhhhhhhcc-
Confidence 2 13468999999999999988765 58999999999999876442 111111111 111000111
Q ss_pred CcccccccHHHHHHHHHHHccCCC---CCceEEEeCCC
Q 017914 246 RQYTSRIHVDDICQVLSASIDKPS---AWNVYNVVDDD 280 (364)
Q Consensus 246 ~~~~~~i~v~Dva~~~~~~l~~~~---~g~~~~i~~~~ 280 (364)
.....+++++|+|++++.++.... .|+++++.+|.
T Consensus 240 ~~~~r~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG~ 277 (280)
T 3pgx_A 240 VQPNGFMTADEVADVVAWLAGDGSGTLTGTQIPVDKGA 277 (280)
T ss_dssp TBCSSCBCHHHHHHHHHHHHSGGGTTCSSCEEEESTTG
T ss_pred cCCCCCCCHHHHHHHHHHHhCccccCCCCCEEEECCCc
Confidence 111237899999999999987543 48999998763
|
| >1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.80 E-value=6.1e-19 Score=153.02 Aligned_cols=207 Identities=11% Similarity=0.000 Sum_probs=138.9
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhh---CCceEEEccCChhhH--Hhh-------ccCce
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQ---SGFDVHLFNANETAL--MIL-------TTLKN 123 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~---~~~~~~~~D~~~~~~--~~~-------~~~d~ 123 (364)
..+++||||| +|+||++++++|+++|++|++++|+.++...+.+ .++.++.+|++|.+. ..+ ..+|+
T Consensus 4 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~ 83 (253)
T 1hxh_A 4 LQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGERSMFVRHDVSSEADWTLVMAAVQRRLGTLNV 83 (253)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCTTEEEECCCTTCHHHHHHHHHHHHHHHCSCCE
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 4568999999 9999999999999999999999998766554322 467889999999763 222 35799
Q ss_pred eeEEEEecCCCCCCC----ChhhhHH----------HHHHHHhhcCCccEEEEEccceeecCCCCccccCCCCCCCCChh
Q 017914 124 YTHLLVSIPPLEGTG----DPMLKHG----------ELLRSTLMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANPTTEL 189 (364)
Q Consensus 124 v~~~~~~~~~~~~~~----~~~~~~~----------~~l~~a~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y 189 (364)
++|+++......... +...... +.++..+++.+ +++|++||...+... .+...|
T Consensus 84 lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~-----------~~~~~Y 151 (253)
T 1hxh_A 84 LVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETG-GSIINMASVSSWLPI-----------EQYAGY 151 (253)
T ss_dssp EEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTC-EEEEEECCGGGTSCC-----------TTBHHH
T ss_pred EEECCCCCCCCCcccCCHHHHHHHHHhhcHHHHHHHHHHHHHHHHcC-CEEEEEcchhhcCCC-----------CCCccH
Confidence 999998643321111 1111111 23334444556 899999998655321 234689
Q ss_pred HHHHHHHHHHHHHhhhh---c--CCcEEEEEecceecCCCChHHHHHHhcCccccccccc---CCcccccccHHHHHHHH
Q 017914 190 GRLRLSAEKGWLNLGRD---L--GISAQVFRLGGIYGPGRSSVDTIIKQLPLSEGQKMRR---ARQYTSRIHVDDICQVL 261 (364)
Q Consensus 190 ~~sK~~~E~~~~~~~~~---~--~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~i~v~Dva~~~ 261 (364)
+.+|...|.+.+.++.+ . |++++++|||.++++... ..... .... ..+.. ......+.+++|+|+++
T Consensus 152 ~~sK~a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~~~---~~~~~-~~~~-~~~~~~~~~~p~~~~~~~~dvA~~~ 226 (253)
T 1hxh_A 152 SASKAAVSALTRAAALSCRKQGYAIRVNSIHPDGIYTPMMQ---ASLPK-GVSK-EMVLHDPKLNRAGRAYMPERIAQLV 226 (253)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESEECCHHHH---HHSCT-TCCH-HHHBCBTTTBTTCCEECHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhhcCCCeEEEEEEeCCccCchhh---hccch-hhhH-HHHhhhhccCccCCCCCHHHHHHHH
Confidence 99999999999888754 3 899999999999875311 10000 0000 00000 01123468899999999
Q ss_pred HHHccCC---CCCceEEEeCCC
Q 017914 262 SASIDKP---SAWNVYNVVDDD 280 (364)
Q Consensus 262 ~~~l~~~---~~g~~~~i~~~~ 280 (364)
+.++..+ -.|+.+++.+|.
T Consensus 227 ~~l~s~~~~~~tG~~~~vdgG~ 248 (253)
T 1hxh_A 227 LFLASDESSVMSGSELHADNSI 248 (253)
T ss_dssp HHHHSGGGTTCCSCEEEESSSC
T ss_pred HHHcCccccCCCCcEEEECCCc
Confidence 9998764 348899998774
|
| >3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str} | Back alignment and structure |
|---|
Probab=99.80 E-value=1.6e-18 Score=150.74 Aligned_cols=212 Identities=10% Similarity=-0.007 Sum_probs=140.0
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhh------CCceEEEccCChhhH--Hhh-------cc
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQ------SGFDVHLFNANETAL--MIL-------TT 120 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~------~~~~~~~~D~~~~~~--~~~-------~~ 120 (364)
..+++||||| +|+||++++++|+++|++|++++|+.++...+.. .++.++.+|++|.+. ..+ ..
T Consensus 4 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 83 (257)
T 3imf_A 4 MKEKVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQFPGQILTVQMDVRNTDDIQKMIEQIDEKFGR 83 (257)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCSTTCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 4568999999 9999999999999999999999998876554321 357889999999763 222 36
Q ss_pred CceeeEEEEecCCCCCCC----ChhhhHHHHH------HHHh-----hcCCccEEEEEccceeecCCCCccccCCCCCCC
Q 017914 121 LKNYTHLLVSIPPLEGTG----DPMLKHGELL------RSTL-----MNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANP 185 (364)
Q Consensus 121 ~d~v~~~~~~~~~~~~~~----~~~~~~~~~l------~~a~-----~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~ 185 (364)
+|+++|+++......... +.......|+ ..++ +..+..++|++||...+... ..
T Consensus 84 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~ 152 (257)
T 3imf_A 84 IDILINNAAGNFICPAEDLSVNGWNSVINIVLNGTFYCSQAIGKYWIEKGIKGNIINMVATYAWDAG-----------PG 152 (257)
T ss_dssp CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGGSCC-----------TT
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhCCCcEEEEECchhhccCC-----------CC
Confidence 899999987543321111 1111122232 2222 33446799999987654221 23
Q ss_pred CChhHHHHHHHHHHHHHhhh----hcCCcEEEEEecceecCCCChHHHHHHhcCcccccccccCCcccccccHHHHHHHH
Q 017914 186 TTELGRLRLSAEKGWLNLGR----DLGISAQVFRLGGIYGPGRSSVDTIIKQLPLSEGQKMRRARQYTSRIHVDDICQVL 261 (364)
Q Consensus 186 ~~~Y~~sK~~~E~~~~~~~~----~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~ 261 (364)
...|+.+|...+.+.+.++. ..|+++++|+||.+.++.......... .... ..........+.+++|+|+++
T Consensus 153 ~~~Y~asKaa~~~l~~~la~e~~~~~gIrvn~v~PG~v~t~~~~~~~~~~~--~~~~--~~~~~~p~~r~~~pedvA~~v 228 (257)
T 3imf_A 153 VIHSAAAKAGVLAMTKTLAVEWGRKYGIRVNAIAPGPIERTGGADKLWISE--EMAK--RTIQSVPLGRLGTPEEIAGLA 228 (257)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCBSSCCCC---------CCSH--HHHTTSTTCSCBCHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHhccccCeEEEEEEECCCcCCcchhhcccCH--HHHH--HHHhcCCCCCCcCHHHHHHHH
Confidence 46899999999999988764 348999999999998774221000000 0000 000011123457899999999
Q ss_pred HHHccCCC---CCceEEEeCCCCCC
Q 017914 262 SASIDKPS---AWNVYNVVDDDPAP 283 (364)
Q Consensus 262 ~~~l~~~~---~g~~~~i~~~~~~s 283 (364)
+.++.... .|+.+++.+|..++
T Consensus 229 ~~L~s~~~~~itG~~i~vdGG~~~~ 253 (257)
T 3imf_A 229 YYLCSDEAAYINGTCMTMDGGQHLH 253 (257)
T ss_dssp HHHHSGGGTTCCSCEEEESTTTTSC
T ss_pred HHHcCchhcCccCCEEEECCCcccC
Confidence 99987653 48999999887654
|
| >4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=99.80 E-value=3.8e-18 Score=149.88 Aligned_cols=214 Identities=10% Similarity=-0.064 Sum_probs=142.3
Q ss_pred CCCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhh---CCceEEEccCChhhH--Hhh-------ccCc
Q 017914 56 WQSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQ---SGFDVHLFNANETAL--MIL-------TTLK 122 (364)
Q Consensus 56 ~~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~---~~~~~~~~D~~~~~~--~~~-------~~~d 122 (364)
...+++||||| +|+||++++++|+++|++|++++|+.+....+.. ..+.++.+|++|.+. ..+ ..+|
T Consensus 24 ~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD 103 (277)
T 4dqx_A 24 DLNQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEIGSKAFGVRVDVSSAKDAESMVEKTTAKWGRVD 103 (277)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence 34568999999 9999999999999999999999998776554432 467889999999764 222 3789
Q ss_pred eeeEEEEecCCCCCCCChhh----hHHHHH----------HHHhhcCCccEEEEEccceeecCCCCccccCCCCCCCCCh
Q 017914 123 NYTHLLVSIPPLEGTGDPML----KHGELL----------RSTLMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANPTTE 188 (364)
Q Consensus 123 ~v~~~~~~~~~~~~~~~~~~----~~~~~l----------~~a~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~ 188 (364)
+++|+++............. ....|+ +..+++.+..++|++||...+... .+...
T Consensus 104 ~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~~~~ 172 (277)
T 4dqx_A 104 VLVNNAGFGTTGNVVTIPEETWDRIMSVNVKGIFLCSKYVIPVMRRNGGGSIINTTSYTATSAI-----------ADRTA 172 (277)
T ss_dssp EEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECCGGGTSCC-----------TTBHH
T ss_pred EEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECchhhCcCC-----------CCChh
Confidence 99999986443221111111 112232 222345566799999997655322 23468
Q ss_pred hHHHHHHHHHHHHHhhhh---cCCcEEEEEecceecCCCChHHHHHHhcCcc--cccccccCCcccccccHHHHHHHHHH
Q 017914 189 LGRLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRSSVDTIIKQLPLS--EGQKMRRARQYTSRIHVDDICQVLSA 263 (364)
Q Consensus 189 Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~i~v~Dva~~~~~ 263 (364)
|+.+|.+.+.+.+.++.+ .|+++++++||.+.++. ........... .............+.+++|+|++++.
T Consensus 173 Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~---~~~~~~~~~~~~~~~~~~~~~~~~~r~~~pedvA~~v~~ 249 (277)
T 4dqx_A 173 YVASKGAISSLTRAMAMDHAKEGIRVNAVAPGTIDSPY---FTKIFAEAKDPAKLRSDFNARAVMDRMGTAEEIAEAMLF 249 (277)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHH---HHHHHHTCSCHHHHHHHHHTTSTTCSCBCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCch---hhhhcccccchhHHHHHHHhcCcccCCcCHHHHHHHHHH
Confidence 999999999999888754 38999999999987642 11111100000 00001111122345789999999999
Q ss_pred HccCCC---CCceEEEeCCCCCC
Q 017914 264 SIDKPS---AWNVYNVVDDDPAP 283 (364)
Q Consensus 264 ~l~~~~---~g~~~~i~~~~~~s 283 (364)
++.... .|+++++.+|..++
T Consensus 250 L~s~~~~~itG~~i~vdGG~~~~ 272 (277)
T 4dqx_A 250 LASDRSRFATGSILTVDGGSSIG 272 (277)
T ss_dssp HHSGGGTTCCSCEEEESSSSSSC
T ss_pred HhCCccCCCcCCEEEECCchhhh
Confidence 987543 48999999886543
|
| >3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A | Back alignment and structure |
|---|
Probab=99.80 E-value=9.3e-19 Score=152.84 Aligned_cols=206 Identities=11% Similarity=-0.055 Sum_probs=135.4
Q ss_pred CCCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhh---hCCceEEEccCChhhH--Hhh-------ccCc
Q 017914 56 WQSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELE---QSGFDVHLFNANETAL--MIL-------TTLK 122 (364)
Q Consensus 56 ~~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~---~~~~~~~~~D~~~~~~--~~~-------~~~d 122 (364)
...+++||||| +|+||+++++.|+++|++|++.+|+.++...+. ..++.++.+|++|.+. ..+ ..+|
T Consensus 24 ~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD 103 (266)
T 3grp_A 24 KLTGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADLGKDVFVFSANLSDRKSIKQLAEVAEREMEGID 103 (266)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCSSEEEEECCTTSHHHHHHHHHHHHHHHTSCC
T ss_pred ccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEeecCCHHHHHHHHHHHHHHcCCCC
Confidence 45678999999 999999999999999999999999877655442 2467899999999764 222 3789
Q ss_pred eeeEEEEecCCCCCCCCh----hhhHHHH----------HHHHhhcCCccEEEEEccceeecCCCCccccCCCCCCCCCh
Q 017914 123 NYTHLLVSIPPLEGTGDP----MLKHGEL----------LRSTLMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANPTTE 188 (364)
Q Consensus 123 ~v~~~~~~~~~~~~~~~~----~~~~~~~----------l~~a~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~ 188 (364)
+++|+++........... ......| ++..+.+.+..++|++||...+... .+...
T Consensus 104 ~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~Iv~isS~~~~~~~-----------~~~~~ 172 (266)
T 3grp_A 104 ILVNNAGITRDGLFVRMQDQDWDDVLAVNLTAASTLTRELIHSMMRRRYGRIINITSIVGVVGN-----------PGQTN 172 (266)
T ss_dssp EEEECCCCC-----CCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCC------------------CHHH
T ss_pred EEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEEECCHHHcCCC-----------CCchh
Confidence 999999865432111111 1111222 2223334556799999997654221 13368
Q ss_pred hHHHHHHHHHHHHHhhhh---cCCcEEEEEecceecCCCC-hHHHHHHhcCcccccccccCCcccccccHHHHHHHHHHH
Q 017914 189 LGRLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRS-SVDTIIKQLPLSEGQKMRRARQYTSRIHVDDICQVLSAS 264 (364)
Q Consensus 189 Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~ 264 (364)
|+.+|.+.+.+.+.++.+ .|+++++++||.+.++... ........ .........+.+++|+|++++.+
T Consensus 173 Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~--------~~~~~p~~r~~~~edvA~~v~~L 244 (266)
T 3grp_A 173 YCAAKAGLIGFSKALAQEIASRNITVNCIAPGFIKSAMTDKLNEKQKEA--------IMAMIPMKRMGIGEEIAFATVYL 244 (266)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHHHHTCCHHHHHH--------HHTTCTTCSCBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCcCCCchhhccCHHHHHH--------HHhcCCCCCCcCHHHHHHHHHHH
Confidence 999999999999888754 4899999999998765211 00111110 00111123457799999999999
Q ss_pred ccCCC---CCceEEEeCCC
Q 017914 265 IDKPS---AWNVYNVVDDD 280 (364)
Q Consensus 265 l~~~~---~g~~~~i~~~~ 280 (364)
+.... .|+++++.+|.
T Consensus 245 ~s~~~~~itG~~i~vdGG~ 263 (266)
T 3grp_A 245 ASDEAAYLTGQTLHINGGM 263 (266)
T ss_dssp HSGGGTTCCSCEEEESTTC
T ss_pred hCccccCccCCEEEECCCe
Confidence 87542 48999998874
|
| >3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.80 E-value=1.8e-18 Score=150.47 Aligned_cols=208 Identities=10% Similarity=0.025 Sum_probs=134.9
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhh---CCceEEEccCChhhH--Hhh-------ccCce
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQ---SGFDVHLFNANETAL--MIL-------TTLKN 123 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~---~~~~~~~~D~~~~~~--~~~-------~~~d~ 123 (364)
..++++|||| +|+||++++++|+++|++|++++|+.+....... ..+.++.+|++|.+. ..+ ..+|+
T Consensus 5 l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~ 84 (257)
T 3tpc_A 5 LKSRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAELGAAVRFRNADVTNEADATAALAFAKQEFGHVHG 84 (257)
T ss_dssp CTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSCC------------CEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 4468999999 9999999999999999999999998766544322 367889999999764 222 37899
Q ss_pred eeEEEEecCCCCCC--------CChhhhHHHHH------HHHhh----c------CCccEEEEEccceeecCCCCccccC
Q 017914 124 YTHLLVSIPPLEGT--------GDPMLKHGELL------RSTLM----N------GHLQWLGYLSSTGVYGHSGGAWVDE 179 (364)
Q Consensus 124 v~~~~~~~~~~~~~--------~~~~~~~~~~l------~~a~~----~------~~~~r~v~~Ss~~vy~~~~~~~~~E 179 (364)
++|+++........ .+.......|+ ..++. + .+..++|++||...+....
T Consensus 85 lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~~~g~iv~isS~~~~~~~~------ 158 (257)
T 3tpc_A 85 LVNCAGTAPGEKILGRSGPHALDSFARTVAVNLIGTFNMIRLAAEVMSQGEPDADGERGVIVNTASIAAFDGQI------ 158 (257)
T ss_dssp EEECCCCCCCCCSEETTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCCT------
T ss_pred EEECCCCCCCCccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccccCCCCCeEEEEEechhhccCCC------
Confidence 99999865432211 11111122232 22222 2 2456899999977653322
Q ss_pred CCCCCCCChhHHHHHHHHHHHHHhhhh---cCCcEEEEEecceecCCCChHH-HHHHhcCcccccccccCCcc-cccccH
Q 017914 180 DYPANPTTELGRLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRSSVD-TIIKQLPLSEGQKMRRARQY-TSRIHV 254 (364)
Q Consensus 180 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~i~v 254 (364)
+...|+.+|...+.+.+.++.+ .|+++++++||.+.++...... ..... + ...... ..+.++
T Consensus 159 -----~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~--~------~~~~p~~~r~~~~ 225 (257)
T 3tpc_A 159 -----GQAAYAASKGGVAALTLPAARELARFGIRVVTIAPGIFDTPMMAGMPQDVQDA--L------AASVPFPPRLGRA 225 (257)
T ss_dssp -----TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSCC----------------------CCSSSSCSCBCH
T ss_pred -----CCcchHHHHHHHHHHHHHHHHHHHHcCeEEEEEEeCCCCChhhccCCHHHHHH--H------HhcCCCCCCCCCH
Confidence 3468999999999998888765 6899999999999876532111 00000 0 000111 345889
Q ss_pred HHHHHHHHHHccCC-CCCceEEEeCCCCCC
Q 017914 255 DDICQVLSASIDKP-SAWNVYNVVDDDPAP 283 (364)
Q Consensus 255 ~Dva~~~~~~l~~~-~~g~~~~i~~~~~~s 283 (364)
+|+|++++.+++.. -.|+++++.+|..++
T Consensus 226 ~dva~~v~~l~s~~~itG~~i~vdGG~~~~ 255 (257)
T 3tpc_A 226 EEYAALVKHICENTMLNGEVIRLDGALRMA 255 (257)
T ss_dssp HHHHHHHHHHHHCTTCCSCEEEESTTCCC-
T ss_pred HHHHHHHHHHcccCCcCCcEEEECCCccCC
Confidence 99999999999764 348999998886554
|
| >3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium} | Back alignment and structure |
|---|
Probab=99.80 E-value=1e-18 Score=152.95 Aligned_cols=211 Identities=8% Similarity=-0.058 Sum_probs=138.3
Q ss_pred cCCCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCChhhH--Hhh-------ccCcee
Q 017914 55 EWQSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETAL--MIL-------TTLKNY 124 (364)
Q Consensus 55 ~~~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~--~~~-------~~~d~v 124 (364)
....+++||||| +|+||++++++|+++|++|++++|+.+... ..+..+.+|++|.+. ..+ ..+|++
T Consensus 10 ~~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~----~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~l 85 (269)
T 3vtz_A 10 EEFTDKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSDV----NVSDHFKIDVTNEEEVKEAVEKTTKKYGRIDIL 85 (269)
T ss_dssp CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCC--CT----TSSEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhcc----CceeEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 356679999999 999999999999999999999999876542 356789999999763 222 378999
Q ss_pred eEEEEecCCCCCCCChhh----hHHHHHH------HH----hhcCCccEEEEEccceeecCCCCccccCCCCCCCCChhH
Q 017914 125 THLLVSIPPLEGTGDPML----KHGELLR------ST----LMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANPTTELG 190 (364)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~----~~~~~l~------~a----~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~ 190 (364)
+|+++............. ....|+. .+ ++..+..++|++||...+... .....|+
T Consensus 86 v~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~~~~Y~ 154 (269)
T 3vtz_A 86 VNNAGIEQYSPLHLTPTEIWRRIIDVNVNGSYLMAKYTIPVMLAIGHGSIINIASVQSYAAT-----------KNAAAYV 154 (269)
T ss_dssp EECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSBC-----------TTCHHHH
T ss_pred EECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhccCC-----------CCChhHH
Confidence 999986443221111111 1122222 22 234456799999998765322 2346899
Q ss_pred HHHHHHHHHHHHhhhhc--CCcEEEEEecceecCCCChHHHHHHhcCc---c-cccccccCCcccccccHHHHHHHHHHH
Q 017914 191 RLRLSAEKGWLNLGRDL--GISAQVFRLGGIYGPGRSSVDTIIKQLPL---S-EGQKMRRARQYTSRIHVDDICQVLSAS 264 (364)
Q Consensus 191 ~sK~~~E~~~~~~~~~~--~~~~~ilRp~~v~g~~~~~~~~~~~~~~~---~-~~~~~~~~~~~~~~i~v~Dva~~~~~~ 264 (364)
.+|.+.+.+.+.++.+. ++++++|+||.+.++.............. . .............+.+++|+|++++.+
T Consensus 155 asKaa~~~l~~~la~e~~~~i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L 234 (269)
T 3vtz_A 155 TSKHALLGLTRSVAIDYAPKIRCNAVCPGTIMTPMVIKAAKMEVGEDENAVERKIEEWGRQHPMGRIGRPEEVAEVVAFL 234 (269)
T ss_dssp HHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCCHHHHHHHHHHHCCSTTHHHHHHHHHHHHSTTSSCBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCCCEEEEEEECCCcCcchhhhhhccccccchhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHH
Confidence 99999999999987665 79999999999986531110000000000 0 000001111223457899999999999
Q ss_pred ccCC---CCCceEEEeCCC
Q 017914 265 IDKP---SAWNVYNVVDDD 280 (364)
Q Consensus 265 l~~~---~~g~~~~i~~~~ 280 (364)
+... -.|+++++.+|.
T Consensus 235 ~s~~~~~itG~~i~vdGG~ 253 (269)
T 3vtz_A 235 ASDRSSFITGACLTVDGGL 253 (269)
T ss_dssp HSGGGTTCCSCEEEESTTG
T ss_pred hCCccCCCcCcEEEECCCc
Confidence 8754 348999998874
|
| >2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A* | Back alignment and structure |
|---|
Probab=99.80 E-value=1.2e-18 Score=151.73 Aligned_cols=212 Identities=11% Similarity=-0.034 Sum_probs=138.4
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhh------hCCceEEEccCChhhH--Hhh--------c
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELE------QSGFDVHLFNANETAL--MIL--------T 119 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~------~~~~~~~~~D~~~~~~--~~~--------~ 119 (364)
..+++||||| +|+||++++++|+++|++|++++|+.+....+. ..++.++.+|++|.+. ..+ .
T Consensus 7 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g 86 (260)
T 2ae2_A 7 LEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHFHG 86 (260)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHTTT
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 4568999999 999999999999999999999999876544321 1357788999999763 222 4
Q ss_pred cCceeeEEEEecCCCCCCC----ChhhhHHH------HHHHHh----hcCCccEEEEEccceeecCCCCccccCCCCCCC
Q 017914 120 TLKNYTHLLVSIPPLEGTG----DPMLKHGE------LLRSTL----MNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANP 185 (364)
Q Consensus 120 ~~d~v~~~~~~~~~~~~~~----~~~~~~~~------~l~~a~----~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~ 185 (364)
.+|+++|+++......... +....... ++..++ ++.+.+++|++||...+.. ..+
T Consensus 87 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-----------~~~ 155 (260)
T 2ae2_A 87 KLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGALA-----------VPY 155 (260)
T ss_dssp CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGTSC-----------CTT
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccC-----------CCC
Confidence 6899999997643221111 11111112 233333 3456789999999765422 123
Q ss_pred CChhHHHHHHHHHHHHHhhhhc---CCcEEEEEecceecCCCChHHHHHHhcCccc-ccccccCCcccccccHHHHHHHH
Q 017914 186 TTELGRLRLSAEKGWLNLGRDL---GISAQVFRLGGIYGPGRSSVDTIIKQLPLSE-GQKMRRARQYTSRIHVDDICQVL 261 (364)
Q Consensus 186 ~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~v~Dva~~~ 261 (364)
...|+.+|...|.+.+.++.+. |+++++++||.+.++.. ..+........ ............+++++|+|+++
T Consensus 156 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~v 232 (260)
T 2ae2_A 156 EAVYGATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLV---EMTIQDPEQKENLNKLIDRCALRRMGEPKELAAMV 232 (260)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSHHH---HHHTTSHHHHHHHHHHHHTSTTCSCBCHHHHHHHH
T ss_pred cchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCCCCCcch---hhhccChhhHHHHHHHHhcCCCCCCCCHHHHHHHH
Confidence 4689999999999999887553 89999999999876421 10000000000 00000011123468999999999
Q ss_pred HHHccCC---CCCceEEEeCCCCC
Q 017914 262 SASIDKP---SAWNVYNVVDDDPA 282 (364)
Q Consensus 262 ~~~l~~~---~~g~~~~i~~~~~~ 282 (364)
+.++... -.|+++++.+|..+
T Consensus 233 ~~l~s~~~~~~tG~~~~vdgG~~~ 256 (260)
T 2ae2_A 233 AFLCFPAASYVTGQIIYVDGGLMA 256 (260)
T ss_dssp HHHHSGGGTTCCSCEEEESTTGGG
T ss_pred HHHcCccccCCCCCEEEECCCccc
Confidence 9988754 34899999887543
|
| >1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.80 E-value=1.7e-18 Score=149.87 Aligned_cols=205 Identities=11% Similarity=-0.041 Sum_probs=136.7
Q ss_pred CCCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCCh-hh-H-HhhccCceeeEEEEec
Q 017914 56 WQSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANE-TA-L-MILTTLKNYTHLLVSI 131 (364)
Q Consensus 56 ~~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~-~~-~-~~~~~~d~v~~~~~~~ 131 (364)
...+++||||| +|+||++++++|+++|++|++++|+.+....+ ..+.++ +|+.+ .+ . ..+..+|+++|+++..
T Consensus 16 ~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~--~~~~~~-~D~~~~~~~~~~~~~~iD~lv~~Ag~~ 92 (249)
T 1o5i_A 16 GIRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKRS--GHRYVV-CDLRKDLDLLFEKVKEVDILVLNAGGP 92 (249)
T ss_dssp CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHT--CSEEEE-CCTTTCHHHHHHHSCCCSEEEECCCCC
T ss_pred ccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHhh--CCeEEE-eeHHHHHHHHHHHhcCCCEEEECCCCC
Confidence 46678999999 99999999999999999999999987544443 245666 99932 11 1 3334789999999754
Q ss_pred CCCCCCCCh----hhhHH----------HHHHHHhhcCCccEEEEEccceeecCCCCccccCCCCCCCCChhHHHHHHHH
Q 017914 132 PPLEGTGDP----MLKHG----------ELLRSTLMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANPTTELGRLRLSAE 197 (364)
Q Consensus 132 ~~~~~~~~~----~~~~~----------~~l~~a~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~~sK~~~E 197 (364)
......... ..... +.++..+++.+.+++|++||...+... .+...|+.+|...+
T Consensus 93 ~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~~~~Y~~sK~a~~ 161 (249)
T 1o5i_A 93 KAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSVISPI-----------ENLYTSNSARMALT 161 (249)
T ss_dssp CCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC-----------TTBHHHHHHHHHHH
T ss_pred CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchHhcCCC-----------CCCchHHHHHHHHH
Confidence 322111111 11111 233444445567899999998766432 13468999999999
Q ss_pred HHHHHhhhh---cCCcEEEEEecceecCCCChH-HHHHHhcCcccccccccCCcccccccHHHHHHHHHHHccCC---CC
Q 017914 198 KGWLNLGRD---LGISAQVFRLGGIYGPGRSSV-DTIIKQLPLSEGQKMRRARQYTSRIHVDDICQVLSASIDKP---SA 270 (364)
Q Consensus 198 ~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~---~~ 270 (364)
.+.+.++.+ .|+++++++||.+.++..... ...... .+.. ......+.+++|+|++++.++... ..
T Consensus 162 ~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~-~~~~------~~p~~~~~~~~dvA~~i~~l~s~~~~~~t 234 (249)
T 1o5i_A 162 GFLKTLSFEVAPYGITVNCVAPGWTETERVKELLSEEKKK-QVES------QIPMRRMAKPEEIASVVAFLCSEKASYLT 234 (249)
T ss_dssp HHHHHHHHHHGGGTEEEEEEEECSBCCTTHHHHSCHHHHH-HHHT------TSTTSSCBCHHHHHHHHHHHHSGGGTTCC
T ss_pred HHHHHHHHHhhhcCeEEEEEeeCCCccCcccccchhhHHH-HHHh------cCCCCCCcCHHHHHHHHHHHcCccccCCC
Confidence 999887654 589999999999988752111 001000 0000 011134688999999999988754 24
Q ss_pred CceEEEeCCCC
Q 017914 271 WNVYNVVDDDP 281 (364)
Q Consensus 271 g~~~~i~~~~~ 281 (364)
|+.|++.+|..
T Consensus 235 G~~~~vdgG~~ 245 (249)
T 1o5i_A 235 GQTIVVDGGLS 245 (249)
T ss_dssp SCEEEESTTCC
T ss_pred CCEEEECCCcc
Confidence 89999988753
|
| >2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=99.80 E-value=1e-18 Score=149.77 Aligned_cols=183 Identities=10% Similarity=-0.024 Sum_probs=122.8
Q ss_pred CCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhh--CCceEEEccCChhhH--Hhh-------ccCceee
Q 017914 58 SPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQ--SGFDVHLFNANETAL--MIL-------TTLKNYT 125 (364)
Q Consensus 58 ~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~--~~~~~~~~D~~~~~~--~~~-------~~~d~v~ 125 (364)
++++||||| +|+||++++++|+++|++|++++|+.++...+.. .++.++.+|++|.+. ..+ ..+|+++
T Consensus 4 ~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li 83 (234)
T 2ehd_A 4 MKGAVLITGASRGIGEATARLLHAKGYRVGLMARDEKRLQALAAELEGALPLPGDVREEGDWARAVAAMEEAFGELSALV 83 (234)
T ss_dssp CCCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHHHHHHHHSCCCEEE
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhhceEEEecCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 357899999 9999999999999999999999998776554432 268899999999663 222 3689999
Q ss_pred EEEEecCCCCCCC----ChhhhHH----------HHHHHHhhcCCccEEEEEccceeecCCCCccccCCCCCCCCChhHH
Q 017914 126 HLLVSIPPLEGTG----DPMLKHG----------ELLRSTLMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANPTTELGR 191 (364)
Q Consensus 126 ~~~~~~~~~~~~~----~~~~~~~----------~~l~~a~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~~ 191 (364)
|+++......... +...... +.++..+++.+.+++|++||...+.. ..+...|+.
T Consensus 84 ~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~-----------~~~~~~Y~~ 152 (234)
T 2ehd_A 84 NNAGVGVMKPVHELTLEEWRLVLDTNLTGAFLGIRHAVPALLRRGGGTIVNVGSLAGKNP-----------FKGGAAYNA 152 (234)
T ss_dssp ECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCTTTTSC-----------CTTCHHHHH
T ss_pred ECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEECCchhcCC-----------CCCCchhhH
Confidence 9997543221111 1111111 23344445667789999999765432 124468999
Q ss_pred HHHHHHHHHHHhhhh---cCCcEEEEEecceecCCCChHHHHHHhcCcccccccccCCcccccccHHHHHHHHHHHccCC
Q 017914 192 LRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRSSVDTIIKQLPLSEGQKMRRARQYTSRIHVDDICQVLSASIDKP 268 (364)
Q Consensus 192 sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~ 268 (364)
+|...|.+++.++.+ .|++++++|||.+..+..... .. . ..+++.+|+|++++.++..+
T Consensus 153 sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~---------~~--~-------~~~~~~~dvA~~~~~l~~~~ 214 (234)
T 2ehd_A 153 SKFGLLGLAGAAMLDLREANVRVVNVLPGSVDTGFAGNT---------PG--Q-------AWKLKPEDVAQAVLFALEMP 214 (234)
T ss_dssp HHHHHHHHHHHHHHHHGGGTEEEEEEECC----------------------------------CCHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCCccccc---------cc--c-------cCCCCHHHHHHHHHHHhCCC
Confidence 999999988877643 589999999998865431100 00 0 11478999999999999875
Q ss_pred C
Q 017914 269 S 269 (364)
Q Consensus 269 ~ 269 (364)
.
T Consensus 215 ~ 215 (234)
T 2ehd_A 215 G 215 (234)
T ss_dssp C
T ss_pred c
Confidence 3
|
| >3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=99.80 E-value=2.6e-18 Score=150.00 Aligned_cols=196 Identities=8% Similarity=-0.004 Sum_probs=134.4
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCChhhH--Hhh-------ccCceeeE
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETAL--MIL-------TTLKNYTH 126 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~--~~~-------~~~d~v~~ 126 (364)
.++++||||| +|+||++++++|+++|++|++++|+.++...+...++.++.+|++|.+. ..+ ..+|+++|
T Consensus 14 ~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvn 93 (266)
T 3p19_A 14 SMKKLVVITGASSGIGEAIARRFSEEGHPLLLLARRVERLKALNLPNTLCAQVDVTDKYTFDTAITRAEKIYGPADAIVN 93 (266)
T ss_dssp -CCCEEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHTTCCTTEEEEECCTTCHHHHHHHHHHHHHHHCSEEEEEE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHhhcCCceEEEecCCCHHHHHHHHHHHHHHCCCCCEEEE
Confidence 4568999999 9999999999999999999999999887776655678899999999663 222 36899999
Q ss_pred EEEecCCCCCCCChhh----hHHHH----------HHHHhhcCCccEEEEEccceeecCCCCccccCCCCCCCCChhHHH
Q 017914 127 LLVSIPPLEGTGDPML----KHGEL----------LRSTLMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANPTTELGRL 192 (364)
Q Consensus 127 ~~~~~~~~~~~~~~~~----~~~~~----------l~~a~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~~s 192 (364)
+++............. ....| ++..+++.+..++|++||...+... .....|+.+
T Consensus 94 nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~-----------~~~~~Y~as 162 (266)
T 3p19_A 94 NAGMMLLGQIDTQEANEWQRMFDVNVLGLLNGMQAVLAPMKARNCGTIINISSIAGKKTF-----------PDHAAYCGT 162 (266)
T ss_dssp CCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCC-----------TTCHHHHHH
T ss_pred CCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhCCCC-----------CCCchHHHH
Confidence 9986543221111111 12222 2222334566799999997654221 234689999
Q ss_pred HHHHHHHHHHhhhh---cCCcEEEEEecceecCCCChH--HHHHHhcCcccccccccCCcccccccHHHHHHHHHHHccC
Q 017914 193 RLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRSSV--DTIIKQLPLSEGQKMRRARQYTSRIHVDDICQVLSASIDK 267 (364)
Q Consensus 193 K~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~ 267 (364)
|...+.+.+.++.+ .|+++++|+||.+.++..... ....... ... ......+++++|+|++++.++++
T Consensus 163 K~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~--~~~-----~~~~~r~~~pedvA~av~~l~~~ 235 (266)
T 3p19_A 163 KFAVHAISENVREEVAASNVRVMTIAPSAVKTELLSHTTSQQIKDGY--DAW-----RVDMGGVLAADDVARAVLFAYQQ 235 (266)
T ss_dssp HHHHHHHHHHHHHHHGGGTCEEEEEEECSBSSSGGGGCSCHHHHHHH--HHH-----HHHTTCCBCHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHhcccCcEEEEEeeCccccchhhcccchhhhHHH--Hhh-----cccccCCCCHHHHHHHHHHHHcC
Confidence 99999999888755 589999999999987642110 0000000 000 00112358899999999999998
Q ss_pred CCC
Q 017914 268 PSA 270 (364)
Q Consensus 268 ~~~ 270 (364)
+..
T Consensus 236 ~~~ 238 (266)
T 3p19_A 236 PQN 238 (266)
T ss_dssp CTT
T ss_pred CCC
Confidence 765
|
| >2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.80 E-value=3.4e-18 Score=148.07 Aligned_cols=209 Identities=11% Similarity=0.024 Sum_probs=130.1
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCChhhH--Hhh-------ccCceeeE
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETAL--MIL-------TTLKNYTH 126 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~--~~~-------~~~d~v~~ 126 (364)
..+|+||||| +|+||++++++|+++|++|++++|+.+.. ..++.++.+|++|.+. ..+ ..+|+++|
T Consensus 5 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~----~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~id~lv~ 80 (250)
T 2fwm_X 5 FSGKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQE----QYPFATEVMDVADAAQVAQVCQRLLAETERLDALVN 80 (250)
T ss_dssp CTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCCCSS----CCSSEEEECCTTCHHHHHHHHHHHHHHCSCCCEEEE
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCchhhh----cCCceEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 3468999999 99999999999999999999999986531 1347889999999763 233 26899999
Q ss_pred EEEecCCCCCCC----ChhhhHHH------HHHHHh----hcCCccEEEEEccceeecCCCCccccCCCCCCCCChhHHH
Q 017914 127 LLVSIPPLEGTG----DPMLKHGE------LLRSTL----MNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANPTTELGRL 192 (364)
Q Consensus 127 ~~~~~~~~~~~~----~~~~~~~~------~l~~a~----~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~~s 192 (364)
+++......... +....... ++..++ ++.+.+++|++||...+.. ..+...|+.+
T Consensus 81 ~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~-----------~~~~~~Y~~s 149 (250)
T 2fwm_X 81 AAGILRMGATDQLSKEDWQQTFAVNVGGAFNLFQQTMNQFRRQRGGAIVTVASDAAHTP-----------RIGMSAYGAS 149 (250)
T ss_dssp CCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSC-----------CTTCHHHHHH
T ss_pred CCCcCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhcCCCEEEEECchhhCCC-----------CCCCchHHHH
Confidence 997644321111 11111112 233332 3445679999999765422 2244689999
Q ss_pred HHHHHHHHHHhhhh---cCCcEEEEEecceecCCCChHH---HHHHhcCccc-ccccccCCcccccccHHHHHHHHHHHc
Q 017914 193 RLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRSSVD---TIIKQLPLSE-GQKMRRARQYTSRIHVDDICQVLSASI 265 (364)
Q Consensus 193 K~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~---~~~~~~~~~~-~~~~~~~~~~~~~i~v~Dva~~~~~~l 265 (364)
|...|.+.+.++.+ .|+++++++||.++++...... .... ..+.. ............+.+++|+|++++.++
T Consensus 150 K~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~-~~~~~~~~~~~~~~p~~~~~~p~dvA~~v~~l~ 228 (250)
T 2fwm_X 150 KAALKSLALSVGLELAGSGVRCNVVSPGSTDTDMQRTLWVSDDAEE-QRIRGFGEQFKLGIPLGKIARPQEIANTILFLA 228 (250)
T ss_dssp HHHHHHHHHHHHHHHGGGTCEEEEEEECCC-------------------------------------CHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCccCCEEEEEECCcccCccccccccChhHHH-HHHhhhhhcccccCCCCCCcCHHHHHHHHHHHh
Confidence 99999999988754 4899999999999886522110 0000 00000 000000011123688999999999998
Q ss_pred cCC---CCCceEEEeCCCC
Q 017914 266 DKP---SAWNVYNVVDDDP 281 (364)
Q Consensus 266 ~~~---~~g~~~~i~~~~~ 281 (364)
... -.|+.+++.+|..
T Consensus 229 s~~~~~~tG~~i~vdGG~~ 247 (250)
T 2fwm_X 229 SDLASHITLQDIVVDGGST 247 (250)
T ss_dssp SGGGTTCCSCEEEESTTTT
T ss_pred CccccCCCCCEEEECCCcc
Confidence 764 3489999988754
|
| >3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.80 E-value=1.7e-18 Score=151.24 Aligned_cols=210 Identities=10% Similarity=0.022 Sum_probs=138.7
Q ss_pred CCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhh-hhhh------hCCceEEEccCChhhH--Hhh-------cc
Q 017914 58 SPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKK-KELE------QSGFDVHLFNANETAL--MIL-------TT 120 (364)
Q Consensus 58 ~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~-~~l~------~~~~~~~~~D~~~~~~--~~~-------~~ 120 (364)
++++||||| +|+||++++++|+++|++|++++|+.... ..+. ..++.++.+|++|.+. ..+ ..
T Consensus 6 ~~k~vlVTGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~ 85 (264)
T 3i4f_A 6 FVRHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDVEERLQFVQADVTKKEDLHKIVEEAMSHFGK 85 (264)
T ss_dssp CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTGGGGGGEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred ccCEEEEeCCCchhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence 457899999 99999999999999999999998865432 2111 1467899999999764 222 37
Q ss_pred CceeeEEEEecCC-CCCCC-----ChhhhHHH------HHHHHh----hcCCccEEEEEccceeecCCCCccccCCCCCC
Q 017914 121 LKNYTHLLVSIPP-LEGTG-----DPMLKHGE------LLRSTL----MNGHLQWLGYLSSTGVYGHSGGAWVDEDYPAN 184 (364)
Q Consensus 121 ~d~v~~~~~~~~~-~~~~~-----~~~~~~~~------~l~~a~----~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~ 184 (364)
+|+++|+++.... ..... +....... ++..++ ++.+..++|++||.+.++.. +..
T Consensus 86 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~---------~~~ 156 (264)
T 3i4f_A 86 IDFLINNAGPYVFERKKLVDYEEDEWNEMIQGNLTAVFHLLKLVVPVMRKQNFGRIINYGFQGADSAP---------GWI 156 (264)
T ss_dssp CCEEECCCCCCCCSCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTTGGGCC---------CCT
T ss_pred CCEEEECCcccccCCCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCeEEEEeechhcccC---------CCC
Confidence 8999999983211 11111 11111122 233333 45566799999987543221 122
Q ss_pred CCChhHHHHHHHHHHHHHhhhh---cCCcEEEEEecceecCCCCh-HHHHHHhcCcccccccccCCcccccccHHHHHHH
Q 017914 185 PTTELGRLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRSS-VDTIIKQLPLSEGQKMRRARQYTSRIHVDDICQV 260 (364)
Q Consensus 185 ~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~ 260 (364)
+...|+.+|.+.+.+++.++.+ .|+++++++||.++++.... ........ .. ......+.+++|+|++
T Consensus 157 ~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~--~~------~~p~~r~~~~~dva~~ 228 (264)
T 3i4f_A 157 YRSAFAAAKVGLVSLTKTVAYEEAEYGITANMVCPGDIIGEMKEATIQEARQLK--EH------NTPIGRSGTGEDIART 228 (264)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCGGGGSCCHHHHHHC----------------CCCCHHHHHHH
T ss_pred CCchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEccCCccCccchhccHHHHHHH--hh------cCCCCCCcCHHHHHHH
Confidence 4578999999999999988755 58999999999998875332 22221110 00 1112335789999999
Q ss_pred HHHHccCC---CCCceEEEeCCCCCCH
Q 017914 261 LSASIDKP---SAWNVYNVVDDDPAPR 284 (364)
Q Consensus 261 ~~~~l~~~---~~g~~~~i~~~~~~s~ 284 (364)
++.++... -.|+++++.+|....+
T Consensus 229 v~~l~s~~~~~itG~~i~vdGG~~~~~ 255 (264)
T 3i4f_A 229 ISFLCEDDSDMITGTIIEVTGAVDVIH 255 (264)
T ss_dssp HHHHHSGGGTTCCSCEEEESCSCCCCC
T ss_pred HHHHcCcccCCCCCcEEEEcCceeecc
Confidence 99999764 2489999998865444
|
| >3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus} | Back alignment and structure |
|---|
Probab=99.80 E-value=2.4e-18 Score=152.16 Aligned_cols=209 Identities=10% Similarity=-0.062 Sum_probs=139.8
Q ss_pred CCCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhh-------CCceEEEccCChhhH--Hh-------h
Q 017914 56 WQSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQ-------SGFDVHLFNANETAL--MI-------L 118 (364)
Q Consensus 56 ~~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~-------~~~~~~~~D~~~~~~--~~-------~ 118 (364)
...+++||||| +|+||++++++|+++|++|++++|+.++...+.. ..+.++.+|++|.+. .. +
T Consensus 38 ~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 117 (293)
T 3rih_A 38 DLSARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAGNVIGVRLDVSDPGSCADAARTVVDAF 117 (293)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHTTSSSSCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCcEEEEEEeCCCHHHHHHHHHHHHHHc
Confidence 45678999999 9999999999999999999999998876544321 357889999999763 22 2
Q ss_pred ccCceeeEEEEecCCCCCCC----ChhhhHHH------HHHHHh----hcCCccEEEEEccceeecCCCCccccCCCCCC
Q 017914 119 TTLKNYTHLLVSIPPLEGTG----DPMLKHGE------LLRSTL----MNGHLQWLGYLSSTGVYGHSGGAWVDEDYPAN 184 (364)
Q Consensus 119 ~~~d~v~~~~~~~~~~~~~~----~~~~~~~~------~l~~a~----~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~ 184 (364)
..+|+++|+++......... +....... ++..++ ++.+..++|++||...+. .+..
T Consensus 118 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iV~isS~~~~~----------~~~~ 187 (293)
T 3rih_A 118 GALDVVCANAGIFPEARLDTMTPEQLSEVLDVNVKGTVYTVQACLAPLTASGRGRVILTSSITGPV----------TGYP 187 (293)
T ss_dssp SCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHSSCEEEEECCSBTTT----------BBCT
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEeChhhcc----------CCCC
Confidence 46899999988654322111 11111222 233333 344567999999865320 0111
Q ss_pred CCChhHHHHHHHHHHHHHhhhh---cCCcEEEEEecceecCCCCh-HHHHHHhcCcccccccccCCcccccccHHHHHHH
Q 017914 185 PTTELGRLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRSS-VDTIIKQLPLSEGQKMRRARQYTSRIHVDDICQV 260 (364)
Q Consensus 185 ~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~ 260 (364)
+...|+.+|...+.+.+.++.+ .|+++++|+||.++++.... ...+.... .... ...-+...+|+|++
T Consensus 188 ~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~--~~~~------p~~r~~~p~dvA~~ 259 (293)
T 3rih_A 188 GWSHYGASKAAQLGFMRTAAIELAPRGVTVNAILPGNILTEGLVDMGEEYISGM--ARSI------PMGMLGSPVDIGHL 259 (293)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHTCHHHHHHH--HTTS------TTSSCBCHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCCcCcchhhccHHHHHHH--HhcC------CCCCCCCHHHHHHH
Confidence 3468999999999999988755 58999999999998863211 11111110 0000 11223678999999
Q ss_pred HHHHccCC---CCCceEEEeCCCCC
Q 017914 261 LSASIDKP---SAWNVYNVVDDDPA 282 (364)
Q Consensus 261 ~~~~l~~~---~~g~~~~i~~~~~~ 282 (364)
++.++... -.|+++++.+|..+
T Consensus 260 v~fL~s~~a~~itG~~i~vdGG~~~ 284 (293)
T 3rih_A 260 AAFLATDEAGYITGQAIVVDGGQVL 284 (293)
T ss_dssp HHHHHSGGGTTCCSCEEEESTTTTC
T ss_pred HHHHhCccccCCCCCEEEECCCccC
Confidence 99998754 34899999888654
|
| >1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A* | Back alignment and structure |
|---|
Probab=99.80 E-value=2.8e-18 Score=150.89 Aligned_cols=205 Identities=11% Similarity=-0.034 Sum_probs=135.2
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEe-Cchhhhhhh-------hCCceEEEccCChh----hH--Hhh---
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCT-NVMKKKELE-------QSGFDVHLFNANET----AL--MIL--- 118 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r-~~~~~~~l~-------~~~~~~~~~D~~~~----~~--~~~--- 118 (364)
+.+++||||| +|+||++++++|+++|++|++++| +.+....+. ...+.++.+|++|. +. ..+
T Consensus 9 ~~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 88 (276)
T 1mxh_A 9 SECPAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCS 88 (276)
T ss_dssp --CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHhcCCceEEEeccCCCccccHHHHHHHHHHH
Confidence 3457899999 999999999999999999999999 765544321 24578899999998 53 222
Q ss_pred ----ccCceeeEEEEecCCCCCC--CC------------h-hhhHHHH------HHHHhhc---CCc------cEEEEEc
Q 017914 119 ----TTLKNYTHLLVSIPPLEGT--GD------------P-MLKHGEL------LRSTLMN---GHL------QWLGYLS 164 (364)
Q Consensus 119 ----~~~d~v~~~~~~~~~~~~~--~~------------~-~~~~~~~------l~~a~~~---~~~------~r~v~~S 164 (364)
..+|+++|+++........ .. . ......| +..++.. .+. +++|++|
T Consensus 89 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~g~iv~is 168 (276)
T 1mxh_A 89 FRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLC 168 (276)
T ss_dssp HHHHSCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------CCCEEEEEEC
T ss_pred HHhcCCCCEEEECCCCCCCCCccccCcccccccccchHHHHHHHHHhccHHHHHHHHHHHHHHhcCCCCCCCCcEEEEEC
Confidence 3689999999865432111 11 0 1111222 3333322 334 7999999
Q ss_pred cceeecCCCCccccCCCCCCCCChhHHHHHHHHHHHHHhhhhc---CCcEEEEEecceecCCCChHHHHHHhcCcccccc
Q 017914 165 STGVYGHSGGAWVDEDYPANPTTELGRLRLSAEKGWLNLGRDL---GISAQVFRLGGIYGPGRSSVDTIIKQLPLSEGQK 241 (364)
Q Consensus 165 s~~vy~~~~~~~~~E~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~ 241 (364)
|...+... .+...|+.+|...+.+.+.++.+. |+++++|+||.+.++ ........... .....
T Consensus 169 S~~~~~~~-----------~~~~~Y~asK~a~~~l~~~la~e~~~~gi~v~~v~PG~v~t~-~~~~~~~~~~~--~~~~p 234 (276)
T 1mxh_A 169 DAMTDLPL-----------PGFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLP-PAMPQETQEEY--RRKVP 234 (276)
T ss_dssp CGGGGSCC-----------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCC-SSSCHHHHHHH--HTTCT
T ss_pred chhhcCCC-----------CCCeehHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCC-ccCCHHHHHHH--HhcCC
Confidence 97765321 234689999999999998887553 899999999999988 32211111110 00001
Q ss_pred cccCCcccccccHHHHHHHHHHHccCCC---CCceEEEeCCC
Q 017914 242 MRRARQYTSRIHVDDICQVLSASIDKPS---AWNVYNVVDDD 280 (364)
Q Consensus 242 ~~~~~~~~~~i~v~Dva~~~~~~l~~~~---~g~~~~i~~~~ 280 (364)
. .+++.+++|+|++++.++.... .|+.|++.+|.
T Consensus 235 ~-----~r~~~~~~dva~~v~~l~s~~~~~~tG~~~~vdgG~ 271 (276)
T 1mxh_A 235 L-----GQSEASAAQIADAIAFLVSKDAGYITGTTLKVDGGL 271 (276)
T ss_dssp T-----TSCCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred C-----CCCCCCHHHHHHHHHHHhCccccCccCcEEEECCch
Confidence 0 1226889999999999987542 48899998774
|
| >3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus} | Back alignment and structure |
|---|
Probab=99.80 E-value=2.7e-18 Score=149.72 Aligned_cols=214 Identities=11% Similarity=-0.070 Sum_probs=134.4
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhh---CCceEEEccCChhhH--Hhh-------ccCce
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQ---SGFDVHLFNANETAL--MIL-------TTLKN 123 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~---~~~~~~~~D~~~~~~--~~~-------~~~d~ 123 (364)
..+++||||| +|+||++++++|+++|++|++++|+.++...+.. ..+.++.+|++|.+. ..+ ..+|.
T Consensus 7 l~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~ 86 (261)
T 3n74_A 7 LEGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEIGDAALAVAADISKEADVDAAVEAALSKFGKVDI 86 (261)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHhcCCCCE
Confidence 4568999999 9999999999999999999999999877655432 467899999999763 222 36899
Q ss_pred eeEEEEecCCCCCCCC-----hhhhHHHHHH------HHh----hcC----CccEEEEEccceeecCCCCccccCCCCCC
Q 017914 124 YTHLLVSIPPLEGTGD-----PMLKHGELLR------STL----MNG----HLQWLGYLSSTGVYGHSGGAWVDEDYPAN 184 (364)
Q Consensus 124 v~~~~~~~~~~~~~~~-----~~~~~~~~l~------~a~----~~~----~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~ 184 (364)
++|+++.........+ .......|+. .++ ++. +..++|++||...+.. ..
T Consensus 87 li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~-----------~~ 155 (261)
T 3n74_A 87 LVNNAGIGHKPQNAELVEPEEFDRIVGVNVRGVYLMTSKLIPHFKENGAKGQECVILNVASTGAGRP-----------RP 155 (261)
T ss_dssp EEECCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTTTTSC-----------CT
T ss_pred EEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCCCeEEEEeCchhhcCC-----------CC
Confidence 9999986542221111 1111122222 222 221 1457999998764422 12
Q ss_pred CCChhHHHHHHHHHHHHHhhhh---cCCcEEEEEecceecCCCChHHHHHHhcCcccccccccCCcccccccHHHHHHHH
Q 017914 185 PTTELGRLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRSSVDTIIKQLPLSEGQKMRRARQYTSRIHVDDICQVL 261 (364)
Q Consensus 185 ~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~ 261 (364)
....|+.+|.+.+.+.+.++.+ .+++++.++||.+.++....+ .....-.....+........+++++|+|+++
T Consensus 156 ~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~ 232 (261)
T 3n74_A 156 NLAWYNATKGWVVSVTKALAIELAPAKIRVVALNPVAGETPLLTTF---MGEDSEEIRKKFRDSIPMGRLLKPDDLAEAA 232 (261)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC----------------------------CTTSSCCCHHHHHHHH
T ss_pred CccHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccChhhhhh---cccCcHHHHHHHhhcCCcCCCcCHHHHHHHH
Confidence 3457999999999999988765 589999999999887642211 0000000000111112234568999999999
Q ss_pred HHHccCC---CCCceEEEeCCCCCCH
Q 017914 262 SASIDKP---SAWNVYNVVDDDPAPR 284 (364)
Q Consensus 262 ~~~l~~~---~~g~~~~i~~~~~~s~ 284 (364)
+.++... -.|+++++.+|..++-
T Consensus 233 ~~l~s~~~~~itG~~i~vdgG~~~~~ 258 (261)
T 3n74_A 233 AFLCSPQASMITGVALDVDGGRSIGG 258 (261)
T ss_dssp HHHTSGGGTTCCSCEEEESTTTTC--
T ss_pred HHHcCCcccCcCCcEEEecCCcccCC
Confidence 9999654 3489999999876654
|
| >2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.80 E-value=1.2e-19 Score=158.75 Aligned_cols=216 Identities=10% Similarity=-0.055 Sum_probs=140.7
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhh----hh----hCCceEEEccCChhhH--Hhh-------
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKE----LE----QSGFDVHLFNANETAL--MIL------- 118 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~----l~----~~~~~~~~~D~~~~~~--~~~------- 118 (364)
..+++||||| +|+||++++++|+++|++|++++|+.++... +. ..++.++.+|++|.+. ..+
T Consensus 5 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 84 (267)
T 2gdz_A 5 VNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHF 84 (267)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred cCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhcCCCceEEEecCCCCHHHHHHHHHHHHHHc
Confidence 3457999999 9999999999999999999999998765432 21 1357889999999763 222
Q ss_pred ccCceeeEEEEecCCCCCCCChhhhHH----------HHHHHHhhcCC---ccEEEEEccceeecCCCCccccCCCCCCC
Q 017914 119 TTLKNYTHLLVSIPPLEGTGDPMLKHG----------ELLRSTLMNGH---LQWLGYLSSTGVYGHSGGAWVDEDYPANP 185 (364)
Q Consensus 119 ~~~d~v~~~~~~~~~~~~~~~~~~~~~----------~~l~~a~~~~~---~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~ 185 (364)
..+|+++|+++.... .+...... .+++..+++.+ .+++|++||...+... .+
T Consensus 85 g~id~lv~~Ag~~~~----~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~ 149 (267)
T 2gdz_A 85 GRLDILVNNAGVNNE----KNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPV-----------AQ 149 (267)
T ss_dssp SCCCEEEECCCCCCS----SSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCC-----------TT
T ss_pred CCCCEEEECCCCCCh----hhHHHHHhHHHHHHHHHHHHHHHHHHhccCCCCCEEEEeCCccccCCC-----------CC
Confidence 357999999875321 22222222 23344443332 5799999998765322 13
Q ss_pred CChhHHHHHHHHHHHHHhh-----hhcCCcEEEEEecceecCCCChHHHHHHhcCcc-cccccccCCcccccccHHHHHH
Q 017914 186 TTELGRLRLSAEKGWLNLG-----RDLGISAQVFRLGGIYGPGRSSVDTIIKQLPLS-EGQKMRRARQYTSRIHVDDICQ 259 (364)
Q Consensus 186 ~~~Y~~sK~~~E~~~~~~~-----~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~v~Dva~ 259 (364)
...|+.+|...|.+.+.++ ...|+++++|+||.+.++....+..-....... .............+++++|+|+
T Consensus 150 ~~~Y~~sK~a~~~~~~~~ala~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~ 229 (267)
T 2gdz_A 150 QPVYCASKHGIVGFTRSAALAANLMNSGVRLNAICPGFVNTAILESIEKEENMGQYIEYKDHIKDMIKYYGILDPPLIAN 229 (267)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESCBSSHHHHGGGCHHHHGGGGGGHHHHHHHHHHHCCBCHHHHHH
T ss_pred CchHHHHHHHHHHHHHHHHHHHHhccCCcEEEEEecCcCcchhhhccccccccchhhhHHHHHHHHhccccCCCHHHHHH
Confidence 3579999999999988642 245899999999998764211000000000000 0000000011234689999999
Q ss_pred HHHHHccCC-CCCceEEEeCCCCCCHHHH
Q 017914 260 VLSASIDKP-SAWNVYNVVDDDPAPREEV 287 (364)
Q Consensus 260 ~~~~~l~~~-~~g~~~~i~~~~~~s~~el 287 (364)
+++.++... -.|++|++.+++.+++.|+
T Consensus 230 ~v~~l~s~~~~~G~~~~v~gg~~~~~~~~ 258 (267)
T 2gdz_A 230 GLITLIEDDALNGAIMKITTSKGIHFQDY 258 (267)
T ss_dssp HHHHHHHCTTCSSCEEEEETTTEEEECCC
T ss_pred HHHHHhcCcCCCCcEEEecCCCcccccCc
Confidence 999999865 4589999999887776653
|
| >1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.80 E-value=4.5e-18 Score=149.23 Aligned_cols=205 Identities=10% Similarity=-0.019 Sum_probs=135.1
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhh------hCCceEEEccCChhhH--Hhh--------c
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELE------QSGFDVHLFNANETAL--MIL--------T 119 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~------~~~~~~~~~D~~~~~~--~~~--------~ 119 (364)
..+++||||| +|+||++++++|+++|++|++++|+.++...+. ..++.++.+|++|.+. ..+ .
T Consensus 19 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g 98 (273)
T 1ae1_A 19 LKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVFDG 98 (273)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTTS
T ss_pred CCCCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 4568999999 999999999999999999999999876544321 1357889999999763 222 4
Q ss_pred cCceeeEEEEecCCCCCCCChhh----hHHH------HHHHHh----hcCCccEEEEEccceeecCCCCccccCCCCCCC
Q 017914 120 TLKNYTHLLVSIPPLEGTGDPML----KHGE------LLRSTL----MNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANP 185 (364)
Q Consensus 120 ~~d~v~~~~~~~~~~~~~~~~~~----~~~~------~l~~a~----~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~ 185 (364)
.+|+++|+++............. .... ++..++ ++.+.+++|++||...+... .+
T Consensus 99 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~-----------~~ 167 (273)
T 1ae1_A 99 KLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSAL-----------PS 167 (273)
T ss_dssp CCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGGTSCC-----------TT
T ss_pred CCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHhhcCCC-----------CC
Confidence 68999999876433211111111 1112 233322 34456799999998765322 13
Q ss_pred CChhHHHHHHHHHHHHHhhhh---cCCcEEEEEecceecCCCChH-H------HHHHhcCcccccccccCCcccccccHH
Q 017914 186 TTELGRLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRSSV-D------TIIKQLPLSEGQKMRRARQYTSRIHVD 255 (364)
Q Consensus 186 ~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~-~------~~~~~~~~~~~~~~~~~~~~~~~i~v~ 255 (364)
...|+.+|...+.+.+.++.+ .|+++++|+||.++++..... . ..... +... .....+.+++
T Consensus 168 ~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~--~~~~------~p~~r~~~p~ 239 (273)
T 1ae1_A 168 VSLYSASKGAINQMTKSLACEWAKDNIRVNSVAPGVILTPLVETAIKKNPHQKEEIDN--FIVK------TPMGRAGKPQ 239 (273)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC-------------CHHHHHH--HHHH------STTCSCBCHH
T ss_pred cchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCchhhhhhhcccCcHHHHHH--HHhc------CCCCCCcCHH
Confidence 468999999999999888754 389999999999988752211 0 00000 0000 0112357899
Q ss_pred HHHHHHHHHccCC---CCCceEEEeCCC
Q 017914 256 DICQVLSASIDKP---SAWNVYNVVDDD 280 (364)
Q Consensus 256 Dva~~~~~~l~~~---~~g~~~~i~~~~ 280 (364)
|+|++++.++... -.|+++++.+|.
T Consensus 240 dvA~~v~~l~s~~~~~~tG~~i~vdGG~ 267 (273)
T 1ae1_A 240 EVSALIAFLCFPAASYITGQIIWADGGF 267 (273)
T ss_dssp HHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred HHHHHHHHHhCccccCcCCCEEEECCCc
Confidence 9999999988753 248999998874
|
| >3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=99.80 E-value=6.4e-19 Score=152.96 Aligned_cols=206 Identities=11% Similarity=0.055 Sum_probs=118.3
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhh------CCceEEEccCChhhH--Hhh-------cc
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQ------SGFDVHLFNANETAL--MIL-------TT 120 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~------~~~~~~~~D~~~~~~--~~~-------~~ 120 (364)
..+++||||| +|+||++++++|+++|++|++++|+.+....+.. ..+.++.+|++|.+. ..+ ..
T Consensus 7 ~~~k~vlITGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 86 (253)
T 3qiv_A 7 FENKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGGTAISVAVDVSDPESAKAMADRTLAEFGG 86 (253)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred cCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 4568999999 9999999999999999999999998776554321 357789999999764 222 37
Q ss_pred CceeeEEEEecCCCC-----CC--CChhhhHHHHHHH----------HhhcCCccEEEEEccceeecCCCCccccCCCCC
Q 017914 121 LKNYTHLLVSIPPLE-----GT--GDPMLKHGELLRS----------TLMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPA 183 (364)
Q Consensus 121 ~d~v~~~~~~~~~~~-----~~--~~~~~~~~~~l~~----------a~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~ 183 (364)
+|.++|+++...... .. .+.......|+.. .+.+.+..++|++||...|.
T Consensus 87 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~------------- 153 (253)
T 3qiv_A 87 IDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDGALWCTRAVYKKMTKRGGGAIVNQSSTAAWL------------- 153 (253)
T ss_dssp CCEEEECCCCCCGGGGGCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECC------------------
T ss_pred CCEEEECCCcCCCCCCcccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEECCccccC-------------
Confidence 899999987632111 11 1111222233322 23344567999999987651
Q ss_pred CCCChhHHHHHHHHHHHHHhhhhc---CCcEEEEEecceecCCCChHHHHHHhcCcccccccccCCcccccccHHHHHHH
Q 017914 184 NPTTELGRLRLSAEKGWLNLGRDL---GISAQVFRLGGIYGPGRSSVDTIIKQLPLSEGQKMRRARQYTSRIHVDDICQV 260 (364)
Q Consensus 184 ~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~ 260 (364)
+...|+.+|.+.|.+++.++.+. |+++++++||.+.++....... . .. ............+.+++|+|++
T Consensus 154 -~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~---~-~~--~~~~~~~~~~~~~~~~~dva~~ 226 (253)
T 3qiv_A 154 -YSNYYGLAKVGINGLTQQLSRELGGRNIRINAIAPGPIDTEANRTTTP---K-EM--VDDIVKGLPLSRMGTPDDLVGM 226 (253)
T ss_dssp -------CCHHHHHHHHHHHHHHTTTTTEEEEEEEC-------------------------------------CCHHHHH
T ss_pred -CCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEecCCcccchhhcCc---H-HH--HHHHhccCCCCCCCCHHHHHHH
Confidence 23569999999999999887664 7999999999998875321100 0 00 0000111122334678999999
Q ss_pred HHHHccCCC---CCceEEEeCCCCC
Q 017914 261 LSASIDKPS---AWNVYNVVDDDPA 282 (364)
Q Consensus 261 ~~~~l~~~~---~g~~~~i~~~~~~ 282 (364)
++.++.... .|++|++.+|..+
T Consensus 227 ~~~l~s~~~~~~tG~~~~vdgG~~~ 251 (253)
T 3qiv_A 227 CLFLLSDEASWITGQIFNVDGGQII 251 (253)
T ss_dssp HHHHHSGGGTTCCSCEEEC------
T ss_pred HHHHcCccccCCCCCEEEECCCeec
Confidence 999987543 4899999988654
|
| >4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A* | Back alignment and structure |
|---|
Probab=99.80 E-value=4.1e-18 Score=149.03 Aligned_cols=205 Identities=10% Similarity=-0.059 Sum_probs=138.3
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeC-chhhhhhh------hCCceEEEccCChhhH--Hhh-------c
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTN-VMKKKELE------QSGFDVHLFNANETAL--MIL-------T 119 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~-~~~~~~l~------~~~~~~~~~D~~~~~~--~~~-------~ 119 (364)
..+++||||| +|+||++++++|+++|++|++++|+ .+....+. ...+.++.+|++|.+. ..+ .
T Consensus 26 l~~k~vlVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~~~g 105 (269)
T 4dmm_A 26 LTDRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAGGEAFAVKADVSQESEVEALFAAVIERWG 105 (269)
T ss_dssp TTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 4568999999 9999999999999999999999984 33333221 1367889999999764 222 3
Q ss_pred cCceeeEEEEecCCCCCCC----ChhhhHHHH------HHHH----hhcCCccEEEEEccceeecCCCCccccCCCCCCC
Q 017914 120 TLKNYTHLLVSIPPLEGTG----DPMLKHGEL------LRST----LMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANP 185 (364)
Q Consensus 120 ~~d~v~~~~~~~~~~~~~~----~~~~~~~~~------l~~a----~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~ 185 (364)
.+|+++|+++......... +.......| +..+ +.+.+..++|++||...+... ..
T Consensus 106 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~ 174 (269)
T 4dmm_A 106 RLDVLVNNAGITRDTLLLRMKRDDWQSVLDLNLGGVFLCSRAAAKIMLKQRSGRIINIASVVGEMGN-----------PG 174 (269)
T ss_dssp CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCHHHHHCC-----------TT
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhcCCC-----------CC
Confidence 6899999998654322111 111112222 2222 233456799999997654322 13
Q ss_pred CChhHHHHHHHHHHHHHhhhh---cCCcEEEEEecceecCCCChHHHHHHhcCcccccccccCCcccccccHHHHHHHHH
Q 017914 186 TTELGRLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRSSVDTIIKQLPLSEGQKMRRARQYTSRIHVDDICQVLS 262 (364)
Q Consensus 186 ~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~ 262 (364)
...|+.+|.+.+.+.+.++.+ .|+++++++||.+.++.......-..... .....+.+++|+|++++
T Consensus 175 ~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~----------~p~~r~~~~~dvA~~v~ 244 (269)
T 4dmm_A 175 QANYSAAKAGVIGLTKTVAKELASRGITVNAVAPGFIATDMTSELAAEKLLEV----------IPLGRYGEAAEVAGVVR 244 (269)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBTTSCSCHHHHHHHGGG----------CTTSSCBCHHHHHHHHH
T ss_pred chhHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEECCCcCcccccccHHHHHhc----------CCCCCCCCHHHHHHHHH
Confidence 468999999999998888754 58999999999998876443221000000 11233578999999999
Q ss_pred HHccCC----CCCceEEEeCCCCC
Q 017914 263 ASIDKP----SAWNVYNVVDDDPA 282 (364)
Q Consensus 263 ~~l~~~----~~g~~~~i~~~~~~ 282 (364)
.++..+ -.|+++++.+|..+
T Consensus 245 ~l~s~~~~~~itG~~i~vdGG~~~ 268 (269)
T 4dmm_A 245 FLAADPAAAYITGQVINIDGGLVM 268 (269)
T ss_dssp HHHHCGGGGGCCSCEEEESTTSCC
T ss_pred HHhCCcccCCCcCCEEEECCCeec
Confidence 999873 23899999888654
|
| >2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A* | Back alignment and structure |
|---|
Probab=99.79 E-value=2.8e-18 Score=149.93 Aligned_cols=209 Identities=11% Similarity=-0.037 Sum_probs=138.0
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhh---CCceEEEccCChhhH--Hhhc-------cCce
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQ---SGFDVHLFNANETAL--MILT-------TLKN 123 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~---~~~~~~~~D~~~~~~--~~~~-------~~d~ 123 (364)
..+++||||| +|+||++++++|+++|++|++++|+.++...+.+ .++.++.+|++|.+. ..++ .+|+
T Consensus 10 ~~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~ 89 (265)
T 2o23_A 10 VKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNNCVFAPADVTSEKDVQTALALAKGKFGRVDV 89 (265)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcHhHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHCCCCCE
Confidence 4568999999 9999999999999999999999998765544322 467899999999763 3332 7899
Q ss_pred eeEEEEecCCCCCC----------CChhhhHHH------HHHHHhh----cC------CccEEEEEccceeecCCCCccc
Q 017914 124 YTHLLVSIPPLEGT----------GDPMLKHGE------LLRSTLM----NG------HLQWLGYLSSTGVYGHSGGAWV 177 (364)
Q Consensus 124 v~~~~~~~~~~~~~----------~~~~~~~~~------~l~~a~~----~~------~~~r~v~~Ss~~vy~~~~~~~~ 177 (364)
++|+++........ .+....... ++..++. +. +..++|++||...+...
T Consensus 90 li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~----- 164 (265)
T 2o23_A 90 AVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQ----- 164 (265)
T ss_dssp EEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCC-----
T ss_pred EEECCccCCCCccccccccCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccccCCCCcEEEEeCChhhcCCC-----
Confidence 99999865432111 011111112 2333322 22 56799999998765432
Q ss_pred cCCCCCCCCChhHHHHHHHHHHHHHhhhh---cCCcEEEEEecceecCCCChHHHHHHhcCcccccccccCCcccccccH
Q 017914 178 DEDYPANPTTELGRLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRSSVDTIIKQLPLSEGQKMRRARQYTSRIHV 254 (364)
Q Consensus 178 ~E~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v 254 (364)
.+...|+.+|...+.+.+.++.+ .++++++++||.+.++.......-.. ..+...... ...++++
T Consensus 165 ------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~-~~~~~~~~~-----~~~~~~~ 232 (265)
T 2o23_A 165 ------VGQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLTSLPEKVC-NFLASQVPF-----PSRLGDP 232 (265)
T ss_dssp ------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC-----------CHHHHTCSS-----SCSCBCH
T ss_pred ------CCCchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccccCccccccCHHHH-HHHHHcCCC-----cCCCCCH
Confidence 13468999999999998887654 48999999999998764221110000 000000000 0235789
Q ss_pred HHHHHHHHHHccCC-CCCceEEEeCCCCC
Q 017914 255 DDICQVLSASIDKP-SAWNVYNVVDDDPA 282 (364)
Q Consensus 255 ~Dva~~~~~~l~~~-~~g~~~~i~~~~~~ 282 (364)
+|+|++++.+++.. -.|+.+++.+|..+
T Consensus 233 ~dva~~~~~l~~~~~~~G~~i~vdgG~~~ 261 (265)
T 2o23_A 233 AEYAHLVQAIIENPFLNGEVIRLDGAIRM 261 (265)
T ss_dssp HHHHHHHHHHHHCTTCCSCEEEESTTCCC
T ss_pred HHHHHHHHHHhhcCccCceEEEECCCEec
Confidence 99999999998765 34889999887544
|
| >3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei} | Back alignment and structure |
|---|
Probab=99.79 E-value=2e-18 Score=151.08 Aligned_cols=207 Identities=12% Similarity=0.024 Sum_probs=138.4
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhh------hCCceEEEccCChhhH--Hhh-------cc
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELE------QSGFDVHLFNANETAL--MIL-------TT 120 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~------~~~~~~~~~D~~~~~~--~~~-------~~ 120 (364)
..+++||||| +|+||++++++|+++|++|++++|+.+..+.+. ...+..+.+|++|.+. ..+ ..
T Consensus 26 l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 105 (270)
T 3ftp_A 26 LDKQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAGLEGRGAVLNVNDATAVDALVESTLKEFGA 105 (270)
T ss_dssp TTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEEeCCCHHHHHHHHHHHHHHcCC
Confidence 4568999999 999999999999999999999999876654432 1367889999999763 222 36
Q ss_pred CceeeEEEEecCCCCCCC----ChhhhHHHH------HHHHh----hcCCccEEEEEccceeecCCCCccccCCCCCCCC
Q 017914 121 LKNYTHLLVSIPPLEGTG----DPMLKHGEL------LRSTL----MNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANPT 186 (364)
Q Consensus 121 ~d~v~~~~~~~~~~~~~~----~~~~~~~~~------l~~a~----~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~ 186 (364)
+|+++|+++......... +.......| +..++ .+.+..++|++||...+.... +.
T Consensus 106 iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~-----------~~ 174 (270)
T 3ftp_A 106 LNVLVNNAGITQDQLAMRMKDDEWDAVIDTNLKAVFRLSRAVLRPMMKARGGRIVNITSVVGSAGNP-----------GQ 174 (270)
T ss_dssp CCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCT-----------TB
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhCCCCC-----------Cc
Confidence 899999998654322111 111112222 22222 234456899999976543221 33
Q ss_pred ChhHHHHHHHHHHHHHhhhh---cCCcEEEEEecceecCCCChH-HHHHHhcCcccccccccCCcccccccHHHHHHHHH
Q 017914 187 TELGRLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRSSV-DTIIKQLPLSEGQKMRRARQYTSRIHVDDICQVLS 262 (364)
Q Consensus 187 ~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~ 262 (364)
..|+.+|.+.+.+.+.++.+ .|+++++++||.+..+....+ ...... .........+.+++|+|++++
T Consensus 175 ~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~--------~~~~~p~~r~~~pedvA~~v~ 246 (270)
T 3ftp_A 175 VNYAAAKAGVAGMTRALAREIGSRGITVNCVAPGFIDTDMTKGLPQEQQTA--------LKTQIPLGRLGSPEDIAHAVA 246 (270)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHHHHHSCHHHHHH--------HHTTCTTCSCBCHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCcchhhcCHHHHHH--------HHhcCCCCCCCCHHHHHHHHH
Confidence 68999999999999888755 489999999999876421100 000000 001111234578999999999
Q ss_pred HHccCC---CCCceEEEeCCCCC
Q 017914 263 ASIDKP---SAWNVYNVVDDDPA 282 (364)
Q Consensus 263 ~~l~~~---~~g~~~~i~~~~~~ 282 (364)
.++... -.|+++++.+|..+
T Consensus 247 ~L~s~~~~~itG~~i~vdGG~~~ 269 (270)
T 3ftp_A 247 FLASPQAGYITGTTLHVNGGMFM 269 (270)
T ss_dssp HHHSGGGTTCCSCEEEESTTSSC
T ss_pred HHhCCCcCCccCcEEEECCCccc
Confidence 988644 24899999888654
|
| >1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G | Back alignment and structure |
|---|
Probab=99.79 E-value=7.7e-19 Score=151.56 Aligned_cols=203 Identities=9% Similarity=-0.044 Sum_probs=133.7
Q ss_pred CCeEEEEc-CChhhHHHHHHHHhCCCEEEEE-EeCchhhhhhh------hCCceEEEccCChhhH--Hhhc-------cC
Q 017914 59 PNRMLILG-MGFVGRIFAEKIKNQGWVVSGT-CTNVMKKKELE------QSGFDVHLFNANETAL--MILT-------TL 121 (364)
Q Consensus 59 ~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~-~r~~~~~~~l~------~~~~~~~~~D~~~~~~--~~~~-------~~ 121 (364)
+|+||||| +|+||++++++|+++|++|+++ .|+.+....+. ..++.++.+|++|.+. ..++ .+
T Consensus 1 ~k~vlVTGasggiG~~la~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i 80 (244)
T 1edo_A 1 SPVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGTI 80 (244)
T ss_dssp CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSCC
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCCC
Confidence 36899999 9999999999999999999995 77765543321 1357788999999763 3332 68
Q ss_pred ceeeEEEEecCCCCCC----CChhhhHHH------HHHHHh----hcCCccEEEEEccceeecCCCCccccCCCCCCCCC
Q 017914 122 KNYTHLLVSIPPLEGT----GDPMLKHGE------LLRSTL----MNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANPTT 187 (364)
Q Consensus 122 d~v~~~~~~~~~~~~~----~~~~~~~~~------~l~~a~----~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~ 187 (364)
|.++|+++........ .+....... ++..++ .+.+.+++|++||...+... .+..
T Consensus 81 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~-----------~~~~ 149 (244)
T 1edo_A 81 DVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGN-----------IGQA 149 (244)
T ss_dssp SEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCC-----------TTCH
T ss_pred CEEEECCCCCCCcCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCEEEEECChhhcCCC-----------CCCc
Confidence 9999999765432110 111111122 223332 23457899999997544221 1346
Q ss_pred hhHHHHHHHHHHHHHhhhh---cCCcEEEEEecceecCCCCh-HHHHHHhcCcccccccccCCcccccccHHHHHHHHHH
Q 017914 188 ELGRLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRSS-VDTIIKQLPLSEGQKMRRARQYTSRIHVDDICQVLSA 263 (364)
Q Consensus 188 ~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~ 263 (364)
.|+.+|...|.+.+.++.+ .+++++++|||.++++.... ...+... +.. ......+++++|+|++++.
T Consensus 150 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~--~~~------~~~~~~~~~~~dva~~~~~ 221 (244)
T 1edo_A 150 NYAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDMTAKLGEDMEKK--ILG------TIPLGRTGQPENVAGLVEF 221 (244)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCHHHHHH--HHT------SCTTCSCBCHHHHHHHHHH
T ss_pred cchhhHHHHHHHHHHHHHHhhhcCCEEEEEeeCccccchhhhcChHHHHH--Hhh------cCCCCCCCCHHHHHHHHHH
Confidence 8999999999999888754 48999999999998753111 1111111 000 0011346899999999999
Q ss_pred HccCC----CCCceEEEeCCC
Q 017914 264 SIDKP----SAWNVYNVVDDD 280 (364)
Q Consensus 264 ~l~~~----~~g~~~~i~~~~ 280 (364)
++..+ -.|+.|++.+|.
T Consensus 222 l~~~~~~~~~~G~~~~v~gG~ 242 (244)
T 1edo_A 222 LALSPAASYITGQAFTIDGGI 242 (244)
T ss_dssp HHHCSGGGGCCSCEEEESTTT
T ss_pred HhCCCccCCcCCCEEEeCCCc
Confidence 98443 248899998874
|
| >2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A* | Back alignment and structure |
|---|
Probab=99.79 E-value=3.6e-18 Score=150.14 Aligned_cols=213 Identities=11% Similarity=0.028 Sum_probs=137.2
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhh----h--hCCceEEEccCChhhH--Hhh-------cc
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKEL----E--QSGFDVHLFNANETAL--MIL-------TT 120 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l----~--~~~~~~~~~D~~~~~~--~~~-------~~ 120 (364)
..+++||||| +|+||++++++|+++|++|++++|+.++...+ . ..++.++.+|++|.+. ..+ ..
T Consensus 20 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 99 (277)
T 2rhc_B 20 QDSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYGP 99 (277)
T ss_dssp TTSCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCS
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHhCC
Confidence 4568999999 99999999999999999999999987654432 1 1357889999999763 222 36
Q ss_pred CceeeEEEEecCCCCCCCCh----hhhHHH------HHHHHhh------cCCccEEEEEccceeecCCCCccccCCCCCC
Q 017914 121 LKNYTHLLVSIPPLEGTGDP----MLKHGE------LLRSTLM------NGHLQWLGYLSSTGVYGHSGGAWVDEDYPAN 184 (364)
Q Consensus 121 ~d~v~~~~~~~~~~~~~~~~----~~~~~~------~l~~a~~------~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~ 184 (364)
+|+++|+++........... ...... ++..++. +.+.+++|++||...+.. ..
T Consensus 100 iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~m~~~~~g~iv~isS~~~~~~-----------~~ 168 (277)
T 2rhc_B 100 VDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQG-----------VV 168 (277)
T ss_dssp CSEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTCHHHHTEEEEEEECCGGGTSC-----------CT
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhChhhHhhcCCeEEEEECccccccC-----------CC
Confidence 89999999764322111111 111112 2333322 235679999999754321 12
Q ss_pred CCChhHHHHHHHHHHHHHhhhh---cCCcEEEEEecceecCCCChH-HHHHHhcCc--cc-ccccccCCcccccccHHHH
Q 017914 185 PTTELGRLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRSSV-DTIIKQLPL--SE-GQKMRRARQYTSRIHVDDI 257 (364)
Q Consensus 185 ~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~-~~~~~~~~~--~~-~~~~~~~~~~~~~i~v~Dv 257 (364)
+...|+.+|...+.+.+.++.+ .|+++++|+||.+.++..... ..+...... .. ............+++++|+
T Consensus 169 ~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dv 248 (277)
T 2rhc_B 169 HAAPYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPSEV 248 (277)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEEECSBCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHSTTSSCBCHHHH
T ss_pred CCccHHHHHHHHHHHHHHHHHHHHHhCcEEEEEecCcCcCchhhhhhhhcccccccchHHHHHHHHhcCCCCCCcCHHHH
Confidence 3468999999999999888754 479999999999987532111 000000000 00 0000001112346899999
Q ss_pred HHHHHHHccCC---CCCceEEEeCCC
Q 017914 258 CQVLSASIDKP---SAWNVYNVVDDD 280 (364)
Q Consensus 258 a~~~~~~l~~~---~~g~~~~i~~~~ 280 (364)
|++++.++..+ -.|++|++.+|.
T Consensus 249 A~~v~~l~s~~~~~~tG~~~~vdGG~ 274 (277)
T 2rhc_B 249 AEMVAYLIGPGAAAVTAQALNVCGGL 274 (277)
T ss_dssp HHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred HHHHHHHhCchhcCCCCcEEEECCCc
Confidence 99999998764 348999998874
|
| >1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.79 E-value=4.6e-18 Score=147.75 Aligned_cols=212 Identities=10% Similarity=-0.010 Sum_probs=135.0
Q ss_pred CCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhh------hCCceEEEccCChhhH--Hhh-------ccCc
Q 017914 59 PNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELE------QSGFDVHLFNANETAL--MIL-------TTLK 122 (364)
Q Consensus 59 ~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~------~~~~~~~~~D~~~~~~--~~~-------~~~d 122 (364)
+++||||| +|+||++++++|+++|++|++++|+.++...+. ..++.++.+|++|.+. ..+ ..+|
T Consensus 2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id 81 (256)
T 1geg_A 2 KKVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGFD 81 (256)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCCC
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCCC
Confidence 57899999 999999999999999999999999876544332 1357889999999763 333 2789
Q ss_pred eeeEEEEecCCCCCCC----ChhhhHHHH----------HHHHhhcCC-ccEEEEEccceeecCCCCccccCCCCCCCCC
Q 017914 123 NYTHLLVSIPPLEGTG----DPMLKHGEL----------LRSTLMNGH-LQWLGYLSSTGVYGHSGGAWVDEDYPANPTT 187 (364)
Q Consensus 123 ~v~~~~~~~~~~~~~~----~~~~~~~~~----------l~~a~~~~~-~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~ 187 (364)
+++|+++......... +.......| ++..+++.+ .+++|++||...+... ....
T Consensus 82 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~~~ 150 (256)
T 1geg_A 82 VIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVGN-----------PELA 150 (256)
T ss_dssp EEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCC-----------TTBH
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCEEEEECchhhcCCC-----------CCch
Confidence 9999987543211100 011111222 222223334 5799999987543211 1235
Q ss_pred hhHHHHHHHHHHHHHhhhh---cCCcEEEEEecceecCCCChH-HHHHHh--cCccc-ccccccCCcccccccHHHHHHH
Q 017914 188 ELGRLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRSSV-DTIIKQ--LPLSE-GQKMRRARQYTSRIHVDDICQV 260 (364)
Q Consensus 188 ~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~-~~~~~~--~~~~~-~~~~~~~~~~~~~i~v~Dva~~ 260 (364)
.|+.+|...+.+.+.++.+ .|+++++|+||.+.++..... ..+... ..... ...+........+.+++|+|++
T Consensus 151 ~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~ 230 (256)
T 1geg_A 151 VYSSSKFAVRGLTQTAARDLAPLGITVNGYCPGIVKTPMWAEIDRQVSEAAGKPLGYGTAEFAKRITLGRLSEPEDVAAC 230 (256)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHHHHHHHHHHHTCCTTHHHHHHHTTCTTCSCBCHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHcCeEEEEEEECCCccchhhhhhhhccccccCChHHHHHHHHhcCCCCCCcCHHHHHHH
Confidence 8999999999999888654 489999999999976531111 000000 00000 0000000112246899999999
Q ss_pred HHHHccCC---CCCceEEEeCCCC
Q 017914 261 LSASIDKP---SAWNVYNVVDDDP 281 (364)
Q Consensus 261 ~~~~l~~~---~~g~~~~i~~~~~ 281 (364)
++.++... -.|+.+++.+|..
T Consensus 231 v~~l~s~~~~~~tG~~i~vdGG~~ 254 (256)
T 1geg_A 231 VSYLASPDSDYMTGQSLLIDGGMV 254 (256)
T ss_dssp HHHHHSGGGTTCCSCEEEESSSSS
T ss_pred HHHHhCccccCCCCCEEEeCCCcc
Confidence 99998764 3489999988753
|
| >2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.79 E-value=5.2e-18 Score=148.94 Aligned_cols=207 Identities=9% Similarity=-0.047 Sum_probs=136.1
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhh-----CCceEEEccCChhhH--Hhh-------ccC
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQ-----SGFDVHLFNANETAL--MIL-------TTL 121 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~-----~~~~~~~~D~~~~~~--~~~-------~~~ 121 (364)
..+++||||| +|+||++++++|+++|++|++++|+.++...+.+ .++.++.+|++|.+. ..+ ..+
T Consensus 27 l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 106 (276)
T 2b4q_A 27 LAGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAYGDCQAIPADLSSEAGARRLAQALGELSARL 106 (276)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHTTSSCEEECCCCTTSHHHHHHHHHHHHHHCSCC
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCceEEEEeeCCCHHHHHHHHHHHHHhcCCC
Confidence 4568999999 9999999999999999999999998765443321 257788899999763 222 368
Q ss_pred ceeeEEEEecCCCCC--CC--ChhhhHHHHHH----------HHhhcCCc----cEEEEEccceeecCCCCccccCCCCC
Q 017914 122 KNYTHLLVSIPPLEG--TG--DPMLKHGELLR----------STLMNGHL----QWLGYLSSTGVYGHSGGAWVDEDYPA 183 (364)
Q Consensus 122 d~v~~~~~~~~~~~~--~~--~~~~~~~~~l~----------~a~~~~~~----~r~v~~Ss~~vy~~~~~~~~~E~~~~ 183 (364)
|+++|+++....... .. +.......|+. ..+++.+. +++|++||...+....
T Consensus 107 D~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~g~iV~isS~~~~~~~~---------- 176 (276)
T 2b4q_A 107 DILVNNAGTSWGAALESYPVSGWEKVMQLNVTSVFSCIQQLLPLLRRSASAENPARVINIGSVAGISAMG---------- 176 (276)
T ss_dssp SEEEECCCCCCCCCTTSCCSHHHHHHHHHHTHHHHHHHHHHHHHHHHHCCSSSCEEEEEECCGGGTCCCC----------
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCEEEEECCHHHcCCCC----------
Confidence 999999976443211 11 11112222222 22223333 7999999976553211
Q ss_pred CCCC-hhHHHHHHHHHHHHHhhhh---cCCcEEEEEecceecCCCChH-HHHHHhcCcccccccccCCcccccccHHHHH
Q 017914 184 NPTT-ELGRLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRSSV-DTIIKQLPLSEGQKMRRARQYTSRIHVDDIC 258 (364)
Q Consensus 184 ~~~~-~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva 258 (364)
... .|+.+|...|.+.+.++.+ .|+++++++||.+..+..... ...... +.... ......+.+++|+|
T Consensus 177 -~~~~~Y~asK~a~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~--~~~~~----~~p~~r~~~p~dvA 249 (276)
T 2b4q_A 177 -EQAYAYGPSKAALHQLSRMLAKELVGEHINVNVIAPGRFPSRMTRHIANDPQAL--EADSA----SIPMGRWGRPEEMA 249 (276)
T ss_dssp -CSCTTHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSTTTHHHHHCHHHH--HHHHH----TSTTSSCCCHHHHH
T ss_pred -CCccccHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCcCcchhhcchhHHHH--HHhhc----CCCCCCcCCHHHHH
Confidence 123 7999999999999988754 489999999999987643211 000000 00000 00112358899999
Q ss_pred HHHHHHccCC---CCCceEEEeCCC
Q 017914 259 QVLSASIDKP---SAWNVYNVVDDD 280 (364)
Q Consensus 259 ~~~~~~l~~~---~~g~~~~i~~~~ 280 (364)
++++.++... -.|+++++.+|.
T Consensus 250 ~~v~~l~s~~~~~~tG~~i~vdGG~ 274 (276)
T 2b4q_A 250 ALAISLAGTAGAYMTGNVIPIDGGF 274 (276)
T ss_dssp HHHHHHHSGGGTTCCSCEEEESTTT
T ss_pred HHHHHHhCccccCCCCCEEEeCCCc
Confidence 9999998764 348999998774
|
| >2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.79 E-value=2e-18 Score=148.93 Aligned_cols=197 Identities=11% Similarity=0.032 Sum_probs=136.3
Q ss_pred CCeEEEEc-CChhhHHHHHHHHhCCC-------EEEEEEeCchhhhhhh------hCCceEEEccCChhhH--Hhh----
Q 017914 59 PNRMLILG-MGFVGRIFAEKIKNQGW-------VVSGTCTNVMKKKELE------QSGFDVHLFNANETAL--MIL---- 118 (364)
Q Consensus 59 ~~~vlVtG-tG~iG~~l~~~L~~~g~-------~V~~~~r~~~~~~~l~------~~~~~~~~~D~~~~~~--~~~---- 118 (364)
+++||||| +|+||++++++|+++|+ +|++++|+.++...+. ..++.++.+|++|.+. ..+
T Consensus 2 ~k~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~ 81 (244)
T 2bd0_A 2 KHILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHIV 81 (244)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHHHHHHHHccCCeeeEEEecCCCHHHHHHHHHHHH
Confidence 47899999 99999999999999999 9999999876654432 1357889999999763 222
Q ss_pred ---ccCceeeEEEEecCCCCCC----CChhhhHH------HHHHHHh----hcCCccEEEEEccceeecCCCCccccCCC
Q 017914 119 ---TTLKNYTHLLVSIPPLEGT----GDPMLKHG------ELLRSTL----MNGHLQWLGYLSSTGVYGHSGGAWVDEDY 181 (364)
Q Consensus 119 ---~~~d~v~~~~~~~~~~~~~----~~~~~~~~------~~l~~a~----~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~ 181 (364)
..+|.++|+++........ .+...... .++..++ ++.+.+++|++||...+..
T Consensus 82 ~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~---------- 151 (244)
T 2bd0_A 82 ERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAATKA---------- 151 (244)
T ss_dssp HHTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC----------
T ss_pred HhCCCCCEEEEcCCcCCcCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEEecchhcCC----------
Confidence 2689999999865332111 11111111 2233332 2345679999999876532
Q ss_pred CCCCCChhHHHHHHHHHHHHHhhh---hcCCcEEEEEecceecCCCChHHHHHHhcCcccccccccCCcccccccHHHHH
Q 017914 182 PANPTTELGRLRLSAEKGWLNLGR---DLGISAQVFRLGGIYGPGRSSVDTIIKQLPLSEGQKMRRARQYTSRIHVDDIC 258 (364)
Q Consensus 182 ~~~~~~~Y~~sK~~~E~~~~~~~~---~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva 258 (364)
..+...|+.+|...|.+++.++. ..|++++++|||.++++..... .. . . ...+++++|+|
T Consensus 152 -~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~---------~~--~----~-~~~~~~~~dva 214 (244)
T 2bd0_A 152 -FRHSSIYCMSKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWGKV---------DD--E----M-QALMMMPEDIA 214 (244)
T ss_dssp -CTTCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTTCCC---------CS--T----T-GGGSBCHHHHH
T ss_pred -CCCCchhHHHHHHHHHHHHHHHHHhhccCcEEEEEECCCccchhhhhc---------cc--c----c-cccCCCHHHHH
Confidence 12446899999999999877754 3589999999999998753211 00 0 0 12568999999
Q ss_pred HHHHHHccCCCC---CceEEEeCCCCC
Q 017914 259 QVLSASIDKPSA---WNVYNVVDDDPA 282 (364)
Q Consensus 259 ~~~~~~l~~~~~---g~~~~i~~~~~~ 282 (364)
++++.++..+.. |+++...+++.+
T Consensus 215 ~~~~~l~~~~~~~~~g~~~~~~~~~~~ 241 (244)
T 2bd0_A 215 APVVQAYLQPSRTVVEEIILRPTSGDI 241 (244)
T ss_dssp HHHHHHHTSCTTEEEEEEEEEETTCCC
T ss_pred HHHHHHHhCCccccchheEEecccccc
Confidence 999999987644 666666665544
|
| >2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A | Back alignment and structure |
|---|
Probab=99.79 E-value=3.6e-18 Score=146.86 Aligned_cols=203 Identities=12% Similarity=0.051 Sum_probs=134.9
Q ss_pred CCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCChhhH-H-------hhccCceeeEEEE
Q 017914 59 PNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETAL-M-------ILTTLKNYTHLLV 129 (364)
Q Consensus 59 ~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~-~-------~~~~~d~v~~~~~ 129 (364)
+|+||||| +|+||++++++|+++|++|++++|+.++... ..++.++.+|++|.+. . .+..+|.++|+++
T Consensus 2 ~k~vlVTGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~g~id~lv~~Ag 79 (239)
T 2ekp_A 2 ERKALVTGGSRGIGRAIAEALVARGYRVAIASRNPEEAAQ--SLGAVPLPTDLEKDDPKGLVKRALEALGGLHVLVHAAA 79 (239)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHH--HHTCEEEECCTTTSCHHHHHHHHHHHHTSCCEEEECCC
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHH--hhCcEEEecCCchHHHHHHHHHHHHHcCCCCEEEECCC
Confidence 57899999 9999999999999999999999998765221 1247889999998222 1 2247899999987
Q ss_pred ecCCCCCCCCh----hhhHHHH----------HHHHhhcCCccEEEEEccceeecCCCCccccCCCCCCCCChhHHHHHH
Q 017914 130 SIPPLEGTGDP----MLKHGEL----------LRSTLMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANPTTELGRLRLS 195 (364)
Q Consensus 130 ~~~~~~~~~~~----~~~~~~~----------l~~a~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~~sK~~ 195 (364)
........... ......| ++..+++.+.+++|++||...+.... ..+...|+.+|..
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~---------~~~~~~Y~~sK~a 150 (239)
T 2ekp_A 80 VNVRKPALELSYEEWRRVLYLHLDVAFLLAQAAAPHMAEAGWGRVLFIGSVTTFTAGG---------PVPIPAYTTAKTA 150 (239)
T ss_dssp CCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCT---------TSCCHHHHHHHHH
T ss_pred CCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhccCCC---------CCCCccHHHHHHH
Confidence 64322111111 1111112 22222345678999999987654321 1245689999999
Q ss_pred HHHHHHHhhhh---cCCcEEEEEecceecCCCChH---HHHHHhcCcccccccccCCcccccccHHHHHHHHHHHccCC-
Q 017914 196 AEKGWLNLGRD---LGISAQVFRLGGIYGPGRSSV---DTIIKQLPLSEGQKMRRARQYTSRIHVDDICQVLSASIDKP- 268 (364)
Q Consensus 196 ~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~- 268 (364)
.|.+.+.++.+ .|++++++|||.+.++..... ..+... +... .....+.+.+|+|++++.++...
T Consensus 151 ~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~--~~~~------~p~~~~~~~~dvA~~~~~l~s~~~ 222 (239)
T 2ekp_A 151 LLGLTRALAKEWARLGIRVNLLCPGYVETEFTLPLRQNPELYEP--ITAR------IPMGRWARPEEIARVAAVLCGDEA 222 (239)
T ss_dssp HHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTCHHHHHH--HHTT------CTTSSCBCHHHHHHHHHHHTSGGG
T ss_pred HHHHHHHHHHHhhhcCcEEEEEEeCCccCchhhccccCHHHHHH--HHhc------CCCCCCcCHHHHHHHHHHHcCchh
Confidence 99999888755 389999999999987642211 011110 0000 01123588999999999998753
Q ss_pred --CCCceEEEeCCC
Q 017914 269 --SAWNVYNVVDDD 280 (364)
Q Consensus 269 --~~g~~~~i~~~~ 280 (364)
-.|+.+++.+|.
T Consensus 223 ~~~tG~~~~vdgG~ 236 (239)
T 2ekp_A 223 EYLTGQAVAVDGGF 236 (239)
T ss_dssp TTCCSCEEEESTTT
T ss_pred cCCCCCEEEECCCc
Confidence 248899988763
|
| >1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.79 E-value=1.5e-18 Score=154.08 Aligned_cols=218 Identities=11% Similarity=-0.019 Sum_probs=143.6
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhh----h--C---CceEEEccCChhhH--Hhh------
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELE----Q--S---GFDVHLFNANETAL--MIL------ 118 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~----~--~---~~~~~~~D~~~~~~--~~~------ 118 (364)
..+++||||| +|+||++++++|+++|++|++++|+.++...+. . . ++.++.+|++|.+. ..+
T Consensus 24 l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 103 (297)
T 1xhl_A 24 FSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLAK 103 (297)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEEecCCCCHHHHHHHHHHHHHh
Confidence 4568899999 999999999999999999999999876654332 1 1 57889999999763 222
Q ss_pred -ccCceeeEEEEecCCCCC-CCC-h----hhhHHH------HHH----HHhhcCCccEEEEEccceeecCCCCccccCCC
Q 017914 119 -TTLKNYTHLLVSIPPLEG-TGD-P----MLKHGE------LLR----STLMNGHLQWLGYLSSTGVYGHSGGAWVDEDY 181 (364)
Q Consensus 119 -~~~d~v~~~~~~~~~~~~-~~~-~----~~~~~~------~l~----~a~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~ 181 (364)
..+|+++|+++....... ..+ . ...... ++. ..+.+.+ +++|++||...+...
T Consensus 104 ~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-g~IV~isS~~~~~~~--------- 173 (297)
T 1xhl_A 104 FGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTK-GEIVNVSSIVAGPQA--------- 173 (297)
T ss_dssp HSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEECCGGGSSSC---------
T ss_pred cCCCCEEEECCCcCcCCCCccccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC-CEEEEEcCchhccCC---------
Confidence 368999999876433210 111 1 111111 222 2222344 799999997655321
Q ss_pred CCCCCChhHHHHHHHHHHHHHhhh---hcCCcEEEEEecceecCCCChH----------HHHHHhcCcccccccccCCcc
Q 017914 182 PANPTTELGRLRLSAEKGWLNLGR---DLGISAQVFRLGGIYGPGRSSV----------DTIIKQLPLSEGQKMRRARQY 248 (364)
Q Consensus 182 ~~~~~~~Y~~sK~~~E~~~~~~~~---~~~~~~~ilRp~~v~g~~~~~~----------~~~~~~~~~~~~~~~~~~~~~ 248 (364)
..+...|+.+|...+.+.+.++. ..|+++++|+||.+.++..... ...... +... ...
T Consensus 174 -~~~~~~Y~asKaa~~~l~~~la~el~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~--~~~~------~p~ 244 (297)
T 1xhl_A 174 -HSGYPYYACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGS--RKEC------IPV 244 (297)
T ss_dssp -CTTSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHH--CTTT------CTT
T ss_pred -CCCcchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcCccccccccccccccchHHHHHH--HHhc------CCC
Confidence 01346899999999999988864 3589999999999987531110 001111 0000 112
Q ss_pred cccccHHHHHHHHHHHccCC----CCCceEEEeCCCCCCHHHHHHHHHH
Q 017914 249 TSRIHVDDICQVLSASIDKP----SAWNVYNVVDDDPAPREEVFAYAWD 293 (364)
Q Consensus 249 ~~~i~v~Dva~~~~~~l~~~----~~g~~~~i~~~~~~s~~el~~~i~~ 293 (364)
..+.+++|+|++++.++... -.|+.+++.+|..+.+.+.+..+.+
T Consensus 245 ~r~~~pedvA~~v~~l~s~~~~~~itG~~i~vdGG~~~~~~~~~~~~~~ 293 (297)
T 1xhl_A 245 GHCGKPEEIANIIVFLADRNLSSYIIGQSIVADGGSTLVMGMQTHDLMS 293 (297)
T ss_dssp SSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGGGCCGGGGSCHHH
T ss_pred CCCcCHHHHHHHHHHHhCCcccCCccCcEEEECCCccccccccccchhh
Confidence 34688999999999998753 3489999988876665554444443
|
| >1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.79 E-value=1.9e-18 Score=149.58 Aligned_cols=199 Identities=15% Similarity=0.060 Sum_probs=129.1
Q ss_pred CCCeEEEEc-CChhhHHHHHHHHhCC--CEEEEEEeCchhhhhhhh---CCceEEEccCChhhH--Hhhc---------c
Q 017914 58 SPNRMLILG-MGFVGRIFAEKIKNQG--WVVSGTCTNVMKKKELEQ---SGFDVHLFNANETAL--MILT---------T 120 (364)
Q Consensus 58 ~~~~vlVtG-tG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~l~~---~~~~~~~~D~~~~~~--~~~~---------~ 120 (364)
.+++||||| +|+||++++++|+++| ++|++++|+.++.+.+.+ .++.++.+|++|.+. ..++ .
T Consensus 2 ~~k~vlItGasggiG~~la~~l~~~g~~~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~~ 81 (250)
T 1yo6_A 2 SPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSRVHVLPLTVTCDKSLDTFVSKVGEIVGSDG 81 (250)
T ss_dssp CCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHTCCCTTEEEEECCTTCHHHHHHHHHHHHHHHGGGC
T ss_pred CCCEEEEecCCchHHHHHHHHHHhcCCCcEEEEEecCHHHHHHHHhccCCceEEEEeecCCHHHHHHHHHHHHHhcCCCC
Confidence 357899999 9999999999999999 999999998776555432 367899999999763 3332 7
Q ss_pred CceeeEEEEecCCCCCCC-----ChhhhHHH------HHHHHhh----cC------C-----ccEEEEEccceeecCCCC
Q 017914 121 LKNYTHLLVSIPPLEGTG-----DPMLKHGE------LLRSTLM----NG------H-----LQWLGYLSSTGVYGHSGG 174 (364)
Q Consensus 121 ~d~v~~~~~~~~~~~~~~-----~~~~~~~~------~l~~a~~----~~------~-----~~r~v~~Ss~~vy~~~~~ 174 (364)
+|.++|+++......... +....... ++..++. +. + ..+||++||...+.....
T Consensus 82 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~ 161 (250)
T 1yo6_A 82 LSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITDNT 161 (250)
T ss_dssp CCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGGCSTTCC
T ss_pred CcEEEECCcccCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcccccCCCcccCCCcEEEEeccCccccCCcc
Confidence 999999998654111111 11111122 2222222 22 3 679999999765432211
Q ss_pred ccccCCCCCCCCChhHHHHHHHHHHHHHhhhhc---CCcEEEEEecceecCCCChHHHHHHhcCcccccccccCCccccc
Q 017914 175 AWVDEDYPANPTTELGRLRLSAEKGWLNLGRDL---GISAQVFRLGGIYGPGRSSVDTIIKQLPLSEGQKMRRARQYTSR 251 (364)
Q Consensus 175 ~~~~E~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (364)
+..+..+...|+.+|...|.+++.++.+. |+++++++||.+.++.... ..+
T Consensus 162 ----~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~----------------------~~~ 215 (250)
T 1yo6_A 162 ----SGSAQFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNLGGK----------------------NAA 215 (250)
T ss_dssp ----STTSSSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC--------------------------------
T ss_pred ----cccccCCccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEcCCceecCCCCC----------------------CCC
Confidence 11222355789999999999999887654 8999999999986653210 124
Q ss_pred ccHHHHHHHHHHHccCCC---CCceEEEeCCCCCC
Q 017914 252 IHVDDICQVLSASIDKPS---AWNVYNVVDDDPAP 283 (364)
Q Consensus 252 i~v~Dva~~~~~~l~~~~---~g~~~~i~~~~~~s 283 (364)
++.+|+|++++.++.... .|+.+.+ ++..++
T Consensus 216 ~~~~~~a~~~~~~~~~~~~~~~G~~~~~-~g~~~~ 249 (250)
T 1yo6_A 216 LTVEQSTAELISSFNKLDNSHNGRFFMR-NLKPYE 249 (250)
T ss_dssp ---HHHHHHHHHHHTTCCGGGTTCEEET-TEEECC
T ss_pred CCHHHHHHHHHHHHhcccccCCCeEEEE-CCcCCC
Confidence 789999999999998764 3655554 333343
|
| >1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A* | Back alignment and structure |
|---|
Probab=99.79 E-value=3e-18 Score=149.28 Aligned_cols=212 Identities=6% Similarity=-0.100 Sum_probs=134.5
Q ss_pred CCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchh-hhhhh-------hCCceEEEccCChhhH--Hhh-------c
Q 017914 58 SPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMK-KKELE-------QSGFDVHLFNANETAL--MIL-------T 119 (364)
Q Consensus 58 ~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~-~~~l~-------~~~~~~~~~D~~~~~~--~~~-------~ 119 (364)
.+++||||| +|+||+++++.|+++|++|++++|+.+. ...+. ..++.++.+|++|.+. ..+ .
T Consensus 3 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 82 (260)
T 1x1t_A 3 KGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQMG 82 (260)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHhccCCcEEEEECCCCCHHHHHHHHHHHHHhcC
Confidence 458999999 9999999999999999999999998765 43321 2357788999999763 222 3
Q ss_pred cCceeeEEEEecCCCCCCC----ChhhhHHHH------HHH----HhhcCCccEEEEEccceeecCCCCccccCCCCCCC
Q 017914 120 TLKNYTHLLVSIPPLEGTG----DPMLKHGEL------LRS----TLMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANP 185 (364)
Q Consensus 120 ~~d~v~~~~~~~~~~~~~~----~~~~~~~~~------l~~----a~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~ 185 (364)
.+|+++|+++......... +.......| +.. .+++.+.+++|++||...+... .+
T Consensus 83 ~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~ 151 (260)
T 1x1t_A 83 RIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLVAS-----------AN 151 (260)
T ss_dssp CCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC-----------TT
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECcHHhCcCC-----------CC
Confidence 6899999998643221111 111111122 222 2234456799999997654321 23
Q ss_pred CChhHHHHHHHHHHHHHhhhh---cCCcEEEEEecceecCCCChH-HHHHHhcCc---cccccc-ccCCcccccccHHHH
Q 017914 186 TTELGRLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRSSV-DTIIKQLPL---SEGQKM-RRARQYTSRIHVDDI 257 (364)
Q Consensus 186 ~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~-~~~~~~~~~---~~~~~~-~~~~~~~~~i~v~Dv 257 (364)
...|+.+|...+.+.+.++.+ .|+++++++||.+.++..... ......... ...... ........+.+++|+
T Consensus 152 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p~dv 231 (260)
T 1x1t_A 152 KSAYVAAKHGVVGFTKVTALETAGQGITANAICPGWVRTPLVEKQISALAEKNGVDQETAARELLSEKQPSLQFVTPEQL 231 (260)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC------------------------CHHHHCTTCCCBCHHHH
T ss_pred CchHHHHHHHHHHHHHHHHHHhccCCEEEEEEeecCccCchHHHhhhhhccccCCchHHHHHHHhhccCCCCCCcCHHHH
Confidence 468999999999999888754 389999999999987642211 100000000 000000 000112346899999
Q ss_pred HHHHHHHccCC---CCCceEEEeCCC
Q 017914 258 CQVLSASIDKP---SAWNVYNVVDDD 280 (364)
Q Consensus 258 a~~~~~~l~~~---~~g~~~~i~~~~ 280 (364)
|++++.++... -.|+.|++.+|.
T Consensus 232 a~~~~~l~s~~~~~~tG~~~~vdgG~ 257 (260)
T 1x1t_A 232 GGTAVFLASDAAAQITGTTVSVDGGW 257 (260)
T ss_dssp HHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred HHHHHHHhChhhcCCCCCEEEECCCc
Confidence 99999998754 348899998763
|
| >3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.79 E-value=2.5e-18 Score=150.99 Aligned_cols=212 Identities=11% Similarity=-0.012 Sum_probs=140.1
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhh---hCCceEEEccCChhhH--Hhh-------ccCce
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELE---QSGFDVHLFNANETAL--MIL-------TTLKN 123 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~---~~~~~~~~~D~~~~~~--~~~-------~~~d~ 123 (364)
..+++||||| +|+||++++++|+++|++|++++|+.+....+. ..++.++.+|++|.+. ..+ ..+|+
T Consensus 27 l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~ 106 (277)
T 3gvc_A 27 LAGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKIGCGAAACRVDVSDEQQIIAMVDACVAAFGGVDK 106 (277)
T ss_dssp CTTCEEEETTTTSTHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHCSSCEEEECCTTCHHHHHHHHHHHHHHHSSCCE
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCcceEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence 4568999998 999999999999999999999999877655432 2467899999999763 222 36899
Q ss_pred eeEEEEecCCCCCCC----ChhhhHHHHHHH------H----hhcCCccEEEEEccceeecCCCCccccCCCCCCCCChh
Q 017914 124 YTHLLVSIPPLEGTG----DPMLKHGELLRS------T----LMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANPTTEL 189 (364)
Q Consensus 124 v~~~~~~~~~~~~~~----~~~~~~~~~l~~------a----~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y 189 (364)
++|+++......... +.......|+.. + +.+.+..++|++||...+.. ..+...|
T Consensus 107 lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~-----------~~~~~~Y 175 (277)
T 3gvc_A 107 LVANAGVVHLASLIDTTVEDFDRVIAINLRGAWLCTKHAAPRMIERGGGAIVNLSSLAGQVA-----------VGGTGAY 175 (277)
T ss_dssp EEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSC-----------CTTBHHH
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccC-----------CCCchhH
Confidence 999998654322111 111122223322 2 23455678999999764422 2234689
Q ss_pred HHHHHHHHHHHHHhhhh---cCCcEEEEEecceecCCCChHHHHHHhcCccccccccc---CCcccccccHHHHHHHHHH
Q 017914 190 GRLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRSSVDTIIKQLPLSEGQKMRR---ARQYTSRIHVDDICQVLSA 263 (364)
Q Consensus 190 ~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~i~v~Dva~~~~~ 263 (364)
+.+|...+.+.+.++.+ .|+++++|+||.+.++.. ........-........ ......+.+++|+|++++.
T Consensus 176 ~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~---~~~~~~~~~~~~~~~~~~~~~~~~~r~~~pedvA~~v~~ 252 (277)
T 3gvc_A 176 GMSKAGIIQLSRITAAELRSSGIRSNTLLPAFVDTPMQ---QTAMAMFDGALGAGGARSMIARLQGRMAAPEEMAGIVVF 252 (277)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHH---HHHHTCC------CCHHHHHHHHHSSCBCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCccCchH---HHhhhcchhhHHHHhhhhhhhccccCCCCHHHHHHHHHH
Confidence 99999999999887654 589999999999987531 11111000000000000 0111345789999999999
Q ss_pred HccCC---CCCceEEEeCCCCC
Q 017914 264 SIDKP---SAWNVYNVVDDDPA 282 (364)
Q Consensus 264 ~l~~~---~~g~~~~i~~~~~~ 282 (364)
++... -.|+++++.+|...
T Consensus 253 L~s~~a~~itG~~i~vdGG~~~ 274 (277)
T 3gvc_A 253 LLSDDASMITGTTQIADGGTIA 274 (277)
T ss_dssp HHSGGGTTCCSCEEEESTTGGG
T ss_pred HcCCccCCccCcEEEECCcchh
Confidence 99764 34899999887543
|
| >2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.79 E-value=5.9e-18 Score=146.17 Aligned_cols=200 Identities=11% Similarity=-0.038 Sum_probs=134.8
Q ss_pred CCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEe-Cchhhhhh----h--hCCceEEEccCChhhH--Hhh-------cc
Q 017914 58 SPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCT-NVMKKKEL----E--QSGFDVHLFNANETAL--MIL-------TT 120 (364)
Q Consensus 58 ~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r-~~~~~~~l----~--~~~~~~~~~D~~~~~~--~~~-------~~ 120 (364)
.+++||||| +|+||++++++|+++|++|++++| +.++...+ . ..++.++.+|++|.+. ..+ ..
T Consensus 3 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 82 (246)
T 2uvd_A 3 KGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGSDAIAVRADVANAEDVTNMVKQTVDVFGQ 82 (246)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 468999999 999999999999999999999999 65544332 1 1357889999999763 222 36
Q ss_pred CceeeEEEEecCCCCCCC----ChhhhHHHH----------HHHHhhcCCccEEEEEccceeecCCCCccccCCCCCCCC
Q 017914 121 LKNYTHLLVSIPPLEGTG----DPMLKHGEL----------LRSTLMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANPT 186 (364)
Q Consensus 121 ~d~v~~~~~~~~~~~~~~----~~~~~~~~~----------l~~a~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~ 186 (364)
+|+++|+++......... +.......| ++..+++.+.+++|++||...+.... ..
T Consensus 83 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~-----------~~ 151 (246)
T 2uvd_A 83 VDILVNNAGVTKDNLLMRMKEEEWDTVINTNLKGVFLCTKAVSRFMMRQRHGRIVNIASVVGVTGNP-----------GQ 151 (246)
T ss_dssp CCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCT-----------TB
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCHHhcCCCC-----------CC
Confidence 899999987643211001 111111222 22333345668999999976542211 23
Q ss_pred ChhHHHHHHHHHHHHHhhhh---cCCcEEEEEecceecCCCCh-----HHHHHHhcCcccccccccCCcccccccHHHHH
Q 017914 187 TELGRLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRSS-----VDTIIKQLPLSEGQKMRRARQYTSRIHVDDIC 258 (364)
Q Consensus 187 ~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva 258 (364)
..|+.+|...+.+.+.++.+ .|+++++++||.+.++.... ...+.... ....+++++|+|
T Consensus 152 ~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~------------p~~~~~~~~dvA 219 (246)
T 2uvd_A 152 ANYVAAKAGVIGLTKTSAKELASRNITVNAIAPGFIATDMTDVLDENIKAEMLKLI------------PAAQFGEAQDIA 219 (246)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBGGGCSSCCCTTHHHHHHHTC------------TTCSCBCHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeccccCcchhhcCHHHHHHHHhcC------------CCCCCcCHHHHH
Confidence 67999999999998877643 48999999999997754221 11111110 112368999999
Q ss_pred HHHHHHccCC---CCCceEEEeCCC
Q 017914 259 QVLSASIDKP---SAWNVYNVVDDD 280 (364)
Q Consensus 259 ~~~~~~l~~~---~~g~~~~i~~~~ 280 (364)
++++.++... -.|+.+++.+|.
T Consensus 220 ~~~~~l~s~~~~~~tG~~~~vdgG~ 244 (246)
T 2uvd_A 220 NAVTFFASDQSKYITGQTLNVDGGM 244 (246)
T ss_dssp HHHHHHHSGGGTTCCSCEEEESTTS
T ss_pred HHHHHHcCchhcCCCCCEEEECcCc
Confidence 9999998754 248899998774
|
| >3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum} | Back alignment and structure |
|---|
Probab=99.79 E-value=6e-18 Score=148.53 Aligned_cols=208 Identities=7% Similarity=-0.111 Sum_probs=139.7
Q ss_pred CCCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhh------CCceEEEccCChhhH--Hhh-------c
Q 017914 56 WQSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQ------SGFDVHLFNANETAL--MIL-------T 119 (364)
Q Consensus 56 ~~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~------~~~~~~~~D~~~~~~--~~~-------~ 119 (364)
...+++||||| +|+||++++++|+++|++|++++|+.+..+.+.+ .++.++.+|++|.+. ..+ .
T Consensus 29 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g 108 (276)
T 3r1i_A 29 DLSGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGGKALPIRCDVTQPDQVRGMLDQMTGELG 108 (276)
T ss_dssp CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 45678999999 9999999999999999999999998776554322 367899999999764 222 3
Q ss_pred cCceeeEEEEecCCCCCCCChhhh----HHHHH------HHHh----hcCC-ccEEEEEccceeecCCCCccccCCCCCC
Q 017914 120 TLKNYTHLLVSIPPLEGTGDPMLK----HGELL------RSTL----MNGH-LQWLGYLSSTGVYGHSGGAWVDEDYPAN 184 (364)
Q Consensus 120 ~~d~v~~~~~~~~~~~~~~~~~~~----~~~~l------~~a~----~~~~-~~r~v~~Ss~~vy~~~~~~~~~E~~~~~ 184 (364)
.+|+++|+++.............. ...|+ ..++ .+.+ ..++|++||...+.... ..
T Consensus 109 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~~g~iv~isS~~~~~~~~---------~~ 179 (276)
T 3r1i_A 109 GIDIAVCNAGIVSVQAMLDMPLEEFQRIQDTNVTGVFLTAQAAARAMVDQGLGGTIITTASMSGHIINI---------PQ 179 (276)
T ss_dssp CCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCC---------SS
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcEEEEECchHhcccCC---------CC
Confidence 789999999865432211111111 12222 2222 2222 36899999875432111 11
Q ss_pred CCChhHHHHHHHHHHHHHhhhh---cCCcEEEEEecceecCCCChHHHHHHhcCcccccccccCCcccccccHHHHHHHH
Q 017914 185 PTTELGRLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRSSVDTIIKQLPLSEGQKMRRARQYTSRIHVDDICQVL 261 (364)
Q Consensus 185 ~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~ 261 (364)
+...|+.+|...+.+.+.++.+ .|+++++|+||.+..+............ . .......+..++|+|+++
T Consensus 180 ~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~--~------~~~p~~r~~~pedvA~~v 251 (276)
T 3r1i_A 180 QVSHYCTSKAAVVHLTKAMAVELAPHQIRVNSVSPGYIRTELVEPLADYHALW--E------PKIPLGRMGRPEELTGLY 251 (276)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTTGGGGGGHHHH--G------GGSTTSSCBCGGGSHHHH
T ss_pred CcchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCccccchHHHHHH--H------hcCCCCCCcCHHHHHHHH
Confidence 3468999999999999988765 5899999999999876533221111110 0 001112357789999999
Q ss_pred HHHccCC---CCCceEEEeCCC
Q 017914 262 SASIDKP---SAWNVYNVVDDD 280 (364)
Q Consensus 262 ~~~l~~~---~~g~~~~i~~~~ 280 (364)
+.++... -.|+++++.+|.
T Consensus 252 ~fL~s~~~~~itG~~i~vdGG~ 273 (276)
T 3r1i_A 252 LYLASAASSYMTGSDIVIDGGY 273 (276)
T ss_dssp HHHHSGGGTTCCSCEEEESTTT
T ss_pred HHHcCccccCccCcEEEECcCc
Confidence 9998754 348999998875
|
| >2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A* | Back alignment and structure |
|---|
Probab=99.79 E-value=7.3e-18 Score=145.85 Aligned_cols=207 Identities=10% Similarity=-0.046 Sum_probs=133.9
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCc-hhhhh-hhh--CCceEEEccCChhhH--Hh-------hccCc
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNV-MKKKE-LEQ--SGFDVHLFNANETAL--MI-------LTTLK 122 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~-~~~~~-l~~--~~~~~~~~D~~~~~~--~~-------~~~~d 122 (364)
..+++||||| +|+||++++++|+++|++|++++|+. ++... +.. .++.++.+|++|.+. .. +..+|
T Consensus 5 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id 84 (249)
T 2ew8_A 5 LKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIRNLGRRVLTVKCDVSQPGDVEAFGKQVISTFGRCD 84 (249)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHcCCCC
Confidence 4468999999 99999999999999999999999987 54332 222 357889999999763 22 24789
Q ss_pred eeeEEEEecCCCCCCC----ChhhhHHHHH------HHH----hhcCCccEEEEEccceeecCCCCccccCCCCCCCCCh
Q 017914 123 NYTHLLVSIPPLEGTG----DPMLKHGELL------RST----LMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANPTTE 188 (364)
Q Consensus 123 ~v~~~~~~~~~~~~~~----~~~~~~~~~l------~~a----~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~ 188 (364)
+++|+++......... +.......|+ ..+ +++.+.+++|++||...+... .+...
T Consensus 85 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~~~~ 153 (249)
T 2ew8_A 85 ILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWLKI-----------EAYTH 153 (249)
T ss_dssp EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSCC-----------SSCHH
T ss_pred EEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhccCC-----------CCchh
Confidence 9999997643321101 1111112222 222 344556899999998765321 23468
Q ss_pred hHHHHHHHHHHHHHhhhh---cCCcEEEEEecceecCCCC-hHHHHHHhcCcccccccccCCcccccccHHHHHHHHHHH
Q 017914 189 LGRLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRS-SVDTIIKQLPLSEGQKMRRARQYTSRIHVDDICQVLSAS 264 (364)
Q Consensus 189 Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~ 264 (364)
|+.+|...+.+.+.++.+ .|+++++|+||.+.++... .... ....... ... .....+.+++|+|++++.+
T Consensus 154 Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~--~~~~~~~--~~~--~~~~~~~~p~dva~~~~~l 227 (249)
T 2ew8_A 154 YISTKAANIGFTRALASDLGKDGITVNAIAPSLVRTATTEASALS--AMFDVLP--NML--QAIPRLQVPLDLTGAAAFL 227 (249)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCC----------------------CTT--SSSCSCCCTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcCcCccchhcccc--chhhHHH--Hhh--CccCCCCCHHHHHHHHHHH
Confidence 999999999999988754 4899999999999876422 1100 0000000 000 1123468899999999999
Q ss_pred ccCC---CCCceEEEeCCC
Q 017914 265 IDKP---SAWNVYNVVDDD 280 (364)
Q Consensus 265 l~~~---~~g~~~~i~~~~ 280 (364)
+... -.|+.+++.+|.
T Consensus 228 ~s~~~~~~tG~~~~vdGG~ 246 (249)
T 2ew8_A 228 ASDDASFITGQTLAVDGGM 246 (249)
T ss_dssp TSGGGTTCCSCEEEESSSC
T ss_pred cCcccCCCCCcEEEECCCc
Confidence 9753 348899998774
|
| >1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.79 E-value=6.5e-19 Score=153.94 Aligned_cols=212 Identities=8% Similarity=-0.019 Sum_probs=137.8
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhh----hh---hCCceEEEccCChhhH--Hhh-------c
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKE----LE---QSGFDVHLFNANETAL--MIL-------T 119 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~----l~---~~~~~~~~~D~~~~~~--~~~-------~ 119 (364)
..+++||||| +|+||++++++|+++|++|++++|+..+... +. ..++.++.+|++|.+. ..+ .
T Consensus 12 ~~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 91 (265)
T 1h5q_A 12 FVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDADLG 91 (265)
T ss_dssp CTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHSC
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCcchhhHHHHHHHHHhcCCeeEEEEeeCCCHHHHHHHHHHHHHhcC
Confidence 4567899999 9999999999999999999999996544321 11 2467889999999763 222 2
Q ss_pred cCceeeEEEEecCCCCCCC----ChhhhHHH------HHHHHhh----c-CCccEEEEEccceeecCCCCccccCCCCCC
Q 017914 120 TLKNYTHLLVSIPPLEGTG----DPMLKHGE------LLRSTLM----N-GHLQWLGYLSSTGVYGHSGGAWVDEDYPAN 184 (364)
Q Consensus 120 ~~d~v~~~~~~~~~~~~~~----~~~~~~~~------~l~~a~~----~-~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~ 184 (364)
.+|.++|+++......... +....... ++..++. + ...++||++||...+..... ...+..
T Consensus 92 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~----~~~~~~ 167 (265)
T 1h5q_A 92 PISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQS----SLNGSL 167 (265)
T ss_dssp SEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEE----ETTEEC
T ss_pred CCCEEEECCCcCCCCchhhCCHHHHHHHHhhhhHhHHHHHHHHHHHHHhcCCCceEEEeCCchhhccccc----cccccc
Confidence 4788999887543321111 11111122 2333322 2 22479999999765432110 012233
Q ss_pred CCChhHHHHHHHHHHHHHhhhh---cCCcEEEEEecceecCCCChH-HHHHHhcCcccccccccCCcccccccHHHHHHH
Q 017914 185 PTTELGRLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRSSV-DTIIKQLPLSEGQKMRRARQYTSRIHVDDICQV 260 (364)
Q Consensus 185 ~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~ 260 (364)
+...|+.+|...|.+++.++.+ .|++++++|||.++++..... ....... ... .....+++++|+|++
T Consensus 168 ~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~--~~~------~~~~~~~~~~dva~~ 239 (265)
T 1h5q_A 168 TQVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAHMDKKIRDHQ--ASN------IPLNRFAQPEEMTGQ 239 (265)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGSCHHHHHHH--HHT------CTTSSCBCGGGGHHH
T ss_pred cccccHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCccccccccccchhHHHHH--Hhc------CcccCCCCHHHHHHH
Confidence 5678999999999999988754 489999999999988753221 1111110 000 011235889999999
Q ss_pred HHHHccCC---CCCceEEEeCCC
Q 017914 261 LSASIDKP---SAWNVYNVVDDD 280 (364)
Q Consensus 261 ~~~~l~~~---~~g~~~~i~~~~ 280 (364)
++.++..+ -.|+.|++.+|.
T Consensus 240 ~~~l~~~~~~~~~G~~~~v~gG~ 262 (265)
T 1h5q_A 240 AILLLSDHATYMTGGEYFIDGGQ 262 (265)
T ss_dssp HHHHHSGGGTTCCSCEEEECTTG
T ss_pred HHhhccCchhcCcCcEEEecCCE
Confidence 99998764 348999998874
|
| >1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A* | Back alignment and structure |
|---|
Probab=99.79 E-value=2.4e-18 Score=149.36 Aligned_cols=202 Identities=8% Similarity=0.009 Sum_probs=133.7
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCE-EEEEEeCch--hhhhhhh----CCceEEEccCChh-hH--Hhh-------
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWV-VSGTCTNVM--KKKELEQ----SGFDVHLFNANET-AL--MIL------- 118 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~-V~~~~r~~~--~~~~l~~----~~~~~~~~D~~~~-~~--~~~------- 118 (364)
..+++||||| +|+||++++++|+++|++ |++++|+.. ....+.+ .++.++.+|++|. +. ..+
T Consensus 3 l~~k~vlVtGas~gIG~~~a~~l~~~G~~~v~~~~r~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 82 (254)
T 1sby_A 3 LTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQL 82 (254)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHHH
T ss_pred CCCcEEEEECCCChHHHHHHHHHHHCCCcEEEEEecCchHHHHHHHHHhCCCceEEEEEEecCCChHHHHHHHHHHHHhc
Confidence 3468999998 999999999999999996 999999763 2222221 3578899999986 42 222
Q ss_pred ccCceeeEEEEecCCCCCCCChhhhHHH------HHHHHhh----cCC---ccEEEEEccceeecCCCCccccCCCCCCC
Q 017914 119 TTLKNYTHLLVSIPPLEGTGDPMLKHGE------LLRSTLM----NGH---LQWLGYLSSTGVYGHSGGAWVDEDYPANP 185 (364)
Q Consensus 119 ~~~d~v~~~~~~~~~~~~~~~~~~~~~~------~l~~a~~----~~~---~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~ 185 (364)
..+|+++|+++.... .+....... ++..++. +.+ ..++|++||...+... ..
T Consensus 83 g~id~lv~~Ag~~~~----~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~ 147 (254)
T 1sby_A 83 KTVDILINGAGILDD----HQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNAI-----------HQ 147 (254)
T ss_dssp SCCCEEEECCCCCCT----TCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCC-----------TT
T ss_pred CCCCEEEECCccCCH----HHHhhhheeeehhHHHHHHHHHHHHHHhcCCCCCEEEEECchhhccCC-----------CC
Confidence 378999999975321 222222222 2333322 221 3689999998765322 23
Q ss_pred CChhHHHHHHHHHHHHHhhhh---cCCcEEEEEecceecCCCChHHHHHHhcCccc-ccccccCCcccccccHHHHHHHH
Q 017914 186 TTELGRLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRSSVDTIIKQLPLSE-GQKMRRARQYTSRIHVDDICQVL 261 (364)
Q Consensus 186 ~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~v~Dva~~~ 261 (364)
...|+.+|...|.+.+.++.+ .|+++++++||.+.++..... ..... ............+.+++|+|+++
T Consensus 148 ~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~dvA~~i 221 (254)
T 1sby_A 148 VPVYSASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTPLVHTF------NSWLDVEPRVAELLLSHPTQTSEQCGQNF 221 (254)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHSEEEEEEEECSEESHHHHSC------CCGGGSCTTHHHHHTTSCCEEHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHHhccCCeEEEEEecCCccCcccccc------chhhhhhHHHHHHHhcCCCCCHHHHHHHH
Confidence 468999999999999988754 589999999999987521000 00000 00000000012335899999999
Q ss_pred HHHccCCCCCceEEEeCC
Q 017914 262 SASIDKPSAWNVYNVVDD 279 (364)
Q Consensus 262 ~~~l~~~~~g~~~~i~~~ 279 (364)
+.+++....|++|++.+|
T Consensus 222 ~~~~~~~~~G~~~~v~gG 239 (254)
T 1sby_A 222 VKAIEANKNGAIWKLDLG 239 (254)
T ss_dssp HHHHHHCCTTCEEEEETT
T ss_pred HHHHHcCCCCCEEEEeCC
Confidence 999986677999999887
|
| >3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A* | Back alignment and structure |
|---|
Probab=99.79 E-value=3.4e-18 Score=148.69 Aligned_cols=205 Identities=12% Similarity=0.020 Sum_probs=137.3
Q ss_pred CCCeEEEEc-CChhhHHHHHHHHhCCCEEEEE-EeCchhhhhhh------hCCceEEEccCChhhH--Hhh-------cc
Q 017914 58 SPNRMLILG-MGFVGRIFAEKIKNQGWVVSGT-CTNVMKKKELE------QSGFDVHLFNANETAL--MIL-------TT 120 (364)
Q Consensus 58 ~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~-~r~~~~~~~l~------~~~~~~~~~D~~~~~~--~~~-------~~ 120 (364)
.+++||||| +|+||++++++|+++|++|+++ .|+.+....+. ..++.++.+|++|.+. ..+ ..
T Consensus 3 ~~k~vlVTGas~gIG~aia~~l~~~G~~vv~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 82 (258)
T 3oid_A 3 QNKCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLGVKVLVVKANVGQPAKIKEMFQQIDETFGR 82 (258)
T ss_dssp CCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEecCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 457899999 9999999999999999999997 77765544332 1367889999999763 222 36
Q ss_pred CceeeEEEEecCCCCCCCChhh----hHHHH------HHHH----hhcCCccEEEEEccceeecCCCCccccCCCCCCCC
Q 017914 121 LKNYTHLLVSIPPLEGTGDPML----KHGEL------LRST----LMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANPT 186 (364)
Q Consensus 121 ~d~v~~~~~~~~~~~~~~~~~~----~~~~~------l~~a----~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~ 186 (364)
+|+++|+++............. ....| +..+ +++.+..++|++||...+.. ..+.
T Consensus 83 id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~-----------~~~~ 151 (258)
T 3oid_A 83 LDVFVNNAASGVLRPVMELEETHWDWTMNINAKALLFCAQEAAKLMEKNGGGHIVSISSLGSIRY-----------LENY 151 (258)
T ss_dssp CCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEEEEGGGTSB-----------CTTC
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhhCCC-----------CCCc
Confidence 7999999875432211111111 12222 2222 24556679999999765422 2244
Q ss_pred ChhHHHHHHHHHHHHHhhhh---cCCcEEEEEecceecCCCChH---HHHHHhcCcccccccccCCcccccccHHHHHHH
Q 017914 187 TELGRLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRSSV---DTIIKQLPLSEGQKMRRARQYTSRIHVDDICQV 260 (364)
Q Consensus 187 ~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~ 260 (364)
..|+.+|...+.+.+.++.+ .|+++++++||.+..+..... ...... +. .......+.+++|+|++
T Consensus 152 ~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~--~~------~~~p~~r~~~~~dva~~ 223 (258)
T 3oid_A 152 TTVGVSKAALEALTRYLAVELSPKQIIVNAVSGGAIDTDALKHFPNREDLLED--AR------QNTPAGRMVEIKDMVDT 223 (258)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECCBCSGGGGGCTTHHHHHHH--HH------HHCTTSSCBCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcChhhhhcccCHHHHHH--HH------hcCCCCCCcCHHHHHHH
Confidence 78999999999999988765 379999999999987542111 111110 00 00112345789999999
Q ss_pred HHHHccCCC---CCceEEEeCCCC
Q 017914 261 LSASIDKPS---AWNVYNVVDDDP 281 (364)
Q Consensus 261 ~~~~l~~~~---~g~~~~i~~~~~ 281 (364)
++.++.... .|+++++.+|..
T Consensus 224 v~~L~s~~~~~itG~~i~vdGG~~ 247 (258)
T 3oid_A 224 VEFLVSSKADMIRGQTIIVDGGRS 247 (258)
T ss_dssp HHHHTSSTTTTCCSCEEEESTTGG
T ss_pred HHHHhCcccCCccCCEEEECCCcc
Confidence 999998653 389999988854
|
| >3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=99.79 E-value=6.1e-18 Score=148.86 Aligned_cols=217 Identities=10% Similarity=-0.047 Sum_probs=139.5
Q ss_pred CCCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeC------------chhhhhh----h--hCCceEEEccCChhhH-
Q 017914 56 WQSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTN------------VMKKKEL----E--QSGFDVHLFNANETAL- 115 (364)
Q Consensus 56 ~~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~------------~~~~~~l----~--~~~~~~~~~D~~~~~~- 115 (364)
...+++||||| +|+||++++++|+++|++|++++|+ .+..... . ...+.++.+|++|.+.
T Consensus 10 ~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v 89 (278)
T 3sx2_A 10 PLTGKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRIVARQADVRDRESL 89 (278)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTCCEEEEECCTTCHHHH
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhcCCeEEEEeCCCCCHHHH
Confidence 35678999999 9999999999999999999999987 2222211 1 1467899999999764
Q ss_pred -Hhh-------ccCceeeEEEEecCCCCCCCChhhhHHHH------HHHHh----hcC-CccEEEEEccceeecCCCCcc
Q 017914 116 -MIL-------TTLKNYTHLLVSIPPLEGTGDPMLKHGEL------LRSTL----MNG-HLQWLGYLSSTGVYGHSGGAW 176 (364)
Q Consensus 116 -~~~-------~~~d~v~~~~~~~~~~~~~~~~~~~~~~~------l~~a~----~~~-~~~r~v~~Ss~~vy~~~~~~~ 176 (364)
..+ ..+|+++|+++.........+.......| +..++ .+. ...++|++||...+.....
T Consensus 90 ~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~-- 167 (278)
T 3sx2_A 90 SAALQAGLDELGRLDIVVANAGIAPMSAGDDGWHDVIDVNLTGVYHTIKVAIPTLVKQGTGGSIVLISSSAGLAGVGS-- 167 (278)
T ss_dssp HHHHHHHHHHHCCCCEEEECCCCCCCSSTHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSCCCC--
T ss_pred HHHHHHHHHHcCCCCEEEECCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccHHhcCCCcc--
Confidence 222 37899999998654332111111222222 22222 222 2468999998764422110
Q ss_pred ccCCCCCCCCChhHHHHHHHHHHHHHhhhh---cCCcEEEEEecceecCCCCh--HHHHHHh-cC-cccccccccCCccc
Q 017914 177 VDEDYPANPTTELGRLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRSS--VDTIIKQ-LP-LSEGQKMRRARQYT 249 (364)
Q Consensus 177 ~~E~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~--~~~~~~~-~~-~~~~~~~~~~~~~~ 249 (364)
+..+...|+.+|...+.+.+.++.+ .|+++++|+||.+.++.... ....... .. ............ .
T Consensus 168 -----~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~ 241 (278)
T 3sx2_A 168 -----ADPGSVGYVAAKHGVVGLMRVYANLLAGQMIRVNSIHPSGVETPMINNEFTREWLAKMAAATDTPGAMGNAMP-V 241 (278)
T ss_dssp -----SSHHHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTTSSHHHHHHHHHHHHHCC--CTTSCSSS-C
T ss_pred -----CCCCchHhHHHHHHHHHHHHHHHHHHhccCcEEEEEecCCccCccchhhhHHHHHhhccchhhhhhhhhhhcC-c
Confidence 1112357999999999999988754 47999999999999876431 1111111 00 000011122222 5
Q ss_pred ccccHHHHHHHHHHHccCC---CCCceEEEeCCC
Q 017914 250 SRIHVDDICQVLSASIDKP---SAWNVYNVVDDD 280 (364)
Q Consensus 250 ~~i~v~Dva~~~~~~l~~~---~~g~~~~i~~~~ 280 (364)
.+++++|+|++++.++... -.|+++++.+|.
T Consensus 242 ~~~~p~dvA~~v~~l~s~~~~~itG~~i~vdGG~ 275 (278)
T 3sx2_A 242 EVLAPEDVANAVAWLVSDQARYITGVTLPVDAGF 275 (278)
T ss_dssp SSBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTT
T ss_pred CcCCHHHHHHHHHHHhCcccccccCCEEeECCCc
Confidence 6789999999999999754 348999998874
|
| >1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.79 E-value=8.8e-18 Score=146.81 Aligned_cols=206 Identities=12% Similarity=-0.049 Sum_probs=136.8
Q ss_pred CCCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhh-------hCCceEEEccCChhhH--Hhh-------
Q 017914 56 WQSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELE-------QSGFDVHLFNANETAL--MIL------- 118 (364)
Q Consensus 56 ~~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~-------~~~~~~~~~D~~~~~~--~~~------- 118 (364)
...+++||||| +|+||++++++|+++|++|++++|+.++...+. ...+.++.+|++|.+. ..+
T Consensus 18 ~l~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 97 (267)
T 1vl8_A 18 DLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEKF 97 (267)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 45568999999 999999999999999999999999876544321 1356788999999763 222
Q ss_pred ccCceeeEEEEecCCCCCCCCh----hhhHHHHH----------HHHhhcCCccEEEEEcccee-ecCCCCccccCCCCC
Q 017914 119 TTLKNYTHLLVSIPPLEGTGDP----MLKHGELL----------RSTLMNGHLQWLGYLSSTGV-YGHSGGAWVDEDYPA 183 (364)
Q Consensus 119 ~~~d~v~~~~~~~~~~~~~~~~----~~~~~~~l----------~~a~~~~~~~r~v~~Ss~~v-y~~~~~~~~~E~~~~ 183 (364)
..+|+++|+++........... ......|+ +..+++.+.+++|++||..+ +. +.
T Consensus 98 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~-----------~~ 166 (267)
T 1vl8_A 98 GKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEEV-----------TM 166 (267)
T ss_dssp SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGTCC-----------CS
T ss_pred CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCcchhcc-----------CC
Confidence 3689999998764432111111 11112222 22233556789999999752 21 11
Q ss_pred CCCChhHHHHHHHHHHHHHhhhh---cCCcEEEEEecceecCCCChHH---HHHHhcCcccccccccCCcccccccHHHH
Q 017914 184 NPTTELGRLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRSSVD---TIIKQLPLSEGQKMRRARQYTSRIHVDDI 257 (364)
Q Consensus 184 ~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~i~v~Dv 257 (364)
.+...|+.+|...|.+.+.++.+ .|+++++|+||.+.++...... ..... +.... ....+.+.+|+
T Consensus 167 ~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~--~~~~~------p~~~~~~p~dv 238 (267)
T 1vl8_A 167 PNISAYAASKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMTEAVFSDPEKLDY--MLKRI------PLGRTGVPEDL 238 (267)
T ss_dssp SSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTTTHHHHTCHHHHHH--HHHTC------TTSSCBCGGGG
T ss_pred CCChhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCccccccccccChHHHHH--HHhhC------CCCCCcCHHHH
Confidence 23468999999999999888754 4899999999999776422110 01100 00000 11235789999
Q ss_pred HHHHHHHccCC---CCCceEEEeCCC
Q 017914 258 CQVLSASIDKP---SAWNVYNVVDDD 280 (364)
Q Consensus 258 a~~~~~~l~~~---~~g~~~~i~~~~ 280 (364)
|++++.++... -.|+.+.+.+|.
T Consensus 239 A~~v~~l~s~~~~~itG~~i~vdGG~ 264 (267)
T 1vl8_A 239 KGVAVFLASEEAKYVTGQIIFVDGGW 264 (267)
T ss_dssp HHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred HHHHHHHcCccccCCcCCeEEECCCC
Confidence 99999998754 248899988763
|
| >1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.79 E-value=2.1e-17 Score=142.60 Aligned_cols=204 Identities=12% Similarity=-0.001 Sum_probs=136.7
Q ss_pred CCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhh-CCceEEEccCChhhH--Hhh-------ccCceeeE
Q 017914 58 SPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQ-SGFDVHLFNANETAL--MIL-------TTLKNYTH 126 (364)
Q Consensus 58 ~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~-~~~~~~~~D~~~~~~--~~~-------~~~d~v~~ 126 (364)
.++++|||| +|+||++++++|+++|++|++++|+.++...+.+ .++.++.+|++|.+. ..+ ..+|+++|
T Consensus 4 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lvn 83 (245)
T 1uls_A 4 KDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVGAHPVVMDVADPASVERGFAEALAHLGRLDGVVH 83 (245)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTTCEEEECCTTCHHHHHHHHHHHHHHHSSCCEEEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 458999999 9999999999999999999999998776554432 257889999999763 222 35899999
Q ss_pred EEEecCCCCCCCCh----hhhHHHHHH----------HHhhcCCccEEEEEccceeecCCCCccccCCCCCCCCChhHHH
Q 017914 127 LLVSIPPLEGTGDP----MLKHGELLR----------STLMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANPTTELGRL 192 (364)
Q Consensus 127 ~~~~~~~~~~~~~~----~~~~~~~l~----------~a~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~~s 192 (364)
+++........... ......|+. ..+++.+.+++|++||...++.. ....|+.+
T Consensus 84 ~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~------------~~~~Y~as 151 (245)
T 1uls_A 84 YAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTASRVYLGNL------------GQANYAAS 151 (245)
T ss_dssp CCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECCGGGGCCT------------TCHHHHHH
T ss_pred CCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEccchhcCCC------------CchhHHHH
Confidence 98764322111111 111122222 22234567899999997733221 23579999
Q ss_pred HHHHHHHHHHhhhh---cCCcEEEEEecceecCCCChH-HHHHHhcCcccccccccCCcccccccHHHHHHHHHHHccCC
Q 017914 193 RLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRSSV-DTIIKQLPLSEGQKMRRARQYTSRIHVDDICQVLSASIDKP 268 (364)
Q Consensus 193 K~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~ 268 (364)
|...+.+.+.++.+ .|+++++|+||.+..+....+ ...... +....+ ...+.+.+|+|++++.++...
T Consensus 152 K~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~--~~~~~p------~~~~~~~~dvA~~v~~l~s~~ 223 (245)
T 1uls_A 152 MAGVVGLTRTLALELGRWGIRVNTLAPGFIETRMTAKVPEKVREK--AIAATP------LGRAGKPLEVAYAALFLLSDE 223 (245)
T ss_dssp HHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTSSSCHHHHHH--HHHTCT------TCSCBCHHHHHHHHHHHHSGG
T ss_pred HHHHHHHHHHHHHHHhHhCeEEEEEEeCcCcCcchhhcCHHHHHH--HHhhCC------CCCCcCHHHHHHHHHHHhCch
Confidence 99999998887644 489999999999977642211 111110 000000 112578999999999998754
Q ss_pred ---CCCceEEEeCCCC
Q 017914 269 ---SAWNVYNVVDDDP 281 (364)
Q Consensus 269 ---~~g~~~~i~~~~~ 281 (364)
-.|+.+++.+|..
T Consensus 224 ~~~~tG~~~~vdgG~~ 239 (245)
T 1uls_A 224 SSFITGQVLFVDGGRT 239 (245)
T ss_dssp GTTCCSCEEEESTTTT
T ss_pred hcCCcCCEEEECCCcc
Confidence 3488999988753
|
| >3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E | Back alignment and structure |
|---|
Probab=99.79 E-value=3.9e-18 Score=147.43 Aligned_cols=205 Identities=11% Similarity=-0.024 Sum_probs=138.6
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhh---hCCceEEEccCChhhH--Hhh-------ccCce
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELE---QSGFDVHLFNANETAL--MIL-------TTLKN 123 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~---~~~~~~~~~D~~~~~~--~~~-------~~~d~ 123 (364)
..++++|||| +|+||++++++|+++|++|++++|+.+....+. ......+.+|++|.+. ..+ ..+|+
T Consensus 7 l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~ 86 (248)
T 3op4_A 7 LEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGKGMALNVTNPESIEAVLKAITDEFGGVDI 86 (248)
T ss_dssp CTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHCCCSE
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcccceEEEEeCCCHHHHHHHHHHHHHHcCCCCE
Confidence 4568999999 999999999999999999999999877655432 2356789999999763 222 37899
Q ss_pred eeEEEEecCCCCCCC----ChhhhHHHH------HHHH----hhcCCccEEEEEccceeecCCCCccccCCCCCCCCChh
Q 017914 124 YTHLLVSIPPLEGTG----DPMLKHGEL------LRST----LMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANPTTEL 189 (364)
Q Consensus 124 v~~~~~~~~~~~~~~----~~~~~~~~~------l~~a----~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y 189 (364)
++|+++......... +.......| +..+ +.+.+..++|++||...+... .+...|
T Consensus 87 lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~-----------~~~~~Y 155 (248)
T 3op4_A 87 LVNNAGITRDNLLMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKKRQGRIINVGSVVGTMGN-----------AGQANY 155 (248)
T ss_dssp EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCC-----------TTCHHH
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcCCC-----------CCChHH
Confidence 999998654322111 111112222 2222 223456799999997654221 234689
Q ss_pred HHHHHHHHHHHHHhhhh---cCCcEEEEEecceecCCCChH-HHHHHhcCcccccccccCCcccccccHHHHHHHHHHHc
Q 017914 190 GRLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRSSV-DTIIKQLPLSEGQKMRRARQYTSRIHVDDICQVLSASI 265 (364)
Q Consensus 190 ~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l 265 (364)
+.+|...+.+.+.++.+ .|+++++++||.+..+....+ ...... . ........+.+++|+|++++.++
T Consensus 156 ~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~--~------~~~~p~~r~~~p~dva~~v~~L~ 227 (248)
T 3op4_A 156 AAAKAGVIGFTKSMAREVASRGVTVNTVAPGFIETDMTKALNDEQRTA--T------LAQVPAGRLGDPREIASAVAFLA 227 (248)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSTTTTTSCHHHHHH--H------HHTCTTCSCBCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhCeEEEEEeeCCCCCchhhhcCHHHHHH--H------HhcCCCCCCcCHHHHHHHHHHHc
Confidence 99999999999888754 489999999999987643221 111100 0 00011234578999999999988
Q ss_pred cCCC---CCceEEEeCCC
Q 017914 266 DKPS---AWNVYNVVDDD 280 (364)
Q Consensus 266 ~~~~---~g~~~~i~~~~ 280 (364)
.... .|+++++.+|.
T Consensus 228 s~~~~~itG~~i~vdgG~ 245 (248)
T 3op4_A 228 SPEAAYITGETLHVNGGM 245 (248)
T ss_dssp SGGGTTCCSCEEEESTTS
T ss_pred CCccCCccCcEEEECCCe
Confidence 7542 38999998874
|
| >3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B} | Back alignment and structure |
|---|
Probab=99.79 E-value=9.2e-18 Score=146.93 Aligned_cols=210 Identities=8% Similarity=-0.007 Sum_probs=137.2
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCc-hhhhhh----h--hCCceEEEccCChhhH--Hhh-------c
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNV-MKKKEL----E--QSGFDVHLFNANETAL--MIL-------T 119 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~-~~~~~l----~--~~~~~~~~~D~~~~~~--~~~-------~ 119 (364)
..+++||||| +|+||++++++|+++|++|++++|+. +..... . ..++.++.+|++|.+. ..+ .
T Consensus 23 ~~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g 102 (269)
T 3gk3_A 23 QAKRVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERDAGRDFKAYAVDVADFESCERCAEKVLADFG 102 (269)
T ss_dssp -CCCEEEETTTTSHHHHHHHHHHHTTTCEEEEEECSCHHHHHHHHHHHHTTTCCCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred hcCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcC
Confidence 4567899999 99999999999999999999998543 332221 1 2468899999999763 222 3
Q ss_pred cCceeeEEEEecCCCCCCC----ChhhhHHHHH------HHH----hhcCCccEEEEEccceeecCCCCccccCCCCCCC
Q 017914 120 TLKNYTHLLVSIPPLEGTG----DPMLKHGELL------RST----LMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANP 185 (364)
Q Consensus 120 ~~d~v~~~~~~~~~~~~~~----~~~~~~~~~l------~~a----~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~ 185 (364)
.+|+++|+++......... +.......|+ ..+ +.+.+..++|++||...+.... +
T Consensus 103 ~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~-----------~ 171 (269)
T 3gk3_A 103 KVDVLINNAGITRDATFMKMTKGDWDAVMRTDLDAMFNVTKQFIAGMVERRFGRIVNIGSVNGSRGAF-----------G 171 (269)
T ss_dssp CCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCT-----------T
T ss_pred CCCEEEECCCcCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEeCChhhccCCC-----------C
Confidence 7899999998654322111 1111122222 222 2234567999999976543221 3
Q ss_pred CChhHHHHHHHHHHHHHhhhh---cCCcEEEEEecceecCCCChHHHHHHhcCcccccccccCCcccccccHHHHHHHHH
Q 017914 186 TTELGRLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRSSVDTIIKQLPLSEGQKMRRARQYTSRIHVDDICQVLS 262 (364)
Q Consensus 186 ~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~ 262 (364)
...|+.+|.+.+.+++.++.+ .|+++++++||.+..+.......-.....+ ........+.+++|+|++++
T Consensus 172 ~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~------~~~~~~~~~~~p~dvA~~v~ 245 (269)
T 3gk3_A 172 QANYASAKAGIHGFTKTLALETAKRGITVNTVSPGYLATAMVEAVPQDVLEAKI------LPQIPVGRLGRPDEVAALIA 245 (269)
T ss_dssp BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTC-------CCS------GGGCTTSSCBCHHHHHHHHH
T ss_pred cchHHHHHHHHHHHHHHHHHHhhhcCCEEEEEecCcccchhhhhhchhHHHHHh------hhcCCcCCccCHHHHHHHHH
Confidence 368999999999999888754 489999999999987653221110000001 11112234578999999999
Q ss_pred HHccCCC---CCceEEEeCCCCCC
Q 017914 263 ASIDKPS---AWNVYNVVDDDPAP 283 (364)
Q Consensus 263 ~~l~~~~---~g~~~~i~~~~~~s 283 (364)
.++.... .|+++++.+|..++
T Consensus 246 ~L~s~~~~~itG~~i~vdgG~~~s 269 (269)
T 3gk3_A 246 FLCSDDAGFVTGADLAINGGMHMS 269 (269)
T ss_dssp HHTSTTCTTCCSCEEEESTTSCCC
T ss_pred HHhCCCcCCeeCcEEEECCCEeCc
Confidence 9998653 38999999886553
|
| >3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.78 E-value=4.5e-18 Score=149.06 Aligned_cols=203 Identities=8% Similarity=-0.029 Sum_probs=138.0
Q ss_pred CCCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhh---hhh--CCceEEEccCChhhH--Hhh------ccC
Q 017914 56 WQSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKE---LEQ--SGFDVHLFNANETAL--MIL------TTL 121 (364)
Q Consensus 56 ~~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~---l~~--~~~~~~~~D~~~~~~--~~~------~~~ 121 (364)
...+++||||| +|+||++++++|+++|++|++++|+...... +.. ..+.++.+|++|.+. ... ..+
T Consensus 28 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~g~i 107 (273)
T 3uf0_A 28 SLAGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRTDGVKEVADEIADGGGSAEAVVADLADLEGAANVAEELAATRRV 107 (273)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTHHHHHHHHHHTTTCEEEEEECCTTCHHHHHHHHHHHHHHSCC
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHhcCCC
Confidence 35578999999 9999999999999999999999976432221 211 357889999999763 111 368
Q ss_pred ceeeEEEEecCCCCCCC----ChhhhHHHH------HHHH----hhcCCccEEEEEccceeecCCCCccccCCCCCCCCC
Q 017914 122 KNYTHLLVSIPPLEGTG----DPMLKHGEL------LRST----LMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANPTT 187 (364)
Q Consensus 122 d~v~~~~~~~~~~~~~~----~~~~~~~~~------l~~a----~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~ 187 (364)
|+++|+++......... +.......| +..+ +.+.+..++|++||...+... .+..
T Consensus 108 D~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~-----------~~~~ 176 (273)
T 3uf0_A 108 DVLVNNAGIIARAPAEEVSLGRWREVLTVNLDAAWVLSRSFGTAMLAHGSGRIVTIASMLSFQGG-----------RNVA 176 (273)
T ss_dssp CEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC-----------SSCH
T ss_pred cEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchHhcCCC-----------CCCh
Confidence 99999988654322111 111112222 2222 234456799999997654221 2346
Q ss_pred hhHHHHHHHHHHHHHhhhh---cCCcEEEEEecceecCCCChH-------HHHHHhcCcccccccccCCcccccccHHHH
Q 017914 188 ELGRLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRSSV-------DTIIKQLPLSEGQKMRRARQYTSRIHVDDI 257 (364)
Q Consensus 188 ~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dv 257 (364)
.|+.+|...+.+.+.++.+ .|+++++|+||.+.++..... ..+.... ....+.+++|+
T Consensus 177 ~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~------------p~~r~~~pedv 244 (273)
T 3uf0_A 177 AYAASKHAVVGLTRALASEWAGRGVGVNALAPGYVVTANTAALRADDERAAEITARI------------PAGRWATPEDM 244 (273)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTSHHHHHHHHHHS------------TTSSCBCGGGG
T ss_pred hHHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCCchhhcccCHHHHHHHHhcC------------CCCCCCCHHHH
Confidence 8999999999999988765 589999999999987643211 1111111 11335789999
Q ss_pred HHHHHHHccCC---CCCceEEEeCCCC
Q 017914 258 CQVLSASIDKP---SAWNVYNVVDDDP 281 (364)
Q Consensus 258 a~~~~~~l~~~---~~g~~~~i~~~~~ 281 (364)
|++++.++... -.|+++++.+|..
T Consensus 245 a~~v~~L~s~~a~~itG~~i~vdGG~~ 271 (273)
T 3uf0_A 245 VGPAVFLASDAASYVHGQVLAVDGGWL 271 (273)
T ss_dssp HHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred HHHHHHHhCchhcCCcCCEEEECcCcc
Confidence 99999998754 3489999988754
|
| >3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.78 E-value=6.1e-18 Score=147.63 Aligned_cols=213 Identities=10% Similarity=0.003 Sum_probs=139.7
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhh------CCceEEEccCChhhH--Hhh-------cc
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQ------SGFDVHLFNANETAL--MIL-------TT 120 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~------~~~~~~~~D~~~~~~--~~~-------~~ 120 (364)
..++++|||| +|+||++++++|+++|++|++++|+.++...+.. .++.++.+|++|.+. ..+ ..
T Consensus 9 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 88 (264)
T 3ucx_A 9 LTDKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTGRRALSVGTDITDDAQVAHLVDETMKAYGR 88 (264)
T ss_dssp TTTCEEEEESCCTTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTSC
T ss_pred cCCcEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 4568999999 9999999999999999999999998776544321 367889999999764 222 36
Q ss_pred CceeeEEEEecCCCCCCCC-----hhhhHHHH------HHHHh----hcCCccEEEEEccceeecCCCCccccCCCCCCC
Q 017914 121 LKNYTHLLVSIPPLEGTGD-----PMLKHGEL------LRSTL----MNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANP 185 (364)
Q Consensus 121 ~d~v~~~~~~~~~~~~~~~-----~~~~~~~~------l~~a~----~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~ 185 (364)
+|+++|+++.........+ .......| +..++ .+.+ .++|++||...+.. ...
T Consensus 89 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~-----------~~~ 156 (264)
T 3ucx_A 89 VDVVINNAFRVPSMKPFANTTFEHMRDAIELTVFGALRLIQGFTPALEESK-GAVVNVNSMVVRHS-----------QAK 156 (264)
T ss_dssp CSEEEECCCSCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHT-CEEEEECCGGGGCC-----------CTT
T ss_pred CcEEEECCCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CEEEEECcchhccC-----------CCc
Confidence 8999999876433222111 11112222 22222 2223 69999999765422 123
Q ss_pred CChhHHHHHHHHHHHHHhhhh---cCCcEEEEEecceecCCCChH-HHHHHhcCccc---ccccccCCcccccccHHHHH
Q 017914 186 TTELGRLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRSSV-DTIIKQLPLSE---GQKMRRARQYTSRIHVDDIC 258 (364)
Q Consensus 186 ~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~-~~~~~~~~~~~---~~~~~~~~~~~~~i~v~Dva 258 (364)
...|+.+|...+.+.+.++.+ .|+++++++||.++++..... ........... ............+.+++|+|
T Consensus 157 ~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA 236 (264)
T 3ucx_A 157 YGAYKMAKSALLAMSQTLATELGEKGIRVNSVLPGYIWGGTLKSYFEHQAGKYGTSVEDIYNAAAAGSDLKRLPTEDEVA 236 (264)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEESSCBSHHHHHHHHHHHHHTTCCHHHHHHHHHTTSSSSSCCBHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHhCccCeEEEEEecCccccccHHHHHHhhhhhcCCCHHHHHHHHhccCCcccCCCHHHHH
Confidence 468999999999999988765 589999999999987642111 10000000000 00001112234468899999
Q ss_pred HHHHHHccCC---CCCceEEEeCCCC
Q 017914 259 QVLSASIDKP---SAWNVYNVVDDDP 281 (364)
Q Consensus 259 ~~~~~~l~~~---~~g~~~~i~~~~~ 281 (364)
++++.++... -.|+++++.+|..
T Consensus 237 ~~v~~L~s~~~~~itG~~i~vdGG~~ 262 (264)
T 3ucx_A 237 SAILFMASDLASGITGQALDVNCGEY 262 (264)
T ss_dssp HHHHHHHSGGGTTCCSCEEEESTTSS
T ss_pred HHHHHHcCccccCCCCCEEEECCCcc
Confidence 9999998754 3489999988864
|
| >3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis} | Back alignment and structure |
|---|
Probab=99.78 E-value=3.9e-18 Score=151.08 Aligned_cols=218 Identities=11% Similarity=-0.028 Sum_probs=142.4
Q ss_pred cCCCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhh---CCceEEEccCChhhH--Hhhc---cCceee
Q 017914 55 EWQSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQ---SGFDVHLFNANETAL--MILT---TLKNYT 125 (364)
Q Consensus 55 ~~~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~---~~~~~~~~D~~~~~~--~~~~---~~d~v~ 125 (364)
....+++||||| +|+||++++++|+++|++|++++|+.++...+.. .++.++.+|++|.+. ..++ .+|+++
T Consensus 12 ~~l~gk~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~iD~lv 91 (291)
T 3rd5_A 12 PSFAQRTVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTMAGQVEVRELDLQDLSSVRRFADGVSGADVLI 91 (291)
T ss_dssp CCCTTCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTSSSEEEEEECCTTCHHHHHHHHHTCCCEEEEE
T ss_pred cCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCeeEEEcCCCCHHHHHHHHHhcCCCCEEE
Confidence 345678999999 9999999999999999999999999877655432 367899999999774 3333 679999
Q ss_pred EEEEecCCCCC--CCChhhhHH------HHHHHHhhcCCccEEEEEccceeecCCCC--ccccCCCCCCCCChhHHHHHH
Q 017914 126 HLLVSIPPLEG--TGDPMLKHG------ELLRSTLMNGHLQWLGYLSSTGVYGHSGG--AWVDEDYPANPTTELGRLRLS 195 (364)
Q Consensus 126 ~~~~~~~~~~~--~~~~~~~~~------~~l~~a~~~~~~~r~v~~Ss~~vy~~~~~--~~~~E~~~~~~~~~Y~~sK~~ 195 (364)
|+|+....... ..+...... .++..++.....+|+|++||...+..... ....+..+..+...|+.+|.+
T Consensus 92 ~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~riv~isS~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a 171 (291)
T 3rd5_A 92 NNAGIMAVPYALTVDGFESQIGTNHLGHFALTNLLLPRLTDRVVTVSSMAHWPGRINLEDLNWRSRRYSPWLAYSQSKLA 171 (291)
T ss_dssp ECCCCCSCCCCBCTTSCBHHHHHHTHHHHHHHHHHGGGEEEEEEEECCGGGTTCCCCSSCTTCSSSCCCHHHHHHHHHHH
T ss_pred ECCcCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhheeEeechhhccCCCCcccccccccCCCCcchHHHHHHH
Confidence 99887543321 122222223 34455555555679999999876643211 112222344556789999999
Q ss_pred HHHHHHHhhhhc---C--CcEEEEEecceecCCCChHHHHHHhcCcccccccccCCcccccccHHHHHHHHHHHccCCC-
Q 017914 196 AEKGWLNLGRDL---G--ISAQVFRLGGIYGPGRSSVDTIIKQLPLSEGQKMRRARQYTSRIHVDDICQVLSASIDKPS- 269 (364)
Q Consensus 196 ~E~~~~~~~~~~---~--~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~- 269 (364)
.+.+.+.++.+. | ++++.++||.+..+............ +. .....+-..+.+|+|++++.++..+.
T Consensus 172 ~~~~~~~la~e~~~~g~~i~v~~v~PG~v~T~~~~~~~~~~~~~-~~------~~~~~~~~~~~~~~A~~~~~l~~~~~~ 244 (291)
T 3rd5_A 172 NLLFTSELQRRLTAAGSPLRALAAHPGYSHTNLQGASGRKLGDA-LM------SAATRVVATDADFGARQTLYAASQDLP 244 (291)
T ss_dssp HHHHHHHHHHHHHHTTCCCEEEEECCSGGGSCC---------------------------CHHHHHHHHHHHHHHHSCCC
T ss_pred HHHHHHHHHHHHhhCCCCEEEEEeeCCCCccccccccchHHHHH-HH------HHHHHHHhCCHHHHHHHHHHHHcCCCC
Confidence 999998887553 4 99999999998765422211000000 00 00011222458999999999988763
Q ss_pred CCceEEEeCC
Q 017914 270 AWNVYNVVDD 279 (364)
Q Consensus 270 ~g~~~~i~~~ 279 (364)
.|+.+++.+|
T Consensus 245 ~G~~~~vdgG 254 (291)
T 3rd5_A 245 GDSFVGPRFG 254 (291)
T ss_dssp TTCEEEETTS
T ss_pred CCceeCCccc
Confidence 3777777554
|
| >3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides} | Back alignment and structure |
|---|
Probab=99.78 E-value=6.7e-19 Score=153.76 Aligned_cols=209 Identities=13% Similarity=-0.011 Sum_probs=137.6
Q ss_pred CCCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCChhhH--Hh-------hccCceee
Q 017914 56 WQSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETAL--MI-------LTTLKNYT 125 (364)
Q Consensus 56 ~~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~--~~-------~~~~d~v~ 125 (364)
...+++||||| +|+||++++++|+++|++|++++|+.+.... ...+.+|++|.+. .. +..+|+++
T Consensus 25 ~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~-----~~~~~~Dv~~~~~~~~~~~~~~~~~g~iD~lv 99 (266)
T 3uxy_A 25 GFEGKVALVTGAAGGIGGAVVTALRAAGARVAVADRAVAGIAA-----DLHLPGDLREAAYADGLPGAVAAGLGRLDIVV 99 (266)
T ss_dssp -CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECSSCCTTSCC-----SEECCCCTTSHHHHHHHHHHHHHHHSCCCEEE
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHh-----hhccCcCCCCHHHHHHHHHHHHHhcCCCCEEE
Confidence 45678999999 9999999999999999999999998665432 2445789998653 22 24689999
Q ss_pred EEEEecCCCCCCCCh----hhhHHH------HHHHHh----hcCCccEEEEEccceeecCCCCccccCCCCCCCCChhHH
Q 017914 126 HLLVSIPPLEGTGDP----MLKHGE------LLRSTL----MNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANPTTELGR 191 (364)
Q Consensus 126 ~~~~~~~~~~~~~~~----~~~~~~------~l~~a~----~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~~ 191 (364)
|+++........... ...... ++..++ ++.+..++|++||...+.. ..+...|+.
T Consensus 100 nnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~-----------~~~~~~Y~a 168 (266)
T 3uxy_A 100 NNAGVISRGRITETTDADWSLSLGVNVEAPFRICRAAIPLMAAAGGGAIVNVASCWGLRP-----------GPGHALYCL 168 (266)
T ss_dssp ECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTBC-----------CTTBHHHHH
T ss_pred ECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHhCCC-----------CCCChHHHH
Confidence 999865432211111 111112 233332 3455679999999765422 123468999
Q ss_pred HHHHHHHHHHHhhhhc---CCcEEEEEecceecCCCChHHHHHHhcCcccc---cccccCCcccccccHHHHHHHHHHHc
Q 017914 192 LRLSAEKGWLNLGRDL---GISAQVFRLGGIYGPGRSSVDTIIKQLPLSEG---QKMRRARQYTSRIHVDDICQVLSASI 265 (364)
Q Consensus 192 sK~~~E~~~~~~~~~~---~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~i~v~Dva~~~~~~l 265 (364)
+|.+.+.+.+.++.+. |+++++++||.+.++.. ............ ...........+.+++|+|++++.++
T Consensus 169 sKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~---~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~ 245 (266)
T 3uxy_A 169 TKAALASLTQCMGMDHAPQGIRINAVCPNEVNTPML---RTGFAKRGFDPDRAVAELGRTVPLGRIAEPEDIADVVLFLA 245 (266)
T ss_dssp HHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCHHH---HHHHHHTTCCHHHHHHHHHTTSTTSSCBCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhhcCcEEEEEeeCCCcchHh---hhhhhcccccchHHHHHHHhcCCCCCCcCHHHHHHHHHHHh
Confidence 9999999999887553 89999999999976531 111111000000 00111122345688999999999999
Q ss_pred cCCC---CCceEEEeCCCCCC
Q 017914 266 DKPS---AWNVYNVVDDDPAP 283 (364)
Q Consensus 266 ~~~~---~g~~~~i~~~~~~s 283 (364)
.... .|+++++.+|..++
T Consensus 246 s~~~~~itG~~i~vdGG~~~s 266 (266)
T 3uxy_A 246 SDAARYLCGSLVEVNGGKAVA 266 (266)
T ss_dssp SGGGTTCCSCEEEESTTCCCC
T ss_pred CchhcCCcCCEEEECcCEeCC
Confidence 7652 38999999886553
|
| >1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.78 E-value=7.1e-18 Score=148.50 Aligned_cols=198 Identities=12% Similarity=0.051 Sum_probs=130.1
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhh----h----CCceEEEccCChhhH--Hhh-------
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELE----Q----SGFDVHLFNANETAL--MIL------- 118 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~----~----~~~~~~~~D~~~~~~--~~~------- 118 (364)
..+++||||| +|+||++++++|+++|++|++++|+.++...+. . ..+.++.+|++|.+. ..+
T Consensus 30 l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 109 (279)
T 1xg5_A 30 WRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQH 109 (279)
T ss_dssp GTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHHHHhC
Confidence 4568999999 999999999999999999999999876654432 1 246788999999763 222
Q ss_pred ccCceeeEEEEecCCCCCCCChh----hhH----------HHHHHHHhhcCCc--cEEEEEccceeecCCCCccccCCCC
Q 017914 119 TTLKNYTHLLVSIPPLEGTGDPM----LKH----------GELLRSTLMNGHL--QWLGYLSSTGVYGHSGGAWVDEDYP 182 (364)
Q Consensus 119 ~~~d~v~~~~~~~~~~~~~~~~~----~~~----------~~~l~~a~~~~~~--~r~v~~Ss~~vy~~~~~~~~~E~~~ 182 (364)
..+|+|+|+++............ ... ..+++..+++.+. +++|++||...+... +
T Consensus 110 g~iD~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~---------~ 180 (279)
T 1xg5_A 110 SGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRVL---------P 180 (279)
T ss_dssp CCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSCC---------S
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCceEEEEcChhhcccC---------C
Confidence 36899999997644322111111 111 2344555555554 799999998755321 1
Q ss_pred CCCCChhHHHHHHHHHHHHHhhh-----hcCCcEEEEEecceecCCCChHHHHHHhcCcccccccccCCcccccccHHHH
Q 017914 183 ANPTTELGRLRLSAEKGWLNLGR-----DLGISAQVFRLGGIYGPGRSSVDTIIKQLPLSEGQKMRRARQYTSRIHVDDI 257 (364)
Q Consensus 183 ~~~~~~Y~~sK~~~E~~~~~~~~-----~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dv 257 (364)
..+...|+.+|...|.+++.++. ..++++++|+||.+.++.. ........ ...........+++++|+
T Consensus 181 ~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~---~~~~~~~~----~~~~~~~~~~~~~~~~dv 253 (279)
T 1xg5_A 181 LSVTHFYSATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQFA---FKLHDKDP----EKAAATYEQMKCLKPEDV 253 (279)
T ss_dssp CGGGHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSHH---HHHTTTCH----HHHHHHHC---CBCHHHH
T ss_pred CCCCchhHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEecCcccchhh---hhhcccCh----hHHhhhcccccCCCHHHH
Confidence 22346799999999998887764 3479999999999876531 11000000 000000011246889999
Q ss_pred HHHHHHHccCCCC
Q 017914 258 CQVLSASIDKPSA 270 (364)
Q Consensus 258 a~~~~~~l~~~~~ 270 (364)
|++++.++..+..
T Consensus 254 A~~i~~l~~~~~~ 266 (279)
T 1xg5_A 254 AEAVIYVLSTPAH 266 (279)
T ss_dssp HHHHHHHHHSCTT
T ss_pred HHHHHHHhcCCcc
Confidence 9999999987643
|
| >3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A* | Back alignment and structure |
|---|
Probab=99.78 E-value=5e-18 Score=150.24 Aligned_cols=210 Identities=10% Similarity=0.015 Sum_probs=139.3
Q ss_pred CCCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhh-hh----h--hCCceEEEccCChhhH--Hhh-------
Q 017914 56 WQSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKK-EL----E--QSGFDVHLFNANETAL--MIL------- 118 (364)
Q Consensus 56 ~~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~l----~--~~~~~~~~~D~~~~~~--~~~------- 118 (364)
...+++||||| +|+||++++++|+++|++|++++|+.+... .+ . ...+.++.+|++|.+. ..+
T Consensus 44 ~l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 123 (291)
T 3ijr_A 44 KLKGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSDEQHCKDIVQETVRQL 123 (291)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEESCTTSHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 35678999999 999999999999999999999999865322 11 1 1367889999999763 222
Q ss_pred ccCceeeEEEEecCCCCCCC-----ChhhhHHH------HHHHHhhcC--CccEEEEEccceeecCCCCccccCCCCCCC
Q 017914 119 TTLKNYTHLLVSIPPLEGTG-----DPMLKHGE------LLRSTLMNG--HLQWLGYLSSTGVYGHSGGAWVDEDYPANP 185 (364)
Q Consensus 119 ~~~d~v~~~~~~~~~~~~~~-----~~~~~~~~------~l~~a~~~~--~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~ 185 (364)
..+|+++|+++......... +....... ++.+++... ...++|++||...+.... .
T Consensus 124 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~-----------~ 192 (291)
T 3ijr_A 124 GSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIINTASIVAYEGNE-----------T 192 (291)
T ss_dssp SSCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEEEECCTHHHHCCT-----------T
T ss_pred CCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEEEEechHhcCCCC-----------C
Confidence 36899999987654322111 11112222 333333321 235899999987664322 3
Q ss_pred CChhHHHHHHHHHHHHHhhhhc---CCcEEEEEecceecCCCChHHHHHHhcCcccccccccCCcccccccHHHHHHHHH
Q 017914 186 TTELGRLRLSAEKGWLNLGRDL---GISAQVFRLGGIYGPGRSSVDTIIKQLPLSEGQKMRRARQYTSRIHVDDICQVLS 262 (364)
Q Consensus 186 ~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~ 262 (364)
...|+.+|...+.+.+.++.+. |+++++|+||.+.++.. ......... ...........+.+++|+|++++
T Consensus 193 ~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~---~~~~~~~~~---~~~~~~~p~~r~~~p~dvA~~v~ 266 (291)
T 3ijr_A 193 LIDYSATKGAIVAFTRSLSQSLVQKGIRVNGVAPGPIWTPLI---PSSFDEKKV---SQFGSNVPMQRPGQPYELAPAYV 266 (291)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTHH---HHHSCHHHH---HHTTTTSTTSSCBCGGGTHHHHH
T ss_pred ChhHHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeCCCcCCcc---cccCCHHHH---HHHHccCCCCCCcCHHHHHHHHH
Confidence 3679999999999999887654 89999999999987631 110000000 00111122344678999999999
Q ss_pred HHccCC---CCCceEEEeCCCCC
Q 017914 263 ASIDKP---SAWNVYNVVDDDPA 282 (364)
Q Consensus 263 ~~l~~~---~~g~~~~i~~~~~~ 282 (364)
.++... -.|+++++.+|..+
T Consensus 267 ~L~s~~~~~itG~~i~vdGG~~~ 289 (291)
T 3ijr_A 267 YLASSDSSYVTGQMIHVNGGVIV 289 (291)
T ss_dssp HHHSGGGTTCCSCEEEESSSCCC
T ss_pred HHhCCccCCCcCCEEEECCCccc
Confidence 998764 34899999887543
|
| >3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis} | Back alignment and structure |
|---|
Probab=99.78 E-value=2.5e-18 Score=151.40 Aligned_cols=207 Identities=8% Similarity=-0.115 Sum_probs=138.7
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhh------hCCceEEEccCChhhH--Hhh-------cc
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELE------QSGFDVHLFNANETAL--MIL-------TT 120 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~------~~~~~~~~~D~~~~~~--~~~-------~~ 120 (364)
..+++||||| +|+||++++++|+++|++|++++|+.+....+. ..++.++.+|++|.+. ..+ ..
T Consensus 32 l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~ 111 (279)
T 3ctm_A 32 LKGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTYGVHSKAYKCNISDPKSVEETISQQEKDFGT 111 (279)
T ss_dssp CTTCEEEETTTTSSHHHHHHHHHHHHTCEEEEEESSSCCHHHHHHHHHHHCSCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeecCCHHHHHHHHHHHHHHhCC
Confidence 4568999999 999999999999999999999999876543322 2357889999999763 333 24
Q ss_pred CceeeEEEEecCCCCCCC-C-hhh----hH----------HHHHHHHhhcCCccEEEEEccceeecCCCCccccCCCCCC
Q 017914 121 LKNYTHLLVSIPPLEGTG-D-PML----KH----------GELLRSTLMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPAN 184 (364)
Q Consensus 121 ~d~v~~~~~~~~~~~~~~-~-~~~----~~----------~~~l~~a~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~ 184 (364)
+|+|+|+++......... + ... .. ..+++..+++.+.++||++||...+... +..
T Consensus 112 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~---------~~~ 182 (279)
T 3ctm_A 112 IDVFVANAGVTWTQGPEIDVDNYDSWNKIISVDLNGVYYCSHNIGKIFKKNGKGSLIITSSISGKIVN---------IPQ 182 (279)
T ss_dssp CSEEEECGGGSTTC--CCCSSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCCTTSCC------------C
T ss_pred CCEEEECCcccccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEECchHhccCC---------CCC
Confidence 899999997654311111 1 111 11 2344455555667899999997643210 122
Q ss_pred CCChhHHHHHHHHHHHHHhhhh---cCCcEEEEEecceecCCCChH-HHHHHhcCcccccccccCCcccccccHHHHHHH
Q 017914 185 PTTELGRLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRSSV-DTIIKQLPLSEGQKMRRARQYTSRIHVDDICQV 260 (364)
Q Consensus 185 ~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~ 260 (364)
+...|+.+|...|.+++.++.+ .+ ++++++||.+.++..... ...... +... .....+++++|+|++
T Consensus 183 ~~~~Y~~sK~a~~~~~~~la~e~~~~~-~v~~v~Pg~v~t~~~~~~~~~~~~~--~~~~------~p~~~~~~~~dvA~~ 253 (279)
T 3ctm_A 183 LQAPYNTAKAACTHLAKSLAIEWAPFA-RVNTISPGYIDTDITDFASKDMKAK--WWQL------TPLGREGLTQELVGG 253 (279)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHTTTTC-EEEEEEECSBSSTTTSSCCHHHHHH--HHHH------STTCSCBCGGGTHHH
T ss_pred CcccHHHHHHHHHHHHHHHHHHhcccC-CEEEEeccCCccccccccChHHHHH--HHHh------CCccCCcCHHHHHHH
Confidence 4468999999999999988765 36 899999999987643211 111110 0000 011235889999999
Q ss_pred HHHHccCC---CCCceEEEeCCCC
Q 017914 261 LSASIDKP---SAWNVYNVVDDDP 281 (364)
Q Consensus 261 ~~~~l~~~---~~g~~~~i~~~~~ 281 (364)
++.++... ..|+++++.+|..
T Consensus 254 ~~~l~s~~~~~~tG~~i~vdgG~~ 277 (279)
T 3ctm_A 254 YLYLASNASTFTTGSDVVIDGGYT 277 (279)
T ss_dssp HHHHHSGGGTTCCSCEEEESTTCC
T ss_pred HHHHhCccccCccCCEEEECCCee
Confidence 99999764 3489999988753
|
| >4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=99.78 E-value=6e-18 Score=147.81 Aligned_cols=207 Identities=10% Similarity=-0.049 Sum_probs=138.1
Q ss_pred CCCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhh-------hCCceEEEccCChhhH--Hhh-------
Q 017914 56 WQSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELE-------QSGFDVHLFNANETAL--MIL------- 118 (364)
Q Consensus 56 ~~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~-------~~~~~~~~~D~~~~~~--~~~------- 118 (364)
...+++||||| +|+||+++++.|+++|++|++++|+.++...+. ..++.++.+|++|.+. ..+
T Consensus 17 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 96 (266)
T 4egf_A 17 RLDGKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFGTDVHTVAIDLAEPDAPAELARRAAEAF 96 (266)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSTTHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHc
Confidence 45678999999 999999999999999999999999876654321 2467899999999763 222
Q ss_pred ccCceeeEEEEecCCCCCCCCh----hhhHHHHH------HHHh----hcCC-ccEEEEEccceeecCCCCccccCCCCC
Q 017914 119 TTLKNYTHLLVSIPPLEGTGDP----MLKHGELL------RSTL----MNGH-LQWLGYLSSTGVYGHSGGAWVDEDYPA 183 (364)
Q Consensus 119 ~~~d~v~~~~~~~~~~~~~~~~----~~~~~~~l------~~a~----~~~~-~~r~v~~Ss~~vy~~~~~~~~~E~~~~ 183 (364)
..+|+++|+++........... ......|+ ..++ .+.+ ..++|++||...+.. .
T Consensus 97 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~-----------~ 165 (266)
T 4egf_A 97 GGLDVLVNNAGISHPQPVVDTDPQLFDATIAVNLRAPALLASAVGKAMVAAGEGGAIITVASAAALAP-----------L 165 (266)
T ss_dssp TSCSEEEEECCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSC-----------C
T ss_pred CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEEcchhhccC-----------C
Confidence 3789999999865432211111 11122222 2222 2222 458999999765522 2
Q ss_pred CCCChhHHHHHHHHHHHHHhhhh---cCCcEEEEEecceecCCCChH---HHHHHhcCcccccccccCCcccccccHHHH
Q 017914 184 NPTTELGRLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRSSV---DTIIKQLPLSEGQKMRRARQYTSRIHVDDI 257 (364)
Q Consensus 184 ~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dv 257 (364)
.....|+.+|...+.+.+.++.+ .|++++.|+||.+..+..... ...... + ........+.+++|+
T Consensus 166 ~~~~~Y~asK~a~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~--~------~~~~p~~r~~~p~dv 237 (266)
T 4egf_A 166 PDHYAYCTSKAGLVMATKVLARELGPHGIRANSVCPTVVLTEMGQRVWGDEAKSAP--M------IARIPLGRFAVPHEV 237 (266)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBCSHHHHHHTCSHHHHHH--H------HTTCTTSSCBCHHHH
T ss_pred CCChHHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCchhhhhccChHHHHH--H------HhcCCCCCCcCHHHH
Confidence 23468999999999999888755 489999999999976531100 000000 0 000112235779999
Q ss_pred HHHHHHHccCC---CCCceEEEeCCCC
Q 017914 258 CQVLSASIDKP---SAWNVYNVVDDDP 281 (364)
Q Consensus 258 a~~~~~~l~~~---~~g~~~~i~~~~~ 281 (364)
|++++.++... -.|+++++.+|..
T Consensus 238 a~~v~~L~s~~~~~itG~~i~vdGG~~ 264 (266)
T 4egf_A 238 SDAVVWLASDAASMINGVDIPVDGGYT 264 (266)
T ss_dssp HHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred HHHHHHHhCchhcCccCcEEEECCCcc
Confidence 99999998754 3489999988753
|
| >4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A | Back alignment and structure |
|---|
Probab=99.78 E-value=5.2e-18 Score=147.21 Aligned_cols=211 Identities=9% Similarity=-0.057 Sum_probs=141.3
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhh---CCceEEEccCChhhH--Hh-------hccCce
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQ---SGFDVHLFNANETAL--MI-------LTTLKN 123 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~---~~~~~~~~D~~~~~~--~~-------~~~~d~ 123 (364)
..++++|||| +|+||++++++|+++|++|++++|+.+....+.+ .++.++.+|++|.+. .. +..+|+
T Consensus 6 l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~ 85 (255)
T 4eso_A 6 YQGKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREEFGPRVHALRSDIADLNEIAVLGAAAGQTLGAIDL 85 (255)
T ss_dssp TTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHSSEEE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHHhCCCCE
Confidence 4568999999 9999999999999999999999998876655432 467899999999763 21 236899
Q ss_pred eeEEEEecCCCCCC----CChhhhHHHH------HHHHhhc--CCccEEEEEccceeecCCCCccccCCCCCCCCChhHH
Q 017914 124 YTHLLVSIPPLEGT----GDPMLKHGEL------LRSTLMN--GHLQWLGYLSSTGVYGHSGGAWVDEDYPANPTTELGR 191 (364)
Q Consensus 124 v~~~~~~~~~~~~~----~~~~~~~~~~------l~~a~~~--~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~~ 191 (364)
++|+++........ .+.......| +..++.. ....++|++||...+... .+...|+.
T Consensus 86 lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~~~~Y~a 154 (255)
T 4eso_A 86 LHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREGGSIVFTSSVADEGGH-----------PGMSVYSA 154 (255)
T ss_dssp EEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCGGGSSBC-----------TTBHHHHH
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCEEEEECChhhcCCC-----------CCchHHHH
Confidence 99988764422111 1111122223 2333321 113589999997654322 13468999
Q ss_pred HHHHHHHHHHHhhhh---cCCcEEEEEecceecCCCCh-------HHHHHHhcCcccccccccCCcccccccHHHHHHHH
Q 017914 192 LRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRSS-------VDTIIKQLPLSEGQKMRRARQYTSRIHVDDICQVL 261 (364)
Q Consensus 192 sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~ 261 (364)
+|...+.+.+.++.+ .|++++.++||.+..+.... ...+... ... ......+.+++|+|+++
T Consensus 155 sKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~--~~~------~~p~~r~~~pedvA~~v 226 (255)
T 4eso_A 155 SKAALVSFASVLAAELLPRGIRVNSVSPGFIDTPTKGVAGITEAERAEFKTL--GDN------ITPMKRNGTADEVARAV 226 (255)
T ss_dssp HHHHHHHHHHHHHHHTGGGTCEEEEEEECSBCCSSTTCTTSCHHHHHHHHHH--HHH------HSTTSSCBCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhhCcEEEEEecCcccCcccccccCChhhHHHHHHH--Hhc------cCCCCCCcCHHHHHHHH
Confidence 999999999888755 38999999999998874221 0111110 000 00112346799999999
Q ss_pred HHHccCC--CCCceEEEeCCCCCCHHH
Q 017914 262 SASIDKP--SAWNVYNVVDDDPAPREE 286 (364)
Q Consensus 262 ~~~l~~~--~~g~~~~i~~~~~~s~~e 286 (364)
+.++... -.|+++++.+|...++.+
T Consensus 227 ~~L~s~~~~itG~~i~vdGG~~~~l~~ 253 (255)
T 4eso_A 227 LFLAFEATFTTGAKLAVDGGLGQKLST 253 (255)
T ss_dssp HHHHHTCTTCCSCEEEESTTTTTTBCC
T ss_pred HHHcCcCcCccCCEEEECCCccccCcC
Confidence 9888652 248999999987766544
|
| >2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A* | Back alignment and structure |
|---|
Probab=99.78 E-value=1.7e-18 Score=150.97 Aligned_cols=209 Identities=12% Similarity=0.063 Sum_probs=136.7
Q ss_pred CCCCeEEEEc-C--ChhhHHHHHHHHhCCCEEEEEEeCch---hhhhhhh--CCceEEEccCChhhH--Hhh-------c
Q 017914 57 QSPNRMLILG-M--GFVGRIFAEKIKNQGWVVSGTCTNVM---KKKELEQ--SGFDVHLFNANETAL--MIL-------T 119 (364)
Q Consensus 57 ~~~~~vlVtG-t--G~iG~~l~~~L~~~g~~V~~~~r~~~---~~~~l~~--~~~~~~~~D~~~~~~--~~~-------~ 119 (364)
..+++||||| + |+||++++++|+++|++|++++|+.+ ....+.. .++.++.+|++|.+. ..+ .
T Consensus 6 l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 85 (261)
T 2wyu_A 6 LSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALGGALLFRADVTQDEELDALFAGVKEAFG 85 (261)
T ss_dssp CTTCEEEEESCCSSSSHHHHHHHHHHHHTCEEEEEESCGGGHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCcEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 4468999998 8 99999999999999999999999864 2222221 347889999999763 222 2
Q ss_pred cCceeeEEEEecCC---CCCC-----CChhhhHHH------HHHHHhhcC--CccEEEEEccceeecCCCCccccCCCCC
Q 017914 120 TLKNYTHLLVSIPP---LEGT-----GDPMLKHGE------LLRSTLMNG--HLQWLGYLSSTGVYGHSGGAWVDEDYPA 183 (364)
Q Consensus 120 ~~d~v~~~~~~~~~---~~~~-----~~~~~~~~~------~l~~a~~~~--~~~r~v~~Ss~~vy~~~~~~~~~E~~~~ 183 (364)
.+|+++|+++.... .... .+....... ++.+++... ...++|++||...+.. .
T Consensus 86 ~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~-----------~ 154 (261)
T 2wyu_A 86 GLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREGGGIVTLTYYASEKV-----------V 154 (261)
T ss_dssp SEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEECGGGTSB-----------C
T ss_pred CCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHhccCCEEEEEecccccCC-----------C
Confidence 68999999975432 0111 111111222 333343322 1258999999654421 1
Q ss_pred CCCChhHHHHHHHHHHHHHhhhhc---CCcEEEEEecceecCCCCh---HHHHHHhcCcccccccccCCcccccccHHHH
Q 017914 184 NPTTELGRLRLSAEKGWLNLGRDL---GISAQVFRLGGIYGPGRSS---VDTIIKQLPLSEGQKMRRARQYTSRIHVDDI 257 (364)
Q Consensus 184 ~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilRp~~v~g~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dv 257 (364)
.+...|+.+|...+.+.+.++.+. |+++++++||.++++.... ....... +.... ....+.+++|+
T Consensus 155 ~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~--~~~~~------p~~~~~~~~dv 226 (261)
T 2wyu_A 155 PKYNVMAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAARSIPGFTKMYDR--VAQTA------PLRRNITQEEV 226 (261)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCTGGGGCTTHHHHHHH--HHHHS------TTSSCCCHHHH
T ss_pred CCchHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEeeCCCcCchhhhccccHHHHHH--HHhcC------CCCCCCCHHHH
Confidence 134579999999999999887554 8999999999998874221 1111111 00000 11234789999
Q ss_pred HHHHHHHccCC---CCCceEEEeCCCCCCH
Q 017914 258 CQVLSASIDKP---SAWNVYNVVDDDPAPR 284 (364)
Q Consensus 258 a~~~~~~l~~~---~~g~~~~i~~~~~~s~ 284 (364)
|++++.++... -.|++|++.+|..++.
T Consensus 227 a~~v~~l~s~~~~~~tG~~~~vdgG~~~~~ 256 (261)
T 2wyu_A 227 GNLGLFLLSPLASGITGEVVYVDAGYHIMG 256 (261)
T ss_dssp HHHHHHHHSGGGTTCCSCEEEESTTGGGBC
T ss_pred HHHHHHHcChhhcCCCCCEEEECCCccccC
Confidence 99999998653 2489999988865443
|
| >1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A | Back alignment and structure |
|---|
Probab=99.78 E-value=5.3e-18 Score=146.54 Aligned_cols=202 Identities=10% Similarity=-0.026 Sum_probs=131.7
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCChhhH--Hhh-------ccCceeeE
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETAL--MIL-------TTLKNYTH 126 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~--~~~-------~~~d~v~~ 126 (364)
..+++||||| +|+||++++++|+++|++|++++|+.++...+ ..+.+|++|.+. ..+ ..+|+++|
T Consensus 13 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~-----~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~ 87 (247)
T 1uzm_A 13 FVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKGL-----FGVEVDVTDSDAVDRAFTAVEEHQGPVEVLVS 87 (247)
T ss_dssp CCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCTTS-----EEEECCTTCHHHHHHHHHHHHHHHSSCSEEEE
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHh-----cCeeccCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 4568999999 99999999999999999999999987654432 247899999763 222 36799999
Q ss_pred EEEecCCCC--CCC--ChhhhHHH------HHHHH----hhcCCccEEEEEccceeecCCCCccccCCCCCCCCChhHHH
Q 017914 127 LLVSIPPLE--GTG--DPMLKHGE------LLRST----LMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANPTTELGRL 192 (364)
Q Consensus 127 ~~~~~~~~~--~~~--~~~~~~~~------~l~~a----~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~~s 192 (364)
+++...... ... +....... ++..+ +++.+.+++|++||...+... .....|+.+
T Consensus 88 ~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~~~~Y~~s 156 (247)
T 1uzm_A 88 NAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLWGI-----------GNQANYAAS 156 (247)
T ss_dssp ECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC----------------CCHHHHHH
T ss_pred CCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEECCHhhccCC-----------CCChhHHHH
Confidence 997643211 111 11111112 22222 234567899999997543211 134689999
Q ss_pred HHHHHHHHHHhhhh---cCCcEEEEEecceecCCCChH-HHHHHhcCcccccccccCCcccccccHHHHHHHHHHHccCC
Q 017914 193 RLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRSSV-DTIIKQLPLSEGQKMRRARQYTSRIHVDDICQVLSASIDKP 268 (364)
Q Consensus 193 K~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~ 268 (364)
|...+.+.+.++.+ .|+++++++||.+.++....+ ...... +... .....+.+++|+|++++.++...
T Consensus 157 K~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~--~~~~------~p~~~~~~~~dvA~~~~~l~s~~ 228 (247)
T 1uzm_A 157 KAGVIGMARSIARELSKANVTANVVAPGYIDTDMTRALDERIQQG--ALQF------IPAKRVGTPAEVAGVVSFLASED 228 (247)
T ss_dssp HHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHSCHHHHHH--HGGG------CTTCSCBCHHHHHHHHHHHHSGG
T ss_pred HHHHHHHHHHHHHHhhhcCcEEEEEEeCCCcccchhhcCHHHHHH--HHhc------CCCCCCcCHHHHHHHHHHHcCcc
Confidence 99999999887654 489999999999865421100 001010 0000 01123689999999999998753
Q ss_pred ---CCCceEEEeCCCCC
Q 017914 269 ---SAWNVYNVVDDDPA 282 (364)
Q Consensus 269 ---~~g~~~~i~~~~~~ 282 (364)
-.|+.+++.+|..+
T Consensus 229 ~~~~~G~~i~vdgG~~~ 245 (247)
T 1uzm_A 229 ASYISGAVIPVDGGMGM 245 (247)
T ss_dssp GTTCCSCEEEESTTTTC
T ss_pred ccCCcCCEEEECCCccc
Confidence 34899999887543
|
| >4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A | Back alignment and structure |
|---|
Probab=99.78 E-value=7.4e-18 Score=147.70 Aligned_cols=207 Identities=11% Similarity=-0.023 Sum_probs=136.7
Q ss_pred CCCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchh-hhhh----hh--CCceEEEccCChhhH--Hhh-------
Q 017914 56 WQSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMK-KKEL----EQ--SGFDVHLFNANETAL--MIL------- 118 (364)
Q Consensus 56 ~~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~-~~~l----~~--~~~~~~~~D~~~~~~--~~~------- 118 (364)
...+++||||| +|+||++++++|+++|++|++++|+... .+.+ .. .++.++.+|++|.+. ..+
T Consensus 26 ~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 105 (271)
T 4iin_A 26 QFTGKNVLITGASKGIGAEIAKTLASMGLKVWINYRSNAEVADALKNELEEKGYKAAVIKFDAASESDFIEAIQTIVQSD 105 (271)
T ss_dssp CCSCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred ccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhc
Confidence 34568999999 9999999999999999999999995433 2222 11 367899999999663 222
Q ss_pred ccCceeeEEEEecCCCCCCC----ChhhhHHHHH----------HHHhhcCCccEEEEEccceeecCCCCccccCCCCCC
Q 017914 119 TTLKNYTHLLVSIPPLEGTG----DPMLKHGELL----------RSTLMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPAN 184 (364)
Q Consensus 119 ~~~d~v~~~~~~~~~~~~~~----~~~~~~~~~l----------~~a~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~ 184 (364)
..+|+++|+++......... +.......|+ +..++..+..++|++||...+... .
T Consensus 106 g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~ 174 (271)
T 4iin_A 106 GGLSYLVNNAGVVRDKLAIKMKTEDFHHVIDNNLTSAFIGCREALKVMSKSRFGSVVNVASIIGERGN-----------M 174 (271)
T ss_dssp SSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCC-----------T
T ss_pred CCCCEEEECCCcCCCcccccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEechhhcCCC-----------C
Confidence 37899999998655422111 1111122222 222234456799999987654321 2
Q ss_pred CCChhHHHHHHHHHHHHHhhhh---cCCcEEEEEecceecCCCChHHHHHHhcCcccccccccCCcccccccHHHHHHHH
Q 017914 185 PTTELGRLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRSSVDTIIKQLPLSEGQKMRRARQYTSRIHVDDICQVL 261 (364)
Q Consensus 185 ~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~ 261 (364)
+...|+.+|.+.+.+++.++.+ .++++++++||.+..+....+..-... ..........+.+++|+|+++
T Consensus 175 ~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~-------~~~~~~~~~~~~~p~dvA~~i 247 (271)
T 4iin_A 175 GQTNYSASKGGMIAMSKSFAYEGALRNIRFNSVTPGFIETDMNANLKDELKA-------DYVKNIPLNRLGSAKEVAEAV 247 (271)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCCC-------------------CGGGCTTCSCBCHHHHHHHH
T ss_pred CchHhHHHHHHHHHHHHHHHHHHHHhCcEEEEEEeCcccCCchhhhcHHHHH-------HHHhcCCcCCCcCHHHHHHHH
Confidence 3468999999999999988765 589999999999977642221110000 011111223468899999999
Q ss_pred HHHccCC---CCCceEEEeCCC
Q 017914 262 SASIDKP---SAWNVYNVVDDD 280 (364)
Q Consensus 262 ~~~l~~~---~~g~~~~i~~~~ 280 (364)
+.++... -.|+++++.+|.
T Consensus 248 ~~l~s~~~~~itG~~i~vdGG~ 269 (271)
T 4iin_A 248 AFLLSDHSSYITGETLKVNGGL 269 (271)
T ss_dssp HHHHSGGGTTCCSCEEEESTTS
T ss_pred HHHhCCCcCCCcCCEEEeCCCe
Confidence 9999764 348999998874
|
| >3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile} | Back alignment and structure |
|---|
Probab=99.78 E-value=9.5e-18 Score=150.26 Aligned_cols=216 Identities=10% Similarity=-0.006 Sum_probs=136.6
Q ss_pred ccCCCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCc------------hhhhh----hh--hCCceEEEccCChhh
Q 017914 54 SEWQSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNV------------MKKKE----LE--QSGFDVHLFNANETA 114 (364)
Q Consensus 54 ~~~~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~------------~~~~~----l~--~~~~~~~~~D~~~~~ 114 (364)
+....+++||||| +|+||+++++.|+++|++|++++|+. +.... +. ...+.++.+|++|.+
T Consensus 41 m~~l~gk~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~ 120 (317)
T 3oec_A 41 MNRLQGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRRIIARQADVRDLA 120 (317)
T ss_dssp -CTTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHH
T ss_pred hhccCCCEEEEeCCCcHHHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHH
Confidence 3345678999999 99999999999999999999998862 22211 11 135788999999976
Q ss_pred H--Hhh-------ccCceeeEEEEecCCCCCCC----ChhhhHHHHH------HHHh----hcCC-ccEEEEEccceeec
Q 017914 115 L--MIL-------TTLKNYTHLLVSIPPLEGTG----DPMLKHGELL------RSTL----MNGH-LQWLGYLSSTGVYG 170 (364)
Q Consensus 115 ~--~~~-------~~~d~v~~~~~~~~~~~~~~----~~~~~~~~~l------~~a~----~~~~-~~r~v~~Ss~~vy~ 170 (364)
. ..+ ..+|+++|+++......... +.......|+ ..++ .+.+ ..+||++||...+.
T Consensus 121 ~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~g~Iv~isS~~~~~ 200 (317)
T 3oec_A 121 SLQAVVDEALAEFGHIDILVSNVGISNQGEVVSLTDQQWSDILQTNLIGAWHACRAVLPSMIERGQGGSVIFVSSTVGLR 200 (317)
T ss_dssp HHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTCSCEEEEEECCGGGSS
T ss_pred HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCCEEEEECcHHhcC
Confidence 3 222 36899999998654322111 1111122232 2222 2322 46899999976542
Q ss_pred CCCCccccCCCCCCCCChhHHHHHHHHHHHHHhhhh---cCCcEEEEEecceecCCCCh---HHHHHHhcCcccc----c
Q 017914 171 HSGGAWVDEDYPANPTTELGRLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRSS---VDTIIKQLPLSEG----Q 240 (364)
Q Consensus 171 ~~~~~~~~E~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~---~~~~~~~~~~~~~----~ 240 (364)
.. .....|+.+|...+.+.+.++.+ .|+++++|+||.+.++.... ...+......... .
T Consensus 201 ~~-----------~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (317)
T 3oec_A 201 GA-----------PGQSHYAASKHGVQGLMLSLANEVGRHNIRVNSVNPGAVNTEMALNEKLLKMFLPHLENPTREDAAE 269 (317)
T ss_dssp CC-----------TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHCHHHHHHHCTTCSSCCHHHHHH
T ss_pred CC-----------CCCcchHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCccccchhhhhhhhhhccccchhHHHH
Confidence 22 13468999999999999988765 48999999999998753110 0011000000000 0
Q ss_pred cc-ccCCcccccccHHHHHHHHHHHccCC---CCCceEEEeCCC
Q 017914 241 KM-RRARQYTSRIHVDDICQVLSASIDKP---SAWNVYNVVDDD 280 (364)
Q Consensus 241 ~~-~~~~~~~~~i~v~Dva~~~~~~l~~~---~~g~~~~i~~~~ 280 (364)
.. ........|++++|+|++++.++... -.|+++++.+|.
T Consensus 270 ~~~~~~~~p~~~~~pedvA~av~fL~s~~a~~itG~~i~vdGG~ 313 (317)
T 3oec_A 270 LFSQLTLLPIPWVEPEDVSNAVAWLASDEARYIHGAAIPVDGGQ 313 (317)
T ss_dssp HHTTTCSSSSSSBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTG
T ss_pred HHhhhccCCCCCCCHHHHHHHHHHHcCCcccCCCCCEEEECcch
Confidence 00 00111256789999999999998754 248999998874
|
| >3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.78 E-value=5.8e-18 Score=148.86 Aligned_cols=210 Identities=12% Similarity=-0.012 Sum_probs=142.0
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhh------hCCceEEEccCChhhH--Hhh-------cc
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELE------QSGFDVHLFNANETAL--MIL-------TT 120 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~------~~~~~~~~~D~~~~~~--~~~-------~~ 120 (364)
..+++||||| +|+||++++++|+++|++|++++|+.+....+. ...+.++.+|++|.+. ..+ ..
T Consensus 6 l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 85 (280)
T 3tox_A 6 LEGKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGGGGEAAALAGDVGDEALHEALVELAVRRFGG 85 (280)
T ss_dssp TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHTTTTCCEEECCCCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 4568999999 999999999999999999999999877654432 1357788899999764 222 36
Q ss_pred CceeeEEEEecCCCCCCC-----ChhhhHHHHHH------H----HhhcCCccEEEEEccceeecCCCCccccCCCCCCC
Q 017914 121 LKNYTHLLVSIPPLEGTG-----DPMLKHGELLR------S----TLMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANP 185 (364)
Q Consensus 121 ~d~v~~~~~~~~~~~~~~-----~~~~~~~~~l~------~----a~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~ 185 (364)
+|+++|+++......... +.......|+. . .+.+.+..++|++||...+.. +..+
T Consensus 86 iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~----------~~~~ 155 (280)
T 3tox_A 86 LDTAFNNAGALGAMGEISSLSVEGWRETLDTNLTSAFLAAKYQVPAIAALGGGSLTFTSSFVGHTA----------GFAG 155 (280)
T ss_dssp CCEEEECCCCCCSCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCSBTTTB----------CCTT
T ss_pred CCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhCcC----------CCCC
Confidence 899999998653322111 11112222222 2 223445679999999765411 1123
Q ss_pred CChhHHHHHHHHHHHHHhhhhc---CCcEEEEEecceecCCCCh-H----HHHHHhcCcccccccccCCcccccccHHHH
Q 017914 186 TTELGRLRLSAEKGWLNLGRDL---GISAQVFRLGGIYGPGRSS-V----DTIIKQLPLSEGQKMRRARQYTSRIHVDDI 257 (364)
Q Consensus 186 ~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilRp~~v~g~~~~~-~----~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dv 257 (364)
...|+.+|.+.+.+.+.++.+. |+++++|+||.+.++.... + ...... .........+.+++|+
T Consensus 156 ~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~--------~~~~~p~~r~~~pedv 227 (280)
T 3tox_A 156 VAPYAASKAGLIGLVQALAVELGARGIRVNALLPGGTDTPANFANLPGAAPETRGF--------VEGLHALKRIARPEEI 227 (280)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBSSTTSGGGSTTCCTHHHHH--------HHTTSTTSSCBCHHHH
T ss_pred chhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEECCCCCchhhhhccccCHHHHHH--------HhccCccCCCcCHHHH
Confidence 4689999999999999887653 8999999999998864221 0 011000 0001112345789999
Q ss_pred HHHHHHHccCC---CCCceEEEeCCCCCCH
Q 017914 258 CQVLSASIDKP---SAWNVYNVVDDDPAPR 284 (364)
Q Consensus 258 a~~~~~~l~~~---~~g~~~~i~~~~~~s~ 284 (364)
|++++.++... -.|+++++.+|..++.
T Consensus 228 A~~v~~L~s~~a~~itG~~i~vdGG~~~~~ 257 (280)
T 3tox_A 228 AEAALYLASDGASFVTGAALLADGGASVTK 257 (280)
T ss_dssp HHHHHHHHSGGGTTCCSCEEEESTTGGGCC
T ss_pred HHHHHHHhCccccCCcCcEEEECCCccccc
Confidence 99999999764 2489999998865544
|
| >3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber} | Back alignment and structure |
|---|
Probab=99.78 E-value=9.2e-18 Score=147.67 Aligned_cols=211 Identities=9% Similarity=0.019 Sum_probs=136.8
Q ss_pred CCCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhh------hCCceEEEccCChhhH--Hhh-------c
Q 017914 56 WQSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELE------QSGFDVHLFNANETAL--MIL-------T 119 (364)
Q Consensus 56 ~~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~------~~~~~~~~~D~~~~~~--~~~-------~ 119 (364)
+..+++||||| +|+||++++++|+++|++|++++|+.++...+. ...+.++.+|++|.+. ..+ .
T Consensus 21 m~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 100 (279)
T 3sju_A 21 MSRPQTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAGHDVDGSSCDVTSTDEVHAAVAAAVERFG 100 (279)
T ss_dssp ----CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 34568999999 999999999999999999999999877654332 1467889999999763 222 3
Q ss_pred cCceeeEEEEecCCCCCCCChh----hhHHHH------HHHHh------hcCCccEEEEEccceeecCCCCccccCCCCC
Q 017914 120 TLKNYTHLLVSIPPLEGTGDPM----LKHGEL------LRSTL------MNGHLQWLGYLSSTGVYGHSGGAWVDEDYPA 183 (364)
Q Consensus 120 ~~d~v~~~~~~~~~~~~~~~~~----~~~~~~------l~~a~------~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~ 183 (364)
.+|+++|+++............ .....| +..++ +..+..++|++||...+.. .
T Consensus 101 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~g~iV~isS~~~~~~-----------~ 169 (279)
T 3sju_A 101 PIGILVNSAGRNGGGETADLDDALWADVLDTNLTGVFRVTREVLRAGGMREAGWGRIVNIASTGGKQG-----------V 169 (279)
T ss_dssp SCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSSHHHHTCEEEEEECCGGGTSC-----------C
T ss_pred CCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhchhhHhhcCCcEEEEECChhhccC-----------C
Confidence 6899999998654322111111 111122 22222 2345579999999765422 1
Q ss_pred CCCChhHHHHHHHHHHHHHhhhh---cCCcEEEEEecceecCCCChHHHHHHhcCccc-------ccccccCCccccccc
Q 017914 184 NPTTELGRLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRSSVDTIIKQLPLSE-------GQKMRRARQYTSRIH 253 (364)
Q Consensus 184 ~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~i~ 253 (364)
.....|+.+|...+.+.+.++.+ .|+++++|+||.+.++. ...+........ ...+........+.+
T Consensus 170 ~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~ 246 (279)
T 3sju_A 170 MYAAPYTASKHGVVGFTKSVGFELAKTGITVNAVCPGYVETPM---AERVREGYARHWGVTEQEVHERFNAKIPLGRYST 246 (279)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEESSBCSHH---HHHHHHSCCSSSCCCHHHHHHHHHTTCTTSSCBC
T ss_pred CCChhHHHHHHHHHHHHHHHHHHHHhhCcEEEEEeeCcccchH---HHHHHhhhhhcccCChHHHHHHHHhcCCCCCCCC
Confidence 23468999999999999888755 58999999999987642 111111000000 000011112234588
Q ss_pred HHHHHHHHHHHccCCC---CCceEEEeCCC
Q 017914 254 VDDICQVLSASIDKPS---AWNVYNVVDDD 280 (364)
Q Consensus 254 v~Dva~~~~~~l~~~~---~g~~~~i~~~~ 280 (364)
++|+|++++.++.... .|+++++.+|.
T Consensus 247 pedvA~~v~~L~s~~a~~itG~~i~vdGG~ 276 (279)
T 3sju_A 247 PEEVAGLVGYLVTDAAASITAQALNVCGGL 276 (279)
T ss_dssp HHHHHHHHHHHTSSGGGGCCSCEEEESTTC
T ss_pred HHHHHHHHHHHhCccccCcCCcEEEECCCc
Confidence 9999999999987653 48999998874
|
| >4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=99.78 E-value=4.3e-18 Score=149.30 Aligned_cols=205 Identities=12% Similarity=0.067 Sum_probs=130.5
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEE-EeCchhhhhhh----h--CCceEEEccCChhhH--Hhh-------c
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGT-CTNVMKKKELE----Q--SGFDVHLFNANETAL--MIL-------T 119 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~-~r~~~~~~~l~----~--~~~~~~~~D~~~~~~--~~~-------~ 119 (364)
..+++||||| +|+||++++++|+++|++|+++ .|+.+..+.+. . ..+.++.+|++|.+. ..+ .
T Consensus 24 ~~~k~vlITGas~gIG~a~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g 103 (272)
T 4e3z_A 24 SDTPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITESGGEAVAIPGDVGNAADIAAMFSAVDRQFG 103 (272)
T ss_dssp CCSCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhCC
Confidence 3457899999 9999999999999999999887 55554443322 1 357889999999663 222 3
Q ss_pred cCceeeEEEEecCCCCCCC-----ChhhhHHHHHHH------Hh----hc---CCccEEEEEccceeecCCCCccccCCC
Q 017914 120 TLKNYTHLLVSIPPLEGTG-----DPMLKHGELLRS------TL----MN---GHLQWLGYLSSTGVYGHSGGAWVDEDY 181 (364)
Q Consensus 120 ~~d~v~~~~~~~~~~~~~~-----~~~~~~~~~l~~------a~----~~---~~~~r~v~~Ss~~vy~~~~~~~~~E~~ 181 (364)
.+|+++|+++......... +.......|+.. ++ .. .+..++|++||...+....
T Consensus 104 ~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~-------- 175 (272)
T 4e3z_A 104 RLDGLVNNAGIVDYPQRVDEMSVERIERMLRVNVTGSILCAAEAVRRMSRLYSGQGGAIVNVSSMAAILGSA-------- 175 (272)
T ss_dssp CCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCTHHHHCCT--------
T ss_pred CCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhccCCCCEEEEEcchHhccCCC--------
Confidence 6899999998654322111 111122223222 22 11 2356899999976543221
Q ss_pred CCCCCChhHHHHHHHHHHHHHhhhhc---CCcEEEEEecceecCCCCh--HHHHHHhcCcccccccccCCcccccccHHH
Q 017914 182 PANPTTELGRLRLSAEKGWLNLGRDL---GISAQVFRLGGIYGPGRSS--VDTIIKQLPLSEGQKMRRARQYTSRIHVDD 256 (364)
Q Consensus 182 ~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilRp~~v~g~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D 256 (364)
.....|+.+|.+.|.+++.++.+. |+++++++||.+.++.... ....... .........+.+++|
T Consensus 176 --~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~--------~~~~~~~~~~~~~ed 245 (272)
T 4e3z_A 176 --TQYVDYAASKAAIDTFTIGLAREVAAEGIRVNAVRPGIIETDLHASGGLPDRARE--------MAPSVPMQRAGMPEE 245 (272)
T ss_dssp --TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC--------------------------CCTTSSCBCHHH
T ss_pred --CCcchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCCCcCCcccccCChHHHHH--------HhhcCCcCCCcCHHH
Confidence 123569999999999998887654 8999999999998764221 0000000 011111233577999
Q ss_pred HHHHHHHHccCC---CCCceEEEeCC
Q 017914 257 ICQVLSASIDKP---SAWNVYNVVDD 279 (364)
Q Consensus 257 va~~~~~~l~~~---~~g~~~~i~~~ 279 (364)
+|++++.++... -.|++|++.+|
T Consensus 246 vA~~i~~l~s~~~~~~tG~~i~vdgG 271 (272)
T 4e3z_A 246 VADAILYLLSPSASYVTGSILNVSGG 271 (272)
T ss_dssp HHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred HHHHHHHHhCCccccccCCEEeecCC
Confidence 999999999754 24899999876
|
| >3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum} | Back alignment and structure |
|---|
Probab=99.78 E-value=1.2e-17 Score=145.35 Aligned_cols=213 Identities=9% Similarity=-0.053 Sum_probs=135.4
Q ss_pred CCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchh--hhhhh------hCCceEEEccCChhhH--Hhh-------cc
Q 017914 59 PNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMK--KKELE------QSGFDVHLFNANETAL--MIL-------TT 120 (364)
Q Consensus 59 ~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~--~~~l~------~~~~~~~~~D~~~~~~--~~~-------~~ 120 (364)
+++||||| +|+||++++++|+++|++|++++|+.+. ...+. ..++.++.+|++|.+. ..+ ..
T Consensus 2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 81 (258)
T 3a28_C 2 SKVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAADQKAVFVGLDVTDKANFDSAIDEAAEKLGG 81 (258)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECGGGHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHTC
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 57899999 9999999999999999999999998765 33221 1357889999999763 222 37
Q ss_pred CceeeEEEEecCCCCCCC----ChhhhHHHH------HHHH----hhcCCc-cEEEEEccceeecCCCCccccCCCCCCC
Q 017914 121 LKNYTHLLVSIPPLEGTG----DPMLKHGEL------LRST----LMNGHL-QWLGYLSSTGVYGHSGGAWVDEDYPANP 185 (364)
Q Consensus 121 ~d~v~~~~~~~~~~~~~~----~~~~~~~~~------l~~a----~~~~~~-~r~v~~Ss~~vy~~~~~~~~~E~~~~~~ 185 (364)
+|+++|+++......... +.......| +..+ +++.+. +++|++||...+.. ..+
T Consensus 82 iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-----------~~~ 150 (258)
T 3a28_C 82 FDVLVNNAGIAQIKPLLEVTEEDLKQIYSVNVFSVFFGIQAASRKFDELGVKGKIINAASIAAIQG-----------FPI 150 (258)
T ss_dssp CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGTSC-----------CTT
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCcEEEEECcchhccC-----------CCC
Confidence 899999987643321101 111111222 2222 223355 79999999765422 123
Q ss_pred CChhHHHHHHHHHHHHHhhhh---cCCcEEEEEecceecCCCCh-HHHHHH--hcCccc-ccccccCCcccccccHHHHH
Q 017914 186 TTELGRLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRSS-VDTIIK--QLPLSE-GQKMRRARQYTSRIHVDDIC 258 (364)
Q Consensus 186 ~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~-~~~~~~--~~~~~~-~~~~~~~~~~~~~i~v~Dva 258 (364)
...|+.+|...+.+.+.++.+ .|+++++++||.+..+.... ...+.. ...... ............+.+++|+|
T Consensus 151 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA 230 (258)
T 3a28_C 151 LSAYSTTKFAVRGLTQAAAQELAPKGHTVNAYAPGIVGTGMWEQIDAELSKINGKPIGENFKEYSSSIALGRPSVPEDVA 230 (258)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSHHHHHHHHHHHHHHCCCTTHHHHHHHTTCTTSSCBCHHHHH
T ss_pred chhHHHHHHHHHHHHHHHHHHHHhhCeEEEEEECCccCChhhhhhhhhhccccCCchHHHHHHHHhcCCCCCccCHHHHH
Confidence 468999999999999888654 48999999999986542110 000000 000000 00000001112368899999
Q ss_pred HHHHHHccCC---CCCceEEEeCCCCC
Q 017914 259 QVLSASIDKP---SAWNVYNVVDDDPA 282 (364)
Q Consensus 259 ~~~~~~l~~~---~~g~~~~i~~~~~~ 282 (364)
++++.++... -.|+.+++.+|..+
T Consensus 231 ~~v~~l~s~~~~~~tG~~i~vdGG~~~ 257 (258)
T 3a28_C 231 GLVSFLASENSNYVTGQVMLVDGGMLY 257 (258)
T ss_dssp HHHHHHHSGGGTTCCSCEEEESSSSCC
T ss_pred HHHHHHhCcccCCCCCCEEEECCCEec
Confidence 9999998764 34899999887543
|
| >1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.78 E-value=1.1e-17 Score=149.12 Aligned_cols=209 Identities=9% Similarity=-0.044 Sum_probs=137.2
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhh-----------hCCceEEEccCChhhH--Hhh----
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELE-----------QSGFDVHLFNANETAL--MIL---- 118 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~-----------~~~~~~~~~D~~~~~~--~~~---- 118 (364)
..+++||||| +|+||++++++|+++|++|++++|+.+....+. ..++.++.+|++|.+. ..+
T Consensus 16 l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~ 95 (303)
T 1yxm_A 16 LQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKSTL 95 (303)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCCCHHHHHHHHHHHH
Confidence 4568999999 999999999999999999999999876543321 2367889999999763 233
Q ss_pred ---ccCceeeEEEEecCCCCCCC----ChhhhHH------HHHHHHhh----cCCccEEEEEccceeecCCCCccccCCC
Q 017914 119 ---TTLKNYTHLLVSIPPLEGTG----DPMLKHG------ELLRSTLM----NGHLQWLGYLSSTGVYGHSGGAWVDEDY 181 (364)
Q Consensus 119 ---~~~d~v~~~~~~~~~~~~~~----~~~~~~~------~~l~~a~~----~~~~~r~v~~Ss~~vy~~~~~~~~~E~~ 181 (364)
..+|+|+|+++......... +...... .++..++. ..+.+++|++||...++
T Consensus 96 ~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~----------- 164 (303)
T 1yxm_A 96 DTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVPTKAG----------- 164 (303)
T ss_dssp HHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCCCTTC-----------
T ss_pred HHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCeEEEEEeecccC-----------
Confidence 25899999998533211111 1111112 23333332 12346899999876221
Q ss_pred CCCCCChhHHHHHHHHHHHHHhhhh---cCCcEEEEEecceecCC--CChHHHHHHhcCcccccccccCCcccccccHHH
Q 017914 182 PANPTTELGRLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPG--RSSVDTIIKQLPLSEGQKMRRARQYTSRIHVDD 256 (364)
Q Consensus 182 ~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D 256 (364)
......|+.+|...+.+.+.++.+ .|++++++|||.++++. ..... .... ... ..........+.+++|
T Consensus 165 -~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~-~~~~-~~~---~~~~~~p~~~~~~~~d 238 (303)
T 1yxm_A 165 -FPLAVHSGAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVENYGS-WGQS-FFE---GSFQKIPAKRIGVPEE 238 (303)
T ss_dssp -CTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTGGGTTSGG-GGGG-GGT---TGGGGSTTSSCBCTHH
T ss_pred -CCcchhhHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCcccchhhhhccc-cchH-HHH---HHHhcCcccCCCCHHH
Confidence 113357999999999999888765 38999999999999983 22110 0000 000 0000011124688999
Q ss_pred HHHHHHHHccCC---CCCceEEEeCCCCC
Q 017914 257 ICQVLSASIDKP---SAWNVYNVVDDDPA 282 (364)
Q Consensus 257 va~~~~~~l~~~---~~g~~~~i~~~~~~ 282 (364)
+|++++.++... ..|+.+++.+|..+
T Consensus 239 vA~~i~~l~~~~~~~~~G~~~~v~gG~~~ 267 (303)
T 1yxm_A 239 VSSVVCFLLSPAASFITGQSVDVDGGRSL 267 (303)
T ss_dssp HHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred HHHHHHHHhCcccccCCCcEEEECCCeec
Confidence 999999998754 34899999888543
|
| >1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.78 E-value=4.3e-18 Score=149.93 Aligned_cols=206 Identities=11% Similarity=-0.013 Sum_probs=137.1
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhh------C---CceEEEccCChhhH--Hhh------
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQ------S---GFDVHLFNANETAL--MIL------ 118 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~------~---~~~~~~~D~~~~~~--~~~------ 118 (364)
..+++||||| +|+||++++++|+++|++|++++|+.++...+.. . ++.++.+|++|.+. ..+
T Consensus 4 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 83 (280)
T 1xkq_A 4 FSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLKQ 83 (280)
T ss_dssp TTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcceEEEEecCCCHHHHHHHHHHHHHh
Confidence 4568999999 9999999999999999999999998766543321 1 57889999999763 222
Q ss_pred -ccCceeeEEEEecCCCCC---CCC-----hhhhHHHH------HHHHh----hcCCccEEEEEccceeecCCCCccccC
Q 017914 119 -TTLKNYTHLLVSIPPLEG---TGD-----PMLKHGEL------LRSTL----MNGHLQWLGYLSSTGVYGHSGGAWVDE 179 (364)
Q Consensus 119 -~~~d~v~~~~~~~~~~~~---~~~-----~~~~~~~~------l~~a~----~~~~~~r~v~~Ss~~vy~~~~~~~~~E 179 (364)
..+|+++|+++....... ..+ .......| +..++ .+.+ +++|++||...+...
T Consensus 84 ~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~------- 155 (280)
T 1xkq_A 84 FGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASK-GEIVNVSSIVAGPQA------- 155 (280)
T ss_dssp HSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGSSSC-------
T ss_pred cCCCCEEEECCCCCCCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHhhcCC-CcEEEecCccccCCC-------
Confidence 368999999976443210 111 11111122 22222 2234 799999997655321
Q ss_pred CCCCCCCChhHHHHHHHHHHHHHhhhh---cCCcEEEEEecceecCCCChH----------HHHHHhcCcccccccccCC
Q 017914 180 DYPANPTTELGRLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRSSV----------DTIIKQLPLSEGQKMRRAR 246 (364)
Q Consensus 180 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~----------~~~~~~~~~~~~~~~~~~~ 246 (364)
..+...|+.+|...+.+.+.++.+ .|+++++|+||.+.++..... ...... +... .
T Consensus 156 ---~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~--~~~~------~ 224 (280)
T 1xkq_A 156 ---QPDFLYYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMAS--HKEC------I 224 (280)
T ss_dssp ---CCSSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHH--CTTT------C
T ss_pred ---CCcccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEeeCcCcCCcccccccccccccchHHHHHH--HHcC------C
Confidence 013468999999999999888743 589999999999987642110 001111 0000 1
Q ss_pred cccccccHHHHHHHHHHHccCC----CCCceEEEeCCCC
Q 017914 247 QYTSRIHVDDICQVLSASIDKP----SAWNVYNVVDDDP 281 (364)
Q Consensus 247 ~~~~~i~v~Dva~~~~~~l~~~----~~g~~~~i~~~~~ 281 (364)
....+.+++|+|++++.++... -.|+.+++.+|..
T Consensus 225 p~~~~~~pedvA~~v~~l~s~~~~~~~tG~~i~vdgG~~ 263 (280)
T 1xkq_A 225 PIGAAGKPEHIANIILFLADRNLSFYILGQSIVADGGTS 263 (280)
T ss_dssp TTSSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGG
T ss_pred CCCCCCCHHHHHHHHHHhcCcccccCccCCeEEECCCcc
Confidence 1234688999999999988653 3489999988743
|
| >3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=99.77 E-value=2.3e-17 Score=146.24 Aligned_cols=210 Identities=11% Similarity=0.036 Sum_probs=137.7
Q ss_pred CCCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCch--hhhhh----h--hCCceEEEccCChhhH--Hh-------
Q 017914 56 WQSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVM--KKKEL----E--QSGFDVHLFNANETAL--MI------- 117 (364)
Q Consensus 56 ~~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~--~~~~l----~--~~~~~~~~~D~~~~~~--~~------- 117 (364)
...+++||||| +|+||++++++|+++|++|++.+|+.. ....+ . ..++.++.+|++|.+. ..
T Consensus 46 ~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 125 (294)
T 3r3s_A 46 RLKDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECGRKAVLLPGDLSDESFARSLVHKAREA 125 (294)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTTCCEEECCCCTTSHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence 34578999999 999999999999999999999988633 22221 1 1457788999999763 22
Q ss_pred hccCceeeEEEEecCCCCCCCC-----hhhhHHHH------HHHHhhcC--CccEEEEEccceeecCCCCccccCCCCCC
Q 017914 118 LTTLKNYTHLLVSIPPLEGTGD-----PMLKHGEL------LRSTLMNG--HLQWLGYLSSTGVYGHSGGAWVDEDYPAN 184 (364)
Q Consensus 118 ~~~~d~v~~~~~~~~~~~~~~~-----~~~~~~~~------l~~a~~~~--~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~ 184 (364)
+..+|+++|+++.........+ .......| +..++... .-.++|++||...+... .
T Consensus 126 ~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~Iv~isS~~~~~~~-----------~ 194 (294)
T 3r3s_A 126 LGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKGASIITTSSIQAYQPS-----------P 194 (294)
T ss_dssp HTCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCGGGTSCC-----------T
T ss_pred cCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECChhhccCC-----------C
Confidence 2468999999876443221111 11122223 33333322 12489999998765432 2
Q ss_pred CCChhHHHHHHHHHHHHHhhhhc---CCcEEEEEecceecCCCChHHHHHHh-cCcccccccccCCcccccccHHHHHHH
Q 017914 185 PTTELGRLRLSAEKGWLNLGRDL---GISAQVFRLGGIYGPGRSSVDTIIKQ-LPLSEGQKMRRARQYTSRIHVDDICQV 260 (364)
Q Consensus 185 ~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilRp~~v~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~i~v~Dva~~ 260 (364)
....|+.+|...+.+.+.++.+. |+++++|+||.+.++.. ... ..-..............+..++|+|++
T Consensus 195 ~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~------~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~ 268 (294)
T 3r3s_A 195 HLLDYAATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQ------ISGGQTQDKIPQFGQQTPMKRAGQPAELAPV 268 (294)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHH------HTTTSCGGGSTTTTTTSTTSSCBCGGGGHHH
T ss_pred CchHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCccccc------cccCCCHHHHHHHHhcCCCCCCcCHHHHHHH
Confidence 34679999999999999887654 89999999999987420 000 000000111111223345789999999
Q ss_pred HHHHccCC---CCCceEEEeCCCCC
Q 017914 261 LSASIDKP---SAWNVYNVVDDDPA 282 (364)
Q Consensus 261 ~~~~l~~~---~~g~~~~i~~~~~~ 282 (364)
++.++... -.|+++++.+|..+
T Consensus 269 v~~L~s~~~~~itG~~i~vdGG~~l 293 (294)
T 3r3s_A 269 YVYLASQESSYVTAEVHGVCGGEHL 293 (294)
T ss_dssp HHHHHSGGGTTCCSCEEEESTTCCC
T ss_pred HHHHhCccccCCCCCEEEECCCccC
Confidence 99998754 24899999988654
|
| >2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor} | Back alignment and structure |
|---|
Probab=99.77 E-value=6.2e-18 Score=146.50 Aligned_cols=203 Identities=11% Similarity=-0.031 Sum_probs=132.8
Q ss_pred CCCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCChhhH--Hhh-------ccCceee
Q 017914 56 WQSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETAL--MIL-------TTLKNYT 125 (364)
Q Consensus 56 ~~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~--~~~-------~~~d~v~ 125 (364)
..++++||||| +|+||++++++|+++|++|++++|+.++.+ .+.++.+|++|.+. ..+ ..+|+++
T Consensus 18 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~-----~~~~~~~Dl~d~~~v~~~~~~~~~~~g~iD~lv 92 (253)
T 2nm0_A 18 SHMSRSVLVTGGNRGIGLAIARAFADAGDKVAITYRSGEPPE-----GFLAVKCDITDTEQVEQAYKEIEETHGPVEVLI 92 (253)
T ss_dssp --CCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSCCCT-----TSEEEECCTTSHHHHHHHHHHHHHHTCSCSEEE
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHhhc-----cceEEEecCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 34568999999 999999999999999999999999865432 37889999999763 222 3579999
Q ss_pred EEEEecCCCC----CCCChhhhHHHHHH------H----HhhcCCccEEEEEccceeecCCCCccccCCCCCCCCChhHH
Q 017914 126 HLLVSIPPLE----GTGDPMLKHGELLR------S----TLMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANPTTELGR 191 (364)
Q Consensus 126 ~~~~~~~~~~----~~~~~~~~~~~~l~------~----a~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~~ 191 (364)
|+++...... ...+.......|+. . .+++.+.+++|++||...+... .....|+.
T Consensus 93 ~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~-----------~~~~~Y~a 161 (253)
T 2nm0_A 93 ANAGVTKDQLLMRMSEEDFTSVVETNLTGTFRVVKRANRAMLRAKKGRVVLISSVVGLLGS-----------AGQANYAA 161 (253)
T ss_dssp EECSCCTTTC---CCTTTTHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCCCCCCCH-----------HHHHHHHH
T ss_pred ECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECchhhCCCC-----------CCcHHHHH
Confidence 9987643221 11222222223322 2 2223456799999997544211 12357999
Q ss_pred HHHHHHHHHHHhhhh---cCCcEEEEEecceecCCCChHHH-HHHhcCcccccccccCCcccccccHHHHHHHHHHHccC
Q 017914 192 LRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRSSVDT-IIKQLPLSEGQKMRRARQYTSRIHVDDICQVLSASIDK 267 (364)
Q Consensus 192 sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~ 267 (364)
+|...+.+.+.++.+ .|+++++++||.+..+....+.. .... + ........+++.+|+|++++.++..
T Consensus 162 sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~--~------~~~~p~~~~~~p~dvA~~i~~l~s~ 233 (253)
T 2nm0_A 162 SKAGLVGFARSLARELGSRNITFNVVAPGFVDTDMTKVLTDEQRAN--I------VSQVPLGRYARPEEIAATVRFLASD 233 (253)
T ss_dssp HHHHHHHHHHHHHHHHCSSSEEEEEEEECSBCC---------CHHH--H------HTTCTTCSCBCHHHHHHHHHHHHSG
T ss_pred HHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchhhcCHHHHHH--H------HhcCCCCCCcCHHHHHHHHHHHhCc
Confidence 999999999887654 47999999999987653211100 0000 0 0000112368899999999999876
Q ss_pred C---CCCceEEEeCCCCC
Q 017914 268 P---SAWNVYNVVDDDPA 282 (364)
Q Consensus 268 ~---~~g~~~~i~~~~~~ 282 (364)
+ -.|+.+.+.+|..+
T Consensus 234 ~~~~~tG~~i~vdGG~~~ 251 (253)
T 2nm0_A 234 DASYITGAVIPVDGGLGM 251 (253)
T ss_dssp GGTTCCSCEEEESTTTTC
T ss_pred cccCCcCcEEEECCcccc
Confidence 4 24889999887543
|
| >4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A* | Back alignment and structure |
|---|
Probab=99.77 E-value=3e-18 Score=150.66 Aligned_cols=204 Identities=9% Similarity=-0.044 Sum_probs=137.7
Q ss_pred CCCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhh-------hCCceEEEccCChhhH--Hhh-------
Q 017914 56 WQSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELE-------QSGFDVHLFNANETAL--MIL------- 118 (364)
Q Consensus 56 ~~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~-------~~~~~~~~~D~~~~~~--~~~------- 118 (364)
...++++|||| +|+||++++++|+++|++|++++|+.++..... ...+.++.+|++|.+. ..+
T Consensus 24 ~l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 103 (277)
T 4fc7_A 24 LLRDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATGRRCLPLSMDVRAPPAVMAAVDQALKEF 103 (277)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 35678999999 999999999999999999999999876543321 2467889999999763 222
Q ss_pred ccCceeeEEEEecCCCCCCC----ChhhhHHH------HHHHHh----hcCCccEEEEEccceeecCCCCccccCCCCCC
Q 017914 119 TTLKNYTHLLVSIPPLEGTG----DPMLKHGE------LLRSTL----MNGHLQWLGYLSSTGVYGHSGGAWVDEDYPAN 184 (364)
Q Consensus 119 ~~~d~v~~~~~~~~~~~~~~----~~~~~~~~------~l~~a~----~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~ 184 (364)
..+|+++|+++......... +....... ++..++ .+.+..++|++||...+....
T Consensus 104 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~----------- 172 (277)
T 4fc7_A 104 GRIDILINCAAGNFLCPAGALSFNAFKTVMDIDTSGTFNVSRVLYEKFFRDHGGVIVNITATLGNRGQA----------- 172 (277)
T ss_dssp SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCSHHHHTCT-----------
T ss_pred CCCCEEEECCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhCCCCC-----------
Confidence 36899999997543221111 11111122 222222 233456899999876543221
Q ss_pred CCChhHHHHHHHHHHHHHhhhh---cCCcEEEEEecceecCCC--------ChHHHHHHhcCcccccccccCCccccccc
Q 017914 185 PTTELGRLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGR--------SSVDTIIKQLPLSEGQKMRRARQYTSRIH 253 (364)
Q Consensus 185 ~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 253 (364)
....|+.+|...+.+.+.++.+ .|+++++|+||.+.++.. .....+.... ....+.+
T Consensus 173 ~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~------------p~~r~~~ 240 (277)
T 4fc7_A 173 LQVHAGSAKAAVDAMTRHLAVEWGPQNIRVNSLAPGPISGTEGLRRLGGPQASLSTKVTAS------------PLQRLGN 240 (277)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSSSHHHHHHSCCHHHHHHHHHTS------------TTSSCBC
T ss_pred CcHHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEECCEecchhhhhccCCHHHHHHHhccC------------CCCCCcC
Confidence 3368999999999999988755 489999999999987531 0011111111 1123478
Q ss_pred HHHHHHHHHHHccCC---CCCceEEEeCCCCC
Q 017914 254 VDDICQVLSASIDKP---SAWNVYNVVDDDPA 282 (364)
Q Consensus 254 v~Dva~~~~~~l~~~---~~g~~~~i~~~~~~ 282 (364)
++|+|++++.++... -.|+++++.+|..+
T Consensus 241 p~dvA~~v~fL~s~~~~~itG~~i~vdGG~~~ 272 (277)
T 4fc7_A 241 KTEIAHSVLYLASPLASYVTGAVLVADGGAWL 272 (277)
T ss_dssp HHHHHHHHHHHHSGGGTTCCSCEEEESTTHHH
T ss_pred HHHHHHHHHHHcCCccCCcCCCEEEECCCccc
Confidence 999999999999754 34899999887533
|
| >4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum} | Back alignment and structure |
|---|
Probab=99.77 E-value=3.1e-18 Score=149.95 Aligned_cols=203 Identities=8% Similarity=-0.071 Sum_probs=138.8
Q ss_pred CCCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhh----h--CCceEEEccCChhhH--Hhh-------c
Q 017914 56 WQSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELE----Q--SGFDVHLFNANETAL--MIL-------T 119 (364)
Q Consensus 56 ~~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~----~--~~~~~~~~D~~~~~~--~~~-------~ 119 (364)
...+++||||| +|+||++++++|+++|++|++++|+.++...+. . .++.++.+|++|.+. ..+ .
T Consensus 23 ~l~gk~~lVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 102 (271)
T 4ibo_A 23 DLGGRTALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNVGHDAEAVAFDVTSESEIIEAFARLDEQGI 102 (271)
T ss_dssp CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHHTC
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHCC
Confidence 45678999999 999999999999999999999999877654432 1 367888999999764 222 2
Q ss_pred cCceeeEEEEecCCCCCCC----ChhhhHHHHH----------HHHhhcCCccEEEEEccceeecCCCCccccCCCCCCC
Q 017914 120 TLKNYTHLLVSIPPLEGTG----DPMLKHGELL----------RSTLMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANP 185 (364)
Q Consensus 120 ~~d~v~~~~~~~~~~~~~~----~~~~~~~~~l----------~~a~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~ 185 (364)
.+|+++|+++......... +.......|+ +..+...+..++|++||...+.. ..+
T Consensus 103 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iV~isS~~~~~~-----------~~~ 171 (271)
T 4ibo_A 103 DVDILVNNAGIQFRKPMIELETADWQRVIDTNLTSAFMIGREAAKRMIPRGYGKIVNIGSLTSELA-----------RAT 171 (271)
T ss_dssp CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSB-----------CTT
T ss_pred CCCEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccHHhCCC-----------CCC
Confidence 6899999998644322111 1111122222 22222345579999998654321 224
Q ss_pred CChhHHHHHHHHHHHHHhhhh---cCCcEEEEEecceecCCCChH-------HHHHHhcCcccccccccCCcccccccHH
Q 017914 186 TTELGRLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRSSV-------DTIIKQLPLSEGQKMRRARQYTSRIHVD 255 (364)
Q Consensus 186 ~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~i~v~ 255 (364)
...|+.+|...+.+.+.++.+ .|++++.++||.+.++..... ..+.... ....+.+++
T Consensus 172 ~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~------------p~~r~~~pe 239 (271)
T 4ibo_A 172 VAPYTVAKGGIKMLTRAMAAEWAQYGIQANAIGPGYMLTDMNQALIDNPEFDAWVKART------------PAKRWGKPQ 239 (271)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHHCHHHHHHHHHHS------------TTCSCBCGG
T ss_pred chhHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeccEeCcchhhcccCHHHHHHHHhcC------------CCCCCcCHH
Confidence 468999999999999988755 589999999999987642211 1111111 112347789
Q ss_pred HHHHHHHHHccCC---CCCceEEEeCCCC
Q 017914 256 DICQVLSASIDKP---SAWNVYNVVDDDP 281 (364)
Q Consensus 256 Dva~~~~~~l~~~---~~g~~~~i~~~~~ 281 (364)
|+|++++.++... -.|+++++.+|..
T Consensus 240 dva~~v~~L~s~~~~~itG~~i~vdGG~~ 268 (271)
T 4ibo_A 240 ELVGTAVFLSASASDYVNGQIIYVDGGML 268 (271)
T ss_dssp GGHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred HHHHHHHHHhCccccCCCCcEEEECCCee
Confidence 9999999988754 3489999988754
|
| >4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.77 E-value=2.5e-17 Score=144.87 Aligned_cols=209 Identities=9% Similarity=-0.026 Sum_probs=127.6
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEe-Cchhhhhh----hh--CCceEEEccCChhhH--Hhh-------c
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCT-NVMKKKEL----EQ--SGFDVHLFNANETAL--MIL-------T 119 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r-~~~~~~~l----~~--~~~~~~~~D~~~~~~--~~~-------~ 119 (364)
..++++|||| +|+||++++++|+++|++|++++| +.+....+ .. ..+.++.+|++|.+. ..+ .
T Consensus 27 ~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 106 (280)
T 4da9_A 27 KARPVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGLGARVIFLRADLADLSSHQATVDAVVAEFG 106 (280)
T ss_dssp CCCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHHTTCCEEEEECCTTSGGGHHHHHHHHHHHHS
T ss_pred cCCCEEEEecCCCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcC
Confidence 4567899999 999999999999999999999996 44433322 11 467889999999763 222 3
Q ss_pred cCceeeEEEEecCCC-CCCC-----ChhhhHHHHH------HHH----hhcCC---ccEEEEEccceeecCCCCccccCC
Q 017914 120 TLKNYTHLLVSIPPL-EGTG-----DPMLKHGELL------RST----LMNGH---LQWLGYLSSTGVYGHSGGAWVDED 180 (364)
Q Consensus 120 ~~d~v~~~~~~~~~~-~~~~-----~~~~~~~~~l------~~a----~~~~~---~~r~v~~Ss~~vy~~~~~~~~~E~ 180 (364)
.+|+++|+++..... .... +.......|+ ..+ +.+.+ ..++|++||...+...
T Consensus 107 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~-------- 178 (280)
T 4da9_A 107 RIDCLVNNAGIASIVRDDFLDLKPENFDTIVGVNLRGTVFFTQAVLKAMLASDARASRSIINITSVSAVMTS-------- 178 (280)
T ss_dssp CCCEEEEECC------CCGGGCCHHHHHHHTTTHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCC--------------
T ss_pred CCCEEEECCCccccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCCEEEEEcchhhccCC--------
Confidence 789999999763211 1111 1111111222 222 22222 4689999997654221
Q ss_pred CCCCCCChhHHHHHHHHHHHHHhhhh---cCCcEEEEEecceecCCCChHHHHHHhcCcccccccccCCcccccccHHHH
Q 017914 181 YPANPTTELGRLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRSSVDTIIKQLPLSEGQKMRRARQYTSRIHVDDI 257 (364)
Q Consensus 181 ~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dv 257 (364)
.....|+.+|...+.+.+.++.+ .|+++++++||.+.++.......-... .+.. .......+.+++|+
T Consensus 179 ---~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~-~~~~-----~~~p~~r~~~pedv 249 (280)
T 4da9_A 179 ---PERLDYCMSKAGLAAFSQGLALRLAETGIAVFEVRPGIIRSDMTAAVSGKYDG-LIES-----GLVPMRRWGEPEDI 249 (280)
T ss_dssp ----CCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC----------------------------CCBCHHHH
T ss_pred ---CCccHHHHHHHHHHHHHHHHHHHHHHhCcEEEEEeecCCcCCchhhcchhHHH-HHhh-----cCCCcCCcCCHHHH
Confidence 13367999999999999988765 589999999999987643211100000 0000 01112345789999
Q ss_pred HHHHHHHccCCC---CCceEEEeCCCCC
Q 017914 258 CQVLSASIDKPS---AWNVYNVVDDDPA 282 (364)
Q Consensus 258 a~~~~~~l~~~~---~g~~~~i~~~~~~ 282 (364)
|++++.++.... .|+++++.+|..+
T Consensus 250 A~~v~~L~s~~~~~itG~~i~vdGG~~~ 277 (280)
T 4da9_A 250 GNIVAGLAGGQFGFATGSVIQADGGLSI 277 (280)
T ss_dssp HHHHHHHHTSTTGGGTTCEEEESTTCC-
T ss_pred HHHHHHHhCccccCCCCCEEEECCCccc
Confidence 999999998654 3899999887543
|
| >1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A* | Back alignment and structure |
|---|
Probab=99.77 E-value=1.7e-18 Score=150.67 Aligned_cols=207 Identities=9% Similarity=-0.039 Sum_probs=127.8
Q ss_pred CCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCChhhH--Hhh----ccCceeeEEEEec
Q 017914 59 PNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETAL--MIL----TTLKNYTHLLVSI 131 (364)
Q Consensus 59 ~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~--~~~----~~~d~v~~~~~~~ 131 (364)
||+||||| +|+||++++++|+++|++|++++|+.++... . +.+|++|.+. ..+ ..+|+++|+++..
T Consensus 1 mk~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~------~-~~~Dl~~~~~v~~~~~~~~~~id~lv~~Ag~~ 73 (257)
T 1fjh_A 1 MSIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEVIA------D-LSTAEGRKQAIADVLAKCSKGMDGLVLCAGLG 73 (257)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC------C-TTSHHHHHHHHHHHHTTCTTCCSEEEECCCCC
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhhcc------c-cccCCCCHHHHHHHHHHhCCCCCEEEECCCCC
Confidence 46899999 9999999999999999999999998654321 1 5689998764 333 3459999998754
Q ss_pred CCCCCCCChhhhHHH------HHHHHh----hcCCccEEEEEccceeecCCCCccc-----c------------CCCCCC
Q 017914 132 PPLEGTGDPMLKHGE------LLRSTL----MNGHLQWLGYLSSTGVYGHSGGAWV-----D------------EDYPAN 184 (364)
Q Consensus 132 ~~~~~~~~~~~~~~~------~l~~a~----~~~~~~r~v~~Ss~~vy~~~~~~~~-----~------------E~~~~~ 184 (364)
... ......... ++..++ ++.+.+++|++||...+......+. . +..+..
T Consensus 74 ~~~---~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (257)
T 1fjh_A 74 PQT---KVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGEEAKARAIVEHAGEQG 150 (257)
T ss_dssp TTC---SSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSSCGGGCTTHHHHHHTCHHHHHHHHHTCCTTH
T ss_pred CCc---ccHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEECChhhhccccccchhhhhhcccchhhhhhhhhcccCCC
Confidence 311 111222222 223332 3556689999999877631110000 0 001222
Q ss_pred CCChhHHHHHHHHHHHHHhhhh---cCCcEEEEEecceecCCCChH-HHHHHhcCcccccccccCCcccccccHHHHHHH
Q 017914 185 PTTELGRLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRSSV-DTIIKQLPLSEGQKMRRARQYTSRIHVDDICQV 260 (364)
Q Consensus 185 ~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~ 260 (364)
+...|+.+|.+.|.+++.++.+ .|+++++|+||.+.++..... ........... . ......+++++|+|++
T Consensus 151 ~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~---~--~~~~~~~~~~~dvA~~ 225 (257)
T 1fjh_A 151 GNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQDPRYGESIAK---F--VPPMGRRAEPSEMASV 225 (257)
T ss_dssp HHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC------------------------C--CCSTTSCCCTHHHHHH
T ss_pred CccHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCccchhhccchhHHHHHHh---c--ccccCCCCCHHHHHHH
Confidence 3468999999999999988755 589999999999987642211 10000000000 0 0011236889999999
Q ss_pred HHHHccCC---CCCceEEEeCCC
Q 017914 261 LSASIDKP---SAWNVYNVVDDD 280 (364)
Q Consensus 261 ~~~~l~~~---~~g~~~~i~~~~ 280 (364)
++.++..+ -.|+.|++.+|.
T Consensus 226 ~~~l~~~~~~~~tG~~~~vdgG~ 248 (257)
T 1fjh_A 226 IAFLMSPAASYVHGAQIVIDGGI 248 (257)
T ss_dssp HHHHTSGGGTTCCSCEEEESTTH
T ss_pred HHHHhCchhcCCcCCEEEECCCc
Confidence 99999765 248899988763
|
| >1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.77 E-value=4.6e-18 Score=149.11 Aligned_cols=187 Identities=8% Similarity=-0.060 Sum_probs=130.1
Q ss_pred CCCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhh------hCCceEEEccCChhhH--Hhh-------c
Q 017914 56 WQSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELE------QSGFDVHLFNANETAL--MIL-------T 119 (364)
Q Consensus 56 ~~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~------~~~~~~~~~D~~~~~~--~~~-------~ 119 (364)
...+++||||| +|+||++++++|+++|++|++++|+.+..+.+. ..++.++.+|++|.+. ..+ .
T Consensus 28 ~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g 107 (272)
T 1yb1_A 28 SVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEIG 107 (272)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHHhcCCeEEEEEeeCCCHHHHHHHHHHHHHHCC
Confidence 35568999999 999999999999999999999999876554332 1367899999999763 222 3
Q ss_pred cCceeeEEEEecCCCCCCCChh----hhHHHH----------HHHHhhcCCccEEEEEccceeecCCCCccccCCCCCCC
Q 017914 120 TLKNYTHLLVSIPPLEGTGDPM----LKHGEL----------LRSTLMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANP 185 (364)
Q Consensus 120 ~~d~v~~~~~~~~~~~~~~~~~----~~~~~~----------l~~a~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~ 185 (364)
.+|+|+|+++............ .....| ++..+++.+.+++|++||...+... .+
T Consensus 108 ~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~-----------~~ 176 (272)
T 1yb1_A 108 DVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHVSV-----------PF 176 (272)
T ss_dssp CCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-CCCH-----------HH
T ss_pred CCcEEEECCCcCCCcchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEechhhcCCC-----------CC
Confidence 6899999997654322111111 111122 2233335567899999998765321 12
Q ss_pred CChhHHHHHHHHHHHHHhhhhc------CCcEEEEEecceecCCCChHHHHHHhcCcccccccccCCcccccccHHHHHH
Q 017914 186 TTELGRLRLSAEKGWLNLGRDL------GISAQVFRLGGIYGPGRSSVDTIIKQLPLSEGQKMRRARQYTSRIHVDDICQ 259 (364)
Q Consensus 186 ~~~Y~~sK~~~E~~~~~~~~~~------~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~ 259 (364)
...|+.+|.+.|.+++.++.+. |++++++|||.+.++.... . ......+++++|+|+
T Consensus 177 ~~~Y~~sK~a~~~l~~~la~e~~~~~~~gi~v~~v~Pg~v~t~~~~~------------~-----~~~~~~~~~~~dva~ 239 (272)
T 1yb1_A 177 LLAYCSSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIKN------------P-----STSLGPTLEPEEVVN 239 (272)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCSTTC------------T-----HHHHCCCCCHHHHHH
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCcccCCcccc------------c-----cccccCCCCHHHHHH
Confidence 3579999999999998887643 7999999999987654210 0 001234588999999
Q ss_pred HHHHHccCCCC
Q 017914 260 VLSASIDKPSA 270 (364)
Q Consensus 260 ~~~~~l~~~~~ 270 (364)
+++.++.++..
T Consensus 240 ~i~~~~~~~~~ 250 (272)
T 1yb1_A 240 RLMHGILTEQK 250 (272)
T ss_dssp HHHHHHHTTCS
T ss_pred HHHHHHHcCCC
Confidence 99999987644
|
| >3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A* | Back alignment and structure |
|---|
Probab=99.77 E-value=3.2e-17 Score=144.84 Aligned_cols=213 Identities=11% Similarity=-0.074 Sum_probs=137.5
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeC----------------chhhhhh----h--hCCceEEEccCChh
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTN----------------VMKKKEL----E--QSGFDVHLFNANET 113 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~----------------~~~~~~l----~--~~~~~~~~~D~~~~ 113 (364)
..++++|||| +|.||+++++.|+++|++|++++|+ .+....+ . ...+.++.+|++|.
T Consensus 9 l~~k~~lVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~ 88 (286)
T 3uve_A 9 VEGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNRRIVTAEVDVRDY 88 (286)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCH
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhcCCceEEEEcCCCCH
Confidence 4568999999 9999999999999999999999987 2222221 1 14578899999997
Q ss_pred hH--Hhh-------ccCceeeEEEEecCCCCCCC-----ChhhhHHHHH------HHHh----hcCC-ccEEEEEcccee
Q 017914 114 AL--MIL-------TTLKNYTHLLVSIPPLEGTG-----DPMLKHGELL------RSTL----MNGH-LQWLGYLSSTGV 168 (364)
Q Consensus 114 ~~--~~~-------~~~d~v~~~~~~~~~~~~~~-----~~~~~~~~~l------~~a~----~~~~-~~r~v~~Ss~~v 168 (364)
+. ..+ ..+|+++|+++......... +.......|+ ..++ .+.+ ..++|++||...
T Consensus 89 ~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~ 168 (286)
T 3uve_A 89 DALKAAVDSGVEQLGRLDIIVANAGIGNGGDTLDKTSEEDWTEMIDINLAGVWKTVKAGVPHMIAGGRGGSIILTSSVGG 168 (286)
T ss_dssp HHHHHHHHHHHHHHSCCCEEEECCCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGG
T ss_pred HHHHHHHHHHHHHhCCCCEEEECCcccCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCcEEEEECchhh
Confidence 64 222 36899999998654332111 1111122222 2222 2222 468999999765
Q ss_pred ecCCCCccccCCCCCCCCChhHHHHHHHHHHHHHhhhh---cCCcEEEEEecceecCCCChHHHHHHhcC-ccccc----
Q 017914 169 YGHSGGAWVDEDYPANPTTELGRLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRSSVDTIIKQLP-LSEGQ---- 240 (364)
Q Consensus 169 y~~~~~~~~~E~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~~-~~~~~---- 240 (364)
+... .....|+.+|...+.+.+.++.+ .|++++.|+||.+..+............. .....
T Consensus 169 ~~~~-----------~~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~ 237 (286)
T 3uve_A 169 LKAY-----------PHTGHYVAAKHGVVGLMRAFGVELGQHMIRVNSVHPTHVKTPMLHNEGTFKMFRPDLENPGPDDM 237 (286)
T ss_dssp TSCC-----------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSTTTSSHHHHHHHCTTSSSCCHHHH
T ss_pred ccCC-----------CCccHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCCcccccchhhhccccccccchhhH
Confidence 4221 23468999999999999988755 58999999999998875332111111100 00000
Q ss_pred ----ccccCCcccccccHHHHHHHHHHHccCC---CCCceEEEeCCCC
Q 017914 241 ----KMRRARQYTSRIHVDDICQVLSASIDKP---SAWNVYNVVDDDP 281 (364)
Q Consensus 241 ----~~~~~~~~~~~i~v~Dva~~~~~~l~~~---~~g~~~~i~~~~~ 281 (364)
..... ....+.+.+|+|++++.++... -.|+++++.+|..
T Consensus 238 ~~~~~~~~~-~p~r~~~p~dvA~~v~fL~s~~a~~itG~~i~vdGG~~ 284 (286)
T 3uve_A 238 APICQMFHT-LPIPWVEPIDISNAVLFFASDEARYITGVTLPIDAGSC 284 (286)
T ss_dssp HHHHHTTCS-SSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred HHHHHhhhc-cCCCcCCHHHHHHHHHHHcCccccCCcCCEEeECCccc
Confidence 00011 1145689999999999998754 3489999988753
|
| >1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.77 E-value=2.1e-17 Score=144.64 Aligned_cols=217 Identities=12% Similarity=-0.018 Sum_probs=138.1
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhh--CCceEEEccCChhhH--Hhh-------ccCcee
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQ--SGFDVHLFNANETAL--MIL-------TTLKNY 124 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~--~~~~~~~~D~~~~~~--~~~-------~~~d~v 124 (364)
..+++||||| +|+||++++++|+++|++|++++|+.+....+.. .++.++.+|++|.+. ..+ ..+|++
T Consensus 7 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~l 86 (270)
T 1yde_A 7 YAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELPGAVFILCDVTQEDDVKTLVSETIRRFGRLDCV 86 (270)
T ss_dssp TTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEE
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCeEEEcCCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 4568999999 9999999999999999999999998776554432 357889999999763 222 368999
Q ss_pred eEEEEecCCCCCCCC-----hhhhHHH------HHHHHhh----cCCccEEEEEccceeecCCCCccccCCCCCCCCChh
Q 017914 125 THLLVSIPPLEGTGD-----PMLKHGE------LLRSTLM----NGHLQWLGYLSSTGVYGHSGGAWVDEDYPANPTTEL 189 (364)
Q Consensus 125 ~~~~~~~~~~~~~~~-----~~~~~~~------~l~~a~~----~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y 189 (364)
+|+++.........+ ....... ++..++. +. .+++|++||...+... .....|
T Consensus 87 v~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~g~iv~isS~~~~~~~-----------~~~~~Y 154 (270)
T 1yde_A 87 VNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKS-QGNVINISSLVGAIGQ-----------AQAVPY 154 (270)
T ss_dssp EECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEECCHHHHHCC-----------TTCHHH
T ss_pred EECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHC-CCEEEEEcCccccCCC-----------CCCccc
Confidence 999976432221111 1111122 2222221 22 4699999987533211 123579
Q ss_pred HHHHHHHHHHHHHhhhh---cCCcEEEEEecceecCCCChHHHHHHhcCccc--ccccccCCcccccccHHHHHHHHHHH
Q 017914 190 GRLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRSSVDTIIKQLPLSE--GQKMRRARQYTSRIHVDDICQVLSAS 264 (364)
Q Consensus 190 ~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~i~v~Dva~~~~~~ 264 (364)
+.+|...+.+.+.++.+ .|+++++|+||.++++.. ..+.....-.. ............+...+|+|++++.+
T Consensus 155 ~asKaa~~~~~~~la~e~~~~gi~vn~v~Pg~v~t~~~---~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~v~~L 231 (270)
T 1yde_A 155 VATKGAVTAMTKALALDESPYGVRVNCISPGNIWTPLW---EELAALMPDPRASIREGMLAQPLGRMGQPAEVGAAAVFL 231 (270)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHH---HHHHTTSSSHHHHHHHHHHTSTTSSCBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhhhCcEEEEEEeCccccchh---hhhhhcccchHHHHHHHhhcCCCCCCcCHHHHHHHHHHH
Confidence 99999999999988754 589999999999987531 11100000000 00000000112247899999999988
Q ss_pred ccCC--CCCceEEEeCCCCCCHHHHH
Q 017914 265 IDKP--SAWNVYNVVDDDPAPREEVF 288 (364)
Q Consensus 265 l~~~--~~g~~~~i~~~~~~s~~el~ 288 (364)
+... -.|+.+++.+|..+.+.+..
T Consensus 232 ~s~~~~itG~~i~vdGG~~~~~~~~~ 257 (270)
T 1yde_A 232 ASEANFCTGIELLVTGGAELGYGCKA 257 (270)
T ss_dssp HHHCTTCCSCEEEESTTTTSCC----
T ss_pred cccCCCcCCCEEEECCCeecccCcCc
Confidence 8643 34899999998776655443
|
| >3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.77 E-value=1.4e-17 Score=146.80 Aligned_cols=212 Identities=10% Similarity=-0.069 Sum_probs=138.1
Q ss_pred CCCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhh------CCceEEEccCChhhH--Hhh-------c
Q 017914 56 WQSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQ------SGFDVHLFNANETAL--MIL-------T 119 (364)
Q Consensus 56 ~~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~------~~~~~~~~D~~~~~~--~~~-------~ 119 (364)
...+++||||| +|+||++++++|+++|++|++++|+.+....+.. ..+.++.+|++|.+. ..+ .
T Consensus 25 ~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 104 (283)
T 3v8b_A 25 NQPSPVALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAGGQAIALEADVSDELQMRNAVRDLVLKFG 104 (283)
T ss_dssp --CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHTTTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence 34568899999 9999999999999999999999998776544321 357789999999763 222 3
Q ss_pred cCceeeEEEEecCCCCCCCC-----hhhhHHHH------HHHHh----hcCCccEEEEEccceeecCCCCccccCCCCCC
Q 017914 120 TLKNYTHLLVSIPPLEGTGD-----PMLKHGEL------LRSTL----MNGHLQWLGYLSSTGVYGHSGGAWVDEDYPAN 184 (364)
Q Consensus 120 ~~d~v~~~~~~~~~~~~~~~-----~~~~~~~~------l~~a~----~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~ 184 (364)
.+|+++|+++.........+ .......| +..++ ++.+..++|++||...+... +..
T Consensus 105 ~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~---------~~~ 175 (283)
T 3v8b_A 105 HLDIVVANAGINGVWAPIDDLKPFEWDETIAVNLRGTFLTLHLTVPYLKQRGGGAIVVVSSINGTRTF---------TTP 175 (283)
T ss_dssp CCCEEEECCCCCCCBCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBC---------CST
T ss_pred CCCEEEECCCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCceEEEEcChhhccCC---------CCC
Confidence 68999999986433221111 11112222 23332 34556799999997543210 112
Q ss_pred CCChhHHHHHHHHHHHHHhhhh---cCCcEEEEEecceecCCCChH---HHHHHhcCcccccccccCCcc--cccccHHH
Q 017914 185 PTTELGRLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRSSV---DTIIKQLPLSEGQKMRRARQY--TSRIHVDD 256 (364)
Q Consensus 185 ~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~---~~~~~~~~~~~~~~~~~~~~~--~~~i~v~D 256 (364)
+...|+.+|...+.+.+.++.+ .|+++++|+||.+..+..... ........... ....... ..+...+|
T Consensus 176 ~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~---~~~~~p~~~~r~~~ped 252 (283)
T 3v8b_A 176 GATAYTATKAAQVAIVQQLALELGKHHIRVNAVCPGAIETNISDNTKLRHEEETAIPVEW---PKGQVPITDGQPGRSED 252 (283)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHTTTTTEEEEEEEECSBSSCTTCCTTBCCHHHHSCCCBC---TTCSCGGGTTCCBCHHH
T ss_pred CchHHHHHHHHHHHHHHHHHHHhCccCcEEEEEEeCCCcCCcccccccccchhhhhhhhh---hhhcCccccCCCCCHHH
Confidence 4468999999999999988765 479999999999987643211 00000000000 0000011 23478999
Q ss_pred HHHHHHHHccCCC---CCceEEEeCC
Q 017914 257 ICQVLSASIDKPS---AWNVYNVVDD 279 (364)
Q Consensus 257 va~~~~~~l~~~~---~g~~~~i~~~ 279 (364)
+|++++.++.... .|+++++.+|
T Consensus 253 vA~~v~fL~s~~a~~itG~~i~vdGG 278 (283)
T 3v8b_A 253 VAELIRFLVSERARHVTGSPVWIDGG 278 (283)
T ss_dssp HHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred HHHHHHHHcCccccCCcCCEEEECcC
Confidence 9999999987542 4899999876
|
| >2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=99.77 E-value=1.7e-17 Score=146.52 Aligned_cols=205 Identities=14% Similarity=0.069 Sum_probs=134.0
Q ss_pred CCCCeEEEEc-C--ChhhHHHHHHHHhCCCEEEEEEeCch---hhhhhhh--CCceEEEccCChhhH--Hhh-------c
Q 017914 57 QSPNRMLILG-M--GFVGRIFAEKIKNQGWVVSGTCTNVM---KKKELEQ--SGFDVHLFNANETAL--MIL-------T 119 (364)
Q Consensus 57 ~~~~~vlVtG-t--G~iG~~l~~~L~~~g~~V~~~~r~~~---~~~~l~~--~~~~~~~~D~~~~~~--~~~-------~ 119 (364)
..+++||||| + |+||+++++.|+++|++|++++|+.+ ....+.. .++.++.+|++|.+. ..+ .
T Consensus 19 l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g 98 (285)
T 2p91_A 19 LEGKRALITGVANERSIAYGIAKSFHREGAQLAFTYATPKLEKRVREIAKGFGSDLVVKCDVSLDEDIKNLKKFLEENWG 98 (285)
T ss_dssp TTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHTS
T ss_pred cCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 4567899998 8 89999999999999999999999874 2222221 347889999999763 222 3
Q ss_pred cCceeeEEEEecCCC---CCC-----CChhhhHHH------HHHHHhhcC---CccEEEEEccceeecCCCCccccCCCC
Q 017914 120 TLKNYTHLLVSIPPL---EGT-----GDPMLKHGE------LLRSTLMNG---HLQWLGYLSSTGVYGHSGGAWVDEDYP 182 (364)
Q Consensus 120 ~~d~v~~~~~~~~~~---~~~-----~~~~~~~~~------~l~~a~~~~---~~~r~v~~Ss~~vy~~~~~~~~~E~~~ 182 (364)
.+|+++|+++..... ... .+....... ++..++... ..+++|++||...+..
T Consensus 99 ~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~----------- 167 (285)
T 2p91_A 99 SLDIIVHSIAYAPKEEFKGGVIDTSREGFKIAMDISVYSLIALTRELLPLMEGRNGAIVTLSYYGAEKV----------- 167 (285)
T ss_dssp CCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGGTTSCCEEEEEECGGGTSB-----------
T ss_pred CCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCEEEEEccchhccC-----------
Confidence 689999999864320 111 111111222 333333221 2369999999654421
Q ss_pred CCCCChhHHHHHHHHHHHHHhhhh---cCCcEEEEEecceecCCCCh---HHHHHHhcCcccccccccCCcccccccHHH
Q 017914 183 ANPTTELGRLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRSS---VDTIIKQLPLSEGQKMRRARQYTSRIHVDD 256 (364)
Q Consensus 183 ~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D 256 (364)
..+...|+.+|...+.+.+.++.+ .|+++++|+||.+.++.... ...+... +....+ ...+.+++|
T Consensus 168 ~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~--~~~~~p------~~~~~~~~d 239 (285)
T 2p91_A 168 VPHYNVMGIAKAALESTVRYLAYDIAKHGHRINAISAGPVKTLAAYSITGFHLLMEH--TTKVNP------FGKPITIED 239 (285)
T ss_dssp CTTTTHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCSCC--CTTHHHHHHH--HHHHST------TSSCCCHHH
T ss_pred CCCccHHHHHHHHHHHHHHHHHHHhcccCcEEEEEEeCcccCchhhcccchHHHHHH--HHhcCC------CCCCcCHHH
Confidence 113468999999999999988755 48999999999999875321 1111111 000000 122478999
Q ss_pred HHHHHHHHccCC---CCCceEEEeCCC
Q 017914 257 ICQVLSASIDKP---SAWNVYNVVDDD 280 (364)
Q Consensus 257 va~~~~~~l~~~---~~g~~~~i~~~~ 280 (364)
+|++++.++... -.|+.|++.+|.
T Consensus 240 va~~~~~l~s~~~~~~tG~~~~vdgg~ 266 (285)
T 2p91_A 240 VGDTAVFLCSDWARAITGEVVHVDNGY 266 (285)
T ss_dssp HHHHHHHHTSGGGTTCCSCEEEESTTG
T ss_pred HHHHHHHHcCCcccCCCCCEEEECCCc
Confidence 999999998753 248899998874
|
| >3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=99.77 E-value=3e-18 Score=153.97 Aligned_cols=222 Identities=11% Similarity=-0.034 Sum_probs=147.0
Q ss_pred CCCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeC----------chhhhh----hhh--CCceEEEccCChhhH--H
Q 017914 56 WQSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTN----------VMKKKE----LEQ--SGFDVHLFNANETAL--M 116 (364)
Q Consensus 56 ~~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~----------~~~~~~----l~~--~~~~~~~~D~~~~~~--~ 116 (364)
...+++||||| +|+||+++++.|+++|++|++++|+ .+.... +.. ..+.++.+|++|.+. .
T Consensus 24 ~l~gk~vlVTGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~ 103 (322)
T 3qlj_A 24 VVDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAVADGSNVADWDQAAG 103 (322)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTCEEEEECCCTTSHHHHHH
T ss_pred ccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCcccccccccccHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHH
Confidence 35568999999 9999999999999999999999987 222222 222 346788899999764 2
Q ss_pred hh-------ccCceeeEEEEecCCCCCCC----ChhhhHHHHHHH------Hhh----c---CC---ccEEEEEccceee
Q 017914 117 IL-------TTLKNYTHLLVSIPPLEGTG----DPMLKHGELLRS------TLM----N---GH---LQWLGYLSSTGVY 169 (364)
Q Consensus 117 ~~-------~~~d~v~~~~~~~~~~~~~~----~~~~~~~~~l~~------a~~----~---~~---~~r~v~~Ss~~vy 169 (364)
.+ ..+|+++|+++......... +.......|+.. ++. . .+ -.+||++||...+
T Consensus 104 ~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~ 183 (322)
T 3qlj_A 104 LIQTAVETFGGLDVLVNNAGIVRDRMIANTSEEEFDAVIAVHLKGHFATMRHAAAYWRGLSKAGKAVDGRIINTSSGAGL 183 (322)
T ss_dssp HHHHHHHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCEEEEEECCHHHH
T ss_pred HHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHccccCCCCCcEEEEEcCHHHc
Confidence 22 37899999998654322111 111122233332 221 1 11 1489999997654
Q ss_pred cCCCCccccCCCCCCCCChhHHHHHHHHHHHHHhhhh---cCCcEEEEEecceecCCCC-hHHHHHHhcCcccccccccC
Q 017914 170 GHSGGAWVDEDYPANPTTELGRLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRS-SVDTIIKQLPLSEGQKMRRA 245 (364)
Q Consensus 170 ~~~~~~~~~E~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~-~~~~~~~~~~~~~~~~~~~~ 245 (364)
.... ....|+.+|.+.+.+.+.++.+ .|+++++|+|| +..+... .... .....
T Consensus 184 ~~~~-----------~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG-~~t~~~~~~~~~-----------~~~~~ 240 (322)
T 3qlj_A 184 QGSV-----------GQGNYSAAKAGIATLTLVGAAEMGRYGVTVNAIAPS-ARTRMTETVFAE-----------MMATQ 240 (322)
T ss_dssp HCBT-----------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-TTSCCSCCSCCC----------------
T ss_pred cCCC-----------CCccHHHHHHHHHHHHHHHHHHhcccCcEEEEecCC-CCCccchhhhhh-----------hhhcc
Confidence 3221 3368999999999999988765 58999999999 5433211 1000 00011
Q ss_pred CcccccccHHHHHHHHHHHccCCC---CCceEEEeCCCC-----------------CCHHHHHHHHHHHhcCCCC
Q 017914 246 RQYTSRIHVDDICQVLSASIDKPS---AWNVYNVVDDDP-----------------APREEVFAYAWDLVEKKWP 300 (364)
Q Consensus 246 ~~~~~~i~v~Dva~~~~~~l~~~~---~g~~~~i~~~~~-----------------~s~~el~~~i~~~~g~~~~ 300 (364)
...+.++.++|+|++++.++.... .|+.|++.+|.. ++..|+++.+.+.+|.+.+
T Consensus 241 ~~~~~~~~pedva~~v~~L~s~~~~~itG~~i~vdGG~~~~~~~~~~~~~~~~~~~~~~~el~~~~~~~~~~~~~ 315 (322)
T 3qlj_A 241 DQDFDAMAPENVSPLVVWLGSAEARDVTGKVFEVEGGKIRVAEGWAHGPQIDKGARWDPAELGPVVADLLGKARP 315 (322)
T ss_dssp ---CCTTCGGGTHHHHHHHTSGGGGGCCSCEEEEETTEEEEEECCEEEEEEECSSCCCGGGHHHHHHHHHHHSCC
T ss_pred ccccCCCCHHHHHHHHHHHhCccccCCCCCEEEECCCccccCCCcccccccCccCCCCHHHHHHHHHHHhhccCC
Confidence 122345789999999999987543 489999988753 3779999999999986533
|
| >3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=99.76 E-value=1.3e-17 Score=147.06 Aligned_cols=205 Identities=12% Similarity=0.042 Sum_probs=137.9
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhh---CCceEEEccCChhhH--Hhh------ccCcee
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQ---SGFDVHLFNANETAL--MIL------TTLKNY 124 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~---~~~~~~~~D~~~~~~--~~~------~~~d~v 124 (364)
..+++||||| +|+||++++++|+++|++|++++|+.++...+.. ..+.++.+|++|.+. ..+ ..+|.+
T Consensus 28 l~~k~vlVTGas~GIG~aia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~id~l 107 (281)
T 3ppi_A 28 FEGASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALADELGNRAEFVSTNVTSEDSVLAAIEAANQLGRLRYA 107 (281)
T ss_dssp GTTEEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHTTSSEEEEE
T ss_pred cCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHhCCCCeE
Confidence 4567899999 9999999999999999999999998876555432 468899999999764 222 256888
Q ss_pred eEEEEecCCCCCC------C-C---hhhhHHH------HHHHHhh----c------CCccEEEEEccceeecCCCCcccc
Q 017914 125 THLLVSIPPLEGT------G-D---PMLKHGE------LLRSTLM----N------GHLQWLGYLSSTGVYGHSGGAWVD 178 (364)
Q Consensus 125 ~~~~~~~~~~~~~------~-~---~~~~~~~------~l~~a~~----~------~~~~r~v~~Ss~~vy~~~~~~~~~ 178 (364)
+|+++........ . + ....... ++..++. . .+..++|++||...+...
T Consensus 108 v~~aag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~------ 181 (281)
T 3ppi_A 108 VVAHGGFGVAQRIVQRDGSPADMGGFTKTIDLYLNGTYNVARLVAASIAAAEPRENGERGALVLTASIAGYEGQ------ 181 (281)
T ss_dssp EECCCCCCCCCCSBCTTSCBCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSCCCTTSCCEEEEEECCGGGTSCC------
T ss_pred EEccCcccccccccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcccccCCCeEEEEEecccccCCC------
Confidence 8885444332211 0 1 1111112 2222221 2 345689999997654221
Q ss_pred CCCCCCCCChhHHHHHHHHHHHHHhhhh---cCCcEEEEEecceecCCCC-----hHHHHHHhcCcccccccccCCcccc
Q 017914 179 EDYPANPTTELGRLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRS-----SVDTIIKQLPLSEGQKMRRARQYTS 250 (364)
Q Consensus 179 E~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (364)
.....|+.+|.+.+.+.+.++.+ .|+++++++||.+..+... ....+....+. ...
T Consensus 182 -----~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~-----------~~~ 245 (281)
T 3ppi_A 182 -----IGQTAYAAAKAGVIGLTIAAARDLSSAGIRVNTIAPGTMKTPIMESVGEEALAKFAANIPF-----------PKR 245 (281)
T ss_dssp -----TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTTCHHHHHHHHHTCCS-----------SSS
T ss_pred -----CCCcccHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCCchhhhcccHHHHHHHHhcCCC-----------CCC
Confidence 23468999999999998887754 3899999999998654210 01111111110 134
Q ss_pred cccHHHHHHHHHHHccCCC-CCceEEEeCCCCCC
Q 017914 251 RIHVDDICQVLSASIDKPS-AWNVYNVVDDDPAP 283 (364)
Q Consensus 251 ~i~v~Dva~~~~~~l~~~~-~g~~~~i~~~~~~s 283 (364)
+.+++|+|++++.++.... .|+++++.+|..++
T Consensus 246 ~~~pedvA~~v~~l~s~~~~tG~~i~vdGG~~~~ 279 (281)
T 3ppi_A 246 LGTPDEFADAAAFLLTNGYINGEVMRLDGAQRFT 279 (281)
T ss_dssp CBCHHHHHHHHHHHHHCSSCCSCEEEESTTCCCC
T ss_pred CCCHHHHHHHHHHHHcCCCcCCcEEEECCCcccC
Confidence 5889999999999998653 48999999887654
|
| >3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.76 E-value=1.2e-17 Score=145.15 Aligned_cols=204 Identities=12% Similarity=0.057 Sum_probs=134.6
Q ss_pred CCCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEE-eCchhhhh----hh--hCCceEEEccCChhhH--Hhh-------
Q 017914 56 WQSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTC-TNVMKKKE----LE--QSGFDVHLFNANETAL--MIL------- 118 (364)
Q Consensus 56 ~~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~-r~~~~~~~----l~--~~~~~~~~~D~~~~~~--~~~------- 118 (364)
...+++||||| +|+||++++++|+++|++|++++ |+.+.... +. ...+.++.+|++|.+. ..+
T Consensus 10 ~~~~k~vlITGas~giG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 89 (256)
T 3ezl_A 10 VMSQRIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKALGFDFYASEGNVGDWDSTKQAFDKVKAEV 89 (256)
T ss_dssp ---CEEEEETTTTSHHHHHHHHHHHHTTEEEEEEECTTCSSHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeeEEEecCCCCHHHHHHHHHHHHHhc
Confidence 45568999999 99999999999999999999988 44333222 11 1467889999999663 222
Q ss_pred ccCceeeEEEEecCCCCCCC----ChhhhHHHHH----------HHHhhcCCccEEEEEccceeecCCCCccccCCCCCC
Q 017914 119 TTLKNYTHLLVSIPPLEGTG----DPMLKHGELL----------RSTLMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPAN 184 (364)
Q Consensus 119 ~~~d~v~~~~~~~~~~~~~~----~~~~~~~~~l----------~~a~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~ 184 (364)
..+|.++|+++......... +.......|+ +..++..+..++|++||...+... .
T Consensus 90 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~ 158 (256)
T 3ezl_A 90 GEIDVLVNNAGITRDVVFRKMTREDWQAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQKGQ-----------F 158 (256)
T ss_dssp CCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCGGGSC-----------S
T ss_pred CCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhhccCC-----------C
Confidence 36799999987654322111 1111122222 222334556799999997654221 2
Q ss_pred CCChhHHHHHHHHHHHHHhhhh---cCCcEEEEEecceecCCCC-----hHHHHHHhcCcccccccccCCcccccccHHH
Q 017914 185 PTTELGRLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRS-----SVDTIIKQLPLSEGQKMRRARQYTSRIHVDD 256 (364)
Q Consensus 185 ~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D 256 (364)
+...|+.+|.+.+.+.+.++.+ .|+++++++||.+.++... ....+.... ....+.+++|
T Consensus 159 ~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~------------~~~~~~~~~d 226 (256)
T 3ezl_A 159 GQTNYSTAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVKAIRPDVLEKIVATI------------PVRRLGSPDE 226 (256)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSCHHHHHHHHHHS------------TTSSCBCHHH
T ss_pred CCcccHHHHHHHHHHHHHHHHHHHHhCCEEEEEEECcccCccccccCHHHHHHHHhcC------------CCCCCcCHHH
Confidence 4468999999999999888754 5899999999998764311 111111111 1133578999
Q ss_pred HHHHHHHHccCC---CCCceEEEeCCCCC
Q 017914 257 ICQVLSASIDKP---SAWNVYNVVDDDPA 282 (364)
Q Consensus 257 va~~~~~~l~~~---~~g~~~~i~~~~~~ 282 (364)
+|++++.++... -.|+++++.+|..+
T Consensus 227 va~~~~~l~s~~~~~~tG~~i~vdgG~~~ 255 (256)
T 3ezl_A 227 IGSIVAWLASEESGFSTGADFSLNGGLHM 255 (256)
T ss_dssp HHHHHHHHHSGGGTTCCSCEEEESTTSCC
T ss_pred HHHHHHHHhCCcccCCcCcEEEECCCEeC
Confidence 999999988654 34899999887543
|
| >3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=99.76 E-value=3.1e-17 Score=143.34 Aligned_cols=208 Identities=7% Similarity=-0.075 Sum_probs=135.8
Q ss_pred CCCCCeEEEEc-CC-hhhHHHHHHHHhCCCEEEEEEeCchhhhhhh-------hCCceEEEccCChhhH--Hhh------
Q 017914 56 WQSPNRMLILG-MG-FVGRIFAEKIKNQGWVVSGTCTNVMKKKELE-------QSGFDVHLFNANETAL--MIL------ 118 (364)
Q Consensus 56 ~~~~~~vlVtG-tG-~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~-------~~~~~~~~~D~~~~~~--~~~------ 118 (364)
...+++||||| +| .||++++++|+++|++|++++|+.++...+. ..++.++.+|++|.+. ..+
T Consensus 19 ~l~~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 98 (266)
T 3o38_A 19 LLKGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLGLGRVEAVVCDVTSTEAVDALITQTVEK 98 (266)
T ss_dssp TTTTCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCSSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCCceEEEEeCCCCHHHHHHHHHHHHHH
Confidence 35578999999 78 5999999999999999999999876644322 1468899999999764 222
Q ss_pred -ccCceeeEEEEecCCCCCCCCh----hhhHHHH------HHHHh----hcC-CccEEEEEccceeecCCCCccccCCCC
Q 017914 119 -TTLKNYTHLLVSIPPLEGTGDP----MLKHGEL------LRSTL----MNG-HLQWLGYLSSTGVYGHSGGAWVDEDYP 182 (364)
Q Consensus 119 -~~~d~v~~~~~~~~~~~~~~~~----~~~~~~~------l~~a~----~~~-~~~r~v~~Ss~~vy~~~~~~~~~E~~~ 182 (364)
..+|+++|+++........... ......| +..++ ++. +..++|++||...+..
T Consensus 99 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~----------- 167 (266)
T 3o38_A 99 AGRLDVLVNNAGLGGQTPVVDMTDEEWDRVLNVTLTSVMRATRAALRYFRGVDHGGVIVNNASVLGWRA----------- 167 (266)
T ss_dssp HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSCCEEEEEECCGGGTCC-----------
T ss_pred hCCCcEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeCCHHHcCC-----------
Confidence 3679999999864432211111 1111222 22222 222 5578999998764421
Q ss_pred CCCCChhHHHHHHHHHHHHHhhhh---cCCcEEEEEecceecCCCChHHHHHHhcCcccccccccCCcccccccHHHHHH
Q 017914 183 ANPTTELGRLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRSSVDTIIKQLPLSEGQKMRRARQYTSRIHVDDICQ 259 (364)
Q Consensus 183 ~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~ 259 (364)
..+...|+.+|.+.+.+++.++.+ .|+++++++||.+..+..... ...... ...........+.+++|+|+
T Consensus 168 ~~~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~---~~~~~~---~~~~~~~~~~r~~~~~dva~ 241 (266)
T 3o38_A 168 QHSQSHYAAAKAGVMALTRCSAIEAVEFGVRINAVSPSIARHKFLEKT---SSSELL---DRLASDEAFGRAAEPWEVAA 241 (266)
T ss_dssp CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC-----------------------CCTTSSCCCHHHHHH
T ss_pred CCCCchHHHHHHHHHHHHHHHHHHHHHcCcEEEEEeCCcccchhhhcc---CcHHHH---HHHHhcCCcCCCCCHHHHHH
Confidence 224578999999999999988755 589999999999887642111 000000 00111122345688999999
Q ss_pred HHHHHccCC---CCCceEEEeCCC
Q 017914 260 VLSASIDKP---SAWNVYNVVDDD 280 (364)
Q Consensus 260 ~~~~~l~~~---~~g~~~~i~~~~ 280 (364)
+++.++... -.|+++++.+|.
T Consensus 242 ~i~~l~s~~~~~~tG~~i~vdgG~ 265 (266)
T 3o38_A 242 TIAFLASDYSSYMTGEVVSVSSQR 265 (266)
T ss_dssp HHHHHHSGGGTTCCSCEEEESSCC
T ss_pred HHHHHcCccccCccCCEEEEcCCc
Confidence 999998764 348999998874
|
| >3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.76 E-value=1.5e-17 Score=145.48 Aligned_cols=213 Identities=10% Similarity=0.038 Sum_probs=141.1
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhh--------hCCceEEEccCChhhH--Hhh---ccCc
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELE--------QSGFDVHLFNANETAL--MIL---TTLK 122 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~--------~~~~~~~~~D~~~~~~--~~~---~~~d 122 (364)
..+++||||| +|+||++++++|+++|++|++++|+.+...... ...+..+.+|+++.+. ..+ ..+|
T Consensus 8 l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~g~id 87 (267)
T 3t4x_A 8 LKGKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVVADLGTEQGCQDVIEKYPKVD 87 (267)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTSHHHHHHHHHHCCCCS
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCCHHHHHHHHHhcCCCC
Confidence 4468999999 999999999999999999999999876644321 1346788899999764 333 4789
Q ss_pred eeeEEEEecCCCCCCCChhhh----HHHH----------HHHHhhcCCccEEEEEccceeecCCCCccccCCCCCCCCCh
Q 017914 123 NYTHLLVSIPPLEGTGDPMLK----HGEL----------LRSTLMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANPTTE 188 (364)
Q Consensus 123 ~v~~~~~~~~~~~~~~~~~~~----~~~~----------l~~a~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~ 188 (364)
+++|+++.............. ...| ++..+++.+..++|++||...+.. ..+...
T Consensus 88 ~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-----------~~~~~~ 156 (267)
T 3t4x_A 88 ILINNLGIFEPVEYFDIPDEDWFKLFEVNIMSGVRLTRSYLKKMIERKEGRVIFIASEAAIMP-----------SQEMAH 156 (267)
T ss_dssp EEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTEEEEEEECCGGGTSC-----------CTTCHH
T ss_pred EEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEEcchhhccC-----------CCcchH
Confidence 999998865433211111111 2222 233333556779999999765422 224478
Q ss_pred hHHHHHHHHHHHHHhhhhc---CCcEEEEEecceecCCCChHHHHHHhcCccccc-----------ccccCCcccccccH
Q 017914 189 LGRLRLSAEKGWLNLGRDL---GISAQVFRLGGIYGPGRSSVDTIIKQLPLSEGQ-----------KMRRARQYTSRIHV 254 (364)
Q Consensus 189 Y~~sK~~~E~~~~~~~~~~---~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~i~v 254 (364)
|+.+|...+.+.+.++.+. |++++.++||.+..+. ...+.......... ..........+.++
T Consensus 157 Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~p 233 (267)
T 3t4x_A 157 YSATKTMQLSLSRSLAELTTGTNVTVNTIMPGSTLTEG---VETMLNSLYPNEQLTIEEAEKRFMKENRPTSIIQRLIRP 233 (267)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTSEEEEEEEEECCBCCHH---HHHHHHHSSTTSCCCHHHHHHHHHHHHCTTCSSCSCBCT
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCeecCcc---HHHHHhhcCcccCCCHHHHHHHHhhccCCcccccCccCH
Confidence 9999999999999887654 6899999999887642 11111110000000 00000112456889
Q ss_pred HHHHHHHHHHccCC---CCCceEEEeCCCCCC
Q 017914 255 DDICQVLSASIDKP---SAWNVYNVVDDDPAP 283 (364)
Q Consensus 255 ~Dva~~~~~~l~~~---~~g~~~~i~~~~~~s 283 (364)
+|+|++++.++... -.|+++++.+|...+
T Consensus 234 edvA~~v~fL~s~~~~~itG~~i~vdGG~~~s 265 (267)
T 3t4x_A 234 EEIAHLVTFLSSPLSSAINGSALRIDGGLVRS 265 (267)
T ss_dssp HHHHHHHHHHHSGGGTTCCSCEEEESTTCSCS
T ss_pred HHHHHHHHHHcCccccCccCCeEEECCCcccc
Confidence 99999999988754 348999999886554
|
| >3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A* | Back alignment and structure |
|---|
Probab=99.76 E-value=1.3e-17 Score=143.99 Aligned_cols=203 Identities=10% Similarity=0.021 Sum_probs=137.6
Q ss_pred CCCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhh---hCCceEEEccCChhhH--Hhh-------ccCc
Q 017914 56 WQSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELE---QSGFDVHLFNANETAL--MIL-------TTLK 122 (364)
Q Consensus 56 ~~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~---~~~~~~~~~D~~~~~~--~~~-------~~~d 122 (364)
...+++||||| +|+||++++++|+++|++|++++|+.+....+. ..++.++.+|++|.+. ..+ ..+|
T Consensus 3 ~l~gk~vlVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id 82 (247)
T 3rwb_A 3 RLAGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASIGKKARAIAADISDPGSVKALFAEIQALTGGID 82 (247)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCTTEEECCCCTTCHHHHHHHHHHHHHHHSCCS
T ss_pred CcCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHCCCCC
Confidence 35678999999 999999999999999999999999877655432 2467889999999764 222 3689
Q ss_pred eeeEEEEecCCCCCCC----ChhhhHHHH------HHHH----hhcCC-ccEEEEEccceeecCCCCccccCCCCCCCCC
Q 017914 123 NYTHLLVSIPPLEGTG----DPMLKHGEL------LRST----LMNGH-LQWLGYLSSTGVYGHSGGAWVDEDYPANPTT 187 (364)
Q Consensus 123 ~v~~~~~~~~~~~~~~----~~~~~~~~~------l~~a----~~~~~-~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~ 187 (364)
+++|+++......... +.......| +..+ +++.+ ..++|++||...+.... ...
T Consensus 83 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~-----------~~~ 151 (247)
T 3rwb_A 83 ILVNNASIVPFVAWDDVDLDHWRKIIDVNLTGTFIVTRAGTDQMRAAGKAGRVISIASNTFFAGTP-----------NMA 151 (247)
T ss_dssp EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHHTCT-----------TCH
T ss_pred EEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCcEEEEECchhhccCCC-----------Cch
Confidence 9999998654322111 111111222 2222 33333 57999999976553221 346
Q ss_pred hhHHHHHHHHHHHHHhhhh---cCCcEEEEEecceecCCCC-----hHHHHHHhcCcccccccccCCcccccccHHHHHH
Q 017914 188 ELGRLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRS-----SVDTIIKQLPLSEGQKMRRARQYTSRIHVDDICQ 259 (364)
Q Consensus 188 ~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~ 259 (364)
.|+.+|...+.+.+.++.+ .|++++.++||.+..+... ....+... ......+...+|+|+
T Consensus 152 ~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~-----------~~~~~r~~~pedva~ 220 (247)
T 3rwb_A 152 AYVAAKGGVIGFTRALATELGKYNITANAVTPGLIESDGVKASPHNEAFGFVEM-----------LQAMKGKGQPEHIAD 220 (247)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSGGGGGHHHHHH-----------HSSSCSCBCHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCccccccChhHHHHHHhc-----------ccccCCCcCHHHHHH
Confidence 8999999999999888755 5899999999998764210 00001110 011123467999999
Q ss_pred HHHHHccCCC---CCceEEEeCCC
Q 017914 260 VLSASIDKPS---AWNVYNVVDDD 280 (364)
Q Consensus 260 ~~~~~l~~~~---~g~~~~i~~~~ 280 (364)
+++.++.... .|+++++.+|.
T Consensus 221 ~v~~L~s~~~~~itG~~i~vdGG~ 244 (247)
T 3rwb_A 221 VVSFLASDDARWITGQTLNVDAGM 244 (247)
T ss_dssp HHHHHHSGGGTTCCSCEEEESTTS
T ss_pred HHHHHhCccccCCCCCEEEECCCc
Confidence 9999987652 48999998774
|
| >3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=99.76 E-value=1.8e-17 Score=143.02 Aligned_cols=196 Identities=13% Similarity=0.076 Sum_probs=121.3
Q ss_pred CCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhh-CCceEEEccCChhhH-----Hh---hccCceeeEE
Q 017914 58 SPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQ-SGFDVHLFNANETAL-----MI---LTTLKNYTHL 127 (364)
Q Consensus 58 ~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~-~~~~~~~~D~~~~~~-----~~---~~~~d~v~~~ 127 (364)
.+++||||| +|+||++++++|.+ |+.|++++|+.+....+.+ .++.++.+|+++.+. .. +..+|+++|+
T Consensus 4 ~~k~vlITGas~gIG~~~a~~l~~-g~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~id~lv~~ 82 (245)
T 3e9n_A 4 KKKIAVVTGATGGMGIEIVKDLSR-DHIVYALGRNPEHLAALAEIEGVEPIESDIVKEVLEEGGVDKLKNLDHVDTLVHA 82 (245)
T ss_dssp --CEEEEESTTSHHHHHHHHHHTT-TSEEEEEESCHHHHHHHHTSTTEEEEECCHHHHHHTSSSCGGGTTCSCCSEEEEC
T ss_pred CCCEEEEEcCCCHHHHHHHHHHhC-CCeEEEEeCCHHHHHHHHhhcCCcceecccchHHHHHHHHHHHHhcCCCCEEEEC
Confidence 468999999 99999999999988 9999999998877655433 467889999998643 22 2368999999
Q ss_pred EEecCCCCCCCChh----hhHHHHH------HH----HhhcCCccEEEEEccceeecCCCCccccCCCCCCCCChhHHHH
Q 017914 128 LVSIPPLEGTGDPM----LKHGELL------RS----TLMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANPTTELGRLR 193 (364)
Q Consensus 128 ~~~~~~~~~~~~~~----~~~~~~l------~~----a~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~~sK 193 (364)
++............ .....|+ .. .+++.+ .++|++||...+... .....|+.+|
T Consensus 83 Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-g~iv~isS~~~~~~~-----------~~~~~Y~asK 150 (245)
T 3e9n_A 83 AAVARDTTIEAGSVAEWHAHLDLNVIVPAELSRQLLPALRAAS-GCVIYINSGAGNGPH-----------PGNTIYAASK 150 (245)
T ss_dssp C----------CHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEC---------------------CHHHHHHH
T ss_pred CCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-CeEEEEcCcccccCC-----------CCchHHHHHH
Confidence 98654322111111 1112222 22 222333 689999997765432 1346899999
Q ss_pred HHHHHHHHHhhhh---cCCcEEEEEecceecCCCChHHHHHHhcCcccccccccCCcccccccHHHHHHHHHHHccCCCC
Q 017914 194 LSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRSSVDTIIKQLPLSEGQKMRRARQYTSRIHVDDICQVLSASIDKPSA 270 (364)
Q Consensus 194 ~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~~ 270 (364)
.+.|.+++.++.+ .|+++++++||.+.++....+ .... ........+++++|+|++++.+++.+..
T Consensus 151 ~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~---~~~~--------~~~~~~~~~~~p~dvA~~i~~l~~~~~~ 219 (245)
T 3e9n_A 151 HALRGLADAFRKEEANNGIRVSTVSPGPTNTPMLQGL---MDSQ--------GTNFRPEIYIEPKEIANAIRFVIDAGET 219 (245)
T ss_dssp HHHHHHHHHHHHHHGGGTCEEEEEEECCC---------------------------CCGGGSCHHHHHHHHHHHHTSCTT
T ss_pred HHHHHHHHHHHHHhhhcCeEEEEEecCCccCchhhhh---hhhh--------hcccccccCCCHHHHHHHHHHHHcCCCc
Confidence 9999999988754 589999999999987642111 1100 0011123468999999999999999888
Q ss_pred CceEEEe
Q 017914 271 WNVYNVV 277 (364)
Q Consensus 271 g~~~~i~ 277 (364)
+++||+.
T Consensus 220 ~~~~~i~ 226 (245)
T 3e9n_A 220 TQITNVD 226 (245)
T ss_dssp EEEEEEE
T ss_pred cceeeeE
Confidence 8888874
|
| >3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans} | Back alignment and structure |
|---|
Probab=99.76 E-value=6.3e-18 Score=147.01 Aligned_cols=209 Identities=11% Similarity=-0.047 Sum_probs=133.3
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCChhhH--Hhh------ccCceeeEE
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETAL--MIL------TTLKNYTHL 127 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~--~~~------~~~d~v~~~ 127 (364)
..+++||||| +|+||++++++|+++|++|++++|+.+.........+.++.+|++|.+. ..+ ..+|+++|+
T Consensus 7 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~g~id~lv~n 86 (257)
T 3tl3_A 7 IRDAVAVVTGGASGLGLATTKRLLDAGAQVVVLDIRGEDVVADLGDRARFAAADVTDEAAVASALDLAETMGTLRIVVNC 86 (257)
T ss_dssp ---CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCHHHHHHTCTTEEEEECCTTCHHHHHHHHHHHHHHSCEEEEEEC
T ss_pred ecCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCchHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhCCCCEEEEC
Confidence 4568999999 9999999999999999999999996654333223568899999999764 222 368888888
Q ss_pred EEecCCC--------CCCCChhhhHHHHHHHH------h----hc--------CCccEEEEEccceeecCCCCccccCCC
Q 017914 128 LVSIPPL--------EGTGDPMLKHGELLRST------L----MN--------GHLQWLGYLSSTGVYGHSGGAWVDEDY 181 (364)
Q Consensus 128 ~~~~~~~--------~~~~~~~~~~~~~l~~a------~----~~--------~~~~r~v~~Ss~~vy~~~~~~~~~E~~ 181 (364)
++..... ....+.......|+... + .+ .+..++|++||...+....
T Consensus 87 Ag~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~-------- 158 (257)
T 3tl3_A 87 AGTGNAIRVLSRDGVFSLAAFRKIVDINLVGSFNVLRLAAERIAKTEPVGPNAEERGVIINTASVAAFDGQI-------- 158 (257)
T ss_dssp GGGSHHHHHHHHTCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCC--CCCCSEEEEEECCCC--CCHH--------
T ss_pred CCCCCCcccccccccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccccccCCCcEEEEEcchhhcCCCC--------
Confidence 8743211 01111112222333322 2 12 3456899999976542211
Q ss_pred CCCCCChhHHHHHHHHHHHHHhhhh---cCCcEEEEEecceecCCCChH-HHHHHhcCcccccccccCCcccccccHHHH
Q 017914 182 PANPTTELGRLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRSSV-DTIIKQLPLSEGQKMRRARQYTSRIHVDDI 257 (364)
Q Consensus 182 ~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dv 257 (364)
+...|+.+|...+.+.+.++.+ .|++++.++||.+..+....+ ....... ..... ....+.+++|+
T Consensus 159 ---~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~--~~~~~-----~~~r~~~p~dv 228 (257)
T 3tl3_A 159 ---GQAAYSASKGGVVGMTLPIARDLASHRIRVMTIAPGLFDTPLLASLPEEARASL--GKQVP-----HPSRLGNPDEY 228 (257)
T ss_dssp ---HHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTC---CHHHHHHH--HHTSS-----SSCSCBCHHHH
T ss_pred ---CCccHHHHHHHHHHHHHHHHHHhcccCcEEEEEEecCccChhhhhccHHHHHHH--HhcCC-----CCCCccCHHHH
Confidence 2357999999999999888654 489999999999987653211 1111110 00000 00235789999
Q ss_pred HHHHHHHccCC-CCCceEEEeCCCCCC
Q 017914 258 CQVLSASIDKP-SAWNVYNVVDDDPAP 283 (364)
Q Consensus 258 a~~~~~~l~~~-~~g~~~~i~~~~~~s 283 (364)
|++++.+++.+ -.|+++++.+|..++
T Consensus 229 a~~v~~l~s~~~itG~~i~vdGG~~~~ 255 (257)
T 3tl3_A 229 GALAVHIIENPMLNGEVIRLDGAIRMA 255 (257)
T ss_dssp HHHHHHHHHCTTCCSCEEEESTTC---
T ss_pred HHHHHHHhcCCCCCCCEEEECCCccCC
Confidence 99999999875 348999998886544
|
| >3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=99.75 E-value=6.5e-17 Score=143.67 Aligned_cols=213 Identities=11% Similarity=-0.054 Sum_probs=137.4
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCc------------hhhhh----hh--hCCceEEEccCChhhH--
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNV------------MKKKE----LE--QSGFDVHLFNANETAL-- 115 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~------------~~~~~----l~--~~~~~~~~~D~~~~~~-- 115 (364)
..++++|||| +|+||+++++.|+++|++|++++|+. +.... +. ...+.++.+|++|.+.
T Consensus 26 l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~ 105 (299)
T 3t7c_A 26 VEGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRRIIASQVDVRDFDAMQ 105 (299)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHH
T ss_pred cCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHH
Confidence 4568999999 99999999999999999999999872 22221 11 1457889999999763
Q ss_pred Hhh-------ccCceeeEEEEecCCCCCCCC-----hhhhHHHHH------HHHh----hc-CCccEEEEEccceeecCC
Q 017914 116 MIL-------TTLKNYTHLLVSIPPLEGTGD-----PMLKHGELL------RSTL----MN-GHLQWLGYLSSTGVYGHS 172 (364)
Q Consensus 116 ~~~-------~~~d~v~~~~~~~~~~~~~~~-----~~~~~~~~l------~~a~----~~-~~~~r~v~~Ss~~vy~~~ 172 (364)
..+ ..+|+++|+++.........+ .......|+ ..++ .+ .+..++|++||...+...
T Consensus 106 ~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~Iv~isS~~~~~~~ 185 (299)
T 3t7c_A 106 AAVDDGVTQLGRLDIVLANAALASEGTRLNRMDPKTWRDMIDVNLNGAWITARVAIPHIMAGKRGGSIVFTSSIGGLRGA 185 (299)
T ss_dssp HHHHHHHHHHSCCCEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTSCEEEEEECCGGGTSCC
T ss_pred HHHHHHHHHhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhccCC
Confidence 222 368999999986544321111 111222232 2221 22 235689999997654221
Q ss_pred CCccccCCCCCCCCChhHHHHHHHHHHHHHhhhhc---CCcEEEEEecceecCCCChHHHHHHhcC-ccccc--c-----
Q 017914 173 GGAWVDEDYPANPTTELGRLRLSAEKGWLNLGRDL---GISAQVFRLGGIYGPGRSSVDTIIKQLP-LSEGQ--K----- 241 (364)
Q Consensus 173 ~~~~~~E~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilRp~~v~g~~~~~~~~~~~~~~-~~~~~--~----- 241 (364)
.....|+.+|...+.+.+.++.+. |++++.|+||.+..+............. ..... .
T Consensus 186 -----------~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (299)
T 3t7c_A 186 -----------ENIGNYIASKHGLHGLMRTMALELGPRNIRVNIVCPSSVATPMLLNEPTYRMFRPDLENPTVEDFQVAS 254 (299)
T ss_dssp -----------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTTSSHHHHHHHCTTSSSCCHHHHHHHH
T ss_pred -----------CCcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCCccCccccccchhhhhhhhhccchhhHHHHHh
Confidence 234689999999999998887554 8999999999998875322111100000 00000 0
Q ss_pred -cccCCcccccccHHHHHHHHHHHccCC---CCCceEEEeCCCC
Q 017914 242 -MRRARQYTSRIHVDDICQVLSASIDKP---SAWNVYNVVDDDP 281 (364)
Q Consensus 242 -~~~~~~~~~~i~v~Dva~~~~~~l~~~---~~g~~~~i~~~~~ 281 (364)
... .....+..++|+|++++.++... -.|+++++.+|..
T Consensus 255 ~~~~-~~p~r~~~pedvA~~v~fL~s~~a~~itG~~i~vdGG~~ 297 (299)
T 3t7c_A 255 RQMH-VLPIPYVEPADISNAILFLVSDDARYITGVSLPVDGGAL 297 (299)
T ss_dssp HHHS-SSSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred hhhc-ccCcCCCCHHHHHHHHHHHhCcccccCcCCEEeeCCCcc
Confidence 000 01134678999999999999765 3489999988753
|
| >1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A* | Back alignment and structure |
|---|
Probab=99.75 E-value=1.8e-17 Score=144.83 Aligned_cols=207 Identities=14% Similarity=0.092 Sum_probs=134.4
Q ss_pred CCCCeEEEEc-C--ChhhHHHHHHHHhCCCEEEEEEeCch---hhhhhhh--CCceEEEccCChhhH--Hhh-------c
Q 017914 57 QSPNRMLILG-M--GFVGRIFAEKIKNQGWVVSGTCTNVM---KKKELEQ--SGFDVHLFNANETAL--MIL-------T 119 (364)
Q Consensus 57 ~~~~~vlVtG-t--G~iG~~l~~~L~~~g~~V~~~~r~~~---~~~~l~~--~~~~~~~~D~~~~~~--~~~-------~ 119 (364)
..+++||||| + |+||++++++|+++|++|++++|+.. ....+.. ....++.+|++|.+. ..+ .
T Consensus 7 l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 86 (265)
T 1qsg_A 7 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVWP 86 (265)
T ss_dssp TTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTTCS
T ss_pred cCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEcCcHHHHHHHHHHHHhcCCcEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 3457899998 8 99999999999999999999999862 2222221 245788999999763 222 2
Q ss_pred cCceeeEEEEecCCC---CC------CCChhhhHHH------HHHHHhhcC--CccEEEEEccceeecCCCCccccCCCC
Q 017914 120 TLKNYTHLLVSIPPL---EG------TGDPMLKHGE------LLRSTLMNG--HLQWLGYLSSTGVYGHSGGAWVDEDYP 182 (364)
Q Consensus 120 ~~d~v~~~~~~~~~~---~~------~~~~~~~~~~------~l~~a~~~~--~~~r~v~~Ss~~vy~~~~~~~~~E~~~ 182 (364)
.+|+++|+++..... .. ..+....... ++..++... ...++|++||...+..
T Consensus 87 ~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~----------- 155 (265)
T 1qsg_A 87 KFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERA----------- 155 (265)
T ss_dssp SEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSB-----------
T ss_pred CCCEEEECCCCCCccccCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEcchhhccC-----------
Confidence 579999998754320 10 0111111222 333333321 1258999999765421
Q ss_pred CCCCChhHHHHHHHHHHHHHhhhhc---CCcEEEEEecceecCCCCh---HHHHHHhcCcccccccccCCcccccccHHH
Q 017914 183 ANPTTELGRLRLSAEKGWLNLGRDL---GISAQVFRLGGIYGPGRSS---VDTIIKQLPLSEGQKMRRARQYTSRIHVDD 256 (364)
Q Consensus 183 ~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilRp~~v~g~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D 256 (364)
..+...|+.+|...+.+.+.++.+. |+++++++||.+.++.... ...+... +.... ....+.+++|
T Consensus 156 ~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~--~~~~~------p~~~~~~~~d 227 (265)
T 1qsg_A 156 IPNYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAH--CEAVT------PIRRTVTIED 227 (265)
T ss_dssp CTTTTHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGGGSTTHHHHHHH--HHHHS------TTSSCCCHHH
T ss_pred CCCchHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCCccchhhcccccHHHHHH--HHhcC------CCCCCCCHHH
Confidence 1134689999999999999887654 8999999999998875321 1111111 00000 0123578999
Q ss_pred HHHHHHHHccCCC---CCceEEEeCCCCC
Q 017914 257 ICQVLSASIDKPS---AWNVYNVVDDDPA 282 (364)
Q Consensus 257 va~~~~~~l~~~~---~g~~~~i~~~~~~ 282 (364)
+|++++.++.... .|+.|++.+|..+
T Consensus 228 va~~v~~l~s~~~~~~tG~~~~vdgG~~~ 256 (265)
T 1qsg_A 228 VGNSAAFLCSDLSAGISGEVVHVDGGFSI 256 (265)
T ss_dssp HHHHHHHHTSGGGTTCCSCEEEESTTGGG
T ss_pred HHHHHHHHhCchhcCccCCEEEECCCcCC
Confidence 9999999987542 4889999887543
|
| >3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A | Back alignment and structure |
|---|
Probab=99.75 E-value=3.1e-17 Score=142.09 Aligned_cols=204 Identities=11% Similarity=0.018 Sum_probs=135.4
Q ss_pred CCCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhh-------CCceEEEccC--ChhhH--Hhh-----
Q 017914 56 WQSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQ-------SGFDVHLFNA--NETAL--MIL----- 118 (364)
Q Consensus 56 ~~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~-------~~~~~~~~D~--~~~~~--~~~----- 118 (364)
...+++||||| +|+||+++++.|+++|++|++++|+.++...+.. ..+.++.+|+ +|.+. ..+
T Consensus 9 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 88 (252)
T 3f1l_A 9 LLNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFILDLLTCTSENCQQLAQRIAV 88 (252)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSCCCEEEECCTTTCCHHHHHHHHHHHHH
T ss_pred ccCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCCceEEEEecccCCHHHHHHHHHHHHH
Confidence 35678999999 9999999999999999999999998776544321 2678999999 76543 222
Q ss_pred --ccCceeeEEEEecCCCCCCCC-h----hhhHHHH------HHHHh----hcCCccEEEEEccceeecCCCCccccCCC
Q 017914 119 --TTLKNYTHLLVSIPPLEGTGD-P----MLKHGEL------LRSTL----MNGHLQWLGYLSSTGVYGHSGGAWVDEDY 181 (364)
Q Consensus 119 --~~~d~v~~~~~~~~~~~~~~~-~----~~~~~~~------l~~a~----~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~ 181 (364)
..+|+++|+++.........+ . ......| +.+++ ++.+..++|++||...+..
T Consensus 89 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~---------- 158 (252)
T 3f1l_A 89 NYPRLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQVNVNATFMLTQALLPLLLKSDAGSLVFTSSSVGRQG---------- 158 (252)
T ss_dssp HCSCCSEEEECCCCCCCCSCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGTSC----------
T ss_pred hCCCCCEEEECCccCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHCCCCEEEEECChhhccC----------
Confidence 368999999986433221111 1 1111222 22222 4556679999998764421
Q ss_pred CCCCCChhHHHHHHHHHHHHHhhhhcC--CcEEEEEecceecCCCChHHHHHHhcCcccccccccCCcccccccHHHHHH
Q 017914 182 PANPTTELGRLRLSAEKGWLNLGRDLG--ISAQVFRLGGIYGPGRSSVDTIIKQLPLSEGQKMRRARQYTSRIHVDDICQ 259 (364)
Q Consensus 182 ~~~~~~~Y~~sK~~~E~~~~~~~~~~~--~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~ 259 (364)
......|+.+|...+.+.+.++.+.+ ++++.+.||.+..+. ... ... . .....+...+|+|+
T Consensus 159 -~~~~~~Y~asK~a~~~l~~~la~e~~~~irvn~v~PG~v~t~~---~~~---~~~--~-------~~~~~~~~p~dva~ 222 (252)
T 3f1l_A 159 -RANWGAYAASKFATEGMMQVLADEYQQRLRVNCINPGGTRTAM---RAS---AFP--T-------EDPQKLKTPADIMP 222 (252)
T ss_dssp -CTTCHHHHHHHHHHHHHHHHHHHHTTTTCEEEEEECCSBSSHH---HHH---HCT--T-------CCGGGSBCTGGGHH
T ss_pred -CCCCchhHHHHHHHHHHHHHHHHHhcCCcEEEEEecCcccCch---hhh---hCC--c-------cchhccCCHHHHHH
Confidence 12346899999999999998876653 889999999875421 111 100 0 01123577899999
Q ss_pred HHHHHccCC---CCCceEEEeCCCCCCHH
Q 017914 260 VLSASIDKP---SAWNVYNVVDDDPAPRE 285 (364)
Q Consensus 260 ~~~~~l~~~---~~g~~~~i~~~~~~s~~ 285 (364)
+++.++... -.|+.+++.+|...++.
T Consensus 223 ~~~~L~s~~~~~itG~~i~vdgG~~~~~~ 251 (252)
T 3f1l_A 223 LYLWLMGDDSRRKTGMTFDAQPGRKPGIS 251 (252)
T ss_dssp HHHHHHSGGGTTCCSCEEESSCC------
T ss_pred HHHHHcCccccCCCCCEEEeCCCcCCCCC
Confidence 999998765 34899999998766654
|
| >3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.75 E-value=3.4e-17 Score=146.90 Aligned_cols=221 Identities=12% Similarity=0.086 Sum_probs=132.1
Q ss_pred CCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCc-----hhhhhhh------hCCceEEEccCChhhH--Hhh-----
Q 017914 58 SPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNV-----MKKKELE------QSGFDVHLFNANETAL--MIL----- 118 (364)
Q Consensus 58 ~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~-----~~~~~l~------~~~~~~~~~D~~~~~~--~~~----- 118 (364)
.+++||||| +|+||++++++|+++|++|++.+|+. +..+.+. ..++.++.+|++|.+. ..+
T Consensus 4 ~~k~vlVTGas~GIG~aia~~L~~~G~~V~~~~r~~~~r~~~~~~~l~~~~~~~~~~~~~~~~Dvtd~~~v~~~~~~~~~ 83 (324)
T 3u9l_A 4 SKKIILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDNDVDLRTLELDVQSQVSVDRAIDQIIG 83 (324)
T ss_dssp -CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCTTTTTHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEecCcccccCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Confidence 357899999 99999999999999999999999863 1112221 1468899999999764 333
Q ss_pred --ccCceeeEEEEecCCCCCCC----ChhhhHH------HHHHHHh----hcCCccEEEEEccceeecCCCCccccCCCC
Q 017914 119 --TTLKNYTHLLVSIPPLEGTG----DPMLKHG------ELLRSTL----MNGHLQWLGYLSSTGVYGHSGGAWVDEDYP 182 (364)
Q Consensus 119 --~~~d~v~~~~~~~~~~~~~~----~~~~~~~------~~l~~a~----~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~ 182 (364)
..+|+++|+++......... +...... .++..++ ++.+.+++|++||...+....
T Consensus 84 ~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~a~lp~m~~~~~g~iV~isS~~~~~~~~--------- 154 (324)
T 3u9l_A 84 EDGRIDVLIHNAGHMVFGPAEAFTPEQFAELYDINVLSTQRVNRAALPHMRRQKHGLLIWISSSSSAGGTP--------- 154 (324)
T ss_dssp HHSCCSEEEECCCCCBCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCC---------
T ss_pred HcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEecchhccCCC---------
Confidence 37899999998543221111 1111112 2333333 455678999999976542111
Q ss_pred CCCCChhHHHHHHHHHHHHHhhhh---cCCcEEEEEecceecCCCCh--------HHHHHHhcCccc---ccccccC--C
Q 017914 183 ANPTTELGRLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRSS--------VDTIIKQLPLSE---GQKMRRA--R 246 (364)
Q Consensus 183 ~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~--------~~~~~~~~~~~~---~~~~~~~--~ 246 (364)
.....|+.+|.+.|.+.+.++.+ .|+++++|+||.+.++...+ ............ ...+... .
T Consensus 155 -~~~~~Y~asKaa~~~~~~~la~el~~~gI~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (324)
T 3u9l_A 155 -PYLAPYFAAKAAMDAIAVQYARELSRWGIETSIIVPGAFTSGTNHFAHSGVPDDHARQAEYEAGPNAGLGEEIKKAFAA 233 (324)
T ss_dssp -SSCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCC---------CBCCSCHHHHHHHHHTTTTTHHHHHHHHHHH
T ss_pred -CcchhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEECCccccCchhhcccCCchHHHHHHhhccccccCCHHHHHHHHHH
Confidence 12357999999999999988765 58999999999997543211 111111000000 0000000 0
Q ss_pred cccccccHHHHHHHHHHHccCCCC-CceEEEeCCCCCCHHHHH
Q 017914 247 QYTSRIHVDDICQVLSASIDKPSA-WNVYNVVDDDPAPREEVF 288 (364)
Q Consensus 247 ~~~~~i~v~Dva~~~~~~l~~~~~-g~~~~i~~~~~~s~~el~ 288 (364)
...+..+++|+|++++.++..+.. .....+.++....+..+.
T Consensus 234 l~~~~~~p~~vA~aiv~~~~~~~~~~~~~~~~gp~~~~~~~~~ 276 (324)
T 3u9l_A 234 IVPPDADVSLVADAIVRVVGTASGKRPFRVHVDPAEDGADVGF 276 (324)
T ss_dssp TSCTTCCTHHHHHHHHHHHTSCTTCCCSEEEECTTCCSHHHHH
T ss_pred hcCCCCCHHHHHHHHHHHhcCCCCCCCeEEEeCCcchHHHHHH
Confidence 001125789999999999988742 223334455555644433
|
| >3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5} | Back alignment and structure |
|---|
Probab=99.75 E-value=5.6e-17 Score=141.37 Aligned_cols=189 Identities=11% Similarity=-0.008 Sum_probs=125.8
Q ss_pred CCCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhh------CCceEEEccCChhhH--Hhh-------c
Q 017914 56 WQSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQ------SGFDVHLFNANETAL--MIL-------T 119 (364)
Q Consensus 56 ~~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~------~~~~~~~~D~~~~~~--~~~-------~ 119 (364)
...+++||||| +|+||++++++|+++|++|++++|+.++...+.. ..+.++.+|++|.+. ..+ .
T Consensus 26 ~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 105 (262)
T 3rkr_A 26 SLSGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAGGEAESHACDLSHSDAIAAFATGVLAAHG 105 (262)
T ss_dssp TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHhcC
Confidence 45568999999 9999999999999999999999998876544321 357889999999763 222 3
Q ss_pred cCceeeEEEEecCCCCCCCC-----hhhhHHHH------HHHH----hhcCCccEEEEEccceeecCCCCccccCCCCCC
Q 017914 120 TLKNYTHLLVSIPPLEGTGD-----PMLKHGEL------LRST----LMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPAN 184 (364)
Q Consensus 120 ~~d~v~~~~~~~~~~~~~~~-----~~~~~~~~------l~~a----~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~ 184 (364)
.+|+++|+++.........+ .......| +..+ +++.+..+||++||...+.. ..
T Consensus 106 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~-----------~~ 174 (262)
T 3rkr_A 106 RCDVLVNNAGVGWFGGPLHTMKPAEWDALIAVNLKAPYLLLRAFAPAMIAAKRGHIINISSLAGKNP-----------VA 174 (262)
T ss_dssp CCSEEEECCCCCCCSSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCEEEEECSSCSSCC-----------CT
T ss_pred CCCEEEECCCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCceEEEEechhhcCC-----------CC
Confidence 58999999986332221111 11111222 2222 33456679999999765422 22
Q ss_pred CCChhHHHHHHHHHHHHHhhhh---cCCcEEEEEecceecCCCChHHHHHHhcCcccccccccCCcccccccHHHHHHHH
Q 017914 185 PTTELGRLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRSSVDTIIKQLPLSEGQKMRRARQYTSRIHVDDICQVL 261 (364)
Q Consensus 185 ~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~ 261 (364)
+...|+.+|...+.+++.++.+ .|+++++++||.+..+..... .. ......++..+|+|+++
T Consensus 175 ~~~~Y~asKaa~~~l~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~---~~------------~~~~~~~~~p~dvA~~v 239 (262)
T 3rkr_A 175 DGAAYTASKWGLNGLMTSAAEELRQHQVRVSLVAPGSVRTEFGVGL---SA------------KKSALGAIEPDDIADVV 239 (262)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC-------------------------------CCCHHHHHHHH
T ss_pred CCchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCCCcCCccccc---cc------------ccccccCCCHHHHHHHH
Confidence 4468999999999999888754 589999999999866432110 00 01123357899999999
Q ss_pred HHHccCCCC
Q 017914 262 SASIDKPSA 270 (364)
Q Consensus 262 ~~~l~~~~~ 270 (364)
+.++.....
T Consensus 240 ~~l~s~~~~ 248 (262)
T 3rkr_A 240 ALLATQADQ 248 (262)
T ss_dssp HHHHTCCTT
T ss_pred HHHhcCccc
Confidence 999987644
|
| >3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.75 E-value=3.8e-17 Score=142.30 Aligned_cols=205 Identities=8% Similarity=0.039 Sum_probs=129.1
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhh----h--CCceEEEccCChhhH--Hh-------hcc
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELE----Q--SGFDVHLFNANETAL--MI-------LTT 120 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~----~--~~~~~~~~D~~~~~~--~~-------~~~ 120 (364)
.++++||||| +|+||++++++|+++|++|++++|+.++...+. . ..+.++.+|++|.+. .. +..
T Consensus 2 l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 81 (264)
T 3tfo_A 2 VMDKVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAGGTALAQVLDVTDRHSVAAFAQAAVDTWGR 81 (264)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 3468999999 999999999999999999999999877654432 1 356788899999763 22 236
Q ss_pred CceeeEEEEecCCCCCCC----ChhhhHHHHHH----------HHhhcCCccEEEEEccceeecCCCCccccCCCCCCCC
Q 017914 121 LKNYTHLLVSIPPLEGTG----DPMLKHGELLR----------STLMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANPT 186 (364)
Q Consensus 121 ~d~v~~~~~~~~~~~~~~----~~~~~~~~~l~----------~a~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~ 186 (364)
+|+++|+++......... +.......|+. ..+++.+..++|++||...+... ...
T Consensus 82 iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~-----------~~~ 150 (264)
T 3tfo_A 82 IDVLVNNAGVMPLSPLAAVKVDEWERMIDVNIKGVLWGIGAVLPIMEAQRSGQIINIGSIGALSVV-----------PTA 150 (264)
T ss_dssp CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCC-----------TTC
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCeEEEEEcCHHHcccC-----------CCC
Confidence 899999997644322111 11111122222 22234456799999997654221 234
Q ss_pred ChhHHHHHHHHHHHHHhhhhc-CCcEEEEEecceecCCCChHHHHHHhcCcccccccccCCcccccccHHHHHHHHHHHc
Q 017914 187 TELGRLRLSAEKGWLNLGRDL-GISAQVFRLGGIYGPGRSSVDTIIKQLPLSEGQKMRRARQYTSRIHVDDICQVLSASI 265 (364)
Q Consensus 187 ~~Y~~sK~~~E~~~~~~~~~~-~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l 265 (364)
..|+.+|...+.+.+.++.+. |++++.|+||.+..+..... ........... ....+...+|+|++++.++
T Consensus 151 ~~Y~asKaal~~l~~~la~e~~gIrvn~v~PG~v~T~~~~~~---~~~~~~~~~~~-----~~~~~~~pedvA~~v~~l~ 222 (264)
T 3tfo_A 151 AVYCATKFAVRAISDGLRQESTNIRVTCVNPGVVESELAGTI---THEETMAAMDT-----YRAIALQPADIARAVRQVI 222 (264)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCSSEEEEEEEECCC-------------------------------CCCHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHhCCCCEEEEEecCCCcCcccccc---cchhHHHHHHh-----hhccCCCHHHHHHHHHHHh
Confidence 679999999999999887654 89999999999876532211 00000000000 0111368999999999999
Q ss_pred cCCCC---CceEEEeCCC
Q 017914 266 DKPSA---WNVYNVVDDD 280 (364)
Q Consensus 266 ~~~~~---g~~~~i~~~~ 280 (364)
+.+.. +++.-...+.
T Consensus 223 s~~~~~~~~~i~i~p~~~ 240 (264)
T 3tfo_A 223 EAPQSVDTTEITIRPTAS 240 (264)
T ss_dssp HSCTTEEEEEEEEEECC-
T ss_pred cCCccCccceEEEecCcc
Confidence 98755 4455444443
|
| >3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.75 E-value=4.1e-18 Score=149.38 Aligned_cols=214 Identities=14% Similarity=0.104 Sum_probs=138.6
Q ss_pred CCCCCeEEEEc-C--ChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhh-----CCceEEEccCChhhH--Hhh-------
Q 017914 56 WQSPNRMLILG-M--GFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQ-----SGFDVHLFNANETAL--MIL------- 118 (364)
Q Consensus 56 ~~~~~~vlVtG-t--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~-----~~~~~~~~D~~~~~~--~~~------- 118 (364)
...+++||||| + |+||++++++|+++|++|++++|+....+.+.+ ..+.++.+|++|.+. ..+
T Consensus 11 ~~~~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 90 (271)
T 3ek2_A 11 FLDGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFGSELVFPCDVADDAQIDALFASLKTHW 90 (271)
T ss_dssp TTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHC
T ss_pred ccCCCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchhhHHHHHHHHHHcCCcEEEECCCCCHHHHHHHHHHHHHHc
Confidence 46678999998 8 999999999999999999999998543332221 357899999999764 222
Q ss_pred ccCceeeEEEEecCCC---CC-CC-----ChhhhHH------HHHHHHhhcC--CccEEEEEccceeecCCCCccccCCC
Q 017914 119 TTLKNYTHLLVSIPPL---EG-TG-----DPMLKHG------ELLRSTLMNG--HLQWLGYLSSTGVYGHSGGAWVDEDY 181 (364)
Q Consensus 119 ~~~d~v~~~~~~~~~~---~~-~~-----~~~~~~~------~~l~~a~~~~--~~~r~v~~Ss~~vy~~~~~~~~~E~~ 181 (364)
..+|+++|+++..... .. .. +...... .++..++... ...++|++||...+..
T Consensus 91 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~---------- 160 (271)
T 3ek2_A 91 DSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSYLGAERA---------- 160 (271)
T ss_dssp SCEEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEEEEEEEEEEECGGGTSB----------
T ss_pred CCCCEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhccCceEEEEeccccccC----------
Confidence 3579999998765421 11 11 1111112 2333333221 2348999998765422
Q ss_pred CCCCCChhHHHHHHHHHHHHHhhhh---cCCcEEEEEecceecCCCChHH---HHHHhcCcccccccccCCcccccccHH
Q 017914 182 PANPTTELGRLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRSSVD---TIIKQLPLSEGQKMRRARQYTSRIHVD 255 (364)
Q Consensus 182 ~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~i~v~ 255 (364)
......|+.+|.+.+.+.+.++.+ .|+++++++||.+..+...... .+... +.. ......+..++
T Consensus 161 -~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~--~~~------~~~~~~~~~pe 231 (271)
T 3ek2_A 161 -IPNYNTMGLAKAALEASVRYLAVSLGAKGVRVNAISAGPIKTLAASGIKSFGKILDF--VES------NSPLKRNVTIE 231 (271)
T ss_dssp -CTTTTHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCC-----CCCHHHHHHHHH--HHH------HSTTSSCCCHH
T ss_pred -CCCccchhHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccchhhhcccchHHHHHH--HHh------cCCcCCCCCHH
Confidence 123468999999999999988754 4899999999999876532211 11111 000 00112347799
Q ss_pred HHHHHHHHHccCC---CCCceEEEeCCCCCCHHHHH
Q 017914 256 DICQVLSASIDKP---SAWNVYNVVDDDPAPREEVF 288 (364)
Q Consensus 256 Dva~~~~~~l~~~---~~g~~~~i~~~~~~s~~el~ 288 (364)
|+|++++.++... -.|+++++.+|..++..++.
T Consensus 232 dva~~i~~l~s~~~~~~tG~~i~vdgG~~~~~~~~~ 267 (271)
T 3ek2_A 232 QVGNAGAFLLSDLASGVTAEVMHVDSGFNAVVGGMA 267 (271)
T ss_dssp HHHHHHHHHHSGGGTTCCSEEEEESTTGGGBCCCC-
T ss_pred HHHHHHHHHcCcccCCeeeeEEEECCCeeeehhhhh
Confidence 9999999999754 34899999998777666654
|
| >3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str} | Back alignment and structure |
|---|
Probab=99.75 E-value=5.6e-17 Score=141.08 Aligned_cols=212 Identities=10% Similarity=0.012 Sum_probs=132.0
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEe-Cchhhhh----hh--hCCceEEEccCChhhH--Hhh-------c
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCT-NVMKKKE----LE--QSGFDVHLFNANETAL--MIL-------T 119 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r-~~~~~~~----l~--~~~~~~~~~D~~~~~~--~~~-------~ 119 (364)
..+++||||| +|+||++++++|+++|++|+++.+ +.+.... +. ...+.++.+|++|.+. ..+ .
T Consensus 6 l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 85 (259)
T 3edm_A 6 FTNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLGRSALAIKADLTNAAEVEAAISAAADKFG 85 (259)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHHTTTSCCEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHhC
Confidence 4568999999 999999999999999999999855 4333222 21 1457889999999763 222 3
Q ss_pred cCceeeEEEEecCCCCCCCCh-----hhhHHHH------HHHHhhcCC--ccEEEEEccceeecCCCCccccCCCCCCCC
Q 017914 120 TLKNYTHLLVSIPPLEGTGDP-----MLKHGEL------LRSTLMNGH--LQWLGYLSSTGVYGHSGGAWVDEDYPANPT 186 (364)
Q Consensus 120 ~~d~v~~~~~~~~~~~~~~~~-----~~~~~~~------l~~a~~~~~--~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~ 186 (364)
.+|+++|+++.........+. ......| +..++...- ..++|++||...+.. +....
T Consensus 86 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~----------~~~~~ 155 (259)
T 3edm_A 86 EIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAKGGAIVTFSSQAGRDG----------GGPGA 155 (259)
T ss_dssp SEEEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHHC----------CSTTC
T ss_pred CCCEEEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCEEEEEcCHHhccC----------CCCCc
Confidence 689999998755332222111 1112223 333332221 348999999765511 11134
Q ss_pred ChhHHHHHHHHHHHHHhhhhcC--CcEEEEEecceecCCCChHHHHHHhcCcccccccccCCcccccccHHHHHHHHHHH
Q 017914 187 TELGRLRLSAEKGWLNLGRDLG--ISAQVFRLGGIYGPGRSSVDTIIKQLPLSEGQKMRRARQYTSRIHVDDICQVLSAS 264 (364)
Q Consensus 187 ~~Y~~sK~~~E~~~~~~~~~~~--~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~ 264 (364)
..|+.+|...+.+.+.++.+.+ ++++.+.||.+..+....+. ..... ...........+.+++|+|++++.+
T Consensus 156 ~~Y~asKaa~~~l~~~la~e~~~~I~vn~v~PG~v~T~~~~~~~---~~~~~---~~~~~~~p~~r~~~pedva~~v~~L 229 (259)
T 3edm_A 156 LAYATSKGAVMTFTRGLAKEVGPKIRVNAVCPGMISTTFHDTFT---KPEVR---ERVAGATSLKREGSSEDVAGLVAFL 229 (259)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCC----------------------------CCBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCcCccccccc---ChHHH---HHHHhcCCCCCCcCHHHHHHHHHHH
Confidence 6899999999999998876543 89999999998775422111 00000 0011111223457899999999999
Q ss_pred ccCCC---CCceEEEeCCCCCCH
Q 017914 265 IDKPS---AWNVYNVVDDDPAPR 284 (364)
Q Consensus 265 l~~~~---~g~~~~i~~~~~~s~ 284 (364)
+.... .|+.|++.+|.....
T Consensus 230 ~s~~~~~itG~~i~vdGg~~~~~ 252 (259)
T 3edm_A 230 ASDDAAYVTGACYDINGGVLFSE 252 (259)
T ss_dssp HSGGGTTCCSCEEEESBCSSBC-
T ss_pred cCccccCccCCEEEECCCcCCCC
Confidence 87653 489999988764443
|
| >3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A* | Back alignment and structure |
|---|
Probab=99.75 E-value=9.7e-17 Score=140.08 Aligned_cols=211 Identities=8% Similarity=-0.083 Sum_probs=136.8
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhh----h----CCceEEEccCChhhH--Hh-------h
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELE----Q----SGFDVHLFNANETAL--MI-------L 118 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~----~----~~~~~~~~D~~~~~~--~~-------~ 118 (364)
..++++|||| +|+||++++++|+++|++|++++|+.++...+. . ..+.++.+|++|.+. .. +
T Consensus 6 l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 85 (265)
T 3lf2_A 6 LSEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFASVCDVLDALQVRAFAEACERTL 85 (265)
T ss_dssp CTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCCHHHHHHHHHHHHHHc
Confidence 4568999999 999999999999999999999999876654322 1 247889999999663 22 2
Q ss_pred ccCceeeEEEEecCCCCCCCC----hhhhHHHHHHH------H----hhcCCccEEEEEccceeecCCCCccccCCCCCC
Q 017914 119 TTLKNYTHLLVSIPPLEGTGD----PMLKHGELLRS------T----LMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPAN 184 (364)
Q Consensus 119 ~~~d~v~~~~~~~~~~~~~~~----~~~~~~~~l~~------a----~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~ 184 (364)
..+|+++|+++.......... .......|+.. + +++.+..++|++||...+... .
T Consensus 86 g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~ 154 (265)
T 3lf2_A 86 GCASILVNNAGQGRVSTFAETTDEAWSEELQLKFFSVIHPVRAFLPQLESRADAAIVCVNSLLASQPE-----------P 154 (265)
T ss_dssp CSCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTEEEEEEEEGGGTSCC-----------T
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCeEEEEECCcccCCCC-----------C
Confidence 368999999986433221111 11122223322 2 234556789999987644221 2
Q ss_pred CCChhHHHHHHHHHHHHHhhhh---cCCcEEEEEecceecCCCChHHHHHHhcC-----cccc-cccc--cCCccccccc
Q 017914 185 PTTELGRLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRSSVDTIIKQLP-----LSEG-QKMR--RARQYTSRIH 253 (364)
Q Consensus 185 ~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~~-----~~~~-~~~~--~~~~~~~~i~ 253 (364)
....|+.+|...+.+.+.++.+ .|++++.|+||.+.++.. ........ .... .... .......+..
T Consensus 155 ~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~ 231 (265)
T 3lf2_A 155 HMVATSAARAGVKNLVRSMAFEFAPKGVRVNGILIGLVESGQW---RRRFEAREERELDWAQWTAQLARNKQIPLGRLGK 231 (265)
T ss_dssp TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHH---HHHHTC------CHHHHHHHHHHHTTCTTCSCBC
T ss_pred CchhhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCcCchh---hhhhhhhhhhccCHHHHHHHHhhccCCCcCCCcC
Confidence 3468999999999999888754 389999999999876421 11110000 0000 0000 0011123578
Q ss_pred HHHHHHHHHHHccCC---CCCceEEEeCCCC
Q 017914 254 VDDICQVLSASIDKP---SAWNVYNVVDDDP 281 (364)
Q Consensus 254 v~Dva~~~~~~l~~~---~~g~~~~i~~~~~ 281 (364)
++|+|++++.++... -.|+++++.+|..
T Consensus 232 pedvA~~v~fL~s~~~~~itG~~i~vdGG~~ 262 (265)
T 3lf2_A 232 PIEAARAILFLASPLSAYTTGSHIDVSGGLS 262 (265)
T ss_dssp HHHHHHHHHHHHSGGGTTCCSEEEEESSSCC
T ss_pred HHHHHHHHHHHhCchhcCcCCCEEEECCCCc
Confidence 999999999998754 3489999988753
|
| >4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=99.75 E-value=1.6e-17 Score=143.23 Aligned_cols=208 Identities=7% Similarity=-0.054 Sum_probs=133.6
Q ss_pred CCCeEEEEc-CChhhHHHHHHHHh-CCCEEEEEEeCchhhhhhhhCCceEEEccCChhhH--Hhhc-----cCceeeEEE
Q 017914 58 SPNRMLILG-MGFVGRIFAEKIKN-QGWVVSGTCTNVMKKKELEQSGFDVHLFNANETAL--MILT-----TLKNYTHLL 128 (364)
Q Consensus 58 ~~~~vlVtG-tG~iG~~l~~~L~~-~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~--~~~~-----~~d~v~~~~ 128 (364)
.+++||||| +|+||++++++|++ .|+.|++.+|+..... ..+.++.+|++|.+. ..++ .+|+++|++
T Consensus 3 ~~k~vlITGas~gIG~~~a~~l~~~~g~~v~~~~~~~~~~~----~~~~~~~~Dv~~~~~v~~~~~~~~~~~id~lv~nA 78 (244)
T 4e4y_A 3 AMANYLVTGGSKGIGKAVVELLLQNKNHTVINIDIQQSFSA----ENLKFIKADLTKQQDITNVLDIIKNVSFDGIFLNA 78 (244)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHTTSTTEEEEEEESSCCCCC----TTEEEEECCTTCHHHHHHHHHHTTTCCEEEEEECC
T ss_pred CCCeEEEeCCCChHHHHHHHHHHhcCCcEEEEecccccccc----ccceEEecCcCCHHHHHHHHHHHHhCCCCEEEECC
Confidence 457899999 99999999999999 7899999998765221 457899999999764 3332 679999988
Q ss_pred EecCCCCCCCC----hhhhHHHHH------HHHhhcCC--ccEEEEEccceeecCCCCccccCCCCCCCCChhHHHHHHH
Q 017914 129 VSIPPLEGTGD----PMLKHGELL------RSTLMNGH--LQWLGYLSSTGVYGHSGGAWVDEDYPANPTTELGRLRLSA 196 (364)
Q Consensus 129 ~~~~~~~~~~~----~~~~~~~~l------~~a~~~~~--~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~~sK~~~ 196 (364)
+.......... .......|+ ..++...- -.++|++||...+... .....|+.+|...
T Consensus 79 g~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~-----------~~~~~Y~asKaa~ 147 (244)
T 4e4y_A 79 GILIKGSIFDIDIESIKKVLDLNVWSSIYFIKGLENNLKVGASIVFNGSDQCFIAK-----------PNSFAYTLSKGAI 147 (244)
T ss_dssp CCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHTGGGEEEEEEEEEECCGGGTCCC-----------TTBHHHHHHHHHH
T ss_pred ccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHhccCcEEEEECCHHHccCC-----------CCCchhHHHHHHH
Confidence 76543221111 111222333 33332211 1489999987655321 1336899999999
Q ss_pred HHHHHHhhh---hcCCcEEEEEecceecCCCCh-HHHHHHhcCc--c-cccccccCCcccccccHHHHHHHHHHHccCCC
Q 017914 197 EKGWLNLGR---DLGISAQVFRLGGIYGPGRSS-VDTIIKQLPL--S-EGQKMRRARQYTSRIHVDDICQVLSASIDKPS 269 (364)
Q Consensus 197 E~~~~~~~~---~~~~~~~ilRp~~v~g~~~~~-~~~~~~~~~~--~-~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~ 269 (364)
+.+.+.++. ..|+++++++||.+.++.... .......... . .............+.+++|+|++++.++....
T Consensus 148 ~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~l~s~~~ 227 (244)
T 4e4y_A 148 AQMTKSLALDLAKYQIRVNTVCPGTVDTDLYRNLIQKYANNVGISFDEAQKQEEKEFPLNRIAQPQEIAELVIFLLSDKS 227 (244)
T ss_dssp HHHHHHHHHHHGGGTCEEEEEEESCBCCHHHHHHHHHHHHHHTCCHHHHHHHHHTTSTTSSCBCHHHHHHHHHHHHSGGG
T ss_pred HHHHHHHHHHHHHcCeEEEEEecCccCchhhHHHHHhhhhhcCCCHHHHHHHHhhcCCCCCCcCHHHHHHHHHHHhcCcc
Confidence 999998875 458999999999997653211 1110000000 0 00000111122346889999999999997542
Q ss_pred ---CCceEEEeCCC
Q 017914 270 ---AWNVYNVVDDD 280 (364)
Q Consensus 270 ---~g~~~~i~~~~ 280 (364)
.|+.+++.+|.
T Consensus 228 ~~itG~~i~vdGG~ 241 (244)
T 4e4y_A 228 KFMTGGLIPIDGGY 241 (244)
T ss_dssp TTCCSCEEEESTTG
T ss_pred ccccCCeEeECCCc
Confidence 48999998774
|
| >3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum} | Back alignment and structure |
|---|
Probab=99.75 E-value=1.3e-17 Score=144.42 Aligned_cols=195 Identities=7% Similarity=0.031 Sum_probs=131.7
Q ss_pred CCCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCChhhH--Hhh-------ccCceee
Q 017914 56 WQSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETAL--MIL-------TTLKNYT 125 (364)
Q Consensus 56 ~~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~--~~~-------~~~d~v~ 125 (364)
..|+++||||| +|+||++++++|+++|++|++++|+..+.. ...+.+|++|.+. ..+ ..+|+++
T Consensus 19 ~~m~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~------~~~~~~d~~d~~~v~~~~~~~~~~~g~iD~li 92 (251)
T 3orf_A 19 SHMSKNILVLGGSGALGAEVVKFFKSKSWNTISIDFRENPNA------DHSFTIKDSGEEEIKSVIEKINSKSIKVDTFV 92 (251)
T ss_dssp ---CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTTS------SEEEECSCSSHHHHHHHHHHHHTTTCCEEEEE
T ss_pred cccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCccccc------ccceEEEeCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 45678999999 999999999999999999999999876532 2457789998663 222 3568999
Q ss_pred EEEEecCCCCCCCC-----hhhhHHHHH------HHHhhcC--CccEEEEEccceeecCCCCccccCCCCCCCCChhHHH
Q 017914 126 HLLVSIPPLEGTGD-----PMLKHGELL------RSTLMNG--HLQWLGYLSSTGVYGHSGGAWVDEDYPANPTTELGRL 192 (364)
Q Consensus 126 ~~~~~~~~~~~~~~-----~~~~~~~~l------~~a~~~~--~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~~s 192 (364)
|+++.........+ .......|+ ..++... ...++|++||...+.. ..+...|+.+
T Consensus 93 ~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~-----------~~~~~~Y~~s 161 (251)
T 3orf_A 93 CAAGGWSGGNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQGGLFVLTGASAALNR-----------TSGMIAYGAT 161 (251)
T ss_dssp ECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSC-----------CTTBHHHHHH
T ss_pred ECCccCCCCCcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhccCCEEEEEechhhccC-----------CCCCchhHHH
Confidence 98876543221111 111222233 2332211 1248999999765522 1234689999
Q ss_pred HHHHHHHHHHhhhh-----cCCcEEEEEecceecCCCChHHHHHHhcCcccccccccCCcccccccHHHHHHHHHHHccC
Q 017914 193 RLSAEKGWLNLGRD-----LGISAQVFRLGGIYGPGRSSVDTIIKQLPLSEGQKMRRARQYTSRIHVDDICQVLSASIDK 267 (364)
Q Consensus 193 K~~~E~~~~~~~~~-----~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~ 267 (364)
|.+.|.+++.++.+ .++++++++||.+.++. ...+.. ......+++++|+|++++.++..
T Consensus 162 Kaa~~~~~~~la~e~~~~~~gi~v~~v~PG~v~t~~---~~~~~~------------~~~~~~~~~~~dva~~i~~l~~~ 226 (251)
T 3orf_A 162 KAATHHIIKDLASENGGLPAGSTSLGILPVTLDTPT---NRKYMS------------DANFDDWTPLSEVAEKLFEWSTN 226 (251)
T ss_dssp HHHHHHHHHHHTSTTSSSCTTCEEEEEEESCBCCHH---HHHHCT------------TSCGGGSBCHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHhcccCCCcEEEEEecCcCcCcc---hhhhcc------------cccccccCCHHHHHHHHHHHhcC
Confidence 99999999998766 57999999999886532 111100 11234568899999999999987
Q ss_pred -C---CCCceEEEeCCCCC
Q 017914 268 -P---SAWNVYNVVDDDPA 282 (364)
Q Consensus 268 -~---~~g~~~~i~~~~~~ 282 (364)
. -.|+.+++.+++..
T Consensus 227 ~~~~~~tG~~i~v~~g~~~ 245 (251)
T 3orf_A 227 SDSRPTNGSLVKFETKSKV 245 (251)
T ss_dssp GGGCCCTTCEEEEEEETTE
T ss_pred ccccCCcceEEEEecCCcc
Confidence 2 24899999877643
|
| >4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A* | Back alignment and structure |
|---|
Probab=99.75 E-value=5.5e-17 Score=141.85 Aligned_cols=204 Identities=10% Similarity=-0.021 Sum_probs=134.5
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEe-Cchhhhhh----h--hCCceEEEccCChhhH--Hhh-------c
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCT-NVMKKKEL----E--QSGFDVHLFNANETAL--MIL-------T 119 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r-~~~~~~~l----~--~~~~~~~~~D~~~~~~--~~~-------~ 119 (364)
.++++||||| +|+||++++++|+++|++|+++.+ +.+..... . ..++.++.+|++|.+. ..+ .
T Consensus 24 l~~k~vlVTGas~gIG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g 103 (267)
T 4iiu_A 24 AMSRSVLVTGASKGIGRAIARQLAADGFNIGVHYHRDAAGAQETLNAIVANGGNGRLLSFDVANREQCREVLEHEIAQHG 103 (267)
T ss_dssp -CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred cCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhC
Confidence 4568999999 999999999999999999987664 44333221 1 1467899999999763 222 3
Q ss_pred cCceeeEEEEecCCCCCC----CChhhhHHH------HHHHHh-----hcCCccEEEEEccceeecCCCCccccCCCCCC
Q 017914 120 TLKNYTHLLVSIPPLEGT----GDPMLKHGE------LLRSTL-----MNGHLQWLGYLSSTGVYGHSGGAWVDEDYPAN 184 (364)
Q Consensus 120 ~~d~v~~~~~~~~~~~~~----~~~~~~~~~------~l~~a~-----~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~ 184 (364)
.+|.++|+++........ .+....... ++..++ +..+..++|++||...+... .
T Consensus 104 ~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~ 172 (267)
T 4iiu_A 104 AWYGVVSNAGIARDAAFPALSNDDWDAVIHTNLDSFYNVIQPCIMPMIGARQGGRIITLSSVSGVMGN-----------R 172 (267)
T ss_dssp CCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCHHHHHCC-----------T
T ss_pred CccEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcchHhccCC-----------C
Confidence 789999998765432211 111111222 233332 14556799999997654322 1
Q ss_pred CCChhHHHHHHHHHHHHHhhhh---cCCcEEEEEecceecCCCChHHHHHHhcCcccccccccCCcccccccHHHHHHHH
Q 017914 185 PTTELGRLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRSSVDTIIKQLPLSEGQKMRRARQYTSRIHVDDICQVL 261 (364)
Q Consensus 185 ~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~ 261 (364)
+...|+.+|.+.+.+.+.++.+ .|+++++++||.+.++............. .. .....+.+++|+|+++
T Consensus 173 ~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~--~~------~p~~~~~~~edva~~~ 244 (267)
T 4iiu_A 173 GQVNYSAAKAGIIGATKALAIELAKRKITVNCIAPGLIDTGMIEMEESALKEAM--SM------IPMKRMGQAEEVAGLA 244 (267)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCCCCHHHHHHHH--HT------CTTCSCBCHHHHHHHH
T ss_pred CCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEEeeecCCcccccHHHHHHHH--hc------CCCCCCcCHHHHHHHH
Confidence 3468999999999888887654 38999999999998875432221111100 00 0112347899999999
Q ss_pred HHHccCC---CCCceEEEeCC
Q 017914 262 SASIDKP---SAWNVYNVVDD 279 (364)
Q Consensus 262 ~~~l~~~---~~g~~~~i~~~ 279 (364)
+.++... -.|+++++.+|
T Consensus 245 ~~L~s~~~~~itG~~i~vdGG 265 (267)
T 4iiu_A 245 SYLMSDIAGYVTRQVISINGG 265 (267)
T ss_dssp HHHHSGGGTTCCSCEEEESTT
T ss_pred HHHhCCcccCccCCEEEeCCC
Confidence 9998754 34899999876
|
| >2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.74 E-value=2.3e-17 Score=143.77 Aligned_cols=206 Identities=12% Similarity=-0.004 Sum_probs=136.3
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhh---CCceEEEccCChhhH--Hhh-------ccCce
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQ---SGFDVHLFNANETAL--MIL-------TTLKN 123 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~---~~~~~~~~D~~~~~~--~~~-------~~~d~ 123 (364)
..+|+||||| +|+||++++++|+++|++|++++|+.++...+.+ .++.++.+|++|.+. ..+ ..+|+
T Consensus 4 l~~k~vlITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD~ 83 (263)
T 2a4k_A 4 LSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALEAEAIAVVADVSDPKAVEAVFAEALEEFGRLHG 83 (263)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCCSSEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCceEEEEcCCCCHHHHHHHHHHHHHHcCCCcE
Confidence 4568999999 9999999999999999999999998776554432 357889999999763 222 35799
Q ss_pred eeEEEEecCCCCCCCCh----hhhHHHHH------HHHhhc--CCccEEEEEccceeecCCCCccccCCCCCCCCChhHH
Q 017914 124 YTHLLVSIPPLEGTGDP----MLKHGELL------RSTLMN--GHLQWLGYLSSTGVYGHSGGAWVDEDYPANPTTELGR 191 (364)
Q Consensus 124 v~~~~~~~~~~~~~~~~----~~~~~~~l------~~a~~~--~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~~ 191 (364)
++|+++........... ......|+ ..++.. ....++|++||...++ .. ....|+.
T Consensus 84 lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~-~~-----------~~~~Y~a 151 (263)
T 2a4k_A 84 VAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSVAGLG-AF-----------GLAHYAA 151 (263)
T ss_dssp EEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCCTTCC-HH-----------HHHHHHH
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEecchhcC-CC-----------CcHHHHH
Confidence 99998764432111111 11122232 222221 1145899999987651 10 2357999
Q ss_pred HHHHHHHHHHHhhhh---cCCcEEEEEecceecCCCChH-HHHHHhcCcccccccccCCcccccccHHHHHHHHHHHccC
Q 017914 192 LRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRSSV-DTIIKQLPLSEGQKMRRARQYTSRIHVDDICQVLSASIDK 267 (364)
Q Consensus 192 sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~ 267 (364)
+|...+.+.+.++.+ .|+++++++||.+.++....+ ...... +.... ....+.+.+|+|++++.++..
T Consensus 152 sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~--~~~~~------p~~~~~~p~dvA~~v~~l~s~ 223 (263)
T 2a4k_A 152 GKLGVVGLARTLALELARKGVRVNVLLPGLIQTPMTAGLPPWAWEQ--EVGAS------PLGRAGRPEEVAQAALFLLSE 223 (263)
T ss_dssp CSSHHHHHHHHHHHHHTTTTCEEEEEEECSBCCGGGTTSCHHHHHH--HHHTS------TTCSCBCHHHHHHHHHHHHSG
T ss_pred HHHHHHHHHHHHHHHhhhhCcEEEEEEeCcCcCchhhhcCHHHHHH--HHhcC------CCCCCcCHHHHHHHHHHHhCc
Confidence 999999988887654 489999999999987642211 111110 00000 012357899999999999875
Q ss_pred C---CCCceEEEeCCCCC
Q 017914 268 P---SAWNVYNVVDDDPA 282 (364)
Q Consensus 268 ~---~~g~~~~i~~~~~~ 282 (364)
. -.|+.+++.+|..+
T Consensus 224 ~~~~~tG~~i~vdgG~~~ 241 (263)
T 2a4k_A 224 ESAYITGQALYVDGGRSI 241 (263)
T ss_dssp GGTTCCSCEEEESTTTTT
T ss_pred cccCCcCCEEEECCCccc
Confidence 4 34889999887644
|
| >1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.74 E-value=2.3e-17 Score=144.28 Aligned_cols=197 Identities=15% Similarity=0.066 Sum_probs=132.1
Q ss_pred CCCCCeEEEEc-CChhhHHHHHHHHhCC---CEEEEEEeCchhhhhhhh-----CCceEEEccCChhhH--Hhhc-----
Q 017914 56 WQSPNRMLILG-MGFVGRIFAEKIKNQG---WVVSGTCTNVMKKKELEQ-----SGFDVHLFNANETAL--MILT----- 119 (364)
Q Consensus 56 ~~~~~~vlVtG-tG~iG~~l~~~L~~~g---~~V~~~~r~~~~~~~l~~-----~~~~~~~~D~~~~~~--~~~~----- 119 (364)
...+++||||| +|+||++++++|+++| ++|++++|+.+....+.+ .++.++.+|++|.+. ..++
T Consensus 18 ~~~~k~vlITGasggIG~~la~~L~~~G~~~~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 97 (267)
T 1sny_A 18 GSHMNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHSNIHILEIDLRNFDAYDKLVADIEGV 97 (267)
T ss_dssp --CCSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHHHHHHCTTEEEEECCTTCGGGHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCCcHHHHHHHHHHhcCCCCcEEEEEecChhhhHHHHHhhccCCceEEEEecCCChHHHHHHHHHHHHh
Confidence 45668999999 9999999999999999 999999998765443321 368899999999763 2222
Q ss_pred ----cCceeeEEEEecCCCCCCC-----ChhhhHH------HHHHHHhh----cC------C-----ccEEEEEccceee
Q 017914 120 ----TLKNYTHLLVSIPPLEGTG-----DPMLKHG------ELLRSTLM----NG------H-----LQWLGYLSSTGVY 169 (364)
Q Consensus 120 ----~~d~v~~~~~~~~~~~~~~-----~~~~~~~------~~l~~a~~----~~------~-----~~r~v~~Ss~~vy 169 (364)
.+|+++|+++......... +...... .++..++. +. + ..+||++||...+
T Consensus 98 ~g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~ 177 (267)
T 1sny_A 98 TKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGS 177 (267)
T ss_dssp HGGGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCGGGC
T ss_pred cCCCCccEEEECCCcCCCccccccCCHHHHHHHHhhhchHHHHHHHHHHHHHhhcccccccccccCCCceEEEEeccccc
Confidence 6999999998654211111 1111111 22333221 11 2 4689999998765
Q ss_pred cCCCCccccCCCCCCCCChhHHHHHHHHHHHHHhhhh---cCCcEEEEEecceecCCCChHHHHHHhcCcccccccccCC
Q 017914 170 GHSGGAWVDEDYPANPTTELGRLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRSSVDTIIKQLPLSEGQKMRRAR 246 (364)
Q Consensus 170 ~~~~~~~~~E~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (364)
.... +..+...|+.+|...|.+++.++.+ .+++++++|||.+..+....
T Consensus 178 ~~~~--------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~-------------------- 229 (267)
T 1sny_A 178 IQGN--------TDGGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTDMGGS-------------------- 229 (267)
T ss_dssp STTC--------CSCCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCSTTTCT--------------------
T ss_pred ccCC--------CCCCchHHHHHHHHHHHHHHHHHHHhhcCCcEEEEeCCcceecCCCCC--------------------
Confidence 3321 1124568999999999999888755 58999999999986543210
Q ss_pred cccccccHHHHHHHHHHHccCC---CCCceEEEeCCCCCC
Q 017914 247 QYTSRIHVDDICQVLSASIDKP---SAWNVYNVVDDDPAP 283 (364)
Q Consensus 247 ~~~~~i~v~Dva~~~~~~l~~~---~~g~~~~i~~~~~~s 283 (364)
..++..+|+|+.++.++... ..|..|++ +|..+.
T Consensus 230 --~~~~~~~~~a~~~~~~~~~~~~~~~G~~~~~-~g~~~~ 266 (267)
T 1sny_A 230 --SAPLDVPTSTGQIVQTISKLGEKQNGGFVNY-DGTPLA 266 (267)
T ss_dssp --TCSBCHHHHHHHHHHHHHHCCGGGTTCEECT-TSCBCC
T ss_pred --CCCCCHHHHHHHHHHHHHhcCcCCCCcEEcc-CCcCcC
Confidence 12367899999999999754 23655554 444443
|
| >1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A* | Back alignment and structure |
|---|
Probab=99.74 E-value=3.6e-17 Score=143.53 Aligned_cols=189 Identities=10% Similarity=-0.033 Sum_probs=127.8
Q ss_pred CCCeEEEEc-CChhhHHHHHHHHh-CCCEEEEEEeCchhhhhh----h--hCCceEEEccCChhhH--Hhhc-------c
Q 017914 58 SPNRMLILG-MGFVGRIFAEKIKN-QGWVVSGTCTNVMKKKEL----E--QSGFDVHLFNANETAL--MILT-------T 120 (364)
Q Consensus 58 ~~~~vlVtG-tG~iG~~l~~~L~~-~g~~V~~~~r~~~~~~~l----~--~~~~~~~~~D~~~~~~--~~~~-------~ 120 (364)
.+++||||| +|+||++++++|++ +|++|++++|+.++...+ . ..++.++.+|++|.+. ..++ .
T Consensus 3 ~~k~vlITGasggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~ 82 (276)
T 1wma_A 3 GIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYGG 82 (276)
T ss_dssp CCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence 458999999 99999999999999 999999999987654432 1 1357899999999663 3332 7
Q ss_pred CceeeEEEEecCCCCCCCC----hhhhHH------HHHHHHhhcC--CccEEEEEccceeecC-CC----------Cccc
Q 017914 121 LKNYTHLLVSIPPLEGTGD----PMLKHG------ELLRSTLMNG--HLQWLGYLSSTGVYGH-SG----------GAWV 177 (364)
Q Consensus 121 ~d~v~~~~~~~~~~~~~~~----~~~~~~------~~l~~a~~~~--~~~r~v~~Ss~~vy~~-~~----------~~~~ 177 (364)
+|+|+|+++.......... ...... .++..++... ...++|++||...+.. .. ...+
T Consensus 83 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~ 162 (276)
T 1wma_A 83 LDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSIMSVRALKSCSPELQQKFRSETI 162 (276)
T ss_dssp EEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHHHHHTSCHHHHHHHHCSSC
T ss_pred CCEEEECCcccccCCCccccHHHHHhhhheeeeeHHHHHHHHHHhhCCCCEEEEECChhhhcccccCChhHHhhcccccc
Confidence 8999999986543221111 111122 2344444332 1248999999766531 00 0011
Q ss_pred cCC-------------------CCCCCCChhHHHHHHHHHHHHHhhhh-------cCCcEEEEEecceecCCCChHHHHH
Q 017914 178 DED-------------------YPANPTTELGRLRLSAEKGWLNLGRD-------LGISAQVFRLGGIYGPGRSSVDTII 231 (364)
Q Consensus 178 ~E~-------------------~~~~~~~~Y~~sK~~~E~~~~~~~~~-------~~~~~~ilRp~~v~g~~~~~~~~~~ 231 (364)
+|+ .+..|...|+.+|.+.|.+++.++.+ .++++++++||.+.++....
T Consensus 163 ~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~~~i~v~~v~PG~v~t~~~~~----- 237 (276)
T 1wma_A 163 TEEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMAGP----- 237 (276)
T ss_dssp CHHHHHHHHHHHHHHHHTTCTTTTTCCSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBCSTTTCT-----
T ss_pred chhhhhhhhhhhhhhhcccccccCCCccchhHHHHHHHHHHHHHHHHHhhcccCCCceEEEEecCCccccCcCCc-----
Confidence 111 11234579999999999999888754 48999999999987653211
Q ss_pred HhcCcccccccccCCcccccccHHHHHHHHHHHccCC
Q 017914 232 KQLPLSEGQKMRRARQYTSRIHVDDICQVLSASIDKP 268 (364)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~ 268 (364)
..+.+++|+|++++.++..+
T Consensus 238 -----------------~~~~~~~~~a~~~~~l~~~~ 257 (276)
T 1wma_A 238 -----------------KATKSPEEGAETPVYLALLP 257 (276)
T ss_dssp -----------------TCSBCHHHHTHHHHHHHSCC
T ss_pred -----------------cccCChhHhhhhHhhhhcCc
Confidence 12478999999999999754
|
| >3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A* | Back alignment and structure |
|---|
Probab=99.74 E-value=7.1e-17 Score=142.12 Aligned_cols=209 Identities=12% Similarity=0.060 Sum_probs=136.9
Q ss_pred ccCCCCCeEEEEc-CCh--hhHHHHHHHHhCCCEEEEEEeCc--hhhhhhhh--CCceEEEccCChhhH--Hhh------
Q 017914 54 SEWQSPNRMLILG-MGF--VGRIFAEKIKNQGWVVSGTCTNV--MKKKELEQ--SGFDVHLFNANETAL--MIL------ 118 (364)
Q Consensus 54 ~~~~~~~~vlVtG-tG~--iG~~l~~~L~~~g~~V~~~~r~~--~~~~~l~~--~~~~~~~~D~~~~~~--~~~------ 118 (364)
|....+++||||| +|+ ||++++++|+++|++|++++|+. +....+.. .++.++.+|++|.+. ..+
T Consensus 21 M~~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 100 (280)
T 3nrc_A 21 MGFLAGKKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQFKDRVEKLCAEFNPAAVLPCDVISDQEIKDLFVELGKV 100 (280)
T ss_dssp -CTTTTCEEEECCCCSTTCHHHHHHHHHHHTTCEEEEEECTTCHHHHHHHHGGGCCSEEEECCTTCHHHHHHHHHHHHHH
T ss_pred ccccCCCEEEEECCCCCCCHHHHHHHHHHHcCCEEEEeeCchHHHHHHHHHHhcCCceEEEeecCCHHHHHHHHHHHHHH
Confidence 3345678999999 877 99999999999999999999987 33333322 357899999999763 222
Q ss_pred -ccCceeeEEEEecCCC---CC------CCChhhhHHH------HHHHHhh---cCCccEEEEEccceeecCCCCccccC
Q 017914 119 -TTLKNYTHLLVSIPPL---EG------TGDPMLKHGE------LLRSTLM---NGHLQWLGYLSSTGVYGHSGGAWVDE 179 (364)
Q Consensus 119 -~~~d~v~~~~~~~~~~---~~------~~~~~~~~~~------~l~~a~~---~~~~~r~v~~Ss~~vy~~~~~~~~~E 179 (364)
..+|+++|+++..... .. ..+....... ++..++. .....++|++||...+..
T Consensus 101 ~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~~-------- 172 (280)
T 3nrc_A 101 WDGLDAIVHSIAFAPRDQLEGNFIDCVTREGFSIAHDISAYSFAALAKEGRSMMKNRNASMVALTYIGAEKA-------- 172 (280)
T ss_dssp CSSCCEEEECCCCCCGGGSSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECGGGTSC--------
T ss_pred cCCCCEEEECCccCCCcccCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeccccccC--------
Confidence 3579999998765431 00 0111111122 2222222 122468999998765422
Q ss_pred CCCCCCCChhHHHHHHHHHHHHHhhhh---cCCcEEEEEecceecCCCChH---HHHHHhcCcccccccccCCccccccc
Q 017914 180 DYPANPTTELGRLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRSSV---DTIIKQLPLSEGQKMRRARQYTSRIH 253 (364)
Q Consensus 180 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~i~ 253 (364)
......|+.+|.+.+.+.+.++.+ .|+++++++||.+..+..... ....... .. ......+.+
T Consensus 173 ---~~~~~~Y~asKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~--~~------~~p~~~~~~ 241 (280)
T 3nrc_A 173 ---MPSYNTMGVAKASLEATVRYTALALGEDGIKVNAVSAGPIKTLAASGISNFKKMLDYN--AM------VSPLKKNVD 241 (280)
T ss_dssp ---CTTTHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCSGGGGCTTHHHHHHHH--HH------HSTTCSCCC
T ss_pred ---CCCchhhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeccccchhhhcCcchHHHHHHH--Hh------cCCCCCCCC
Confidence 223468999999999999887654 589999999999987642211 1111110 00 001123477
Q ss_pred HHHHHHHHHHHccCC---CCCceEEEeCCCC
Q 017914 254 VDDICQVLSASIDKP---SAWNVYNVVDDDP 281 (364)
Q Consensus 254 v~Dva~~~~~~l~~~---~~g~~~~i~~~~~ 281 (364)
++|+|++++.++... -.|+++++.+|..
T Consensus 242 pedvA~~v~~l~s~~~~~~tG~~i~vdgG~~ 272 (280)
T 3nrc_A 242 IMEVGNTVAFLCSDMATGITGEVVHVDAGYH 272 (280)
T ss_dssp HHHHHHHHHHTTSGGGTTCCSCEEEESTTGG
T ss_pred HHHHHHHHHHHhCcccCCcCCcEEEECCCcc
Confidence 999999999999754 3489999988753
|
| >2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.74 E-value=8.2e-17 Score=144.74 Aligned_cols=206 Identities=10% Similarity=-0.037 Sum_probs=135.9
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEE-eCchhhhhhh-------hCCceEEEccCChhh-------------
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTC-TNVMKKKELE-------QSGFDVHLFNANETA------------- 114 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~-r~~~~~~~l~-------~~~~~~~~~D~~~~~------------- 114 (364)
..+++||||| +|+||++++++|+++|++|++++ |+.+....+. ..++.++.+|++|.+
T Consensus 44 l~~k~~lVTGas~GIG~aia~~La~~G~~Vv~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~ 123 (328)
T 2qhx_A 44 PTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPV 123 (328)
T ss_dssp -CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCC-------CCB
T ss_pred cCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCeEEEEEeeCCCchhcccccccccccc
Confidence 4568899999 99999999999999999999999 8876544321 135788999999865
Q ss_pred ----H--Hhh-------ccCceeeEEEEecCCCCCCCCh--------------hh----hHHHH------HHHH----hh
Q 017914 115 ----L--MIL-------TTLKNYTHLLVSIPPLEGTGDP--------------ML----KHGEL------LRST----LM 153 (364)
Q Consensus 115 ----~--~~~-------~~~d~v~~~~~~~~~~~~~~~~--------------~~----~~~~~------l~~a----~~ 153 (364)
. ..+ ..+|+++|+|+........... .. ....| +..+ +.
T Consensus 124 ~~~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~ 203 (328)
T 2qhx_A 124 TLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVA 203 (328)
T ss_dssp CHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSCC-------------CHHHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3 222 3689999999865432111111 11 11122 2222 22
Q ss_pred cCC------ccEEEEEccceeecCCCCccccCCCCCCCCChhHHHHHHHHHHHHHhhhh---cCCcEEEEEecceecCCC
Q 017914 154 NGH------LQWLGYLSSTGVYGHSGGAWVDEDYPANPTTELGRLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGR 224 (364)
Q Consensus 154 ~~~------~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~ 224 (364)
+.+ ..+||++||...+.. ..+...|+.+|...+.+.+.++.+ .|+++++|+||.+..+.
T Consensus 204 ~~~~~~~~~~g~IV~isS~~~~~~-----------~~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~- 271 (328)
T 2qhx_A 204 GTPAKHRGTNYSIINMVDAMTNQP-----------LLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVD- 271 (328)
T ss_dssp HSCGGGSCSCEEEEEECCTTTTSC-----------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCCC-
T ss_pred hcCCcCCCCCcEEEEECchhhccC-----------CCCcHHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCCc-
Confidence 334 579999999764422 123468999999999999888755 48999999999998876
Q ss_pred ChHHHHHHhcCcccccccccCCcccccccHHHHHHHHHHHccCC---CCCceEEEeCCCC
Q 017914 225 SSVDTIIKQLPLSEGQKMRRARQYTSRIHVDDICQVLSASIDKP---SAWNVYNVVDDDP 281 (364)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~---~~g~~~~i~~~~~ 281 (364)
..+....... ....+++ .-+...+|+|++++.++... -.|+++++.+|..
T Consensus 272 ~~~~~~~~~~--~~~~p~~-----~r~~~pedvA~~v~~l~s~~~~~itG~~i~vdGG~~ 324 (328)
T 2qhx_A 272 DMPPAVWEGH--RSKVPLY-----QRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYS 324 (328)
T ss_dssp CSCHHHHHHH--HTTCTTT-----TSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred cccHHHHHHH--HhhCCCC-----CCCCCHHHHHHHHHHHhCccccCccCcEEEECCCcc
Confidence 2222211110 0000100 02478999999999999643 3488999988743
|
| >1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.74 E-value=1.8e-17 Score=142.25 Aligned_cols=192 Identities=12% Similarity=0.041 Sum_probs=128.1
Q ss_pred CCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCChhhH--Hhh---------ccCceeeE
Q 017914 59 PNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETAL--MIL---------TTLKNYTH 126 (364)
Q Consensus 59 ~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~--~~~---------~~~d~v~~ 126 (364)
+++||||| +|+||++++++|+++|++|++++|+.++.. ....++.+|++|.+. ..+ ..+|.++|
T Consensus 3 ~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~----~~~~~~~~D~~~~~~~~~~~~~~~~~~~~g~id~lv~ 78 (236)
T 1ooe_A 3 SGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQA----DSNILVDGNKNWTEQEQSILEQTASSLQGSQVDGVFC 78 (236)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTS----SEEEECCTTSCHHHHHHHHHHHHHHHHTTCCEEEEEE
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecCccccc----cccEEEeCCCCCHHHHHHHHHHHHHHhCCCCCCEEEE
Confidence 57899999 999999999999999999999999876532 235677899999763 222 36899999
Q ss_pred EEEecCCCCC-CCCh----hhhHHHHHH------HHhhcC--CccEEEEEccceeecCCCCccccCCCCCCCCChhHHHH
Q 017914 127 LLVSIPPLEG-TGDP----MLKHGELLR------STLMNG--HLQWLGYLSSTGVYGHSGGAWVDEDYPANPTTELGRLR 193 (364)
Q Consensus 127 ~~~~~~~~~~-~~~~----~~~~~~~l~------~a~~~~--~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~~sK 193 (364)
+++....... .... ......|+. .++... ...++|++||...+.. ..+...|+.+|
T Consensus 79 ~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~-----------~~~~~~Y~~sK 147 (236)
T 1ooe_A 79 VAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAAMGP-----------TPSMIGYGMAK 147 (236)
T ss_dssp CCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSC-----------CTTBHHHHHHH
T ss_pred CCcccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEECchhhccC-----------CCCcHHHHHHH
Confidence 9875432111 1111 111222332 222211 1358999999765522 12346899999
Q ss_pred HHHHHHHHHhhhhc-----CCcEEEEEecceecCCCChHHHHHHhcCcccccccccCCcccccccHHHHHHHHHHHccCC
Q 017914 194 LSAEKGWLNLGRDL-----GISAQVFRLGGIYGPGRSSVDTIIKQLPLSEGQKMRRARQYTSRIHVDDICQVLSASIDKP 268 (364)
Q Consensus 194 ~~~E~~~~~~~~~~-----~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~ 268 (364)
...+.+.+.++.+. |+++++++||.+.++. .... . .. .....+++.+|+|++++.++..+
T Consensus 148 ~a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~---~~~~---~--~~-------~~~~~~~~~~dvA~~i~~~l~s~ 212 (236)
T 1ooe_A 148 AAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTPM---NRKW---M--PN-------ADHSSWTPLSFISEHLLKWTTET 212 (236)
T ss_dssp HHHHHHHHHHHSTTSSCCTTCEEEEEEESCBCCHH---HHHH---S--TT-------CCGGGCBCHHHHHHHHHHHHHCG
T ss_pred HHHHHHHHHHHHHhcccCCCeEEEEEecCcccCcc---hhhc---C--CC-------ccccccCCHHHHHHHHHHHHcCC
Confidence 99999999887554 5999999999987642 1111 0 00 01223578899999998776322
Q ss_pred ----CCCceEEEeCCC
Q 017914 269 ----SAWNVYNVVDDD 280 (364)
Q Consensus 269 ----~~g~~~~i~~~~ 280 (364)
..|+.+++.++.
T Consensus 213 ~~~~~~G~~~~v~gg~ 228 (236)
T 1ooe_A 213 SSRPSSGALLKITTEN 228 (236)
T ss_dssp GGCCCTTCEEEEEEET
T ss_pred CcccccccEEEEecCC
Confidence 348888887764
|
| >2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A* | Back alignment and structure |
|---|
Probab=99.74 E-value=4.4e-17 Score=143.08 Aligned_cols=205 Identities=16% Similarity=0.053 Sum_probs=133.2
Q ss_pred CCCCeEEEEc-C--ChhhHHHHHHHHhCCCEEEEEEeCch---hhhhhhh--CCceEEEccCChhhH--Hhh-------c
Q 017914 57 QSPNRMLILG-M--GFVGRIFAEKIKNQGWVVSGTCTNVM---KKKELEQ--SGFDVHLFNANETAL--MIL-------T 119 (364)
Q Consensus 57 ~~~~~vlVtG-t--G~iG~~l~~~L~~~g~~V~~~~r~~~---~~~~l~~--~~~~~~~~D~~~~~~--~~~-------~ 119 (364)
..+++||||| + |+||+++++.|+++|++|++++|+.+ ....+.. .++.++.+|++|.+. ..+ .
T Consensus 4 l~~k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 83 (275)
T 2pd4_A 4 LKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKDLG 83 (275)
T ss_dssp TTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHTS
T ss_pred CCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 4568999998 8 99999999999999999999999875 2222221 347889999999763 222 2
Q ss_pred cCceeeEEEEecCC---CCCC-----CChhhhHHH------HHHHHhhcC--CccEEEEEccceeecCCCCccccCCCCC
Q 017914 120 TLKNYTHLLVSIPP---LEGT-----GDPMLKHGE------LLRSTLMNG--HLQWLGYLSSTGVYGHSGGAWVDEDYPA 183 (364)
Q Consensus 120 ~~d~v~~~~~~~~~---~~~~-----~~~~~~~~~------~l~~a~~~~--~~~r~v~~Ss~~vy~~~~~~~~~E~~~~ 183 (364)
.+|+++|+++.... .... .+....... ++..++... ...++|++||...+.. .
T Consensus 84 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~-----------~ 152 (275)
T 2pd4_A 84 SLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNGASVLTLSYLGSTKY-----------M 152 (275)
T ss_dssp CEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSB-----------C
T ss_pred CCCEEEECCccCccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEecchhcCC-----------C
Confidence 67999999876432 0111 111111222 333333321 1258999998654321 1
Q ss_pred CCCChhHHHHHHHHHHHHHhhhhc---CCcEEEEEecceecCCCChH---HHHHHhcCcccccccccCCcccccccHHHH
Q 017914 184 NPTTELGRLRLSAEKGWLNLGRDL---GISAQVFRLGGIYGPGRSSV---DTIIKQLPLSEGQKMRRARQYTSRIHVDDI 257 (364)
Q Consensus 184 ~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilRp~~v~g~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dv 257 (364)
.+...|+.+|...+.+.+.++.+. |+++++++||.+.++..... ...... +....+ ...+.+.+|+
T Consensus 153 ~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~--~~~~~p------~~~~~~p~dv 224 (275)
T 2pd4_A 153 AHYNVMGLAKAALESAVRYLAVDLGKHHIRVNALSAGPIRTLASSGIADFRMILKW--NEINAP------LRKNVSLEEV 224 (275)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGGSTTHHHHHHH--HHHHST------TSSCCCHHHH
T ss_pred CCchhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCccccchhhhccccHHHHHH--HHhcCC------cCCCCCHHHH
Confidence 234679999999999999887654 89999999999988642211 111110 000000 1124679999
Q ss_pred HHHHHHHccCC---CCCceEEEeCCC
Q 017914 258 CQVLSASIDKP---SAWNVYNVVDDD 280 (364)
Q Consensus 258 a~~~~~~l~~~---~~g~~~~i~~~~ 280 (364)
|++++.++... ..|+.+++.+|.
T Consensus 225 a~~~~~l~s~~~~~~tG~~~~vdgg~ 250 (275)
T 2pd4_A 225 GNAGMYLLSSLSSGVSGEVHFVDAGY 250 (275)
T ss_dssp HHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred HHHHHHHhCccccCCCCCEEEECCCc
Confidence 99999998753 248889987764
|
| >3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.74 E-value=1.6e-16 Score=136.12 Aligned_cols=185 Identities=11% Similarity=-0.027 Sum_probs=124.1
Q ss_pred CCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhh---CCceEEEccCChhhH--Hhh-------ccCcee
Q 017914 58 SPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQ---SGFDVHLFNANETAL--MIL-------TTLKNY 124 (364)
Q Consensus 58 ~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~---~~~~~~~~D~~~~~~--~~~-------~~~d~v 124 (364)
.+++||||| +|+||++++++|+++|++|++++|+.++...+.. .++.++.+|++|.+. ..+ ..+|.+
T Consensus 2 s~k~vlVTGas~GIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~l 81 (235)
T 3l6e_A 2 SLGHIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLLGNAVIGIVADLAHHEDVDVAFAAAVEWGGLPELV 81 (235)
T ss_dssp -CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTSHHHHHHHHHHHHHHHCSCSEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCceEEECCCCCHHHHHHHHHHHHHhcCCCcEE
Confidence 357899999 9999999999999999999999998776554322 368899999999663 222 368999
Q ss_pred eEEEEecCCCCCC----CChhhhHHHHHHHH----------hhcCCccEEEEEccceeecCCCCccccCCCCCCCCChhH
Q 017914 125 THLLVSIPPLEGT----GDPMLKHGELLRST----------LMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANPTTELG 190 (364)
Q Consensus 125 ~~~~~~~~~~~~~----~~~~~~~~~~l~~a----------~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~ 190 (364)
+|+++........ .+.......|+... +++.+ .++|++||...+.... ....|+
T Consensus 82 vnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~~iv~isS~~~~~~~~-----------~~~~Y~ 149 (235)
T 3l6e_A 82 LHCAGTGEFGPVGVYTAEQIRRVMESNLVSTILVAQQTVRLIGERG-GVLANVLSSAAQVGKA-----------NESLYC 149 (235)
T ss_dssp EEECCCC------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTC-EEEEEECCEECCSSCS-----------SHHHHH
T ss_pred EECCCCCCCCChHhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CEEEEEeCHHhcCCCC-----------CCcHHH
Confidence 9999864322111 11111222333322 22333 3899999876543211 236799
Q ss_pred HHHHHHHHHHHHhhhh---cCCcEEEEEecceecCCCChHHHHHHhcCcccccccccCCcccccccHHHHHHHHHHHccC
Q 017914 191 RLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRSSVDTIIKQLPLSEGQKMRRARQYTSRIHVDDICQVLSASIDK 267 (364)
Q Consensus 191 ~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~ 267 (364)
.+|...+.+.+.++.+ .|++++.++||.+..+...... . .....+++.+|+|++++.++.+
T Consensus 150 asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~---~-------------~~~~~~~~pedvA~~v~~l~~~ 213 (235)
T 3l6e_A 150 ASKWGMRGFLESLRAELKDSPLRLVNLYPSGIRSEFWDNTD---H-------------VDPSGFMTPEDAAAYMLDALEA 213 (235)
T ss_dssp HHHHHHHHHHHHHHHHTTTSSEEEEEEEEEEECCCC---------------------------CBCHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHHHHHHhhccCCEEEEEeCCCccCcchhccC---C-------------CCCcCCCCHHHHHHHHHHHHhC
Confidence 9999999999988764 4799999999998665321100 0 0012458899999999999987
Q ss_pred CCC
Q 017914 268 PSA 270 (364)
Q Consensus 268 ~~~ 270 (364)
+..
T Consensus 214 ~~~ 216 (235)
T 3l6e_A 214 RSS 216 (235)
T ss_dssp CSS
T ss_pred CCC
Confidence 654
|
| >1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A* | Back alignment and structure |
|---|
Probab=99.74 E-value=1.5e-16 Score=140.34 Aligned_cols=211 Identities=13% Similarity=-0.005 Sum_probs=134.4
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchh-hhh----hhh--CCceEEEccCChhhH--Hh-------hc
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMK-KKE----LEQ--SGFDVHLFNANETAL--MI-------LT 119 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~-~~~----l~~--~~~~~~~~D~~~~~~--~~-------~~ 119 (364)
..+++||||| +|+||++++++|+++|++|++++|+... .+. +.. .++.++.+|++|.+. .. +.
T Consensus 27 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g 106 (283)
T 1g0o_A 27 LEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKIFG 106 (283)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHHhCCCeEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 4568999999 9999999999999999999999998643 121 222 357889999999663 22 23
Q ss_pred cCceeeEEEEecCCCCCC----CChhhhHHH------HHHHHhhc--CCccEEEEEccceeecCCCCccccCCCCCCCCC
Q 017914 120 TLKNYTHLLVSIPPLEGT----GDPMLKHGE------LLRSTLMN--GHLQWLGYLSSTGVYGHSGGAWVDEDYPANPTT 187 (364)
Q Consensus 120 ~~d~v~~~~~~~~~~~~~----~~~~~~~~~------~l~~a~~~--~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~ 187 (364)
.+|+++|+++........ .+....... ++..++.. .+..++|++||...+... ..+..
T Consensus 107 ~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~----------~~~~~ 176 (283)
T 1g0o_A 107 KLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSITGQAKA----------VPKHA 176 (283)
T ss_dssp CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCGGGTCSS----------CSSCH
T ss_pred CCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCeEEEEechhhccCC----------CCCCc
Confidence 689999999765332111 111111222 23333332 245799999997543211 11246
Q ss_pred hhHHHHHHHHHHHHHhhhh---cCCcEEEEEecceecCCCChHHHHHHhc-Cc----cc--cccccc--CCcccccccHH
Q 017914 188 ELGRLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRSSVDTIIKQL-PL----SE--GQKMRR--ARQYTSRIHVD 255 (364)
Q Consensus 188 ~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~-~~----~~--~~~~~~--~~~~~~~i~v~ 255 (364)
.|+.+|...|.+.+.++.+ .|+++++|+||.+.++.. ....... .. .. ...+.. ......+.+.+
T Consensus 177 ~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~ 253 (283)
T 1g0o_A 177 VYSGSKGAIETFARCMAIDMADKKITVNVVAPGGIKTDMY---HAVCREYIPNGENLSNEEVDEYAAVQWSPLRRVGLPI 253 (283)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHH---HHHGGGGSTTCTTCCHHHHHHHHHHHSCTTCSCBCHH
T ss_pred chHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccchhh---hhhhhhccccccccCHHHHHHHHhhcCCCCCCCcCHH
Confidence 8999999999999888754 489999999999976521 1110000 00 00 000000 01122357899
Q ss_pred HHHHHHHHHccCC---CCCceEEEeCCC
Q 017914 256 DICQVLSASIDKP---SAWNVYNVVDDD 280 (364)
Q Consensus 256 Dva~~~~~~l~~~---~~g~~~~i~~~~ 280 (364)
|+|++++.++... -.|+++++.+|.
T Consensus 254 dvA~~v~~l~s~~~~~itG~~i~vdgG~ 281 (283)
T 1g0o_A 254 DIARVVCFLASNDGGWVTGKVIGIDGGA 281 (283)
T ss_dssp HHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred HHHHHHHHHhCccccCcCCCEEEeCCCc
Confidence 9999999999754 348899988774
|
| >4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus} | Back alignment and structure |
|---|
Probab=99.74 E-value=7.7e-17 Score=141.09 Aligned_cols=196 Identities=10% Similarity=-0.002 Sum_probs=124.5
Q ss_pred CCCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhh---CCceEEEccCChhhH--Hhh-------ccCc
Q 017914 56 WQSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQ---SGFDVHLFNANETAL--MIL-------TTLK 122 (364)
Q Consensus 56 ~~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~---~~~~~~~~D~~~~~~--~~~-------~~~d 122 (364)
...+++||||| +|+||++++++|+++|++|++++|+.+....+.. .++.++.+|++|.+. ..+ ..+|
T Consensus 25 ~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD 104 (272)
T 4dyv_A 25 KTGKKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEIGDDALCVPTDVTDPDSVRALFTATVEKFGRVD 104 (272)
T ss_dssp ---CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTSCCEEEECCTTSHHHHHHHHHHHHHHHSCCC
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence 34568899999 9999999999999999999999998776554422 568899999999764 222 3789
Q ss_pred eeeEEEEecCCCCCCCC-----hhhhHHHHHHH----------HhhcCC--ccEEEEEccceeecCCCCccccCCCCCCC
Q 017914 123 NYTHLLVSIPPLEGTGD-----PMLKHGELLRS----------TLMNGH--LQWLGYLSSTGVYGHSGGAWVDEDYPANP 185 (364)
Q Consensus 123 ~v~~~~~~~~~~~~~~~-----~~~~~~~~l~~----------a~~~~~--~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~ 185 (364)
+++|+++.........+ .......|+.. .+++.+ ..++|++||...+.. ..+
T Consensus 105 ~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~-----------~~~ 173 (272)
T 4dyv_A 105 VLFNNAGTGAPAIPMEDLTFAQWKQVVDTNLTGPFLCTQEAFRVMKAQEPRGGRIINNGSISATSP-----------RPY 173 (272)
T ss_dssp EEEECCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCSSTTSC-----------CTT
T ss_pred EEEECCCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCCcEEEEECchhhcCC-----------CCC
Confidence 99999986543221111 11112223222 222332 468999999764422 223
Q ss_pred CChhHHHHHHHHHHHHHhhhh---cCCcEEEEEecceecCCCChHHHHHHhcCcccccccccCCcccccccHHHHHHHHH
Q 017914 186 TTELGRLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRSSVDTIIKQLPLSEGQKMRRARQYTSRIHVDDICQVLS 262 (364)
Q Consensus 186 ~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~ 262 (364)
...|+.+|.+.+.+.+.++.+ .|++++.++||.+..+....+ ........ .......+.+++|+|++++
T Consensus 174 ~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~---~~~~~~~~-----~~~~~~~~~~pedvA~~v~ 245 (272)
T 4dyv_A 174 SAPYTATKHAITGLTKSTSLDGRVHDIACGQIDIGNADTPMAQKM---KAGVPQAD-----LSIKVEPVMDVAHVASAVV 245 (272)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEEECC--------------------------------CHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHHhCccCEEEEEEEECcccChhhhhh---cccchhhh-----hcccccCCCCHHHHHHHHH
Confidence 468999999999999888754 489999999999877542211 11100000 0111234688999999999
Q ss_pred HHccCCCC
Q 017914 263 ASIDKPSA 270 (364)
Q Consensus 263 ~~l~~~~~ 270 (364)
.++.++..
T Consensus 246 fL~s~~~~ 253 (272)
T 4dyv_A 246 YMASLPLD 253 (272)
T ss_dssp HHHHSCTT
T ss_pred HHhCCCCc
Confidence 99997744
|
| >1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A* | Back alignment and structure |
|---|
Probab=99.73 E-value=3.1e-17 Score=141.22 Aligned_cols=194 Identities=12% Similarity=0.092 Sum_probs=129.9
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCChhhH--Hhh---------ccCcee
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETAL--MIL---------TTLKNY 124 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~--~~~---------~~~d~v 124 (364)
..+|+||||| +|+||++++++|+++|++|++++|+.+... ....++.+|++|.+. ..+ ..+|++
T Consensus 5 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~----~~~~~~~~D~~~~~~v~~~~~~~~~~~~~g~iD~l 80 (241)
T 1dhr_A 5 GEARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEA----SASVIVKMTDSFTEQADQVTAEVGKLLGDQKVDAI 80 (241)
T ss_dssp -CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTS----SEEEECCCCSCHHHHHHHHHHHHHHHHTTCCEEEE
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCChhhcc----CCcEEEEcCCCCHHHHHHHHHHHHHHhCCCCCCEE
Confidence 3457999999 999999999999999999999999876532 235677899999763 222 268999
Q ss_pred eEEEEecCCCCC-CCCh----hhhHHHHHHH------HhhcC--CccEEEEEccceeecCCCCccccCCCCCCCCChhHH
Q 017914 125 THLLVSIPPLEG-TGDP----MLKHGELLRS------TLMNG--HLQWLGYLSSTGVYGHSGGAWVDEDYPANPTTELGR 191 (364)
Q Consensus 125 ~~~~~~~~~~~~-~~~~----~~~~~~~l~~------a~~~~--~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~~ 191 (364)
+|+++....... .... ......|+.. ++... ...++|++||...+... .+...|+.
T Consensus 81 v~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~~~~Y~a 149 (241)
T 1dhr_A 81 LCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAALDGT-----------PGMIGYGM 149 (241)
T ss_dssp EECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCC-----------TTBHHHHH
T ss_pred EEcccccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCEEEEECCHHHccCC-----------CCchHHHH
Confidence 999875432111 1111 1112223322 22211 12589999997655321 23468999
Q ss_pred HHHHHHHHHHHhhhh-----cCCcEEEEEecceecCCCChHHHHHHhcCcccccccccCCcccccccHHHHHHHHHHHcc
Q 017914 192 LRLSAEKGWLNLGRD-----LGISAQVFRLGGIYGPGRSSVDTIIKQLPLSEGQKMRRARQYTSRIHVDDICQVLSASID 266 (364)
Q Consensus 192 sK~~~E~~~~~~~~~-----~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~ 266 (364)
+|...+.+.+.++.+ .|+++++++||.+-.+. .... .. . .....+++.+|+|++++.++.
T Consensus 150 sK~a~~~~~~~la~e~~~~~~gi~v~~v~PG~v~T~~---~~~~---~~--~-------~~~~~~~~~~~vA~~v~~l~~ 214 (241)
T 1dhr_A 150 AKGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTPM---NRKS---MP--E-------ADFSSWTPLEFLVETFHDWIT 214 (241)
T ss_dssp HHHHHHHHHHHHTSTTSSCCTTCEEEEEEESCEECHH---HHHH---ST--T-------SCGGGSEEHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHhccCCCCeEEEEEecCcccCcc---cccc---Cc--c-------hhhccCCCHHHHHHHHHHHhc
Confidence 999999999998754 46999999999886531 1111 00 0 112335788999999999997
Q ss_pred CCC---CCceEEEeCCC
Q 017914 267 KPS---AWNVYNVVDDD 280 (364)
Q Consensus 267 ~~~---~g~~~~i~~~~ 280 (364)
... .|+.+++.++.
T Consensus 215 ~~~~~~~G~~~~v~g~~ 231 (241)
T 1dhr_A 215 GNKRPNSGSLIQVVTTD 231 (241)
T ss_dssp TTTCCCTTCEEEEEEET
T ss_pred CCCcCccceEEEEeCCC
Confidence 653 38888887764
|
| >3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A* | Back alignment and structure |
|---|
Probab=99.73 E-value=6.3e-17 Score=143.50 Aligned_cols=204 Identities=13% Similarity=0.021 Sum_probs=137.0
Q ss_pred CCCCCeEEEEc-CC--hhhHHHHHHHHhCCCEEEEEEeCchhhhhhh-----hCCceEEEccCChhhH--Hhh-------
Q 017914 56 WQSPNRMLILG-MG--FVGRIFAEKIKNQGWVVSGTCTNVMKKKELE-----QSGFDVHLFNANETAL--MIL------- 118 (364)
Q Consensus 56 ~~~~~~vlVtG-tG--~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~-----~~~~~~~~~D~~~~~~--~~~------- 118 (364)
...+++||||| +| +||+++++.|+++|++|++++|+.+..+.+. ...+.++.+|++|.+. ..+
T Consensus 27 ~l~~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 106 (296)
T 3k31_A 27 LMEGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKRVDPLAESLGVKLTVPCDVSDAESVDNMFKVLAEEW 106 (296)
T ss_dssp TTTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred ccCCCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 34568999998 76 9999999999999999999999865433322 1456889999999764 222
Q ss_pred ccCceeeEEEEecCC----CC--C--CCChhhhHHHH------HHHHhhc--CCccEEEEEccceeecCCCCccccCCCC
Q 017914 119 TTLKNYTHLLVSIPP----LE--G--TGDPMLKHGEL------LRSTLMN--GHLQWLGYLSSTGVYGHSGGAWVDEDYP 182 (364)
Q Consensus 119 ~~~d~v~~~~~~~~~----~~--~--~~~~~~~~~~~------l~~a~~~--~~~~r~v~~Ss~~vy~~~~~~~~~E~~~ 182 (364)
..+|+++|+++.... .. . ..+.......| +..++.. ....++|++||...+..
T Consensus 107 g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~IV~isS~~~~~~----------- 175 (296)
T 3k31_A 107 GSLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTNGGSILTLSYYGAEKV----------- 175 (296)
T ss_dssp SCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGGTSC-----------
T ss_pred CCCCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCEEEEEEehhhccC-----------
Confidence 368999999876532 11 0 11111122223 3333321 12358999998765422
Q ss_pred CCCCChhHHHHHHHHHHHHHhhhh---cCCcEEEEEecceecCCCChHHH-------HHHhcCcccccccccCCcccccc
Q 017914 183 ANPTTELGRLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRSSVDT-------IIKQLPLSEGQKMRRARQYTSRI 252 (364)
Q Consensus 183 ~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~i 252 (364)
......|+.+|...+.+.+.++.+ .|+++++|+||.+..+....+.. +....+ ...+.
T Consensus 176 ~~~~~~Y~asKaal~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p------------~~r~~ 243 (296)
T 3k31_A 176 VPHYNVMGVCKAALEASVKYLAVDLGKQQIRVNAISAGPVRTLASSGISDFHYILTWNKYNSP------------LRRNT 243 (296)
T ss_dssp CTTTTHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCCCCSSCCSCHHHHHHHHHHHHHST------------TSSCC
T ss_pred CCCchhhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEECCCcCchhhcccchHHHHHHHHhcCC------------CCCCC
Confidence 123468999999999999988755 38999999999998875332211 111111 12246
Q ss_pred cHHHHHHHHHHHccCC---CCCceEEEeCCCCC
Q 017914 253 HVDDICQVLSASIDKP---SAWNVYNVVDDDPA 282 (364)
Q Consensus 253 ~v~Dva~~~~~~l~~~---~~g~~~~i~~~~~~ 282 (364)
..+|+|++++.++... -.|+++++.+|..+
T Consensus 244 ~pedvA~~v~fL~s~~a~~itG~~i~vdGG~~~ 276 (296)
T 3k31_A 244 TLDDVGGAALYLLSDLGRGTTGETVHVDCGYHV 276 (296)
T ss_dssp CHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred CHHHHHHHHHHHcCCccCCccCCEEEECCCccc
Confidence 7899999999999754 34899999888543
|
| >3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=99.73 E-value=2.7e-17 Score=146.28 Aligned_cols=199 Identities=8% Similarity=-0.071 Sum_probs=127.8
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhh------hCCceEEEccCChhhH--Hhh-------cc
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELE------QSGFDVHLFNANETAL--MIL-------TT 120 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~------~~~~~~~~~D~~~~~~--~~~-------~~ 120 (364)
..+++||||| +|+||++++++|+++|++|++++|+.++...+. ...+.++.+|++|.+. ..+ ..
T Consensus 29 l~gk~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 108 (301)
T 3tjr_A 29 FDGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGFDAHGVVCDVRHLDEMVRLADEAFRLLGG 108 (301)
T ss_dssp STTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhCCC
Confidence 4568999999 999999999999999999999999887655432 1367889999999764 222 37
Q ss_pred CceeeEEEEecCCCCCCC----ChhhhHHHH------HHHHh----hcCC-ccEEEEEccceeecCCCCccccCCCCCCC
Q 017914 121 LKNYTHLLVSIPPLEGTG----DPMLKHGEL------LRSTL----MNGH-LQWLGYLSSTGVYGHSGGAWVDEDYPANP 185 (364)
Q Consensus 121 ~d~v~~~~~~~~~~~~~~----~~~~~~~~~------l~~a~----~~~~-~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~ 185 (364)
+|+++|+++......... +.......| +..++ .+.+ ..++|++||...+... ..
T Consensus 109 id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~ 177 (301)
T 3tjr_A 109 VDVVFSNAGIVVAGPLAQMNHDDWRWVIDIDLWGSIHAVEAFLPRLLEQGTGGHIAFTASFAGLVPN-----------AG 177 (301)
T ss_dssp CSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSCC-----------TT
T ss_pred CCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcCCC-----------CC
Confidence 899999998654321111 111112222 22222 2333 5689999997654221 23
Q ss_pred CChhHHHHHHHHHHHHHhhhh---cCCcEEEEEecceecCCCChHHHHHHhcCc--c----cccccccCCcccccccHHH
Q 017914 186 TTELGRLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRSSVDTIIKQLPL--S----EGQKMRRARQYTSRIHVDD 256 (364)
Q Consensus 186 ~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~--~----~~~~~~~~~~~~~~i~v~D 256 (364)
...|+.+|.+.+.+.+.++.+ .|+++++|+||.+..+. .......... . .....+.......+++++|
T Consensus 178 ~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ped 254 (301)
T 3tjr_A 178 LGTYGVAKYGVVGLAETLAREVKPNGIGVSVLCPMVVETKL---VSNSERIRGADYGMSATPEGAFGPLPTQDESVSADD 254 (301)
T ss_dssp BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEECCSCCCSSH---HHHHHHHC----------------------CCCHHH
T ss_pred chHHHHHHHHHHHHHHHHHHHhcccCcEEEEEECCcccccc---ccccccccchhhccccChhhhccccccccCCCCHHH
Confidence 468999999999998888654 48999999999987643 1111111000 0 0011122223456799999
Q ss_pred HHHHHHHHccCCC
Q 017914 257 ICQVLSASIDKPS 269 (364)
Q Consensus 257 va~~~~~~l~~~~ 269 (364)
+|++++.+++++.
T Consensus 255 vA~~i~~~l~~~~ 267 (301)
T 3tjr_A 255 VARLTADAILANR 267 (301)
T ss_dssp HHHHHHHHHHHTC
T ss_pred HHHHHHHHHhcCC
Confidence 9999999998763
|
| >4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum} | Back alignment and structure |
|---|
Probab=99.73 E-value=6.1e-17 Score=142.01 Aligned_cols=202 Identities=8% Similarity=0.004 Sum_probs=135.6
Q ss_pred CCCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhh------hCCceEEEccCChhhH--Hhh------cc
Q 017914 56 WQSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELE------QSGFDVHLFNANETAL--MIL------TT 120 (364)
Q Consensus 56 ~~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~------~~~~~~~~~D~~~~~~--~~~------~~ 120 (364)
...++++|||| +|+||++++++|+++|++|++++|+.+....+. ...+.++.+|++|.+. ..+ ..
T Consensus 30 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~g~ 109 (275)
T 4imr_A 30 GLRGRTALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIASGGTAQELAGDLSEAGAGTDLIERAEAIAP 109 (275)
T ss_dssp CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHHHTTCCEEEEECCTTSTTHHHHHHHHHHHHSC
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHhCC
Confidence 35678999999 999999999999999999999999876654432 2467889999999653 222 36
Q ss_pred CceeeEEEEecCCCCCCC----ChhhhHHHH------HHHH----hhcCCccEEEEEccceeecCCCCccccCCCCCCCC
Q 017914 121 LKNYTHLLVSIPPLEGTG----DPMLKHGEL------LRST----LMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANPT 186 (364)
Q Consensus 121 ~d~v~~~~~~~~~~~~~~----~~~~~~~~~------l~~a----~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~ 186 (364)
+|+++|+++......... +.......| +..+ +++.+..++|++||...+. +..+.
T Consensus 110 iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~-----------~~~~~ 178 (275)
T 4imr_A 110 VDILVINASAQINATLSALTPNDLAFQLAVNLGSTVDMLQSALPKMVARKWGRVVSIGSINQLR-----------PKSVV 178 (275)
T ss_dssp CCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS-----------CCTTB
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHhCC-----------CCCCc
Confidence 899999987543322111 111112222 2222 2344567999999976543 12234
Q ss_pred ChhHHHHHHHHHHHHHhhhhc---CCcEEEEEecceecCCCChH--------HHHHHhcCcccccccccCCcccccccHH
Q 017914 187 TELGRLRLSAEKGWLNLGRDL---GISAQVFRLGGIYGPGRSSV--------DTIIKQLPLSEGQKMRRARQYTSRIHVD 255 (364)
Q Consensus 187 ~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilRp~~v~g~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~i~v~ 255 (364)
..|+.+|...+.+.+.++.+. |++++.++||.+..+..... ..+.... ....-+...+
T Consensus 179 ~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~-----------~p~~r~~~pe 247 (275)
T 4imr_A 179 TAYAATKAAQHNLIQSQARDFAGDNVLLNTLAPGLVDTDRNADRRAQDPEGWDEYVRTL-----------NWMGRAGRPE 247 (275)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSHHHHHHHHHCHHHHHHHHHHH-----------STTCSCBCGG
T ss_pred hhhHHHHHHHHHHHHHHHHHhcccCcEEEEEEeccccCcccccccccChHHHHHHHhhc-----------CccCCCcCHH
Confidence 579999999999999887653 89999999999876421100 0011110 0011236789
Q ss_pred HHHHHHHHHccCC---CCCceEEEeCC
Q 017914 256 DICQVLSASIDKP---SAWNVYNVVDD 279 (364)
Q Consensus 256 Dva~~~~~~l~~~---~~g~~~~i~~~ 279 (364)
|+|++++.++... -.|+++++.+|
T Consensus 248 dvA~~v~fL~s~~a~~itG~~i~vdGG 274 (275)
T 4imr_A 248 EMVGAALFLASEACSFMTGETIFLTGG 274 (275)
T ss_dssp GGHHHHHHHHSGGGTTCCSCEEEESSC
T ss_pred HHHHHHHHHcCcccCCCCCCEEEeCCC
Confidence 9999999998764 24899998776
|
| >3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris} | Back alignment and structure |
|---|
Probab=99.73 E-value=5.3e-17 Score=140.60 Aligned_cols=195 Identities=10% Similarity=0.029 Sum_probs=121.2
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhh------CCceEEEccCChhhH--Hhh------ccC
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQ------SGFDVHLFNANETAL--MIL------TTL 121 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~------~~~~~~~~D~~~~~~--~~~------~~~ 121 (364)
..+++||||| +|+||++++++|+++|++|++++|+.++...+.. .++.++.+|++|.+. ..+ ..+
T Consensus 5 ~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~g~i 84 (252)
T 3h7a_A 5 PRNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAGGRIVARSLDARNEDEVTAFLNAADAHAPL 84 (252)
T ss_dssp CCSCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHSCE
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECcCCCHHHHHHHHHHHHhhCCc
Confidence 4568999999 9999999999999999999999998876554321 357889999999764 222 267
Q ss_pred ceeeEEEEecCCCCCCCC----hhhhHHHHH----------HHHhhcCCccEEEEEccceeecCCCCccccCCCCCCCCC
Q 017914 122 KNYTHLLVSIPPLEGTGD----PMLKHGELL----------RSTLMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANPTT 187 (364)
Q Consensus 122 d~v~~~~~~~~~~~~~~~----~~~~~~~~l----------~~a~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~ 187 (364)
|+++|+++.......... .......|+ +..+++.+..++|++||...+.. .....
T Consensus 85 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-----------~~~~~ 153 (252)
T 3h7a_A 85 EVTIFNVGANVNFPILETTDRVFRKVWEMACWAGFVSGRESARLMLAHGQGKIFFTGATASLRG-----------GSGFA 153 (252)
T ss_dssp EEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTCC-----------CTTCH
T ss_pred eEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHHcCC-----------CCCCc
Confidence 999999876543211111 111112222 22233445579999998764422 12346
Q ss_pred hhHHHHHHHHHHHHHhhhh---cCCcE-EEEEecceecCCCChHHHHHHhcCcccccccccCCcccccccHHHHHHHHHH
Q 017914 188 ELGRLRLSAEKGWLNLGRD---LGISA-QVFRLGGIYGPGRSSVDTIIKQLPLSEGQKMRRARQYTSRIHVDDICQVLSA 263 (364)
Q Consensus 188 ~Y~~sK~~~E~~~~~~~~~---~~~~~-~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~ 263 (364)
.|+.+|.+.+.+.+.++.+ .|+++ +++.||.+..+..... ... .. .......... +.+++|+|++++.
T Consensus 154 ~Y~asKaa~~~l~~~la~e~~~~gi~v~n~v~PG~v~T~~~~~~---~~~-~~---~~~~~~~~~~-~~~pedvA~~~~~ 225 (252)
T 3h7a_A 154 AFASAKFGLRAVAQSMARELMPKNIHVAHLIIDSGVDTAWVRER---REQ-MF---GKDALANPDL-LMPPAAVAGAYWQ 225 (252)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-----------------------------------CCHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHhhhcCCEEEEEecCCccCChhhhcc---chh-hh---hhhhhcCCcc-CCCHHHHHHHHHH
Confidence 8999999999999888754 47899 8999998876532111 000 00 0001111122 6899999999999
Q ss_pred HccCCCC
Q 017914 264 SIDKPSA 270 (364)
Q Consensus 264 ~l~~~~~ 270 (364)
++..+..
T Consensus 226 l~s~~~~ 232 (252)
T 3h7a_A 226 LYQQPKS 232 (252)
T ss_dssp HHHCCGG
T ss_pred HHhCchh
Confidence 9987644
|
| >3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A* | Back alignment and structure |
|---|
Probab=99.73 E-value=2.1e-16 Score=135.49 Aligned_cols=197 Identities=8% Similarity=-0.078 Sum_probs=129.1
Q ss_pred CCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhh-------hCCceEEEccCChhhH--Hhh-------ccC
Q 017914 59 PNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELE-------QSGFDVHLFNANETAL--MIL-------TTL 121 (364)
Q Consensus 59 ~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~-------~~~~~~~~~D~~~~~~--~~~-------~~~ 121 (364)
+++||||| +|+||++++++|+++|++|++++|+.++...+. ...+.++.+|++|.+. ..+ ..+
T Consensus 2 ~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i 81 (235)
T 3l77_A 2 MKVAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGVEVFYHHLDVSKAESVEEFSKKVLERFGDV 81 (235)
T ss_dssp CCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHCC-HHHHHSSC
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCeEEEEEeccCCHHHHHHHHHHHHHhcCCC
Confidence 57899999 999999999999999999999999877654321 2467889999999764 222 368
Q ss_pred ceeeEEEEecCCCCCCC----ChhhhHHHH------HHHHhh---cCCccEEEEEccceeecCCCCccccCCCCCCCCCh
Q 017914 122 KNYTHLLVSIPPLEGTG----DPMLKHGEL------LRSTLM---NGHLQWLGYLSSTGVYGHSGGAWVDEDYPANPTTE 188 (364)
Q Consensus 122 d~v~~~~~~~~~~~~~~----~~~~~~~~~------l~~a~~---~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~ 188 (364)
|.++|+++......... +.......| +..++. ..+..++|++||...+.. ......
T Consensus 82 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~ii~~sS~~~~~~-----------~~~~~~ 150 (235)
T 3l77_A 82 DVVVANAGLGYFKRLEELSEEEFHEMIEVNLLGVWRTLKAFLDSLKRTGGLALVTTSDVSARL-----------IPYGGG 150 (235)
T ss_dssp SEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGSSC-----------CTTCHH
T ss_pred CEEEECCccccccCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcEEEEecchhccc-----------CCCcch
Confidence 99999998654322111 111112222 222221 112346777766543211 112357
Q ss_pred hHHHHHHHHHHHHHhhh-hcCCcEEEEEecceecCCCChHHHHHHhcCcccccccccCCcccccccHHHHHHHHHHHccC
Q 017914 189 LGRLRLSAEKGWLNLGR-DLGISAQVFRLGGIYGPGRSSVDTIIKQLPLSEGQKMRRARQYTSRIHVDDICQVLSASIDK 267 (364)
Q Consensus 189 Y~~sK~~~E~~~~~~~~-~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~ 267 (364)
|+.+|...+.+.+.+.. ..+++++.++||.+..+.... ... ......++..+|+|++++.+++.
T Consensus 151 Y~~sKaa~~~~~~~l~~~~~~i~v~~v~PG~v~T~~~~~---------~~~------~~~~~~~~~p~dva~~v~~l~~~ 215 (235)
T 3l77_A 151 YVSTKWAARALVRTFQIENPDVRFFELRPGAVDTYFGGS---------KPG------KPKEKGYLKPDEIAEAVRCLLKL 215 (235)
T ss_dssp HHHHHHHHHHHHHHHHHHCTTSEEEEEEECSBSSSTTTC---------CSC------CCGGGTCBCHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHHHHHhhcCCCeEEEEEeCCccccccccc---------cCC------cccccCCCCHHHHHHHHHHHHcC
Confidence 99999999999988743 348999999999886543111 000 01112468899999999999988
Q ss_pred CCC---CceEEEeCCCC
Q 017914 268 PSA---WNVYNVVDDDP 281 (364)
Q Consensus 268 ~~~---g~~~~i~~~~~ 281 (364)
+.. |++....+++.
T Consensus 216 ~~~~~~~~~~~~~~~~~ 232 (235)
T 3l77_A 216 PKDVRVEELMLRSVYQR 232 (235)
T ss_dssp CTTCCCCEEEECCTTSC
T ss_pred CCCCccceEEEeecccC
Confidence 743 66665555443
|
| >3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A* | Back alignment and structure |
|---|
Probab=99.73 E-value=8.3e-17 Score=140.65 Aligned_cols=206 Identities=11% Similarity=0.026 Sum_probs=135.1
Q ss_pred CCCCeEEEEc-CCh--hhHHHHHHHHhCCCEEEEEEeCchhhhhhhh-------CCceEEEccCChhhH--Hhh------
Q 017914 57 QSPNRMLILG-MGF--VGRIFAEKIKNQGWVVSGTCTNVMKKKELEQ-------SGFDVHLFNANETAL--MIL------ 118 (364)
Q Consensus 57 ~~~~~vlVtG-tG~--iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~-------~~~~~~~~D~~~~~~--~~~------ 118 (364)
..+++||||| +|+ ||++++++|+++|++|++++|+....+.+.+ .++.++.+|++|.+. ..+
T Consensus 5 l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~ 84 (266)
T 3oig_A 5 LEGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEKSVHELAGTLDRNDSIILPCDVTNDAEIETCFASIKEQ 84 (266)
T ss_dssp CTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHTSSSCCCEEEECCCSSSHHHHHHHHHHHHH
T ss_pred cCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHHhcCCCCceEEeCCCCCHHHHHHHHHHHHHH
Confidence 4568999999 888 9999999999999999999998654333221 268899999999663 222
Q ss_pred -ccCceeeEEEEecCCC---CCCC-----ChhhhHHH------HHHHHhhcC--CccEEEEEccceeecCCCCccccCCC
Q 017914 119 -TTLKNYTHLLVSIPPL---EGTG-----DPMLKHGE------LLRSTLMNG--HLQWLGYLSSTGVYGHSGGAWVDEDY 181 (364)
Q Consensus 119 -~~~d~v~~~~~~~~~~---~~~~-----~~~~~~~~------~l~~a~~~~--~~~r~v~~Ss~~vy~~~~~~~~~E~~ 181 (364)
..+|.++|+++..... .... +....... ++..++... ...++|++||...+..
T Consensus 85 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~---------- 154 (266)
T 3oig_A 85 VGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTEGGSIVTLTYLGGELV---------- 154 (266)
T ss_dssp HSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGGTSC----------
T ss_pred hCCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCCCceEEEEeccccccc----------
Confidence 3689999998765421 1111 11111112 233333321 2358999998765422
Q ss_pred CCCCCChhHHHHHHHHHHHHHhhhh---cCCcEEEEEecceecCCCCh---HHHHHHhcCcccccccccCCcccccccHH
Q 017914 182 PANPTTELGRLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRSS---VDTIIKQLPLSEGQKMRRARQYTSRIHVD 255 (364)
Q Consensus 182 ~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~i~v~ 255 (364)
......|+.+|.+.+.+.+.++.+ .|+++++++||.+..+.... ........ .. ......+.+.+
T Consensus 155 -~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~--~~------~~~~~~~~~p~ 225 (266)
T 3oig_A 155 -MPNYNVMGVAKASLDASVKYLAADLGKENIRVNSISAGPIRTLSAKGISDFNSILKDI--EE------RAPLRRTTTPE 225 (266)
T ss_dssp -CTTTHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTTCTTHHHHHHHH--HH------HSTTSSCCCHH
T ss_pred -CCCcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccccccccccchHHHHHHH--Hh------cCCCCCCCCHH
Confidence 123468999999999999888754 47999999999998753211 11111110 00 00112347899
Q ss_pred HHHHHHHHHccCC---CCCceEEEeCCCC
Q 017914 256 DICQVLSASIDKP---SAWNVYNVVDDDP 281 (364)
Q Consensus 256 Dva~~~~~~l~~~---~~g~~~~i~~~~~ 281 (364)
|+|++++.++... -.|+++++.+|..
T Consensus 226 dva~~v~~l~s~~~~~~tG~~i~vdGG~~ 254 (266)
T 3oig_A 226 EVGDTAAFLFSDMSRGITGENLHVDSGFH 254 (266)
T ss_dssp HHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred HHHHHHHHHcCCchhcCcCCEEEECCCeE
Confidence 9999999999754 3489999988743
|
| >3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus} | Back alignment and structure |
|---|
Probab=99.73 E-value=1e-16 Score=136.89 Aligned_cols=185 Identities=11% Similarity=-0.009 Sum_probs=121.8
Q ss_pred CCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhh---CCceEEEccCChhhH--Hhhcc----CceeeEEE
Q 017914 59 PNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQ---SGFDVHLFNANETAL--MILTT----LKNYTHLL 128 (364)
Q Consensus 59 ~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~---~~~~~~~~D~~~~~~--~~~~~----~d~v~~~~ 128 (364)
||+||||| +|+||++++++|+++|++|++++|+.++...+.. ..+.++.+|+++.+. ..++. .|.++|++
T Consensus 1 Mk~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~d~lv~~A 80 (230)
T 3guy_A 1 MSLIVITGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTNCLSNNVGYRARDLASHQEVEQLFEQLDSIPSTVVHSA 80 (230)
T ss_dssp --CEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTCSSCCCEEECCTTCHHHHHHHHHSCSSCCSEEEECC
T ss_pred CCEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhccCeEeecCCCHHHHHHHHHHHhhcCCEEEEeC
Confidence 46899999 9999999999999999999999999877655432 467899999999764 33333 38999998
Q ss_pred EecCCCCCCCC----hhhhHHHHHHHH------h----hcCCccEEEEEccceeecCCCCccccCCCCCCCCChhHHHHH
Q 017914 129 VSIPPLEGTGD----PMLKHGELLRST------L----MNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANPTTELGRLRL 194 (364)
Q Consensus 129 ~~~~~~~~~~~----~~~~~~~~l~~a------~----~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~~sK~ 194 (364)
+.......... .......|+... + ++.+. ++|++||...+.. ..+...|+.+|.
T Consensus 81 g~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~-~iv~isS~~~~~~-----------~~~~~~Y~asKa 148 (230)
T 3guy_A 81 GSGYFGLLQEQDPEQIQTLIENNLSSAINVLRELVKRYKDQPV-NVVMIMSTAAQQP-----------KAQESTYCAVKW 148 (230)
T ss_dssp CCCCCSCGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCC-EEEEECCGGGTSC-----------CTTCHHHHHHHH
T ss_pred CcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC-eEEEEeecccCCC-----------CCCCchhHHHHH
Confidence 75433221111 111222233222 2 23333 8999998765422 223468999999
Q ss_pred HHHHHHHHhhhhc---CCcEEEEEecceecCCCChHHHHHHhcCcccccccccCCcccccccHHHHHHHHHHHccCCCC
Q 017914 195 SAEKGWLNLGRDL---GISAQVFRLGGIYGPGRSSVDTIIKQLPLSEGQKMRRARQYTSRIHVDDICQVLSASIDKPSA 270 (364)
Q Consensus 195 ~~E~~~~~~~~~~---~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~~ 270 (364)
+.+.+.+.++.+. |++++.++||.+..+.... ... ......+++++|+|++++.++.++..
T Consensus 149 a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~---~~~------------~~~~~~~~~~~dvA~~i~~l~~~~~~ 212 (230)
T 3guy_A 149 AVKGLIESVRLELKGKPMKIIAVYPGGMATEFWET---SGK------------SLDTSSFMSAEDAALMIHGALANIGN 212 (230)
T ss_dssp HHHHHHHHHHHHTTTSSCEEEEEEECCC-------------------------------CCCHHHHHHHHHHHCCEETT
T ss_pred HHHHHHHHHHHHHHhcCeEEEEEECCcccChHHHh---cCC------------CCCcccCCCHHHHHHHHHHHHhCcCC
Confidence 9999999887654 7999999999887643111 000 01123468899999999999986644
|
| >3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.73 E-value=3.1e-16 Score=137.76 Aligned_cols=212 Identities=10% Similarity=-0.021 Sum_probs=135.7
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeC-------------chhhhhh----h--hCCceEEEccCChhhH-
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTN-------------VMKKKEL----E--QSGFDVHLFNANETAL- 115 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~-------------~~~~~~l----~--~~~~~~~~~D~~~~~~- 115 (364)
..++++|||| +|+||++++++|+++|++|++++|+ .+..... . ...+.++.+|++|.+.
T Consensus 9 l~~k~~lVTGas~GIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v 88 (277)
T 3tsc_A 9 LEGRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANRRIVAAVVDTRDFDRL 88 (277)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHH
T ss_pred cCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHH
Confidence 4568999999 9999999999999999999999983 2222221 1 1457889999999763
Q ss_pred -Hhh-------ccCceeeEEEEecCCCCCCC----ChhhhHHHHH------HHH----hhcCC-ccEEEEEccceeecCC
Q 017914 116 -MIL-------TTLKNYTHLLVSIPPLEGTG----DPMLKHGELL------RST----LMNGH-LQWLGYLSSTGVYGHS 172 (364)
Q Consensus 116 -~~~-------~~~d~v~~~~~~~~~~~~~~----~~~~~~~~~l------~~a----~~~~~-~~r~v~~Ss~~vy~~~ 172 (364)
..+ ..+|+++|+++......-.. +.......|+ ..+ +.+.+ ..++|++||...+...
T Consensus 89 ~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~ 168 (277)
T 3tsc_A 89 RKVVDDGVAALGRLDIIVANAGVAAPQAWDDITPEDFRDVMDINVTGTWNTVMAGAPRIIEGGRGGSIILISSAAGMKMQ 168 (277)
T ss_dssp HHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCC
T ss_pred HHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCEEEEEccHhhCCCC
Confidence 222 36899999998654322111 1111122232 222 22222 4689999997654221
Q ss_pred CCccccCCCCCCCCChhHHHHHHHHHHHHHhhhh---cCCcEEEEEecceecCCCCh--HHHHHHh-cCccc-ccccccC
Q 017914 173 GGAWVDEDYPANPTTELGRLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRSS--VDTIIKQ-LPLSE-GQKMRRA 245 (364)
Q Consensus 173 ~~~~~~E~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~--~~~~~~~-~~~~~-~~~~~~~ 245 (364)
.....|+.+|...+.+.+.++.+ .|++++.|+||.+..+.... ....... ..... .......
T Consensus 169 -----------~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (277)
T 3tsc_A 169 -----------PFMIHYTASKHAVTGLARAFAAELGKHSIRVNSVHPGPVNTPMGSGDMVTAVGQAMETNPQLSHVLTPF 237 (277)
T ss_dssp -----------SSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSGGGSHHHHHHHHHHHHTCGGGTTTTCCS
T ss_pred -----------CCchhhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeCCCcCCcccchhhhhhhhcccccHHHHHHhhhc
Confidence 13467999999999999988765 48999999999998764321 1111110 00000 0011111
Q ss_pred CcccccccHHHHHHHHHHHccCC---CCCceEEEeCCC
Q 017914 246 RQYTSRIHVDDICQVLSASIDKP---SAWNVYNVVDDD 280 (364)
Q Consensus 246 ~~~~~~i~v~Dva~~~~~~l~~~---~~g~~~~i~~~~ 280 (364)
...-+.+++|+|++++.++... -.|+++++.+|.
T Consensus 238 -~p~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~ 274 (277)
T 3tsc_A 238 -LPDWVAEPEDIADTVCWLASDESRKVTAAQIPVDQGS 274 (277)
T ss_dssp -SSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred -cCCCCCCHHHHHHHHHHHhCccccCCcCCEEeeCCCc
Confidence 1113689999999999999764 348999998774
|
| >3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=99.73 E-value=3.4e-17 Score=139.19 Aligned_cols=193 Identities=11% Similarity=0.035 Sum_probs=129.5
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCChhhH--Hh---hccCceeeEEEEe
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETAL--MI---LTTLKNYTHLLVS 130 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~--~~---~~~~d~v~~~~~~ 130 (364)
..++++|||| +|+||++++++|+++|++|++++|+.+ +|++|.+. .. +..+|.++|+++.
T Consensus 4 ~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~--------------~D~~~~~~v~~~~~~~g~id~lv~nAg~ 69 (223)
T 3uce_A 4 SDKTVYVVLGGTSGIGAELAKQLESEHTIVHVASRQTG--------------LDISDEKSVYHYFETIGAFDHLIVTAGS 69 (223)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHCSTTEEEEEESGGGT--------------CCTTCHHHHHHHHHHHCSEEEEEECCCC
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEecCCcc--------------cCCCCHHHHHHHHHHhCCCCEEEECCCC
Confidence 3457899999 999999999999999999999999754 79998764 22 3468999999886
Q ss_pred cCCCCCCCC-----hhhhHHHHHH------HHhhcC--CccEEEEEccceeecCCCCccccCCCCCCCCChhHHHHHHHH
Q 017914 131 IPPLEGTGD-----PMLKHGELLR------STLMNG--HLQWLGYLSSTGVYGHSGGAWVDEDYPANPTTELGRLRLSAE 197 (364)
Q Consensus 131 ~~~~~~~~~-----~~~~~~~~l~------~a~~~~--~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~~sK~~~E 197 (364)
........+ .......|+. .++... ...++|++||...+.. ..+...|+.+|...+
T Consensus 70 ~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~~sS~~~~~~-----------~~~~~~Y~asK~a~~ 138 (223)
T 3uce_A 70 YAPAGKVVDVEVTQAKYAFDTKFWGAVLAAKHGARYLKQGGSITLTSGMLSRKV-----------VANTYVKAAINAAIE 138 (223)
T ss_dssp CCCCSCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGEEEEEEEEEECCGGGTSC-----------CTTCHHHHHHHHHHH
T ss_pred CCCCCCcccCCHHHHHhhheeeeeeHHHHHHHHHhhccCCeEEEEecchhhccC-----------CCCchHHHHHHHHHH
Confidence 533222111 1112223333 332221 1248999998765432 223468999999999
Q ss_pred HHHHHhhhhcC-CcEEEEEecceecCCCChH-----HHHHHhcCcccccccccCCcccccccHHHHHHHHHHHccCCC-C
Q 017914 198 KGWLNLGRDLG-ISAQVFRLGGIYGPGRSSV-----DTIIKQLPLSEGQKMRRARQYTSRIHVDDICQVLSASIDKPS-A 270 (364)
Q Consensus 198 ~~~~~~~~~~~-~~~~ilRp~~v~g~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~-~ 270 (364)
.+.+.++.+.+ ++++.++||.+.++..... ..+... +. .......+.+++|+|++++.+++... .
T Consensus 139 ~~~~~la~e~~~i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~--~~------~~~~~~~~~~~~dvA~~~~~l~~~~~~t 210 (223)
T 3uce_A 139 ATTKVLAKELAPIRVNAISPGLTKTEAYKGMNADDRDAMYQR--TQ------SHLPVGKVGEASDIAMAYLFAIQNSYMT 210 (223)
T ss_dssp HHHHHHHHHHTTSEEEEEEECSBCSGGGTTSCHHHHHHHHHH--HH------HHSTTCSCBCHHHHHHHHHHHHHCTTCC
T ss_pred HHHHHHHHhhcCcEEEEEEeCCCcchhhhhcchhhHHHHHHH--Hh------hcCCCCCccCHHHHHHHHHHHccCCCCC
Confidence 99999887654 9999999999987642111 111110 00 00112345789999999999998653 4
Q ss_pred CceEEEeCCCCC
Q 017914 271 WNVYNVVDDDPA 282 (364)
Q Consensus 271 g~~~~i~~~~~~ 282 (364)
|+++++.+|..+
T Consensus 211 G~~i~vdgG~~~ 222 (223)
T 3uce_A 211 GTVIDVDGGALL 222 (223)
T ss_dssp SCEEEESTTGGG
T ss_pred CcEEEecCCeec
Confidence 899999887543
|
| >3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A* | Back alignment and structure |
|---|
Probab=99.73 E-value=1.4e-16 Score=141.10 Aligned_cols=203 Identities=14% Similarity=0.034 Sum_probs=133.8
Q ss_pred CCCCCeEEEEc-CCh--hhHHHHHHHHhCCCEEEEEEeCchhhhhhh-----hCCceEEEccCChhhH--Hhh-------
Q 017914 56 WQSPNRMLILG-MGF--VGRIFAEKIKNQGWVVSGTCTNVMKKKELE-----QSGFDVHLFNANETAL--MIL------- 118 (364)
Q Consensus 56 ~~~~~~vlVtG-tG~--iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~-----~~~~~~~~~D~~~~~~--~~~------- 118 (364)
...+++||||| +|+ ||+++++.|+++|++|++++|+....+.+. ..++.++.+|++|.+. ..+
T Consensus 28 ~l~gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 107 (293)
T 3grk_A 28 LLQGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDALKKRVEPLAEELGAFVAGHCDVADAASIDAVFETLEKKW 107 (293)
T ss_dssp TTTTCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSHHHHHHHHHHHHHHTCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred cCCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCceEEECCCCCHHHHHHHHHHHHHhc
Confidence 35678999999 888 999999999999999999999854332221 1457889999999764 222
Q ss_pred ccCceeeEEEEecCC---CCCC-----CChhhhHHHH------HHHHhhc--CCccEEEEEccceeecCCCCccccCCCC
Q 017914 119 TTLKNYTHLLVSIPP---LEGT-----GDPMLKHGEL------LRSTLMN--GHLQWLGYLSSTGVYGHSGGAWVDEDYP 182 (364)
Q Consensus 119 ~~~d~v~~~~~~~~~---~~~~-----~~~~~~~~~~------l~~a~~~--~~~~r~v~~Ss~~vy~~~~~~~~~E~~~ 182 (364)
..+|+++|+++.... .... .+.......| +..++.. ....++|++||...+..
T Consensus 108 g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~Iv~isS~~~~~~----------- 176 (293)
T 3grk_A 108 GKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMADGGSILTLTYYGAEKV----------- 176 (293)
T ss_dssp SCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTTCEEEEEEECGGGTSB-----------
T ss_pred CCCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEeehhhccC-----------
Confidence 368999999876531 1111 1111112222 2232221 12458999998765432
Q ss_pred CCCCChhHHHHHHHHHHHHHhhhh---cCCcEEEEEecceecCCCChH---H----HHHHhcCcccccccccCCcccccc
Q 017914 183 ANPTTELGRLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRSSV---D----TIIKQLPLSEGQKMRRARQYTSRI 252 (364)
Q Consensus 183 ~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~---~----~~~~~~~~~~~~~~~~~~~~~~~i 252 (364)
......|+.+|.+.+.+.+.++.+ .|+++++|+||.+..+..... . .+....+ ...+.
T Consensus 177 ~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p------------~~r~~ 244 (293)
T 3grk_A 177 MPNYNVMGVAKAALEASVKYLAVDLGPQNIRVNAISAGPIKTLAASGIGDFRYILKWNEYNAP------------LRRTV 244 (293)
T ss_dssp CTTTTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC------CCHHHHHHHHHHHST------------TSSCC
T ss_pred CCchHHHHHHHHHHHHHHHHHHHHHhHhCCEEEEEecCCCcchhhhcccchHHHHHHHHhcCC------------CCCCC
Confidence 123468999999999999988754 489999999999987642211 1 1111111 12346
Q ss_pred cHHHHHHHHHHHccCC---CCCceEEEeCCCC
Q 017914 253 HVDDICQVLSASIDKP---SAWNVYNVVDDDP 281 (364)
Q Consensus 253 ~v~Dva~~~~~~l~~~---~~g~~~~i~~~~~ 281 (364)
..+|+|++++.++... -.|+++++.+|..
T Consensus 245 ~pedvA~~v~~L~s~~~~~itG~~i~vdGG~~ 276 (293)
T 3grk_A 245 TIDEVGDVGLYFLSDLSRSVTGEVHHADSGYH 276 (293)
T ss_dssp CHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred CHHHHHHHHHHHcCccccCCcceEEEECCCcc
Confidence 7999999999998754 3489999988853
|
| >2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ... | Back alignment and structure |
|---|
Probab=99.72 E-value=1.3e-16 Score=141.04 Aligned_cols=204 Identities=12% Similarity=0.001 Sum_probs=132.6
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCc-hhhhhh----h---hCCceEEEccCCh----hhH--Hhh---
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNV-MKKKEL----E---QSGFDVHLFNANE----TAL--MIL--- 118 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~-~~~~~l----~---~~~~~~~~~D~~~----~~~--~~~--- 118 (364)
..++++|||| +|+||++++++|+++|++|++++|+. +....+ . ...+.++.+|++| .+. ..+
T Consensus 21 l~~k~~lVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~ 100 (288)
T 2x9g_A 21 MEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVCQADLTNSNVLPASCEEIINSC 100 (288)
T ss_dssp -CCCEEEETTCSSHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSCSTTHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhhcCCceEEEEeecCCccCCHHHHHHHHHHH
Confidence 4568999999 99999999999999999999999987 543322 1 1357889999999 653 222
Q ss_pred ----ccCceeeEEEEecCCCCC-----CC-----Chhh----hHHHH------HHHHh----hcCC------ccEEEEEc
Q 017914 119 ----TTLKNYTHLLVSIPPLEG-----TG-----DPML----KHGEL------LRSTL----MNGH------LQWLGYLS 164 (364)
Q Consensus 119 ----~~~d~v~~~~~~~~~~~~-----~~-----~~~~----~~~~~------l~~a~----~~~~------~~r~v~~S 164 (364)
..+|+++|+++....... .. .... ....| +..++ +..+ ..++|++|
T Consensus 101 ~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iv~is 180 (288)
T 2x9g_A 101 FRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQVAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNLC 180 (288)
T ss_dssp HHHHSCCCEEEECCCCCCCCCSCCC--------CCHHHHHHHHHHHHTHHHHHHHHHHHHHC--------CCCEEEEEEC
T ss_pred HHhcCCCCEEEECCCCCCCCccccccchhcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCCCCCCeEEEEEe
Confidence 368999999986543211 11 1111 11122 22222 2223 46899999
Q ss_pred cceeecCCCCccccCCCCCCCCChhHHHHHHHHHHHHHhhhh---cCCcEEEEEecceecCCCChHHHHHHhcCcccccc
Q 017914 165 STGVYGHSGGAWVDEDYPANPTTELGRLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRSSVDTIIKQLPLSEGQK 241 (364)
Q Consensus 165 s~~vy~~~~~~~~~E~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~ 241 (364)
|...+.. ..+...|+.+|...+.+.+.++.+ .|+++++|+||.+.++. ......... +.....
T Consensus 181 S~~~~~~-----------~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~-~~~~~~~~~--~~~~~p 246 (288)
T 2x9g_A 181 DAMVDQP-----------CMAFSLYNMGKHALVGLTQSAALELAPYGIRVNGVAPGVSLLPV-AMGEEEKDK--WRRKVP 246 (288)
T ss_dssp CTTTTSC-----------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSCSCCT-TSCHHHHHH--HHHTCT
T ss_pred cccccCC-----------CCCCchHHHHHHHHHHHHHHHHHHhhccCeEEEEEEeccccCcc-ccChHHHHH--HHhhCC
Confidence 9765422 123468999999999999888754 48999999999998875 211111110 000000
Q ss_pred cccCCccccc-ccHHHHHHHHHHHccCC---CCCceEEEeCCC
Q 017914 242 MRRARQYTSR-IHVDDICQVLSASIDKP---SAWNVYNVVDDD 280 (364)
Q Consensus 242 ~~~~~~~~~~-i~v~Dva~~~~~~l~~~---~~g~~~~i~~~~ 280 (364)
...+ ...+|+|++++.++... -.|+.+++.+|.
T Consensus 247 ------~~r~~~~pedvA~~v~~l~s~~~~~itG~~i~vdGG~ 283 (288)
T 2x9g_A 247 ------LGRREASAEQIADAVIFLVSGSAQYITGSIIKVDGGL 283 (288)
T ss_dssp ------TTSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred ------CCCCCCCHHHHHHHHHHHhCccccCccCCEEEECcch
Confidence 1123 67899999999999753 348899888774
|
| >3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.72 E-value=4.6e-16 Score=136.11 Aligned_cols=202 Identities=11% Similarity=-0.005 Sum_probs=133.4
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCc-hhhhhh----h--hCCceEEEccCChhhH--Hhh-------c
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNV-MKKKEL----E--QSGFDVHLFNANETAL--MIL-------T 119 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~-~~~~~l----~--~~~~~~~~~D~~~~~~--~~~-------~ 119 (364)
..+++||||| +|+||++++++|+++|++|++++|+. +....+ . ...+.++.+|++|.+. ..+ .
T Consensus 29 l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 108 (271)
T 3v2g_A 29 LAGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAGGRAVAIRADNRDAEAIEQAIRETVEALG 108 (271)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 4568999999 99999999999999999999997754 322222 1 1457789999999763 222 3
Q ss_pred cCceeeEEEEecCCCCCCC----ChhhhHHHHH------HHHhhc--CCccEEEEEccceeecCCCCccccCCCCCCCCC
Q 017914 120 TLKNYTHLLVSIPPLEGTG----DPMLKHGELL------RSTLMN--GHLQWLGYLSSTGVYGHSGGAWVDEDYPANPTT 187 (364)
Q Consensus 120 ~~d~v~~~~~~~~~~~~~~----~~~~~~~~~l------~~a~~~--~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~ 187 (364)
.+|+++|+++......... +.......|+ ..++.. ....++|++||..... .+..+..
T Consensus 109 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~g~iv~isS~~~~~----------~~~~~~~ 178 (271)
T 3v2g_A 109 GLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDGGRIITIGSNLAEL----------VPWPGIS 178 (271)
T ss_dssp CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCGGGTC----------CCSTTCH
T ss_pred CCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEeChhhcc----------CCCCCch
Confidence 7899999997654322111 1111122232 222221 1245899998853211 1122446
Q ss_pred hhHHHHHHHHHHHHHhhhh---cCCcEEEEEecceecCCCC----hHHHHHHhcCcccccccccCCcccccccHHHHHHH
Q 017914 188 ELGRLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRS----SVDTIIKQLPLSEGQKMRRARQYTSRIHVDDICQV 260 (364)
Q Consensus 188 ~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~ 260 (364)
.|+.+|...+.+.+.++.+ .|+++++|+||.+.++... ....+....+ ...+..++|+|++
T Consensus 179 ~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~------------~~r~~~pedvA~~ 246 (271)
T 3v2g_A 179 LYSASKAALAGLTKGLARDLGPRGITVNIVHPGSTDTDMNPADGDHAEAQRERIA------------TGSYGEPQDIAGL 246 (271)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSSSSCSSCSSHHHHHHTCT------------TSSCBCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCCCcCCcccccchhHHHHHhcCC------------CCCCCCHHHHHHH
Confidence 8999999999999888755 3899999999999876532 1222222111 1224679999999
Q ss_pred HHHHccCC---CCCceEEEeCCC
Q 017914 261 LSASIDKP---SAWNVYNVVDDD 280 (364)
Q Consensus 261 ~~~~l~~~---~~g~~~~i~~~~ 280 (364)
++.++... -.|+++++.+|.
T Consensus 247 v~fL~s~~~~~itG~~i~vdGG~ 269 (271)
T 3v2g_A 247 VAWLAGPQGKFVTGASLTIDGGA 269 (271)
T ss_dssp HHHHHSGGGTTCCSCEEEESTTT
T ss_pred HHHHhCcccCCccCCEEEeCcCc
Confidence 99988654 348999998774
|
| >3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.72 E-value=7.3e-17 Score=139.97 Aligned_cols=203 Identities=11% Similarity=0.048 Sum_probs=133.8
Q ss_pred CCCeEEEEc-CChhhHHHHHHHHhCC--CEEEEEEeCchhhhhhhh---CCceEEEccCChhhH--Hhh-------ccCc
Q 017914 58 SPNRMLILG-MGFVGRIFAEKIKNQG--WVVSGTCTNVMKKKELEQ---SGFDVHLFNANETAL--MIL-------TTLK 122 (364)
Q Consensus 58 ~~~~vlVtG-tG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~l~~---~~~~~~~~D~~~~~~--~~~-------~~~d 122 (364)
|++++|||| +|+||++++++|+++| +.|++.+|+.+....+.+ .++.++.+|++|.+. ..+ ..+|
T Consensus 1 Mgk~~lVTGas~GIG~aia~~l~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id 80 (254)
T 3kzv_A 1 MGKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKYGDRFFYVVGDITEDSVLKQLVNAAVKGHGKID 80 (254)
T ss_dssp -CCEEEECSTTSHHHHHHHHHHHHHCSSCEEEEEESCHHHHHHHHHHHGGGEEEEESCTTSHHHHHHHHHHHHHHHSCCC
T ss_pred CCCEEEEECCCchHHHHHHHHHHhcCCCeEEEEecCCHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHhcCCcc
Confidence 357999999 9999999999999984 799999998776555432 467889999999764 222 3689
Q ss_pred eeeEEEEecCCCCCCCC-----hhhhHHHH------HHHHh----hcCCccEEEEEccceeecCCCCccccCCCCCCCCC
Q 017914 123 NYTHLLVSIPPLEGTGD-----PMLKHGEL------LRSTL----MNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANPTT 187 (364)
Q Consensus 123 ~v~~~~~~~~~~~~~~~-----~~~~~~~~------l~~a~----~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~ 187 (364)
+++|+++.........+ .......| +..++ ++.+ .++|++||...+.. ..+..
T Consensus 81 ~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~-g~iv~isS~~~~~~-----------~~~~~ 148 (254)
T 3kzv_A 81 SLVANAGVLEPVQNVNEIDVNAWKKLYDINFFSIVSLVGIALPELKKTN-GNVVFVSSDACNMY-----------FSSWG 148 (254)
T ss_dssp EEEEECCCCCCCTTTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCSCCCCS-----------SCCSH
T ss_pred EEEECCcccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CeEEEEcCchhccC-----------CCCcc
Confidence 99999986543222111 11111222 22222 3334 69999999765432 22346
Q ss_pred hhHHHHHHHHHHHHHhhhhc-CCcEEEEEecceecCCCChH----------HHHHHhcCcccccccccCCcccccccHHH
Q 017914 188 ELGRLRLSAEKGWLNLGRDL-GISAQVFRLGGIYGPGRSSV----------DTIIKQLPLSEGQKMRRARQYTSRIHVDD 256 (364)
Q Consensus 188 ~Y~~sK~~~E~~~~~~~~~~-~~~~~ilRp~~v~g~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~i~v~D 256 (364)
.|+.+|...+.+.+.++.+. +++++.++||.+..+....+ ...... .........+.+++|
T Consensus 149 ~Y~asK~a~~~~~~~la~e~~~i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~r~~~p~d 220 (254)
T 3kzv_A 149 AYGSSKAALNHFAMTLANEERQVKAIAVAPGIVDTDMQVNIRENVGPSSMSAEQLKM--------FRGLKENNQLLDSSV 220 (254)
T ss_dssp HHHHHHHHHHHHHHHHHHHCTTSEEEEEECSSCCCCCSCCCCCCCCTTTSCHHHHHH--------HHHHHTTC----CHH
T ss_pred hHHHHHHHHHHHHHHHHhhccCcEEEEEeCCcccchhHHHhhcccCccccCHHHHHH--------HHHHHhcCCcCCccc
Confidence 89999999999999988664 89999999999987642210 000000 000011233578999
Q ss_pred HHHHHHHHccCCC----CCceEEEeCCC
Q 017914 257 ICQVLSASIDKPS----AWNVYNVVDDD 280 (364)
Q Consensus 257 va~~~~~~l~~~~----~g~~~~i~~~~ 280 (364)
+|++++.++.... .|+.+++.+++
T Consensus 221 va~~v~~L~s~~~~~~itG~~i~vdg~~ 248 (254)
T 3kzv_A 221 PATVYAKLALHGIPDGVNGQYLSYNDPA 248 (254)
T ss_dssp HHHHHHHHHHHCCCGGGTTCEEETTCGG
T ss_pred HHHHHHHHHhhcccCCCCccEEEecCcc
Confidence 9999999887652 48899887765
|
| >2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.72 E-value=1.9e-16 Score=138.61 Aligned_cols=202 Identities=14% Similarity=0.055 Sum_probs=128.7
Q ss_pred CeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhh-----CCceEEEccCChhhH--Hhh-------ccCcee
Q 017914 60 NRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQ-----SGFDVHLFNANETAL--MIL-------TTLKNY 124 (364)
Q Consensus 60 ~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~-----~~~~~~~~D~~~~~~--~~~-------~~~d~v 124 (364)
++||||| +|+||++++++|+++|++|++++|+.++...+.. .++.++.+|++|.+. ..+ ..+|++
T Consensus 22 k~vlVTGas~gIG~aia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~l 101 (272)
T 2nwq_A 22 STLFITGATSGFGEACARRFAEAGWSLVLTGRREERLQALAGELSAKTRVLPLTLDVRDRAAMSAAVDNLPEEFATLRGL 101 (272)
T ss_dssp CEEEESSTTTSSHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHTCCGGGSSCCEE
T ss_pred cEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCCCCEE
Confidence 7899999 9999999999999999999999998766554322 267889999999763 333 346999
Q ss_pred eEEEEecCCCCCCCC-----hhhhHHHH----------HHHHhhcCCcc-EEEEEccceeecCCCCccccCCCCCCCCCh
Q 017914 125 THLLVSIPPLEGTGD-----PMLKHGEL----------LRSTLMNGHLQ-WLGYLSSTGVYGHSGGAWVDEDYPANPTTE 188 (364)
Q Consensus 125 ~~~~~~~~~~~~~~~-----~~~~~~~~----------l~~a~~~~~~~-r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~ 188 (364)
+|+++.........+ .......| ++..+++.+.. ++|++||...+.. ......
T Consensus 102 vnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~~IV~isS~~~~~~-----------~~~~~~ 170 (272)
T 2nwq_A 102 INNAGLALGTDPAQSCDLDDWDTMVDTNIKGLLYSTRLLLPRLIAHGAGASIVNLGSVAGKWP-----------YPGSHV 170 (272)
T ss_dssp EECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGTSC-----------CTTCHH
T ss_pred EECCCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeCCchhccC-----------CCCCch
Confidence 999875432111111 11111222 22333344556 9999999765422 123468
Q ss_pred hHHHHHHHHHHHHHhhhh---cCCcEEEEEecceecCCCChHHHHHHhcCcccccccccCCcccccccHHHHHHHHHHHc
Q 017914 189 LGRLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRSSVDTIIKQLPLSEGQKMRRARQYTSRIHVDDICQVLSASI 265 (364)
Q Consensus 189 Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l 265 (364)
|+.+|...+.+.+.++.+ .|+++++|+||.+.++..... +...... ...... ...++..+|+|++++.++
T Consensus 171 Y~asKaa~~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~--~~~~~~~-~~~~~~----~~~~~~pedvA~~v~~l~ 243 (272)
T 2nwq_A 171 YGGTKAFVEQFSLNLRCDLQGTGVRVTNLEPGLCESEFSLVR--FGGDQAR-YDKTYA----GAHPIQPEDIAETIFWIM 243 (272)
T ss_dssp HHHHHHHHHHHHHHHHTTCTTSCCEEEEEEECSBC---------------------------CCCCBCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhCccCeEEEEEEcCCCcCcchhcc--cccchHH-HHHhhc----cCCCCCHHHHHHHHHHHh
Confidence 999999999999888754 479999999999877532110 0000000 000000 012378999999999999
Q ss_pred cCCCC--CceEEEeCC
Q 017914 266 DKPSA--WNVYNVVDD 279 (364)
Q Consensus 266 ~~~~~--g~~~~i~~~ 279 (364)
..+.. |+.+.+.++
T Consensus 244 s~~~~~~g~~i~v~~~ 259 (272)
T 2nwq_A 244 NQPAHLNINSLEIMPV 259 (272)
T ss_dssp TSCTTEEEEEEEEEET
T ss_pred CCCccCccceEEEeec
Confidence 86543 566666554
|
| >1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.72 E-value=1.5e-16 Score=138.60 Aligned_cols=212 Identities=9% Similarity=-0.057 Sum_probs=132.0
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhh------hCCceEEEccCChhhH--Hhh-------cc
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELE------QSGFDVHLFNANETAL--MIL-------TT 120 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~------~~~~~~~~~D~~~~~~--~~~-------~~ 120 (364)
..+++||||| +|+||++++++|+++|++|++++|+.+....+. ..++.++.+|++|.+. ..+ ..
T Consensus 5 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 84 (262)
T 1zem_A 5 FNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDFGK 84 (262)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence 4568999999 999999999999999999999999876554332 1357789999999763 222 36
Q ss_pred CceeeEEEEecCCCCCCC-----ChhhhHHHH------HHHH----hhcCCccEEEEEccceeecCCCCccccCCCCCCC
Q 017914 121 LKNYTHLLVSIPPLEGTG-----DPMLKHGEL------LRST----LMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANP 185 (364)
Q Consensus 121 ~d~v~~~~~~~~~~~~~~-----~~~~~~~~~------l~~a----~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~ 185 (364)
+|+++|+++......... +.......| +..+ +.+.+..++|++||...+.... .
T Consensus 85 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~-----------~ 153 (262)
T 1zem_A 85 IDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVKGPP-----------N 153 (262)
T ss_dssp CCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHSCCT-----------T
T ss_pred CCEEEECCCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCCC-----------C
Confidence 899999997541111111 111111122 2222 2234567999999976543221 2
Q ss_pred CChhHHHHHHHHHHHHHhhhh---cCCcEEEEEecceecCCCChH-HHHHHh---cCcc-cc----cccccCCccccccc
Q 017914 186 TTELGRLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRSSV-DTIIKQ---LPLS-EG----QKMRRARQYTSRIH 253 (364)
Q Consensus 186 ~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~-~~~~~~---~~~~-~~----~~~~~~~~~~~~i~ 253 (364)
...|+.+|...+.+.+.++.+ .|+++++|+||.+..+..... ..+... .... .. ...........+..
T Consensus 154 ~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~ 233 (262)
T 1zem_A 154 MAAYGTSKGAIIALTETAALDLAPYNIRVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGSVPMRRYGD 233 (262)
T ss_dssp BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSHHHHHHHHHHHHHTCTTSCSSHHHHHHHHHHTSTTSSCBC
T ss_pred CchHHHHHHHHHHHHHHHHHHHHhhCeEEEEEecCCcCcchhhhhccchhhhccccccccCHHHHHHHHHhcCCCCCCcC
Confidence 357999999999988887643 489999999998865421100 000000 0000 00 00000001123477
Q ss_pred HHHHHHHHHHHccCC---CCCceEEEeCC
Q 017914 254 VDDICQVLSASIDKP---SAWNVYNVVDD 279 (364)
Q Consensus 254 v~Dva~~~~~~l~~~---~~g~~~~i~~~ 279 (364)
.+|+|++++.++... -.|+.+.+.+|
T Consensus 234 p~dvA~~v~~l~s~~~~~itG~~i~vdGG 262 (262)
T 1zem_A 234 INEIPGVVAFLLGDDSSFMTGVNLPIAGG 262 (262)
T ss_dssp GGGSHHHHHHHHSGGGTTCCSCEEEESCC
T ss_pred HHHHHHHHHHHcCchhcCcCCcEEecCCC
Confidence 899999999988754 24888887654
|
| >3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A* | Back alignment and structure |
|---|
Probab=99.72 E-value=8.7e-16 Score=131.24 Aligned_cols=198 Identities=9% Similarity=-0.035 Sum_probs=133.4
Q ss_pred CCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhh--CCceEEEccCChhhH---------HhhccCceee
Q 017914 58 SPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQ--SGFDVHLFNANETAL---------MILTTLKNYT 125 (364)
Q Consensus 58 ~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~--~~~~~~~~D~~~~~~---------~~~~~~d~v~ 125 (364)
|.|+||||| ++.||+++++.|+++|++|++.+|+.+....+.+ .++..+.+|++|++. +.+..+|+++
T Consensus 1 MnK~vlVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~g~iDiLV 80 (247)
T 3ged_A 1 MNRGVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFAKERPNLFYFHGDVADPLTLKKFVEYAMEKLQRIDVLV 80 (247)
T ss_dssp -CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEE
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcCCEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 458999998 8999999999999999999999999877665543 457789999999763 2234678888
Q ss_pred EEEEecCCCCCCCChhh----hHHHHHHH----------HhhcCCccEEEEEccceeecCCCCccccCCCCCCCCChhHH
Q 017914 126 HLLVSIPPLEGTGDPML----KHGELLRS----------TLMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANPTTELGR 191 (364)
Q Consensus 126 ~~~~~~~~~~~~~~~~~----~~~~~l~~----------a~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~~ 191 (364)
+.|+......-..-... ....|+.. .+.+.+ .++|++||...+.... ....|+.
T Consensus 81 NNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~-G~IInisS~~~~~~~~-----------~~~~Y~a 148 (247)
T 3ged_A 81 NNACRGSKGILSSLLYEEFDYILSVGLKAPYELSRLCRDELIKNK-GRIINIASTRAFQSEP-----------DSEAYAS 148 (247)
T ss_dssp ECCCCCCCCGGGTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEECCGGGTSCCT-----------TCHHHHH
T ss_pred ECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-CcEEEEeecccccCCC-----------CCHHHHH
Confidence 88865432211111111 11223222 222333 5899999875432211 2357999
Q ss_pred HHHHHHHHHHHhhhhc--CCcEEEEEecceecCCC-ChHHHHHHhcCcccccccccCCcccccccHHHHHHHHHHHccCC
Q 017914 192 LRLSAEKGWLNLGRDL--GISAQVFRLGGIYGPGR-SSVDTIIKQLPLSEGQKMRRARQYTSRIHVDDICQVLSASIDKP 268 (364)
Q Consensus 192 sK~~~E~~~~~~~~~~--~~~~~ilRp~~v~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~ 268 (364)
+|.....+.+.++.+. ++++..|.||.+-.+.. ..........+++. +...+|+|++++.+++..
T Consensus 149 sKaal~~ltk~lA~ela~~IrVN~I~PG~i~t~~~~~~~~~~~~~~Pl~R------------~g~pediA~~v~fL~s~~ 216 (247)
T 3ged_A 149 AKGGIVALTHALAMSLGPDVLVNCIAPGWINVTEQQEFTQEDCAAIPAGK------------VGTPKDISNMVLFLCQQD 216 (247)
T ss_dssp HHHHHHHHHHHHHHHHTTTSEEEEEEECSBCCCC---CCHHHHHTSTTSS------------CBCHHHHHHHHHHHHHCS
T ss_pred HHHHHHHHHHHHHHHHCCCCEEEEEecCcCCCCCcHHHHHHHHhcCCCCC------------CcCHHHHHHHHHHHHhCC
Confidence 9999999988887543 79999999999865542 22333333322211 245899999999998754
Q ss_pred -CCCceEEEeCC
Q 017914 269 -SAWNVYNVVDD 279 (364)
Q Consensus 269 -~~g~~~~i~~~ 279 (364)
-.|+++.+.+|
T Consensus 217 ~iTG~~i~VDGG 228 (247)
T 3ged_A 217 FITGETIIVDGG 228 (247)
T ss_dssp SCCSCEEEESTT
T ss_pred CCCCCeEEECcC
Confidence 24899998877
|
| >3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.72 E-value=1.5e-16 Score=140.31 Aligned_cols=207 Identities=9% Similarity=-0.001 Sum_probs=137.0
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCC---EEEEEEeCchhhhhhh--------hCCceEEEccCChhhH--Hhh----
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGW---VVSGTCTNVMKKKELE--------QSGFDVHLFNANETAL--MIL---- 118 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~---~V~~~~r~~~~~~~l~--------~~~~~~~~~D~~~~~~--~~~---- 118 (364)
..+++||||| +|+||++++++|+++|+ +|++.+|+.+..+.+. ...+.++.+|++|.+. ..+
T Consensus 31 l~~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~ 110 (287)
T 3rku_A 31 LAKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDITQAEKIKPFIENLP 110 (287)
T ss_dssp HTTCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCTTCEEEEEECCTTCGGGHHHHHHTSC
T ss_pred cCCCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHH
Confidence 4568999999 99999999999999987 9999999887655432 2357789999999763 222
Q ss_pred ---ccCceeeEEEEecCCCCCCCC-----hhhhHHHH------HHHHh----hcCCccEEEEEccceeecCCCCccccCC
Q 017914 119 ---TTLKNYTHLLVSIPPLEGTGD-----PMLKHGEL------LRSTL----MNGHLQWLGYLSSTGVYGHSGGAWVDED 180 (364)
Q Consensus 119 ---~~~d~v~~~~~~~~~~~~~~~-----~~~~~~~~------l~~a~----~~~~~~r~v~~Ss~~vy~~~~~~~~~E~ 180 (364)
..+|+++|+++.........+ .......| +..++ ++.+..++|++||...+..
T Consensus 111 ~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~--------- 181 (287)
T 3rku_A 111 QEFKDIDILVNNAGKALGSDRVGQIATEDIQDVFDTNVTALINITQAVLPIFQAKNSGDIVNLGSIAGRDA--------- 181 (287)
T ss_dssp GGGCSCCEEEECCCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSC---------
T ss_pred HhcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEECChhhcCC---------
Confidence 358999999886542221111 11112222 22222 3445679999999764421
Q ss_pred CCCCCCChhHHHHHHHHHHHHHhhhh---cCCcEEEEEecceecCCCChHHHHHHhcCcccccccccCCcccccccHHHH
Q 017914 181 YPANPTTELGRLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRSSVDTIIKQLPLSEGQKMRRARQYTSRIHVDDI 257 (364)
Q Consensus 181 ~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dv 257 (364)
......|+.+|.+.+.+.+.++.+ .|+++++|+||.+..+.. ............... .....+.++|+
T Consensus 182 --~~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~---~~~~~~~~~~~~~~~----~~~~p~~pedv 252 (287)
T 3rku_A 182 --YPTGSIYCASKFAVGAFTDSLRKELINTKIRVILIAPGLVETEFS---LVRYRGNEEQAKNVY----KDTTPLMADDV 252 (287)
T ss_dssp --CTTCHHHHHHHHHHHHHHHHHHHHTTTSSCEEEEEEESCEESSHH---HHHTTTCHHHHHHHH----TTSCCEEHHHH
T ss_pred --CCCCchHHHHHHHHHHHHHHHHHHhhhcCCEEEEEeCCcCcCccc---cccccCcHHHHHHhh----cccCCCCHHHH
Confidence 123468999999999999988765 589999999999976521 000000000000000 00112479999
Q ss_pred HHHHHHHccCCCC---CceEEEeCCCC
Q 017914 258 CQVLSASIDKPSA---WNVYNVVDDDP 281 (364)
Q Consensus 258 a~~~~~~l~~~~~---g~~~~i~~~~~ 281 (364)
|++++.++..+.. |+++.+.+++.
T Consensus 253 A~~v~~l~s~~~~~i~g~~i~v~~g~~ 279 (287)
T 3rku_A 253 ADLIVYATSRKQNTVIADTLIFPTNQA 279 (287)
T ss_dssp HHHHHHHHTSCTTEEEEEEEEEETTEE
T ss_pred HHHHHHHhCCCCCeEecceEEeeCCCC
Confidence 9999999987754 78888887754
|
| >3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.71 E-value=3.3e-16 Score=136.68 Aligned_cols=206 Identities=10% Similarity=-0.008 Sum_probs=129.0
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeC-chhhhhhh------hCCceEEEccCChhhH--Hhh-------c
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTN-VMKKKELE------QSGFDVHLFNANETAL--MIL-------T 119 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~-~~~~~~l~------~~~~~~~~~D~~~~~~--~~~-------~ 119 (364)
..++++|||| +|+||++++++|+++|++|++..++ .+..+.+. ...+.++.+|++|.+. ..+ .
T Consensus 25 ~~~k~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g 104 (267)
T 3u5t_A 25 ETNKVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAGGKALTAQADVSDPAAVRRLFATAEEAFG 104 (267)
T ss_dssp --CCEEEEESCSSHHHHHHHHHHHHHTCEEEEEESSCSHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 3467899999 9999999999999999999998554 33333221 1357889999999764 222 3
Q ss_pred cCceeeEEEEecCCCCCCCChh----hhHHHHHHHH------hhc--CCccEEEEEccceeecCCCCccccCCCCCCCCC
Q 017914 120 TLKNYTHLLVSIPPLEGTGDPM----LKHGELLRST------LMN--GHLQWLGYLSSTGVYGHSGGAWVDEDYPANPTT 187 (364)
Q Consensus 120 ~~d~v~~~~~~~~~~~~~~~~~----~~~~~~l~~a------~~~--~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~ 187 (364)
.+|+++|+++............ .....|+... +.. ....++|++||...+.... ...
T Consensus 105 ~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~-----------~~~ 173 (267)
T 3u5t_A 105 GVDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRVGGRIINMSTSQVGLLHP-----------SYG 173 (267)
T ss_dssp CEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCTHHHHCCT-----------TCH
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeEEEEeChhhccCCC-----------Cch
Confidence 6899999987654322111111 1122333322 211 1135899999876543221 336
Q ss_pred hhHHHHHHHHHHHHHhhhhc---CCcEEEEEecceecCCCChHHHHHHhcCcccccccccCCcccccccHHHHHHHHHHH
Q 017914 188 ELGRLRLSAEKGWLNLGRDL---GISAQVFRLGGIYGPGRSSVDTIIKQLPLSEGQKMRRARQYTSRIHVDDICQVLSAS 264 (364)
Q Consensus 188 ~Y~~sK~~~E~~~~~~~~~~---~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~ 264 (364)
.|+.+|.+.+.+.+.++.+. |++++.+.||.+..+.... ..... . ............+..++|+|++++.+
T Consensus 174 ~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~---~~~~~-~--~~~~~~~~p~~r~~~pedvA~~v~~L 247 (267)
T 3u5t_A 174 IYAAAKAGVEAMTHVLSKELRGRDITVNAVAPGPTATDLFLE---GKSDE-V--RDRFAKLAPLERLGTPQDIAGAVAFL 247 (267)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTTSCCEEEEEEECCBC---------------C--HHHHHTSSTTCSCBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhCCEEEEEEECCCcCccccc---cCCHH-H--HHHHHhcCCCCCCcCHHHHHHHHHHH
Confidence 89999999999999987654 7999999999987653110 00000 0 00000111123457899999999999
Q ss_pred ccCCC---CCceEEEeCC
Q 017914 265 IDKPS---AWNVYNVVDD 279 (364)
Q Consensus 265 l~~~~---~g~~~~i~~~ 279 (364)
+.... .|+++++.+|
T Consensus 248 ~s~~~~~itG~~i~vdGG 265 (267)
T 3u5t_A 248 AGPDGAWVNGQVLRANGG 265 (267)
T ss_dssp HSTTTTTCCSEEEEESSS
T ss_pred hCccccCccCCEEEeCCC
Confidence 97653 4889998776
|
| >3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A* | Back alignment and structure |
|---|
Probab=99.71 E-value=3.9e-16 Score=134.79 Aligned_cols=202 Identities=13% Similarity=0.063 Sum_probs=128.9
Q ss_pred CeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhh---CCceEEEccCChhhH--Hhh-------ccCceeeE
Q 017914 60 NRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQ---SGFDVHLFNANETAL--MIL-------TTLKNYTH 126 (364)
Q Consensus 60 ~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~---~~~~~~~~D~~~~~~--~~~-------~~~d~v~~ 126 (364)
|++|||| +|+||+++++.|+++|++|++++|+.++...+.. .++.++.+|++|.+. ..+ ..+|+++|
T Consensus 1 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lvn 80 (248)
T 3asu_A 1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWCNIDILVN 80 (248)
T ss_dssp CEEEETTTTSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHTSCTTTCCCCEEEE
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCceEEEEcCCCCHHHHHHHHHHHHHhCCCCCEEEE
Confidence 5799999 9999999999999999999999998776554432 367889999999764 222 26899999
Q ss_pred EEEecCCCCCCC-----ChhhhHHHH------HHHH----hhcCCccEEEEEccceeecCCCCccccCCCCCCCCChhHH
Q 017914 127 LLVSIPPLEGTG-----DPMLKHGEL------LRST----LMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANPTTELGR 191 (364)
Q Consensus 127 ~~~~~~~~~~~~-----~~~~~~~~~------l~~a----~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~~ 191 (364)
+++......... +.......| +..+ +++.+..++|++||...+.. ..+...|+.
T Consensus 81 nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~-----------~~~~~~Y~a 149 (248)
T 3asu_A 81 NAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSWP-----------YAGGNVYGA 149 (248)
T ss_dssp CCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSC-----------CTTCHHHHH
T ss_pred CCCcCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEccchhccC-----------CCCCchHHH
Confidence 987542111111 111112222 2222 22445679999999765422 123468999
Q ss_pred HHHHHHHHHHHhhhh---cCCcEEEEEecceec-CCCChHHHHHHhcCcccccccccCCcccccccHHHHHHHHHHHccC
Q 017914 192 LRLSAEKGWLNLGRD---LGISAQVFRLGGIYG-PGRSSVDTIIKQLPLSEGQKMRRARQYTSRIHVDDICQVLSASIDK 267 (364)
Q Consensus 192 sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~ 267 (364)
+|...+.+.+.++.+ .|+++++++||.+.| +..... +...... ..... ....+++.+|+|++++.++..
T Consensus 150 sKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~gT~~~~~~--~~~~~~~-~~~~~----~~~~~~~p~dvA~~v~~l~s~ 222 (248)
T 3asu_A 150 TKAFVRQFSLNLRTDLHGTAVRVTDIEPGLVGGTEFSNVR--FKGDDGK-AEKTY----QNTVALTPEDVSEAVWWVSTL 222 (248)
T ss_dssp HHHHHHHHHHHHHHHTTTSCCEEEEEEECSBCC-----------------------------CCBCHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHhhhcCcEEEEEeccccccCcchhhc--ccCchHH-HHHHH----hccCCCCHHHHHHHHHHHhcC
Confidence 999999999888754 489999999999984 421100 0000000 00000 011236899999999999986
Q ss_pred CC--CCceEEEeCC
Q 017914 268 PS--AWNVYNVVDD 279 (364)
Q Consensus 268 ~~--~g~~~~i~~~ 279 (364)
+. .|+.+.+...
T Consensus 223 ~~~~~g~~i~v~~~ 236 (248)
T 3asu_A 223 PAHVNINTLEMMPV 236 (248)
T ss_dssp CTTCCCCEEEECCT
T ss_pred CccceeeEEEEccc
Confidence 53 3677776543
|
| >4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.71 E-value=3.5e-16 Score=137.61 Aligned_cols=199 Identities=11% Similarity=-0.013 Sum_probs=127.6
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhh------C-CceEEEccCChhhH--Hhh-------c
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQ------S-GFDVHLFNANETAL--MIL-------T 119 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~------~-~~~~~~~D~~~~~~--~~~-------~ 119 (364)
..+++||||| +|+||++++++|+++|++|++++|+.+..+.+.. . .+.++.+|++|.+. ..+ .
T Consensus 31 l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 110 (281)
T 4dry_A 31 GEGRIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRTGNIVRAVVCDVGDPDQVAALFAAVRAEFA 110 (281)
T ss_dssp ---CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 4568999999 9999999999999999999999998776544321 2 24889999999763 222 3
Q ss_pred cCceeeEEEEecCCCCCCCC-----hhhhHHHHHH----------HHhhcCC--ccEEEEEccceeecCCCCccccCCCC
Q 017914 120 TLKNYTHLLVSIPPLEGTGD-----PMLKHGELLR----------STLMNGH--LQWLGYLSSTGVYGHSGGAWVDEDYP 182 (364)
Q Consensus 120 ~~d~v~~~~~~~~~~~~~~~-----~~~~~~~~l~----------~a~~~~~--~~r~v~~Ss~~vy~~~~~~~~~E~~~ 182 (364)
.+|+++|+++.........+ .......|+. ..+++.+ ..++|++||...+..
T Consensus 111 ~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~----------- 179 (281)
T 4dry_A 111 RLDLLVNNAGSNVPPVPLEEVTFEQWNGIVAANLTGAFLCTQHAFRMMKAQTPRGGRIINNGSISAQTP----------- 179 (281)
T ss_dssp CCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCGGGTCC-----------
T ss_pred CCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCcEEEEECCHHhCCC-----------
Confidence 67999999986433221111 1111222222 2222332 468999999754321
Q ss_pred CCCCChhHHHHHHHHHHHHHhhhh---cCCcEEEEEecceecCCCChHHHHHHhcCcccccccccCCcccccccHHHHHH
Q 017914 183 ANPTTELGRLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRSSVDTIIKQLPLSEGQKMRRARQYTSRIHVDDICQ 259 (364)
Q Consensus 183 ~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~ 259 (364)
..+...|+.+|.+.+.+.+.++.+ .|+++++|+||.+..+.... +..... ... .......++.++|+|+
T Consensus 180 ~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~---~~~~~~-~~~----~~~~~~~~~~pedvA~ 251 (281)
T 4dry_A 180 RPNSAPYTATKHAITGLTKSTALDGRMHDIACGQIDIGNAATDMTAR---MSTGVL-QAN----GEVAAEPTIPIEHIAE 251 (281)
T ss_dssp CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEECBCC----------CEEE-CTT----SCEEECCCBCHHHHHH
T ss_pred CCCChhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECcCcChhhhh---hcchhh-hhh----hcccccCCCCHHHHHH
Confidence 224468999999999999988754 58999999999987653211 111100 000 0011223588999999
Q ss_pred HHHHHccCCCCCceE
Q 017914 260 VLSASIDKPSAWNVY 274 (364)
Q Consensus 260 ~~~~~l~~~~~g~~~ 274 (364)
+++.++.++....+.
T Consensus 252 ~v~fL~s~~~~~~i~ 266 (281)
T 4dry_A 252 AVVYMASLPLSANVL 266 (281)
T ss_dssp HHHHHHHSCTTEEEE
T ss_pred HHHHHhCCCccCccc
Confidence 999999988664333
|
| >2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A* | Back alignment and structure |
|---|
Probab=99.71 E-value=9e-16 Score=132.47 Aligned_cols=194 Identities=11% Similarity=0.064 Sum_probs=127.0
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhh------hCCceEEEccCChhhH--Hhh-------cc
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELE------QSGFDVHLFNANETAL--MIL-------TT 120 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~------~~~~~~~~~D~~~~~~--~~~-------~~ 120 (364)
..++++|||| +|+||++++++|+++|++|++++|+.++.+.+. ..++.++.+|++|.+. ..+ ..
T Consensus 5 l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~ 84 (247)
T 2jah_A 5 LQGKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAGAKVHVLELDVADRQGVDAAVASTVEALGG 84 (247)
T ss_dssp TTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 4568999999 999999999999999999999999876654332 1357889999999763 222 37
Q ss_pred CceeeEEEEecCCCCCCCCh----hhhHHHH------HHHHh----hcCCccEEEEEccceeecCCCCccccCCCCCCCC
Q 017914 121 LKNYTHLLVSIPPLEGTGDP----MLKHGEL------LRSTL----MNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANPT 186 (364)
Q Consensus 121 ~d~v~~~~~~~~~~~~~~~~----~~~~~~~------l~~a~----~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~ 186 (364)
+|+++|+++........... ......| +..++ .+.+ .++|++||...+.. ....
T Consensus 85 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~-----------~~~~ 152 (247)
T 2jah_A 85 LDILVNNAGIMLLGPVEDADTTDWTRMIDTNLLGLMYMTRAALPHLLRSK-GTVVQMSSIAGRVN-----------VRNA 152 (247)
T ss_dssp CSEEEECCCCCCCCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGTCC-----------CTTC
T ss_pred CCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCC-CEEEEEccHHhcCC-----------CCCC
Confidence 89999999764322111111 1111222 22222 2334 79999999764422 1234
Q ss_pred ChhHHHHHHHHHHHHHhhhh---cCCcEEEEEecceecCCCChH--HHHHHhcCcccccccccCCcccccccHHHHHHHH
Q 017914 187 TELGRLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRSSV--DTIIKQLPLSEGQKMRRARQYTSRIHVDDICQVL 261 (364)
Q Consensus 187 ~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~ 261 (364)
..|+.+|...+.+.+.++.+ .|+++++|+||.+..+..... ...... ... . . ..+.+++.+|+|+++
T Consensus 153 ~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~--~~~--~---~-~~~~~~~pedvA~~v 224 (247)
T 2jah_A 153 AVYQATKFGVNAFSETLRQEVTERGVRVVVIEPGTTDTELRGHITHTATKEM--YEQ--R---I-SQIRKLQAQDIAEAV 224 (247)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBSSSGGGGCCCHHHHHH--HHH--H---T-TTSCCBCHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHhcccCcEEEEEECCCCCCcchhcccchhhHHH--HHh--c---c-cccCCCCHHHHHHHH
Confidence 68999999999998887644 489999999999877532110 000000 000 0 0 011247899999999
Q ss_pred HHHccCCCC
Q 017914 262 SASIDKPSA 270 (364)
Q Consensus 262 ~~~l~~~~~ 270 (364)
+.++..+..
T Consensus 225 ~~l~s~~~~ 233 (247)
T 2jah_A 225 RYAVTAPHH 233 (247)
T ss_dssp HHHHHSCTT
T ss_pred HHHhCCCcc
Confidence 999986543
|
| >1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A* | Back alignment and structure |
|---|
Probab=99.71 E-value=3.3e-16 Score=138.53 Aligned_cols=205 Identities=10% Similarity=-0.041 Sum_probs=133.9
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEE-eCchhhhhh----h---hCCceEEEccCChhh-------------
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTC-TNVMKKKEL----E---QSGFDVHLFNANETA------------- 114 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~-r~~~~~~~l----~---~~~~~~~~~D~~~~~------------- 114 (364)
..++++|||| +|+||+++++.|+++|++|++++ |+.+....+ . ..++.++.+|++|.+
T Consensus 7 l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 86 (291)
T 1e7w_A 7 PTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPV 86 (291)
T ss_dssp -CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----CCCB
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHhhhcCCeeEEEEeecCCccccccccccccccc
Confidence 4568999999 99999999999999999999999 887654332 1 235788999999865
Q ss_pred ----H--Hhh-------ccCceeeEEEEecCCCCCCCCh--------------hh----hHHHH------HHHH----hh
Q 017914 115 ----L--MIL-------TTLKNYTHLLVSIPPLEGTGDP--------------ML----KHGEL------LRST----LM 153 (364)
Q Consensus 115 ----~--~~~-------~~~d~v~~~~~~~~~~~~~~~~--------------~~----~~~~~------l~~a----~~ 153 (364)
. ..+ ..+|+++|+++........... .. ....| +..+ +.
T Consensus 87 ~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~ 166 (291)
T 1e7w_A 87 TLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVA 166 (291)
T ss_dssp CHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 3 222 3689999999864332111111 11 11122 2222 22
Q ss_pred cCC------ccEEEEEccceeecCCCCccccCCCCCCCCChhHHHHHHHHHHHHHhhhh---cCCcEEEEEecceecCCC
Q 017914 154 NGH------LQWLGYLSSTGVYGHSGGAWVDEDYPANPTTELGRLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGR 224 (364)
Q Consensus 154 ~~~------~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~ 224 (364)
+.+ ..++|++||...+.. ......|+.+|...+.+.+.++.+ .|++++.|+||.+..+.
T Consensus 167 ~~~~~~~~~~g~Iv~isS~~~~~~-----------~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~- 234 (291)
T 1e7w_A 167 GTPAKHRGTNYSIINMVDAMTNQP-----------LLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVD- 234 (291)
T ss_dssp TSCGGGSCSCEEEEEECCTTTTSC-----------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCGG-
T ss_pred hcCCCCCCCCcEEEEEechhhcCC-----------CCCCchhHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCccCCc-
Confidence 444 579999999765422 123468999999999999888654 48999999999986553
Q ss_pred ChHHHHHHhcCcccccccccCCccc-ccccHHHHHHHHHHHccCC---CCCceEEEeCCCC
Q 017914 225 SSVDTIIKQLPLSEGQKMRRARQYT-SRIHVDDICQVLSASIDKP---SAWNVYNVVDDDP 281 (364)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~v~Dva~~~~~~l~~~---~~g~~~~i~~~~~ 281 (364)
..-...... +....+ .. -+...+|+|++++.++... -.|+.+++.+|..
T Consensus 235 ~~~~~~~~~--~~~~~p------~~~r~~~pedvA~~v~~l~s~~~~~itG~~i~vdGG~~ 287 (291)
T 1e7w_A 235 DMPPAVWEG--HRSKVP------LYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYS 287 (291)
T ss_dssp GSCHHHHHH--HHTTCT------TTTSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred cCCHHHHHH--HHhhCC------CCCCCCCHHHHHHHHHHHhCCcccCccCcEEEECCCcc
Confidence 110111111 000000 01 2467999999999998753 3488999887743
|
| >3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444} | Back alignment and structure |
|---|
Probab=99.71 E-value=1.3e-16 Score=142.98 Aligned_cols=202 Identities=11% Similarity=-0.061 Sum_probs=121.8
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhh--------CCceEEEccCChhhH--Hhh-------
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQ--------SGFDVHLFNANETAL--MIL------- 118 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~--------~~~~~~~~D~~~~~~--~~~------- 118 (364)
..+++||||| +|+||++++++|+++|++|++++|+.++...+.. ..+.++.+|++|.+. ..+
T Consensus 6 l~~k~vlVTGas~gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 85 (319)
T 3ioy_A 6 FAGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEVEARF 85 (319)
T ss_dssp CTTCEEEEETTTSTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred CCCCEEEEcCCchHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHHHHHhC
Confidence 4567999999 9999999999999999999999999876544321 167889999999763 222
Q ss_pred ccCceeeEEEEecCCCCCCC----ChhhhHH------HHHHHHhh----c------CCccEEEEEccceeecCCCCcccc
Q 017914 119 TTLKNYTHLLVSIPPLEGTG----DPMLKHG------ELLRSTLM----N------GHLQWLGYLSSTGVYGHSGGAWVD 178 (364)
Q Consensus 119 ~~~d~v~~~~~~~~~~~~~~----~~~~~~~------~~l~~a~~----~------~~~~r~v~~Ss~~vy~~~~~~~~~ 178 (364)
..+|+++|+++......... +...... .++..++. . .+..++|++||...+....
T Consensus 86 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iV~isS~a~~~~~~----- 160 (319)
T 3ioy_A 86 GPVSILCNNAGVNLFQPIEESSYDDWDWLLGVNLHGVVNGVTTFVPRMVERVKAGEQKGGHVVNTASMAAFLAAG----- 160 (319)
T ss_dssp CCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTSCCCCEEEEECCGGGTCCCS-----
T ss_pred CCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhhccCCCCcEEEEecccccccCCC-----
Confidence 35799999987543322111 1111112 22222222 2 1346899999976553221
Q ss_pred CCCCCCCCChhHHHHHHHHHHHHHhhh---hcCCcEEEEEecceecCCCChH---HHHHHhcCcc-cccccccC-Ccccc
Q 017914 179 EDYPANPTTELGRLRLSAEKGWLNLGR---DLGISAQVFRLGGIYGPGRSSV---DTIIKQLPLS-EGQKMRRA-RQYTS 250 (364)
Q Consensus 179 E~~~~~~~~~Y~~sK~~~E~~~~~~~~---~~~~~~~ilRp~~v~g~~~~~~---~~~~~~~~~~-~~~~~~~~-~~~~~ 250 (364)
....|+.+|.+.+.+.+.++. ..|+++++|+||.+.++..... .......... ........ .....
T Consensus 161 ------~~~~Y~aSKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (319)
T 3ioy_A 161 ------SPGIYNTTKFAVRGLSESLHYSLLKYEIGVSVLCPGLVKSYIYASDDIRPDALKGEVKPVDKTAVERLAGVHEF 234 (319)
T ss_dssp ------SSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCCBC-----------------------------CCGGGS
T ss_pred ------CCHHHHHHHHHHHHHHHHHHHHhhhcCCEEEEEEcCeEccCcccccccCchhhcccccchhHHHHHHHHHhhhc
Confidence 236799999977777666543 3489999999999977542211 0000000000 00000000 11112
Q ss_pred cccHHHHHHHHHHHccCCC
Q 017914 251 RIHVDDICQVLSASIDKPS 269 (364)
Q Consensus 251 ~i~v~Dva~~~~~~l~~~~ 269 (364)
.++++|+|++++.+++++.
T Consensus 235 ~~~pe~vA~~~~~al~~~~ 253 (319)
T 3ioy_A 235 GMEPDVIGARVIEAMKANR 253 (319)
T ss_dssp SBCHHHHHHHHHHHHHTTC
T ss_pred CCCHHHHHHHHHHHHHcCC
Confidence 2789999999999999853
|
| >4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1} | Back alignment and structure |
|---|
Probab=99.71 E-value=5.1e-16 Score=131.78 Aligned_cols=199 Identities=12% Similarity=-0.004 Sum_probs=135.2
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCChhhH-----HhhccCceeeEEEEe
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETAL-----MILTTLKNYTHLLVS 130 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~-----~~~~~~d~v~~~~~~ 130 (364)
..+|++|||| ++.||+++++.|.++|++|++.+|+.+........++..+.+|++|++. +.+..+|+++|.++.
T Consensus 9 f~GK~alVTGas~GIG~aia~~la~~Ga~Vv~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~g~iDiLVNNAGi 88 (242)
T 4b79_A 9 YAGQQVLVTGGSSGIGAAIAMQFAELGAEVVALGLDADGVHAPRHPRIRREELDITDSQRLQRLFEALPRLDVLVNNAGI 88 (242)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTSTTSCCCTTEEEEECCTTCHHHHHHHHHHCSCCSEEEECCCC
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHhhhhcCCeEEEEecCCCHHHHHHHHHhcCCCCEEEECCCC
Confidence 4689999998 8999999999999999999999999877665555678899999999764 334567888888765
Q ss_pred cCCCCCCCCh--hhhHHHHH----------HHHhhcCCccEEEEEccceeecCCCCccccCCCCCCCCChhHHHHHHHHH
Q 017914 131 IPPLEGTGDP--MLKHGELL----------RSTLMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANPTTELGRLRLSAEK 198 (364)
Q Consensus 131 ~~~~~~~~~~--~~~~~~~l----------~~a~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~~sK~~~E~ 198 (364)
..+....... ......|+ +..+++.+ .++|++||...+... .....|+.+|.....
T Consensus 89 ~~~~~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~~~-G~IVnisS~~~~~~~-----------~~~~~Y~asKaav~~ 156 (242)
T 4b79_A 89 SRDREEYDLATFERVLRLNLSAAMLASQLARPLLAQRG-GSILNIASMYSTFGS-----------ADRPAYSASKGAIVQ 156 (242)
T ss_dssp CCGGGGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHHHC-EEEEEECCGGGTSCC-----------SSCHHHHHHHHHHHH
T ss_pred CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CeEEEEeeccccCCC-----------CCCHHHHHHHHHHHH
Confidence 3322111110 01111222 22222333 689999987533111 123579999999999
Q ss_pred HHHHhhhh---cCCcEEEEEecceecCCCC-------hHHHHHHhcCcccccccccCCcccccccHHHHHHHHHHHccCC
Q 017914 199 GWLNLGRD---LGISAQVFRLGGIYGPGRS-------SVDTIIKQLPLSEGQKMRRARQYTSRIHVDDICQVLSASIDKP 268 (364)
Q Consensus 199 ~~~~~~~~---~~~~~~ilRp~~v~g~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~ 268 (364)
+.+.++.+ .|+++..|-||.+..+... ....+....+++. +-..+|+|.+++.++...
T Consensus 157 ltr~lA~Ela~~gIrVNaV~PG~i~T~m~~~~~~~~~~~~~~~~~~PlgR------------~g~peeiA~~v~fLaSd~ 224 (242)
T 4b79_A 157 LTRSLACEYAAERIRVNAIAPGWIDTPLGAGLKADVEATRRIMQRTPLAR------------WGEAPEVASAAAFLCGPG 224 (242)
T ss_dssp HHHHHHHHHGGGTEEEEEEEECSBCCC-----CCCHHHHHHHHHTCTTCS------------CBCHHHHHHHHHHHTSGG
T ss_pred HHHHHHHHhhhcCeEEEEEEeCCCCChhhhcccCCHHHHHHHHhcCCCCC------------CcCHHHHHHHHHHHhCch
Confidence 99888754 4899999999998765311 1222222222221 245899999999998754
Q ss_pred C---CCceEEEeCC
Q 017914 269 S---AWNVYNVVDD 279 (364)
Q Consensus 269 ~---~g~~~~i~~~ 279 (364)
. .|+++.+.+|
T Consensus 225 a~~iTG~~l~VDGG 238 (242)
T 4b79_A 225 ASFVTGAVLAVDGG 238 (242)
T ss_dssp GTTCCSCEEEESTT
T ss_pred hcCccCceEEECcc
Confidence 3 3899988776
|
| >1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A* | Back alignment and structure |
|---|
Probab=99.71 E-value=2.1e-16 Score=137.07 Aligned_cols=211 Identities=12% Similarity=0.081 Sum_probs=128.8
Q ss_pred CCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhh---hCCceEEEccCChhh-H-----HhhccCceeeEEE
Q 017914 59 PNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELE---QSGFDVHLFNANETA-L-----MILTTLKNYTHLL 128 (364)
Q Consensus 59 ~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~---~~~~~~~~~D~~~~~-~-----~~~~~~d~v~~~~ 128 (364)
|++||||| +|+||++++++|+++|++|++++|+.++.+.+. ..+.+++..|..+.+ . ..+..+|+++|++
T Consensus 1 Mk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lv~nA 80 (254)
T 1zmt_A 1 MSTAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFAETYPQLKPMSEQEPAELIEAVTSAYGQVDVLVSND 80 (254)
T ss_dssp -CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHCTTSEECCCCSHHHHHHHHHHHHSCCCEEEEEC
T ss_pred CeEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCcEEEECHHHHHHHHHHHHHHhCCCCEEEECC
Confidence 46899999 999999999999999999999999876544332 112222222554432 1 2234789999999
Q ss_pred EecCCCCCCCC-----hhhhHHHH------HHHH----hhcCCccEEEEEccceeecCCCCccccCCCCCCCCChhHHHH
Q 017914 129 VSIPPLEGTGD-----PMLKHGEL------LRST----LMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANPTTELGRLR 193 (364)
Q Consensus 129 ~~~~~~~~~~~-----~~~~~~~~------l~~a----~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~~sK 193 (364)
+.........+ .......| +..+ +++.+..++|++||...+.. ......|+.+|
T Consensus 81 g~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-----------~~~~~~Y~~sK 149 (254)
T 1zmt_A 81 IFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPFGP-----------WKELSTYTSAR 149 (254)
T ss_dssp CCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTTSC-----------CTTCHHHHHHH
T ss_pred CcCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCcccccC-----------CCCchHHHHHH
Confidence 86512111111 11111122 2222 23445679999999765422 12346899999
Q ss_pred HHHHHHHHHhhhh---cCCcEEEEEecceecCCCChH--HHHHHhcCcccccccccCCcccccccHHHHHHHHHHHccCC
Q 017914 194 LSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRSSV--DTIIKQLPLSEGQKMRRARQYTSRIHVDDICQVLSASIDKP 268 (364)
Q Consensus 194 ~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~ 268 (364)
...+.+.+.++.+ .|+++++++||.++|+....+ ..+..... ..............+.+.+|+|++++.++...
T Consensus 150 ~a~~~~~~~la~e~~~~gi~v~~v~PG~v~~~~~~~~~~T~~~~~~~-~~~~~~~~~~p~~~~~~p~dvA~~v~~l~s~~ 228 (254)
T 1zmt_A 150 AGACTLANALSKELGEYNIPVFAIGPNYLHSEDSPYFYPTEPWKTNP-EHVAHVKKVTALQRLGTQKELGELVAFLASGS 228 (254)
T ss_dssp HHHHHHHHHHHHHHGGGTCCEEEEEESSBCCBTCCSSCBHHHHTTCH-HHHHHHHHHSSSSSCBCHHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHHhhhcCcEEEEEecCccccccccccCCCcccccCh-HHHHHHhccCCCCCCcCHHHHHHHHHHHhCcc
Confidence 9999999888654 489999999999977652210 11111000 00000000001123578999999999998865
Q ss_pred C---CCceEEEeCCCC
Q 017914 269 S---AWNVYNVVDDDP 281 (364)
Q Consensus 269 ~---~g~~~~i~~~~~ 281 (364)
. .|+.+++.+|..
T Consensus 229 ~~~~tG~~~~vdgG~~ 244 (254)
T 1zmt_A 229 CDYLTGQVFWLAGGFP 244 (254)
T ss_dssp CGGGTTCEEEESTTCC
T ss_pred cCCccCCEEEECCCch
Confidence 3 488999987743
|
| >3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A | Back alignment and structure |
|---|
Probab=99.71 E-value=9.4e-16 Score=134.18 Aligned_cols=212 Identities=10% Similarity=-0.018 Sum_probs=133.9
Q ss_pred CCCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCch-hhhhh----hh--CCceEEEccCChhhH--Hhh-------
Q 017914 56 WQSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVM-KKKEL----EQ--SGFDVHLFNANETAL--MIL------- 118 (364)
Q Consensus 56 ~~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~-~~~~l----~~--~~~~~~~~D~~~~~~--~~~------- 118 (364)
...++++|||| +|+||++++++|+++|++|++++++.. ..+.+ .. .++.++.+|++|.+. ..+
T Consensus 15 ~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 94 (270)
T 3is3_A 15 RLDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIAIKADIRQVPEIVKLFDQAVAHF 94 (270)
T ss_dssp CCTTCEEEESCTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CcCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 45678999999 999999999999999999999877543 22222 11 457889999999763 222
Q ss_pred ccCceeeEEEEecCCCCCC----CChhhhHHHH------HHHHhhcC--CccEEEEEccceeecCCCCccccCCCCCCCC
Q 017914 119 TTLKNYTHLLVSIPPLEGT----GDPMLKHGEL------LRSTLMNG--HLQWLGYLSSTGVYGHSGGAWVDEDYPANPT 186 (364)
Q Consensus 119 ~~~d~v~~~~~~~~~~~~~----~~~~~~~~~~------l~~a~~~~--~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~ 186 (364)
..+|+++|+++........ .+.......| +..++... ...++|++||.... ..+..+.
T Consensus 95 g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~~~----------~~~~~~~ 164 (270)
T 3is3_A 95 GHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVLTSSNTSK----------DFSVPKH 164 (270)
T ss_dssp SCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCTTTT----------TCCCTTC
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEEEeCchhc----------cCCCCCC
Confidence 3689999998765432211 1111112223 22332211 13489999986411 0122245
Q ss_pred ChhHHHHHHHHHHHHHhhhh---cCCcEEEEEecceecCCCChHHHHHHhc-----Cccc---ccccccCCcccccccHH
Q 017914 187 TELGRLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRSSVDTIIKQL-----PLSE---GQKMRRARQYTSRIHVD 255 (364)
Q Consensus 187 ~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~-----~~~~---~~~~~~~~~~~~~i~v~ 255 (364)
..|+.+|...+.+.+.++.+ .|++++.|+||.+..+... ...... .... ............+.+++
T Consensus 165 ~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~ 241 (270)
T 3is3_A 165 SLYSGSKGAVDSFVRIFSKDCGDKKITVNAVAPGGTVTDMFH---EVSHHYIPNGTSYTAEQRQQMAAHASPLHRNGWPQ 241 (270)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTTHH---HHGGGGSTTGGGSCHHHHHHHHHHHSTTCSCBCHH
T ss_pred chhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCCccChhhh---hhhhhccccccccchHHHHHHHHhcCCCCCCCCHH
Confidence 68999999999999988765 4899999999999876421 000000 0000 00000011123357799
Q ss_pred HHHHHHHHHccCC---CCCceEEEeCCC
Q 017914 256 DICQVLSASIDKP---SAWNVYNVVDDD 280 (364)
Q Consensus 256 Dva~~~~~~l~~~---~~g~~~~i~~~~ 280 (364)
|+|++++.++... -.|+++++.+|.
T Consensus 242 dvA~~v~~L~s~~~~~itG~~i~vdGG~ 269 (270)
T 3is3_A 242 DVANVVGFLVSKEGEWVNGKVLTLDGGA 269 (270)
T ss_dssp HHHHHHHHHTSGGGTTCCSCEEEESTTC
T ss_pred HHHHHHHHHcCCccCCccCcEEEeCCCC
Confidence 9999999999754 248999998774
|
| >3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1} | Back alignment and structure |
|---|
Probab=99.70 E-value=2.7e-16 Score=136.96 Aligned_cols=211 Identities=6% Similarity=-0.053 Sum_probs=129.1
Q ss_pred CCCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhh-------hh--CCceEEEccCChhhH--Hhh-----
Q 017914 56 WQSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKEL-------EQ--SGFDVHLFNANETAL--MIL----- 118 (364)
Q Consensus 56 ~~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l-------~~--~~~~~~~~D~~~~~~--~~~----- 118 (364)
...+++||||| +|+||++++++|+++|++|++++|...+.+.+ .. .++.++.+|++|.+. ..+
T Consensus 8 ~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 87 (262)
T 3ksu_A 8 DLKNKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQGAKVALYQSDLSNEEEVAKLFDFAEK 87 (262)
T ss_dssp CCTTCEEEEETCSSHHHHHHHHHHTTSSCEEEEEESCGGGHHHHHHHHHHHHTTTCEEEEEECCCCSHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecCccCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHH
Confidence 35568999999 99999999999999999999998864432221 11 357789999999764 222
Q ss_pred --ccCceeeEEEEecCCCCCCCCh----hhhHHHHHHH------Hhhc--CCccEEEEEccceeecCCCCccccCCCCCC
Q 017914 119 --TTLKNYTHLLVSIPPLEGTGDP----MLKHGELLRS------TLMN--GHLQWLGYLSSTGVYGHSGGAWVDEDYPAN 184 (364)
Q Consensus 119 --~~~d~v~~~~~~~~~~~~~~~~----~~~~~~~l~~------a~~~--~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~ 184 (364)
..+|+++|+++........... ......|+.. ++.. .+..++|++||...+....
T Consensus 88 ~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~isS~~~~~~~~----------- 156 (262)
T 3ksu_A 88 EFGKVDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMNPNGHIITIATSLLAAYTG----------- 156 (262)
T ss_dssp HHCSEEEEEECCCCCCSSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEECCCHHHHHHC-----------
T ss_pred HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCEEEEEechhhccCCC-----------
Confidence 3689999988765432211111 1112233332 2222 1346899999876553211
Q ss_pred CCChhHHHHHHHHHHHHHhhhhc---CCcEEEEEecceecCCCChHHHHHHhcCcc-cccccccCCcccccccHHHHHHH
Q 017914 185 PTTELGRLRLSAEKGWLNLGRDL---GISAQVFRLGGIYGPGRSSVDTIIKQLPLS-EGQKMRRARQYTSRIHVDDICQV 260 (364)
Q Consensus 185 ~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~v~Dva~~ 260 (364)
....|+.+|.+.+.+.+.++.+. |++++.+.||.+..+. ....... .............+...+|+|++
T Consensus 157 ~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~-------~~~~~~~~~~~~~~~~~~~~r~~~pedvA~~ 229 (262)
T 3ksu_A 157 FYSTYAGNKAPVEHYTRAASKELMKQQISVNAIAPGPMDTSF-------FYGQETKESTAFHKSQAMGNQLTKIEDIAPI 229 (262)
T ss_dssp CCCC-----CHHHHHHHHHHHHTTTTTCEEEEEEECCCCTHH-------HHTCC------------CCCCSCCGGGTHHH
T ss_pred CCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCcc-------ccccCchHHHHHHHhcCcccCCCCHHHHHHH
Confidence 23579999999999999887654 8999999999886431 1100000 00000111112345789999999
Q ss_pred HHHHccCC--CCCceEEEeCCCCCCH
Q 017914 261 LSASIDKP--SAWNVYNVVDDDPAPR 284 (364)
Q Consensus 261 ~~~~l~~~--~~g~~~~i~~~~~~s~ 284 (364)
++.++... -.|+.+++.+|.....
T Consensus 230 v~~L~s~~~~itG~~i~vdGg~~~~~ 255 (262)
T 3ksu_A 230 IKFLTTDGWWINGQTIFANGGYTTRE 255 (262)
T ss_dssp HHHHHTTTTTCCSCEEEESTTCCCC-
T ss_pred HHHHcCCCCCccCCEEEECCCccCCC
Confidence 99998763 2389999988765443
|
| >1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ... | Back alignment and structure |
|---|
Probab=99.70 E-value=2.2e-16 Score=139.41 Aligned_cols=189 Identities=10% Similarity=-0.007 Sum_probs=125.4
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhh-------CCceEEEccCChhhH--Hhh-------c
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQ-------SGFDVHLFNANETAL--MIL-------T 119 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~-------~~~~~~~~D~~~~~~--~~~-------~ 119 (364)
..+++||||| +|+||++++++|+++|++|++++|+.++...+.. .++.++.+|++|.+. ..+ .
T Consensus 26 ~~~k~vlITGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g 105 (286)
T 1xu9_A 26 LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLMG 105 (286)
T ss_dssp GTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHHT
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHHHHHHcC
Confidence 4568999999 9999999999999999999999998776544321 257889999999653 222 3
Q ss_pred cCceeeEEEEecCCCCCCCCh----hhhHHHH------HHHHhh---cCCccEEEEEccceeecCCCCccccCCCCCCCC
Q 017914 120 TLKNYTHLLVSIPPLEGTGDP----MLKHGEL------LRSTLM---NGHLQWLGYLSSTGVYGHSGGAWVDEDYPANPT 186 (364)
Q Consensus 120 ~~d~v~~~~~~~~~~~~~~~~----~~~~~~~------l~~a~~---~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~ 186 (364)
.+|+++|+++........... ......| +..++. ..+.+++|++||...+.. ..+.
T Consensus 106 ~iD~li~naag~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~-----------~~~~ 174 (286)
T 1xu9_A 106 GLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSNGSIVVVSSLAGKVA-----------YPMV 174 (286)
T ss_dssp SCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEGGGTSC-----------CTTC
T ss_pred CCCEEEECCccCCCCccccCCHHHHHHHHHHHhhHHHHHHHHHHHHHHHCCCEEEEECCcccccC-----------CCCc
Confidence 789999994332222111111 1111222 222221 112368999999765422 1234
Q ss_pred ChhHHHHHHHHHHHHHhhhh-----cCCcEEEEEecceecCCCChHHHHHHhcCcccccccccCCcccccccHHHHHHHH
Q 017914 187 TELGRLRLSAEKGWLNLGRD-----LGISAQVFRLGGIYGPGRSSVDTIIKQLPLSEGQKMRRARQYTSRIHVDDICQVL 261 (364)
Q Consensus 187 ~~Y~~sK~~~E~~~~~~~~~-----~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~ 261 (364)
..|+.+|...|.+++.++.+ .++++++++||.+..+. .. ... . +.....+++.+|+|+.+
T Consensus 175 ~~Y~asK~a~~~~~~~l~~e~~~~~~~i~v~~v~Pg~v~t~~---~~---~~~--~-------~~~~~~~~~~~~vA~~i 239 (286)
T 1xu9_A 175 AAYSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTET---AM---KAV--S-------GIVHMQAAPKEECALEI 239 (286)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEECCBCCHH---HH---HHS--C-------GGGGGGCBCHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeecCccCChh---HH---Hhc--c-------ccccCCCCCHHHHHHHH
Confidence 68999999999999887654 38999999999886431 11 110 0 01123458899999999
Q ss_pred HHHccCCCCC
Q 017914 262 SASIDKPSAW 271 (364)
Q Consensus 262 ~~~l~~~~~g 271 (364)
+.++..+..+
T Consensus 240 ~~~~~~~~~~ 249 (286)
T 1xu9_A 240 IKGGALRQEE 249 (286)
T ss_dssp HHHHHTTCSE
T ss_pred HHHHhcCCce
Confidence 9999876543
|
| >3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=99.70 E-value=5.8e-16 Score=133.86 Aligned_cols=187 Identities=11% Similarity=0.049 Sum_probs=125.4
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhh---------CCceEEEccCChhhH--Hhh------
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQ---------SGFDVHLFNANETAL--MIL------ 118 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~---------~~~~~~~~D~~~~~~--~~~------ 118 (364)
..++++|||| +|+||++++++|+++|++|++++|+.++.+.+.+ ..+.++.+|++|.+. ..+
T Consensus 5 ~~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 84 (250)
T 3nyw_A 5 KQKGLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIKDIHQK 84 (250)
T ss_dssp CCCCEEEEESTTSHHHHHHHHHHHHHTCEEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCHHHHHHHHHHHHHh
Confidence 4468999999 9999999999999999999999998876544321 457889999999663 222
Q ss_pred -ccCceeeEEEEecCCCCCCCChhh----hHHHH------HHHH----hhcCCccEEEEEccceeecCCCCccccCCCCC
Q 017914 119 -TTLKNYTHLLVSIPPLEGTGDPML----KHGEL------LRST----LMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPA 183 (364)
Q Consensus 119 -~~~d~v~~~~~~~~~~~~~~~~~~----~~~~~------l~~a----~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~ 183 (364)
..+|+++|+++....... ..... ....| +..+ ++..+..++|++||...+.. .
T Consensus 85 ~g~iD~lvnnAg~~~~~~~-~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~-----------~ 152 (250)
T 3nyw_A 85 YGAVDILVNAAAMFMDGSL-SEPVDNFRKIMEINVIAQYGILKTVTEIMKVQKNGYIFNVASRAAKYG-----------F 152 (250)
T ss_dssp HCCEEEEEECCCCCCCCCC-SCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECC------------------
T ss_pred cCCCCEEEECCCcCCCCCC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEEccHHhcCC-----------C
Confidence 368999999876443221 21111 11222 2222 23445679999998754321 1
Q ss_pred CCCChhHHHHHHHHHHHHHhhhh---cCCcEEEEEecceecCCCChHHHHHHhcCcccccccccCCcccccccHHHHHHH
Q 017914 184 NPTTELGRLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRSSVDTIIKQLPLSEGQKMRRARQYTSRIHVDDICQV 260 (364)
Q Consensus 184 ~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~ 260 (364)
.+...|+.+|.+.+.+.+.++.+ .|++++.++||.+..+. ..... . ......+++.+|+|++
T Consensus 153 ~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~-------~~~~~--~------~~~~~~~~~p~dva~~ 217 (250)
T 3nyw_A 153 ADGGIYGSTKFALLGLAESLYRELAPLGIRVTTLCPGWVNTDM-------AKKAG--T------PFKDEEMIQPDDLLNT 217 (250)
T ss_dssp CCTTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSHH-------HHHTT--C------CSCGGGSBCHHHHHHH
T ss_pred CCCcchHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCch-------hhhcC--C------CcccccCCCHHHHHHH
Confidence 13468999999999999888755 48999999999886431 11110 0 0111336889999999
Q ss_pred HHHHccCCCC
Q 017914 261 LSASIDKPSA 270 (364)
Q Consensus 261 ~~~~l~~~~~ 270 (364)
++.++..+..
T Consensus 218 v~~l~s~~~~ 227 (250)
T 3nyw_A 218 IRCLLNLSEN 227 (250)
T ss_dssp HHHHHTSCTT
T ss_pred HHHHHcCCCc
Confidence 9999987643
|
| >3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str} | Back alignment and structure |
|---|
Probab=99.69 E-value=3.7e-16 Score=135.62 Aligned_cols=205 Identities=10% Similarity=-0.003 Sum_probs=131.5
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEE-eCchhhhhh----hh--CCceEEEccCChhhH--Hhhc-------
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTC-TNVMKKKEL----EQ--SGFDVHLFNANETAL--MILT------- 119 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~-r~~~~~~~l----~~--~~~~~~~~D~~~~~~--~~~~------- 119 (364)
..+++||||| +|+||++++++|+++|++|+++. |+.+..... .. ..+.++.+|++|.+. ..++
T Consensus 5 l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 84 (255)
T 3icc_A 5 LKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQ 84 (255)
T ss_dssp TTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCSHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHH
T ss_pred cCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhcCCceEEEecCcCCHHHHHHHHHHHHHHhc
Confidence 4568999999 99999999999999999999874 444433222 11 356788899999653 2111
Q ss_pred ------cCceeeEEEEecCCCCCCCChh----hhHHHH------HHHHhhcC--CccEEEEEccceeecCCCCccccCCC
Q 017914 120 ------TLKNYTHLLVSIPPLEGTGDPM----LKHGEL------LRSTLMNG--HLQWLGYLSSTGVYGHSGGAWVDEDY 181 (364)
Q Consensus 120 ------~~d~v~~~~~~~~~~~~~~~~~----~~~~~~------l~~a~~~~--~~~r~v~~Ss~~vy~~~~~~~~~E~~ 181 (364)
.+|.++|+++............ .....| +..++... +..++|++||...+...
T Consensus 85 ~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~isS~~~~~~~--------- 155 (255)
T 3icc_A 85 NRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAATRISL--------- 155 (255)
T ss_dssp HHHSSSCEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGGGTSCC---------
T ss_pred ccccCCcccEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHhhCCCCEEEEeCChhhccCC---------
Confidence 2899999887543221111111 112223 33333221 24589999997654322
Q ss_pred CCCCCChhHHHHHHHHHHHHHhhhh---cCCcEEEEEecceecCCCChH---HHHHHhcCcccccccccCCcccccccHH
Q 017914 182 PANPTTELGRLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRSSV---DTIIKQLPLSEGQKMRRARQYTSRIHVD 255 (364)
Q Consensus 182 ~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~i~v~ 255 (364)
.....|+.+|.+.+.+.+.++.+ .+++++.++||.+..+..... ....... ........+.+++
T Consensus 156 --~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~ 225 (255)
T 3icc_A 156 --PDFIAYSMTKGAINTMTFTLAKQLGARGITVNAILPGFVKTDMNAELLSDPMMKQYA--------TTISAFNRLGEVE 225 (255)
T ss_dssp --TTBHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCSSSTTTTTSHHHHHHH--------HHTSTTSSCBCHH
T ss_pred --CCcchhHHhHHHHHHHHHHHHHHHHhcCeEEEEEEEeeecccchhhhcccHHHHHhh--------hccCCcCCCCCHH
Confidence 13368999999999999888755 489999999999987643211 0000000 0001123357899
Q ss_pred HHHHHHHHHccCC---CCCceEEEeCCC
Q 017914 256 DICQVLSASIDKP---SAWNVYNVVDDD 280 (364)
Q Consensus 256 Dva~~~~~~l~~~---~~g~~~~i~~~~ 280 (364)
|+|++++.++... -.|+++++.+|.
T Consensus 226 dva~~~~~l~s~~~~~~tG~~i~vdgG~ 253 (255)
T 3icc_A 226 DIADTAAFLASPDSRWVTGQLIDVSGGS 253 (255)
T ss_dssp HHHHHHHHHHSGGGTTCCSCEEEESSST
T ss_pred HHHHHHHHHhCcccCCccCCEEEecCCe
Confidence 9999999988654 348999998875
|
| >3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A* | Back alignment and structure |
|---|
Probab=99.69 E-value=1.6e-15 Score=133.38 Aligned_cols=210 Identities=10% Similarity=-0.006 Sum_probs=134.0
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhh---CCceEEEccCChhhH--Hh-------hccCce
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQ---SGFDVHLFNANETAL--MI-------LTTLKN 123 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~---~~~~~~~~D~~~~~~--~~-------~~~~d~ 123 (364)
..++++|||| +|+||++++++|+++|++|++++|+.+....+.. .++.++.+|++|.+. .. +..+|+
T Consensus 3 l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~ 82 (281)
T 3zv4_A 3 LTGEVALITGGASGLGRALVDRFVAEGARVAVLDKSAERLRELEVAHGGNAVGVVGDVRSLQDQKRAAERCLAAFGKIDT 82 (281)
T ss_dssp TTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTBTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHHHHHhcCCCCE
Confidence 4568999999 9999999999999999999999998876555432 467889999999663 22 246799
Q ss_pred eeEEEEecCCCCCCC----C-----hhhhHHHHH------HHHh----hcCCccEEEEEccceeecCCCCccccCCCCCC
Q 017914 124 YTHLLVSIPPLEGTG----D-----PMLKHGELL------RSTL----MNGHLQWLGYLSSTGVYGHSGGAWVDEDYPAN 184 (364)
Q Consensus 124 v~~~~~~~~~~~~~~----~-----~~~~~~~~l------~~a~----~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~ 184 (364)
++|+++......... + .......|+ ..++ .+.+ .++|++||...+.. ..
T Consensus 83 lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~-----------~~ 150 (281)
T 3zv4_A 83 LIPNAGIWDYSTALADLPEDKIDAAFDDIFHVNVKGYIHAVKACLPALVSSR-GSVVFTISNAGFYP-----------NG 150 (281)
T ss_dssp EECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGTSS-----------SS
T ss_pred EEECCCcCccccccccCChhhhHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-CeEEEEecchhccC-----------CC
Confidence 999998654322111 1 001111222 2222 2222 58999998764421 12
Q ss_pred CCChhHHHHHHHHHHHHHhhhhc--CCcEEEEEecceecCCCChH-----HHHHHhcCcccccccccCCcccccccHHHH
Q 017914 185 PTTELGRLRLSAEKGWLNLGRDL--GISAQVFRLGGIYGPGRSSV-----DTIIKQLPLSEGQKMRRARQYTSRIHVDDI 257 (364)
Q Consensus 185 ~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~ilRp~~v~g~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dv 257 (364)
....|+.+|...+.+.+.++.+. .++++.|.||.+..+..... ......... ............+...+|+
T Consensus 151 ~~~~Y~asKaa~~~l~~~la~e~~~~Irvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~--~~~~~~~~p~~r~~~pedv 228 (281)
T 3zv4_A 151 GGPLYTATKHAVVGLVRQMAFELAPHVRVNGVAPGGMNTDLRGPSSLGLSEQSISSVPL--ADMLKSVLPIGRMPALEEY 228 (281)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEECSSCC--CCCTTCC--------CCH--HHHHHHTCTTSSCCCGGGG
T ss_pred CCchhHHHHHHHHHHHHHHHHHhcCCCEEEEEECCcCcCCcccccccccccccccchhH--HHHHHhcCCCCCCCCHHHH
Confidence 34679999999999999987654 39999999999876532110 000000000 0000000112235778999
Q ss_pred HHHHHHHccC-C---CCCceEEEeCCC
Q 017914 258 CQVLSASIDK-P---SAWNVYNVVDDD 280 (364)
Q Consensus 258 a~~~~~~l~~-~---~~g~~~~i~~~~ 280 (364)
|++++.++.. . -.|+++++.+|.
T Consensus 229 A~~v~fL~s~~~~~~itG~~i~vdGG~ 255 (281)
T 3zv4_A 229 TGAYVFFATRGDSLPATGALLNYDGGM 255 (281)
T ss_dssp SHHHHHHHSTTTSTTCSSCEEEESSSG
T ss_pred HHHHHHhhcccccccccCcEEEECCCC
Confidence 9999999983 3 248999998874
|
| >3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.68 E-value=7.3e-16 Score=133.06 Aligned_cols=195 Identities=14% Similarity=0.043 Sum_probs=129.6
Q ss_pred CCCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhh-------CCceEEEccC--ChhhH--Hh------
Q 017914 56 WQSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQ-------SGFDVHLFNA--NETAL--MI------ 117 (364)
Q Consensus 56 ~~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~-------~~~~~~~~D~--~~~~~--~~------ 117 (364)
...+++||||| +|+||++++++|+++|++|++++|+.++...+.+ .+..++.+|+ ++.+. ..
T Consensus 11 ~l~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~d~~~~~~~~~~~~~~~~ 90 (247)
T 3i1j_A 11 LLKGRVILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAGQPQPLIIALNLENATAQQYRELAARVEH 90 (247)
T ss_dssp TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTSCCCEEEECCTTTCCHHHHHHHHHHHHH
T ss_pred cCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCCCceEEEeccccCCHHHHHHHHHHHHH
Confidence 45678999999 9999999999999999999999998776554321 4567788888 66542 11
Q ss_pred -hccCceeeEEEEecCCCCCCCC-----hhhhHHH------HHHHHh----hcCCccEEEEEccceeecCCCCccccCCC
Q 017914 118 -LTTLKNYTHLLVSIPPLEGTGD-----PMLKHGE------LLRSTL----MNGHLQWLGYLSSTGVYGHSGGAWVDEDY 181 (364)
Q Consensus 118 -~~~~d~v~~~~~~~~~~~~~~~-----~~~~~~~------~l~~a~----~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~ 181 (364)
+..+|.++|+++.........+ ....... ++..++ ++.+..++|++||...+..
T Consensus 91 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~---------- 160 (247)
T 3i1j_A 91 EFGRLDGLLHNASIIGPRTPLEQLPDEDFMQVMHVNVNATFMLTRALLPLLKRSEDASIAFTSSSVGRKG---------- 160 (247)
T ss_dssp HHSCCSEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSEEEEEECCGGGTSC----------
T ss_pred hCCCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCeEEEEcchhhcCC----------
Confidence 2378999999986543222111 1111122 222332 4556679999998754322
Q ss_pred CCCCCChhHHHHHHHHHHHHHhhhh----cCCcEEEEEecceecCCCChHHHHHHhcCcccccccccCCcccccccHHHH
Q 017914 182 PANPTTELGRLRLSAEKGWLNLGRD----LGISAQVFRLGGIYGPGRSSVDTIIKQLPLSEGQKMRRARQYTSRIHVDDI 257 (364)
Q Consensus 182 ~~~~~~~Y~~sK~~~E~~~~~~~~~----~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dv 257 (364)
......|+.+|.+.+.+.+.++.+ .+++++.++||.+..+. .. ... .. .....+...+|+
T Consensus 161 -~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~i~v~~v~PG~v~t~~---~~---~~~--~~-------~~~~~~~~p~dv 224 (247)
T 3i1j_A 161 -RANWGAYGVSKFATEGLMQTLADELEGVTAVRANSINPGATRTGM---RA---QAY--PD-------ENPLNNPAPEDI 224 (247)
T ss_dssp -CTTCHHHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEECCCCSSHH---HH---HHS--TT-------SCGGGSCCGGGG
T ss_pred -CCCcchhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCcc---ch---hcc--cc-------cCccCCCCHHHH
Confidence 123468999999999999888754 47899999999875421 11 110 00 111234678999
Q ss_pred HHHHHHHccCCC---CCceEEE
Q 017914 258 CQVLSASIDKPS---AWNVYNV 276 (364)
Q Consensus 258 a~~~~~~l~~~~---~g~~~~i 276 (364)
|++++.++.... .|+.+++
T Consensus 225 a~~~~~l~s~~~~~itG~~i~~ 246 (247)
T 3i1j_A 225 MPVYLYLMGPDSTGINGQALNA 246 (247)
T ss_dssp THHHHHHHSGGGTTCCSCEEEC
T ss_pred HHHHHHHhCchhccccCeeecC
Confidence 999999987542 3777664
|
| >3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A | Back alignment and structure |
|---|
Probab=99.68 E-value=1.4e-15 Score=132.97 Aligned_cols=208 Identities=9% Similarity=-0.115 Sum_probs=136.2
Q ss_pred CCCCCeEEEEc-C--ChhhHHHHHHHHhCCCEEEEEEeCchhh-----hhhh---hCCceEEEccCChhhH--Hhh----
Q 017914 56 WQSPNRMLILG-M--GFVGRIFAEKIKNQGWVVSGTCTNVMKK-----KELE---QSGFDVHLFNANETAL--MIL---- 118 (364)
Q Consensus 56 ~~~~~~vlVtG-t--G~iG~~l~~~L~~~g~~V~~~~r~~~~~-----~~l~---~~~~~~~~~D~~~~~~--~~~---- 118 (364)
...+++||||| + |+||++++++|+++|++|++++|+.... ..+. ..++.++.+|++|.+. ..+
T Consensus 17 ~l~~k~vlITGas~~~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~ 96 (267)
T 3gdg_A 17 SLKGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTYGIKAKAYKCQVDSYESCEKLVKDVV 96 (267)
T ss_dssp CCTTCEEEETTCCSSSSHHHHHHHHHHHTSCEEEECBSSSSSHHHHHHHHHHHHHCCCEECCBCCTTCHHHHHHHHHHHH
T ss_pred CcCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEEeCCcchhHHHHHHHHHHhcCCceeEEecCCCCHHHHHHHHHHHH
Confidence 35678999998 8 8999999999999999999999875432 1121 2467888999999763 222
Q ss_pred ---ccCceeeEEEEecCCCCCCCCh----hhhHHHH------HHHHh----hcCCccEEEEEccceeecCCCCccccCCC
Q 017914 119 ---TTLKNYTHLLVSIPPLEGTGDP----MLKHGEL------LRSTL----MNGHLQWLGYLSSTGVYGHSGGAWVDEDY 181 (364)
Q Consensus 119 ---~~~d~v~~~~~~~~~~~~~~~~----~~~~~~~------l~~a~----~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~ 181 (364)
..+|+++|+++........... ......| +..++ ++.+..++|++||...+....
T Consensus 97 ~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~-------- 168 (267)
T 3gdg_A 97 ADFGQIDAFIANAGATADSGILDGSVEAWNHVVQVDLNGTFHCAKAVGHHFKERGTGSLVITASMSGHIANF-------- 168 (267)
T ss_dssp HHTSCCSEEEECCCCCCCSCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCS--------
T ss_pred HHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhcchHHHHHHHHHHHHHHHcCCceEEEEccccccccCC--------
Confidence 3679999998765433211111 1112222 22222 344557999999865432110
Q ss_pred CCCCCChhHHHHHHHHHHHHHhhhhcC--CcEEEEEecceecCCCChHH-HHHHhcCcccccccccCCcccccccHHHHH
Q 017914 182 PANPTTELGRLRLSAEKGWLNLGRDLG--ISAQVFRLGGIYGPGRSSVD-TIIKQLPLSEGQKMRRARQYTSRIHVDDIC 258 (364)
Q Consensus 182 ~~~~~~~Y~~sK~~~E~~~~~~~~~~~--~~~~ilRp~~v~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva 258 (364)
..+...|+.+|...+.+++.++.+.+ ++++.+.||.+..+...... ..... + ........+.+++|+|
T Consensus 169 -~~~~~~Y~~sK~a~~~~~~~la~e~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~--~------~~~~~~~r~~~~~dva 239 (267)
T 3gdg_A 169 -PQEQTSYNVAKAGCIHMARSLANEWRDFARVNSISPGYIDTGLSDFVPKETQQL--W------HSMIPMGRDGLAKELK 239 (267)
T ss_dssp -SSCCHHHHHHHHHHHHHHHHHHHHTTTTCEEEEEEECCEECSCGGGSCHHHHHH--H------HTTSTTSSCEETHHHH
T ss_pred -CCCCCcchHHHHHHHHHHHHHHHHhccCcEEEEEECCccccchhhhCCHHHHHH--H------HhcCCCCCCcCHHHHH
Confidence 11346899999999999999876653 78999999998765432111 11111 0 0011123457799999
Q ss_pred HHHHHHccCCC---CCceEEEeCCC
Q 017914 259 QVLSASIDKPS---AWNVYNVVDDD 280 (364)
Q Consensus 259 ~~~~~~l~~~~---~g~~~~i~~~~ 280 (364)
++++.++.... .|+++++.+|.
T Consensus 240 ~~~~~l~s~~~~~itG~~i~vdgG~ 264 (267)
T 3gdg_A 240 GAYVYFASDASTYTTGADLLIDGGY 264 (267)
T ss_dssp HHHHHHHSTTCTTCCSCEEEESTTG
T ss_pred hHhheeecCccccccCCEEEECCce
Confidence 99999997643 38999998774
|
| >3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile} | Back alignment and structure |
|---|
Probab=99.68 E-value=2.4e-15 Score=132.55 Aligned_cols=199 Identities=13% Similarity=0.045 Sum_probs=130.0
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhh-----------hh--hCCceEEEccCChhhH--Hhh--
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKE-----------LE--QSGFDVHLFNANETAL--MIL-- 118 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-----------l~--~~~~~~~~~D~~~~~~--~~~-- 118 (364)
..++++|||| +|.||++++++|+++|++|++++|+.++.+. +. ...+.++.+|++|.+. ..+
T Consensus 7 l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~ 86 (285)
T 3sc4_A 7 LRGKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQALPIVGDIRDGDAVAAAVAK 86 (285)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHHTSEEEEEECCTTSHHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECChhhhhhhhHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHH
Confidence 4568999999 9999999999999999999999998763211 11 1457889999999763 222
Q ss_pred -----ccCceeeEEEEecCCCCCCCChhh----hHHHHHHHH------h----hcCCccEEEEEccceeecCCCCccccC
Q 017914 119 -----TTLKNYTHLLVSIPPLEGTGDPML----KHGELLRST------L----MNGHLQWLGYLSSTGVYGHSGGAWVDE 179 (364)
Q Consensus 119 -----~~~d~v~~~~~~~~~~~~~~~~~~----~~~~~l~~a------~----~~~~~~r~v~~Ss~~vy~~~~~~~~~E 179 (364)
..+|+++|+++............. ....|+... + ++.+..++|++||...+...
T Consensus 87 ~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~------- 159 (285)
T 3sc4_A 87 TVEQFGGIDICVNNASAINLGSIEEVPLKRFDLMNGIQVRGTYAVSQSCIPHMKGRDNPHILTLSPPIRLEPK------- 159 (285)
T ss_dssp HHHHHSCCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGTTTSSSCEEEECCCCCCCSGG-------
T ss_pred HHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhhccCC-------
Confidence 378999999986543221111111 112333222 2 23456799999986543211
Q ss_pred CCCCCCCChhHHHHHHHHHHHHHhhhh---cCCcEEEEEecceecCCCChHHHHHHhcCcccccccccCCcccccccHHH
Q 017914 180 DYPANPTTELGRLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRSSVDTIIKQLPLSEGQKMRRARQYTSRIHVDD 256 (364)
Q Consensus 180 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D 256 (364)
..+...|+.+|...+.+.+.++.+ .|++++.|+||.+... ......... .. ....+...+|
T Consensus 160 ---~~~~~~Y~asKaal~~~~~~la~e~~~~gI~vn~v~PG~~v~t--~~~~~~~~~-~~----------~~~r~~~ped 223 (285)
T 3sc4_A 160 ---WLRPTPYMMAKYGMTLCALGIAEELRDAGIASNTLWPRTTVAT--AAVQNLLGG-DE----------AMARSRKPEV 223 (285)
T ss_dssp ---GSCSHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECSSCBCC--HHHHHHHTS-CC----------CCTTCBCTHH
T ss_pred ---CCCCchHHHHHHHHHHHHHHHHHHhcccCcEEEEEeCCCcccc--HHHHhhccc-cc----------cccCCCCHHH
Confidence 013368999999999999988755 5899999999853321 111111111 00 1123467899
Q ss_pred HHHHHHHHccCCC--CCceEEEeC
Q 017914 257 ICQVLSASIDKPS--AWNVYNVVD 278 (364)
Q Consensus 257 va~~~~~~l~~~~--~g~~~~i~~ 278 (364)
+|++++.++.... .|+.+.+.+
T Consensus 224 vA~~~~~l~s~~~~~tG~~i~~dg 247 (285)
T 3sc4_A 224 YADAAYVVLNKPSSYTGNTLLCED 247 (285)
T ss_dssp HHHHHHHHHTSCTTCCSCEEEHHH
T ss_pred HHHHHHHHhCCcccccceEEEEcC
Confidence 9999999998764 366665443
|
| >1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP} | Back alignment and structure |
|---|
Probab=99.67 E-value=2.7e-15 Score=129.23 Aligned_cols=201 Identities=11% Similarity=0.048 Sum_probs=125.6
Q ss_pred CCeEEEEc-CChhhHHHHHHHHhCCCEEEEE-E--eCchhhhhhhh--CCceEEEccCChhh-H-----HhhccCceeeE
Q 017914 59 PNRMLILG-MGFVGRIFAEKIKNQGWVVSGT-C--TNVMKKKELEQ--SGFDVHLFNANETA-L-----MILTTLKNYTH 126 (364)
Q Consensus 59 ~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~-~--r~~~~~~~l~~--~~~~~~~~D~~~~~-~-----~~~~~~d~v~~ 126 (364)
+|+||||| +|+||++++++|+++|++|+++ + |+.++...+.. .+.++. |..+.+ . ..+..+|+++|
T Consensus 1 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~r~~~~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~g~iD~lv~ 78 (244)
T 1zmo_A 1 MVIALVTHARHFAGPAAVEALTQDGYTVVCHDASFADAAERQRFESENPGTIAL--AEQKPERLVDATLQHGEAIDTIVS 78 (244)
T ss_dssp -CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHSTTEEEC--CCCCGGGHHHHHGGGSSCEEEEEE
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCcCCHHHHHHHHHHhCCCccc--CHHHHHHHHHHHHHHcCCCCEEEE
Confidence 37899999 9999999999999999999999 6 98766554322 133322 333322 1 12236799999
Q ss_pred EEEecCC---CCCCCC----hhhhHHHH------HHHH----hhcCCccEEEEEccceeecCCCCccccCCCCCCCCChh
Q 017914 127 LLVSIPP---LEGTGD----PMLKHGEL------LRST----LMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANPTTEL 189 (364)
Q Consensus 127 ~~~~~~~---~~~~~~----~~~~~~~~------l~~a----~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y 189 (364)
+++.... ...... .......| +..+ +++.+..++|++||...+... .....|
T Consensus 79 ~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~-----------~~~~~Y 147 (244)
T 1zmo_A 79 NDYIPRPMNRLPLEGTSEADIRQMFEALSIFPILLLQSAIAPLRAAGGASVIFITSSVGKKPL-----------AYNPLY 147 (244)
T ss_dssp CCCCCTTGGGCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCC-----------TTCTTH
T ss_pred CCCcCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhhCCCC-----------CCchHH
Confidence 9876443 111111 11111222 2222 234556799999997654321 134679
Q ss_pred HHHHHHHHHHHHHhhhh---cCCcEEEEEecceecCCC---ChHH--HHHHhcCccc-ccccccCCcccccccHHHHHHH
Q 017914 190 GRLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGR---SSVD--TIIKQLPLSE-GQKMRRARQYTSRIHVDDICQV 260 (364)
Q Consensus 190 ~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~---~~~~--~~~~~~~~~~-~~~~~~~~~~~~~i~v~Dva~~ 260 (364)
+.+|...+.+.+.++.+ .|+++++|+||.+..+.. ..+. ..... +.. ..+ ...+...+|+|++
T Consensus 148 ~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~--~~~~~~p------~~r~~~pe~vA~~ 219 (244)
T 1zmo_A 148 GPARAATVALVESAAKTLSRDGILLYAIGPNFFNNPTYFPTSDWENNPELRE--RVDRDVP------LGRLGRPDEMGAL 219 (244)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCBTTTBCHHHHHHCHHHHH--HHHHHCT------TCSCBCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCcccccccccchHHHHH--HHhcCCC------CCCCcCHHHHHHH
Confidence 99999999999888654 489999999999876543 1110 00000 000 000 1124779999999
Q ss_pred HHHHccCCC---CCceEEEeCCC
Q 017914 261 LSASIDKPS---AWNVYNVVDDD 280 (364)
Q Consensus 261 ~~~~l~~~~---~g~~~~i~~~~ 280 (364)
++.++.... .|+.+.+.+|.
T Consensus 220 v~~l~s~~~~~~tG~~i~vdgG~ 242 (244)
T 1zmo_A 220 ITFLASRRAAPIVGQFFAFTGGY 242 (244)
T ss_dssp HHHHHTTTTGGGTTCEEEESTTC
T ss_pred HHHHcCccccCccCCEEEeCCCC
Confidence 999998643 38888887763
|
| >4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius} | Back alignment and structure |
|---|
Probab=99.65 E-value=7.6e-15 Score=125.94 Aligned_cols=203 Identities=8% Similarity=-0.054 Sum_probs=135.0
Q ss_pred CCCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhh----h--CCceEEEccCChhhH---------Hhhc
Q 017914 56 WQSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELE----Q--SGFDVHLFNANETAL---------MILT 119 (364)
Q Consensus 56 ~~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~----~--~~~~~~~~D~~~~~~---------~~~~ 119 (364)
+..+|++|||| ++.||+++++.|+++|++|++.+|+.+..+.+. . ..+..+.+|++|++. +.+.
T Consensus 4 sL~gKvalVTGas~GIG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~G 83 (254)
T 4fn4_A 4 SLKNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGKEVLGVKADVSKKKDVEEFVRRTFETYS 83 (254)
T ss_dssp GGTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 35679999998 899999999999999999999999887655432 2 356789999999764 2234
Q ss_pred cCceeeEEEEecCCCCCCCC-hhh----hHHHH----------HHHHhhcCCccEEEEEccceeecCCCCccccCCCCCC
Q 017914 120 TLKNYTHLLVSIPPLEGTGD-PML----KHGEL----------LRSTLMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPAN 184 (364)
Q Consensus 120 ~~d~v~~~~~~~~~~~~~~~-~~~----~~~~~----------l~~a~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~ 184 (364)
.+|++++.|+.........+ ... ....| ++..+++.+-.++|++||...+-.. .
T Consensus 84 ~iDiLVNNAGi~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~~g~~~~-----------~ 152 (254)
T 4fn4_A 84 RIDVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFYSSRAVIPIMLKQGKGVIVNTASIAGIRGG-----------F 152 (254)
T ss_dssp CCCEEEECCCCCCTTCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCSS-----------S
T ss_pred CCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEechhhcCCC-----------C
Confidence 67888888875443222211 111 11222 2222334455799999987533111 1
Q ss_pred CCChhHHHHHHHHHHHHHhhhh---cCCcEEEEEecceecCCCC------h--HHHHHHhcCcccccccccCCccccccc
Q 017914 185 PTTELGRLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRS------S--VDTIIKQLPLSEGQKMRRARQYTSRIH 253 (364)
Q Consensus 185 ~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~------~--~~~~~~~~~~~~~~~~~~~~~~~~~i~ 253 (364)
....|+.+|.....+.+.++.+ +|+++..|-||.+-.+... . ...+..... .. .-+-.
T Consensus 153 ~~~~Y~asKaal~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~-~~----------~R~g~ 221 (254)
T 4fn4_A 153 AGAPYTVAKHGLIGLTRSIAAHYGDQGIRAVAVLPGTVKTNIGLGSSKPSELGMRTLTKLMS-LS----------SRLAE 221 (254)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSCTTSCSSCCHHHHHHHHHHHT-TC----------CCCBC
T ss_pred CChHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCCCCcccccccCCcHHHHHHHHhcCC-CC----------CCCcC
Confidence 2357999999999998888754 4899999999998655310 0 111111110 00 11245
Q ss_pred HHHHHHHHHHHccCCC---CCceEEEeCCC
Q 017914 254 VDDICQVLSASIDKPS---AWNVYNVVDDD 280 (364)
Q Consensus 254 v~Dva~~~~~~l~~~~---~g~~~~i~~~~ 280 (364)
.+|+|.+++.++.... .|+.+.+.+|-
T Consensus 222 pediA~~v~fLaSd~a~~iTG~~i~VDGG~ 251 (254)
T 4fn4_A 222 PEDIANVIVFLASDEASFVNGDAVVVDGGL 251 (254)
T ss_dssp HHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred HHHHHHHHHHHhCchhcCCcCCEEEeCCCc
Confidence 8999999999987543 48999987763
|
| >4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A | Back alignment and structure |
|---|
Probab=99.65 E-value=8.1e-15 Score=127.03 Aligned_cols=201 Identities=13% Similarity=0.018 Sum_probs=132.0
Q ss_pred CCCCCeEEEEc-CC--hhhHHHHHHHHhCCCEEEEEEeCchhhhhhh-------hCCceEEEccCChhhH---------H
Q 017914 56 WQSPNRMLILG-MG--FVGRIFAEKIKNQGWVVSGTCTNVMKKKELE-------QSGFDVHLFNANETAL---------M 116 (364)
Q Consensus 56 ~~~~~~vlVtG-tG--~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~-------~~~~~~~~~D~~~~~~---------~ 116 (364)
...+|++|||| +| .||+++++.|.++|++|++.+|+.+..+.+. ..++.++.+|++|++. +
T Consensus 3 ~l~gK~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 82 (256)
T 4fs3_A 3 NLENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQLNQPEAHLYQIDVQSDEEVINGFEQIGK 82 (256)
T ss_dssp CCTTCEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHGGGTCSSCEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence 46689999999 66 7999999999999999999999876654432 2367889999999663 2
Q ss_pred hhccCceeeEEEEecCCCC---CCCC-hhhhH----HHHHHH------Hhh--cCCccEEEEEccceeecCCCCccccCC
Q 017914 117 ILTTLKNYTHLLVSIPPLE---GTGD-PMLKH----GELLRS------TLM--NGHLQWLGYLSSTGVYGHSGGAWVDED 180 (364)
Q Consensus 117 ~~~~~d~v~~~~~~~~~~~---~~~~-~~~~~----~~~l~~------a~~--~~~~~r~v~~Ss~~vy~~~~~~~~~E~ 180 (364)
.+..+|+++|.++...... ...+ ....+ ..|+.. ++. ..+-.++|++||....-.
T Consensus 83 ~~G~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~IVnisS~~~~~~--------- 153 (256)
T 4fs3_A 83 DVGNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSLTIVAHEAKKLMPEGGSIVATTYLGGEFA--------- 153 (256)
T ss_dssp HHCCCSEEEECCCCCCGGGGTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCTTCEEEEEEECGGGTSC---------
T ss_pred HhCCCCEEEeccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCEEEEEeccccccC---------
Confidence 2346888888887543211 1111 11111 112211 111 122358999998653211
Q ss_pred CCCCCCChhHHHHHHHHHHHHHhhhh---cCCcEEEEEecceecCCCC-------hHHHHHHhcCcccccccccCCcccc
Q 017914 181 YPANPTTELGRLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRS-------SVDTIIKQLPLSEGQKMRRARQYTS 250 (364)
Q Consensus 181 ~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (364)
......|+.+|...+.+.+.++.+ +|++++.|.||.+-.+... ....+....+++.
T Consensus 154 --~~~~~~Y~asKaal~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~Pl~R------------ 219 (256)
T 4fs3_A 154 --VQNYNVMGVAKASLEANVKYLALDLGPDNIRVNAISAGPIRTLSAKGVGGFNTILKEIKERAPLKR------------ 219 (256)
T ss_dssp --CTTTHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTTCTTHHHHHHHHHHHSTTSS------------
T ss_pred --cccchhhHHHHHHHHHHHHHHHHHhCccCeEEEEEecCCCCChhhhhccCCHHHHHHHHhcCCCCC------------
Confidence 113467999999999998888754 4899999999988654311 1222222222221
Q ss_pred cccHHHHHHHHHHHccCCC---CCceEEEeCC
Q 017914 251 RIHVDDICQVLSASIDKPS---AWNVYNVVDD 279 (364)
Q Consensus 251 ~i~v~Dva~~~~~~l~~~~---~g~~~~i~~~ 279 (364)
+...+|+|++++.++.... .|+++.+.+|
T Consensus 220 ~g~peevA~~v~fL~Sd~a~~iTG~~i~VDGG 251 (256)
T 4fs3_A 220 NVDQVEVGKTAAYLLSDLSSGVTGENIHVDSG 251 (256)
T ss_dssp CCCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred CcCHHHHHHHHHHHhCchhcCccCCEEEECcC
Confidence 2458999999999887542 4899988776
|
| >2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.64 E-value=3.3e-15 Score=129.95 Aligned_cols=205 Identities=11% Similarity=0.001 Sum_probs=126.8
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhh------hCCceEEEccCChhhH--Hh--------hc
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELE------QSGFDVHLFNANETAL--MI--------LT 119 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~------~~~~~~~~~D~~~~~~--~~--------~~ 119 (364)
..++++|||| +|+||++++++|+++|++|++++|+.++...+. ..++.++.+|++|.+. .. +.
T Consensus 3 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~g 82 (260)
T 2qq5_A 3 MNGQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSLGGQCVPVVCDSSQESEVRSLFEQVDREQQG 82 (260)
T ss_dssp TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSSEEEEEECCTTSHHHHHHHHHHHHHHHTT
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCceEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence 3468999999 999999999999999999999999876554332 1357789999999663 11 23
Q ss_pred cCceeeEEEE--ec-------CCCCCCC-Chh-hhH------H----HHHHHHhhcCCccEEEEEccceeecCCCCcccc
Q 017914 120 TLKNYTHLLV--SI-------PPLEGTG-DPM-LKH------G----ELLRSTLMNGHLQWLGYLSSTGVYGHSGGAWVD 178 (364)
Q Consensus 120 ~~d~v~~~~~--~~-------~~~~~~~-~~~-~~~------~----~~l~~a~~~~~~~r~v~~Ss~~vy~~~~~~~~~ 178 (364)
.+|+++|+++ .. ....... +.+ ... . ..+...+...+..++|++||...+..
T Consensus 83 ~id~lvnnAg~g~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~------- 155 (260)
T 2qq5_A 83 RLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINNVGLRGHYFCSVYGARLMVPAGQGLIVVISSPGSLQY------- 155 (260)
T ss_dssp CCCEEEECCCTTHHHHHHTTTCCTTTSCTTHHHHHHTTTTHHHHHHHHHHHHHHGGGTCCEEEEECCGGGTSC-------
T ss_pred CceEEEECCccccccccccCCCccccCCHHHHHHHHhhcchhHHHHHHHHHHHHhhcCCcEEEEEcChhhcCC-------
Confidence 5799999984 21 1111111 111 111 1 12233333455679999999765421
Q ss_pred CCCCCCCCChhHHHHHHHHHHHHHhhhh---cCCcEEEEEecceecCCCCh-HHHHHHhcCcccccccccCCcccccccH
Q 017914 179 EDYPANPTTELGRLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRSS-VDTIIKQLPLSEGQKMRRARQYTSRIHV 254 (364)
Q Consensus 179 E~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~v 254 (364)
.+...|+.+|...+.+.+.++.+ .|+++++++||.+..+.... ...- ............. ....+...
T Consensus 156 -----~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~-~~~~~~~~~~~~~--~~~~~~~p 227 (260)
T 2qq5_A 156 -----MFNVPYGVGKAACDKLAADCAHELRRHGVSCVSLWPGIVQTELLKEHMAKE-EVLQDPVLKQFKS--AFSSAETT 227 (260)
T ss_dssp -----CSSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCCSCTTTC-------------------------CHHHHH
T ss_pred -----CCCCchHHHHHHHHHHHHHHHHHhccCCeEEEEEecCccccHHHHHhhccc-cccchhHHHHHHh--hhccCCCH
Confidence 13368999999999999888743 58999999999987764211 1000 0000000000000 01113578
Q ss_pred HHHHHHHHHHccCCC----CCceEEE
Q 017914 255 DDICQVLSASIDKPS----AWNVYNV 276 (364)
Q Consensus 255 ~Dva~~~~~~l~~~~----~g~~~~i 276 (364)
+|+|++++.++.... .|+.+..
T Consensus 228 e~va~~v~~l~s~~~~~~itG~~i~~ 253 (260)
T 2qq5_A 228 ELSGKCVVALATDPNILSLSGKVLPS 253 (260)
T ss_dssp HHHHHHHHHHHTCTTGGGGTTCEEEH
T ss_pred HHHHHHHHHHhcCcccccccceeech
Confidence 999999999997653 3655543
|
| >3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=99.64 E-value=5.4e-15 Score=129.57 Aligned_cols=194 Identities=10% Similarity=0.023 Sum_probs=126.0
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhh-----------h--hCCceEEEccCChhhH--Hhh--
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKEL-----------E--QSGFDVHLFNANETAL--MIL-- 118 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l-----------~--~~~~~~~~~D~~~~~~--~~~-- 118 (364)
..++++|||| +|.||++++++|+++|++|++++|+.++.+.+ . ...+.++.+|++|.+. ..+
T Consensus 4 l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~ 83 (274)
T 3e03_A 4 LSGKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGLALKCDIREEDQVRAAVAA 83 (274)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCSCCTTSCCCHHHHHHHHHHHTSEEEEEECCTTCHHHHHHHHHH
T ss_pred CCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeccchhhhhhHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHH
Confidence 4568999999 99999999999999999999999986542211 1 2457789999999763 222
Q ss_pred -----ccCceeeEEEEecCCCCCCCChhh----hHHHHH----------HHHhhcCCccEEEEEccceeecCCCCccccC
Q 017914 119 -----TTLKNYTHLLVSIPPLEGTGDPML----KHGELL----------RSTLMNGHLQWLGYLSSTGVYGHSGGAWVDE 179 (364)
Q Consensus 119 -----~~~d~v~~~~~~~~~~~~~~~~~~----~~~~~l----------~~a~~~~~~~r~v~~Ss~~vy~~~~~~~~~E 179 (364)
..+|+++|+++............. ....|+ +..+++.+..++|++||...+....
T Consensus 84 ~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~------ 157 (274)
T 3e03_A 84 TVDTFGGIDILVNNASAIWLRGTLDTPMKRFDLMQQVNARGSFVCAQACLPHLLQAPNPHILTLAPPPSLNPAW------ 157 (274)
T ss_dssp HHHHHSCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHTHHHHHHHHHHHHHHHTTSSSCEEEECCCCCCCCHHH------
T ss_pred HHHHcCCCCEEEECCCcccCCCcccCCHHHHHHHHhHhhHhHHHHHHHHHHHHHhcCCceEEEECChHhcCCCC------
Confidence 368999999976543221111111 112222 2223345567999999875432100
Q ss_pred CCCCCCCChhHHHHHHHHHHHHHhhhh---cCCcEEEEEecceecCCCChHHHHHHhcCcccccccccCCcccccccHHH
Q 017914 180 DYPANPTTELGRLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRSSVDTIIKQLPLSEGQKMRRARQYTSRIHVDD 256 (364)
Q Consensus 180 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D 256 (364)
......|+.+|...+.+.+.++.+ .|++++.+.||.+.... +...... .....+...+|
T Consensus 158 ---~~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~~v~T~---~~~~~~~------------~~~~~~~~ped 219 (274)
T 3e03_A 158 ---WGAHTGYTLAKMGMSLVTLGLAAEFGPQGVAINALWPRTVIATD---AINMLPG------------VDAAACRRPEI 219 (274)
T ss_dssp ---HHHCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECSBCBCC----------C------------CCGGGSBCTHH
T ss_pred ---CCCCchHHHHHHHHHHHHHHHHHHhhhcCEEEEEEECCcccccc---hhhhccc------------ccccccCCHHH
Confidence 112357999999999999888754 48999999999543321 1111110 01122577999
Q ss_pred HHHHHHHHccCCCC---CceE
Q 017914 257 ICQVLSASIDKPSA---WNVY 274 (364)
Q Consensus 257 va~~~~~~l~~~~~---g~~~ 274 (364)
+|++++.++..... |+.+
T Consensus 220 vA~~v~~l~s~~~~~itG~~i 240 (274)
T 3e03_A 220 MADAAHAVLTREAAGFHGQFL 240 (274)
T ss_dssp HHHHHHHHHTSCCTTCCSCEE
T ss_pred HHHHHHHHhCccccccCCeEE
Confidence 99999999976533 6666
|
| >3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.64 E-value=5.9e-15 Score=133.27 Aligned_cols=199 Identities=11% Similarity=0.046 Sum_probs=130.1
Q ss_pred CCCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhh-----------hhh--CCceEEEccCChhhH--Hhh-
Q 017914 56 WQSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKE-----------LEQ--SGFDVHLFNANETAL--MIL- 118 (364)
Q Consensus 56 ~~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-----------l~~--~~~~~~~~D~~~~~~--~~~- 118 (364)
...+++||||| +|.||++++++|+++|++|++++|+.++.+. +.. ..+.++.+|++|.+. ..+
T Consensus 42 ~l~gk~vlVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~ 121 (346)
T 3kvo_A 42 RLAGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCIVDVRDEQQISAAVE 121 (346)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHH
T ss_pred CCCCCEEEEeCCChHHHHHHHHHHHHCCCEEEEEECChhhhhhhHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHH
Confidence 34578999999 9999999999999999999999998764221 111 356788999999763 222
Q ss_pred ------ccCceeeEEEEecCCCCCCCCh----hhhHHHH------HHHH----hhcCCccEEEEEccceeecCCCCcccc
Q 017914 119 ------TTLKNYTHLLVSIPPLEGTGDP----MLKHGEL------LRST----LMNGHLQWLGYLSSTGVYGHSGGAWVD 178 (364)
Q Consensus 119 ------~~~d~v~~~~~~~~~~~~~~~~----~~~~~~~------l~~a----~~~~~~~r~v~~Ss~~vy~~~~~~~~~ 178 (364)
..+|+++|+++........... ......| +..+ +++.+..+||++||...+...
T Consensus 122 ~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~~~~~~~------ 195 (346)
T 3kvo_A 122 KAIKKFGGIDILVNNASAISLTNTLDTPTKRLDLMMNVNTRGTYLASKACIPYLKKSKVAHILNISPPLNLNPV------ 195 (346)
T ss_dssp HHHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTCSSCEEEEECCCCCCCGG------
T ss_pred HHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCCEEEEECCHHHcCCC------
Confidence 3789999999865432211111 1112222 2222 245566799999997644221
Q ss_pred CCCCCCCCChhHHHHHHHHHHHHHhhhhc--CCcEEEEEecceecCCCChHHHHHHhcCcccccccccCCcccccccHHH
Q 017914 179 EDYPANPTTELGRLRLSAEKGWLNLGRDL--GISAQVFRLGGIYGPGRSSVDTIIKQLPLSEGQKMRRARQYTSRIHVDD 256 (364)
Q Consensus 179 E~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D 256 (364)
+......|+.+|...+.+.+.++.+. +++++.|.||.++... .... ... . .....+..++|
T Consensus 196 ---~~~~~~~Y~aSKaal~~l~~~la~e~~~gIrvn~v~PG~~i~T~--~~~~-~~~-----~------~~~~r~~~ped 258 (346)
T 3kvo_A 196 ---WFKQHCAYTIAKYGMSMYVLGMAEEFKGEIAVNALWPKTAIHTA--AMDM-LGG-----P------GIESQCRKVDI 258 (346)
T ss_dssp ---GTSSSHHHHHHHHHHHHHHHHHHHHTTTTCEEEEEECSBCBCCH--HHHH-HCC-------------CGGGCBCTHH
T ss_pred ---CCCCchHHHHHHHHHHHHHHHHHHHhcCCcEEEEEeCCCccccH--HHHh-hcc-----c------cccccCCCHHH
Confidence 01234689999999999999887654 7999999999643321 1111 110 0 01123467899
Q ss_pred HHHHHHHHccCCC--CCceEEEeC
Q 017914 257 ICQVLSASIDKPS--AWNVYNVVD 278 (364)
Q Consensus 257 va~~~~~~l~~~~--~g~~~~i~~ 278 (364)
+|++++.++.... .|+.+ +.+
T Consensus 259 vA~~v~~L~s~~~~itG~~i-vdg 281 (346)
T 3kvo_A 259 IADAAYSIFQKPKSFTGNFV-IDE 281 (346)
T ss_dssp HHHHHHHHHTSCTTCCSCEE-EHH
T ss_pred HHHHHHHHHhcCCCCCceEE-ECC
Confidence 9999999998732 36655 443
|
| >4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=99.64 E-value=3.7e-15 Score=127.96 Aligned_cols=201 Identities=9% Similarity=-0.071 Sum_probs=133.2
Q ss_pred CCCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhh----hh--CCceEEEccCChhhH--H-------hhc
Q 017914 56 WQSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKEL----EQ--SGFDVHLFNANETAL--M-------ILT 119 (364)
Q Consensus 56 ~~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l----~~--~~~~~~~~D~~~~~~--~-------~~~ 119 (364)
+..+|++|||| ++.||+++++.|+++|++|++.+|+.+...+. .+ .++..+.+|++|++. . .+.
T Consensus 6 ~L~gKvalVTGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G 85 (255)
T 4g81_D 6 DLTGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGYDAHGVAFDVTDELAIEAAFSKLDAEGI 85 (255)
T ss_dssp CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHTTC
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHCC
Confidence 45689999998 89999999999999999999999987765433 22 356788899999764 1 124
Q ss_pred cCceeeEEEEecCCCCCCCChhhh----HHHHH----------HHHhh-cCCccEEEEEccceeecCCCCccccCCCCCC
Q 017914 120 TLKNYTHLLVSIPPLEGTGDPMLK----HGELL----------RSTLM-NGHLQWLGYLSSTGVYGHSGGAWVDEDYPAN 184 (364)
Q Consensus 120 ~~d~v~~~~~~~~~~~~~~~~~~~----~~~~l----------~~a~~-~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~ 184 (364)
.+|+++|.|+......-.+-...+ ...|+ +..+. +.+-.++|++||...+....
T Consensus 86 ~iDiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~~G~IVnisS~~~~~~~~----------- 154 (255)
T 4g81_D 86 HVDILINNAGIQYRKPMVELELENWQKVIDTNLTSAFLVSRSAAKRMIARNSGGKIINIGSLTSQAARP----------- 154 (255)
T ss_dssp CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSBCT-----------
T ss_pred CCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHccCCCEEEEEeehhhcCCCC-----------
Confidence 578888888754332211111111 11222 22222 33456899999875432211
Q ss_pred CCChhHHHHHHHHHHHHHhhhh---cCCcEEEEEecceecCCCC-------hHHHHHHhcCcccccccccCCcccccccH
Q 017914 185 PTTELGRLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRS-------SVDTIIKQLPLSEGQKMRRARQYTSRIHV 254 (364)
Q Consensus 185 ~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~i~v 254 (364)
....|+.+|.....+.+.++.+ +|+++..|.||.+..+... ....+....+++. +...
T Consensus 155 ~~~~Y~asKaal~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~Pl~R------------~g~p 222 (255)
T 4g81_D 155 TVAPYTAAKGGIKMLTCSMAAEWAQFNIQTNAIGPGYILTDMNTALIEDKQFDSWVKSSTPSQR------------WGRP 222 (255)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGHHHHTCHHHHHHHHHHSTTCS------------CBCG
T ss_pred CchhHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCCCchhhcccCCHHHHHHHHhCCCCCC------------CcCH
Confidence 2357999999999999888754 4899999999998765311 1111222222211 2457
Q ss_pred HHHHHHHHHHccCCC---CCceEEEeCC
Q 017914 255 DDICQVLSASIDKPS---AWNVYNVVDD 279 (364)
Q Consensus 255 ~Dva~~~~~~l~~~~---~g~~~~i~~~ 279 (364)
+|+|.+++.++.... .|+.+.+.+|
T Consensus 223 ediA~~v~fL~S~~a~~iTG~~i~VDGG 250 (255)
T 4g81_D 223 EELIGTAIFLSSKASDYINGQIIYVDGG 250 (255)
T ss_dssp GGGHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred HHHHHHHHHHhCchhCCCcCCEEEECCC
Confidence 999999998886542 4899998776
|
| >1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A* | Back alignment and structure |
|---|
Probab=99.63 E-value=2.5e-15 Score=130.69 Aligned_cols=206 Identities=11% Similarity=0.014 Sum_probs=127.5
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHh---CCCEEEEEEeCchhhhhhh--------hCCceEEEccCChhhH--Hhh----
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKN---QGWVVSGTCTNVMKKKELE--------QSGFDVHLFNANETAL--MIL---- 118 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~---~g~~V~~~~r~~~~~~~l~--------~~~~~~~~~D~~~~~~--~~~---- 118 (364)
..++++|||| +|+||++++++|++ +|++|++++|+.+....+. ...+.++.+|++|.+. ..+
T Consensus 4 l~~k~~lVTGas~gIG~~ia~~l~~~~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~ 83 (259)
T 1oaa_A 4 LGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAVR 83 (259)
T ss_dssp CBSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHHH
T ss_pred CCCcEEEEeCCCChHHHHHHHHHHHhhcCCCeEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEecCCCCHHHHHHHHHHHH
Confidence 3457899999 99999999999999 8999999999876554332 1347789999999763 221
Q ss_pred c-----cCc--eeeEEEEecCCC-CCC------CChhhhHHHHH------HHHh----hcC--CccEEEEEccceeecCC
Q 017914 119 T-----TLK--NYTHLLVSIPPL-EGT------GDPMLKHGELL------RSTL----MNG--HLQWLGYLSSTGVYGHS 172 (364)
Q Consensus 119 ~-----~~d--~v~~~~~~~~~~-~~~------~~~~~~~~~~l------~~a~----~~~--~~~r~v~~Ss~~vy~~~ 172 (364)
+ .+| +++|+++..... ... .+.......|+ ..++ ++. +..++|++||...+..
T Consensus 84 ~~~~~g~~d~~~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~g~iv~isS~~~~~~- 162 (259)
T 1oaa_A 84 ELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQP- 162 (259)
T ss_dssp HSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGTSC-
T ss_pred hccccccCCccEEEECCcccCCCCcchhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCceEEEEcCchhcCC-
Confidence 2 457 888988764321 111 11111222232 2222 233 4568999999765422
Q ss_pred CCccccCCCCCCCCChhHHHHHHHHHHHHHhhhhc-CCcEEEEEecceecCCCChHHHHHHhcCccc-ccccccCCcccc
Q 017914 173 GGAWVDEDYPANPTTELGRLRLSAEKGWLNLGRDL-GISAQVFRLGGIYGPGRSSVDTIIKQLPLSE-GQKMRRARQYTS 250 (364)
Q Consensus 173 ~~~~~~E~~~~~~~~~Y~~sK~~~E~~~~~~~~~~-~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 250 (364)
..+...|+.+|...+.+.+.++.+. +++++.+.||.+-.+. ...+.....-.. ...+........
T Consensus 163 ----------~~~~~~Y~asKaa~~~~~~~la~e~~~i~vn~v~PG~v~T~~---~~~~~~~~~~~~~~~~~~~~~p~~~ 229 (259)
T 1oaa_A 163 ----------YKGWGLYCAGKAARDMLYQVLAAEEPSVRVLSYAPGPLDNDM---QQLARETSKDPELRSKLQKLKSDGA 229 (259)
T ss_dssp ----------CTTCHHHHHHHHHHHHHHHHHHHHCTTEEEEEEECCSBSSHH---HHHHHHHCSCHHHHHHHHHHHHTTC
T ss_pred ----------CCCccHHHHHHHHHHHHHHHHHhhCCCceEEEecCCCcCcch---HHHHhhccCChhHHHHHHHhhhcCC
Confidence 1234689999999999999987665 4889999998875431 111111000000 000000000123
Q ss_pred cccHHHHHHHHHHHccCC--CCCceEEE
Q 017914 251 RIHVDDICQVLSASIDKP--SAWNVYNV 276 (364)
Q Consensus 251 ~i~v~Dva~~~~~~l~~~--~~g~~~~i 276 (364)
+.+++|+|++++.++... -.|+.+++
T Consensus 230 ~~~p~dvA~~v~~l~~~~~~itG~~i~v 257 (259)
T 1oaa_A 230 LVDCGTSAQKLLGLLQKDTFQSGAHVDF 257 (259)
T ss_dssp SBCHHHHHHHHHHHHHHCCSCTTEEEET
T ss_pred cCCHHHHHHHHHHHHhhccccCCcEEec
Confidence 578999999999888743 23666554
|
| >4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A* | Back alignment and structure |
|---|
Probab=99.63 E-value=1.9e-14 Score=124.04 Aligned_cols=200 Identities=11% Similarity=0.016 Sum_probs=133.3
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhh-----hCCceEEEccCChhhH---------HhhccC
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELE-----QSGFDVHLFNANETAL---------MILTTL 121 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~-----~~~~~~~~~D~~~~~~---------~~~~~~ 121 (364)
..+|++|||| ++.||+++++.|+++|.+|++.+|+.+....+. ..++.++.+|++|++. +.+..+
T Consensus 5 L~gKvalVTGas~GIG~aia~~la~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~G~i 84 (258)
T 4gkb_A 5 LQDKVVIVTGGASGIGGAISMRLAEERAIPVVFARHAPDGAFLDALAQRQPRATYLPVELQDDAQCRDAVAQTIATFGRL 84 (258)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCCHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCcccHHHHHHHHhcCCCEEEEEeecCCHHHHHHHHHHHHHHhCCC
Confidence 5678999998 899999999999999999999999876543322 2467899999999653 223468
Q ss_pred ceeeEEEEecCCCCCCCChhhhH----HHHH----------HHHhhcCCccEEEEEccceeecCCCCccccCCCCCCCCC
Q 017914 122 KNYTHLLVSIPPLEGTGDPMLKH----GELL----------RSTLMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANPTT 187 (364)
Q Consensus 122 d~v~~~~~~~~~~~~~~~~~~~~----~~~l----------~~a~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~ 187 (364)
|++++.++..... ..+....++ ..|+ +..+++.+ .++|++||...+.... ...
T Consensus 85 DiLVNnAGi~~~~-~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~-G~IVnisS~~~~~~~~-----------~~~ 151 (258)
T 4gkb_A 85 DGLVNNAGVNDGI-GLDAGRDAFVASLERNLIHYYAMAHYCVPHLKATR-GAIVNISSKTAVTGQG-----------NTS 151 (258)
T ss_dssp CEEEECCCCCCCC-CTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCTHHHHCCS-----------SCH
T ss_pred CEEEECCCCCCCC-CccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CeEEEEeehhhccCCC-----------Cch
Confidence 9999888753322 121111111 1222 22223333 5899999976442221 235
Q ss_pred hhHHHHHHHHHHHHHhhhh---cCCcEEEEEecceecCCCC-h----------HHHHHHhcCcccccccccCCccccccc
Q 017914 188 ELGRLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRS-S----------VDTIIKQLPLSEGQKMRRARQYTSRIH 253 (364)
Q Consensus 188 ~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~-~----------~~~~~~~~~~~~~~~~~~~~~~~~~i~ 253 (364)
.|+.+|...+.+.+.++.+ +|+++..|.||.+..+... . ...+....++ + .-+..
T Consensus 152 ~Y~asKaav~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~pl--g---------~R~g~ 220 (258)
T 4gkb_A 152 GYCASKGAQLALTREWAVALREHGVRVNAVIPAEVMTPLYRNWIATFEDPEAKLAEIAAKVPL--G---------RRFTT 220 (258)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCSCC-----------CHHHHHHTTCTT--T---------TSCBC
T ss_pred HHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCCChhHhhhhhcccChHHHHHHHHhcCCC--C---------CCCcC
Confidence 7999999999999888754 5899999999998765321 1 1111111111 0 12356
Q ss_pred HHHHHHHHHHHccCCC---CCceEEEeCCC
Q 017914 254 VDDICQVLSASIDKPS---AWNVYNVVDDD 280 (364)
Q Consensus 254 v~Dva~~~~~~l~~~~---~g~~~~i~~~~ 280 (364)
.+|+|++++.++.... .|+++.+.+|-
T Consensus 221 peeiA~~v~fLaS~~a~~iTG~~i~VDGG~ 250 (258)
T 4gkb_A 221 PDEIADTAVFLLSPRASHTTGEWLFVDGGY 250 (258)
T ss_dssp HHHHHHHHHHHHSGGGTTCCSCEEEESTTT
T ss_pred HHHHHHHHHHHhCchhcCccCCeEEECCCc
Confidence 8999999999887543 48999998774
|
| >2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ... | Back alignment and structure |
|---|
Probab=99.62 E-value=5.5e-15 Score=129.22 Aligned_cols=204 Identities=9% Similarity=0.021 Sum_probs=129.6
Q ss_pred CCCCeEEEEc---CChhhHHHHHHHHhCCCEEEEEEeCchhh-hhhhh---CCceEEEccCChhhH--Hhh-------c-
Q 017914 57 QSPNRMLILG---MGFVGRIFAEKIKNQGWVVSGTCTNVMKK-KELEQ---SGFDVHLFNANETAL--MIL-------T- 119 (364)
Q Consensus 57 ~~~~~vlVtG---tG~iG~~l~~~L~~~g~~V~~~~r~~~~~-~~l~~---~~~~~~~~D~~~~~~--~~~-------~- 119 (364)
..+++||||| +|+||++++++|+++|++|++++|+.++. +.+.+ .++.++.+|++|.+. ..+ .
T Consensus 5 l~~k~vlVTGa~~s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 84 (269)
T 2h7i_A 5 LDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRLPAKAPLLELDVQNEEHLASLAGRVTEAIGA 84 (269)
T ss_dssp TTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHTTSSSCCCEEECCTTCHHHHHHHHHHHHHHHCT
T ss_pred cCCCEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecChHHHHHHHHHhcCCCceEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 4468899997 69999999999999999999999987542 33321 357889999999763 222 2
Q ss_pred --cCceeeEEEEecCC----CCCCC-----ChhhhHHHH------HHHHhhcC--CccEEEEEccceeecCCCCccccCC
Q 017914 120 --TLKNYTHLLVSIPP----LEGTG-----DPMLKHGEL------LRSTLMNG--HLQWLGYLSSTGVYGHSGGAWVDED 180 (364)
Q Consensus 120 --~~d~v~~~~~~~~~----~~~~~-----~~~~~~~~~------l~~a~~~~--~~~r~v~~Ss~~vy~~~~~~~~~E~ 180 (364)
.+|+++|+++.... ..... +.......| +..++... ...++|++||...++.
T Consensus 85 ~~~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~iss~~~~~~--------- 155 (269)
T 2h7i_A 85 GNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNPGGSIVGMDFDPSRAM--------- 155 (269)
T ss_dssp TCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECCCSSCC---------
T ss_pred CCCceEEEECCccCccccccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCeEEEEcCcccccc---------
Confidence 78999999876431 11111 111112223 23333211 1258999998653211
Q ss_pred CCCCCCChhHHHHHHHHHHHHHhhhh---cCCcEEEEEecceecCCCChHHHHHHh--------------cCcccccccc
Q 017914 181 YPANPTTELGRLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRSSVDTIIKQ--------------LPLSEGQKMR 243 (364)
Q Consensus 181 ~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~--------------~~~~~~~~~~ 243 (364)
.....|+.+|...+.+.+.++.+ .|+++++|+||.+..+. ...+... ..+....+.+
T Consensus 156 ---~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 229 (269)
T 2h7i_A 156 ---PAYNWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLA---MSAIVGGALGEEAGAQIQLLEEGWDQRAPIG 229 (269)
T ss_dssp ---TTTHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCHH---HHHHHTTTTCHHHHHHHHHHHHHHHHHCTTC
T ss_pred ---CchHHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccchh---hhccccccchhhHHHHHHHHHHhhhccCCcc
Confidence 13467999999999999888755 48999999999886531 1111000 0000000000
Q ss_pred cCCcccccccHHHHHHHHHHHccCCC---CCceEEEeCCC
Q 017914 244 RARQYTSRIHVDDICQVLSASIDKPS---AWNVYNVVDDD 280 (364)
Q Consensus 244 ~~~~~~~~i~v~Dva~~~~~~l~~~~---~g~~~~i~~~~ 280 (364)
+.+...+|+|++++.++.... .|+.+.+.+|.
T Consensus 230 -----rr~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG~ 264 (269)
T 2h7i_A 230 -----WNMKDATPVAKTVCALLSDWLPATTGDIIYADGGA 264 (269)
T ss_dssp -----CCTTCCHHHHHHHHHHHSSSCTTCCSEEEEESTTG
T ss_pred -----cCCCCHHHHHHHHHHHhCchhccCcceEEEecCCe
Confidence 124678999999999997543 38888887763
|
| >4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=99.62 E-value=3.2e-14 Score=123.29 Aligned_cols=201 Identities=11% Similarity=-0.051 Sum_probs=131.6
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhh---CCceEEEccCChhhH--H-------hhccCce
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQ---SGFDVHLFNANETAL--M-------ILTTLKN 123 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~---~~~~~~~~D~~~~~~--~-------~~~~~d~ 123 (364)
..+|.+|||| ++.||+.+++.|+++|++|++.+|+.+..+...+ .++..+.+|++|.+. . .+..+|+
T Consensus 27 L~gKvalVTGas~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDi 106 (273)
T 4fgs_A 27 LNAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEIGGGAVGIQADSANLAELDRLYEKVKAEAGRIDV 106 (273)
T ss_dssp TTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCEEE
T ss_pred hCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCCeEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence 4678999999 8999999999999999999999999876554322 457889999999663 1 2245788
Q ss_pred eeEEEEecCCCCCCCChhh----hHHHHHHHHhh--------cCCccEEEEEccceeecCCCCccccCCCCCCCCChhHH
Q 017914 124 YTHLLVSIPPLEGTGDPML----KHGELLRSTLM--------NGHLQWLGYLSSTGVYGHSGGAWVDEDYPANPTTELGR 191 (364)
Q Consensus 124 v~~~~~~~~~~~~~~~~~~----~~~~~l~~a~~--------~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~~ 191 (364)
+++.++......-.+-... ....|+..... ...-.++|++||...+... .....|+.
T Consensus 107 LVNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~G~IInisS~~~~~~~-----------~~~~~Y~a 175 (273)
T 4fgs_A 107 LFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLARGSSVVLTGSTAGSTGT-----------PAFSVYAA 175 (273)
T ss_dssp EEECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGGGGSCC-----------TTCHHHHH
T ss_pred EEECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCeEEEEeehhhccCC-----------CCchHHHH
Confidence 8888765433221111111 22233333221 1112479999886543211 12357999
Q ss_pred HHHHHHHHHHHhhhh---cCCcEEEEEecceecCCC------Ch------HHHHHHhcCcccccccccCCcccccccHHH
Q 017914 192 LRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGR------SS------VDTIIKQLPLSEGQKMRRARQYTSRIHVDD 256 (364)
Q Consensus 192 sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~------~~------~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D 256 (364)
+|.....+.+.++.+ .|+++..|.||.+..+.- .. ...+....+++. +-..+|
T Consensus 176 sKaav~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~PlgR------------~g~pee 243 (273)
T 4fgs_A 176 SKAALRSFARNWILDLKDRGIRINTLSPGPTETTGLVELAGKDPVQQQGLLNALAAQVPMGR------------VGRAEE 243 (273)
T ss_dssp HHHHHHHHHHHHHHHTTTSCEEEEEEEECSBCC---------CHHHHHHHHHHHHHHSTTSS------------CBCHHH
T ss_pred HHHHHHHHHHHHHHHhcccCeEEEEEeeCCCCChhHHHhhccCchhhHHHHHHHHhcCCCCC------------CcCHHH
Confidence 999999999888754 479999999998866531 11 111222222211 245899
Q ss_pred HHHHHHHHccCCC---CCceEEEeCCC
Q 017914 257 ICQVLSASIDKPS---AWNVYNVVDDD 280 (364)
Q Consensus 257 va~~~~~~l~~~~---~g~~~~i~~~~ 280 (364)
+|.+++.++.... .|+.+.+.+|.
T Consensus 244 iA~~v~FLaSd~a~~iTG~~i~VDGG~ 270 (273)
T 4fgs_A 244 VAAAALFLASDDSSFVTGAELFVDGGS 270 (273)
T ss_dssp HHHHHHHHHSGGGTTCCSCEEEESTTT
T ss_pred HHHHHHHHhCchhcCccCCeEeECcCh
Confidence 9999999987543 38999987764
|
| >3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.60 E-value=1.2e-14 Score=129.68 Aligned_cols=200 Identities=10% Similarity=-0.021 Sum_probs=127.6
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhh----hh---CCceEEEccCChh-hH--Hh-------h
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKEL----EQ---SGFDVHLFNANET-AL--MI-------L 118 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l----~~---~~~~~~~~D~~~~-~~--~~-------~ 118 (364)
..+++||||| +|+||++++++|+++|++|++++|+.++.... .. .++.++.+|++|. +. .. +
T Consensus 10 ~~~k~vlITGas~GIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~v~~~~~~~~~~~ 89 (311)
T 3o26_A 10 TKRRCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSNHENVVFHQLDVTDPIATMSSLADFIKTHF 89 (311)
T ss_dssp --CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCSEEEEECCTTSCHHHHHHHHHHHHHHH
T ss_pred CCCcEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEccCCCcHHHHHHHHHHHHHhC
Confidence 4568999999 99999999999999999999999987664332 11 3678999999997 53 11 2
Q ss_pred ccCceeeEEEEecCCCC----------------------------------CCCChhhhHHHH----------HHHHhhc
Q 017914 119 TTLKNYTHLLVSIPPLE----------------------------------GTGDPMLKHGEL----------LRSTLMN 154 (364)
Q Consensus 119 ~~~d~v~~~~~~~~~~~----------------------------------~~~~~~~~~~~~----------l~~a~~~ 154 (364)
..+|+++|+|+...... ...+.......| ++..+++
T Consensus 90 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~ 169 (311)
T 3o26_A 90 GKLDILVNNAGVAGFSVDADRFKAMISDIGEDSEELVKIYEKPEAQELMSETYELAEECLKINYNGVKSVTEVLIPLLQL 169 (311)
T ss_dssp SSCCEEEECCCCCSCEECHHHHHHHHHHHCSSTTHHHHHTTSHHHHTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTT
T ss_pred CCCCEEEECCcccccccccchhhhcccccccchhhcchhhcccchhcccccchhhhhhheeeeeehHHHHHHHhhHhhcc
Confidence 37899999998653210 000001112222 2222334
Q ss_pred CCccEEEEEccceeecCC-CCc-------------------------------cccCCCCCCCCChhHHHHHHHHHHHHH
Q 017914 155 GHLQWLGYLSSTGVYGHS-GGA-------------------------------WVDEDYPANPTTELGRLRLSAEKGWLN 202 (364)
Q Consensus 155 ~~~~r~v~~Ss~~vy~~~-~~~-------------------------------~~~E~~~~~~~~~Y~~sK~~~E~~~~~ 202 (364)
.+..++|++||...+... ... ...+.....+...|+.+|.+.+.+.+.
T Consensus 170 ~~~~~IV~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~ 249 (311)
T 3o26_A 170 SDSPRIVNVSSSTGSLKYVSNETALEILGDGDALTEERIDMVVNMLLKDFKENLIETNGWPSFGAAYTTSKACLNAYTRV 249 (311)
T ss_dssp SSSCEEEEECCGGGSGGGCCCHHHHHHHHCGGGCCHHHHHHHHHHHHHHHHTTCTTTTTCCSSCHHHHHHHHHHHHHHHH
T ss_pred CCCCeEEEEecCCcccccccchhhhhhhccccccchhHHHHHHHHHHhhhhccccccccCcccchhhHHHHHHHHHHHHH
Confidence 556799999987543211 000 000111112346899999999999999
Q ss_pred hhhhc-CCcEEEEEecceecCCCChHHHHHHhcCcccccccccCCcccccccHHHHHHHHHHHccCCCC--CceEEEeC
Q 017914 203 LGRDL-GISAQVFRLGGIYGPGRSSVDTIIKQLPLSEGQKMRRARQYTSRIHVDDICQVLSASIDKPSA--WNVYNVVD 278 (364)
Q Consensus 203 ~~~~~-~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~~--g~~~~i~~ 278 (364)
++.+. +++++.+.||.+..+.... ......++.|+.++.++..+.. +..|..++
T Consensus 250 la~e~~~i~v~~v~PG~v~T~~~~~----------------------~~~~~~~~~a~~~~~~~~~~~~~~~g~~~~~s 306 (311)
T 3o26_A 250 LANKIPKFQVNCVCPGLVKTEMNYG----------------------IGNYTAEEGAEHVVRIALFPDDGPSGFFYDCS 306 (311)
T ss_dssp HHHHCTTSEEEEECCCSBCSGGGTT----------------------CCSBCHHHHHHHHHHHHTCCSSCCCSCEETC-
T ss_pred HHhhcCCceEEEecCCceecCCcCC----------------------CCCCCHHHHHHHHHHHHhCCCCCCCceEeccc
Confidence 98765 6999999999886542100 0115689999999988876532 33444443
|
| >3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A | Back alignment and structure |
|---|
Probab=99.58 E-value=4e-14 Score=132.30 Aligned_cols=206 Identities=13% Similarity=0.018 Sum_probs=131.1
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhh--hh-hhhCCceEEEccCChhhH--Hhh-------c-cCc
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKK--KE-LEQSGFDVHLFNANETAL--MIL-------T-TLK 122 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~--~~-l~~~~~~~~~~D~~~~~~--~~~-------~-~~d 122 (364)
..++++|||| +|.||.++++.|.++|++|++++|+.... .. ....++.++.+|++|.+. ..+ . .+|
T Consensus 211 l~gk~~LVTGgsgGIG~aiA~~La~~Ga~Vvl~~r~~~~~~l~~~~~~~~~~~~~~Dvtd~~~v~~~~~~~~~~~g~~id 290 (454)
T 3u0b_A 211 LDGKVAVVTGAARGIGATIAEVFARDGATVVAIDVDGAAEDLKRVADKVGGTALTLDVTADDAVDKITAHVTEHHGGKVD 290 (454)
T ss_dssp TTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHHTCEEEECCTTSTTHHHHHHHHHHHHSTTCCS
T ss_pred CCCCEEEEeCCchHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHHcCCeEEEEecCCHHHHHHHHHHHHHHcCCCce
Confidence 3568999998 99999999999999999999999864321 11 223467899999999664 222 2 389
Q ss_pred eeeEEEEecCCCCCCCChh----hhH------HHHHHHHhhc----CCccEEEEEccceeecCCCCccccCCCCCCCCCh
Q 017914 123 NYTHLLVSIPPLEGTGDPM----LKH------GELLRSTLMN----GHLQWLGYLSSTGVYGHSGGAWVDEDYPANPTTE 188 (364)
Q Consensus 123 ~v~~~~~~~~~~~~~~~~~----~~~------~~~l~~a~~~----~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~ 188 (364)
+|+|+++............ ... ..++.+++.. .+..+||++||...+.... ....
T Consensus 291 ~lV~nAGv~~~~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~g~iV~iSS~a~~~g~~-----------g~~~ 359 (454)
T 3u0b_A 291 ILVNNAGITRDKLLANMDEKRWDAVIAVNLLAPQRLTEGLVGNGTIGEGGRVIGLSSMAGIAGNR-----------GQTN 359 (454)
T ss_dssp EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHTTSSCTTCEEEEECCHHHHHCCT-----------TCHH
T ss_pred EEEECCcccCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEEeChHhCCCCC-----------CCHH
Confidence 9999998654322111111 111 1233443332 2567999999976442221 3368
Q ss_pred hHHHHHHHHHHHHHhhhh---cCCcEEEEEecceecCCCChHHHHHHhcCcccccccccCCcccccccHHHHHHHHHHHc
Q 017914 189 LGRLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRSSVDTIIKQLPLSEGQKMRRARQYTSRIHVDDICQVLSASI 265 (364)
Q Consensus 189 Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l 265 (364)
|+.+|...+.+.+.++.+ .|+++++|.||.+..+....+...... .. ........+...+|+|++++.++
T Consensus 360 YaasKaal~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~----~~---~~~~~l~r~g~pedvA~~v~fL~ 432 (454)
T 3u0b_A 360 YATTKAGMIGLAEALAPVLADKGITINAVAPGFIETKMTEAIPLATRE----VG---RRLNSLFQGGQPVDVAELIAYFA 432 (454)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECSBCC----------CH----HH---HHSBTTSSCBCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhhhcCcEEEEEEcCcccChhhhhcchhhHH----HH---HhhccccCCCCHHHHHHHHHHHh
Confidence 999999998888887643 489999999999876542211100000 00 00001122357899999999988
Q ss_pred cCC---CCCceEEEeCCC
Q 017914 266 DKP---SAWNVYNVVDDD 280 (364)
Q Consensus 266 ~~~---~~g~~~~i~~~~ 280 (364)
... -.|+++++.++.
T Consensus 433 s~~a~~itG~~i~vdGG~ 450 (454)
T 3u0b_A 433 SPASNAVTGNTIRVCGQA 450 (454)
T ss_dssp CGGGTTCCSCEEEESSSB
T ss_pred CCccCCCCCcEEEECCcc
Confidence 754 348999998764
|
| >4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=99.57 E-value=6.6e-14 Score=119.03 Aligned_cols=201 Identities=12% Similarity=0.039 Sum_probs=131.1
Q ss_pred CCCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchh--hhhhhh--CCceEEEccCChhhH--Hh--hccCceeeE
Q 017914 56 WQSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMK--KKELEQ--SGFDVHLFNANETAL--MI--LTTLKNYTH 126 (364)
Q Consensus 56 ~~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~--~~~l~~--~~~~~~~~D~~~~~~--~~--~~~~d~v~~ 126 (364)
+..+|++|||| ++.||+.+++.|.++|++|++.+|+..+ .+.+.. .++..+.+|++|++. .. ...+|++++
T Consensus 6 ~L~GKvalVTGas~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~g~iDiLVN 85 (247)
T 4hp8_A 6 SLEGRKALVTGANTGLGQAIAVGLAAAGAEVVCAARRAPDETLDIIAKDGGNASALLIDFADPLAAKDSFTDAGFDILVN 85 (247)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTTSTTTTTTSSTTTCCCEEEE
T ss_pred CCCCCEEEEeCcCCHHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHHhCCcEEEEEccCCCHHHHHHHHHhCCCCEEEE
Confidence 45689999998 8999999999999999999999997532 222322 356788999999764 22 245788888
Q ss_pred EEEecCCCCCCCChhhhH----HHHHH----------HHhhcC-CccEEEEEccceeecCCCCccccCCCCCCCCChhHH
Q 017914 127 LLVSIPPLEGTGDPMLKH----GELLR----------STLMNG-HLQWLGYLSSTGVYGHSGGAWVDEDYPANPTTELGR 191 (364)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~----~~~l~----------~a~~~~-~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~~ 191 (364)
.++........+-...++ ..|+. ..+.+. +-.++|++||...+... .....|+.
T Consensus 86 NAGi~~~~~~~~~~~~~w~~~~~vNl~g~f~~~~~~~~~m~~~g~~G~IVnisS~~~~~g~-----------~~~~~Y~a 154 (247)
T 4hp8_A 86 NAGIIRRADSVEFSELDWDEVMDVNLKALFFTTQAFAKELLAKGRSGKVVNIASLLSFQGG-----------IRVPSYTA 154 (247)
T ss_dssp CCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCC-----------SSCHHHHH
T ss_pred CCCCCCCCCcccccHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCCcEEEEEechhhCCCC-----------CCChHHHH
Confidence 887644322111111111 12222 222222 34689999986533211 12357999
Q ss_pred HHHHHHHHHHHhhhh---cCCcEEEEEecceecCCCCh-------HHHHHHhcCcccccccccCCcccccccHHHHHHHH
Q 017914 192 LRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRSS-------VDTIIKQLPLSEGQKMRRARQYTSRIHVDDICQVL 261 (364)
Q Consensus 192 sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~ 261 (364)
+|.....+.+.++.+ +|+++..|-||.+-.+.... ...+....+++ -+-..+|+|.++
T Consensus 155 sKaav~~ltr~lA~Ela~~gIrVNaV~PG~i~T~~~~~~~~~~~~~~~~~~~~Plg------------R~g~peeiA~~v 222 (247)
T 4hp8_A 155 AKHGVAGLTKLLANEWAAKGINVNAIAPGYIETNNTEALRADAARNKAILERIPAG------------RWGHSEDIAGAA 222 (247)
T ss_dssp HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTSHHHHHHHHTTCTTS------------SCBCTHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCcchhhcccCHHHHHHHHhCCCCC------------CCcCHHHHHHHH
Confidence 999999999888654 48999999999986543211 11111111111 124579999999
Q ss_pred HHHccCCC---CCceEEEeCC
Q 017914 262 SASIDKPS---AWNVYNVVDD 279 (364)
Q Consensus 262 ~~~l~~~~---~g~~~~i~~~ 279 (364)
+.++.... .|+++.+.+|
T Consensus 223 ~fLaSd~a~~iTG~~i~VDGG 243 (247)
T 4hp8_A 223 VFLSSAAADYVHGAILNVDGG 243 (247)
T ss_dssp HHHTSGGGTTCCSCEEEESTT
T ss_pred HHHhCchhcCCcCCeEEECcc
Confidence 99887543 3899988776
|
| >1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A* | Back alignment and structure |
|---|
Probab=99.57 E-value=7.8e-16 Score=138.31 Aligned_cols=160 Identities=14% Similarity=0.078 Sum_probs=111.3
Q ss_pred CCeEEEEc-CChhhHHHHHHHHhCCC-------EEEEEEeCch--hh----hhhhhCCceEEEccCChhh-H-HhhccCc
Q 017914 59 PNRMLILG-MGFVGRIFAEKIKNQGW-------VVSGTCTNVM--KK----KELEQSGFDVHLFNANETA-L-MILTTLK 122 (364)
Q Consensus 59 ~~~vlVtG-tG~iG~~l~~~L~~~g~-------~V~~~~r~~~--~~----~~l~~~~~~~~~~D~~~~~-~-~~~~~~d 122 (364)
+|+|+||| +||||++++..|+++|+ +|+++++... +. ..+....+.++ +|+.+.+ + .+++++|
T Consensus 4 ~mkVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D~~~~~~~~~g~~~dl~~~~~~~~-~di~~~~~~~~a~~~~D 82 (327)
T 1y7t_A 4 PVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCAFPLL-AGLEATDDPKVAFKDAD 82 (327)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTE-EEEEEESCHHHHTTTCS
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEeCCCchhhccchhhhhhccccccc-CCeEeccChHHHhCCCC
Confidence 47999999 89999999999999986 8999998641 11 12222223333 6776633 3 6788999
Q ss_pred eeeEEEEecCCCCCCCCh------hhhHHHHHHHHhhcCC-cc-EEEEEccceeecCCCCcccc-CCC-CCCCCChhHHH
Q 017914 123 NYTHLLVSIPPLEGTGDP------MLKHGELLRSTLMNGH-LQ-WLGYLSSTGVYGHSGGAWVD-EDY-PANPTTELGRL 192 (364)
Q Consensus 123 ~v~~~~~~~~~~~~~~~~------~~~~~~~l~~a~~~~~-~~-r~v~~Ss~~vy~~~~~~~~~-E~~-~~~~~~~Y~~s 192 (364)
+|+|+|+...... .++ +.....++++++++.+ .+ +++++|+..- ...++. |.. ...|.+.|+.+
T Consensus 83 ~Vih~Ag~~~~~~--~~~~~~~~~Nv~~t~~l~~a~~~~~~~~~~vvv~snp~~----~~~~~~~~~~~~~~p~~~yg~t 156 (327)
T 1y7t_A 83 YALLVGAAPRKAG--MERRDLLQVNGKIFTEQGRALAEVAKKDVKVLVVGNPAN----TNALIAYKNAPGLNPRNFTAMT 156 (327)
T ss_dssp EEEECCCCCCCTT--CCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHH----HHHHHHHHTCTTSCGGGEEECC
T ss_pred EEEECCCcCCCCC--CCHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeCCchh----hhHHHHHHHcCCCChhheeccc
Confidence 9999998654321 222 2234467777877664 54 6777765420 001222 223 35567789999
Q ss_pred HHHHHHHHHHhhhhcCCcEEEEEecceecCCCC
Q 017914 193 RLSAEKGWLNLGRDLGISAQVFRLGGIYGPGRS 225 (364)
Q Consensus 193 K~~~E~~~~~~~~~~~~~~~ilRp~~v~g~~~~ 225 (364)
|+..|++...+++..|++.+++|+.++||+++.
T Consensus 157 kl~~er~~~~~a~~~g~~~~~vr~~~V~G~h~~ 189 (327)
T 1y7t_A 157 RLDHNRAKAQLAKKTGTGVDRIRRMTVWGNHSS 189 (327)
T ss_dssp HHHHHHHHHHHHHHHTCCGGGEECCEEEBCSST
T ss_pred hHHHHHHHHHHHHHhCcChhheeeeEEEcCCCC
Confidence 999999999998888999999999999998753
|
| >4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A* | Back alignment and structure |
|---|
Probab=99.57 E-value=6.6e-14 Score=121.05 Aligned_cols=211 Identities=11% Similarity=-0.021 Sum_probs=129.9
Q ss_pred CCCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCChhhH---------HhhccCceee
Q 017914 56 WQSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETAL---------MILTTLKNYT 125 (364)
Q Consensus 56 ~~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~---------~~~~~~d~v~ 125 (364)
...+|++|||| ++.||+++++.|+++|++|++.+|+..+. + .....+.+|+++.+. +.+..+|+++
T Consensus 8 ~L~GK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~--~--~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDilV 83 (261)
T 4h15_A 8 NLRGKRALITAGTKGAGAATVSLFLELGAQVLTTARARPEG--L--PEELFVEADLTTKEGCAIVAEATRQRLGGVDVIV 83 (261)
T ss_dssp CCTTCEEEESCCSSHHHHHHHHHHHHTTCEEEEEESSCCTT--S--CTTTEEECCTTSHHHHHHHHHHHHHHTSSCSEEE
T ss_pred CCCCCEEEEeccCcHHHHHHHHHHHHcCCEEEEEECCchhC--C--CcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 35678999999 89999999999999999999999975432 1 334578899999763 1224578888
Q ss_pred EEEEecCCCC-CCCC-----hhhhHHHHH----------HHHhhcCCccEEEEEccceeecCCCCccccCCCCCCCCChh
Q 017914 126 HLLVSIPPLE-GTGD-----PMLKHGELL----------RSTLMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANPTTEL 189 (364)
Q Consensus 126 ~~~~~~~~~~-~~~~-----~~~~~~~~l----------~~a~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y 189 (364)
|+++...... .+.+ .......|+ +..+++.+-.++|++||...+-... .....|
T Consensus 84 nnAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Iv~isS~~~~~~~~----------~~~~~Y 153 (261)
T 4h15_A 84 HMLGGSSAAGGGFSALSDDDWYNELSLNLFAAVRLDRQLVPDMVARGSGVVVHVTSIQRVLPLP----------ESTTAY 153 (261)
T ss_dssp ECCCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCT----------TTCHHH
T ss_pred ECCCCCccCCCCcccCCHHHHHHHHHHHhHHHHHHHHhhchhhhhcCCceEEEEEehhhccCCC----------CccHHH
Confidence 8876533221 1111 111122232 2223345567899999865321110 123579
Q ss_pred HHHHHHHHHHHHHhhhh---cCCcEEEEEecceecCCCC-hHHHHHHhcCccc--cc----ccccCCcccccccHHHHHH
Q 017914 190 GRLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRS-SVDTIIKQLPLSE--GQ----KMRRARQYTSRIHVDDICQ 259 (364)
Q Consensus 190 ~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~-~~~~~~~~~~~~~--~~----~~~~~~~~~~~i~v~Dva~ 259 (364)
+.+|...+.+.+.++.+ .|++++.|.||.+-.+... ............. .. .........-+...+|+|+
T Consensus 154 ~asKaal~~lt~~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~g~peevA~ 233 (261)
T 4h15_A 154 AAAKAALSTYSKAMSKEVSPKGVRVVRVSPGWIETEASVRLAERLAKQAGTDLEGGKKIIMDGLGGIPLGRPAKPEEVAN 233 (261)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHHHHHHHHTTCCHHHHHHHHHHHTTCCTTSSCBCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhhhCeEEEEEeCCCcCCcchhhhhHHHHHhhccchhhHHHHHHHHhcCCCCCCCcCHHHHHH
Confidence 99999999998888754 5899999999988654211 1111111000000 00 0000000112356899999
Q ss_pred HHHHHccCCC---CCceEEEeCCC
Q 017914 260 VLSASIDKPS---AWNVYNVVDDD 280 (364)
Q Consensus 260 ~~~~~l~~~~---~g~~~~i~~~~ 280 (364)
+++.++.... .|+.+.+.+|-
T Consensus 234 ~v~fLaS~~a~~itG~~i~VDGG~ 257 (261)
T 4h15_A 234 LIAFLASDRAASITGAEYTIDGGT 257 (261)
T ss_dssp HHHHHHSGGGTTCCSCEEEESTTC
T ss_pred HHHHHhCchhcCccCcEEEECCcC
Confidence 9999886542 48999988774
|
| >2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A* | Back alignment and structure |
|---|
Probab=99.57 E-value=3.1e-14 Score=134.31 Aligned_cols=207 Identities=14% Similarity=0.127 Sum_probs=136.0
Q ss_pred CCCCCeEEEEc-CChhhHHHHHHHHhCCCE-EEEEEeCchhh-------hhhhh--CCceEEEccCChhhH--Hhhcc--
Q 017914 56 WQSPNRMLILG-MGFVGRIFAEKIKNQGWV-VSGTCTNVMKK-------KELEQ--SGFDVHLFNANETAL--MILTT-- 120 (364)
Q Consensus 56 ~~~~~~vlVtG-tG~iG~~l~~~L~~~g~~-V~~~~r~~~~~-------~~l~~--~~~~~~~~D~~~~~~--~~~~~-- 120 (364)
...+++||||| +|+||.+++++|.++|++ |++++|+.... ..+.. .++.++.+|++|.+. ..++.
T Consensus 223 ~~~~~~vLITGgtGgIG~~la~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~i~ 302 (486)
T 2fr1_A 223 WKPTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGIG 302 (486)
T ss_dssp CCCCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSC
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHHcCCCEEEEEcCCCCCcHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHHHHH
Confidence 34568999998 999999999999999985 99999986432 12222 356789999999764 44443
Q ss_pred ----CceeeEEEEecCCCCCCC----------ChhhhHHHHHHHHhhcCCccEEEEEccce-eecCCCCccccCCCCCCC
Q 017914 121 ----LKNYTHLLVSIPPLEGTG----------DPMLKHGELLRSTLMNGHLQWLGYLSSTG-VYGHSGGAWVDEDYPANP 185 (364)
Q Consensus 121 ----~d~v~~~~~~~~~~~~~~----------~~~~~~~~~l~~a~~~~~~~r~v~~Ss~~-vy~~~~~~~~~E~~~~~~ 185 (364)
+|+|+|+++......-.. ........++.+++...+.++||++||.. +++.. .
T Consensus 303 ~~g~ld~VIh~AG~~~~~~l~~~~~~~~~~~~~~nv~g~~~L~~~~~~~~~~~~V~~SS~a~~~g~~------------g 370 (486)
T 2fr1_A 303 DDVPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTRELDLTAFVLFSSFASAFGAP------------G 370 (486)
T ss_dssp TTSCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTSCCSEEEEEEEHHHHTCCT------------T
T ss_pred hcCCCcEEEECCccCCCCccccCCHHHHHHHHHHHHHHHHHHHHHhCcCCCCEEEEEcChHhcCCCC------------C
Confidence 599999998654321000 11223345667777777889999999964 34322 2
Q ss_pred CChhHHHHHHHHHHHHHhhhhcCCcEEEEEecceecCCCChHHHHHHhcCcccccccccCCcccccccHHHHHHHHHHHc
Q 017914 186 TTELGRLRLSAEKGWLNLGRDLGISAQVFRLGGIYGPGRSSVDTIIKQLPLSEGQKMRRARQYTSRIHVDDICQVLSASI 265 (364)
Q Consensus 186 ~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l 265 (364)
...|+.+|...+.+..++. ..|+++++|+||.+.+.+- ..... ...+. .....+++.+|+++++..++
T Consensus 371 ~~~Yaaaka~l~~la~~~~-~~gi~v~~i~pG~~~~~gm--~~~~~-~~~~~--------~~g~~~i~~e~~a~~l~~~l 438 (486)
T 2fr1_A 371 LGGYAPGNAYLDGLAQQRR-SDGLPATAVAWGTWAGSGM--AEGPV-ADRFR--------RHGVIEMPPETACRALQNAL 438 (486)
T ss_dssp CTTTHHHHHHHHHHHHHHH-HTTCCCEEEEECCBC---------------CT--------TTTEECBCHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHH-hcCCeEEEEECCeeCCCcc--cchhH-HHHHH--------hcCCCCCCHHHHHHHHHHHH
Confidence 3579999999999887664 4599999999999876531 11000 00000 11235699999999999999
Q ss_pred cCCCCCceEEEeCCCCCCHHHHHHHH
Q 017914 266 DKPSAWNVYNVVDDDPAPREEVFAYA 291 (364)
Q Consensus 266 ~~~~~g~~~~i~~~~~~s~~el~~~i 291 (364)
..+... +.+. .+.|..+...+
T Consensus 439 ~~~~~~--~~v~---~~d~~~~~~~~ 459 (486)
T 2fr1_A 439 DRAEVC--PIVI---DVRWDRFLLAY 459 (486)
T ss_dssp HTTCSS--CEEC---EECHHHHHHHH
T ss_pred hCCCCe--EEEE---eCCHHHHhhhh
Confidence 876542 2222 25677765443
|
| >1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ... | Back alignment and structure |
|---|
Probab=99.57 E-value=1.8e-14 Score=129.41 Aligned_cols=154 Identities=8% Similarity=-0.080 Sum_probs=105.5
Q ss_pred CCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhh------------hCCceEEEccCChhhH--Hhhc----
Q 017914 59 PNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELE------------QSGFDVHLFNANETAL--MILT---- 119 (364)
Q Consensus 59 ~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~------------~~~~~~~~~D~~~~~~--~~~~---- 119 (364)
+++||||| +|+||++++++|+++|++|+++.|+..+..... ..++.++.+|++|.+. ..++
T Consensus 2 ~k~vlVTGas~GIG~ala~~L~~~G~~v~~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 81 (327)
T 1jtv_A 2 RTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVTE 81 (327)
T ss_dssp CEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCTT
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCceEEEEeecCcHHHHHHHHHHhhhccCCCCceEEEEecCCCHHHHHHHHHHHhc
Confidence 46899999 999999999999999999999888654432211 1457889999999764 3333
Q ss_pred -cCceeeEEEEecCCCCCCC----ChhhhHHH------HHHHH----hhcCCccEEEEEccceeecCCCCccccCCCCCC
Q 017914 120 -TLKNYTHLLVSIPPLEGTG----DPMLKHGE------LLRST----LMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPAN 184 (364)
Q Consensus 120 -~~d~v~~~~~~~~~~~~~~----~~~~~~~~------~l~~a----~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~ 184 (364)
.+|+++|+++......... +....... ++..+ +++.+.++||++||...+... .
T Consensus 82 g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~IV~isS~~~~~~~-----------~ 150 (327)
T 1jtv_A 82 GRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGL-----------P 150 (327)
T ss_dssp SCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTSCC-----------T
T ss_pred CCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEECCcccccCC-----------C
Confidence 4899999987543211001 11111122 23333 234467899999997654221 1
Q ss_pred CCChhHHHHHHHHHHHHHhhhh---cCCcEEEEEecceecCC
Q 017914 185 PTTELGRLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPG 223 (364)
Q Consensus 185 ~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~ 223 (364)
....|+.+|...|.+.+.++.+ .|+++++|+||.+..+.
T Consensus 151 ~~~~Y~aSK~a~~~~~~~la~el~~~gI~v~~v~PG~v~T~~ 192 (327)
T 1jtv_A 151 FNDVYCASKFALEGLCESLAVLLLPFGVHLSLIECGPVHTAF 192 (327)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC--
T ss_pred CChHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCcccChH
Confidence 3368999999999999988753 68999999999987653
|
| >2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae} | Back alignment and structure |
|---|
Probab=99.56 E-value=1.1e-13 Score=131.04 Aligned_cols=207 Identities=17% Similarity=0.145 Sum_probs=137.2
Q ss_pred CCCCCeEEEEc-CChhhHHHHHHHHhCCC-EEEEEEeCchhh-------hhhhh--CCceEEEccCChhhH--Hhhcc--
Q 017914 56 WQSPNRMLILG-MGFVGRIFAEKIKNQGW-VVSGTCTNVMKK-------KELEQ--SGFDVHLFNANETAL--MILTT-- 120 (364)
Q Consensus 56 ~~~~~~vlVtG-tG~iG~~l~~~L~~~g~-~V~~~~r~~~~~-------~~l~~--~~~~~~~~D~~~~~~--~~~~~-- 120 (364)
...+++||||| +|+||.+++++|.++|+ .|++++|+.... ..+.. ..+.++.+|++|.+. ..++.
T Consensus 256 ~~~~~~vLITGgtGgIG~~lA~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~~~ 335 (511)
T 2z5l_A 256 WQPSGTVLITGGMGAIGRRLARRLAAEGAERLVLTSRRGPEAPGAAELAEELRGHGCEVVHAACDVAERDALAALVTAYP 335 (511)
T ss_dssp CCCCSEEEEETTTSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHTTTCEEEEEECCSSCHHHHHHHHHHSC
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHhCCCcEEEEEecCCcccHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHhcCC
Confidence 34568999998 99999999999999999 688999986432 12222 247788999999774 44544
Q ss_pred CceeeEEEEecCCCCCCCC----------hhhhHHHHHHHHhhcC-CccEEEEEccce-eecCCCCccccCCCCCCCCCh
Q 017914 121 LKNYTHLLVSIPPLEGTGD----------PMLKHGELLRSTLMNG-HLQWLGYLSSTG-VYGHSGGAWVDEDYPANPTTE 188 (364)
Q Consensus 121 ~d~v~~~~~~~~~~~~~~~----------~~~~~~~~l~~a~~~~-~~~r~v~~Ss~~-vy~~~~~~~~~E~~~~~~~~~ 188 (364)
+|+|||+++.......... .......++.+++... +.++||++||.. +++.. ....
T Consensus 336 ld~VVh~AGv~~~~~~~~~~~~~~~~~~~~nv~g~~~L~~~~~~~~~~~~~V~~SS~a~~~g~~------------g~~~ 403 (511)
T 2z5l_A 336 PNAVFHTAGILDDAVIDTLSPESFETVRGAKVCGAELLHQLTADIKGLDAFVLFSSVTGTWGNA------------GQGA 403 (511)
T ss_dssp CSEEEECCCCCCCBCGGGCCHHHHHHHHHHHHHHHHHHHHHTSSCTTCCCEEEEEEGGGTTCCT------------TBHH
T ss_pred CcEEEECCcccCCcccccCCHHHHHHHHHHHHHHHHHHHHHHhhccCCCEEEEEeCHHhcCCCC------------CCHH
Confidence 8999999986543211110 1112223555555554 678999999874 44332 2358
Q ss_pred hHHHHHHHHHHHHHhhhhcCCcEEEEEecceecCC--CChHHHHHHhcCcccccccccCCcccccccHHHHHHHHHHHcc
Q 017914 189 LGRLRLSAEKGWLNLGRDLGISAQVFRLGGIYGPG--RSSVDTIIKQLPLSEGQKMRRARQYTSRIHVDDICQVLSASID 266 (364)
Q Consensus 189 Y~~sK~~~E~~~~~~~~~~~~~~~ilRp~~v~g~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~ 266 (364)
|+.+|...|.+.+.+. ..|+++++|+||.+.+.+ .......+. .....+++.+|+++++..++.
T Consensus 404 YaaaKa~ld~la~~~~-~~gi~v~sv~pG~~~~tgm~~~~~~~~~~-------------~~g~~~l~~e~~a~~l~~al~ 469 (511)
T 2z5l_A 404 YAAANAALDALAERRR-AAGLPATSVAWGLWGGGGMAAGAGEESLS-------------RRGLRAMDPDAAVDALLGAMG 469 (511)
T ss_dssp HHHHHHHHHHHHHHHH-TTTCCCEEEEECCBCSTTCCCCHHHHHHH-------------HHTBCCBCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH-HcCCcEEEEECCcccCCcccccccHHHHH-------------hcCCCCCCHHHHHHHHHHHHh
Confidence 9999999999998764 569999999999873222 111111111 011335889999999999998
Q ss_pred CCCCCceEEEeCCCCCCHHHHHHHHHH
Q 017914 267 KPSAWNVYNVVDDDPAPREEVFAYAWD 293 (364)
Q Consensus 267 ~~~~g~~~~i~~~~~~s~~el~~~i~~ 293 (364)
++.. .+.+. .+.|..+...+..
T Consensus 470 ~~~~--~v~v~---~~d~~~~~~~~~~ 491 (511)
T 2z5l_A 470 RNDV--CVTVV---DVDWERFAPATNA 491 (511)
T ss_dssp HTCS--EEEEC---CBCHHHHHHHHHH
T ss_pred CCCC--EEEEE---eCCHHHHHhhhcc
Confidence 7643 23232 3668777665543
|
| >1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A* | Back alignment and structure |
|---|
Probab=99.55 E-value=6.7e-14 Score=125.11 Aligned_cols=194 Identities=10% Similarity=0.052 Sum_probs=125.7
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEe---------Cchhhhh----hhhCCceEEEccCChhhH--H----
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCT---------NVMKKKE----LEQSGFDVHLFNANETAL--M---- 116 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r---------~~~~~~~----l~~~~~~~~~~D~~~~~~--~---- 116 (364)
..+++||||| +|+||+++++.|+++|++|++.+| +.++... +...+. ...+|+++.+. .
T Consensus 7 l~gk~~lVTGas~GIG~~~a~~La~~Ga~Vv~~~~~~~~~~~~R~~~~~~~~~~~l~~~~~-~~~~D~~~~~~~~~~~~~ 85 (319)
T 1gz6_A 7 FDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGG-KAVANYDSVEAGEKLVKT 85 (319)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTC-EEEEECCCGGGHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCcccccccCCHHHHHHHHHHHHhhCC-eEEEeCCCHHHHHHHHHH
Confidence 4568999999 999999999999999999999755 3333222 222232 23578888652 1
Q ss_pred ---hhccCceeeEEEEecCCCCCC----CChhhhHHHHHHH------H----hhcCCccEEEEEccce-eecCCCCcccc
Q 017914 117 ---ILTTLKNYTHLLVSIPPLEGT----GDPMLKHGELLRS------T----LMNGHLQWLGYLSSTG-VYGHSGGAWVD 178 (364)
Q Consensus 117 ---~~~~~d~v~~~~~~~~~~~~~----~~~~~~~~~~l~~------a----~~~~~~~r~v~~Ss~~-vy~~~~~~~~~ 178 (364)
.+..+|+++|+++........ .+.......|+.. + +++.+..++|++||.. .++..
T Consensus 86 ~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~grIV~vsS~~~~~~~~------ 159 (319)
T 1gz6_A 86 ALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGIYGNF------ 159 (319)
T ss_dssp HHHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCT------
T ss_pred HHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhccCCC------
Confidence 124689999999865432110 1111122223222 2 2344567999999864 34321
Q ss_pred CCCCCCCCChhHHHHHHHHHHHHHhhhh---cCCcEEEEEecceecCCCChHHHHHHhcCcccccccccCCcccccccHH
Q 017914 179 EDYPANPTTELGRLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRSSVDTIIKQLPLSEGQKMRRARQYTSRIHVD 255 (364)
Q Consensus 179 E~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~ 255 (364)
+...|+.+|...+.+.+.++.+ .|+++++|+||.+ .+.. . .. .. .....+++++
T Consensus 160 ------~~~~Y~aSK~a~~~~~~~la~el~~~gI~vn~v~PG~~-t~~~---~----~~-~~--------~~~~~~~~p~ 216 (319)
T 1gz6_A 160 ------GQANYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAG-SRMT---E----TV-MP--------EDLVEALKPE 216 (319)
T ss_dssp ------TCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECC-STTT---G----GG-SC--------HHHHHHSCGG
T ss_pred ------CCHHHHHHHHHHHHHHHHHHHHhcccCEEEEEEeCCCc-cccc---c----cc-CC--------hhhhccCCHH
Confidence 3468999999999999888754 4899999999986 2210 0 00 00 0122347889
Q ss_pred HHHHHHHHHccCCC--CCceEEEeCCC
Q 017914 256 DICQVLSASIDKPS--AWNVYNVVDDD 280 (364)
Q Consensus 256 Dva~~~~~~l~~~~--~g~~~~i~~~~ 280 (364)
|+|.+++.++..+. .|+.|++.+|.
T Consensus 217 dvA~~~~~l~s~~~~~tG~~~~v~GG~ 243 (319)
T 1gz6_A 217 YVAPLVLWLCHESCEENGGLFEVGAGW 243 (319)
T ss_dssp GTHHHHHHHTSTTCCCCSCEEEEETTE
T ss_pred HHHHHHHHHhCchhhcCCCEEEECCCe
Confidence 99999999987642 48899988763
|
| >1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A* | Back alignment and structure |
|---|
Probab=99.50 E-value=8.8e-13 Score=116.88 Aligned_cols=205 Identities=11% Similarity=-0.012 Sum_probs=122.1
Q ss_pred CCCCeEEEEc-C--ChhhHHHHHHHHhCCCEEEEEEeCch-----------hhhhhhh---CC----ceEEEcc------
Q 017914 57 QSPNRMLILG-M--GFVGRIFAEKIKNQGWVVSGTCTNVM-----------KKKELEQ---SG----FDVHLFN------ 109 (364)
Q Consensus 57 ~~~~~vlVtG-t--G~iG~~l~~~L~~~g~~V~~~~r~~~-----------~~~~l~~---~~----~~~~~~D------ 109 (364)
..++++|||| + |+||++++++|+++|++|++++|++. +.+.+.+ .. ...+.+|
T Consensus 6 l~~k~~lVTGas~~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (297)
T 1d7o_A 6 LRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVLPDGSLMEIKKVYPLDAVFDNP 85 (297)
T ss_dssp CTTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTGGGBCTTSSBCCEEEEEEECTTCCSG
T ss_pred cCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEeeccccchhhhhhhhhhHhhhhhhhccccccccccccccceeccch
Confidence 4568999998 8 99999999999999999999987531 1111111 01 1333333
Q ss_pred --CCh------------hh-H--------HhhccCceeeEEEEecCC-CCCCC-----ChhhhHHHHH------HHHhhc
Q 017914 110 --ANE------------TA-L--------MILTTLKNYTHLLVSIPP-LEGTG-----DPMLKHGELL------RSTLMN 154 (364)
Q Consensus 110 --~~~------------~~-~--------~~~~~~d~v~~~~~~~~~-~~~~~-----~~~~~~~~~l------~~a~~~ 154 (364)
+.+ .+ . ..+..+|+++|+++.... ..... +.......|+ ..++..
T Consensus 86 ~dv~~Dv~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~ 165 (297)
T 1d7o_A 86 EDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSHFLP 165 (297)
T ss_dssp GGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGG
T ss_pred hhhhhhhhccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHH
Confidence 322 11 1 112368999998874321 11111 1111222233 333321
Q ss_pred C--CccEEEEEccceeecCCCCccccCCCCCCCC-ChhHHHHHHHHHHHHHhhhh----cCCcEEEEEecceecCCCCh-
Q 017914 155 G--HLQWLGYLSSTGVYGHSGGAWVDEDYPANPT-TELGRLRLSAEKGWLNLGRD----LGISAQVFRLGGIYGPGRSS- 226 (364)
Q Consensus 155 ~--~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~-~~Y~~sK~~~E~~~~~~~~~----~~~~~~ilRp~~v~g~~~~~- 226 (364)
. ...++|++||...+... ... ..|+.+|...+.+.+.++.+ .|+++++|+||.+.++....
T Consensus 166 ~m~~~g~iv~isS~~~~~~~-----------~~~~~~Y~asKaa~~~~~~~la~e~~~~~gi~vn~v~PG~v~T~~~~~~ 234 (297)
T 1d7o_A 166 IMNPGGASISLTYIASERII-----------PGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAAKAI 234 (297)
T ss_dssp GEEEEEEEEEEECGGGTSCC-----------TTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCBCCCSSCC
T ss_pred HhccCceEEEEeccccccCC-----------CCcchHHHHHHHHHHHHHHHHHHHhCcccCcEEEEEeccccccchhhhc
Confidence 1 12589999987543211 112 47999999999999888754 58999999999998875321
Q ss_pred --HHHHHHhcCcccccccccCCcccccccHHHHHHHHHHHccCC---CCCceEEEeCCC
Q 017914 227 --VDTIIKQLPLSEGQKMRRARQYTSRIHVDDICQVLSASIDKP---SAWNVYNVVDDD 280 (364)
Q Consensus 227 --~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~---~~g~~~~i~~~~ 280 (364)
...+.... ....+ ...+.+++|+|++++.++... -.|+.+++.+|.
T Consensus 235 ~~~~~~~~~~--~~~~p------~~r~~~pedvA~~v~~l~s~~~~~itG~~i~vdgG~ 285 (297)
T 1d7o_A 235 GFIDTMIEYS--YNNAP------IQKTLTADEVGNAAAFLVSPLASAITGATIYVDNGL 285 (297)
T ss_dssp SHHHHHHHHH--HHHSS------SCCCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTG
T ss_pred cccHHHHHHh--hccCC------CCCCCCHHHHHHHHHHHhCccccCCCCCEEEECCCc
Confidence 11111110 00000 112367999999999998753 248899998873
|
| >3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A* | Back alignment and structure |
|---|
Probab=99.43 E-value=2.2e-12 Score=121.36 Aligned_cols=200 Identities=16% Similarity=0.133 Sum_probs=131.2
Q ss_pred CCCeEEEEc-CChhhHHHHHHHHhCCC-EEEEEEeCchhhh-------hhhh--CCceEEEccCChhhH--Hhhc-----
Q 017914 58 SPNRMLILG-MGFVGRIFAEKIKNQGW-VVSGTCTNVMKKK-------ELEQ--SGFDVHLFNANETAL--MILT----- 119 (364)
Q Consensus 58 ~~~~vlVtG-tG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~-------~l~~--~~~~~~~~D~~~~~~--~~~~----- 119 (364)
+++++|||| +|.||.+++++|.++|+ .|+++.|+....+ .+.. ..+.++.+|++|.+. ..++
T Consensus 238 ~~~~vLITGgsgGIG~alA~~La~~Ga~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~ 317 (496)
T 3mje_A 238 VHGSVLVTGGTGGIGGRVARRLAEQGAAHLVLTSRRGADAPGAAELRAELEQLGVRVTIAACDAADREALAALLAELPED 317 (496)
T ss_dssp CCSEEEEETCSSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTCCTT
T ss_pred CCCEEEEECCCCchHHHHHHHHHHCCCcEEEEEeCCCCChHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHh
Confidence 348999998 99999999999999998 7888888643321 1222 357889999999764 3332
Q ss_pred -cCceeeEEEEecCCCCCCCC-----------hhhhHHHHHHHHhhcCCccEEEEEcccee-ecCCCCccccCCCCCCCC
Q 017914 120 -TLKNYTHLLVSIPPLEGTGD-----------PMLKHGELLRSTLMNGHLQWLGYLSSTGV-YGHSGGAWVDEDYPANPT 186 (364)
Q Consensus 120 -~~d~v~~~~~~~~~~~~~~~-----------~~~~~~~~l~~a~~~~~~~r~v~~Ss~~v-y~~~~~~~~~E~~~~~~~ 186 (364)
.+|+|+|+++.........+ .......++.+++...+.++||++||... ++.. ..
T Consensus 318 g~ld~vVh~AGv~~~~~~l~~~t~e~~~~vl~~nv~g~~~L~~~~~~~~~~~iV~~SS~a~~~g~~------------g~ 385 (496)
T 3mje_A 318 APLTAVFHSAGVAHDDAPVADLTLGQLDALMRAKLTAARHLHELTADLDLDAFVLFSSGAAVWGSG------------GQ 385 (496)
T ss_dssp SCEEEEEECCCCCCSCCCTTTCCHHHHHHHHHTTHHHHHHHHHHHTTSCCSEEEEEEEHHHHTTCT------------TC
T ss_pred CCCeEEEECCcccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHhhccCCCEEEEEeChHhcCCCC------------Cc
Confidence 47899999886522211111 11122345666666777889999998653 3321 23
Q ss_pred ChhHHHHHHHHHHHHHhhhhcCCcEEEEEecceecCCCCh----HHHHHHhcCcccccccccCCcccccccHHHHHHHHH
Q 017914 187 TELGRLRLSAEKGWLNLGRDLGISAQVFRLGGIYGPGRSS----VDTIIKQLPLSEGQKMRRARQYTSRIHVDDICQVLS 262 (364)
Q Consensus 187 ~~Y~~sK~~~E~~~~~~~~~~~~~~~ilRp~~v~g~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~ 262 (364)
..|+.+|...+.+.+++. ..|+++++|.||.+.+.+-.. ...+.. .....+..++.++++.
T Consensus 386 ~~YaAaKa~ldala~~~~-~~Gi~v~sV~pG~w~~~gm~~~~~~~~~l~~--------------~g~~~l~pe~~~~~l~ 450 (496)
T 3mje_A 386 PGYAAANAYLDALAEHRR-SLGLTASSVAWGTWGEVGMATDPEVHDRLVR--------------QGVLAMEPEHALGALD 450 (496)
T ss_dssp HHHHHHHHHHHHHHHHHH-HTTCCCEEEEECEESSSCC------CHHHHH--------------TTEEEECHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH-hcCCeEEEEECCcccCCccccChHHHHHHHh--------------cCCCCCCHHHHHHHHH
Confidence 579999999999987664 569999999999876544211 111111 0122367899999999
Q ss_pred HHccCCCCCceEEEeCCCCCCHHHHHH
Q 017914 263 ASIDKPSAWNVYNVVDDDPAPREEVFA 289 (364)
Q Consensus 263 ~~l~~~~~g~~~~i~~~~~~s~~el~~ 289 (364)
.++..+... .+.. .+.|..+..
T Consensus 451 ~~l~~~~~~---~~v~--~ldw~~~~~ 472 (496)
T 3mje_A 451 QMLENDDTA---AAIT--LMDWEMFAP 472 (496)
T ss_dssp HHHHHTCSE---EEEC--EECHHHHHH
T ss_pred HHHcCCCce---EEEE--EccHHHHHh
Confidence 999876442 2222 355665543
|
| >3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster} | Back alignment and structure |
|---|
Probab=99.40 E-value=2.7e-12 Score=124.58 Aligned_cols=195 Identities=8% Similarity=-0.044 Sum_probs=117.6
Q ss_pred CCCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEe---------Cchhhhh----hhhCCceEEEccCChhhH--Hhh-
Q 017914 56 WQSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCT---------NVMKKKE----LEQSGFDVHLFNANETAL--MIL- 118 (364)
Q Consensus 56 ~~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r---------~~~~~~~----l~~~~~~~~~~D~~~~~~--~~~- 118 (364)
...++++|||| +|.||++++++|+++|++|++++| +.+..+. +...+.. +.+|++|.+. ..+
T Consensus 16 ~l~gk~~lVTGas~GIG~aiA~~La~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~D~~d~~~~~~~~~ 94 (613)
T 3oml_A 16 RYDGRVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRKAGGE-AVADYNSVIDGAKVIE 94 (613)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEC--------------CHHHHHHHHHHTTCC-EEECCCCGGGHHHHHC
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcccccccCCHHHHHHHHHHHHHhCCe-EEEEeCCHHHHHHHHH
Confidence 45678999999 999999999999999999999987 3332222 2223333 3478887542 222
Q ss_pred ------ccCceeeEEEEecCCCCCCC----ChhhhHHHHHH------HH----hhcCCccEEEEEccceeecCCCCcccc
Q 017914 119 ------TTLKNYTHLLVSIPPLEGTG----DPMLKHGELLR------ST----LMNGHLQWLGYLSSTGVYGHSGGAWVD 178 (364)
Q Consensus 119 ------~~~d~v~~~~~~~~~~~~~~----~~~~~~~~~l~------~a----~~~~~~~r~v~~Ss~~vy~~~~~~~~~ 178 (364)
..+|+++|+|+......... +.......|+. .+ +++.+..++|++||...+...
T Consensus 95 ~~~~~~g~iDiLVnnAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~l~~~~~p~m~~~~~g~IV~isS~a~~~~~------ 168 (613)
T 3oml_A 95 TAIKAFGRVDILVNNAGILRDRSLVKTSEQDWNLVNDVHLKGSFKCTQAAFPYMKKQNYGRIIMTSSNSGIYGN------ 168 (613)
T ss_dssp ----------CEECCCCCCCCCCSTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEECCHHHHHCC------
T ss_pred HHHHHCCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECCHHHcCCC------
Confidence 35799999987654322111 11112222322 22 245566799999986533211
Q ss_pred CCCCCCCCChhHHHHHHHHHHHHHhhhh---cCCcEEEEEecceecCCCChHHHHHHhcCcccccccccCCcccccccHH
Q 017914 179 EDYPANPTTELGRLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRSSVDTIIKQLPLSEGQKMRRARQYTSRIHVD 255 (364)
Q Consensus 179 E~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~ 255 (364)
.....|+.+|.+.+.+.+.++.+ .|+.++.|.||.+........ .......+..+
T Consensus 169 -----~~~~~Y~asKaal~~lt~~la~e~~~~gI~vn~v~Pg~~t~~~~~~~-----------------~~~~~~~~~pe 226 (613)
T 3oml_A 169 -----FGQVNYTAAKMGLIGLANTVAIEGARNNVLCNVIVPTAASRMTEGIL-----------------PDILFNELKPK 226 (613)
T ss_dssp -----TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC------CCCC-----------------CHHHHTTCCGG
T ss_pred -----CCChHHHHHHHHHHHHHHHHHHHhCccCeEEEEEECCCCChhhhhcc-----------------chhhhhcCCHH
Confidence 13367999999999999888754 489999999985421111100 01122346789
Q ss_pred HHHHHHHHHccCCC--CCceEEEeCC
Q 017914 256 DICQVLSASIDKPS--AWNVYNVVDD 279 (364)
Q Consensus 256 Dva~~~~~~l~~~~--~g~~~~i~~~ 279 (364)
|+|.+++.++.... .|+++++.+|
T Consensus 227 dvA~~v~~L~s~~~~~tG~~i~vdGG 252 (613)
T 3oml_A 227 LIAPVVAYLCHESCEDNGSYIESAAG 252 (613)
T ss_dssp GTHHHHHHTTSTTCCCCSCEEEEETT
T ss_pred HHHHHHHHhcCCCcCCCceEEEECCC
Confidence 99999999887652 3788887655
|
| >3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae} | Back alignment and structure |
|---|
Probab=99.33 E-value=2.8e-11 Score=115.08 Aligned_cols=206 Identities=11% Similarity=0.004 Sum_probs=128.0
Q ss_pred CCCCCeEEEEc-CChhhHHHHHHHHhCCCE-EEEE-EeCchh-------------hh----hhhh--CCceEEEccCChh
Q 017914 56 WQSPNRMLILG-MGFVGRIFAEKIKNQGWV-VSGT-CTNVMK-------------KK----ELEQ--SGFDVHLFNANET 113 (364)
Q Consensus 56 ~~~~~~vlVtG-tG~iG~~l~~~L~~~g~~-V~~~-~r~~~~-------------~~----~l~~--~~~~~~~~D~~~~ 113 (364)
...++++|||| +|.||.+++++|.++|++ |+++ +|+... .. .+.. ..+.++.+|++|.
T Consensus 248 ~~~~~~vLITGgsgGIG~~lA~~La~~G~~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvtd~ 327 (525)
T 3qp9_A 248 WQADGTVLVTGAEEPAAAEAARRLARDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELADLGATATVVTCDLTDA 327 (525)
T ss_dssp SCTTSEEEESSTTSHHHHHHHHHHHHHTCCEEEEEECCCC---------------CHHHHHHHHHHTCEEEEEECCTTSH
T ss_pred ecCCCEEEEECCCCcHHHHHHHHHHHcCCCEEEEEeCCCCCCccccccccccCHHHHHHHHHHHhcCCEEEEEECCCCCH
Confidence 34568999998 999999999999999997 5555 676422 11 1222 3578899999997
Q ss_pred hH--Hhhc------cCceeeEEEEecCCCCCCCCh----hh------hHHHHHHHHhhcCC-----ccEEEEEccceeec
Q 017914 114 AL--MILT------TLKNYTHLLVSIPPLEGTGDP----ML------KHGELLRSTLMNGH-----LQWLGYLSSTGVYG 170 (364)
Q Consensus 114 ~~--~~~~------~~d~v~~~~~~~~~~~~~~~~----~~------~~~~~l~~a~~~~~-----~~r~v~~Ss~~vy~ 170 (364)
+. ..++ .+|+|+|+++......-.... .. ....++.+++.... ..+||++||...+-
T Consensus 328 ~~v~~~~~~i~~~g~id~vVh~AGv~~~~~~~~~~~~~~~~v~~~nv~g~~~L~~~~~~~~~~~~~~~~iV~~SS~a~~~ 407 (525)
T 3qp9_A 328 EAAARLLAGVSDAHPLSAVLHLPPTVDSEPLAATDADALARVVTAKATAALHLDRLLREAAAAGGRPPVLVLFSSVAAIW 407 (525)
T ss_dssp HHHHHHHHTSCTTSCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHTC----CCCEEEEEEEGGGTT
T ss_pred HHHHHHHHHHHhcCCCcEEEECCcCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHhccccccCCCCCEEEEECCHHHcC
Confidence 64 3332 469999999865442211111 11 11224444443332 67999999865432
Q ss_pred CCCCccccCCCCCCCCChhHHHHHHHHHHHHHhhhhcCCcEEEEEecceecCCC---ChHHHHHHhcCcccccccccCCc
Q 017914 171 HSGGAWVDEDYPANPTTELGRLRLSAEKGWLNLGRDLGISAQVFRLGGIYGPGR---SSVDTIIKQLPLSEGQKMRRARQ 247 (364)
Q Consensus 171 ~~~~~~~~E~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilRp~~v~g~~~---~~~~~~~~~~~~~~~~~~~~~~~ 247 (364)
... ....|+.+|...+.+..++. ..|+++++|.||.+ +.+- ......+...
T Consensus 408 g~~-----------g~~~YaaaKa~l~~lA~~~~-~~gi~v~sI~pG~~-~tgm~~~~~~~~~~~~~------------- 461 (525)
T 3qp9_A 408 GGA-----------GQGAYAAGTAFLDALAGQHR-ADGPTVTSVAWSPW-EGSRVTEGATGERLRRL------------- 461 (525)
T ss_dssp CCT-----------TCHHHHHHHHHHHHHHTSCC-SSCCEEEEEEECCB-TTSGGGSSHHHHHHHHT-------------
T ss_pred CCC-----------CCHHHHHHHHHHHHHHHHHH-hCCCCEEEEECCcc-ccccccchhhHHHHHhc-------------
Confidence 111 23679999999999876654 45999999999988 2210 1111111110
Q ss_pred ccccccHHHHHHHHHHHccCCCCCceEEEeCCCCCCHHHHHHHHH
Q 017914 248 YTSRIHVDDICQVLSASIDKPSAWNVYNVVDDDPAPREEVFAYAW 292 (364)
Q Consensus 248 ~~~~i~v~Dva~~~~~~l~~~~~g~~~~i~~~~~~s~~el~~~i~ 292 (364)
....+..+++++++..++..+.. ..+.. .+.|..+...+.
T Consensus 462 g~~~l~pee~a~~l~~~l~~~~~---~v~v~--~~dw~~~~~~~~ 501 (525)
T 3qp9_A 462 GLRPLAPATALTALDTALGHGDT---AVTIA--DVDWSSFAPGFT 501 (525)
T ss_dssp TBCCBCHHHHHHHHHHHHHHTCS---EEEEC--CBCHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHhCCCC---eEEEE--eCCHHHHHhhcc
Confidence 12237899999999999987643 22222 366766655443
|
| >3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ... | Back alignment and structure |
|---|
Probab=99.32 E-value=7.9e-12 Score=112.34 Aligned_cols=152 Identities=11% Similarity=-0.042 Sum_probs=95.0
Q ss_pred CCeEEEEc-CC--hhhHHHHHHHHhCCCEEEEEEeCc---------hhhhhh----h-----hCCceEEEccCChh--h-
Q 017914 59 PNRMLILG-MG--FVGRIFAEKIKNQGWVVSGTCTNV---------MKKKEL----E-----QSGFDVHLFNANET--A- 114 (364)
Q Consensus 59 ~~~vlVtG-tG--~iG~~l~~~L~~~g~~V~~~~r~~---------~~~~~l----~-----~~~~~~~~~D~~~~--~- 114 (364)
++++|||| ++ .||.+++++|+++|++|++.+|++ ++.... . ...+.++.+|+++. +
T Consensus 2 ~k~~lITGas~~~GIG~aiA~~la~~G~~Vv~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~ 81 (329)
T 3lt0_A 2 EDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTAND 81 (329)
T ss_dssp CCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECHHHHHHHHHHHHTTTTTGGGBCSSSCBCCEEEEEECCTTCSSGGG
T ss_pred CcEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecCccccccccchHHHHHHHHHHHhhcccccccccccccccccchhh
Confidence 47899998 53 899999999999999999877654 111111 0 02256788888765 3
Q ss_pred -----------------H---------HhhccCceeeEEEEecC-CCCCCC-----ChhhhHHHHHHHHh------h---
Q 017914 115 -----------------L---------MILTTLKNYTHLLVSIP-PLEGTG-----DPMLKHGELLRSTL------M--- 153 (364)
Q Consensus 115 -----------------~---------~~~~~~d~v~~~~~~~~-~~~~~~-----~~~~~~~~~l~~a~------~--- 153 (364)
. ..+..+|+++|+++... ...... +.......|+.... .
T Consensus 82 ~~~~~~~~~~~Dlsd~~~v~~~~~~~~~~~g~iDilVnnAGi~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m 161 (329)
T 3lt0_A 82 IDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNIM 161 (329)
T ss_dssp CCHHHHTSHHHHTCCSCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGE
T ss_pred hhhhhcccccccccCHHHHHHHHHHHHHhcCCCcEEEECCcccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 1 11235788888887432 111111 11112223333222 1
Q ss_pred cCCccEEEEEccceeecCCCCccccCCCCCCCCC-hhHHHHHHHHHHHHHhhhh----cCCcEEEEEecceecC
Q 017914 154 NGHLQWLGYLSSTGVYGHSGGAWVDEDYPANPTT-ELGRLRLSAEKGWLNLGRD----LGISAQVFRLGGIYGP 222 (364)
Q Consensus 154 ~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~-~Y~~sK~~~E~~~~~~~~~----~~~~~~ilRp~~v~g~ 222 (364)
..+ .++|++||...+... .... .|+.+|...+.+.+.++.+ .|++++.|.||.+..+
T Consensus 162 ~~~-g~Iv~isS~~~~~~~-----------~~~~~~Y~asKaal~~~~~~la~el~~~~gI~vn~v~PG~v~T~ 223 (329)
T 3lt0_A 162 KPQ-SSIISLTYHASQKVV-----------PGYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKSR 223 (329)
T ss_dssp EEE-EEEEEEECGGGTSCC-----------TTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCH
T ss_pred hhC-CeEEEEeCccccCCC-----------CcchHHHHHHHHHHHHHHHHHHHHhCCccCeEEEEEecceeech
Confidence 112 589999986533211 1223 7999999999998887643 5899999999988643
|
| >2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella} | Back alignment and structure |
|---|
Probab=99.31 E-value=3.1e-11 Score=108.04 Aligned_cols=214 Identities=8% Similarity=-0.032 Sum_probs=106.4
Q ss_pred CCCCeEEEEc---CChhhHHHHHHHHhCCCEEEEEEeCc-----------hhhhh---------------hhhCC-----
Q 017914 57 QSPNRMLILG---MGFVGRIFAEKIKNQGWVVSGTCTNV-----------MKKKE---------------LEQSG----- 102 (364)
Q Consensus 57 ~~~~~vlVtG---tG~iG~~l~~~L~~~g~~V~~~~r~~-----------~~~~~---------------l~~~~----- 102 (364)
..++++|||| +|+||+++++.|+++|++|++++|++ +.... +...+
T Consensus 7 l~~k~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (319)
T 2ptg_A 7 LRGKTAFVAGVADSNGYGWAICKLLRAAGARVLVGTWPPVYSIFKKGLESSRFEQDSFYAQEPSSKVAAEAAEKPVDLVF 86 (319)
T ss_dssp CTTCEEEEECCCCTTSHHHHHHHHHHHTTCEEEEEECHHHHHHHHC--------------------------------CC
T ss_pred cCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEEEeccccccchhhhhhhhhhhhhhhhhcchhhhHHHHhhhccccccc
Confidence 3457899997 49999999999999999999998753 11110 00000
Q ss_pred ceEEEccC------------Ch--------h-hH--------HhhccCceeeEEEEecCC-CCCCC-----ChhhhHHHH
Q 017914 103 FDVHLFNA------------NE--------T-AL--------MILTTLKNYTHLLVSIPP-LEGTG-----DPMLKHGEL 147 (364)
Q Consensus 103 ~~~~~~D~------------~~--------~-~~--------~~~~~~d~v~~~~~~~~~-~~~~~-----~~~~~~~~~ 147 (364)
..++.+|+ +| . +. ..+..+|+++|+++.... ..... +.......|
T Consensus 87 ~~~~~~d~~~~~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~vN 166 (319)
T 2ptg_A 87 DKIYPLDAVFDTPQDVPPEVSSNKRYAGVGGFTISEVAEAVRADVGQIDILVHSLANGPEVTKPLLQTSRKGYLAAVSSS 166 (319)
T ss_dssp SEEEECCTTCCSGGGSCHHHHCC--CTTSCCCSHHHHHHHHHHHHSCEEEEEEEEECCSSSSSCGGGCCHHHHHHHHHHH
T ss_pred cccccccccccccccccchhcccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCCCCCCccccCCHHHHHHHHhHh
Confidence 24454443 21 1 11 122468999999985421 11111 111122223
Q ss_pred H------HHHhhcC--CccEEEEEccceeecCCCCccccCCCCCCCC-ChhHHHHHHHHHHHHHhhhh----cCCcEEEE
Q 017914 148 L------RSTLMNG--HLQWLGYLSSTGVYGHSGGAWVDEDYPANPT-TELGRLRLSAEKGWLNLGRD----LGISAQVF 214 (364)
Q Consensus 148 l------~~a~~~~--~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~-~~Y~~sK~~~E~~~~~~~~~----~~~~~~il 214 (364)
+ ..++... .-.++|++||...+.... .. ..|+.+|...+.+.+.++.+ .|+++++|
T Consensus 167 ~~g~~~l~~~~~~~m~~~g~Iv~isS~~~~~~~~-----------~~~~~Y~asKaal~~l~~~la~el~~~~gIrvn~v 235 (319)
T 2ptg_A 167 SYSFVSLLQHFLPLMKEGGSALALSYIASEKVIP-----------GYGGGMSSAKAALESDCRTLAFEAGRARAVRVNCI 235 (319)
T ss_dssp THHHHHHHHHHGGGEEEEEEEEEEEECC-----------------------------THHHHHHHHHHHHHHHCCEEEEE
T ss_pred hHHHHHHHHHHHHHHhcCceEEEEeccccccccC-----------ccchhhHHHHHHHHHHHHHHHHHhccccCeeEEEE
Confidence 3 2222211 125899999875432111 11 36999999999999887644 58999999
Q ss_pred EecceecCCCChHHHHHHhcCcccc-cccccCCcccccccHHHHHHHHHHHccCC---CCCceEEEeCCCC
Q 017914 215 RLGGIYGPGRSSVDTIIKQLPLSEG-QKMRRARQYTSRIHVDDICQVLSASIDKP---SAWNVYNVVDDDP 281 (364)
Q Consensus 215 Rp~~v~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~v~Dva~~~~~~l~~~---~~g~~~~i~~~~~ 281 (364)
+||.+..+....+..-......... ..........-+...+|+|++++.++... -.|+.+.+.+|..
T Consensus 236 ~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~peevA~~v~~L~s~~~~~itG~~i~vdGG~~ 306 (319)
T 2ptg_A 236 SAGPLKSRAASAIGKAGDKTFIDLAIDYSEANAPLQKELESDDVGRAALFLLSPLARAVTGATLYVDNGLH 306 (319)
T ss_dssp EECCCC-------------------------------CCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTCT
T ss_pred eeCCccChhhhhcccccchhhHHHHHHHHhccCCCCCCCCHHHHHHHHHHHhCcccCCccCCEEEECCCce
Confidence 9999876532111000000000000 00000001122467999999999999753 3488999887743
|
| >2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A* | Back alignment and structure |
|---|
Probab=99.31 E-value=3.5e-11 Score=107.45 Aligned_cols=205 Identities=12% Similarity=0.015 Sum_probs=118.6
Q ss_pred CCCCeEEEEc---CChhhHHHHHHHHhCCCEEEEEEeCch-----------hhhhhhh---CC----ceEEEccC-----
Q 017914 57 QSPNRMLILG---MGFVGRIFAEKIKNQGWVVSGTCTNVM-----------KKKELEQ---SG----FDVHLFNA----- 110 (364)
Q Consensus 57 ~~~~~vlVtG---tG~iG~~l~~~L~~~g~~V~~~~r~~~-----------~~~~l~~---~~----~~~~~~D~----- 110 (364)
..++++|||| +|+||+++++.|+++|++|++++|++. ....+.+ .+ ..++.+|+
T Consensus 7 l~gk~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 86 (315)
T 2o2s_A 7 LRGQTAFVAGVADSHGYGWAIAKHLASAGARVALGTWPPVLGLFQKSLQSGRLDEDRKLPDGSLIEFAGVYPLDAAFDKP 86 (315)
T ss_dssp CTTCEEEEECCSSSSSHHHHHHHHHHTTTCEEEEEECHHHHHHHHHHHHHTTTHHHHBCTTSCBCCCSCEEECCTTCSST
T ss_pred CCCCEEEEeCCCCCCChHHHHHHHHHHCCCEEEEEecccccchhhhhhhhhhhhhhhhhhcccccccccccccccccccc
Confidence 3467899997 499999999999999999999987531 1111111 11 24554443
Q ss_pred -------Ch--------hh-H--------HhhccCceeeEEEEecCC-CCCCC-----ChhhhHHHHHH------HHhhc
Q 017914 111 -------NE--------TA-L--------MILTTLKNYTHLLVSIPP-LEGTG-----DPMLKHGELLR------STLMN 154 (364)
Q Consensus 111 -------~~--------~~-~--------~~~~~~d~v~~~~~~~~~-~~~~~-----~~~~~~~~~l~------~a~~~ 154 (364)
+| .+ . ..+..+|+++|+++.... ..... +.......|+. .++..
T Consensus 87 ~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~ 166 (315)
T 2o2s_A 87 EDVPQDIKDNKRYAGVDGYTIKEVAVKVKQDLGNIDILVHSLANGPEVTKPLLETSRKGYLAASSNSAYSFVSLLQHFGP 166 (315)
T ss_dssp TSSCHHHHTCGGGSSCCCCSHHHHHHHHHHHHCSEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHST
T ss_pred chhhhhhhcccccccCCHHHHHHHHHHHHHhcCCCCEEEECCccCCcCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHH
Confidence 22 11 1 112368899998875321 11111 11112222332 22221
Q ss_pred C--CccEEEEEccceeecCCCCccccCCCCCCCC-ChhHHHHHHHHHHHHHhhhh----cCCcEEEEEecceecCCC---
Q 017914 155 G--HLQWLGYLSSTGVYGHSGGAWVDEDYPANPT-TELGRLRLSAEKGWLNLGRD----LGISAQVFRLGGIYGPGR--- 224 (364)
Q Consensus 155 ~--~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~-~~Y~~sK~~~E~~~~~~~~~----~~~~~~ilRp~~v~g~~~--- 224 (364)
. .-.++|++||...+.... .. ..|+.+|...+.+.+.++.+ .|++++.|+||.+..+..
T Consensus 167 ~m~~~g~Iv~isS~~~~~~~~-----------~~~~~Y~asKaal~~l~~~la~el~~~~gIrvn~v~PG~v~T~~~~~~ 235 (315)
T 2o2s_A 167 IMNEGGSAVTLSYLAAERVVP-----------GYGGGMSSAKAALESDTRTLAWEAGQKYGVRVNAISAGPLKSRAASAI 235 (315)
T ss_dssp TEEEEEEEEEEEEGGGTSCCT-----------TCCTTHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEECCCCCHHHHHT
T ss_pred HHhcCCEEEEEecccccccCC-----------CccHHHHHHHHHHHHHHHHHHHHhCcccCeEEEEEecccccchhhhhc
Confidence 1 125899999875432111 12 37999999999999887643 589999999998864310
Q ss_pred ------ChHHHHHHhcCcccccccccCCcccccccHHHHHHHHHHHccCC---CCCceEEEeCCC
Q 017914 225 ------SSVDTIIKQLPLSEGQKMRRARQYTSRIHVDDICQVLSASIDKP---SAWNVYNVVDDD 280 (364)
Q Consensus 225 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~---~~g~~~~i~~~~ 280 (364)
.+...+... +... ....-+...+|+|++++.++... -.|+.+.+.+|.
T Consensus 236 ~~~~~~~~~~~~~~~--~~~~------~p~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~ 292 (315)
T 2o2s_A 236 GKSGEKSFIDYAIDY--SYNN------APLRRDLHSDDVGGAALFLLSPLARAVSGVTLYVDNGL 292 (315)
T ss_dssp TCSSSSCHHHHHHHH--HHHH------SSSCCCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTG
T ss_pred cccccchhHHHHHHH--Hhcc------CCCCCCCCHHHHHHHHHHHhCchhccCcCCEEEECCCe
Confidence 000000000 0000 00112367899999999998753 248888887763
|
| >2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} | Back alignment and structure |
|---|
Probab=99.17 E-value=1.3e-09 Score=105.49 Aligned_cols=213 Identities=9% Similarity=-0.018 Sum_probs=130.4
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchh--hhhhhhC--CceEEEccC-ChhhH------HhhccCcee
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMK--KKELEQS--GFDVHLFNA-NETAL------MILTTLKNY 124 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~--~~~l~~~--~~~~~~~D~-~~~~~------~~~~~~d~v 124 (364)
..++.+|||| ++.||+.+++.|.++|++|++.+|.... ...+... .+..+.+|+ .+.+. +.+..+|++
T Consensus 320 l~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~~~~~~~~~~~~~~~G~iDiL 399 (604)
T 2et6_A 320 LKDKVVLITGAGAGLGKEYAKWFAKYGAKVVVNDFKDATKTVDEIKAAGGEAWPDQHDVAKDSEAIIKNVIDKYGTIDIL 399 (604)
T ss_dssp CTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHHHHTTCEEEEECCCHHHHHHHHHHHHHHHHSCCCEE
T ss_pred cCCCeEEEECcchHHHHHHHHHHHHCCCEEEEEeCccHHHHHHHHHhcCCeEEEEEcChHHHHHHHHHHHHHhcCCCCEE
Confidence 4567899999 8999999999999999999998864221 1223222 345667888 55431 233568999
Q ss_pred eEEEEecCCCC--CCC--ChhhhHHHHH----------HHHhhcCCccEEEEEccceeecCCCCccccCCCCCCCCChhH
Q 017914 125 THLLVSIPPLE--GTG--DPMLKHGELL----------RSTLMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANPTTELG 190 (364)
Q Consensus 125 ~~~~~~~~~~~--~~~--~~~~~~~~~l----------~~a~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~ 190 (364)
+|.++...... ... +.......|+ +..+++.+-.++|++||...+-... ....|+
T Consensus 400 VnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~ag~~~~~-----------~~~~Y~ 468 (604)
T 2et6_A 400 VNNAGILRDRSFAKMSKQEWDSVQQVHLIGTFNLSRLAWPYFVEKQFGRIINITSTSGIYGNF-----------GQANYS 468 (604)
T ss_dssp EECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHSCCT-----------TBHHHH
T ss_pred EECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhccCCC-----------CChhHH
Confidence 99887543221 111 1111122232 2223344456999999864321111 235799
Q ss_pred HHHHHHHHHHHHhhhh---cCCcEEEEEecceecCCCChHHHHHHhcCcccccccccCCcccccccHHHHHHHHHHHccC
Q 017914 191 RLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRSSVDTIIKQLPLSEGQKMRRARQYTSRIHVDDICQVLSASIDK 267 (364)
Q Consensus 191 ~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~ 267 (364)
.+|.....+.+.++.+ .|++++.|.||. -.+ ........ ........+|+|.+++.++..
T Consensus 469 asKaal~~lt~~la~El~~~gIrVn~v~PG~-~T~---m~~~~~~~-------------~~~~~~~pe~vA~~v~~L~s~ 531 (604)
T 2et6_A 469 SSKAGILGLSKTMAIEGAKNNIKVNIVAPHA-ETA---MTLSIMRE-------------QDKNLYHADQVAPLLVYLGTD 531 (604)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTEEEEEEEECC-CCC---C----------------------CCSSCGGGTHHHHHHTTST
T ss_pred HHHHHHHHHHHHHHHHhCccCeEEEEEcCCC-CCc---cccccCch-------------hhccCCCHHHHHHHHHHHhCC
Confidence 9999999998887644 589999999983 111 11111000 001235689999999988865
Q ss_pred C--CCCceEEEeCC-----------------CCCCHHHHHHHHHHHhcC
Q 017914 268 P--SAWNVYNVVDD-----------------DPAPREEVFAYAWDLVEK 297 (364)
Q Consensus 268 ~--~~g~~~~i~~~-----------------~~~s~~el~~~i~~~~g~ 297 (364)
. -.|+++.+.+| ..++..++.+.+.+....
T Consensus 532 ~~~itG~~~~vdGG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 580 (604)
T 2et6_A 532 DVPVTGETFEIGGGWIGNTRWQRAKGAVSHDEHTTVEFIKEHLNEITDF 580 (604)
T ss_dssp TCCCCSCEEEEETTEEEEEEEEECCCEECCSSSCCHHHHHHHHHHHTCC
T ss_pred ccCCCCcEEEECCCeeEeeeeeccccccCCCCCCCHHHHHHHHHHHhcc
Confidence 4 24778877665 235667777666665543
|
| >3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi} | Back alignment and structure |
|---|
Probab=99.17 E-value=9.9e-11 Score=88.36 Aligned_cols=95 Identities=12% Similarity=0.148 Sum_probs=77.2
Q ss_pred CCCeEEEEcCChhhHHHHHHHHhCC-CEEEEEEeCchhhhhhhhCCceEEEccCChhhH--HhhccCceeeEEEEecCCC
Q 017914 58 SPNRMLILGMGFVGRIFAEKIKNQG-WVVSGTCTNVMKKKELEQSGFDVHLFNANETAL--MILTTLKNYTHLLVSIPPL 134 (364)
Q Consensus 58 ~~~~vlVtGtG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~--~~~~~~d~v~~~~~~~~~~ 134 (364)
++|+|+|+|.|++|+.+++.|.+.| ++|++++|++++...+...++.++.+|+.+.+. ..+.++|.|++++..
T Consensus 4 ~~~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~~~~---- 79 (118)
T 3ic5_A 4 MRWNICVVGAGKIGQMIAALLKTSSNYSVTVADHDLAALAVLNRMGVATKQVDAKDEAGLAKALGGFDAVISAAPF---- 79 (118)
T ss_dssp TCEEEEEECCSHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHHTTTCEEEECCTTCHHHHHHHTTTCSEEEECSCG----
T ss_pred CcCeEEEECCCHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhCCCcEEEecCCCHHHHHHHHcCCCEEEECCCc----
Confidence 4579999999999999999999999 999999999888777766788999999998663 667889999998731
Q ss_pred CCCCChhhhHHHHHHHHhhcCCccEEEEEc
Q 017914 135 EGTGDPMLKHGELLRSTLMNGHLQWLGYLS 164 (364)
Q Consensus 135 ~~~~~~~~~~~~~l~~a~~~~~~~r~v~~S 164 (364)
....++..++.+.|++++.+.+
T Consensus 80 --------~~~~~~~~~~~~~g~~~~~~~~ 101 (118)
T 3ic5_A 80 --------FLTPIIAKAAKAAGAHYFDLTE 101 (118)
T ss_dssp --------GGHHHHHHHHHHTTCEEECCCS
T ss_pred --------hhhHHHHHHHHHhCCCEEEecC
Confidence 1246777788888887665433
|
| >2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A* | Back alignment and structure |
|---|
Probab=99.08 E-value=2.5e-09 Score=112.62 Aligned_cols=208 Identities=12% Similarity=-0.048 Sum_probs=126.0
Q ss_pred CCCCeEEEEc-CCh-hhHHHHHHHHhCCCEEEEEE-eCchhhhh----hh------hCCceEEEccCChhhH--Hhh---
Q 017914 57 QSPNRMLILG-MGF-VGRIFAEKIKNQGWVVSGTC-TNVMKKKE----LE------QSGFDVHLFNANETAL--MIL--- 118 (364)
Q Consensus 57 ~~~~~vlVtG-tG~-iG~~l~~~L~~~g~~V~~~~-r~~~~~~~----l~------~~~~~~~~~D~~~~~~--~~~--- 118 (364)
..++++|||| +|. ||.++++.|+++|++|++++ |+.+.... +. ...+.++.+|++|.+. ..+
T Consensus 673 l~gKvaLVTGASsGgIG~aIA~~La~~GA~Vvl~~~R~~~~l~~~~~eL~~~~~~~g~~v~~v~~DVsd~~sV~alv~~i 752 (1887)
T 2uv8_A 673 FKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALIEFI 752 (1887)
T ss_dssp CTTCEEEEESCCSSSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCCHHHHHHHHHHHHHHhhcCCCeEEEEEecCCCHHHHHHHHHHH
Confidence 4568999998 887 99999999999999999984 65544322 21 1246788999999663 111
Q ss_pred -c---------cCceeeEEEEecCCCCCCCC-------hhhhHHHHHH------HHhh------cCCccEEEEEccceee
Q 017914 119 -T---------TLKNYTHLLVSIPPLEGTGD-------PMLKHGELLR------STLM------NGHLQWLGYLSSTGVY 169 (364)
Q Consensus 119 -~---------~~d~v~~~~~~~~~~~~~~~-------~~~~~~~~l~------~a~~------~~~~~r~v~~Ss~~vy 169 (364)
+ .+|+++|+++.........+ .......|+. .+++ ..+..+||++||...+
T Consensus 753 ~~~~~~~G~G~~LDiLVNNAGi~~~~~~l~d~t~~~e~~~~v~~vNv~g~~~l~~a~~~lp~m~~~~~G~IVnISS~ag~ 832 (1887)
T 2uv8_A 753 YDTEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVILPMSPNHGT 832 (1887)
T ss_dssp HSCTTTTSCCCCCSEEEECCCCCCCSBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCCSCCEEEEEEECSCTTC
T ss_pred HHhccccccCCCCeEEEECCCcCCCCCChhhCCcchHHHHHHHHHHHHHHHHHHHHHHhhhhhhhCCCCEEEEEcChHhc
Confidence 1 47899998876433201111 1112223333 2221 1223589999986432
Q ss_pred cCCCCccccCCCCCCCCChhHHHHHHHHHH-HHHhhhhcC--CcEEEEEecceecCC--C--ChHHHHHHhcCccccccc
Q 017914 170 GHSGGAWVDEDYPANPTTELGRLRLSAEKG-WLNLGRDLG--ISAQVFRLGGIYGPG--R--SSVDTIIKQLPLSEGQKM 242 (364)
Q Consensus 170 ~~~~~~~~~E~~~~~~~~~Y~~sK~~~E~~-~~~~~~~~~--~~~~ilRp~~v~g~~--~--~~~~~~~~~~~~~~~~~~ 242 (364)
.. ....|+.+|...+.+ .+.+++..+ ++++.|.||++.+.+ . ..........
T Consensus 833 ~g-------------g~~aYaASKAAL~~Lttr~lA~ela~~IrVNaV~PG~V~tT~m~~~~~~~~~~~~~~-------- 891 (1887)
T 2uv8_A 833 FG-------------GDGMYSESKLSLETLFNRWHSESWANQLTVCGAIIGWTRGTGLMSANNIIAEGIEKM-------- 891 (1887)
T ss_dssp SS-------------CBTTHHHHHHHGGGHHHHHHHSSCTTTEEEEEEEECCEECC-----CCTTHHHHHTT--------
T ss_pred cC-------------CCchHHHHHHHHHHHHHHHHHHHhCCCeEEEEEEecccccccccccchhHHHHHHhc--------
Confidence 11 225799999999998 555444332 899999999997421 1 1111111110
Q ss_pred ccCCcccccccHHHHHHHHHHHccCC-C---CCceEEEe--CCCC--CCHHHHHHH
Q 017914 243 RRARQYTSRIHVDDICQVLSASIDKP-S---AWNVYNVV--DDDP--APREEVFAY 290 (364)
Q Consensus 243 ~~~~~~~~~i~v~Dva~~~~~~l~~~-~---~g~~~~i~--~~~~--~s~~el~~~ 290 (364)
+ .-+...+|+|++++.++... . .|+.+.+. +|.. ..+.++...
T Consensus 892 --p---lr~~sPEEVA~avlfLaSd~~as~iTGq~I~VDVDGG~~~~~~l~el~~~ 942 (1887)
T 2uv8_A 892 --G---VRTFSQKEMAFNLLGLLTPEVVELCQKSPVMADLNGGLQFVPELKEFTAK 942 (1887)
T ss_dssp --S---CCCEEHHHHHHHHHGGGSHHHHHHHHHSCEEEEESCSTTTSSSHHHHHHH
T ss_pred --C---CCCCCHHHHHHHHHHHhCCCccccccCcEEEEECCCCeeccccHHHHHHH
Confidence 0 12247899999999988764 1 36777763 4432 345555443
|
| >2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} | Back alignment and structure |
|---|
Probab=99.06 E-value=6.5e-09 Score=100.53 Aligned_cols=212 Identities=10% Similarity=0.015 Sum_probs=128.9
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCc---------hhhh----hhhhCCceEEEccCChhh----H---
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNV---------MKKK----ELEQSGFDVHLFNANETA----L--- 115 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~---------~~~~----~l~~~~~~~~~~D~~~~~----~--- 115 (364)
..++.+|||| ++.||+++++.|+++|++|++.+|+. +..+ .+...+... ..|+.|.+ .
T Consensus 6 l~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~gr~~~~~~~~~~~i~~~g~~~-~~d~~d~~~~~~~v~~ 84 (604)
T 2et6_A 6 FKDKVVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIVKNGGVA-VADYNNVLDGDKIVET 84 (604)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECC-----------CHHHHHHHHHHHTTCEE-EEECCCTTCHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCccccccccchHHHHHHHHHHHhcCCeE-EEEcCCHHHHHHHHHH
Confidence 4567899999 89999999999999999999988754 2222 222223232 34666542 1
Q ss_pred --HhhccCceeeEEEEecCCCCCCCC----hhhhHHHHHH----------HHhhcCCccEEEEEccceeecCCCCccccC
Q 017914 116 --MILTTLKNYTHLLVSIPPLEGTGD----PMLKHGELLR----------STLMNGHLQWLGYLSSTGVYGHSGGAWVDE 179 (364)
Q Consensus 116 --~~~~~~d~v~~~~~~~~~~~~~~~----~~~~~~~~l~----------~a~~~~~~~r~v~~Ss~~vy~~~~~~~~~E 179 (364)
+.+..+|+++|.++......-..- .......|+. ..+++.+-.++|++||...+-...
T Consensus 85 ~~~~~G~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~a~~p~m~~~~~G~IVnisS~ag~~~~~------ 158 (604)
T 2et6_A 85 AVKNFGTVHVIINNAGILRDASMKKMTEKDYKLVIDVHLNGAFAVTKAAWPYFQKQKYGRIVNTSSPAGLYGNF------ 158 (604)
T ss_dssp HHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCT------
T ss_pred HHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCHHHcCCCC------
Confidence 223568999998875432111111 1111222322 223334456999999864321111
Q ss_pred CCCCCCCChhHHHHHHHHHHHHHhhhh---cCCcEEEEEecceecCCCChHHHHHHhcCcccccccccCCcccccccHHH
Q 017914 180 DYPANPTTELGRLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRSSVDTIIKQLPLSEGQKMRRARQYTSRIHVDD 256 (364)
Q Consensus 180 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D 256 (364)
....|+.+|...+.+.+.++.+ +|++++.|.|+. . .. +.... .. . ........+|
T Consensus 159 -----~~~~Y~asKaal~~lt~~la~El~~~gIrVn~v~Pg~----~-T~---m~~~~-~~--~------~~~~~~~pe~ 216 (604)
T 2et6_A 159 -----GQANYASAKSALLGFAETLAKEGAKYNIKANAIAPLA----R-SR---MTESI-MP--P------PMLEKLGPEK 216 (604)
T ss_dssp -----TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECC----C-CH---HHHTT-SC--H------HHHTTCSHHH
T ss_pred -----CchHHHHHHHHHHHHHHHHHHHhCccCeEEEEEccCC----c-Cc---ccccc-CC--h------hhhccCCHHH
Confidence 2257999999999999888654 589999999962 1 11 11110 00 0 0112357899
Q ss_pred HHHHHHHHccCCC--CCceEEEeCC------------------CCCCHHHHHHHHHHHhcC
Q 017914 257 ICQVLSASIDKPS--AWNVYNVVDD------------------DPAPREEVFAYAWDLVEK 297 (364)
Q Consensus 257 va~~~~~~l~~~~--~g~~~~i~~~------------------~~~s~~el~~~i~~~~g~ 297 (364)
+|.+++.++.... .|+++.+.+| ...+..++.+.+.+....
T Consensus 217 vA~~v~~L~s~~~~itG~~~~vdgG~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 277 (604)
T 2et6_A 217 VAPLVLYLSSAENELTGQFFEVAAGFYAQIRWERSGGVLFKPDQSFTAEVVAKRFSEILDY 277 (604)
T ss_dssp HHHHHHHHTSSSCCCCSCEEEEETTEEEEEEEEECCCEECCSSTTCCHHHHHHHHHHHTCC
T ss_pred HHHHHHHHhCCcccCCCCEEEECCCeEEEEEEEeccceecCCCCCCCHHHHHHHHHHhhch
Confidence 9999999987652 3777777654 346778888877776543
|
| >2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A* | Back alignment and structure |
|---|
Probab=99.04 E-value=7e-09 Score=109.06 Aligned_cols=209 Identities=11% Similarity=-0.077 Sum_probs=126.9
Q ss_pred CCCCeEEEEc-CCh-hhHHHHHHHHhCCCEEEEEE-eCchhhh----hh----h--hCCceEEEccCChhhH--Hhh---
Q 017914 57 QSPNRMLILG-MGF-VGRIFAEKIKNQGWVVSGTC-TNVMKKK----EL----E--QSGFDVHLFNANETAL--MIL--- 118 (364)
Q Consensus 57 ~~~~~vlVtG-tG~-iG~~l~~~L~~~g~~V~~~~-r~~~~~~----~l----~--~~~~~~~~~D~~~~~~--~~~--- 118 (364)
..+++||||| +|. ||.++++.|+++|++|++++ |+.+... .+ . ...+.++.+|++|.+. ..+
T Consensus 650 L~gKvaLVTGASgGgIG~aIAr~LA~~GA~VVl~~~R~~~~l~~~a~eL~~el~~~G~~v~~v~~DVsd~esV~alv~~i 729 (1878)
T 2uv9_A 650 FQGKHALMTGAGAGSIGAEVLQGLLSGGAKVIVTTSRFSRQVTEYYQGIYARCGARGSQLVVVPFNQGSKQDVEALVNYI 729 (1878)
T ss_dssp CTTCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCChHHHHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHHH
Confidence 4568999998 888 99999999999999999986 5443321 11 1 1246788999999763 211
Q ss_pred --c------cCceeeEEEEecCCC-C--CCC----ChhhhHHHHHHHHh------------hcCCccEEEEEccceeecC
Q 017914 119 --T------TLKNYTHLLVSIPPL-E--GTG----DPMLKHGELLRSTL------------MNGHLQWLGYLSSTGVYGH 171 (364)
Q Consensus 119 --~------~~d~v~~~~~~~~~~-~--~~~----~~~~~~~~~l~~a~------------~~~~~~r~v~~Ss~~vy~~ 171 (364)
. .+|+++|+++..... . ... +.......|+.... ...+..+||++||...+..
T Consensus 730 ~~~~~~~G~~IDiLVnNAGi~~~~~~l~d~t~~~e~~~~vl~vNv~g~~~l~~a~~~lp~M~~~~~G~IVnISS~ag~~g 809 (1878)
T 2uv9_A 730 YDTKNGLGWDLDYVVPFAAIPENGREIDSIDSKSELAHRIMLTNLLRLLGAIKTQKKERGYETRPAQVILPLSPNHGTFG 809 (1878)
T ss_dssp HCSSSSCCCCCSEEEECCCCCCTTCCTTCCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCSCCEEECCEECSCSSSSS
T ss_pred HHhhcccCCCCcEEEeCcccccCCCChhhcCcCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhCCCCEEEEEcchhhccC
Confidence 1 479999999865432 1 111 01112223433221 1223468999998643211
Q ss_pred CCCccccCCCCCCCCChhHHHHHHHHHHHHHhhhh---cCCcEEEEEeccee-cCCCChH---HHHHHhcCccccccccc
Q 017914 172 SGGAWVDEDYPANPTTELGRLRLSAEKGWLNLGRD---LGISAQVFRLGGIY-GPGRSSV---DTIIKQLPLSEGQKMRR 244 (364)
Q Consensus 172 ~~~~~~~E~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~-g~~~~~~---~~~~~~~~~~~~~~~~~ 244 (364)
....|+.+|...+.+...+... .+++++.|.||++- .+..... ...... .
T Consensus 810 -------------g~~aYaASKAAL~aLt~~laAeEla~~IrVNaVaPG~V~gT~m~~~~~~~~~~~~~--~-------- 866 (1878)
T 2uv9_A 810 -------------NDGLYSESKLALETLFNRWYSESWGNYLTICGAVIGWTRGTGLMSANNLVAEGVEK--L-------- 866 (1878)
T ss_dssp -------------CCSSHHHHHHHHTTHHHHHHHSTTTTTEEEEEEEECCBCCTTSCSHHHHTHHHHHT--T--------
T ss_pred -------------CchHHHHHHHHHHHHHHHHHHHHcCCCeEEEEEEecceecCcccccchhhHHHHHh--c--------
Confidence 1257999999999987654322 13899999999886 3321110 111111 0
Q ss_pred CCcccccccHHHHHHHHHHHccCCC----CCceEEEe--CCC--CCCHHHHHHHH
Q 017914 245 ARQYTSRIHVDDICQVLSASIDKPS----AWNVYNVV--DDD--PAPREEVFAYA 291 (364)
Q Consensus 245 ~~~~~~~i~v~Dva~~~~~~l~~~~----~g~~~~i~--~~~--~~s~~el~~~i 291 (364)
+ .-+...+|+|++++.++.... .|+.+.+. +|. ...+.++...+
T Consensus 867 p---lr~~sPeEVA~avlfLaSd~a~s~iTGq~I~VDVDGG~~~~~~l~el~~~l 918 (1878)
T 2uv9_A 867 G---VRTFSQQEMAFNLLGLMAPAIVNLCQSDPVFADLNGGLQFIPDLKGLMTKL 918 (1878)
T ss_dssp T---CCCBCHHHHHHHHHHHHSHHHHHHHTTSCEEEEESCSGGGCTTHHHHHHHH
T ss_pred C---CCCCCHHHHHHHHHHHhCCcccccccCcEEEEEcCCCccccCCHHHHHHHH
Confidence 0 012478999999998886543 37777763 442 25566665443
|
| >2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=98.93 E-value=2.8e-09 Score=108.95 Aligned_cols=211 Identities=12% Similarity=-0.053 Sum_probs=123.2
Q ss_pred CCCCeEEEEc-CCh-hhHHHHHHHHhCCCEEEEE-EeCchhhhh----hh------hCCceEEEccCChhhH--Hhh---
Q 017914 57 QSPNRMLILG-MGF-VGRIFAEKIKNQGWVVSGT-CTNVMKKKE----LE------QSGFDVHLFNANETAL--MIL--- 118 (364)
Q Consensus 57 ~~~~~vlVtG-tG~-iG~~l~~~L~~~g~~V~~~-~r~~~~~~~----l~------~~~~~~~~~D~~~~~~--~~~--- 118 (364)
..+++||||| +|. ||+++++.|+++|++|+++ .|+.+.... +. ...+.++.+|++|.+. ..+
T Consensus 474 L~GKvALVTGASgGGIGrAIAr~LA~~GA~VVL~~~R~~e~lee~a~eL~ael~a~Ga~V~vV~~DVTD~esVeaLVe~I 553 (1688)
T 2pff_A 474 FKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALIEFI 553 (1688)
T ss_dssp CCSCCEEECSCSSSSTHHHHHHHHHHHTCEEEEEESSCSTTTTTHHHHTTTTTCCTTCEEEEEECCSSSTTHHHHHHHHH
T ss_pred cCCCEEEEECCChHHHHHHHHHHHHHCcCEEEEEeCCCHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCCHHHHHHHHHHH
Confidence 3457899998 887 9999999999999999998 455443322 21 1246788999999663 211
Q ss_pred --c--------cCceeeEEEEecCCCCCCCC-h------hhhHHHHHH------HHh------hcCCccEEEEEccceee
Q 017914 119 --T--------TLKNYTHLLVSIPPLEGTGD-P------MLKHGELLR------STL------MNGHLQWLGYLSSTGVY 169 (364)
Q Consensus 119 --~--------~~d~v~~~~~~~~~~~~~~~-~------~~~~~~~l~------~a~------~~~~~~r~v~~Ss~~vy 169 (364)
. .+|+++|+|+.........+ . ......|+. .++ ++.+..+||++||...+
T Consensus 554 ~e~~~~~GfG~~IDILVNNAGI~~~g~~l~dlt~s~Ed~~rv~~VNL~G~~~Ltqaa~~lp~M~krggGrIVnISSiAG~ 633 (1688)
T 2pff_A 554 YDTEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVILPMSPNHGT 633 (1688)
T ss_dssp HSCTTSSSCCCCCCEEECCCCCCCCSBCSSSCTTHHHHHHHHTTHHHHHHHHHHHHHHHHHTCTTSCEEECCCCCSCTTT
T ss_pred HHhccccccCCCCeEEEECCCcCCCCCChhhCCCCHHHHHHHHHHHHHHHHHHHHHHHhChHHHhCCCCEEEEEEChHhc
Confidence 1 47999999876433201111 1 111222333 222 12233589999986422
Q ss_pred cCCCCccccCCCCCCCCChhHHHHHHHHHH-HHHhhhhcC--CcEEEEEecceecCC-CChHHHHHHhcCcccccccccC
Q 017914 170 GHSGGAWVDEDYPANPTTELGRLRLSAEKG-WLNLGRDLG--ISAQVFRLGGIYGPG-RSSVDTIIKQLPLSEGQKMRRA 245 (364)
Q Consensus 170 ~~~~~~~~~E~~~~~~~~~Y~~sK~~~E~~-~~~~~~~~~--~~~~ilRp~~v~g~~-~~~~~~~~~~~~~~~~~~~~~~ 245 (364)
.. ....|+.+|...+.+ .+.+++..+ ++++.|.||.+.+.+ ... ...... ...
T Consensus 634 ~G-------------g~saYaASKAAL~aLttrsLAeEla~~IRVNaVaPG~V~TT~M~~~------~e~~~~--~l~-- 690 (1688)
T 2pff_A 634 FG-------------GDGMYSESKLSLETLFNRWHSESWANQLTVCGAIIGWTRGTGLMSA------NNIIAE--GIE-- 690 (1688)
T ss_dssp SS-------------CBTTHHHHHHHHTHHHHHTTTSSCTTTEECCCCCCCCCCCCSSSCT------TTTCST--TTS--
T ss_pred cC-------------CchHHHHHHHHHHHHHHHHHHHHcCCCeEEEEEEECcCcCCcccCC------chHHHH--HHH--
Confidence 11 225799999999998 443443322 888899999887421 100 000000 000
Q ss_pred CcccccccHHHHHHHHHHHccCCC----CCceEEEe--CCC--CCCHHHHHHH
Q 017914 246 RQYTSRIHVDDICQVLSASIDKPS----AWNVYNVV--DDD--PAPREEVFAY 290 (364)
Q Consensus 246 ~~~~~~i~v~Dva~~~~~~l~~~~----~g~~~~i~--~~~--~~s~~el~~~ 290 (364)
.....+...+|+|++++.++.... .|+.+.+. +|. ...+.++...
T Consensus 691 ~iplR~~sPEEVA~aIlFLaSd~sAs~ITGq~I~VDVDGG~~~~~dl~ella~ 743 (1688)
T 2pff_A 691 KMGVRTFSQKEMAFNLLGLLTPEVVELCQKSPVMADLNGGLQFVPELKEFTAK 743 (1688)
T ss_dssp SSSCCCCCCCTTHHHHHHHTSTTHHHHHTTSCCCCCCSCSGGGSSSHHHHHHH
T ss_pred hCCCCCCCHHHHHHHHHHHhCCCccccccCcEEEEEcCCCeeecCCHHHHHHH
Confidence 000123478999999999987651 37666653 442 2345555443
|
| >3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa} | Back alignment and structure |
|---|
Probab=98.90 E-value=2e-08 Score=100.06 Aligned_cols=190 Identities=13% Similarity=0.077 Sum_probs=119.0
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHH-hCCC-EEEEEEeCchhhh-------hhhh--CCceEEEccCChhhH--Hhhc---
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIK-NQGW-VVSGTCTNVMKKK-------ELEQ--SGFDVHLFNANETAL--MILT--- 119 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~-~~g~-~V~~~~r~~~~~~-------~l~~--~~~~~~~~D~~~~~~--~~~~--- 119 (364)
..++++|||| +|.||+.+++.|. ++|. .|++++|+....+ .+.. ..+.++.+|++|.+. ..++
T Consensus 528 ~~~~~~lItGg~~GlG~aiA~~la~~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~G~~v~~~~~Dvsd~~~v~~~~~~~~ 607 (795)
T 3slk_A 528 DAAGTVLVTGGTGALGAEVARHLVIERGVRNLVLVSRRGPAASGAAELVAQLTAYGAEVSLQACDVADRETLAKVLASIP 607 (795)
T ss_dssp CTTSEEEEETTTSHHHHHHHHHHHHTSSCCEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSC
T ss_pred ccccceeeccCCCCcHHHHHHHHHHHcCCcEEEEeccCccchHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHH
Confidence 3568999998 9999999999999 7898 5999999843322 2222 346788999999764 2222
Q ss_pred ---cCceeeEEEEecCCCCCCCC----------hhhhHHHHHHHHhhcCCccEEEEEccceeecCCCCccccCCCCCCCC
Q 017914 120 ---TLKNYTHLLVSIPPLEGTGD----------PMLKHGELLRSTLMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANPT 186 (364)
Q Consensus 120 ---~~d~v~~~~~~~~~~~~~~~----------~~~~~~~~l~~a~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~ 186 (364)
.+|+++|+++.........- .......|+..++. ... +||++||...+-... ..
T Consensus 608 ~~~~id~lVnnAGv~~~~~~~~~t~e~~~~~~~~nv~G~~~l~~~~~-~~l-~iV~~SS~ag~~g~~-----------g~ 674 (795)
T 3slk_A 608 DEHPLTAVVHAAGVLDDGVSESLTVERLDQVLRPKVDGARNLLELID-PDV-ALVLFSSVSGVLGSG-----------GQ 674 (795)
T ss_dssp TTSCEEEEEECCCCCCCCCGGGCCHHHHHHHHCCCCCHHHHHHHHSC-TTS-EEEEEEETHHHHTCS-----------SC
T ss_pred HhCCCEEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHh-hCC-EEEEEccHHhcCCCC-----------CC
Confidence 46888888876543211110 11122345555552 233 899999865332211 23
Q ss_pred ChhHHHHHHHHHHHHHhhhhcCCcEEEEEecceecCCCChHHHHHHh--cCcccccccccCCcccccccHHHHHHHHHHH
Q 017914 187 TELGRLRLSAEKGWLNLGRDLGISAQVFRLGGIYGPGRSSVDTIIKQ--LPLSEGQKMRRARQYTSRIHVDDICQVLSAS 264 (364)
Q Consensus 187 ~~Y~~sK~~~E~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~ 264 (364)
..|+.+|...+.+.+++. ..|++++.|-||.+-..+ ....+... ..+.. .....+..+++...+..+
T Consensus 675 ~~YaAaka~~~alA~~~~-~~Gi~v~sI~pG~v~t~g--~~~~~~~~~~~~~~~--------~g~~~l~~~e~~~~~~~~ 743 (795)
T 3slk_A 675 GNYAAANSFLDALAQQRQ-SRGLPTRSLAWGPWAEHG--MASTLREAEQDRLAR--------SGLLPISTEEGLSQFDAA 743 (795)
T ss_dssp HHHHHHHHHHHHHHHHHH-HTTCCEEEEEECCCSCCC--HHHHHHHHHHHHHHH--------TTBCCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH-HcCCeEEEEECCeECcch--hhccccHHHHHHHHh--------cCCCCCCHHHHHHHHHHH
Confidence 579999998888887665 459999999999876443 21111110 00000 011226778888888888
Q ss_pred ccCCCC
Q 017914 265 IDKPSA 270 (364)
Q Consensus 265 l~~~~~ 270 (364)
+..+..
T Consensus 744 l~~~~~ 749 (795)
T 3slk_A 744 CGGAHT 749 (795)
T ss_dssp HTSSCS
T ss_pred HhCCCc
Confidence 876543
|
| >3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV} | Back alignment and structure |
|---|
Probab=98.86 E-value=1.3e-08 Score=92.69 Aligned_cols=158 Identities=15% Similarity=-0.001 Sum_probs=99.8
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHh-CCCEEEEEEeCchhhh----------------hhhhC--CceEEEccCChhhH-
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKN-QGWVVSGTCTNVMKKK----------------ELEQS--GFDVHLFNANETAL- 115 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~-~g~~V~~~~r~~~~~~----------------~l~~~--~~~~~~~D~~~~~~- 115 (364)
..+|++|||| ++.||+++++.|.+ .|++|++++|+.+... .+... .+..+.+|++|++.
T Consensus 59 ~~gKvaLVTGASsGIG~AiA~~LA~~~GA~Vv~~~r~~~~~~~~~~~ag~~n~~a~~~~~~~~G~~a~~i~~Dvtd~~~v 138 (422)
T 3s8m_A 59 DGPKKVLVIGASSGYGLASRITAAFGFGADTLGVFFEKPGTASKAGTAGWYNSAAFDKHAKAAGLYSKSINGDAFSDAAR 138 (422)
T ss_dssp SSCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTSHHHH
T ss_pred cCCCEEEEECCChHHHHHHHHHHHHhCCCEEEEEeCCchhhhhhhcccccchhHHHHHHHHhcCCcEEEEEecCCCHHHH
Confidence 3578999999 89999999999999 9999999998754322 12222 46778999999763
Q ss_pred --------Hhh-ccCceeeEEEEec------------CCCCCCC---------------------C-hhhhH--H--H--
Q 017914 116 --------MIL-TTLKNYTHLLVSI------------PPLEGTG---------------------D-PMLKH--G--E-- 146 (364)
Q Consensus 116 --------~~~-~~~d~v~~~~~~~------------~~~~~~~---------------------~-~~~~~--~--~-- 146 (364)
..+ ..+|+++|.++.. ....... + ...++ . .
T Consensus 139 ~~~v~~i~~~~~G~IDiLVNNAG~~~r~~p~~G~~~~~~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~v~Vn~ 218 (422)
T 3s8m_A 139 AQVIELIKTEMGGQVDLVVYSLASPVRKLPGSGEVKRSALKPIGQTYTATAIDTNKDTIIQASIEPASAQEIEDTITVMG 218 (422)
T ss_dssp HHHHHHHHHHSCSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHHHHHS
T ss_pred HHHHHHHHHHcCCCCCEEEEcCccccccccccccccccccccccccccccccccccccccccccCCCCHHHHHHHHHhhc
Confidence 122 3568888877541 0111110 0 00111 0 1
Q ss_pred -----HHHHHhhcC----CccEEEEEccceeecCCCCccccCCCCCCCCChhHHHHHHHHHHHHHhhhh---cCCcEEEE
Q 017914 147 -----LLRSTLMNG----HLQWLGYLSSTGVYGHSGGAWVDEDYPANPTTELGRLRLSAEKGWLNLGRD---LGISAQVF 214 (364)
Q Consensus 147 -----~l~~a~~~~----~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~il 214 (364)
.+..++... +-.++|.+||.+..-. .+ ......|+.+|...+.+.+.++.+ .|+++++|
T Consensus 219 ~~~~~~~~~a~~~~~m~~~gG~IVniSSi~g~~~---~p------~~~~~aY~ASKaAl~~lTrsLA~Ela~~GIRVNaV 289 (422)
T 3s8m_A 219 GQDWELWIDALEGAGVLADGARSVAFSYIGTEIT---WP------IYWHGALGKAKVDLDRTAQRLNARLAKHGGGANVA 289 (422)
T ss_dssp SHHHHHHHHHHHHTTCEEEEEEEEEEEECCCGGG---HH------HHTSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEE
T ss_pred hhHHHHHHHHHHHHHHhhCCCEEEEEeCchhhcc---CC------CccchHHHHHHHHHHHHHHHHHHHhCccCEEEEEE
Confidence 112222111 1247999998653210 00 001257999999999999888754 48999999
Q ss_pred EecceecCC
Q 017914 215 RLGGIYGPG 223 (364)
Q Consensus 215 Rp~~v~g~~ 223 (364)
.||.+-.+.
T Consensus 290 aPG~i~T~~ 298 (422)
T 3s8m_A 290 VLKSVVTQA 298 (422)
T ss_dssp EECCCCCTT
T ss_pred EcCCCcChh
Confidence 999987664
|
| >3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A* | Back alignment and structure |
|---|
Probab=98.83 E-value=6e-08 Score=87.51 Aligned_cols=157 Identities=13% Similarity=0.012 Sum_probs=99.2
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHh-CCCEEEEEEeCchhhh----------------hhhh--CCceEEEccCChhhH-
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKN-QGWVVSGTCTNVMKKK----------------ELEQ--SGFDVHLFNANETAL- 115 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~-~g~~V~~~~r~~~~~~----------------~l~~--~~~~~~~~D~~~~~~- 115 (364)
..++++|||| ++.||.++++.|++ .|++|++++|+.+... .+.. ..+..+.+|++|.+.
T Consensus 45 ~~gKvaLVTGas~GIG~AiA~~LA~g~GA~Vv~~~~~~~~~~~~~~~~gwyn~~~~~~~~~~~G~~a~~i~~Dvtd~~~v 124 (405)
T 3zu3_A 45 NGPKRVLVIGASTGYGLAARITAAFGCGADTLGVFFERPGEEGKPGTSGWYNSAAFHKFAAQKGLYAKSINGDAFSDEIK 124 (405)
T ss_dssp TCCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCBTTBCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTSHHHH
T ss_pred CCCCEEEEeCcchHHHHHHHHHHHHhcCCEEEEEeCCchhhhhhcccccchhHHHHHHHHHhcCCceEEEECCCCCHHHH
Confidence 4568999999 89999999999999 9999999988654321 1222 246778999999763
Q ss_pred -H-------hhccCceeeEEEEecC------------CCCCC---------------------CC-hhhhH----HH---
Q 017914 116 -M-------ILTTLKNYTHLLVSIP------------PLEGT---------------------GD-PMLKH----GE--- 146 (364)
Q Consensus 116 -~-------~~~~~d~v~~~~~~~~------------~~~~~---------------------~~-~~~~~----~~--- 146 (364)
. .+..+|+++|.++... ..... .+ ...++ ..
T Consensus 125 ~~~v~~i~~~~G~IDiLVNNAG~~~r~~p~tG~~~~s~~~pig~~~~~~~~d~~~~~~~~~~i~~~t~ee~~~~v~Vn~~ 204 (405)
T 3zu3_A 125 QLTIDAIKQDLGQVDQVIYSLASPRRTHPKTGEVFNSALKPIGNAVNLRGLDTDKEVIKESVLQPATQSEIDSTVAVMGG 204 (405)
T ss_dssp HHHHHHHHHHTSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHHHHHSS
T ss_pred HHHHHHHHHHcCCCCEEEEcCccccccCccccccccccccccccccccccccccccccccccCCCCCHHHHHHHHHhhch
Confidence 1 2245788888876420 00111 00 00111 01
Q ss_pred ----HHHHHhhc----CCccEEEEEccceeecCCCCccccCCCCCCCCChhHHHHHHHHHHHHHhhhh---c-CCcEEEE
Q 017914 147 ----LLRSTLMN----GHLQWLGYLSSTGVYGHSGGAWVDEDYPANPTTELGRLRLSAEKGWLNLGRD---L-GISAQVF 214 (364)
Q Consensus 147 ----~l~~a~~~----~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~-~~~~~il 214 (364)
.+..++.. .+-.++|.+||.+..-. .+......|+.+|...+.+.+.++.+ . |+++.++
T Consensus 205 ~~~~~~~~~~~~~~m~~~gG~IVniSSi~~~~~---------~p~~~~~aY~AaKaal~~ltrsLA~Ela~~~GIRVNaV 275 (405)
T 3zu3_A 205 EDWQMWIDALLDAGVLAEGAQTTAFTYLGEKIT---------HDIYWNGSIGAAKKDLDQKVLAIRESLAAHGGGDARVS 275 (405)
T ss_dssp HHHHHHHHHHHHHTCEEEEEEEEEEECCCCGGG---------TTTTTTSHHHHHHHHHHHHHHHHHHHHHTTTSCEEEEE
T ss_pred hHHHHHHHHHHHHhhhhCCcEEEEEeCchhhCc---------CCCccchHHHHHHHHHHHHHHHHHHHhCcccCeEEEEE
Confidence 11222111 11247999998653211 11111267999999999999888754 4 8999999
Q ss_pred EecceecC
Q 017914 215 RLGGIYGP 222 (364)
Q Consensus 215 Rp~~v~g~ 222 (364)
-||.+-.+
T Consensus 276 aPG~i~T~ 283 (405)
T 3zu3_A 276 VLKAVVSQ 283 (405)
T ss_dssp ECCCCCCH
T ss_pred EeCCCcCc
Confidence 99987654
|
| >3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=98.82 E-value=1.3e-08 Score=79.33 Aligned_cols=71 Identities=15% Similarity=0.176 Sum_probs=59.7
Q ss_pred CCCeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCChhhH-Hh--hccCceeeEEE
Q 017914 58 SPNRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETAL-MI--LTTLKNYTHLL 128 (364)
Q Consensus 58 ~~~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~-~~--~~~~d~v~~~~ 128 (364)
.+++|+|+|.|.+|+.+++.|.++|++|++++++++....+...++.++.+|.++++. .. +.++|.|+.+.
T Consensus 5 ~~~~v~I~G~G~iG~~la~~L~~~g~~V~~id~~~~~~~~~~~~~~~~~~gd~~~~~~l~~~~~~~~d~vi~~~ 78 (141)
T 3llv_A 5 GRYEYIVIGSEAAGVGLVRELTAAGKKVLAVDKSKEKIELLEDEGFDAVIADPTDESFYRSLDLEGVSAVLITG 78 (141)
T ss_dssp -CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTTCEEEECCTTCHHHHHHSCCTTCSEEEECC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHCCCcEEECCCCCHHHHHhCCcccCCEEEEec
Confidence 3578999999999999999999999999999999988877777889999999999874 22 35677777654
|
| >2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A* | Back alignment and structure |
|---|
Probab=98.77 E-value=3.7e-08 Score=76.79 Aligned_cols=98 Identities=12% Similarity=0.138 Sum_probs=71.8
Q ss_pred CCCeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCChhhH--Hh-hccCceeeEEEEecCCC
Q 017914 58 SPNRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETAL--MI-LTTLKNYTHLLVSIPPL 134 (364)
Q Consensus 58 ~~~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~--~~-~~~~d~v~~~~~~~~~~ 134 (364)
.+++|+|+|.|.+|+.+++.|.+.|++|++++|+++....+...+..++.+|.++.+. .. +.++|.|++++..
T Consensus 5 ~~~~v~I~G~G~iG~~~a~~l~~~g~~v~~~d~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~d~vi~~~~~---- 80 (144)
T 2hmt_A 5 KNKQFAVIGLGRFGGSIVKELHRMGHEVLAVDINEEKVNAYASYATHAVIANATEENELLSLGIRNFEYVIVAIGA---- 80 (144)
T ss_dssp -CCSEEEECCSHHHHHHHHHHHHTTCCCEEEESCHHHHHTTTTTCSEEEECCTTCHHHHHTTTGGGCSEEEECCCS----
T ss_pred cCCcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhCCEEEEeCCCCHHHHHhcCCCCCCEEEECCCC----
Confidence 4568999999999999999999999999999998877666655567788899988653 22 5778988887632
Q ss_pred CCCCChhhhHHHHHHHHhhcCCccEEEEEcc
Q 017914 135 EGTGDPMLKHGELLRSTLMNGHLQWLGYLSS 165 (364)
Q Consensus 135 ~~~~~~~~~~~~~l~~a~~~~~~~r~v~~Ss 165 (364)
+ ......+...++..+++++|..++
T Consensus 81 ----~--~~~~~~~~~~~~~~~~~~ii~~~~ 105 (144)
T 2hmt_A 81 ----N--IQASTLTTLLLKELDIPNIWVKAQ 105 (144)
T ss_dssp ----C--HHHHHHHHHHHHHTTCSEEEEECC
T ss_pred ----c--hHHHHHHHHHHHHcCCCeEEEEeC
Confidence 1 122234555566667777776554
|
| >4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A* | Back alignment and structure |
|---|
Probab=98.74 E-value=2.1e-07 Score=85.27 Aligned_cols=157 Identities=11% Similarity=0.017 Sum_probs=98.2
Q ss_pred CCCCeEEEEc-CChhhHH--HHHHHHhCCCEEEEEEeCchhh------------hhh----hh--CCceEEEccCChhhH
Q 017914 57 QSPNRMLILG-MGFVGRI--FAEKIKNQGWVVSGTCTNVMKK------------KEL----EQ--SGFDVHLFNANETAL 115 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~--l~~~L~~~g~~V~~~~r~~~~~------------~~l----~~--~~~~~~~~D~~~~~~ 115 (364)
..++++|||| ++.||.+ +++.|.++|++|++++|+.... ..+ .. ..+..+.+|++|.+.
T Consensus 58 ~~gK~aLVTGassGIG~A~aia~ala~~Ga~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvtd~~~ 137 (418)
T 4eue_A 58 RGPKKVLIVGASSGFGLATRISVAFGGPEAHTIGVSYETGATDRRIGTAGWYNNIFFKEFAKKKGLVAKNFIEDAFSNET 137 (418)
T ss_dssp CCCSEEEEESCSSHHHHHHHHHHHHSSSCCEEEEEECCCCCCSSCCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTCHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHHhCCCEEEEEecCcchhhhcccccccchHHHHHHHHHHcCCcEEEEEeeCCCHHH
Confidence 5678999999 8999999 9999999999999999864331 111 11 346788999999763
Q ss_pred --Hh-------hccCceeeEEEEecC------------CCCCCC---------------------C-hhhhH--HH----
Q 017914 116 --MI-------LTTLKNYTHLLVSIP------------PLEGTG---------------------D-PMLKH--GE---- 146 (364)
Q Consensus 116 --~~-------~~~~d~v~~~~~~~~------------~~~~~~---------------------~-~~~~~--~~---- 146 (364)
.. +..+|.++|.++... ...... + ...++ ..
T Consensus 138 v~~~v~~i~~~~G~IDiLVnNAG~~~r~~~~~g~~~~s~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~~~vn~ 217 (418)
T 4eue_A 138 KDKVIKYIKDEFGKIDLFVYSLAAPRRKDYKTGNVYTSRIKTILGDFEGPTIDVERDEITLKKVSSASIEEIEETRKVMG 217 (418)
T ss_dssp HHHHHHHHHHTTCCEEEEEECCCCSEEECTTTCCEEECCCCBSSSCEEEEEEETTTTEEEEEEECBCCHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHcCCCCEEEECCcccccccccccccccccccccccccccccccccccccccccccCCCHHHHHHHHHHhh
Confidence 11 235688888776420 000010 0 00011 11
Q ss_pred -----HHHHHhhc----CCccEEEEEccceeecCCCCccccCCCCCCCCChhHHHHHHHHHHHHHhhhh----cCCcEEE
Q 017914 147 -----LLRSTLMN----GHLQWLGYLSSTGVYGHSGGAWVDEDYPANPTTELGRLRLSAEKGWLNLGRD----LGISAQV 213 (364)
Q Consensus 147 -----~l~~a~~~----~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~~sK~~~E~~~~~~~~~----~~~~~~i 213 (364)
.+..++.. .+-.++|.+||.+..-. .+......|+.+|...+.+.+.++.+ .|+++.+
T Consensus 218 ~~~~~~~~~~l~~~~~~~~gg~IV~iSSi~~~~~---------~p~~~~~aY~ASKaAL~~ltrsLA~ELa~~~GIrVN~ 288 (418)
T 4eue_A 218 GEDWQEWCEELLYEDCFSDKATTIAYSYIGSPRT---------YKIYREGTIGIAKKDLEDKAKLINEKLNRVIGGRAFV 288 (418)
T ss_dssp SHHHHHHHHHHHHTTCEEEEEEEEEEECCCCGGG---------TTTTTTSHHHHHHHHHHHHHHHHHHHHHHHHSCEEEE
T ss_pred HHHHHHHHHHHHHHhhhcCCcEEEEEeCchhcCC---------CCccccHHHHHHHHHHHHHHHHHHHHhCCccCeEEEE
Confidence 11222211 11247899988642211 11112268999999999998888643 6899999
Q ss_pred EEecceecC
Q 017914 214 FRLGGIYGP 222 (364)
Q Consensus 214 lRp~~v~g~ 222 (364)
+.||.+-.+
T Consensus 289 V~PG~v~T~ 297 (418)
T 4eue_A 289 SVNKALVTK 297 (418)
T ss_dssp EECCCCCCH
T ss_pred EECCcCcCh
Confidence 999987653
|
| >1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9 | Back alignment and structure |
|---|
Probab=98.73 E-value=6.8e-08 Score=74.87 Aligned_cols=95 Identities=11% Similarity=-0.047 Sum_probs=69.5
Q ss_pred CCeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhh-CCceEEEccCChhhH---HhhccCceeeEEEEecCCC
Q 017914 59 PNRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQ-SGFDVHLFNANETAL---MILTTLKNYTHLLVSIPPL 134 (364)
Q Consensus 59 ~~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~-~~~~~~~~D~~~~~~---~~~~~~d~v~~~~~~~~~~ 134 (364)
+|+|+|+|.|.+|+.+++.|.+.|++|++++|+++....+.. .++.++.+|..+.+. ..+.++|.|+++..
T Consensus 4 ~m~i~IiG~G~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~d~vi~~~~----- 78 (140)
T 1lss_A 4 GMYIIIAGIGRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEIDALVINGDCTKIKTLEDAGIEDADMYIAVTG----- 78 (140)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCSSEEEESCTTSHHHHHHTTTTTCSEEEECCS-----
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHhcCcEEEEcCCCCHHHHHHcCcccCCEEEEeeC-----
Confidence 479999999999999999999999999999998877666653 377788899987663 22567898888752
Q ss_pred CCCCChhhhHHHHHHHHhhcCCccEEEEEc
Q 017914 135 EGTGDPMLKHGELLRSTLMNGHLQWLGYLS 164 (364)
Q Consensus 135 ~~~~~~~~~~~~~l~~a~~~~~~~r~v~~S 164 (364)
+. .....+...++..+.+++|..+
T Consensus 79 ----~~--~~~~~~~~~~~~~~~~~ii~~~ 102 (140)
T 1lss_A 79 ----KE--EVNLMSSLLAKSYGINKTIARI 102 (140)
T ss_dssp ----CH--HHHHHHHHHHHHTTCCCEEEEC
T ss_pred ----Cc--hHHHHHHHHHHHcCCCEEEEEe
Confidence 11 2223455556666666777543
|
| >2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A* | Back alignment and structure |
|---|
Probab=98.65 E-value=3.1e-07 Score=72.64 Aligned_cols=98 Identities=12% Similarity=-0.010 Sum_probs=70.9
Q ss_pred CCCCCeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCchhhhhhh-hCCceEEEccCChhhH--Hh-hccCceeeEEEEec
Q 017914 56 WQSPNRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELE-QSGFDVHLFNANETAL--MI-LTTLKNYTHLLVSI 131 (364)
Q Consensus 56 ~~~~~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~-~~~~~~~~~D~~~~~~--~~-~~~~d~v~~~~~~~ 131 (364)
...+++|+|+|.|.+|+.+++.|.+.|++|++++|++++...+. ..+..++.+|..+.+. .. +.++|.|+.+...
T Consensus 16 ~~~~~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~g~~~~~~d~~~~~~l~~~~~~~ad~Vi~~~~~- 94 (155)
T 2g1u_A 16 KQKSKYIVIFGCGRLGSLIANLASSSGHSVVVVDKNEYAFHRLNSEFSGFTVVGDAAEFETLKECGMEKADMVFAFTND- 94 (155)
T ss_dssp -CCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGGGGGGSCTTCCSEEEESCTTSHHHHHTTTGGGCSEEEECSSC-
T ss_pred ccCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHhcCCCcEEEecCCCHHHHHHcCcccCCEEEEEeCC-
Confidence 34568999999999999999999999999999999988877765 5677888899887653 22 5678888776531
Q ss_pred CCCCCCCChhhhHHHHHHHHhhc-CCccEEEEEc
Q 017914 132 PPLEGTGDPMLKHGELLRSTLMN-GHLQWLGYLS 164 (364)
Q Consensus 132 ~~~~~~~~~~~~~~~~l~~a~~~-~~~~r~v~~S 164 (364)
......+...++. .+..++|...
T Consensus 95 ----------~~~~~~~~~~~~~~~~~~~iv~~~ 118 (155)
T 2g1u_A 95 ----------DSTNFFISMNARYMFNVENVIARV 118 (155)
T ss_dssp ----------HHHHHHHHHHHHHTSCCSEEEEEC
T ss_pred ----------cHHHHHHHHHHHHHCCCCeEEEEE
Confidence 1223344445554 5666666544
|
| >1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A | Back alignment and structure |
|---|
Probab=98.54 E-value=5.7e-08 Score=86.80 Aligned_cols=162 Identities=9% Similarity=-0.003 Sum_probs=97.6
Q ss_pred CCeEEEEc-CChhhHHHHHHHHhCCC-------EEEEEEeC----chhhh----hhhhCCceEEEccCChh-hH-Hhhcc
Q 017914 59 PNRMLILG-MGFVGRIFAEKIKNQGW-------VVSGTCTN----VMKKK----ELEQSGFDVHLFNANET-AL-MILTT 120 (364)
Q Consensus 59 ~~~vlVtG-tG~iG~~l~~~L~~~g~-------~V~~~~r~----~~~~~----~l~~~~~~~~~~D~~~~-~~-~~~~~ 120 (364)
+|||+||| +|+||++++..|+.+|+ +|++++++ .++.. .+......+ ..|+... +. .++++
T Consensus 5 ~~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~~~~~~~~~~g~~~dl~~~~~~~-~~~i~~~~~~~~al~~ 83 (329)
T 1b8p_A 5 PMRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIPNEKAQKALQGVMMEIDDCAFPL-LAGMTAHADPMTAFKD 83 (329)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCSCHHHHHHHHHHHHHHHTTTCTT-EEEEEEESSHHHHTTT
T ss_pred CCEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCCCccccccchhhHHHHhhhcccc-cCcEEEecCcHHHhCC
Confidence 47999999 69999999999999885 89999887 33222 122211111 2344432 22 67899
Q ss_pred CceeeEEEEecCCCCCCCC----hhhhHHHHHHHHhhcCC-cc-EEEEEccceeecCCCCccccCCC-CCCCCChhHHHH
Q 017914 121 LKNYTHLLVSIPPLEGTGD----PMLKHGELLRSTLMNGH-LQ-WLGYLSSTGVYGHSGGAWVDEDY-PANPTTELGRLR 193 (364)
Q Consensus 121 ~d~v~~~~~~~~~~~~~~~----~~~~~~~~l~~a~~~~~-~~-r~v~~Ss~~vy~~~~~~~~~E~~-~~~~~~~Y~~sK 193 (364)
+|.|+|+++.......... .......++..++.+.+ .+ +||++|...-. .. ....+.. .+.+...++.++
T Consensus 84 aD~Vi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~~p~a~ii~~SNPv~~-~t--~~~~~~~~~~p~~~v~g~t~ 160 (329)
T 1b8p_A 84 ADVALLVGARPRGPGMERKDLLEANAQIFTVQGKAIDAVASRNIKVLVVGNPANT-NA--YIAMKSAPSLPAKNFTAMLR 160 (329)
T ss_dssp CSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHH-HH--HHHHHTCTTSCGGGEEECCH
T ss_pred CCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEccCchHH-HH--HHHHHHcCCCCHHHEEEeec
Confidence 9999999875332111111 11123456666776653 44 88888762100 00 0001111 112334577788
Q ss_pred HHHHHHHHHhhhhcCCcEEEEEecceecCCC
Q 017914 194 LSAEKGWLNLGRDLGISAQVFRLGGIYGPGR 224 (364)
Q Consensus 194 ~~~E~~~~~~~~~~~~~~~ilRp~~v~g~~~ 224 (364)
+...++...+++..|++..-++...++|.+.
T Consensus 161 Ld~~r~~~~la~~lgv~~~~v~~~~v~G~Hg 191 (329)
T 1b8p_A 161 LDHNRALSQIAAKTGKPVSSIEKLFVWGNHS 191 (329)
T ss_dssp HHHHHHHHHHHHHHTCCGGGEESCEEEBCSS
T ss_pred HHHHHHHHHHHHHhCcCHHHceEEEEEeccC
Confidence 7788888888888888877777666788653
|
| >3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12} | Back alignment and structure |
|---|
Probab=98.49 E-value=3.9e-07 Score=70.72 Aligned_cols=72 Identities=24% Similarity=0.248 Sum_probs=61.3
Q ss_pred CCCCeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCChhhH-H--hhccCceeeEEE
Q 017914 57 QSPNRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETAL-M--ILTTLKNYTHLL 128 (364)
Q Consensus 57 ~~~~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~-~--~~~~~d~v~~~~ 128 (364)
...++|+|+|.|.+|+.+++.|.+.|++|++++++++..+.+...++.++.+|.++++. . .+.++|.|+.+.
T Consensus 5 ~~~~~viIiG~G~~G~~la~~L~~~g~~v~vid~~~~~~~~~~~~g~~~i~gd~~~~~~l~~a~i~~ad~vi~~~ 79 (140)
T 3fwz_A 5 DICNHALLVGYGRVGSLLGEKLLASDIPLVVIETSRTRVDELRERGVRAVLGNAANEEIMQLAHLECAKWLILTI 79 (140)
T ss_dssp CCCSCEEEECCSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTTCEEEESCTTSHHHHHHTTGGGCSEEEECC
T ss_pred cCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHcCCCEEECCCCCHHHHHhcCcccCCEEEEEC
Confidence 34578999999999999999999999999999999998888877899999999999874 2 346777776654
|
| >1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9 | Back alignment and structure |
|---|
Probab=98.46 E-value=7.9e-07 Score=70.11 Aligned_cols=70 Identities=14% Similarity=0.130 Sum_probs=55.6
Q ss_pred CCeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCc-hhhhhhh---hCCceEEEccCChhhH--H-hhccCceeeEEE
Q 017914 59 PNRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNV-MKKKELE---QSGFDVHLFNANETAL--M-ILTTLKNYTHLL 128 (364)
Q Consensus 59 ~~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~-~~~~~l~---~~~~~~~~~D~~~~~~--~-~~~~~d~v~~~~ 128 (364)
.++|+|+|.|.+|+.+++.|.+.|++|+++++++ +..+.+. ..++.++.+|.++++. . .+.++|.|+.+.
T Consensus 3 ~~~vlI~G~G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~ 79 (153)
T 1id1_A 3 KDHFIVCGHSILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLGDNADVIPGDSNDSSVLKKAGIDRCRAILALS 79 (153)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHCTTCEEEESCTTSHHHHHHHTTTTCSEEEECS
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhhcCCCeEEEcCCCCHHHHHHcChhhCCEEEEec
Confidence 4689999999999999999999999999999974 4333332 3578999999999774 3 367788777665
|
| >3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633} | Back alignment and structure |
|---|
Probab=98.43 E-value=1.1e-06 Score=71.44 Aligned_cols=72 Identities=19% Similarity=0.236 Sum_probs=60.2
Q ss_pred CCCCeEEEEcCChhhHHHHHHHHhC-CCEEEEEEeCchhhhhhhhCCceEEEccCChhhH--Hh--hccCceeeEEE
Q 017914 57 QSPNRMLILGMGFVGRIFAEKIKNQ-GWVVSGTCTNVMKKKELEQSGFDVHLFNANETAL--MI--LTTLKNYTHLL 128 (364)
Q Consensus 57 ~~~~~vlVtGtG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~--~~--~~~~d~v~~~~ 128 (364)
..+++|+|+|.|.+|+.+++.|.+. |++|+++++++++...+.+.++.++.+|.++.+. .+ +.++|.|+.+.
T Consensus 37 ~~~~~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~~~~g~~~~~gd~~~~~~l~~~~~~~~ad~vi~~~ 113 (183)
T 3c85_A 37 PGHAQVLILGMGRIGTGAYDELRARYGKISLGIEIREEAAQQHRSEGRNVISGDATDPDFWERILDTGHVKLVLLAM 113 (183)
T ss_dssp CTTCSEEEECCSHHHHHHHHHHHHHHCSCEEEEESCHHHHHHHHHTTCCEEECCTTCHHHHHTBCSCCCCCEEEECC
T ss_pred CCCCcEEEECCCHHHHHHHHHHHhccCCeEEEEECCHHHHHHHHHCCCCEEEcCCCCHHHHHhccCCCCCCEEEEeC
Confidence 4467999999999999999999999 9999999999988777777788899999988764 33 56677777654
|
| >3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A* | Back alignment and structure |
|---|
Probab=98.39 E-value=5.6e-06 Score=92.00 Aligned_cols=212 Identities=11% Similarity=0.019 Sum_probs=121.4
Q ss_pred CCCCeEEEEc-CCh-hhHHHHHHHHhCCCEEEEEEeCchh-----hhhhh----h--CCceEEEccCChhhH--Hh----
Q 017914 57 QSPNRMLILG-MGF-VGRIFAEKIKNQGWVVSGTCTNVMK-----KKELE----Q--SGFDVHLFNANETAL--MI---- 117 (364)
Q Consensus 57 ~~~~~vlVtG-tG~-iG~~l~~~L~~~g~~V~~~~r~~~~-----~~~l~----~--~~~~~~~~D~~~~~~--~~---- 117 (364)
..+|++|||| ++. ||+++++.|++.|++|++.+|+.+. ...+. . ..+..+.+|++|.+. ..
T Consensus 2134 l~gKvaLVTGAs~GsIG~AiA~~La~~GA~Vvi~~r~~~~~~~~~~~~l~~~l~~~G~~~~~v~~Dvtd~~~v~~lv~~i 2213 (3089)
T 3zen_D 2134 XXDEVAVVTGASKGSIAASVVGQLLDGGATVIATTSRLDDDRLAFYKQLYRDHARFDATLWVVPANMASYSDIDKLVEWV 2213 (3089)
T ss_dssp CCCCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESCCSHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCCEEEEeCCChhHHHHHHHHHHHHCCCEEEEEeCChhhhhhHHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHHH
Confidence 5678999998 777 9999999999999999999997655 22221 1 235678899999663 11
Q ss_pred h-------ccCceeeEEEEe----cCCC---C--CCCChhhh----HHHHH----------HHHhhcCCcc---EEEEEc
Q 017914 118 L-------TTLKNYTHLLVS----IPPL---E--GTGDPMLK----HGELL----------RSTLMNGHLQ---WLGYLS 164 (364)
Q Consensus 118 ~-------~~~d~v~~~~~~----~~~~---~--~~~~~~~~----~~~~l----------~~a~~~~~~~---r~v~~S 164 (364)
. ..+|+++|+|+. .... . ...+.... ...|+ ...+...+.. .+|..+
T Consensus 2214 ~~~~~~~fG~IDILVNNAGi~d~~~~~a~~~~~~~~e~~~~~~e~~~~vnl~~~~~l~~~~~~~m~~~~~g~~~~ii~~~ 2293 (3089)
T 3zen_D 2214 GTEQTESLGPQSIHLKDAQTPTLLFPFAAPRVAGDMSEVGSRAEMEMKVLLWAVQRLISGLSKIGAERDIASRLHVVLPG 2293 (3089)
T ss_dssp TSCCEEEESSSEEEECCCCCCSEEEECCCCCCCCTTSCTTSHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCCEEEEEEE
T ss_pred HhhhhhhcCCCCEEEECCCcccccCcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCceeEEEEEC
Confidence 1 246888887765 1110 0 11111101 11111 1111222221 122222
Q ss_pred cceeecCCCCccccCCCCCCCCChhHHHHHHHHHHHHHhhhh--c--CCcEEEEEecceecCCC----ChHHHHHHhcCc
Q 017914 165 STGVYGHSGGAWVDEDYPANPTTELGRLRLSAEKGWLNLGRD--L--GISAQVFRLGGIYGPGR----SSVDTIIKQLPL 236 (364)
Q Consensus 165 s~~vy~~~~~~~~~E~~~~~~~~~Y~~sK~~~E~~~~~~~~~--~--~~~~~ilRp~~v~g~~~----~~~~~~~~~~~~ 236 (364)
|. ..+. ......|+.+|...+.+.+.++.+ . ++.++.+.||++-+... ......... .
T Consensus 2294 ss-~~g~-----------~g~~~aYsASKaAl~~LtrslA~E~~~a~~IrVn~v~PG~v~tT~l~~~~~~~~~~~~~--~ 2359 (3089)
T 3zen_D 2294 SP-NRGM-----------FGGDGAYGEAKSALDALENRWSAEKSWAERVSLAHALIGWTKGTGLMGQNDAIVSAVEE--A 2359 (3089)
T ss_dssp CS-STTS-----------CSSCSSHHHHGGGHHHHHHHHHHCSTTTTTEEEEEEECCCEECSTTTTTTTTTHHHHGG--G
T ss_pred Cc-cccc-----------CCCchHHHHHHHHHHHHHHHHHhccccCCCeEEEEEeecccCCCcccccchhHHHHHHh--c
Confidence 11 1110 011246999999999999988766 2 57888999998864321 111111111 0
Q ss_pred ccccccccCCcccccccHHHHHHHHHHHccCCCC----Cce--EEEeCCC---CCCHHHHHHHHHH
Q 017914 237 SEGQKMRRARQYTSRIHVDDICQVLSASIDKPSA----WNV--YNVVDDD---PAPREEVFAYAWD 293 (364)
Q Consensus 237 ~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~~----g~~--~~i~~~~---~~s~~el~~~i~~ 293 (364)
+ ......+|+|.+++.++..... ++. .++.+|- ..++.++...+++
T Consensus 2360 --------~---~r~~~PeEIA~avlfLaS~~a~~~~~~~p~~vdl~GG~~~~~~~~~~~~~~~~~ 2414 (3089)
T 3zen_D 2360 --------G---VTTYTTDEMAAMLLDLCTVETKVAAAGAPVKVDLTGGLGDIKIDMAELAAKARE 2414 (3089)
T ss_dssp --------S---CBCEEHHHHHHHHHHTTSHHHHHHHHHSCEEEECSBSCSSCCCCHHHHTHHHHH
T ss_pred --------C---CCCCCHHHHHHHHHHHhChhhhhHhcCCeEEEEcCCCcCcCCCCHHHHHHHHHH
Confidence 0 0113689999999998864321 232 3444553 3688888876543
|
| >2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* | Back alignment and structure |
|---|
Probab=98.38 E-value=1.5e-06 Score=96.18 Aligned_cols=152 Identities=15% Similarity=0.117 Sum_probs=96.5
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCE-EEEEEeCchhhh-------hhhhC--CceEEEccCChhhH--Hh------
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWV-VSGTCTNVMKKK-------ELEQS--GFDVHLFNANETAL--MI------ 117 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~-V~~~~r~~~~~~-------~l~~~--~~~~~~~D~~~~~~--~~------ 117 (364)
..++++|||| +|.||+.+++.|.++|++ |++++|+..+.+ .+... .+.++.+|++|.+. ..
T Consensus 1882 ~~~k~~lITGgs~GIG~aia~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~ 1961 (2512)
T 2vz8_A 1882 PPHKSYVITGGLGGFGLQLAQWLRLRGAQKLVLTSRSGIRTGYQARQVREWRRQGVQVLVSTSNASSLDGARSLITEATQ 1961 (2512)
T ss_dssp CTTCEEEEESTTSHHHHHHHHHHHHTTCCEEEEECSSCCCSHHHHHHHHHHHHTTCEEEEECCCSSSHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCCHHHHHHHHHHHCCCCEEEEEeCCCcchHHHHHHHHHHHhCCCEEEEEecCCCCHHHHHHHHHHHHh
Confidence 3568999998 999999999999999996 777888754321 12222 45678899999663 21
Q ss_pred hccCceeeEEEEecCCCC--C--C------CChhhhHHHHHHHHhhc--CCccEEEEEccceeecCCCCccccCCCCCCC
Q 017914 118 LTTLKNYTHLLVSIPPLE--G--T------GDPMLKHGELLRSTLMN--GHLQWLGYLSSTGVYGHSGGAWVDEDYPANP 185 (364)
Q Consensus 118 ~~~~d~v~~~~~~~~~~~--~--~------~~~~~~~~~~l~~a~~~--~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~ 185 (364)
+..+|+++|+|+...... . . -+.......++..++.. ....+||++||....-... .
T Consensus 1962 ~g~id~lVnnAgv~~~~~~~~~t~e~~~~~~~~nv~g~~~l~~~~~~~~~~~g~iV~iSS~ag~~g~~-----------g 2030 (2512)
T 2vz8_A 1962 LGPVGGVFNLAMVLRDAVLENQTPEFFQDVSKPKYSGTANLDRVTREACPELDYFVIFSSVSCGRGNA-----------G 2030 (2512)
T ss_dssp HSCEEEEEECCCC----------------CTTTTHHHHHHHHHHHHHHCTTCCEEEEECCHHHHTTCT-----------T
T ss_pred cCCCcEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHhcccCCEEEEecchhhcCCCC-----------C
Confidence 235799999887543211 0 0 11122222343333321 1236899999865321111 2
Q ss_pred CChhHHHHHHHHHHHHHhhhhcCCcEEEEEeccee
Q 017914 186 TTELGRLRLSAEKGWLNLGRDLGISAQVFRLGGIY 220 (364)
Q Consensus 186 ~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilRp~~v~ 220 (364)
...|+.+|...+.+.+... ..|++...+..|.+-
T Consensus 2031 ~~~Y~aaKaal~~l~~~rr-~~Gl~~~a~~~g~~~ 2064 (2512)
T 2vz8_A 2031 QANYGFANSAMERICEKRR-HDGLPGLAVQWGAIG 2064 (2512)
T ss_dssp CHHHHHHHHHHHHHHHHHH-HTTSCCCEEEECCBC
T ss_pred cHHHHHHHHHHHHHHHHHH-HCCCcEEEEEccCcC
Confidence 3579999999999997554 448888888887653
|
| >3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=98.36 E-value=1.7e-06 Score=72.51 Aligned_cols=69 Identities=9% Similarity=0.023 Sum_probs=58.0
Q ss_pred CeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhh-CCceEEEccCChhhH---HhhccCceeeEEE
Q 017914 60 NRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQ-SGFDVHLFNANETAL---MILTTLKNYTHLL 128 (364)
Q Consensus 60 ~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~-~~~~~~~~D~~~~~~---~~~~~~d~v~~~~ 128 (364)
|+|+|+|.|.+|+++++.|.++|++|++++++++....+.+ .++.++.+|.++.+. ..+.++|.|+.+.
T Consensus 1 M~iiIiG~G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~ 73 (218)
T 3l4b_C 1 MKVIIIGGETTAYYLARSMLSRKYGVVIINKDRELCEEFAKKLKATIIHGDGSHKEILRDAEVSKNDVVVILT 73 (218)
T ss_dssp CCEEEECCHHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHHSSSEEEESCTTSHHHHHHHTCCTTCEEEECC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHcCCeEEEcCCCCHHHHHhcCcccCCEEEEec
Confidence 68999999999999999999999999999999888776543 578999999999774 2357788777654
|
| >1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A | Back alignment and structure |
|---|
Probab=98.35 E-value=8.6e-07 Score=82.52 Aligned_cols=73 Identities=22% Similarity=0.312 Sum_probs=59.8
Q ss_pred CCCeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhh--CCceEEEccCChhh-H-HhhccCceeeEEEEe
Q 017914 58 SPNRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQ--SGFDVHLFNANETA-L-MILTTLKNYTHLLVS 130 (364)
Q Consensus 58 ~~~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~--~~~~~~~~D~~~~~-~-~~~~~~d~v~~~~~~ 130 (364)
.+++|+|+|+|++|+++++.|++.|++|++.+|+.++...+.. .++..+.+|++|.+ . ..+.++|+|+|++..
T Consensus 2 ~~k~VlViGaG~iG~~ia~~L~~~G~~V~v~~R~~~~a~~la~~~~~~~~~~~Dv~d~~~l~~~l~~~DvVIn~a~~ 78 (450)
T 1ff9_A 2 ATKSVLMLGSGFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGVQHSTPISLDVNDDAALDAEVAKHDLVISLIPY 78 (450)
T ss_dssp CCCEEEEECCSTTHHHHHHHHHTTTCEEEEEESSHHHHHHTTTTCTTEEEEECCTTCHHHHHHHHTTSSEEEECCC-
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCcCEEEEEECCHHHHHHHHHhcCCceEEEeecCCHHHHHHHHcCCcEEEECCcc
Confidence 3578999999999999999999999999999999877665543 24678889999865 3 667889999998864
|
| >1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A* | Back alignment and structure |
|---|
Probab=98.34 E-value=7.5e-07 Score=78.08 Aligned_cols=73 Identities=14% Similarity=0.033 Sum_probs=59.5
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhh-----CCceEEEccCChhhH--HhhccCceeeEEE
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQ-----SGFDVHLFNANETAL--MILTTLKNYTHLL 128 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~-----~~~~~~~~D~~~~~~--~~~~~~d~v~~~~ 128 (364)
..++++|||| +|.+|++++..|++.|++|++++|+.++.+.+.+ .++.++.+|+++.+. ..++.+|.|+|++
T Consensus 117 l~gk~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~~~~~~~l~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~DvlVn~a 196 (287)
T 1lu9_A 117 VKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFKVNVTAAETADDASRAEAVKGAHFVFTAG 196 (287)
T ss_dssp CTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHTCCCEEEECCSHHHHHHHTTTCSEEEECC
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHhCCEEEECC
Confidence 4568999999 9999999999999999999999998776554321 256778899998653 5667889999988
Q ss_pred E
Q 017914 129 V 129 (364)
Q Consensus 129 ~ 129 (364)
+
T Consensus 197 g 197 (287)
T 1lu9_A 197 A 197 (287)
T ss_dssp C
T ss_pred C
Confidence 5
|
| >1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A | Back alignment and structure |
|---|
Probab=98.27 E-value=3e-06 Score=75.44 Aligned_cols=107 Identities=16% Similarity=-0.059 Sum_probs=67.9
Q ss_pred CCCeEEEEc-CChhhHHHHHHHHhCC--CEEEEEEeCchhh--hhhhhCCce-EEEccCCh-hhH-HhhccCceeeEEEE
Q 017914 58 SPNRMLILG-MGFVGRIFAEKIKNQG--WVVSGTCTNVMKK--KELEQSGFD-VHLFNANE-TAL-MILTTLKNYTHLLV 129 (364)
Q Consensus 58 ~~~~vlVtG-tG~iG~~l~~~L~~~g--~~V~~~~r~~~~~--~~l~~~~~~-~~~~D~~~-~~~-~~~~~~d~v~~~~~ 129 (364)
++|+|+||| +|++|..++..|+.+| ++|++++++++.. ..+...... .+.+ +.+ .+. .+++++|.|+|+++
T Consensus 7 ~~mKI~ViGAaG~VG~~la~~L~~~g~~~ev~l~Di~~~~~~~~dL~~~~~~~~v~~-~~~t~d~~~al~gaDvVi~~ag 85 (326)
T 1smk_A 7 PGFKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNAPGVTADISHMDTGAVVRG-FLGQQQLEAALTGMDLIIVPAG 85 (326)
T ss_dssp -CEEEEEETTTSTTHHHHHHHHHHCTTEEEEEEEESSSHHHHHHHHHTSCSSCEEEE-EESHHHHHHHHTTCSEEEECCC
T ss_pred CCCEEEEECCCChHHHHHHHHHHhCCCCCEEEEEeCCCcHhHHHHhhcccccceEEE-EeCCCCHHHHcCCCCEEEEcCC
Confidence 347999999 8999999999999998 8999999876521 112221111 1222 221 233 67899999999987
Q ss_pred ecCCCCCCCC----hhhhHHHHHHHHhhcCCccEEEEEcc
Q 017914 130 SIPPLEGTGD----PMLKHGELLRSTLMNGHLQWLGYLSS 165 (364)
Q Consensus 130 ~~~~~~~~~~----~~~~~~~~l~~a~~~~~~~r~v~~Ss 165 (364)
.......... .......++.+++.+.+.+++|+++|
T Consensus 86 ~~~~~g~~r~dl~~~N~~~~~~i~~~i~~~~p~~~viv~S 125 (326)
T 1smk_A 86 VPRKPGMTRDDLFKINAGIVKTLCEGIAKCCPRAIVNLIS 125 (326)
T ss_dssp CCCCSSCCCSHHHHHHHHHHHHHHHHHHHHCTTSEEEECC
T ss_pred cCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEEC
Confidence 5332211111 11233456777777777777888876
|
| >3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=98.26 E-value=3.2e-06 Score=76.71 Aligned_cols=93 Identities=16% Similarity=0.099 Sum_probs=69.2
Q ss_pred CCCCeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCChhhH--HhhccCceeeEEEEecCCC
Q 017914 57 QSPNRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETAL--MILTTLKNYTHLLVSIPPL 134 (364)
Q Consensus 57 ~~~~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~--~~~~~~d~v~~~~~~~~~~ 134 (364)
...|||+|+|+|++|+.+++.|.+ .++|.+.+|+.++.+.+. ..+..+..|+.|.+. ..++++|.|++++..
T Consensus 14 g~~mkilvlGaG~vG~~~~~~L~~-~~~v~~~~~~~~~~~~~~-~~~~~~~~d~~d~~~l~~~~~~~DvVi~~~p~---- 87 (365)
T 3abi_A 14 GRHMKVLILGAGNIGRAIAWDLKD-EFDVYIGDVNNENLEKVK-EFATPLKVDASNFDKLVEVMKEFELVIGALPG---- 87 (365)
T ss_dssp --CCEEEEECCSHHHHHHHHHHTT-TSEEEEEESCHHHHHHHT-TTSEEEECCTTCHHHHHHHHTTCSEEEECCCG----
T ss_pred CCccEEEEECCCHHHHHHHHHHhc-CCCeEEEEcCHHHHHHHh-ccCCcEEEecCCHHHHHHHHhCCCEEEEecCC----
Confidence 345799999999999999988865 589999999887776664 467788899999764 667899999987632
Q ss_pred CCCCChhhhHHHHHHHHhhcCCccEEEEEc
Q 017914 135 EGTGDPMLKHGELLRSTLMNGHLQWLGYLS 164 (364)
Q Consensus 135 ~~~~~~~~~~~~~l~~a~~~~~~~r~v~~S 164 (364)
. ....+..+|.+.|+ ++|=+|
T Consensus 88 ------~--~~~~v~~~~~~~g~-~yvD~s 108 (365)
T 3abi_A 88 ------F--LGFKSIKAAIKSKV-DMVDVS 108 (365)
T ss_dssp ------G--GHHHHHHHHHHHTC-EEEECC
T ss_pred ------c--ccchHHHHHHhcCc-ceEeee
Confidence 1 23456677777765 565444
|
| >4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes} | Back alignment and structure |
|---|
Probab=98.20 E-value=3.4e-06 Score=77.56 Aligned_cols=88 Identities=14% Similarity=0.204 Sum_probs=65.9
Q ss_pred CCeEEEEcCChhhHHHHHHHHhCC---CEEEEEEeCchhhhhhhh-------CCceEEEccCChhhH--Hhhcc--Ccee
Q 017914 59 PNRMLILGMGFVGRIFAEKIKNQG---WVVSGTCTNVMKKKELEQ-------SGFDVHLFNANETAL--MILTT--LKNY 124 (364)
Q Consensus 59 ~~~vlVtGtG~iG~~l~~~L~~~g---~~V~~~~r~~~~~~~l~~-------~~~~~~~~D~~~~~~--~~~~~--~d~v 124 (364)
|++|+|+|+|++|+.+++.|.+.| .+|++.+|+.++...+.. .++..+.+|++|.+. ..+++ +|+|
T Consensus 1 M~kVlIiGaGgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~~~~~~~~~~~~~D~~d~~~l~~~l~~~~~DvV 80 (405)
T 4ina_A 1 MAKVLQIGAGGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKAKGYGEIDITTVDADSIEELVALINEVKPQIV 80 (405)
T ss_dssp -CEEEEECCSHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHHHHTTCCCCEEEECCTTCHHHHHHHHHHHCCSEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHhhhhcCCceEEEEecCCCHHHHHHHHHhhCCCEE
Confidence 479999999999999999999998 399999999887665432 258889999998653 55555 8999
Q ss_pred eEEEEecCCCCCCCChhhhHHHHHHHHhhcCCcc
Q 017914 125 THLLVSIPPLEGTGDPMLKHGELLRSTLMNGHLQ 158 (364)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~ 158 (364)
+|+++. . ....+..++.+.|+.
T Consensus 81 in~ag~----------~--~~~~v~~a~l~~g~~ 102 (405)
T 4ina_A 81 LNIALP----------Y--QDLTIMEACLRTGVP 102 (405)
T ss_dssp EECSCG----------G--GHHHHHHHHHHHTCC
T ss_pred EECCCc----------c--cChHHHHHHHHhCCC
Confidence 998742 1 124556666666665
|
| >2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=98.12 E-value=3.3e-06 Score=78.80 Aligned_cols=75 Identities=19% Similarity=0.325 Sum_probs=59.7
Q ss_pred CCCCCeEEEEcCChhhHHHHHHHHhC-CCEEEEEEeCchhhhhhhh-CCceEEEccCChhh-H-HhhccCceeeEEEEe
Q 017914 56 WQSPNRMLILGMGFVGRIFAEKIKNQ-GWVVSGTCTNVMKKKELEQ-SGFDVHLFNANETA-L-MILTTLKNYTHLLVS 130 (364)
Q Consensus 56 ~~~~~~vlVtGtG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~l~~-~~~~~~~~D~~~~~-~-~~~~~~d~v~~~~~~ 130 (364)
...+++|+|+|+|++|+.+++.|++. |++|++++|+.++...+.. .++..+.+|+.|.+ . ..+.++|+|++++..
T Consensus 20 ~l~~k~VlIiGAGgiG~aia~~L~~~~g~~V~v~~R~~~ka~~la~~~~~~~~~~D~~d~~~l~~~l~~~DvVIn~tp~ 98 (467)
T 2axq_A 20 RHMGKNVLLLGSGFVAQPVIDTLAANDDINVTVACRTLANAQALAKPSGSKAISLDVTDDSALDKVLADNDVVISLIPY 98 (467)
T ss_dssp ---CEEEEEECCSTTHHHHHHHHHTSTTEEEEEEESSHHHHHHHHGGGTCEEEECCTTCHHHHHHHHHTSSEEEECSCG
T ss_pred CCCCCEEEEECChHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhcCCcEEEEecCCHHHHHHHHcCCCEEEECCch
Confidence 34567999999999999999999998 7899999999887666543 35677889998865 3 567889999998753
|
| >1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A | Back alignment and structure |
|---|
Probab=98.09 E-value=7.5e-06 Score=72.13 Aligned_cols=101 Identities=13% Similarity=-0.048 Sum_probs=65.1
Q ss_pred CeEEEEc-CChhhHHHHHHHHhCCC--EEEEEEe--Cchhhhh----hhh-----CCceEEEccCChhhHHhhccCceee
Q 017914 60 NRMLILG-MGFVGRIFAEKIKNQGW--VVSGTCT--NVMKKKE----LEQ-----SGFDVHLFNANETALMILTTLKNYT 125 (364)
Q Consensus 60 ~~vlVtG-tG~iG~~l~~~L~~~g~--~V~~~~r--~~~~~~~----l~~-----~~~~~~~~D~~~~~~~~~~~~d~v~ 125 (364)
|||+||| +|++|+.++..|+.+|+ ++.++++ +.++.+. +.+ ..+.+.. + + ..+++++|.|+
T Consensus 1 mKI~IiGAaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~v~~-~--~--~~a~~~aDvVi 75 (303)
T 1o6z_A 1 TKVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQ-G--G--YEDTAGSDVVV 75 (303)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEE-C--C--GGGGTTCSEEE
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEcCCCChhhHHHHHHHHHHHHhhCCCcEEEe-C--C--HHHhCCCCEEE
Confidence 6899999 99999999999998875 6888888 5433221 111 1222222 1 1 25688999999
Q ss_pred EEEEecCCCCCCCC----hhhhHHHHHHHHhhcCCccEEEEEcc
Q 017914 126 HLLVSIPPLEGTGD----PMLKHGELLRSTLMNGHLQWLGYLSS 165 (364)
Q Consensus 126 ~~~~~~~~~~~~~~----~~~~~~~~l~~a~~~~~~~r~v~~Ss 165 (364)
|+++.......... .......++.+++.+.+.+++|+++|
T Consensus 76 ~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~p~~~viv~S 119 (303)
T 1o6z_A 76 ITAGIPRQPGQTRIDLAGDNAPIMEDIQSSLDEHNDDYISLTTS 119 (303)
T ss_dssp ECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHTTCSCCEEEECC
T ss_pred EcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEeC
Confidence 99975332111111 11234467777777777888888876
|
| >2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A | Back alignment and structure |
|---|
Probab=98.07 E-value=6.1e-06 Score=69.94 Aligned_cols=69 Identities=12% Similarity=0.016 Sum_probs=56.8
Q ss_pred CCCeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCChhhH--H-hhccCceeeEEE
Q 017914 58 SPNRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETAL--M-ILTTLKNYTHLL 128 (364)
Q Consensus 58 ~~~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~--~-~~~~~d~v~~~~ 128 (364)
..++|+|+|.|.+|+.+++.|.+.|+ |++++++++....+. .++.++.+|.++++. . .+.++|.|+.+.
T Consensus 8 ~~~~viI~G~G~~G~~la~~L~~~g~-v~vid~~~~~~~~~~-~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~ 79 (234)
T 2aef_A 8 KSRHVVICGWSESTLECLRELRGSEV-FVLAEDENVRKKVLR-SGANFVHGDPTRVSDLEKANVRGARAVIVDL 79 (234)
T ss_dssp --CEEEEESCCHHHHHHHHHSTTSEE-EEEESCGGGHHHHHH-TTCEEEESCTTCHHHHHHTTCTTCSEEEECC
T ss_pred CCCEEEEECCChHHHHHHHHHHhCCe-EEEEECCHHHHHHHh-cCCeEEEcCCCCHHHHHhcCcchhcEEEEcC
Confidence 34789999999999999999999999 999999988776666 789999999999774 2 256778777654
|
| >1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A* | Back alignment and structure |
|---|
Probab=98.06 E-value=3.3e-06 Score=74.80 Aligned_cols=160 Identities=12% Similarity=-0.023 Sum_probs=89.4
Q ss_pred CeEEEEc-CChhhHHHHHHHHhCCC--EEEEEEe--Cchhhhh----hhhC-CceEEEccCCh-hh--HHhhccCceeeE
Q 017914 60 NRMLILG-MGFVGRIFAEKIKNQGW--VVSGTCT--NVMKKKE----LEQS-GFDVHLFNANE-TA--LMILTTLKNYTH 126 (364)
Q Consensus 60 ~~vlVtG-tG~iG~~l~~~L~~~g~--~V~~~~r--~~~~~~~----l~~~-~~~~~~~D~~~-~~--~~~~~~~d~v~~ 126 (364)
|||+||| +|++|++++..|+.+|. ++.++++ +.++... +... ...-...++.+ .+ ..+++++|.|+|
T Consensus 1 mKI~V~GaaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~~i~~~~d~l~~al~gaD~Vi~ 80 (313)
T 1hye_A 1 MKVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVESDENLRIIDESDVVII 80 (313)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEETTCGGGGTTCSEEEE
T ss_pred CEEEEECCCChhHHHHHHHHHhCCCCCEEEEEcCCCchhhhHHHHHHHHHhHHhcCCCeEEEeCCcchHHHhCCCCEEEE
Confidence 5899999 69999999999999885 6777887 5432221 2110 00000112222 11 267899999999
Q ss_pred EEEecCCCCCCC----ChhhhHHHHHHHHhhcCCccEEEEEccceeecCCCCccccCCCCCCCCChhHH-HHHHHHHHHH
Q 017914 127 LLVSIPPLEGTG----DPMLKHGELLRSTLMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANPTTELGR-LRLSAEKGWL 201 (364)
Q Consensus 127 ~~~~~~~~~~~~----~~~~~~~~~l~~a~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~~-sK~~~E~~~~ 201 (364)
+++......... ........++.+++++.+ +++|+++|--+.-... ...+.....+...++. +.+...++..
T Consensus 81 ~Ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~-~~~vlv~SNPv~~~t~--~~~k~~~~p~~rviG~gt~LD~~r~~~ 157 (313)
T 1hye_A 81 TSGVPRKEGMSRMDLAKTNAKIVGKYAKKIAEIC-DTKIFVITNPVDVMTY--KALVDSKFERNQVFGLGTHLDSLRFKV 157 (313)
T ss_dssp CCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHC-CCEEEECSSSHHHHHH--HHHHHHCCCTTSEEECTTHHHHHHHHH
T ss_pred CCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHhC-CeEEEEecCcHHHHHH--HHHHhhCcChhcEEEeCccHHHHHHHH
Confidence 997533211111 112233457777777777 8788887621110000 0011112334455666 5655666666
Q ss_pred HhhhhcCCcEEEEEecceecCC
Q 017914 202 NLGRDLGISAQVFRLGGIYGPG 223 (364)
Q Consensus 202 ~~~~~~~~~~~ilRp~~v~g~~ 223 (364)
.+++..|++..-++. .++|.+
T Consensus 158 ~la~~lgv~~~~v~~-~v~G~H 178 (313)
T 1hye_A 158 AIAKFFGVHIDEVRT-RIIGEH 178 (313)
T ss_dssp HHHHHHTCCGGGEEC-CEEECS
T ss_pred HHHHHhCcCHHHeEE-EEeecc
Confidence 666666766555553 677755
|
| >3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A* | Back alignment and structure |
|---|
Probab=98.01 E-value=1.5e-05 Score=73.23 Aligned_cols=70 Identities=17% Similarity=0.168 Sum_probs=60.7
Q ss_pred CCeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCChhhH---HhhccCceeeEEE
Q 017914 59 PNRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETAL---MILTTLKNYTHLL 128 (364)
Q Consensus 59 ~~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~---~~~~~~d~v~~~~ 128 (364)
.++|+|+|.|.+|+.+++.|.+.|++|++++++++....+...++.++.+|.++++. ..+..+|.|+.+.
T Consensus 4 ~~~viIiG~Gr~G~~va~~L~~~g~~vvvId~d~~~v~~~~~~g~~vi~GDat~~~~L~~agi~~A~~viv~~ 76 (413)
T 3l9w_A 4 GMRVIIAGFGRFGQITGRLLLSSGVKMVVLDHDPDHIETLRKFGMKVFYGDATRMDLLESAGAAKAEVLINAI 76 (413)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEECCHHHHHHHHHTTCCCEESCTTCHHHHHHTTTTTCSEEEECC
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHhCCCeEEEcCCCCHHHHHhcCCCccCEEEECC
Confidence 468999999999999999999999999999999998888877899999999999885 2246677776654
|
| >1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1 | Back alignment and structure |
|---|
Probab=97.85 E-value=2.2e-05 Score=64.53 Aligned_cols=96 Identities=17% Similarity=0.072 Sum_probs=64.5
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCChhhH-Hh----h--ccCceeeEEE
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETAL-MI----L--TTLKNYTHLL 128 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~-~~----~--~~~d~v~~~~ 128 (364)
..+++|||+| +|.||..+++.+...|++|++++|++++.+.+.+.+... ..|..+.+. .. . .++|.+++++
T Consensus 37 ~~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~~~g~~~-~~d~~~~~~~~~~~~~~~~~~~D~vi~~~ 115 (198)
T 1pqw_A 37 SPGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREMLSRLGVEY-VGDSRSVDFADEILELTDGYGVDVVLNSL 115 (198)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHTTCCSE-EEETTCSTHHHHHHHHTTTCCEEEEEECC
T ss_pred CCCCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCE-EeeCCcHHHHHHHHHHhCCCCCeEEEECC
Confidence 4568999999 899999999999999999999999887765555445443 246665433 11 1 2477777765
Q ss_pred EecCCCCCCCChhhhHHHHHHHHhhcCCccEEEEEccce
Q 017914 129 VSIPPLEGTGDPMLKHGELLRSTLMNGHLQWLGYLSSTG 167 (364)
Q Consensus 129 ~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~r~v~~Ss~~ 167 (364)
+. .........++..| ++|.+++..
T Consensus 116 g~------------~~~~~~~~~l~~~G--~~v~~g~~~ 140 (198)
T 1pqw_A 116 AG------------EAIQRGVQILAPGG--RFIELGKKD 140 (198)
T ss_dssp CT------------HHHHHHHHTEEEEE--EEEECSCGG
T ss_pred ch------------HHHHHHHHHhccCC--EEEEEcCCC
Confidence 31 12334455555544 888887643
|
| >2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae} | Back alignment and structure |
|---|
Probab=97.80 E-value=4.6e-05 Score=63.56 Aligned_cols=72 Identities=18% Similarity=0.318 Sum_probs=49.6
Q ss_pred CCCeEEEE-c----------------CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCChhhH----H
Q 017914 58 SPNRMLIL-G----------------MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETAL----M 116 (364)
Q Consensus 58 ~~~~vlVt-G----------------tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~----~ 116 (364)
.+|+|||| | +|.+|.++++.|+++|++|+++.|....... ...++.++..+-...-. .
T Consensus 2 ~gk~vlVTgG~T~E~IDpVR~ItN~SSG~mG~aiA~~~~~~Ga~V~lv~~~~~~~~~-~~~~~~~~~v~s~~em~~~v~~ 80 (232)
T 2gk4_A 2 NAMKILVTSGGTSEAIDSVRSITNHSTGHLGKIITETLLSAGYEVCLITTKRALKPE-PHPNLSIREITNTKDLLIEMQE 80 (232)
T ss_dssp -CCEEEEECSBCEEESSSSEEEEECCCCHHHHHHHHHHHHTTCEEEEEECTTSCCCC-CCTTEEEEECCSHHHHHHHHHH
T ss_pred CCCEEEEeCCCcccccCceeeccCCCCCHHHHHHHHHHHHCCCEEEEEeCCcccccc-CCCCeEEEEHhHHHHHHHHHHH
Confidence 36899999 6 6899999999999999999999997532111 01355555443222111 3
Q ss_pred hhccCceeeEEEEe
Q 017914 117 ILTTLKNYTHLLVS 130 (364)
Q Consensus 117 ~~~~~d~v~~~~~~ 130 (364)
.+..+|+++++|+.
T Consensus 81 ~~~~~Dili~aAAv 94 (232)
T 2gk4_A 81 RVQDYQVLIHSMAV 94 (232)
T ss_dssp HGGGCSEEEECSBC
T ss_pred hcCCCCEEEEcCcc
Confidence 45678999999875
|
| >4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=97.78 E-value=2.3e-05 Score=73.17 Aligned_cols=69 Identities=17% Similarity=0.176 Sum_probs=58.3
Q ss_pred CCeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhh-CCceEEEccCChhhH---HhhccCceeeEE
Q 017914 59 PNRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQ-SGFDVHLFNANETAL---MILTTLKNYTHL 127 (364)
Q Consensus 59 ~~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~-~~~~~~~~D~~~~~~---~~~~~~d~v~~~ 127 (364)
.|+|+|.|.|-+|++|++.|.+.||+|++++++++....+.+ .++..+.||-++++. ..++.+|.++-+
T Consensus 3 ~M~iiI~G~G~vG~~la~~L~~~~~~v~vId~d~~~~~~~~~~~~~~~i~Gd~~~~~~L~~Agi~~ad~~ia~ 75 (461)
T 4g65_A 3 AMKIIILGAGQVGGTLAENLVGENNDITIVDKDGDRLRELQDKYDLRVVNGHASHPDVLHEAGAQDADMLVAV 75 (461)
T ss_dssp CEEEEEECCSHHHHHHHHHTCSTTEEEEEEESCHHHHHHHHHHSSCEEEESCTTCHHHHHHHTTTTCSEEEEC
T ss_pred cCEEEEECCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHhcCcEEEEEcCCCHHHHHhcCCCcCCEEEEE
Confidence 589999999999999999999999999999999988877653 588999999999885 334667766543
|
| >2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A* | Back alignment and structure |
|---|
Probab=97.73 E-value=5.4e-05 Score=63.10 Aligned_cols=65 Identities=18% Similarity=0.164 Sum_probs=50.2
Q ss_pred CCCeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCChhhHHhhccCceeeEEE
Q 017914 58 SPNRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETALMILTTLKNYTHLL 128 (364)
Q Consensus 58 ~~~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~~~~~~~d~v~~~~ 128 (364)
.+|+|.|+|+|.+|+.+++.|.+.|++|++.+|++++.+.+.+.++... +.+ +.+.++|.|+.+.
T Consensus 27 ~~~~I~iiG~G~~G~~la~~l~~~g~~V~~~~r~~~~~~~~~~~g~~~~-----~~~-~~~~~~DvVi~av 91 (215)
T 2vns_A 27 EAPKVGILGSGDFARSLATRLVGSGFKVVVGSRNPKRTARLFPSAAQVT-----FQE-EAVSSPEVIFVAV 91 (215)
T ss_dssp --CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSHHHHHHHSBTTSEEE-----EHH-HHTTSCSEEEECS
T ss_pred CCCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCcee-----cHH-HHHhCCCEEEECC
Confidence 4578999999999999999999999999999999887766654555542 222 4567889888765
|
| >1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A | Back alignment and structure |
|---|
Probab=97.70 E-value=6.1e-05 Score=67.41 Aligned_cols=68 Identities=10% Similarity=0.016 Sum_probs=56.6
Q ss_pred CCeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCChhhH--Hh-hccCceeeEEE
Q 017914 59 PNRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETAL--MI-LTTLKNYTHLL 128 (364)
Q Consensus 59 ~~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~--~~-~~~~d~v~~~~ 128 (364)
.++|+|+|.|.+|+.+++.|.++|+ |++++++++..+ +.+.++.++.+|.+|++. .+ ++++|.++.+.
T Consensus 115 ~~~viI~G~G~~g~~l~~~L~~~g~-v~vid~~~~~~~-~~~~~~~~i~gd~~~~~~L~~a~i~~a~~vi~~~ 185 (336)
T 1lnq_A 115 SRHVVICGWSESTLECLRELRGSEV-FVLAEDENVRKK-VLRSGANFVHGDPTRVSDLEKANVRGARAVIVDL 185 (336)
T ss_dssp -CEEEEESCCHHHHHHHTTGGGSCE-EEEESCGGGHHH-HHHTTCEEEESCTTSHHHHHHTCSTTEEEEEECC
T ss_pred cCCEEEECCcHHHHHHHHHHHhCCc-EEEEeCChhhhh-HHhCCcEEEEeCCCCHHHHHhcChhhccEEEEcC
Confidence 4689999999999999999999999 999999998887 777899999999999874 22 45666666543
|
| >4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A | Back alignment and structure |
|---|
Probab=97.56 E-value=0.00043 Score=61.98 Aligned_cols=75 Identities=13% Similarity=-0.017 Sum_probs=54.9
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHH-hCCCEEEEEEeCchhhh----------------hhhh--CCceEEEccCChhhH-
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIK-NQGWVVSGTCTNVMKKK----------------ELEQ--SGFDVHLFNANETAL- 115 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~-~~g~~V~~~~r~~~~~~----------------~l~~--~~~~~~~~D~~~~~~- 115 (364)
..+|++|||| +..+|.+.+..|. ..|..|+++.+..+..+ .++. .....+.+|+++++.
T Consensus 48 ~~pK~vLVtGaSsGiGlA~AialAf~~GA~vi~v~~~~~~~~~~~atag~~~~~a~~~~i~~~G~~a~~i~~Dv~d~e~i 127 (401)
T 4ggo_A 48 KAPKNVLVLGCSNGYGLASRITAAFGYGAATIGVSFEKAGSETKYGTPGWYNNLAFDEAAKREGLYSVTIDGDAFSDEIK 127 (401)
T ss_dssp CCCCEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHHTCCEEEEESCTTSHHHH
T ss_pred CCCCEEEEECCCCcHHHHHHHHHHhhCCCCEEEEecCCcccccccccccchhHHHHHHHHHHcCCCceeEeCCCCCHHHH
Confidence 4568999999 8889999999888 67999999988543321 1111 346789999999764
Q ss_pred --------HhhccCceeeEEEEec
Q 017914 116 --------MILTTLKNYTHLLVSI 131 (364)
Q Consensus 116 --------~~~~~~d~v~~~~~~~ 131 (364)
..+..+|.++|.++..
T Consensus 128 ~~vi~~i~~~~G~IDiLVhS~A~~ 151 (401)
T 4ggo_A 128 AQVIEEAKKKGIKFDLIVYSLASP 151 (401)
T ss_dssp HHHHHHHHHTTCCEEEEEECCCCS
T ss_pred HHHHHHHHHhcCCCCEEEEecccc
Confidence 1224679999988754
|
| >1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A* | Back alignment and structure |
|---|
Probab=97.53 E-value=2.7e-05 Score=64.72 Aligned_cols=69 Identities=12% Similarity=0.005 Sum_probs=47.7
Q ss_pred CeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhC-CceEEEccCChhhH-HhhccCceeeEEE
Q 017914 60 NRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQS-GFDVHLFNANETAL-MILTTLKNYTHLL 128 (364)
Q Consensus 60 ~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~-~~~~~~~D~~~~~~-~~~~~~d~v~~~~ 128 (364)
|+|+|+| +|.+|+.+++.|.+.|++|++++|++++.+.+.+. +..+...|+...+. +.+.++|.|++++
T Consensus 1 m~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~Vi~~~ 72 (212)
T 1jay_A 1 MRVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRRIAGDASITGMKNEDAAEACDIAVLTI 72 (212)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHHHHHHHSSCCEEEEEHHHHHHHCSEEEECS
T ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhccccccCCCChhhHHHHHhcCCEEEEeC
Confidence 5899999 99999999999999999999999987765544321 10000011111112 4567899999876
|
| >3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=97.52 E-value=0.00021 Score=63.14 Aligned_cols=68 Identities=21% Similarity=0.289 Sum_probs=53.1
Q ss_pred CCCCCeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCChhhHHhhccCceeeEEE
Q 017914 56 WQSPNRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETALMILTTLKNYTHLL 128 (364)
Q Consensus 56 ~~~~~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~~~~~~~d~v~~~~ 128 (364)
...+|+|.|+|.|.+|..+++.|.+.|++|++.+|++++.+.+.+.++.. ..+.. +.+..+|.|+-+.
T Consensus 18 ~~~m~~I~iIG~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~l~~~g~~~----~~~~~-~~~~~aDvvi~~v 85 (310)
T 3doj_A 18 GSHMMEVGFLGLGIMGKAMSMNLLKNGFKVTVWNRTLSKCDELVEHGASV----CESPA-EVIKKCKYTIAML 85 (310)
T ss_dssp CCCSCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSGGGGHHHHHTTCEE----CSSHH-HHHHHCSEEEECC
T ss_pred cccCCEEEEECccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHCCCeE----cCCHH-HHHHhCCEEEEEc
Confidence 35568999999999999999999999999999999998877776555532 11222 4567788887765
|
| >3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis} | Back alignment and structure |
|---|
Probab=97.49 E-value=0.00038 Score=64.67 Aligned_cols=42 Identities=24% Similarity=0.314 Sum_probs=38.0
Q ss_pred CCeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhh
Q 017914 59 PNRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQ 100 (364)
Q Consensus 59 ~~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~ 100 (364)
+|+|.|+|+|++|..++..|.+.|++|++++|++++.+.+.+
T Consensus 2 ~mkI~VIG~G~vG~~lA~~La~~G~~V~~~D~~~~~v~~l~~ 43 (450)
T 3gg2_A 2 SLDIAVVGIGYVGLVSATCFAELGANVRCIDTDRNKIEQLNS 43 (450)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH
T ss_pred CCEEEEECcCHHHHHHHHHHHhcCCEEEEEECCHHHHHHHHc
Confidence 379999999999999999999999999999999887776654
|
| >2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis} | Back alignment and structure |
|---|
Probab=97.48 E-value=0.00013 Score=64.41 Aligned_cols=48 Identities=15% Similarity=0.169 Sum_probs=39.7
Q ss_pred CCCeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceE
Q 017914 58 SPNRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDV 105 (364)
Q Consensus 58 ~~~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~ 105 (364)
++|+|.|+|.|.+|..++..|.+.|++|++++|+++..+.+.+.++..
T Consensus 2 ~~m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~g~~~ 49 (316)
T 2ew2_A 2 NAMKIAIAGAGAMGSRLGIMLHQGGNDVTLIDQWPAHIEAIRKNGLIA 49 (316)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHCEEE
T ss_pred CCCeEEEECcCHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHhCCEEE
Confidence 357999999999999999999999999999999887776665545443
|
| >1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B* | Back alignment and structure |
|---|
Probab=97.47 E-value=0.00042 Score=59.02 Aligned_cols=97 Identities=11% Similarity=0.071 Sum_probs=63.6
Q ss_pred CCCeEEEEcCChhhHHHHHHHHhCCC-EEEEEEeCc-------------------hhhhhhh----h--CC--ceEEEcc
Q 017914 58 SPNRMLILGMGFVGRIFAEKIKNQGW-VVSGTCTNV-------------------MKKKELE----Q--SG--FDVHLFN 109 (364)
Q Consensus 58 ~~~~vlVtGtG~iG~~l~~~L~~~g~-~V~~~~r~~-------------------~~~~~l~----~--~~--~~~~~~D 109 (364)
..++|+|+|.|.+|+.+++.|...|. ++++++++. .+.+.+. . +. +..+..+
T Consensus 30 ~~~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~~~~ 109 (249)
T 1jw9_B 30 KDSRVLIVGLGGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPVNAL 109 (249)
T ss_dssp HHCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEECSC
T ss_pred hCCeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHHHCCCcEEEEEecc
Confidence 35799999999999999999999996 899999876 2322221 1 23 3445555
Q ss_pred CChhhH-HhhccCceeeEEEEecCCCCCCCChhhhHHHHHHHHhhcCCccEEEEEccc
Q 017914 110 ANETAL-MILTTLKNYTHLLVSIPPLEGTGDPMLKHGELLRSTLMNGHLQWLGYLSST 166 (364)
Q Consensus 110 ~~~~~~-~~~~~~d~v~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~r~v~~Ss~ 166 (364)
+++.+. ..+.++|.|+.+.. +. .....+..++...++. +|+.+..
T Consensus 110 ~~~~~~~~~~~~~DvVi~~~d---------~~--~~~~~l~~~~~~~~~p-~i~~~~~ 155 (249)
T 1jw9_B 110 LDDAELAALIAEHDLVLDCTD---------NV--AVRNQLNAGCFAAKVP-LVSGAAI 155 (249)
T ss_dssp CCHHHHHHHHHTSSEEEECCS---------SH--HHHHHHHHHHHHHTCC-EEEEEEE
T ss_pred CCHhHHHHHHhCCCEEEEeCC---------CH--HHHHHHHHHHHHcCCC-EEEeeec
Confidence 665443 56788999887652 11 2334555666666654 6665543
|
| >3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium} | Back alignment and structure |
|---|
Probab=97.46 E-value=0.00022 Score=62.79 Aligned_cols=67 Identities=18% Similarity=0.088 Sum_probs=51.9
Q ss_pred CCCeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCChhhHHhhccCceeeEEE
Q 017914 58 SPNRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETALMILTTLKNYTHLL 128 (364)
Q Consensus 58 ~~~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~~~~~~~d~v~~~~ 128 (364)
++|+|.|+|.|.+|..++..|.+.|++|++.+|++++.+.+.+.+......|+. +.+.++|.|+-+.
T Consensus 6 ~~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~----e~~~~aDvvi~~v 72 (303)
T 3g0o_A 6 TDFHVGIVGLGSMGMGAARSCLRAGLSTWGADLNPQACANLLAEGACGAAASAR----EFAGVVDALVILV 72 (303)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCSEEESSST----TTTTTCSEEEECC
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHcCCccccCCHH----HHHhcCCEEEEEC
Confidence 457999999999999999999999999999999998877776666544222332 4556778777765
|
| >1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A* | Back alignment and structure |
|---|
Probab=97.46 E-value=0.00035 Score=58.08 Aligned_cols=70 Identities=10% Similarity=-0.027 Sum_probs=50.7
Q ss_pred CCCCeEEEEc-C----------------ChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCChhhH----
Q 017914 57 QSPNRMLILG-M----------------GFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETAL---- 115 (364)
Q Consensus 57 ~~~~~vlVtG-t----------------G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~---- 115 (364)
..+++||||| + |.+|.++++.|.++|++|+++.|... .. . ..++. ..|+.+.+.
T Consensus 6 l~gk~vlVTgG~T~E~iDpVR~itN~SSg~iG~aiA~~~~~~Ga~V~l~~~~~~-l~-~-~~g~~--~~dv~~~~~~~~~ 80 (226)
T 1u7z_A 6 LKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVS-LP-T-PPFVK--RVDVMTALEMEAA 80 (226)
T ss_dssp TTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCC-CC-C-CTTEE--EEECCSHHHHHHH
T ss_pred CCCCEEEEECCCCCcccCceeeccCCCccHHHHHHHHHHHHCCCEEEEEECCcc-cc-c-CCCCe--EEccCcHHHHHHH
Confidence 4578999995 3 99999999999999999999988642 11 1 12333 457766432
Q ss_pred --HhhccCceeeEEEEec
Q 017914 116 --MILTTLKNYTHLLVSI 131 (364)
Q Consensus 116 --~~~~~~d~v~~~~~~~ 131 (364)
..+..+|+++++|+..
T Consensus 81 v~~~~~~~Dili~~Aav~ 98 (226)
T 1u7z_A 81 VNASVQQQNIFIGCAAVA 98 (226)
T ss_dssp HHHHGGGCSEEEECCBCC
T ss_pred HHHhcCCCCEEEECCccc
Confidence 3346789999998754
|
| >1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A* | Back alignment and structure |
|---|
Probab=97.45 E-value=0.00023 Score=63.48 Aligned_cols=95 Identities=21% Similarity=0.230 Sum_probs=63.0
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCCh-hhH-Hhh-----ccCceeeEEE
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANE-TAL-MIL-----TTLKNYTHLL 128 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~-~~~-~~~-----~~~d~v~~~~ 128 (364)
..+++|||+| +|.||..+++.+...|++|++++|++++.+.+.+.+... ..|..+ .++ ..+ .++|.+++++
T Consensus 144 ~~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~~~g~~~-~~d~~~~~~~~~~~~~~~~~~~d~vi~~~ 222 (333)
T 1v3u_A 144 KGGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLKQIGFDA-AFNYKTVNSLEEALKKASPDGYDCYFDNV 222 (333)
T ss_dssp CSSCEEEEESTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSE-EEETTSCSCHHHHHHHHCTTCEEEEEESS
T ss_pred CCCCEEEEecCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcCCcE-EEecCCHHHHHHHHHHHhCCCCeEEEECC
Confidence 3568999999 799999999999999999999999887766655455432 346665 333 222 2467777766
Q ss_pred EecCCCCCCCChhhhHHHHHHHHhhcCCccEEEEEccc
Q 017914 129 VSIPPLEGTGDPMLKHGELLRSTLMNGHLQWLGYLSST 166 (364)
Q Consensus 129 ~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~r~v~~Ss~ 166 (364)
+. ......+..++..| ++|.++..
T Consensus 223 g~------------~~~~~~~~~l~~~G--~~v~~g~~ 246 (333)
T 1v3u_A 223 GG------------EFLNTVLSQMKDFG--KIAICGAI 246 (333)
T ss_dssp CH------------HHHHHHHTTEEEEE--EEEECCCC
T ss_pred Ch------------HHHHHHHHHHhcCC--EEEEEecc
Confidence 41 11233344444433 78877653
|
| >2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=97.42 E-value=0.00024 Score=64.30 Aligned_cols=102 Identities=17% Similarity=0.083 Sum_probs=64.9
Q ss_pred CCCCeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhh-CCceEEEccCChhh-H-HhhccCceeeEEEEecCC
Q 017914 57 QSPNRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQ-SGFDVHLFNANETA-L-MILTTLKNYTHLLVSIPP 133 (364)
Q Consensus 57 ~~~~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~-~~~~~~~~D~~~~~-~-~~~~~~d~v~~~~~~~~~ 133 (364)
..+++|+|+|+|.||+.+++.|...|++|++++|++++.+.+.+ .+.. +..|..+.+ . +.+.++|.|++++.....
T Consensus 164 l~~~~V~ViGaG~iG~~~a~~l~~~Ga~V~~~d~~~~~~~~~~~~~g~~-~~~~~~~~~~l~~~~~~~DvVi~~~g~~~~ 242 (369)
T 2eez_A 164 VAPASVVILGGGTVGTNAAKIALGMGAQVTILDVNHKRLQYLDDVFGGR-VITLTATEANIKKSVQHADLLIGAVLVPGA 242 (369)
T ss_dssp BCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTTS-EEEEECCHHHHHHHHHHCSEEEECCC----
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhcCce-EEEecCCHHHHHHHHhCCCEEEECCCCCcc
Confidence 34589999999999999999999999999999999877655433 3333 345555433 3 566789999987753210
Q ss_pred CCCCCChhhhHHHHHHHHhhcCCccEEEEEccc
Q 017914 134 LEGTGDPMLKHGELLRSTLMNGHLQWLGYLSST 166 (364)
Q Consensus 134 ~~~~~~~~~~~~~~l~~a~~~~~~~r~v~~Ss~ 166 (364)
..+. ......+..++.. .++|.+|+.
T Consensus 243 ----~~~~-li~~~~l~~mk~g--g~iV~v~~~ 268 (369)
T 2eez_A 243 ----KAPK-LVTRDMLSLMKEG--AVIVDVAVD 268 (369)
T ss_dssp -------C-CSCHHHHTTSCTT--CEEEECC--
T ss_pred ----ccch-hHHHHHHHhhcCC--CEEEEEecC
Confidence 0000 1123344444433 368888753
|
| >1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=97.39 E-value=0.00017 Score=64.13 Aligned_cols=94 Identities=17% Similarity=0.089 Sum_probs=63.4
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCChhhH-Hh----h--ccCceeeEEE
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETAL-MI----L--TTLKNYTHLL 128 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~-~~----~--~~~d~v~~~~ 128 (364)
..+++|||+| +|.||..+++.+...|++|++++|++++.+.+.+.+... ..|..+.++ .. . .++|.+++++
T Consensus 139 ~~g~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~D~vi~~~ 217 (327)
T 1qor_A 139 KPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALKAGAWQ-VINYREEDLVERLKEITGGKKVRVVYDSV 217 (327)
T ss_dssp CTTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHTCSE-EEETTTSCHHHHHHHHTTTCCEEEEEECS
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCE-EEECCCccHHHHHHHHhCCCCceEEEECC
Confidence 3467999999 899999999999999999999999887766655444443 246655443 11 1 2477777766
Q ss_pred EecCCCCCCCChhhhHHHHHHHHhhcCCccEEEEEcc
Q 017914 129 VSIPPLEGTGDPMLKHGELLRSTLMNGHLQWLGYLSS 165 (364)
Q Consensus 129 ~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~r~v~~Ss 165 (364)
+. ......+..++..| ++|.+++
T Consensus 218 g~------------~~~~~~~~~l~~~G--~iv~~g~ 240 (327)
T 1qor_A 218 GR------------DTWERSLDCLQRRG--LMVSFGN 240 (327)
T ss_dssp CG------------GGHHHHHHTEEEEE--EEEECCC
T ss_pred ch------------HHHHHHHHHhcCCC--EEEEEec
Confidence 31 12334455555544 7887765
|
| >1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=97.38 E-value=0.00038 Score=62.61 Aligned_cols=94 Identities=20% Similarity=0.187 Sum_probs=63.4
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCChhhH-H----hh--ccCceeeEEE
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETAL-M----IL--TTLKNYTHLL 128 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~-~----~~--~~~d~v~~~~ 128 (364)
..+.+|||+| +|.+|..+++.+...|++|++++|++++.+.+.+.+... ..|..+.++ . .. .++|.|++++
T Consensus 169 ~~g~~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga~~-~~d~~~~~~~~~~~~~~~~~~~D~vi~~~ 247 (351)
T 1yb5_A 169 KAGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIVLQNGAHE-VFNHREVNYIDKIKKYVGEKGIDIIIEML 247 (351)
T ss_dssp CTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSE-EEETTSTTHHHHHHHHHCTTCEEEEEESC
T ss_pred CCcCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHcCCCE-EEeCCCchHHHHHHHHcCCCCcEEEEECC
Confidence 3467999999 799999999999999999999999988776665555543 246655443 1 12 2578888776
Q ss_pred EecCCCCCCCChhhhHHHHHHHHhhcCCccEEEEEcc
Q 017914 129 VSIPPLEGTGDPMLKHGELLRSTLMNGHLQWLGYLSS 165 (364)
Q Consensus 129 ~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~r~v~~Ss 165 (364)
+. ......+..++..| ++|.++.
T Consensus 248 G~------------~~~~~~~~~l~~~G--~iv~~g~ 270 (351)
T 1yb5_A 248 AN------------VNLSKDLSLLSHGG--RVIVVGS 270 (351)
T ss_dssp HH------------HHHHHHHHHEEEEE--EEEECCC
T ss_pred Ch------------HHHHHHHHhccCCC--EEEEEec
Confidence 42 11223344555443 7887653
|
| >2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=97.38 E-value=0.00031 Score=63.11 Aligned_cols=95 Identities=15% Similarity=0.083 Sum_probs=62.1
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCCh-hhH-Hhh-----ccCceeeEEE
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANE-TAL-MIL-----TTLKNYTHLL 128 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~-~~~-~~~-----~~~d~v~~~~ 128 (364)
..+++|||+| +|.||..+++.+...|++|++++|++++.+.+.+.+... ..|+.+ .++ ..+ .++|.|++++
T Consensus 168 ~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~~~~~~~g~~~-~~d~~~~~~~~~~~~~~~~~~~D~vi~~~ 246 (347)
T 2hcy_A 168 MAGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELFRSIGGEV-FIDFTKEKDIVGAVLKATDGGAHGVINVS 246 (347)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTTHHHHHHHTTCCE-EEETTTCSCHHHHHHHHHTSCEEEEEECS
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHHHHHHHHHcCCce-EEecCccHhHHHHHHHHhCCCCCEEEECC
Confidence 4567999999 799999999999999999999999887766555555543 247663 222 222 1567777765
Q ss_pred EecCCCCCCCChhhhHHHHHHHHhhcCCccEEEEEcc
Q 017914 129 VSIPPLEGTGDPMLKHGELLRSTLMNGHLQWLGYLSS 165 (364)
Q Consensus 129 ~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~r~v~~Ss 165 (364)
+. .......+..++..| ++|.+++
T Consensus 247 g~-----------~~~~~~~~~~l~~~G--~iv~~g~ 270 (347)
T 2hcy_A 247 VS-----------EAAIEASTRYVRANG--TTVLVGM 270 (347)
T ss_dssp SC-----------HHHHHHHTTSEEEEE--EEEECCC
T ss_pred Cc-----------HHHHHHHHHHHhcCC--EEEEEeC
Confidence 31 112233334444433 7887765
|
| >1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A* | Back alignment and structure |
|---|
Probab=97.38 E-value=0.00071 Score=62.70 Aligned_cols=41 Identities=29% Similarity=0.473 Sum_probs=37.0
Q ss_pred CeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhh
Q 017914 60 NRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQ 100 (364)
Q Consensus 60 ~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~ 100 (364)
|+|.|+|+|++|..++..|.+.|++|++++|++++.+.+.+
T Consensus 1 mkI~VIG~G~vG~~~A~~la~~G~~V~~~d~~~~~~~~l~~ 41 (436)
T 1mv8_A 1 MRISIFGLGYVGAVCAGCLSARGHEVIGVDVSSTKIDLINQ 41 (436)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHT
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHhC
Confidence 58999999999999999999999999999999887766654
|
| >4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=97.37 E-value=0.00049 Score=60.92 Aligned_cols=64 Identities=8% Similarity=0.035 Sum_probs=47.4
Q ss_pred CCCeEEEEcCChhhHHHHHHHHhCC-CEEEEEEeCc-------hhhhhhhhCCceEEEc-cCChhhHHhhccCceeeEEE
Q 017914 58 SPNRMLILGMGFVGRIFAEKIKNQG-WVVSGTCTNV-------MKKKELEQSGFDVHLF-NANETALMILTTLKNYTHLL 128 (364)
Q Consensus 58 ~~~~vlVtGtG~iG~~l~~~L~~~g-~~V~~~~r~~-------~~~~~l~~~~~~~~~~-D~~~~~~~~~~~~d~v~~~~ 128 (364)
++|+|.|+|.|.+|..++..|.+.| ++|++.+|++ +..+.+...++ .. |.. +.++++|.|+-++
T Consensus 23 M~m~IgvIG~G~mG~~lA~~L~~~G~~~V~~~dr~~~~~~~~~~~~~~~~~~g~---~~~s~~----e~~~~aDvVi~av 95 (317)
T 4ezb_A 23 MMTTIAFIGFGEAAQSIAGGLGGRNAARLAAYDLRFNDPAASGALRARAAELGV---EPLDDV----AGIACADVVLSLV 95 (317)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTTTCSEEEEECGGGGCTTTHHHHHHHHHHTTC---EEESSG----GGGGGCSEEEECC
T ss_pred cCCeEEEECccHHHHHHHHHHHHcCCCeEEEEeCCCccccchHHHHHHHHHCCC---CCCCHH----HHHhcCCEEEEec
Confidence 5689999999999999999999999 9999999987 23333333454 11 221 4567788877765
|
| >2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=97.34 E-value=0.00027 Score=63.38 Aligned_cols=94 Identities=14% Similarity=0.012 Sum_probs=64.3
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCChhhH-H----hh--ccCceeeEEE
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETAL-M----IL--TTLKNYTHLL 128 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~-~----~~--~~~d~v~~~~ 128 (364)
..+++|||+| +|.+|..+++.+...|++|++++|++++.+.+.+.+...+ .|..+.++ + .. .++|.|++++
T Consensus 165 ~~g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~~ga~~~-~d~~~~~~~~~~~~~~~~~~~d~vi~~~ 243 (343)
T 2eih_A 165 RPGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRRAKALGADET-VNYTHPDWPKEVRRLTGGKGADKVVDHT 243 (343)
T ss_dssp CTTCEEEECSTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHTCSEE-EETTSTTHHHHHHHHTTTTCEEEEEESS
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcCCCEE-EcCCcccHHHHHHHHhCCCCceEEEECC
Confidence 3467999999 7999999999999999999999998887766654454432 46665443 1 11 2577777766
Q ss_pred EecCCCCCCCChhhhHHHHHHHHhhcCCccEEEEEcc
Q 017914 129 VSIPPLEGTGDPMLKHGELLRSTLMNGHLQWLGYLSS 165 (364)
Q Consensus 129 ~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~r~v~~Ss 165 (364)
+. ......+..++..| ++|.+++
T Consensus 244 g~------------~~~~~~~~~l~~~G--~~v~~g~ 266 (343)
T 2eih_A 244 GA------------LYFEGVIKATANGG--RIAIAGA 266 (343)
T ss_dssp CS------------SSHHHHHHHEEEEE--EEEESSC
T ss_pred CH------------HHHHHHHHhhccCC--EEEEEec
Confidence 41 11334455555544 7887765
|
| >4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A* | Back alignment and structure |
|---|
Probab=97.33 E-value=0.00026 Score=63.26 Aligned_cols=95 Identities=17% Similarity=0.192 Sum_probs=64.5
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhh-hhCCceEEEccCChhhH-Hhh-----ccCceeeEEE
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKEL-EQSGFDVHLFNANETAL-MIL-----TTLKNYTHLL 128 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l-~~~~~~~~~~D~~~~~~-~~~-----~~~d~v~~~~ 128 (364)
..+++|||+| +|.||..+++.+...|++|++++|++++.+.+ .+.+...+ .|..+.++ ..+ .++|.|++++
T Consensus 148 ~~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~d~vi~~~ 226 (336)
T 4b7c_A 148 KNGETVVISGAAGAVGSVAGQIARLKGCRVVGIAGGAEKCRFLVEELGFDGA-IDYKNEDLAAGLKRECPKGIDVFFDNV 226 (336)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCCSEE-EETTTSCHHHHHHHHCTTCEEEEEESS
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCCEE-EECCCHHHHHHHHHhcCCCceEEEECC
Confidence 4568999999 79999999999999999999999998887776 55565432 45555443 211 3477777765
Q ss_pred EecCCCCCCCChhhhHHHHHHHHhhcCCccEEEEEccc
Q 017914 129 VSIPPLEGTGDPMLKHGELLRSTLMNGHLQWLGYLSST 166 (364)
Q Consensus 129 ~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~r~v~~Ss~ 166 (364)
+. ......+..++..| ++|.++..
T Consensus 227 g~------------~~~~~~~~~l~~~G--~iv~~G~~ 250 (336)
T 4b7c_A 227 GG------------EILDTVLTRIAFKA--RIVLCGAI 250 (336)
T ss_dssp CH------------HHHHHHHTTEEEEE--EEEECCCG
T ss_pred Cc------------chHHHHHHHHhhCC--EEEEEeec
Confidence 31 12333444454443 78877654
|
| >4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP} | Back alignment and structure |
|---|
Probab=97.31 E-value=0.00053 Score=60.82 Aligned_cols=67 Identities=15% Similarity=0.247 Sum_probs=52.7
Q ss_pred CCCCeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCChhhHHhhccCceeeEEE
Q 017914 57 QSPNRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETALMILTTLKNYTHLL 128 (364)
Q Consensus 57 ~~~~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~~~~~~~d~v~~~~ 128 (364)
..+|+|.|+|.|.+|..+++.|.+.|++|++.+|++++.+.+.+.++... .+.+ +.+.++|.|+-++
T Consensus 29 ~~~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~l~~~g~~~~----~~~~-e~~~~aDvVi~~v 95 (320)
T 4dll_A 29 PYARKITFLGTGSMGLPMARRLCEAGYALQVWNRTPARAASLAALGATIH----EQAR-AAARDADIVVSML 95 (320)
T ss_dssp CCCSEEEEECCTTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTTCEEE----SSHH-HHHTTCSEEEECC
T ss_pred cCCCEEEEECccHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHHCCCEee----CCHH-HHHhcCCEEEEEC
Confidence 34689999999999999999999999999999999988777765555332 1222 5667888888765
|
| >3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens} | Back alignment and structure |
|---|
Probab=97.30 E-value=0.0005 Score=59.93 Aligned_cols=64 Identities=17% Similarity=0.254 Sum_probs=50.7
Q ss_pred CeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCChhhHHhhccCceeeEEE
Q 017914 60 NRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETALMILTTLKNYTHLL 128 (364)
Q Consensus 60 ~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~~~~~~~d~v~~~~ 128 (364)
|+|.|+|.|.+|..+++.|.+.|++|++.+|++++.+.+.+.++... .+.+ +.+.++|.|+.+.
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~----~~~~-~~~~~aDvvi~~v 65 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKAGCSVTIWNRSPEKAEELAALGAERA----ATPC-EVVESCPVTFAML 65 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSGGGGHHHHHTTCEEC----SSHH-HHHHHCSEEEECC
T ss_pred CEEEEEeecHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHCCCeec----CCHH-HHHhcCCEEEEEc
Confidence 78999999999999999999999999999999988777765555321 1222 4567788887765
|
| >1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6 | Back alignment and structure |
|---|
Probab=97.30 E-value=0.00038 Score=61.04 Aligned_cols=65 Identities=14% Similarity=0.270 Sum_probs=49.9
Q ss_pred CCeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCChhhHHhhccCceeeEEE
Q 017914 59 PNRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETALMILTTLKNYTHLL 128 (364)
Q Consensus 59 ~~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~~~~~~~d~v~~~~ 128 (364)
+|+|.|+|+|.+|..++..|.+.|++|++.+|++++.+.+.+.++.. ..+.+ +.+.++|.|+.+.
T Consensus 5 ~m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~----~~~~~-~~~~~~D~vi~~v 69 (299)
T 1vpd_A 5 TMKVGFIGLGIMGKPMSKNLLKAGYSLVVSDRNPEAIADVIAAGAET----ASTAK-AIAEQCDVIITML 69 (299)
T ss_dssp -CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEE----CSSHH-HHHHHCSEEEECC
T ss_pred cceEEEECchHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHCCCee----cCCHH-HHHhCCCEEEEEC
Confidence 47999999999999999999999999999999988777665555432 12222 4566788888765
|
| >1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP} | Back alignment and structure |
|---|
Probab=97.30 E-value=0.0003 Score=62.79 Aligned_cols=94 Identities=15% Similarity=0.090 Sum_probs=63.0
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCChhhH-H----hh--ccCceeeEEE
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETAL-M----IL--TTLKNYTHLL 128 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~-~----~~--~~~d~v~~~~ 128 (364)
..+.+|||+| +|.||..+++.+...|++|++++|++++.+.+.+.+... ..|..+.+. + .. .++|.+++++
T Consensus 144 ~~g~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~~g~~~-~~d~~~~~~~~~i~~~~~~~~~d~vi~~~ 222 (333)
T 1wly_A 144 KPGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTEEKAETARKLGCHH-TINYSTQDFAEVVREITGGKGVDVVYDSI 222 (333)
T ss_dssp CTTCEEEETTTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHTCSE-EEETTTSCHHHHHHHHHTTCCEEEEEECS
T ss_pred CCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCCE-EEECCCHHHHHHHHHHhCCCCCeEEEECC
Confidence 3467999999 899999999999999999999999987766555444442 246655432 1 11 2578777766
Q ss_pred EecCCCCCCCChhhhHHHHHHHHhhcCCccEEEEEcc
Q 017914 129 VSIPPLEGTGDPMLKHGELLRSTLMNGHLQWLGYLSS 165 (364)
Q Consensus 129 ~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~r~v~~Ss 165 (364)
+. ......+..++..| ++|.++.
T Consensus 223 g~------------~~~~~~~~~l~~~G--~iv~~g~ 245 (333)
T 1wly_A 223 GK------------DTLQKSLDCLRPRG--MCAAYGH 245 (333)
T ss_dssp CT------------TTHHHHHHTEEEEE--EEEECCC
T ss_pred cH------------HHHHHHHHhhccCC--EEEEEec
Confidence 41 11234445555544 7887764
|
| >3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp} | Back alignment and structure |
|---|
Probab=97.27 E-value=0.00072 Score=59.68 Aligned_cols=66 Identities=12% Similarity=0.141 Sum_probs=48.4
Q ss_pred CCCeEEEEcCChhhHHHHHHHHhCCC-EEEEEEeC--chhhhhhhhCCceEEEccCChhhHHhhccCceeeEEE
Q 017914 58 SPNRMLILGMGFVGRIFAEKIKNQGW-VVSGTCTN--VMKKKELEQSGFDVHLFNANETALMILTTLKNYTHLL 128 (364)
Q Consensus 58 ~~~~vlVtGtG~iG~~l~~~L~~~g~-~V~~~~r~--~~~~~~l~~~~~~~~~~D~~~~~~~~~~~~d~v~~~~ 128 (364)
.+|+|.|+|.|.+|..+++.|.+.|+ +|++.+|+ ++..+.+.+.++... .+.. +.+.++|.|+-++
T Consensus 23 ~~~~I~iIG~G~mG~~~A~~L~~~G~~~V~~~dr~~~~~~~~~~~~~g~~~~----~~~~-e~~~~aDvVi~~v 91 (312)
T 3qsg_A 23 NAMKLGFIGFGEAASAIASGLRQAGAIDMAAYDAASAESWRPRAEELGVSCK----ASVA-EVAGECDVIFSLV 91 (312)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHHSCCEEEEECSSCHHHHHHHHHHTTCEEC----SCHH-HHHHHCSEEEECS
T ss_pred CCCEEEEECccHHHHHHHHHHHHCCCCeEEEEcCCCCHHHHHHHHHCCCEEe----CCHH-HHHhcCCEEEEec
Confidence 46899999999999999999999999 99999996 455555554554431 1222 4567788888765
|
| >2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A* | Back alignment and structure |
|---|
Probab=97.26 E-value=0.00045 Score=62.27 Aligned_cols=92 Identities=18% Similarity=0.211 Sum_probs=62.0
Q ss_pred CeEEEEc-CChhhHHHHHHHHhCCC-EEEEEEeCchhhhhhhh-CCceEEEccCChhhH-Hhh-----ccCceeeEEEEe
Q 017914 60 NRMLILG-MGFVGRIFAEKIKNQGW-VVSGTCTNVMKKKELEQ-SGFDVHLFNANETAL-MIL-----TTLKNYTHLLVS 130 (364)
Q Consensus 60 ~~vlVtG-tG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~l~~-~~~~~~~~D~~~~~~-~~~-----~~~d~v~~~~~~ 130 (364)
++|||+| +|.||..+++.+...|+ +|+++++++++.+.+.+ .+... ..|..+.+. ..+ .++|.++++++.
T Consensus 162 ~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~~~~~~~g~~~-~~d~~~~~~~~~~~~~~~~~~d~vi~~~G~ 240 (357)
T 2zb4_A 162 KTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSELGFDA-AINYKKDNVAEQLRESCPAGVDVYFDNVGG 240 (357)
T ss_dssp CEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTSCCSE-EEETTTSCHHHHHHHHCTTCEEEEEESCCH
T ss_pred cEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcCCce-EEecCchHHHHHHHHhcCCCCCEEEECCCH
Confidence 8999999 79999999999999999 99999998877666554 45543 346655433 222 147777776641
Q ss_pred cCCCCCCCChhhhHHHHHHHHhhcCCccEEEEEccc
Q 017914 131 IPPLEGTGDPMLKHGELLRSTLMNGHLQWLGYLSST 166 (364)
Q Consensus 131 ~~~~~~~~~~~~~~~~~l~~a~~~~~~~r~v~~Ss~ 166 (364)
......+..++..| ++|.++..
T Consensus 241 ------------~~~~~~~~~l~~~G--~iv~~G~~ 262 (357)
T 2zb4_A 241 ------------NISDTVISQMNENS--HIILCGQI 262 (357)
T ss_dssp ------------HHHHHHHHTEEEEE--EEEECCCG
T ss_pred ------------HHHHHHHHHhccCc--EEEEECCc
Confidence 12334445555443 78877653
|
| >3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium} | Back alignment and structure |
|---|
Probab=97.26 E-value=0.00015 Score=56.22 Aligned_cols=68 Identities=12% Similarity=0.187 Sum_probs=50.1
Q ss_pred CCeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhh-CCceEEEccCChhhHHhhccCceeeEEEE
Q 017914 59 PNRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQ-SGFDVHLFNANETALMILTTLKNYTHLLV 129 (364)
Q Consensus 59 ~~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~-~~~~~~~~D~~~~~~~~~~~~d~v~~~~~ 129 (364)
+++|+|+|+|.+|+.+++.|.+.|++|++.+|+.++...+.. .+.... +..+.. ..+.++|.|+.+..
T Consensus 21 ~~~v~iiG~G~iG~~~a~~l~~~g~~v~v~~r~~~~~~~~a~~~~~~~~--~~~~~~-~~~~~~Divi~at~ 89 (144)
T 3oj0_A 21 GNKILLVGNGMLASEIAPYFSYPQYKVTVAGRNIDHVRAFAEKYEYEYV--LINDID-SLIKNNDVIITATS 89 (144)
T ss_dssp CCEEEEECCSHHHHHHGGGCCTTTCEEEEEESCHHHHHHHHHHHTCEEE--ECSCHH-HHHHTCSEEEECSC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHHhCCceE--eecCHH-HHhcCCCEEEEeCC
Confidence 689999999999999999999999999999999887665432 233322 222222 45678898887654
|
| >3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A* | Back alignment and structure |
|---|
Probab=97.26 E-value=0.001 Score=58.45 Aligned_cols=72 Identities=14% Similarity=0.131 Sum_probs=52.8
Q ss_pred CCCCeEEEEcCChhhHHHHHHHHhCCC-EEEEEEeC---chhhhhhhh-----CCceEEEccCChhh-H-HhhccCceee
Q 017914 57 QSPNRMLILGMGFVGRIFAEKIKNQGW-VVSGTCTN---VMKKKELEQ-----SGFDVHLFNANETA-L-MILTTLKNYT 125 (364)
Q Consensus 57 ~~~~~vlVtGtG~iG~~l~~~L~~~g~-~V~~~~r~---~~~~~~l~~-----~~~~~~~~D~~~~~-~-~~~~~~d~v~ 125 (364)
..++++||+|+|.+|+.++..|.+.|. +|++.+|+ .++...+.+ .+..+...++.+.+ + ..+.++|.|+
T Consensus 152 l~gk~~lVlGaGG~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~la~~~~~~~~~~~~~~~~~~~~~l~~~l~~aDiII 231 (315)
T 3tnl_A 152 IIGKKMTICGAGGAATAICIQAALDGVKEISIFNRKDDFYANAEKTVEKINSKTDCKAQLFDIEDHEQLRKEIAESVIFT 231 (315)
T ss_dssp CTTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHHTCSEEE
T ss_pred ccCCEEEEECCChHHHHHHHHHHHCCCCEEEEEECCCchHHHHHHHHHHhhhhcCCceEEeccchHHHHHhhhcCCCEEE
Confidence 457899999999999999999999998 89999999 666554431 23334445555532 3 5567888888
Q ss_pred EEE
Q 017914 126 HLL 128 (364)
Q Consensus 126 ~~~ 128 (364)
++.
T Consensus 232 NaT 234 (315)
T 3tnl_A 232 NAT 234 (315)
T ss_dssp ECS
T ss_pred ECc
Confidence 765
|
| >3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens} | Back alignment and structure |
|---|
Probab=97.25 E-value=0.0003 Score=61.40 Aligned_cols=65 Identities=20% Similarity=0.185 Sum_probs=50.6
Q ss_pred CCeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCChhhHHhhccCceeeEEE
Q 017914 59 PNRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETALMILTTLKNYTHLL 128 (364)
Q Consensus 59 ~~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~~~~~~~d~v~~~~ 128 (364)
||+|.|+|.|.+|..+++.|.+.||+|++.+|++++.+.+.+.++... .+.+ +.+.++|.|+.+.
T Consensus 1 M~~I~iiG~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~----~~~~-~~~~~advvi~~v 65 (287)
T 3pdu_A 1 MTTYGFLGLGIMGGPMAANLVRAGFDVTVWNRNPAKCAPLVALGARQA----SSPA-EVCAACDITIAML 65 (287)
T ss_dssp CCCEEEECCSTTHHHHHHHHHHHTCCEEEECSSGGGGHHHHHHTCEEC----SCHH-HHHHHCSEEEECC
T ss_pred CCeEEEEccCHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHCCCeec----CCHH-HHHHcCCEEEEEc
Confidence 478999999999999999999999999999999988777655554321 1222 4566788887765
|
| >3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP} | Back alignment and structure |
|---|
Probab=97.25 E-value=0.00054 Score=59.69 Aligned_cols=65 Identities=17% Similarity=0.227 Sum_probs=49.7
Q ss_pred CCCeEEEEcC-ChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCChhhHHhhccCceeeEEE
Q 017914 58 SPNRMLILGM-GFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETALMILTTLKNYTHLL 128 (364)
Q Consensus 58 ~~~~vlVtGt-G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~~~~~~~d~v~~~~ 128 (364)
++|+|.|+|. |.+|+.+++.|.+.|++|++.+|+++..+.+...++. ..+.. ..+.++|.|+.++
T Consensus 10 mmm~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~g~~-----~~~~~-~~~~~aDvVi~av 75 (286)
T 3c24_A 10 GPKTVAILGAGGKMGARITRKIHDSAHHLAAIEIAPEGRDRLQGMGIP-----LTDGD-GWIDEADVVVLAL 75 (286)
T ss_dssp CCCEEEEETTTSHHHHHHHHHHHHSSSEEEEECCSHHHHHHHHHTTCC-----CCCSS-GGGGTCSEEEECS
T ss_pred cCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHhcCCC-----cCCHH-HHhcCCCEEEEcC
Confidence 3579999995 9999999999999999999999998776666544432 22222 4567889888765
|
| >4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=97.24 E-value=0.0013 Score=61.20 Aligned_cols=92 Identities=17% Similarity=0.179 Sum_probs=68.5
Q ss_pred CCCeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhh--CCceEEEccCChhhH---HhhccCceeeEEEEecC
Q 017914 58 SPNRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQ--SGFDVHLFNANETAL---MILTTLKNYTHLLVSIP 132 (364)
Q Consensus 58 ~~~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~--~~~~~~~~D~~~~~~---~~~~~~d~v~~~~~~~~ 132 (364)
..++|+|.|.|.+|.++++.|. ++++|.++.++.++...+.+ ++..++.||.+|.+. ..+...|.++-+..
T Consensus 234 ~~~~v~I~GgG~ig~~lA~~L~-~~~~v~iIE~d~~r~~~la~~l~~~~Vi~GD~td~~~L~ee~i~~~D~~ia~T~--- 309 (461)
T 4g65_A 234 PYRRIMIVGGGNIGASLAKRLE-QTYSVKLIERNLQRAEKLSEELENTIVFCGDAADQELLTEENIDQVDVFIALTN--- 309 (461)
T ss_dssp CCCEEEEECCSHHHHHHHHHHT-TTSEEEEEESCHHHHHHHHHHCTTSEEEESCTTCHHHHHHTTGGGCSEEEECCS---
T ss_pred cccEEEEEcchHHHHHHHHHhh-hcCceEEEecCHHHHHHHHHHCCCceEEeccccchhhHhhcCchhhcEEEEccc---
Confidence 4579999999999999999975 56999999999888777654 578899999999885 44567777666542
Q ss_pred CCCCCCChhhhHHHHHHHH--hhcCCccEEEEE
Q 017914 133 PLEGTGDPMLKHGELLRST--LMNGHLQWLGYL 163 (364)
Q Consensus 133 ~~~~~~~~~~~~~~~l~~a--~~~~~~~r~v~~ 163 (364)
+ . ..|++.+ +++.|+++.|-.
T Consensus 310 ------~--D--e~Ni~~~llAk~~gv~kvIa~ 332 (461)
T 4g65_A 310 ------E--D--ETNIMSAMLAKRMGAKKVMVL 332 (461)
T ss_dssp ------C--H--HHHHHHHHHHHHTTCSEEEEE
T ss_pred ------C--c--HHHHHHHHHHHHcCCcccccc
Confidence 1 1 2344333 457788888743
|
| >2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A* | Back alignment and structure |
|---|
Probab=97.24 E-value=0.00044 Score=62.26 Aligned_cols=94 Identities=15% Similarity=0.009 Sum_probs=63.0
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCChhhH-Hh----h--ccCceeeEEE
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETAL-MI----L--TTLKNYTHLL 128 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~-~~----~--~~~d~v~~~~ 128 (364)
..+.+|||+| +|.||..+++.+...|++|++++|++++.+.+.+.+... ..|..+.++ +. . .++|.+++++
T Consensus 161 ~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~d~vi~~~ 239 (354)
T 2j8z_A 161 QAGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMAEKLGAAA-GFNYKKEDFSEATLKFTKGAGVNLILDCI 239 (354)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTCSE-EEETTTSCHHHHHHHHTTTSCEEEEEESS
T ss_pred CCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCcE-EEecCChHHHHHHHHHhcCCCceEEEECC
Confidence 3467999999 899999999999999999999999887766655445442 246555433 11 1 2577777776
Q ss_pred EecCCCCCCCChhhhHHHHHHHHhhcCCccEEEEEcc
Q 017914 129 VSIPPLEGTGDPMLKHGELLRSTLMNGHLQWLGYLSS 165 (364)
Q Consensus 129 ~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~r~v~~Ss 165 (364)
+. . .....+..++..| ++|.++.
T Consensus 240 G~---------~---~~~~~~~~l~~~G--~iv~~G~ 262 (354)
T 2j8z_A 240 GG---------S---YWEKNVNCLALDG--RWVLYGL 262 (354)
T ss_dssp CG---------G---GHHHHHHHEEEEE--EEEECCC
T ss_pred Cc---------h---HHHHHHHhccCCC--EEEEEec
Confidence 42 1 1233445555443 7887664
|
| >1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A* | Back alignment and structure |
|---|
Probab=97.23 E-value=0.00041 Score=59.82 Aligned_cols=32 Identities=22% Similarity=0.282 Sum_probs=26.6
Q ss_pred CCeEEEEc-CChhhHHHHHHHHh-CCCEEEEEEe
Q 017914 59 PNRMLILG-MGFVGRIFAEKIKN-QGWVVSGTCT 90 (364)
Q Consensus 59 ~~~vlVtG-tG~iG~~l~~~L~~-~g~~V~~~~r 90 (364)
+|+|.|+| +|.+|+.+++.+.+ .|++++++..
T Consensus 5 ~mkV~V~Ga~G~mG~~~~~~~~~~~~~elva~~d 38 (273)
T 1dih_A 5 NIRVAIAGAGGRMGRQLIQAALALEGVQLGAALE 38 (273)
T ss_dssp BEEEEETTTTSHHHHHHHHHHHHSTTEECCCEEC
T ss_pred CcEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEe
Confidence 47999999 79999999998875 5788886544
|
| >3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=97.23 E-value=0.00041 Score=60.78 Aligned_cols=64 Identities=13% Similarity=0.114 Sum_probs=50.5
Q ss_pred CCeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCChhhHHhhccCceeeEEE
Q 017914 59 PNRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETALMILTTLKNYTHLL 128 (364)
Q Consensus 59 ~~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~~~~~~~d~v~~~~ 128 (364)
+|+|.|+|.|.+|..+++.|.+.||+|++.+|++++.+.+.+.++... .+.+ +..+ +|.|+.+.
T Consensus 15 ~~~I~vIG~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~----~~~~-~~~~-aDvvi~~v 78 (296)
T 3qha_A 15 QLKLGYIGLGNMGAPMATRMTEWPGGVTVYDIRIEAMTPLAEAGATLA----DSVA-DVAA-ADLIHITV 78 (296)
T ss_dssp CCCEEEECCSTTHHHHHHHHTTSTTCEEEECSSTTTSHHHHHTTCEEC----SSHH-HHTT-SSEEEECC
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHCCCEEc----CCHH-HHHh-CCEEEEEC
Confidence 579999999999999999999999999999999988777766665431 2222 4556 88888765
|
| >3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A | Back alignment and structure |
|---|
Probab=97.22 E-value=0.00088 Score=58.07 Aligned_cols=71 Identities=13% Similarity=0.123 Sum_probs=52.1
Q ss_pred CCCCeEEEEcCChhhHHHHHHHHhCCC-EEEEEEeCchhhhhhhh------CCceEEEccCChhhHHhhccCceeeEEE
Q 017914 57 QSPNRMLILGMGFVGRIFAEKIKNQGW-VVSGTCTNVMKKKELEQ------SGFDVHLFNANETALMILTTLKNYTHLL 128 (364)
Q Consensus 57 ~~~~~vlVtGtG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~l~~------~~~~~~~~D~~~~~~~~~~~~d~v~~~~ 128 (364)
..+++++|+|+|.+|+.++..|.+.|. +|++.+|+.++.+.+.+ .++.+...++.+.. ..+.++|.|+++.
T Consensus 125 l~~k~vlVlGaGG~g~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~i~~~~~~~l~-~~l~~~DiVInaT 202 (283)
T 3jyo_A 125 AKLDSVVQVGAGGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVVGVDARGIE-DVIAAADGVVNAT 202 (283)
T ss_dssp CCCSEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHHTSCCEEEECSTTHH-HHHHHSSEEEECS
T ss_pred cCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEcCHHHHH-HHHhcCCEEEECC
Confidence 456899999999999999999999998 79999999887665432 12334444443322 4566788888765
|
| >3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri} | Back alignment and structure |
|---|
Probab=97.22 E-value=0.00056 Score=60.00 Aligned_cols=65 Identities=12% Similarity=0.138 Sum_probs=49.8
Q ss_pred CCeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCChhhHHhhccCceeeEEE
Q 017914 59 PNRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETALMILTTLKNYTHLL 128 (364)
Q Consensus 59 ~~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~~~~~~~d~v~~~~ 128 (364)
+|+|.|+|.|.+|..++..|.+.|++|++.+|++++...+.+.++.. ..+.+ +.+.++|.|+.+.
T Consensus 4 ~~~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~----~~~~~-~~~~~~D~vi~~v 68 (301)
T 3cky_A 4 SIKIGFIGLGAMGKPMAINLLKEGVTVYAFDLMEANVAAVVAQGAQA----CENNQ-KVAAASDIIFTSL 68 (301)
T ss_dssp CCEEEEECCCTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHTTTCEE----CSSHH-HHHHHCSEEEECC
T ss_pred CCEEEEECccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHCCCee----cCCHH-HHHhCCCEEEEEC
Confidence 47999999999999999999999999999999988776665555432 11222 4556788877765
|
| >3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A* | Back alignment and structure |
|---|
Probab=97.22 E-value=0.0021 Score=56.68 Aligned_cols=68 Identities=21% Similarity=0.189 Sum_probs=51.1
Q ss_pred CCCCeEEEEcCChhhHHHHHHHHhCCC--EEEEEEeCchhhhhhhhCCce-EEEccCChhhHH-hhccCceeeEEE
Q 017914 57 QSPNRMLILGMGFVGRIFAEKIKNQGW--VVSGTCTNVMKKKELEQSGFD-VHLFNANETALM-ILTTLKNYTHLL 128 (364)
Q Consensus 57 ~~~~~vlVtGtG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~l~~~~~~-~~~~D~~~~~~~-~~~~~d~v~~~~ 128 (364)
.+.|+|.|+|.|.+|..+++.|.+.|+ +|++.+|+++..+...+.++. ....|+ + . .+.++|.|+.++
T Consensus 31 ~~~~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~~~~~~a~~~G~~~~~~~~~---~-~~~~~~aDvVilav 102 (314)
T 3ggo_A 31 LSMQNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTSI---A-KVEDFSPDFVMLSS 102 (314)
T ss_dssp CSCSEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEESCT---T-GGGGGCCSEEEECS
T ss_pred cCCCEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHCCCcchhcCCH---H-HHhhccCCEEEEeC
Confidence 345799999999999999999999999 999999998776665544542 111222 1 4 577889888765
|
| >3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum} | Back alignment and structure |
|---|
Probab=97.19 E-value=0.0012 Score=60.68 Aligned_cols=74 Identities=18% Similarity=0.135 Sum_probs=52.9
Q ss_pred CCCCeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCCh---------------hhHHhhccC
Q 017914 57 QSPNRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANE---------------TALMILTTL 121 (364)
Q Consensus 57 ~~~~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~---------------~~~~~~~~~ 121 (364)
..|.+|.|+|.|++|-.++..|.+.||+|++++.++++.+.+.+....++.-++.+ ....++..+
T Consensus 19 ~~m~~IaViGlGYVGLp~A~~~A~~G~~V~g~Did~~kV~~ln~G~~pi~Epgl~ell~~~~~~g~l~~tt~~~~ai~~a 98 (444)
T 3vtf_A 19 SHMASLSVLGLGYVGVVHAVGFALLGHRVVGYDVNPSIVERLRAGRPHIYEPGLEEALGRALSSGRLSFAESAEEAVAAT 98 (444)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHHTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEECSSHHHHHHTS
T ss_pred CCCCEEEEEccCHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHCCCCCCCCCCHHHHHHHHHHcCCeeEEcCHHHHHhcC
Confidence 45679999999999999999999999999999999988777764333322222111 001346677
Q ss_pred ceeeEEEEe
Q 017914 122 KNYTHLLVS 130 (364)
Q Consensus 122 d~v~~~~~~ 130 (364)
|+++.++..
T Consensus 99 d~~~I~VpT 107 (444)
T 3vtf_A 99 DATFIAVGT 107 (444)
T ss_dssp SEEEECCCC
T ss_pred CceEEEecC
Confidence 888877654
|
| >2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A* | Back alignment and structure |
|---|
Probab=97.19 E-value=0.00064 Score=61.42 Aligned_cols=95 Identities=18% Similarity=0.158 Sum_probs=65.0
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCChhhH-Hhh-----ccCceeeEEEE
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETAL-MIL-----TTLKNYTHLLV 129 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~-~~~-----~~~d~v~~~~~ 129 (364)
..+.+|||+| +|.+|..+++.+...|++|+++++++++.+.+.+.+...+ .|..+.++ +.+ .++|.|+++++
T Consensus 162 ~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~Ga~~~-~~~~~~~~~~~~~~~~~~g~D~vid~~g 240 (362)
T 2c0c_A 162 SEGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLKSLGCDRP-INYKTEPVGTVLKQEYPEGVDVVYESVG 240 (362)
T ss_dssp CTTCEEEETTTTBTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSEE-EETTTSCHHHHHHHHCTTCEEEEEECSC
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHcCCcEE-EecCChhHHHHHHHhcCCCCCEEEECCC
Confidence 3467999999 8999999999999999999999999877766665665533 34444332 111 35787777663
Q ss_pred ecCCCCCCCChhhhHHHHHHHHhhcCCccEEEEEccc
Q 017914 130 SIPPLEGTGDPMLKHGELLRSTLMNGHLQWLGYLSST 166 (364)
Q Consensus 130 ~~~~~~~~~~~~~~~~~~l~~a~~~~~~~r~v~~Ss~ 166 (364)
. ......+..++..| ++|.+++.
T Consensus 241 ~------------~~~~~~~~~l~~~G--~iv~~g~~ 263 (362)
T 2c0c_A 241 G------------AMFDLAVDALATKG--RLIVIGFI 263 (362)
T ss_dssp T------------HHHHHHHHHEEEEE--EEEECCCG
T ss_pred H------------HHHHHHHHHHhcCC--EEEEEeCC
Confidence 1 12344555555544 78887754
|
| >1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6 | Back alignment and structure |
|---|
Probab=97.19 E-value=0.00054 Score=61.73 Aligned_cols=69 Identities=14% Similarity=0.176 Sum_probs=49.0
Q ss_pred CCeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhC-CceEEEc------c---C-ChhhHHhhccCceeeEE
Q 017914 59 PNRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQS-GFDVHLF------N---A-NETALMILTTLKNYTHL 127 (364)
Q Consensus 59 ~~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~-~~~~~~~------D---~-~~~~~~~~~~~d~v~~~ 127 (364)
+|+|.|+|+|.+|..++..|.+.|++|++++|+++..+.+.+. ++.+... . . .+.+ ..+.++|.|+.+
T Consensus 4 ~mki~iiG~G~~G~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~D~vi~~ 82 (359)
T 1bg6_A 4 SKTYAVLGLGNGGHAFAAYLALKGQSVLAWDIDAQRIKEIQDRGAIIAEGPGLAGTAHPDLLTSDIG-LAVKDADVILIV 82 (359)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHTSEEEESSSCCEEECCSEEESCHH-HHHTTCSEEEEC
T ss_pred cCeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHhcCCeEEeccccccccccceecCCHH-HHHhcCCEEEEe
Confidence 4799999999999999999999999999999988776665443 3222111 0 1 1221 445678887776
Q ss_pred E
Q 017914 128 L 128 (364)
Q Consensus 128 ~ 128 (364)
+
T Consensus 83 v 83 (359)
T 1bg6_A 83 V 83 (359)
T ss_dssp S
T ss_pred C
Confidence 5
|
| >3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida} | Back alignment and structure |
|---|
Probab=97.18 E-value=0.0005 Score=60.52 Aligned_cols=67 Identities=19% Similarity=0.210 Sum_probs=51.7
Q ss_pred CCCCeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCChhhHHhhccCceeeEEE
Q 017914 57 QSPNRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETALMILTTLKNYTHLL 128 (364)
Q Consensus 57 ~~~~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~~~~~~~d~v~~~~ 128 (364)
.++|+|.|+|.|.+|..+++.|.+.|++|++.+|++++.+.+.+.++.. ..+.. +.++++|.|+.+.
T Consensus 7 ~~~~~IgiIG~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~----~~~~~-e~~~~aDvVi~~v 73 (306)
T 3l6d_A 7 SFEFDVSVIGLGAMGTIMAQVLLKQGKRVAIWNRSPGKAAALVAAGAHL----CESVK-AALSASPATIFVL 73 (306)
T ss_dssp CCSCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHTCEE----CSSHH-HHHHHSSEEEECC
T ss_pred cCCCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHCCCee----cCCHH-HHHhcCCEEEEEe
Confidence 3457999999999999999999999999999999988877665545432 12222 4567788888765
|
| >1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A* | Back alignment and structure |
|---|
Probab=97.16 E-value=0.001 Score=58.75 Aligned_cols=69 Identities=13% Similarity=0.004 Sum_probs=47.5
Q ss_pred CeEEEEc-CChhhHHHHHHHHhCC--CEEEEEEeCchhhh--hhhhCCceEEEccCCh----hhH-HhhccCceeeEEEE
Q 017914 60 NRMLILG-MGFVGRIFAEKIKNQG--WVVSGTCTNVMKKK--ELEQSGFDVHLFNANE----TAL-MILTTLKNYTHLLV 129 (364)
Q Consensus 60 ~~vlVtG-tG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~--~l~~~~~~~~~~D~~~----~~~-~~~~~~d~v~~~~~ 129 (364)
|||.|+| +|++|..++..|+..| ++|++++++..... .+.+.... .++.. .+. .+++++|.|+++++
T Consensus 1 mKI~IiGa~G~VG~~la~~L~~~~~~~ev~L~Di~~~~~~a~dL~~~~~~---~~l~~~~~t~d~~~a~~~aDvVvi~ag 77 (314)
T 1mld_A 1 AKVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVAADLSHIETR---ATVKGYLGPEQLPDCLKGCDVVVIPAG 77 (314)
T ss_dssp CEEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHHHHHHHTTSSSS---CEEEEEESGGGHHHHHTTCSEEEECCS
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCcEEEEEeCCccHHHHHHHhccCcC---ceEEEecCCCCHHHHhCCCCEEEECCC
Confidence 6899999 5999999999999888 79999999762211 22221111 11111 122 47899999999987
Q ss_pred ec
Q 017914 130 SI 131 (364)
Q Consensus 130 ~~ 131 (364)
..
T Consensus 78 ~~ 79 (314)
T 1mld_A 78 VP 79 (314)
T ss_dssp CC
T ss_pred cC
Confidence 54
|
| >1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A | Back alignment and structure |
|---|
Probab=97.16 E-value=0.00092 Score=59.76 Aligned_cols=95 Identities=15% Similarity=0.076 Sum_probs=64.5
Q ss_pred CCCCeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCChhhH-Hh----hccCceeeEEEEec
Q 017914 57 QSPNRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETAL-MI----LTTLKNYTHLLVSI 131 (364)
Q Consensus 57 ~~~~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~-~~----~~~~d~v~~~~~~~ 131 (364)
..+.+|||+|+|.+|..+++.+...|.+|++++|++++.+.+.+.++..+ .|..+.++ .. ..++|.|+++++.
T Consensus 163 ~~g~~VlV~GaG~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~lGa~~~-~d~~~~~~~~~~~~~~~~~d~vid~~g~- 240 (339)
T 1rjw_A 163 KPGEWVAIYGIGGLGHVAVQYAKAMGLNVVAVDIGDEKLELAKELGADLV-VNPLKEDAAKFMKEKVGGVHAAVVTAVS- 240 (339)
T ss_dssp CTTCEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCSEE-ECTTTSCHHHHHHHHHSSEEEEEESSCC-
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHCCCCEE-ecCCCccHHHHHHHHhCCCCEEEECCCC-
Confidence 35679999997779999999999999999999999888776666666533 46654332 11 1467877776531
Q ss_pred CCCCCCCChhhhHHHHHHHHhhcCCccEEEEEcc
Q 017914 132 PPLEGTGDPMLKHGELLRSTLMNGHLQWLGYLSS 165 (364)
Q Consensus 132 ~~~~~~~~~~~~~~~~l~~a~~~~~~~r~v~~Ss 165 (364)
.......+..++..| ++|.++.
T Consensus 241 ----------~~~~~~~~~~l~~~G--~~v~~g~ 262 (339)
T 1rjw_A 241 ----------KPAFQSAYNSIRRGG--ACVLVGL 262 (339)
T ss_dssp ----------HHHHHHHHHHEEEEE--EEEECCC
T ss_pred ----------HHHHHHHHHHhhcCC--EEEEecc
Confidence 112334455555544 7887764
|
| >4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=97.15 E-value=0.00028 Score=58.96 Aligned_cols=67 Identities=16% Similarity=0.101 Sum_probs=49.3
Q ss_pred CCCCeEEEEcCChhhHHHHHHHHhCCCEEEE-EEeCchhhhhhhh-CCceEEEccCChhhHHhhccCceeeEEE
Q 017914 57 QSPNRMLILGMGFVGRIFAEKIKNQGWVVSG-TCTNVMKKKELEQ-SGFDVHLFNANETALMILTTLKNYTHLL 128 (364)
Q Consensus 57 ~~~~~vlVtGtG~iG~~l~~~L~~~g~~V~~-~~r~~~~~~~l~~-~~~~~~~~D~~~~~~~~~~~~d~v~~~~ 128 (364)
+++|+|.|+|+|.+|..+++.|.+.|++|++ .+|++++.+.+.. .++.... | ....+.++|.|+.+.
T Consensus 21 m~mmkI~IIG~G~mG~~la~~l~~~g~~V~~v~~r~~~~~~~l~~~~g~~~~~-~----~~~~~~~aDvVilav 89 (220)
T 4huj_A 21 QSMTTYAIIGAGAIGSALAERFTAAQIPAIIANSRGPASLSSVTDRFGASVKA-V----ELKDALQADVVILAV 89 (220)
T ss_dssp GGSCCEEEEECHHHHHHHHHHHHHTTCCEEEECTTCGGGGHHHHHHHTTTEEE-C----CHHHHTTSSEEEEES
T ss_pred hcCCEEEEECCCHHHHHHHHHHHhCCCEEEEEECCCHHHHHHHHHHhCCCccc-C----hHHHHhcCCEEEEeC
Confidence 3468999999999999999999999999999 8898877666532 2333221 1 113467788887765
|
| >5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A* | Back alignment and structure |
|---|
Probab=97.14 E-value=0.0007 Score=60.11 Aligned_cols=107 Identities=14% Similarity=-0.003 Sum_probs=62.0
Q ss_pred CCeEEEEc-CChhhHHHHHHHHhCCC--E-----EEEEEeCch--hh----hhhhhCCceEE-EccCChhhHHhhccCce
Q 017914 59 PNRMLILG-MGFVGRIFAEKIKNQGW--V-----VSGTCTNVM--KK----KELEQSGFDVH-LFNANETALMILTTLKN 123 (364)
Q Consensus 59 ~~~vlVtG-tG~iG~~l~~~L~~~g~--~-----V~~~~r~~~--~~----~~l~~~~~~~~-~~D~~~~~~~~~~~~d~ 123 (364)
.++|+||| +|+||++++..|...|. + ++++++... .. ..+......+. .....+.....++++|+
T Consensus 3 ~~kV~V~GaaG~VG~~la~~L~~~~~~~e~~~~~l~L~Di~~~~~~~~g~a~DL~~~~~~~~~~~~~~~~~~~~~~daDv 82 (333)
T 5mdh_A 3 PIRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALPLLKDVIATDKEEIAFKDLDV 82 (333)
T ss_dssp CEEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCCTTEEEEEEESCHHHHTTTCSE
T ss_pred CeEEEEECCCCHHHHHHHHHHHhCCCccccCCCEEEEEeCCCccccchhhHhhhHhhhhcccCCEEEcCCcHHHhCCCCE
Confidence 37999999 89999999999998774 4 888888642 11 12322211111 11112222367899999
Q ss_pred eeEEEEecCCCCCCC-C---hhhhHHHHHHHHhhcCCcc--EEEEEcc
Q 017914 124 YTHLLVSIPPLEGTG-D---PMLKHGELLRSTLMNGHLQ--WLGYLSS 165 (364)
Q Consensus 124 v~~~~~~~~~~~~~~-~---~~~~~~~~l~~a~~~~~~~--r~v~~Ss 165 (364)
|+++++......... + ......+++..++.+.+.+ +++.+|-
T Consensus 83 VvitAg~prkpG~tR~dll~~N~~i~~~i~~~i~~~~~~~~~vivvsN 130 (333)
T 5mdh_A 83 AILVGSMPRRDGMERKDLLKANVKIFKCQGAALDKYAKKSVKVIVVGN 130 (333)
T ss_dssp EEECCSCCCCTTCCTTTTHHHHHHHHHHHHHHHHHHSCTTCEEEECSS
T ss_pred EEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCC
Confidence 999886432211111 1 1223345666667666554 4665553
|
| >1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D | Back alignment and structure |
|---|
Probab=97.13 E-value=0.00081 Score=59.04 Aligned_cols=93 Identities=16% Similarity=0.107 Sum_probs=64.1
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCCh-hhH-HhhccCceeeEEEEecCC
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANE-TAL-MILTTLKNYTHLLVSIPP 133 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~-~~~-~~~~~~d~v~~~~~~~~~ 133 (364)
..+.+|||+| +|.+|..+++.+...|.+|+++++++++.+.+.+.+...+ .|..+ .++ +.+.++|.|++ ++.
T Consensus 124 ~~g~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga~~~-~~~~~~~~~~~~~~~~d~vid-~g~--- 198 (302)
T 1iz0_A 124 RPGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPLALGAEEA-ATYAEVPERAKAWGGLDLVLE-VRG--- 198 (302)
T ss_dssp CTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHHHTTCSEE-EEGGGHHHHHHHTTSEEEEEE-CSC---
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcCCCEE-EECCcchhHHHHhcCceEEEE-CCH---
Confidence 3567999999 7999999999999999999999998887766665565433 46655 444 44467888888 642
Q ss_pred CCCCCChhhhHHHHHHHHhhcCCccEEEEEcc
Q 017914 134 LEGTGDPMLKHGELLRSTLMNGHLQWLGYLSS 165 (364)
Q Consensus 134 ~~~~~~~~~~~~~~l~~a~~~~~~~r~v~~Ss 165 (364)
......+..++..| +++.++.
T Consensus 199 ---------~~~~~~~~~l~~~G--~~v~~g~ 219 (302)
T 1iz0_A 199 ---------KEVEESLGLLAHGG--RLVYIGA 219 (302)
T ss_dssp ---------TTHHHHHTTEEEEE--EEEEC--
T ss_pred ---------HHHHHHHHhhccCC--EEEEEeC
Confidence 11233445555444 7887654
|
| >4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans} | Back alignment and structure |
|---|
Probab=97.11 E-value=0.00075 Score=59.06 Aligned_cols=66 Identities=20% Similarity=0.221 Sum_probs=45.6
Q ss_pred CCCeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCChhhHHhhccCceeeEEE
Q 017914 58 SPNRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETALMILTTLKNYTHLL 128 (364)
Q Consensus 58 ~~~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~~~~~~~d~v~~~~ 128 (364)
|.+||-++|.|.+|..+++.|++.||+|++.+|++++.+.+.+.++... .++. ++.+..|+|+-+.
T Consensus 4 Ms~kIgfIGLG~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~G~~~~----~s~~-e~~~~~dvvi~~l 69 (297)
T 4gbj_A 4 MSEKIAFLGLGNLGTPIAEILLEAGYELVVWNRTASKAEPLTKLGATVV----ENAI-DAITPGGIVFSVL 69 (297)
T ss_dssp CCCEEEEECCSTTHHHHHHHHHHTTCEEEEC-------CTTTTTTCEEC----SSGG-GGCCTTCEEEECC
T ss_pred CCCcEEEEecHHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHcCCeEe----CCHH-HHHhcCCceeeec
Confidence 4468999999999999999999999999999999988887766665432 1121 4567788877665
|
| >4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens} | Back alignment and structure |
|---|
Probab=97.11 E-value=0.00063 Score=61.13 Aligned_cols=67 Identities=16% Similarity=0.208 Sum_probs=49.9
Q ss_pred CCCCeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCChhhHHhhccC---ceeeEEE
Q 017914 57 QSPNRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETALMILTTL---KNYTHLL 128 (364)
Q Consensus 57 ~~~~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~~~~~~~---d~v~~~~ 128 (364)
+.+|+|.|+|.|.+|..+++.|.+.|++|++.+|++++.+.+...++.. ..+.+ +.+..+ |+|+.++
T Consensus 20 m~~mkIgiIGlG~mG~~~A~~L~~~G~~V~v~dr~~~~~~~l~~~g~~~----~~s~~-e~~~~a~~~DvVi~~v 89 (358)
T 4e21_A 20 FQSMQIGMIGLGRMGADMVRRLRKGGHECVVYDLNVNAVQALEREGIAG----ARSIE-EFCAKLVKPRVVWLMV 89 (358)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTTCBC----CSSHH-HHHHHSCSSCEEEECS
T ss_pred hcCCEEEEECchHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHCCCEE----eCCHH-HHHhcCCCCCEEEEeC
Confidence 4458999999999999999999999999999999988877776555431 12222 344444 8887765
|
| >3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A* | Back alignment and structure |
|---|
Probab=97.11 E-value=0.0013 Score=60.26 Aligned_cols=43 Identities=23% Similarity=0.159 Sum_probs=37.0
Q ss_pred CCCCeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhh
Q 017914 57 QSPNRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQ 100 (364)
Q Consensus 57 ~~~~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~ 100 (364)
..+|+|.|+|+|++|..++..|.+ |++|++++|++++.+.+.+
T Consensus 34 ~~~mkIaVIGlG~mG~~lA~~La~-G~~V~~~D~~~~~v~~l~~ 76 (432)
T 3pid_A 34 SEFMKITISGTGYVGLSNGVLIAQ-NHEVVALDIVQAKVDMLNQ 76 (432)
T ss_dssp -CCCEEEEECCSHHHHHHHHHHHT-TSEEEEECSCHHHHHHHHT
T ss_pred cCCCEEEEECcCHHHHHHHHHHHc-CCeEEEEecCHHHhhHHhc
Confidence 445899999999999999999887 9999999999887776653
|
| >3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans} | Back alignment and structure |
|---|
Probab=97.10 E-value=0.0015 Score=57.12 Aligned_cols=69 Identities=17% Similarity=0.184 Sum_probs=52.4
Q ss_pred CCCCeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCChhhHHhhccCceeeEEE
Q 017914 57 QSPNRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETALMILTTLKNYTHLL 128 (364)
Q Consensus 57 ~~~~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~~~~~~~d~v~~~~ 128 (364)
..+++|+|+|.|.+|+.+++.|...|.+|++.+|+..+...+.+.++..+. ..+.+ +.+..+|.|+...
T Consensus 153 l~g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~--~~~l~-~~l~~aDvVi~~~ 221 (293)
T 3d4o_A 153 IHGANVAVLGLGRVGMSVARKFAALGAKVKVGARESDLLARIAEMGMEPFH--ISKAA-QELRDVDVCINTI 221 (293)
T ss_dssp STTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTSEEEE--GGGHH-HHTTTCSEEEECC
T ss_pred CCCCEEEEEeeCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHCCCeecC--hhhHH-HHhcCCCEEEECC
Confidence 467899999999999999999999999999999988765544445555432 22221 5678899888765
|
| >4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=97.09 E-value=0.00076 Score=60.69 Aligned_cols=94 Identities=15% Similarity=0.100 Sum_probs=63.7
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCChhhH-Hhh-----ccCceeeEEEE
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETAL-MIL-----TTLKNYTHLLV 129 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~-~~~-----~~~d~v~~~~~ 129 (364)
..+.+|||+| +|.||..+++.+...|.+|++++|++++.+.+.+.+...+ .|..+.++ ..+ .++|.|+++++
T Consensus 166 ~~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~lGa~~~-~~~~~~~~~~~~~~~~~~g~Dvvid~~g 244 (353)
T 4dup_A 166 TEGESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKCEACERLGAKRG-INYRSEDFAAVIKAETGQGVDIILDMIG 244 (353)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHTCSEE-EETTTSCHHHHHHHHHSSCEEEEEESCC
T ss_pred CCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCCEE-EeCCchHHHHHHHHHhCCCceEEEECCC
Confidence 3467999997 9999999999999999999999999888776665555432 35554433 111 35788887764
Q ss_pred ecCCCCCCCChhhhHHHHHHHHhhcCCccEEEEEcc
Q 017914 130 SIPPLEGTGDPMLKHGELLRSTLMNGHLQWLGYLSS 165 (364)
Q Consensus 130 ~~~~~~~~~~~~~~~~~~l~~a~~~~~~~r~v~~Ss 165 (364)
. . .....+..++..| +++.++.
T Consensus 245 ~---------~---~~~~~~~~l~~~G--~iv~~g~ 266 (353)
T 4dup_A 245 A---------A---YFERNIASLAKDG--CLSIIAF 266 (353)
T ss_dssp G---------G---GHHHHHHTEEEEE--EEEECCC
T ss_pred H---------H---HHHHHHHHhccCC--EEEEEEe
Confidence 2 1 2233444555443 7877654
|
| >2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A | Back alignment and structure |
|---|
Probab=97.05 E-value=0.0017 Score=57.76 Aligned_cols=67 Identities=13% Similarity=0.090 Sum_probs=49.6
Q ss_pred CCCCeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCChhhHHhhccCceeeEEEE
Q 017914 57 QSPNRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETALMILTTLKNYTHLLV 129 (364)
Q Consensus 57 ~~~~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~~~~~~~d~v~~~~~ 129 (364)
..+|+|.|+|.|.||+.+++.|...|++|++.+|+.++.......++... | .+ +.+..+|.|+.++.
T Consensus 153 l~g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~--~---l~-e~l~~aDvVi~~vp 219 (330)
T 2gcg_A 153 LTQSTVGIIGLGRIGQAIARRLKPFGVQRFLYTGRQPRPEEAAEFQAEFV--S---TP-ELAAQSDFIVVACS 219 (330)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHGGGTCCEEEEESSSCCHHHHHTTTCEEC--C---HH-HHHHHCSEEEECCC
T ss_pred CCCCEEEEECcCHHHHHHHHHHHHCCCEEEEECCCCcchhHHHhcCceeC--C---HH-HHHhhCCEEEEeCC
Confidence 45789999999999999999999999999999997654443333344321 2 22 46678898877663
|
| >1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A* | Back alignment and structure |
|---|
Probab=97.05 E-value=0.0017 Score=58.60 Aligned_cols=94 Identities=19% Similarity=0.126 Sum_probs=63.5
Q ss_pred CCCeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCchhhhhhh-hCCceEEEccCChhhH--HhhccCceeeEEEEecCCC
Q 017914 58 SPNRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELE-QSGFDVHLFNANETAL--MILTTLKNYTHLLVSIPPL 134 (364)
Q Consensus 58 ~~~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~-~~~~~~~~~D~~~~~~--~~~~~~d~v~~~~~~~~~~ 134 (364)
.+.+|||+|+|.||..+++.+...|.+|+++++++++.+.+. +.+...+ .|..+.+. ....++|.|+.+++...
T Consensus 187 ~g~~VlV~GaG~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~lGa~~v-~~~~~~~~~~~~~~~~D~vid~~g~~~-- 263 (366)
T 1yqd_A 187 PGKHIGIVGLGGLGHVAVKFAKAFGSKVTVISTSPSKKEEALKNFGADSF-LVSRDQEQMQAAAGTLDGIIDTVSAVH-- 263 (366)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGGGHHHHHHTSCCSEE-EETTCHHHHHHTTTCEEEEEECCSSCC--
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcCCceE-EeccCHHHHHHhhCCCCEEEECCCcHH--
Confidence 567999999999999999999999999999999887766544 4555432 35555432 33356788887764210
Q ss_pred CCCCChhhhHHHHHHHHhhcCCccEEEEEcc
Q 017914 135 EGTGDPMLKHGELLRSTLMNGHLQWLGYLSS 165 (364)
Q Consensus 135 ~~~~~~~~~~~~~l~~a~~~~~~~r~v~~Ss 165 (364)
.....+..++..| ++|.+++
T Consensus 264 ---------~~~~~~~~l~~~G--~iv~~g~ 283 (366)
T 1yqd_A 264 ---------PLLPLFGLLKSHG--KLILVGA 283 (366)
T ss_dssp ---------CSHHHHHHEEEEE--EEEECCC
T ss_pred ---------HHHHHHHHHhcCC--EEEEEcc
Confidence 1123345555444 7887765
|
| >3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP} | Back alignment and structure |
|---|
Probab=97.04 E-value=0.00072 Score=57.45 Aligned_cols=39 Identities=23% Similarity=0.347 Sum_probs=34.2
Q ss_pred CCCCCeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCchh
Q 017914 56 WQSPNRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMK 94 (364)
Q Consensus 56 ~~~~~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~~ 94 (364)
...+|+|.|+|+|.+|..+++.|.+.|++|++.+|++++
T Consensus 16 ~~~~~kIgiIG~G~mG~alA~~L~~~G~~V~~~~r~~~~ 54 (245)
T 3dtt_A 16 YFQGMKIAVLGTGTVGRTMAGALADLGHEVTIGTRDPKA 54 (245)
T ss_dssp ---CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHH
T ss_pred ccCCCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCChhh
Confidence 345689999999999999999999999999999998876
|
| >3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1} | Back alignment and structure |
|---|
Probab=97.03 E-value=0.0037 Score=58.22 Aligned_cols=43 Identities=28% Similarity=0.322 Sum_probs=38.2
Q ss_pred CCCCeEEEEcCChhhHHHHHHHHhC-CC-EEEEEEeCch----hhhhhh
Q 017914 57 QSPNRMLILGMGFVGRIFAEKIKNQ-GW-VVSGTCTNVM----KKKELE 99 (364)
Q Consensus 57 ~~~~~vlVtGtG~iG~~l~~~L~~~-g~-~V~~~~r~~~----~~~~l~ 99 (364)
...|+|.|+|+|++|..++..|.+. || +|++++|+++ +.+.+.
T Consensus 16 ~~~mkIaVIGlG~mG~~lA~~la~~~G~~~V~~~D~~~~~~~~kv~~l~ 64 (478)
T 3g79_A 16 GPIKKIGVLGMGYVGIPAAVLFADAPCFEKVLGFQRNSKSSGYKIEMLN 64 (478)
T ss_dssp CSCCEEEEECCSTTHHHHHHHHHHSTTCCEEEEECCCCTTTTTHHHHHT
T ss_pred CCCCEEEEECcCHHHHHHHHHHHHhCCCCeEEEEECChhHhHHHHHHHH
Confidence 4458999999999999999999999 99 9999999988 666554
|
| >2nqt_A N-acetyl-gamma-glutamyl-phosphate reductase; apoprotein, dimer, rossmann fold, structural genomics, PSI, protein structure initiative; 1.58A {Mycobacterium tuberculosis} PDB: 2i3a_A* 2i3g_A | Back alignment and structure |
|---|
Probab=97.03 E-value=0.00047 Score=61.66 Aligned_cols=90 Identities=12% Similarity=0.062 Sum_probs=54.8
Q ss_pred CCeEEEEc-CChhhHHHHHHHHhCC-----C-EEEEEEeCch--h-hhh----hhh-CCceEEEccCChhhHHhhccCce
Q 017914 59 PNRMLILG-MGFVGRIFAEKIKNQG-----W-VVSGTCTNVM--K-KKE----LEQ-SGFDVHLFNANETALMILTTLKN 123 (364)
Q Consensus 59 ~~~vlVtG-tG~iG~~l~~~L~~~g-----~-~V~~~~r~~~--~-~~~----l~~-~~~~~~~~D~~~~~~~~~~~~d~ 123 (364)
|++|.|+| ||++|+.|++.|.+++ + +++.+.+... + ... +.. ..+.+ .|+. ...+.++|+
T Consensus 9 m~kVaIvGATG~vG~~llr~L~~~~~~~~~~~ei~~l~s~~~agk~~~~~~~~l~~~~~~~~--~~~~---~~~~~~~Dv 83 (352)
T 2nqt_A 9 ATKVAVAGASGYAGGEILRLLLGHPAYADGRLRIGALTAATSAGSTLGEHHPHLTPLAHRVV--EPTE---AAVLGGHDA 83 (352)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHTCHHHHTTSEEEEEEEESSCTTSBGGGTCTTCGGGTTCBC--EECC---HHHHTTCSE
T ss_pred CCEEEEECCCCHHHHHHHHHHHcCCCCCCccEEEEEEECCCcCCCchhhhcccccccceeee--ccCC---HHHhcCCCE
Confidence 57999999 9999999999999987 3 7888765322 1 111 110 11122 1221 233558898
Q ss_pred eeEEEEecCCCCCCCChhhhHHHHHHHHhhcCCccEEEEEccce
Q 017914 124 YTHLLVSIPPLEGTGDPMLKHGELLRSTLMNGHLQWLGYLSSTG 167 (364)
Q Consensus 124 v~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~r~v~~Ss~~ 167 (364)
|+.+.+.. ....+...+ +.|+ ++|-+|+..
T Consensus 84 Vf~alg~~------------~s~~~~~~~-~~G~-~vIDlSa~~ 113 (352)
T 2nqt_A 84 VFLALPHG------------HSAVLAQQL-SPET-LIIDCGADF 113 (352)
T ss_dssp EEECCTTS------------CCHHHHHHS-CTTS-EEEECSSTT
T ss_pred EEECCCCc------------chHHHHHHH-hCCC-EEEEECCCc
Confidence 88765321 133455556 6675 688888754
|
| >2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.02 E-value=0.0013 Score=58.12 Aligned_cols=65 Identities=17% Similarity=0.189 Sum_probs=49.8
Q ss_pred CCeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCChhhHHhhccCceeeEEE
Q 017914 59 PNRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETALMILTTLKNYTHLL 128 (364)
Q Consensus 59 ~~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~~~~~~~d~v~~~~ 128 (364)
.|+|.|+|.|.+|+.++..|.+.|++|++.+|++++.+.+.+.++... .+.. +.+.++|.|+.+.
T Consensus 30 ~~~I~iIG~G~mG~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~----~~~~-~~~~~~DvVi~av 94 (316)
T 2uyy_A 30 DKKIGFLGLGLMGSGIVSNLLKMGHTVTVWNRTAEKCDLFIQEGARLG----RTPA-EVVSTCDITFACV 94 (316)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHTTCCEEEECSSGGGGHHHHHTTCEEC----SCHH-HHHHHCSEEEECC
T ss_pred CCeEEEEcccHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHcCCEEc----CCHH-HHHhcCCEEEEeC
Confidence 478999999999999999999999999999999887766655554321 1222 4556788887765
|
| >3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A* | Back alignment and structure |
|---|
Probab=97.02 E-value=0.0013 Score=58.63 Aligned_cols=94 Identities=15% Similarity=0.121 Sum_probs=64.4
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCChhhH-H---hh---ccCceeeEEE
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETAL-M---IL---TTLKNYTHLL 128 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~-~---~~---~~~d~v~~~~ 128 (364)
..+.+|||+| +|.+|...++.+...|.+|+++++++++.+.+.+.+...+ .|..+.++ . .. .++|.|++++
T Consensus 147 ~~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga~~~-~~~~~~~~~~~~~~~~~~~g~D~vid~~ 225 (334)
T 3qwb_A 147 KKGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKLKIAKEYGAEYL-INASKEDILRQVLKFTNGKGVDASFDSV 225 (334)
T ss_dssp CTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSEE-EETTTSCHHHHHHHHTTTSCEEEEEECC
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCcEE-EeCCCchHHHHHHHHhCCCCceEEEECC
Confidence 4567999999 9999999999999999999999998887776666665432 34444332 1 11 3578888776
Q ss_pred EecCCCCCCCChhhhHHHHHHHHhhcCCccEEEEEcc
Q 017914 129 VSIPPLEGTGDPMLKHGELLRSTLMNGHLQWLGYLSS 165 (364)
Q Consensus 129 ~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~r~v~~Ss 165 (364)
+. ......+..++..| ++|.++.
T Consensus 226 g~------------~~~~~~~~~l~~~G--~iv~~G~ 248 (334)
T 3qwb_A 226 GK------------DTFEISLAALKRKG--VFVSFGN 248 (334)
T ss_dssp GG------------GGHHHHHHHEEEEE--EEEECCC
T ss_pred Ch------------HHHHHHHHHhccCC--EEEEEcC
Confidence 42 12334455555544 7887754
|
| >2hjs_A USG-1 protein homolog; aspartate-semialdehyde dehydrogenase, probable hydrolase, PS aeruginosa, structurual genomics; 2.20A {Pseudomonas aeruginosa} SCOP: c.2.1.3 d.81.1.1 | Back alignment and structure |
|---|
Probab=97.01 E-value=0.0014 Score=58.38 Aligned_cols=94 Identities=7% Similarity=0.039 Sum_probs=52.5
Q ss_pred CCCeEEEEc-CChhhHHHHHHHHhCCC---EEEEEEeCchhhhhhhhCCceEEEccCChhhHHhhccCceeeEEEEecCC
Q 017914 58 SPNRMLILG-MGFVGRIFAEKIKNQGW---VVSGTCTNVMKKKELEQSGFDVHLFNANETALMILTTLKNYTHLLVSIPP 133 (364)
Q Consensus 58 ~~~~vlVtG-tG~iG~~l~~~L~~~g~---~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~~~~~~~d~v~~~~~~~~~ 133 (364)
++|+|+|+| +|.+|+.+++.|.+++| +++++.........+.-.+......|. +...+.++|.|+.+.+.
T Consensus 5 m~~kV~IiGAtG~iG~~llr~L~~~~~~~~elv~i~s~~~~g~~~~~~g~~i~~~~~---~~~~~~~~DvV~~a~g~--- 78 (340)
T 2hjs_A 5 QPLNVAVVGATGSVGEALVGLLDERDFPLHRLHLLASAESAGQRMGFAESSLRVGDV---DSFDFSSVGLAFFAAAA--- 78 (340)
T ss_dssp CCCCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEECTTTTTCEEEETTEEEECEEG---GGCCGGGCSEEEECSCH---
T ss_pred CCcEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEEecCCCCCCccccCCcceEEecC---CHHHhcCCCEEEEcCCc---
Confidence 347999999 99999999999997764 555554221110111001212111122 11235678888876531
Q ss_pred CCCCCChhhhHHHHHHHHhhcCCccEEEEEccce
Q 017914 134 LEGTGDPMLKHGELLRSTLMNGHLQWLGYLSSTG 167 (364)
Q Consensus 134 ~~~~~~~~~~~~~~l~~a~~~~~~~r~v~~Ss~~ 167 (364)
.....+...+.+.|++ +|-+|+..
T Consensus 79 ---------~~s~~~a~~~~~aG~k-vId~Sa~~ 102 (340)
T 2hjs_A 79 ---------EVSRAHAERARAAGCS-VIDLSGAL 102 (340)
T ss_dssp ---------HHHHHHHHHHHHTTCE-EEETTCTT
T ss_pred ---------HHHHHHHHHHHHCCCE-EEEeCCCC
Confidence 1233445555666776 67777653
|
| >2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A | Back alignment and structure |
|---|
Probab=97.01 E-value=0.0007 Score=57.99 Aligned_cols=65 Identities=11% Similarity=0.155 Sum_probs=48.8
Q ss_pred CCeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhC-CceEEEccCChhhHHhhccCceeeEEE
Q 017914 59 PNRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQS-GFDVHLFNANETALMILTTLKNYTHLL 128 (364)
Q Consensus 59 ~~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~-~~~~~~~D~~~~~~~~~~~~d~v~~~~ 128 (364)
+|+|.|+|+|.+|+.+++.|.+.|++|.+.+|++++...+.+. ++.. ..+.+ +.+.++|.|+.+.
T Consensus 3 ~m~i~iiG~G~mG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~g~~~----~~~~~-~~~~~~D~Vi~~v 68 (259)
T 2ahr_A 3 AMKIGIIGVGKMASAIIKGLKQTPHELIISGSSLERSKEIAEQLALPY----AMSHQ-DLIDQVDLVILGI 68 (259)
T ss_dssp CCEEEEECCSHHHHHHHHHHTTSSCEEEEECSSHHHHHHHHHHHTCCB----CSSHH-HHHHTCSEEEECS
T ss_pred ccEEEEECCCHHHHHHHHHHHhCCCeEEEECCCHHHHHHHHHHcCCEe----eCCHH-HHHhcCCEEEEEe
Confidence 4799999999999999999999999999999998776655432 4331 12222 4556788888765
|
| >2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=97.01 E-value=0.0018 Score=56.82 Aligned_cols=71 Identities=13% Similarity=0.133 Sum_probs=53.2
Q ss_pred CCCCCeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCChhhHHhhccCceeeEEEE
Q 017914 56 WQSPNRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETALMILTTLKNYTHLLV 129 (364)
Q Consensus 56 ~~~~~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~~~~~~~d~v~~~~~ 129 (364)
...+++|+|+|.|.+|+.+++.|...|++|++.+|+.++...+.+.++..+. ..+.+ +.+..+|.|+....
T Consensus 154 ~l~g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~--~~~l~-~~l~~aDvVi~~~p 224 (300)
T 2rir_A 154 TIHGSQVAVLGLGRTGMTIARTFAALGANVKVGARSSAHLARITEMGLVPFH--TDELK-EHVKDIDICINTIP 224 (300)
T ss_dssp CSTTSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCEEEE--GGGHH-HHSTTCSEEEECCS
T ss_pred CCCCCEEEEEcccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCCeEEc--hhhHH-HHhhCCCEEEECCC
Confidence 3457899999999999999999999999999999988765544444554432 12222 56678898888764
|
| >2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A* | Back alignment and structure |
|---|
Probab=97.00 E-value=0.0016 Score=60.95 Aligned_cols=44 Identities=20% Similarity=0.208 Sum_probs=39.2
Q ss_pred CCCeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhC
Q 017914 58 SPNRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQS 101 (364)
Q Consensus 58 ~~~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~ 101 (364)
..|+|.|+|+|++|..++..|.+.|++|++++|++++.+.+.+.
T Consensus 7 ~~~~I~VIG~G~vG~~lA~~la~~G~~V~~~d~~~~~v~~l~~~ 50 (478)
T 2y0c_A 7 GSMNLTIIGSGSVGLVTGACLADIGHDVFCLDVDQAKIDILNNG 50 (478)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHTT
T ss_pred CCceEEEECcCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHCC
Confidence 35899999999999999999999999999999998887776543
|
| >2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A* | Back alignment and structure |
|---|
Probab=96.99 E-value=0.001 Score=58.14 Aligned_cols=64 Identities=17% Similarity=0.206 Sum_probs=49.1
Q ss_pred CeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCChhhHHhhccCceeeEEE
Q 017914 60 NRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETALMILTTLKNYTHLL 128 (364)
Q Consensus 60 ~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~~~~~~~d~v~~~~ 128 (364)
|+|.|+|.|.+|..++..|.+.|++|++.+|++++.+.+.+.++... .+.+ +.+..+|.|+.+.
T Consensus 1 m~i~iiG~G~mG~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~----~~~~-~~~~~~Dvvi~~v 64 (296)
T 2gf2_A 1 MPVGFIGLGNMGNPMAKNLMKHGYPLIIYDVFPDACKEFQDAGEQVV----SSPA-DVAEKADRIITML 64 (296)
T ss_dssp CCEEEECCSTTHHHHHHHHHHTTCCEEEECSSTHHHHHHHTTTCEEC----SSHH-HHHHHCSEEEECC
T ss_pred CeEEEEeccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeec----CCHH-HHHhcCCEEEEeC
Confidence 57999999999999999999999999999999887776665554421 1222 4556788877765
|
| >3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A* | Back alignment and structure |
|---|
Probab=96.99 E-value=0.00076 Score=59.89 Aligned_cols=94 Identities=11% Similarity=-0.017 Sum_probs=63.2
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCChhhH-Hh----h--ccCceeeEEE
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETAL-MI----L--TTLKNYTHLL 128 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~-~~----~--~~~d~v~~~~ 128 (364)
..+.+|||+| +|.+|...++.+...|.+|+++++++++.+.+.+.+...+ .|..+.++ .. . .++|.|++++
T Consensus 139 ~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~Ga~~~-~~~~~~~~~~~~~~~~~~~g~Dvvid~~ 217 (325)
T 3jyn_A 139 KPGEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKAAHAKALGAWET-IDYSHEDVAKRVLELTDGKKCPVVYDGV 217 (325)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHTCSEE-EETTTSCHHHHHHHHTTTCCEEEEEESS
T ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCCEE-EeCCCccHHHHHHHHhCCCCceEEEECC
Confidence 4567999999 8999999999999999999999999887776665554432 35544333 11 1 3578777766
Q ss_pred EecCCCCCCCChhhhHHHHHHHHhhcCCccEEEEEcc
Q 017914 129 VSIPPLEGTGDPMLKHGELLRSTLMNGHLQWLGYLSS 165 (364)
Q Consensus 129 ~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~r~v~~Ss 165 (364)
+. ......+..++..| ++|.++.
T Consensus 218 g~------------~~~~~~~~~l~~~G--~iv~~g~ 240 (325)
T 3jyn_A 218 GQ------------DTWLTSLDSVAPRG--LVVSFGN 240 (325)
T ss_dssp CG------------GGHHHHHTTEEEEE--EEEECCC
T ss_pred Ch------------HHHHHHHHHhcCCC--EEEEEec
Confidence 42 12233444555443 7887764
|
| >1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5 | Back alignment and structure |
|---|
Probab=96.98 E-value=0.0012 Score=56.88 Aligned_cols=71 Identities=18% Similarity=0.180 Sum_probs=49.7
Q ss_pred CCCCeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhC-Cc--eEEEccCChhhHHhhccCceeeEEEEe
Q 017914 57 QSPNRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQS-GF--DVHLFNANETALMILTTLKNYTHLLVS 130 (364)
Q Consensus 57 ~~~~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~-~~--~~~~~D~~~~~~~~~~~~d~v~~~~~~ 130 (364)
..+++|+|+|+|.+|+.++..|.+.|++|++.+|+.++...+.+. +. .....|+.+ ... ..+|.|+++++.
T Consensus 117 l~~k~vlViGaGg~g~a~a~~L~~~G~~V~v~~R~~~~~~~la~~~~~~~~~~~~~~~~--~~~-~~~DivVn~t~~ 190 (271)
T 1nyt_A 117 RPGLRILLIGAGGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTGSIQALSMDE--LEG-HEFDLIINATSS 190 (271)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGGSSEEECCSGG--GTT-CCCSEEEECCSC
T ss_pred cCCCEEEEECCcHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHhhccCCeeEecHHH--hcc-CCCCEEEECCCC
Confidence 456899999988899999999999999999999998776554321 11 122233321 111 578888888754
|
| >3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579} | Back alignment and structure |
|---|
Probab=96.98 E-value=0.00084 Score=57.09 Aligned_cols=65 Identities=11% Similarity=0.150 Sum_probs=49.4
Q ss_pred CCeEEEEcCChhhHHHHHHHHhCCC----EEEEEEeCchhhhhhhh-CCceEEEccCChhhHHhhccCceeeEEE
Q 017914 59 PNRMLILGMGFVGRIFAEKIKNQGW----VVSGTCTNVMKKKELEQ-SGFDVHLFNANETALMILTTLKNYTHLL 128 (364)
Q Consensus 59 ~~~vlVtGtG~iG~~l~~~L~~~g~----~V~~~~r~~~~~~~l~~-~~~~~~~~D~~~~~~~~~~~~d~v~~~~ 128 (364)
+|+|.|+|.|.+|..+++.|.+.|+ +|++.+|++++.+.+.+ .++.. ..+.. +.+.++|.|+.+.
T Consensus 2 ~~~i~iIG~G~mG~~~a~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~g~~~----~~~~~-e~~~~aDvVilav 71 (247)
T 3gt0_A 2 DKQIGFIGCGNMGMAMIGGMINKNIVSSNQIICSDLNTANLKNASEKYGLTT----TTDNN-EVAKNADILILSI 71 (247)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTSSCGGGEEEECSCHHHHHHHHHHHCCEE----CSCHH-HHHHHCSEEEECS
T ss_pred CCeEEEECccHHHHHHHHHHHhCCCCCCCeEEEEeCCHHHHHHHHHHhCCEE----eCChH-HHHHhCCEEEEEe
Confidence 5799999999999999999999998 99999999887766643 24432 11222 4566788887765
|
| >1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6 | Back alignment and structure |
|---|
Probab=96.97 E-value=0.0021 Score=55.08 Aligned_cols=62 Identities=13% Similarity=0.171 Sum_probs=45.6
Q ss_pred CeEEEEcCChhhHHHHHHHHhCCCEEEEEEe--CchhhhhhhhCCceEEEccCChhhHHhhccCceeeEEE
Q 017914 60 NRMLILGMGFVGRIFAEKIKNQGWVVSGTCT--NVMKKKELEQSGFDVHLFNANETALMILTTLKNYTHLL 128 (364)
Q Consensus 60 ~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r--~~~~~~~l~~~~~~~~~~D~~~~~~~~~~~~d~v~~~~ 128 (364)
|+|.|+|.|.+|..++..|.+.|++|++.+| +++..+.+.+.++. .+.+ +.+..+|.|+.+.
T Consensus 1 M~I~iIG~G~mG~~la~~l~~~g~~V~~~~~~~~~~~~~~~~~~g~~------~~~~-~~~~~aDvvi~~v 64 (264)
T 1i36_A 1 LRVGFIGFGEVAQTLASRLRSRGVEVVTSLEGRSPSTIERARTVGVT------ETSE-EDVYSCPVVISAV 64 (264)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCEEEECCTTCCHHHHHHHHHHTCE------ECCH-HHHHTSSEEEECS
T ss_pred CeEEEEechHHHHHHHHHHHHCCCeEEEeCCccCHHHHHHHHHCCCc------CCHH-HHHhcCCEEEEEC
Confidence 5899999999999999999999999999877 44444444434443 2222 4567889888765
|
| >2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A* | Back alignment and structure |
|---|
Probab=96.97 E-value=0.0011 Score=59.48 Aligned_cols=94 Identities=17% Similarity=0.109 Sum_probs=63.4
Q ss_pred CCCeEEEEcCChhhHHHHHHHHhCCC-EEEEEEeCchhhhhhhhCCceEEEccCChhhH-Hhh------ccCceeeEEEE
Q 017914 58 SPNRMLILGMGFVGRIFAEKIKNQGW-VVSGTCTNVMKKKELEQSGFDVHLFNANETAL-MIL------TTLKNYTHLLV 129 (364)
Q Consensus 58 ~~~~vlVtGtG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~-~~~------~~~d~v~~~~~ 129 (364)
.+.+|||+|+|.+|..+++.+...|+ +|+++++++++.+.+.+.++..+ .|..+.++ +.+ .++|.|+.+++
T Consensus 167 ~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~~Ga~~~-~~~~~~~~~~~v~~~~~g~g~D~vid~~g 245 (348)
T 2d8a_A 167 SGKSVLITGAGPLGLLGIAVAKASGAYPVIVSEPSDFRRELAKKVGADYV-INPFEEDVVKEVMDITDGNGVDVFLEFSG 245 (348)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHHHHTCSEE-ECTTTSCHHHHHHHHTTTSCEEEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEE-ECCCCcCHHHHHHHHcCCCCCCEEEECCC
Confidence 56799999989999999999999999 99999999877766655555432 35544332 111 25788877664
Q ss_pred ecCCCCCCCChhhhHHHHHHHHhhcCCccEEEEEcc
Q 017914 130 SIPPLEGTGDPMLKHGELLRSTLMNGHLQWLGYLSS 165 (364)
Q Consensus 130 ~~~~~~~~~~~~~~~~~~l~~a~~~~~~~r~v~~Ss 165 (364)
. .......+..++..| ++|.+++
T Consensus 246 ~-----------~~~~~~~~~~l~~~G--~iv~~g~ 268 (348)
T 2d8a_A 246 A-----------PKALEQGLQAVTPAG--RVSLLGL 268 (348)
T ss_dssp C-----------HHHHHHHHHHEEEEE--EEEECCC
T ss_pred C-----------HHHHHHHHHHHhcCC--EEEEEcc
Confidence 2 112334455555544 7887765
|
| >2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A | Back alignment and structure |
|---|
Probab=96.96 E-value=0.0014 Score=61.23 Aligned_cols=41 Identities=17% Similarity=0.198 Sum_probs=36.9
Q ss_pred CCeEEEEcCChhhHHHHHHHHhC--CCEEEEEEeCchhhhhhh
Q 017914 59 PNRMLILGMGFVGRIFAEKIKNQ--GWVVSGTCTNVMKKKELE 99 (364)
Q Consensus 59 ~~~vlVtGtG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~l~ 99 (364)
+|+|.|+|+|.+|..++..|.+. |++|++++|++++.+.+.
T Consensus 5 ~mkI~VIG~G~mG~~lA~~La~~g~G~~V~~~d~~~~~~~~l~ 47 (467)
T 2q3e_A 5 IKKICCIGAGYVGGPTCSVIAHMCPEIRVTVVDVNESRINAWN 47 (467)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCHHHHHHHT
T ss_pred ccEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCHHHHHHHh
Confidence 47999999999999999999998 899999999988776654
|
| >2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A* | Back alignment and structure |
|---|
Probab=96.94 E-value=0.0007 Score=58.96 Aligned_cols=63 Identities=10% Similarity=0.009 Sum_probs=47.6
Q ss_pred CCeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCChhhHHhhccCceeeEEE
Q 017914 59 PNRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETALMILTTLKNYTHLL 128 (364)
Q Consensus 59 ~~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~~~~~~~d~v~~~~ 128 (364)
||+|.|+|.|.+|..++..|.+ |++|++.+|++++...+.+.++... + .+ +.+.++|.|+.+.
T Consensus 1 M~~i~iiG~G~~G~~~a~~l~~-g~~V~~~~~~~~~~~~~~~~g~~~~--~---~~-~~~~~~D~vi~~v 63 (289)
T 2cvz_A 1 MEKVAFIGLGAMGYPMAGHLAR-RFPTLVWNRTFEKALRHQEEFGSEA--V---PL-ERVAEARVIFTCL 63 (289)
T ss_dssp -CCEEEECCSTTHHHHHHHHHT-TSCEEEECSSTHHHHHHHHHHCCEE--C---CG-GGGGGCSEEEECC
T ss_pred CCeEEEEcccHHHHHHHHHHhC-CCeEEEEeCCHHHHHHHHHCCCccc--C---HH-HHHhCCCEEEEeC
Confidence 3689999999999999999999 9999999998877666554444332 2 11 3456788888765
|
| >3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A* | Back alignment and structure |
|---|
Probab=96.93 E-value=0.0029 Score=55.46 Aligned_cols=72 Identities=13% Similarity=0.091 Sum_probs=51.3
Q ss_pred CCCCeEEEEcCChhhHHHHHHHHhCCC-EEEEEEeC---chhhhhhhh-----CCceEEEccCChhhH--HhhccCceee
Q 017914 57 QSPNRMLILGMGFVGRIFAEKIKNQGW-VVSGTCTN---VMKKKELEQ-----SGFDVHLFNANETAL--MILTTLKNYT 125 (364)
Q Consensus 57 ~~~~~vlVtGtG~iG~~l~~~L~~~g~-~V~~~~r~---~~~~~~l~~-----~~~~~~~~D~~~~~~--~~~~~~d~v~ 125 (364)
..++++||+|+|.+|+.++..|.+.|. +|++..|+ .++.+.+.+ .+..+...++.+.++ ..+.++|.|+
T Consensus 146 l~gk~~lVlGAGGaaraia~~L~~~G~~~v~v~nRt~~~~~~a~~la~~~~~~~~~~v~~~~~~~l~~~~~~l~~~DiII 225 (312)
T 3t4e_A 146 MRGKTMVLLGAGGAATAIGAQAAIEGIKEIKLFNRKDDFFEKAVAFAKRVNENTDCVVTVTDLADQHAFTEALASADILT 225 (312)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSSTHHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHHHCSEEE
T ss_pred cCCCEEEEECcCHHHHHHHHHHHHcCCCEEEEEECCCchHHHHHHHHHHhhhccCcceEEechHhhhhhHhhccCceEEE
Confidence 456899999999999999999999998 89999999 555554432 233344445554321 4566788887
Q ss_pred EEE
Q 017914 126 HLL 128 (364)
Q Consensus 126 ~~~ 128 (364)
++.
T Consensus 226 NaT 228 (312)
T 3t4e_A 226 NGT 228 (312)
T ss_dssp ECS
T ss_pred ECC
Confidence 754
|
| >2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6 | Back alignment and structure |
|---|
Probab=96.93 E-value=0.0016 Score=56.42 Aligned_cols=64 Identities=13% Similarity=0.197 Sum_probs=47.7
Q ss_pred CeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCce-EEEccCChhhHHhhccCceeeEEE
Q 017914 60 NRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFD-VHLFNANETALMILTTLKNYTHLL 128 (364)
Q Consensus 60 ~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~-~~~~D~~~~~~~~~~~~d~v~~~~ 128 (364)
|+|.|+|+|.+|..++..|.+.|++|++.+|+++..+.+.+.++. ....| .+ .. .++|.|+.++
T Consensus 1 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~---~~-~~-~~~D~vi~av 65 (279)
T 2f1k_A 1 MKIGVVGLGLIGASLAGDLRRRGHYLIGVSRQQSTCEKAVERQLVDEAGQD---LS-LL-QTAKIIFLCT 65 (279)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTSCSEEESC---GG-GG-TTCSEEEECS
T ss_pred CEEEEEcCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhCCCCccccCC---HH-Hh-CCCCEEEEEC
Confidence 589999999999999999999999999999998776665544442 11112 22 34 6788877765
|
| >2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6 | Back alignment and structure |
|---|
Probab=96.92 E-value=0.0019 Score=56.04 Aligned_cols=66 Identities=20% Similarity=0.234 Sum_probs=48.9
Q ss_pred CCeEEEEcCChhhHHHHHHHHhCCC--EEEEEEeCchhhhhhhhCCceE-EEccCChhhHHhhc-cCceeeEEE
Q 017914 59 PNRMLILGMGFVGRIFAEKIKNQGW--VVSGTCTNVMKKKELEQSGFDV-HLFNANETALMILT-TLKNYTHLL 128 (364)
Q Consensus 59 ~~~vlVtGtG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~l~~~~~~~-~~~D~~~~~~~~~~-~~d~v~~~~ 128 (364)
||+|.|+|.|.+|..++..|.+.|+ +|++.+|+++..+.+.+.++.. ...| .+ ..+. ++|.|+.++
T Consensus 1 m~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~~g~~~~~~~~---~~-~~~~~~aDvVilav 70 (281)
T 2g5c_A 1 MQNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTS---IA-KVEDFSPDFVMLSS 70 (281)
T ss_dssp CCEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEESC---GG-GGGGTCCSEEEECS
T ss_pred CcEEEEEecCHHHHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHCCCcccccCC---HH-HHhcCCCCEEEEcC
Confidence 4689999999999999999999998 9999999887766554444421 1112 21 4566 788888765
|
| >2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A* | Back alignment and structure |
|---|
Probab=96.91 E-value=0.0016 Score=59.07 Aligned_cols=73 Identities=16% Similarity=0.141 Sum_probs=52.7
Q ss_pred CCCCeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhh-CCceEEEccCCh-hhH-HhhccCceeeEEEEe
Q 017914 57 QSPNRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQ-SGFDVHLFNANE-TAL-MILTTLKNYTHLLVS 130 (364)
Q Consensus 57 ~~~~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~-~~~~~~~~D~~~-~~~-~~~~~~d~v~~~~~~ 130 (364)
..+++|+|+|+|.||+.+++.+...|.+|++.+|++++.+.+.+ .+..+. .+..+ .++ +.+.++|.|+.++..
T Consensus 166 l~g~~V~ViG~G~iG~~~a~~a~~~Ga~V~~~d~~~~~l~~~~~~~g~~~~-~~~~~~~~l~~~l~~aDvVi~~~~~ 241 (377)
T 2vhw_A 166 VEPADVVVIGAGTAGYNAARIANGMGATVTVLDINIDKLRQLDAEFCGRIH-TRYSSAYELEGAVKRADLVIGAVLV 241 (377)
T ss_dssp BCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTTSSE-EEECCHHHHHHHHHHCSEEEECCCC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhcCCeeE-eccCCHHHHHHHHcCCCEEEECCCc
Confidence 45689999999999999999999999999999999877655443 233221 12222 223 566789999987653
|
| >3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A* | Back alignment and structure |
|---|
Probab=96.91 E-value=0.0047 Score=54.59 Aligned_cols=68 Identities=19% Similarity=0.133 Sum_probs=50.4
Q ss_pred CCCeEEEEcCChhhHHHHHHHHhCCC--EEEEEEeCchhhhh----hhh------CCceEEEccCChhhHHhhccCceee
Q 017914 58 SPNRMLILGMGFVGRIFAEKIKNQGW--VVSGTCTNVMKKKE----LEQ------SGFDVHLFNANETALMILTTLKNYT 125 (364)
Q Consensus 58 ~~~~vlVtGtG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~----l~~------~~~~~~~~D~~~~~~~~~~~~d~v~ 125 (364)
..++|.|+|+|.+|..++..|+..|+ +|++++++.++.+. +.. .++.+...| ...++++|+|+
T Consensus 4 ~~~kI~ViGaG~vG~~~a~~l~~~~~~~~l~l~D~~~~k~~g~a~DL~~~~~~~~~~v~i~~~~-----~~a~~~aDvVv 78 (326)
T 3pqe_A 4 HVNKVALIGAGFVGSSYAFALINQGITDELVVIDVNKEKAMGDVMDLNHGKAFAPQPVKTSYGT-----YEDCKDADIVC 78 (326)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHTGGGSSSCCEEEEEC-----GGGGTTCSEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHHHHHhccccccCCeEEEeCc-----HHHhCCCCEEE
Confidence 35799999999999999999999886 99999998765443 322 133333222 24788999999
Q ss_pred EEEEe
Q 017914 126 HLLVS 130 (364)
Q Consensus 126 ~~~~~ 130 (364)
..++.
T Consensus 79 i~ag~ 83 (326)
T 3pqe_A 79 ICAGA 83 (326)
T ss_dssp ECCSC
T ss_pred Eeccc
Confidence 98764
|
| >3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A* | Back alignment and structure |
|---|
Probab=96.90 E-value=0.0021 Score=56.29 Aligned_cols=65 Identities=12% Similarity=0.187 Sum_probs=52.5
Q ss_pred CCeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCChhhHHhhccCceeeEEE
Q 017914 59 PNRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETALMILTTLKNYTHLL 128 (364)
Q Consensus 59 ~~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~~~~~~~d~v~~~~ 128 (364)
|++|-++|.|.+|..+++.|++.||+|++.+|++++.+.+...+.... .++. ++.+.+|+|+-+.
T Consensus 3 M~kIgfIGlG~MG~~mA~~L~~~G~~v~v~dr~~~~~~~l~~~Ga~~a----~s~~-e~~~~~dvv~~~l 67 (300)
T 3obb_A 3 MKQIAFIGLGHMGAPMATNLLKAGYLLNVFDLVQSAVDGLVAAGASAA----RSAR-DAVQGADVVISML 67 (300)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHHTTCEEC----SSHH-HHHTTCSEEEECC
T ss_pred cCEEEEeeehHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHHcCCEEc----CCHH-HHHhcCCceeecC
Confidence 579999999999999999999999999999999998888776665432 1122 5667788887766
|
| >3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus} | Back alignment and structure |
|---|
Probab=96.89 E-value=0.0012 Score=58.50 Aligned_cols=44 Identities=18% Similarity=0.407 Sum_probs=35.4
Q ss_pred CCCeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCc
Q 017914 58 SPNRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGF 103 (364)
Q Consensus 58 ~~~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~ 103 (364)
|+|+|+|+|+|.+|..++..|.+.|++|++++|++. +.+.+.++
T Consensus 1 M~mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~~--~~i~~~Gl 44 (320)
T 3i83_A 1 MSLNILVIGTGAIGSFYGALLAKTGHCVSVVSRSDY--ETVKAKGI 44 (320)
T ss_dssp --CEEEEESCCHHHHHHHHHHHHTTCEEEEECSTTH--HHHHHHCE
T ss_pred CCCEEEEECcCHHHHHHHHHHHhCCCeEEEEeCChH--HHHHhCCc
Confidence 348999999999999999999999999999999762 44443443
|
| >3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis} | Back alignment and structure |
|---|
Probab=96.89 E-value=0.0012 Score=59.12 Aligned_cols=72 Identities=15% Similarity=0.147 Sum_probs=52.5
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCChhhH-H---hh---ccCceeeEEE
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETAL-M---IL---TTLKNYTHLL 128 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~-~---~~---~~~d~v~~~~ 128 (364)
..+.+|||+| +|.+|...++.+...|.+|+++++++++.+.+.+.+...+ .|..+.++ . .+ .++|.|++++
T Consensus 143 ~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~lga~~~-~~~~~~~~~~~~~~~~~~~g~Dvvid~~ 221 (340)
T 3gms_A 143 QRNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKHTEELLRLGAAYV-IDTSTAPLYETVMELTNGIGADAAIDSI 221 (340)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHHHTCSEE-EETTTSCHHHHHHHHTTTSCEEEEEESS
T ss_pred CCCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhCCCcEE-EeCCcccHHHHHHHHhCCCCCcEEEECC
Confidence 4567999999 7799999999999999999999999888776665555433 35544332 1 11 2578888766
Q ss_pred E
Q 017914 129 V 129 (364)
Q Consensus 129 ~ 129 (364)
+
T Consensus 222 g 222 (340)
T 3gms_A 222 G 222 (340)
T ss_dssp C
T ss_pred C
Confidence 4
|
| >1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A | Back alignment and structure |
|---|
Probab=96.88 E-value=0.0008 Score=60.69 Aligned_cols=70 Identities=21% Similarity=0.191 Sum_probs=51.5
Q ss_pred CCeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCC---ceEEEccCChhhH-HhhccCceeeEEEEe
Q 017914 59 PNRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSG---FDVHLFNANETAL-MILTTLKNYTHLLVS 130 (364)
Q Consensus 59 ~~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~---~~~~~~D~~~~~~-~~~~~~d~v~~~~~~ 130 (364)
.++|+|+|+|.+|+.+++.|...|.+|++++|++++.+.+.+.+ +..+ +....++ +.+.++|.|++++..
T Consensus 167 ~~~VlViGaGgvG~~aa~~a~~~Ga~V~v~dr~~~r~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~DvVI~~~~~ 240 (361)
T 1pjc_A 167 PGKVVILGGGVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGSRVELL--YSNSAEIETAVAEADLLIGAVLV 240 (361)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGSEEE--ECCHHHHHHHHHTCSEEEECCCC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhhCceeEee--eCCHHHHHHHHcCCCEEEECCCc
Confidence 47999999999999999999999999999999988766554322 2122 1222233 556789999987753
|
| >3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii} | Back alignment and structure |
|---|
Probab=96.88 E-value=0.0014 Score=56.77 Aligned_cols=65 Identities=11% Similarity=0.118 Sum_probs=51.0
Q ss_pred CCeEEEEcCChhhHHHHHHHHhCCC---EEEEEEeCchhhhhhhhC-CceEEEccCChhhHHhhccCceeeEEE
Q 017914 59 PNRMLILGMGFVGRIFAEKIKNQGW---VVSGTCTNVMKKKELEQS-GFDVHLFNANETALMILTTLKNYTHLL 128 (364)
Q Consensus 59 ~~~vlVtGtG~iG~~l~~~L~~~g~---~V~~~~r~~~~~~~l~~~-~~~~~~~D~~~~~~~~~~~~d~v~~~~ 128 (364)
+|+|.|+|+|.+|..++..|.+.|+ +|++.+|++++...+.+. ++... .+ ..+.+.++|.|+-++
T Consensus 3 ~~~I~iIG~G~mG~aia~~l~~~g~~~~~V~v~dr~~~~~~~l~~~~gi~~~----~~-~~~~~~~aDvVilav 71 (280)
T 3tri_A 3 TSNITFIGGGNMARNIVVGLIANGYDPNRICVTNRSLDKLDFFKEKCGVHTT----QD-NRQGALNADVVVLAV 71 (280)
T ss_dssp CSCEEEESCSHHHHHHHHHHHHTTCCGGGEEEECSSSHHHHHHHHTTCCEEE----SC-HHHHHSSCSEEEECS
T ss_pred CCEEEEEcccHHHHHHHHHHHHCCCCCCeEEEEeCCHHHHHHHHHHcCCEEe----CC-hHHHHhcCCeEEEEe
Confidence 5789999999999999999999999 999999998887776543 55431 11 125677889888765
|
| >1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A | Back alignment and structure |
|---|
Probab=96.87 E-value=0.0056 Score=52.03 Aligned_cols=100 Identities=14% Similarity=0.056 Sum_probs=61.7
Q ss_pred CCCeEEEEcCChhhHHHHHHHHhCCC-EEEEEEeCch-------------------hhhhh----hh--CCc--eEEEcc
Q 017914 58 SPNRMLILGMGFVGRIFAEKIKNQGW-VVSGTCTNVM-------------------KKKEL----EQ--SGF--DVHLFN 109 (364)
Q Consensus 58 ~~~~vlVtGtG~iG~~l~~~L~~~g~-~V~~~~r~~~-------------------~~~~l----~~--~~~--~~~~~D 109 (364)
...+|+|+|.|.+|+.+++.|...|. ++++++++.- +...+ .+ +.+ +.+..+
T Consensus 27 ~~~~VlvvG~GglG~~va~~La~~Gvg~i~lvD~d~v~~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~~~~ 106 (251)
T 1zud_1 27 LDSQVLIIGLGGLGTPAALYLAGAGVGTLVLADDDDVHLSNLQRQILFTTEDIDRPKSQVSQQRLTQLNPDIQLTALQQR 106 (251)
T ss_dssp HTCEEEEECCSTTHHHHHHHHHHTTCSEEEEECCCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEECSC
T ss_pred hcCcEEEEccCHHHHHHHHHHHHcCCCeEEEEeCCCcccccCCCCccCChhhCCCHHHHHHHHHHHHHCCCCEEEEEecc
Confidence 45799999998899999999999996 6777765431 11111 11 233 344445
Q ss_pred CChhhH-HhhccCceeeEEEEecCCCCCCCChhhhHHHHHHHHhhcCCccEEEEEccceee
Q 017914 110 ANETAL-MILTTLKNYTHLLVSIPPLEGTGDPMLKHGELLRSTLMNGHLQWLGYLSSTGVY 169 (364)
Q Consensus 110 ~~~~~~-~~~~~~d~v~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~r~v~~Ss~~vy 169 (364)
+++.+. ..+.++|.|+.+.. +. .....+.+++...++. +|+.+..+.+
T Consensus 107 ~~~~~~~~~~~~~DvVi~~~d---------~~--~~r~~l~~~~~~~~~p-~i~~~~~g~~ 155 (251)
T 1zud_1 107 LTGEALKDAVARADVVLDCTD---------NM--ATRQEINAACVALNTP-LITASAVGFG 155 (251)
T ss_dssp CCHHHHHHHHHHCSEEEECCS---------SH--HHHHHHHHHHHHTTCC-EEEEEEEBTE
T ss_pred CCHHHHHHHHhcCCEEEECCC---------CH--HHHHHHHHHHHHhCCC-EEEEeccccc
Confidence 554443 56678898887642 11 2234556666666654 7776654433
|
| >3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=96.84 E-value=0.0012 Score=58.04 Aligned_cols=47 Identities=17% Similarity=0.172 Sum_probs=39.2
Q ss_pred CCCeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceE
Q 017914 58 SPNRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDV 105 (364)
Q Consensus 58 ~~~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~ 105 (364)
|+|+|+|+|+|.+|..++..|. .|++|++++|+.+..+.+.+.++..
T Consensus 1 M~mkI~IiGaGa~G~~~a~~L~-~g~~V~~~~r~~~~~~~l~~~G~~~ 47 (307)
T 3ego_A 1 MSLKIGIIGGGSVGLLCAYYLS-LYHDVTVVTRRQEQAAAIQSEGIRL 47 (307)
T ss_dssp -CCEEEEECCSHHHHHHHHHHH-TTSEEEEECSCHHHHHHHHHHCEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHh-cCCceEEEECCHHHHHHHHhCCceE
Confidence 3589999999999999999999 9999999999987666665555544
|
| >1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=96.84 E-value=0.0046 Score=55.49 Aligned_cols=95 Identities=16% Similarity=0.065 Sum_probs=63.4
Q ss_pred CCCCeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCCh-hhH-----Hhh-----ccCceee
Q 017914 57 QSPNRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANE-TAL-----MIL-----TTLKNYT 125 (364)
Q Consensus 57 ~~~~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~-~~~-----~~~-----~~~d~v~ 125 (364)
..+.+|||+|+|.+|...++.+...|.+|+++++++++.+.+.+.++.. ..|..+ .++ ... .++|.|+
T Consensus 167 ~~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~-~~~~~~~~~~~~~i~~~~~~~~g~g~D~vi 245 (352)
T 1e3j_A 167 QLGTTVLVIGAGPIGLVSVLAAKAYGAFVVCTARSPRRLEVAKNCGADV-TLVVDPAKEEESSIIERIRSAIGDLPNVTI 245 (352)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTCSE-EEECCTTTSCHHHHHHHHHHHSSSCCSEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHhCCCE-EEcCcccccHHHHHHHHhccccCCCCCEEE
Confidence 3567999999999999999999999999999999988877666666653 234442 221 222 3588888
Q ss_pred EEEEecCCCCCCCChhhhHHHHHHHHhhcCCccEEEEEcc
Q 017914 126 HLLVSIPPLEGTGDPMLKHGELLRSTLMNGHLQWLGYLSS 165 (364)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~r~v~~Ss 165 (364)
.+++. . ......+..++..| ++|.++.
T Consensus 246 d~~g~---------~--~~~~~~~~~l~~~G--~iv~~G~ 272 (352)
T 1e3j_A 246 DCSGN---------E--KCITIGINITRTGG--TLMLVGM 272 (352)
T ss_dssp ECSCC---------H--HHHHHHHHHSCTTC--EEEECSC
T ss_pred ECCCC---------H--HHHHHHHHHHhcCC--EEEEEec
Confidence 87642 1 12233445555544 7887653
|
| >4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus} | Back alignment and structure |
|---|
Probab=96.84 E-value=0.002 Score=57.66 Aligned_cols=93 Identities=14% Similarity=0.088 Sum_probs=60.9
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCChhhH-----Hhh--ccCceeeEEE
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETAL-----MIL--TTLKNYTHLL 128 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~-----~~~--~~~d~v~~~~ 128 (364)
..+.+|||+| +|.||...++.+...|.+|+++++++++.+.+.+.+...+ .|.. .++ ... .++|.|++++
T Consensus 158 ~~g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga~~v-~~~~-~~~~~~v~~~~~~~g~Dvvid~~ 235 (342)
T 4eye_A 158 RAGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAATEFVKSVGADIV-LPLE-EGWAKAVREATGGAGVDMVVDPI 235 (342)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHTCSEE-EESS-TTHHHHHHHHTTTSCEEEEEESC
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCcEE-ecCc-hhHHHHHHHHhCCCCceEEEECC
Confidence 3467999999 7999999999999999999999998887776665555432 2333 222 122 2578888876
Q ss_pred EecCCCCCCCChhhhHHHHHHHHhhcCCccEEEEEcc
Q 017914 129 VSIPPLEGTGDPMLKHGELLRSTLMNGHLQWLGYLSS 165 (364)
Q Consensus 129 ~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~r~v~~Ss 165 (364)
+. . .....+..++..| ++|.++.
T Consensus 236 g~--------~----~~~~~~~~l~~~G--~iv~~G~ 258 (342)
T 4eye_A 236 GG--------P----AFDDAVRTLASEG--RLLVVGF 258 (342)
T ss_dssp C--------------CHHHHHHTEEEEE--EEEEC--
T ss_pred ch--------h----HHHHHHHhhcCCC--EEEEEEc
Confidence 52 0 1233445555444 7887654
|
| >3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str} | Back alignment and structure |
|---|
Probab=96.83 E-value=0.0016 Score=58.43 Aligned_cols=72 Identities=18% Similarity=0.189 Sum_probs=55.4
Q ss_pred CCCeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccC--------C----------hh-hH-Hh
Q 017914 58 SPNRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNA--------N----------ET-AL-MI 117 (364)
Q Consensus 58 ~~~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~--------~----------~~-~~-~~ 117 (364)
.+.+|+|+|.|-+|...++.|...|.+|++++|++.+.+.+.+.+.+++..|. . +. ++ +.
T Consensus 183 ~~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~lGa~~~~l~~~~~~~~gya~~~~~~~~~~~~~~l~e~ 262 (381)
T 3p2y_A 183 KPASALVLGVGVAGLQALATAKRLGAKTTGYDVRPEVAEQVRSVGAQWLDLGIDAAGEGGYARELSEAERAQQQQALEDA 262 (381)
T ss_dssp CCCEEEEESCSHHHHHHHHHHHHHTCEEEEECSSGGGHHHHHHTTCEECCCC-------------CHHHHHHHHHHHHHH
T ss_pred CCCEEEEECchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeEEeccccccccccchhhhhHHHHhhhHHHHHHH
Confidence 45799999999999999999999999999999999887777666776654331 0 11 12 56
Q ss_pred hccCceeeEEEE
Q 017914 118 LTTLKNYTHLLV 129 (364)
Q Consensus 118 ~~~~d~v~~~~~ 129 (364)
+.++|.|+.++.
T Consensus 263 l~~aDIVI~tv~ 274 (381)
T 3p2y_A 263 ITKFDIVITTAL 274 (381)
T ss_dssp HTTCSEEEECCC
T ss_pred HhcCCEEEECCC
Confidence 688999997653
|
| >4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A* | Back alignment and structure |
|---|
Probab=96.81 E-value=0.0025 Score=61.19 Aligned_cols=70 Identities=16% Similarity=0.301 Sum_probs=59.6
Q ss_pred CCCCeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhC-CceEEEccCChhhH---HhhccCceeeE
Q 017914 57 QSPNRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQS-GFDVHLFNANETAL---MILTTLKNYTH 126 (364)
Q Consensus 57 ~~~~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~-~~~~~~~D~~~~~~---~~~~~~d~v~~ 126 (364)
...++|+|+|.|-+|+.+++.|.+.|++|++++.+++....+.+. ++.++.+|.++++. ..+..++.++-
T Consensus 125 ~~~~hviI~G~g~~g~~la~~L~~~~~~vvvid~~~~~~~~~~~~~~~~~i~Gd~~~~~~L~~a~i~~a~~vi~ 198 (565)
T 4gx0_A 125 DTRGHILIFGIDPITRTLIRKLESRNHLFVVVTDNYDQALHLEEQEGFKVVYGSPTDAHVLAGLRVAAARSIIA 198 (565)
T ss_dssp TCCSCEEEESCCHHHHHHHHHTTTTTCCEEEEESCHHHHHHHHHSCSSEEEESCTTCHHHHHHTTGGGCSEEEE
T ss_pred ccCCeEEEECCChHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHhcCCeEEEeCCCCHHHHHhcCcccCCEEEE
Confidence 345789999999999999999999999999999999888777777 99999999999874 33466777653
|
| >1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A* | Back alignment and structure |
|---|
Probab=96.81 E-value=0.0075 Score=52.99 Aligned_cols=67 Identities=15% Similarity=-0.004 Sum_probs=47.8
Q ss_pred CCeEEEEcCChhhHHHHHHHHhCCC-EEEEEEeCchhhhh----hhh------CCceEEE-ccCChhhHHhhccCceeeE
Q 017914 59 PNRMLILGMGFVGRIFAEKIKNQGW-VVSGTCTNVMKKKE----LEQ------SGFDVHL-FNANETALMILTTLKNYTH 126 (364)
Q Consensus 59 ~~~vlVtGtG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~----l~~------~~~~~~~-~D~~~~~~~~~~~~d~v~~ 126 (364)
+|+|.|+|+|.+|..++..|...|+ +|++++++.++.+. +.. ....+.. .|+ ..++++|.|+.
T Consensus 2 ~~kI~VIGaG~vG~~~a~~la~~g~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~t~d~-----~a~~~aD~Vi~ 76 (309)
T 1ur5_A 2 RKKISIIGAGFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGTNNY-----ADTANSDVIVV 76 (309)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEESCG-----GGGTTCSEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCCeEEEEeCCccHHHHHHHhHHHhHhhcCCCeEEEECCCH-----HHHCCCCEEEE
Confidence 4799999999999999999999997 98888887654432 111 1122221 222 46789999999
Q ss_pred EEEe
Q 017914 127 LLVS 130 (364)
Q Consensus 127 ~~~~ 130 (364)
.++.
T Consensus 77 a~g~ 80 (309)
T 1ur5_A 77 TSGA 80 (309)
T ss_dssp CCCC
T ss_pred cCCC
Confidence 8864
|
| >3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum} | Back alignment and structure |
|---|
Probab=96.80 E-value=0.0017 Score=57.90 Aligned_cols=46 Identities=20% Similarity=0.369 Sum_probs=37.9
Q ss_pred CCeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceE
Q 017914 59 PNRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDV 105 (364)
Q Consensus 59 ~~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~ 105 (364)
+|+|.|+|+|.+|..++..|.+.|++|++++|+ +..+.+.+.++.+
T Consensus 3 ~mkI~IiGaG~~G~~~a~~L~~~g~~V~~~~r~-~~~~~~~~~g~~~ 48 (335)
T 3ghy_A 3 LTRICIVGAGAVGGYLGARLALAGEAINVLARG-ATLQALQTAGLRL 48 (335)
T ss_dssp CCCEEEESCCHHHHHHHHHHHHTTCCEEEECCH-HHHHHHHHTCEEE
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCEEEEEECh-HHHHHHHHCCCEE
Confidence 479999999999999999999999999999996 4555555455443
|
| >3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A* | Back alignment and structure |
|---|
Probab=96.79 E-value=0.0011 Score=57.27 Aligned_cols=68 Identities=12% Similarity=0.081 Sum_probs=50.1
Q ss_pred CCCCeEEEEcCChhhHHHHHHHHhCCC-EEEEEEeCchhhhhhhhCCceEEEccCChhhHHhhccCceeeEEE
Q 017914 57 QSPNRMLILGMGFVGRIFAEKIKNQGW-VVSGTCTNVMKKKELEQSGFDVHLFNANETALMILTTLKNYTHLL 128 (364)
Q Consensus 57 ~~~~~vlVtGtG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~~~~~~~d~v~~~~ 128 (364)
..+++|+|+|+|.+|+.++..|.+.|. +|++.+|+.++...+.. .+..+ .+.+.. ..+.++|.|+++.
T Consensus 115 l~~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~-~~~~~--~~~~~~-~~~~~aDiVInaT 183 (277)
T 3don_A 115 IEDAYILILGAGGASKGIANELYKIVRPTLTVANRTMSRFNNWSL-NINKI--NLSHAE-SHLDEFDIIINTT 183 (277)
T ss_dssp GGGCCEEEECCSHHHHHHHHHHHTTCCSCCEEECSCGGGGTTCCS-CCEEE--CHHHHH-HTGGGCSEEEECC
T ss_pred cCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHH-hcccc--cHhhHH-HHhcCCCEEEECc
Confidence 346899999999999999999999998 89999999888766542 22222 222211 4467788888765
|
| >1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium} | Back alignment and structure |
|---|
Probab=96.79 E-value=0.0012 Score=57.68 Aligned_cols=64 Identities=14% Similarity=0.117 Sum_probs=46.4
Q ss_pred CCeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCChhhHHhhccCceeeEEE
Q 017914 59 PNRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETALMILTTLKNYTHLL 128 (364)
Q Consensus 59 ~~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~~~~~~~d~v~~~~ 128 (364)
+|+|.|+|+|.+|+.++..|.+.|++|++.+ ++++...+.+.++.. ..+.+ +.+.++|.|+.+.
T Consensus 3 ~m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~-~~~~~~~~~~~g~~~----~~~~~-~~~~~~D~vi~~v 66 (295)
T 1yb4_A 3 AMKLGFIGLGIMGSPMAINLARAGHQLHVTT-IGPVADELLSLGAVN----VETAR-QVTEFADIIFIMV 66 (295)
T ss_dssp -CEEEECCCSTTHHHHHHHHHHTTCEEEECC-SSCCCHHHHTTTCBC----CSSHH-HHHHTCSEEEECC
T ss_pred CCEEEEEccCHHHHHHHHHHHhCCCEEEEEc-CHHHHHHHHHcCCcc----cCCHH-HHHhcCCEEEEEC
Confidence 4799999999999999999999999999988 776666554444321 11222 4556788777765
|
| >1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A* | Back alignment and structure |
|---|
Probab=96.79 E-value=0.002 Score=58.97 Aligned_cols=42 Identities=14% Similarity=0.101 Sum_probs=37.1
Q ss_pred CeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCC
Q 017914 60 NRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSG 102 (364)
Q Consensus 60 ~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~ 102 (364)
|+|.|+|.|++|..++..|.+ |++|++++|++++.+.+.+.+
T Consensus 1 MkI~VIG~G~vG~~~A~~La~-G~~V~~~d~~~~~~~~l~~~~ 42 (402)
T 1dlj_A 1 MKIAVAGSGYVGLSLGVLLSL-QNEVTIVDILPSKVDKINNGL 42 (402)
T ss_dssp CEEEEECCSHHHHHHHHHHTT-TSEEEEECSCHHHHHHHHTTC
T ss_pred CEEEEECCCHHHHHHHHHHhC-CCEEEEEECCHHHHHHHHcCC
Confidence 589999999999999999999 999999999988777765444
|
| >3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti} | Back alignment and structure |
|---|
Probab=96.79 E-value=0.0027 Score=56.89 Aligned_cols=91 Identities=8% Similarity=0.091 Sum_probs=62.6
Q ss_pred CeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCChhhH-H----hh--ccCceeeEEEEec
Q 017914 60 NRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETAL-M----IL--TTLKNYTHLLVSI 131 (364)
Q Consensus 60 ~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~-~----~~--~~~d~v~~~~~~~ 131 (364)
++|||+| +|.||...++.+...|.+|++.++++++.+.+.+.+...+ .|..+.++ . .. .++|.|+.+++.
T Consensus 166 ~~vli~gg~g~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~~Ga~~~-~~~~~~~~~~~v~~~~~~~g~D~vid~~g~- 243 (349)
T 3pi7_A 166 KAFVMTAGASQLCKLIIGLAKEEGFRPIVTVRRDEQIALLKDIGAAHV-LNEKAPDFEATLREVMKAEQPRIFLDAVTG- 243 (349)
T ss_dssp SEEEESSTTSHHHHHHHHHHHHHTCEEEEEESCGGGHHHHHHHTCSEE-EETTSTTHHHHHHHHHHHHCCCEEEESSCH-
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCCEE-EECCcHHHHHHHHHHhcCCCCcEEEECCCC-
Confidence 6888886 9999999999999999999999998888776665565432 34444332 1 11 368999887642
Q ss_pred CCCCCCCChhhhHHHHHHHHhhcCCccEEEEEcc
Q 017914 132 PPLEGTGDPMLKHGELLRSTLMNGHLQWLGYLSS 165 (364)
Q Consensus 132 ~~~~~~~~~~~~~~~~l~~a~~~~~~~r~v~~Ss 165 (364)
. .....+..++..| ++|.++.
T Consensus 244 --------~---~~~~~~~~l~~~G--~iv~~G~ 264 (349)
T 3pi7_A 244 --------P---LASAIFNAMPKRA--RWIIYGR 264 (349)
T ss_dssp --------H---HHHHHHHHSCTTC--EEEECCC
T ss_pred --------h---hHHHHHhhhcCCC--EEEEEec
Confidence 1 1234455555554 7887764
|
| >4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A* | Back alignment and structure |
|---|
Probab=96.79 E-value=0.0029 Score=60.75 Aligned_cols=65 Identities=11% Similarity=-0.074 Sum_probs=54.6
Q ss_pred CeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCChhhH---HhhccCceeeEEE
Q 017914 60 NRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETAL---MILTTLKNYTHLL 128 (364)
Q Consensus 60 ~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~---~~~~~~d~v~~~~ 128 (364)
++|+|+|.|-+|+++++.|.+.|++|++++.+++....+ ..++.+|.+|.+. ..++.+|.++-+.
T Consensus 349 ~~viIiG~G~~G~~la~~L~~~g~~v~vid~d~~~~~~~----~~~i~gD~t~~~~L~~agi~~ad~vi~~~ 416 (565)
T 4gx0_A 349 ELIFIIGHGRIGCAAAAFLDRKPVPFILIDRQESPVCND----HVVVYGDATVGQTLRQAGIDRASGIIVTT 416 (565)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSCCSSCCS----SCEEESCSSSSTHHHHHTTTSCSEEEECC
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCCEEEEECChHHHhhc----CCEEEeCCCCHHHHHhcCccccCEEEEEC
Confidence 799999999999999999999999999999998876654 2899999999874 3456777766654
|
| >3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens} | Back alignment and structure |
|---|
Probab=96.78 E-value=0.0016 Score=57.51 Aligned_cols=46 Identities=20% Similarity=0.276 Sum_probs=36.2
Q ss_pred CCCeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceE
Q 017914 58 SPNRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDV 105 (364)
Q Consensus 58 ~~~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~ 105 (364)
|+|+|+|+|+|.+|..++..|.+.|++|++++|+. .+.+.+.++.+
T Consensus 1 M~mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~--~~~i~~~g~~~ 46 (312)
T 3hn2_A 1 MSLRIAIVGAGALGLYYGALLQRSGEDVHFLLRRD--YEAIAGNGLKV 46 (312)
T ss_dssp ---CEEEECCSTTHHHHHHHHHHTSCCEEEECSTT--HHHHHHTCEEE
T ss_pred CCCEEEEECcCHHHHHHHHHHHHCCCeEEEEEcCc--HHHHHhCCCEE
Confidence 34799999999999999999999999999999975 35555455543
|
| >2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A* | Back alignment and structure |
|---|
Probab=96.77 E-value=0.0015 Score=58.44 Aligned_cols=94 Identities=20% Similarity=0.223 Sum_probs=61.7
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhh-hCCceEEEccCChh-hH-Hhh-----ccCceeeEE
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELE-QSGFDVHLFNANET-AL-MIL-----TTLKNYTHL 127 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~-~~~~~~~~~D~~~~-~~-~~~-----~~~d~v~~~ 127 (364)
..+++|||+| +|.||..+++.+...|++|++++|++++.+.+. +.+...+ .|..+. ++ ..+ .++|.|+++
T Consensus 154 ~~g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~~g~~~~-~d~~~~~~~~~~~~~~~~~~~d~vi~~ 232 (345)
T 2j3h_A 154 KEGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDLLKTKFGFDDA-FNYKEESDLTAALKRCFPNGIDIYFEN 232 (345)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTSCCSEE-EETTSCSCSHHHHHHHCTTCEEEEEES
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCceE-EecCCHHHHHHHHHHHhCCCCcEEEEC
Confidence 3467999999 799999999999999999999999988776665 4555432 365542 22 111 246777776
Q ss_pred EEecCCCCCCCChhhhHHHHHHHHhhcCCccEEEEEcc
Q 017914 128 LVSIPPLEGTGDPMLKHGELLRSTLMNGHLQWLGYLSS 165 (364)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~r~v~~Ss 165 (364)
++. ......+..++..| ++|.++.
T Consensus 233 ~g~------------~~~~~~~~~l~~~G--~~v~~G~ 256 (345)
T 2j3h_A 233 VGG------------KMLDAVLVNMNMHG--RIAVCGM 256 (345)
T ss_dssp SCH------------HHHHHHHTTEEEEE--EEEECCC
T ss_pred CCH------------HHHHHHHHHHhcCC--EEEEEcc
Confidence 531 12233444444443 7887654
|
| >3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A* | Back alignment and structure |
|---|
Probab=96.77 E-value=0.0025 Score=54.59 Aligned_cols=63 Identities=21% Similarity=0.170 Sum_probs=47.9
Q ss_pred CCeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCChhhHHhhccCceeeEEE
Q 017914 59 PNRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETALMILTTLKNYTHLL 128 (364)
Q Consensus 59 ~~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~~~~~~~d~v~~~~ 128 (364)
+++|+|+|+|.+|+.++..|.+.|.+|++.+|+.++.+.+.+.++..+ ++.+ +.++|.|+++.
T Consensus 118 ~k~vlvlGaGGaaraia~~L~~~G~~v~V~nRt~~ka~~la~~~~~~~--~~~~-----l~~~DiVInaT 180 (269)
T 3phh_A 118 YQNALILGAGGSAKALACELKKQGLQVSVLNRSSRGLDFFQRLGCDCF--MEPP-----KSAFDLIINAT 180 (269)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTHHHHHHHTCEEE--SSCC-----SSCCSEEEECC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHCCCeEe--cHHH-----hccCCEEEEcc
Confidence 689999999999999999999999999999999888776643333332 2221 22678777765
|
| >1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6 | Back alignment and structure |
|---|
Probab=96.77 E-value=0.0021 Score=57.21 Aligned_cols=69 Identities=17% Similarity=0.035 Sum_probs=48.5
Q ss_pred CeEEEEcCChhhHHHHHHHHhCCCEEEEEEe--CchhhhhhhhCCceEEEc------cCChh-hH-HhhccCceeeEEE
Q 017914 60 NRMLILGMGFVGRIFAEKIKNQGWVVSGTCT--NVMKKKELEQSGFDVHLF------NANET-AL-MILTTLKNYTHLL 128 (364)
Q Consensus 60 ~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r--~~~~~~~l~~~~~~~~~~------D~~~~-~~-~~~~~~d~v~~~~ 128 (364)
|+|.|+|.|.+|..++..|.+.|++|++++| +++..+.+.+.+.....+ ...+. +. +.+.++|.|+.++
T Consensus 1 m~I~iiG~G~mG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~D~vi~~v 79 (335)
T 1txg_A 1 MIVSILGAGAMGSALSVPLVDNGNEVRIWGTEFDTEILKSISAGREHPRLGVKLNGVEIFWPEQLEKCLENAEVVLLGV 79 (335)
T ss_dssp CEEEEESCCHHHHHHHHHHHHHCCEEEEECCGGGHHHHHHHHTTCCBTTTTBCCCSEEEECGGGHHHHHTTCSEEEECS
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEEccCCHHHHHHHHHhCcCcccCccccceEEecHHhHHHHHhcCCEEEEcC
Confidence 5899999999999999999999999999999 877766665443210000 11111 22 4567888888765
|
| >4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea} | Back alignment and structure |
|---|
Probab=96.75 E-value=0.0045 Score=57.19 Aligned_cols=42 Identities=24% Similarity=0.336 Sum_probs=38.0
Q ss_pred CCeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhh
Q 017914 59 PNRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQ 100 (364)
Q Consensus 59 ~~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~ 100 (364)
..+|.|+|.|++|..++..|.+.||+|++++|++++.+.+.+
T Consensus 8 ~~~~~vIGlG~vG~~~A~~La~~G~~V~~~D~~~~kv~~l~~ 49 (446)
T 4a7p_A 8 SVRIAMIGTGYVGLVSGACFSDFGHEVVCVDKDARKIELLHQ 49 (446)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCSTTHHHHTT
T ss_pred ceEEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHhc
Confidence 358999999999999999999999999999999988777654
|
| >3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A* | Back alignment and structure |
|---|
Probab=96.74 E-value=0.0022 Score=56.66 Aligned_cols=70 Identities=17% Similarity=0.053 Sum_probs=50.6
Q ss_pred CCCCCeEEEEcCChhhHHHHHHHHhCCC--EEEEEEeCchhhhh----hhh-----CCceEEEccCChhhHHhhccCcee
Q 017914 56 WQSPNRMLILGMGFVGRIFAEKIKNQGW--VVSGTCTNVMKKKE----LEQ-----SGFDVHLFNANETALMILTTLKNY 124 (364)
Q Consensus 56 ~~~~~~vlVtGtG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~----l~~-----~~~~~~~~D~~~~~~~~~~~~d~v 124 (364)
...+++|.|+|+|.+|+.++..|+..|. ++++++++.++.+. +.. ..+.+...| ...++++|.|
T Consensus 6 ~~~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~i~~~~-----~~a~~~aDiV 80 (326)
T 3vku_A 6 DKDHQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLEDALPFTSPKKIYSAE-----YSDAKDADLV 80 (326)
T ss_dssp -CCCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEECC-----GGGGTTCSEE
T ss_pred cCCCCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHhhHhhhhhhcCCcEEEECc-----HHHhcCCCEE
Confidence 3456899999999999999999999886 89999997765432 221 123333222 2578899999
Q ss_pred eEEEEe
Q 017914 125 THLLVS 130 (364)
Q Consensus 125 ~~~~~~ 130 (364)
+..++.
T Consensus 81 vi~ag~ 86 (326)
T 3vku_A 81 VITAGA 86 (326)
T ss_dssp EECCCC
T ss_pred EECCCC
Confidence 998865
|
| >1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=96.74 E-value=0.0067 Score=53.22 Aligned_cols=66 Identities=12% Similarity=0.042 Sum_probs=49.7
Q ss_pred CCCCeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCChhhHHhhccCceeeEEEE
Q 017914 57 QSPNRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETALMILTTLKNYTHLLV 129 (364)
Q Consensus 57 ~~~~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~~~~~~~d~v~~~~~ 129 (364)
..+++|.|+|.|.||+.+++.|...|++|++.+|+... ......++... +.+ +.+..+|.|+.+..
T Consensus 140 l~g~~vgIiG~G~IG~~~A~~l~~~G~~V~~~d~~~~~-~~~~~~g~~~~-----~l~-ell~~aDvV~l~~p 205 (307)
T 1wwk_A 140 LEGKTIGIIGFGRIGYQVAKIANALGMNILLYDPYPNE-ERAKEVNGKFV-----DLE-TLLKESDVVTIHVP 205 (307)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCH-HHHHHTTCEEC-----CHH-HHHHHCSEEEECCC
T ss_pred cCCceEEEEccCHHHHHHHHHHHHCCCEEEEECCCCCh-hhHhhcCcccc-----CHH-HHHhhCCEEEEecC
Confidence 45789999999999999999999999999999998765 22333455431 222 56678898887653
|
| >4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=96.74 E-value=0.003 Score=57.19 Aligned_cols=73 Identities=14% Similarity=0.163 Sum_probs=55.5
Q ss_pred CCCeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccC----------------Chh-------h
Q 017914 58 SPNRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNA----------------NET-------A 114 (364)
Q Consensus 58 ~~~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~----------------~~~-------~ 114 (364)
...+|+|+|.|-+|...++.+...|.+|+++++++.+.+.+.+.+..++..++ ++. .
T Consensus 189 ~~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~~G~~~~~~~~~~~~d~~~~~~ya~e~s~~~~~~~~~~ 268 (405)
T 4dio_A 189 PAAKIFVMGAGVAGLQAIATARRLGAVVSATDVRPAAKEQVASLGAKFIAVEDEEFKAAETAGGYAKEMSGEYQVKQAAL 268 (405)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSTTHHHHHHHTTCEECCCCC-----------------CHHHHHHHHH
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHcCCceeecccccccccccccchhhhcchhhhhhhHhH
Confidence 35799999999999999999999999999999998877766656666544332 111 1
Q ss_pred H-HhhccCceeeEEEEe
Q 017914 115 L-MILTTLKNYTHLLVS 130 (364)
Q Consensus 115 ~-~~~~~~d~v~~~~~~ 130 (364)
+ +.+.++|+|+.++..
T Consensus 269 l~e~l~~aDVVI~tvli 285 (405)
T 4dio_A 269 VAEHIAKQDIVITTALI 285 (405)
T ss_dssp HHHHHHTCSEEEECCCC
T ss_pred HHHHhcCCCEEEECCcC
Confidence 2 566889999987643
|
| >1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A | Back alignment and structure |
|---|
Probab=96.74 E-value=0.008 Score=53.97 Aligned_cols=95 Identities=13% Similarity=0.036 Sum_probs=63.7
Q ss_pred CCCCeEEEEcCChhhHHHHHHHHhCCC-EEEEEEeCchhhhhhhhCCceEEEccCC---hhhH-Hhh-----ccCceeeE
Q 017914 57 QSPNRMLILGMGFVGRIFAEKIKNQGW-VVSGTCTNVMKKKELEQSGFDVHLFNAN---ETAL-MIL-----TTLKNYTH 126 (364)
Q Consensus 57 ~~~~~vlVtGtG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~l~~~~~~~~~~D~~---~~~~-~~~-----~~~d~v~~ 126 (364)
..+.+|||+|+|.+|...++.+...|. +|+++++++++.+.+.+.++..+ .|.. +.++ ..+ .++|.|+.
T Consensus 170 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~v-i~~~~~~~~~~~~~i~~~~~~g~D~vid 248 (356)
T 1pl8_A 170 TLGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGADLV-LQISKESPQEIARKVEGQLGCKPEVTIE 248 (356)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCSEE-EECSSCCHHHHHHHHHHHHTSCCSEEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEE-EcCcccccchHHHHHHHHhCCCCCEEEE
Confidence 456799999999999999999988998 99999999887776666666532 3444 2332 111 36888888
Q ss_pred EEEecCCCCCCCChhhhHHHHHHHHhhcCCccEEEEEcc
Q 017914 127 LLVSIPPLEGTGDPMLKHGELLRSTLMNGHLQWLGYLSS 165 (364)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~r~v~~Ss 165 (364)
+++. . ......++.++..| ++|.++.
T Consensus 249 ~~g~---------~--~~~~~~~~~l~~~G--~iv~~G~ 274 (356)
T 1pl8_A 249 CTGA---------E--ASIQAGIYATRSGG--TLVLVGL 274 (356)
T ss_dssp CSCC---------H--HHHHHHHHHSCTTC--EEEECSC
T ss_pred CCCC---------h--HHHHHHHHHhcCCC--EEEEEec
Confidence 7642 1 12234455555544 7887653
|
| >1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A* | Back alignment and structure |
|---|
Probab=96.74 E-value=0.0012 Score=57.50 Aligned_cols=67 Identities=21% Similarity=0.228 Sum_probs=45.6
Q ss_pred CeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhC---CceE-EEccCChhhHHhhccCceeeEEE
Q 017914 60 NRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQS---GFDV-HLFNANETALMILTTLKNYTHLL 128 (364)
Q Consensus 60 ~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~---~~~~-~~~D~~~~~~~~~~~~d~v~~~~ 128 (364)
|+|.|+|.|.+|..++..|.+.|++|++++|++++...+... +..+ ......+. ..+.++|.|+-+.
T Consensus 1 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~--~~~~~~d~vi~~v 71 (291)
T 1ks9_A 1 MKITVLGCGALGQLWLTALCKQGHEVQGWLRVPQPYCSVNLVETDGSIFNESLTANDP--DFLATSDLLLVTL 71 (291)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCSEEEEEEECTTSCEEEEEEEESCH--HHHHTCSEEEECS
T ss_pred CeEEEECcCHHHHHHHHHHHhCCCCEEEEEcCccceeeEEEEcCCCceeeeeeeecCc--cccCCCCEEEEEe
Confidence 589999999999999999999999999999987654433211 1100 00111111 3556788887765
|
| >1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=96.73 E-value=0.002 Score=57.44 Aligned_cols=46 Identities=22% Similarity=0.232 Sum_probs=38.6
Q ss_pred CCCCeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCC
Q 017914 57 QSPNRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSG 102 (364)
Q Consensus 57 ~~~~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~ 102 (364)
.+.|+|.|+|+|.+|..++..|.+.|++|++.+|++++.+.+.+.+
T Consensus 12 ~~~~kI~iIG~G~mG~ala~~L~~~G~~V~~~~r~~~~~~~l~~~g 57 (335)
T 1z82_A 12 HMEMRFFVLGAGSWGTVFAQMLHENGEEVILWARRKEIVDLINVSH 57 (335)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHS
T ss_pred ccCCcEEEECcCHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHhC
Confidence 4568999999999999999999999999999999887766665433
|
| >2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus} | Back alignment and structure |
|---|
Probab=96.73 E-value=0.0013 Score=57.58 Aligned_cols=71 Identities=14% Similarity=0.063 Sum_probs=51.5
Q ss_pred CCCCeEEEEcCChhhHHHHHHHHhCCC-EEEEEEeCchhhhhhhhC-Cc---eEEEccCChhhHHhhccCceeeEEEEe
Q 017914 57 QSPNRMLILGMGFVGRIFAEKIKNQGW-VVSGTCTNVMKKKELEQS-GF---DVHLFNANETALMILTTLKNYTHLLVS 130 (364)
Q Consensus 57 ~~~~~vlVtGtG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~l~~~-~~---~~~~~D~~~~~~~~~~~~d~v~~~~~~ 130 (364)
..+++|+|+|+|.+|+.++..|.+.|. +|++.+|+.++...+.+. +. .++ ++.+.. ..+.++|.|+++...
T Consensus 139 l~~~~vlVlGaGg~g~aia~~L~~~G~~~V~v~nR~~~ka~~la~~~~~~~~~~~--~~~~~~-~~~~~aDivIn~t~~ 214 (297)
T 2egg_A 139 LDGKRILVIGAGGGARGIYFSLLSTAAERIDMANRTVEKAERLVREGDERRSAYF--SLAEAE-TRLAEYDIIINTTSV 214 (297)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHSCSSSCCEE--CHHHHH-HTGGGCSEEEECSCT
T ss_pred CCCCEEEEECcHHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhhhccCcee--eHHHHH-hhhccCCEEEECCCC
Confidence 456899999999999999999999997 999999998876655321 11 221 221111 456788999888753
|
| >3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A* | Back alignment and structure |
|---|
Probab=96.72 E-value=0.0038 Score=55.71 Aligned_cols=95 Identities=18% Similarity=0.120 Sum_probs=63.2
Q ss_pred CCCCeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCChhhH-Hhh----ccCceeeEEEEec
Q 017914 57 QSPNRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETAL-MIL----TTLKNYTHLLVSI 131 (364)
Q Consensus 57 ~~~~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~-~~~----~~~d~v~~~~~~~ 131 (364)
..+.+|||+|+|.+|...++.+...|.+|+++++++++.+.+.+.+...+ .|..+.++ +.+ .++|.|+.+++.
T Consensus 165 ~~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~~-i~~~~~~~~~~~~~~~g~~d~vid~~g~- 242 (340)
T 3s2e_A 165 RPGQWVVISGIGGLGHVAVQYARAMGLRVAAVDIDDAKLNLARRLGAEVA-VNARDTDPAAWLQKEIGGAHGVLVTAVS- 242 (340)
T ss_dssp CTTSEEEEECCSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTCSEE-EETTTSCHHHHHHHHHSSEEEEEESSCC-
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHcCCCEE-EeCCCcCHHHHHHHhCCCCCEEEEeCCC-
Confidence 45679999998889999999999999999999999888877776666543 34444333 222 256666665421
Q ss_pred CCCCCCCChhhhHHHHHHHHhhcCCccEEEEEcc
Q 017914 132 PPLEGTGDPMLKHGELLRSTLMNGHLQWLGYLSS 165 (364)
Q Consensus 132 ~~~~~~~~~~~~~~~~l~~a~~~~~~~r~v~~Ss 165 (364)
.......+..++..| +++.++.
T Consensus 243 ----------~~~~~~~~~~l~~~G--~iv~~G~ 264 (340)
T 3s2e_A 243 ----------PKAFSQAIGMVRRGG--TIALNGL 264 (340)
T ss_dssp ----------HHHHHHHHHHEEEEE--EEEECSC
T ss_pred ----------HHHHHHHHHHhccCC--EEEEeCC
Confidence 122334455555544 7876653
|
| >3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A* | Back alignment and structure |
|---|
Probab=96.72 E-value=0.0063 Score=55.85 Aligned_cols=43 Identities=19% Similarity=0.349 Sum_probs=38.4
Q ss_pred CCeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhC
Q 017914 59 PNRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQS 101 (364)
Q Consensus 59 ~~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~ 101 (364)
+.+..|+|.|++|..++..|.+.||+|++++|++++.+.+.+.
T Consensus 11 ~~~~~ViGlGyvGlp~A~~La~~G~~V~~~D~~~~kv~~L~~g 53 (431)
T 3ojo_A 11 GSKLTVVGLGYIGLPTSIMFAKHGVDVLGVDINQQTIDKLQNG 53 (431)
T ss_dssp -CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTT
T ss_pred CCccEEEeeCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHCC
Confidence 4688999999999999999999999999999999988877653
|
| >2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A* | Back alignment and structure |
|---|
Probab=96.72 E-value=0.0065 Score=54.02 Aligned_cols=66 Identities=11% Similarity=0.067 Sum_probs=49.0
Q ss_pred CCCCeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCChhhHHhhccCceeeEEEE
Q 017914 57 QSPNRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETALMILTTLKNYTHLLV 129 (364)
Q Consensus 57 ~~~~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~~~~~~~d~v~~~~~ 129 (364)
..+++|.|+|.|.||+.+++.|...|++|++.+|+.+. ......++.. .+.+ ..+..+|.|+.++.
T Consensus 148 l~g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~~-~~~~~~g~~~-----~~l~-~~l~~aDvVil~vp 213 (334)
T 2dbq_A 148 VYGKTIGIIGLGRIGQAIAKRAKGFNMRILYYSRTRKE-EVERELNAEF-----KPLE-DLLRESDFVVLAVP 213 (334)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCH-HHHHHHCCEE-----CCHH-HHHHHCSEEEECCC
T ss_pred CCCCEEEEEccCHHHHHHHHHHHhCCCEEEEECCCcch-hhHhhcCccc-----CCHH-HHHhhCCEEEECCC
Confidence 45689999999999999999999999999999998765 3222234332 1222 46778898887663
|
| >3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis} | Back alignment and structure |
|---|
Probab=96.72 E-value=0.0012 Score=56.86 Aligned_cols=65 Identities=18% Similarity=0.222 Sum_probs=48.4
Q ss_pred CCeEEEEcCChhhHHHHHHHHhCCCE-EEEEEeCchhhhhhhhC-CceEEEccCChhhHHhhccCceeeEEE
Q 017914 59 PNRMLILGMGFVGRIFAEKIKNQGWV-VSGTCTNVMKKKELEQS-GFDVHLFNANETALMILTTLKNYTHLL 128 (364)
Q Consensus 59 ~~~vlVtGtG~iG~~l~~~L~~~g~~-V~~~~r~~~~~~~l~~~-~~~~~~~D~~~~~~~~~~~~d~v~~~~ 128 (364)
+|+|.|+|+|.+|+.++..|.+.|++ |.+.+|++++.+.+.+. ++... .|+ + +.+.++|.|+.+.
T Consensus 10 ~m~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~~~~~~~~~~~~~~g~~~~-~~~---~-~~~~~~Dvvi~av 76 (266)
T 3d1l_A 10 DTPIVLIGAGNLATNLAKALYRKGFRIVQVYSRTEESARELAQKVEAEYT-TDL---A-EVNPYAKLYIVSL 76 (266)
T ss_dssp GCCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSHHHHHHHHHHTTCEEE-SCG---G-GSCSCCSEEEECC
T ss_pred CCeEEEEcCCHHHHHHHHHHHHCCCeEEEEEeCCHHHHHHHHHHcCCcee-CCH---H-HHhcCCCEEEEec
Confidence 47899999999999999999999998 88999988776655432 44431 222 1 3456788887765
|
| >3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A | Back alignment and structure |
|---|
Probab=96.71 E-value=0.0024 Score=55.57 Aligned_cols=66 Identities=14% Similarity=0.174 Sum_probs=48.4
Q ss_pred CCeEEEEcCChhhHHHHHHHHhC--CCEEEEEEeCchhhhhhhhCCce-EEEccCChhhHHhhccCceeeEEE
Q 017914 59 PNRMLILGMGFVGRIFAEKIKNQ--GWVVSGTCTNVMKKKELEQSGFD-VHLFNANETALMILTTLKNYTHLL 128 (364)
Q Consensus 59 ~~~vlVtGtG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~l~~~~~~-~~~~D~~~~~~~~~~~~d~v~~~~ 128 (364)
+|+|.|+|+|.+|..++..|.+. |++|++.+|+++..+.+.+.++. ....|+. ..+.++|.|+.++
T Consensus 6 ~~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~~g~~~~~~~~~~----~~~~~aDvVilav 74 (290)
T 3b1f_A 6 EKTIYIAGLGLIGASLALGIKRDHPHYKIVGYNRSDRSRDIALERGIVDEATADFK----VFAALADVIILAV 74 (290)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSHHHHHHHHHTTSCSEEESCTT----TTGGGCSEEEECS
T ss_pred cceEEEEeeCHHHHHHHHHHHhCCCCcEEEEEcCCHHHHHHHHHcCCcccccCCHH----HhhcCCCEEEEcC
Confidence 57999999999999999999987 68999999988776665444432 1122222 3456788887765
|
| >3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021} | Back alignment and structure |
|---|
Probab=96.71 E-value=0.0035 Score=56.54 Aligned_cols=94 Identities=14% Similarity=0.041 Sum_probs=62.9
Q ss_pred CCCCeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCChhhH-----Hhh--ccCceeeEEEE
Q 017914 57 QSPNRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETAL-----MIL--TTLKNYTHLLV 129 (364)
Q Consensus 57 ~~~~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~-----~~~--~~~d~v~~~~~ 129 (364)
..+.+|||+|+|.+|...++.+...|.+|+++++++++.+.+.+.++..+. |..+.++ ... .++|.|+.+++
T Consensus 188 ~~g~~VlV~G~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~vi-~~~~~~~~~~v~~~~~g~g~D~vid~~g 266 (363)
T 3uog_A 188 RAGDRVVVQGTGGVALFGLQIAKATGAEVIVTSSSREKLDRAFALGADHGI-NRLEEDWVERVYALTGDRGADHILEIAG 266 (363)
T ss_dssp CTTCEEEEESSBHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTCSEEE-ETTTSCHHHHHHHHHTTCCEEEEEEETT
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEecCchhHHHHHHcCCCEEE-cCCcccHHHHHHHHhCCCCceEEEECCC
Confidence 356799999999999999999999999999999998887766665654332 3221222 111 26788887764
Q ss_pred ecCCCCCCCChhhhHHHHHHHHhhcCCccEEEEEcc
Q 017914 130 SIPPLEGTGDPMLKHGELLRSTLMNGHLQWLGYLSS 165 (364)
Q Consensus 130 ~~~~~~~~~~~~~~~~~~l~~a~~~~~~~r~v~~Ss 165 (364)
. . .....+..++..| ++|.++.
T Consensus 267 ~--------~----~~~~~~~~l~~~G--~iv~~G~ 288 (363)
T 3uog_A 267 G--------A----GLGQSLKAVAPDG--RISVIGV 288 (363)
T ss_dssp S--------S----CHHHHHHHEEEEE--EEEEECC
T ss_pred h--------H----HHHHHHHHhhcCC--EEEEEec
Confidence 1 1 1233445555544 7887764
|
| >2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A* | Back alignment and structure |
|---|
Probab=96.71 E-value=0.0016 Score=57.68 Aligned_cols=68 Identities=9% Similarity=0.114 Sum_probs=48.6
Q ss_pred CCCCCeEEEEcCChhhHHHHHHHHhCC----CEEEEEEeCch--hhhhhhhCCceEEEccCChhhHHhhccCceeeEEE
Q 017914 56 WQSPNRMLILGMGFVGRIFAEKIKNQG----WVVSGTCTNVM--KKKELEQSGFDVHLFNANETALMILTTLKNYTHLL 128 (364)
Q Consensus 56 ~~~~~~vlVtGtG~iG~~l~~~L~~~g----~~V~~~~r~~~--~~~~l~~~~~~~~~~D~~~~~~~~~~~~d~v~~~~ 128 (364)
++.+|+|.|+|.|.+|..++..|.+.| ++|++.+|+++ +.+.+...++.+. . +.. +.+..+|.|+-++
T Consensus 19 ~~~~mkI~iIG~G~mG~ala~~L~~~G~~~~~~V~v~~r~~~~~~~~~l~~~G~~~~-~---~~~-e~~~~aDvVilav 92 (322)
T 2izz_A 19 YFQSMSVGFIGAGQLAFALAKGFTAAGVLAAHKIMASSPDMDLATVSALRKMGVKLT-P---HNK-ETVQHSDVLFLAV 92 (322)
T ss_dssp ---CCCEEEESCSHHHHHHHHHHHHTTSSCGGGEEEECSCTTSHHHHHHHHHTCEEE-S---CHH-HHHHHCSEEEECS
T ss_pred ccCCCEEEEECCCHHHHHHHHHHHHCCCCCcceEEEECCCccHHHHHHHHHcCCEEe-C---ChH-HHhccCCEEEEEe
Confidence 344579999999999999999999999 89999999875 5555544455432 1 111 4556788887765
|
| >2ozp_A N-acetyl-gamma-glutamyl-phosphate reductase; amino acid biosynthesis, structural genomics, riken structur genomics/proteomics initiative; 2.01A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=96.70 E-value=0.0018 Score=57.80 Aligned_cols=91 Identities=13% Similarity=0.006 Sum_probs=52.7
Q ss_pred CCeEEEEc-CChhhHHHHHHHHhCC-CEEEEEEeCchhhhhhhh-----CCceEEEccCChhhHHhhccCceeeEEEEec
Q 017914 59 PNRMLILG-MGFVGRIFAEKIKNQG-WVVSGTCTNVMKKKELEQ-----SGFDVHLFNANETALMILTTLKNYTHLLVSI 131 (364)
Q Consensus 59 ~~~vlVtG-tG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~l~~-----~~~~~~~~D~~~~~~~~~~~~d~v~~~~~~~ 131 (364)
+++|.|.| +|.+|+.+++.|.++. .+++++.+.......+.+ .+.. ...+.+.+ . +.++|.|+.+...
T Consensus 4 ~~kV~IiGAtG~iG~~llr~L~~~p~~elv~v~s~~~~g~~~~~~~~~~~g~~--~~~~~~~~-~-~~~vDvV~~a~g~- 78 (345)
T 2ozp_A 4 KKTLSIVGASGYAGGEFLRLALSHPYLEVKQVTSRRFAGEPVHFVHPNLRGRT--NLKFVPPE-K-LEPADILVLALPH- 78 (345)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHTCTTEEEEEEBCSTTTTSBGGGTCGGGTTTC--CCBCBCGG-G-CCCCSEEEECCCT-
T ss_pred CCEEEEECCCCHHHHHHHHHHHcCCCcEEEEEECchhhCchhHHhCchhcCcc--cccccchh-H-hcCCCEEEEcCCc-
Confidence 57999999 9999999999999875 488887764332222211 1100 01112222 2 4678888876531
Q ss_pred CCCCCCCChhhhHHHHHHHHhhcCCccEEEEEccc
Q 017914 132 PPLEGTGDPMLKHGELLRSTLMNGHLQWLGYLSST 166 (364)
Q Consensus 132 ~~~~~~~~~~~~~~~~l~~a~~~~~~~r~v~~Ss~ 166 (364)
.....+...+.+.|+ ++|-+|+.
T Consensus 79 -----------~~s~~~a~~~~~aG~-~VId~Sa~ 101 (345)
T 2ozp_A 79 -----------GVFAREFDRYSALAP-VLVDLSAD 101 (345)
T ss_dssp -----------THHHHTHHHHHTTCS-EEEECSST
T ss_pred -----------HHHHHHHHHHHHCCC-EEEEcCcc
Confidence 112233334445676 48878874
|
| >3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans} | Back alignment and structure |
|---|
Probab=96.69 E-value=0.0032 Score=56.26 Aligned_cols=91 Identities=14% Similarity=-0.020 Sum_probs=60.8
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCChhhH-----Hhh--ccCceeeEEE
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETAL-----MIL--TTLKNYTHLL 128 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~-----~~~--~~~d~v~~~~ 128 (364)
..+.+|||+| +|.+|...++.+...|.+|+++ +++++.+.+.+.+... .| .+.++ ... .++|.|+.++
T Consensus 149 ~~g~~VlV~Ga~g~iG~~~~q~a~~~Ga~Vi~~-~~~~~~~~~~~lGa~~--i~-~~~~~~~~~~~~~~~~g~D~vid~~ 224 (343)
T 3gaz_A 149 QDGQTVLIQGGGGGVGHVAIQIALARGARVFAT-ARGSDLEYVRDLGATP--ID-ASREPEDYAAEHTAGQGFDLVYDTL 224 (343)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-ECHHHHHHHHHHTSEE--EE-TTSCHHHHHHHHHTTSCEEEEEESS
T ss_pred CCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEE-eCHHHHHHHHHcCCCE--ec-cCCCHHHHHHHHhcCCCceEEEECC
Confidence 3467999999 8999999999999999999999 7777776666666665 34 33222 111 3578877765
Q ss_pred EecCCCCCCCChhhhHHHHHHHHhhcCCccEEEEEcc
Q 017914 129 VSIPPLEGTGDPMLKHGELLRSTLMNGHLQWLGYLSS 165 (364)
Q Consensus 129 ~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~r~v~~Ss 165 (364)
+. ......+..++..| ++|.++.
T Consensus 225 g~------------~~~~~~~~~l~~~G--~iv~~g~ 247 (343)
T 3gaz_A 225 GG------------PVLDASFSAVKRFG--HVVSCLG 247 (343)
T ss_dssp CT------------HHHHHHHHHEEEEE--EEEESCC
T ss_pred Cc------------HHHHHHHHHHhcCC--eEEEEcc
Confidence 31 12233444555443 7776654
|
| >3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii} | Back alignment and structure |
|---|
Probab=96.68 E-value=0.00087 Score=60.23 Aligned_cols=43 Identities=21% Similarity=0.180 Sum_probs=37.6
Q ss_pred CCCeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhh
Q 017914 58 SPNRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQ 100 (364)
Q Consensus 58 ~~~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~ 100 (364)
.+|+|.|+|+|.+|..++..|.+.|++|++.+|+++..+.+.+
T Consensus 28 ~~mkI~VIGaG~mG~alA~~La~~G~~V~l~~r~~~~~~~i~~ 70 (356)
T 3k96_A 28 FKHPIAILGAGSWGTALALVLARKGQKVRLWSYESDHVDEMQA 70 (356)
T ss_dssp CCSCEEEECCSHHHHHHHHHHHTTTCCEEEECSCHHHHHHHHH
T ss_pred cCCeEEEECccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHH
Confidence 3579999999999999999999999999999998877665543
|
| >1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A* | Back alignment and structure |
|---|
Probab=96.67 E-value=0.0018 Score=55.56 Aligned_cols=63 Identities=16% Similarity=0.185 Sum_probs=47.3
Q ss_pred CeEEEEcCChhhHHHHHHHHhCC-CEEEEEEeCchhhhhhhhC-CceEEEccCChhhHHhhccCceeeEEE
Q 017914 60 NRMLILGMGFVGRIFAEKIKNQG-WVVSGTCTNVMKKKELEQS-GFDVHLFNANETALMILTTLKNYTHLL 128 (364)
Q Consensus 60 ~~vlVtGtG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~l~~~-~~~~~~~D~~~~~~~~~~~~d~v~~~~ 128 (364)
|+|.|+|+|.+|+.++..|.+.| ++|++.+|++++...+... ++... .|.. +.+ ++|.|+.+.
T Consensus 1 m~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~~~~g~~~~-~~~~----~~~-~~D~vi~~v 65 (263)
T 1yqg_A 1 MNVYFLGGGNMAAAVAGGLVKQGGYRIYIANRGAEKRERLEKELGVETS-ATLP----ELH-SDDVLILAV 65 (263)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSCEEEEECSSHHHHHHHHHHTCCEEE-SSCC----CCC-TTSEEEECS
T ss_pred CEEEEECchHHHHHHHHHHHHCCCCeEEEECCCHHHHHHHHHhcCCEEe-CCHH----HHh-cCCEEEEEe
Confidence 58999999999999999999999 9999999998877666542 55432 2222 234 677777654
|
| >3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032} | Back alignment and structure |
|---|
Probab=96.66 E-value=0.0022 Score=57.04 Aligned_cols=70 Identities=19% Similarity=0.198 Sum_probs=48.7
Q ss_pred CCCeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCChhhHHhhccCceeeEEE
Q 017914 58 SPNRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETALMILTTLKNYTHLL 128 (364)
Q Consensus 58 ~~~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~~~~~~~d~v~~~~ 128 (364)
..++|.|+|.|.+|..+++.|.+.|++|++.+|+++..+...+.++.. ..|+.+.-.....++|.|+-++
T Consensus 7 ~~~kIgIIG~G~mG~slA~~L~~~G~~V~~~dr~~~~~~~a~~~G~~~-~~~~~e~~~~a~~~aDlVilav 76 (341)
T 3ktd_A 7 ISRPVCILGLGLIGGSLLRDLHAANHSVFGYNRSRSGAKSAVDEGFDV-SADLEATLQRAAAEDALIVLAV 76 (341)
T ss_dssp CSSCEEEECCSHHHHHHHHHHHHTTCCEEEECSCHHHHHHHHHTTCCE-ESCHHHHHHHHHHTTCEEEECS
T ss_pred CCCEEEEEeecHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCee-eCCHHHHHHhcccCCCEEEEeC
Confidence 347899999999999999999999999999999988766665566532 1121110001233567776654
|
| >2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=96.66 E-value=0.0029 Score=58.23 Aligned_cols=93 Identities=18% Similarity=0.172 Sum_probs=62.3
Q ss_pred CCeEEEEcCChhhHHHHHHHHhC-CC---EEEEEEeCchhhhhhhhCCceEEEccCChhhH-----HhhccCceeeEEEE
Q 017914 59 PNRMLILGMGFVGRIFAEKIKNQ-GW---VVSGTCTNVMKKKELEQSGFDVHLFNANETAL-----MILTTLKNYTHLLV 129 (364)
Q Consensus 59 ~~~vlVtGtG~iG~~l~~~L~~~-g~---~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~-----~~~~~~d~v~~~~~ 129 (364)
.++|+|+|.|.||+.+++.|.++ ++ +|++.+......+.....++.+...++++.+. .++++.|.|++++.
T Consensus 13 ~~rVlIIGaGgVG~~va~lla~~~dv~~~~I~vaD~~~~~~~~~~~~g~~~~~~~Vdadnv~~~l~aLl~~~DvVIN~s~ 92 (480)
T 2ph5_A 13 KNRFVILGFGCVGQALMPLIFEKFDIKPSQVTIIAAEGTKVDVAQQYGVSFKLQQITPQNYLEVIGSTLEENDFLIDVSI 92 (480)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHHBCCCGGGEEEEESSCCSCCHHHHHTCEEEECCCCTTTHHHHTGGGCCTTCEEEECCS
T ss_pred CCCEEEECcCHHHHHHHHHHHhCCCCceeEEEEeccchhhhhHHhhcCCceeEEeccchhHHHHHHHHhcCCCEEEECCc
Confidence 46899999999999999999987 44 68888776544332333467777777766532 34555588887441
Q ss_pred ecCCCCCCCChhhhHHHHHHHHhhcCCccEEEEEccc
Q 017914 130 SIPPLEGTGDPMLKHGELLRSTLMNGHLQWLGYLSST 166 (364)
Q Consensus 130 ~~~~~~~~~~~~~~~~~~l~~a~~~~~~~r~v~~Ss~ 166 (364)
. .....++++|.+.|+- |++++
T Consensus 93 ~------------~~~l~Im~acleaGv~---YlDTa 114 (480)
T 2ph5_A 93 G------------ISSLALIILCNQKGAL---YINAA 114 (480)
T ss_dssp S------------SCHHHHHHHHHHHTCE---EEESS
T ss_pred c------------ccCHHHHHHHHHcCCC---EEECC
Confidence 1 1245677888888753 55554
|
| >1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A* | Back alignment and structure |
|---|
Probab=96.66 E-value=0.0014 Score=59.14 Aligned_cols=39 Identities=15% Similarity=0.184 Sum_probs=35.3
Q ss_pred eEEEEcCChhhHHHHHHHHhCCCEEEEEEeCchhhhhhh
Q 017914 61 RMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELE 99 (364)
Q Consensus 61 ~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~ 99 (364)
+|.|+|+|.+|..++..|.+.|++|++++|+++..+.+.
T Consensus 17 kI~iIG~G~mG~~la~~L~~~G~~V~~~~r~~~~~~~l~ 55 (366)
T 1evy_A 17 KAVVFGSGAFGTALAMVLSKKCREVCVWHMNEEEVRLVN 55 (366)
T ss_dssp EEEEECCSHHHHHHHHHHTTTEEEEEEECSCHHHHHHHH
T ss_pred eEEEECCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHH
Confidence 899999999999999999999999999999887666554
|
| >3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha} | Back alignment and structure |
|---|
Probab=96.65 E-value=0.0022 Score=56.77 Aligned_cols=48 Identities=19% Similarity=0.321 Sum_probs=37.3
Q ss_pred CCCCCeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCce
Q 017914 56 WQSPNRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFD 104 (364)
Q Consensus 56 ~~~~~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~ 104 (364)
...+|+|.|+|+|.+|..++..|.+.|++|+++ ++++..+.+.+.+..
T Consensus 16 ~~~~~kI~IiGaGa~G~~~a~~L~~~G~~V~l~-~~~~~~~~i~~~g~~ 63 (318)
T 3hwr_A 16 YFQGMKVAIMGAGAVGCYYGGMLARAGHEVILI-ARPQHVQAIEATGLR 63 (318)
T ss_dssp ----CEEEEESCSHHHHHHHHHHHHTTCEEEEE-CCHHHHHHHHHHCEE
T ss_pred hccCCcEEEECcCHHHHHHHHHHHHCCCeEEEE-EcHhHHHHHHhCCeE
Confidence 355689999999999999999999999999999 777766666544443
|
| >2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A* | Back alignment and structure |
|---|
Probab=96.64 E-value=0.0037 Score=56.22 Aligned_cols=90 Identities=14% Similarity=0.099 Sum_probs=62.1
Q ss_pred CeEEEEcCChhhHHH-HHHH-HhCCCE-EEEEEeCch---hhhhhhhCCceEEEccCChhhH-Hhhc----cCceeeEEE
Q 017914 60 NRMLILGMGFVGRIF-AEKI-KNQGWV-VSGTCTNVM---KKKELEQSGFDVHLFNANETAL-MILT----TLKNYTHLL 128 (364)
Q Consensus 60 ~~vlVtGtG~iG~~l-~~~L-~~~g~~-V~~~~r~~~---~~~~l~~~~~~~~~~D~~~~~~-~~~~----~~d~v~~~~ 128 (364)
.+|||+|+|.+|... ++.+ ...|.+ |++++++++ +.+.+.+.+++.+ |..+.++ + +. ++|.|+.++
T Consensus 174 ~~VlV~GaG~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~~~~~lGa~~v--~~~~~~~~~-i~~~~gg~Dvvid~~ 250 (357)
T 2b5w_A 174 SSAFVLGNGSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDIIEELDATYV--DSRQTPVED-VPDVYEQMDFIYEAT 250 (357)
T ss_dssp CEEEEECCSHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHHHHHHTTCEEE--ETTTSCGGG-HHHHSCCEEEEEECS
T ss_pred CEEEEECCCHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHHHHHHcCCccc--CCCccCHHH-HHHhCCCCCEEEECC
Confidence 799999989999999 8888 778987 999999887 7777767787766 6665443 2 21 467777765
Q ss_pred EecCCCCCCCChhhhHHHHHHHHhhcCCccEEEEEcc
Q 017914 129 VSIPPLEGTGDPMLKHGELLRSTLMNGHLQWLGYLSS 165 (364)
Q Consensus 129 ~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~r~v~~Ss 165 (364)
+. . ......+..++..| ++|.++.
T Consensus 251 g~---------~--~~~~~~~~~l~~~G--~iv~~g~ 274 (357)
T 2b5w_A 251 GF---------P--KHAIQSVQALAPNG--VGALLGV 274 (357)
T ss_dssp CC---------H--HHHHHHHHHEEEEE--EEEECCC
T ss_pred CC---------h--HHHHHHHHHHhcCC--EEEEEeC
Confidence 31 1 12234455555544 7887654
|
| >2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A* | Back alignment and structure |
|---|
Probab=96.63 E-value=0.0022 Score=57.97 Aligned_cols=67 Identities=15% Similarity=0.161 Sum_probs=50.8
Q ss_pred CCeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCc---hhhhhhhhCCceEEEccCChhhH-Hhh----ccCceeeEEEE
Q 017914 59 PNRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNV---MKKKELEQSGFDVHLFNANETAL-MIL----TTLKNYTHLLV 129 (364)
Q Consensus 59 ~~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~---~~~~~l~~~~~~~~~~D~~~~~~-~~~----~~~d~v~~~~~ 129 (364)
+.+|||+|+|.+|..+++.+...|.+|+++++++ ++.+.+.+.++..+ | .+ ++ +.+ .++|.|+.+++
T Consensus 181 g~~VlV~GaG~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~~~ga~~v--~-~~-~~~~~~~~~~~~~d~vid~~g 255 (366)
T 2cdc_A 181 CRKVLVVGTGPIGVLFTLLFRTYGLEVWMANRREPTEVEQTVIEETKTNYY--N-SS-NGYDKLKDSVGKFDVIIDATG 255 (366)
T ss_dssp TCEEEEESCHHHHHHHHHHHHHHTCEEEEEESSCCCHHHHHHHHHHTCEEE--E-CT-TCSHHHHHHHCCEEEEEECCC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCccchHHHHHHHHhCCcee--c-hH-HHHHHHHHhCCCCCEEEECCC
Confidence 7899999989999999999999999999999988 66655555566655 5 54 32 121 35788777664
|
| >1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=96.62 E-value=0.0053 Score=55.71 Aligned_cols=95 Identities=14% Similarity=0.019 Sum_probs=63.6
Q ss_pred CCCCeEEEEcCChhhHHHHHHHHhCC-CEEEEEEeCchhhhhhhhCCceEEEccCC---hhhH-Hhh------ccCceee
Q 017914 57 QSPNRMLILGMGFVGRIFAEKIKNQG-WVVSGTCTNVMKKKELEQSGFDVHLFNAN---ETAL-MIL------TTLKNYT 125 (364)
Q Consensus 57 ~~~~~vlVtGtG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~l~~~~~~~~~~D~~---~~~~-~~~------~~~d~v~ 125 (364)
..+.+|||+|+|.+|...++.+...| .+|+++++++++.+.+.+.+...+ .|.. +.++ +.+ .++|.|+
T Consensus 194 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~lGa~~v-i~~~~~~~~~~~~~v~~~~~g~g~Dvvi 272 (380)
T 1vj0_A 194 FAGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEEIGADLT-LNRRETSVEERRKAIMDITHGRGADFIL 272 (380)
T ss_dssp CBTCEEEEECCSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHHHTTCSEE-EETTTSCHHHHHHHHHHHTTTSCEEEEE
T ss_pred CCCCEEEEECcCHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHHHcCCcEE-EeccccCcchHHHHHHHHhCCCCCcEEE
Confidence 34679999999999999999999999 699999999888777766666533 3444 3332 111 2578887
Q ss_pred EEEEecCCCCCCCChhhhHHHHHHHHhhcCCccEEEEEcc
Q 017914 126 HLLVSIPPLEGTGDPMLKHGELLRSTLMNGHLQWLGYLSS 165 (364)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~r~v~~Ss 165 (364)
.+++. . ......+..++..| ++|.++.
T Consensus 273 d~~g~-------~----~~~~~~~~~l~~~G--~iv~~G~ 299 (380)
T 1vj0_A 273 EATGD-------S----RALLEGSELLRRGG--FYSVAGV 299 (380)
T ss_dssp ECSSC-------T----THHHHHHHHEEEEE--EEEECCC
T ss_pred ECCCC-------H----HHHHHHHHHHhcCC--EEEEEec
Confidence 76642 0 12233445555544 7887654
|
| >2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis} | Back alignment and structure |
|---|
Probab=96.61 E-value=0.0019 Score=57.00 Aligned_cols=48 Identities=21% Similarity=0.365 Sum_probs=39.5
Q ss_pred CCCeEEEEcCChhhHHHHHHHHhC-----C-CEEEEEEeCchhhhhhhh-CCceEE
Q 017914 58 SPNRMLILGMGFVGRIFAEKIKNQ-----G-WVVSGTCTNVMKKKELEQ-SGFDVH 106 (364)
Q Consensus 58 ~~~~vlVtGtG~iG~~l~~~L~~~-----g-~~V~~~~r~~~~~~~l~~-~~~~~~ 106 (364)
++|+|.|+|.|.+|..++..|.+. | ++|++++| .++.+.+.+ .++.+.
T Consensus 7 ~~m~I~iiG~G~mG~~~a~~L~~~~~~~~g~~~V~~~~r-~~~~~~l~~~~g~~~~ 61 (317)
T 2qyt_A 7 QPIKIAVFGLGGVGGYYGAMLALRAAATDGLLEVSWIAR-GAHLEAIRAAGGLRVV 61 (317)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHHHHHTTSSEEEEEECC-HHHHHHHHHHTSEEEE
T ss_pred CCCEEEEECcCHHHHHHHHHHHhCccccCCCCCEEEEEc-HHHHHHHHhcCCeEEE
Confidence 347999999999999999999998 9 99999999 666666665 565543
|
| >3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A | Back alignment and structure |
|---|
Probab=96.60 E-value=0.0063 Score=55.14 Aligned_cols=66 Identities=11% Similarity=0.072 Sum_probs=49.5
Q ss_pred CCCCeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCChhhH--HhhccCcee
Q 017914 57 QSPNRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETAL--MILTTLKNY 124 (364)
Q Consensus 57 ~~~~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~--~~~~~~d~v 124 (364)
..+++|+|+|.|.+|+.+++.+.+.|++|++++..+...... ..-..+..|+.|.+. ...+.+|+|
T Consensus 10 ~~~~~IlIlG~G~lg~~la~aa~~lG~~viv~d~~~~~p~~~--~ad~~~~~~~~d~~~l~~~~~~~dvi 77 (377)
T 3orq_A 10 KFGATIGIIGGGQLGKMMAQSAQKMGYKVVVLDPSEDCPCRY--VAHEFIQAKYDDEKALNQLGQKCDVI 77 (377)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCTTCTTGG--GSSEEEECCTTCHHHHHHHHHHCSEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCChhhh--hCCEEEECCCCCHHHHHHHHHhCCcc
Confidence 456899999999999999999999999999998765432211 122567788888764 445667765
|
| >3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida} | Back alignment and structure |
|---|
Probab=96.57 E-value=0.004 Score=53.55 Aligned_cols=69 Identities=13% Similarity=0.027 Sum_probs=47.7
Q ss_pred CCCCeEEEEcCChhhHHHHHHHHhCCC-EEEEEEeCchhhhhhhhC--CceEEEccCChhhHHhhccCceeeEEE
Q 017914 57 QSPNRMLILGMGFVGRIFAEKIKNQGW-VVSGTCTNVMKKKELEQS--GFDVHLFNANETALMILTTLKNYTHLL 128 (364)
Q Consensus 57 ~~~~~vlVtGtG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~l~~~--~~~~~~~D~~~~~~~~~~~~d~v~~~~ 128 (364)
..+++++|+|+|.+|+.++..|.+.|. +|++.+|+.++...+.+. ...+...++.+.. . .++|.|+++.
T Consensus 118 l~~k~~lvlGaGg~~~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~~~~~l~--~-~~~DivInaT 189 (272)
T 3pwz_A 118 LRNRRVLLLGAGGAVRGALLPFLQAGPSELVIANRDMAKALALRNELDHSRLRISRYEALE--G-QSFDIVVNAT 189 (272)
T ss_dssp CTTSEEEEECCSHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHCCTTEEEECSGGGT--T-CCCSEEEECS
T ss_pred ccCCEEEEECccHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhccCCeeEeeHHHhc--c-cCCCEEEECC
Confidence 456899999999999999999999995 999999998877665321 1011112222211 1 5677777765
|
| >1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A* | Back alignment and structure |
|---|
Probab=96.57 E-value=0.004 Score=56.55 Aligned_cols=49 Identities=29% Similarity=0.383 Sum_probs=41.1
Q ss_pred CCCeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEE
Q 017914 58 SPNRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVH 106 (364)
Q Consensus 58 ~~~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~ 106 (364)
.+++|+|+|+|.+|..+++.+...|.+|++.+|++.+.+.+.+.+..++
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~Ga~V~~~d~~~~~~~~~~~~Ga~~~ 219 (384)
T 1l7d_A 171 PPARVLVFGVGVAGLQAIATAKRLGAVVMATDVRAATKEQVESLGGKFI 219 (384)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCSTTHHHHHHTTCEEC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeEE
Confidence 5689999999999999999999999999999998877665555565544
|
| >2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A | Back alignment and structure |
|---|
Probab=96.57 E-value=0.0026 Score=55.01 Aligned_cols=67 Identities=18% Similarity=0.179 Sum_probs=49.7
Q ss_pred CCCeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhC-CceEEEccCChhhHHhhccCceeeEEEE
Q 017914 58 SPNRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQS-GFDVHLFNANETALMILTTLKNYTHLLV 129 (364)
Q Consensus 58 ~~~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~-~~~~~~~D~~~~~~~~~~~~d~v~~~~~ 129 (364)
.+++|+|+|+|.+|+.++..|.+.|++|++.+|+.++...+.+. ++.. .+ +.. +.+.++|.|+.+..
T Consensus 128 ~~~~v~iiGaG~~g~aia~~L~~~g~~V~v~~r~~~~~~~l~~~~g~~~--~~--~~~-~~~~~aDiVi~atp 195 (275)
T 2hk9_A 128 KEKSILVLGAGGASRAVIYALVKEGAKVFLWNRTKEKAIKLAQKFPLEV--VN--SPE-EVIDKVQVIVNTTS 195 (275)
T ss_dssp GGSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSHHHHHHHTTTSCEEE--CS--CGG-GTGGGCSEEEECSS
T ss_pred CCCEEEEECchHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHcCCee--eh--hHH-hhhcCCCEEEEeCC
Confidence 46899999999999999999999999999999998776655422 3221 11 111 45678898888764
|
| >2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A* | Back alignment and structure |
|---|
Probab=96.56 E-value=0.0035 Score=56.07 Aligned_cols=93 Identities=18% Similarity=0.093 Sum_probs=61.6
Q ss_pred CCCeEEEEcCChhhHHHHHHHHhCCC-EEEEEEeCchhhhhhhhCCceEEEccCChhhH-Hhh-----ccCceeeEEEEe
Q 017914 58 SPNRMLILGMGFVGRIFAEKIKNQGW-VVSGTCTNVMKKKELEQSGFDVHLFNANETAL-MIL-----TTLKNYTHLLVS 130 (364)
Q Consensus 58 ~~~~vlVtGtG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~-~~~-----~~~d~v~~~~~~ 130 (364)
.+.+|||+|+|.+|..+++.+...|. +|+++++++++.+.+.+. ... ..|..+.++ +.+ .++|.|+.+++.
T Consensus 164 ~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~l-a~~-v~~~~~~~~~~~~~~~~~~g~D~vid~~g~ 241 (343)
T 2dq4_A 164 SGKSVLITGAGPIGLMAAMVVRASGAGPILVSDPNPYRLAFARPY-ADR-LVNPLEEDLLEVVRRVTGSGVEVLLEFSGN 241 (343)
T ss_dssp TTSCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHGGGTTT-CSE-EECTTTSCHHHHHHHHHSSCEEEEEECSCC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh-HHh-ccCcCccCHHHHHHHhcCCCCCEEEECCCC
Confidence 56799999989999999999999999 999999988776665443 322 245554333 222 257888776642
Q ss_pred cCCCCCCCChhhhHHHHHHHHhhcCCccEEEEEcc
Q 017914 131 IPPLEGTGDPMLKHGELLRSTLMNGHLQWLGYLSS 165 (364)
Q Consensus 131 ~~~~~~~~~~~~~~~~~l~~a~~~~~~~r~v~~Ss 165 (364)
.......+..++..| ++|.++.
T Consensus 242 -----------~~~~~~~~~~l~~~G--~iv~~g~ 263 (343)
T 2dq4_A 242 -----------EAAIHQGLMALIPGG--EARILGI 263 (343)
T ss_dssp -----------HHHHHHHHHHEEEEE--EEEECCC
T ss_pred -----------HHHHHHHHHHHhcCC--EEEEEec
Confidence 112334455555544 7887654
|
| >3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis} | Back alignment and structure |
|---|
Probab=96.56 E-value=0.0017 Score=57.71 Aligned_cols=73 Identities=15% Similarity=0.153 Sum_probs=49.0
Q ss_pred CCCCCeEEEEc-CChhhHHHHHHHHhCC--CEEEEEEeCchhhhh----hhhCCceEEEccCCh-hhH-HhhccCceeeE
Q 017914 56 WQSPNRMLILG-MGFVGRIFAEKIKNQG--WVVSGTCTNVMKKKE----LEQSGFDVHLFNANE-TAL-MILTTLKNYTH 126 (364)
Q Consensus 56 ~~~~~~vlVtG-tG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~----l~~~~~~~~~~D~~~-~~~-~~~~~~d~v~~ 126 (364)
.+.++||.|+| +|+||+.++..|+..| .+|++++++.++... +...... ..++.- .+. .+++++|+|+.
T Consensus 5 ~~~~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~~~k~~g~a~DL~~~~~~--~~~i~~t~d~~~al~dADvVvi 82 (343)
T 3fi9_A 5 YLTEEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPFAVGLEGVAEEIRHCGFE--GLNLTFTSDIKEALTDAKYIVS 82 (343)
T ss_dssp CSCSSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSCHHHHHHHHHHHHHHCCT--TCCCEEESCHHHHHTTEEEEEE
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCCchhHHHHHHhhhhCcCC--CCceEEcCCHHHHhCCCCEEEE
Confidence 35568999999 5999999999999988 589999997664432 2221100 011110 112 57889999999
Q ss_pred EEEe
Q 017914 127 LLVS 130 (364)
Q Consensus 127 ~~~~ 130 (364)
+++.
T Consensus 83 taG~ 86 (343)
T 3fi9_A 83 SGGA 86 (343)
T ss_dssp CCC-
T ss_pred ccCC
Confidence 9865
|
| >1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=96.55 E-value=0.0097 Score=53.80 Aligned_cols=96 Identities=13% Similarity=0.062 Sum_probs=63.5
Q ss_pred CCCCeEEEEcCChhhHHHHHHHHhCCC-EEEEEEeCchhhhhhhhCCceEEEccCCh--hhH-Hhh-----ccCceeeEE
Q 017914 57 QSPNRMLILGMGFVGRIFAEKIKNQGW-VVSGTCTNVMKKKELEQSGFDVHLFNANE--TAL-MIL-----TTLKNYTHL 127 (364)
Q Consensus 57 ~~~~~vlVtGtG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~l~~~~~~~~~~D~~~--~~~-~~~-----~~~d~v~~~ 127 (364)
..+.+|||+|+|.+|...++.+...|. +|+++++++++.+.+.+.++..+ .|..+ .++ +.+ .++|.|+.+
T Consensus 191 ~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~v-i~~~~~~~~~~~~~~~~~~~g~D~vid~ 269 (374)
T 1cdo_A 191 EPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVFGATDF-VNPNDHSEPISQVLSKMTNGGVDFSLEC 269 (374)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCCEE-ECGGGCSSCHHHHHHHHHTSCBSEEEEC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhCCceE-EeccccchhHHHHHHHHhCCCCCEEEEC
Confidence 346799999999999999999999998 89999999888777666666533 35443 122 111 257888876
Q ss_pred EEecCCCCCCCChhhhHHHHHHHHhhcCCccEEEEEcc
Q 017914 128 LVSIPPLEGTGDPMLKHGELLRSTLMNGHLQWLGYLSS 165 (364)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~r~v~~Ss 165 (364)
++. .......+..++.. ..++|.++.
T Consensus 270 ~g~-----------~~~~~~~~~~l~~~-~G~iv~~G~ 295 (374)
T 1cdo_A 270 VGN-----------VGVMRNALESCLKG-WGVSVLVGW 295 (374)
T ss_dssp SCC-----------HHHHHHHHHTBCTT-TCEEEECSC
T ss_pred CCC-----------HHHHHHHHHHhhcC-CcEEEEEcC
Confidence 642 11223444555544 137887654
|
| >3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B* | Back alignment and structure |
|---|
Probab=96.54 E-value=0.0033 Score=54.32 Aligned_cols=43 Identities=19% Similarity=0.204 Sum_probs=37.4
Q ss_pred CCCCeEEEEcCChhhHHHHHHHHhCCC-EEEEEEeCchhhhhhh
Q 017914 57 QSPNRMLILGMGFVGRIFAEKIKNQGW-VVSGTCTNVMKKKELE 99 (364)
Q Consensus 57 ~~~~~vlVtGtG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~l~ 99 (364)
..+++|+|+|+|.+|+.++..|.+.|. +|++.+|+.++...+.
T Consensus 124 l~~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la 167 (281)
T 3o8q_A 124 LKGATILLIGAGGAARGVLKPLLDQQPASITVTNRTFAKAEQLA 167 (281)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHTTCCSEEEEEESSHHHHHHHH
T ss_pred ccCCEEEEECchHHHHHHHHHHHhcCCCeEEEEECCHHHHHHHH
Confidence 457899999999999999999999996 9999999988766543
|
| >2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ... | Back alignment and structure |
|---|
Probab=96.54 E-value=0.01 Score=53.68 Aligned_cols=96 Identities=14% Similarity=0.048 Sum_probs=63.1
Q ss_pred CCCCeEEEEcCChhhHHHHHHHHhCCC-EEEEEEeCchhhhhhhhCCceEEEccCCh--hhH-H---hh--ccCceeeEE
Q 017914 57 QSPNRMLILGMGFVGRIFAEKIKNQGW-VVSGTCTNVMKKKELEQSGFDVHLFNANE--TAL-M---IL--TTLKNYTHL 127 (364)
Q Consensus 57 ~~~~~vlVtGtG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~l~~~~~~~~~~D~~~--~~~-~---~~--~~~d~v~~~ 127 (364)
..+.+|||+|+|.+|...++.+...|. +|+++++++++.+.+.+.++..+ .|..+ .++ + .+ .++|.|+.+
T Consensus 190 ~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~v-i~~~~~~~~~~~~~~~~~~~g~D~vid~ 268 (374)
T 2jhf_A 190 TQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATEC-VNPQDYKKPIQEVLTEMSNGGVDFSFEV 268 (374)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEE-ECGGGCSSCHHHHHHHHTTSCBSEEEEC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCceE-ecccccchhHHHHHHHHhCCCCcEEEEC
Confidence 346799999999999999999999998 89999999888777666666533 34443 122 1 11 257888877
Q ss_pred EEecCCCCCCCChhhhHHHHHHHHhhcCCccEEEEEcc
Q 017914 128 LVSIPPLEGTGDPMLKHGELLRSTLMNGHLQWLGYLSS 165 (364)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~r~v~~Ss 165 (364)
++. .......+..++.. ..++|.++.
T Consensus 269 ~g~-----------~~~~~~~~~~l~~~-~G~iv~~G~ 294 (374)
T 2jhf_A 269 IGR-----------LDTMVTALSCCQEA-YGVSVIVGV 294 (374)
T ss_dssp SCC-----------HHHHHHHHHHBCTT-TCEEEECSC
T ss_pred CCC-----------HHHHHHHHHHhhcC-CcEEEEecc
Confidence 642 11223444555544 137887653
|
| >2yjz_A Metalloreductase steap4; oxidoreductase, metabolic syndrome; HET: NAP; 2.20A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=95.54 E-value=0.00039 Score=57.11 Aligned_cols=66 Identities=17% Similarity=0.116 Sum_probs=46.3
Q ss_pred CCCCeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCChhhHHhhccCceeeEEEE
Q 017914 57 QSPNRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETALMILTTLKNYTHLLV 129 (364)
Q Consensus 57 ~~~~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~~~~~~~d~v~~~~~ 129 (364)
.++|+|.|+|+|.+|+.+++.|.+.|++|++.+|+++ ...+...++.. .+.. +.+..+|.|+.+.-
T Consensus 17 ~~~~~I~iIG~G~mG~~la~~L~~~G~~V~~~~r~~~-~~~~~~~g~~~-----~~~~-~~~~~aDvVilav~ 82 (201)
T 2yjz_A 17 EKQGVVCIFGTGDFGKSLGLKMLQCGYSVVFGSRNPQ-VSSLLPRGAEV-----LCYS-EAASRSDVIVLAVH 82 (201)
Confidence 3457899999999999999999999999999999865 33332222221 1111 45567788777663
|
| >2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans} | Back alignment and structure |
|---|
Probab=96.52 E-value=0.0018 Score=60.65 Aligned_cols=43 Identities=21% Similarity=0.278 Sum_probs=38.2
Q ss_pred CCCeEEEEcCChhhHHHHHHHHhC--CCEEEEEEeCchhhhhhhh
Q 017914 58 SPNRMLILGMGFVGRIFAEKIKNQ--GWVVSGTCTNVMKKKELEQ 100 (364)
Q Consensus 58 ~~~~vlVtGtG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~l~~ 100 (364)
++|+|.|+|.|++|..++..|.+. |++|++++|++++.+.+.+
T Consensus 8 ~~mkI~VIG~G~vG~~~A~~La~~g~g~~V~~~D~~~~~v~~l~~ 52 (481)
T 2o3j_A 8 KVSKVVCVGAGYVGGPTCAMIAHKCPHITVTVVDMNTAKIAEWNS 52 (481)
T ss_dssp CCCEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCHHHHHHHTS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCHHHHHHHHC
Confidence 457999999999999999999998 7999999999888777654
|
| >1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A* | Back alignment and structure |
|---|
Probab=96.52 E-value=0.0097 Score=53.85 Aligned_cols=96 Identities=13% Similarity=0.032 Sum_probs=63.2
Q ss_pred CCCCeEEEEcCChhhHHHHHHHHhCCC-EEEEEEeCchhhhhhhhCCceEEEccCCh--hhH-Hhh-----ccCceeeEE
Q 017914 57 QSPNRMLILGMGFVGRIFAEKIKNQGW-VVSGTCTNVMKKKELEQSGFDVHLFNANE--TAL-MIL-----TTLKNYTHL 127 (364)
Q Consensus 57 ~~~~~vlVtGtG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~l~~~~~~~~~~D~~~--~~~-~~~-----~~~d~v~~~ 127 (364)
..+.+|||+|+|.+|...++.+...|. +|+++++++++.+.+.+.++..+ .|..+ .++ +.+ .++|.|+.+
T Consensus 194 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~v-i~~~~~~~~~~~~v~~~~~~g~Dvvid~ 272 (376)
T 1e3i_A 194 TPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKALGATDC-LNPRELDKPVQDVITELTAGGVDYSLDC 272 (376)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEE-ECGGGCSSCHHHHHHHHHTSCBSEEEES
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCcEE-EccccccchHHHHHHHHhCCCccEEEEC
Confidence 346799999999999999999999998 89999999888777666666533 34443 122 111 257888877
Q ss_pred EEecCCCCCCCChhhhHHHHHHHHhhcCCccEEEEEcc
Q 017914 128 LVSIPPLEGTGDPMLKHGELLRSTLMNGHLQWLGYLSS 165 (364)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~r~v~~Ss 165 (364)
++. .......+..++.. ..++|.++.
T Consensus 273 ~G~-----------~~~~~~~~~~l~~~-~G~iv~~G~ 298 (376)
T 1e3i_A 273 AGT-----------AQTLKAAVDCTVLG-WGSCTVVGA 298 (376)
T ss_dssp SCC-----------HHHHHHHHHTBCTT-TCEEEECCC
T ss_pred CCC-----------HHHHHHHHHHhhcC-CCEEEEECC
Confidence 642 11223344455544 137887654
|
| >1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6 | Back alignment and structure |
|---|
Probab=96.51 E-value=0.0031 Score=56.26 Aligned_cols=65 Identities=18% Similarity=0.211 Sum_probs=48.4
Q ss_pred CCCeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCchh-hhhhhhCCceEEEccCChhhHHhhccCceeeEEE
Q 017914 58 SPNRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMK-KKELEQSGFDVHLFNANETALMILTTLKNYTHLL 128 (364)
Q Consensus 58 ~~~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~~-~~~l~~~~~~~~~~D~~~~~~~~~~~~d~v~~~~ 128 (364)
.+|+|.|+|.|.+|..++..|.+.|++|++.+|+.+. .......++... | .+ ..+..+|.|+.++
T Consensus 15 ~~~~I~IIG~G~mG~alA~~L~~~G~~V~~~~~~~~~~~~~a~~~G~~~~--~---~~-e~~~~aDvVilav 80 (338)
T 1np3_A 15 QGKKVAIIGYGSQGHAHACNLKDSGVDVTVGLRSGSATVAKAEAHGLKVA--D---VK-TAVAAADVVMILT 80 (338)
T ss_dssp HTSCEEEECCSHHHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHTTCEEE--C---HH-HHHHTCSEEEECS
T ss_pred cCCEEEEECchHHHHHHHHHHHHCcCEEEEEECChHHHHHHHHHCCCEEc--c---HH-HHHhcCCEEEEeC
Confidence 3578999999999999999999999999999998655 333334565432 2 22 4567888888765
|
| >4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A* | Back alignment and structure |
|---|
Probab=96.50 E-value=0.0032 Score=54.63 Aligned_cols=40 Identities=20% Similarity=0.254 Sum_probs=35.7
Q ss_pred CCeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCchhhhhh
Q 017914 59 PNRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMKKKEL 98 (364)
Q Consensus 59 ~~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l 98 (364)
+++|.|+|+|.+|+.++..|.+.|++|++.+|+++..+..
T Consensus 4 ~~kV~VIGaG~mG~~iA~~la~~G~~V~l~d~~~~~~~~~ 43 (283)
T 4e12_A 4 ITNVTVLGTGVLGSQIAFQTAFHGFAVTAYDINTDALDAA 43 (283)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEeCCHHHHHHH
Confidence 4799999999999999999999999999999988765443
|
| >3pwk_A Aspartate-semialdehyde dehydrogenase; NADP binding, oxidoreductase-oxidoreductase I complex; HET: 25A L14; 1.50A {Streptococcus pneumoniae} PDB: 2gyy_A* 2gz2_A* 2gz3_A* 2gz1_A* 3pws_A* 3pyl_A 3pyx_A* 3pzb_A* 3q11_A* 3q1l_A | Back alignment and structure |
|---|
Probab=96.49 E-value=0.0078 Score=53.91 Aligned_cols=92 Identities=11% Similarity=0.050 Sum_probs=50.5
Q ss_pred CCeEEEEc-CChhhHHHHHHHHhCCC---EEEEEEeCchhhhhhhhCCceEEEccCChhhHHhhccCceeeEEEEecCCC
Q 017914 59 PNRMLILG-MGFVGRIFAEKIKNQGW---VVSGTCTNVMKKKELEQSGFDVHLFNANETALMILTTLKNYTHLLVSIPPL 134 (364)
Q Consensus 59 ~~~vlVtG-tG~iG~~l~~~L~~~g~---~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~~~~~~~d~v~~~~~~~~~~ 134 (364)
+++|.|+| ||++|+.|++.|.+++| ++..+.-....-..+.-.+.....-++.. ..+.++|+|+.+...
T Consensus 2 ~~kVaIvGATG~vG~eLlrlL~~~~~p~~el~~~as~~saG~~~~~~~~~~~~~~~~~---~~~~~~Dvvf~a~~~---- 74 (366)
T 3pwk_A 2 GYTVAVVGATGAVGAQMIKMLEESTLPIDKIRYLASARSAGKSLKFKDQDITIEETTE---TAFEGVDIALFSAGS---- 74 (366)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHTCCCCEEEEEEEECTTTTTCEEEETTEEEEEEECCT---TTTTTCSEEEECSCH----
T ss_pred CcEEEEECCCChHHHHHHHHHhcCCCCcEEEEEEEccccCCCcceecCCCceEeeCCH---HHhcCCCEEEECCCh----
Confidence 57999999 99999999999999866 34444422111111111111211112211 235678888876531
Q ss_pred CCCCChhhhHHHHHHHHhhcCCccEEEEEccc
Q 017914 135 EGTGDPMLKHGELLRSTLMNGHLQWLGYLSST 166 (364)
Q Consensus 135 ~~~~~~~~~~~~~l~~a~~~~~~~r~v~~Ss~ 166 (364)
.........+.+.|+ ++|=+|+.
T Consensus 75 --------~~s~~~a~~~~~~G~-~vIDlSa~ 97 (366)
T 3pwk_A 75 --------STSAKYAPYAVKAGV-VVVDNTSY 97 (366)
T ss_dssp --------HHHHHHHHHHHHTTC-EEEECSST
T ss_pred --------HhHHHHHHHHHHCCC-EEEEcCCc
Confidence 122333444445666 47777774
|
| >3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A* | Back alignment and structure |
|---|
Probab=96.48 E-value=0.0043 Score=57.42 Aligned_cols=65 Identities=15% Similarity=0.143 Sum_probs=48.3
Q ss_pred CCCCeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCChhhHHhhccCceeeEE
Q 017914 57 QSPNRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETALMILTTLKNYTHL 127 (364)
Q Consensus 57 ~~~~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~~~~~~~d~v~~~ 127 (364)
..+++|+|+|.|.||+.+++.|...|.+|++.++++.+.......++ |+.+.+ ..+..+|.|+..
T Consensus 263 L~GKtVvVtGaGgIG~aiA~~Laa~GA~Viv~D~~~~~a~~Aa~~g~-----dv~~le-e~~~~aDvVi~a 327 (488)
T 3ond_A 263 IAGKVAVVAGYGDVGKGCAAALKQAGARVIVTEIDPICALQATMEGL-----QVLTLE-DVVSEADIFVTT 327 (488)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTC-----EECCGG-GTTTTCSEEEEC
T ss_pred ccCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHhCC-----ccCCHH-HHHHhcCEEEeC
Confidence 56789999998899999999999999999999998766544433443 233322 455677877743
|
| >1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A* | Back alignment and structure |
|---|
Probab=96.48 E-value=0.015 Score=49.10 Aligned_cols=152 Identities=14% Similarity=0.031 Sum_probs=85.0
Q ss_pred CeEEEEc-CChhhHHHHHHHHhC-CCEEEEEEeCchhhhhhhhCCceEEEccCChhhH--Hhh-----ccCceeeEEEEe
Q 017914 60 NRMLILG-MGFVGRIFAEKIKNQ-GWVVSGTCTNVMKKKELEQSGFDVHLFNANETAL--MIL-----TTLKNYTHLLVS 130 (364)
Q Consensus 60 ~~vlVtG-tG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~--~~~-----~~~d~v~~~~~~ 130 (364)
|+|.|+| +|.+|+.+++.+.+. |+++++.....++.+.+...+.+ +..|++.++. ..+ .+++.|+ +.
T Consensus 1 mkV~V~Ga~G~mG~~i~~~~~~~~~~elva~~d~~~dl~~~~~~~~D-vvIDfT~p~a~~~~~~~a~~~g~~~Vi---gT 76 (245)
T 1p9l_A 1 MRVGVLGAKGKVGTTMVRAVAAADDLTLSAELDAGDPLSLLTDGNTE-VVIDFTHPDVVMGNLEFLIDNGIHAVV---GT 76 (245)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHCTTCEEEEEECTTCCTHHHHHTTCC-EEEECSCTTTHHHHHHHHHHTTCEEEE---CC
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEccCCCHHHHhccCCc-EEEEccChHHHHHHHHHHHHcCCCEEE---cC
Confidence 5899999 899999999999876 89998776654444333223444 5678887663 222 2334333 22
Q ss_pred cCCCCCCCChhhhHHHHHHHHhhcC-CccEEEEEccceeecC------------CCCccccCCCCC-CCCChhHHHHHHH
Q 017914 131 IPPLEGTGDPMLKHGELLRSTLMNG-HLQWLGYLSSTGVYGH------------SGGAWVDEDYPA-NPTTELGRLRLSA 196 (364)
Q Consensus 131 ~~~~~~~~~~~~~~~~~l~~a~~~~-~~~r~v~~Ss~~vy~~------------~~~~~~~E~~~~-~~~~~Y~~sK~~~ 196 (364)
.+ +.+ +....+.+++++. ++ .+++.+..++-.+ -.+.-+-|.... +...|-|-.+..+
T Consensus 77 TG----~~~---e~~~~l~~aa~~~~~~-~vv~a~N~siGv~ll~~l~~~aa~~~~dieIiE~HH~~K~DaPSGTA~~la 148 (245)
T 1p9l_A 77 TG----FTA---ERFQQVESWLVAKPNT-SVLIAPNFAIGAVLSMHFAKQAARFFDSAEVIELHHPHKADAPSGTAARTA 148 (245)
T ss_dssp CC----CCH---HHHHHHHHHHHTSTTC-EEEECSCCCHHHHHHHHHHHHHGGGCSEEEEEEEECTTCCSSSCHHHHHHH
T ss_pred CC----CCH---HHHHHHHHHHHhCCCC-CEEEECCccHHHHHHHHHHHHHHhhcCCEEEEECcccCCCCCCCHHHHHHH
Confidence 21 121 2234556666644 44 4666655332000 011123343322 2233457777777
Q ss_pred HHHHHHhhh-------------------hcCCcEEEEEecceecCC
Q 017914 197 EKGWLNLGR-------------------DLGISAQVFRLGGIYGPG 223 (364)
Q Consensus 197 E~~~~~~~~-------------------~~~~~~~ilRp~~v~g~~ 223 (364)
|.+...... ..++.+..+|.|.+.|..
T Consensus 149 e~i~~~~~~~~~~~~~~~~~~~g~r~~~~~~i~i~s~R~g~ivg~h 194 (245)
T 1p9l_A 149 KLIAEARKGLPPNPDATSTSLPGARGADVDGIPVHAVRLAGLVAHQ 194 (245)
T ss_dssp HHHHHHTTTSCCCCCCCCSCCTTTTCEEETTEEEEEEECTTCCEEE
T ss_pred HHHHHhhcccccccccccccccCCCCCCCCcceEEEEECCCCCeEE
Confidence 776543210 125778899999888764
|
| >2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus} | Back alignment and structure |
|---|
Probab=96.47 E-value=0.0034 Score=56.16 Aligned_cols=94 Identities=13% Similarity=0.052 Sum_probs=63.0
Q ss_pred CCCeEEEEcCChhhHHHHHHHHhC--CCEEEEEEeCchhhhhhhhCCceEEEccCCh-hhH-Hhhc---cCceeeEEEEe
Q 017914 58 SPNRMLILGMGFVGRIFAEKIKNQ--GWVVSGTCTNVMKKKELEQSGFDVHLFNANE-TAL-MILT---TLKNYTHLLVS 130 (364)
Q Consensus 58 ~~~~vlVtGtG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~-~~~-~~~~---~~d~v~~~~~~ 130 (364)
.+.+|||+|+|.+|...++.+... |.+|+++++++++.+.+.+.+...+ .|..+ .++ ..+. ++|.|+.+++.
T Consensus 170 ~g~~VlV~GaG~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~~~lGa~~v-i~~~~~~~~~~~~~~g~g~D~vid~~g~ 248 (344)
T 2h6e_A 170 AEPVVIVNGIGGLAVYTIQILKALMKNITIVGISRSKKHRDFALELGADYV-SEMKDAESLINKLTDGLGASIAIDLVGT 248 (344)
T ss_dssp SSCEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHTCSEE-ECHHHHHHHHHHHHTTCCEEEEEESSCC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHHHHhCCCEE-eccccchHHHHHhhcCCCccEEEECCCC
Confidence 568999999899999999999988 9999999998887766655555432 34444 333 2232 57888877642
Q ss_pred cCCCCCCCChhhhHHHHHHHHhhcCCccEEEEEcc
Q 017914 131 IPPLEGTGDPMLKHGELLRSTLMNGHLQWLGYLSS 165 (364)
Q Consensus 131 ~~~~~~~~~~~~~~~~~l~~a~~~~~~~r~v~~Ss 165 (364)
.......+..++..| ++|.++.
T Consensus 249 -----------~~~~~~~~~~l~~~G--~iv~~g~ 270 (344)
T 2h6e_A 249 -----------EETTYNLGKLLAQEG--AIILVGM 270 (344)
T ss_dssp -----------HHHHHHHHHHEEEEE--EEEECCC
T ss_pred -----------hHHHHHHHHHhhcCC--EEEEeCC
Confidence 112334455555544 7877654
|
| >2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.47 E-value=0.0099 Score=52.73 Aligned_cols=66 Identities=18% Similarity=0.155 Sum_probs=49.6
Q ss_pred CCCCeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCChhhHHhhccCceeeEEEE
Q 017914 57 QSPNRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETALMILTTLKNYTHLLV 129 (364)
Q Consensus 57 ~~~~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~~~~~~~d~v~~~~~ 129 (364)
..+++|.|+|.|.||+.+++.|...|++|++.+|+.... .....++.. . +.+ +.+..+|.|+.+..
T Consensus 163 l~g~tvgIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~~-~~~~~g~~~--~---~l~-ell~~aDvV~l~~P 228 (335)
T 2g76_A 163 LNGKTLGILGLGRIGREVATRMQSFGMKTIGYDPIISPE-VSASFGVQQ--L---PLE-EIWPLCDFITVHTP 228 (335)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSSCHH-HHHHTTCEE--C---CHH-HHGGGCSEEEECCC
T ss_pred CCcCEEEEEeECHHHHHHHHHHHHCCCEEEEECCCcchh-hhhhcCcee--C---CHH-HHHhcCCEEEEecC
Confidence 567899999999999999999999999999999976542 222345442 1 222 56788998887654
|
| >4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A | Back alignment and structure |
|---|
Probab=96.46 E-value=0.0057 Score=56.25 Aligned_cols=67 Identities=12% Similarity=0.070 Sum_probs=50.0
Q ss_pred CCCCeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCChhhH--HhhccCceee
Q 017914 57 QSPNRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETAL--MILTTLKNYT 125 (364)
Q Consensus 57 ~~~~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~--~~~~~~d~v~ 125 (364)
..+++|+|+|.|.+|+.+++.+.+.|++|++++..+...... ..-..+..|+.|.+. ...+.+|+|+
T Consensus 33 ~~~~~IlIlG~G~lg~~~~~aa~~lG~~v~v~d~~~~~p~~~--~ad~~~~~~~~d~~~l~~~a~~~D~V~ 101 (419)
T 4e4t_A 33 LPGAWLGMVGGGQLGRMFCFAAQSMGYRVAVLDPDPASPAGA--VADRHLRAAYDDEAALAELAGLCEAVS 101 (419)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCTTCHHHH--HSSEEECCCTTCHHHHHHHHHHCSEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCCcCchhh--hCCEEEECCcCCHHHHHHHHhcCCEEE
Confidence 456899999999999999999999999999998654432211 122466688888663 4556788877
|
| >4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A* | Back alignment and structure |
|---|
Probab=96.45 E-value=0.0057 Score=55.30 Aligned_cols=95 Identities=13% Similarity=0.095 Sum_probs=62.6
Q ss_pred CCCCeEEEEcCChhhHHHHHHHHhCCC-EEEEEEeCchhhhhhhhCCceEEEccCChhhH-Hhh--------ccCceeeE
Q 017914 57 QSPNRMLILGMGFVGRIFAEKIKNQGW-VVSGTCTNVMKKKELEQSGFDVHLFNANETAL-MIL--------TTLKNYTH 126 (364)
Q Consensus 57 ~~~~~vlVtGtG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~-~~~--------~~~d~v~~ 126 (364)
..+.+|||+|+|.+|...++.+...|. +|+++++++++.+...+.++..+ .|..+.++ +.+ .++|.|+.
T Consensus 181 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~v-i~~~~~~~~~~i~~~~~~~~gg~Dvvid 259 (370)
T 4ej6_A 181 KAGSTVAILGGGVIGLLTVQLARLAGATTVILSTRQATKRRLAEEVGATAT-VDPSAGDVVEAIAGPVGLVPGGVDVVIE 259 (370)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHTCSEE-ECTTSSCHHHHHHSTTSSSTTCEEEEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCCEE-ECCCCcCHHHHHHhhhhccCCCCCEEEE
Confidence 456799999999999999999999998 89999998887766655565533 35444333 222 14677777
Q ss_pred EEEecCCCCCCCChhhhHHHHHHHHhhcCCccEEEEEcc
Q 017914 127 LLVSIPPLEGTGDPMLKHGELLRSTLMNGHLQWLGYLSS 165 (364)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~r~v~~Ss 165 (364)
+++. .......+..++..| ++|.++.
T Consensus 260 ~~G~-----------~~~~~~~~~~l~~~G--~vv~~G~ 285 (370)
T 4ej6_A 260 CAGV-----------AETVKQSTRLAKAGG--TVVILGV 285 (370)
T ss_dssp CSCC-----------HHHHHHHHHHEEEEE--EEEECSC
T ss_pred CCCC-----------HHHHHHHHHHhccCC--EEEEEec
Confidence 6531 112334455555544 7877653
|
| >1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A* | Back alignment and structure |
|---|
Probab=96.45 E-value=0.0034 Score=55.03 Aligned_cols=39 Identities=15% Similarity=0.107 Sum_probs=35.0
Q ss_pred CCCeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCchhhh
Q 017914 58 SPNRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMKKK 96 (364)
Q Consensus 58 ~~~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~~~~ 96 (364)
.+++|.|+|+|.+|..++..|.+.|++|++++|+++..+
T Consensus 14 ~~~~I~VIG~G~mG~~iA~~la~~G~~V~~~d~~~~~~~ 52 (302)
T 1f0y_A 14 IVKHVTVIGGGLMGAGIAQVAAATGHTVVLVDQTEDILA 52 (302)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHH
T ss_pred cCCEEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHH
Confidence 357899999999999999999999999999999876654
|
| >1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=96.45 E-value=0.0052 Score=55.54 Aligned_cols=72 Identities=15% Similarity=0.162 Sum_probs=52.9
Q ss_pred CCCCeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCChhhH--HhhccCceeeEEEE
Q 017914 57 QSPNRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETAL--MILTTLKNYTHLLV 129 (364)
Q Consensus 57 ~~~~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~--~~~~~~d~v~~~~~ 129 (364)
..+.+|||+|+|.+|...++.+...|.+|+++++++++.+.+.+.+...+ .|..+.++ ....++|.|+.+++
T Consensus 193 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~Vi~~~~~~~~~~~a~~lGa~~v-i~~~~~~~~~~~~~g~Dvvid~~g 266 (369)
T 1uuf_A 193 GPGKKVGVVGIGGLGHMGIKLAHAMGAHVVAFTTSEAKREAAKALGADEV-VNSRNADEMAAHLKSFDFILNTVA 266 (369)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHTCSEE-EETTCHHHHHTTTTCEEEEEECCS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCcEE-eccccHHHHHHhhcCCCEEEECCC
Confidence 34679999998889999999999999999999999888776655555432 35554443 22256788877664
|
| >1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1 | Back alignment and structure |
|---|
Probab=96.40 E-value=0.0074 Score=52.64 Aligned_cols=36 Identities=25% Similarity=0.224 Sum_probs=31.8
Q ss_pred CCCCe-EEEE-c-C-----------------ChhhHHHHHHHHhCCCEEEEEEeCc
Q 017914 57 QSPNR-MLIL-G-M-----------------GFVGRIFAEKIKNQGWVVSGTCTNV 92 (364)
Q Consensus 57 ~~~~~-vlVt-G-t-----------------G~iG~~l~~~L~~~g~~V~~~~r~~ 92 (364)
..+++ |||| | | |..|.+++++++++|++|+.+.|..
T Consensus 34 l~gk~~VLITaGgT~EpID~DpVRfItN~SSGkmG~aiAe~~~~~Ga~V~lv~g~~ 89 (313)
T 1p9o_A 34 AQGRRVVLVTSGGTKVPLEARPVRFLDNFSSGRRGATSAEAFLAAGYGVLFLYRAR 89 (313)
T ss_dssp HTTCCEEEEEESBCEEESSSSCSEEEEECCCCHHHHHHHHHHHHTTCEEEEEEETT
T ss_pred hcCCeEEEEeCCCcccccCCCceeEecCCCCcHHHHHHHHHHHHCCCEEEEEecCC
Confidence 34566 9999 7 9 9999999999999999999999954
|
| >3k5i_A Phosphoribosyl-aminoimidazole carboxylase; purine biosynthesis, ATP-grAsp, lyase; HET: NHE ADP AIR; 2.00A {Aspergillus clavatus} PDB: 3k5h_A* | Back alignment and structure |
|---|
Probab=96.40 E-value=0.0075 Score=55.17 Aligned_cols=68 Identities=15% Similarity=0.028 Sum_probs=48.5
Q ss_pred CCCCeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCChhhH--HhhccCceee
Q 017914 57 QSPNRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETAL--MILTTLKNYT 125 (364)
Q Consensus 57 ~~~~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~--~~~~~~d~v~ 125 (364)
+++++|+|+|.|.+|+.+++.+.+.|++|++++ .+.............+.+|+.|.+. ...+.+|+|+
T Consensus 22 m~~~~I~ilGgG~lg~~l~~aa~~lG~~v~~~d-~~~~p~~~~ad~~~~~~~~~~d~~~l~~~a~~~d~i~ 91 (403)
T 3k5i_A 22 WNSRKVGVLGGGQLGRMLVESANRLNIQVNVLD-ADNSPAKQISAHDGHVTGSFKEREAVRQLAKTCDVVT 91 (403)
T ss_dssp CSCCEEEEECCSHHHHHHHHHHHHHTCEEEEEE-STTCTTGGGCCSSCCEESCTTCHHHHHHHHTTCSEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEE-CCCCcHHHhccccceeecCCCCHHHHHHHHHhCCEEE
Confidence 346799999999999999999999999999999 5432221111222456788888663 5556677654
|
| >1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A* | Back alignment and structure |
|---|
Probab=96.40 E-value=0.01 Score=53.66 Aligned_cols=96 Identities=14% Similarity=0.007 Sum_probs=62.8
Q ss_pred CCCCeEEEEcCChhhHHHHHHHHhCCC-EEEEEEeCchhhhhhhhCCceEEEccCCh--hhH-H---hh--ccCceeeEE
Q 017914 57 QSPNRMLILGMGFVGRIFAEKIKNQGW-VVSGTCTNVMKKKELEQSGFDVHLFNANE--TAL-M---IL--TTLKNYTHL 127 (364)
Q Consensus 57 ~~~~~vlVtGtG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~l~~~~~~~~~~D~~~--~~~-~---~~--~~~d~v~~~ 127 (364)
..+.+|||+|+|.+|...++.+...|. +|+++++++++.+.+.+.++..+ .|..+ .++ + .+ .++|.|+.+
T Consensus 190 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~v-i~~~~~~~~~~~~i~~~t~gg~Dvvid~ 268 (373)
T 1p0f_A 190 TPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIELGATEC-LNPKDYDKPIYEVICEKTNGGVDYAVEC 268 (373)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHTTCSEE-ECGGGCSSCHHHHHHHHTTSCBSEEEEC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCcEE-EecccccchHHHHHHHHhCCCCCEEEEC
Confidence 346799999999999999998888898 89999998888777766676533 34443 122 1 11 257888877
Q ss_pred EEecCCCCCCCChhhhHHHHHHHHhhcCCccEEEEEcc
Q 017914 128 LVSIPPLEGTGDPMLKHGELLRSTLMNGHLQWLGYLSS 165 (364)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~r~v~~Ss 165 (364)
++. .......+..++.. ..++|.++.
T Consensus 269 ~g~-----------~~~~~~~~~~l~~~-~G~iv~~G~ 294 (373)
T 1p0f_A 269 AGR-----------IETMMNALQSTYCG-SGVTVVLGL 294 (373)
T ss_dssp SCC-----------HHHHHHHHHTBCTT-TCEEEECCC
T ss_pred CCC-----------HHHHHHHHHHHhcC-CCEEEEEcc
Confidence 642 11223344445444 137887653
|
| >3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=96.40 E-value=0.0057 Score=52.01 Aligned_cols=66 Identities=11% Similarity=0.146 Sum_probs=49.3
Q ss_pred CCCeEEEEcCChhhHHHHHHHHhCCC-EEEEEEeCchhhhhhhhCCceEEEccCChhhHHhhccCceeeEEE
Q 017914 58 SPNRMLILGMGFVGRIFAEKIKNQGW-VVSGTCTNVMKKKELEQSGFDVHLFNANETALMILTTLKNYTHLL 128 (364)
Q Consensus 58 ~~~~vlVtGtG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~~~~~~~d~v~~~~ 128 (364)
.+ +|+|+|+|.+|+.++..|.+.|. +|++.+|+.++.+.+.+ ....+ ++.+.. ..+.++|.|+++.
T Consensus 108 ~~-~vliiGaGg~a~ai~~~L~~~G~~~I~v~nR~~~ka~~la~-~~~~~--~~~~~~-~~~~~aDiVInat 174 (253)
T 3u62_A 108 KE-PVVVVGAGGAARAVIYALLQMGVKDIWVVNRTIERAKALDF-PVKIF--SLDQLD-EVVKKAKSLFNTT 174 (253)
T ss_dssp CS-SEEEECCSHHHHHHHHHHHHTTCCCEEEEESCHHHHHTCCS-SCEEE--EGGGHH-HHHHTCSEEEECS
T ss_pred CC-eEEEECcHHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHH-HcccC--CHHHHH-hhhcCCCEEEECC
Confidence 45 89999999999999999999998 89999999888776643 22221 222221 4567889888765
|
| >4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A | Back alignment and structure |
|---|
Probab=96.38 E-value=0.004 Score=58.07 Aligned_cols=43 Identities=16% Similarity=0.386 Sum_probs=38.5
Q ss_pred CCCeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhh
Q 017914 58 SPNRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQ 100 (364)
Q Consensus 58 ~~~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~ 100 (364)
.+|+|.|+|.|.+|..++..|.+.||+|++.+|++++.+.+.+
T Consensus 3 ~~~kIgiIGlG~MG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~ 45 (484)
T 4gwg_A 3 AQADIALIGLAVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLA 45 (484)
T ss_dssp CCBSEEEECCSHHHHHHHHHHHHTTCCEEEECSSTHHHHHHHH
T ss_pred CCCEEEEEChhHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHh
Confidence 4578999999999999999999999999999999888776644
|
| >3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori} | Back alignment and structure |
|---|
Probab=96.35 E-value=0.0064 Score=54.41 Aligned_cols=92 Identities=14% Similarity=0.045 Sum_probs=63.9
Q ss_pred CCCCeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCChhhHHhhccCceeeEEEEecCCCCC
Q 017914 57 QSPNRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETALMILTTLKNYTHLLVSIPPLEG 136 (364)
Q Consensus 57 ~~~~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~~~~~~~d~v~~~~~~~~~~~~ 136 (364)
..+.+|||+|+|.+|...++.+...|.+|+++++++++.+.+.+.+...+. .+.+. ..+++|.|+.+++..
T Consensus 175 ~~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~v~---~~~~~-~~~~~D~vid~~g~~----- 245 (348)
T 3two_A 175 TKGTKVGVAGFGGLGSMAVKYAVAMGAEVSVFARNEHKKQDALSMGVKHFY---TDPKQ-CKEELDFIISTIPTH----- 245 (348)
T ss_dssp CTTCEEEEESCSHHHHHHHHHHHHTTCEEEEECSSSTTHHHHHHTTCSEEE---SSGGG-CCSCEEEEEECCCSC-----
T ss_pred CCCCEEEEECCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHhcCCCeec---CCHHH-HhcCCCEEEECCCcH-----
Confidence 456899999999999999999999999999999998888777777766554 33331 122778888766421
Q ss_pred CCChhhhHHHHHHHHhhcCCccEEEEEcc
Q 017914 137 TGDPMLKHGELLRSTLMNGHLQWLGYLSS 165 (364)
Q Consensus 137 ~~~~~~~~~~~l~~a~~~~~~~r~v~~Ss 165 (364)
......+..++..| +++.++.
T Consensus 246 ------~~~~~~~~~l~~~G--~iv~~G~ 266 (348)
T 3two_A 246 ------YDLKDYLKLLTYNG--DLALVGL 266 (348)
T ss_dssp ------CCHHHHHTTEEEEE--EEEECCC
T ss_pred ------HHHHHHHHHHhcCC--EEEEECC
Confidence 11233444555444 7887653
|
| >3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus} | Back alignment and structure |
|---|
Probab=96.33 E-value=0.009 Score=53.42 Aligned_cols=93 Identities=15% Similarity=0.095 Sum_probs=60.8
Q ss_pred CCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCChh--h-HHhh--ccCceeeEEEEec
Q 017914 58 SPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANET--A-LMIL--TTLKNYTHLLVSI 131 (364)
Q Consensus 58 ~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~--~-~~~~--~~~d~v~~~~~~~ 131 (364)
.+.+|||+| +|.+|...++.+...|.+|+++++++++.+.+.+.+...+ .|..+. + .... .++|+|+.+++.
T Consensus 150 ~g~~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~v-i~~~~~~~~~~~~~~~~g~Dvv~d~~g~- 227 (346)
T 3fbg_A 150 EGKTLLIINGAGGVGSIATQIAKAYGLRVITTASRNETIEWTKKMGADIV-LNHKESLLNQFKTQGIELVDYVFCTFNT- 227 (346)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCSHHHHHHHHHHTCSEE-ECTTSCHHHHHHHHTCCCEEEEEESSCH-
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCcEE-EECCccHHHHHHHhCCCCccEEEECCCc-
Confidence 567999996 9999999999999999999999998888776666565433 233331 1 1122 247777776531
Q ss_pred CCCCCCCChhhhHHHHHHHHhhcCCccEEEEEc
Q 017914 132 PPLEGTGDPMLKHGELLRSTLMNGHLQWLGYLS 164 (364)
Q Consensus 132 ~~~~~~~~~~~~~~~~l~~a~~~~~~~r~v~~S 164 (364)
.......+.+++..| ++|.++
T Consensus 228 ----------~~~~~~~~~~l~~~G--~iv~~~ 248 (346)
T 3fbg_A 228 ----------DMYYDDMIQLVKPRG--HIATIV 248 (346)
T ss_dssp ----------HHHHHHHHHHEEEEE--EEEESS
T ss_pred ----------hHHHHHHHHHhccCC--EEEEEC
Confidence 112234445555544 677554
|
| >2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A* | Back alignment and structure |
|---|
Probab=96.32 E-value=0.0096 Score=53.80 Aligned_cols=96 Identities=15% Similarity=0.079 Sum_probs=62.3
Q ss_pred CCCCeEEEEcCChhhHHHHHHHHhCCC-EEEEEEeCchhhhhhhhCCceEEEccCCh--hhH-Hhh-----ccCceeeEE
Q 017914 57 QSPNRMLILGMGFVGRIFAEKIKNQGW-VVSGTCTNVMKKKELEQSGFDVHLFNANE--TAL-MIL-----TTLKNYTHL 127 (364)
Q Consensus 57 ~~~~~vlVtGtG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~l~~~~~~~~~~D~~~--~~~-~~~-----~~~d~v~~~ 127 (364)
..+.+|||+|+|.+|...++.+...|. +|+++++++++.+.+.+.++..+ .|..+ .++ +.+ .++|.|+.+
T Consensus 189 ~~g~~VlV~GaG~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~v-i~~~~~~~~~~~~v~~~~~~g~D~vid~ 267 (373)
T 2fzw_A 189 EPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATEC-INPQDFSKPIQEVLIEMTDGGVDYSFEC 267 (373)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHHTCSEE-ECGGGCSSCHHHHHHHHTTSCBSEEEEC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceE-eccccccccHHHHHHHHhCCCCCEEEEC
Confidence 346799999999999999999888898 89999998888776665565432 34443 122 111 257888877
Q ss_pred EEecCCCCCCCChhhhHHHHHHHHhhcCCccEEEEEcc
Q 017914 128 LVSIPPLEGTGDPMLKHGELLRSTLMNGHLQWLGYLSS 165 (364)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~r~v~~Ss 165 (364)
++. .......+..++.. ..++|.++.
T Consensus 268 ~g~-----------~~~~~~~~~~l~~~-~G~iv~~G~ 293 (373)
T 2fzw_A 268 IGN-----------VKVMRAALEACHKG-WGVSVVVGV 293 (373)
T ss_dssp SCC-----------HHHHHHHHHTBCTT-TCEEEECSC
T ss_pred CCc-----------HHHHHHHHHhhccC-CcEEEEEec
Confidence 642 11223444555544 137887653
|
| >1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A* | Back alignment and structure |
|---|
Probab=96.32 E-value=0.005 Score=55.12 Aligned_cols=72 Identities=18% Similarity=0.194 Sum_probs=51.0
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhC-CCEEEEEEeCchhhhhhhhCCceEEEccCChhhH-----Hhh--ccCceeeEE
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQ-GWVVSGTCTNVMKKKELEQSGFDVHLFNANETAL-----MIL--TTLKNYTHL 127 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~-----~~~--~~~d~v~~~ 127 (364)
..+.+|||+| +|.||..+++.+... |++|+++++++++.+.+.+.+...+ .|..+.+. ... .++|.++++
T Consensus 169 ~~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~d~vi~~ 247 (347)
T 1jvb_A 169 DPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRAGADYV-INASMQDPLAEIRRITESKGVDAVIDL 247 (347)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHHHTCSEE-EETTTSCHHHHHHHHTTTSCEEEEEES
T ss_pred CCCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCCEE-ecCCCccHHHHHHHHhcCCCceEEEEC
Confidence 3567999999 679999999999999 9999999998877666554454322 35554332 122 257777776
Q ss_pred EE
Q 017914 128 LV 129 (364)
Q Consensus 128 ~~ 129 (364)
++
T Consensus 248 ~g 249 (347)
T 1jvb_A 248 NN 249 (347)
T ss_dssp CC
T ss_pred CC
Confidence 64
|
| >1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A* | Back alignment and structure |
|---|
Probab=96.32 E-value=0.0074 Score=55.08 Aligned_cols=50 Identities=18% Similarity=0.298 Sum_probs=42.1
Q ss_pred CCCeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEE
Q 017914 58 SPNRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHL 107 (364)
Q Consensus 58 ~~~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~ 107 (364)
.+.+|+|+|.|.+|..+++.+...|.+|++++|++.+...+.+.+..++.
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~Ga~V~v~D~~~~~~~~~~~lGa~~~~ 220 (401)
T 1x13_A 171 PPAKVMVIGAGVAGLAAIGAANSLGAIVRAFDTRPEVKEQVQSMGAEFLE 220 (401)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCGGGHHHHHHTTCEECC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHcCCEEEE
Confidence 46799999999999999999999999999999998876666555666543
|
| >4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A | Back alignment and structure |
|---|
Probab=96.32 E-value=0.0076 Score=55.97 Aligned_cols=48 Identities=23% Similarity=0.325 Sum_probs=40.9
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCce
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFD 104 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~ 104 (364)
..+.+|||+| +|.||...++.+...|.+|+++++++++.+.+.+.+..
T Consensus 219 ~~g~~VlV~GasG~iG~~a~qla~~~Ga~vi~~~~~~~~~~~~~~lGa~ 267 (447)
T 4a0s_A 219 KQGDIVLIWGASGGLGSYAIQFVKNGGGIPVAVVSSAQKEAAVRALGCD 267 (447)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCC
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCC
Confidence 4567999999 79999999999999999999999988887776666654
|
| >3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A | Back alignment and structure |
|---|
Probab=96.30 E-value=0.0073 Score=53.90 Aligned_cols=68 Identities=12% Similarity=0.124 Sum_probs=50.5
Q ss_pred CCCCeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCChhhHHhhccCceeeEEEE
Q 017914 57 QSPNRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETALMILTTLKNYTHLLV 129 (364)
Q Consensus 57 ~~~~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~~~~~~~d~v~~~~~ 129 (364)
..+|+|.|+|.|.||+.+++.|...|++|++.+|++.........++..+ .+.+ +.+..+|+|+....
T Consensus 162 l~gktvGIIG~G~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~----~~l~-ell~~aDvV~l~~P 229 (351)
T 3jtm_A 162 LEGKTIGTVGAGRIGKLLLQRLKPFGCNLLYHDRLQMAPELEKETGAKFV----EDLN-EMLPKCDVIVINMP 229 (351)
T ss_dssp STTCEEEEECCSHHHHHHHHHHGGGCCEEEEECSSCCCHHHHHHHCCEEC----SCHH-HHGGGCSEEEECSC
T ss_pred ccCCEEeEEEeCHHHHHHHHHHHHCCCEEEEeCCCccCHHHHHhCCCeEc----CCHH-HHHhcCCEEEECCC
Confidence 56789999999999999999999999999999998654443333344321 1222 57788998887664
|
| >3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium} | Back alignment and structure |
|---|
Probab=96.29 E-value=0.0088 Score=49.62 Aligned_cols=67 Identities=15% Similarity=0.095 Sum_probs=49.6
Q ss_pred CCCCCeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCchh-hhhhh-hCCceEEEccCChhhHHhhccCceee
Q 017914 56 WQSPNRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMK-KKELE-QSGFDVHLFNANETALMILTTLKNYT 125 (364)
Q Consensus 56 ~~~~~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~~-~~~l~-~~~~~~~~~D~~~~~~~~~~~~d~v~ 125 (364)
+..+++|||+|.|-+|...++.|++.|.+|++++..... ...+. ..++.++..++.. ..+.++|.|+
T Consensus 28 ~L~gk~VLVVGgG~va~~ka~~Ll~~GA~VtVvap~~~~~l~~l~~~~~i~~i~~~~~~---~dL~~adLVI 96 (223)
T 3dfz_A 28 DLKGRSVLVVGGGTIATRRIKGFLQEGAAITVVAPTVSAEINEWEAKGQLRVKRKKVGE---EDLLNVFFIV 96 (223)
T ss_dssp CCTTCCEEEECCSHHHHHHHHHHGGGCCCEEEECSSCCHHHHHHHHTTSCEEECSCCCG---GGSSSCSEEE
T ss_pred EcCCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHcCCcEEEECCCCH---hHhCCCCEEE
Confidence 466799999999999999999999999999999875432 22332 2457777666654 3456667665
|
| >1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1 | Back alignment and structure |
|---|
Probab=96.28 E-value=0.0065 Score=55.57 Aligned_cols=69 Identities=17% Similarity=0.194 Sum_probs=51.2
Q ss_pred CCCCeEEEEcCChhhHHHHHHHHhCCC-EEEEEEeCchhhhhhh-hCCceEEEccCChhhHHhhccCceeeEEE
Q 017914 57 QSPNRMLILGMGFVGRIFAEKIKNQGW-VVSGTCTNVMKKKELE-QSGFDVHLFNANETALMILTTLKNYTHLL 128 (364)
Q Consensus 57 ~~~~~vlVtGtG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~l~-~~~~~~~~~D~~~~~~~~~~~~d~v~~~~ 128 (364)
..+++|+|+|+|.+|+.+++.|...|. +|++.+|+.++...+. ..+... .+..+.. ..+.++|.|+.+.
T Consensus 165 l~g~~VlIiGaG~iG~~~a~~l~~~G~~~V~v~~r~~~ra~~la~~~g~~~--~~~~~l~-~~l~~aDvVi~at 235 (404)
T 1gpj_A 165 LHDKTVLVVGAGEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLGGEA--VRFDELV-DHLARSDVVVSAT 235 (404)
T ss_dssp CTTCEEEEESCCHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHTCEE--CCGGGHH-HHHHTCSEEEECC
T ss_pred ccCCEEEEEChHHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCce--ecHHhHH-HHhcCCCEEEEcc
Confidence 467899999999999999999999998 9999999987754332 234443 2332222 4567899998875
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 364 | ||||
| d1r6da_ | 322 | c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) { | 2e-17 | |
| d1kewa_ | 361 | c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) { | 1e-10 | |
| d2b69a1 | 312 | c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 | 4e-09 | |
| d1sb8a_ | 341 | c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase W | 6e-09 | |
| d1db3a_ | 357 | c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escheric | 3e-08 | |
| d1t2aa_ | 347 | c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (H | 8e-08 | |
| d2q46a1 | 252 | c.2.1.2 (A:2-253) Hypothetical protein At5g02240 ( | 5e-07 | |
| d1n7ha_ | 339 | c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cr | 7e-07 | |
| d2c5aa1 | 363 | c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {T | 1e-06 | |
| d1oc2a_ | 346 | c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) { | 2e-06 | |
| d1e6ua_ | 315 | c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimeras | 4e-06 | |
| d1n2sa_ | 298 | c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reduct | 3e-05 | |
| d1qyca_ | 307 | c.2.1.2 (A:) Phenylcoumaran benzylic ether reducta | 9e-05 | |
| d1hdoa_ | 205 | c.2.1.2 (A:) Biliverdin IX beta reductase {Human ( | 0.001 |
| >d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]} Length = 322 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptomyces venezuelae [TaxId: 54571]
Score = 79.9 bits (196), Expect = 2e-17
Identities = 49/324 (15%), Positives = 97/324 (29%), Gaps = 46/324 (14%)
Query: 62 MLIL---GMGFVGRIFAEKIKNQGWVVSGTC--------TNVMKKKELEQSGFDVHL-FN 109
M +L G GF+G F ++ + T + L D L F
Sbjct: 1 MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFV 60
Query: 110 ANETALMILTTLKNYTHLLVSIPPLEGTGDPMLKHGELLRSTLMNGHLQWLG-------- 161
+ L + + E D + + T + G L
Sbjct: 61 HGDIRDAGLLARELRGVDAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAGVG 120
Query: 162 ---YLSSTGVYGHSGGAWVDEDYPANPTTELGRLRLSAEKGWLNLGRDLGISAQVFRLGG 218
++S+ VYG E P P + + ++ R G+ ++ R
Sbjct: 121 RVVHVSTNQVYGSIDSGSWTESSPLEPNSPYAASKAGSDLVARAYHRTYGLDVRITRCCN 180
Query: 219 IYGPGRSS---VDTIIKQLPLSEGQKMR---RARQYTSRIHVDDICQVLSASIDKPSAWN 272
YGP + + + L +G + +H DD C+ ++ + A
Sbjct: 181 NYGPYQHPEKLIPLFVTN--LLDGGTLPLYGDGANVREWVHTDDHCRGIALVLAGGRAGE 238
Query: 273 VYNVVDDDPAPREEVFAYAWDLVEKKWPGLLKHRKPRENTESSNEKGSSRGEKRVSNVRM 332
+Y++ E+ D + W ++ R+ + + ++
Sbjct: 239 IYHIGGGLELTNRELTGILLDSLGADWS-SVRKVADRKGHDL---------RYSLDGGKI 288
Query: 333 KKELGVRLWHPSY--KSGLQSIIN 354
++ELG + P GL +
Sbjct: 289 ERELG---YRPQVSFADGLARTVR 309
|
| >d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 361 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Score = 60.2 bits (145), Expect = 1e-10
Identities = 37/211 (17%), Positives = 74/211 (35%), Gaps = 26/211 (12%)
Query: 162 YLSSTGVYGHSGGAWVD----------EDYPANPTTELGRLRLSAEKGWLNLGRDLGISA 211
++S+ VYG E P++ + S++ R G+
Sbjct: 130 HISTDEVYGDLPHPDEVENSVTLPLFTETTAYAPSSPYSASKASSDHLVRAWRRTYGLPT 189
Query: 212 QVFRLGGIYGPGRSS---VDTIIKQLPLSEGQKMR---RARQYTSRIHVDDICQVLSASI 265
V YGP + +I EG+ + + Q ++V+D + L +
Sbjct: 190 IVTNCSNNYGPYHFPEKLIPLVILN--ALEGKPLPIYGKGDQIRDWLYVEDHARALHMVV 247
Query: 266 DKPSAWNVYNVVDDDPAPREEVFAYAWDLVEKKWPGLLKHRKPRENTESSNEKGSSRGEK 325
+ A YN+ + +V DL+++ P +R+ + G R
Sbjct: 248 TEGKAGETYNIGGHNEKKNLDVVFTICDLLDEIVPKATSYREQITYVA--DRPGHDR-RY 304
Query: 326 RVSNVRMKKELGVRLWHPSY--KSGLQSIIN 354
+ ++ +ELG W P +SG++ +
Sbjct: 305 AIDAGKISRELG---WKPLETFESGIRKTVE 332
|
| >d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 312 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-glucuronate decarboxylase 1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 54.7 bits (131), Expect = 4e-09
Identities = 57/317 (17%), Positives = 98/317 (30%), Gaps = 40/317 (12%)
Query: 61 RMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETALMILT 119
R+LI G GFVG +K+ G V+ +K + F ++
Sbjct: 3 RILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEPL 62
Query: 120 TLKNYT--HLLVSIPPLEGTGDPMLKHGELLRSTL-----MNGHLQWLGYLSSTGVYGHS 172
++ HL P +P+ TL L S++ VYG
Sbjct: 63 YIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGARLLLASTSEVYGDP 122
Query: 173 GGAWVDEDY-----PANPTTELGRLRLSAEKGWLNLGRDLGISAQVFRLGGIYGPGRSSV 227
EDY P P + AE + G+ +V R+ +GP
Sbjct: 123 EVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMN 182
Query: 228 DT-----IIKQLPLSEGQKMR---RARQYTSRIHVDDICQVLSASIDKPSAWNVYNVVDD 279
D I Q +G+ + Q + +V D+ L A ++ + + N+ +
Sbjct: 183 DGRVVSNFILQ--ALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSNVS-SPVNLGNP 239
Query: 280 DPAPREEVFAYAWDLVEKKWPGLLKHRKPRENTESSNEKGSSRGEKRVSNVRMKKELGVR 339
+ E +LV + +++ + K LG
Sbjct: 240 EEHTILEFAQLIKNLVGSGSEIQFLSEAQDDPQ-----------KRKPDIKKAKLMLG-- 286
Query: 340 LWHPSY--KSGLQSIIN 354
W P + GL I+
Sbjct: 287 -WEPVVPLEEGLNKAIH 302
|
| >d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]} Length = 341 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-N-acetylglucosamine 4-epimerase WbpP species: Pseudomonas aeruginosa [TaxId: 287]
Score = 54.6 bits (130), Expect = 6e-09
Identities = 47/329 (14%), Positives = 90/329 (27%), Gaps = 41/329 (12%)
Query: 58 SPNRMLILG-MGFVGRIFAEKIKNQGWVV-------SGTCTNVMKKKEL--EQSGFDVHL 107
P LI G GF+G E + V +G N+ + + L E+ +
Sbjct: 15 QPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKF 74
Query: 108 FNANETALMILTTLKNYTHLLVSIPPLEGTGDPMLKHGELLRSTLM----------NGHL 157
+ L ++ L + + + + +
Sbjct: 75 IQGDIRNLDDCNNACAGVDYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAKV 134
Query: 158 QWLGYLSSTGVYGHSGGAWVDEDYPANPTTELGRLRLSAEKGWLNLGRDLGISAQVFRLG 217
Q Y +S+ YG G ED P + + E R G S R
Sbjct: 135 QSFTYAASSSTYGDHPGLPKVEDTIGKPLSPYAVTKYVNELYADVFSRCYGFSTIGLRYF 194
Query: 218 GIYGPGRSSVDTIIKQLPLSEGQKMRR--------ARQYTSRIHVDDICQVLSASIDKPS 269
++G + +P ++ ++++ Q +
Sbjct: 195 NVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGETSRDFCYIENTVQANLLAATAGL 254
Query: 270 --AWNVYNVVDDDPAPREEVFAYAWDLVEKKWPGLLKHRKPRENTESSNEKGSSRGEKRV 327
VYN+ ++F D + + HR+P + S
Sbjct: 255 DARNQVYNIAVGGRTSLNQLFFALRDGLAENGVS--YHREPVYRDFREGDVRHSLA---- 308
Query: 328 SNVRMKKELGVRLWHPSY--KSGLQSIIN 354
+ K LG + P Y +G+ +
Sbjct: 309 DISKAAKLLG---YAPKYDVSAGVALAMP 334
|
| >d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} Length = 357 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Escherichia coli [TaxId: 562]
Score = 52.1 bits (124), Expect = 3e-08
Identities = 43/344 (12%), Positives = 91/344 (26%), Gaps = 60/344 (17%)
Query: 66 GMGFVGRIFAEKIKNQGWVVSGTC-----------TNVMKKKELEQSGFDVHLFNANETA 114
G G AE + +G+ V G ++ + F +H + ++T+
Sbjct: 9 VTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTS 68
Query: 115 LMILTTLKNYTHLLVSIPPLEGTGDPMLKHGELLRSTLMNGHLQWLG------------- 161
+ + + ++ + M G L+ L
Sbjct: 69 NLTRILREVQPDEVYNLGAMSHVAVSFESPEYTADVDAM-GTLRLLEAIRFLGLEKKTRF 127
Query: 162 -YLSSTGVYGHSGGAWVDEDYPANPTTELGRLRLSAEKGWLNLGRDLGISAQVFRLGGIY 220
S++ +YG E P P + +L A +N G+ A L
Sbjct: 128 YQASTSELYGLVQEIPQKETTPFYPRSPYAVAKLYAYWITVNYRESYGMYACNGILFNHE 187
Query: 221 GPGRSS------VDTIIKQLPLSEGQKMRRARQYTSR--IHVDDICQVLSASIDKPSAWN 272
P R + I + + + R H D ++ + +
Sbjct: 188 SPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAKDYVKMQWMMLQQEQP-E 246
Query: 273 VYNVVDDDP-----------------APREEVFAYAWDLVEKKWPGLLKHRKPRENTESS 315
+ + E +V KP + +
Sbjct: 247 DFVIATGVQYSVRQFVEMAAAQLGIKLRFEGTGVEEKGIVVSVTGHDAPGVKPGDVIIAV 306
Query: 316 NEKGSSRGEKR---VSNVRMKKELGVRLWHPSYKSGLQSIINQM 356
+ + E + ++LG W P L+ ++++M
Sbjct: 307 DPRYFRPAEVETLLGDPTKAHEKLG---WKPEI--TLREMVSEM 345
|
| >d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]} Length = 347 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Human (Homo sapiens) [TaxId: 9606]
Score = 51.1 bits (121), Expect = 8e-08
Identities = 36/333 (10%), Positives = 82/333 (24%), Gaps = 47/333 (14%)
Query: 66 GMGFVGRIFAEKIKNQGWVVSGTC-----TNVMKKKELEQ-------SGFDVHLFNANET 113
G G AE + +G+ V G N + + L + +H + ++
Sbjct: 9 ITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDS 68
Query: 114 ALMILTTLKNYTHLLVSIPPLEGTGDPMLKHGELLRSTLMNGHLQW-------------L 160
++ + + ++ +
Sbjct: 69 TCLVKIINEVKPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVKF 128
Query: 161 GYLSSTGVYGHSGGAWVDEDYPANPTTELGRLRLSAEKGWLNLGRDLGISAQVFRLGGIY 220
S++ +YG E P P + G +L A +N + A L
Sbjct: 129 YQASTSELYGKVQEIPQKETTPFYPRSPYGAAKLYAYWIVVNFREAYNLFAVNGILFNHE 188
Query: 221 GPGRSSVDTI--------IKQLPLSEGQKMRRARQYTSRIHVDDICQVLSASIDKPSAWN 272
P R + L E + H D + + + +
Sbjct: 189 SPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRDWGHAKDYVEAMWLMLQNDEPED 248
Query: 273 VYNVVDDDPAPREEVFAYAWDLVEKKWPGLLKHRKPRENTESSNEKGSSRGEKR------ 326
+ + RE V + + + E+ + +
Sbjct: 249 FVIATGEVHSVREFVEKSFLHIGKTIVWEGKNENEVGRCKETGKVHVTVDLKYYRPTEVD 308
Query: 327 ---VSNVRMKKELGVRLWHPSY--KSGLQSIIN 354
+ K++L W P ++ +++
Sbjct: 309 FLQGDCTKAKQKLN---WKPRVAFDELVREMVH 338
|
| >d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 252 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein At5g02240 (T7H20 290) species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Score = 47.9 bits (112), Expect = 5e-07
Identities = 35/246 (14%), Positives = 74/246 (30%), Gaps = 23/246 (9%)
Query: 61 RMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETAL---- 115
+L+ G G G+I +K+K V + E+ G + +F + T
Sbjct: 5 TVLVTGASGRTGQIVYKKLKEGSDKFVAKG-LVRSAQGKEKIGGEADVFIGDITDADSIN 63
Query: 116 --------MILTTLKNYTHLLVSIPPLEGTGDPMLKHGELLRSTLMNGHLQWLGYLSSTG 167
+++ T P G + + + G+ G + G
Sbjct: 64 PAFQGIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAG 123
Query: 168 VYGHSGGAWVDEDYPANPTTELGRLR-LSAEKGWLNLGRDLGISAQVFRLGGIYGPGRSS 226
V + P +P +LG L ++ D G + R GG+
Sbjct: 124 VKHIVVVGSMGGTNPDHPLNKLGNGNILVWKRKAEQYLADSGTPYTIIRAGGLLDKEGGV 183
Query: 227 VDTIIKQLPLSEGQKMRRARQYTSRIHVDDICQVLSASIDKPSAWN-VYNVVDDDPAPRE 285
+ ++ G+ + T + D+ +V ++ A N +++
Sbjct: 184 RELLV-------GKDDELLQTDTKTVPRADVAEVCIQALLFEEAKNKAFDLGSKPEGTST 236
Query: 286 EVFAYA 291
+
Sbjct: 237 PTKDFK 242
|
| >d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 339 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]
Score = 48.1 bits (113), Expect = 7e-07
Identities = 26/217 (11%), Positives = 65/217 (29%), Gaps = 23/217 (10%)
Query: 149 RSTLMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANPTTELGRLRLSAEKGWLNLGRDLG 208
RS ++ Y + + S E P +P + + +A +N G
Sbjct: 118 RSHTIDSGRTVKYYQAGSSEMFGSTPPPQSETTPFHPRSPYAASKCAAHWYTVNYREAYG 177
Query: 209 ISAQVFRLGGIYGPGRSSVDTIIKQLPLSEGQKMRRA---------RQYTSRIHVDDICQ 259
+ A L P R + + +++ + G+ + D +
Sbjct: 178 LFACNGILFNHESPRRGE-NFVTRKITRALGRIKVGLQTKLFLGNLQASRDWGFAGDYVE 236
Query: 260 VLSASIDKPSAWNVYNVVDDDPAPREEVFAYAWDLVEKKWPGLLKHRKPRENTESSNEKG 319
+ + + + ++ E + L + ++ E N +G
Sbjct: 237 AMWLMLQQEKPDDYVVATEEGHTVEEFLDVSFGYLGLNWKDYVEIDQRYFRPAEVDNLQG 296
Query: 320 SSRGEKRVSNVRMKKELGVRLWHPSY--KSGLQSIIN 354
+ + K+ LG W P + ++ +++
Sbjct: 297 DAS--------KAKEVLG---WKPQVGFEKLVKMMVD 322
|
| >d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 363 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose-3', 5'-epimerase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Score = 47.6 bits (112), Expect = 1e-06
Identities = 54/329 (16%), Positives = 96/329 (29%), Gaps = 47/329 (14%)
Query: 56 WQSPNRMLIL---GMGFVGRIFAEKIKNQGWVV-------SGTCTNVMKKKELEQSGFDV 105
W S N + I GF+ A ++K++G V + T M E V
Sbjct: 11 WPSEN-LKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTEDMFCDEFHLVDLRV 69
Query: 106 --HLFNANETALMILTTLKNYTHLLVSIPPLEGTGDPMLKHGELLRSTLMNGHLQWLGYL 163
+ E + + + + ++ Y
Sbjct: 70 MENCLKVTEGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYA 129
Query: 164 SSTGVYGHS-------GGAWVDEDYPANPTTELGRLRLSAEKGWLNLGRDLGISAQVFRL 216
SS +Y + +PA P G +L+ E+ + +D GI ++ R
Sbjct: 130 SSACIYPEFKQLETTNVSLKESDAWPAEPQDAFGLEKLATEELCKHYNKDFGIECRIGRF 189
Query: 217 GGIYGPGRSSVDTIIKQLPLSEGQKMRRARQYT---------SRIHVDDICQVLSASIDK 267
IYGP + K + ++ S +D+ + +
Sbjct: 190 HNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQTRSFTFIDECVEGVLRLTKS 249
Query: 268 PSAWNVYNVVDDDPAPREEVFAYAWDLVEKKWPGLLKHRKPRENTESSNEKGSSRGEKRV 327
N+ D+ E+ EKK P + H E +
Sbjct: 250 DFR-EPVNIGSDEMVSMNEMAEMVLSFEEKKLP--IHHIPGPEGVR----------GRNS 296
Query: 328 SNVRMKKELGVRLWHPSY--KSGLQSIIN 354
N +K++LG W P+ K GL+
Sbjct: 297 DNNLIKEKLG---WAPNMRLKEGLRITYF 322
|
| >d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 346 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Score = 46.9 bits (110), Expect = 2e-06
Identities = 50/322 (15%), Positives = 93/322 (28%), Gaps = 46/322 (14%)
Query: 66 GMGFVGRIFAEKIKNQGWVVSGTC-------TNVMKKKELEQSGFDVHLFNANETALM-- 116
G GF+G F + N V T N + + ++ + + + L+
Sbjct: 10 GAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAILGDRVELVVGDIADAELVDK 69
Query: 117 ILTTLKNYTHLLVSIPPLEGTGDPMLKHGELLRSTLMNGHLQWL-----GYLSSTGVYG- 170
+ H DP T ++S+ VYG
Sbjct: 70 LAAKADAIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYDIRFHHVSTDEVYGD 129
Query: 171 -----------HSGGAWVDEDYPANPTTELGRLRLSAEKGWLNLGRDLGISAQVFRLGGI 219
G + NP++ + +++ R G+ A +
Sbjct: 130 LPLREDLPGHGEGPGEKFTAETNYNPSSPYSSTKAASDLIVKAWVRSFGVKATISNCSNN 189
Query: 220 YGPGRSSVDTIIKQL-PLSEGQK---MRRARQYTSRIHVDDICQVLSASIDKPSAWNVYN 275
YGP + I +Q+ + G K + IH +D + A + K Y
Sbjct: 190 YGPYQHIEKFIPRQITNILAGIKPKLYGEGKNVRDWIHTNDHSTGVWAILTKGRMGETYL 249
Query: 276 VVDDDPAPREEVFAYAWDLVEKKWPGLLKHRKPRENTESSNEKGSSRGEKRVSNVRMKKE 335
+ D +EV + + + H R + + +++ E
Sbjct: 250 IGADGEKNNKEVLELILEKMGQPKD-AYDHVTDRAGHDL---------RYAIDASKLRDE 299
Query: 336 LGVRLWHPSY---KSGLQSIIN 354
LG W P + GL+ I
Sbjct: 300 LG---WTPQFTDFSEGLEETIQ 318
|
| >d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]} Length = 315 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) species: Escherichia coli [TaxId: 562]
Score = 45.6 bits (107), Expect = 4e-06
Identities = 44/315 (13%), Positives = 95/315 (30%), Gaps = 24/315 (7%)
Query: 58 SPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETALM 116
+ R+ I G G VG +++ +G V + L S F + +
Sbjct: 1 AKQRVFIAGHRGMVGSAIRRQLEQRGDVE--LVLRTRDELNLLDSRAVHDFFASERIDQV 58
Query: 117 ILTTLKNYTHLLVSIPPLEGTGDPMLKHGELLRSTLMNGHLQWLGYLSSTGVYGHSGGAW 176
L K + + P + M+ ++ + N + L +L S+ +Y
Sbjct: 59 YLAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQND-VNKLLFLGSSCIYPKLAKQP 117
Query: 177 VDEDYPANPTTEL-----GRLRLSAEKGWLNLGRDLGISAQVFRLGGIYGPGRSSVDTII 231
+ E T E +++ K + R G + +YGP + +
Sbjct: 118 MAESELLQGTLEPTNEPYAIAKIAGIKLCESYNRQYGRDYRSVMPTNLYGPHDNFHPSNS 177
Query: 232 KQLPLSEGQKMRRARQYTSRIHVD-------DICQVLSASIDKPSAWNVYNVVDDDPAPR 284
+P + Q + V + V + + + V +
Sbjct: 178 HVIPALLRRFHEATAQKAPDVVVWGSGTPMREFLHVDDMAAASIHVMELAHEVWLENTQP 237
Query: 285 EEVFAYAWDLVEKKWPGLLKHRKPRENTESSNEKGSSRGE---KRVSNVRMKKELGVRLW 341
V+ L + + +S+ + +++ +V +LG W
Sbjct: 238 MLSHINVGTGVDCTIRELAQTIAKVVGYKGRVVFDASKPDGTPRKLLDVTRLHQLG---W 294
Query: 342 HPSY--KSGLQSIIN 354
+ ++GL S
Sbjct: 295 YHEISLEAGLASTYQ 309
|
| >d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]} Length = 298 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) species: Salmonella enterica serovar typhimurium [TaxId: 90371]
Score = 43.0 bits (99), Expect = 3e-05
Identities = 39/297 (13%), Positives = 93/297 (31%), Gaps = 6/297 (2%)
Query: 61 RMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETALMILT 119
+L+ G G VG + G +++ + + +++
Sbjct: 2 NILLFGKTGQVGWELQRSLAPVGNLIALDVHSKEFCGDFSNPKGVAETVRKLRPDVIVNA 61
Query: 120 TLKNYTHLLVSIPPLEGTGDPMLKHGELLRSTLMNGHLQWLGYLSSTGVYGHSGGAWVDE 179
S P + + N W+ + S+ V+ +G E
Sbjct: 62 AAHTAVDKAESEPE---LAQLLNATSVEAIAKAANETGAWVVHYSTDYVFPGTGDIPWQE 118
Query: 180 DYPANPTTELGRLRLSAEKGWLNLGRDLGISAQVFRLGGIYGPGRSSVDTIIKQLPLSEG 239
+P G+ +L+ EK + I + G ++ + K+
Sbjct: 119 TDATSPLNVYGKTKLAGEKALQDNCPKHLIFRTSWVYAGKGNNFAKTMLRLAKERQTLSV 178
Query: 240 QKMRRARQYTSRIHVDDICQVLSASIDKPSAWNVYNVVDDDPAPREEVFAYAWDLVEKKW 299
+ + + D + +++KP +Y++V + A +D K
Sbjct: 179 INDQYGAPTGAELLADCTAHAIRVALNKPEVAGLYHLVAGGTTTWHDYAALVFDEARKAG 238
Query: 300 PGLLKHRKPRENTESSNEKGSSRGEKRVSNVRMKKELGVRLWHPSYKSGLQSIINQM 356
L T + S G R++ + ++ + L P ++ G++ ++ +M
Sbjct: 239 ITLALTELNAVPTSAYPTPASRPGNSRLNTEKFQRNFDLIL--PQWELGVKRMLTEM 293
|
| >d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]} Length = 307 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Phenylcoumaran benzylic ether reductase species: Loblolly pine (Pinus taeda) [TaxId: 3352]
Score = 41.7 bits (96), Expect = 9e-05
Identities = 31/247 (12%), Positives = 70/247 (28%), Gaps = 13/247 (5%)
Query: 58 SPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETALM 116
S +R+L++G G++GR A+ + G E++ + +
Sbjct: 2 SRSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVH 61
Query: 117 ILTTLKNYTHLLVSIPPLEGTGDPMLKHGELLRSTLMNGHLQWLGYLSSTGVYGHSGGAW 176
+ + ++ + G L + +N + + G
Sbjct: 62 G-----SIDDHASLVEAVKNVDVVISTVGSLQIESQVNIIKAIKEVGTVKRFFPSEFGND 116
Query: 177 VDEDYPANPTTELGRLRLSAEKGWLNLGRDLGISAQVFRLGGIYGPG-RSSVDTIIKQLP 235
VD + P + ++ + G G RS + P
Sbjct: 117 VDNVHAVEPAKSVFEVKAKVRRAIEAEGIPYTY----VSSNCFAGYFLRSLAQAGLTAPP 172
Query: 236 LSEGQKMRRARQYTSRIHVDDICQVLSASIDKPSAWN--VYNVVDDDPAPREEVFAYAWD 293
+ + + +DI ++D P N +Y + + E+ A
Sbjct: 173 RDKVVILGDGNARVVFVKEEDIGTFTIKAVDDPRTLNKTLYLRLPANTLSLNELVALWEK 232
Query: 294 LVEKKWP 300
++K
Sbjct: 233 KIDKTLE 239
|
| >d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 205 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Biliverdin IX beta reductase species: Human (Homo sapiens) [TaxId: 9606]
Score = 37.7 bits (86), Expect = 0.001
Identities = 23/218 (10%), Positives = 53/218 (24%), Gaps = 26/218 (11%)
Query: 58 SPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETALM 116
+ ++ I G G G + G+ V+ + + V + + + A +
Sbjct: 2 AVKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEGPRPAHVVVGDVLQAADV 61
Query: 117 ILTTLKNYT--HLLVSIPPLEGTGDPMLKHGELLRSTLMNGHLQWLGYLSSTGVYGHSGG 174
T LL + L T ++ + +G + + +S +
Sbjct: 62 DKTVAGQDAVIVLLGTRNDLSPTTVMSEGARNIVAAMKAHG-VDKVVACTSAFLLWDPTK 120
Query: 175 AWVDEDYPANPTTELGRLRLSAEKGWLNLGRDLGISAQVFRLGGIYGPGRSSVDTIIKQL 234
+ K R+ G+ I + T+
Sbjct: 121 VPPRLQAVTDDHIR-------MHKVL----RESGLKYVAVMPPHIGDQPLTGAYTVTLD- 168
Query: 235 PLSEGQKMRRARQYTSRIHVDDICQVLSASIDKPSAWN 272
R + I D+ + +
Sbjct: 169 ----------GRGPSRVISKHDLGHFMLRCLTTDEYDG 196
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 364 | |||
| d1db3a_ | 357 | GDP-mannose 4,6-dehydratase {Escherichia coli [Tax | 100.0 | |
| d1r6da_ | 322 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces | 100.0 | |
| d2b69a1 | 312 | UDP-glucuronate decarboxylase 1 {Human (Homo sapie | 100.0 | |
| d2c5aa1 | 363 | GDP-mannose-3', 5'-epimerase {Thale cress (Arabido | 100.0 | |
| d1sb8a_ | 341 | UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo | 100.0 | |
| d1udca_ | 338 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 100.0 | |
| d1kewa_ | 361 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus | 100.0 | |
| d1oc2a_ | 346 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus | 100.0 | |
| d1rpna_ | 321 | GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos | 100.0 | |
| d2blla1 | 342 | Polymyxin resistance protein ArnA (PrmI) {Escheric | 100.0 | |
| d1t2aa_ | 347 | GDP-mannose 4,6-dehydratase {Human (Homo sapiens) | 100.0 | |
| d1ek6a_ | 346 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 100.0 | |
| d1z45a2 | 347 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 100.0 | |
| d1gy8a_ | 383 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 100.0 | |
| d1n7ha_ | 339 | GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop | 100.0 | |
| d1e6ua_ | 315 | GDP-4-keto-6-deoxy-d-mannose epimerase/reductase ( | 100.0 | |
| d1i24a_ | 393 | Sulfolipid biosynthesis protein SQD1 {Thale cress | 100.0 | |
| d1y1pa1 | 342 | Aldehyde reductase II {Sporobolomyces salmonicolor | 100.0 | |
| d1orra_ | 338 | CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: | 100.0 | |
| d1vl0a_ | 281 | DTDP-4-dehydrorhamnose reductase RfbD {Clostridium | 100.0 | |
| d1rkxa_ | 356 | CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc | 100.0 | |
| d1eq2a_ | 307 | ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric | 100.0 | |
| d1n2sa_ | 298 | dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S | 99.97 | |
| d1hdoa_ | 205 | Biliverdin IX beta reductase {Human (Homo sapiens) | 99.95 | |
| d1qyda_ | 312 | Pinoresinol-lariciresinol reductase {Giant arborvi | 99.93 | |
| d2bkaa1 | 232 | TAT-interacting protein TIP30 {Human (Homo sapiens | 99.93 | |
| d1qyca_ | 307 | Phenylcoumaran benzylic ether reductase {Loblolly | 99.92 | |
| d2q46a1 | 252 | Hypothetical protein At5g02240 (T7H20_290) {Thale | 99.91 | |
| d1xgka_ | 350 | Negative transcriptional regulator NmrA {Aspergill | 99.89 | |
| d2a35a1 | 212 | Hypothetical protein PA4017 {Pseudomonas aeruginos | 99.89 | |
| d1nffa_ | 244 | Putative oxidoreductase Rv2002 {Mycobacterium tube | 99.73 | |
| d2d1ya1 | 248 | Hypothetical protein TTHA0369 {Thermus thermophilu | 99.73 | |
| d1uzma1 | 237 | beta-keto acyl carrier protein reductase {Mycobact | 99.72 | |
| d1q7ba_ | 243 | beta-keto acyl carrier protein reductase {Escheric | 99.72 | |
| d1ulsa_ | 242 | beta-keto acyl carrier protein reductase {Thermus | 99.72 | |
| d1cyda_ | 242 | Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1 | 99.71 | |
| d2c07a1 | 251 | beta-keto acyl carrier protein reductase {Malaria | 99.71 | |
| d1pr9a_ | 244 | Carbonyl reductase {Human (Homo sapiens) [TaxId: 9 | 99.7 | |
| d1hdca_ | 254 | 3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre | 99.7 | |
| d1k2wa_ | 256 | Sorbitol dehydrogenase {Rhodobacter sphaeroides [T | 99.69 | |
| d1vl8a_ | 251 | Gluconate 5-dehydrogenase {Thermotoga maritima [Ta | 99.69 | |
| d1ydea1 | 250 | Retinal dehydrogenase/reductase 3 {Human (Homo sap | 99.69 | |
| d1fmca_ | 255 | 7-alpha-hydroxysteroid dehydrogenase {Escherichia | 99.68 | |
| d1zk4a1 | 251 | R-specific alcohol dehydrogenase {Lactobacillus br | 99.68 | |
| d1ae1a_ | 258 | Tropinone reductase {Jimsonweed (Datura stramonium | 99.68 | |
| d1o5ia_ | 234 | beta-keto acyl carrier protein reductase {Thermoto | 99.67 | |
| d2ae2a_ | 259 | Tropinone reductase {Jimsonweed (Datura stramonium | 99.67 | |
| d2ew8a1 | 247 | (s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb | 99.67 | |
| d1zema1 | 260 | Xylitol dehydrogenase {Gluconobacter oxydans [TaxI | 99.66 | |
| d1iy8a_ | 258 | Levodione reductase {Corynebacterium aquaticum [Ta | 99.66 | |
| d2bgka1 | 268 | Rhizome secoisolariciresinol dehydrogenase {Mayapp | 99.66 | |
| d1xq1a_ | 259 | Tropinone reductase {Thale cress (Arabidopsis thal | 99.66 | |
| d2gdza1 | 254 | 15-hydroxyprostaglandin dehydrogenase, PGDH {Human | 99.66 | |
| d2ag5a1 | 245 | Dehydrogenase/reductase SDR family member 6, DHRS6 | 99.66 | |
| d1gega_ | 255 | meso-2,3-butanediol dehydrogenase {Klebsiella pneu | 99.65 | |
| d1geea_ | 261 | Glucose dehydrogenase {Bacillus megaterium [TaxId: | 99.65 | |
| d1x1ta1 | 260 | D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas | 99.65 | |
| d2rhca1 | 257 | beta-keto acyl carrier protein reductase {Streptom | 99.65 | |
| d1hxha_ | 253 | 3beta/17beta hydroxysteroid dehydrogenase {Comamon | 99.64 | |
| d1xg5a_ | 257 | Putative dehydrogenase ARPG836 (MGC4172) {Human (H | 99.62 | |
| d1yxma1 | 297 | Peroxisomal trans 2-enoyl CoA reductase {Human (Ho | 99.62 | |
| d1w6ua_ | 294 | 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H | 99.62 | |
| d1edoa_ | 244 | beta-keto acyl carrier protein reductase {Oil seed | 99.61 | |
| d1zmta1 | 252 | Halohydrin dehalogenase HheC {Agrobacterium tumefa | 99.61 | |
| d1sbya1 | 254 | Drosophila alcohol dehydrogenase {Fly (Drosophila | 99.59 | |
| d1ulua_ | 256 | Enoyl-ACP reductase {Thermus thermophilus [TaxId: | 99.59 | |
| d2a4ka1 | 241 | beta-keto acyl carrier protein reductase {Thermus | 99.59 | |
| d1yb1a_ | 244 | 17-beta-hydroxysteroid dehydrogenase type XI {Huma | 99.58 | |
| d1bdba_ | 276 | Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps | 99.57 | |
| d1spxa_ | 264 | Glucose dehydrogenase (5l265) {Nematode (Caenorhab | 99.57 | |
| d1xhla_ | 274 | Hypothetical protein F25D1.5 {Caenorhabditis elega | 99.57 | |
| d1h5qa_ | 260 | Mannitol dehydrogenase {Mushroom (Agaricus bisporu | 99.56 | |
| d2bd0a1 | 240 | Bacterial sepiapterin reductase {Chlorobium tepidu | 99.56 | |
| d1xkqa_ | 272 | Hypothetical protein R05D8.7 {Caenorhabditis elega | 99.55 | |
| d1g0oa_ | 272 | 1,3,8-trihydroxynaphtalene reductase (THNR, naphto | 99.55 | |
| d1ja9a_ | 259 | 1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl | 99.52 | |
| d1gz6a_ | 302 | (3R)-hydroxyacyl-CoA dehydrogenase domain of estra | 99.51 | |
| d2fr1a1 | 259 | Erythromycin synthase, eryAI, 1st ketoreductase mo | 99.49 | |
| d2o23a1 | 248 | Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho | 99.48 | |
| d1qsga_ | 258 | Enoyl-ACP reductase {Escherichia coli [TaxId: 562] | 99.45 | |
| d1dhra_ | 236 | Dihydropteridin reductase (pteridine reductase) {R | 99.44 | |
| d1oaaa_ | 259 | Sepiapterin reductase {Mouse (Mus musculus) [TaxId | 99.43 | |
| d2pd4a1 | 274 | Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2 | 99.43 | |
| d1yo6a1 | 250 | Putative carbonyl reductase sniffer {Caenorhabditi | 99.42 | |
| d1jtva_ | 285 | Human estrogenic 17beta-hydroxysteroid dehydrogena | 99.41 | |
| d1uaya_ | 241 | Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t | 99.4 | |
| d1ooea_ | 235 | Dihydropteridin reductase (pteridine reductase) {N | 99.39 | |
| d1xu9a_ | 269 | 11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom | 99.38 | |
| d1snya_ | 248 | Carbonyl reductase sniffer {Fruit fly (Drosophila | 99.36 | |
| d1e7wa_ | 284 | Dihydropteridin reductase (pteridine reductase) {L | 99.29 | |
| d1wmaa1 | 275 | Carbonyl reductase/20beta-hydroxysteroid dehydroge | 99.27 | |
| d2h7ma1 | 268 | Enoyl-ACP reductase {Mycobacterium tuberculosis, T | 99.26 | |
| d1mxha_ | 266 | Dihydropteridin reductase (pteridine reductase) {T | 99.25 | |
| d1fjha_ | 257 | 3-alpha-hydroxysteroid dehydrogenase {Comamonas te | 99.06 | |
| d1d7oa_ | 297 | Enoyl-ACP reductase {Oil seed rape (Brassica napus | 99.06 | |
| d1uh5a_ | 329 | Enoyl-ACP reductase {Malaria parasite (Plasmodium | 98.89 | |
| d1lssa_ | 132 | Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax | 98.76 | |
| d1luaa1 | 191 | Methylene-tetrahydromethanopterin dehydrogenase {M | 98.75 | |
| d2hmva1 | 134 | Ktn bsu222 {Bacillus subtilis [TaxId: 1423]} | 98.44 | |
| d1e5qa1 | 182 | Saccharopine reductase {Rice blast fungus (Magnapo | 98.2 | |
| d2f1ka2 | 165 | Prephenate dehydrogenase TyrA {Synechocystis sp. p | 98.0 | |
| d1yb5a2 | 174 | Quinone oxidoreductase {Human (Homo sapiens) [TaxI | 97.91 | |
| d1ks9a2 | 167 | Ketopantoate reductase PanE {Escherichia coli [Tax | 97.84 | |
| d1jaya_ | 212 | Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae | 97.73 | |
| d1bg6a2 | 184 | N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A | 97.7 | |
| d1mv8a2 | 202 | GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos | 97.7 | |
| d1id1a_ | 153 | Rck domain from putative potassium channel Kch {Es | 97.68 | |
| d1vpda2 | 161 | Hydroxyisobutyrate dehydrogenase {Salmonella typhi | 97.67 | |
| d1t4ba1 | 146 | Aspartate beta-semialdehyde dehydrogenase {Escheri | 97.61 | |
| d1ez4a1 | 146 | Lactate dehydrogenase {Lactobacillus pentosus [Tax | 97.6 | |
| d1v3va2 | 182 | Leukotriene b4 12-hydroxydehydrogenase/prostagland | 97.56 | |
| d1pqwa_ | 183 | Putative enoyl reductase domain of polyketide synt | 97.54 | |
| d3cuma2 | 162 | Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru | 97.52 | |
| d1kjqa2 | 111 | Glycinamide ribonucleotide transformylase PurT, N- | 97.49 | |
| d1gpja2 | 159 | Glutamyl tRNA-reductase middle domain {Archaeon Me | 97.45 | |
| d1pjqa1 | 113 | Siroheme synthase CysG, domain 1 {Salmonella typhi | 97.43 | |
| d2fy8a1 | 129 | Potassium channel-related protein MthK {Archaeon M | 97.42 | |
| d2pv7a2 | 152 | Prephenate dehydrogenase TyrA {Haemophilus influen | 97.39 | |
| d1iz0a2 | 171 | Quinone oxidoreductase {Thermus thermophilus [TaxI | 97.39 | |
| d1piwa2 | 168 | Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas | 97.38 | |
| d2g5ca2 | 171 | Prephenate dehydrogenase TyrA {Aquifex aeolicus [T | 97.36 | |
| d1i36a2 | 152 | Conserved hypothetical protein MTH1747 {Archaeon M | 97.35 | |
| d1o8ca2 | 77 | Hypothetical protein YhdH {Escherichia coli [TaxId | 97.32 | |
| d1e3ja2 | 170 | Ketose reductase (sorbitol dehydrogenase) {Silverl | 97.31 | |
| d1xa0a2 | 176 | B. subtilis YhfP homologue {Bacillus stearothermop | 97.31 | |
| d1yqga2 | 152 | Pyrroline-5-carboxylate reductase ProC {Neisseria | 97.29 | |
| d2jfga1 | 93 | UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase | 97.24 | |
| d1n1ea2 | 189 | Glycerol-3- phosphate dehydrogenase {Trypanosome ( | 97.23 | |
| d1o89a2 | 177 | Hypothetical protein YhdH {Escherichia coli [TaxId | 97.21 | |
| d1tt7a2 | 167 | Hypothetical protein YhfP {Bacillus subtilis [TaxI | 97.2 | |
| d1uufa2 | 168 | Hypothetical protein YahK {Escherichia coli [TaxId | 97.19 | |
| d2ahra2 | 152 | Pyrroline-5-carboxylate reductase ProC {Streptococ | 97.18 | |
| d1mlda1 | 144 | Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982 | 97.17 | |
| d2pgda2 | 176 | 6-phosphogluconate dehydrogenase {Sheep (Ovis orie | 97.12 | |
| d1vj0a2 | 182 | Hypothetical protein TM0436 {Thermotoga maritima [ | 97.09 | |
| d1ldna1 | 148 | Lactate dehydrogenase {Bacillus stearothermophilus | 97.07 | |
| d1mb4a1 | 147 | Aspartate beta-semialdehyde dehydrogenase {Vibrio | 97.07 | |
| d1f0ya2 | 192 | Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum | 97.06 | |
| d1qora2 | 179 | Quinone oxidoreductase {Escherichia coli [TaxId: 5 | 97.04 | |
| d1pgja2 | 178 | 6-phosphogluconate dehydrogenase {Trypanosoma bruc | 97.04 | |
| d1nyta1 | 170 | Shikimate 5-dehydrogenase AroE {Escherichia coli [ | 97.04 | |
| d2hjsa1 | 144 | Usg-1 protein homolog PA3116 {Pseudomonas aerugino | 97.04 | |
| d1p3da1 | 96 | UDP-N-acetylmuramate-alanine ligase MurC {Haemophi | 97.02 | |
| d1pl8a2 | 171 | Ketose reductase (sorbitol dehydrogenase) {Human ( | 97.02 | |
| d1txga2 | 180 | Glycerol-3- phosphate dehydrogenase {Archaeoglobus | 96.96 | |
| d1vi2a1 | 182 | Putative shikimate dehydrogenase YdiB {Escherichia | 96.95 | |
| d1hyea1 | 145 | MJ0490, lactate/malate dehydrogenase {Archaeon Met | 96.94 | |
| d1guza1 | 142 | Malate dehydrogenase {Chlorobium vibrioforme [TaxI | 96.87 | |
| d1u7za_ | 223 | Coenzyme A biosynthesis bifunctional protein CoaBC | 96.83 | |
| d1jqba2 | 174 | Bacterial secondary alcohol dehydrogenase {Clostri | 96.81 | |
| d1pzga1 | 154 | Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5 | 96.73 | |
| d1dlja2 | 196 | UDP-glucose dehydrogenase (UDPGDH) {Streptococcus | 96.7 | |
| d1a5za1 | 140 | Lactate dehydrogenase {Thermotoga maritima [TaxId: | 96.7 | |
| d1d7ya2 | 121 | NADH-dependent ferredoxin reductase, BphA4 {Pseudo | 96.65 | |
| d2cmda1 | 145 | Malate dehydrogenase {Escherichia coli [TaxId: 562 | 96.64 | |
| d3etja2 | 78 | N5-carboxyaminoimidazole ribonucleotide synthetase | 96.63 | |
| d1ebda2 | 117 | Dihydrolipoamide dehydrogenase {Bacillus stearothe | 96.59 | |
| d1i0za1 | 160 | Lactate dehydrogenase {Human (Homo sapiens), heart | 96.58 | |
| d1p77a1 | 171 | Shikimate 5-dehydrogenase AroE {Haemophilus influe | 96.57 | |
| d1llua2 | 166 | Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax | 96.53 | |
| d1wdka3 | 186 | Fatty oxidation complex alpha subunit, middle doma | 96.52 | |
| d1ojua1 | 142 | Malate dehydrogenase {Archaeon Archaeoglobus fulgi | 96.5 | |
| d1llda1 | 143 | Lactate dehydrogenase {Bifidobacterium longum, str | 96.5 | |
| d1hyha1 | 146 | L-2-hydroxyisocapronate dehydrogenase, L-HICDH {La | 96.46 | |
| d1nhpa2 | 123 | NADH peroxidase {Enterococcus faecalis [TaxId: 135 | 96.45 | |
| d1f8fa2 | 174 | Benzyl alcohol dehydrogenase {Acinetobacter calcoa | 96.43 | |
| d1v59a2 | 122 | Dihydrolipoamide dehydrogenase {Baker's yeast (Sac | 96.4 | |
| d2ldxa1 | 159 | Lactate dehydrogenase {Mouse (Mus musculus) [TaxId | 96.39 | |
| d1gesa2 | 116 | Glutathione reductase {Escherichia coli [TaxId: 56 | 96.38 | |
| d1onfa2 | 117 | Glutathione reductase {Plasmodium falciparum [TaxI | 96.37 | |
| d1y6ja1 | 142 | Lactate dehydrogenase {Clostridium thermocellum [T | 96.36 | |
| d1li4a1 | 163 | S-adenosylhomocystein hydrolase {Human (Homo sapie | 96.35 | |
| d1vj1a2 | 187 | Putative zinc-binding alcohol dehydrogenase {Mouse | 96.34 | |
| d3lada2 | 119 | Dihydrolipoamide dehydrogenase {Azotobacter vinela | 96.34 | |
| d1t2da1 | 150 | Lactate dehydrogenase {Malaria parasite (Plasmodiu | 96.27 | |
| d1pjca1 | 168 | L-alanine dehydrogenase {Phormidium lapideum [TaxI | 96.26 | |
| d1xhca2 | 122 | NADH oxidase /nitrite reductase {Pyrococcus furios | 96.23 | |
| d1uxja1 | 142 | Malate dehydrogenase {Chloroflexus aurantiacus [Ta | 96.22 | |
| d1vm6a3 | 128 | Dihydrodipicolinate reductase {Thermotoga maritima | 96.2 | |
| d1q1ra2 | 133 | Putidaredoxin reductase {Pseudomonas putida [TaxId | 96.17 | |
| d1lvla2 | 115 | Dihydrolipoamide dehydrogenase {Pseudomonas putida | 96.16 | |
| d1npya1 | 167 | Shikimate 5-dehydrogenase-like protein HI0607 {Hae | 96.16 | |
| d3grsa2 | 125 | Glutathione reductase {Human (Homo sapiens) [TaxId | 96.15 | |
| d1c0pa1 | 268 | D-aminoacid oxidase, N-terminal domain {Rhodotorul | 96.09 | |
| d1h6va2 | 122 | Mammalian thioredoxin reductase {Rat (Rattus norve | 96.07 | |
| d2csua1 | 129 | Acetate-CoA ligase alpha chain, AcdA, N-terminal d | 95.95 | |
| d1rjwa2 | 168 | Alcohol dehydrogenase {Bacillus stearothermophilus | 95.94 | |
| d1j6ua1 | 89 | UDP-N-acetylmuramate-alanine ligase MurC {Thermoto | 95.93 | |
| d1qp8a1 | 181 | Putative formate dehydrogenase {Archaeon Pyrobacul | 95.91 | |
| d1ps9a3 | 179 | 2,4-dienoyl-CoA reductase, middle domain {Escheric | 95.86 | |
| d1jvba2 | 170 | Alcohol dehydrogenase {Archaeon Sulfolobus solfata | 95.84 | |
| d1l7da1 | 183 | Nicotinamide nucleotide transhydrogenase dI compon | 95.77 | |
| d1yovb1 | 426 | UBA3 {Human (Homo sapiens) [TaxId: 9606]} | 95.76 | |
| d2g17a1 | 179 | N-acetyl-gamma-glutamyl-phosphate reductase ArgC { | 95.71 | |
| d1jw9b_ | 247 | Molybdenum cofactor biosynthesis protein MoeB {Esc | 95.71 | |
| d1mo9a2 | 121 | NADH-dependent 2-ketopropyl coenzyme M oxidoreduct | 95.69 | |
| d1c1da1 | 201 | Phenylalanine dehydrogenase {Rhodococcus sp., M4 [ | 95.63 | |
| d1dxla2 | 123 | Dihydrolipoamide dehydrogenase {Garden pea (Pisum | 95.63 | |
| d1ojta2 | 125 | Dihydrolipoamide dehydrogenase {Neisseria meningit | 95.61 | |
| d2voua1 | 265 | Dihydroxypyridine hydroxylase DhpH {Arthrobacter n | 95.59 | |
| d1o6za1 | 142 | Malate dehydrogenase {Archaeon Haloarcula marismor | 95.58 | |
| d1kola2 | 195 | Formaldehyde dehydrogenase {Pseudomonas putida [Ta | 95.57 | |
| d1y7ta1 | 154 | Malate dehydrogenase {Thermus thermophilus [TaxId: | 95.48 | |
| d1gtea4 | 196 | Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su | 95.45 | |
| d1nvta1 | 177 | Shikimate 5-dehydrogenase AroE {Archaeon Methanoco | 95.44 | |
| d1e3ia2 | 174 | Alcohol dehydrogenase {Mouse (Mus musculus), class | 95.41 | |
| d1kyqa1 | 150 | Bifunctional dehydrogenase/ferrochelatase Met8p, N | 95.41 | |
| d2jhfa2 | 176 | Alcohol dehydrogenase {Horse (Equus caballus) [Tax | 95.4 | |
| d1dxya1 | 199 | D-2-hydroxyisocaproate dehydrogenase {Lactobacillu | 95.39 | |
| d1j4aa1 | 197 | D-lactate dehydrogenase {Lactobacillus helveticus | 95.39 | |
| d2bi7a1 | 314 | UDP-galactopyranose mutase, N-terminal domain {Kle | 95.32 | |
| d2dt5a2 | 126 | Transcriptional repressor Rex, C-terminal domain { | 95.24 | |
| d1vkna1 | 176 | N-acetyl-gamma-glutamyl-phosphate reductase ArgC { | 95.24 | |
| d2cvoa1 | 183 | Putative semialdehyde dehydrogenase {Rice (Oryza s | 95.23 | |
| d1d1ta2 | 176 | Alcohol dehydrogenase {Human (Homo sapiens), diffe | 95.1 | |
| d1h2ba2 | 172 | Alcohol dehydrogenase {Archaeon Aeropyrum pernix [ | 95.1 | |
| d1ygya1 | 184 | Phosphoglycerate dehydrogenase {Mycobacterium tube | 95.09 | |
| d1sc6a1 | 188 | Phosphoglycerate dehydrogenase {Escherichia coli [ | 95.09 | |
| d5mdha1 | 154 | Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982 | 95.08 | |
| d1pjza_ | 201 | Thiopurine S-methyltransferase {Pseudomonas syring | 95.07 | |
| d2gz1a1 | 154 | Aspartate beta-semialdehyde dehydrogenase {Strepto | 95.04 | |
| d1ryia1 | 276 | Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]} | 94.96 | |
| d7mdha1 | 175 | Malate dehydrogenase {Sorghum (Sorghum vulgare), c | 94.88 | |
| d1v8ba1 | 163 | S-adenosylhomocystein hydrolase {Plasmodium falcip | 94.87 | |
| d2ivda1 | 347 | Protoporphyrinogen oxidase {Myxococcus xanthus [Ta | 94.83 | |
| d1f06a1 | 170 | Diaminopimelic acid dehydrogenase (DAPDH) {Coryneb | 94.8 | |
| d1a9xa4 | 121 | Carbamoyl phosphate synthetase (CPS), large subuni | 94.77 | |
| d2naca1 | 188 | Formate dehydrogenase {Pseudomonas sp., strain 101 | 94.74 | |
| d1seza1 | 373 | Protoporphyrinogen oxidase {Tobacco (Nicotiana tab | 94.74 | |
| d1fcda1 | 186 | Flavocytochrome c sulfide dehydrogenase, FCSD, fla | 94.73 | |
| d2iida1 | 370 | L-aminoacid oxidase {Malayan pit viper (Calloselas | 94.55 | |
| d2fzwa2 | 176 | Alcohol dehydrogenase {Human (Homo sapiens), diffe | 94.44 | |
| d1b0aa1 | 166 | Methylenetetrahydrofolate dehydrogenase/cyclohydro | 94.38 | |
| d1djqa3 | 233 | Trimethylamine dehydrogenase, middle domain {Methy | 94.37 | |
| d2bzga1 | 229 | Thiopurine S-methyltransferase {Human (Homo sapien | 94.32 | |
| d2gv8a2 | 107 | Flavin-dependent monoxygenase SPBP16F5.08c {Schizo | 94.28 | |
| d1k0ia1 | 292 | p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas a | 94.28 | |
| d1gdha1 | 191 | D-glycerate dehydrogenase {Hyphomicrobium methylov | 94.23 | |
| d2czca2 | 172 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 94.16 | |
| d1djqa2 | 156 | Trimethylamine dehydrogenase, C-terminal domain {M | 93.97 | |
| d1yova1 | 529 | Amyloid beta precursor protein-binding protein 1, | 93.89 | |
| d1mx3a1 | 193 | Transcription corepressor CtbP {Human (Homo sapien | 93.87 | |
| d2gv8a1 | 335 | Flavin-dependent monoxygenase SPBP16F5.08c {Schizo | 93.86 | |
| d1nvmb1 | 157 | Acetaldehyde dehydrogenase (acylating) {Pseudomona | 93.86 | |
| d1p0fa2 | 174 | Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: | 93.84 | |
| d1q1ra1 | 185 | Putidaredoxin reductase {Pseudomonas putida [TaxId | 93.79 | |
| d1nhpa1 | 198 | NADH peroxidase {Enterococcus faecalis [TaxId: 135 | 93.76 | |
| d1a9xa3 | 127 | Carbamoyl phosphate synthetase (CPS), large subuni | 93.71 | |
| d1i8ta1 | 298 | UDP-galactopyranose mutase, N-terminal domain {Esc | 93.71 | |
| d2bcgg1 | 297 | Guanine nucleotide dissociation inhibitor, GDI {Ba | 93.66 | |
| d1yl7a1 | 135 | Dihydrodipicolinate reductase {Mycobacterium tuber | 93.65 | |
| d1aoga2 | 117 | Trypanothione reductase {Trypanosoma cruzi [TaxId: | 93.59 | |
| d1kifa1 | 246 | D-aminoacid oxidase, N-terminal domain {Pig (Sus s | 93.52 | |
| d3c96a1 | 288 | Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId: | 93.24 | |
| d1d7ya1 | 183 | NADH-dependent ferredoxin reductase, BphA4 {Pseudo | 93.19 | |
| d1pj5a2 | 305 | N,N-dimethylglycine oxidase {Arthrobacter globifor | 93.18 | |
| d2gf3a1 | 281 | Sarcosine oxidase {Bacillus sp., strain b0618 [Tax | 93.1 | |
| d1cdoa2 | 175 | Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI | 92.9 | |
| d1feca2 | 117 | Trypanothione reductase {Crithidia fasciculata [Ta | 92.82 | |
| d1diha1 | 162 | Dihydrodipicolinate reductase {Escherichia coli [T | 92.62 | |
| d1a4ia1 | 170 | Methylenetetrahydrofolate dehydrogenase/cyclohydro | 92.58 | |
| d2dw4a2 | 449 | Lysine-specific histone demethylase 1, LSD1 {Human | 92.58 | |
| d1q0qa2 | 151 | 1-deoxy-D-xylulose-5-phosphate reductoisomerase {E | 92.5 | |
| d1xhca1 | 167 | NADH oxidase /nitrite reductase {Pyrococcus furios | 92.47 | |
| d1leha1 | 230 | Leucine dehydrogenase {Bacillus sphaericus [TaxId: | 92.46 | |
| d2d59a1 | 139 | Hypothetical protein PH1109 {Pyrococcus horikoshii | 92.41 | |
| d1y81a1 | 116 | Hypothetical protein PF0725 {Pyrococcus furiosus [ | 92.4 | |
| d1m6ia2 | 137 | Apoptosis-inducing factor (AIF) {Human (Homo sapie | 92.33 | |
| d1v9la1 | 242 | Glutamate dehydrogenase {Pyrobaculum islandicum [T | 92.07 | |
| d1obba1 | 171 | Alpha-glucosidase AglA {Thermotoga maritima [TaxId | 92.04 | |
| d1b5qa1 | 347 | Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]} | 91.9 | |
| d2cvza2 | 156 | Hydroxyisobutyrate dehydrogenase {Thermus thermoph | 91.63 | |
| d1d5ta1 | 336 | Guanine nucleotide dissociation inhibitor, GDI {Co | 91.58 | |
| d1hwxa1 | 293 | Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: | 91.39 | |
| d1vkza2 | 90 | Glycinamide ribonucleotide synthetase (GAR-syn), N | 91.38 | |
| d1n4wa1 | 367 | Cholesterol oxidase of GMC family {Streptomyces sp | 91.28 | |
| d1j5pa4 | 132 | Hypothetical protein TM1643 {Thermotoga maritima [ | 90.82 | |
| d1w4xa1 | 298 | Phenylacetone monooxygenase {Thermobifida fusca [T | 90.81 | |
| d1gsoa2 | 105 | Glycinamide ribonucleotide synthetase (GAR-syn), N | 90.75 | |
| d1r0ka2 | 150 | 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Z | 90.57 | |
| d1nt2a_ | 209 | Fibrillarin homologue {Archaeon Archaeoglobus fulg | 90.42 | |
| d1bgva1 | 255 | Glutamate dehydrogenase {Clostridium symbiosum [Ta | 90.22 | |
| d2v5za1 | 383 | Monoamine oxidase B {Human (Homo sapiens) [TaxId: | 90.08 | |
| d2bw0a2 | 203 | 10-formyltetrahydrofolate dehydrogenase domain 1 { | 89.94 | |
| d2i0za1 | 251 | Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396] | 89.62 | |
| d2i76a2 | 153 | Hypothetical protein TM1727 {Thermotoga maritima [ | 89.39 | |
| d1cjca2 | 230 | Adrenodoxin reductase of mitochondrial p450 system | 89.28 | |
| d1gu7a2 | 189 | 2,4-dienoyl-CoA reductase {Yeast (Candida tropical | 89.22 | |
| d1gtea3 | 153 | Dihydropyrimidine dehydrogenase, domain 3 {Pig (Su | 89.18 | |
| d1xeaa1 | 167 | Putative oxidoreductase VCA1048 {Vibrio cholerae [ | 89.12 | |
| d1vjta1 | 193 | Putative alpha-glucosidase TM0752 {Thermotoga mari | 88.55 | |
| d2blna2 | 203 | Polymyxin resistance protein ArnA, N-terminal doma | 88.47 | |
| d1fmta2 | 206 | Methionyl-tRNAfmet formyltransferase {Escherichia | 88.37 | |
| d1edza1 | 171 | Methylenetetrahydrofolate dehydrogenase/cyclohydro | 88.37 | |
| d1up7a1 | 162 | 6-phospho-beta-glucosidase {Thermotoga maritima [T | 88.31 | |
| d3coxa1 | 370 | Cholesterol oxidase of GMC family {Brevibacterium | 88.28 | |
| d2f5va1 | 379 | Pyranose 2-oxidase {White-rot fungus (Peniophora s | 88.23 | |
| d1y8ca_ | 246 | Putative methyltransferase CAC2371 {Clostridium ac | 87.99 | |
| d1f0ka_ | 351 | Peptidoglycan biosynthesis glycosyltransferase Mur | 87.67 | |
| d1g8sa_ | 230 | Fibrillarin homologue {Archaeon Methanococcus jann | 87.55 | |
| d2i6ga1 | 198 | Putative methyltransferase TehB {Salmonella typhim | 87.28 | |
| d1np3a2 | 182 | Class I ketol-acid reductoisomerase (KARI) {Pseudo | 87.1 | |
| d1y0pa2 | 308 | Flavocytochrome c3 (respiratory fumarate reductase | 86.85 | |
| d1g8aa_ | 227 | Fibrillarin homologue {Archaeon Pyrococcus horikos | 86.69 | |
| d1pn0a1 | 360 | Phenol hydroxylase {Soil-living yeast (Trichosporo | 86.62 | |
| d1r18a_ | 223 | Protein-L-isoaspartyl O-methyltransferase {Fruit f | 86.42 | |
| d1gtma1 | 239 | Glutamate dehydrogenase {Archaeon Pyrococcus furio | 86.22 | |
| d2gqfa1 | 253 | Hypothetical protein HI0933 {Haemophilus influenza | 86.05 | |
| d1gesa1 | 217 | Glutathione reductase {Escherichia coli [TaxId: 56 | 85.58 | |
| d1b7go1 | 178 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 85.56 | |
| d1lqta2 | 239 | Ferredoxin:NADP reductase FprA {Mycobacterium tube | 85.5 | |
| d1tlta1 | 164 | Virulence factor MviM {Escherichia coli [TaxId: 56 | 85.48 | |
| d1rp0a1 | 278 | Thiazole biosynthetic enzyme Thi4 {Thale cress(Ara | 84.94 | |
| d1d4ca2 | 322 | Flavocytochrome c3 (respiratory fumarate reductase | 84.2 | |
| d1iuka_ | 136 | Hypothetical protein TT1466 {Thermus thermophilus | 84.17 | |
| d1w4xa2 | 235 | Phenylacetone monooxygenase {Thermobifida fusca [T | 84.11 | |
| d1iira_ | 401 | UDP-glucosyltransferase GtfB {Amycolatopsis orient | 84.02 | |
| d1m6ia1 | 213 | Apoptosis-inducing factor (AIF) {Human (Homo sapie | 83.99 | |
| d1ydwa1 | 184 | Probable oxidoreductase At4g09670 {Thale cress (Ar | 83.94 | |
| d1b26a1 | 234 | Glutamate dehydrogenase {Thermotoga maritima [TaxI | 83.9 | |
| d1wzna1 | 251 | Hypothetical methyltransferase PH1305 {Archaeon Py | 83.89 | |
| d1byia_ | 224 | Dethiobiotin synthetase {Escherichia coli [TaxId: | 83.34 | |
| d1dxla1 | 221 | Dihydrolipoamide dehydrogenase {Garden pea (Pisum | 82.64 | |
| d1jg1a_ | 215 | Protein-L-isoaspartyl O-methyltransferase {Archaeo | 82.64 | |
| d1jzta_ | 243 | Hypothetical protein YNL200c (YNU0_YEAST) {Baker's | 82.21 | |
| d2bisa1 | 437 | Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI | 82.01 | |
| d1kdga1 | 360 | Flavoprotein domain of flavocytochrome cellobiose | 81.99 | |
| d1s6ya1 | 169 | 6-phospho-beta-glucosidase {Bacillus stearothermop | 81.6 | |
| d1dl5a1 | 213 | Protein-L-isoaspartyl O-methyltransferase {Thermot | 81.45 | |
| d1kpga_ | 285 | CmaA1 {Mycobacterium tuberculosis [TaxId: 1773]} | 81.21 | |
| d1uwva2 | 358 | rRNA (Uracil-5-)-methyltransferase RumA, catalytic | 80.97 | |
| d1mvoa_ | 121 | PhoP receiver domain {Bacillus subtilis [TaxId: 14 | 80.96 | |
| d1v59a1 | 233 | Dihydrolipoamide dehydrogenase {Baker's yeast (Sac | 80.15 |
| >d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=2.2e-44 Score=327.50 Aligned_cols=300 Identities=13% Similarity=0.034 Sum_probs=222.8
Q ss_pred CeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchh-----hhh------hhhCCceEEEccCChhhH--Hhhc--cCce
Q 017914 60 NRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMK-----KKE------LEQSGFDVHLFNANETAL--MILT--TLKN 123 (364)
Q Consensus 60 ~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~-----~~~------l~~~~~~~~~~D~~~~~~--~~~~--~~d~ 123 (364)
|.||||| |||||++|+++|+++||+|++++|.... ... ....+++++.+|++|.+. ..+. .+|.
T Consensus 2 K~vLITGatGfiGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~ 81 (357)
T d1db3a_ 2 KVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREVQPDE 81 (357)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHHCCSE
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHHhhhhhcCCCeEEEEeecCCHHHHHHHHhccCCCE
Confidence 7899999 9999999999999999999999995431 111 122578999999999774 5555 4599
Q ss_pred eeEEEEecCCCCCCCChhh------hHHHHHHHHhhcCCc---cEEEEEccceeecCCCCccccCCCCCCCCChhHHHHH
Q 017914 124 YTHLLVSIPPLEGTGDPML------KHGELLRSTLMNGHL---QWLGYLSSTGVYGHSGGAWVDEDYPANPTTELGRLRL 194 (364)
Q Consensus 124 v~~~~~~~~~~~~~~~~~~------~~~~~l~~a~~~~~~---~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~~sK~ 194 (364)
|+|+++......+..++.. ..+.|++++++..++ +||||+||..|||.....+++|+++..|.++|+.+|+
T Consensus 82 v~h~aa~~~~~~~~~~~~~~~~~Nv~gt~nllea~~~~~~~~~~r~i~~SS~~vYG~~~~~~~~E~~~~~P~~~Y~~sK~ 161 (357)
T d1db3a_ 82 VYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAKL 161 (357)
T ss_dssp EEECCCCCTTTTTTSCHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGGTTCCSSSBCTTSCCCCCSHHHHHHH
T ss_pred EEEeecccccchhhhCHHHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEEEchhhhCCCCCCCcCCCCCCCCCChHHHHHH
Confidence 9999998776665555433 445678888876544 4799999999999888888999999999999999999
Q ss_pred HHHHHHHHhhhhcCCcEEEEEecceecCCCCh------HHHHHHhcCc--ccccccccCCcccccccHHHHHHHHHHHcc
Q 017914 195 SAEKGWLNLGRDLGISAQVFRLGGIYGPGRSS------VDTIIKQLPL--SEGQKMRRARQYTSRIHVDDICQVLSASID 266 (364)
Q Consensus 195 ~~E~~~~~~~~~~~~~~~ilRp~~v~g~~~~~------~~~~~~~~~~--~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~ 266 (364)
++|.+++.++++++++++++||+++||+..+. +..++..... ......+++++.++|+|++|+|++++.+++
T Consensus 162 ~~E~~~~~~~~~~~l~~~ilR~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~~~~~r~~~~v~D~~~a~~~~~~ 241 (357)
T d1db3a_ 162 YAYWITVNYRESYGMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAKDYVKMQWMMLQ 241 (357)
T ss_dssp HHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCCCEEESCTTCEECCEEHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHhCCCEEEEEeccccCCCCCcCCCchHHHHHHHHHHhCCCceEEECCCCeeecceeechHHHHHHHHHh
Confidence 99999999999999999999999999986431 2222221111 112234778899999999999999999998
Q ss_pred CCCCCceEEEeCCCCCCHHHHHHHHHHHhcCCCCCcc-cC---------CCCCCCCCC----------CccCCCCCCCeE
Q 017914 267 KPSAWNVYNVVDDDPAPREEVFAYAWDLVEKKWPGLL-KH---------RKPRENTES----------SNEKGSSRGEKR 326 (364)
Q Consensus 267 ~~~~g~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~-~~---------~~~~~~~~~----------~~~~~~~~~~~~ 326 (364)
+. .+++||+++|+.+|++|+++.+.+.+|...+... .. ......... ..+.+.......
T Consensus 242 ~~-~~~~yni~sg~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 320 (357)
T d1db3a_ 242 QE-QPEDFVIATGVQYSVRQFVEMAAAQLGIKLRFEGTGVEEKGIVVSVTGHDAPGVKPGDVIIAVDPRYFRPAEVETLL 320 (357)
T ss_dssp SS-SCCCEEECCCCCEEHHHHHHHHHHTTTEEEEEESCGGGCEEEEEEECSSSCTTCCTTCEEEEECGGGCCCCC-CCCC
T ss_pred CC-CCCeEEECCCCceehHHHHHHHHHHhCCccccccccccccchhhhhhcccccccccCceeEeeccccCCCccccccc
Confidence 75 4579999999999999999999999985421100 00 000000000 001112233456
Q ss_pred EEchhHHHhcCcccCCCCHHHHHHHHHHHhcccCC
Q 017914 327 VSNVRMKKELGVRLWHPSYKSGLQSIINQMDQPYQ 361 (364)
Q Consensus 327 ~d~~k~~~~lG~~p~~~~~~e~l~~~~~~~~~~~~ 361 (364)
+|++|++++|||+|++ +|+|+|++++++..+..+
T Consensus 321 ~d~skakk~LGw~P~~-sl~egI~~~I~~~l~~~k 354 (357)
T d1db3a_ 321 GDPTKAHEKLGWKPEI-TLREMVSEMVANDLEAAK 354 (357)
T ss_dssp BCCHHHHHHHCCCCCS-CHHHHHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHCCCcCC-CHHHHHHHHHHHHHHHHh
Confidence 7999999999999999 899999999876555443
|
| >d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptomyces venezuelae [TaxId: 54571]
Probab=100.00 E-value=1.3e-44 Score=324.78 Aligned_cols=291 Identities=14% Similarity=0.197 Sum_probs=229.4
Q ss_pred CeEEEEc-CChhhHHHHHHHHhCCCEE------EEEEeCc-----hhhhhh-hhCCceEEEccCChhhH--HhhccCcee
Q 017914 60 NRMLILG-MGFVGRIFAEKIKNQGWVV------SGTCTNV-----MKKKEL-EQSGFDVHLFNANETAL--MILTTLKNY 124 (364)
Q Consensus 60 ~~vlVtG-tG~iG~~l~~~L~~~g~~V------~~~~r~~-----~~~~~l-~~~~~~~~~~D~~~~~~--~~~~~~d~v 124 (364)
||||||| |||||++|+++|+++||+| +++++.. .....+ ...++.++.+|..+... ......|.|
T Consensus 1 MkIlItG~tGfIG~~l~~~L~~~g~~v~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~v 80 (322)
T d1r6da_ 1 MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFVHGDIRDAGLLARELRGVDAI 80 (322)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGGGGGTTCTTEEEEECCTTCHHHHHHHTTTCCEE
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCCccCCceEEEEeCCCccccHhHhhhhhcCCCeEEEEeccccchhhhccccccceE
Confidence 7899999 9999999999999999854 4444321 111111 22578999999999764 566888999
Q ss_pred eEEEEecCCCCCCCC------hhhhHHHHHHHHhhcCCccEEEEEccceeecCCCCccccCCCCCCCCChhHHHHHHHHH
Q 017914 125 THLLVSIPPLEGTGD------PMLKHGELLRSTLMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANPTTELGRLRLSAEK 198 (364)
Q Consensus 125 ~~~~~~~~~~~~~~~------~~~~~~~~l~~a~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~~sK~~~E~ 198 (364)
+|+|+.........+ .....+.|+++++.+.++++|||+||..+||.....+++|+++..|.+.|+.+|..+|.
T Consensus 81 i~~a~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~I~~Ss~~~yg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~ 160 (322)
T d1r6da_ 81 VHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAGVGRVVHVSTNQVYGSIDSGSWTESSPLEPNSPYAASKAGSDL 160 (322)
T ss_dssp EECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEEGGGGCCCSSSCBCTTSCCCCCSHHHHHHHHHHH
T ss_pred EeecccccccccccchHHHhhhhHHHHHHHHHHHHHcCCceEEEeecceeecCCCCCCCCCCCCCCCCCHHHHHHHHHHH
Confidence 999865332211111 22344578888998889999999999999999888899999999999999999999999
Q ss_pred HHHHhhhhcCCcEEEEEecceecCCCC---hHHHHHHhcCccc-ccccccCCcccccccHHHHHHHHHHHccCCCCCceE
Q 017914 199 GWLNLGRDLGISAQVFRLGGIYGPGRS---SVDTIIKQLPLSE-GQKMRRARQYTSRIHVDDICQVLSASIDKPSAWNVY 274 (364)
Q Consensus 199 ~~~~~~~~~~~~~~ilRp~~v~g~~~~---~~~~~~~~~~~~~-~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~~g~~~ 274 (364)
+++.+.++++++++++||+.+||+++. .+..++....... ....++|++.++|+|++|+|++++.+++++..|++|
T Consensus 161 ~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~i~~~i~~~~~~~~i~v~~~g~~~r~~i~v~D~a~ai~~~~~~~~~~~~~ 240 (322)
T d1r6da_ 161 VARAYHRTYGLDVRITRCCNNYGPYQHPEKLIPLFVTNLLDGGTLPLYGDGANVREWVHTDDHCRGIALVLAGGRAGEIY 240 (322)
T ss_dssp HHHHHHHHHCCCEEEEEECEEECTTCCTTSHHHHHHHHHHTTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHHCCTTCEE
T ss_pred HHHHHHHHhCCCEEEEEeeeEECcCCCcCcHHHHHHHHHHcCCCcEEecCCCeEEccEEHHHHHHHHHHHHhCCCCCCee
Confidence 999999999999999999999998753 3555544321111 123478899999999999999999999998889999
Q ss_pred EEeCCCCCCHHHHHHHHHHHhcCCCCCcccCCCCCCCCCCCccCCCCCCCeEEEchhHHHhcCcccCCCCHHHHHHHHHH
Q 017914 275 NVVDDDPAPREEVFAYAWDLVEKKWPGLLKHRKPRENTESSNEKGSSRGEKRVSNVRMKKELGVRLWHPSYKSGLQSIIN 354 (364)
Q Consensus 275 ~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~e~l~~~~~ 354 (364)
|+++++.+++.|+++.+.+.+|.+.+..... . ..........+|++|+++.|||+|++ +++|+|+++++
T Consensus 241 ni~~~~~~s~~e~~~~i~~~~~~~~~~~~~~-~---------~~~~~~~~~~~d~~k~~~~lg~~p~~-~~eegI~~~i~ 309 (322)
T d1r6da_ 241 HIGGGLELTNRELTGILLDSLGADWSSVRKV-A---------DRKGHDLRYSLDGGKIERELGYRPQV-SFADGLARTVR 309 (322)
T ss_dssp EECCCCEEEHHHHHHHHHHHHTCCGGGEEEE-C---------CCTTCCCBCCBCCHHHHHHHCCCCCS-CHHHHHHHHHH
T ss_pred EEeecccchhHHHHHHHHHHhCCCccceeec-C---------CCCCCCceeeeCHHHHHHHHCCCCCC-CHHHHHHHHHH
Confidence 9999999999999999999999874322111 0 01123334568999999999999999 89999999999
Q ss_pred HhcccCC
Q 017914 355 QMDQPYQ 361 (364)
Q Consensus 355 ~~~~~~~ 361 (364)
|+++|.+
T Consensus 310 w~~~n~~ 316 (322)
T d1r6da_ 310 WYRENRG 316 (322)
T ss_dssp HHHHCHH
T ss_pred HHHHhHH
Confidence 9998754
|
| >d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-glucuronate decarboxylase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.6e-44 Score=322.38 Aligned_cols=286 Identities=19% Similarity=0.179 Sum_probs=216.7
Q ss_pred CCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCch-hhhhhh----hCCceEEEccCChhhHHhhccCceeeEEEEecC
Q 017914 59 PNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVM-KKKELE----QSGFDVHLFNANETALMILTTLKNYTHLLVSIP 132 (364)
Q Consensus 59 ~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~-~~~~l~----~~~~~~~~~D~~~~~~~~~~~~d~v~~~~~~~~ 132 (364)
+||||||| +||||++|+++|+++|++|++++|... ....+. ...+++...|+.+ ..+.++|.|+|+|+...
T Consensus 1 kKKIlVtG~sGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~d~~~~~~~~---~~~~~~d~VihlAa~~~ 77 (312)
T d2b69a1 1 RKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVE---PLYIEVDQIYHLASPAS 77 (312)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTGGGTTCTTEEEEECCTTS---CCCCCCSEEEECCSCCS
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCCcCCHHHHHHhcCCCceEEEehHHHH---HHHcCCCEEEECcccCC
Confidence 47999999 999999999999999999999987322 222221 1233444444433 44568999999998654
Q ss_pred CCCCCCChhh------hHHHHHHHHhhcCCccEEEEEccceeecCCCCccccCC-----CCCCCCChhHHHHHHHHHHHH
Q 017914 133 PLEGTGDPML------KHGELLRSTLMNGHLQWLGYLSSTGVYGHSGGAWVDED-----YPANPTTELGRLRLSAEKGWL 201 (364)
Q Consensus 133 ~~~~~~~~~~------~~~~~l~~a~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~-----~~~~~~~~Y~~sK~~~E~~~~ 201 (364)
...+..++.. ....|++++++..++ ++||+||..||+.....+++|+ ++..|.++|+.+|.++|.+++
T Consensus 78 ~~~~~~~~~~~~~~Nv~g~~~ll~~~~~~~~-k~I~~SS~~vy~~~~~~~~~e~~~~~~~~~~p~~~Y~~sK~~~E~~~~ 156 (312)
T d2b69a1 78 PPNYMYNPIKTLKTNTIGTLNMLGLAKRVGA-RLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCY 156 (312)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHHHHHHHTC-EEEEEEEGGGGBSCSSSSBCTTCCCBCCSSSTTHHHHHHHHHHHHHHH
T ss_pred chhHHhCHHHHHHHHHHHHHHHHHHHHHcCC-cEEEEEChheecCCCCCCCCccccCCCCCCCCccHHHHHHHHHHHHHH
Confidence 3222233322 345688888888776 7999999999997766666554 466788999999999999999
Q ss_pred HhhhhcCCcEEEEEecceecCCCC-----hHHHHHHhcCcccc-cccccCCcccccccHHHHHHHHHHHccCCCCCceEE
Q 017914 202 NLGRDLGISAQVFRLGGIYGPGRS-----SVDTIIKQLPLSEG-QKMRRARQYTSRIHVDDICQVLSASIDKPSAWNVYN 275 (364)
Q Consensus 202 ~~~~~~~~~~~ilRp~~v~g~~~~-----~~~~~~~~~~~~~~-~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~~g~~~~ 275 (364)
.+++.+|++++++||+.+||++.. .+..++.....+.. ...+++.+.++|+|++|++++++.+++... +++||
T Consensus 157 ~~~~~~~~~~~~lR~~~vyGp~~~~~~~~~i~~~i~~~~~g~~i~i~~~g~~~r~~i~v~D~~~~~~~~~~~~~-~~~~n 235 (312)
T d2b69a1 157 AYMKQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSNV-SSPVN 235 (312)
T ss_dssp HHHHHHCCCEEEEEECCEECTTCCTTCCCHHHHHHHHHHHTCCEEEESSSCCEEECEEHHHHHHHHHHHHTSSC-CSCEE
T ss_pred HHHHHhCCcEEEEEeeeEECCCCCCCCccHHHHHHHHHHcCCCeEEeCCCCeeEccEEHHHHHHHHHHHHhhcc-CCceE
Confidence 999999999999999999998742 34444333111111 233678899999999999999999987654 55999
Q ss_pred EeCCCCCCHHHHHHHHHHHhcCCCCCcccCCCCCCCCCCCccCCCCCCCeEEEchhHHHhcCcccCCCCHHHHHHHHHHH
Q 017914 276 VVDDDPAPREEVFAYAWDLVEKKWPGLLKHRKPRENTESSNEKGSSRGEKRVSNVRMKKELGVRLWHPSYKSGLQSIINQ 355 (364)
Q Consensus 276 i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~e~l~~~~~~ 355 (364)
+++++.+++.|+++.+.+.+|.+.+..... ..........+|++|+++.|||+|++ +++|+|+++++|
T Consensus 236 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~-----------~~~~~~~~~~~d~~k~~~~lgw~p~~-~l~~~I~~~i~w 303 (312)
T d2b69a1 236 LGNPEEHTILEFAQLIKNLVGSGSEIQFLS-----------EAQDDPQKRKPDIKKAKLMLGWEPVV-PLEEGLNKAIHY 303 (312)
T ss_dssp ESCCCEEEHHHHHHHHHHHHTCCCCEEEEC-----------CCTTCCCCCCBCCHHHHHHHCCCCCS-CHHHHHHHHHHH
T ss_pred ecCCcccchhhHHHHHHHHhCCCCceEECC-----------CCCCCCCeeeECHHHHHHHHCCCCCC-CHHHHHHHHHHH
Confidence 999999999999999999999874322111 01223345678999999999999999 899999999999
Q ss_pred hcccCC
Q 017914 356 MDQPYQ 361 (364)
Q Consensus 356 ~~~~~~ 361 (364)
|+++++
T Consensus 304 ~~~~~~ 309 (312)
T d2b69a1 304 FRKELE 309 (312)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 999876
|
| >d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose-3', 5'-epimerase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=100.00 E-value=2.6e-43 Score=321.46 Aligned_cols=291 Identities=16% Similarity=0.143 Sum_probs=226.8
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCChhhH--HhhccCceeeEEEEecCC
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETAL--MILTTLKNYTHLLVSIPP 133 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~--~~~~~~d~v~~~~~~~~~ 133 (364)
...|+||||| |||||++|+++|+++||+|++++|.............++..+|+.+.+. ..++++|.|+|+++....
T Consensus 13 ~~nMKILVTGgsGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~Vih~a~~~~~ 92 (363)
T d2c5aa1 13 SENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTEDMFCDEFHLVDLRVMENCLKVTEGVDHVFNLAADMGG 92 (363)
T ss_dssp TSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSCGGGTCSEEEECCTTSHHHHHHHHTTCSEEEECCCCCCC
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCCccchhhhcccCcEEEeechhHHHHHHHhhcCCeEeeccccccc
Confidence 4568999998 9999999999999999999999886544332223567889999999763 667899999999976554
Q ss_pred CCC-CCC------hhhhHHHHHHHHhhcCCccEEEEEccceeecCCCCcc-------ccCCCCCCCCChhHHHHHHHHHH
Q 017914 134 LEG-TGD------PMLKHGELLRSTLMNGHLQWLGYLSSTGVYGHSGGAW-------VDEDYPANPTTELGRLRLSAEKG 199 (364)
Q Consensus 134 ~~~-~~~------~~~~~~~~l~~a~~~~~~~r~v~~Ss~~vy~~~~~~~-------~~E~~~~~~~~~Y~~sK~~~E~~ 199 (364)
... ... .......+++.+++..++++|||+||..+|+.....+ ..|..+..|.++|+.+|.++|++
T Consensus 93 ~~~~~~~~~~~~~~n~~gt~~ll~~~~~~~vk~~i~~SS~~~~~~~~~~~~~~~~~~~~e~~~~~p~~~Yg~sK~~~E~~ 172 (363)
T d2c5aa1 93 MGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYASSACIYPEFKQLETTNVSLKESDAWPAEPQDAFGLEKLATEEL 172 (363)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEGGGSCGGGSSSSSSCEECGGGGSSBCCSSHHHHHHHHHHHH
T ss_pred ccccccccccccccccchhhHHHHhHHhhCccccccccccccccccccccccccccccccCCcCCCCCHHHHHHHHHHHH
Confidence 221 111 2234457889999999999999999999998554332 34566778999999999999999
Q ss_pred HHHhhhhcCCcEEEEEecceecCCCCh-------HHHHHH-h-cCcccccccccCCcccccccHHHHHHHHHHHccCCCC
Q 017914 200 WLNLGRDLGISAQVFRLGGIYGPGRSS-------VDTIIK-Q-LPLSEGQKMRRARQYTSRIHVDDICQVLSASIDKPSA 270 (364)
Q Consensus 200 ~~~~~~~~~~~~~ilRp~~v~g~~~~~-------~~~~~~-~-~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~~ 270 (364)
++++.+++|++++++||+.+||+.+.. ...... . .........++|.+.++|+|++|++++++.+++.. .
T Consensus 173 ~~~~~~~~gl~~~ilR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~rd~i~v~D~~~~~~~~~~~~-~ 251 (363)
T d2c5aa1 173 CKHYNKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQTRSFTFIDECVEGVLRLTKSD-F 251 (363)
T ss_dssp HHHHHHHHCCEEEEEEECCEECTTSCCSSSCCCHHHHHHHHHHHCSSCEEEESCSCCEECCEEHHHHHHHHHHHHHSS-C
T ss_pred HHHHHHHhCCCEEEEEeeeEeccCCcccccccccccccccccccccccccccCCCCeEEEEeehhHHHHHHHHHHhCC-C
Confidence 999998899999999999999987431 111111 1 11122234567889999999999999999998865 4
Q ss_pred CceEEEeCCCCCCHHHHHHHHHHHhcCCCCCcccCCCCCCCCCCCccCCCCCCCeEEEchhHHHhcCcccCCCCHHHHHH
Q 017914 271 WNVYNVVDDDPAPREEVFAYAWDLVEKKWPGLLKHRKPRENTESSNEKGSSRGEKRVSNVRMKKELGVRLWHPSYKSGLQ 350 (364)
Q Consensus 271 g~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~e~l~ 350 (364)
+++||+++++.+++.|+++.+.+.+|.+.+..... .........+|++|+++.|||+|++ +++|+|+
T Consensus 252 ~~~~ni~~~~~~s~~~l~~~i~~~~g~~~~i~~~~------------~~~~~~~~~~d~ska~~~LGw~p~~-sleegi~ 318 (363)
T d2c5aa1 252 REPVNIGSDEMVSMNEMAEMVLSFEEKKLPIHHIP------------GPEGVRGRNSDNNLIKEKLGWAPNM-RLKEGLR 318 (363)
T ss_dssp CSCEEECCCCCEEHHHHHHHHHHTTTCCCCEEEEC------------CCCCCSBCEECCHHHHHHHSCCCCC-CHHHHHH
T ss_pred CCeEEEecCCcccHHHHHHHHHHHhCCCCceEeCC------------CCCCccccccCHHHHHHHhCCCCCC-CHHHHHH
Confidence 66999999999999999999999999874422111 1122344568999999999999999 8999999
Q ss_pred HHHHHhcccCC
Q 017914 351 SIINQMDQPYQ 361 (364)
Q Consensus 351 ~~~~~~~~~~~ 361 (364)
++++||+++++
T Consensus 319 ~ti~w~~~~~~ 329 (363)
T d2c5aa1 319 ITYFWIKEQIE 329 (363)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99999988764
|
| >d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-N-acetylglucosamine 4-epimerase WbpP species: Pseudomonas aeruginosa [TaxId: 287]
Probab=100.00 E-value=2.7e-43 Score=318.63 Aligned_cols=298 Identities=13% Similarity=0.059 Sum_probs=229.7
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchh----hhh-------hhhCCceEEEccCChhhH--HhhccCc
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMK----KKE-------LEQSGFDVHLFNANETAL--MILTTLK 122 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~----~~~-------l~~~~~~~~~~D~~~~~~--~~~~~~d 122 (364)
..+|+||||| |||||++|+++|+++||+|++++|.... ... ....+++++.+|..|... ......+
T Consensus 14 ~~~k~iLVTG~tGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~~ 93 (341)
T d1sb8a_ 14 AQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACAGVD 93 (341)
T ss_dssp HSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHTTCS
T ss_pred CCCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHHhhhhcccCCeeEEeecccccccccccccccc
Confidence 3457999999 9999999999999999999999873221 111 112578899999999664 5567789
Q ss_pred eeeEEEEecCCCCCCCC------hhhhHHHHHHHHhhcCCccEEEEEccceeecCCCCccccCCCCCCCCChhHHHHHHH
Q 017914 123 NYTHLLVSIPPLEGTGD------PMLKHGELLRSTLMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANPTTELGRLRLSA 196 (364)
Q Consensus 123 ~v~~~~~~~~~~~~~~~------~~~~~~~~l~~a~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~~sK~~~ 196 (364)
.|+|+++......+..+ .....+.|++++|.+.++++|||+||..+||.....+++|+++..|.+.|+.+|.++
T Consensus 94 ~v~~~~a~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~ 173 (341)
T d1sb8a_ 94 YVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAKVQSFTYAASSSTYGDHPGLPKVEDTIGKPLSPYAVTKYVN 173 (341)
T ss_dssp EEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGTTCCCSSBCTTCCCCCCSHHHHHHHHH
T ss_pred ccccccccccccccccCccchhheeehhHHHHHHHHHhcCCceEEEcccceeeCCCCCCCccCCCCCCCCCcchHHHHHH
Confidence 99998865433222222 233556789999999999999999999999998888999999999999999999999
Q ss_pred HHHHHHhhhhcCCcEEEEEecceecCCCC-------hHHHHHHhcCccc-ccccccCCcccccccHHHHHHHHHHHccCC
Q 017914 197 EKGWLNLGRDLGISAQVFRLGGIYGPGRS-------SVDTIIKQLPLSE-GQKMRRARQYTSRIHVDDICQVLSASIDKP 268 (364)
Q Consensus 197 E~~~~~~~~~~~~~~~ilRp~~v~g~~~~-------~~~~~~~~~~~~~-~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~ 268 (364)
|++++.+++..+++++++||+++||++.. .+..+......+. ....++|.+.++|+|++|+|.++..++...
T Consensus 174 E~~~~~~~~~~~i~~~ilR~~~v~G~~~~~~~~~~~~i~~~~~~~~~g~~i~~~g~g~~~r~~i~v~D~~~a~~~~~~~~ 253 (341)
T d1sb8a_ 174 ELYADVFSRCYGFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGETSRDFCYIENTVQANLLAATAG 253 (341)
T ss_dssp HHHHHHHHHHHCCCCEEEEECCEECTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCEECCEEHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHhCCCeEEEEeceeeccCcCCCCchhhhHHHHHHHHHcCCceEEcCCCCEEEEEEEEeccchhhhhhhhcc
Confidence 99999999999999999999999998642 2333322211111 123467889999999999999999988775
Q ss_pred C--CCceEEEeCCCCCCHHHHHHHHHHHhcCCCCCcccCCCCCCCCCCCccCCCCCCCeEEEchhHHHhcCcccCCCCHH
Q 017914 269 S--AWNVYNVVDDDPAPREEVFAYAWDLVEKKWPGLLKHRKPRENTESSNEKGSSRGEKRVSNVRMKKELGVRLWHPSYK 346 (364)
Q Consensus 269 ~--~g~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~ 346 (364)
. .+++||+++++.+|+.|+++.+.+.++.+....... ...............+|++|+++.|||+|++ +++
T Consensus 254 ~~~~~~~~~~~~~~~~si~~i~~~i~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~d~~k~~~~LGw~p~~-sl~ 326 (341)
T d1sb8a_ 254 LDARNQVYNIAVGGRTSLNQLFFALRDGLAENGVSYHRE------PVYRDFREGDVRHSLADISKAAKLLGYAPKY-DVS 326 (341)
T ss_dssp GGGCSEEEEESCSCCEEHHHHHHHHHHHHHHTTCCCCCC------CEEECCCTTCCSBCCBCCHHHHHHTCCCCCC-CHH
T ss_pred ccccceeeeecccccchHHHHHHHHHHHhcccccccccc------ccccCCCCCCcCeeeeCHHHHHHHHCCCcCC-CHH
Confidence 3 478999999999999999999999998652111111 0011111122334567999999999999999 899
Q ss_pred HHHHHHHHHhcccCC
Q 017914 347 SGLQSIINQMDQPYQ 361 (364)
Q Consensus 347 e~l~~~~~~~~~~~~ 361 (364)
|+|+++++||+++++
T Consensus 327 ~gi~~ti~wy~~~~k 341 (341)
T d1sb8a_ 327 AGVALAMPWYIMFLK 341 (341)
T ss_dssp HHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHhcC
Confidence 999999999998764
|
| >d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=6e-42 Score=309.27 Aligned_cols=293 Identities=17% Similarity=0.122 Sum_probs=222.2
Q ss_pred CeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchh-------hhhhhhCCceEEEccCChhhH--Hhhc--cCceeeEE
Q 017914 60 NRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMK-------KKELEQSGFDVHLFNANETAL--MILT--TLKNYTHL 127 (364)
Q Consensus 60 ~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~-------~~~l~~~~~~~~~~D~~~~~~--~~~~--~~d~v~~~ 127 (364)
||||||| |||||++|++.|+++||+|++++|.... .......++.++++|++|.+. ..++ ++|+|+|+
T Consensus 1 MKiLItG~tGfIG~~l~~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~d~ViHl 80 (338)
T d1udca_ 1 MRVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALMTEILHDHAIDTVIHF 80 (338)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHHTSCCEEEECCTTCHHHHHHHHHHTTCSEEEEC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHhhcCCCCEEEEeecCCHHHHHHHHhccCCCEEEEC
Confidence 7899999 9999999999999999999999873211 122334689999999999774 5555 78999999
Q ss_pred EEecCCCCCCCCh------hhhHHHHHHHHhhcCCccEEEEEccceeecCCCCccccCCC-CCCCCChhHHHHHHHHHHH
Q 017914 128 LVSIPPLEGTGDP------MLKHGELLRSTLMNGHLQWLGYLSSTGVYGHSGGAWVDEDY-PANPTTELGRLRLSAEKGW 200 (364)
Q Consensus 128 ~~~~~~~~~~~~~------~~~~~~~l~~a~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~-~~~~~~~Y~~sK~~~E~~~ 200 (364)
|+......+..++ ....+.|+++++++.++++||++||..+|+.....+..|.. ...|.++|+.+|..+|.++
T Consensus 81 Aa~~~~~~~~~~~~~~~~~Nv~gt~nlL~~~~~~~v~~~i~~Ss~~vy~~~~~~~~~e~~~~~~p~~~Y~~sK~~~e~~~ 160 (338)
T d1udca_ 81 AGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNFIFSSSATVYGDQPKIPYVESFPTGTPQSPYGKSKLMVEQIL 160 (338)
T ss_dssp CSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCCSSSBCTTSCCCCCSSHHHHHHHHHHHHH
T ss_pred CCccchhhHHhCHHHHHHhHHHHHHHHHHHHHHhCCCEEEecCcceEEccccccccccccccCCCcchHHHHHhhhhHHH
Confidence 9854322222222 23445688999998999999999999999877665555554 5578999999999999999
Q ss_pred HHhhhh-cCCcEEEEEecceecCCCC-------------hHHHHHHh-----cCc---ccccccccCCcccccccHHHHH
Q 017914 201 LNLGRD-LGISAQVFRLGGIYGPGRS-------------SVDTIIKQ-----LPL---SEGQKMRRARQYTSRIHVDDIC 258 (364)
Q Consensus 201 ~~~~~~-~~~~~~ilRp~~v~g~~~~-------------~~~~~~~~-----~~~---~~~~~~~~~~~~~~~i~v~Dva 258 (364)
.++... .+++++++|++.+||+... .+..+... ..+ +......++.+.++|+|++|++
T Consensus 161 ~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~i~i~g~~~~~~~g~~~rd~i~v~D~~ 240 (338)
T d1udca_ 161 TDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDYIHVMDLA 240 (338)
T ss_dssp HHHHHHSTTCEEEEEEECEEECCCTTSSSCCCCCSSCCSHHHHHHHHHTTSSSCEEEECSCSSSTTSSCEECEEEHHHHH
T ss_pred HHHHhhccCCeEEEEeeccEEeccCCCCCCCCccccHHHHHHHHHHHHhcCCCCEEEeCCCcccCCCCceeeEEEEeehh
Confidence 876654 5899999999999997532 23333332 111 1222334678899999999999
Q ss_pred HHHHHHccC---CCCCceEEEeCCCCCCHHHHHHHHHHHhcCCCCCcccCCCCCCCCCCCccCCCCCCCeEEEchhHHHh
Q 017914 259 QVLSASIDK---PSAWNVYNVVDDDPAPREEVFAYAWDLVEKKWPGLLKHRKPRENTESSNEKGSSRGEKRVSNVRMKKE 335 (364)
Q Consensus 259 ~~~~~~l~~---~~~g~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~ 335 (364)
.++..+... ...+++||+++++++|+.|+++.+.+.+|.+.+..... . .........+|++|+++.
T Consensus 241 ~~~~~~~~~~~~~~~~~i~Ni~~~~~~si~e~~~~i~~~~g~~~~~~~~~-------~----~~~~~~~~~~d~~k~~~~ 309 (338)
T d1udca_ 241 DGHVVAMEKLANKPGVHIYNLGAGVGNSVLDVVNAFSKACGKPVNYHFAP-------R----REGDLPAYWADASKADRE 309 (338)
T ss_dssp HHHHHHHHHHTTCCEEEEEEESCSSCEEHHHHHHHHHHHHTSCCCEEEEC-------C----CTTCCSBCCBCCHHHHHH
T ss_pred hhccccccccccccCcceeeecCCCCCcHHHHHHHHHHHHCCCCceEECC-------C----CCCCCCEeeECHHHHHHH
Confidence 888776653 33468999999999999999999999999874432211 0 112234456899999999
Q ss_pred cCcccCCCCHHHHHHHHHHHhcccCCCCC
Q 017914 336 LGVRLWHPSYKSGLQSIINQMDQPYQCSP 364 (364)
Q Consensus 336 lG~~p~~~~~~e~l~~~~~~~~~~~~~~~ 364 (364)
|||+|++ +++|+|+++++|+++|.+=||
T Consensus 310 lgwkp~~-~l~egi~~ti~w~~~~~~~~~ 337 (338)
T d1udca_ 310 LNWRVTR-TLDEMAQDTWHWQSRHPQGYP 337 (338)
T ss_dssp HCCCCCC-CHHHHHHHHHHHHHHCTTCSC
T ss_pred HCCCcCC-CHHHHHHHHHHHHHhchhhCC
Confidence 9999999 899999999999999987665
|
| >d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Probab=100.00 E-value=1.3e-42 Score=316.08 Aligned_cols=297 Identities=15% Similarity=0.163 Sum_probs=218.7
Q ss_pred CeEEEEc-CChhhHHHHHHHHhCCCEEEE-EEeCch-----hhhhh-hhCCceEEEccCChhhH--Hhhc--cCceeeEE
Q 017914 60 NRMLILG-MGFVGRIFAEKIKNQGWVVSG-TCTNVM-----KKKEL-EQSGFDVHLFNANETAL--MILT--TLKNYTHL 127 (364)
Q Consensus 60 ~~vlVtG-tG~iG~~l~~~L~~~g~~V~~-~~r~~~-----~~~~l-~~~~~~~~~~D~~~~~~--~~~~--~~d~v~~~ 127 (364)
|+||||| |||||++|+++|+++|++|++ +++... ....+ ...+++++.+|++|++. ..+. .+|+|+|+
T Consensus 1 MkILItG~tGfIGs~l~~~L~~~g~~vv~~~d~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~d~Vihl 80 (361)
T d1kewa_ 1 MKILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNFEHADICDSAEITRIFEQYQPDAVMHL 80 (361)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCccccHHHHHhhhhcCCcEEEEccCCCHHHHHHHHHhCCCCEEEEC
Confidence 6899999 999999999999999997555 443211 11112 22578999999999763 4443 58999999
Q ss_pred EEecCCCCCCCChh------hhHHHHHHHHhhcC---------CccEEEEEccceeecCCCCcc----------ccCCCC
Q 017914 128 LVSIPPLEGTGDPM------LKHGELLRSTLMNG---------HLQWLGYLSSTGVYGHSGGAW----------VDEDYP 182 (364)
Q Consensus 128 ~~~~~~~~~~~~~~------~~~~~~l~~a~~~~---------~~~r~v~~Ss~~vy~~~~~~~----------~~E~~~ 182 (364)
|+......+..++. ...+.|++.++++. ++++|||+||..+||.....+ ..|..+
T Consensus 81 Aa~~~~~~~~~~p~~~~~~N~~gt~nl~~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~~~~~~~~e~~~ 160 (361)
T d1kewa_ 81 AAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTETTA 160 (361)
T ss_dssp CSCCCHHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSCTTSCCCCBCTTSC
T ss_pred ccccchhhHHhCHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCceEEEEeccceeeCCCccCCccccccCCCCcccCCC
Confidence 98644322222222 23346777777643 456999999999999655433 345667
Q ss_pred CCCCChhHHHHHHHHHHHHHhhhhcCCcEEEEEecceecCCCC---hHHHHHHhcCccc-ccccccCCcccccccHHHHH
Q 017914 183 ANPTTELGRLRLSAEKGWLNLGRDLGISAQVFRLGGIYGPGRS---SVDTIIKQLPLSE-GQKMRRARQYTSRIHVDDIC 258 (364)
Q Consensus 183 ~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilRp~~v~g~~~~---~~~~~~~~~~~~~-~~~~~~~~~~~~~i~v~Dva 258 (364)
..|.+.|+.+|.++|.++..+.++++++++++||+.+|||+.. .+..++.....+. ....++|++.++|+|++|+|
T Consensus 161 ~~p~s~Yg~sK~~~E~~~~~~~~~~~i~~~~lR~~~vyGp~~~~~~~i~~~i~~~~~g~~~~v~g~g~~~r~~i~v~D~a 240 (361)
T d1kewa_ 161 YAPSSPYSASKASSDHLVRAWRRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYGKGDQIRDWLYVEDHA 240 (361)
T ss_dssp CCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEESTTCCTTSHHHHHHHHHHHTCCEEEETTSCCEEEEEEHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHhCCCEEEEecCceECcCCCcCcHHHHHHHHHHcCCCcEEeCCCCeEEeCEEHHHHH
Confidence 7889999999999999999999999999999999999998753 4454444321111 12347889999999999999
Q ss_pred HHHHHHccCCCCCceEEEeCCCCCCHHHHHHHHHHHhcCCCCCcccCCCCCCCCCCCccCCCCCCCeEEEchhHHHhcCc
Q 017914 259 QVLSASIDKPSAWNVYNVVDDDPAPREEVFAYAWDLVEKKWPGLLKHRKPRENTESSNEKGSSRGEKRVSNVRMKKELGV 338 (364)
Q Consensus 259 ~~~~~~l~~~~~g~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~ 338 (364)
++++.++++...|++||+++++.+++.|+++.+.+.++...+........ ...............+|++|++++|||
T Consensus 241 ~ai~~~~~~~~~~~~~Ni~s~~~~s~~~~~~~i~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~d~~k~~~~lgw 317 (361)
T d1kewa_ 241 RALHMVVTEGKAGETYNIGGHNEKKNLDVVFTICDLLDEIVPKATSYREQ---ITYVADRPGHDRRYAIDAGKISRELGW 317 (361)
T ss_dssp HHHHHHHHHCCTTCEEEECCCCEEEHHHHHHHHHHHHHHHSCCSSCGGGG---EEEECCCTTCCCBCCBCCHHHHHHHCC
T ss_pred HHHHHHHhcCCCCCeEEECCCCCcchHHHHhHhhhhcccccccccCcccc---eeecCCCCCCCceeeeCHHHHHHHHCC
Confidence 99999999988888999999999999999999999886553322111000 000000112334567899999999999
Q ss_pred ccCCCCHHHHHHHHHHHhcccC
Q 017914 339 RLWHPSYKSGLQSIINQMDQPY 360 (364)
Q Consensus 339 ~p~~~~~~e~l~~~~~~~~~~~ 360 (364)
+|++ +++|+|+++++|+++|.
T Consensus 318 ~P~~-~l~e~i~~ti~w~~~n~ 338 (361)
T d1kewa_ 318 KPLE-TFESGIRKTVEWYLANT 338 (361)
T ss_dssp CCSC-CHHHHHHHHHHHHHHCH
T ss_pred CCCC-CHHHHHHHHHHHHHHhH
Confidence 9999 89999999999998873
|
| >d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Probab=100.00 E-value=7.2e-42 Score=309.78 Aligned_cols=292 Identities=15% Similarity=0.174 Sum_probs=224.1
Q ss_pred CCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCc-------hhhhhhhhCCceEEEccCChhhH--HhhccCceeeEEE
Q 017914 59 PNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNV-------MKKKELEQSGFDVHLFNANETAL--MILTTLKNYTHLL 128 (364)
Q Consensus 59 ~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~-------~~~~~l~~~~~~~~~~D~~~~~~--~~~~~~d~v~~~~ 128 (364)
||+||||| |||||++|+++|+++|++|.++.++. .....+...+++++.+|++|.+. .++...+.|+|+|
T Consensus 2 ~mkILVTGgtGfIGs~lv~~L~~~g~~v~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~Di~d~~~~~~~~~~~~~v~~~a 81 (346)
T d1oc2a_ 2 FKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAILGDRVELVVGDIADAELVDKLAAKADAIVHYA 81 (346)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGGGCSSSEEEEECCTTCHHHHHHHHTTCSEEEECC
T ss_pred cCEEEEeCCCcHHHHHHHHHHHHCCCCeEEEEEeCCCccccHHHHHHhhcCCeEEEEccCCCHHHHHHHHhhhhhhhhhh
Confidence 68999999 99999999999999999876665531 12223334688999999999774 6778899999998
Q ss_pred EecCCCCCCCC------hhhhHHHHHHHHhhcCCccEEEEEccceeecCC------------CCccccCCCCCCCCChhH
Q 017914 129 VSIPPLEGTGD------PMLKHGELLRSTLMNGHLQWLGYLSSTGVYGHS------------GGAWVDEDYPANPTTELG 190 (364)
Q Consensus 129 ~~~~~~~~~~~------~~~~~~~~l~~a~~~~~~~r~v~~Ss~~vy~~~------------~~~~~~E~~~~~~~~~Y~ 190 (364)
+.........+ .....+.|++.++...+. ++|++||..+||.. ....++|+++..|.+.|+
T Consensus 82 ~~~~~~~~~~~~~~~~~~N~~g~~nll~~~~~~~~-k~i~~ss~~vyg~~~~~~~~~~~~~~~~~~~~e~~~~~p~s~Y~ 160 (346)
T d1oc2a_ 82 AESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYDI-RFHHVSTDEVYGDLPLREDLPGHGEGPGEKFTAETNYNPSSPYS 160 (346)
T ss_dssp SCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHHTC-EEEEEEEGGGGCCBCCGGGSTTTTCSTTSSBCTTSCCCCCSHHH
T ss_pred hcccccchhhCcccceeeehHhHHhhhhhhccccc-cccccccceEecccCccccccccccCcccccccCCCCCCCCHHH
Confidence 76443221122 223455688888887764 79999999999742 123467778888999999
Q ss_pred HHHHHHHHHHHHhhhhcCCcEEEEEecceecCCCC---hHHHHHHh-cCcccccccccCCcccccccHHHHHHHHHHHcc
Q 017914 191 RLRLSAEKGWLNLGRDLGISAQVFRLGGIYGPGRS---SVDTIIKQ-LPLSEGQKMRRARQYTSRIHVDDICQVLSASID 266 (364)
Q Consensus 191 ~sK~~~E~~~~~~~~~~~~~~~ilRp~~v~g~~~~---~~~~~~~~-~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~ 266 (364)
.+|.++|.+++.+++.++++++++||+.+||+... .+..++.. ..-......+++.+.++|+|++|+|++++.++.
T Consensus 161 ~sK~~~E~~~~~~~~~~~i~~~ilR~~~vyGp~~~~~~~~~~~i~~~~~~~~~~i~~~g~~~r~~i~v~D~a~a~~~~~~ 240 (346)
T d1oc2a_ 161 STKAASDLIVKAWVRSFGVKATISNCSNNYGPYQHIEKFIPRQITNILAGIKPKLYGEGKNVRDWIHTNDHSTGVWAILT 240 (346)
T ss_dssp HHHHHHHHHHHHHHHHHCCEEEEEEECCEESTTCCTTSHHHHHHHHHHHTCCCEEETTSCCEEECEEHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCCEEEEeecceeCCCCCccchhHHHHHHHHcCCceeEeCCCCccccccchhhHHHHHHHHHh
Confidence 99999999999999889999999999999998643 33333322 111112345788999999999999999999999
Q ss_pred CCCCCceEEEeCCCCCCHHHHHHHHHHHhcCCCCCcccCCCCCCCCCCCccCCCCCCCeEEEchhHHHhcCcccCCCCHH
Q 017914 267 KPSAWNVYNVVDDDPAPREEVFAYAWDLVEKKWPGLLKHRKPRENTESSNEKGSSRGEKRVSNVRMKKELGVRLWHPSYK 346 (364)
Q Consensus 267 ~~~~g~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~ 346 (364)
++..++.||+++++..++.|+++.+.+.++.+... +..... .+.......+|++|++++|||+|++++|+
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~---------~~~~~~~~~~d~~k~~~~LGw~P~~t~l~ 310 (346)
T d1oc2a_ 241 KGRMGETYLIGADGEKNNKEVLELILEKMGQPKDA-YDHVTD---------RAGHDLRYAIDASKLRDELGWTPQFTDFS 310 (346)
T ss_dssp HCCTTCEEEECCSCEEEHHHHHHHHHHHTTCCTTC-SEEECC---------CTTCCCBCCBCCHHHHHHHCCCCSCCCHH
T ss_pred hcccCccccccccccccchHHHHHHHHHhCCCCcc-eEECCC---------CCCCCceeeeCHHHHHHHHCCCCcCCCHH
Confidence 99889999999999999999999999999876322 222000 11223335579999999999999985699
Q ss_pred HHHHHHHHHhcccCC
Q 017914 347 SGLQSIINQMDQPYQ 361 (364)
Q Consensus 347 e~l~~~~~~~~~~~~ 361 (364)
|+|+++++|+++|.+
T Consensus 311 e~i~~ti~w~~~n~~ 325 (346)
T d1oc2a_ 311 EGLEETIQWYTDNQD 325 (346)
T ss_dssp HHHHHHHHHHHHTHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 999999999998754
|
| >d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=100.00 E-value=4.8e-41 Score=301.25 Aligned_cols=293 Identities=13% Similarity=0.104 Sum_probs=220.7
Q ss_pred CeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhh--hhh---h-hCCceEEEccCChhhH--Hhh--ccCceeeEEE
Q 017914 60 NRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKK--KEL---E-QSGFDVHLFNANETAL--MIL--TTLKNYTHLL 128 (364)
Q Consensus 60 ~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~--~~l---~-~~~~~~~~~D~~~~~~--~~~--~~~d~v~~~~ 128 (364)
|+||||| |||||++|+++|+++||+|++++|..... ..+ . ..+++++.+|++|.+. ..+ ...++++|++
T Consensus 1 k~vLItG~tGfiG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~~~a 80 (321)
T d1rpna_ 1 RSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMADACSVQRAVIKAQPQEVYNLA 80 (321)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHTTCGGGEEEEECCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcccHHHHHHhcccCCcEEEEccccChHHhhhhhcccccccccccc
Confidence 6899999 99999999999999999999999965321 112 1 3578999999999764 333 2345666665
Q ss_pred EecCCCCCCCChh------hhHHHHHHHHhhcCCc-cEEEEEccceeecCCCCccccCCCCCCCCChhHHHHHHHHHHHH
Q 017914 129 VSIPPLEGTGDPM------LKHGELLRSTLMNGHL-QWLGYLSSTGVYGHSGGAWVDEDYPANPTTELGRLRLSAEKGWL 201 (364)
Q Consensus 129 ~~~~~~~~~~~~~------~~~~~~l~~a~~~~~~-~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~~sK~~~E~~~~ 201 (364)
+.........++. ...+.|+++++++.++ ++|++.||..+|+.....+.+|+++..|.+.|+.+|.++|.+++
T Consensus 81 ~~~~~~~~~~~~~~~~~~n~~g~~~~l~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~ 160 (321)
T d1rpna_ 81 AQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRFYQASTSEMFGLIQAERQDENTPFYPRSPYGVAKLYGHWITV 160 (321)
T ss_dssp SCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTSEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHHHHHHHHHHHHH
T ss_pred ccccccccccchHHHHhhhhhchHHHHHHHHHhCCCcccccccchhhcCcccCCCCCCCCCccccChhHHHHHHHHHHHH
Confidence 4433222222222 2345677888876664 47888899999988888889999999999999999999999999
Q ss_pred HhhhhcCCcEEEEEecceecCCCC--h----HHHHHHhcCcccc--cccccCCcccccccHHHHHHHHHHHccCCCCCce
Q 017914 202 NLGRDLGISAQVFRLGGIYGPGRS--S----VDTIIKQLPLSEG--QKMRRARQYTSRIHVDDICQVLSASIDKPSAWNV 273 (364)
Q Consensus 202 ~~~~~~~~~~~ilRp~~v~g~~~~--~----~~~~~~~~~~~~~--~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~~g~~ 273 (364)
++.++++++++++||+++||+... . +..++........ ...+++++.++|+|++|+|++++.+++++.. +.
T Consensus 161 ~~~~~~~~~~~~lr~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~i~~g~g~~~r~~i~v~D~~~~~~~~~~~~~~-~~ 239 (321)
T d1rpna_ 161 NYRESFGLHASSGILFNHESPLRGIEFVTRKVTDAVARIKLGKQQELRLGNVDAKRDWGFAGDYVEAMWLMLQQDKA-DD 239 (321)
T ss_dssp HHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEEECEEHHHHHHHHHHHHHSSSC-CC
T ss_pred HHHhhcCCcEEEEEEecccCCCccccccHHHHHHHHHHHHhCCCCcEEECCCCeEEccEEeHHHHHHHHHHHhcCCc-CC
Confidence 999999999999999999998632 1 1122222112222 2347889999999999999999999998765 48
Q ss_pred EEEeCCCCCCHHHHHHHHHHHhcCCCCCcccCCCCCCCCCCCccCCCCCCCeEEEchhHHHhcCcccCCCCHHHHHHHHH
Q 017914 274 YNVVDDDPAPREEVFAYAWDLVEKKWPGLLKHRKPRENTESSNEKGSSRGEKRVSNVRMKKELGVRLWHPSYKSGLQSII 353 (364)
Q Consensus 274 ~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~e~l~~~~ 353 (364)
||+++++..++.++++.+.+.+|.+.+....... ....+........|++|+++.|||+|++ +|+|+|++++
T Consensus 240 ~ni~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~-------~~~rp~~~~~~~~d~~k~~k~lG~~P~~-~l~e~i~~tv 311 (321)
T d1rpna_ 240 YVVATGVTTTVRDMCQIAFEHVGLDYRDFLKIDP-------AFFRPAEVDVLLGNPAKAQRVLGWKPRT-SLDELIRMMV 311 (321)
T ss_dssp EEECCSCEEEHHHHHHHHHHTTTCCGGGTEEECG-------GGCCSSCCCBCCBCTHHHHHHHCCCCCS-CHHHHHHHHH
T ss_pred ceecccccceehhhhHHHHHHhCCCccceeecCC-------CCCCCCccCCccCCHHHHHHHHCCCcCC-CHHHHHHHHH
Confidence 9999999999999999999999876433222200 0011122334667999999999999999 8999999999
Q ss_pred HHhcccCC
Q 017914 354 NQMDQPYQ 361 (364)
Q Consensus 354 ~~~~~~~~ 361 (364)
+|+.++.+
T Consensus 312 ~~~l~~~~ 319 (321)
T d1rpna_ 312 EADLRRVS 319 (321)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHhc
Confidence 99887643
|
| >d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Polymyxin resistance protein ArnA (PrmI) species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=4.8e-40 Score=297.29 Aligned_cols=300 Identities=16% Similarity=0.137 Sum_probs=218.8
Q ss_pred CeEEEEc-CChhhHHHHHHHHhCC-CEEEEEEeCchhhhhh-hhCCceEEEccCChhh-H--HhhccCceeeEEEEecCC
Q 017914 60 NRMLILG-MGFVGRIFAEKIKNQG-WVVSGTCTNVMKKKEL-EQSGFDVHLFNANETA-L--MILTTLKNYTHLLVSIPP 133 (364)
Q Consensus 60 ~~vlVtG-tG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~l-~~~~~~~~~~D~~~~~-~--~~~~~~d~v~~~~~~~~~ 133 (364)
||||||| |||||++|+++|+++| ++|+++++.......+ ..++++++.+|+++.+ . ....++|.|+|+|+....
T Consensus 1 MKILITG~tGfiG~~l~~~Ll~~g~~~V~~ld~~~~~~~~~~~~~~~~~i~~Di~~~~~~~~~~~~~~d~Vih~a~~~~~ 80 (342)
T d2blla1 1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPHFHFVEGDISIHSEWIEYHVKKCDVVLPLVAIATP 80 (342)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGTTCTTEEEEECCTTTCSHHHHHHHHHCSEEEECBCCCCH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcchhhhccCCCeEEEECccCChHHHHHHHHhCCCccccccccccc
Confidence 6899999 9999999999999999 5999999865544433 3468999999998854 3 356789999999986543
Q ss_pred CCCCCC------hhhhHHHHHHHHhhcCCccEEEEEccceeecCCCCccccCCC-------CCCCCChhHHHHHHHHHHH
Q 017914 134 LEGTGD------PMLKHGELLRSTLMNGHLQWLGYLSSTGVYGHSGGAWVDEDY-------PANPTTELGRLRLSAEKGW 200 (364)
Q Consensus 134 ~~~~~~------~~~~~~~~l~~a~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~-------~~~~~~~Y~~sK~~~E~~~ 200 (364)
.....+ .....+.|+++++.+.++ +++|.||..+|+.......+|.. ...|.+.|+.+|..+|+++
T Consensus 81 ~~~~~~~~~~~~~nv~gt~~ll~~~~~~~~-~~~~~ss~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~Y~~sK~~~E~~~ 159 (342)
T d2blla1 81 IEYTRNPLRVFELDFEENLRIIRYCVKYRK-RIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVI 159 (342)
T ss_dssp HHHHHSHHHHHHHHTHHHHHHHHHHHHTTC-EEEEECCGGGGBTCCCSSBCTTTCCCBCCCTTCGGGHHHHHHHHHHHHH
T ss_pred cccccCCccccccccccccccccccccccc-cccccccccccccccccccccccccccccccCCCcchhhhcccchhhhh
Confidence 222222 223445788888888876 46788999999977665544432 3356688999999999999
Q ss_pred HHhhhhcCCcEEEEEecceecCCCC-----------hHHHHHHhc-CcccccccccCCcccccccHHHHHHHHHHHccCC
Q 017914 201 LNLGRDLGISAQVFRLGGIYGPGRS-----------SVDTIIKQL-PLSEGQKMRRARQYTSRIHVDDICQVLSASIDKP 268 (364)
Q Consensus 201 ~~~~~~~~~~~~ilRp~~v~g~~~~-----------~~~~~~~~~-~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~ 268 (364)
+.+.++++++++++|++.+||+... .+..+.... .-......++|++.++|+|++|+|+++..+++++
T Consensus 160 ~~~~~~~~~~~~i~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~r~~i~v~D~~~a~~~~~~~~ 239 (342)
T d2blla1 160 WAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEALYRIIENA 239 (342)
T ss_dssp HHHHHHHCCCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHHHTCCEEEGGGSCCEEECEEHHHHHHHHHHHHHCG
T ss_pred hhhhcccCceeEEeeccccccccccccccccccccccchHHHHHHHhCCCccccCCCCeeeeecccccccceeeeehhhc
Confidence 9999999999999999999998532 122222221 1111223567899999999999999999999874
Q ss_pred ---CCCceEEEeCCCC-CCHHHHHHHHHHHhcCCCCCcccCCCCCC--CCCCCc---cCCCCCCCeEEEchhHHHhcCcc
Q 017914 269 ---SAWNVYNVVDDDP-APREEVFAYAWDLVEKKWPGLLKHRKPRE--NTESSN---EKGSSRGEKRVSNVRMKKELGVR 339 (364)
Q Consensus 269 ---~~g~~~~i~~~~~-~s~~el~~~i~~~~g~~~~~~~~~~~~~~--~~~~~~---~~~~~~~~~~~d~~k~~~~lG~~ 339 (364)
..|++||+++++. +|+.|+++.+.+.+|.... ....+.... ...... ..........+|++|++++|||+
T Consensus 240 ~~~~~g~~~Nig~~~~~~t~~~l~~~i~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lgw~ 318 (342)
T d2blla1 240 GNRCDGEIINIGNPENEASIEELGEMLLASFEKHPL-RHHFPPFAGFRVVESSSYYGKGYQDVEHRKPSIRNAHRCLDWE 318 (342)
T ss_dssp GGTTTTEEEEECCTTSEEEHHHHHHHHHHHHHTCTT-GGGSCCCCCEEEC------------CCCCCBCCHHHHHHHCCC
T ss_pred cccCCCeEEEEecccchhHHHHHHHHHHHHhCCCcc-ccccCcccccceeccccccccccccccccccCHHHHHHHHCCC
Confidence 3478999987764 8999999999999987632 221110000 000000 00112234467999999999999
Q ss_pred cCCCCHHHHHHHHHHHhcccCCC
Q 017914 340 LWHPSYKSGLQSIINQMDQPYQC 362 (364)
Q Consensus 340 p~~~~~~e~l~~~~~~~~~~~~~ 362 (364)
|++ +++|+|+++++||++|.|-
T Consensus 319 P~~-sleegl~~ti~~y~~~~~~ 340 (342)
T d2blla1 319 PKI-DMQETIDETLDFFLRTVDL 340 (342)
T ss_dssp CCC-CHHHHHHHHHHHHHHHSCT
T ss_pred cCC-CHHHHHHHHHHHHHhCcCC
Confidence 999 8999999999999998764
|
| >d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.2e-40 Score=299.04 Aligned_cols=299 Identities=14% Similarity=0.082 Sum_probs=217.7
Q ss_pred CeE-EEEc-CChhhHHHHHHHHhCCCEEEEEEeCchh-----hhhh-------hhCCceEEEccCChhhH--Hhh--ccC
Q 017914 60 NRM-LILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMK-----KKEL-------EQSGFDVHLFNANETAL--MIL--TTL 121 (364)
Q Consensus 60 ~~v-lVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~-----~~~l-------~~~~~~~~~~D~~~~~~--~~~--~~~ 121 (364)
||| |||| |||||++|+++|+++||+|++++|.... .+.+ ...+++++.+|++|.+. .++ .+.
T Consensus 1 kKI~LVTG~tGfIG~~l~~~Ll~~g~~V~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~ 80 (347)
T d1t2aa_ 1 RNVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEVKP 80 (347)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHHCC
T ss_pred CCEEEEecCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHhhchhhhccCCcEEEEeecCCchhhHHHHhhccc
Confidence 578 9999 9999999999999999999999996432 1111 11467899999999774 444 355
Q ss_pred ceeeEEEEecCCCCCCCCh------hhhHHHHHHHHhhcCCc---cEEEEEccceeecCCCCccccCCCCCCCCChhHHH
Q 017914 122 KNYTHLLVSIPPLEGTGDP------MLKHGELLRSTLMNGHL---QWLGYLSSTGVYGHSGGAWVDEDYPANPTTELGRL 192 (364)
Q Consensus 122 d~v~~~~~~~~~~~~~~~~------~~~~~~~l~~a~~~~~~---~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~~s 192 (364)
+.++|+++.........++ ....+.|+++++++.++ ++|||+||..|||.....+++|+++..|.++|+.+
T Consensus 81 ~~v~~~~a~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~E~~~~~P~~~Yg~s 160 (347)
T d1t2aa_ 81 TEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVKFYQASTSELYGKVQEIPQKETTPFYPRSPYGAA 160 (347)
T ss_dssp SEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGTCSCSSSSBCTTSCCCCCSHHHHH
T ss_pred ceeeeeeeccccchhhccchhhhhhHHHHHHHHHHHHHHcCCCCCcEEEEecchheecCCCCCCCCCCCCCCCCCHHHHH
Confidence 7888887654332222222 22345678888876654 48999999999998878889999999999999999
Q ss_pred HHHHHHHHHHhhhhcCCcEEEEEecceecCCCCh--H-----HHHHHh-cCcccccccccCCcccccccHHHHHHHHHHH
Q 017914 193 RLSAEKGWLNLGRDLGISAQVFRLGGIYGPGRSS--V-----DTIIKQ-LPLSEGQKMRRARQYTSRIHVDDICQVLSAS 264 (364)
Q Consensus 193 K~~~E~~~~~~~~~~~~~~~ilRp~~v~g~~~~~--~-----~~~~~~-~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~ 264 (364)
|.++|++++.+.++++++++++||+.+||+.... . ..+... .........+++.+.++|+|++|+++++..+
T Consensus 161 K~~aE~~~~~~~~~~~~~~~ilr~~~vyGp~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~g~~~r~~i~v~D~~~a~~~~ 240 (347)
T d1t2aa_ 161 KLYAYWIVVNFREAYNLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRDWGHAKDYVEAMWLM 240 (347)
T ss_dssp HHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCSCEEESCTTCEECCEEHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCEEEEEecceeCCCCCCCccccccceeeehhhcCCcceeecCCCcceeeeeEecHHHHHHHHH
Confidence 9999999999998899999999999999986432 1 111111 1111223457788999999999999999999
Q ss_pred ccCCCCCceEEEeCCCCCCHHHHHHHHHHHhcCCCCCcccCCC--C--CCC------CCCCccCCCCCCCeEEEchhHHH
Q 017914 265 IDKPSAWNVYNVVDDDPAPREEVFAYAWDLVEKKWPGLLKHRK--P--REN------TESSNEKGSSRGEKRVSNVRMKK 334 (364)
Q Consensus 265 l~~~~~g~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~--~--~~~------~~~~~~~~~~~~~~~~d~~k~~~ 334 (364)
+++... +.|+++.+...++.+..+.+....+..+........ . ... .....+.+.......+|++|+++
T Consensus 241 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rp~~~~~~~~d~skak~ 319 (347)
T d1t2aa_ 241 LQNDEP-EDFVIATGEVHSVREFVEKSFLHIGKTIVWEGKNENEVGRCKETGKVHVTVDLKYYRPTEVDFLQGDCTKAKQ 319 (347)
T ss_dssp HHSSSC-CCEEECCSCCEEHHHHHHHHHHHTTCCEEEESCGGGCEEEETTTCCEEEEECGGGSCSSCCCBCCBCCHHHHH
T ss_pred hhcCCC-ccceeccccccccchhhhhhhhhhcceeeecccchhhhhhhhhcCCceeeecccCCCCCCcCEeeECHHHHHH
Confidence 998755 478899989999999999999999876321110000 0 000 00001111223345679999999
Q ss_pred hcCcccCCCCHHHHHHHHHHHhcccC
Q 017914 335 ELGVRLWHPSYKSGLQSIINQMDQPY 360 (364)
Q Consensus 335 ~lG~~p~~~~~~e~l~~~~~~~~~~~ 360 (364)
+|||+|++ +|+|+|++++++..+.+
T Consensus 320 ~Lgw~P~~-sl~e~i~~~I~~~~~~~ 344 (347)
T d1t2aa_ 320 KLNWKPRV-AFDELVREMVHADVELM 344 (347)
T ss_dssp HHCCCCCS-CHHHHHHHHHHHHHHHH
T ss_pred HHCCCcCC-CHHHHHHHHHHHHHHHH
Confidence 99999999 89999999987665543
|
| >d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.1e-39 Score=293.47 Aligned_cols=292 Identities=15% Similarity=0.113 Sum_probs=217.4
Q ss_pred CCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCch----------h---hhhhhhCCceEEEccCChhhH--Hhh--c
Q 017914 58 SPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVM----------K---KKELEQSGFDVHLFNANETAL--MIL--T 119 (364)
Q Consensus 58 ~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~----------~---~~~l~~~~~~~~~~D~~~~~~--~~~--~ 119 (364)
|.+|||||| |||||++|+++|+++|++|++++|... . ...+...++.++.+|++|.+. ..+ .
T Consensus 1 M~kKILITG~tGfIGs~lv~~Ll~~g~~V~~ld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~ 80 (346)
T d1ek6a_ 1 MAEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKKY 80 (346)
T ss_dssp CCSEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHC
T ss_pred CCCeEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCccccccccchHHHHHHHHhcCCCcEEEEeecccccccccccccc
Confidence 457999999 999999999999999999999975211 1 112334678999999999774 334 3
Q ss_pred cCceeeEEEEecCCCCCCCChh------hhHHHHHHHHhhcCCccEEEEEccceeecCCCCccccCC-CCCCCCChhHHH
Q 017914 120 TLKNYTHLLVSIPPLEGTGDPM------LKHGELLRSTLMNGHLQWLGYLSSTGVYGHSGGAWVDED-YPANPTTELGRL 192 (364)
Q Consensus 120 ~~d~v~~~~~~~~~~~~~~~~~------~~~~~~l~~a~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~-~~~~~~~~Y~~s 192 (364)
..+.++|+|+..+......++. ...+.|++.+++..++++|||+||..+|+........+. ....+.++|+.+
T Consensus 81 ~~~~i~h~Aa~~~~~~~~~~p~~~~~~Nv~gt~~l~~~~~~~~v~~~i~~ss~~~~~~~~~~~~~~~~~~~~~~~~Y~~~ 160 (346)
T d1ek6a_ 81 SFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHGVKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKS 160 (346)
T ss_dssp CEEEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSSHHHHH
T ss_pred ccccccccccccCcHhhHhCHHHHHHhhhcccccccchhhhcCcccccccccceeeeccccccccccccccccCChHHHH
Confidence 4567889997644322222332 344567888888999999999999999987665443333 345678899999
Q ss_pred HHHHHHHHHHhhhh-cCCcEEEEEecceecCCCC-------------hHHHHHHh-----cCcc---cccccccCCcccc
Q 017914 193 RLSAEKGWLNLGRD-LGISAQVFRLGGIYGPGRS-------------SVDTIIKQ-----LPLS---EGQKMRRARQYTS 250 (364)
Q Consensus 193 K~~~E~~~~~~~~~-~~~~~~ilRp~~v~g~~~~-------------~~~~~~~~-----~~~~---~~~~~~~~~~~~~ 250 (364)
|..+|+.+.++++. .+++.+++|++.+||+... .+..+... ..+. .......+.+.++
T Consensus 161 k~~~e~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~g~~~~~~~g~~~Rd 240 (346)
T d1ek6a_ 161 KFFIEEMIRDLCQADKTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTEDGTGVRD 240 (346)
T ss_dssp HHHHHHHHHHHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHHTSSSCEEEECSCSSSSSSSCEEC
T ss_pred HHHHHHHHHHHHHhccCCceEEEeecceeccCCCCCcCccccccHHHHHHHHHHHHHcCCCcEEEcCCcccCCCCCeeEe
Confidence 99999999988765 4899999999999997532 22222221 1111 1123456888999
Q ss_pred cccHHHHHHHHHHHccC---CCCCceEEEeCCCCCCHHHHHHHHHHHhcCCCCCcccCCCCCCCCCCCccCCCCCCCeEE
Q 017914 251 RIHVDDICQVLSASIDK---PSAWNVYNVVDDDPAPREEVFAYAWDLVEKKWPGLLKHRKPRENTESSNEKGSSRGEKRV 327 (364)
Q Consensus 251 ~i~v~Dva~~~~~~l~~---~~~g~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (364)
|+|++|+|.++..++.. ...+++||+++++.+++.|+++.+.+.+|.+.+..... . .+.......+
T Consensus 241 fi~v~D~a~~~~~~~~~~~~~~~~~i~Ni~~~~~~s~~dl~~~i~~~~~~~~~~~~~~--------~---~~~e~~~~~~ 309 (346)
T d1ek6a_ 241 YIHVVDLAKGHIAALRKLKEQCGCRIYNLGTGTGYSVLQMVQAMEKASGKKIPYKVVA--------R---REGDVAACYA 309 (346)
T ss_dssp EEEHHHHHHHHHHHHHHHTTTCCEEEEEECCSCCEEHHHHHHHHHHHHCSCCCEEEEC--------C---CTTCCSEECB
T ss_pred EEEEEeccchhhhhccccccccCceEEEeCCCCcccHHHHHHHHHHHhCCCCCeEECC--------C---CCCCCCEeeE
Confidence 99999999999877544 33467999999999999999999999999875432111 0 1122334567
Q ss_pred EchhHHHhcCcccCCCCHHHHHHHHHHHhcccCC
Q 017914 328 SNVRMKKELGVRLWHPSYKSGLQSIINQMDQPYQ 361 (364)
Q Consensus 328 d~~k~~~~lG~~p~~~~~~e~l~~~~~~~~~~~~ 361 (364)
|++|+++.|||+|++ +++|+|+++++|+++|-+
T Consensus 310 d~~k~~~~lgw~p~~-slee~I~~~i~w~~~n~~ 342 (346)
T d1ek6a_ 310 NPSLAQEELGWTAAL-GLDRMCEDLWRWQKQNPS 342 (346)
T ss_dssp CCHHHHHTTCCCCCC-CHHHHHHHHHHHHHHCTT
T ss_pred CHHHHHHHHCCCcCC-CHHHHHHHHHHHHHhCHh
Confidence 999999999999999 899999999999998864
|
| >d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=1.2e-39 Score=295.30 Aligned_cols=290 Identities=14% Similarity=0.089 Sum_probs=216.4
Q ss_pred CeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchh-------hhhhhhCCceEEEccCChhhH--Hhh--ccCceeeEE
Q 017914 60 NRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMK-------KKELEQSGFDVHLFNANETAL--MIL--TTLKNYTHL 127 (364)
Q Consensus 60 ~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~-------~~~l~~~~~~~~~~D~~~~~~--~~~--~~~d~v~~~ 127 (364)
|.||||| |||||++|+++|+++|++|+++++.... ...+...+++++.+|++|.+. ..+ .++|+|+|+
T Consensus 2 K~ILVTGatGfIG~~lv~~Ll~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~d~Vihl 81 (347)
T d1z45a2 2 KIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCDRKGLEKVFKEYKIDSVIHF 81 (347)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHHTSCCCEEECCTTCHHHHHHHHHHSCCCEEEEC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCcCeEEEEECCCCcchhHHHhHHhhcccCCeEEEeecCCHHHHHHHHhccCCCEEEEc
Confidence 5799999 9999999999999999999999863221 222334689999999999774 334 378999999
Q ss_pred EEecCCCCCCCC------hhhhHHHHHHHHhhcCCccEEEEEccceeecCCC----CccccCCCCCCCCChhHHHHHHHH
Q 017914 128 LVSIPPLEGTGD------PMLKHGELLRSTLMNGHLQWLGYLSSTGVYGHSG----GAWVDEDYPANPTTELGRLRLSAE 197 (364)
Q Consensus 128 ~~~~~~~~~~~~------~~~~~~~~l~~a~~~~~~~r~v~~Ss~~vy~~~~----~~~~~E~~~~~~~~~Y~~sK~~~E 197 (364)
|+.........+ .....+.++++++++.+++||||+||..|||... ..+++|+.+..|.++|+.+|.++|
T Consensus 82 Aa~~~~~~~~~~~~~~~~~N~~~t~~ll~~~~~~~i~~~i~~SS~~vyg~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E 161 (347)
T d1z45a2 82 AGLKAVGESTQIPLRYYHNNILGTVVLLELMQQYNVSKFVFSSSATVYGDATRFPNMIPIPEECPLGPTNPYGHTKYAIE 161 (347)
T ss_dssp CSCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCCGGGSTTCCSBCTTSCCCCCSHHHHHHHHHH
T ss_pred cccccccccccCcccccccchhhhHHHHHHHHhcccceEEeecceeeecCcccCCCCCccccccCCCCCChhHhHHHHHH
Confidence 986543222122 2234456889999999999999999999998653 345888999999999999999999
Q ss_pred HHHHHhhh--hcCCcEEEEEecceecCCCC-------------hHHHHHHh-----cCcc---cccccccCCcccccccH
Q 017914 198 KGWLNLGR--DLGISAQVFRLGGIYGPGRS-------------SVDTIIKQ-----LPLS---EGQKMRRARQYTSRIHV 254 (364)
Q Consensus 198 ~~~~~~~~--~~~~~~~ilRp~~v~g~~~~-------------~~~~~~~~-----~~~~---~~~~~~~~~~~~~~i~v 254 (364)
++++++.+ ..+++++++|++.+||+... .+..+... .++. .+....++.+.+|++++
T Consensus 162 ~~~~~~~~~~~~~~~~~~lR~~~v~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~i~g~~~~~~~~~~~~d~~~~ 241 (347)
T d1z45a2 162 NILNDLYNSDKKSWKFAILRYFNPIGAHPSGLIGEDPLGIPNNLLPYMAQVAVGRREKLYIFGDDYDSRDGTPIRDYIHV 241 (347)
T ss_dssp HHHHHHHHHSTTSCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHTTSSSCCCCC------CCSSCEECEEEH
T ss_pred HHHHHHHHhhccCCcEEEEeecceEeecCCCccCCCccccHHHHHHHHHHHHhcCCCCeEEeCCCccccCCceeeeeeee
Confidence 99998864 35789999999999987421 23332222 1111 12223455677889999
Q ss_pred HHHHHHHHHHccCC-------CCCceEEEeCCCCCCHHHHHHHHHHHhcCCCCCcccCCCCCCCCCCCccCCCCCCCeEE
Q 017914 255 DDICQVLSASIDKP-------SAWNVYNVVDDDPAPREEVFAYAWDLVEKKWPGLLKHRKPRENTESSNEKGSSRGEKRV 327 (364)
Q Consensus 255 ~Dva~~~~~~l~~~-------~~g~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (364)
.|.+.+++.+++.. ..+++||+++++++|+.|+++.+.+.+|.+.+..... ..........+
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Ni~~~~~~s~~e~~~~i~~~~~~~~~~~~~~-----------~~~~~~~~~~~ 310 (347)
T d1z45a2 242 VDLAKGHIAALQYLEAYNENEGLCREWNLGSGKGSTVFEVYHAFCKASGIDLPYKVTG-----------RRAGDVLNLTA 310 (347)
T ss_dssp HHHHHHHHHHHHHHHHSCTTCCEEEEEEESCSCCEEHHHHHHHHHHHHTCCCCC--------------------CCCCCB
T ss_pred ecccccccccccccccccccccccccceecCCCcccHHHHHHHHHHHHCCCCceEeCC-----------CCCCCCCEeeE
Confidence 99999988877531 2368999999999999999999999999875432111 01112334568
Q ss_pred EchhHHHhcCcccCCCCHHHHHHHHHHHhcccCC
Q 017914 328 SNVRMKKELGVRLWHPSYKSGLQSIINQMDQPYQ 361 (364)
Q Consensus 328 d~~k~~~~lG~~p~~~~~~e~l~~~~~~~~~~~~ 361 (364)
|++|++++|||+|++ +++|+|+++++|+++|.+
T Consensus 311 d~sk~~~~lGw~p~~-~lee~i~~ti~w~~~np~ 343 (347)
T d1z45a2 311 KPDRAKRELKWQTEL-QVEDSCKDLWKWTTENPF 343 (347)
T ss_dssp CCHHHHHHTCCCCCC-CHHHHHHHHHHHHHHCTT
T ss_pred CHHHHHHHHCCCCCC-CHHHHHHHHHHHHHhChh
Confidence 999999999999999 899999999999999864
|
| >d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Trypanosoma brucei [TaxId: 5691]
Probab=100.00 E-value=7.8e-39 Score=293.69 Aligned_cols=293 Identities=13% Similarity=0.129 Sum_probs=217.9
Q ss_pred CCeEEEEc-CChhhHHHHHHHHh-CCCEEEEEEeCchh---------hh--------------hhhhCCceEEEccCChh
Q 017914 59 PNRMLILG-MGFVGRIFAEKIKN-QGWVVSGTCTNVMK---------KK--------------ELEQSGFDVHLFNANET 113 (364)
Q Consensus 59 ~~~vlVtG-tG~iG~~l~~~L~~-~g~~V~~~~r~~~~---------~~--------------~l~~~~~~~~~~D~~~~ 113 (364)
.||||||| +||||++|+++|++ .||+|+++++-... .. ......+.++.+|++|.
T Consensus 2 ~MKVLITG~tGfIGs~lv~~LL~~~~~~V~~~D~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~ 81 (383)
T d1gy8a_ 2 HMRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNE 81 (383)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCH
T ss_pred cCEEEEeCCCcHHHHHHHHHHHHhCCCEEEEEecCCcccccchhhhhhhhHHHHhhhhccccccccccceEEEECcccCH
Confidence 47999999 99999999999986 69999999851100 00 00113578999999997
Q ss_pred hH--Hhh---ccCceeeEEEEecCCCCCCCC------hhhhHHHHHHHHhhcCCccEEEEEccceeecCCCC-------c
Q 017914 114 AL--MIL---TTLKNYTHLLVSIPPLEGTGD------PMLKHGELLRSTLMNGHLQWLGYLSSTGVYGHSGG-------A 175 (364)
Q Consensus 114 ~~--~~~---~~~d~v~~~~~~~~~~~~~~~------~~~~~~~~l~~a~~~~~~~r~v~~Ss~~vy~~~~~-------~ 175 (364)
+. ..+ ..+|.|+|+|+.......... .....+.+++.+++..++++++++||..+|+.... .
T Consensus 82 ~~l~~~~~~~~~~d~ViH~Aa~~~~~~~~~~~~~~~~~N~~~t~~~l~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~ 161 (383)
T d1gy8a_ 82 DFLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLHKCDKIIFSSSAAIFGNPTMGSVSTNAE 161 (383)
T ss_dssp HHHHHHHHHSCCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGTBSCCC-----CCC
T ss_pred HHhhhhhhccceeehhhcccccccccccccccccccccccccccccchhhhccCCccccccccccccccccccccccccc
Confidence 64 333 467999999976543221111 22344568888888999999999999988875432 3
Q ss_pred cccCCCCCCCCChhHHHHHHHHHHHHHhhhhcCCcEEEEEecceecCCCCh----------------HHHHHHhcC----
Q 017914 176 WVDEDYPANPTTELGRLRLSAEKGWLNLGRDLGISAQVFRLGGIYGPGRSS----------------VDTIIKQLP---- 235 (364)
Q Consensus 176 ~~~E~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilRp~~v~g~~~~~----------------~~~~~~~~~---- 235 (364)
++.|+.+..|.++|+.+|..+|++++++.+.+|++++++|++.+||+.... +.+++....
T Consensus 162 ~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~~gl~~~~lR~~~vyG~~~~~~~~~~~~~~~~~ip~ii~~~~~~~~~~~~ 241 (383)
T d1gy8a_ 162 PIDINAKKSPESPYGESKLIAERMIRDCAEAYGIKGICLRYFNACGAHEDGDIGEHYQGSTHLIPIILGRVMSDIAPDQR 241 (383)
T ss_dssp CBCTTSCCBCSSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECCCTTSSCSCCSTTCCSHHHHHHHHHHHHHSCC--
T ss_pred ccccccCCCCCCHHHhhHhHHHHHHHHHHHHhCCCEEEEecceeeccCccccccccccccchhHHHHHHHHHhhcccccc
Confidence 577888889999999999999999999998899999999999999987431 122222100
Q ss_pred ------------c---ccccccccCCcccccccHHHHHHHHHHHccCC---------CCCceEEEeCCCCCCHHHHHHHH
Q 017914 236 ------------L---SEGQKMRRARQYTSRIHVDDICQVLSASIDKP---------SAWNVYNVVDDDPAPREEVFAYA 291 (364)
Q Consensus 236 ------------~---~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~---------~~g~~~~i~~~~~~s~~el~~~i 291 (364)
+ +.....++|.+.++|+|++|+|++++.+++.. ..+++||+++++++++.|+++.+
T Consensus 242 ~~~~~~~~~~~~~~i~g~~~~~~dg~~~Rdfi~v~D~~~a~~~~~~~~~~~~~~~~~~~~~i~Ni~s~~~~s~~el~~~i 321 (383)
T d1gy8a_ 242 LTIHEDASTDKRMPIFGTDYPTPDGTCVRDYVHVCDLASAHILALDYVEKLGPNDKSKYFSVFNLGTSRGYSVREVIEVA 321 (383)
T ss_dssp ---------CCCEEEECSCSSSTTSSCEECEEEHHHHHHHHHHHHHHHHTCCTTTGGGSEEEEEESCSCCEEHHHHHHHH
T ss_pred chhhhhhhcCCceEEeCCccccCCCCeEEeeEEHHHHHHHHHHHHhhhccccccccccCccEEEeCCCCceeHHHHHHHH
Confidence 0 11112345788999999999999999988631 23579999999999999999999
Q ss_pred HHHhcCCCCCcccCCCCCCCCCCCccCCCCCCCeEEEchhHHHhcCcccCCCCHHHHHHHH-HHHhcccCCCC
Q 017914 292 WDLVEKKWPGLLKHRKPRENTESSNEKGSSRGEKRVSNVRMKKELGVRLWHPSYKSGLQSI-INQMDQPYQCS 363 (364)
Q Consensus 292 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~e~l~~~-~~~~~~~~~~~ 363 (364)
.+.+|.+.+...... .........+|++|++++|||+|++ +++|+|+++ +.|+++|.+-|
T Consensus 322 ~~~~~~~~~~~~~~~-----------~~~d~~~~~~d~~k~~k~LGw~P~~-~l~e~i~~t~~~w~~~~~~~~ 382 (383)
T d1gy8a_ 322 RKTTGHPIPVRECGR-----------REGDPAYLVAASDKAREVLGWKPKY-DTLEAIMETSWKFQRTHPNGY 382 (383)
T ss_dssp HHHHCCCCCEEEECC-----------CTTCCSEECBCCHHHHHHTCCCCSC-CSHHHHHHHHHHHHHTCTTTT
T ss_pred HHHhCCCCceEECCC-----------CCCCcCEeeeCHHHHHHHHCCccCC-CHHHHHHHHHHHHHHhCcccC
Confidence 999998754322110 1112234567999999999999999 899999886 68999886544
|
| >d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=100.00 E-value=1.1e-38 Score=287.87 Aligned_cols=292 Identities=13% Similarity=0.117 Sum_probs=214.2
Q ss_pred CCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchh-----hhh-------hhhCCceEEEccCChhhH--Hhh--ccC
Q 017914 59 PNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMK-----KKE-------LEQSGFDVHLFNANETAL--MIL--TTL 121 (364)
Q Consensus 59 ~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~-----~~~-------l~~~~~~~~~~D~~~~~~--~~~--~~~ 121 (364)
+|+||||| |||||++|+++|+++||+|++++|..+. ... .....+.++.+|+++.+. ..+ ..+
T Consensus 1 ~k~~LVTGatGfiG~~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~ 80 (339)
T d1n7ha_ 1 RKIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVIKP 80 (339)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHHCC
T ss_pred CCEEEEeCCccHHHHHHHHHHHHCcCEEEEEECCCcccchhhhhhhhhhhhhccccceEEEEccccCHHHHHHHHhhhcc
Confidence 47899999 9999999999999999999999995431 111 122457789999999663 333 567
Q ss_pred ceeeEEEEecCCCCCCCChhh------hHHHHHHHHhhc-----CCccEEEEEccceeecCCCCccccCCCCCCCCChhH
Q 017914 122 KNYTHLLVSIPPLEGTGDPML------KHGELLRSTLMN-----GHLQWLGYLSSTGVYGHSGGAWVDEDYPANPTTELG 190 (364)
Q Consensus 122 d~v~~~~~~~~~~~~~~~~~~------~~~~~l~~a~~~-----~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~ 190 (364)
|.|+|+|+.........++.. ....+++.+++. ....++++.||..+|+... .+++|+++..|.+.|+
T Consensus 81 D~Vih~Aa~~~~~~~~~~p~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~ss~~~~~~~~-~~~~E~~~~~p~~~Y~ 159 (339)
T d1n7ha_ 81 DEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGSTP-PPQSETTPFHPRSPYA 159 (339)
T ss_dssp SEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGTTSC-SSBCTTSCCCCCSHHH
T ss_pred chhhhccccccccccccCccccccccccccchhhhhhhhcccccccceeeeecccceecccCC-CCCCCCCCCCCcchhh
Confidence 999999976443322222222 223455555542 3345788888887776554 4589999999999999
Q ss_pred HHHHHHHHHHHHhhhhcCCcEEEEEecceecCCCC--hH-HHH---HHhc--CcccccccccCCcccccccHHHHHHHHH
Q 017914 191 RLRLSAEKGWLNLGRDLGISAQVFRLGGIYGPGRS--SV-DTI---IKQL--PLSEGQKMRRARQYTSRIHVDDICQVLS 262 (364)
Q Consensus 191 ~sK~~~E~~~~~~~~~~~~~~~ilRp~~v~g~~~~--~~-~~~---~~~~--~~~~~~~~~~~~~~~~~i~v~Dva~~~~ 262 (364)
.+|..+|.++..+.+.++++++++||+++||+... .. ..+ .... ........+++.+.++|+|++|+|+++.
T Consensus 160 ~sK~~~E~~~~~~~~~~~~~~~ilR~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~~~~~rd~~~v~D~a~~~~ 239 (339)
T d1n7ha_ 160 ASKCAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRALGRIKVGLQTKLFLGNLQASRDWGFAGDYVEAMW 239 (339)
T ss_dssp HHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCCCEEESCTTCEEECEEHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhCCCEEEEEEccccCCCCCCCCCcchhhHHHHHHhcCCCCeEEeCCCCccccceeeehHHHHHH
Confidence 99999999999999999999999999999998643 11 111 1111 1111223467889999999999999999
Q ss_pred HHccCCCCCceEEEeCCCCCCHHHHHHHHHHHhcCCCCCcccCCCCCCCCCCCccCCCCCCCeEEEchhHHHhcCcccCC
Q 017914 263 ASIDKPSAWNVYNVVDDDPAPREEVFAYAWDLVEKKWPGLLKHRKPRENTESSNEKGSSRGEKRVSNVRMKKELGVRLWH 342 (364)
Q Consensus 263 ~~l~~~~~g~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~ 342 (364)
.+++++..+ .++++.+...++.++++.+.+.+|......+.. ......+.......+|++|++++|||+|++
T Consensus 240 ~~~~~~~~~-~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~-------~~~~~r~~~~~~~~~d~~Kak~~LGw~P~~ 311 (339)
T d1n7ha_ 240 LMLQQEKPD-DYVVATEEGHTVEEFLDVSFGYLGLNWKDYVEI-------DQRYFRPAEVDNLQGDASKAKEVLGWKPQV 311 (339)
T ss_dssp HHHTSSSCC-EEEECCSCEEEHHHHHHHHHHHTTCCGGGTEEE-------CGGGSCSSCCCBCCBCCHHHHHHHCCCCCS
T ss_pred HHHhcCCCC-ccccccccccccchhhhhhhhhhhcccCceeee-------ccCCCCCCCCCeeeECHHHHHHHHCCCcCC
Confidence 999988665 566777888999999999999998764322211 011111222334567999999999999999
Q ss_pred CCHHHHHHHHHHHhcccC
Q 017914 343 PSYKSGLQSIINQMDQPY 360 (364)
Q Consensus 343 ~~~~e~l~~~~~~~~~~~ 360 (364)
+|+|+|+++++|+.++.
T Consensus 312 -~le~gi~~ti~~~~~~~ 328 (339)
T d1n7ha_ 312 -GFEKLVKMMVDEDLELA 328 (339)
T ss_dssp -CHHHHHHHHHHHHHHHH
T ss_pred -CHHHHHHHHHHHHHHHH
Confidence 89999999999998764
|
| >d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=7.6e-38 Score=279.54 Aligned_cols=275 Identities=14% Similarity=0.110 Sum_probs=205.9
Q ss_pred CCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCChhhH--Hhh--ccCceeeEEEEecCC
Q 017914 59 PNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETAL--MIL--TTLKNYTHLLVSIPP 133 (364)
Q Consensus 59 ~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~--~~~--~~~d~v~~~~~~~~~ 133 (364)
+||||||| |||||++|+++|+++|+.|+++++..+ .|+.+.+. ..+ ..+|.|+|+++..+.
T Consensus 2 kkkIlITG~tGfiG~~l~~~L~~~g~~vi~~~~~~~--------------~~~~~~~~~~~~~~~~~~d~v~~~a~~~~~ 67 (315)
T d1e6ua_ 2 KQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRDE--------------LNLLDSRAVHDFFASERIDQVYLAAAKVGG 67 (315)
T ss_dssp CEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTTT--------------CCTTCHHHHHHHHHHHCCSEEEECCCCCCC
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCcCEEEEecCchh--------------ccccCHHHHHHHHhhcCCCEEEEcchhccc
Confidence 57999999 999999999999999999987765421 46777553 333 457999998865443
Q ss_pred CCC-CC------ChhhhHHHHHHHHhhcCCccEEEEEccceeecCCCCccccCCCCCC-----CCChhHHHHHHHHHHHH
Q 017914 134 LEG-TG------DPMLKHGELLRSTLMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPAN-----PTTELGRLRLSAEKGWL 201 (364)
Q Consensus 134 ~~~-~~------~~~~~~~~~l~~a~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~-----~~~~Y~~sK~~~E~~~~ 201 (364)
... .. ......+.|++.++++.+++||||+||.+|||.....+++|+.+.. +.++|+.+|.++|++++
T Consensus 68 ~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~v~~~i~~SS~~vyg~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~~~~ 147 (315)
T d1e6ua_ 68 IVANNTYPADFIYQNMMIESNIIHAAHQNDVNKLLFLGSSCIYPKLAKQPMAESELLQGTLEPTNEPYAIAKIAGIKLCE 147 (315)
T ss_dssp HHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECCGGGSCTTCCSSBCGGGTTSSCCCGGGHHHHHHHHHHHHHHH
T ss_pred cccchhhHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECCceEcCCCCCCCccCCccccCCCCCCCCHHHHHHHHHHHHHH
Confidence 210 11 1233455688889989999999999999999988777788876442 34579999999999999
Q ss_pred HhhhhcCCcEEEEEecceecCCCCh-------HHHHH-----H-hcCcccccccccCCcccccccHHHHHHHHHHHccCC
Q 017914 202 NLGRDLGISAQVFRLGGIYGPGRSS-------VDTII-----K-QLPLSEGQKMRRARQYTSRIHVDDICQVLSASIDKP 268 (364)
Q Consensus 202 ~~~~~~~~~~~ilRp~~v~g~~~~~-------~~~~~-----~-~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~ 268 (364)
.+.+++|++++++||+++||+++.. ...+. . ..........+++.+.++|+|++|+++++..++...
T Consensus 148 ~~~~~~gl~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~~~v~d~~~~~~~~~~~~ 227 (315)
T d1e6ua_ 148 SYNRQYGRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQKAPDVVVWGSGTPMREFLHVDDMAAASIHVMELA 227 (315)
T ss_dssp HHHHHHCCEEEEEEECEEESTTCCCCTTCSSHHHHHHHHHHHHHHHTCSEEEEESCSCCEECEEEHHHHHHHHHHHHHSC
T ss_pred HHHHHhCCCEEEEeeccEECCCCCCCccccccceeeeccchhhhhccCCceEEcCCCceEEEEEEeehhHHHHHHhhhhc
Confidence 9998999999999999999986431 11111 1 111111223466788899999999999999988654
Q ss_pred C---------CCceEEEeCCCCCCHHHHHHHHHHHhcCCCCCcccCCCCCCCCCCCccCCCCCCCeEEEchhHHHhcCcc
Q 017914 269 S---------AWNVYNVVDDDPAPREEVFAYAWDLVEKKWPGLLKHRKPRENTESSNEKGSSRGEKRVSNVRMKKELGVR 339 (364)
Q Consensus 269 ~---------~g~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~ 339 (364)
. ....++++.+...++.++++.+.+.+|.+.. +.+. ... ........+|++|++ +|||+
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~i~~~~~~~~~--i~~~-----~~~----~~~~~~~~~d~sk~k-~Lg~~ 295 (315)
T d1e6ua_ 228 HEVWLENTQPMLSHINVGTGVDCTIRELAQTIAKVVGYKGR--VVFD-----ASK----PDGTPRKLLDVTRLH-QLGWY 295 (315)
T ss_dssp HHHHHHTSBTTBCCEEESCSCCEEHHHHHHHHHHHHTCCSE--EEEE-----TTS----CCCCSBCCBCCHHHH-HTTCC
T ss_pred cccccccccccccccccCCCcchHHHHHHHHHHHHhCCCcc--eEEC-----CCC----CCCCceeccCHHHHH-HcCCC
Confidence 2 2468999999999999999999999998732 2110 001 112223467999996 69999
Q ss_pred cCCCCHHHHHHHHHHHhcccC
Q 017914 340 LWHPSYKSGLQSIINQMDQPY 360 (364)
Q Consensus 340 p~~~~~~e~l~~~~~~~~~~~ 360 (364)
|++ +++|+|+++++||++|.
T Consensus 296 p~~-~l~e~i~~ti~w~~~N~ 315 (315)
T d1e6ua_ 296 HEI-SLEAGLASTYQWFLENQ 315 (315)
T ss_dssp CCC-CHHHHHHHHHHHHHHTC
T ss_pred CCC-CHHHHHHHHHHHHHHcC
Confidence 999 89999999999999873
|
| >d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sulfolipid biosynthesis protein SQD1 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=100.00 E-value=9.8e-37 Score=280.60 Aligned_cols=293 Identities=14% Similarity=0.100 Sum_probs=204.9
Q ss_pred CCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCch-----------------h------hhhhhhCCceEEEccCChhh
Q 017914 59 PNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVM-----------------K------KKELEQSGFDVHLFNANETA 114 (364)
Q Consensus 59 ~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~-----------------~------~~~l~~~~~~~~~~D~~~~~ 114 (364)
+||||||| |||||++|+++|+++||+|++++.-.. . ...+...+++++.+|++|.+
T Consensus 1 g~kILVTGatGfiG~~lv~~Ll~~g~~V~~iDnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~ 80 (393)
T d1i24a_ 1 GSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDICDFE 80 (393)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCTTSHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEecCCcccccccccccccccccchHHHHHHHHhhcCCCcEEEEccCCCHH
Confidence 58999999 999999999999999999999972100 0 00112257899999999977
Q ss_pred H--Hhhc--cCceeeEEEEecCCCCCCCC---------hhhhHHHHHHHHhhcCCcc-EEEEEccceeecCCCCc-----
Q 017914 115 L--MILT--TLKNYTHLLVSIPPLEGTGD---------PMLKHGELLRSTLMNGHLQ-WLGYLSSTGVYGHSGGA----- 175 (364)
Q Consensus 115 ~--~~~~--~~d~v~~~~~~~~~~~~~~~---------~~~~~~~~l~~a~~~~~~~-r~v~~Ss~~vy~~~~~~----- 175 (364)
. .+++ ++|.|+|+|+......+..+ .....+.|+++++++.+++ ++++.||..+|+.....
T Consensus 81 ~l~~~~~~~~~d~ViHlAa~~~~~~s~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~~i~~ss~~~~~~~~~~~~~~~ 160 (393)
T d1i24a_ 81 FLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFGEECHLVKLGTMGEYGTPNIDIEEGY 160 (393)
T ss_dssp HHHHHHHHHCCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGGCCCSSCBCSSE
T ss_pred HHHHHHHhhcchheeccccccccccccccccccccccccccccccHHHHHHHHhccccceeecccccccccccccccccc
Confidence 4 5554 46999999976443322222 2234466888888765554 67788888888754321
Q ss_pred -cc-------cCCCCCCCCChhHHHHHHHHHHHHHhhhhcCCcEEEEEecceecCCCCh--------------------H
Q 017914 176 -WV-------DEDYPANPTTELGRLRLSAEKGWLNLGRDLGISAQVFRLGGIYGPGRSS--------------------V 227 (364)
Q Consensus 176 -~~-------~E~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilRp~~v~g~~~~~--------------------~ 227 (364)
.. ++..+..|.+.|+.+|..+|.++..+.++.+++++++||+.+||+.... +
T Consensus 161 ~~~~~~~~~~~~~~~~~p~~~Y~~sK~~aE~~~~~~~~~~~l~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~i 240 (393)
T d1i24a_ 161 ITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVKTDETEMHEELRNRLDYDAVFGTAL 240 (393)
T ss_dssp EEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECSCCTTGGGSGGGCCCCCCSTTTCCHH
T ss_pred ccccccccccccccccccccHHHHHhhhhcccccccccccceeeeecccccccCCCccccccccccccccccccccccch
Confidence 11 1224667889999999999999999999999999999999999987431 2
Q ss_pred HHHHHhcCcccc-cccccCCcccccccHHHHHHHHHHHccCCCCCceEEE--eCCCCCCHHHHHHHHHHHhcCCCCC-cc
Q 017914 228 DTIIKQLPLSEG-QKMRRARQYTSRIHVDDICQVLSASIDKPSAWNVYNV--VDDDPAPREEVFAYAWDLVEKKWPG-LL 303 (364)
Q Consensus 228 ~~~~~~~~~~~~-~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~~g~~~~i--~~~~~~s~~el~~~i~~~~g~~~~~-~~ 303 (364)
..+......... ...+++.+.++|+|++|++++++.++++...++.|++ .+++.+|+.|+++.+.+..+..... ..
T Consensus 241 ~~~~~~~~~~~~~~i~g~~~~~rd~v~v~D~~~a~~~~~~~~~~~g~~~~~~~~~~~~si~el~~~i~~~~~~~~~~~~~ 320 (393)
T d1i24a_ 241 NRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVEIAIANPAKAGEFRVFNQFTEQFSVNELASLVTKAGSKLGLDVKK 320 (393)
T ss_dssp HHHHHHHHHTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHSCCCTTCEEEEEECSEEEEHHHHHHHHHHHHHTTTCCCCE
T ss_pred hhhhHHhhcCCeeEEeeecccccccccccchHHHHHHHHHhhcccceeeeecCCCCeeEHHHHHHHHHHHHHhhCCCcce
Confidence 223222111111 2236788999999999999999999998755434433 3456799999999999886532111 11
Q ss_pred cCCCCCCCCCCCccCCCCCCCeEEEchhHHHhcCcccCCCCHHHHHHHHHHHhcccC
Q 017914 304 KHRKPRENTESSNEKGSSRGEKRVSNVRMKKELGVRLWHPSYKSGLQSIINQMDQPY 360 (364)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~e~l~~~~~~~~~~~ 360 (364)
.. ...+ ..+........|++|++ +|||+|++ +++++++++++|++++.
T Consensus 321 ~~------~~~~-~~~~~~~~~~~d~~k~~-~LGw~P~~-~~~~~i~~~~~~~~~~k 368 (393)
T d1i24a_ 321 MT------VPNP-RVEAEEHYYNAKHTKLM-ELGLEPHY-LSDSLLDSLLNFAVQFK 368 (393)
T ss_dssp EE------ECCS-SCSCSSCCCCBCCCHHH-HTTCCCCC-CCHHHHHHHHHHHHHTG
T ss_pred ee------ccCC-CCCCCccEecCCHHHHH-HcCCcccc-CHHHHHHHHHHHHHHHH
Confidence 11 0001 12223344567899997 69999999 89999999999987654
|
| >d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Aldehyde reductase II species: Sporobolomyces salmonicolor [TaxId: 5005]
Probab=100.00 E-value=7e-35 Score=263.03 Aligned_cols=286 Identities=13% Similarity=0.083 Sum_probs=200.0
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhh--------CCceEEEccCChhhH--HhhccCceee
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQ--------SGFDVHLFNANETAL--MILTTLKNYT 125 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~--------~~~~~~~~D~~~~~~--~~~~~~d~v~ 125 (364)
..+++||||| +||||++|+++|+++||+|++++|+..+...+.. .....+.+|+.|.+. .++.++|.|+
T Consensus 9 ~~gk~VlVTG~sGfIGs~l~~~Ll~~G~~V~~~vR~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~v~ 88 (342)
T d1y1pa1 9 PEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIKGAAGVA 88 (342)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTTTCSEEE
T ss_pred CCcCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCchhHHHHHHhhhccccccccEEEeccccchhhhhhhcccchhhh
Confidence 4578999999 9999999999999999999999998766544321 223457789998764 6778999999
Q ss_pred EEEEecCCCCCCC---ChhhhHHHHHHHHhhc-CCccEEEEEccceeecC-C---CCcc----------------ccCCC
Q 017914 126 HLLVSIPPLEGTG---DPMLKHGELLRSTLMN-GHLQWLGYLSSTGVYGH-S---GGAW----------------VDEDY 181 (364)
Q Consensus 126 ~~~~~~~~~~~~~---~~~~~~~~~l~~a~~~-~~~~r~v~~Ss~~vy~~-~---~~~~----------------~~E~~ 181 (364)
|+++......... ......+.|+++++.+ .++++|||+||..+++. . .... ..|+.
T Consensus 89 ~~a~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~~~v~~~i~~SS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~e~~ 168 (342)
T d1y1pa1 89 HIASVVSFSNKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTSSTVSALIPKPNVEGIYLDEKSWNLESIDKAKTLPESD 168 (342)
T ss_dssp ECCCCCSCCSCHHHHHHHHHHHHHHHHHHHHTCTTCCEEEEECCGGGTCCCCTTCCCCEECTTCCCHHHHHHHHHSCTTS
T ss_pred hhcccccccccccccccchhhhHHHHHHhhhcccccccccccccceeeccCCCCCCCccccccccccccccccccccccC
Confidence 9998765433211 1233446788887766 47999999999754321 1 1111 23445
Q ss_pred CCCCCChhHHHHHHHHHHHHHhhhhc--CCcEEEEEecceecCCCC------hHHHHHHhcCcccccccccCCccccccc
Q 017914 182 PANPTTELGRLRLSAEKGWLNLGRDL--GISAQVFRLGGIYGPGRS------SVDTIIKQLPLSEGQKMRRARQYTSRIH 253 (364)
Q Consensus 182 ~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~ilRp~~v~g~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 253 (364)
+..|.++|+.+|..+|++++.+.+++ +++++++||+.+||+... .+..++....-........+.+.++|+|
T Consensus 169 ~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~~i~p~~v~Gp~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~v~ 248 (342)
T d1y1pa1 169 PQKSLWVYAASKTEAELAAWKFMDENKPHFTLNAVLPNYTIGTIFDPETQSGSTSGWMMSLFNGEVSPALALMPPQYYVS 248 (342)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHHHHCCSSEEEEEEESEEECCCSCTTTCCCHHHHHHHHHHTTCCCHHHHTCCSEEEEE
T ss_pred CCCCcCcccchhHhHHHHHHHhhhhcccccccceecccceeCCCCCccccccchHHHHHHHHcCCcCcccCCccceeeee
Confidence 55677889999999999999998765 477899999999998522 2222332211111111223456688999
Q ss_pred HHHHHHHHHHHccCCCCCceEEEeCCCCCCHHHHHHHHHHHhcC-CCCCcccCCCCCCCCCCCccCCCCCCCeEEE---c
Q 017914 254 VDDICQVLSASIDKPSAWNVYNVVDDDPAPREEVFAYAWDLVEK-KWPGLLKHRKPRENTESSNEKGSSRGEKRVS---N 329 (364)
Q Consensus 254 v~Dva~~~~~~l~~~~~g~~~~i~~~~~~s~~el~~~i~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d---~ 329 (364)
++|+|++++.+++++..+..|++++++.++++|++++|.+.++. +++..... .......++ .
T Consensus 249 v~Dva~~~i~~l~~~~~~g~~~~~~~~~~t~~eia~~i~k~~p~~~~~~~~~~--------------~~~~~~~~~~~~s 314 (342)
T d1y1pa1 249 AVDIGLLHLGCLVLPQIERRRVYGTAGTFDWNTVLATFRKLYPSKTFPADFPD--------------QGQDLSKFDTAPS 314 (342)
T ss_dssp HHHHHHHHHHHHHCTTCCSCEEEECCEEECHHHHHHHHHHHCTTSCCCCCCCC--------------CCCCCCEECCHHH
T ss_pred HHHHHHHHHHhhcCccccceEEEEcCCceEHHHHHHHHHHHcCCCcCCccCCc--------------cCcccccccchHH
Confidence 99999999999998877667888999999999999999998732 22211111 011112222 2
Q ss_pred hhHHHhcCcccCCCCHHHHHHHHHHHhc
Q 017914 330 VRMKKELGVRLWHPSYKSGLQSIINQMD 357 (364)
Q Consensus 330 ~k~~~~lG~~p~~~~~~e~l~~~~~~~~ 357 (364)
.+..+.|||.+++ +++|+|+++++..+
T Consensus 315 ~~~~k~lg~~~~~-~lee~i~d~I~s~~ 341 (342)
T d1y1pa1 315 LEILKSLGRPGWR-SIEESIKDLVGSET 341 (342)
T ss_dssp HHHHHHTTCCSCC-CHHHHHHHHHCCSC
T ss_pred HHHHHHcCCCCCc-CHHHHHHHHHHhCc
Confidence 3344579999998 79999999987654
|
| >d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-tyvelose-2-epimerase species: Salmonella typhi [TaxId: 90370]
Probab=100.00 E-value=5.4e-35 Score=263.23 Aligned_cols=286 Identities=16% Similarity=0.101 Sum_probs=207.7
Q ss_pred eEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCc--hhhh---hh-hhCCceEEEccCChhhH--Hhhcc--CceeeEEEE
Q 017914 61 RMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNV--MKKK---EL-EQSGFDVHLFNANETAL--MILTT--LKNYTHLLV 129 (364)
Q Consensus 61 ~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~--~~~~---~l-~~~~~~~~~~D~~~~~~--~~~~~--~d~v~~~~~ 129 (364)
|||||| |||||++|+++|+++||+|+++++-. .... .+ ...+++++.+|++|.+. .++++ +|.|+|+|+
T Consensus 2 KILVTGatGfIGs~lv~~Ll~~g~~V~~id~~~~~~~~~~~~~~~~~~~~~~i~~Di~~~~~l~~~~~~~~~d~Vih~aa 81 (338)
T d1orra_ 2 KLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRNKNDVTRLITKYMPDSCFHLAG 81 (338)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHCCSEEEECCC
T ss_pred EEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhHHHHhhccCCcEEEEcccCCHHHHHHHHHhcCCceEEeecc
Confidence 799999 99999999999999999999997521 1111 12 12678999999999764 55544 599999997
Q ss_pred ecCCCCCCCC------hhhhHHHHHHHHhhcCCccEEEEEccceee-cCCCCc----------------cccCCCCCCCC
Q 017914 130 SIPPLEGTGD------PMLKHGELLRSTLMNGHLQWLGYLSSTGVY-GHSGGA----------------WVDEDYPANPT 186 (364)
Q Consensus 130 ~~~~~~~~~~------~~~~~~~~l~~a~~~~~~~r~v~~Ss~~vy-~~~~~~----------------~~~E~~~~~~~ 186 (364)
.........+ .....+.|+++++...+++++|+.||..++ +..... ...+..+..|.
T Consensus 82 ~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~i~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (338)
T d1orra_ 82 QVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSNCNIIYSSTNKVYGDLEQYKYNETETRYTCVDKPNGYDESTQLDFH 161 (338)
T ss_dssp CCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEEEGGGGTTCTTSCEEECSSCEEETTCTTCBCTTSCCCCC
T ss_pred cccccccccChHHHHHHHHHHHHHHHHhhhcccccccccccccccccccccccccccccccccccccccCcccCCccccc
Confidence 6543222112 234556788888888888877777665544 332221 13345566788
Q ss_pred ChhHHHHHHHHHHHHHhhhhcCCcEEEEEecceecCCCC------hHHHHH----Hhc-Ccc-cccccccCCcccccccH
Q 017914 187 TELGRLRLSAEKGWLNLGRDLGISAQVFRLGGIYGPGRS------SVDTII----KQL-PLS-EGQKMRRARQYTSRIHV 254 (364)
Q Consensus 187 ~~Y~~sK~~~E~~~~~~~~~~~~~~~ilRp~~v~g~~~~------~~~~~~----~~~-~~~-~~~~~~~~~~~~~~i~v 254 (364)
+.|+.+|...|.++..+.+.++....++|+..+|++... .+..+. ... ... .....++|.+.++|+|+
T Consensus 162 ~~y~~~k~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~r~~~~v 241 (338)
T d1orra_ 162 SPYGCSKGAADQYMLDYARIFGLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKNGINKPFTISGNGKQVRDVLHA 241 (338)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTCCCBTTBCHHHHHHHHHHHHHTTCCCCEEEESSSCCEEECEEH
T ss_pred cccccccchhhhhhhhhhhccCcccccccccceeeccccccccccccchhhHHHHHHHhccCCceEEeCCCceeEeeecc
Confidence 999999999999999999889999999999999976521 222222 211 111 12234678899999999
Q ss_pred HHHHHHHHHHccCCC--CCceEEEeCC--CCCCHHHHHHHHHHHhcCCCCCcccCCCCCCCCCCCccCCCCCCCeEEEch
Q 017914 255 DDICQVLSASIDKPS--AWNVYNVVDD--DPAPREEVFAYAWDLVEKKWPGLLKHRKPRENTESSNEKGSSRGEKRVSNV 330 (364)
Q Consensus 255 ~Dva~~~~~~l~~~~--~g~~~~i~~~--~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 330 (364)
+|++++++.++++.. .|++|++..+ ..+++.|+++.+.+.+|.+.+..... ..........+|++
T Consensus 242 ~D~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~-----------~~~~~~~~~~~d~~ 310 (338)
T d1orra_ 242 EDMISLYFTALANVSKIRGNAFNIGGTIVNSLSLLELFKLLEDYCNIDMRFTNLP-----------VRESDQRVFVADIK 310 (338)
T ss_dssp HHHHHHHHHHHHTHHHHTTCEEEESSCGGGEEEHHHHHHHHHHHHTCCCCEEEEC-----------CCSSCCSEECBCCH
T ss_pred cchhhHHHHHHhccccccCccccccccccccccHHHHHHHHHHHHCCCceeEeCC-----------CCCCCcCeeeECHH
Confidence 999999999998753 4789998554 56899999999999999874321111 01122333567999
Q ss_pred hHHHhcCcccCCCCHHHHHHHHHHHhcc
Q 017914 331 RMKKELGVRLWHPSYKSGLQSIINQMDQ 358 (364)
Q Consensus 331 k~~~~lG~~p~~~~~~e~l~~~~~~~~~ 358 (364)
|++++|||+|++ +++|+|+++++|++.
T Consensus 311 k~~~~Lg~~p~~-sl~e~i~~ti~W~k~ 337 (338)
T d1orra_ 311 KITNAIDWSPKV-SAKDGVQKMYDWTSS 337 (338)
T ss_dssp HHHHHHCCCCCS-CHHHHHHHHHHHHHH
T ss_pred HHHHHHCCCcCC-CHHHHHHHHHHHHHc
Confidence 999999999999 899999999999974
|
| >d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: DTDP-4-dehydrorhamnose reductase RfbD species: Clostridium acetobutylicum [TaxId: 1488]
Probab=100.00 E-value=4.6e-35 Score=256.96 Aligned_cols=268 Identities=15% Similarity=0.098 Sum_probs=201.4
Q ss_pred CeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCChhhH--Hhhc--cCceeeEEEEecCCC
Q 017914 60 NRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETAL--MILT--TLKNYTHLLVSIPPL 134 (364)
Q Consensus 60 ~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~--~~~~--~~d~v~~~~~~~~~~ 134 (364)
||||||| |||||++|+++|.++||+|++++|+. +|+.|.+. ..+. ..|.|+|+++.....
T Consensus 2 MKIlItGasGfiG~~l~~~L~~~g~~Vi~~~r~~---------------~D~~d~~~~~~~l~~~~~d~vih~a~~~~~~ 66 (281)
T d1vl0a_ 2 MKILITGANGQLGREIQKQLKGKNVEVIPTDVQD---------------LDITNVLAVNKFFNEKKPNVVINCAAHTAVD 66 (281)
T ss_dssp EEEEEESTTSHHHHHHHHHHTTSSEEEEEECTTT---------------CCTTCHHHHHHHHHHHCCSEEEECCCCCCHH
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCEEEEeechh---------------ccCCCHHHHHHHHHHcCCCEEEeeccccccc
Confidence 7899999 99999999999999999999999853 47777653 4443 579999988754332
Q ss_pred CCCCChhh------hHHHHHHHHhhcCCccEEEEEccceeecCCCCccccCCCCCCCCChhHHHHHHHHHHHHHhhhhcC
Q 017914 135 EGTGDPML------KHGELLRSTLMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANPTTELGRLRLSAEKGWLNLGRDLG 208 (364)
Q Consensus 135 ~~~~~~~~------~~~~~l~~a~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~ 208 (364)
.....+.. ....++...+... ...++++||..+|+.....+.+|.++..+...|+.+|...|.++++ .+
T Consensus 67 ~~~~~~~~~~~~n~~~~~~~~~~~~~~-~~~~~~~ss~~v~~~~~~~~~~e~~~~~~~~~~~~~k~~~e~~~~~----~~ 141 (281)
T d1vl0a_ 67 KCEEQYDLAYKINAIGPKNLAAAAYSV-GAEIVQISTDYVFDGEAKEPITEFDEVNPQSAYGKTKLEGENFVKA----LN 141 (281)
T ss_dssp HHHHCHHHHHHHHTHHHHHHHHHHHHH-TCEEEEEEEGGGSCSCCSSCBCTTSCCCCCSHHHHHHHHHHHHHHH----HC
T ss_pred cccccchhhcccccccccccccccccc-cccccccccceeeeccccccccccccccchhhhhhhhhHHHHHHHH----hC
Confidence 21111111 1122344444443 4578888999999988888899999999999999999999998864 46
Q ss_pred CcEEEEEecceecCCCChHHHHHHhcCcccccccccCCcccccccHHHHHHHHHHHccCCCCCceEEEeCCCCCCHHHHH
Q 017914 209 ISAQVFRLGGIYGPGRSSVDTIIKQLPLSEGQKMRRARQYTSRIHVDDICQVLSASIDKPSAWNVYNVVDDDPAPREEVF 288 (364)
Q Consensus 209 ~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~~g~~~~i~~~~~~s~~el~ 288 (364)
.+++++||+++||++.++...+....... ......+++.++++|++|+++++..++++...| +||+++++.+|+.|++
T Consensus 142 ~~~~i~R~~~vyG~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~v~D~~~~~~~~~~~~~~g-~~~~~~~~~~s~~e~~ 219 (281)
T d1vl0a_ 142 PKYYIVRTAWLYGDGNNFVKTMINLGKTH-DELKVVHDQVGTPTSTVDLARVVLKVIDEKNYG-TFHCTCKGICSWYDFA 219 (281)
T ss_dssp SSEEEEEECSEESSSSCHHHHHHHHHHHC-SEEEEESSCEECCEEHHHHHHHHHHHHHHTCCE-EEECCCBSCEEHHHHH
T ss_pred CCccccceeEEeCCCcccccchhhhhccC-CceeecCCceeccchhhhhhhhhhhhhhhcccC-ceeEeCCCccchHHHH
Confidence 78999999999999988766555442111 112233568899999999999999999987766 9999999999999999
Q ss_pred HHHHHHhcCCCCCcccCCCCCCCCCCCccCCCCCCCeEEEchhHHHhcCcccCCCCHHHHHHHHHHHhc
Q 017914 289 AYAWDLVEKKWPGLLKHRKPRENTESSNEKGSSRGEKRVSNVRMKKELGVRLWHPSYKSGLQSIINQMD 357 (364)
Q Consensus 289 ~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~e~l~~~~~~~~ 357 (364)
+.+.+.+|.+.. ..+.+. ...+. ...++....+|++|+++.|||+|+ +|+|+|++++++++
T Consensus 220 ~~i~~~~g~~~~-i~~i~~----~~~~~-~a~rp~~~~ld~~k~~~~~g~~~~--~~~~~l~~~l~~l~ 280 (281)
T d1vl0a_ 220 VEIFRLTGIDVK-VTPCTT----EEFPR-PAKRPKYSVLRNYMLELTTGDITR--EWKESLKEYIDLLQ 280 (281)
T ss_dssp HHHHHHHCCCCE-EEEECS----TTSCC-SSCCCSBCCBCCHHHHHTTCCCCC--BHHHHHHHHHHHHT
T ss_pred HHHHHHhCCCce-EEeccH----HHcCC-cCCCccccccCHHHHHHHhCCCCC--CHHHHHHHHHHHhc
Confidence 999999998743 222110 11111 111334456899999999999987 79999999999986
|
| >d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-glucose-4,6-dehydratase species: Yersinia pseudotuberculosis [TaxId: 633]
Probab=100.00 E-value=1.5e-34 Score=262.33 Aligned_cols=292 Identities=14% Similarity=0.088 Sum_probs=208.6
Q ss_pred CCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhh-----hCCceEEEccCChhhH--Hhh--ccCceeeEE
Q 017914 58 SPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELE-----QSGFDVHLFNANETAL--MIL--TTLKNYTHL 127 (364)
Q Consensus 58 ~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~-----~~~~~~~~~D~~~~~~--~~~--~~~d~v~~~ 127 (364)
.+||||||| |||||++|+++|+++||+|++++|+......+. ..+++++.+|++|++. ..+ ..++.|+|+
T Consensus 7 ~~KkILVTG~tGfIGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~l~~~~~~~~~~~v~~~ 86 (356)
T d1rkxa_ 7 QGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVADGMQSEIGDIRDQNKLLESIREFQPEIVFHM 86 (356)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTTTTTTSEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCccHHHHhhhhcccCCeEEEeeccChHhhhhhhhhchhhhhhhh
Confidence 458999999 999999999999999999999999776543321 2579999999999774 444 456899998
Q ss_pred EEecCCCCCCCChh------hhHHHHHHHHhhcC-CccEEEEEccceeecC-CCCccccCCCCCCCCChhHHHHHHHHHH
Q 017914 128 LVSIPPLEGTGDPM------LKHGELLRSTLMNG-HLQWLGYLSSTGVYGH-SGGAWVDEDYPANPTTELGRLRLSAEKG 199 (364)
Q Consensus 128 ~~~~~~~~~~~~~~------~~~~~~l~~a~~~~-~~~r~v~~Ss~~vy~~-~~~~~~~E~~~~~~~~~Y~~sK~~~E~~ 199 (364)
++......+...+. .....|+++++... +.+.+++.|+..++.. ....+.+|+.+..|.++|+.+|...|..
T Consensus 87 aa~~~~~~~~~~~~~~~~~Nv~g~~n~l~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~p~~~y~~~k~~~e~~ 166 (356)
T d1rkxa_ 87 AAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNITSDKCYDNKEWIWGYRENEAMGGYDPYSNSKGCAELV 166 (356)
T ss_dssp CSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHCCCCEEEEECCGGGBCCCCSSSCBCTTSCBCCSSHHHHHHHHHHHH
T ss_pred hccccccccccCCccccccccccchhhhhhhhccccccccccccccccccccccccccccccccCCCCccccccccchhh
Confidence 87543322222222 23356777777654 4555666666555543 3345677888889999999999999998
Q ss_pred HHHhhh---------hcCCcEEEEEecceecCCCC----hHHHHHHhcCcccccccccCCcccccccHHHHHHHHHHHcc
Q 017914 200 WLNLGR---------DLGISAQVFRLGGIYGPGRS----SVDTIIKQLPLSEGQKMRRARQYTSRIHVDDICQVLSASID 266 (364)
Q Consensus 200 ~~~~~~---------~~~~~~~ilRp~~v~g~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~ 266 (364)
+..+.. ..++.++++||+.+||+++. ++..+.....-......+.+.+.++++|++|++.+++.++.
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~r~~~vyGp~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~D~~~a~~~~~~ 246 (356)
T d1rkxa_ 167 TSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWALDRIVPDILRAFEQSQPVIIRNPHAIRPWQHVLEPLSGYLLLAQ 246 (356)
T ss_dssp HHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCCCSSCHHHHHHHHHHTTCCEECSCTTCEECCEETHHHHHHHHHHHH
T ss_pred hhHHhhhcccchhccccCceEEeccCCCeeCCCcchhhHHHHHHHHHHhCCCceEEeeccccccccccccccchhhhhhh
Confidence 887654 34788999999999998752 33434433222222334667889999999999999998887
Q ss_pred CCCC-----CceE--EEeCCCCCCHHHHHHHHHHHhcCCCCCcccCCCCCCCCCCCccCCCCCCCeEEEchhHHHhcCcc
Q 017914 267 KPSA-----WNVY--NVVDDDPAPREEVFAYAWDLVEKKWPGLLKHRKPRENTESSNEKGSSRGEKRVSNVRMKKELGVR 339 (364)
Q Consensus 267 ~~~~-----g~~~--~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~ 339 (364)
+... +... +...+..+++.++++.+.+.+|......... ...+.......+|++|++++|||+
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~----------~~~~~~~~~~~~d~skak~~LGw~ 316 (356)
T d1rkxa_ 247 KLYTDGAEYAEGWNFGPNDADATPVKNIVEQMVKYWGEGASWQLDG----------NAHPHEAHYLKLDCSKAKMQLGWH 316 (356)
T ss_dssp HHHHTCGGGCSEEECCCCGGGCEEHHHHHHHHHHHHCTTCCEEC-----------------CCCCCCBCCHHHHHHHCCC
T ss_pred hhcccccccccccccccccccccccchhhhhhHHHhCCCccEEEcC----------CCCCCCcCeeeEcHHHHHHHHCCC
Confidence 6421 2233 3334567999999999999998763321111 011122344568999999999999
Q ss_pred cCCCCHHHHHHHHHHHhcccC
Q 017914 340 LWHPSYKSGLQSIINQMDQPY 360 (364)
Q Consensus 340 p~~~~~~e~l~~~~~~~~~~~ 360 (364)
|++ +++|+|+++++||++.+
T Consensus 317 P~~-~l~egi~~ti~wyk~~~ 336 (356)
T d1rkxa_ 317 PRW-NLNTTLEYIVGWHKNWL 336 (356)
T ss_dssp CCC-CHHHHHHHHHHHHHHHH
T ss_pred cCC-CHHHHHHHHHHHHHHHH
Confidence 999 89999999999998754
|
| >d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: ADP-L-glycero-D-mannoheptose 6-epimerase species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=3.5e-32 Score=241.24 Aligned_cols=284 Identities=12% Similarity=0.100 Sum_probs=182.4
Q ss_pred EEEEc-CChhhHHHHHHHHhCCC-EEEEEEeCchh--hhhhhhCCce-EEE-ccCChhhH--HhhccCceeeEEEEecCC
Q 017914 62 MLILG-MGFVGRIFAEKIKNQGW-VVSGTCTNVMK--KKELEQSGFD-VHL-FNANETAL--MILTTLKNYTHLLVSIPP 133 (364)
Q Consensus 62 vlVtG-tG~iG~~l~~~L~~~g~-~V~~~~r~~~~--~~~l~~~~~~-~~~-~D~~~~~~--~~~~~~d~v~~~~~~~~~ 133 (364)
||||| +||||++|+++|+++|+ +|+++++-... ...+.+..+. ... .|..+... ..+..++.|+|+++....
T Consensus 2 ILITGgsGfIGs~lv~~L~~~g~~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~aa~~~~ 81 (307)
T d1eq2a_ 2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLVDLNIADYMDKEDFLIQIMAGEEFGDVEAIFHEGACSST 81 (307)
T ss_dssp EEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGGGHHHHTSCCSEEEEHHHHHHHHHTTCCCSSCCEEEECCSCCCT
T ss_pred EEEecCccHHHHHHHHHHHhCCCCeEEEEECCCCcchhhcccccchhhhccchHHHHHHhhhhcccchhhhhhhcccccc
Confidence 89998 99999999999999995 79998743222 2222211211 111 11111111 233556788888765443
Q ss_pred CCCCC----ChhhhHHHHHHHHhhcCCccEEEEEccceeecCCCCccccCCCCCCCCChhHHHHHHHHHHHHHhhhhcCC
Q 017914 134 LEGTG----DPMLKHGELLRSTLMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANPTTELGRLRLSAEKGWLNLGRDLGI 209 (364)
Q Consensus 134 ~~~~~----~~~~~~~~~l~~a~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~ 209 (364)
..... ........+++.++...+++ +|+.||..+|.........|+.+..|.+.|+.+|..+|.+++.+.+++++
T Consensus 82 ~~~~~~~~~~~~~~~~~~~l~~~~~~~i~-~v~~ss~~~~~~~~~~~~~~~~~~~~~~~Y~~~K~~~e~~~~~~~~~~~~ 160 (307)
T d1eq2a_ 82 TEWDGKYMMDNNYQYSKELLHYCLEREIP-FLYASSAATYGGRTSDFIESREYEKPLNVYGYSKFLFDEYVRQILPEANS 160 (307)
T ss_dssp TCCCHHHHHHHTHHHHHHHHHHHHHHTCC-EEEEEEGGGGTTCCSCBCSSGGGCCCSSHHHHHHHHHHHHHHHHGGGCSS
T ss_pred ccccccccccccccccccccccccccccc-ccccccccccccccccccccccccccccccccccchhhhhcccccccccc
Confidence 32211 12223445777777777776 66666666666555555666777788999999999999999999999999
Q ss_pred cEEEEEecceecCCCCh-------HHHHHHhcCccc--ccccccCCcccccccHHHHHHHHHHHccCCCCCceEEEeCCC
Q 017914 210 SAQVFRLGGIYGPGRSS-------VDTIIKQLPLSE--GQKMRRARQYTSRIHVDDICQVLSASIDKPSAWNVYNVVDDD 280 (364)
Q Consensus 210 ~~~ilRp~~v~g~~~~~-------~~~~~~~~~~~~--~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~~g~~~~i~~~~ 280 (364)
+++++||+.+||+.... ...+........ ....+.+.+.++|+|++|++.++..++++... +.||+++++
T Consensus 161 ~~~~~r~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~r~~~~v~d~~~~~~~~~~~~~~-~~~~~~~~~ 239 (307)
T d1eq2a_ 161 QIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLWFLENGVS-GIFNLGTGR 239 (307)
T ss_dssp CEEEEEECEEESSSCGGGGGGSCHHHHHHHHHHC-------------CBCEEEHHHHHHHHHHHHHHCCC-EEEEESCSC
T ss_pred ccccccceeEeeccccccccccccccccccccccccceeeecCccceeeeeeecccHHHHHHHHhhhccc-ccccccccc
Confidence 99999999999987431 222222211111 11225677889999999999999999987654 599999999
Q ss_pred CCCHHHHHHHHHHHhcCCCCCcccCCCCCCCCCCCccCCCCCCCeEEEchhHHHhcCcccCCCCHHHHHHHHHHHh
Q 017914 281 PAPREEVFAYAWDLVEKKWPGLLKHRKPRENTESSNEKGSSRGEKRVSNVRMKKELGVRLWHPSYKSGLQSIINQM 356 (364)
Q Consensus 281 ~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~e~l~~~~~~~ 356 (364)
..+++|+++++.+..+...-...+.+ .............|++|+++.+||+|++ +++|+|+++++|+
T Consensus 240 ~~si~~i~~~i~~~~~~~~i~~~~~~--------~~~~~~~~~~~~~d~~k~~~~~~~~p~~-sl~egi~~~i~w~ 306 (307)
T d1eq2a_ 240 AESFQAVADATLAYHKKGQIEYIPFP--------DKLKGRYQAFTQADLTNLRAAGYDKPFK-TVAEGVTEYMAWL 306 (307)
T ss_dssp CBCHHHHHHHC-----------------------------CCCSCCBCCHHHHHTTCCCCCC-CHHHHHHHHHHHT
T ss_pred chhHHHHHHHHHHhcCCCCeeEeeCC--------ccCCCCCceeeecCHHHHHHHHCCCCCC-CHHHHHHHHHHhC
Confidence 99999999999887654311111110 0011122233456899999999999999 8999999999996
|
| >d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) species: Salmonella enterica serovar typhimurium [TaxId: 90371]
Probab=99.97 E-value=3e-31 Score=234.26 Aligned_cols=279 Identities=15% Similarity=0.206 Sum_probs=192.1
Q ss_pred CeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCChhhH--Hhhc--cCceeeEEEEecCCC
Q 017914 60 NRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETAL--MILT--TLKNYTHLLVSIPPL 134 (364)
Q Consensus 60 ~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~--~~~~--~~d~v~~~~~~~~~~ 134 (364)
||||||| |||||++|+++|.++|+.|. +++.... +.+|++|.+. ..++ ++|.|+|+|+.....
T Consensus 1 MKILItG~tGfiG~~l~~~L~~~g~~v~-~~~~~~~-----------~~~Dl~~~~~~~~~i~~~~~D~Vih~Aa~~~~~ 68 (298)
T d1n2sa_ 1 MNILLFGKTGQVGWELQRSLAPVGNLIA-LDVHSKE-----------FCGDFSNPKGVAETVRKLRPDVIVNAAAHTAVD 68 (298)
T ss_dssp CEEEEECTTSHHHHHHHHHTTTTSEEEE-ECTTCSS-----------SCCCTTCHHHHHHHHHHHCCSEEEECCCCCCHH
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCEEE-EECCCcc-----------ccCcCCCHHHHHHHHHHcCCCEEEEeccccccc
Confidence 7899999 99999999999999987554 4443221 2478988663 4454 469999999765433
Q ss_pred CCCCCh------hhhHHHHHHHHhhcCCccEEEEEccceeecCCCCccccCCCCCCCCChhHHHHHHHHHHHHHhhhhcC
Q 017914 135 EGTGDP------MLKHGELLRSTLMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANPTTELGRLRLSAEKGWLNLGRDLG 208 (364)
Q Consensus 135 ~~~~~~------~~~~~~~l~~a~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~ 208 (364)
....++ ......++..+++..++ +++++||..+|+.....+.+|+.+..|.+.|+.+|..+|.+++.+..
T Consensus 69 ~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~~ss~~~~~~~~~~~~~E~~~~~p~~~y~~~k~~~e~~~~~~~~--- 144 (298)
T d1n2sa_ 69 KAESEPELAQLLNATSVEAIAKAANETGA-WVVHYSTDYVFPGTGDIPWQETDATSPLNVYGKTKLAGEKALQDNCP--- 144 (298)
T ss_dssp HHTTCHHHHHHHHTHHHHHHHHHHTTTTC-EEEEEEEGGGSCCCTTCCBCTTSCCCCSSHHHHHHHHHHHHHHHHCS---
T ss_pred ccccCccccccccccccccchhhhhcccc-ccccccccccccCCCCCCCccccccCCCchHhhhhhhhhhhHHhhhc---
Confidence 223333 23345678888877765 68889999999888888899999999999999999999999876543
Q ss_pred CcEEEEEeccee-cCCCChHHHHHHhcCcccccccccCCcccccccHHHHHHHHHHHcc----CCCCCceEEEeCCCCCC
Q 017914 209 ISAQVFRLGGIY-GPGRSSVDTIIKQLPLSEGQKMRRARQYTSRIHVDDICQVLSASID----KPSAWNVYNVVDDDPAP 283 (364)
Q Consensus 209 ~~~~ilRp~~v~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~----~~~~g~~~~i~~~~~~s 283 (364)
...++|++..+ +.+......+...... .......+.+..+++|++|+++++..++. ....+++||+++++.++
T Consensus 145 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~d~~~~~~~~i~~~~~~~~~~~~~n~~~~~~~~ 222 (298)
T d1n2sa_ 145 -KHLIFRTSWVYAGKGNNFAKTMLRLAKE-RQTLSVINDQYGAPTGAELLADCTAHAIRVALNKPEVAGLYHLVAGGTTT 222 (298)
T ss_dssp -SEEEEEECSEECSSSCCHHHHHHHHHHH-CSEEEEECSCEECCEEHHHHHHHHHHHHHHHHHCGGGCEEEECCCBSCEE
T ss_pred -ccccccccceeeccCCccchhhhhhhcc-cceeecccceeecccccchHHHHHHHHHhhhhccccccccccccCCCcee
Confidence 45666666555 4454444333322111 11112234567889999999999988775 33457899999999999
Q ss_pred HHHHHHHHHHHhcCCCCCc-ccCCCCCCCCCCCccCCCCCCCeEEEchhHHHhcCcccCCCCHHHHHHHHHHHhccc
Q 017914 284 REEVFAYAWDLVEKKWPGL-LKHRKPRENTESSNEKGSSRGEKRVSNVRMKKELGVRLWHPSYKSGLQSIINQMDQP 359 (364)
Q Consensus 284 ~~el~~~i~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~e~l~~~~~~~~~~ 359 (364)
+.|+++.+.+..+...... .....+......+ ....++....+|++|+++.|||+|+ +|+|+|+++++++..+
T Consensus 223 ~~~~~~~i~~~~~~~~~~~~~~~~~~i~~~~~~-~~a~RP~~~~ld~~K~~~~~~~~~~--~~~~gl~~~i~~~~~~ 296 (298)
T d1n2sa_ 223 WHDYAALVFDEARKAGITLALTELNAVPTSAYP-TPASRPGNSRLNTEKFQRNFDLILP--QWELGVKRMLTEMFTT 296 (298)
T ss_dssp HHHHHHHHHHHHHHHTCCCCCCEEEEECSTTSC-CSSCCCSBCCBCCHHHHHHHTCCCC--BHHHHHHHHHHHHHSC
T ss_pred cHHHHHHHHhhhhccCccccccceeeeehhhcC-ccCCCccccccCHHHHHHHHCCCCC--cHHHHHHHHHHHHHhh
Confidence 9999999988775431110 0000000000000 0112334456899999999999986 7999999999998764
|
| >d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Biliverdin IX beta reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.95 E-value=2.7e-27 Score=197.17 Aligned_cols=199 Identities=10% Similarity=-0.024 Sum_probs=155.9
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCChhhH--HhhccCceeeEEEEecCC
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETAL--MILTTLKNYTHLLVSIPP 133 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~--~~~~~~d~v~~~~~~~~~ 133 (364)
+.|+||+||| ||+||++++++|+++||+|++++|++.+.......+++++.+|++|.+. +++.++|+|+|+++....
T Consensus 1 m~~kkIlV~GatG~iG~~v~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~gD~~d~~~l~~al~~~d~vi~~~g~~~~ 80 (205)
T d1hdoa_ 1 MAVKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEGPRPAHVVVGDVLQAADVDKTVAGQDAVIVLLGTRND 80 (205)
T ss_dssp CCCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSSSCCCSEEEESCTTSHHHHHHHHTTCSEEEECCCCTTC
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEEcChhhcccccccccccccccccchhhHHHHhcCCCEEEEEeccCCc
Confidence 3578999999 9999999999999999999999999888776666889999999999774 788999999999875433
Q ss_pred CCCCCChhhhHHHHHHHHhhcCCccEEEEEccceeecCCCCccccCCCCCCCCChhHHHHHHHHHHHHHhhhhcCCcEEE
Q 017914 134 LEGTGDPMLKHGELLRSTLMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANPTTELGRLRLSAEKGWLNLGRDLGISAQV 213 (364)
Q Consensus 134 ~~~~~~~~~~~~~~l~~a~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~i 213 (364)
.. ..+.......|+++++++.+++|||++||.++++.....+ .....|...|..+|++++ +.++++++
T Consensus 81 ~~-~~~~~~~~~~~l~~aa~~~~v~r~i~~ss~~~~~~~~~~~-------~~~~~~~~~~~~~e~~l~----~~~~~~ti 148 (205)
T d1hdoa_ 81 LS-PTTVMSEGARNIVAAMKAHGVDKVVACTSAFLLWDPTKVP-------PRLQAVTDDHIRMHKVLR----ESGLKYVA 148 (205)
T ss_dssp CS-CCCHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCTTCSC-------GGGHHHHHHHHHHHHHHH----HTCSEEEE
T ss_pred hh-hhhhhHHHHHHHHHHHHhcCCCeEEEEeeeeccCCCcccc-------ccccccchHHHHHHHHHH----hcCCceEE
Confidence 22 2334556678999999999999999999988876543321 123468888999998775 46899999
Q ss_pred EEecceecCCCChHHHHHHhcCcccccccccCCcccccccHHHHHHHHHHHccCCCC-CceEEEeC
Q 017914 214 FRLGGIYGPGRSSVDTIIKQLPLSEGQKMRRARQYTSRIHVDDICQVLSASIDKPSA-WNVYNVVD 278 (364)
Q Consensus 214 lRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~~-g~~~~i~~ 278 (364)
|||+.+++.... ........+.....+|+++|+|++++.+++++.. |+.+.+..
T Consensus 149 irp~~~~~~~~~-----------~~~~~~~~~~~~~~~i~~~DvA~~~~~~l~~~~~~g~~~~~s~ 203 (205)
T d1hdoa_ 149 VMPPHIGDQPLT-----------GAYTVTLDGRGPSRVISKHDLGHFMLRCLTTDEYDGHSTYPSH 203 (205)
T ss_dssp ECCSEEECCCCC-----------SCCEEESSSCSSCSEEEHHHHHHHHHHTTSCSTTTTCEEEEEC
T ss_pred EecceecCCCCc-----------ccEEEeeCCCCCCCcCCHHHHHHHHHHHhCCCCCCCEEEecCC
Confidence 999999875321 1111223345567789999999999999998864 88777654
|
| >d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Pinoresinol-lariciresinol reductase species: Giant arborvitae (Thuja plicata) [TaxId: 3316]
Probab=99.93 E-value=7.5e-26 Score=200.46 Aligned_cols=226 Identities=13% Similarity=0.033 Sum_probs=163.1
Q ss_pred CCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhh--------hhhhhCCceEEEccCChhhH--HhhccCceeeEE
Q 017914 59 PNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKK--------KELEQSGFDVHLFNANETAL--MILTTLKNYTHL 127 (364)
Q Consensus 59 ~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~--------~~l~~~~~~~~~~D~~~~~~--~~~~~~d~v~~~ 127 (364)
++|||||| |||||++|+++|+++||+|++++|+.... ..+...+++++.+|++|.+. ..+.+.+.++++
T Consensus 3 k~KILVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~~v~~v~~d~~d~~~~~~~~~~~~~~~~~ 82 (312)
T d1qyda_ 3 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQRLVDALKQVDVVISA 82 (312)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCHHHHHHHHTTCSEEEEC
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCcccchhHHHHHhhhccCCcEEEEeecccchhhhhhccCcchhhhh
Confidence 57899999 99999999999999999999999965432 12344789999999999774 777888998888
Q ss_pred EEecCCCCCCCChhhhHHHHHHHHhhcCCccEEEEEccceeecCCCCccccCCCCCCCCChhHHHHHHHHHHHHHhhhhc
Q 017914 128 LVSIPPLEGTGDPMLKHGELLRSTLMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANPTTELGRLRLSAEKGWLNLGRDL 207 (364)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~~sK~~~E~~~~~~~~~~ 207 (364)
++.... ........+++.++...+..++++.||.+++.. .+..+..+...|...|..++++. ...
T Consensus 83 ~~~~~~-----~~~~~~~~~~l~~a~~~~~~~~v~~Ss~g~~~~------~~~~~~~~~~~~~~~~~~~~~~~----~~~ 147 (312)
T d1qyda_ 83 LAGGVL-----SHHILEQLKLVEAIKEAGNIKRFLPSEFGMDPD------IMEHALQPGSITFIDKRKVRRAI----EAA 147 (312)
T ss_dssp CCCSSS-----STTTTTHHHHHHHHHHSCCCSEEECSCCSSCTT------SCCCCCSSTTHHHHHHHHHHHHH----HHT
T ss_pred hhhccc-----ccchhhhhHHHHHHHHhcCCcEEEEeeccccCC------CcccccchhhhhhHHHHHHHHhh----ccc
Confidence 754222 222333456666777666677888887665432 22334445566777776666554 456
Q ss_pred CCcEEEEEecceecCCCChHHHHHHhc--CcccccccccCCcccccccHHHHHHHHHHHccCCCC-Cce-EEEeCCCCCC
Q 017914 208 GISAQVFRLGGIYGPGRSSVDTIIKQL--PLSEGQKMRRARQYTSRIHVDDICQVLSASIDKPSA-WNV-YNVVDDDPAP 283 (364)
Q Consensus 208 ~~~~~ilRp~~v~g~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~~-g~~-~~i~~~~~~s 283 (364)
+++++++||+.+||+....+..+.... .......++.+++.++|||++|+|++++.++.++.. ++. |++++++.+|
T Consensus 148 ~~~~~i~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~l~~~~~~~~~~~~~~~~~~~s 227 (312)
T d1qyda_ 148 SIPYTYVSSNMFAGYFAGSLAQLDGHMMPPRDKVLIYGDGNVKGIWVDEDDVGTYTIKSIDDPQTLNKTMYIRPPMNILS 227 (312)
T ss_dssp TCCBCEEECCEEHHHHTTTSSCTTCCSSCCSSEECCBTTSCSEEEEECHHHHHHHHHHHTTCGGGSSSEEECCCGGGEEE
T ss_pred ccceEEeccceeecCCccchhhHHHHhhhcccccccccccccccceeeHHHHHHHHHHHhcCccccCceEEEeCCCcCCC
Confidence 899999999999996543322111111 111223456788999999999999999999988744 555 5666667899
Q ss_pred HHHHHHHHHHHhcCCC
Q 017914 284 REEVFAYAWDLVEKKW 299 (364)
Q Consensus 284 ~~el~~~i~~~~g~~~ 299 (364)
++|+++.+.+++|.+.
T Consensus 228 ~~e~~~~~~~~~g~~~ 243 (312)
T d1qyda_ 228 QKEVIQIWERLSEQNL 243 (312)
T ss_dssp HHHHHHHHHHHHTCCC
T ss_pred HHHHHHHHHHHHCCCC
Confidence 9999999999999874
|
| >d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: TAT-interacting protein TIP30 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.93 E-value=6.7e-26 Score=192.31 Aligned_cols=201 Identities=13% Similarity=0.090 Sum_probs=145.5
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCC--EEEEEEeCchhhhhhhhCCceEEEccCChhhH--HhhccCceeeEEEEec
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGW--VVSGTCTNVMKKKELEQSGFDVHLFNANETAL--MILTTLKNYTHLLVSI 131 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~--~~~~~~d~v~~~~~~~ 131 (364)
+++++||||| |||||++|+++|+++|+ +|++++|++.+........+....+|+.+.+. ..+.++|.++|+++..
T Consensus 12 m~~k~IlItGaTG~iG~~l~~~Ll~~g~~~~v~~~~R~~~~~~~~~~~~i~~~~~D~~~~~~~~~~~~~~d~vi~~~~~~ 91 (232)
T d2bkaa1 12 MQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAYKNVNQEVVDFEKLDDYASAFQGHDVGFCCLGTT 91 (232)
T ss_dssp HTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGGGGGCEEEECCGGGGGGGGGGGSSCSEEEECCCCC
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHhCCCCCEEEEEecChhhhcccccceeeeeeeccccccccccccccccccccccccc
Confidence 4557999999 99999999999999984 89999998765444444678888899998653 7788999999988642
Q ss_pred CCCC---CCCChhhhHHHHHHHHhhcCCccEEEEEccceeecCCCCccccCCCCCCCCChhHHHHHHHHHHHHHhhhhcC
Q 017914 132 PPLE---GTGDPMLKHGELLRSTLMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANPTTELGRLRLSAEKGWLNLGRDLG 208 (364)
Q Consensus 132 ~~~~---~~~~~~~~~~~~l~~a~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~ 208 (364)
.... .+.........++.+++...++++|||+||.++++. +.+.|+.+|..+|+.+++. +
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~a~~~~v~~fi~~Ss~~~~~~-------------~~~~Y~~~K~~~E~~l~~~----~ 154 (232)
T d2bkaa1 92 RGKAGAEGFVRVDRDYVLKSAELAKAGGCKHFNLLSSKGADKS-------------SNFLYLQVKGEVEAKVEEL----K 154 (232)
T ss_dssp HHHHHHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCTT-------------CSSHHHHHHHHHHHHHHTT----C
T ss_pred ccccchhhhhhhcccccceeeecccccCccccccCCccccccC-------------ccchhHHHHHHhhhccccc----c
Confidence 1110 011222345578888999999999999999876533 2367999999999988753 5
Q ss_pred C-cEEEEEecceecCCCCh--HHHHHHhcCcccccccccCCcccccccHHHHHHHHHHHccCCCCCceEEEeC
Q 017914 209 I-SAQVFRLGGIYGPGRSS--VDTIIKQLPLSEGQKMRRARQYTSRIHVDDICQVLSASIDKPSAWNVYNVVD 278 (364)
Q Consensus 209 ~-~~~ilRp~~v~g~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~~g~~~~i~~ 278 (364)
+ +++|+||+.+||+.... ...+.... +. .+.........|+++|+|++++.++.++..++.+.+.+
T Consensus 155 ~~~~~IlRP~~i~G~~~~~~~~~~~~~~~-~~---~~~~~~~~~~~I~~~dvA~a~i~~~~~~~~~~~~i~~~ 223 (232)
T d2bkaa1 155 FDRYSVFRPGVLLCDRQESRPGEWLVRKF-FG---SLPDSWASGHSVPVVTVVRAMLNNVVRPRDKQMELLEN 223 (232)
T ss_dssp CSEEEEEECCEEECTTGGGSHHHHHHHHH-HC---SCCTTGGGGTEEEHHHHHHHHHHHHTSCCCSSEEEEEH
T ss_pred ccceEEecCceeecCCCcCcHHHHHHHHH-hh---ccCCcccCCCeEEHHHHHHHHHHHHhcCccCCeEEEcH
Confidence 4 48999999999987542 22222211 00 11112223345999999999999998887777777754
|
| >d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Phenylcoumaran benzylic ether reductase species: Loblolly pine (Pinus taeda) [TaxId: 3352]
Probab=99.92 E-value=7e-26 Score=199.83 Aligned_cols=222 Identities=14% Similarity=0.096 Sum_probs=162.3
Q ss_pred CCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhh---------hhhhCCceEEEccCChhhH--HhhccCceee
Q 017914 58 SPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKK---------ELEQSGFDVHLFNANETAL--MILTTLKNYT 125 (364)
Q Consensus 58 ~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~---------~l~~~~~~~~~~D~~~~~~--~~~~~~d~v~ 125 (364)
.+||||||| |||||++++++|+++||+|++++|+..... .+...+++++.+|+.+... ..+.+.+.|+
T Consensus 2 ~kkKILVtGatG~iG~~l~~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~vi 81 (307)
T d1qyca_ 2 SRSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVEAVKNVDVVI 81 (307)
T ss_dssp CCCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHHHHHHHHHTCSEEE
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEECCCccccchhHHHHHHhhccCCcEEEEeecccchhhhhhhhhceeee
Confidence 468999999 999999999999999999999999765432 2234678999999999774 6778889998
Q ss_pred EEEEecCCCCCCCChhhhHHHHHHHHhhcCCccEEEEEccceeecCCCCccccCCCCCCCCChhHHHHHHHHHHHHHhhh
Q 017914 126 HLLVSIPPLEGTGDPMLKHGELLRSTLMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANPTTELGRLRLSAEKGWLNLGR 205 (364)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~~sK~~~E~~~~~~~~ 205 (364)
|.+.. .......++..++...+++++++.|+.+.+. ++.....+...+...+...+.++.
T Consensus 82 ~~~~~---------~~~~~~~~~~~a~~~~~~~~~~~~s~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~---- 141 (307)
T d1qyca_ 82 STVGS---------LQIESQVNIIKAIKEVGTVKRFFPSEFGNDV-------DNVHAVEPAKSVFEVKAKVRRAIE---- 141 (307)
T ss_dssp ECCCG---------GGSGGGHHHHHHHHHHCCCSEEECSCCSSCT-------TSCCCCTTHHHHHHHHHHHHHHHH----
T ss_pred ecccc---------cccchhhHHHHHHHHhccccceeeecccccc-------ccccccccccccccccccccchhh----
Confidence 87743 2233456777788877888899888754332 222222333455566666665554
Q ss_pred hcCCcEEEEEecceecCCCChHHHHHHh-cCcccccccccCCcccccccHHHHHHHHHHHccCCCC-Cc-eEEEeCCCCC
Q 017914 206 DLGISAQVFRLGGIYGPGRSSVDTIIKQ-LPLSEGQKMRRARQYTSRIHVDDICQVLSASIDKPSA-WN-VYNVVDDDPA 282 (364)
Q Consensus 206 ~~~~~~~ilRp~~v~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~~-g~-~~~i~~~~~~ 282 (364)
..+++++++||+.+||+....+..+... ........++.+++.++|||++|+|++++.+++++.. ++ +|++++++.+
T Consensus 142 ~~~~~~~i~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~~~~~~~~~~~~~~~~ 221 (307)
T d1qyca_ 142 AEGIPYTYVSSNCFAGYFLRSLAQAGLTAPPRDKVVILGDGNARVVFVKEEDIGTFTIKAVDDPRTLNKTLYLRLPANTL 221 (307)
T ss_dssp HHTCCBEEEECCEEHHHHTTTTTCTTCSSCCSSEEEEETTSCCEEEEECHHHHHHHHHTTSSCGGGTTEEEECCCGGGEE
T ss_pred ccCCCceecccceecCCCccchhhhhhhhhhcccceeeecccccccCCcHHHHHHHHHHHhcChhhcCceeEEeCCCCcc
Confidence 5688999999999999765443222211 1111223456788999999999999999999998743 44 5666777899
Q ss_pred CHHHHHHHHHHHhcCCC
Q 017914 283 PREEVFAYAWDLVEKKW 299 (364)
Q Consensus 283 s~~el~~~i~~~~g~~~ 299 (364)
|+.|+++.+.+++|.+.
T Consensus 222 s~~ei~~~~~~~~G~~~ 238 (307)
T d1qyca_ 222 SLNELVALWEKKIDKTL 238 (307)
T ss_dssp EHHHHHHHHHHHTTSCC
T ss_pred CHHHHHHHHHHHHCCCC
Confidence 99999999999999873
|
| >d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein At5g02240 (T7H20 290) species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.91 E-value=3.3e-24 Score=183.11 Aligned_cols=221 Identities=13% Similarity=0.114 Sum_probs=150.5
Q ss_pred CCCeEEEEc-CChhhHHHHHHHHhCCCE--EEEEEeCchhhhhhhhCCceEEEccCChhhH--HhhccCceeeEEEEecC
Q 017914 58 SPNRMLILG-MGFVGRIFAEKIKNQGWV--VSGTCTNVMKKKELEQSGFDVHLFNANETAL--MILTTLKNYTHLLVSIP 132 (364)
Q Consensus 58 ~~~~vlVtG-tG~iG~~l~~~L~~~g~~--V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~--~~~~~~d~v~~~~~~~~ 132 (364)
.|++||||| |||||++++++|+++|++ |+.++|++++...+. .+++++.+|+++.+. ..++++|.|+|+++...
T Consensus 2 ~~~tVlVtGatG~iG~~l~~~Ll~~g~~v~v~~~~R~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~~~ 80 (252)
T d2q46a1 2 NLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKIG-GEADVFIGDITDADSINPAFQGIDALVILTSAVP 80 (252)
T ss_dssp SCCEEEEESTTSTTHHHHHHHHHHTTTTCEEEEEESCHHHHHHTT-CCTTEEECCTTSHHHHHHHHTTCSEEEECCCCCC
T ss_pred CCCEEEEECCccHHHHHHHHHHHHCCCcEEEEEEcCCHHHHHhcc-CCcEEEEeeeccccccccccccceeeEEEEeecc
Confidence 468999999 999999999999999964 677888877665554 578999999999775 77899999999987644
Q ss_pred CCCCCC-------------Ch------hhhHHHHHHHHhhcCCccEEEEEccceeecCCCCccccCCCCCCCCChhHHHH
Q 017914 133 PLEGTG-------------DP------MLKHGELLRSTLMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANPTTELGRLR 193 (364)
Q Consensus 133 ~~~~~~-------------~~------~~~~~~~l~~a~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~~sK 193 (364)
...... .. ......++.......+.+.+.+.|+...+....... ......|...+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~------~~~~~~~~~~~ 154 (252)
T d2q46a1 81 KMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAGVKHIVVVGSMGGTNPDHPLN------KLGNGNILVWK 154 (252)
T ss_dssp EECTTCCTTSCCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHTCSEEEEEEETTTTCTTCGGG------GGGGCCHHHHH
T ss_pred ccccccchhhhhhcccccccchhhhccccccceeeccccccccccccccccccccCCCCcccc------cccccchhhhh
Confidence 221100 01 112345666667777788888888765443221110 01223455555
Q ss_pred HHHHHHHHHhhhhcCCcEEEEEecceecCCCChHHHHHHhcCcccccccccCCcccccccHHHHHHHHHHHccCCC-CCc
Q 017914 194 LSAEKGWLNLGRDLGISAQVFRLGGIYGPGRSSVDTIIKQLPLSEGQKMRRARQYTSRIHVDDICQVLSASIDKPS-AWN 272 (364)
Q Consensus 194 ~~~E~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~-~g~ 272 (364)
...+.+ ....+++++++||+.+||+.......+ ............++||++|+|++++.+++++. .|+
T Consensus 155 ~~~~~~----~~~~~~~~~ilRp~~v~g~~~~~~~~~-------~~~~~~~~~~~~~~i~~~Dva~a~~~~l~~~~~~g~ 223 (252)
T d2q46a1 155 RKAEQY----LADSGTPYTIIRAGGLLDKEGGVRELL-------VGKDDELLQTDTKTVPRADVAEVCIQALLFEEAKNK 223 (252)
T ss_dssp HHHHHH----HHHSSSCEEEEEECEEECSCTTSSCEE-------EESTTGGGGSSCCEEEHHHHHHHHHHHTTCGGGTTE
T ss_pred hhhhhh----hhcccccceeecceEEECCCcchhhhh-------hccCcccccCCCCeEEHHHHHHHHHHHhCCccccCc
Confidence 444443 446789999999999999875432211 11111112344678999999999999999875 478
Q ss_pred eEEEeCCC---CCCHHHHHHHHHHHhc
Q 017914 273 VYNVVDDD---PAPREEVFAYAWDLVE 296 (364)
Q Consensus 273 ~~~i~~~~---~~s~~el~~~i~~~~g 296 (364)
+||++++. ..+++|+.+++.++.+
T Consensus 224 ~~~i~~~~~~~~~~~~~~~~lf~~i~~ 250 (252)
T d2q46a1 224 AFDLGSKPEGTSTPTKDFKALFSQVTS 250 (252)
T ss_dssp EEEEEECCTTTSCCCCCHHHHHTTCCC
T ss_pred EEEEeeCCCCCChhHHHHHHHHHHHHh
Confidence 99998753 3667787776665543
|
| >d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Negative transcriptional regulator NmrA species: Aspergillus nidulans [TaxId: 162425]
Probab=99.89 E-value=7.9e-23 Score=184.11 Aligned_cols=221 Identities=11% Similarity=-0.006 Sum_probs=157.4
Q ss_pred CCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhh--hh-hhCCceEEEccCChhh-H--HhhccCceeeEEEEe
Q 017914 58 SPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKK--EL-EQSGFDVHLFNANETA-L--MILTTLKNYTHLLVS 130 (364)
Q Consensus 58 ~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~--~l-~~~~~~~~~~D~~~~~-~--~~~~~~d~v~~~~~~ 130 (364)
.+|+||||| |||||++|+++|+++||+|++++|++.+.. .+ ...+++++.+|+.|.. . .++.+++.+++....
T Consensus 2 ~kktIlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~v~~~~gD~~d~~~~~~~a~~~~~~~~~~~~~ 81 (350)
T d1xgka_ 2 QKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEELQAIPNVTLFQGPLLNNVPLMDTLFEGAHLAFINTTS 81 (350)
T ss_dssp CCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHHHHHHTSTTEEEEESCCTTCHHHHHHHHTTCSEEEECCCS
T ss_pred CCCEEEEECCChHHHHHHHHHHHhCCCeEEEEECCcchhhhhhhcccCCCEEEEeeCCCcHHHHHHHhcCCceEEeeccc
Confidence 358999999 999999999999999999999999765533 22 2368999999999854 2 566777777665421
Q ss_pred cCCCCCCCChhhhHHHHHHHHhhcCCccEEEEEccceeecCCCCccccCCCCCCCCChhHHHHHHHHHHHHHhhhhcCCc
Q 017914 131 IPPLEGTGDPMLKHGELLRSTLMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANPTTELGRLRLSAEKGWLNLGRDLGIS 210 (364)
Q Consensus 131 ~~~~~~~~~~~~~~~~~l~~a~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~ 210 (364)
..........|+++++...|++++++.||....... ...+..+|..+|...|.+++ ..+++
T Consensus 82 ------~~~~~~~~~~~~~~aa~~agv~~~v~~Ss~~~~~~~---------~~~~~~~~~~~k~~~~~~~~----~~~~~ 142 (350)
T d1xgka_ 82 ------QAGDEIAIGKDLADAAKRAGTIQHYIYSSMPDHSLY---------GPWPAVPMWAPKFTVENYVR----QLGLP 142 (350)
T ss_dssp ------TTSCHHHHHHHHHHHHHHHSCCSEEEEEECCCGGGT---------SSCCCCTTTHHHHHHHHHHH----TSSSC
T ss_pred ------ccchhhhhhhHHHHHHHHhCCCceEEEeeccccccC---------CcccchhhhhhHHHHHHHHH----hhccC
Confidence 122344556789999998899889988886533221 12244567888988888766 45789
Q ss_pred EEEEEecceecCCCChHHHHHHhcCcc----cccccccCCcccccccH-HHHHHHHHHHccCCC---CCceEEEeCCCCC
Q 017914 211 AQVFRLGGIYGPGRSSVDTIIKQLPLS----EGQKMRRARQYTSRIHV-DDICQVLSASIDKPS---AWNVYNVVDDDPA 282 (364)
Q Consensus 211 ~~ilRp~~v~g~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~i~v-~Dva~~~~~~l~~~~---~g~~~~i~~~~~~ 282 (364)
++++|++.+++................ .......++..++++++ +|+++++..++.... .|+.|++++ +.+
T Consensus 143 ~~~vr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Dva~~v~~~l~~~~~~~~G~~~~~~g-~~~ 221 (350)
T d1xgka_ 143 STFVYAGIYNNNFTSLPYPLFQMELMPDGTFEWHAPFDPDIPLPWLDAEHDVGPALLQIFKDGPQKWNGHRIALTF-ETL 221 (350)
T ss_dssp EEEEEECEEGGGCBSSSCSSCBEEECTTSCEEEEESSCTTSCEEEECHHHHHHHHHHHHHHHCHHHHTTCEEEECS-EEE
T ss_pred ceeeeeceeeccccccccccccccccccccceeeecccCCCcceEEEeHHHHHHHHHHHHhCChhhcCCeEEEEeC-CcC
Confidence 999999998875422111001100011 11122345667778875 899999999987542 488999886 569
Q ss_pred CHHHHHHHHHHHhcCC
Q 017914 283 PREEVFAYAWDLVEKK 298 (364)
Q Consensus 283 s~~el~~~i~~~~g~~ 298 (364)
|+.|+++.+.+++|++
T Consensus 222 T~~eia~~l~~~~G~~ 237 (350)
T d1xgka_ 222 SPVQVCAAFSRALNRR 237 (350)
T ss_dssp CHHHHHHHHHHHHTSC
T ss_pred CHHHHHHHHHHHHCCc
Confidence 9999999999999987
|
| >d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein PA4017 species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.89 E-value=7.8e-24 Score=177.01 Aligned_cols=192 Identities=14% Similarity=0.105 Sum_probs=127.4
Q ss_pred CCeEEEEc-CChhhHHHHHHHHhCCC--EEEEEEeCchhhhhhhhCCceEEEccCChhhHHhhccCceeeEEEEecCCCC
Q 017914 59 PNRMLILG-MGFVGRIFAEKIKNQGW--VVSGTCTNVMKKKELEQSGFDVHLFNANETALMILTTLKNYTHLLVSIPPLE 135 (364)
Q Consensus 59 ~~~vlVtG-tG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~~~~~~~d~v~~~~~~~~~~~ 135 (364)
.|+||||| |||||++|+++|+++|+ +|++++|++.... ..+.....|+.+........+|.|+|+++......
T Consensus 2 ~KkIlItGatG~iG~~lv~~L~~~~~~~~v~~~~r~~~~~~----~~~~~~~~d~~~~~~~~~~~~d~vi~~~g~~~~~~ 77 (212)
T d2a35a1 2 PKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALAEH----PRLDNPVGPLAELLPQLDGSIDTAFCCLGTTIKEA 77 (212)
T ss_dssp CCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCCCC----TTEECCBSCHHHHGGGCCSCCSEEEECCCCCHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEEEeCCchhhc----ccccccccchhhhhhccccchheeeeeeeeecccc
Confidence 48999999 99999999999999997 6777777653321 23333334433322133456799999875422111
Q ss_pred C----CCChhhhHHHHHHHHhhcCCccEEEEEccceeecCCCCccccCCCCCCCCChhHHHHHHHHHHHHHhhhhcCC-c
Q 017914 136 G----TGDPMLKHGELLRSTLMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANPTTELGRLRLSAEKGWLNLGRDLGI-S 210 (364)
Q Consensus 136 ~----~~~~~~~~~~~l~~a~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~-~ 210 (364)
. +.........++.++++..++++|+|+||.++++. +.+.|..+|..+|+.+++ .++ +
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~a~~~~v~~~i~~Ss~~~~~~-------------~~~~y~~~K~~~E~~l~~----~~~~~ 140 (212)
T d2a35a1 78 GSEEAFRAVDFDLPLAVGKRALEMGARHYLVVSALGADAK-------------SSIFYNRVKGELEQALQE----QGWPQ 140 (212)
T ss_dssp SSHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCTT-------------CSSHHHHHHHHHHHHHTT----SCCSE
T ss_pred ccccccccchhhhhhhcccccccccccccccccccccccc-------------cccchhHHHHHHhhhccc----ccccc
Confidence 1 11223344568899999999999999999877643 336799999999998864 354 5
Q ss_pred EEEEEecceecCCCChHHHHHHhcCcccccccccCCcccccccHHHHHHHHHHHccCCCCCceEEEe
Q 017914 211 AQVFRLGGIYGPGRSSVDTIIKQLPLSEGQKMRRARQYTSRIHVDDICQVLSASIDKPSAWNVYNVV 277 (364)
Q Consensus 211 ~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~~g~~~~i~ 277 (364)
++|+||+.+||+...+.........+. .. ....+..||++|+|++++.+++++..| .+.+.
T Consensus 141 ~~I~Rp~~v~G~~~~~~~~~~~~~~~~---~~--~~~~~~~i~v~DvA~ai~~~~~~~~~g-~~~~~ 201 (212)
T d2a35a1 141 LTIARPSLLFGPREEFRLAEILAAPIA---RI--LPGKYHGIEACDLARALWRLALEEGKG-VRFVE 201 (212)
T ss_dssp EEEEECCSEESTTSCEEGGGGTTCCCC---------CHHHHHHHHHHHHHHHHHHTCCCSE-EEEEE
T ss_pred ceeeCCcceeCCcccccHHHHHHHHHh---hc--cCCCCcEEEHHHHHHHHHHHHcCCCCC-CEEEE
Confidence 999999999998765311101011111 00 112245699999999999999988776 44443
|
| >d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative oxidoreductase Rv2002 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.73 E-value=4.4e-17 Score=137.60 Aligned_cols=201 Identities=9% Similarity=-0.046 Sum_probs=136.0
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhh---CCceEEEccCChhhH---------HhhccCce
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQ---SGFDVHLFNANETAL---------MILTTLKN 123 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~---~~~~~~~~D~~~~~~---------~~~~~~d~ 123 (364)
..+|++|||| ++.||+++++.|+++|++|++.+|+.++.+.+.+ ..+.++.+|++|++. +.+..+|.
T Consensus 4 L~gK~alITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~idi 83 (244)
T d1nffa_ 4 LTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADAARYVHLDVTQPAQWKAAVDTAVTAFGGLHV 83 (244)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhCcceEEEeecCCHHHHHHHHHHHHHHhCCCeE
Confidence 5679999999 8999999999999999999999999877655432 457889999999763 12246788
Q ss_pred eeEEEEecCCCCCCCChhh----hHHHHH----------HHHhhcCCccEEEEEccceeecCCCCccccCCCCCCCCChh
Q 017914 124 YTHLLVSIPPLEGTGDPML----KHGELL----------RSTLMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANPTTEL 189 (364)
Q Consensus 124 v~~~~~~~~~~~~~~~~~~----~~~~~l----------~~a~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y 189 (364)
++|+++........+-... ....|+ ...+++.+-.++|++||...+.... ....|
T Consensus 84 linnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~-----------~~~~Y 152 (244)
T d1nffa_ 84 LVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAGTV-----------ACHGY 152 (244)
T ss_dssp EEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCT-----------TBHHH
T ss_pred EEECCcccCCCchhhCCHHHHhHHhhcccchhhHHHHHHHhHHHhcCcceEEeccccccccccc-----------cccch
Confidence 8888876543221111111 112222 2223344556899999876432211 23579
Q ss_pred HHHHHHHHHHHHHhhhh---cCCcEEEEEecceecCCCChHHHHHHhcCcccccccccCCcccccccHHHHHHHHHHHcc
Q 017914 190 GRLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRSSVDTIIKQLPLSEGQKMRRARQYTSRIHVDDICQVLSASID 266 (364)
Q Consensus 190 ~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~ 266 (364)
+.+|...+.+.+.++.+ .|+++..|-||.+-.+....+. . ... . ....-+...+|+|++++.++.
T Consensus 153 ~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~----~-~~~-~------~pl~R~~~p~diA~~v~fL~s 220 (244)
T d1nffa_ 153 TATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTPMTDWVP----E-DIF-Q------TALGRAAEPVEVSNLVVYLAS 220 (244)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSGGGTTSC----T-TCS-C------CSSSSCBCHHHHHHHHHHHHS
T ss_pred hhHHHHHHHHHHHHHHHhcccCEEEEEEeeCCccChhHhhhh----H-HHH-h------ccccCCCCHHHHHHHHHHHhC
Confidence 99999999999988754 4899999999988654321110 0 000 0 011224789999999999886
Q ss_pred CC---CCCceEEEeCCC
Q 017914 267 KP---SAWNVYNVVDDD 280 (364)
Q Consensus 267 ~~---~~g~~~~i~~~~ 280 (364)
.. -.|+++.+.+|.
T Consensus 221 ~~s~~itG~~i~vDGG~ 237 (244)
T d1nffa_ 221 DESSYSTGAEFVVDGGT 237 (244)
T ss_dssp GGGTTCCSCEEEESTTG
T ss_pred hhhCCCcCCEEEECCCe
Confidence 54 348999998774
|
| >d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein TTHA0369 species: Thermus thermophilus [TaxId: 274]
Probab=99.73 E-value=8.8e-17 Score=136.24 Aligned_cols=210 Identities=11% Similarity=-0.008 Sum_probs=136.8
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCChhhH---------HhhccCceeeE
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETAL---------MILTTLKNYTH 126 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~---------~~~~~~d~v~~ 126 (364)
..+|++|||| ++.||+++++.|+++|++|++.+|+.+..+..+..+..++.+|++|.+. +.+..+|+++|
T Consensus 3 l~GK~alITGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDiLVn 82 (248)
T d2d1ya1 3 FAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGKEVAEAIGGAFFQVDLEDERERVRFVEEAAYALGRVDVLVN 82 (248)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTHHHHHHHHTCEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHHHHhcCCCCeEEE
Confidence 4679999999 9999999999999999999999998776655555677889999999653 22346899999
Q ss_pred EEEecCCCCCCCChhh----hHHHHH----------HHHhhcCCccEEEEEccceeecCCCCccccCCCCCCCCChhHHH
Q 017914 127 LLVSIPPLEGTGDPML----KHGELL----------RSTLMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANPTTELGRL 192 (364)
Q Consensus 127 ~~~~~~~~~~~~~~~~----~~~~~l----------~~a~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~~s 192 (364)
.|+......-..-... ....|+ +..+++.+-.++|++||...+... .....|+.+
T Consensus 83 nAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Ii~isS~~~~~~~-----------~~~~~Y~as 151 (248)
T d2d1ya1 83 NAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLFAE-----------QENAAYNAS 151 (248)
T ss_dssp CCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSBC-----------TTBHHHHHH
T ss_pred eCcCCCCCChhhCCHHHHHHHHHhhhhhHhhhhhhhcccccccccccccccccccccccc-----------cccchhHHH
Confidence 8876543221111111 112232 223335556799999987643221 133679999
Q ss_pred HHHHHHHHHHhhhh---cCCcEEEEEecceecCCCChHHHHHHhcCcc--cccccccCCcccccccHHHHHHHHHHHccC
Q 017914 193 RLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRSSVDTIIKQLPLS--EGQKMRRARQYTSRIHVDDICQVLSASIDK 267 (364)
Q Consensus 193 K~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~ 267 (364)
|...+.+.+.++.+ +|+++..|.||.+-.+. ........... ............-+...+|+|++++.++..
T Consensus 152 Kaal~~ltk~lA~el~~~gIrVN~I~PG~v~T~~---~~~~~~~~~~~~~~~~~~~~~~pl~R~~~pedia~~v~fL~S~ 228 (248)
T d2d1ya1 152 KGGLVNLTRSLALDLAPLRIRVNAVAPGAIATEA---VLEAIALSPDPERTRRDWEDLHALRRLGKPEEVAEAVLFLASE 228 (248)
T ss_dssp HHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHH---HHHHHC--------CHHHHTTSTTSSCBCHHHHHHHHHHHHSG
T ss_pred HHHHHHHHHHHHHHhhhhCcEEEEEeeCCCCCch---HHHHhhcCCCHHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCc
Confidence 99999999888654 48999999999875431 11111000000 000000000111236689999999998865
Q ss_pred C---CCCceEEEeCCC
Q 017914 268 P---SAWNVYNVVDDD 280 (364)
Q Consensus 268 ~---~~g~~~~i~~~~ 280 (364)
. -.|+++.+.+|-
T Consensus 229 ~s~~itG~~i~vDGG~ 244 (248)
T d2d1ya1 229 KASFITGAILPVDGGM 244 (248)
T ss_dssp GGTTCCSCEEEESTTG
T ss_pred hhcCCCCcEEEcCcCc
Confidence 4 248999998774
|
| >d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.72 E-value=1e-16 Score=134.95 Aligned_cols=200 Identities=10% Similarity=-0.030 Sum_probs=131.3
Q ss_pred CCCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCChhhH---------HhhccCceee
Q 017914 56 WQSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETAL---------MILTTLKNYT 125 (364)
Q Consensus 56 ~~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~---------~~~~~~d~v~ 125 (364)
..++|+||||| ++.||+++++.|+++|++|++.+|+.+.. .++..+.+|++|++. +.+..+|+++
T Consensus 4 sl~gK~~lITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~-----~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDiLV 78 (237)
T d1uzma1 4 PFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAP-----KGLFGVEVDVTDSDAVDRAFTAVEEHQGPVEVLV 78 (237)
T ss_dssp CCCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCC-----TTSEEEECCTTCHHHHHHHHHHHHHHHSSCSEEE
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcchh-----cCceEEEEecCCHHHHHHHHHHHHHhcCCceEEE
Confidence 46779999999 89999999999999999999999987654 356788999999763 1224689999
Q ss_pred EEEEecCCCCCCCChhh----hHHHH----------HHHHhhcCCccEEEEEccceeecCCCCccccCCCCCCCCChhHH
Q 017914 126 HLLVSIPPLEGTGDPML----KHGEL----------LRSTLMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANPTTELGR 191 (364)
Q Consensus 126 ~~~~~~~~~~~~~~~~~----~~~~~----------l~~a~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~~ 191 (364)
|+++......-...... ....| ++..+++.+..++|++||...+.... ....|+.
T Consensus 79 nnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Iv~isS~~~~~~~~-----------~~~~Y~a 147 (237)
T d1uzma1 79 SNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLWGIG-----------NQANYAA 147 (237)
T ss_dssp EECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC----------------CCHHHHH
T ss_pred eeecccccccHhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccCCCceEEEcchhhccCCc-----------ccHHHHH
Confidence 99876443221111111 11222 23333456667999999875432211 2357999
Q ss_pred HHHHHHHHHHHhhhh---cCCcEEEEEecceecCCCChH-HHHHHhcCcccccccccCCcccccccHHHHHHHHHHHccC
Q 017914 192 LRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRSSV-DTIIKQLPLSEGQKMRRARQYTSRIHVDDICQVLSASIDK 267 (364)
Q Consensus 192 sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~ 267 (364)
+|.+.+.+.+.++.+ .|+++..|.||.+..+....+ ...... .....+ ..-+...+|+|++++.++..
T Consensus 148 sKaal~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~--~~~~~p------l~R~~~pedvA~~v~fL~S~ 219 (237)
T d1uzma1 148 SKAGVIGMARSIARELSKANVTANVVAPGYIDTDMTRALDERIQQG--ALQFIP------AKRVGTPAEVAGVVSFLASE 219 (237)
T ss_dssp HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHSCHHHHHH--HGGGCT------TCSCBCHHHHHHHHHHHHSG
T ss_pred HHHHHHHHHHHHHhhhhcCCceeeeeeeCcCCChhhhccCHHHHHH--HHhcCC------CCCCcCHHHHHHHHHHHhCc
Confidence 999999999888754 489999999999864321100 111110 000000 11236689999999998865
Q ss_pred C---CCCceEEEeCC
Q 017914 268 P---SAWNVYNVVDD 279 (364)
Q Consensus 268 ~---~~g~~~~i~~~ 279 (364)
. -.|+++.+.+|
T Consensus 220 ~s~~itG~~i~vdGG 234 (237)
T d1uzma1 220 DASYISGAVIPVDGG 234 (237)
T ss_dssp GGTTCCSCEEEESTT
T ss_pred hhcCCcCCeEEECCC
Confidence 4 24899998776
|
| >d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Escherichia coli [TaxId: 562]
Probab=99.72 E-value=6.2e-17 Score=136.85 Aligned_cols=201 Identities=14% Similarity=0.030 Sum_probs=135.4
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhh---CCceEEEccCChhhH--H-------hhccCce
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQ---SGFDVHLFNANETAL--M-------ILTTLKN 123 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~---~~~~~~~~D~~~~~~--~-------~~~~~d~ 123 (364)
..+|++|||| ++.||+++++.|+++|++|++.+|+.++.+.+.+ .+...+.+|++|.+. . .+..+|.
T Consensus 2 l~gK~alITGas~GIG~a~a~~l~~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDi 81 (243)
T d1q7ba_ 2 FEGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGKGLMLNVTDPASIESVLEKIRAEFGEVDI 81 (243)
T ss_dssp CTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHTCSCSE
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCCcEEEEEecCHHHhhhhhhhhhcccCCcce
Confidence 4578999999 9999999999999999999999999877665432 457788999999663 1 2246888
Q ss_pred eeEEEEecCCCCCCCChhhh----HHHH----------HHHHhhcCCccEEEEEccceeecCCCCccccCCCCCCCCChh
Q 017914 124 YTHLLVSIPPLEGTGDPMLK----HGEL----------LRSTLMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANPTTEL 189 (364)
Q Consensus 124 v~~~~~~~~~~~~~~~~~~~----~~~~----------l~~a~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y 189 (364)
++|.++......-....... ...| ++..+++.+-.++|++||...+.... ....|
T Consensus 82 lVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~~~~~-----------~~~~Y 150 (243)
T d1q7ba_ 82 LVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKRHGRIITIGSVVGTMGNG-----------GQANY 150 (243)
T ss_dssp EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCT-----------TCHHH
T ss_pred ehhhhhhccccccccccccccccccceeechhhhhHHHHHHHHHHcCCCEeeeecchhhcCCCC-----------CCHHH
Confidence 88887654432211111111 1122 22223344556899999876442222 23589
Q ss_pred HHHHHHHHHHHHHhhhh---cCCcEEEEEecceecCCC-Ch----HHHHHHhcCcccccccccCCcccccccHHHHHHHH
Q 017914 190 GRLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGR-SS----VDTIIKQLPLSEGQKMRRARQYTSRIHVDDICQVL 261 (364)
Q Consensus 190 ~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~-~~----~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~ 261 (364)
+.+|.+.+.+.+.++.+ +|+++..|.||.+-.+.. .. ...+....++ .-+...+|+|+++
T Consensus 151 ~asKaal~~lt~~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~pl------------~R~~~pedvA~~v 218 (243)
T d1q7ba_ 151 AAAKAGLIGFSKSLAREVASRGITVNVVAPGFIETDMTRALSDDQRAGILAQVPA------------GRLGGAQEIANAV 218 (243)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSCHHHHHHHHTTCTT------------SSCBCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhCccCeEEEEEecceEechhhhhhhhhHHHHHHhcCCC------------CCCCCHHHHHHHH
Confidence 99999999999988754 589999999998854320 11 1111111111 1235689999999
Q ss_pred HHHccCCC---CCceEEEeCCC
Q 017914 262 SASIDKPS---AWNVYNVVDDD 280 (364)
Q Consensus 262 ~~~l~~~~---~g~~~~i~~~~ 280 (364)
+.++.... .|+++.+.+|-
T Consensus 219 ~fL~S~~s~~itGq~i~vdGG~ 240 (243)
T d1q7ba_ 219 AFLASDEAAYITGETLHVNGGM 240 (243)
T ss_dssp HHHHSGGGTTCCSCEEEESTTS
T ss_pred HHHhCchhcCCcCCeEEECCCe
Confidence 99987542 48999998774
|
| >d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus [TaxId: 274]
Probab=99.72 E-value=4.6e-16 Score=131.32 Aligned_cols=201 Identities=14% Similarity=0.020 Sum_probs=136.4
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhh-hCCceEEEccCChhhH--H-------hhccCceee
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELE-QSGFDVHLFNANETAL--M-------ILTTLKNYT 125 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~-~~~~~~~~~D~~~~~~--~-------~~~~~d~v~ 125 (364)
..+|++|||| ++.||+++++.|+++|++|++.+|+.++.+.+. ..+...+.+|++|++. . .+..+|+++
T Consensus 3 L~gK~~lITGas~GIG~aia~~l~~~G~~V~~~~r~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDilV 82 (242)
T d1ulsa_ 3 LKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVGAHPVVMDVADPASVERGFAEALAHLGRLDGVV 82 (242)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTTCEEEECCTTCHHHHHHHHHHHHHHHSSCCEEE
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCeEEEEecCCHHHHHHHHHHHHHhcCCceEEE
Confidence 4568999999 899999999999999999999999987766543 3578899999999764 1 224688888
Q ss_pred EEEEecCCCCCCCCh----hhhHHHHHHH----------HhhcCCccEEEEEccceeecCCCCccccCCCCCCCCChhHH
Q 017914 126 HLLVSIPPLEGTGDP----MLKHGELLRS----------TLMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANPTTELGR 191 (364)
Q Consensus 126 ~~~~~~~~~~~~~~~----~~~~~~~l~~----------a~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~~ 191 (364)
|+++.........-. ......|+.. .+++.+..+++.+||....+. .....|+.
T Consensus 83 nnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~~~i~~~ss~~~~~~------------~~~~~Y~a 150 (242)
T d1ulsa_ 83 HYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTASRVYLGN------------LGQANYAA 150 (242)
T ss_dssp ECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECCGGGGCC------------TTCHHHHH
T ss_pred ECCcccccCchhhCcchhhhccccccchhhhhhhhhccccccccccceeeeeccccccCC------------CCCcchHH
Confidence 888754432211111 1112223322 233556667887777543221 13357999
Q ss_pred HHHHHHHHHHHhhhh---cCCcEEEEEecceecCCCCh-----HHHHHHhcCcccccccccCCcccccccHHHHHHHHHH
Q 017914 192 LRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRSS-----VDTIIKQLPLSEGQKMRRARQYTSRIHVDDICQVLSA 263 (364)
Q Consensus 192 sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~ 263 (364)
+|...+.+.+.++.+ .|+++..|.||.+-.+.... ...+....++. -+...+|+|++++.
T Consensus 151 sKaal~~ltk~lA~ela~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~pl~------------R~~~pedia~~v~f 218 (242)
T d1ulsa_ 151 SMAGVVGLTRTLALELGRWGIRVNTLAPGFIETRMTAKVPEKVREKAIAATPLG------------RAGKPLEVAYAALF 218 (242)
T ss_dssp HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTSSSCHHHHHHHHHTCTTC------------SCBCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhhCcEEEEEeeCcccChhhhcCCHHHHHHHHhcCCCC------------CCCCHHHHHHHHHH
Confidence 999999999888644 47999999999987654221 12222222211 12568999999999
Q ss_pred HccCCC---CCceEEEeCCCC
Q 017914 264 SIDKPS---AWNVYNVVDDDP 281 (364)
Q Consensus 264 ~l~~~~---~g~~~~i~~~~~ 281 (364)
++.... .|+++.+.+|..
T Consensus 219 L~S~~s~~itG~~i~vDGG~t 239 (242)
T d1ulsa_ 219 LLSDESSFITGQVLFVDGGRT 239 (242)
T ss_dssp HHSGGGTTCCSCEEEESTTTT
T ss_pred HhchhhCCCCCcEEEECCCcc
Confidence 886542 489999987753
|
| >d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.71 E-value=2.4e-16 Score=133.07 Aligned_cols=200 Identities=11% Similarity=-0.035 Sum_probs=134.1
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhh--CCceEEEccCChhhH--Hhh---ccCceeeEEE
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQ--SGFDVHLFNANETAL--MIL---TTLKNYTHLL 128 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~--~~~~~~~~D~~~~~~--~~~---~~~d~v~~~~ 128 (364)
..+|++|||| ++.||+++++.|+++|++|++.+|+.++...+.+ .++..+.+|++|.+. ..+ ..+|+++|++
T Consensus 3 l~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~g~iDilVnnA 82 (242)
T d1cyda_ 3 FSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPGIEPVCVDLGDWDATEKALGGIGPVDLLVNNA 82 (242)
T ss_dssp CTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTTCCCCSEEEECC
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhcCCCeEEEEeCCCHHHHHHHHHHcCCCeEEEECC
Confidence 5679999999 8999999999999999999999999877655432 578899999999774 333 4678888887
Q ss_pred EecCCCCCCCChhh----hHHHHH----------HHH-hhcCCccEEEEEccceeecCCCCccccCCCCCCCCChhHHHH
Q 017914 129 VSIPPLEGTGDPML----KHGELL----------RST-LMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANPTTELGRLR 193 (364)
Q Consensus 129 ~~~~~~~~~~~~~~----~~~~~l----------~~a-~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~~sK 193 (364)
+......-..-... ....|+ ... .++.+-.++|++||...+.... ....|+.+|
T Consensus 83 g~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~-----------~~~~Y~asK 151 (242)
T d1cyda_ 83 ALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVTFP-----------NLITYSSTK 151 (242)
T ss_dssp CCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCT-----------TBHHHHHHH
T ss_pred ccccchhHHHHHHHHHHHHHHHHhccchHHHHHhchhhhhhcccCcccccchhhccccCC-----------ccccccchH
Confidence 65433211111111 111122 111 1233446899999875432221 235799999
Q ss_pred HHHHHHHHHhhhh---cCCcEEEEEecceecCCC-------ChHHHHHHhcCcccccccccCCcccccccHHHHHHHHHH
Q 017914 194 LSAEKGWLNLGRD---LGISAQVFRLGGIYGPGR-------SSVDTIIKQLPLSEGQKMRRARQYTSRIHVDDICQVLSA 263 (364)
Q Consensus 194 ~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~ 263 (364)
...+.+.+.++.+ .|+++..|.||.+..+.. .....+....++ .-+...+|+|++++.
T Consensus 152 aal~~lt~~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~pl------------~R~~~peeva~~v~f 219 (242)
T d1cyda_ 152 GAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGKKVSADPEFARKLKERHPL------------RKFAEVEDVVNSILF 219 (242)
T ss_dssp HHHHHHHHHHHHHHGGGTEEEEEEEECCBTTHHHHHHTCCHHHHHHHHHHSTT------------SSCBCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCccCeecccCCCCCccCHHHHhhcCCHHHHHHHHhcCCC------------CCCcCHHHHHHHHHH
Confidence 9999999988754 479999999998854320 111222222221 123668999999999
Q ss_pred HccCCC---CCceEEEeCC
Q 017914 264 SIDKPS---AWNVYNVVDD 279 (364)
Q Consensus 264 ~l~~~~---~g~~~~i~~~ 279 (364)
++.... .|+++.+.+|
T Consensus 220 L~S~~s~~itG~~i~vDGG 238 (242)
T d1cyda_ 220 LLSDRSASTSGGGILVDAG 238 (242)
T ss_dssp HHSGGGTTCCSSEEEESTT
T ss_pred HhCchhcCcCCceEEeCcc
Confidence 886542 4899998776
|
| >d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=99.71 E-value=1.9e-16 Score=134.53 Aligned_cols=203 Identities=8% Similarity=-0.078 Sum_probs=134.3
Q ss_pred CCCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhh----h--CCceEEEccCChhhH--H-------hhc
Q 017914 56 WQSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELE----Q--SGFDVHLFNANETAL--M-------ILT 119 (364)
Q Consensus 56 ~~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~----~--~~~~~~~~D~~~~~~--~-------~~~ 119 (364)
...+|.+|||| ++.||+++++.|+++|++|++.+|+.+..+.+. + ..+..+.+|++|++. . .+.
T Consensus 7 ~lenKvalITGas~GIG~a~a~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~g 86 (251)
T d2c07a1 7 CGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTEHK 86 (251)
T ss_dssp CCSSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHCS
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHhcC
Confidence 35678999998 899999999999999999999999887655432 2 357889999999763 1 124
Q ss_pred cCceeeEEEEecCCCCCCCChhhhH----HH----------HHHHHhhcCCccEEEEEccceeecCCCCccccCCCCCCC
Q 017914 120 TLKNYTHLLVSIPPLEGTGDPMLKH----GE----------LLRSTLMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANP 185 (364)
Q Consensus 120 ~~d~v~~~~~~~~~~~~~~~~~~~~----~~----------~l~~a~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~ 185 (364)
.+|+++|.++.............++ .. .++..+++.+-.++|++||...+.... .
T Consensus 87 ~iDilvnnag~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~~~~~-----------~ 155 (251)
T d2c07a1 87 NVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLTGNV-----------G 155 (251)
T ss_dssp CCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCT-----------T
T ss_pred CceeeeeccccccccccccccHHHHhhhheeeehhhhhhhhhcCcccccCCCeEEEEECCHHhcCCCC-----------C
Confidence 6788888776544332221111111 11 222233345557999999875432221 2
Q ss_pred CChhHHHHHHHHHHHHHhhhh---cCCcEEEEEecceecCCCC-hHHHHHHh--cCcccccccccCCcccccccHHHHHH
Q 017914 186 TTELGRLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRS-SVDTIIKQ--LPLSEGQKMRRARQYTSRIHVDDICQ 259 (364)
Q Consensus 186 ~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~-~~~~~~~~--~~~~~~~~~~~~~~~~~~i~v~Dva~ 259 (364)
...|+.+|...+.+.+.++.+ .|+++..|.||.+-.+... ........ ...+. .-+...+|+|+
T Consensus 156 ~~~Y~asKaal~~ltr~lA~el~~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~pl----------~R~~~pedvA~ 225 (251)
T d2c07a1 156 QANYSSSKAGVIGFTKSLAKELASRNITVNAIAPGFISSDMTDKISEQIKKNIISNIPA----------GRMGTPEEVAN 225 (251)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC-----CCHHHHHHHHTTCTT----------SSCBCHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEccCCEecccccccCHHHHHHHHhcCCC----------CCCcCHHHHHH
Confidence 357999999999999988754 4899999999998765421 11111111 11111 11356899999
Q ss_pred HHHHHccCCC---CCceEEEeCC
Q 017914 260 VLSASIDKPS---AWNVYNVVDD 279 (364)
Q Consensus 260 ~~~~~l~~~~---~g~~~~i~~~ 279 (364)
+++.++.... .|+++.+.+|
T Consensus 226 ~v~fL~S~~s~~itG~~i~vDGG 248 (251)
T d2c07a1 226 LACFLSSDKSGYINGRVFVIDGG 248 (251)
T ss_dssp HHHHHHSGGGTTCCSCEEEESTT
T ss_pred HHHHHhCchhCCCcCcEEEECCC
Confidence 9999886543 4899998776
|
| >d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.70 E-value=2.4e-16 Score=133.38 Aligned_cols=200 Identities=9% Similarity=0.003 Sum_probs=133.7
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhh--CCceEEEccCChhhH--Hh---hccCceeeEEE
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQ--SGFDVHLFNANETAL--MI---LTTLKNYTHLL 128 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~--~~~~~~~~D~~~~~~--~~---~~~~d~v~~~~ 128 (364)
..+|+||||| ++.||+++++.|+++|++|++.+|+.++.+.+.+ .++..+.+|++|.+. .. +..+|.++|.+
T Consensus 5 L~GK~~lITGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~g~iDilVnnA 84 (244)
T d1pr9a_ 5 LAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPGIEPVCVDLGDWEATERALGSVGPVDLLVNNA 84 (244)
T ss_dssp CTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTTCCCCCEEEECC
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHhcCCCeEEEEeCCCHHHHHHHHHHhCCceEEEecc
Confidence 5679999999 9999999999999999999999999887665532 568899999999774 33 34567777777
Q ss_pred EecCCCCCCCChhh----hHHHH----------HHHH-hhcCCccEEEEEccceeecCCCCccccCCCCCCCCChhHHHH
Q 017914 129 VSIPPLEGTGDPML----KHGEL----------LRST-LMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANPTTELGRLR 193 (364)
Q Consensus 129 ~~~~~~~~~~~~~~----~~~~~----------l~~a-~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~~sK 193 (364)
+......-..-... ....| ++.. .++.+..++|++||........ ....|+.+|
T Consensus 85 g~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~~-----------~~~~Y~asK 153 (244)
T d1pr9a_ 85 AVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRAVT-----------NHSVYCSTK 153 (244)
T ss_dssp CCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCT-----------TBHHHHHHH
T ss_pred ccccccchhhhhHHHHHHHHHHhhhhhhHHHHHhhhHHHHhCCcceEeeccccccccccc-----------chhhhhhhH
Confidence 55433211111111 11111 2221 2234556899999875432211 235799999
Q ss_pred HHHHHHHHHhhhh---cCCcEEEEEecceecCCC-----C--hHHHHHHhcCcccccccccCCcccccccHHHHHHHHHH
Q 017914 194 LSAEKGWLNLGRD---LGISAQVFRLGGIYGPGR-----S--SVDTIIKQLPLSEGQKMRRARQYTSRIHVDDICQVLSA 263 (364)
Q Consensus 194 ~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~-----~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~ 263 (364)
...+.+.+.++.+ .|+++..|.||.+..+.. . ....+....++ .-+...+|+|++++.
T Consensus 154 aal~~lt~~lA~el~~~gIrvN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~pl------------~R~~~peevA~~v~f 221 (244)
T d1pr9a_ 154 GALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQATWSDPHKAKTMLNRIPL------------GKFAEVEHVVNAILF 221 (244)
T ss_dssp HHHHHHHHHHHHHHGGGTEEEEEEEECCBCSHHHHTTSCSHHHHHHHHTTCTT------------CSCBCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCcEEEEEEeeCcCcChHHhhhccChHHHHHHHhcCCC------------CCCcCHHHHHHHHHH
Confidence 9999999988754 489999999998865420 1 01111111111 123678999999998
Q ss_pred HccCC---CCCceEEEeCC
Q 017914 264 SIDKP---SAWNVYNVVDD 279 (364)
Q Consensus 264 ~l~~~---~~g~~~~i~~~ 279 (364)
++... -.|+++.+.+|
T Consensus 222 L~S~~a~~itG~~i~vDGG 240 (244)
T d1pr9a_ 222 LLSDRSGMTTGSTLPVEGG 240 (244)
T ss_dssp HHSGGGTTCCSCEEEESTT
T ss_pred HhCchhCCcCCcEEEECcc
Confidence 88654 24899998776
|
| >d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase species: Streptomyces hydrogenans [TaxId: 1905]
Probab=99.70 E-value=5.5e-16 Score=131.60 Aligned_cols=207 Identities=10% Similarity=-0.077 Sum_probs=133.9
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhh---CCceEEEccCChhhH--H-------hhccCce
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQ---SGFDVHLFNANETAL--M-------ILTTLKN 123 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~---~~~~~~~~D~~~~~~--~-------~~~~~d~ 123 (364)
..+|++|||| ++.||+++++.|+++|++|++.+|+.++...+.+ ..+.++.+|+++.+. . .+..+|.
T Consensus 3 L~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDi 82 (254)
T d1hdca_ 3 LSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELGDAARYQHLDVTIEEDWQRVVAYAREEFGSVDG 82 (254)
T ss_dssp CCCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred CCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCceEEEEcccCCHHHHHHHHHHHHHHcCCccE
Confidence 5679999998 8999999999999999999999998877655432 357889999999663 1 2246788
Q ss_pred eeEEEEecCCCCCCCChhh----hHHHH----------HHHHhhcCCccEEEEEccceeecCCCCccccCCCCCCCCChh
Q 017914 124 YTHLLVSIPPLEGTGDPML----KHGEL----------LRSTLMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANPTTEL 189 (364)
Q Consensus 124 v~~~~~~~~~~~~~~~~~~----~~~~~----------l~~a~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y 189 (364)
++|+++............. ....| ++..++..+-.++|++||...+... .....|
T Consensus 83 lVnnAg~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~~~G~II~isS~~~~~~~-----------~~~~~Y 151 (254)
T d1hdca_ 83 LVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLMGL-----------ALTSSY 151 (254)
T ss_dssp EEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC-----------TTCHHH
T ss_pred EEecCccccccccccccccccchhhhHHhhHHHHHHHHHHHHHhhcCCCeecccccchhcccc-----------cchhhH
Confidence 8888865443221111111 11122 2222334456799999987543221 133689
Q ss_pred HHHHHHHHHHHHHhhhh---cCCcEEEEEecceecCCCChHHHHHHhcCcccccccccCCcccccccHHHHHHHHHHHcc
Q 017914 190 GRLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRSSVDTIIKQLPLSEGQKMRRARQYTSRIHVDDICQVLSASID 266 (364)
Q Consensus 190 ~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~ 266 (364)
+.+|...+.+.+.++.+ .|+++..|.||.+..+. ...... . .........+.. +--+..+|+|++++.++.
T Consensus 152 ~asKaal~~lt~~lA~e~a~~gIrVN~I~PG~v~T~~---~~~~~~-~-~~~~~~~~~pl~-R~g~~PedvA~~v~fL~S 225 (254)
T d1hdca_ 152 GASKWGVRGLSKLAAVELGTDRIRVNSVHPGMTYTPM---TAETGI-R-QGEGNYPNTPMG-RVGNEPGEIAGAVVKLLS 225 (254)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHH---HHHHTC-C-CSTTSCTTSTTS-SCB-CHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHHHhCCCceEEEEeeeCcccCcc---chhcCH-H-HHHHHHhCCCCC-CCCCCHHHHHHHHHHHhc
Confidence 99999999999988754 47999999999885321 111100 0 000000000000 111347999999999986
Q ss_pred CCC---CCceEEEeCCC
Q 017914 267 KPS---AWNVYNVVDDD 280 (364)
Q Consensus 267 ~~~---~g~~~~i~~~~ 280 (364)
... .|+++.+.+|-
T Consensus 226 ~~a~~itG~~i~vDGG~ 242 (254)
T d1hdca_ 226 DTSSYVTGAELAVDGGW 242 (254)
T ss_dssp GGGTTCCSCEEEESTTT
T ss_pred hhhCCCCCceEEeCCCc
Confidence 542 48999998874
|
| >d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sorbitol dehydrogenase species: Rhodobacter sphaeroides [TaxId: 1063]
Probab=99.69 E-value=8.8e-16 Score=130.82 Aligned_cols=216 Identities=12% Similarity=0.019 Sum_probs=137.3
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhh---CCceEEEccCChhhH--H-------hhccCce
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQ---SGFDVHLFNANETAL--M-------ILTTLKN 123 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~---~~~~~~~~D~~~~~~--~-------~~~~~d~ 123 (364)
..+|++|||| ++.||+++++.|+++|++|++.+|+.++.+.+.+ .++..+.+|++|++. . .+..+|.
T Consensus 3 L~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~g~iDi 82 (256)
T d1k2wa_ 3 LDGKTALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEIGPAACAIALDVTDQASIDRCVAELLDRWGSIDI 82 (256)
T ss_dssp TTTEEEEEETCSSHHHHHHHHHHHHTTEEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCceEEEEeeCCCHHHHHHHHHHHHHHhCCccE
Confidence 4568999999 9999999999999999999999998876655432 467889999999764 1 2246788
Q ss_pred eeEEEEecCCCCCCCChhh----hHHHHHHH----------H-hhcCCccEEEEEccceeecCCCCccccCCCCCCCCCh
Q 017914 124 YTHLLVSIPPLEGTGDPML----KHGELLRS----------T-LMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANPTTE 188 (364)
Q Consensus 124 v~~~~~~~~~~~~~~~~~~----~~~~~l~~----------a-~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~ 188 (364)
++|.++.........-... ....|+.. . .+..+..++|++||...+... .....
T Consensus 83 lVnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~-----------~~~~~ 151 (256)
T d1k2wa_ 83 LVNNAALFDLAPIVEITRESYDRLFAINVSGTLFMMQAVARAMIAGGRGGKIINMASQAGRRGE-----------ALVGV 151 (256)
T ss_dssp EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCC-----------TTCHH
T ss_pred EEeecccccccccccCCHHHHHhhhceeeeccccchhhccchhHHhccCCccccccchhhcccc-----------ccccc
Confidence 8888875443221111111 11122211 1 123334689999987543211 13368
Q ss_pred hHHHHHHHHHHHHHhhh---hcCCcEEEEEecceecCCCC-hHHHHHHhcCccccc---ccccCCcccccccHHHHHHHH
Q 017914 189 LGRLRLSAEKGWLNLGR---DLGISAQVFRLGGIYGPGRS-SVDTIIKQLPLSEGQ---KMRRARQYTSRIHVDDICQVL 261 (364)
Q Consensus 189 Y~~sK~~~E~~~~~~~~---~~~~~~~ilRp~~v~g~~~~-~~~~~~~~~~~~~~~---~~~~~~~~~~~i~v~Dva~~~ 261 (364)
|+.+|...+.+.+.++. ..|+++..|.||.+-.+... ....+.......... .+.......-+...+|+|+++
T Consensus 152 Y~asKaal~~lt~~lA~el~~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~~~p~evA~~v 231 (256)
T d1k2wa_ 152 YCATKAAVISLTQSAGLNLIRHGINVNAIAPGVVDGEHWDGVDAKFADYENLPRGEKKRQVGAAVPFGRMGRAEDLTGMA 231 (256)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTHHHHHHHHHHHHTCCTTHHHHHHHHHSTTSSCBCHHHHHHHH
T ss_pred hhhhhhHHHHHHHHHHHHhcccCeEEEEEecCCCCchhhhhhhhhhhhhccCChHHHHHHHHhcCCCCCCcCHHHHHHHH
Confidence 99999999999988874 34899999999988765421 111111111110000 000000011235689999999
Q ss_pred HHHccCCC---CCceEEEeCCCCCC
Q 017914 262 SASIDKPS---AWNVYNVVDDDPAP 283 (364)
Q Consensus 262 ~~~l~~~~---~g~~~~i~~~~~~s 283 (364)
+.++.... .|+++.+.+|..+|
T Consensus 232 ~fL~S~~a~~iTG~~i~vDGG~~ms 256 (256)
T d1k2wa_ 232 IFLATPEADYIVAQTYNVDGGNWMS 256 (256)
T ss_dssp HHTTSGGGTTCCSCEEEESTTSSCC
T ss_pred HHHhCchhCCccCceEEECcchhhC
Confidence 99886542 48999998886654
|
| >d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Gluconate 5-dehydrogenase species: Thermotoga maritima [TaxId: 2336]
Probab=99.69 E-value=8.6e-16 Score=130.36 Aligned_cols=201 Identities=13% Similarity=0.009 Sum_probs=133.7
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhh-------hCCceEEEccCChhhH---------Hhhc
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELE-------QSGFDVHLFNANETAL---------MILT 119 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~-------~~~~~~~~~D~~~~~~---------~~~~ 119 (364)
..+|++|||| ++.||+.+++.|+++|++|++.+|+.++..... ...+..+.+|++|++. +.+.
T Consensus 3 l~gK~~lITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 82 (251)
T d1vl8a_ 3 LRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEKFG 82 (251)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 4678999999 899999999999999999999999877654322 1356788999999663 1224
Q ss_pred cCceeeEEEEecCCCCCCCChhh----hHHHH----------HHHHhhcCCccEEEEEccceeecCCCCccccCCCCCCC
Q 017914 120 TLKNYTHLLVSIPPLEGTGDPML----KHGEL----------LRSTLMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANP 185 (364)
Q Consensus 120 ~~d~v~~~~~~~~~~~~~~~~~~----~~~~~----------l~~a~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~ 185 (364)
.+|+++|.++.........-... ....| ++..+++.+-.++|++||...... +...
T Consensus 83 ~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~i~S~~~~~~----------~~~~ 152 (251)
T d1vl8a_ 83 KLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEEV----------TMPN 152 (251)
T ss_dssp CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGTCC----------CSSS
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccccccccccccchhccc----------cCcc
Confidence 68999998875433221111111 11122 233344556679999987542110 1112
Q ss_pred CChhHHHHHHHHHHHHHhhhh---cCCcEEEEEecceecCCCCh-------HHHHHHhcCcccccccccCCcccccccHH
Q 017914 186 TTELGRLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRSS-------VDTIIKQLPLSEGQKMRRARQYTSRIHVD 255 (364)
Q Consensus 186 ~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~i~v~ 255 (364)
...|+.+|...+.+.+.++.+ .|+++..|.||.+-.+.... ...+....+++ -+...+
T Consensus 153 ~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~pl~------------R~~~pe 220 (251)
T d1vl8a_ 153 ISAYAASKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMTEAVFSDPEKLDYMLKRIPLG------------RTGVPE 220 (251)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTTTHHHHTCHHHHHHHHHTCTTS------------SCBCGG
T ss_pred ccchHHHHHhHHHHHHHHHHHhcccCeEEEEEeeCcccCHHHHhccCCHHHHHHHHhcCCCC------------CCCCHH
Confidence 357999999999999888754 48999999999987654211 11222222211 125579
Q ss_pred HHHHHHHHHccCCC---CCceEEEeCC
Q 017914 256 DICQVLSASIDKPS---AWNVYNVVDD 279 (364)
Q Consensus 256 Dva~~~~~~l~~~~---~g~~~~i~~~ 279 (364)
|+|++++.++.... .|+++.+.+|
T Consensus 221 dvA~~v~fL~S~~a~~itG~~i~vDGG 247 (251)
T d1vl8a_ 221 DLKGVAVFLASEEAKYVTGQIIFVDGG 247 (251)
T ss_dssp GGHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred HHHHHHHHHhCchhCCCcCcEEEeCcC
Confidence 99999998886543 4899998776
|
| >d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Retinal dehydrogenase/reductase 3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.69 E-value=8.1e-16 Score=130.29 Aligned_cols=202 Identities=13% Similarity=0.008 Sum_probs=135.8
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhh--CCceEEEccCChhhH---------HhhccCcee
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQ--SGFDVHLFNANETAL---------MILTTLKNY 124 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~--~~~~~~~~D~~~~~~---------~~~~~~d~v 124 (364)
..+|++|||| ++.||+++++.|+++|++|++.+|+.+..+.+.+ .++.++.+|++|.+. +.+..+|++
T Consensus 4 l~GK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~iDil 83 (250)
T d1ydea1 4 YAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELPGAVFILCDVTQEDDVKTLVSETIRRFGRLDCV 83 (250)
T ss_dssp TTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEE
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhcCCCeEEEccCCCHHHHHHHHHHHHHhcCCCCEE
Confidence 5679999999 8999999999999999999999999877666543 567899999999663 122468888
Q ss_pred eEEEEecCCCCCCCC-hhh----hHHHHH----------HHHhhcCCccEEEEEccceeecCCCCccccCCCCCCCCChh
Q 017914 125 THLLVSIPPLEGTGD-PML----KHGELL----------RSTLMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANPTTEL 189 (364)
Q Consensus 125 ~~~~~~~~~~~~~~~-~~~----~~~~~l----------~~a~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y 189 (364)
+|.++.........+ ... ....|+ +..+++.+ .++|++||...+.... ....|
T Consensus 84 VnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~-G~Ii~isS~~~~~~~~-----------~~~~Y 151 (250)
T d1ydea1 84 VNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQ-GNVINISSLVGAIGQA-----------QAVPY 151 (250)
T ss_dssp EECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCHHHHHCCT-----------TCHHH
T ss_pred EecccccccccccccccHHHHHHHHHHhhhhHHHHHHHhhHHHHhCC-CCCccccccccccccc-----------Ccchh
Confidence 888875443322211 111 112222 22233333 5899999876442221 23589
Q ss_pred HHHHHHHHHHHHHhhhh---cCCcEEEEEecceecCC--------CCh---HHHHHHhcCcccccccccCCcccccccHH
Q 017914 190 GRLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPG--------RSS---VDTIIKQLPLSEGQKMRRARQYTSRIHVD 255 (364)
Q Consensus 190 ~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~--------~~~---~~~~~~~~~~~~~~~~~~~~~~~~~i~v~ 255 (364)
+.+|...+.+.+.++.+ .|++++.|.||.+-.+. ... +.......++ .-+...+
T Consensus 152 ~asKaal~~lt~~lA~e~a~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~pl------------~R~g~p~ 219 (250)
T d1ydea1 152 VATKGAVTAMTKALALDESPYGVRVNCISPGNIWTPLWEELAALMPDPRASIREGMLAQPL------------GRMGQPA 219 (250)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHHHTTSSSHHHHHHHHHHTSTT------------SSCBCHH
T ss_pred HHHHhhHHHHHHHHHHHhcccCeEEEEEeeCCCCChhHHHHhhcCCCHHHHHHHHHhcCCC------------CCCCCHH
Confidence 99999999999888754 48999999999885321 011 1111111111 1236689
Q ss_pred HHHHHHHHHccCCC--CCceEEEeCCCCC
Q 017914 256 DICQVLSASIDKPS--AWNVYNVVDDDPA 282 (364)
Q Consensus 256 Dva~~~~~~l~~~~--~g~~~~i~~~~~~ 282 (364)
|+|++++.++.... .|+++.+.+|..+
T Consensus 220 eva~~v~fL~Sda~~itG~~i~vDGG~~l 248 (250)
T d1ydea1 220 EVGAAAVFLASEANFCTGIELLVTGGAEL 248 (250)
T ss_dssp HHHHHHHHHHHHCTTCCSCEEEESTTTTS
T ss_pred HHHHHHHHHhCccCCCcCCeEEECCCccc
Confidence 99999998885322 4899999887543
|
| >d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 7-alpha-hydroxysteroid dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=99.68 E-value=7.8e-16 Score=130.94 Aligned_cols=200 Identities=13% Similarity=0.030 Sum_probs=135.5
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhh----h--CCceEEEccCChhhH---------Hhhcc
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELE----Q--SGFDVHLFNANETAL---------MILTT 120 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~----~--~~~~~~~~D~~~~~~---------~~~~~ 120 (364)
..+|++|||| ++.||++++++|+++|++|++.+|+.++.+.+. + .++.++.+|++|++. +.+..
T Consensus 9 L~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~l~~~g~~~~~~~~Dvs~~~~~~~~~~~~~~~~g~ 88 (255)
T d1fmca_ 9 LDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKLGK 88 (255)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 5679999999 899999999999999999999999887655432 2 357789999999663 22356
Q ss_pred CceeeEEEEecCCCCCCCChhhhH----HHHH----------HHHhhcCCccEEEEEccceeecCCCCccccCCCCCCCC
Q 017914 121 LKNYTHLLVSIPPLEGTGDPMLKH----GELL----------RSTLMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANPT 186 (364)
Q Consensus 121 ~d~v~~~~~~~~~~~~~~~~~~~~----~~~l----------~~a~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~ 186 (364)
+|.++|.++...... ++....++ ..|+ ...+++.+-.++|++||...+... ...
T Consensus 89 iDilvnnAG~~~~~~-~e~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Ii~isS~~~~~~~-----------~~~ 156 (255)
T d1fmca_ 89 VDILVNNAGGGGPKP-FDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKN-----------INM 156 (255)
T ss_dssp CCEEEECCCCCCCCC-TTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCC-----------TTC
T ss_pred CCEeeeCCcCCCCCc-ccCCHHHHHHHHHHHHHHhhhhHHHHHhhhccccccccccccccchhccc-----------ccc
Confidence 899999887544322 22111111 1222 222334455689999886543221 133
Q ss_pred ChhHHHHHHHHHHHHHhhhh---cCCcEEEEEecceecCC-CC-----hHHHHHHhcCcccccccccCCcccccccHHHH
Q 017914 187 TELGRLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPG-RS-----SVDTIIKQLPLSEGQKMRRARQYTSRIHVDDI 257 (364)
Q Consensus 187 ~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~-~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dv 257 (364)
..|+.+|...+.+.+.++.+ +|+++..|.||.+..+. .. ....+....+++ -+...+|+
T Consensus 157 ~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~e~~~~~~~~~pl~------------R~g~pedv 224 (255)
T d1fmca_ 157 TSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVITPEIEQKMLQHTPIR------------RLGQPQDI 224 (255)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCCHHHHHHHHHTCSSC------------SCBCHHHH
T ss_pred ccchhHHHHHHHHHHHHHHHhCccCeEEEEeeeCcCcChHhhccCCHHHHHHHHhcCCCC------------CCcCHHHH
Confidence 68999999999999988754 48999999999885432 01 112222222111 13568999
Q ss_pred HHHHHHHccCCC---CCceEEEeCCC
Q 017914 258 CQVLSASIDKPS---AWNVYNVVDDD 280 (364)
Q Consensus 258 a~~~~~~l~~~~---~g~~~~i~~~~ 280 (364)
|++++.++.... .|+++.+.+|.
T Consensus 225 A~~v~fL~S~~s~~itG~~i~vDGG~ 250 (255)
T d1fmca_ 225 ANAALFLCSPAASWVSGQILTVSGGG 250 (255)
T ss_dssp HHHHHHHHSGGGTTCCSCEEEESTTS
T ss_pred HHHHHHHhCchhcCCcCCEEEECcCc
Confidence 999999986543 48999998875
|
| >d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: R-specific alcohol dehydrogenase species: Lactobacillus brevis [TaxId: 1580]
Probab=99.68 E-value=2e-15 Score=128.11 Aligned_cols=204 Identities=10% Similarity=-0.053 Sum_probs=132.5
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhh-----hCCceEEEccCChhhH---------HhhccC
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELE-----QSGFDVHLFNANETAL---------MILTTL 121 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~-----~~~~~~~~~D~~~~~~---------~~~~~~ 121 (364)
..+|++|||| ++.||+++++.|+++|++|++.+|+.+..+.+. ..++.++.+|++|++. +.+..+
T Consensus 4 L~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~i 83 (251)
T d1zk4a1 4 LDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAFGPV 83 (251)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSSC
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCCCcEEEEEccCCCHHHHHHHHHHHHHHhCCc
Confidence 5679999999 999999999999999999999999887655432 1467889999999763 223468
Q ss_pred ceeeEEEEecCCCCCCCChhh----hHHHHH----------HHHhhcCCc-cEEEEEccceeecCCCCccccCCCCCCCC
Q 017914 122 KNYTHLLVSIPPLEGTGDPML----KHGELL----------RSTLMNGHL-QWLGYLSSTGVYGHSGGAWVDEDYPANPT 186 (364)
Q Consensus 122 d~v~~~~~~~~~~~~~~~~~~----~~~~~l----------~~a~~~~~~-~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~ 186 (364)
|+++|.++.........-... ....|+ +..+++.+. .++|++||...+-.. ...
T Consensus 84 DiLVnnAg~~~~~~~~~~~~~~~~~~~~vnl~g~~~~~~~~~~~m~~~~~gg~Ii~isS~~~~~~~-----------~~~ 152 (251)
T d1zk4a1 84 STLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVGD-----------PSL 152 (251)
T ss_dssp CEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTSCC-----------TTC
T ss_pred eEEEeccccccccchhcccccchhhhccccccccchhHHHHHHHHHhcCCCCceEeeeccceeccC-----------CCc
Confidence 888888866543321111111 112222 222334443 489999986533111 123
Q ss_pred ChhHHHHHHHHHHHHHhhh-----hcCCcEEEEEecceecCCC-ChH-HHHHHhcCcccccccccCCcccccccHHHHHH
Q 017914 187 TELGRLRLSAEKGWLNLGR-----DLGISAQVFRLGGIYGPGR-SSV-DTIIKQLPLSEGQKMRRARQYTSRIHVDDICQ 259 (364)
Q Consensus 187 ~~Y~~sK~~~E~~~~~~~~-----~~~~~~~ilRp~~v~g~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~ 259 (364)
..|+.+|...+.+.+.++. .+|+++..|.||.+..+.. ... ...... .....+ ..-+...+|+|+
T Consensus 153 ~~Y~asKaal~~lt~~lA~e~~l~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~--~~~~~p------l~R~~~pedvA~ 224 (251)
T d1zk4a1 153 GAYNASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDDLPGAEEAMS--QRTKTP------MGHIGEPNDIAY 224 (251)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHHHHTSTTHHHHHT--STTTCT------TSSCBCHHHHHH
T ss_pred hhHHHHHHHHhcchHHHHHHHhcCCCcEEEEEEeCCCCCChhHHhcCCHHHHHH--HHhCCC------CCCCcCHHHHHH
Confidence 5899999999998887653 4589999999998854320 000 000110 000001 112467899999
Q ss_pred HHHHHccCCC---CCceEEEeCC
Q 017914 260 VLSASIDKPS---AWNVYNVVDD 279 (364)
Q Consensus 260 ~~~~~l~~~~---~g~~~~i~~~ 279 (364)
+++.++.... .|+++.+.+|
T Consensus 225 ~v~fL~S~~s~~itG~~i~vDGG 247 (251)
T d1zk4a1 225 ICVYLASNESKFATGSEFVVDGG 247 (251)
T ss_dssp HHHHHHSGGGTTCCSCEEEESTT
T ss_pred HHHHHhCchhCCCcCcEEEECcc
Confidence 9999886542 4899998776
|
| >d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), I [TaxId: 4076]
Probab=99.68 E-value=2e-15 Score=128.62 Aligned_cols=201 Identities=11% Similarity=0.015 Sum_probs=131.6
Q ss_pred CCCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhh----h--CCceEEEccCChhhH--H----hhc---
Q 017914 56 WQSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELE----Q--SGFDVHLFNANETAL--M----ILT--- 119 (364)
Q Consensus 56 ~~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~----~--~~~~~~~~D~~~~~~--~----~~~--- 119 (364)
+..+|+||||| ++.||++++++|+++|++|++.+|++++.+.+. + ..+.++.+|+++.+. . ..+
T Consensus 3 ~L~gK~alITGas~GIG~aia~~la~~G~~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~ 82 (258)
T d1ae1a_ 3 SLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVFD 82 (258)
T ss_dssp CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTT
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEeecCCHHHHHHHHHHHHHHhC
Confidence 35689999999 999999999999999999999999987655432 2 345678899999663 1 112
Q ss_pred -cCceeeEEEEecCCCCCCCChhhhH----HHH----------HHHHhhcCCccEEEEEccceeecCCCCccccCCCCCC
Q 017914 120 -TLKNYTHLLVSIPPLEGTGDPMLKH----GEL----------LRSTLMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPAN 184 (364)
Q Consensus 120 -~~d~v~~~~~~~~~~~~~~~~~~~~----~~~----------l~~a~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~ 184 (364)
.+|+++|+++......-..-....+ ..| +...+...+..++|++||....... .
T Consensus 83 g~idilinnag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~~~g~ii~isS~~~~~~~-----------~ 151 (258)
T d1ae1a_ 83 GKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSAL-----------P 151 (258)
T ss_dssp SCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGGTSCC-----------T
T ss_pred CCcEEEeccccccccCccccCCHHHHhhhhhhcccccccccccccccccccccccccccccccccccc-----------c
Confidence 3567777665544322111111111 112 2222335566799999987643221 1
Q ss_pred CCChhHHHHHHHHHHHHHhhhh---cCCcEEEEEecceecCCCC-----------hHHHHHHhcCcccccccccCCcccc
Q 017914 185 PTTELGRLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRS-----------SVDTIIKQLPLSEGQKMRRARQYTS 250 (364)
Q Consensus 185 ~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (364)
....|+.+|...+.+.+.++.+ .|+++..|.||.+..+... ....+....++ .-
T Consensus 152 ~~~~Y~~sK~al~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~pl------------gR 219 (258)
T d1ae1a_ 152 SVSLYSASKGAINQMTKSLACEWAKDNIRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVKTPM------------GR 219 (258)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC-------------CHHHHHHHHHHSTT------------CS
T ss_pred cchhHHHHHHHHHHHHHHHHHhcCcCcEEEEEEeeCcccCcchhhhhhhhhhhHHHHHHHHhcCCC------------CC
Confidence 3358999999999999988754 4799999999998765311 11122222211 11
Q ss_pred cccHHHHHHHHHHHccCC---CCCceEEEeCC
Q 017914 251 RIHVDDICQVLSASIDKP---SAWNVYNVVDD 279 (364)
Q Consensus 251 ~i~v~Dva~~~~~~l~~~---~~g~~~~i~~~ 279 (364)
+...+|+|++++.++... -.|+.+.+.+|
T Consensus 220 ~~~pediA~~v~fL~S~~s~~itG~~i~vDGG 251 (258)
T d1ae1a_ 220 AGKPQEVSALIAFLCFPAASYITGQIIWADGG 251 (258)
T ss_dssp CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred CcCHHHHHHHHHHHhChhhCCCcCcEEEeCCC
Confidence 467899999999999644 24888888776
|
| >d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermotoga maritima [TaxId: 2336]
Probab=99.67 E-value=1.4e-15 Score=127.86 Aligned_cols=197 Identities=12% Similarity=0.014 Sum_probs=132.0
Q ss_pred CCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCChhhH---HhhccCceeeEEEEecCC
Q 017914 58 SPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETAL---MILTTLKNYTHLLVSIPP 133 (364)
Q Consensus 58 ~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~---~~~~~~d~v~~~~~~~~~ 133 (364)
.+|++|||| ++.||+++++.|+++|++|++.+|+.+..+ +.+.+++.+|+++.-. +.+..+|+++|.++....
T Consensus 3 kgK~~lVTGas~GIG~aia~~l~~~Ga~V~~~~r~~~~l~---~~~~~~~~~Dv~~~~~~~~~~~g~iD~lVnnAG~~~~ 79 (234)
T d1o5ia_ 3 RDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLK---RSGHRYVVCDLRKDLDLLFEKVKEVDILVLNAGGPKA 79 (234)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHH---HTCSEEEECCTTTCHHHHHHHSCCCSEEEECCCCCCC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHH---hcCCcEEEcchHHHHHHHHHHhCCCcEEEecccccCC
Confidence 468999999 899999999999999999999999876544 3567888999987422 555678888888864332
Q ss_pred CCCCCChhhh----HHHH----------HHHHhhcCCccEEEEEccceeecCCCCccccCCCCCCCCChhHHHHHHHHHH
Q 017914 134 LEGTGDPMLK----HGEL----------LRSTLMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANPTTELGRLRLSAEKG 199 (364)
Q Consensus 134 ~~~~~~~~~~----~~~~----------l~~a~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~~sK~~~E~~ 199 (364)
.....-...+ ...| ++..+++.+..++|++||........ ....|+.+|...+.+
T Consensus 80 ~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~G~ii~i~S~~~~~~~~-----------~~~~Y~asKaal~~l 148 (234)
T d1o5ia_ 80 GFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSVISPIE-----------NLYTSNSARMALTGF 148 (234)
T ss_dssp BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCT-----------TBHHHHHHHHHHHHH
T ss_pred cchhhhhhHHHHHHhhhhhhhhhhhhhccccccccccccccccccccccccccc-----------ccccchhHHHHHHHH
Confidence 2111111111 1122 22223345556899998865432222 335799999999998
Q ss_pred HHHhhhh---cCCcEEEEEecceecCCCC-h-----HHHHHHhcCcccccccccCCcccccccHHHHHHHHHHHccCCC-
Q 017914 200 WLNLGRD---LGISAQVFRLGGIYGPGRS-S-----VDTIIKQLPLSEGQKMRRARQYTSRIHVDDICQVLSASIDKPS- 269 (364)
Q Consensus 200 ~~~~~~~---~~~~~~ilRp~~v~g~~~~-~-----~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~- 269 (364)
.+.++.+ .|+++..|.||.+-.+... . ...+....++ .-+...+|+|++++.++....
T Consensus 149 tk~lA~ela~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~pl------------~R~~~pediA~~v~fL~S~~s~ 216 (234)
T d1o5ia_ 149 LKTLSFEVAPYGITVNCVAPGWTETERVKELLSEEKKKQVESQIPM------------RRMAKPEEIASVVAFLCSEKAS 216 (234)
T ss_dssp HHHHHHHHGGGTEEEEEEEECSBCCTTHHHHSCHHHHHHHHTTSTT------------SSCBCHHHHHHHHHHHHSGGGT
T ss_pred HHHHHHHhcccCeEEeecccCccchhhhhhhcCHHHHHHHHhcCCC------------CCCcCHHHHHHHHHHHhChhhc
Confidence 8888654 4899999999988665311 1 1111111111 123668999999998886543
Q ss_pred --CCceEEEeCCC
Q 017914 270 --AWNVYNVVDDD 280 (364)
Q Consensus 270 --~g~~~~i~~~~ 280 (364)
.|+++.+.+|-
T Consensus 217 ~itG~~i~vDGG~ 229 (234)
T d1o5ia_ 217 YLTGQTIVVDGGL 229 (234)
T ss_dssp TCCSCEEEESTTC
T ss_pred CCcCcEEEECccc
Confidence 48999988773
|
| >d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), II [TaxId: 4076]
Probab=99.67 E-value=1.2e-15 Score=130.06 Aligned_cols=202 Identities=10% Similarity=-0.029 Sum_probs=133.5
Q ss_pred CCCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhh----h--CCceEEEccCChhhH--H----h---hc
Q 017914 56 WQSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELE----Q--SGFDVHLFNANETAL--M----I---LT 119 (364)
Q Consensus 56 ~~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~----~--~~~~~~~~D~~~~~~--~----~---~~ 119 (364)
+..+|++|||| ++.||+++++.|+++|++|++.+|+.++.+.+. . ..+.++.+|++|.+. . . +.
T Consensus 5 ~L~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~~ 84 (259)
T d2ae2a_ 5 NLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHFH 84 (259)
T ss_dssp CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHTT
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEeeCCCHHHHHHHHHHHHHHhC
Confidence 45689999999 899999999999999999999999887765432 2 346788999999663 1 1 12
Q ss_pred -cCceeeEEEEecCCCCCCCChhh----hHHHHH----------HHHhhcCCccEEEEEccceeecCCCCccccCCCCCC
Q 017914 120 -TLKNYTHLLVSIPPLEGTGDPML----KHGELL----------RSTLMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPAN 184 (364)
Q Consensus 120 -~~d~v~~~~~~~~~~~~~~~~~~----~~~~~l----------~~a~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~ 184 (364)
.+|.++|.++............. ....|+ +..+++.+-.++|++||....... .
T Consensus 85 ~~idilvnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~-----------~ 153 (259)
T d2ae2a_ 85 GKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGALAV-----------P 153 (259)
T ss_dssp TCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGTSCC-----------T
T ss_pred CCceEEEECCceeccCccccCCHHHHHHHHhcccceeEEEEeeccchhhhhccccccccccccccccc-----------c
Confidence 47888888775443221111111 112222 222335556799999986533111 1
Q ss_pred CCChhHHHHHHHHHHHHHhhhh---cCCcEEEEEecceecCCC-----C-----hHHHHHHhcCcccccccccCCccccc
Q 017914 185 PTTELGRLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGR-----S-----SVDTIIKQLPLSEGQKMRRARQYTSR 251 (364)
Q Consensus 185 ~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~-----~-----~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (364)
....|+.+|...+.+.+.++.+ .|+++..|.||.+-.+.. . .+..+....++ .-+
T Consensus 154 ~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~pl------------~R~ 221 (259)
T d2ae2a_ 154 YEAVYGATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEMTIQDPEQKENLNKLIDRCAL------------RRM 221 (259)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSHHHHHHTTSHHHHHHHHHHHHTSTT------------CSC
T ss_pred cccchHHHHHHHHHHHHHHHHHhCcCceEEEEeeeCcccCHHHHhhhhchhhHHHHHHHHhcCCC------------CCC
Confidence 3367999999999999988754 489999999998854320 0 01111111111 113
Q ss_pred ccHHHHHHHHHHHccCCC---CCceEEEeCCC
Q 017914 252 IHVDDICQVLSASIDKPS---AWNVYNVVDDD 280 (364)
Q Consensus 252 i~v~Dva~~~~~~l~~~~---~g~~~~i~~~~ 280 (364)
...+|+|++++.++.... .|+++.+.+|-
T Consensus 222 g~pedvA~~v~fL~S~~s~~itG~~i~VDGG~ 253 (259)
T d2ae2a_ 222 GEPKELAAMVAFLCFPAASYVTGQIIYVDGGL 253 (259)
T ss_dssp BCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred cCHHHHHHHHHHHhCchhCCCcCcEEEECCCe
Confidence 568999999999887543 48999987763
|
| >d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: (s)-1-phenylethanol dehydrogenase species: Azoarcus sp. ebn1 [TaxId: 76114]
Probab=99.67 E-value=2.1e-15 Score=127.67 Aligned_cols=206 Identities=9% Similarity=-0.044 Sum_probs=129.8
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhh--hhhh--CCceEEEccCChhhH---------HhhccCc
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKK--ELEQ--SGFDVHLFNANETAL---------MILTTLK 122 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~--~l~~--~~~~~~~~D~~~~~~---------~~~~~~d 122 (364)
..+|.+|||| ++.||+++++.|+++|++|++.+|+..+.. .++. .++..+.+|++|.+. ..+..+|
T Consensus 3 L~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~G~iD 82 (247)
T d2ew8a1 3 LKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIRNLGRRVLTVKCDVSQPGDVEAFGKQVISTFGRCD 82 (247)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHHHcCCcEEEEEeeCCCHHHHHHHHHHHHHHcCCCC
Confidence 4578999999 899999999999999999999999764322 1222 457789999999763 1224688
Q ss_pred eeeEEEEecCCCCCCCChhh----hHHHH----------HHHHhhcCCccEEEEEccceeecCCCCccccCCCCCCCCCh
Q 017914 123 NYTHLLVSIPPLEGTGDPML----KHGEL----------LRSTLMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANPTTE 188 (364)
Q Consensus 123 ~v~~~~~~~~~~~~~~~~~~----~~~~~----------l~~a~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~ 188 (364)
+++|.++......-..-... ....| ++..+++.+-.++|++||....... .....
T Consensus 83 ilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~-----------~~~~~ 151 (247)
T d2ew8a1 83 ILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWLKI-----------EAYTH 151 (247)
T ss_dssp EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSCC-----------SSCHH
T ss_pred EEEECCCCCCCCChHhCCHHHhhhhheeehhhhhHHHHHHHhHHHhcCCCCccccccchhcccC-----------ccccc
Confidence 88888876443221111111 11122 2333345556789999987543211 12357
Q ss_pred hHHHHHHHHHHHHHhhh---hcCCcEEEEEecceecCCCCh--HHHHHHhcCcccccccccCCcccccccHHHHHHHHHH
Q 017914 189 LGRLRLSAEKGWLNLGR---DLGISAQVFRLGGIYGPGRSS--VDTIIKQLPLSEGQKMRRARQYTSRIHVDDICQVLSA 263 (364)
Q Consensus 189 Y~~sK~~~E~~~~~~~~---~~~~~~~ilRp~~v~g~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~ 263 (364)
|+.+|...+.+.+.++. ..|+++..|.||.+-.+.... ....... .... .....-+...+|+|++++.
T Consensus 152 Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~--~~~~-----~~~l~r~~~pedvA~~v~f 224 (247)
T d2ew8a1 152 YISTKAANIGFTRALASDLGKDGITVNAIAPSLVRTATTEASALSAMFDV--LPNM-----LQAIPRLQVPLDLTGAAAF 224 (247)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCC--------------------CT-----TSSSCSCCCTHHHHHHHHH
T ss_pred chhhhccHHHHHHHHHHHhcccCeEEEEEeeCCCCCccccccccchhHHH--HHHH-----hccCCCCCCHHHHHHHHHH
Confidence 99999999999988875 348999999999886543211 0000000 0000 0011123568999999999
Q ss_pred HccCCC---CCceEEEeCCC
Q 017914 264 SIDKPS---AWNVYNVVDDD 280 (364)
Q Consensus 264 ~l~~~~---~g~~~~i~~~~ 280 (364)
++.... .|+++.+.+|-
T Consensus 225 L~S~~s~~itG~~i~vDGG~ 244 (247)
T d2ew8a1 225 LASDDASFITGQTLAVDGGM 244 (247)
T ss_dssp HTSGGGTTCCSCEEEESSSC
T ss_pred HhCchhcCCcCCeEEECCCE
Confidence 987542 48999988774
|
| >d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Xylitol dehydrogenase species: Gluconobacter oxydans [TaxId: 442]
Probab=99.66 E-value=9e-16 Score=131.06 Aligned_cols=200 Identities=10% Similarity=-0.008 Sum_probs=132.3
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhh----h--CCceEEEccCChhhH---------Hhhcc
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELE----Q--SGFDVHLFNANETAL---------MILTT 120 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~----~--~~~~~~~~D~~~~~~---------~~~~~ 120 (364)
..+|++|||| ++.||+++++.|+++|++|++.+|+.+..+.+. . .++..+.+|++|.+. +.+..
T Consensus 3 L~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 82 (260)
T d1zema1 3 FNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDFGK 82 (260)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 4578999999 899999999999999999999999887655432 2 356789999999663 12246
Q ss_pred CceeeEEEEecCCCCCCCC-hhh----hHHHH----------HHHHhhcCCccEEEEEccceeecCCCCccccCCCCCCC
Q 017914 121 LKNYTHLLVSIPPLEGTGD-PML----KHGEL----------LRSTLMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANP 185 (364)
Q Consensus 121 ~d~v~~~~~~~~~~~~~~~-~~~----~~~~~----------l~~a~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~ 185 (364)
+|.++|.++.........+ ... ....| +...+.+.+-.++|++||...+.... .
T Consensus 83 iDilVnnaG~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~~~~~-----------~ 151 (260)
T d1zema1 83 IDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVKGPP-----------N 151 (260)
T ss_dssp CCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHSCCT-----------T
T ss_pred CCeehhhhccccccCccccccHHHHHhhccccccccccchhhHHhhhhhhcCCCCCeeechhhccCCc-----------c
Confidence 7888888775443222211 111 11122 22222344556999999876442221 2
Q ss_pred CChhHHHHHHHHHHHHHhhhh---cCCcEEEEEecceecCCCC-h--------------------HHHHHHhcCcccccc
Q 017914 186 TTELGRLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRS-S--------------------VDTIIKQLPLSEGQK 241 (364)
Q Consensus 186 ~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~-~--------------------~~~~~~~~~~~~~~~ 241 (364)
...|+.+|...+.+.+.++.+ .|++++.|.||.+-.+... . ...+....++
T Consensus 152 ~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl----- 226 (260)
T d1zema1 152 MAAYGTSKGAIIALTETAALDLAPYNIRVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGSVPM----- 226 (260)
T ss_dssp BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSHHHHHHHHHHHHHTCTTSCSSHHHHHHHHHHTSTT-----
T ss_pred hHHHHHHHHHHHHHHHHHHHHhhhhCCEEEEeccCcccCcchhhcchhhhhhhcccccccCHHHHHHHHHhcCCC-----
Confidence 257999999999999888754 4799999999988654210 0 0111111111
Q ss_pred cccCCcccccccHHHHHHHHHHHccCCC---CCceEEEeCC
Q 017914 242 MRRARQYTSRIHVDDICQVLSASIDKPS---AWNVYNVVDD 279 (364)
Q Consensus 242 ~~~~~~~~~~i~v~Dva~~~~~~l~~~~---~g~~~~i~~~ 279 (364)
.-+...+|+|++++.++.... .|+++.+.+|
T Consensus 227 -------~R~g~pedvA~~v~fL~S~~s~~itG~~i~VDGG 260 (260)
T d1zema1 227 -------RRYGDINEIPGVVAFLLGDDSSFMTGVNLPIAGG 260 (260)
T ss_dssp -------SSCBCGGGSHHHHHHHHSGGGTTCCSCEEEESCC
T ss_pred -------CCCcCHHHHHHHHHHHhCchhcCccCCeEEeCCC
Confidence 113568999999999987542 4888888664
|
| >d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Levodione reductase species: Corynebacterium aquaticum [TaxId: 144185]
Probab=99.66 E-value=5.6e-16 Score=132.11 Aligned_cols=211 Identities=12% Similarity=0.046 Sum_probs=134.3
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhh--------hCCceEEEccCChhhH---------Hhh
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELE--------QSGFDVHLFNANETAL---------MIL 118 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~--------~~~~~~~~~D~~~~~~---------~~~ 118 (364)
..+|++|||| ++.||+.+++.|+++|++|++.+|+.++.+... ..++..+.+|++|++. +.+
T Consensus 2 l~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~ 81 (258)
T d1iy8a_ 2 FTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTERF 81 (258)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCCeEEEEeccCCCHHHHHHHHHHHHHHh
Confidence 3568999999 899999999999999999999999887654332 1356788999999764 122
Q ss_pred ccCceeeEEEEecCCCCCCCC-hhh----hHHHHH----------HHHhhcCCccEEEEEccceeecCCCCccccCCCCC
Q 017914 119 TTLKNYTHLLVSIPPLEGTGD-PML----KHGELL----------RSTLMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPA 183 (364)
Q Consensus 119 ~~~d~v~~~~~~~~~~~~~~~-~~~----~~~~~l----------~~a~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~ 183 (364)
..+|.++|.++.........+ ... ....|+ ...++..+-.++|++||...+-..
T Consensus 82 G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~----------- 150 (258)
T d1iy8a_ 82 GRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIRGI----------- 150 (258)
T ss_dssp SCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSBC-----------
T ss_pred CCCCEEEECCcccccCCchhhhhhhHHHHHhhhhccchhhhhhhhHhhhhhhcCCCCcccccHhhccCC-----------
Confidence 468888888875433222211 111 112222 222334455689999986543111
Q ss_pred CCCChhHHHHHHHHHHHHHhhhh---cCCcEEEEEecceecCCCChHHHHHHhcCcccc----cccccCCcccccccHHH
Q 017914 184 NPTTELGRLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRSSVDTIIKQLPLSEG----QKMRRARQYTSRIHVDD 256 (364)
Q Consensus 184 ~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~i~v~D 256 (364)
.....|+.+|...+.+.+.++.+ .|+++..|.||.+..+. ............. ..........-+...+|
T Consensus 151 ~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~i~PG~v~T~~---~~~~~~~~~~~~~~~~~~~~~~~~pl~R~~~p~d 227 (258)
T d1iy8a_ 151 GNQSGYAAAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPM---VENSMKQLDPENPRKAAEEFIQVNPSKRYGEAPE 227 (258)
T ss_dssp SSBHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHH---HHHHHHHHCTTCHHHHHHHHHTTCTTCSCBCHHH
T ss_pred CCchHHHHHHHHHHHHHHHHHHHhCccCceEEEEeeCcccCHH---HHHHHhhcCcccHHHHHHHHHhcCCCCCCcCHHH
Confidence 12368999999999999888653 48999999999886432 1111111000000 00000000112366899
Q ss_pred HHHHHHHHccCCC---CCceEEEeCCCC
Q 017914 257 ICQVLSASIDKPS---AWNVYNVVDDDP 281 (364)
Q Consensus 257 va~~~~~~l~~~~---~g~~~~i~~~~~ 281 (364)
+|++++.++.... .|+++.+.+|..
T Consensus 228 vA~~v~fL~S~~s~~itG~~i~VDGG~s 255 (258)
T d1iy8a_ 228 IAAVVAFLLSDDASYVNATVVPIDGGQS 255 (258)
T ss_dssp HHHHHHHHTSGGGTTCCSCEEEESTTTT
T ss_pred HHHHHHHHhCchhcCCcCceEEcCcchh
Confidence 9999999987542 489999988754
|
| >d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Rhizome secoisolariciresinol dehydrogenase species: Mayapple (Podophyllum peltatum) [TaxId: 35933]
Probab=99.66 E-value=5e-15 Score=127.05 Aligned_cols=205 Identities=8% Similarity=-0.031 Sum_probs=135.3
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhh-----CCceEEEccCChhhH--H-------hhccC
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQ-----SGFDVHLFNANETAL--M-------ILTTL 121 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~-----~~~~~~~~D~~~~~~--~-------~~~~~ 121 (364)
..+|++|||| ++.||+.+++.|+++|++|++.+|+.++.+.+.+ ..+.++.+|++|++. . .+..+
T Consensus 4 L~gKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i 83 (268)
T d2bgka1 4 LQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAKHGKL 83 (268)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCCceEEEEccCCCHHHHHHHHHHHHHHcCCc
Confidence 5679999999 8999999999999999999999998877654422 346788999999763 1 22467
Q ss_pred ceeeEEEEecCCCC-CCCC-hhh----hHHHH----------HHHHhhcCCccEEEEEccceeecCCCCccccCCCCCCC
Q 017914 122 KNYTHLLVSIPPLE-GTGD-PML----KHGEL----------LRSTLMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANP 185 (364)
Q Consensus 122 d~v~~~~~~~~~~~-~~~~-~~~----~~~~~----------l~~a~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~ 185 (364)
|.++|+++...... ...+ ... ....| ++..+.+.+-.++|++||...+..... .
T Consensus 84 D~lVnnAG~~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~ii~iss~~~~~~~~~----------~ 153 (268)
T d2bgka1 84 DIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAGEG----------V 153 (268)
T ss_dssp CEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGTCCCTT----------S
T ss_pred ceeccccccccCCCcccccCcHHHHHHHHHHhhcchhhhhhhhcchHhhcCCCCccccccccccccccc----------c
Confidence 88998887644322 1111 111 11122 233334555668999988653311111 1
Q ss_pred CChhHHHHHHHHHHHHHhhhh---cCCcEEEEEecceecCCCC-h-------HHHHHHhcCcccccccccCCcccccccH
Q 017914 186 TTELGRLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRS-S-------VDTIIKQLPLSEGQKMRRARQYTSRIHV 254 (364)
Q Consensus 186 ~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~-~-------~~~~~~~~~~~~~~~~~~~~~~~~~i~v 254 (364)
...|+.+|...+.+.+.++.+ .|+++..|.||.+-.+... . ...+........ .-+...
T Consensus 154 ~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~----------gr~~~p 223 (268)
T d2bgka1 154 SHVYTATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVFGVDSSRVEELAHQAANLK----------GTLLRA 223 (268)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTSSSCCHHHHHHHHHHTCSSC----------SCCCCH
T ss_pred ccccchhHHHHHhCHHHHHHHhChhCeEEEecCCCCccChHHhhhhcCCHHHHHHHHHhccccC----------CCCcCH
Confidence 237999999999999888644 5899999999988765311 1 111111111000 123668
Q ss_pred HHHHHHHHHHccCC---CCCceEEEeCCCC
Q 017914 255 DDICQVLSASIDKP---SAWNVYNVVDDDP 281 (364)
Q Consensus 255 ~Dva~~~~~~l~~~---~~g~~~~i~~~~~ 281 (364)
+|+|++++.++... -.|+++.+.+|-.
T Consensus 224 edvA~~v~fL~S~~s~~itGq~i~VDGG~t 253 (268)
T d2bgka1 224 EDVADAVAYLAGDESKYVSGLNLVIDGGYT 253 (268)
T ss_dssp HHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred HHHHHHHHHHhChhhCCccCceEEECcCcc
Confidence 99999999998654 2489999988743
|
| >d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.66 E-value=1.5e-15 Score=129.48 Aligned_cols=207 Identities=13% Similarity=0.012 Sum_probs=124.3
Q ss_pred CCCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhh----h--CCceEEEccCChhhH--H-------hh-
Q 017914 56 WQSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELE----Q--SGFDVHLFNANETAL--M-------IL- 118 (364)
Q Consensus 56 ~~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~----~--~~~~~~~~D~~~~~~--~-------~~- 118 (364)
+..+|++|||| ++.||+++++.|+++|++|++.+|+.++.+.+. . .++..+.+|+++.+. . .+
T Consensus 5 ~LkgK~alVTGas~GIG~aiA~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~ 84 (259)
T d1xq1a_ 5 SLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMFG 84 (259)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHT
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHHHhC
Confidence 45679999999 999999999999999999999999987655432 1 357889999998653 1 12
Q ss_pred ccCceeeEEEEecCCCCCCCChhh----hHHHHHHH----------HhhcCCccEEEEEccceeecCCCCccccCCCCCC
Q 017914 119 TTLKNYTHLLVSIPPLEGTGDPML----KHGELLRS----------TLMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPAN 184 (364)
Q Consensus 119 ~~~d~v~~~~~~~~~~~~~~~~~~----~~~~~l~~----------a~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~ 184 (364)
..+|+++|+++............. ....|+.. .+++.+..++|++||....... .
T Consensus 85 g~idilvnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~-----------~ 153 (259)
T d1xq1a_ 85 GKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVSA-----------S 153 (259)
T ss_dssp TCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC--------------------
T ss_pred CCcccccccccccCCCchhhCCHHHHHHHHHHHhhhheeeehhhhhcccccccccccccccccccccc-----------c
Confidence 247888888876543321111111 11223322 2334455699999986543211 1
Q ss_pred CCChhHHHHHHHHHHHHHhhhh---cCCcEEEEEecceecCCCC-hHHHHHHhcCcccccccccCCcccccccHHHHHHH
Q 017914 185 PTTELGRLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRS-SVDTIIKQLPLSEGQKMRRARQYTSRIHVDDICQV 260 (364)
Q Consensus 185 ~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~ 260 (364)
....|+.+|.+.+.+.+.++.+ .|+++..|-||.+-.+... ....-.. ..+....+ ..-+...+|+|.+
T Consensus 154 ~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~V~PG~i~T~~~~~~~~~~~~-~~~~~~~p------l~R~~~pedvA~~ 226 (259)
T d1xq1a_ 154 VGSIYSATKGALNQLARNLACEWASDGIRANAVAPAVIATPLAEAVYDDEFK-KVVISRKP------LGRFGEPEEVSSL 226 (259)
T ss_dssp -CCHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCSCC--------------------------------CCGGGGHHH
T ss_pred ccccccccccchhhhhHHHHHHhcccCeEEEEeccCcccCHHhhhhchHHHH-HHHHhCCC------CCCCcCHHHHHHH
Confidence 2367999999999999888754 4899999999988654311 1100000 00000001 1113568999999
Q ss_pred HHHHccCCC---CCceEEEeCCC
Q 017914 261 LSASIDKPS---AWNVYNVVDDD 280 (364)
Q Consensus 261 ~~~~l~~~~---~g~~~~i~~~~ 280 (364)
++.++.... .|+.+.+.+|-
T Consensus 227 v~fL~S~~s~~iTG~~i~vDGG~ 249 (259)
T d1xq1a_ 227 VAFLCMPAASYITGQTICVDGGL 249 (259)
T ss_dssp HHHHTSGGGTTCCSCEEECCCCE
T ss_pred HHHHhCchhcCCcCcEEEeCCCE
Confidence 998886442 48888887763
|
| >d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 15-hydroxyprostaglandin dehydrogenase, PGDH species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.66 E-value=9e-16 Score=130.66 Aligned_cols=211 Identities=11% Similarity=-0.022 Sum_probs=132.0
Q ss_pred CCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhh--------hCCceEEEccCChhhH--H-------hhc
Q 017914 58 SPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELE--------QSGFDVHLFNANETAL--M-------ILT 119 (364)
Q Consensus 58 ~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~--------~~~~~~~~~D~~~~~~--~-------~~~ 119 (364)
.+|++|||| ++.||+++++.|+++|++|++.+|+.++..... ..++.++.+|++|.+. . .+.
T Consensus 2 ~GKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G 81 (254)
T d2gdza1 2 NGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHFG 81 (254)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCCcEEEEEeecCCHHHHHHHHHHHHHHcC
Confidence 468999999 899999999999999999999999877644321 1356788999999663 1 224
Q ss_pred cCceeeEEEEecCCCCCCCChhhhHHHHH----------HHHhhcC---CccEEEEEccceeecCCCCccccCCCCCCCC
Q 017914 120 TLKNYTHLLVSIPPLEGTGDPMLKHGELL----------RSTLMNG---HLQWLGYLSSTGVYGHSGGAWVDEDYPANPT 186 (364)
Q Consensus 120 ~~d~v~~~~~~~~~~~~~~~~~~~~~~~l----------~~a~~~~---~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~ 186 (364)
.+|.++|.++.... .+.......|+ +..+.+. ...++|++||...+-. ....
T Consensus 82 ~iDilVnnAg~~~~----~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~~~g~Iv~isS~~~~~~-----------~~~~ 146 (254)
T d2gdza1 82 RLDILVNNAGVNNE----KNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMP-----------VAQQ 146 (254)
T ss_dssp CCCEEEECCCCCCS----SSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSC-----------CTTC
T ss_pred CcCeeccccccccc----ccchheeeeehhhHHHHHHHHHHHHHHhhcCCCcEEEeeccHhhccC-----------CCCc
Confidence 57888887765332 22222222222 2222222 1357999998754321 1123
Q ss_pred ChhHHHHHHHHHHHHH--hh---hhcCCcEEEEEecceecCCCChHHHHHHhc---Cc-ccccccccCCcccccccHHHH
Q 017914 187 TELGRLRLSAEKGWLN--LG---RDLGISAQVFRLGGIYGPGRSSVDTIIKQL---PL-SEGQKMRRARQYTSRIHVDDI 257 (364)
Q Consensus 187 ~~Y~~sK~~~E~~~~~--~~---~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~---~~-~~~~~~~~~~~~~~~i~v~Dv 257 (364)
..|+.+|...+.+.+. ++ ...|+++..|.||.+-.+. +..+.... .. .....+.......-+...+|+
T Consensus 147 ~~Y~asKaal~~ltrs~ala~e~~~~gIrVN~I~PG~i~T~~---~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedv 223 (254)
T d2gdza1 147 PVYCASKHGIVGFTRSAALAANLMNSGVRLNAICPGFVNTAI---LESIEKEENMGQYIEYKDHIKDMIKYYGILDPPLI 223 (254)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESCBSSHH---HHGGGCHHHHGGGGGGHHHHHHHHHHHCCBCHHHH
T ss_pred cchHHHHHHHHHHHHHHHHHHHhcCCCEEEEEEEcCCCCChh---hhhccccccccccHHHHHHHHhcCCCCCCcCHHHH
Confidence 5799999999998774 22 2468999999999874321 11000000 00 000000000001123568999
Q ss_pred HHHHHHHccCCC-CCceEEEeCCCCCCHHH
Q 017914 258 CQVLSASIDKPS-AWNVYNVVDDDPAPREE 286 (364)
Q Consensus 258 a~~~~~~l~~~~-~g~~~~i~~~~~~s~~e 286 (364)
|++++.++..+. .|+++.+.+|..+.++|
T Consensus 224 A~~v~fL~s~~~itG~~i~VdGG~~~~~~~ 253 (254)
T d2gdza1 224 ANGLITLIEDDALNGAIMKITTSKGIHFQD 253 (254)
T ss_dssp HHHHHHHHHCTTCSSCEEEEETTTEEEECC
T ss_pred HHHHHHHHcCCCCCCCEEEECCCCeeeccc
Confidence 999999998653 48999999887665543
|
| >d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dehydrogenase/reductase SDR family member 6, DHRS6 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.66 E-value=2.5e-15 Score=127.10 Aligned_cols=202 Identities=11% Similarity=0.016 Sum_probs=136.6
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhh-CCceEEEccCChhhH-----HhhccCceeeEEEE
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQ-SGFDVHLFNANETAL-----MILTTLKNYTHLLV 129 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~-~~~~~~~~D~~~~~~-----~~~~~~d~v~~~~~ 129 (364)
..+|++|||| ++.||+++++.|+++|++|++.+|++++.+.+.+ .++.....|+.+.+. ..+..+|.++|+++
T Consensus 4 l~gK~alITGas~GIG~aia~~la~~G~~Vi~~~r~~~~l~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~id~lVn~ag 83 (245)
T d2ag5a1 4 LDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEKYPGIQTRVLDVTKKKQIDQFANEVERLDVLFNVAG 83 (245)
T ss_dssp TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGGGSTTEEEEECCTTCHHHHHHHHHHCSCCSEEEECCC
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhccCCceeeeeccccccccccccccccceeEEeccc
Confidence 5678999999 9999999999999999999999999887776644 567788889887553 33467899999887
Q ss_pred ecCCCCCCCChhhhH----HHH----------HHHHhhcCCccEEEEEccceeecCCCCccccCCCCCCCCChhHHHHHH
Q 017914 130 SIPPLEGTGDPMLKH----GEL----------LRSTLMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANPTTELGRLRLS 195 (364)
Q Consensus 130 ~~~~~~~~~~~~~~~----~~~----------l~~a~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~~sK~~ 195 (364)
..............+ ..| +...+...+..++|++||... . ..+......|+.+|..
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~--~--------~~~~~~~~~Y~~sKaa 153 (245)
T d2ag5a1 84 FVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVAS--S--------VKGVVNRCVYSTTKAA 153 (245)
T ss_dssp CCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBT--T--------TBCCTTBHHHHHHHHH
T ss_pred ccCCCChhhCCHHHHHHHHHHhhccchhHHHhhCcccccCCCceeeeeechhh--c--------cCCccchhHHHHHHHH
Confidence 655432111111111 112 222233445568999987531 0 0112234689999999
Q ss_pred HHHHHHHhhhh---cCCcEEEEEecceecCCCC-----------hHHHHHHhcCcccccccccCCcccccccHHHHHHHH
Q 017914 196 AEKGWLNLGRD---LGISAQVFRLGGIYGPGRS-----------SVDTIIKQLPLSEGQKMRRARQYTSRIHVDDICQVL 261 (364)
Q Consensus 196 ~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~ 261 (364)
.+.+++.++.+ .|+++..|.||.+-.+... ....+....++ .-+...+|+|+++
T Consensus 154 l~~l~r~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~pl------------~R~~~pedva~~v 221 (245)
T d2ag5a1 154 VIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQERIQARGNPEEARNDFLKRQKT------------GRFATAEEIAMLC 221 (245)
T ss_dssp HHHHHHHHHHHHGGGTEEEEEEEESCEECHHHHHHHHHSSSHHHHHHHHHHTCTT------------SSCEEHHHHHHHH
T ss_pred HHHHHHHHHHHhhhhCcEEEEEeeceeechhhHhhhhhhhhhHHHHHHHHhcCCC------------CCCcCHHHHHHHH
Confidence 99999998754 4899999999988654211 01111111111 1236689999999
Q ss_pred HHHccCCC---CCceEEEeCCC
Q 017914 262 SASIDKPS---AWNVYNVVDDD 280 (364)
Q Consensus 262 ~~~l~~~~---~g~~~~i~~~~ 280 (364)
..++.... .|+++.+.+|.
T Consensus 222 ~fL~s~~s~~iTG~~i~VDGG~ 243 (245)
T d2ag5a1 222 VYLASDESAYVTGNPVIIDGGW 243 (245)
T ss_dssp HHHHSGGGTTCCSCEEEECTTG
T ss_pred HHHhChhhCCCcCceEEeCCCc
Confidence 99997543 48999988764
|
| >d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: meso-2,3-butanediol dehydrogenase species: Klebsiella pneumoniae [TaxId: 573]
Probab=99.65 E-value=2.6e-15 Score=127.83 Aligned_cols=211 Identities=11% Similarity=0.009 Sum_probs=129.7
Q ss_pred CeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhh----h--CCceEEEccCChhhH---------HhhccCce
Q 017914 60 NRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELE----Q--SGFDVHLFNANETAL---------MILTTLKN 123 (364)
Q Consensus 60 ~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~----~--~~~~~~~~D~~~~~~---------~~~~~~d~ 123 (364)
|.+|||| ++.||+++++.|+++|++|++.+|+.++.+.+. + .++..+.+|++|.+. +.+..+|+
T Consensus 2 KValITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDi 81 (255)
T d1gega_ 2 KVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGFDV 81 (255)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCCCE
T ss_pred CEEEEcCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCccE
Confidence 4569999 899999999999999999999999987765432 2 356788999999764 12246788
Q ss_pred eeEEEEecCCCCCCCChhh----hHHHHHHHH----------hh-cCCccEEEEEccceeecCCCCccccCCCCCCCCCh
Q 017914 124 YTHLLVSIPPLEGTGDPML----KHGELLRST----------LM-NGHLQWLGYLSSTGVYGHSGGAWVDEDYPANPTTE 188 (364)
Q Consensus 124 v~~~~~~~~~~~~~~~~~~----~~~~~l~~a----------~~-~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~ 188 (364)
++|.|+......-..-... ....|+... +. ..+..++|++||...+.... ....
T Consensus 82 lVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~~~-----------~~~~ 150 (255)
T d1gega_ 82 IVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVGNP-----------ELAV 150 (255)
T ss_dssp EEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCT-----------TBHH
T ss_pred EEecccccccCcHHHhhhhhhhhhhhhcccchhhhhhhhcchhhhhccccccccccchhhcccCc-----------cccc
Confidence 8888875433211111111 111222221 12 33345799998865432211 2357
Q ss_pred hHHHHHHHHHHHHHhhh---hcCCcEEEEEecceecCCCC-hHHHHHHhcCcccc---cccccCCcccccccHHHHHHHH
Q 017914 189 LGRLRLSAEKGWLNLGR---DLGISAQVFRLGGIYGPGRS-SVDTIIKQLPLSEG---QKMRRARQYTSRIHVDDICQVL 261 (364)
Q Consensus 189 Y~~sK~~~E~~~~~~~~---~~~~~~~ilRp~~v~g~~~~-~~~~~~~~~~~~~~---~~~~~~~~~~~~i~v~Dva~~~ 261 (364)
|+.+|...+.+.+.++. ..|+++..|.||.+-.+... .............. ..........-+...+|+|+++
T Consensus 151 Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~R~~~peevA~~v 230 (255)
T d1gega_ 151 YSSSKFAVRGLTQTAARDLAPLGITVNGYCPGIVKTPMWAEIDRQVSEAAGKPLGYGTAEFAKRITLGRLSEPEDVAACV 230 (255)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHHHHHHHHHHHTCCTTHHHHHHHTTCTTCSCBCHHHHHHHH
T ss_pred chhCHHHHHhhHHHHHHHhhhhCcEEEEEecCcccChHHhhhhhhhHhhhcccchhHHHHHHhcCCCCCCcCHHHHHHHH
Confidence 99999999999988874 34899999999988543211 00111110000000 0000000011236789999999
Q ss_pred HHHccCCC---CCceEEEeCCCC
Q 017914 262 SASIDKPS---AWNVYNVVDDDP 281 (364)
Q Consensus 262 ~~~l~~~~---~g~~~~i~~~~~ 281 (364)
+.++.... .|+++.+.+|-.
T Consensus 231 ~fL~S~~a~~itG~~i~vDGG~~ 253 (255)
T d1gega_ 231 SYLASPDSDYMTGQSLLIDGGMV 253 (255)
T ss_dssp HHHHSGGGTTCCSCEEEESSSSS
T ss_pred HHHhCchhCCccCcEEEecCCEE
Confidence 99886542 489999888743
|
| >d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase species: Bacillus megaterium [TaxId: 1404]
Probab=99.65 E-value=2.6e-15 Score=128.02 Aligned_cols=207 Identities=9% Similarity=-0.088 Sum_probs=131.6
Q ss_pred CCCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchh-hhh----hhh--CCceEEEccCChhhH--H-------hh
Q 017914 56 WQSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMK-KKE----LEQ--SGFDVHLFNANETAL--M-------IL 118 (364)
Q Consensus 56 ~~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~-~~~----l~~--~~~~~~~~D~~~~~~--~-------~~ 118 (364)
+..+|++|||| ++.||+++++.|+++|++|++.+|+.++ .+. +.. ..+..+.+|++|.+. . .+
T Consensus 4 dL~gK~alITGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~ 83 (261)
T d1geea_ 4 DLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEF 83 (261)
T ss_dssp GGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHh
Confidence 35678999999 8999999999999999999999998643 222 222 346788999999763 1 22
Q ss_pred ccCceeeEEEEecCCCCCCCChhh----hHHHH----------HHHHhhcCCc-cEEEEEccceeecCCCCccccCCCCC
Q 017914 119 TTLKNYTHLLVSIPPLEGTGDPML----KHGEL----------LRSTLMNGHL-QWLGYLSSTGVYGHSGGAWVDEDYPA 183 (364)
Q Consensus 119 ~~~d~v~~~~~~~~~~~~~~~~~~----~~~~~----------l~~a~~~~~~-~r~v~~Ss~~vy~~~~~~~~~E~~~~ 183 (364)
..+|+++|.++.........-... ....| ++..+.+.+. .++|++||...+.. .
T Consensus 84 G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~~Iv~isS~~~~~~-----------~ 152 (261)
T d1geea_ 84 GKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIP-----------W 152 (261)
T ss_dssp SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSC-----------C
T ss_pred CCCCEeeccceecCCcchhhcCHHHHHHHHHHhcccchhHHHHHhhhhccccccccccccccchhccc-----------C
Confidence 467888888876543321111111 11122 2222333333 45888988653311 1
Q ss_pred CCCChhHHHHHHHHHHHHHhhhh---cCCcEEEEEecceecCCCCh-H--HHHHHhcCcccccccccCCcccccccHHHH
Q 017914 184 NPTTELGRLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRSS-V--DTIIKQLPLSEGQKMRRARQYTSRIHVDDI 257 (364)
Q Consensus 184 ~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dv 257 (364)
.....|+.+|...+.+.+.++.+ .|+++..|.||.+..+.... . ...... +....++ .-+...+|+
T Consensus 153 ~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~--~~~~~pl------~R~~~pedi 224 (261)
T d1geea_ 153 PLFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAEKFADPEQRAD--VESMIPM------GYIGEPEEI 224 (261)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGGHHHHHSHHHHHH--HHTTCTT------SSCBCHHHH
T ss_pred ccccccccCCccchhhHHHHHHHhhhhCcEEEEEeeCcCcCHhHhhhcCCHHHHHH--HHhcCCC------CCCCCHHHH
Confidence 12357999999999999888644 48999999999986543110 0 000000 0000011 113568999
Q ss_pred HHHHHHHccCCC---CCceEEEeCCCC
Q 017914 258 CQVLSASIDKPS---AWNVYNVVDDDP 281 (364)
Q Consensus 258 a~~~~~~l~~~~---~g~~~~i~~~~~ 281 (364)
|++++.++.... .|+++.+.+|..
T Consensus 225 A~~v~fL~S~~s~~itG~~i~vDGG~s 251 (261)
T d1geea_ 225 AAVAAWLASSEASYVTGITLFADGGMT 251 (261)
T ss_dssp HHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred HHHHHHHhCchhcCCcCCeEEECCCee
Confidence 999999886543 489999988753
|
| >d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: D(-)-3-hydroxybutyrate dehydrogenase species: Pseudomonas fragi [TaxId: 296]
Probab=99.65 E-value=1.6e-15 Score=129.66 Aligned_cols=212 Identities=7% Similarity=-0.083 Sum_probs=130.4
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCch-hhhhhh-------hCCceEEEccCChhhH--H-------hh
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVM-KKKELE-------QSGFDVHLFNANETAL--M-------IL 118 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~-~~~~l~-------~~~~~~~~~D~~~~~~--~-------~~ 118 (364)
..+|++|||| ++.||+++++.|+++|++|++.+|+.. ..+.+. ..++.++.+|++|.+. . .+
T Consensus 2 L~gK~alITGas~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 81 (260)
T d1x1ta1 2 LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQM 81 (260)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHH
T ss_pred CCcCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHh
Confidence 3578999998 999999999999999999999999743 332221 1357788999999764 1 22
Q ss_pred ccCceeeEEEEecCCCCCCCChhh----hHHHH----------HHHHhhcCCccEEEEEccceeecCCCCccccCCCCCC
Q 017914 119 TTLKNYTHLLVSIPPLEGTGDPML----KHGEL----------LRSTLMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPAN 184 (364)
Q Consensus 119 ~~~d~v~~~~~~~~~~~~~~~~~~----~~~~~----------l~~a~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~ 184 (364)
..+|+++|.|+.........-... ....| ++..+++.+-.++|++||...+... .
T Consensus 82 G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~-----------~ 150 (260)
T d1x1ta1 82 GRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLVAS-----------A 150 (260)
T ss_dssp SCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC-----------T
T ss_pred CCCcEEEeecccccCCchhhhhHHhhhhhhhccccccccccchhhhhHhhcCCceEeecccccceecc-----------C
Confidence 468999998876443221111111 11122 2233334555699999987543211 1
Q ss_pred CCChhHHHHHHHHHHHHHhhhh---cCCcEEEEEecceecCCC-ChHHHHHHhcCccc----ccccccCCcccccccHHH
Q 017914 185 PTTELGRLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGR-SSVDTIIKQLPLSE----GQKMRRARQYTSRIHVDD 256 (364)
Q Consensus 185 ~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~-~~~~~~~~~~~~~~----~~~~~~~~~~~~~i~v~D 256 (364)
....|+.+|...+.+.+.++.+ .|++++.|.||.+-.+.. ..+........... ...+.......-+...+|
T Consensus 151 ~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl~R~g~ped 230 (260)
T d1x1ta1 151 NKSAYVAAKHGVVGFTKVTALETAGQGITANAICPGWVRTPLVEKQISALAEKNGVDQETAARELLSEKQPSLQFVTPEQ 230 (260)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC------------------------CHHHHCTTCCCBCHHH
T ss_pred CcchhhhhhhhHHHhHHHHHHHhchhCcEEEEEecCCCCChhhhhhhhhhhhhcCCChHHHHHHHHHhcCCCCCCcCHHH
Confidence 3357999999999999988754 479999999998865431 11111111000000 000000001112467899
Q ss_pred HHHHHHHHccCC---CCCceEEEeCC
Q 017914 257 ICQVLSASIDKP---SAWNVYNVVDD 279 (364)
Q Consensus 257 va~~~~~~l~~~---~~g~~~~i~~~ 279 (364)
+|++++.++... -.|+++.+.+|
T Consensus 231 iA~~v~fL~S~~a~~itG~~i~vDGG 256 (260)
T d1x1ta1 231 LGGTAVFLASDAAAQITGTTVSVDGG 256 (260)
T ss_dssp HHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred HHHHHHHHhChhhCCCcCCEEEECcc
Confidence 999999988654 23899998776
|
| >d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Streptomyces coelicolor [TaxId: 1902]
Probab=99.65 E-value=1.6e-15 Score=129.43 Aligned_cols=210 Identities=10% Similarity=-0.001 Sum_probs=130.4
Q ss_pred CCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhh----h--CCceEEEccCChhhH---------HhhccCc
Q 017914 59 PNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELE----Q--SGFDVHLFNANETAL---------MILTTLK 122 (364)
Q Consensus 59 ~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~----~--~~~~~~~~D~~~~~~---------~~~~~~d 122 (364)
+|.+|||| ++.||+++++.|+++|++|++.+|+.++.+.+. + ..+..+.+|++|++. +.+..+|
T Consensus 2 gKValITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~iD 81 (257)
T d2rhca1 2 SEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYGPVD 81 (257)
T ss_dssp CCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCSCS
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHhCCCC
Confidence 57889999 899999999999999999999999877655432 2 356789999999764 1224578
Q ss_pred eeeEEEEecCCCCCCCChhh----hHHHHHH------HHh------hcCCccEEEEEccceeecCCCCccccCCCCCCCC
Q 017914 123 NYTHLLVSIPPLEGTGDPML----KHGELLR------STL------MNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANPT 186 (364)
Q Consensus 123 ~v~~~~~~~~~~~~~~~~~~----~~~~~l~------~a~------~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~ 186 (364)
+++|+|+......-..-... ....|+. .++ .+.+..++|++||...+.... ..
T Consensus 82 ilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~~~~~~~~~g~Ii~i~S~~~~~~~~-----------~~ 150 (257)
T d2rhca1 82 VLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVV-----------HA 150 (257)
T ss_dssp EEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTSHHHHTEEEEEEECCGGGTSCCT-----------TC
T ss_pred EEEecccccCCCChHHcCHHHHHHHHHHHhhhhhHHHHHHhHHHHHHhcCCcccccccccccccccc-----------cc
Confidence 88888875443221111111 1122222 211 234556899998865432211 23
Q ss_pred ChhHHHHHHHHHHHHHhhhh---cCCcEEEEEecceecCCCC-hHHHHHHhcCccccc---ccccCCcccccccHHHHHH
Q 017914 187 TELGRLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRS-SVDTIIKQLPLSEGQ---KMRRARQYTSRIHVDDICQ 259 (364)
Q Consensus 187 ~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~-~~~~~~~~~~~~~~~---~~~~~~~~~~~i~v~Dva~ 259 (364)
..|+.+|...+.+.+.++.+ .|+++..|.||.+-.+... ............... .+.......-+...+|+|+
T Consensus 151 ~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~e~~~~~~~~~PlgR~~~pedia~ 230 (257)
T d2rhca1 151 APYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPSEVAE 230 (257)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTTSEEEEEEEEECSBCSHHHHHHHHHHHHHTTCCHHHHHHHHHTTSTTSSCBCHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCCCCCHHHHHHHhhhhhhcccChHHHHHHHHhcCCCCCCcCHHHHHH
Confidence 57999999999999988755 4799999999988543210 000000000000000 0000000112366899999
Q ss_pred HHHHHccCC---CCCceEEEeCC
Q 017914 260 VLSASIDKP---SAWNVYNVVDD 279 (364)
Q Consensus 260 ~~~~~l~~~---~~g~~~~i~~~ 279 (364)
+++.++... -.|+++.+.+|
T Consensus 231 ~v~fL~S~~s~~itG~~i~vDGG 253 (257)
T d2rhca1 231 MVAYLIGPGAAAVTAQALNVCGG 253 (257)
T ss_dssp HHHHHTSGGGTTCCSCEEEESTT
T ss_pred HHHHHhCchhcCCcCceEEECcC
Confidence 999998654 23899998776
|
| >d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3beta/17beta hydroxysteroid dehydrogenase species: Comamonas testosteroni [TaxId: 285]
Probab=99.64 E-value=4.8e-15 Score=125.81 Aligned_cols=208 Identities=11% Similarity=-0.020 Sum_probs=132.3
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhh---CCceEEEccCChhhH---------HhhccCce
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQ---SGFDVHLFNANETAL---------MILTTLKN 123 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~---~~~~~~~~D~~~~~~---------~~~~~~d~ 123 (364)
..+|++|||| ++.||+++++.|+++|++|++.+|+.+..+.+.+ ....++.+|++|.+. +.+..+|.
T Consensus 4 L~gK~alITGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~iDi 83 (253)
T d1hxha_ 4 LQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGERSMFVRHDVSSEADWTLVMAAVQRRLGTLNV 83 (253)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCTTEEEECCCTTCHHHHHHHHHHHHHHHCSCCE
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCCeEEEEeecCCHHHHHHHHHHHHHHhCCCCe
Confidence 5678999999 8999999999999999999999998877655432 456788899999653 22246799
Q ss_pred eeEEEEecCCCCCCCChhh----hHHHH----------HHHHhhcCCccEEEEEccceeecCCCCccccCCCCCCCCChh
Q 017914 124 YTHLLVSIPPLEGTGDPML----KHGEL----------LRSTLMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANPTTEL 189 (364)
Q Consensus 124 v~~~~~~~~~~~~~~~~~~----~~~~~----------l~~a~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y 189 (364)
++|+++.........-... ....| ++..+++.+ .++|++||...+-. ......|
T Consensus 84 lVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~-G~Iv~isS~~~~~~-----------~~~~~~Y 151 (253)
T d1hxha_ 84 LVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETG-GSIINMASVSSWLP-----------IEQYAGY 151 (253)
T ss_dssp EEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTC-EEEEEECCGGGTSC-----------CTTBHHH
T ss_pred EEecccccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcC-CceecccchhhhcC-----------ccccccc
Confidence 9998876543221111111 11222 223333444 68999998754321 1123579
Q ss_pred HHHHHHHHHHHHHhhhh-----cCCcEEEEEecceecCCCChHHHHHHhcCcccc-cccccCCcccccccHHHHHHHHHH
Q 017914 190 GRLRLSAEKGWLNLGRD-----LGISAQVFRLGGIYGPGRSSVDTIIKQLPLSEG-QKMRRARQYTSRIHVDDICQVLSA 263 (364)
Q Consensus 190 ~~sK~~~E~~~~~~~~~-----~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~v~Dva~~~~~ 263 (364)
+.+|...+.+.+.++.+ +++++..|.||.+..+. ............. .....-...--+...+|+|++++.
T Consensus 152 ~asKaal~~lt~~lA~e~~~~g~~IrVN~I~PG~i~T~~---~~~~~~~~~~~~~~~~~~~~~~~gr~~~pedvA~~v~f 228 (253)
T d1hxha_ 152 SASKAAVSALTRAAALSCRKQGYAIRVNSIHPDGIYTPM---MQASLPKGVSKEMVLHDPKLNRAGRAYMPERIAQLVLF 228 (253)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESEECCHH---HHHHSCTTCCHHHHBCBTTTBTTCCEECHHHHHHHHHH
T ss_pred cchhHHHHHHHHHHHHHHhhcCCCEEEEEEeECCCcCHh---HHhhCcchhhHHHHHhCccccccCCCCCHHHHHHHHHH
Confidence 99999999998877643 35899999999885431 1111000000000 000000001124678999999999
Q ss_pred HccCCC---CCceEEEeCC
Q 017914 264 SIDKPS---AWNVYNVVDD 279 (364)
Q Consensus 264 ~l~~~~---~g~~~~i~~~ 279 (364)
++.... .|+++++.+|
T Consensus 229 L~S~~s~~itG~~i~VDGG 247 (253)
T d1hxha_ 229 LASDESSVMSGSELHADNS 247 (253)
T ss_dssp HHSGGGTTCCSCEEEESSS
T ss_pred HhChhhCCCcCcEEEECcc
Confidence 887543 4899998776
|
| >d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative dehydrogenase ARPG836 (MGC4172) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.62 E-value=2.5e-14 Score=121.72 Aligned_cols=204 Identities=11% Similarity=0.007 Sum_probs=129.6
Q ss_pred ccCCCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhh----h----CCceEEEccCChhhH---------
Q 017914 54 SEWQSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELE----Q----SGFDVHLFNANETAL--------- 115 (364)
Q Consensus 54 ~~~~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~----~----~~~~~~~~D~~~~~~--------- 115 (364)
|....+|.+|||| ++.||.++++.|+++|++|++.+|+.++.+.+. . ..+.++.+|+++++.
T Consensus 5 M~~lk~Kv~lITGas~GIG~aiA~~la~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~v~~~~ 84 (257)
T d1xg5a_ 5 MERWRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIR 84 (257)
T ss_dssp CGGGTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEEEccCCCHHHHHHHHHHHH
Confidence 4456678999999 999999999999999999999999987755532 2 246788999999763
Q ss_pred HhhccCceeeEEEEecCCCCCCCChhh----hHHHH----------HHHHhhcC--CccEEEEEccceeecCCCCccccC
Q 017914 116 MILTTLKNYTHLLVSIPPLEGTGDPML----KHGEL----------LRSTLMNG--HLQWLGYLSSTGVYGHSGGAWVDE 179 (364)
Q Consensus 116 ~~~~~~d~v~~~~~~~~~~~~~~~~~~----~~~~~----------l~~a~~~~--~~~r~v~~Ss~~vy~~~~~~~~~E 179 (364)
+.+..+|+++|+++......-..-... ....| ++..++.. +-.++|++||..-+...
T Consensus 85 ~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~------- 157 (257)
T d1xg5a_ 85 SQHSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRVL------- 157 (257)
T ss_dssp HHHCCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSCC-------
T ss_pred HhcCCCCEEEecccccCCCccccccHHHHHhhhhhhhhHHHHHHHHHHHHHHHhccCCCceEEEechHhcCCC-------
Confidence 223568999998876543321111111 11112 22222222 23589999986532111
Q ss_pred CCCCCCCChhHHHHHHHHHHHHHhhh-----hcCCcEEEEEecceecCC-----CChHHHHHHhcCcccccccccCCccc
Q 017914 180 DYPANPTTELGRLRLSAEKGWLNLGR-----DLGISAQVFRLGGIYGPG-----RSSVDTIIKQLPLSEGQKMRRARQYT 249 (364)
Q Consensus 180 ~~~~~~~~~Y~~sK~~~E~~~~~~~~-----~~~~~~~ilRp~~v~g~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (364)
|......|+.+|...+.+.+.++. ..++++..|.||.+-.+. +.....+....+ ..
T Consensus 158 --p~~~~~~Y~~sKaal~~ltr~la~el~~~~~~I~vn~i~PG~i~t~~~~~~~~~~~~~~~~~~~------------~~ 223 (257)
T d1xg5a_ 158 --PLSVTHFYSATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQFAFKLHDKDPEKAAATYE------------QM 223 (257)
T ss_dssp --SCGGGHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSHHHHHTTTCHHHHHHHHC--------------
T ss_pred --CCcccHHHHHHHHHHHhCHHHHHHHHHhCCCCEEEEEEeCCCCCChhhhhcChhhHHHHHhcCC------------CC
Confidence 111234699999999999988764 357999999998764322 011111111111 12
Q ss_pred ccccHHHHHHHHHHHccCCCC---CceEEEeC
Q 017914 250 SRIHVDDICQVLSASIDKPSA---WNVYNVVD 278 (364)
Q Consensus 250 ~~i~v~Dva~~~~~~l~~~~~---g~~~~i~~ 278 (364)
.++..+|+|++++.++..+.. |++.-..+
T Consensus 224 r~~~pedvA~~v~fL~s~~a~~itG~i~i~~~ 255 (257)
T d1xg5a_ 224 KCLKPEDVAEAVIYVLSTPAHIQIGDIQMRPT 255 (257)
T ss_dssp -CBCHHHHHHHHHHHHHSCTTEEEEEEEEEET
T ss_pred CCcCHHHHHHHHHHHhCChhcCeECCEEEEeC
Confidence 246799999999999887643 55543333
|
| >d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Peroxisomal trans 2-enoyl CoA reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.62 E-value=8e-15 Score=127.31 Aligned_cols=209 Identities=11% Similarity=0.001 Sum_probs=131.7
Q ss_pred CCCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhh-----------hCCceEEEccCChhhH--H-----
Q 017914 56 WQSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELE-----------QSGFDVHLFNANETAL--M----- 116 (364)
Q Consensus 56 ~~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~-----------~~~~~~~~~D~~~~~~--~----- 116 (364)
...+|++|||| ++.||+++++.|+++|++|++.+|+.++..... ..++..+.+|++|++. .
T Consensus 9 ~L~gKvalITGas~GIG~aia~~la~~Ga~Vvi~~r~~~~l~~~~~el~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~ 88 (297)
T d1yxma1 9 LLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKST 88 (297)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhhccccCceEEEEeccCCCHHHHHHHHHHH
Confidence 46789999998 899999999999999999999999877654321 1357788999999764 1
Q ss_pred --hhccCceeeEEEEecCCCCCCCChhh----hHHHHHH----------HHhhcCCccEEEEEccceeecCCCCccccCC
Q 017914 117 --ILTTLKNYTHLLVSIPPLEGTGDPML----KHGELLR----------STLMNGHLQWLGYLSSTGVYGHSGGAWVDED 180 (364)
Q Consensus 117 --~~~~~d~v~~~~~~~~~~~~~~~~~~----~~~~~l~----------~a~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~ 180 (364)
.+..+|+++|.++............. ....|+. ..+...+..++|++|+....+.
T Consensus 89 ~~~~G~iDiLVnnAg~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~Ii~~ss~~~~~~--------- 159 (297)
T d1yxma1 89 LDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVPTKAGF--------- 159 (297)
T ss_dssp HHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCCCTTCC---------
T ss_pred HHHhCCeEEEEeeccccccCchhhhhhhhhhhhhcccccchhhHHHHHHHhhccccccccccccccccccc---------
Confidence 22468888888765333221111111 1122222 2222444557888876432211
Q ss_pred CCCCCCChhHHHHHHHHHHHHHhhhh---cCCcEEEEEecceecCCCC-hHHHHHHhcCcccccccccCCcccccccHHH
Q 017914 181 YPANPTTELGRLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRS-SVDTIIKQLPLSEGQKMRRARQYTSRIHVDD 256 (364)
Q Consensus 181 ~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D 256 (364)
.....|+.+|.+.+.+.+.++.+ .|+++..|.||.+..+... ....... ...... .......-+...+|
T Consensus 160 ---~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~--~~~~~~--~~~~plgR~g~ped 232 (297)
T d1yxma1 160 ---PLAVHSGAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVENYGSWGQ--SFFEGS--FQKIPAKRIGVPEE 232 (297)
T ss_dssp ---TTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTGGGTTSGGGGG--GGGTTG--GGGSTTSSCBCTHH
T ss_pred ---cccccchhHHHHHHHHHHHHHHHhcccCceEEEeeeCcCcCcchhhhccccCH--HHHHHH--HhcCCCCCCcCHHH
Confidence 12357999999999999988754 4899999999998654310 0000000 000000 00000112356899
Q ss_pred HHHHHHHHccCCC---CCceEEEeCCC
Q 017914 257 ICQVLSASIDKPS---AWNVYNVVDDD 280 (364)
Q Consensus 257 va~~~~~~l~~~~---~g~~~~i~~~~ 280 (364)
+|++++.++.... .|+++.+.+|.
T Consensus 233 vA~~v~fL~Sd~s~~iTG~~i~VDGG~ 259 (297)
T d1yxma1 233 VSSVVCFLLSPAASFITGQSVDVDGGR 259 (297)
T ss_dssp HHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred HHHHHHHHhCchhcCcCCcEEEeCcCh
Confidence 9999999997543 48999998874
|
| >d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR) species: Human (Homo sapiens), [TaxId: 9606]
Probab=99.62 E-value=2e-14 Score=125.11 Aligned_cols=202 Identities=9% Similarity=-0.020 Sum_probs=129.9
Q ss_pred CCCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhh-------hCCceEEEccCChhhH---------Hhh
Q 017914 56 WQSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELE-------QSGFDVHLFNANETAL---------MIL 118 (364)
Q Consensus 56 ~~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~-------~~~~~~~~~D~~~~~~---------~~~ 118 (364)
...+|++|||| +|.||++++++|+++|++|++.+|+.++..... ...+..+.+|+++.+. ...
T Consensus 22 ~l~gK~alITGas~GIG~aiA~~la~~Ga~Vii~~r~~~~l~~~~~~l~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~ 101 (294)
T d1w6ua_ 22 SFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKVA 101 (294)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHhcCCceEEEEecccChHHHHHHhhhhhhhc
Confidence 45679999999 999999999999999999999999876644322 1456788999999663 122
Q ss_pred ccCceeeEEEEecCCCCCCCChhh----hHHHHHHH-----------HhhcCCccEEEEEccceeecCCCCccccCCCCC
Q 017914 119 TTLKNYTHLLVSIPPLEGTGDPML----KHGELLRS-----------TLMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPA 183 (364)
Q Consensus 119 ~~~d~v~~~~~~~~~~~~~~~~~~----~~~~~l~~-----------a~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~ 183 (364)
..+|+++|+++............. ....|+.. .....+...++.+|+........
T Consensus 102 g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~i~~~ss~~~~~~~~---------- 171 (294)
T d1w6ua_ 102 GHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGSG---------- 171 (294)
T ss_dssp CSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHHCCT----------
T ss_pred cccchhhhhhhhccccccccchhhhhhhheeeecccchhhhhhhhcccccccccccccccccchhhhccc----------
Confidence 467888888875443221111111 11111111 11133445677776654322211
Q ss_pred CCCChhHHHHHHHHHHHHHhhhh---cCCcEEEEEecceecCCCC--------hHHHHHHhcCcccccccccCCcccccc
Q 017914 184 NPTTELGRLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRS--------SVDTIIKQLPLSEGQKMRRARQYTSRI 252 (364)
Q Consensus 184 ~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~i 252 (364)
....|+.+|.+.+.+.+.++.+ .|+++..|.||.+-.+... ....+....+++ -+.
T Consensus 172 -~~~~YsasKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~pl~------------R~~ 238 (294)
T d1w6ua_ 172 -FVVPSASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRLDPTGTFEKEMIGRIPCG------------RLG 238 (294)
T ss_dssp -TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC------CCTTSHHHHHHHTTCTTS------------SCB
T ss_pred -ccchHHHHHHHHHHHHHHHHHHHhHhCeEEEEEccCccccchhhhccCCcHHHHHHHhhcCCCC------------CCC
Confidence 2357999999999999988744 4899999999998654311 112222221111 135
Q ss_pred cHHHHHHHHHHHccCCC---CCceEEEeCCC
Q 017914 253 HVDDICQVLSASIDKPS---AWNVYNVVDDD 280 (364)
Q Consensus 253 ~v~Dva~~~~~~l~~~~---~g~~~~i~~~~ 280 (364)
..+|+|+++..++.... .|+++.+.+|.
T Consensus 239 ~pediA~~v~fL~sd~s~~itG~~i~vDGG~ 269 (294)
T d1w6ua_ 239 TVEELANLAAFLCSDYASWINGAVIKFDGGE 269 (294)
T ss_dssp CHHHHHHHHHHHTSGGGTTCCSCEEEESTTH
T ss_pred CHHHHHHHHHHHhCchhcCCCCcEEEECCCh
Confidence 68999999999997543 48999998874
|
| >d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Oil seed rape (Brassica napus) [TaxId: 3708]
Probab=99.61 E-value=4.5e-15 Score=125.32 Aligned_cols=200 Identities=9% Similarity=-0.074 Sum_probs=127.2
Q ss_pred CeEEEEc-CChhhHHHHHHHHhCCCEEEEEEe-Cchhhhhhh----h--CCceEEEccCChhhH--H-------hhccCc
Q 017914 60 NRMLILG-MGFVGRIFAEKIKNQGWVVSGTCT-NVMKKKELE----Q--SGFDVHLFNANETAL--M-------ILTTLK 122 (364)
Q Consensus 60 ~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r-~~~~~~~l~----~--~~~~~~~~D~~~~~~--~-------~~~~~d 122 (364)
+.||||| ++.||++++++|+++|++|++.++ +.+..+.+. . .++.++.+|++|.+. . .+..+|
T Consensus 2 pV~lITGas~GIG~a~a~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD 81 (244)
T d1edoa_ 2 PVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGTID 81 (244)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSCCS
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCCCC
Confidence 4789998 899999999999999999988755 444433332 1 356788999999763 1 124678
Q ss_pred eeeEEEEecCCCCCCCChhh----hHHHH----------HHHHhhcCCccEEEEEccceeecCCCCccccCCCCCCCCCh
Q 017914 123 NYTHLLVSIPPLEGTGDPML----KHGEL----------LRSTLMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANPTTE 188 (364)
Q Consensus 123 ~v~~~~~~~~~~~~~~~~~~----~~~~~----------l~~a~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~ 188 (364)
.++|.++......-...... ....| ++..+++.+-.++|++||...+-... ....
T Consensus 82 iLVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~~~~~-----------~~~~ 150 (244)
T d1edoa_ 82 VVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGNI-----------GQAN 150 (244)
T ss_dssp EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCT-----------TCHH
T ss_pred ccccccccccccchhccchHHHHHHHhhhhhhHHHHHHHHHHHHHHcCCcEEEEEcChhhcCCCC-----------CCHH
Confidence 88888765443221111111 11122 23333344556999999976442211 2357
Q ss_pred hHHHHHHHHHHHHHhhhh---cCCcEEEEEecceecCC-CChHHHHHHh--cCcccccccccCCcccccccHHHHHHHHH
Q 017914 189 LGRLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPG-RSSVDTIIKQ--LPLSEGQKMRRARQYTSRIHVDDICQVLS 262 (364)
Q Consensus 189 Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~-~~~~~~~~~~--~~~~~~~~~~~~~~~~~~i~v~Dva~~~~ 262 (364)
|+.+|...+.+.+.++.+ .|+++..|.||.+-.+. .......... ...+. .-+...+|+|++++
T Consensus 151 Y~asKaal~~ltk~lA~el~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~pl----------~R~~~p~dvA~~v~ 220 (244)
T d1edoa_ 151 YAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDMTAKLGEDMEKKILGTIPL----------GRTGQPENVAGLVE 220 (244)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCHHHHHHHHTSCTT----------CSCBCHHHHHHHHH
T ss_pred HHHHHHHHHHChHHHHHHHhhhCcEEEEEecceeccHHHHHhhHHHHHHHHhcCCC----------CCCcCHHHHHHHHH
Confidence 999999999999988755 48999999999885431 1111111111 11111 11356899999999
Q ss_pred HHccCC----CCCceEEEeCCC
Q 017914 263 ASIDKP----SAWNVYNVVDDD 280 (364)
Q Consensus 263 ~~l~~~----~~g~~~~i~~~~ 280 (364)
.++..+ -.|+++.+.+|-
T Consensus 221 fLa~S~~a~~itG~~i~vdGG~ 242 (244)
T d1edoa_ 221 FLALSPAASYITGQAFTIDGGI 242 (244)
T ss_dssp HHHHCSGGGGCCSCEEEESTTT
T ss_pred HHHCCchhcCCcCCeEEeCCCe
Confidence 885333 248999988773
|
| >d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Halohydrin dehalogenase HheC species: Agrobacterium tumefaciens [TaxId: 358]
Probab=99.61 E-value=2.4e-15 Score=127.85 Aligned_cols=198 Identities=12% Similarity=0.065 Sum_probs=131.2
Q ss_pred eEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCChhhH---------HhhccCceeeEEEEe
Q 017914 61 RMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETAL---------MILTTLKNYTHLLVS 130 (364)
Q Consensus 61 ~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~---------~~~~~~d~v~~~~~~ 130 (364)
++|||| ++.||+.+++.|+++|++|++.+|+.+..+.+......+..+|+++.+. +.+..+|+++|.++.
T Consensus 2 TAlVTGas~GiG~aiA~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~~~dv~~~~~~~~~~~~~~~~~G~iDiLVnNAg~ 81 (252)
T d1zmta1 2 TAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFAETYPQLKPMSEQEPAELIEAVTSAYGQVDVLVSNDIF 81 (252)
T ss_dssp EEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHCTTSEECCCCSHHHHHHHHHHHHSCCCEEEEECCC
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhhhCcEEEeccCCHHHHHHHHHHHHHHcCCCCEEEECCcC
Confidence 689999 8999999999999999999999998877766654333455677776432 223468888888765
Q ss_pred cCCCCCCCC-hhhhH----HHH----------HHHHhhcCCccEEEEEccceeecCCCCccccCCCCCCCCChhHHHHHH
Q 017914 131 IPPLEGTGD-PMLKH----GEL----------LRSTLMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANPTTELGRLRLS 195 (364)
Q Consensus 131 ~~~~~~~~~-~~~~~----~~~----------l~~a~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~~sK~~ 195 (364)
........+ ...++ ..| ++..+++.+-.++|++||...+.... ....|+.+|..
T Consensus 82 ~~~~~~~~~~~~e~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~IV~isS~~~~~~~~-----------~~~~Y~asKaa 150 (252)
T d1zmta1 82 APEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPFGPWK-----------ELSTYTSARAG 150 (252)
T ss_dssp CCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTTSCCT-----------TCHHHHHHHHH
T ss_pred CCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhcccccceeecccccccccccc-----------ccccccccccc
Confidence 433222211 11111 122 22223344556899999875432211 23579999999
Q ss_pred HHHHHHHhhhh---cCCcEEEEEecceecCCCC-h------------HHHHHHhcCcccccccccCCcccccccHHHHHH
Q 017914 196 AEKGWLNLGRD---LGISAQVFRLGGIYGPGRS-S------------VDTIIKQLPLSEGQKMRRARQYTSRIHVDDICQ 259 (364)
Q Consensus 196 ~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~-~------------~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~ 259 (364)
.+.+.+.++.+ +|+++..|.||.+-.+... . ...+....+++ -+...+|+|+
T Consensus 151 l~~lt~~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~e~~~~~~~~~pl~------------R~g~pedvA~ 218 (252)
T d1zmta1 151 ACTLANALSKELGEYNIPVFAIGPNYLHSEDSPYFYPTEPWKTNPEHVAHVKKVTALQ------------RLGTQKELGE 218 (252)
T ss_dssp HHHHHHHHHHHHGGGTCCEEEEEESSBCCBTCCSSCBHHHHTTCHHHHHHHHHHSSSS------------SCBCHHHHHH
T ss_pred HHHHHHHHHHHhcccCcEEEEEecCCCcCcchhhhhhcccccCCHHHHHHHHhcCCCC------------CCcCHHHHHH
Confidence 99999988754 4899999999998765321 1 11122222211 1356899999
Q ss_pred HHHHHccCCC---CCceEEEeCCCC
Q 017914 260 VLSASIDKPS---AWNVYNVVDDDP 281 (364)
Q Consensus 260 ~~~~~l~~~~---~g~~~~i~~~~~ 281 (364)
+++.++.... .|+++.+.+|-.
T Consensus 219 ~v~fL~S~~s~~iTG~~i~vdGG~~ 243 (252)
T d1zmta1 219 LVAFLASGSCDYLTGQVFWLAGGFP 243 (252)
T ss_dssp HHHHHHTTSCGGGTTCEEEESTTCC
T ss_pred HHHHHhCchhcCCcCCeEEECCCce
Confidence 9999997653 389999988743
|
| >d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Drosophila alcohol dehydrogenase species: Fly (Drosophila lebanonensis) [TaxId: 7225]
Probab=99.59 E-value=5.6e-15 Score=125.47 Aligned_cols=202 Identities=8% Similarity=0.022 Sum_probs=131.3
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhh-------CCceEEEccCCh-hh-H--------Hhh
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQ-------SGFDVHLFNANE-TA-L--------MIL 118 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~-------~~~~~~~~D~~~-~~-~--------~~~ 118 (364)
..+|+||||| ++.||..++++|+++|++|+++.|+.++...+.+ .++.++.+|+++ .+ . +.+
T Consensus 3 l~gK~vlITGgs~GIG~~~A~~la~~G~~vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~ 82 (254)
T d1sbya1 3 LTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQL 82 (254)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEECCcccHHHHHHHHhhCCCCCEEEEEeecCCCHHHHHHHHHHHHHHc
Confidence 5679999998 8999999999999999999999997765443321 467889999974 22 2 122
Q ss_pred ccCceeeEEEEecCCCCCCCChhhhHHHHHHHHh----------hc---CCccEEEEEccceeecCCCCccccCCCCCCC
Q 017914 119 TTLKNYTHLLVSIPPLEGTGDPMLKHGELLRSTL----------MN---GHLQWLGYLSSTGVYGHSGGAWVDEDYPANP 185 (364)
Q Consensus 119 ~~~d~v~~~~~~~~~~~~~~~~~~~~~~~l~~a~----------~~---~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~ 185 (364)
..+|.+++.|+... ..+.......|+.... .+ ....++|++||...+... ..
T Consensus 83 g~iDilvnnAG~~~----~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~~~g~Ii~isS~~~~~~~-----------~~ 147 (254)
T d1sbya1 83 KTVDILINGAGILD----DHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNAI-----------HQ 147 (254)
T ss_dssp SCCCEEEECCCCCC----TTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCC-----------TT
T ss_pred CCCCEEEeCCCCCC----HHHHHHHHHHHhHHHHHHHHHHHHHhhhcccCCCceEEEEechhhccCC-----------CC
Confidence 45777777776432 1222223333433322 12 234689999886543221 12
Q ss_pred CChhHHHHHHHHHHHHHhhhh---cCCcEEEEEecceecCCCChHHHHHHhcC-cccc-cccccCCcccccccHHHHHHH
Q 017914 186 TTELGRLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRSSVDTIIKQLP-LSEG-QKMRRARQYTSRIHVDDICQV 260 (364)
Q Consensus 186 ~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~i~v~Dva~~ 260 (364)
...|+.+|.....+.+.++.+ .|++++.|.||.+..+- .+... .... .........+.....+++|++
T Consensus 148 ~~~Y~asKaal~~~t~~la~el~~~gIrVn~I~PG~v~T~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~e~va~~ 220 (254)
T d1sbya1 148 VPVYSASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTPL-------VHTFNSWLDVEPRVAELLLSHPTQTSEQCGQN 220 (254)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHSEEEEEEEECSEESHH-------HHSCCCGGGSCTTHHHHHTTSCCEEHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHhhccccCeEEEEEEeCCCcCcc-------ccccccchhHHHHHHhccccCCCCCHHHHHHH
Confidence 357999999999999888754 48999999999987531 11100 0000 000000011223568999999
Q ss_pred HHHHccCCCCCceEEEeCCC
Q 017914 261 LSASIDKPSAWNVYNVVDDD 280 (364)
Q Consensus 261 ~~~~l~~~~~g~~~~i~~~~ 280 (364)
++.+++....|+++.+.+|.
T Consensus 221 ~~~~~~~~~tG~vi~vdgG~ 240 (254)
T d1sbya1 221 FVKAIEANKNGAIWKLDLGT 240 (254)
T ss_dssp HHHHHHHCCTTCEEEEETTE
T ss_pred HHHhhhCCCCCCEEEECCCE
Confidence 99999877789999988873
|
| >d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Thermus thermophilus [TaxId: 274]
Probab=99.59 E-value=1.5e-14 Score=123.41 Aligned_cols=202 Identities=14% Similarity=0.046 Sum_probs=126.0
Q ss_pred CCCCCeEEEEc-CC--hhhHHHHHHHHhCCCEEEEEEeCchhhhhhh-----hCCceEEEccCChhhH--H-------hh
Q 017914 56 WQSPNRMLILG-MG--FVGRIFAEKIKNQGWVVSGTCTNVMKKKELE-----QSGFDVHLFNANETAL--M-------IL 118 (364)
Q Consensus 56 ~~~~~~vlVtG-tG--~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~-----~~~~~~~~~D~~~~~~--~-------~~ 118 (364)
+..+|++|||| +| .||++++++|+++|++|++..|+........ ......+.+|++|.+. . .+
T Consensus 5 ~L~gK~alITGas~~~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 84 (256)
T d1ulua_ 5 DLSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALGGALLFRADVTQDEELDALFAGVKEAF 84 (256)
T ss_dssp CCTTCEEEEESCCCSSSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHhhhccCcccccccccCCHHHHHHHHHHHHHhc
Confidence 45679999999 76 6999999999999999998888765433221 1356789999999763 1 12
Q ss_pred ccCceeeEEEEecCCCC---CCCC-hhh----hHHHHHHHH------hh--cCCccEEEEEccceeecCCCCccccCCCC
Q 017914 119 TTLKNYTHLLVSIPPLE---GTGD-PML----KHGELLRST------LM--NGHLQWLGYLSSTGVYGHSGGAWVDEDYP 182 (364)
Q Consensus 119 ~~~d~v~~~~~~~~~~~---~~~~-~~~----~~~~~l~~a------~~--~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~ 182 (364)
..+|+++|.++...... ...+ ... ....|+... +. ...-.++|++||.......
T Consensus 85 g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~Iv~isS~~~~~~~---------- 154 (256)
T d1ulua_ 85 GGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREGGGIVTLTYYASEKVV---------- 154 (256)
T ss_dssp SSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEECGGGTSBC----------
T ss_pred CCceEEEeccccccccccccchhhhhhhhhhHhhhhhHHHHHHHHHHHHHHhccCCEEEEEeehHhcCCC----------
Confidence 45677777765432111 1111 111 112222221 11 1112479999886543211
Q ss_pred CCCCChhHHHHHHHHHHHHHhhhh---cCCcEEEEEecceecCCCCh-------HHHHHHhcCcccccccccCCcccccc
Q 017914 183 ANPTTELGRLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRSS-------VDTIIKQLPLSEGQKMRRARQYTSRI 252 (364)
Q Consensus 183 ~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~i 252 (364)
.....|+.+|.+.+.+.+.++.+ +|+++..|.||.+..+.... ...+....+++ -+.
T Consensus 155 -~~~~~Y~asKaal~~ltr~lA~ela~~gIrVN~I~PG~i~t~~~~~~~~~~~~~~~~~~~~pl~------------R~~ 221 (256)
T d1ulua_ 155 -PKYNVMAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAARSIPGFTKMYDRVAQTAPLR------------RNI 221 (256)
T ss_dssp -TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC----------CHHHHHHHHHHSTTS------------SCC
T ss_pred -CCchHHHHHHHHHHHHHHHHHHHhcccCCEEeeeccceeeeccccchhhhHHHHHHHHhcCCCC------------CCc
Confidence 13367999999999999988754 48999999999887653211 12222222221 135
Q ss_pred cHHHHHHHHHHHccCCC---CCceEEEeCCC
Q 017914 253 HVDDICQVLSASIDKPS---AWNVYNVVDDD 280 (364)
Q Consensus 253 ~v~Dva~~~~~~l~~~~---~g~~~~i~~~~ 280 (364)
..+|+|++++.++.... .|+++.+.+|.
T Consensus 222 ~pedvA~~v~fL~S~~s~~itG~~i~VDGG~ 252 (256)
T d1ulua_ 222 TQEEVGNLGLFLLSPLASGITGEVVYVDAGY 252 (256)
T ss_dssp CHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred CHHHHHHHHHHHhCchhCCccCCeEEECcCE
Confidence 68999999999987543 48999988774
|
| >d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus, TTHB020 [TaxId: 274]
Probab=99.59 E-value=1e-14 Score=122.88 Aligned_cols=201 Identities=13% Similarity=0.038 Sum_probs=129.2
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhh---CCceEEEccCChhhH--H-------hhccCce
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQ---SGFDVHLFNANETAL--M-------ILTTLKN 123 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~---~~~~~~~~D~~~~~~--~-------~~~~~d~ 123 (364)
..+|++|||| ++.||+.+++.|+++|++|++.+|+.++...... .++.++++|+++++. . .+..+|+
T Consensus 3 l~gK~alItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~i~~~~~~i~~~~g~iDi 82 (241)
T d2a4ka1 3 LSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALEAEAIAVVADVSDPKAVEAVFAEALEEFGRLHG 82 (241)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCCSSEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCceEEEEecCCCHHHHHHHHHHHHHHhCCccE
Confidence 4578999998 9999999999999999999999999877654432 356788999999764 1 2246888
Q ss_pred eeEEEEecCCCCCCCChhh----hHHHHHHHHh------h--cCCccEEEEEccceeecCCCCccccCCCCCCCCChhHH
Q 017914 124 YTHLLVSIPPLEGTGDPML----KHGELLRSTL------M--NGHLQWLGYLSSTGVYGHSGGAWVDEDYPANPTTELGR 191 (364)
Q Consensus 124 v~~~~~~~~~~~~~~~~~~----~~~~~l~~a~------~--~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~~ 191 (364)
++|+++............. ....|+.... . ..+-+.++.+|+.+.... .....|+.
T Consensus 83 LinnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~k~~~~~~~~~~~i~~~ss~a~~~~------------~~~~~Y~~ 150 (241)
T d2a4ka1 83 VAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSVAGLGA------------FGLAHYAA 150 (241)
T ss_dssp EEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCCTTCCH------------HHHHHHHH
T ss_pred eccccccccccchhhhhccccccccccccccccccccccccccccccceeeccccccccc------------cCccccch
Confidence 8888765433221111111 1112222211 1 222334555555432110 01256999
Q ss_pred HHHHHHHHHHHhhhhc---CCcEEEEEecceecCCCC-----hHHHHHHhcCcccccccccCCcccccccHHHHHHHHHH
Q 017914 192 LRLSAEKGWLNLGRDL---GISAQVFRLGGIYGPGRS-----SVDTIIKQLPLSEGQKMRRARQYTSRIHVDDICQVLSA 263 (364)
Q Consensus 192 sK~~~E~~~~~~~~~~---~~~~~ilRp~~v~g~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~ 263 (364)
+|.+.|.+.+.++++. |+++..|.||.+-.+... ....+....++ .-+...+|+|++++.
T Consensus 151 sK~al~~lt~~lA~el~~~gIrvN~I~PG~v~T~~~~~~~~~~~~~~~~~~p~------------~r~~~p~dva~~v~f 218 (241)
T d2a4ka1 151 GKLGVVGLARTLALELARKGVRVNVLLPGLIQTPMTAGLPPWAWEQEVGASPL------------GRAGRPEEVAQAALF 218 (241)
T ss_dssp CSSHHHHHHHHHHHHHTTTTCEEEEEEECSBCCGGGTTSCHHHHHHHHHTSTT------------CSCBCHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHhHhCCEEeeeccCcCCCHHHHhhhHhHHHHHHhCCCC------------CCCcCHHHHHHHHHH
Confidence 9999999999997654 699999999988543211 11222222211 113568999999999
Q ss_pred HccCCC---CCceEEEeCCCC
Q 017914 264 SIDKPS---AWNVYNVVDDDP 281 (364)
Q Consensus 264 ~l~~~~---~g~~~~i~~~~~ 281 (364)
++.... .|+++.+.+|..
T Consensus 219 L~S~~s~~itG~~i~vDGG~s 239 (241)
T d2a4ka1 219 LLSEESAYITGQALYVDGGRS 239 (241)
T ss_dssp HHSGGGTTCCSCEEEESTTTT
T ss_pred HhcchhCCCcCceEEeCCCcc
Confidence 997542 488999888754
|
| >d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 17-beta-hydroxysteroid dehydrogenase type XI species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.58 E-value=2e-14 Score=121.05 Aligned_cols=185 Identities=8% Similarity=-0.062 Sum_probs=125.0
Q ss_pred CCCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhh------CCceEEEccCChhhH--H-------hhc
Q 017914 56 WQSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQ------SGFDVHLFNANETAL--M-------ILT 119 (364)
Q Consensus 56 ~~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~------~~~~~~~~D~~~~~~--~-------~~~ 119 (364)
+..++.||||| ++.||++++++|+++|++|++.+|+.++.+.+.+ .++..+.+|++|.+. . .+.
T Consensus 4 ~l~Gkv~lITGas~GIG~~ia~~la~~G~~V~l~~r~~~~l~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g 83 (244)
T d1yb1a_ 4 SVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEIG 83 (244)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHcC
Confidence 46789999999 8999999999999999999999999887655432 357889999999764 1 224
Q ss_pred cCceeeEEEEecCCCCCCCChhhh----HHHH----------HHHHhhcCCccEEEEEccceeecCCCCccccCCCCCCC
Q 017914 120 TLKNYTHLLVSIPPLEGTGDPMLK----HGEL----------LRSTLMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANP 185 (364)
Q Consensus 120 ~~d~v~~~~~~~~~~~~~~~~~~~----~~~~----------l~~a~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~ 185 (364)
.+|.++|+++.............. ...| ++..+.+.+-.++|++||...+.... .
T Consensus 84 ~idilinnag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~G~Iv~isS~~~~~~~~-----------~ 152 (244)
T d1yb1a_ 84 DVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHVSVP-----------F 152 (244)
T ss_dssp CCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-CCCHH-----------H
T ss_pred CCceeEeeccccccccccccchhHHHhhcceeeeccHHHHHHHhhhHHhcCCceEEEeecchhcCCCC-----------C
Confidence 578888877765443322211111 1122 22333456667999999976432111 1
Q ss_pred CChhHHHHHHHHHHHHHhhhh------cCCcEEEEEecceecCCCChHHHHHHhcCcccccccccCCcccccccHHHHHH
Q 017914 186 TTELGRLRLSAEKGWLNLGRD------LGISAQVFRLGGIYGPGRSSVDTIIKQLPLSEGQKMRRARQYTSRIHVDDICQ 259 (364)
Q Consensus 186 ~~~Y~~sK~~~E~~~~~~~~~------~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~ 259 (364)
...|+.+|.+.+.+.+.++.+ .|+.++.+.||.+-.+.-. . . .......+..+|+|+
T Consensus 153 ~~~Y~asKaal~~~~~~La~El~~~~~~gI~V~~i~PG~v~T~~~~-------~-----~-----~~~~~~~~~pe~va~ 215 (244)
T d1yb1a_ 153 LLAYCSSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIK-------N-----P-----STSLGPTLEPEEVVN 215 (244)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCSTT-------C-----T-----HHHHCCCCCHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHhhcCCCEEEEEEEcCCCCChhhh-------C-----c-----CccccCCCCHHHHHH
Confidence 257999999999999888653 3799999999987433210 0 0 001122356899999
Q ss_pred HHHHHccCC
Q 017914 260 VLSASIDKP 268 (364)
Q Consensus 260 ~~~~~l~~~ 268 (364)
.++..+...
T Consensus 216 ~i~~~~~~~ 224 (244)
T d1yb1a_ 216 RLMHGILTE 224 (244)
T ss_dssp HHHHHHHTT
T ss_pred HHHHHHhcC
Confidence 999888765
|
| >d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase species: Pseudomonas sp., lb400 [TaxId: 306]
Probab=99.57 E-value=1.7e-14 Score=124.15 Aligned_cols=209 Identities=11% Similarity=0.024 Sum_probs=128.8
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhh---CCceEEEccCChhhH---------HhhccCce
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQ---SGFDVHLFNANETAL---------MILTTLKN 123 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~---~~~~~~~~D~~~~~~---------~~~~~~d~ 123 (364)
..+|+||||| ++.||+++++.|+++|++|++.+|+.++...+.. .++..+.+|+++.+. +.+..+|.
T Consensus 3 L~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~idi 82 (276)
T d1bdba_ 3 LKGEAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELETDHGDNVLGIVGDVRSLEDQKQAASRCVARFGKIDT 82 (276)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCCeeEEecccccHHHHHHHHHHHHHHhCCccc
Confidence 4578999999 8999999999999999999999999877655432 457889999999663 12346788
Q ss_pred eeEEEEecCCCCCC----CCh----h-hhHHHHH----------HHHhhcCCccEEEEEccceeecCCCCccccCCCCCC
Q 017914 124 YTHLLVSIPPLEGT----GDP----M-LKHGELL----------RSTLMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPAN 184 (364)
Q Consensus 124 v~~~~~~~~~~~~~----~~~----~-~~~~~~l----------~~a~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~ 184 (364)
++|.++........ .+. + .....|+ +..+++.+ .++|++||...+-.. .
T Consensus 83 lvnnAG~~~~~~~~~~~~~e~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~-g~iI~i~S~~~~~~~-----------~ 150 (276)
T d1bdba_ 83 LIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGYIHAVKACLPALVASR-GNVIFTISNAGFYPN-----------G 150 (276)
T ss_dssp EECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGTSTT-----------S
T ss_pred ccccccccCCCCccccccccchhhhhhHHHHHhhHHHHHHHHHHHHHHHhcC-CCceeeeechhccCC-----------C
Confidence 88888754432211 110 1 1111222 22233333 478888775432111 1
Q ss_pred CCChhHHHHHHHHHHHHHhhhhc--CCcEEEEEecceecCCCChH-----HHHHHhcCcccccccccCCcccccccHHHH
Q 017914 185 PTTELGRLRLSAEKGWLNLGRDL--GISAQVFRLGGIYGPGRSSV-----DTIIKQLPLSEGQKMRRARQYTSRIHVDDI 257 (364)
Q Consensus 185 ~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~ilRp~~v~g~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dv 257 (364)
....|+.+|...+.+.+.++.+. ++++..|.||.+-.+-.... ........... .........-+...+|+
T Consensus 151 ~~~~Y~asKaal~~ltr~lA~ela~~IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~--~~~~~~PlgR~g~peev 228 (276)
T d1bdba_ 151 GGPLYTAAKHAIVGLVRELAFELAPYVRVNGVGSGGINSDLRGPSSLGMGSKAISTVPLAD--MLKSVLPIGRMPEVEEY 228 (276)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCSCCCCCGGGC---------CHHH--HHTTTCTTSSCCCGGGG
T ss_pred CCchHHHHHHHHHHHHHHHHHHhhcceEEcccCCCCEecCcCCccchhhhhhccCcHHHHH--HHHhcCCCCCCcCHHHH
Confidence 23579999999999988887543 48999999998865421110 00000000000 00000000113557999
Q ss_pred HHHHHHHccCC----CCCceEEEeCC
Q 017914 258 CQVLSASIDKP----SAWNVYNVVDD 279 (364)
Q Consensus 258 a~~~~~~l~~~----~~g~~~~i~~~ 279 (364)
|++++.++..+ -.|+++++.+|
T Consensus 229 a~~v~fL~S~~~a~~itG~~i~VDGG 254 (276)
T d1bdba_ 229 TGAYVFFATRGDAAPATGALLNYDGG 254 (276)
T ss_dssp SHHHHHHHCHHHHTTCSSCEEEESSS
T ss_pred HHHHHHHcCCcccCCeeCcEEEECcC
Confidence 99998877532 34899999776
|
| >d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase (5l265) species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=99.57 E-value=5.7e-14 Score=120.09 Aligned_cols=200 Identities=16% Similarity=0.048 Sum_probs=125.1
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhh---------CCceEEEccCChhhH--H-------h
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQ---------SGFDVHLFNANETAL--M-------I 117 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~---------~~~~~~~~D~~~~~~--~-------~ 117 (364)
..+|.+|||| ++.||++++++|+++|++|++.+|+.++.+.+.+ .++..+.+|+++.+. . .
T Consensus 3 l~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~ 82 (264)
T d1spxa_ 3 FAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLGK 82 (264)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcCceEEEEccCCCHHHHHHHHHHHHHH
Confidence 4578999999 9999999999999999999999999876554321 347889999999663 1 2
Q ss_pred hccCceeeEEEEecCCCCC---CC-Chhh----hHHHHHH----------HHhhcCCccEEEEEcc-ceeecCCCCcccc
Q 017914 118 LTTLKNYTHLLVSIPPLEG---TG-DPML----KHGELLR----------STLMNGHLQWLGYLSS-TGVYGHSGGAWVD 178 (364)
Q Consensus 118 ~~~~d~v~~~~~~~~~~~~---~~-~~~~----~~~~~l~----------~a~~~~~~~r~v~~Ss-~~vy~~~~~~~~~ 178 (364)
+..+|+++|+++....... .. ...+ ....|+. ..+++.+ .++|.++| .+.+...
T Consensus 83 ~g~iDilvnnAG~~~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~p~m~~~~-g~iI~~~S~~~~~~~~------ 155 (264)
T d1spxa_ 83 FGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTK-GEIVNISSIASGLHAT------ 155 (264)
T ss_dssp HSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCTTSSSSCC------
T ss_pred hCCCCEeecccccccCCccccccccCCHHHHHHHHHHhHHHHHHHHhhhCCcccccc-CcceeeeeeccccccC------
Confidence 2468999998875432211 01 0111 1122222 2222333 35555554 3322111
Q ss_pred CCCCCCCCChhHHHHHHHHHHHHHhhhh---cCCcEEEEEecceecCCCChH--------------HHHHHhcCcccccc
Q 017914 179 EDYPANPTTELGRLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRSSV--------------DTIIKQLPLSEGQK 241 (364)
Q Consensus 179 E~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~--------------~~~~~~~~~~~~~~ 241 (364)
.....|+.+|.+.+.+.+.++.+ .|++++.|.||.+-.+..... ..+....++
T Consensus 156 -----~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl----- 225 (264)
T d1spxa_ 156 -----PDFPYYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKECVPA----- 225 (264)
T ss_dssp -----TTSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC--------------HHHHHHHHHHCTT-----
T ss_pred -----CCchhhhhhhhhHHHHHHHHHHHhcccCeEEEEEeeCCCCCcchhccCCcHHHHHHHHHHHHHHHhcCCC-----
Confidence 12356999999999999888754 489999999998865431110 011111111
Q ss_pred cccCCcccccccHHHHHHHHHHHccCC----CCCceEEEeCCC
Q 017914 242 MRRARQYTSRIHVDDICQVLSASIDKP----SAWNVYNVVDDD 280 (364)
Q Consensus 242 ~~~~~~~~~~i~v~Dva~~~~~~l~~~----~~g~~~~i~~~~ 280 (364)
.-+...+|+|++++.++..+ -.|+++.+.+|.
T Consensus 226 -------~R~g~pedvA~~v~fL~S~~~s~~itG~~i~vDGG~ 261 (264)
T d1spxa_ 226 -------GVMGQPQDIAEVIAFLADRKTSSYIIGHQLVVDGGS 261 (264)
T ss_dssp -------SSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTG
T ss_pred -------CCCcCHHHHHHHHHHHhCCcccCCccCceEEeCCCh
Confidence 11356899999999988643 358999988774
|
| >d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein F25D1.5 species: Caenorhabditis elegans [TaxId: 6239]
Probab=99.57 E-value=5.7e-14 Score=120.68 Aligned_cols=206 Identities=11% Similarity=-0.000 Sum_probs=131.8
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhh----h-----CCceEEEccCChhhH--H-------h
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELE----Q-----SGFDVHLFNANETAL--M-------I 117 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~----~-----~~~~~~~~D~~~~~~--~-------~ 117 (364)
..+|++|||| ++.||+++++.|+++|++|++.+|+.++.+.+. + .++..+.+|++|++. . .
T Consensus 2 L~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 81 (274)
T d1xhla_ 2 FSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLAK 81 (274)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCCCcceEEEEeeCCCHHHHHHHHHHHHHH
Confidence 3578999999 899999999999999999999999887655432 1 246789999999763 1 2
Q ss_pred hccCceeeEEEEecCCCCC-CC-Chhh----hHHHHH----------HHHhhcCCccEEEEEccceeecCCCCccccCCC
Q 017914 118 LTTLKNYTHLLVSIPPLEG-TG-DPML----KHGELL----------RSTLMNGHLQWLGYLSSTGVYGHSGGAWVDEDY 181 (364)
Q Consensus 118 ~~~~d~v~~~~~~~~~~~~-~~-~~~~----~~~~~l----------~~a~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~ 181 (364)
+..+|+++|+++....... .. .... ....|+ ...+++.+..+++++||...+....
T Consensus 82 ~G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~ii~~ss~~~~~~~~-------- 153 (274)
T d1xhla_ 82 FGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTKGEIVNVSSIVAGPQAHS-------- 153 (274)
T ss_dssp HSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGSSSCCT--------
T ss_pred cCCceEEEeecccccccccccccCCHHHHHHHHhhcccccccccccccccccccccccccchhhhhccccCC--------
Confidence 2467888888765332211 11 1111 112222 2223345556788888754321111
Q ss_pred CCCCCChhHHHHHHHHHHHHHhhhh---cCCcEEEEEecceecCCC-----C--h---HHHHHHhcCcccccccccCCcc
Q 017914 182 PANPTTELGRLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGR-----S--S---VDTIIKQLPLSEGQKMRRARQY 248 (364)
Q Consensus 182 ~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~-----~--~---~~~~~~~~~~~~~~~~~~~~~~ 248 (364)
....|+.+|...+.+.+.++.+ .|++++.|.||.+-.+.. . . ...+..... ...++
T Consensus 154 ---~~~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~--~~iPl------ 222 (274)
T d1xhla_ 154 ---GYPYYACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGSRK--ECIPV------ 222 (274)
T ss_dssp ---TSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCT--TTCTT------
T ss_pred ---CCceehhhhhHHHHHHHHHHHHHhHhCCceeeeccCCCcCchhhhhcccchhhHHHHHHHHHHH--cCCCC------
Confidence 2357999999999999887644 489999999999865421 0 0 111111100 00011
Q ss_pred cccccHHHHHHHHHHHccCC----CCCceEEEeCCCC
Q 017914 249 TSRIHVDDICQVLSASIDKP----SAWNVYNVVDDDP 281 (364)
Q Consensus 249 ~~~i~v~Dva~~~~~~l~~~----~~g~~~~i~~~~~ 281 (364)
.-+...+|+|++++.++..+ -.|+++.+.+|..
T Consensus 223 gR~g~pediA~~v~fL~S~d~s~~itG~~i~vDGG~~ 259 (274)
T d1xhla_ 223 GHCGKPEEIANIIVFLADRNLSSYIIGQSIVADGGST 259 (274)
T ss_dssp SSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGG
T ss_pred CCCcCHHHHHHHHHHHcCCccccCccCcEEEeCcCHH
Confidence 11356899999999888632 3589999988853
|
| >d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Mannitol dehydrogenase species: Mushroom (Agaricus bisporus) [TaxId: 5341]
Probab=99.56 E-value=3.1e-14 Score=121.50 Aligned_cols=209 Identities=9% Similarity=-0.018 Sum_probs=130.2
Q ss_pred CCCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhh-------hCCceEEEccCChhhH--H-------hh
Q 017914 56 WQSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELE-------QSGFDVHLFNANETAL--M-------IL 118 (364)
Q Consensus 56 ~~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~-------~~~~~~~~~D~~~~~~--~-------~~ 118 (364)
+..+|++|||| ++.||+++++.|+++|++|++.+|+.++..... ..++..+.+|++|++. . .+
T Consensus 6 ~l~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 85 (260)
T d1h5qa_ 6 SFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDADL 85 (260)
T ss_dssp CCTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHS
T ss_pred cCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHh
Confidence 35679999999 899999999999999999999999877654321 1457889999999764 1 12
Q ss_pred ccCceeeEEEEecCCCCCCCChhh----hHHHHHH----------HHh-hcCCccEEEEEccceeecCCCCccccCCCCC
Q 017914 119 TTLKNYTHLLVSIPPLEGTGDPML----KHGELLR----------STL-MNGHLQWLGYLSSTGVYGHSGGAWVDEDYPA 183 (364)
Q Consensus 119 ~~~d~v~~~~~~~~~~~~~~~~~~----~~~~~l~----------~a~-~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~ 183 (364)
..+|+++|+++.........-... ....|+. ..+ ++.+..+++..|+...+...... . .+.
T Consensus 86 g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~~g~i~~~~s~~~~~~~~~~-~---~~~ 161 (260)
T d1h5qa_ 86 GPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSS-L---NGS 161 (260)
T ss_dssp CSEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEEE-T---TEE
T ss_pred CCCcEecccccccccCCHHHhccccccccccccccchhhhhhhhcccccccccceEEEEeeccccccccccc-c---ccC
Confidence 356777777654332211111111 1122222 222 23444566666665432211100 0 011
Q ss_pred CCCChhHHHHHHHHHHHHHhhh---hcCCcEEEEEecceecCCCC-----hHHHHHHhcCcccccccccCCcccccccHH
Q 017914 184 NPTTELGRLRLSAEKGWLNLGR---DLGISAQVFRLGGIYGPGRS-----SVDTIIKQLPLSEGQKMRRARQYTSRIHVD 255 (364)
Q Consensus 184 ~~~~~Y~~sK~~~E~~~~~~~~---~~~~~~~ilRp~~v~g~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~ 255 (364)
.....|+.+|.+.+.+.+.++. ..|+++..|.||.+-.+... ....+....+++ -+...+
T Consensus 162 ~~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~pl~------------R~g~pe 229 (260)
T d1h5qa_ 162 LTQVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAHMDKKIRDHQASNIPLN------------RFAQPE 229 (260)
T ss_dssp CSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGSCHHHHHHHHHTCTTS------------SCBCGG
T ss_pred ccccchhhhhhhHHHHHHHHHHHhchhCeEEeecCCCcccCcchhccCHHHHHHHHhcCCCC------------CCcCHH
Confidence 1335799999999999988864 35899999999988654311 112222222211 125589
Q ss_pred HHHHHHHHHccCCC---CCceEEEeCCC
Q 017914 256 DICQVLSASIDKPS---AWNVYNVVDDD 280 (364)
Q Consensus 256 Dva~~~~~~l~~~~---~g~~~~i~~~~ 280 (364)
|+|++++.++.... .|+++.+.+|.
T Consensus 230 dvA~~v~fL~S~~s~~itG~~i~VDGG~ 257 (260)
T d1h5qa_ 230 EMTGQAILLLSDHATYMTGGEYFIDGGQ 257 (260)
T ss_dssp GGHHHHHHHHSGGGTTCCSCEEEECTTG
T ss_pred HHHHHHHHHhcchhCCCcCceEEECCCe
Confidence 99999998886542 48999988774
|
| >d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Bacterial sepiapterin reductase species: Chlorobium tepidum [TaxId: 1097]
Probab=99.56 E-value=7.3e-14 Score=117.46 Aligned_cols=183 Identities=10% Similarity=0.001 Sum_probs=121.7
Q ss_pred eEEEEc-CChhhHHHHHHHHhCCCE-------EEEEEeCchhhhhhh----h--CCceEEEccCChhhH---------Hh
Q 017914 61 RMLILG-MGFVGRIFAEKIKNQGWV-------VSGTCTNVMKKKELE----Q--SGFDVHLFNANETAL---------MI 117 (364)
Q Consensus 61 ~vlVtG-tG~iG~~l~~~L~~~g~~-------V~~~~r~~~~~~~l~----~--~~~~~~~~D~~~~~~---------~~ 117 (364)
.||||| ++.||+++++.|+++|++ |+..+|+.++.+.+. . ..+.++.+|++|.+. +.
T Consensus 3 VvlITGas~GIG~aia~~la~~G~~~~~~~~~v~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~ 82 (240)
T d2bd0a1 3 ILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHIVER 82 (240)
T ss_dssp EEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred EEEEccCCCHHHHHHHHHHHHhCccccccCcEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence 478999 899999999999999986 888999887665442 2 346788999999763 12
Q ss_pred hccCceeeEEEEecCCCCCCCChhh----hHHHHH----------HHHhhcCCccEEEEEccceeecCCCCccccCCCCC
Q 017914 118 LTTLKNYTHLLVSIPPLEGTGDPML----KHGELL----------RSTLMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPA 183 (364)
Q Consensus 118 ~~~~d~v~~~~~~~~~~~~~~~~~~----~~~~~l----------~~a~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~ 183 (364)
+..+|.++|.++......-..-... ....|+ +..+++.+-.++|++||...+...
T Consensus 83 ~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~----------- 151 (240)
T d2bd0a1 83 YGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAATKAF----------- 151 (240)
T ss_dssp TSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC-----------
T ss_pred cCCcceeecccccccCCccccCCHHHHhhcCCEeehHHHHHHHHHhHHHHhcCCCceEEEechhhcCCC-----------
Confidence 2458989888865443221111111 122232 233334455689999987543221
Q ss_pred CCCChhHHHHHHHHHHHHHhhhh---cCCcEEEEEecceecCCCChHHHHHHhcCcccccccccCCcccccccHHHHHHH
Q 017914 184 NPTTELGRLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRSSVDTIIKQLPLSEGQKMRRARQYTSRIHVDDICQV 260 (364)
Q Consensus 184 ~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~ 260 (364)
.....|+.+|...+.+.+.++.+ .|++++.|.||.+-.+.... +.. .....+...+|+|++
T Consensus 152 ~~~~~Y~asK~al~~lt~~la~el~~~gIrvn~i~PG~v~T~~~~~---------~~~-------~~~~~~~~PedvA~~ 215 (240)
T d2bd0a1 152 RHSSIYCMSKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWGK---------VDD-------EMQALMMMPEDIAAP 215 (240)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTTCC---------CCS-------TTGGGSBCHHHHHHH
T ss_pred CCChHHHHHHHHHHHHHHHHHHHhCcCCeEEEEeeeCcccCchhhh---------cCH-------hhHhcCCCHHHHHHH
Confidence 12368999999999998887643 58999999999885542110 000 011223668999999
Q ss_pred HHHHccCCCC
Q 017914 261 LSASIDKPSA 270 (364)
Q Consensus 261 ~~~~l~~~~~ 270 (364)
++.++.++..
T Consensus 216 v~~l~s~~~~ 225 (240)
T d2bd0a1 216 VVQAYLQPSR 225 (240)
T ss_dssp HHHHHTSCTT
T ss_pred HHHHHcCCcc
Confidence 9999987643
|
| >d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein R05D8.7 species: Caenorhabditis elegans [TaxId: 6239]
Probab=99.55 E-value=4.7e-14 Score=121.10 Aligned_cols=208 Identities=10% Similarity=-0.031 Sum_probs=129.3
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhh----h-----CCceEEEccCChhhH---------Hh
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELE----Q-----SGFDVHLFNANETAL---------MI 117 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~----~-----~~~~~~~~D~~~~~~---------~~ 117 (364)
..+|++|||| ++.||+++++.|+++|++|++.+|+.++.+.+. + ..+..+.+|++|++. ..
T Consensus 3 L~gK~alVTGas~GIG~aia~~la~~Ga~V~l~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~~ 82 (272)
T d1xkqa_ 3 FSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLKQ 82 (272)
T ss_dssp TTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCcCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCCceEEEEccCCCHHHHHHHHHHHHHH
Confidence 5678999999 999999999999999999999999987655432 1 246789999999763 12
Q ss_pred hccCceeeEEEEecCCCCCC----CChhh----hHHHHHHH----------HhhcCCccEEEEE-ccceeecCCCCcccc
Q 017914 118 LTTLKNYTHLLVSIPPLEGT----GDPML----KHGELLRS----------TLMNGHLQWLGYL-SSTGVYGHSGGAWVD 178 (364)
Q Consensus 118 ~~~~d~v~~~~~~~~~~~~~----~~~~~----~~~~~l~~----------a~~~~~~~r~v~~-Ss~~vy~~~~~~~~~ 178 (364)
+..+|.++|+++........ +.... ....|+.. .+++.+- ++|.+ ||.+....
T Consensus 83 ~g~iDilvnnAG~~~~~~~~~~~~d~~~~~~~~~~~vNl~~~~~~~~~~~p~m~~~~g-~iI~~~Ss~a~~~~------- 154 (272)
T d1xkqa_ 83 FGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASKG-EIVNVSSIVAGPQA------- 154 (272)
T ss_dssp HSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC-EEEEECCGGGSSSC-------
T ss_pred hCCceEEEeCCcccCcccccccchhccHHHHHHHHHhhhhHHHHHHHhhcccccccCC-ccccccchhccccC-------
Confidence 24689999888765432211 11111 11223222 2223332 45555 44332211
Q ss_pred CCCCCCCCChhHHHHHHHHHHHHHhhhh---cCCcEEEEEecceecCCCC-------hHHHHHHh-cCcccccccccCCc
Q 017914 179 EDYPANPTTELGRLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRS-------SVDTIIKQ-LPLSEGQKMRRARQ 247 (364)
Q Consensus 179 E~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~-------~~~~~~~~-~~~~~~~~~~~~~~ 247 (364)
......|+.+|...+.+.+.++.+ +|+++..|.||.+-.+... ........ .......++
T Consensus 155 ----~~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl----- 225 (272)
T d1xkqa_ 155 ----QPDFLYYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASHKECIPI----- 225 (272)
T ss_dssp ----CCSSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTT-----
T ss_pred ----CCCcchhhhHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcchhhhccCCchHHHHHHHHHHHHHhcCCCC-----
Confidence 112357999999999999888744 5899999999988543210 01111110 000000111
Q ss_pred ccccccHHHHHHHHHHHccCC----CCCceEEEeCCCCC
Q 017914 248 YTSRIHVDDICQVLSASIDKP----SAWNVYNVVDDDPA 282 (364)
Q Consensus 248 ~~~~i~v~Dva~~~~~~l~~~----~~g~~~~i~~~~~~ 282 (364)
.-+...+|+|++++.++..+ -.|+++.+.+|..+
T Consensus 226 -gR~g~pediA~~v~fL~S~~as~~iTG~~i~vDGG~~l 263 (272)
T d1xkqa_ 226 -GAAGKPEHIANIILFLADRNLSFYILGQSIVADGGTSL 263 (272)
T ss_dssp -SSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGGG
T ss_pred -CCCcCHHHHHHHHHHHhCcchhCCccCeEEEeCcCHHH
Confidence 11356899999999888632 35999999887543
|
| >d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=99.55 E-value=2.2e-13 Score=116.93 Aligned_cols=210 Identities=14% Similarity=-0.008 Sum_probs=127.3
Q ss_pred CCCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchh-hhh----hhh--CCceEEEccCChhhH---------Hhh
Q 017914 56 WQSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMK-KKE----LEQ--SGFDVHLFNANETAL---------MIL 118 (364)
Q Consensus 56 ~~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~-~~~----l~~--~~~~~~~~D~~~~~~---------~~~ 118 (364)
...+|++|||| ++.||+++++.|+++|++|++.+|+.++ .+. +.+ ..+.++.+|++|++. +.+
T Consensus 15 sL~gK~~lITGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~ 94 (272)
T d1g0oa_ 15 SLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKIF 94 (272)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHHhhCCceeeEeCCCCCHHHHHHHHHHHHHHh
Confidence 46789999999 9999999999999999999999887543 222 222 357788899999663 222
Q ss_pred ccCceeeEEEEecCCCCCCCChhhhH----HHHHH----------HHhhcCCccEEEEEccceeecCCCCccccCCCCCC
Q 017914 119 TTLKNYTHLLVSIPPLEGTGDPMLKH----GELLR----------STLMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPAN 184 (364)
Q Consensus 119 ~~~d~v~~~~~~~~~~~~~~~~~~~~----~~~l~----------~a~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~ 184 (364)
..+|.++|.++..............+ ..|+. ..+.+. .++++++|.... .. +..
T Consensus 95 g~idilV~nag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~--g~~i~i~s~~~~--~~--------~~~ 162 (272)
T d1g0oa_ 95 GKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIG--GRLILMGSITGQ--AK--------AVP 162 (272)
T ss_dssp SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTT--CEEEEECCGGGT--CS--------SCS
T ss_pred CCCCccccccccchhhhhhhhhhhHHHHHhhhccceeeeeccccccccccc--cccccccccccc--cc--------ccc
Confidence 45788888776544332111111111 11222 222233 367777654311 10 111
Q ss_pred CCChhHHHHHHHHHHHHHhhhh---cCCcEEEEEecceecCCCChHHHHHHhcCcccccc---------cccCCcccccc
Q 017914 185 PTTELGRLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRSSVDTIIKQLPLSEGQK---------MRRARQYTSRI 252 (364)
Q Consensus 185 ~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~i 252 (364)
....|+.+|...+.+.+.++.+ .|++++.|.||.+-.+. ...+........... ........-+.
T Consensus 163 ~~~~Y~asKaal~~ltk~lA~e~~~~gIrVN~I~PG~v~T~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~~ 239 (272)
T d1g0oa_ 163 KHAVYSGSKGAIETFARCMAIDMADKKITVNVVAPGGIKTDM---YHAVCREYIPNGENLSNEEVDEYAAVQWSPLRRVG 239 (272)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHH---HHHHGGGGSTTCTTCCHHHHHHHHHHHSCTTCSCB
T ss_pred chhhHHHHHHHHHHHHHHHHHHhchhCeEEEEEccCCcCChH---HHHHHHhhhhcccccchHHHHHHHHHccCCCCCCc
Confidence 3357999999999999888754 58999999999885421 111111100000000 00000011246
Q ss_pred cHHHHHHHHHHHccCCC---CCceEEEeCCC
Q 017914 253 HVDDICQVLSASIDKPS---AWNVYNVVDDD 280 (364)
Q Consensus 253 ~v~Dva~~~~~~l~~~~---~g~~~~i~~~~ 280 (364)
..+|+|.+++.++.... .|+++.+.+|.
T Consensus 240 ~peevA~~v~fL~s~~s~~itG~~i~vDGG~ 270 (272)
T d1g0oa_ 240 LPIDIARVVCFLASNDGGWVTGKVIGIDGGA 270 (272)
T ss_dssp CHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred CHHHHHHHHHHHhCchhcCccCceEeECCCC
Confidence 78999999999997543 48999988875
|
| >d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,6,8-tetrahydroxynaphthalene reductase species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=99.52 E-value=1.9e-13 Score=116.52 Aligned_cols=200 Identities=14% Similarity=-0.012 Sum_probs=124.7
Q ss_pred CCCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchh-hhh----hhh--CCceEEEccCChhhH--H-------hh
Q 017914 56 WQSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMK-KKE----LEQ--SGFDVHLFNANETAL--M-------IL 118 (364)
Q Consensus 56 ~~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~-~~~----l~~--~~~~~~~~D~~~~~~--~-------~~ 118 (364)
...+|+||||| ++.||.++++.|+++|++|++..|+.++ .+. +.+ .++..+.+|++|.+. . .+
T Consensus 3 ~L~GK~alITGas~GIG~aia~~la~~G~~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~ 82 (259)
T d1ja9a_ 3 PLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSHF 82 (259)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHHcCCCceEecCCCCCHHHHHHHHHHHHHHc
Confidence 35679999998 9999999999999999999987665433 222 222 356789999999663 1 22
Q ss_pred ccCceeeEEEEecCCCCCCCChhh----hHHHHH----------HHHhhcCCccEEEEEccc-eeecCCCCccccCCCCC
Q 017914 119 TTLKNYTHLLVSIPPLEGTGDPML----KHGELL----------RSTLMNGHLQWLGYLSST-GVYGHSGGAWVDEDYPA 183 (364)
Q Consensus 119 ~~~d~v~~~~~~~~~~~~~~~~~~----~~~~~l----------~~a~~~~~~~r~v~~Ss~-~vy~~~~~~~~~E~~~~ 183 (364)
..+|+++|.++............. ....|+ +..+++. .+++.++|. +.+...
T Consensus 83 g~idilinnag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~--g~~iii~s~~~~~~~~----------- 149 (259)
T d1ja9a_ 83 GGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRG--GRIILTSSIAAVMTGI----------- 149 (259)
T ss_dssp SCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEE--EEEEEECCGGGTCCSC-----------
T ss_pred CCCcEEEeccccccccccccchHHHHHHHHhhccceeeeehhhhhhhhhcC--CcccccccccccccCC-----------
Confidence 457888888876433221111111 111222 2222233 356666443 322111
Q ss_pred CCCChhHHHHHHHHHHHHHhhhh---cCCcEEEEEecceecCC-------------CC-h----HHHHHHhcCccccccc
Q 017914 184 NPTTELGRLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPG-------------RS-S----VDTIIKQLPLSEGQKM 242 (364)
Q Consensus 184 ~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~-------------~~-~----~~~~~~~~~~~~~~~~ 242 (364)
.....|+.+|...+.+.+.++.+ .|+++..|.||.+-.+. .. . ...+....+
T Consensus 150 ~~~~~Y~asK~al~~l~r~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p------- 222 (259)
T d1ja9a_ 150 PNHALYAGSKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANMNP------- 222 (259)
T ss_dssp CSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGTSTTCCTTCCHHHHHHHHHHTST-------
T ss_pred CCchhHHHHHHHHHHHHHHHHHHHhhcCeEEeccCcCCccChhhhhhhhhhhhhhcccCCHHHHHHHHHhCCC-------
Confidence 12357999999999999988754 48999999999875321 00 0 011111111
Q ss_pred ccCCcccccccHHHHHHHHHHHccCCC---CCceEEEeCCC
Q 017914 243 RRARQYTSRIHVDDICQVLSASIDKPS---AWNVYNVVDDD 280 (364)
Q Consensus 243 ~~~~~~~~~i~v~Dva~~~~~~l~~~~---~g~~~~i~~~~ 280 (364)
..-+...+|+|++++.++.... .|+.+.+.+|.
T Consensus 223 -----l~R~g~p~eVa~~v~fL~S~~a~~itG~~i~vDGG~ 258 (259)
T d1ja9a_ 223 -----LKRIGYPADIGRAVSALCQEESEWINGQVIKLTGGG 258 (259)
T ss_dssp -----TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred -----CCCCcCHHHHHHHHHHHhCchhcCCcCceEEeCCCC
Confidence 1224678999999999997653 48899887764
|
| >d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.51 E-value=7.5e-14 Score=121.32 Aligned_cols=196 Identities=9% Similarity=-0.037 Sum_probs=125.0
Q ss_pred CCCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhh---------hhhh---hCCceEEEccCChhhH-------
Q 017914 56 WQSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKK---------KELE---QSGFDVHLFNANETAL------- 115 (364)
Q Consensus 56 ~~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~---------~~l~---~~~~~~~~~D~~~~~~------- 115 (364)
...+|++|||| ++.||+++++.|+++|++|++.+|+.+.. +.+. ......+..|+.|.+.
T Consensus 4 ~l~gKvalITGas~GIG~aiA~~la~~Ga~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~ 83 (302)
T d1gz6a_ 4 RFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYDSVEAGEKLVKT 83 (302)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEEEEECCCGGGHHHHHHH
T ss_pred CcCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchhhhhhhhHHHHHHHHHHHhhcccccccccchHHHHHHHHHH
Confidence 35678999999 89999999999999999999998764321 1111 1233455677776432
Q ss_pred --HhhccCceeeEEEEecCCCCCCCCh----hhhHHHHHHHH----------hhcCCccEEEEEccceeecCCCCccccC
Q 017914 116 --MILTTLKNYTHLLVSIPPLEGTGDP----MLKHGELLRST----------LMNGHLQWLGYLSSTGVYGHSGGAWVDE 179 (364)
Q Consensus 116 --~~~~~~d~v~~~~~~~~~~~~~~~~----~~~~~~~l~~a----------~~~~~~~r~v~~Ss~~vy~~~~~~~~~E 179 (364)
+.+..+|+++|.|+......-..-. ......|+... +++.+-.++|++||...+-...
T Consensus 84 ~~~~~G~iDiLVnNAGi~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IV~isS~~~~~~~~------ 157 (302)
T d1gz6a_ 84 ALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGIYGNF------ 157 (302)
T ss_dssp HHHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCT------
T ss_pred HHHHcCCCCEEEECCccCCCCChhhCCHHHHhhhhceeehhhHHHHHHhHHHHHhCCCcEEEEeCChhhcCCCC------
Confidence 2234689999988765433211111 11222333332 3344556999999876432221
Q ss_pred CCCCCCCChhHHHHHHHHHHHHHhhhh---cCCcEEEEEecceecCCCChHHHHHHhcCcccccccccCCcccccccHHH
Q 017914 180 DYPANPTTELGRLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRSSVDTIIKQLPLSEGQKMRRARQYTSRIHVDD 256 (364)
Q Consensus 180 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D 256 (364)
....|+.+|...+.+.+.++.+ +|++++.|.||.+-......+. +....++..+|
T Consensus 158 -----~~~~Y~asKaal~~lt~~la~E~~~~gIrVN~I~PG~~~t~~~~~~~-----------------~~~~~~~~Ped 215 (302)
T d1gz6a_ 158 -----GQANYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAGSRMTETVMP-----------------EDLVEALKPEY 215 (302)
T ss_dssp -----TCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECCSTTTGGGSC-----------------HHHHHHSCGGG
T ss_pred -----CcHHHHHHHHHHHHHHHHHHHHHhccCCceeeeCCCCCCcchhhcCc-----------------HhhHhcCCHHH
Confidence 2357999999999999888644 5899999999876332211110 11122355799
Q ss_pred HHHHHHHHccCC--CCCceEEEeCC
Q 017914 257 ICQVLSASIDKP--SAWNVYNVVDD 279 (364)
Q Consensus 257 va~~~~~~l~~~--~~g~~~~i~~~ 279 (364)
+|.+++.++... -.|+++.+.+|
T Consensus 216 vA~~v~fL~S~~a~itG~~i~vdGG 240 (302)
T d1gz6a_ 216 VAPLVLWLCHESCEENGGLFEVGAG 240 (302)
T ss_dssp THHHHHHHTSTTCCCCSCEEEEETT
T ss_pred HHHHHHHHcCCCcCCCCcEEEeCCC
Confidence 999999888643 23788877665
|
| >d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Erythromycin synthase, eryAI, 1st ketoreductase module species: Saccharopolyspora erythraea [TaxId: 1836]
Probab=99.49 E-value=5.4e-13 Score=113.76 Aligned_cols=191 Identities=13% Similarity=0.064 Sum_probs=121.2
Q ss_pred CCCeEEEEc-CChhhHHHHHHHHhCCC-EEEEEEeCchhhhh-------hhh--CCceEEEccCChhhH--Hhh------
Q 017914 58 SPNRMLILG-MGFVGRIFAEKIKNQGW-VVSGTCTNVMKKKE-------LEQ--SGFDVHLFNANETAL--MIL------ 118 (364)
Q Consensus 58 ~~~~vlVtG-tG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~-------l~~--~~~~~~~~D~~~~~~--~~~------ 118 (364)
...+||||| +|.||+.++++|.++|+ .|+++.|+..+.+. +.. ..+.++.+|++|.+. ..+
T Consensus 8 p~gt~lVTGgs~GIG~a~a~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dv~d~~~~~~~~~~i~~~ 87 (259)
T d2fr1a1 8 PTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGIGDD 87 (259)
T ss_dssp CCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCTT
T ss_pred CcCEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCccCHHHHHHHHHHHHhccccccccccccchHHHHHHhhcccccc
Confidence 346999998 99999999999999998 57888886433221 222 347788999999764 222
Q ss_pred ccCceeeEEEEecCCCCCCCChhh----------hHHHHHHHHhhcCCccEEEEEccceeecCCCCccccCCCCCCCCCh
Q 017914 119 TTLKNYTHLLVSIPPLEGTGDPML----------KHGELLRSTLMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANPTTE 188 (364)
Q Consensus 119 ~~~d~v~~~~~~~~~~~~~~~~~~----------~~~~~l~~a~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~ 188 (364)
..+|.|+|+++............. ....++..++...+..++|++||....-... ....
T Consensus 88 ~~i~~vv~~ag~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~~~~~~~~iv~~SS~a~~~g~~-----------~~~~ 156 (259)
T d2fr1a1 88 VPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTRELDLTAFVLFSSFASAFGAP-----------GLGG 156 (259)
T ss_dssp SCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTSCCSEEEEEEEHHHHTCCT-----------TCTT
T ss_pred ccccccccccccccccccccccHHHHHHHhhhhccchhHHHHHhhccCCceEeeecchhhccCCc-----------ccHH
Confidence 236778887765443321111111 1123455555566677999998876432211 2357
Q ss_pred hHHHHHHHHHHHHHhhhhcCCcEEEEEecceecCCCChHHHHHHhcCcccccccccCCcccccccHHHHHHHHHHHccCC
Q 017914 189 LGRLRLSAEKGWLNLGRDLGISAQVFRLGGIYGPGRSSVDTIIKQLPLSEGQKMRRARQYTSRIHVDDICQVLSASIDKP 268 (364)
Q Consensus 189 Y~~sK~~~E~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~ 268 (364)
|+.+|...+.+.+++. ..|++++.|.||.+.+.+- ....... .+.. .| ...+..+++++++..++.++
T Consensus 157 YaAaka~l~~la~~~~-~~Gi~v~~I~pg~~~~~g~--~~~~~~~-~~~~-----~G---~~~~~~~~~~~~l~~~l~~~ 224 (259)
T d2fr1a1 157 YAPGNAYLDGLAQQRR-SDGLPATAVAWGTWAGSGM--AEGPVAD-RFRR-----HG---VIEMPPETACRALQNALDRA 224 (259)
T ss_dssp THHHHHHHHHHHHHHH-HTTCCCEEEEECCBC---------------CTT-----TT---EECBCHHHHHHHHHHHHHTT
T ss_pred HHHHHHhHHHHHHHHH-hCCCCEEECCCCcccCCcc--ccchHHH-HHHh-----cC---CCCCCHHHHHHHHHHHHhCC
Confidence 9999999999987765 4599999999998765431 1100000 0110 11 23378999999999999887
Q ss_pred CCC
Q 017914 269 SAW 271 (364)
Q Consensus 269 ~~g 271 (364)
...
T Consensus 225 ~~~ 227 (259)
T d2fr1a1 225 EVC 227 (259)
T ss_dssp CSS
T ss_pred Cce
Confidence 654
|
| >d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Type II 3-hydroxyacyl-CoA dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.48 E-value=1.5e-12 Score=110.09 Aligned_cols=198 Identities=12% Similarity=0.015 Sum_probs=122.7
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhh---CCceEEEccCChhhH---------HhhccCce
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQ---SGFDVHLFNANETAL---------MILTTLKN 123 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~---~~~~~~~~D~~~~~~---------~~~~~~d~ 123 (364)
..+|.+|||| ++.||++++++|+++|++|++.+|+.+..+.+.+ ........|+.+.+. ......|.
T Consensus 3 lkGKvalITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (248)
T d2o23a1 3 VKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNNCVFAPADVTSEKDVQTALALAKGKFGRVDV 82 (248)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCCcccccccccccccccccccccccccccccc
Confidence 4678999999 8999999999999999999999998876654432 456677788877432 11234566
Q ss_pred eeEEEEecCCCCC-----CC-Chhh----hHHHHHH------HHh----h------cCCccEEEEEccceeecCCCCccc
Q 017914 124 YTHLLVSIPPLEG-----TG-DPML----KHGELLR------STL----M------NGHLQWLGYLSSTGVYGHSGGAWV 177 (364)
Q Consensus 124 v~~~~~~~~~~~~-----~~-~~~~----~~~~~l~------~a~----~------~~~~~r~v~~Ss~~vy~~~~~~~~ 177 (364)
+++.+........ .. .... ....|+. .++ . ..+..++|++||...+....
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~~~~---- 158 (248)
T d2o23a1 83 AVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQV---- 158 (248)
T ss_dssp EEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCCT----
T ss_pred cccccccccCCCcccccccccchHHHHHHHHhHHHHHHHHHHHHhHHHHHHhhhhccCCceEEEEecchhhccCCC----
Confidence 6665543222111 00 0111 1122222 121 1 12345899999976542221
Q ss_pred cCCCCCCCCChhHHHHHHHHHHHHHhhhh---cCCcEEEEEecceecCCCCh-----HHHHHHhcCcccccccccCCccc
Q 017914 178 DEDYPANPTTELGRLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRSS-----VDTIIKQLPLSEGQKMRRARQYT 249 (364)
Q Consensus 178 ~E~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~ 249 (364)
....|+.+|...+.+.+.++.+ .|+++..|.||.+..+.... ...+....++. .
T Consensus 159 -------~~~~Y~asKaal~~lt~~la~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~pl~-----------~ 220 (248)
T d2o23a1 159 -------GQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLTSLPEKVCNFLASQVPFP-----------S 220 (248)
T ss_dssp -------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC----------CHHHHTCSSS-----------C
T ss_pred -------CchHHHHHHHHHHHHHHHHHHHhcccCcceeeeccCceecchhhcCCHHHHHHHHhcCCCC-----------C
Confidence 2367999999999999998754 47999999999886543211 11111111110 1
Q ss_pred ccccHHHHHHHHHHHccCC-CCCceEEE
Q 017914 250 SRIHVDDICQVLSASIDKP-SAWNVYNV 276 (364)
Q Consensus 250 ~~i~v~Dva~~~~~~l~~~-~~g~~~~i 276 (364)
-+...+|+|++++.+++.+ -.|++.++
T Consensus 221 R~g~peevA~~v~fL~s~~~itGq~I~v 248 (248)
T d2o23a1 221 RLGDPAEYAHLVQAIIENPFLNGEVIRL 248 (248)
T ss_dssp SCBCHHHHHHHHHHHHHCTTCCSCEEEE
T ss_pred CCcCHHHHHHHHHHHHhCCCCCceEeEC
Confidence 1356899999999888754 23777664
|
| >d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Escherichia coli [TaxId: 562]
Probab=99.45 E-value=9.8e-13 Score=112.04 Aligned_cols=201 Identities=16% Similarity=0.078 Sum_probs=124.2
Q ss_pred CCCCeEEEEc-CC--hhhHHHHHHHHhCCCEEEEEEeCchhhhhhh-----hCCceEEEccCChhhH------Hhh---c
Q 017914 57 QSPNRMLILG-MG--FVGRIFAEKIKNQGWVVSGTCTNVMKKKELE-----QSGFDVHLFNANETAL------MIL---T 119 (364)
Q Consensus 57 ~~~~~vlVtG-tG--~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~-----~~~~~~~~~D~~~~~~------~~~---~ 119 (364)
..+|+||||| +| .||+++++.|+++|++|++.+|+.+....+. ......+..|+.+... ... .
T Consensus 3 L~gK~~lITGass~~GIG~aiA~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (258)
T d1qsga_ 3 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVWP 82 (258)
T ss_dssp TTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTTCS
T ss_pred CCCCEEEEECCCCchhHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHhhcCCcceeecccchHHHHHHHHHHhhhccc
Confidence 4679999998 77 6999999999999999999999865433322 1356777888877543 112 3
Q ss_pred cCceeeEEEEecCCCCCCCChhh-----hHH----------HHHHHHhh--cCCccEEEEEccceeecCCCCccccCCCC
Q 017914 120 TLKNYTHLLVSIPPLEGTGDPML-----KHG----------ELLRSTLM--NGHLQWLGYLSSTGVYGHSGGAWVDEDYP 182 (364)
Q Consensus 120 ~~d~v~~~~~~~~~~~~~~~~~~-----~~~----------~~l~~a~~--~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~ 182 (364)
..|.++|.++............. ... ..+..++. ..+-+.+|++||.+....
T Consensus 83 ~~d~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ii~iss~~~~~~----------- 151 (258)
T d1qsga_ 83 KFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERA----------- 151 (258)
T ss_dssp SEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSB-----------
T ss_pred ccceEEEeecccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhccCCcEEEEecchhhccC-----------
Confidence 35666666644322111110000 000 11111111 122346888887653211
Q ss_pred CCCCChhHHHHHHHHHHHHHhhhh---cCCcEEEEEecceecCCCCh-------HHHHHHhcCcccccccccCCcccccc
Q 017914 183 ANPTTELGRLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRSS-------VDTIIKQLPLSEGQKMRRARQYTSRI 252 (364)
Q Consensus 183 ~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~i 252 (364)
......|+.+|.+.+.+.+.++.+ +|+++..|.||.+..+.... ...+....+++ -+.
T Consensus 152 ~~~~~~Y~~sKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~pl~------------R~~ 219 (258)
T d1qsga_ 152 IPNYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPIR------------RTV 219 (258)
T ss_dssp CTTTTHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHSTTS------------SCC
T ss_pred CCCcHHHHHHHHHHHHHHHHHHHHhCccCceeecccccccccccccccchhhhHHHHHHhCCCCC------------CCc
Confidence 112357999999999999988754 47999999999997654221 11111112111 135
Q ss_pred cHHHHHHHHHHHccCC---CCCceEEEeCCC
Q 017914 253 HVDDICQVLSASIDKP---SAWNVYNVVDDD 280 (364)
Q Consensus 253 ~v~Dva~~~~~~l~~~---~~g~~~~i~~~~ 280 (364)
..+|+|+++..++... -.|+++.+.+|.
T Consensus 220 ~peeia~~v~fL~s~~s~~itG~~i~vDGG~ 250 (258)
T d1qsga_ 220 TIEDVGNSAAFLCSDLSAGISGEVVHVDGGF 250 (258)
T ss_dssp CHHHHHHHHHHHTSGGGTTCCSCEEEESTTG
T ss_pred CHHHHHHHHHHHhCchhcCccCceEEECcCH
Confidence 6899999999999754 238899988774
|
| >d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.44 E-value=1.3e-12 Score=109.55 Aligned_cols=188 Identities=11% Similarity=0.102 Sum_probs=118.4
Q ss_pred CCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCChhhH---------Hhh--ccCceeeE
Q 017914 59 PNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETAL---------MIL--TTLKNYTH 126 (364)
Q Consensus 59 ~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~---------~~~--~~~d~v~~ 126 (364)
+|+||||| +|.||+++++.|+++|++|++++++..... .....+..|..+.+. ..+ ..+|.++|
T Consensus 2 gK~vlITGas~GIG~a~a~~l~~~G~~V~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iD~lIn 77 (236)
T d1dhra_ 2 ARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEA----SASVIVKMTDSFTEQADQVTAEVGKLLGDQKVDAILC 77 (236)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTS----SEEEECCCCSCHHHHHHHHHHHHHHHHTTCCEEEEEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCccccc----cccceeecccCcHHHHHHHHHHHHHHhCCCCceEEEE
Confidence 68999999 999999999999999999999998755432 222344455544321 111 24788888
Q ss_pred EEEecCCCCCC-CChhh----hHHHHHHHHhh--------cCCccEEEEEccceeecCCCCccccCCCCCCCCChhHHHH
Q 017914 127 LLVSIPPLEGT-GDPML----KHGELLRSTLM--------NGHLQWLGYLSSTGVYGHSGGAWVDEDYPANPTTELGRLR 193 (364)
Q Consensus 127 ~~~~~~~~~~~-~~~~~----~~~~~l~~a~~--------~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~~sK 193 (364)
+++........ ..... ....|+..... ..+-.++|++||...+.... ....|+.+|
T Consensus 78 nAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~G~Iv~isS~~~~~~~~-----------~~~~Y~asK 146 (236)
T d1dhra_ 78 VAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAALDGTP-----------GMIGYGMAK 146 (236)
T ss_dssp CCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCT-----------TBHHHHHHH
T ss_pred CCcccccccchhcCCHHHHHHHHHHcchHHHHHHHHHHHhcccccceeEEccHHHcCCcc-----------CCcccHHHH
Confidence 88753332211 11111 12233322211 11235899999876442221 235899999
Q ss_pred HHHHHHHHHhhhh-----cCCcEEEEEecceecCCCChHHHHHHhcCcccccccccCCcccccccHHHHHHHHHHHccCC
Q 017914 194 LSAEKGWLNLGRD-----LGISAQVFRLGGIYGPGRSSVDTIIKQLPLSEGQKMRRARQYTSRIHVDDICQVLSASIDKP 268 (364)
Q Consensus 194 ~~~E~~~~~~~~~-----~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~ 268 (364)
.+.+.+.+.++.+ .|++++.|.||.+..+ +.+ ... +. ...-.++..+|+|+.+..++...
T Consensus 147 aal~~lt~~la~El~~~~~gI~vn~v~PG~v~T~----~~~--~~~--~~-------~~~~~~~~pe~va~~~~~l~s~~ 211 (236)
T d1dhra_ 147 GAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTP----MNR--KSM--PE-------ADFSSWTPLEFLVETFHDWITGN 211 (236)
T ss_dssp HHHHHHHHHHTSTTSSCCTTCEEEEEEESCEECH----HHH--HHS--TT-------SCGGGSEEHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHHhccCCCcEEEEEEEeccCcCC----cch--hhC--cc-------chhhcCCCHHHHHHHHHHHhCCC
Confidence 9999999998754 4799999999998643 111 111 00 11223577999999999988765
Q ss_pred C---CCceEEE
Q 017914 269 S---AWNVYNV 276 (364)
Q Consensus 269 ~---~g~~~~i 276 (364)
. .|+.+.+
T Consensus 212 ~~~i~G~~i~v 222 (236)
T d1dhra_ 212 KRPNSGSLIQV 222 (236)
T ss_dssp TCCCTTCEEEE
T ss_pred ccCCCCCeEEE
Confidence 3 3666665
|
| >d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sepiapterin reductase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.43 E-value=7.4e-13 Score=112.78 Aligned_cols=206 Identities=10% Similarity=-0.015 Sum_probs=123.1
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHh---CCCEEEEEEeCchhhhhhhh--------CCceEEEccCChhhH--Hhh----
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKN---QGWVVSGTCTNVMKKKELEQ--------SGFDVHLFNANETAL--MIL---- 118 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~---~g~~V~~~~r~~~~~~~l~~--------~~~~~~~~D~~~~~~--~~~---- 118 (364)
..+|.++||| ++.||++++++|.+ +|++|++.+|+.++.+.+.+ .++..+.+|+++.+. ..+
T Consensus 4 L~gKvalITGas~GIG~aiA~~lA~~~~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~l~~~~~ 83 (259)
T d1oaaa_ 4 LGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAVR 83 (259)
T ss_dssp CBSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHhcccCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHH
Confidence 4567889999 89999999999986 79999999999877655422 246788999999764 221
Q ss_pred c-------cCceeeEEEEecCCCCC--CCC-----hhhhHHHHHHHHh----------hcCC--ccEEEEEccceeecCC
Q 017914 119 T-------TLKNYTHLLVSIPPLEG--TGD-----PMLKHGELLRSTL----------MNGH--LQWLGYLSSTGVYGHS 172 (364)
Q Consensus 119 ~-------~~d~v~~~~~~~~~~~~--~~~-----~~~~~~~~l~~a~----------~~~~--~~r~v~~Ss~~vy~~~ 172 (364)
+ ..|.+++.++....... ..+ .......|+.... ++.+ ..++|++||...+..
T Consensus 84 ~~~~~~~~~~~~lvnnag~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~~~~~g~Iv~isS~~~~~~- 162 (259)
T d1oaaa_ 84 ELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQP- 162 (259)
T ss_dssp HSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGTSC-
T ss_pred HhhhhccCceEEEEecccccccCCCCccccCCHHHHHHHHHHhhhhhHHHHHHHHHHHHhcCCCcccccccccccccCC-
Confidence 1 23455555554332211 111 1111223333222 2332 458999998654321
Q ss_pred CCccccCCCCCCCCChhHHHHHHHHHHHHHhhhh-cCCcEEEEEecceecCCCChHHHHHHhcCcccc-cccccCCcccc
Q 017914 173 GGAWVDEDYPANPTTELGRLRLSAEKGWLNLGRD-LGISAQVFRLGGIYGPGRSSVDTIIKQLPLSEG-QKMRRARQYTS 250 (364)
Q Consensus 173 ~~~~~~E~~~~~~~~~Y~~sK~~~E~~~~~~~~~-~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 250 (364)
......|+.+|...+.+.+.++.+ .|+++..|.||.+..+. ............. ..+.......-
T Consensus 163 ----------~~~~~~Y~asKaal~~lt~~la~e~~gIrVn~v~PG~i~T~~---~~~~~~~~~~~~~~~~~~~~~~~~r 229 (259)
T d1oaaa_ 163 ----------YKGWGLYCAGKAARDMLYQVLAAEEPSVRVLSYAPGPLDNDM---QQLARETSKDPELRSKLQKLKSDGA 229 (259)
T ss_dssp ----------CTTCHHHHHHHHHHHHHHHHHHHHCTTEEEEEEECCSBSSHH---HHHHHHHCSCHHHHHHHHHHHHTTC
T ss_pred ----------CccchHHHHHHHHHHHHHHHHHhCCCCCEEEEEEcCCCCCHH---HHHhhhcCCCHHHHHHHHhcCCCCC
Confidence 113468999999999999988744 48999999999886542 1111111000000 00000000012
Q ss_pred cccHHHHHHHHHHHccCC--CCCceEEE
Q 017914 251 RIHVDDICQVLSASIDKP--SAWNVYNV 276 (364)
Q Consensus 251 ~i~v~Dva~~~~~~l~~~--~~g~~~~i 276 (364)
+...+|+|++++.+++.. ..|+.+++
T Consensus 230 ~~~p~evA~~i~~ll~~~s~~TG~~idv 257 (259)
T d1oaaa_ 230 LVDCGTSAQKLLGLLQKDTFQSGAHVDF 257 (259)
T ss_dssp SBCHHHHHHHHHHHHHHCCSCTTEEEET
T ss_pred CCCHHHHHHHHHHHhhhccCCCCCeEEe
Confidence 366899999999988754 23766664
|
| >d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Helicobacter pylori [TaxId: 210]
Probab=99.43 E-value=2.8e-12 Score=110.12 Aligned_cols=205 Identities=17% Similarity=0.050 Sum_probs=122.5
Q ss_pred CCCCeEEEEc-CC--hhhHHHHHHHHhCCCEEEEEEeCchhhhhhh-----hCCceEEEccCChhhH--H-------hhc
Q 017914 57 QSPNRMLILG-MG--FVGRIFAEKIKNQGWVVSGTCTNVMKKKELE-----QSGFDVHLFNANETAL--M-------ILT 119 (364)
Q Consensus 57 ~~~~~vlVtG-tG--~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~-----~~~~~~~~~D~~~~~~--~-------~~~ 119 (364)
..+|++|||| +| .||.+++++|+++|++|++.+|+....+.+. .....++..|+++.+. . .+.
T Consensus 3 L~gK~alITGaag~~GIG~AiA~~la~~Ga~V~i~~r~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~g 82 (274)
T d2pd4a1 3 LKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKDLG 82 (274)
T ss_dssp TTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHTS
T ss_pred CCCCEEEEECCCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhCCceeEeeecccchhhHHHHHHHHHHHcC
Confidence 4579999998 66 6999999999999999999999854322221 1456778899988553 1 123
Q ss_pred cCceeeEEEEecCCCCCCCCh----hhhHHH----------HHHHH-hhcCCccE-EEEEccceeecCCCCccccCCCCC
Q 017914 120 TLKNYTHLLVSIPPLEGTGDP----MLKHGE----------LLRST-LMNGHLQW-LGYLSSTGVYGHSGGAWVDEDYPA 183 (364)
Q Consensus 120 ~~d~v~~~~~~~~~~~~~~~~----~~~~~~----------~l~~a-~~~~~~~r-~v~~Ss~~vy~~~~~~~~~E~~~~ 183 (364)
.+|.+++.++........... ...... ..... ....+..+ ++.+|+.+.... .
T Consensus 83 ~id~lV~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~~~~~~~-----------~ 151 (274)
T d2pd4a1 83 SLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNGASVLTLSYLGSTKY-----------M 151 (274)
T ss_dssp CEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSB-----------C
T ss_pred CCCeEEeecccccccccccccccccchhhhhhhccccccccccccccccccccCcceeeecccccccc-----------c
Confidence 456666666543322111111 111111 11111 11222223 444455443221 1
Q ss_pred CCCChhHHHHHHHHHHHHHhhhh---cCCcEEEEEecceecCCCChH---HHHHHhcCcccccccccCCcccccccHHHH
Q 017914 184 NPTTELGRLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRSSV---DTIIKQLPLSEGQKMRRARQYTSRIHVDDI 257 (364)
Q Consensus 184 ~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dv 257 (364)
.....|+.+|...+.+.+..+.+ .|+++..|.||.+..+..... ......... .. ...-+...+|+
T Consensus 152 ~~~~~y~asK~al~~ltr~lA~e~~~~GIrvN~I~PG~v~T~~~~~~~~~~~~~~~~~~--~~------p~~r~~~pedI 223 (274)
T d2pd4a1 152 AHYNVMGLAKAALESAVRYLAVDLGKHHIRVNALSAGPIRTLASSGIADFRMILKWNEI--NA------PLRKNVSLEEV 223 (274)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGGSTTHHHHHHHHHH--HS------TTSSCCCHHHH
T ss_pred ccchhhhHHHHHHHHHHHhhHHHhcCcCceecccccCcccCccccccCchHHHHHHHhh--hh------hccCCcCHHHH
Confidence 23357999999999999887643 479999999998876542211 111111000 00 01123678999
Q ss_pred HHHHHHHccCCC---CCceEEEeCCC
Q 017914 258 CQVLSASIDKPS---AWNVYNVVDDD 280 (364)
Q Consensus 258 a~~~~~~l~~~~---~g~~~~i~~~~ 280 (364)
|.+++.++.... .|+++.+.+|.
T Consensus 224 A~~v~fL~S~~s~~itG~~i~vDGG~ 249 (274)
T d2pd4a1 224 GNAGMYLLSSLSSGVSGEVHFVDAGY 249 (274)
T ss_dssp HHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred HHHHHHHhChhhCCCcCceEEECCCh
Confidence 999999987543 48999998875
|
| >d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative carbonyl reductase sniffer species: Caenorhabditis elegans [TaxId: 6239]
Probab=99.42 E-value=4.3e-12 Score=107.35 Aligned_cols=199 Identities=13% Similarity=0.007 Sum_probs=121.2
Q ss_pred CCCeEEEEc-CChhhHHHHHHHHhCCC--EEEEEEeCchhhhhhhh---CCceEEEccCChhhH-----Hh----hc--c
Q 017914 58 SPNRMLILG-MGFVGRIFAEKIKNQGW--VVSGTCTNVMKKKELEQ---SGFDVHLFNANETAL-----MI----LT--T 120 (364)
Q Consensus 58 ~~~~vlVtG-tG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~l~~---~~~~~~~~D~~~~~~-----~~----~~--~ 120 (364)
.+++||||| ++.||.+++++|+++|+ .|++..|+.++.+.+.+ .++.++.+|++|.+. .. +. .
T Consensus 2 ~~KtilITGassGIG~a~a~~la~~G~~~~Vi~~~R~~~~~~~l~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~~~ 81 (250)
T d1yo6a1 2 SPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSRVHVLPLTVTCDKSLDTFVSKVGEIVGSDG 81 (250)
T ss_dssp CCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHTCCCTTEEEEECCTTCHHHHHHHHHHHHHHHGGGC
T ss_pred cCCEEEEeCCCCHHHHHHHHHHHHCCCCCEEEEEeCCHHHHHHHHHhhCCceEEEEEecCCHHHHHHHHHHHHHHhCCCC
Confidence 348999999 99999999999999995 78888999887766543 468899999999653 11 11 3
Q ss_pred CceeeEEEEecCCCCCCCC-----hhhhHHHHHHHHh----------hc-----------CCccEEEEEccceeecCCCC
Q 017914 121 LKNYTHLLVSIPPLEGTGD-----PMLKHGELLRSTL----------MN-----------GHLQWLGYLSSTGVYGHSGG 174 (364)
Q Consensus 121 ~d~v~~~~~~~~~~~~~~~-----~~~~~~~~l~~a~----------~~-----------~~~~r~v~~Ss~~vy~~~~~ 174 (364)
+|.++++|+.........+ .......|+.... ++ ....+++.+|+...+-....
T Consensus 82 idilinnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~l~~~~~~~~~~~~~~~~~~~i~~s~~~~~~~~~~ 161 (250)
T d1yo6a1 82 LSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITDNT 161 (250)
T ss_dssp CCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGGCSTTCC
T ss_pred eEEEEEcCcccCCCCccccCCHHHHHHHHHHHhhhHHHHHHHHHHHHHHhccCCCCccccceeccccccccccccccCCc
Confidence 7888888876543222111 1112223333322 11 11235677766433211110
Q ss_pred ccccCCCCCCCCChhHHHHHHHHHHHHHhhh---hcCCcEEEEEecceecCCCChHHHHHHhcCcccccccccCCccccc
Q 017914 175 AWVDEDYPANPTTELGRLRLSAEKGWLNLGR---DLGISAQVFRLGGIYGPGRSSVDTIIKQLPLSEGQKMRRARQYTSR 251 (364)
Q Consensus 175 ~~~~E~~~~~~~~~Y~~sK~~~E~~~~~~~~---~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (364)
...+..+...|+.||.+...+.+.++. ..|++++.+.||.+-.+-. .. ...
T Consensus 162 ----~~~~~~~~~aY~aSKaal~~l~~~la~el~~~gI~v~~i~PG~v~T~m~-------~~---------------~~~ 215 (250)
T d1yo6a1 162 ----SGSAQFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNLG-------GK---------------NAA 215 (250)
T ss_dssp ----STTSSSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC--------------------------------
T ss_pred ----ccccchhHHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCCCCCC-------CC---------------CCC
Confidence 011222445799999999999888874 4489999999998743210 00 011
Q ss_pred ccHHHHHHHHHHHccCCC---CCceEEEeCCCCCC
Q 017914 252 IHVDDICQVLSASIDKPS---AWNVYNVVDDDPAP 283 (364)
Q Consensus 252 i~v~Dva~~~~~~l~~~~---~g~~~~i~~~~~~s 283 (364)
+..++.++.++..+.+.. .|+.|+. +++++.
T Consensus 216 ~~~e~~a~~~~~~~~~~~~~~sG~f~~~-~g~p~~ 249 (250)
T d1yo6a1 216 LTVEQSTAELISSFNKLDNSHNGRFFMR-NLKPYE 249 (250)
T ss_dssp ---HHHHHHHHHHHTTCCGGGTTCEEET-TEEECC
T ss_pred CCHHHHHHHHHHHHhcCCCCCCeEEECC-CCeeCC
Confidence 557888998888887653 3665553 445544
|
| >d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.41 E-value=1.6e-12 Score=112.12 Aligned_cols=201 Identities=7% Similarity=-0.039 Sum_probs=116.8
Q ss_pred CeEEEEc-CChhhHHHHHHHHhCCCEEEEEE---eCchhhhhhh---------hCCceEEEccCChhhH--Hhh-----c
Q 017914 60 NRMLILG-MGFVGRIFAEKIKNQGWVVSGTC---TNVMKKKELE---------QSGFDVHLFNANETAL--MIL-----T 119 (364)
Q Consensus 60 ~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~---r~~~~~~~l~---------~~~~~~~~~D~~~~~~--~~~-----~ 119 (364)
|.||||| ++.||+++++.|+++|.+|+.+. |+.+....+. ..++..+.+|++|.+. ..+ .
T Consensus 3 kVvlITGassGIG~a~A~~la~~Ga~v~~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~g 82 (285)
T d1jtva_ 3 TVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVTEG 82 (285)
T ss_dssp EEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCTTS
T ss_pred CEEEEccCCCHHHHHHHHHHHHCCCCeEEEEEecCChhhhHHHHHHHHHHhccCCceEEEeccccchHhhhhhhhhcccc
Confidence 4567889 99999999999999998765554 4433332221 1357889999999774 222 3
Q ss_pred cCceeeEEEEecCCCCCCCChhh----hHHHHH----------HHHhhcCCccEEEEEccceeecCCCCccccCCCCCCC
Q 017914 120 TLKNYTHLLVSIPPLEGTGDPML----KHGELL----------RSTLMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANP 185 (364)
Q Consensus 120 ~~d~v~~~~~~~~~~~~~~~~~~----~~~~~l----------~~a~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~ 185 (364)
.+|.+++.++............. ....|+ +..+++.+-.++|++||....-. ...
T Consensus 83 ~idilvnnag~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~m~~~~~G~Iv~isS~~g~~~-----------~~~ 151 (285)
T d1jtva_ 83 RVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMG-----------LPF 151 (285)
T ss_dssp CCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTSC-----------CTT
T ss_pred chhhhhhcccccccccccchhHhhhhhhhhcchhHHHHHHHHHHHHHHHcCCCceEEEechhhcCC-----------CCC
Confidence 46777777765443321111111 112232 22334555679999998753311 112
Q ss_pred CChhHHHHHHHHHHHHHhhhh---cCCcEEEEEecceecCCC-Ch---HHHHHHhcCcccc----ccccc--CCcccccc
Q 017914 186 TTELGRLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGR-SS---VDTIIKQLPLSEG----QKMRR--ARQYTSRI 252 (364)
Q Consensus 186 ~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~-~~---~~~~~~~~~~~~~----~~~~~--~~~~~~~i 252 (364)
...|+.+|.+.+.+.+.++.+ .|++++.|.||.+-.+-. .. ............. ..... ........
T Consensus 152 ~~~Y~asKaal~~l~~~la~El~~~gIrVn~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (285)
T d1jtva_ 152 NDVYCASKFALEGLCESLAVLLLPFGVHLSLIECGPVHTAFMEKVLGSPEEVLDRTDIHTFHRFYQYLAHSKQVFREAAQ 231 (285)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC-------CCHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHCB
T ss_pred chHHHHHHHHHHHHHHHHHHHhhccCcEEEEEecCCCCChHHHHhccCHHHHhhccchhHHHHHHHHHHHHhhhhcccCC
Confidence 357999999999999888654 589999999998854321 00 0111110000000 00000 00001135
Q ss_pred cHHHHHHHHHHHccCCCCC
Q 017914 253 HVDDICQVLSASIDKPSAW 271 (364)
Q Consensus 253 ~v~Dva~~~~~~l~~~~~g 271 (364)
..+|+|++++.+++.+.+.
T Consensus 232 ~PeeVA~~v~~~~~~~~p~ 250 (285)
T d1jtva_ 232 NPEEVAEVFLTALRAPKPT 250 (285)
T ss_dssp CHHHHHHHHHHHHHCSSCC
T ss_pred CHHHHHHHHHHHHhCCCCC
Confidence 6899999999999887654
|
| >d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Type II 3-hydroxyacyl-CoA dehydrogenase species: Thermus thermophilus [TaxId: 274]
Probab=99.40 E-value=5.4e-12 Score=106.18 Aligned_cols=196 Identities=11% Similarity=-0.042 Sum_probs=118.5
Q ss_pred CeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCChhhH--Hhh------ccCceeeEEEEe
Q 017914 60 NRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETAL--MIL------TTLKNYTHLLVS 130 (364)
Q Consensus 60 ~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~--~~~------~~~d~v~~~~~~ 130 (364)
|++|||| ++.||+++++.|+++|++|++.+|+.+. .....+.+|+.+... ... ...+.+++.++.
T Consensus 2 K~alITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~------~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 75 (241)
T d1uaya_ 2 RSALVTGGASGLGRAAALALKARGYRVVVLDLRREG------EDLIYVEGDVTREEDVRRAVARAQEEAPLFAVVSAAGV 75 (241)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCCS------SSSEEEECCTTCHHHHHHHHHHHHHHSCEEEEEECCCC
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCccc------ccceEeeccccchhhhHHHHHhhhccccccchhhhhhc
Confidence 7899999 8999999999999999999999998654 345677889987543 111 122222222221
Q ss_pred cCCCCC---CC-Chhh----hHHHHH----------HHH------hhcCCccEEEEEccceeecCCCCccccCCCCCCCC
Q 017914 131 IPPLEG---TG-DPML----KHGELL----------RST------LMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANPT 186 (364)
Q Consensus 131 ~~~~~~---~~-~~~~----~~~~~l----------~~a------~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~ 186 (364)
...... .. .... ....|+ ... ....+..++|++||...+.... ..
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~~~~-----------~~ 144 (241)
T d1uaya_ 76 GLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQI-----------GQ 144 (241)
T ss_dssp CCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHCCT-----------TC
T ss_pred cccccccccccchhHHHHHHHHHHHhhhhHHHHHHHHHHhhhhhhhcccCceeeeeecchhhccCCC-----------Cc
Confidence 111110 00 0000 111111 111 1123456899999976442222 23
Q ss_pred ChhHHHHHHHHHHHHHhhhh---cCCcEEEEEecceecCCC-ChHHHHHHh--cCcccccccccCCcccccccHHHHHHH
Q 017914 187 TELGRLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGR-SSVDTIIKQ--LPLSEGQKMRRARQYTSRIHVDDICQV 260 (364)
Q Consensus 187 ~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~-~~~~~~~~~--~~~~~~~~~~~~~~~~~~i~v~Dva~~ 260 (364)
..|+.+|...+.+.+.++.+ +|+++..|.||.+..+.. ......... ...+.. .-+...+|+|++
T Consensus 145 ~~Y~asKaal~~lt~~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~---------~R~g~pedvA~~ 215 (241)
T d1uaya_ 145 AAYAASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQGLPEKAKASLAAQVPFP---------PRLGRPEEYAAL 215 (241)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHHHHTSCHHHHHHHHTTCCSS---------CSCCCHHHHHHH
T ss_pred hhhHHHHHHHHHHHHHHHHHHhhcCCceeeecCCcccccccchhhhhHHHHHHhcCCCC---------CCCcCHHHHHHH
Confidence 58999999999999988754 589999999998854321 111111110 111100 112568999999
Q ss_pred HHHHccCC-CCCceEEEeCCCC
Q 017914 261 LSASIDKP-SAWNVYNVVDDDP 281 (364)
Q Consensus 261 ~~~~l~~~-~~g~~~~i~~~~~ 281 (364)
++.+++.. -.|+++.+.+|-.
T Consensus 216 v~fL~s~~~iTG~~i~VDGG~~ 237 (241)
T d1uaya_ 216 VLHILENPMLNGEVVRLDGALR 237 (241)
T ss_dssp HHHHHHCTTCCSCEEEESTTCC
T ss_pred HHHHHhCCCCCCCEEEECCccc
Confidence 99888754 2489999987743
|
| >d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=99.39 E-value=2.5e-12 Score=107.82 Aligned_cols=188 Identities=11% Similarity=0.015 Sum_probs=116.8
Q ss_pred CeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCChhhH---------Hh--hccCceeeEE
Q 017914 60 NRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETAL---------MI--LTTLKNYTHL 127 (364)
Q Consensus 60 ~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~---------~~--~~~~d~v~~~ 127 (364)
.|||||| +|.||++++++|+++|++|++++|+..+.. .....+.+|..+.+. .. ...+|.++|+
T Consensus 3 gkVlITGas~GIG~aia~~l~~~G~~V~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iD~linn 78 (235)
T d1ooea_ 3 GKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQA----DSNILVDGNKNWTEQEQSILEQTASSLQGSQVDGVFCV 78 (235)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTS----SEEEECCTTSCHHHHHHHHHHHHHHHHTTCCEEEEEEC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCchhcc----cccceeccccCchhHHHHHHHHHHHHhcCCCeeEEEEC
Confidence 5899999 999999999999999999999999865432 223344566665332 11 1347888888
Q ss_pred EEecCCCCC-CCChhh----hHHHHHHHHhh--------cCCccEEEEEccceeecCCCCccccCCCCCCCCChhHHHHH
Q 017914 128 LVSIPPLEG-TGDPML----KHGELLRSTLM--------NGHLQWLGYLSSTGVYGHSGGAWVDEDYPANPTTELGRLRL 194 (364)
Q Consensus 128 ~~~~~~~~~-~~~~~~----~~~~~l~~a~~--------~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~~sK~ 194 (364)
++....... ..+... ....|+..... ..+-.++|++||...+.... ....|+.+|.
T Consensus 79 AG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~Iv~isS~~~~~~~~-----------~~~~Y~asKa 147 (235)
T d1ooea_ 79 AGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAAMGPTP-----------SMIGYGMAKA 147 (235)
T ss_dssp CCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCT-----------TBHHHHHHHH
T ss_pred CcccccccccccCcHHHHhhHhhhHHHHHHHHhhhcccccccceEEEEeccHHhcCCcc-----------cccchHHHHH
Confidence 875333221 122111 12334433321 11125899999876442222 2368999999
Q ss_pred HHHHHHHHhhhh-----cCCcEEEEEecceecCCCChHHHHHHhcCcccccccccCCcccccccHHHHHHHHHHHccCC-
Q 017914 195 SAEKGWLNLGRD-----LGISAQVFRLGGIYGPGRSSVDTIIKQLPLSEGQKMRRARQYTSRIHVDDICQVLSASIDKP- 268 (364)
Q Consensus 195 ~~E~~~~~~~~~-----~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~- 268 (364)
+.+.+.+.++.+ .++.+..+.||.+-.+ ..... +. ......++..+|+++.++..+..+
T Consensus 148 al~~l~~~la~e~~~~~~~i~v~~i~Pg~~~T~---~~~~~-----~~-------~~~~~~~~~~~~va~~~~~~l~~~~ 212 (235)
T d1ooea_ 148 AVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTP---MNRKW-----MP-------NADHSSWTPLSFISEHLLKWTTETS 212 (235)
T ss_dssp HHHHHHHHHHSTTSSCCTTCEEEEEEESCBCCH---HHHHH-----ST-------TCCGGGCBCHHHHHHHHHHHHHCGG
T ss_pred HHHHHHHHHHHHhccCCCceEEEEEecCcCcCc---chhhh-----Cc-------CCccccCCCHHHHHHHHHHHhcCcc
Confidence 999999988644 3678888999887432 11111 11 011234578999999987665443
Q ss_pred ---CCCceEEEe
Q 017914 269 ---SAWNVYNVV 277 (364)
Q Consensus 269 ---~~g~~~~i~ 277 (364)
..|..+.+.
T Consensus 213 ~~~~tG~~i~v~ 224 (235)
T d1ooea_ 213 SRPSSGALLKIT 224 (235)
T ss_dssp GCCCTTCEEEEE
T ss_pred ccCCCceEEEEE
Confidence 347666663
|
| >d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 11-beta-hydroxysteroid dehydrogenase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.38 E-value=4.6e-12 Score=108.32 Aligned_cols=186 Identities=10% Similarity=0.023 Sum_probs=118.5
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhh-------CCceEEEccCChhhH---------Hhhc
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQ-------SGFDVHLFNANETAL---------MILT 119 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~-------~~~~~~~~D~~~~~~---------~~~~ 119 (364)
..+|++|||| ++.||++++++|+++|++|++.+|+.++.+.+.. ..+..+..|+.+.+. ....
T Consensus 12 L~GK~alITGassGIG~aiA~~la~~G~~Vil~~r~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~g 91 (269)
T d1xu9a_ 12 LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLMG 91 (269)
T ss_dssp GTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHHT
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhhhhcccchhhhhhhhhHHHHHHHHHHHHHHhC
Confidence 5679999999 8999999999999999999999999877655422 345677788887543 1224
Q ss_pred cCceeeEEEEecCCCCCCCChhh----hHHHHHHH----------HhhcCCccEEEEEccceeecCCCCccccCCCCCCC
Q 017914 120 TLKNYTHLLVSIPPLEGTGDPML----KHGELLRS----------TLMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANP 185 (364)
Q Consensus 120 ~~d~v~~~~~~~~~~~~~~~~~~----~~~~~l~~----------a~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~ 185 (364)
..|.+++.++............. ....|+.. .+++. -.++|++||...+-. ...
T Consensus 92 ~~~~li~nag~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~lp~m~~~-~G~ii~isS~~~~~~-----------~p~ 159 (269)
T d1xu9a_ 92 GLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQS-NGSIVVVSSLAGKVA-----------YPM 159 (269)
T ss_dssp SCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEEEGGGTSC-----------CTT
T ss_pred CccccccccccccccccccCCHHHhhhheeeehhhHHHHHHHHHHHHHhc-CCcceEeccchhcCC-----------CCC
Confidence 56777777655433322222211 11222222 22232 258999988653311 113
Q ss_pred CChhHHHHHHHHHHHHHhhhh-----cCCcEEEEEecceecCCCChHHHHHHhcCcccccccccCCcccccccHHHHHHH
Q 017914 186 TTELGRLRLSAEKGWLNLGRD-----LGISAQVFRLGGIYGPGRSSVDTIIKQLPLSEGQKMRRARQYTSRIHVDDICQV 260 (364)
Q Consensus 186 ~~~Y~~sK~~~E~~~~~~~~~-----~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~ 260 (364)
...|+.||.+.+.+.+.++.+ .+++++.+.||.+-.+ . ...... +......+..+++|+.
T Consensus 160 ~~~Y~asKaal~~~~~~La~El~~~~~~I~V~~v~PG~v~T~---~---~~~~~~---------~~~~~~~~~~e~~a~~ 224 (269)
T d1xu9a_ 160 VAAYSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTE---T---AMKAVS---------GIVHMQAAPKEECALE 224 (269)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEECCBCCH---H---HHHHSC---------GGGGGGCBCHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHHhhhcCCCEEEEEEecCcCCCc---H---HHHhcc---------CCccccCCCHHHHHHH
Confidence 468999999999998888643 3688899999987431 1 111110 0011223668999999
Q ss_pred HHHHccCCC
Q 017914 261 LSASIDKPS 269 (364)
Q Consensus 261 ~~~~l~~~~ 269 (364)
++..+....
T Consensus 225 i~~~~~~~~ 233 (269)
T d1xu9a_ 225 IIKGGALRQ 233 (269)
T ss_dssp HHHHHHTTC
T ss_pred HHHHhhcCC
Confidence 988776543
|
| >d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase sniffer species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=99.36 E-value=6.7e-12 Score=106.01 Aligned_cols=156 Identities=15% Similarity=-0.007 Sum_probs=103.6
Q ss_pred CCeEEEEc-CChhhHHHHHHHHh---CCCEEEEEEeCchhhhhhhh-----CCceEEEccCChhhH-----Hhh------
Q 017914 59 PNRMLILG-MGFVGRIFAEKIKN---QGWVVSGTCTNVMKKKELEQ-----SGFDVHLFNANETAL-----MIL------ 118 (364)
Q Consensus 59 ~~~vlVtG-tG~iG~~l~~~L~~---~g~~V~~~~r~~~~~~~l~~-----~~~~~~~~D~~~~~~-----~~~------ 118 (364)
||+||||| ++.||+.++++|++ +|++|++.+|+.++.+.+.+ .++.++.+|++|++. +.+
T Consensus 2 MKtilITGas~GIG~a~a~~l~~~a~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~ 81 (248)
T d1snya_ 2 MNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHSNIHILEIDLRNFDAYDKLVADIEGVTKD 81 (248)
T ss_dssp CSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHHHHHHCTTEEEEECCTTCGGGHHHHHHHHHHHHGG
T ss_pred cCEEEEeCCCCHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHhcCCcEEEEEEEeccHHHHHHHHhhhHHHhhc
Confidence 68999999 89999999999974 69999999999877655432 578899999999653 211
Q ss_pred ccCceeeEEEEecCCCCCCCC-hh----hhHHHHHHHH----------hhc-----------CCccEEEEEccceeecCC
Q 017914 119 TTLKNYTHLLVSIPPLEGTGD-PM----LKHGELLRST----------LMN-----------GHLQWLGYLSSTGVYGHS 172 (364)
Q Consensus 119 ~~~d~v~~~~~~~~~~~~~~~-~~----~~~~~~l~~a----------~~~-----------~~~~r~v~~Ss~~vy~~~ 172 (364)
..+|++++.++.........+ .. .....|+... +++ .+..++|.+||..-. .
T Consensus 82 ~~iDiLvnNAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~p~l~~~~~~~~~~~~~~~~g~ii~i~S~~g~--~ 159 (248)
T d1snya_ 82 QGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGS--I 159 (248)
T ss_dssp GCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCGGGC--S
T ss_pred CCcceEEeeccccccCcccccCCHHHHHHHHHhccccHHHHHHHHHHHHHHhhhccccccccccccccccccccccc--c
Confidence 347888888775444322211 11 1122232222 111 234689999885321 1
Q ss_pred CCccccCCCCCCCCChhHHHHHHHHHHHHHhhh---hcCCcEEEEEecceecC
Q 017914 173 GGAWVDEDYPANPTTELGRLRLSAEKGWLNLGR---DLGISAQVFRLGGIYGP 222 (364)
Q Consensus 173 ~~~~~~E~~~~~~~~~Y~~sK~~~E~~~~~~~~---~~~~~~~ilRp~~v~g~ 222 (364)
.. .+......|+.||.+...+.+.++. ..|++++.|.||.+-.+
T Consensus 160 ~~------~~~~~~~~Y~aSKaal~~lt~~la~e~~~~gI~vn~v~PG~v~T~ 206 (248)
T d1snya_ 160 QG------NTDGGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTD 206 (248)
T ss_dssp TT------CCSCCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCST
T ss_pred CC------CCCCChHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCCCcccCC
Confidence 11 1111235799999999999888764 34899999999988543
|
| >d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Leishmania major [TaxId: 5664]
Probab=99.29 E-value=8.1e-11 Score=101.36 Aligned_cols=203 Identities=11% Similarity=-0.047 Sum_probs=120.2
Q ss_pred CCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchh-hhhhh-------hCCceEE-----------------EccCCh
Q 017914 59 PNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMK-KKELE-------QSGFDVH-----------------LFNANE 112 (364)
Q Consensus 59 ~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~-~~~l~-------~~~~~~~-----------------~~D~~~ 112 (364)
++.+|||| ++.||+++++.|+++|++|++.+|+... .+.+. ......+ .+|+++
T Consensus 2 ~pVAlITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~dv~~ 81 (284)
T d1e7wa_ 2 VPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPVTL 81 (284)
T ss_dssp CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----CCCBCH
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCCHHHHHHHHHHHHhhcCCceEEEEeecccccccccccccccccCCC
Confidence 45789998 8999999999999999999998775433 22221 1222333 445776
Q ss_pred hhH--H-------hhccCceeeEEEEecCCCCCCCCh---hh---------------hHHHHHHHH--------------
Q 017914 113 TAL--M-------ILTTLKNYTHLLVSIPPLEGTGDP---ML---------------KHGELLRST-------------- 151 (364)
Q Consensus 113 ~~~--~-------~~~~~d~v~~~~~~~~~~~~~~~~---~~---------------~~~~~l~~a-------------- 151 (364)
.+. . .+..+|+++|+++........... +. ....|+...
T Consensus 82 ~~~v~~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~ 161 (284)
T d1e7wa_ 82 FTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGT 161 (284)
T ss_dssp HHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHHHHhCCCCEEEecCCccCCCchhhCCHHHhhhhhhhHHHHHHHHHHHHhhheeeeeeeeccccchhhhh
Confidence 542 1 234689999988765443211100 00 011121111
Q ss_pred --hhcCCccEEEEEccceeecCCCCccccCCCCCCCCChhHHHHHHHHHHHHHhhhh---cCCcEEEEEecceecCCCC-
Q 017914 152 --LMNGHLQWLGYLSSTGVYGHSGGAWVDEDYPANPTTELGRLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRS- 225 (364)
Q Consensus 152 --~~~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~- 225 (364)
.+..+..++|++++..... +......|+.+|...+.+.+.++.+ .|+++..|.||..-.....
T Consensus 162 ~~~~~~~~~~ii~~~s~~~~~-----------~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~t~~~~~~~ 230 (284)
T d1e7wa_ 162 PAKHRGTNYSIINMVDAMTNQ-----------PLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVDDMP 230 (284)
T ss_dssp CGGGSCSCEEEEEECCTTTTS-----------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCGGGSC
T ss_pred HHHhcCCCCcccccccccccC-----------CccceeeeccccccchhhhHHHHHHhCCccccccccccccccccccCC
Confidence 1123344677777654221 1123468999999999999988754 4899999999964222111
Q ss_pred --hHHHHHHhcCcccccccccCCcccccccHHHHHHHHHHHccCCC---CCceEEEeCCCCCC
Q 017914 226 --SVDTIIKQLPLSEGQKMRRARQYTSRIHVDDICQVLSASIDKPS---AWNVYNVVDDDPAP 283 (364)
Q Consensus 226 --~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~---~g~~~~i~~~~~~s 283 (364)
....+....++ . .-+...+|+|++++.++.... .|+++.+.+|..++
T Consensus 231 ~~~~~~~~~~~pl--~---------~R~~~peeiA~~v~fL~S~~s~~itG~~i~VDGG~sl~ 282 (284)
T d1e7wa_ 231 PAVWEGHRSKVPL--Y---------QRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYSLT 282 (284)
T ss_dssp HHHHHHHHTTCTT--T---------TSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred HHHHHHHHhcCCC--C---------CCCCCHHHHHHHHHHHhCchhcCccCCeEEECcChhcc
Confidence 11111111111 0 112568999999999987543 48999998875443
|
| >d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.27 E-value=9.5e-12 Score=106.76 Aligned_cols=184 Identities=9% Similarity=-0.090 Sum_probs=114.7
Q ss_pred CCeE-EEEc-CChhhHHHHHHHHhC-CCEEEEEEeCchhhhhh----hh--CCceEEEccCChhhH---------Hhhcc
Q 017914 59 PNRM-LILG-MGFVGRIFAEKIKNQ-GWVVSGTCTNVMKKKEL----EQ--SGFDVHLFNANETAL---------MILTT 120 (364)
Q Consensus 59 ~~~v-lVtG-tG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~l----~~--~~~~~~~~D~~~~~~---------~~~~~ 120 (364)
+|+| |||| ++.||..++++|+++ |++|++.+|+.++.+.. .. .++.++.+|++|.+. +.+..
T Consensus 2 g~rVAlVTGas~GIG~a~A~~la~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dvs~~~sv~~~~~~~~~~~g~ 81 (275)
T d1wmaa1 2 GIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYGG 81 (275)
T ss_dssp CCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred CCeEEEECCCCCHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEEecCCHHHHHHHHHHHHHhcCC
Confidence 4666 7889 899999999999986 89999999998775543 22 467899999999664 12245
Q ss_pred CceeeEEEEecCCCCCCCChhh----hHHHHHHHHh----------hcCCccEEEEEccceeec-CCCCcc---------
Q 017914 121 LKNYTHLLVSIPPLEGTGDPML----KHGELLRSTL----------MNGHLQWLGYLSSTGVYG-HSGGAW--------- 176 (364)
Q Consensus 121 ~d~v~~~~~~~~~~~~~~~~~~----~~~~~l~~a~----------~~~~~~r~v~~Ss~~vy~-~~~~~~--------- 176 (364)
+|+++|.|+............. ....|+.... ++. .|+|++||..... .....+
T Consensus 82 iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~--g~ivnisS~~~~~~~~~~~~y~~~k~~~~ 159 (275)
T d1wmaa1 82 LDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQ--GRVVNVSSIMSVRALKSCSPELQQKFRSE 159 (275)
T ss_dssp EEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEE--EEEEEECCHHHHHHHHTSCHHHHHHHHCS
T ss_pred cEEEEEcCCcCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc--CCcccccccceeccccccchhhhhhhccc
Confidence 7888888876544332221111 1222333322 232 4899999854321 000000
Q ss_pred --------------------ccCCCCCCCCChhHHHHHHHHHHHHHhhhh-------cCCcEEEEEecceecCCCChHHH
Q 017914 177 --------------------VDEDYPANPTTELGRLRLSAEKGWLNLGRD-------LGISAQVFRLGGIYGPGRSSVDT 229 (364)
Q Consensus 177 --------------------~~E~~~~~~~~~Y~~sK~~~E~~~~~~~~~-------~~~~~~ilRp~~v~g~~~~~~~~ 229 (364)
.....+..+...|+.+|.....+.+.++++ .++.+..+.||++-.+-...
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aY~~sK~a~~~~t~~la~~l~~~~~~~~I~vn~v~PG~v~T~m~~~--- 236 (275)
T d1wmaa1 160 TITEEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMAGP--- 236 (275)
T ss_dssp SCCHHHHHHHHHHHHHHHHTTCTTTTTCCSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBCSTTTCT---
T ss_pred ccchhhhccccccchhcccccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecccccCCcccC---
Confidence 000112235568999999988877655432 38999999999875432110
Q ss_pred HHHhcCcccccccccCCcccccccHHHHHHHHHHHcc
Q 017914 230 IIKQLPLSEGQKMRRARQYTSRIHVDDICQVLSASID 266 (364)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~ 266 (364)
......+|.|+.++.++.
T Consensus 237 -------------------~~~~~pee~A~~~~~~a~ 254 (275)
T d1wmaa1 237 -------------------KATKSPEEGAETPVYLAL 254 (275)
T ss_dssp -------------------TCSBCHHHHTHHHHHHHS
T ss_pred -------------------cccCCHHHHHHHHHHHHc
Confidence 011357899998887654
|
| >d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]
Probab=99.26 E-value=1.2e-10 Score=99.44 Aligned_cols=209 Identities=9% Similarity=0.009 Sum_probs=119.6
Q ss_pred CCCCCeEEEEc-CC--hhhHHHHHHHHhCCCEEEEEEeCchhhh-hhh---hCCceEEEccCChhhH---------Hhhc
Q 017914 56 WQSPNRMLILG-MG--FVGRIFAEKIKNQGWVVSGTCTNVMKKK-ELE---QSGFDVHLFNANETAL---------MILT 119 (364)
Q Consensus 56 ~~~~~~vlVtG-tG--~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~l~---~~~~~~~~~D~~~~~~---------~~~~ 119 (364)
...+|+||||| +| .||.++++.|+++|++|++..|+..+.. .+. ..+...+.+|+++.+. ..+.
T Consensus 3 ~l~gK~~lItGaag~~GIG~aiA~~la~~Ga~Vil~~~~~~~~~~~~~~~~~~~~~~~~~dv~~~~~~~~~~~~v~~~~~ 82 (268)
T d2h7ma1 3 LLDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRLPAKAPLLELDVQNEEHLASLAGRVTEAIG 82 (268)
T ss_dssp TTTTCEEEECCCSSTTCHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHTTSSSCCCEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred CCCCCEEEEECCCCCCHHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHcCCceeeEeeecccccccccccchhhhccc
Confidence 35678999999 65 4999999999999999999999876542 222 2456788999998642 1122
Q ss_pred ---cCceeeEEEEecCCCCC-C----CChhhhHHH----HH------HHHhh-cCCccEEEEEccceeecCCCCccccCC
Q 017914 120 ---TLKNYTHLLVSIPPLEG-T----GDPMLKHGE----LL------RSTLM-NGHLQWLGYLSSTGVYGHSGGAWVDED 180 (364)
Q Consensus 120 ---~~d~v~~~~~~~~~~~~-~----~~~~~~~~~----~l------~~a~~-~~~~~r~v~~Ss~~vy~~~~~~~~~E~ 180 (364)
.+|.++|+++..+.... . ......... ++ ..+.. ..+....+.++|......
T Consensus 83 ~~~~ld~~i~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~~~~~~--------- 153 (268)
T d2h7ma1 83 AGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNPGGSIVGMDFDPSRA--------- 153 (268)
T ss_dssp TTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECCCSSC---------
T ss_pred cCCCcceeeecccccCccccccccccccchhhhhhhhhhhhhHHHHHHHHHhhhccccccccccccccccc---------
Confidence 24555565543221111 1 111111111 11 11111 111223444443322211
Q ss_pred CCCCCCChhHHHHHHHHHHHHHhhhh---cCCcEEEEEecceecCC--------CCh-----HHHHHHhcCccccccccc
Q 017914 181 YPANPTTELGRLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPG--------RSS-----VDTIIKQLPLSEGQKMRR 244 (364)
Q Consensus 181 ~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~--------~~~-----~~~~~~~~~~~~~~~~~~ 244 (364)
......|+.+|...+.+.+.++.+ .|+++..|.||.+-.+. ... ...+.... ....++
T Consensus 154 --~p~~~~y~~sK~a~~~ltr~lA~e~~~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~pl-- 227 (268)
T d2h7ma1 154 --MPAYNWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGW--DQRAPI-- 227 (268)
T ss_dssp --CTTTHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCHHHHHHHTTTTCHHHHHHHHHHHHHH--HHHCTT--
T ss_pred --CcccchhhccccchhhccccchhhhhccCCcceEEecCCCCChhhhhhccchhhhhhccchHHHHHHH--HhcCCC--
Confidence 112357999999999999988754 47999999999875431 110 00111100 000000
Q ss_pred CCcccccccHHHHHHHHHHHccCCC---CCceEEEeCCCCC
Q 017914 245 ARQYTSRIHVDDICQVLSASIDKPS---AWNVYNVVDDDPA 282 (364)
Q Consensus 245 ~~~~~~~i~v~Dva~~~~~~l~~~~---~g~~~~i~~~~~~ 282 (364)
.+-+...+|+|++++.++.... .|+++.+.+|...
T Consensus 228 ---~rr~~~p~dva~~v~fL~Sd~a~~iTG~~i~vDGG~~~ 265 (268)
T d2h7ma1 228 ---GWNMKDATPVAKTVCALLSDWLPATTGDIIYADGGAHT 265 (268)
T ss_dssp ---CCCTTCCHHHHHHHHHHHSSSCTTCCSEEEEESTTGGG
T ss_pred ---CCCCCCHHHHHHHHHHHhCchhcCccCCEEEECcCccc
Confidence 1223568999999999986543 4889998887543
|
| >d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Trypanosoma cruzi [TaxId: 5693]
Probab=99.25 E-value=1.7e-10 Score=98.29 Aligned_cols=199 Identities=12% Similarity=0.013 Sum_probs=119.7
Q ss_pred CeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhh-hhh----h---hCCceEEEccCCh----hhH---------Hh
Q 017914 60 NRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKK-KEL----E---QSGFDVHLFNANE----TAL---------MI 117 (364)
Q Consensus 60 ~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~-~~l----~---~~~~~~~~~D~~~----~~~---------~~ 117 (364)
..+|||| ++.||+++++.|+++|++|++.+|+.++. +.+ . ......+..|..+ .+. +.
T Consensus 2 ~vAlVTGas~GIG~aia~~la~~G~~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (266)
T d1mxha_ 2 PAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCSFRA 81 (266)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHHHHHhhcCCceEEEecccccchhHHHHHHHHHHHHHHH
Confidence 4689999 89999999999999999999999986543 221 1 1344555555543 111 12
Q ss_pred hccCceeeEEEEecCCCCCCC----------ChhhhH-----HHHHHHHh------h---------cCCccEEEEEccce
Q 017914 118 LTTLKNYTHLLVSIPPLEGTG----------DPMLKH-----GELLRSTL------M---------NGHLQWLGYLSSTG 167 (364)
Q Consensus 118 ~~~~d~v~~~~~~~~~~~~~~----------~~~~~~-----~~~l~~a~------~---------~~~~~r~v~~Ss~~ 167 (364)
+..+|+++|.++......... ...... ..|+.... . ......++.+|+..
T Consensus 82 ~g~iDilvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (266)
T d1mxha_ 82 FGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDAM 161 (266)
T ss_dssp HSCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------CCCEEEEEECCGG
T ss_pred hCCCCEEEECCccCCCCcccccccccchhcccccccccccccccccccccchhhhhccccccccccccccccchhhhhcc
Confidence 345888888887654332110 000000 01111110 0 12233455565544
Q ss_pred eecCCCCccccCCCCCCCCChhHHHHHHHHHHHHHhhhh---cCCcEEEEEecceecCCCCh---HHHHHHhcCcccccc
Q 017914 168 VYGHSGGAWVDEDYPANPTTELGRLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRSS---VDTIIKQLPLSEGQK 241 (364)
Q Consensus 168 vy~~~~~~~~~E~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~---~~~~~~~~~~~~~~~ 241 (364)
..... .....|+.+|...+.+.+.++.+ .|+++..|.||.+..+.... ...+....++ +
T Consensus 162 ~~~~~-----------~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~i~t~~~~~~~~~~~~~~~~pl--~-- 226 (266)
T d1mxha_ 162 TDLPL-----------PGFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLPPAMPQETQEEYRRKVPL--G-- 226 (266)
T ss_dssp GGSCC-----------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCCSSSCHHHHHHHHTTCTT--T--
T ss_pred ccccC-----------cchhhhhhhHHHHhhhHHHHHHHhCccCcEEEEeccCcEeccccCCHHHHHHHHhcCCC--C--
Confidence 32111 13467999999999999888754 58999999999886554222 1222221111 1
Q ss_pred cccCCcccccccHHHHHHHHHHHccCCC---CCceEEEeCCC
Q 017914 242 MRRARQYTSRIHVDDICQVLSASIDKPS---AWNVYNVVDDD 280 (364)
Q Consensus 242 ~~~~~~~~~~i~v~Dva~~~~~~l~~~~---~g~~~~i~~~~ 280 (364)
+-+...+|+|++++.++.... .|+++.+.+|-
T Consensus 227 -------r~~~~peeva~~v~fL~s~~s~~itG~~i~vDGG~ 261 (266)
T d1mxha_ 227 -------QSEASAAQIADAIAFLVSKDAGYITGTTLKVDGGL 261 (266)
T ss_dssp -------SCCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred -------CCCCCHHHHHHHHHHHhCchhCCccCCeEEECccH
Confidence 112468999999999997653 58999988774
|
| >d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3-alpha-hydroxysteroid dehydrogenase species: Comamonas testosteroni [TaxId: 285]
Probab=99.06 E-value=2.7e-09 Score=90.18 Aligned_cols=206 Identities=9% Similarity=0.009 Sum_probs=106.3
Q ss_pred CCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCChhhH------Hh----hccCceeeEE
Q 017914 59 PNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETAL------MI----LTTLKNYTHL 127 (364)
Q Consensus 59 ~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~------~~----~~~~d~v~~~ 127 (364)
||.||||| ++.||++++++|+++|++|++++|+..+. ..|+.+.+. .. ...+|.+++.
T Consensus 1 mkVvlITGas~GIG~aiA~~la~~Ga~V~~~~~~~~~~-----------~~d~~~~~~~~~~~~~~~~~~~~~id~lv~~ 69 (257)
T d1fjha_ 1 MSIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEV-----------IADLSTAEGRKQAIADVLAKCSKGMDGLVLC 69 (257)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSE-----------ECCTTSHHHHHHHHHHHHTTCTTCCSEEEEC
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECChHHH-----------HHHhcCHHHHHHHHHHHHHHhCCCCcEEEEc
Confidence 57789999 89999999999999999999999975431 245554321 11 1346777776
Q ss_pred EEecCCCCCCCChhh---hH----HHHHHHHhhcCCccEEEEEccceeecCC-CCccc----------------cCCCCC
Q 017914 128 LVSIPPLEGTGDPML---KH----GELLRSTLMNGHLQWLGYLSSTGVYGHS-GGAWV----------------DEDYPA 183 (364)
Q Consensus 128 ~~~~~~~~~~~~~~~---~~----~~~l~~a~~~~~~~r~v~~Ss~~vy~~~-~~~~~----------------~E~~~~ 183 (364)
++.......+..... .. ..................+++....... ...+. ......
T Consensus 70 Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~i~s~~~~~~~~ 149 (257)
T d1fjha_ 70 AGLGPQTKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGEEAKARAIVEHAGEQ 149 (257)
T ss_dssp CCCCTTCSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSSCGGGCTTHHHHHHTCHHHHHHHHHTCCTT
T ss_pred CCCCCcHHHHHHHHHHHHHHHHHHHHHhhhhhhhhccCcceeeeeccccchhhhhhhhhhhccCCcEEEEeeehhccCCC
Confidence 643222211111000 00 0111112223333344444432211000 00000 000011
Q ss_pred CCCChhHHHHHHHHHHHHHhhhh---cCCcEEEEEecceecCCCChHHHHHHhcCcccccccccCCcccccccHHHHHHH
Q 017914 184 NPTTELGRLRLSAEKGWLNLGRD---LGISAQVFRLGGIYGPGRSSVDTIIKQLPLSEGQKMRRARQYTSRIHVDDICQV 260 (364)
Q Consensus 184 ~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~ 260 (364)
.....|+.+|...+.+.+.++.+ .|+++..|.||.+-.+.-. ........... .........-+...+|+|++
T Consensus 150 ~~~~~Y~asKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~~~---~~~~~~~~~~~-~~~~~~PlgR~g~p~eva~~ 225 (257)
T d1fjha_ 150 GGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQ---AGLQDPRYGES-IAKFVPPMGRRAEPSEMASV 225 (257)
T ss_dssp HHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC-------------------------CCCSTTSCCCTHHHHHH
T ss_pred cchHHHHHHhhhhhccccccccccccccccccccccCCcCChhHH---hhcCCHHHHHH-HHhcCCCCCCCcCHHHHHHH
Confidence 11235999999999999998743 4899999999998654311 11110000000 00000001123568999999
Q ss_pred HHHHccCCC---CCceEEEeCC
Q 017914 261 LSASIDKPS---AWNVYNVVDD 279 (364)
Q Consensus 261 ~~~~l~~~~---~g~~~~i~~~ 279 (364)
++.++.... .|+++.+.+|
T Consensus 226 v~fL~S~~s~~itG~~i~vDGG 247 (257)
T d1fjha_ 226 IAFLMSPAASYVHGAQIVIDGG 247 (257)
T ss_dssp HHHHTSGGGTTCCSCEEEESTT
T ss_pred HHHHhCchhCCccCceEEeCCC
Confidence 999987543 4889998776
|
| >d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Oil seed rape (Brassica napus) [TaxId: 3708]
Probab=99.06 E-value=2.9e-09 Score=91.99 Aligned_cols=203 Identities=10% Similarity=-0.013 Sum_probs=113.2
Q ss_pred CCCCCeEEEEc-CC--hhhHHHHHHHHhCCCEEEEEEeCchhhhhh---h----------h----CCc-eEEEcc--CCh
Q 017914 56 WQSPNRMLILG-MG--FVGRIFAEKIKNQGWVVSGTCTNVMKKKEL---E----------Q----SGF-DVHLFN--ANE 112 (364)
Q Consensus 56 ~~~~~~vlVtG-tG--~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l---~----------~----~~~-~~~~~D--~~~ 112 (364)
+..+|++|||| +| .||+.+++.|+++|++|++..|++...... . . ... .....| +.+
T Consensus 5 ~L~gK~alVTGass~~GIG~aiA~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (297)
T d1d7oa_ 5 DLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVLPDGSLMEIKKVYPLDAVFDN 84 (297)
T ss_dssp CCTTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTGGGBCTTSSBCCEEEEEEECTTCCS
T ss_pred CCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCchhhhhhHHHHHHhhhhhhhhhhhhhhhhhhhhhhhhhhccc
Confidence 46789999999 66 799999999999999999999865321100 0 0 011 122222 111
Q ss_pred ---------------------hh-H-----HhhccCceeeEEEEecCCCC-CCCC-hhh----hHHHHHH------HHhh
Q 017914 113 ---------------------TA-L-----MILTTLKNYTHLLVSIPPLE-GTGD-PML----KHGELLR------STLM 153 (364)
Q Consensus 113 ---------------------~~-~-----~~~~~~d~v~~~~~~~~~~~-~~~~-~~~----~~~~~l~------~a~~ 153 (364)
.+ + +.+..+|.++|.++...... ...+ ... ....|+. .++.
T Consensus 85 ~~~~~~dv~~~~~~~~~~~~~~~~~~~~~~~~~G~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~ 164 (297)
T d1d7oa_ 85 PEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSHFL 164 (297)
T ss_dssp GGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHG
T ss_pred cccchhhhhhhhhhhhccHHHHHHHHHHHHHHhCCCcccccccccccccccchhhhhcccccccccchhhhhhhhhhHHH
Confidence 01 1 12345788888776432211 1111 111 1111221 1111
Q ss_pred --cCCccEEEEEccceeecCCCCccccCCCCCCCCChhHHHHHHHHHHHHHhh----hhcCCcEEEEEecceecCCCC--
Q 017914 154 --NGHLQWLGYLSSTGVYGHSGGAWVDEDYPANPTTELGRLRLSAEKGWLNLG----RDLGISAQVFRLGGIYGPGRS-- 225 (364)
Q Consensus 154 --~~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~~sK~~~E~~~~~~~----~~~~~~~~ilRp~~v~g~~~~-- 225 (364)
...-.+.+.+++.+.... .......|..+|...+.+.+.++ .++|++++.|.||.+..+...
T Consensus 165 ~~~~~~g~~~~~~~~~~~~~----------~~~~~~~y~~aKaa~~~l~~~~a~e~~~~~gIrvN~I~PG~i~T~~~~~~ 234 (297)
T d1d7oa_ 165 PIMNPGGASISLTYIASERI----------IPGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAAKAI 234 (297)
T ss_dssp GGEEEEEEEEEEECGGGTSC----------CTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCBCCCSSCC
T ss_pred HHhhcCCcceeeeehhhccc----------ccccccceecccccccccccccchhccccceEEecccccccccchhhhhc
Confidence 111123444544332111 11133579999999888776654 345899999999999776532
Q ss_pred -hHH----HHHHhcCcccccccccCCcccccccHHHHHHHHHHHccCCC---CCceEEEeCCC
Q 017914 226 -SVD----TIIKQLPLSEGQKMRRARQYTSRIHVDDICQVLSASIDKPS---AWNVYNVVDDD 280 (364)
Q Consensus 226 -~~~----~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~---~g~~~~i~~~~ 280 (364)
... .+....+++ -+...+|+|.+++.++.... .|+++.+.+|.
T Consensus 235 ~~~~~~~~~~~~~~Plg------------R~~~peevA~~v~fL~S~~a~~itGq~i~vDGG~ 285 (297)
T d1d7oa_ 235 GFIDTMIEYSYNNAPIQ------------KTLTADEVGNAAAFLVSPLASAITGATIYVDNGL 285 (297)
T ss_dssp SHHHHHHHHHHHHSSSC------------CCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTG
T ss_pred cCCHHHHHHHHhCCCCC------------CCCCHHHHHHHHHHHhCchhcCCcCceEEECcCH
Confidence 111 222222221 12568999999999987542 48999887773
|
| >d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=98.89 E-value=2.3e-08 Score=87.39 Aligned_cols=152 Identities=10% Similarity=-0.010 Sum_probs=87.8
Q ss_pred CCeEEEEc-C--ChhhHHHHHHHHhCCCEEEEEEeCchhhhhhh--------h----------CCceEEEc---------
Q 017914 59 PNRMLILG-M--GFVGRIFAEKIKNQGWVVSGTCTNVMKKKELE--------Q----------SGFDVHLF--------- 108 (364)
Q Consensus 59 ~~~vlVtG-t--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~--------~----------~~~~~~~~--------- 108 (364)
.+.+|||| + ..||..+++.|.++|.+|++..+......... . ........
T Consensus 2 ~kVAlITGaa~s~GIG~aiA~~la~~GA~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (329)
T d1uh5a_ 2 EDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTAND 81 (329)
T ss_dssp CCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHTTTTTGGGEETTTEECCEEEEEECCTTCSSGGG
T ss_pred CcEEEEeCCCCCChHHHHHHHHHHHcCCEEEEEeCchhhhhhhHHHHHHhhhhHHHHHHHhhhhhhhcccccceehhhcc
Confidence 46889999 3 37999999999999999999887653221100 0 01122222
Q ss_pred -----------cCChhhH---------HhhccCceeeEEEEecCCCC-CCCC-hhhhH----HHH------HHHHhh--c
Q 017914 109 -----------NANETAL---------MILTTLKNYTHLLVSIPPLE-GTGD-PMLKH----GEL------LRSTLM--N 154 (364)
Q Consensus 109 -----------D~~~~~~---------~~~~~~d~v~~~~~~~~~~~-~~~~-~~~~~----~~~------l~~a~~--~ 154 (364)
|+.+.+. ..+..+|.++|.++...... .+.+ ....+ ..| +..++. .
T Consensus 82 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~k~~~~~m 161 (329)
T d1uh5a_ 82 IDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNIM 161 (329)
T ss_dssp CCHHHHTSHHHHTCCCCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGE
T ss_pred cchhhhhhhhhhhhhHHHHHHHHHHHHHHhCCCCeeccccccccccCCChhhhhhhhhhhhcccchhHHHHHHHHHHhhc
Confidence 3333211 22346788888776544322 1111 11111 112 112221 1
Q ss_pred CCccEEEEEccceeecCCCCccccCCCCCCCCChhHHHHHHHHHHHHHhhh----hcCCcEEEEEeccee
Q 017914 155 GHLQWLGYLSSTGVYGHSGGAWVDEDYPANPTTELGRLRLSAEKGWLNLGR----DLGISAQVFRLGGIY 220 (364)
Q Consensus 155 ~~~~r~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~~ilRp~~v~ 220 (364)
..-.++|.+||.+..... +.....|+.+|...|.+.+.++. ++|+++..|.||.+-
T Consensus 162 ~~~GsIv~iss~~~~~~~----------p~y~~~y~asKaal~~ltr~lA~Ela~~~gIRVNaI~PG~i~ 221 (329)
T d1uh5a_ 162 KPQSSIISLTYHASQKVV----------PGYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLK 221 (329)
T ss_dssp EEEEEEEEEECGGGTSCC----------TTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCC
T ss_pred ccccccccceeehhcccc----------cccchhhhhhhccccccchhhHHHHhcccCcEEEEEecCccc
Confidence 123578888876532111 11235699999999999988763 358999999999774
|
| >d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Ktn Mja218 species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=98.76 E-value=1.9e-08 Score=75.56 Aligned_cols=68 Identities=15% Similarity=0.086 Sum_probs=57.5
Q ss_pred CeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhh-CCceEEEccCChhhH---HhhccCceeeEE
Q 017914 60 NRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQ-SGFDVHLFNANETAL---MILTTLKNYTHL 127 (364)
Q Consensus 60 ~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~-~~~~~~~~D~~~~~~---~~~~~~d~v~~~ 127 (364)
|+|+|+|.|.+|+.+++.|.+.|++|++++.+++....+.+ .+..++.+|.++++. ..+..+|.++.+
T Consensus 1 M~IvI~G~G~~G~~la~~L~~~g~~v~vid~d~~~~~~~~~~~~~~vi~Gd~~~~~~l~~~~i~~a~~vv~~ 72 (132)
T d1lssa_ 1 MYIIIAGIGRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEIDALVINGDCTKIKTLEDAGIEDADMYIAV 72 (132)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCSSEEEESCTTSHHHHHHTTTTTCSEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCcceecCChhhhhhhhhhhhhhhccCcccchhhhhhcChhhhhhhccc
Confidence 79999999999999999999999999999999988777654 488999999999885 234566766654
|
| >d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylene-tetrahydromethanopterin dehydrogenase species: Methylobacterium extorquens [TaxId: 408]
Probab=98.75 E-value=6.7e-09 Score=83.40 Aligned_cols=75 Identities=13% Similarity=0.010 Sum_probs=62.9
Q ss_pred CCCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhh-----CCceEEEccCChhhH--HhhccCceeeEE
Q 017914 56 WQSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQ-----SGFDVHLFNANETAL--MILTTLKNYTHL 127 (364)
Q Consensus 56 ~~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~-----~~~~~~~~D~~~~~~--~~~~~~d~v~~~ 127 (364)
+..+|+||||| +|.||+.+++.|+++|++|++++|+.++...+.+ .++....+|+.+.+. +.+.++|.++|+
T Consensus 20 ~l~gK~vlItGasgGIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~iDilin~ 99 (191)
T d1luaa1 20 SVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFKVNVTAAETADDASRAEAVKGAHFVFTA 99 (191)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHTCCCEEEECCSHHHHHHHTTTCSEEEEC
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHhhccchhhcccchHHHHHHHHHHHhccchhhhhhhcccHHHHHHHhcCcCeeeec
Confidence 56789999999 9999999999999999999999999877655432 456778899998664 677899999998
Q ss_pred EEe
Q 017914 128 LVS 130 (364)
Q Consensus 128 ~~~ 130 (364)
++.
T Consensus 100 Ag~ 102 (191)
T d1luaa1 100 GAI 102 (191)
T ss_dssp CCT
T ss_pred Ccc
Confidence 763
|
| >d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Ktn bsu222 species: Bacillus subtilis [TaxId: 1423]
Probab=98.44 E-value=4.5e-07 Score=67.91 Aligned_cols=69 Identities=14% Similarity=0.192 Sum_probs=59.2
Q ss_pred CeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCChhhH---HhhccCceeeEEE
Q 017914 60 NRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETAL---MILTTLKNYTHLL 128 (364)
Q Consensus 60 ~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~---~~~~~~d~v~~~~ 128 (364)
|+++|+|.|.+|+.+++.|.+.|++|++++.+++....+...+..++.+|.++++. ..+..+|.++-..
T Consensus 1 k~~iIiG~G~~G~~la~~L~~~g~~vvvid~d~~~~~~~~~~~~~~~~gd~~~~~~l~~a~i~~a~~vi~~~ 72 (134)
T d2hmva1 1 KQFAVIGLGRFGGSIVKELHRMGHEVLAVDINEEKVNAYASYATHAVIANATEENELLSLGIRNFEYVIVAI 72 (134)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCCEEEESCHHHHHHTTTTCSEEEECCTTCTTHHHHHTGGGCSEEEECC
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCeEEEecCcHHHHHHHHHhCCcceeeecccchhhhccCCccccEEEEEc
Confidence 57889999999999999999999999999999999888888888999999999874 3356777666544
|
| >d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Saccharopine reductase species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=98.20 E-value=2.3e-06 Score=67.28 Aligned_cols=69 Identities=22% Similarity=0.305 Sum_probs=50.7
Q ss_pred CCeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhC--CceEEEccCChhhH--HhhccCceeeEE
Q 017914 59 PNRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQS--GFDVHLFNANETAL--MILTTLKNYTHL 127 (364)
Q Consensus 59 ~~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~--~~~~~~~D~~~~~~--~~~~~~d~v~~~ 127 (364)
.|+|||+|+|.+|+++++.|.++||+|++++|+.++...+.+. .......+..+... ..+...|.++.+
T Consensus 2 ~K~IliiGaG~~G~~~a~~L~~~g~~V~v~dr~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~i~~ 74 (182)
T d1e5qa1 2 TKSVLMLGSGFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGVQHSTPISLDVNDDAALDAEVAKHDLVISL 74 (182)
T ss_dssp CCEEEEECCSTTHHHHHHHHHTTTCEEEEEESCHHHHHHHHTTCTTEEEEECCTTCHHHHHHHHTTSSEEEEC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEECChHHHHHHHhcccccccccccccchhhhHhhhhccceeEee
Confidence 4899999999999999999999999999999999988876542 22333334444332 445666666543
|
| >d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Prephenate dehydrogenase TyrA species: Synechocystis sp. pcc 6803 [TaxId: 1148]
Probab=98.00 E-value=1.6e-05 Score=61.50 Aligned_cols=65 Identities=15% Similarity=0.209 Sum_probs=48.6
Q ss_pred CeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCChhhHHhhccCceeeEEE
Q 017914 60 NRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETALMILTTLKNYTHLL 128 (364)
Q Consensus 60 ~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~~~~~~~d~v~~~~ 128 (364)
|||.|+|.|.+|+.+++.|.++||+|++++|+++..+...+.++.-...| +.+.++++|.|+-+.
T Consensus 1 MkI~iIG~G~mG~~lA~~l~~~g~~V~~~d~~~~~~~~a~~~~~~~~~~~----~~~~~~~~DiIilav 65 (165)
T d2f1ka2 1 MKIGVVGLGLIGASLAGDLRRRGHYLIGVSRQQSTCEKAVERQLVDEAGQ----DLSLLQTAKIIFLCT 65 (165)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTSCSEEES----CGGGGTTCSEEEECS
T ss_pred CEEEEEeecHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHhhccceeee----ecccccccccccccC
Confidence 78999999999999999999999999999999877665554443211111 124678889877543
|
| >d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.91 E-value=1.5e-05 Score=62.12 Aligned_cols=94 Identities=20% Similarity=0.172 Sum_probs=64.8
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCChhhH-Hhh------ccCceeeEEE
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETAL-MIL------TTLKNYTHLL 128 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~-~~~------~~~d~v~~~~ 128 (364)
..+.+|||+| +|.+|...++.+...|.+|+++++++++.+.+.+.+...+ .|..+.++ +.+ .++|.|+.++
T Consensus 27 ~~g~~VlV~Ga~G~vG~~aiq~a~~~G~~vi~~~~~~~~~~~~~~~Ga~~v-i~~~~~~~~~~i~~~t~~~g~d~v~d~~ 105 (174)
T d1yb5a2 27 KAGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIVLQNGAHEV-FNHREVNYIDKIKKYVGEKGIDIIIEML 105 (174)
T ss_dssp CTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSEE-EETTSTTHHHHHHHHHCTTCEEEEEESC
T ss_pred CCCCEEEEEeccccccccccccccccCcccccccccccccccccccCcccc-cccccccHHHHhhhhhccCCceEEeecc
Confidence 3567999999 8999999999999999999999998887777766676543 36666553 211 3467777654
Q ss_pred EecCCCCCCCChhhhHHHHHHHHhhcCCccEEEEEcc
Q 017914 129 VSIPPLEGTGDPMLKHGELLRSTLMNGHLQWLGYLSS 165 (364)
Q Consensus 129 ~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~r~v~~Ss 165 (364)
+. ....+.+..++..| ++|.++.
T Consensus 106 g~------------~~~~~~~~~l~~~G--~iv~~G~ 128 (174)
T d1yb5a2 106 AN------------VNLSKDLSLLSHGG--RVIVVGS 128 (174)
T ss_dssp HH------------HHHHHHHHHEEEEE--EEEECCC
T ss_pred cH------------HHHHHHHhccCCCC--EEEEEec
Confidence 21 12344455555544 7887653
|
| >d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Ketopantoate reductase PanE species: Escherichia coli [TaxId: 562]
Probab=97.84 E-value=8e-06 Score=63.22 Aligned_cols=69 Identities=16% Similarity=0.135 Sum_probs=46.3
Q ss_pred CeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhh--CCceEEEccCChhhHHhhccCceeeEEE
Q 017914 60 NRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQ--SGFDVHLFNANETALMILTTLKNYTHLL 128 (364)
Q Consensus 60 ~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~--~~~~~~~~D~~~~~~~~~~~~d~v~~~~ 128 (364)
|||+|+|+|.+|..++..|.+.||+|.+++|++.....+.. .+.......+.......+..+|.|+.+.
T Consensus 1 MkI~IiGaG~iG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~iii~v 71 (167)
T d1ks9a2 1 MKITVLGCGALGQLWLTALCKQGHEVQGWLRVPQPYCSVNLVETDGSIFNESLTANDPDFLATSDLLLVTL 71 (167)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCSEEEEEEECTTSCEEEEEEEESCHHHHHTCSEEEECS
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCceEEEEcCHHHhhhhccccCCccccccccccchhhhhcccceEEEee
Confidence 79999999999999999999999999999998765443221 1111111111111114556788888765
|
| >d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO) species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=97.73 E-value=1.5e-05 Score=63.39 Aligned_cols=39 Identities=21% Similarity=0.268 Sum_probs=35.4
Q ss_pred CeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhh
Q 017914 60 NRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKEL 98 (364)
Q Consensus 60 ~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l 98 (364)
|||.|+| +|.+|+.|++.|++.||+|++.+|++++.+.+
T Consensus 1 Mki~vigGaG~iG~alA~~la~~G~~V~l~~R~~e~~~~l 40 (212)
T d1jaya_ 1 MRVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAK 40 (212)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHH
T ss_pred CEEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHH
Confidence 7899995 99999999999999999999999998876655
|
| >d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase species: Arthrobacter, strain 1c [TaxId: 1663]
Probab=97.70 E-value=9.1e-05 Score=57.95 Aligned_cols=70 Identities=16% Similarity=0.185 Sum_probs=50.1
Q ss_pred CCeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEE--------EccC--ChhhHHhhccCceeeEEE
Q 017914 59 PNRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVH--------LFNA--NETALMILTTLKNYTHLL 128 (364)
Q Consensus 59 ~~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~--------~~D~--~~~~~~~~~~~d~v~~~~ 128 (364)
.|+|.|+|+|.+|..++..|.++||+|++++|++++.+.+...+.... .... +....+.++++|.|+.+.
T Consensus 1 sk~iaIiGaG~~G~~~A~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~aD~iii~v 80 (184)
T d1bg6a2 1 SKTYAVLGLGNGGHAFAAYLALKGQSVLAWDIDAQRIKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGLAVKDADVILIVV 80 (184)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHTSEEEESSSCCEEECCSEEESCHHHHHTTCSEEEECS
T ss_pred CCEEEEECccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCCchhhhhhhhhhhhhhhhhhhHhHhcCCCEEEEEE
Confidence 379999999999999999999999999999999877666543222211 1111 111115678889888765
|
| >d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: GDP-mannose 6-dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=97.70 E-value=5.1e-05 Score=60.62 Aligned_cols=71 Identities=18% Similarity=0.186 Sum_probs=51.0
Q ss_pred CeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCCh--------------hhH-HhhccCcee
Q 017914 60 NRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANE--------------TAL-MILTTLKNY 124 (364)
Q Consensus 60 ~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~--------------~~~-~~~~~~d~v 124 (364)
|+|.|+|.|++|..++..|+++||+|++++.+.+..+.+.+....+..-++.+ .+. +++..+|.+
T Consensus 1 MkI~ViGlG~vGl~~a~~la~~g~~V~g~D~n~~~i~~ln~g~~p~~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~d~i 80 (202)
T d1mv8a2 1 MRISIFGLGYVGAVCAGCLSARGHEVIGVDVSSTKIDLINQGKSPIVEPGLEALLQQGRQTGRLSGTTDFKKAVLDSDVS 80 (202)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEESCHHHHHHTCSEE
T ss_pred CEEEEECCCHhHHHHHHHHHhCCCcEEEEeCCHHHHHHhcccCCcccchhhhhhhhhhhcccccccCCCHHHHHhhCCEE
Confidence 78999999999999999999999999999998887776654333222222111 001 345678888
Q ss_pred eEEEEe
Q 017914 125 THLLVS 130 (364)
Q Consensus 125 ~~~~~~ 130 (364)
+.++..
T Consensus 81 ~i~VpT 86 (202)
T d1mv8a2 81 FICVGT 86 (202)
T ss_dssp EECCCC
T ss_pred EEecCc
Confidence 887754
|
| >d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Rck domain from putative potassium channel Kch species: Escherichia coli [TaxId: 562]
Probab=97.68 E-value=6.8e-05 Score=56.95 Aligned_cols=69 Identities=10% Similarity=0.085 Sum_probs=55.3
Q ss_pred CeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCchhh----hhhhhCCceEEEccCChhhH---HhhccCceeeEEE
Q 017914 60 NRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMKK----KELEQSGFDVHLFNANETAL---MILTTLKNYTHLL 128 (364)
Q Consensus 60 ~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~~~----~~l~~~~~~~~~~D~~~~~~---~~~~~~d~v~~~~ 128 (364)
.+|+|+|.|-+|+.+++.|.++|++|+++..++++. ..+...++.++.||.++++. ..+..++.++-+.
T Consensus 4 nHiII~G~g~~g~~l~~~L~~~~~~v~vId~d~~~~~~~~~~~~~~~~~vi~Gd~~d~~~L~~a~i~~a~~vi~~~ 79 (153)
T d1id1a_ 4 DHFIVCGHSILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLGDNADVIPGDSNDSSVLKKAGIDRCRAILALS 79 (153)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHCTTCEEEESCTTSHHHHHHHTTTTCSEEEECS
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCCEEEEeccchhHHHHHHHhhcCCcEEEEccCcchHHHHHhccccCCEEEEcc
Confidence 479999999999999999999999999999887542 23334689999999999884 3446677776654
|
| >d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Hydroxyisobutyrate dehydrogenase species: Salmonella typhimurium [TaxId: 90371]
Probab=97.67 E-value=4e-05 Score=58.85 Aligned_cols=64 Identities=13% Similarity=0.257 Sum_probs=52.1
Q ss_pred CeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCChhhHHhhccCceeeEEE
Q 017914 60 NRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETALMILTTLKNYTHLL 128 (364)
Q Consensus 60 ~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~~~~~~~d~v~~~~ 128 (364)
|+|-|+|.|.+|+.+++.|+++||+|++.+|++++.+.+.+.+.... .++. +..+.+|.|+-+.
T Consensus 1 MkIgiIGlG~MG~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~----~~~~-e~~~~~d~ii~~v 64 (161)
T d1vpda2 1 MKVGFIGLGIMGKPMSKNLLKAGYSLVVSDRNPEAIADVIAAGAETA----STAK-AIAEQCDVIITML 64 (161)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEEC----SSHH-HHHHHCSEEEECC
T ss_pred CEEEEEehhHHHHHHHHHHHHCCCeEEEEeCCcchhHHHHHhhhhhc----ccHH-HHHhCCCeEEEEc
Confidence 68999999999999999999999999999999988887766665431 1222 5677889888776
|
| >d1t4ba1 c.2.1.3 (A:1-133,A:355-367) Aspartate beta-semialdehyde dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Aspartate beta-semialdehyde dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=97.61 E-value=7.5e-05 Score=55.89 Aligned_cols=68 Identities=16% Similarity=0.150 Sum_probs=41.4
Q ss_pred CCeEEEEc-CChhhHHHHHHHHhCC----CEEEEEEeCchhhhhhhhCCceEEEccCChhhHHhhccCceeeEEE
Q 017914 59 PNRMLILG-MGFVGRIFAEKIKNQG----WVVSGTCTNVMKKKELEQSGFDVHLFNANETALMILTTLKNYTHLL 128 (364)
Q Consensus 59 ~~~vlVtG-tG~iG~~l~~~L~~~g----~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~~~~~~~d~v~~~~ 128 (364)
|++|.|+| ||++|+.+++.|+++. .+++.+.++...........-.....+..+ ...+.++|.++.++
T Consensus 1 MkkVaIvGATG~VGqeli~~Ll~~~~~p~~~l~~~~ss~s~g~~~~~~~~~~~~~~~~~--~~~~~~~DivF~a~ 73 (146)
T d1t4ba1 1 MQNVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQLGQAAPSFGGTTGTLQDAFD--LEALKALDIIVTCQ 73 (146)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSSTTSBCCGGGTCCCBCEETTC--HHHHHTCSEEEECS
T ss_pred CcEEEEECCccHHHHHHHHHHHhCCCCCeeEEEEeeccccccccccccCCceeeecccc--hhhhhcCcEEEEec
Confidence 57999999 9999999999888763 367777665433222211111111122222 13567889888766
|
| >d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Lactobacillus pentosus [TaxId: 1589]
Probab=97.60 E-value=0.00018 Score=53.91 Aligned_cols=70 Identities=14% Similarity=0.009 Sum_probs=50.0
Q ss_pred CCCCeEEEEcCChhhHHHHHHHHhCC--CEEEEEEeCchhhhh----hh-----hCCceEEEccCChhhHHhhccCceee
Q 017914 57 QSPNRMLILGMGFVGRIFAEKIKNQG--WVVSGTCTNVMKKKE----LE-----QSGFDVHLFNANETALMILTTLKNYT 125 (364)
Q Consensus 57 ~~~~~vlVtGtG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~----l~-----~~~~~~~~~D~~~~~~~~~~~~d~v~ 125 (364)
...|||.|+|+|++|..++..|+.+| .+|+++++++++... +. ........+|+ +.+.++|.|+
T Consensus 3 ~~~~KI~IIGaG~VG~~~A~~l~~~~~~~elvL~D~~~~~~~g~a~Dl~~a~~~~~~~~~~~~d~-----~~~~~adivv 77 (146)
T d1ez4a1 3 PNHQKVVLVGDGAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYSGEY-----SDCKDADLVV 77 (146)
T ss_dssp TTBCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEECCG-----GGGTTCSEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhcCCCcEEEEeecccchhHHHHHHHhccccccCCceEeeccH-----HHhccccEEE
Confidence 34579999999999999999999987 699999998754321 11 12233444443 3568899999
Q ss_pred EEEEec
Q 017914 126 HLLVSI 131 (364)
Q Consensus 126 ~~~~~~ 131 (364)
.+++..
T Consensus 78 itag~~ 83 (146)
T d1ez4a1 78 ITAGAP 83 (146)
T ss_dssp ECCCC-
T ss_pred Eecccc
Confidence 987653
|
| >d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase species: Guinea pig (Cavia porcellus) [TaxId: 10141]
Probab=97.56 E-value=5.1e-05 Score=59.52 Aligned_cols=99 Identities=20% Similarity=0.227 Sum_probs=66.3
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCChhhH----Hhh---ccCceeeEEE
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETAL----MIL---TTLKNYTHLL 128 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~----~~~---~~~d~v~~~~ 128 (364)
..+.+|||+| +|.+|...++.....|.+|+++++++++.+.+.+.+...+ .|..+.++ ... .++|.|+.++
T Consensus 28 ~~G~~VlV~ga~ggvG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~Ga~~v-i~~~~~~~~~~~~~~~~~~Gvd~v~D~v 106 (182)
T d1v3va2 28 KGGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLKQIGFDAA-FNYKTVNSLEEALKKASPDGYDCYFDNV 106 (182)
T ss_dssp CSSCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSEE-EETTSCSCHHHHHHHHCTTCEEEEEESS
T ss_pred CCCCEEEEEeCCCchhHHHHHHHHccCCEEEEeCCCHHHHHHHHhhhhhhh-cccccccHHHHHHHHhhcCCCceeEEec
Confidence 4567999998 8999999999999999999999999888877777776544 23333221 112 4567777765
Q ss_pred EecCCCCCCCChhhhHHHHHHHHhhcCCccEEEEEccceeec
Q 017914 129 VSIPPLEGTGDPMLKHGELLRSTLMNGHLQWLGYLSSTGVYG 170 (364)
Q Consensus 129 ~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~r~v~~Ss~~vy~ 170 (364)
+. ........+++..| +++.++....|+
T Consensus 107 G~------------~~~~~~~~~l~~~G--~~v~~G~~~~~~ 134 (182)
T d1v3va2 107 GG------------EFLNTVLSQMKDFG--KIAICGAISVYN 134 (182)
T ss_dssp CH------------HHHHHHGGGEEEEE--EEEECCCGGGTT
T ss_pred Cc------------hhhhhhhhhccCCC--eEEeecceeecc
Confidence 31 12234455555544 677666554443
|
| >d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Putative enoyl reductase domain of polyketide synthase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=97.54 E-value=6.4e-05 Score=58.91 Aligned_cols=94 Identities=17% Similarity=0.073 Sum_probs=65.9
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCChhhH-Hhh------ccCceeeEEE
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETAL-MIL------TTLKNYTHLL 128 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~-~~~------~~~d~v~~~~ 128 (364)
..+.+|||+| +|.+|...++.+...|.+|++.++++++.+.+.+.+...+ .|..+.++ +.+ .++|.|+.++
T Consensus 24 ~~g~~VlI~ga~g~vG~~~iqla~~~g~~vi~~~~~~~~~~~l~~~Ga~~v-i~~~~~~~~~~v~~~t~~~g~d~v~d~~ 102 (183)
T d1pqwa_ 24 SPGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREMLSRLGVEYV-GDSRSVDFADEILELTDGYGVDVVLNSL 102 (183)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHTTCCSEE-EETTCSTHHHHHHHHTTTCCEEEEEECC
T ss_pred CCCCEEEEECCCCCcccccchhhccccccceeeeccccccccccccccccc-ccCCccCHHHHHHHHhCCCCEEEEEecc
Confidence 3457999998 8999999999999999999999999888877777776643 45555554 222 4577777765
Q ss_pred EecCCCCCCCChhhhHHHHHHHHhhcCCccEEEEEcc
Q 017914 129 VSIPPLEGTGDPMLKHGELLRSTLMNGHLQWLGYLSS 165 (364)
Q Consensus 129 ~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~r~v~~Ss 165 (364)
+ . ......+.+++..| ++|.++.
T Consensus 103 g---------~---~~~~~~~~~l~~~G--~~v~~G~ 125 (183)
T d1pqwa_ 103 A---------G---EAIQRGVQILAPGG--RFIELGK 125 (183)
T ss_dssp C---------T---HHHHHHHHTEEEEE--EEEECSC
T ss_pred c---------c---hHHHHHHHHhcCCC--EEEEEcc
Confidence 3 1 12234455665544 7887654
|
| >d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Hydroxyisobutyrate dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=97.52 E-value=9.2e-05 Score=56.77 Aligned_cols=65 Identities=12% Similarity=0.187 Sum_probs=50.5
Q ss_pred CCeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCChhhHHhhccCceeeEEE
Q 017914 59 PNRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETALMILTTLKNYTHLL 128 (364)
Q Consensus 59 ~~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~~~~~~~d~v~~~~ 128 (364)
|++|-|+|.|.+|+.+++.|+++||+|.+.+|+.++.+.+...+.... .++. +.+..+|.|+-+.
T Consensus 1 M~kIg~IGlG~MG~~iA~~L~~~g~~v~~~d~~~~~~~~~~~~~~~~~----~~~~-e~~~~~diii~~v 65 (162)
T d3cuma2 1 MKQIAFIGLGHMGAPMATNLLKAGYLLNVFDLVQSAVDGLVAAGASAA----RSAR-DAVQGADVVISML 65 (162)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHHTTCEEC----SSHH-HHHTSCSEEEECC
T ss_pred CCEEEEEEEHHHHHHHHHHHHHCCCeEEEEECchhhhhhhhhhhcccc----chhh-hhccccCeeeecc
Confidence 578999999999999999999999999999999888776654443211 1111 5667788777766
|
| >d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: BC N-terminal domain-like domain: Glycinamide ribonucleotide transformylase PurT, N-domain species: Escherichia coli [TaxId: 562]
Probab=97.49 E-value=0.00042 Score=49.05 Aligned_cols=67 Identities=15% Similarity=0.128 Sum_probs=51.0
Q ss_pred CCCeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCChhhH-Hhh---ccCceeeE
Q 017914 58 SPNRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETAL-MIL---TTLKNYTH 126 (364)
Q Consensus 58 ~~~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~-~~~---~~~d~v~~ 126 (364)
...||.|+|+|.+|+-++....+.|++|++++.+++..... -.-.++.+|+.|.+. ..+ ..+|+|..
T Consensus 10 ~~~kigIlGgGQL~rMla~aA~~lG~~v~v~d~~~~~PA~~--va~~~i~~~~~d~~~l~~~~~~~~~DviT~ 80 (111)
T d1kjqa2 10 AATRVMLLGSGELGKEVAIECQRLGVEVIAVDRYADAPAMH--VAHRSHVINMLDGDALRRVVELEKPHYIVP 80 (111)
T ss_dssp TCCEEEEESCSHHHHHHHHHHHTTTCEEEEEESSTTCGGGG--GSSEEEECCTTCHHHHHHHHHHHCCSEEEE
T ss_pred CCCEEEEEeCCHHHHHHHHHHHHCCCEEEEEcCCCCCchhh--cCCeEEECCCCCHHHHHHHHHhhCCceEEE
Confidence 34689999999999999999999999999999876644321 233678899999774 222 34677754
|
| >d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamyl tRNA-reductase middle domain species: Archaeon Methanopyrus kandleri [TaxId: 2320]
Probab=97.45 E-value=6.6e-05 Score=57.29 Aligned_cols=71 Identities=17% Similarity=0.176 Sum_probs=54.0
Q ss_pred CCCCCeEEEEcCChhhHHHHHHHHhCCC-EEEEEEeCchhhhhhhh-CCceEEEccCChhhHHhhccCceeeEEEE
Q 017914 56 WQSPNRMLILGMGFVGRIFAEKIKNQGW-VVSGTCTNVMKKKELEQ-SGFDVHLFNANETALMILTTLKNYTHLLV 129 (364)
Q Consensus 56 ~~~~~~vlVtGtG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~l~~-~~~~~~~~D~~~~~~~~~~~~d~v~~~~~ 129 (364)
...+++|||+|+|-+|+.+++.|...|. ++++..|+.++...+.. .+... .++.+.. ..+..+|+|+.+.+
T Consensus 21 ~l~~~~ilviGaG~~g~~v~~~L~~~g~~~i~v~nRt~~ka~~l~~~~~~~~--~~~~~~~-~~l~~~Divi~ats 93 (159)
T d1gpja2 21 SLHDKTVLVVGAGEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLGGEA--VRFDELV-DHLARSDVVVSATA 93 (159)
T ss_dssp CCTTCEEEEESCCHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHTCEE--CCGGGHH-HHHHTCSEEEECCS
T ss_pred CcccCeEEEECCCHHHHHHHHHHHhcCCcEEEEEcCcHHHHHHHHHhhhccc--ccchhHH-HHhccCCEEEEecC
Confidence 4567899999999999999999999997 79999999887766543 23333 2333322 57789999998764
|
| >d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Siroheme synthase N-terminal domain-like domain: Siroheme synthase CysG, domain 1 species: Salmonella typhimurium [TaxId: 90371]
Probab=97.43 E-value=0.00061 Score=48.50 Aligned_cols=93 Identities=12% Similarity=-0.017 Sum_probs=62.2
Q ss_pred CCCCCeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCchhhh--hhhhCCceEEEccCChhhHHhhccCceeeEEEEecCC
Q 017914 56 WQSPNRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMKKK--ELEQSGFDVHLFNANETALMILTTLKNYTHLLVSIPP 133 (364)
Q Consensus 56 ~~~~~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~~~~--~l~~~~~~~~~~D~~~~~~~~~~~~d~v~~~~~~~~~ 133 (364)
...+++|||+|+|.+|..-++.|++.|.+|++++....... .....+++++..++.+. .+.+++.|+...
T Consensus 9 ~l~~k~vlVvG~G~va~~ka~~ll~~ga~v~v~~~~~~~~~~~~~~~~~i~~~~~~~~~~---dl~~~~lv~~at----- 80 (113)
T d1pjqa1 9 QLRDRDCLIVGGGDVAERKARLLLEAGARLTVNALTFIPQFTVWANEGMLTLVEGPFDET---LLDSCWLAIAAT----- 80 (113)
T ss_dssp CCBTCEEEEECCSHHHHHHHHHHHHTTBEEEEEESSCCHHHHHHHTTTSCEEEESSCCGG---GGTTCSEEEECC-----
T ss_pred EeCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeccCChHHHHHHhcCCceeeccCCCHH---HhCCCcEEeecC-----
Confidence 45678999999999999999999999999999987544322 22335677777666653 345555554332
Q ss_pred CCCCCChhhhHHHHHHHHhhcCCccEEEEEc
Q 017914 134 LEGTGDPMLKHGELLRSTLMNGHLQWLGYLS 164 (364)
Q Consensus 134 ~~~~~~~~~~~~~~l~~a~~~~~~~r~v~~S 164 (364)
.+ ......+...+++.+ .+|.+.
T Consensus 81 ----~d--~~~n~~i~~~a~~~~--ilVNv~ 103 (113)
T d1pjqa1 81 ----DD--DTVNQRVSDAAESRR--IFCNVV 103 (113)
T ss_dssp ----SC--HHHHHHHHHHHHHTT--CEEEET
T ss_pred ----CC--HHHHHHHHHHHHHcC--CEEEeC
Confidence 12 233456666777766 366654
|
| >d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Potassium channel-related protein MthK species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]
Probab=97.42 E-value=8.2e-05 Score=54.67 Aligned_cols=67 Identities=12% Similarity=0.025 Sum_probs=54.3
Q ss_pred CeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCChhhH---HhhccCceeeEEE
Q 017914 60 NRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETAL---MILTTLKNYTHLL 128 (364)
Q Consensus 60 ~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~---~~~~~~d~v~~~~ 128 (364)
++|+|+|-|-+|+.+++.|. |++|+++..+++....+...++.++.||.++++. ..+..++.++-+.
T Consensus 1 kHivI~G~g~~g~~l~~~L~--~~~i~vi~~d~~~~~~~~~~~~~~i~Gd~~~~~~L~~a~i~~A~~vi~~~ 70 (129)
T d2fy8a1 1 RHVVICGWSESTLECLRELR--GSEVFVLAEDENVRKKVLRSGANFVHGDPTRVSDLEKANVRGARAVIVNL 70 (129)
T ss_dssp CCEEEESCCHHHHHHHHTSC--GGGEEEEESCTTHHHHHHHTTCEEEESCTTSHHHHHHTTCTTCSEEEECC
T ss_pred CEEEEECCCHHHHHHHHHHc--CCCCEEEEcchHHHHHHHhcCccccccccCCHHHHHHhhhhcCcEEEEec
Confidence 47899999999999999984 6678889998888777777899999999999884 3346666666543
|
| >d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Prephenate dehydrogenase TyrA species: Haemophilus influenzae [TaxId: 727]
Probab=97.39 E-value=0.00015 Score=54.92 Aligned_cols=40 Identities=20% Similarity=0.346 Sum_probs=35.4
Q ss_pred CCCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhh
Q 017914 56 WQSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKK 95 (364)
Q Consensus 56 ~~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~ 95 (364)
+..+++|.|+| .|.+|+.+++.|.++||+|.+.+|+....
T Consensus 6 ~~~~~kI~iIGg~G~mG~~la~~L~~~G~~V~~~d~~~~~~ 46 (152)
T d2pv7a2 6 NSDIHKIVIVGGYGKLGGLFARYLRASGYPISILDREDWAV 46 (152)
T ss_dssp CTTCCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCGGG
T ss_pred CCCCCeEEEEcCCCHHHHHHHHHHHHcCCCcEecccccccc
Confidence 45678999999 89999999999999999999999976543
|
| >d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Thermus thermophilus [TaxId: 274]
Probab=97.39 E-value=0.00017 Score=55.72 Aligned_cols=71 Identities=13% Similarity=0.055 Sum_probs=54.8
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCChhhH--HhhccCceeeEEE
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETAL--MILTTLKNYTHLL 128 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~--~~~~~~d~v~~~~ 128 (364)
..+.+|||+| +|.+|...++.+...|.+|++.++++++.+.+.+.+++.+ .|..+... ....++|.|+.++
T Consensus 26 ~~g~~VlI~ga~G~vG~~aiqlak~~G~~vi~~~~~~~~~~~~~~lGa~~~-i~~~~~~~~~~~~~g~D~v~d~~ 99 (171)
T d1iz0a2 26 RPGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPLALGAEEA-ATYAEVPERAKAWGGLDLVLEVR 99 (171)
T ss_dssp CTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHHHTTCSEE-EEGGGHHHHHHHTTSEEEEEECS
T ss_pred CCCCEEEEEeccccchhhhhhhhccccccccccccccccccccccccccee-eehhhhhhhhhcccccccccccc
Confidence 4567999999 8999999999999999999999999888777777776544 35544222 4456788888754
|
| >d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Cinnamyl alcohol dehydrogenase, ADH6 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=97.38 E-value=0.00012 Score=56.46 Aligned_cols=72 Identities=15% Similarity=0.093 Sum_probs=52.9
Q ss_pred CCCCeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCC-hhhH--HhhccCceeeEEEE
Q 017914 57 QSPNRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNAN-ETAL--MILTTLKNYTHLLV 129 (364)
Q Consensus 57 ~~~~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~-~~~~--~~~~~~d~v~~~~~ 129 (364)
..+.+|+|+|+|.+|...++.+...|.+|+++++++++.+...+.+.+.+. |.. +.++ .....+|.++.+.+
T Consensus 26 ~~g~~vlI~GaG~vG~~a~q~ak~~G~~vi~~~~~~~k~~~a~~lGa~~~i-~~~~~~~~~~~~~~~~d~vi~~~~ 100 (168)
T d1piwa2 26 GPGKKVGIVGLGGIGSMGTLISKAMGAETYVISRSSRKREDAMKMGADHYI-ATLEEGDWGEKYFDTFDLIVVCAS 100 (168)
T ss_dssp STTCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHHHTCSEEE-EGGGTSCHHHHSCSCEEEEEECCS
T ss_pred CCCCEEEEECCCCcchhHHHHhhhccccccccccchhHHHHhhccCCcEEe-eccchHHHHHhhhcccceEEEEec
Confidence 456799999999999999988888899999999998888777666665332 322 2333 33456787777654
|
| >d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Prephenate dehydrogenase TyrA species: Aquifex aeolicus [TaxId: 63363]
Probab=97.36 E-value=0.00018 Score=55.54 Aligned_cols=67 Identities=19% Similarity=0.238 Sum_probs=46.2
Q ss_pred CCeEEEEcCChhhHHHHHHHHhCCC--EEEEEEeCchhhhhhhhCCc-eEEEccCChhhHHhhccCceeeEEE
Q 017914 59 PNRMLILGMGFVGRIFAEKIKNQGW--VVSGTCTNVMKKKELEQSGF-DVHLFNANETALMILTTLKNYTHLL 128 (364)
Q Consensus 59 ~~~vlVtGtG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~l~~~~~-~~~~~D~~~~~~~~~~~~d~v~~~~ 128 (364)
|++|+|+|.|.+|..+++.|.+.|+ +|++.+|+++..+.....+. .....+... ......|.|+.+.
T Consensus 1 Mk~I~IIG~G~mG~sla~~L~~~g~~~~I~~~D~~~~~~~~a~~~~~~~~~~~~~~~---~~~~~~dlIila~ 70 (171)
T d2g5ca2 1 MQNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTSIAK---VEDFSPDFVMLSS 70 (171)
T ss_dssp CCEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEESCGGG---GGGTCCSEEEECS
T ss_pred CCEEEEEccCHHHHHHHHHHHhcCCCeEEEEEECChHHHHHHHHhhcchhhhhhhhh---hhccccccccccC
Confidence 5689999999999999999999985 79999998877666554443 122222111 2334567666544
|
| >d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Conserved hypothetical protein MTH1747 species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]
Probab=97.35 E-value=0.00022 Score=53.96 Aligned_cols=64 Identities=13% Similarity=0.098 Sum_probs=47.0
Q ss_pred CeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCChhhHHhhccCceeeEEE
Q 017914 60 NRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETALMILTTLKNYTHLL 128 (364)
Q Consensus 60 ~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~~~~~~~d~v~~~~ 128 (364)
|||-|+|.|.+|+.+++.|+++||+|++.++.+.+.......++.+. .+ .+ +..+.+|.|+-+.
T Consensus 1 MkIgiIG~G~mG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~-~~---~~-e~~~~~diIi~~v 64 (152)
T d1i36a2 1 LRVGFIGFGEVAQTLASRLRSRGVEVVTSLEGRSPSTIERARTVGVT-ET---SE-EDVYSCPVVISAV 64 (152)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCEEEECCTTCCHHHHHHHHHHTCE-EC---CH-HHHHTSSEEEECS
T ss_pred CEEEEEcHHHHHHHHHHHHHHCCCeEEEEcCchhHHHHHhhhccccc-cc---HH-HHHhhcCeEEEEe
Confidence 78999999999999999999999999999887665544332232221 11 11 5677889888765
|
| >d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YhdH species: Escherichia coli [TaxId: 562]
Probab=97.32 E-value=9.6e-05 Score=48.48 Aligned_cols=43 Identities=16% Similarity=0.259 Sum_probs=37.5
Q ss_pred CCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhh
Q 017914 58 SPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQ 100 (364)
Q Consensus 58 ~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~ 100 (364)
.+.+|||+| +|.+|...++.+...|++|++.++++++.+.+.+
T Consensus 31 ~~~~vlI~gasGgVG~~aiQlak~~G~~Vi~~t~s~~k~~~~~~ 74 (77)
T d1o8ca2 31 QDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEYLKS 74 (77)
T ss_dssp GGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHHH
T ss_pred CCCcEEEEeCCCcHHHHHHHHHHHcCCeEEEEECCHHHHHHHHH
Confidence 457899998 9999999999999999999999999888766543
|
| >d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Ketose reductase (sorbitol dehydrogenase) species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]
Probab=97.31 E-value=0.00067 Score=52.10 Aligned_cols=95 Identities=16% Similarity=0.072 Sum_probs=64.0
Q ss_pred CCCCeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceE-EEccCChhhH----Hhh-----ccCceeeE
Q 017914 57 QSPNRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDV-HLFNANETAL----MIL-----TTLKNYTH 126 (364)
Q Consensus 57 ~~~~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~-~~~D~~~~~~----~~~-----~~~d~v~~ 126 (364)
..+.+|+|+|+|.+|...++.+...|.+|+++++++.+.+...+.+... +..|-.+.+. ..+ .++|.|+.
T Consensus 25 ~~g~~vlV~G~G~vG~~~~~~ak~~Ga~vi~v~~~~~r~~~a~~~ga~~~~~~~~~~~~~~~~~~~~~~~~g~g~D~vid 104 (170)
T d1e3ja2 25 QLGTTVLVIGAGPIGLVSVLAAKAYGAFVVCTARSPRRLEVAKNCGADVTLVVDPAKEEESSIIERIRSAIGDLPNVTID 104 (170)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTCSEEEECCTTTSCHHHHHHHHHHHSSSCCSEEEE
T ss_pred CCCCEEEEEcccccchhhHhhHhhhcccccccchHHHHHHHHHHcCCcEEEeccccccccchhhhhhhcccccCCceeee
Confidence 4457899999999999999999999999999999998887766656543 3333332211 222 35788888
Q ss_pred EEEecCCCCCCCChhhhHHHHHHHHhhcCCccEEEEEc
Q 017914 127 LLVSIPPLEGTGDPMLKHGELLRSTLMNGHLQWLGYLS 164 (364)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~r~v~~S 164 (364)
+++. .......++.++..| ++++++
T Consensus 105 ~~g~-----------~~~~~~a~~~~~~~G--~iv~~G 129 (170)
T d1e3ja2 105 CSGN-----------EKCITIGINITRTGG--TLMLVG 129 (170)
T ss_dssp CSCC-----------HHHHHHHHHHSCTTC--EEEECS
T ss_pred cCCC-----------hHHHHHHHHHHhcCC--ceEEEe
Confidence 7642 122334455555555 788765
|
| >d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: B. subtilis YhfP homologue species: Bacillus stearothermophilus [TaxId: 1422]
Probab=97.31 E-value=0.00013 Score=56.51 Aligned_cols=93 Identities=15% Similarity=0.148 Sum_probs=62.2
Q ss_pred CCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCChhhH---Hhh--ccCceeeEEEEecC
Q 017914 59 PNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETAL---MIL--TTLKNYTHLLVSIP 132 (364)
Q Consensus 59 ~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~---~~~--~~~d~v~~~~~~~~ 132 (364)
+.+|||.| +|.+|...++.+...|.+|++.++++++.+...+.+.+.+. |..+... ... .++|.|+..++.
T Consensus 32 g~~VLI~gaaGGVG~~aiQlak~~Ga~Viat~~s~~k~~~~~~lGa~~vi-~~~~~~~~~~~~~~~~gvD~vid~vgg-- 108 (176)
T d1xa0a2 32 RGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLRVLGAKEVL-AREDVMAERIRPLDKQRWAAAVDPVGG-- 108 (176)
T ss_dssp GCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHHHTTCSEEE-ECC---------CCSCCEEEEEECSTT--
T ss_pred CCEEEEEeccchHHHHHHHHHHHcCCceEEecCchHHHHHHHhcccceee-ecchhHHHHHHHhhccCcCEEEEcCCc--
Confidence 56899999 99999999999999999999999999888877776765433 4443221 111 356666665431
Q ss_pred CCCCCCChhhhHHHHHHHHhhcCCccEEEEEccc
Q 017914 133 PLEGTGDPMLKHGELLRSTLMNGHLQWLGYLSST 166 (364)
Q Consensus 133 ~~~~~~~~~~~~~~~l~~a~~~~~~~r~v~~Ss~ 166 (364)
......+..++..| |+|.++..
T Consensus 109 ----------~~~~~~l~~l~~~G--riv~~G~~ 130 (176)
T d1xa0a2 109 ----------RTLATVLSRMRYGG--AVAVSGLT 130 (176)
T ss_dssp ----------TTHHHHHHTEEEEE--EEEECSCC
T ss_pred ----------hhHHHHHHHhCCCc--eEEEeecc
Confidence 12334455566554 88877654
|
| >d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Pyrroline-5-carboxylate reductase ProC species: Neisseria meningitidis, serogroup B [TaxId: 487]
Probab=97.29 E-value=0.00015 Score=54.92 Aligned_cols=63 Identities=17% Similarity=0.176 Sum_probs=47.4
Q ss_pred CeEEEEcCChhhHHHHHHHHhCC-CEEEEEEeCchhhhhhhh-CCceEEEccCChhhHHhhccCceeeEEE
Q 017914 60 NRMLILGMGFVGRIFAEKIKNQG-WVVSGTCTNVMKKKELEQ-SGFDVHLFNANETALMILTTLKNYTHLL 128 (364)
Q Consensus 60 ~~vlVtGtG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~l~~-~~~~~~~~D~~~~~~~~~~~~d~v~~~~ 128 (364)
|+|.++|+|.+|+++++.|++.| ++|++.+|++++.+.+.+ .++... -|. ..+...|.|+.+.
T Consensus 1 MkI~fIG~G~MG~ai~~~l~~~~~~~i~v~~r~~~~~~~l~~~~~~~~~-~~~-----~~v~~~Div~lav 65 (152)
T d1yqga2 1 MNVYFLGGGNMAAAVAGGLVKQGGYRIYIANRGAEKRERLEKELGVETS-ATL-----PELHSDDVLILAV 65 (152)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSCEEEEECSSHHHHHHHHHHTCCEEE-SSC-----CCCCTTSEEEECS
T ss_pred CEEEEEcCcHHHHHHHHHHHHCCCCcEEEEeCChhHHHHhhhhcccccc-ccc-----ccccccceEEEec
Confidence 78999999999999999998887 999999999988777754 344432 111 2355678777543
|
| >d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: MurCD N-terminal domain superfamily: MurCD N-terminal domain family: MurCD N-terminal domain domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD species: Escherichia coli [TaxId: 562]
Probab=97.24 E-value=0.00045 Score=47.30 Aligned_cols=66 Identities=15% Similarity=0.166 Sum_probs=46.4
Q ss_pred CCCCeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCchhh--hhhhhCCceEEEccCChhhHHhhccCceeeE
Q 017914 57 QSPNRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMKK--KELEQSGFDVHLFNANETALMILTTLKNYTH 126 (364)
Q Consensus 57 ~~~~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~~~--~~l~~~~~~~~~~D~~~~~~~~~~~~d~v~~ 126 (364)
..+++|+|+|-|-.|..+++.|.++|++|++.+.+.... ..+. .++.++.+...+ ..+.++|.|+.
T Consensus 3 ~~~K~v~ViGlG~sG~s~a~~L~~~g~~v~~~D~~~~~~~~~~~~-~~~~~~~~~~~~---~~~~~~d~vi~ 70 (93)
T d2jfga1 3 YQGKNVVIIGLGLTGLSCVDFFLARGVTPRVMDTRMTPPGLDKLP-EAVERHTGSLND---EWLMAADLIVA 70 (93)
T ss_dssp CTTCCEEEECCSHHHHHHHHHHHHTTCCCEEEESSSSCTTGGGSC-TTSCEEESBCCH---HHHHHCSEEEE
T ss_pred cCCCEEEEEeECHHHHHHHHHHHHCCCEEEEeeCCcCchhHHHHh-hccceeecccch---hhhccCCEEEE
Confidence 457899999999999999999999999999999865432 2222 345555554332 33456666665
|
| >d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Glycerol-3- phosphate dehydrogenase species: Trypanosome (Leishmania mexicana) [TaxId: 5665]
Probab=97.23 E-value=0.00016 Score=56.90 Aligned_cols=43 Identities=16% Similarity=0.152 Sum_probs=37.3
Q ss_pred CCCCeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCchhhhhhh
Q 017914 57 QSPNRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELE 99 (364)
Q Consensus 57 ~~~~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~ 99 (364)
+.|++|.|+|+|..|.+++..|.+.||+|++.+|+++..+.+.
T Consensus 5 ~~m~KI~ViGaG~wGtAlA~~La~~g~~V~l~~r~~~~~~~i~ 47 (189)
T d1n1ea2 5 LYLNKAVVFGSGAFGTALAMVLSKKCREVCVWHMNEEEVRLVN 47 (189)
T ss_dssp CCEEEEEEECCSHHHHHHHHHHHTTEEEEEEECSCHHHHHHHH
T ss_pred ceeceEEEECCCHHHHHHHHHHHHcCCeEEEEEecHHHHHHHh
Confidence 4456899999999999999999999999999999887665553
|
| >d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YhdH species: Escherichia coli [TaxId: 562]
Probab=97.21 E-value=0.00015 Score=56.35 Aligned_cols=92 Identities=14% Similarity=0.099 Sum_probs=62.5
Q ss_pred CeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCChhhH-Hhh--ccCceeeEEEEecCCCC
Q 017914 60 NRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETAL-MIL--TTLKNYTHLLVSIPPLE 135 (364)
Q Consensus 60 ~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~-~~~--~~~d~v~~~~~~~~~~~ 135 (364)
.+|||+| +|.+|...++.+...|.+|++++|++++.+.+.+.+.+.+ .|..+.++ +.+ ...|.++.+++.
T Consensus 33 ~~vlV~gasGGVG~~aiQlAk~~Ga~Via~~~~~~k~~~~~~lGad~v-i~~~~~~~~~~l~~~~~~~vvD~Vgg----- 106 (177)
T d1o89a2 33 GEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEYLKSLGASRV-LPRDEFAESRPLEKQVWAGAIDTVGD----- 106 (177)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHHHHTEEEE-EEGGGSSSCCSSCCCCEEEEEESSCH-----
T ss_pred CcEEEEEccccchHHHHHHHHHcCCCeEEEecchhHHHHHHhhccccc-cccccHHHHHHHHhhcCCeeEEEcch-----
Confidence 4799998 9999999999999999999999999998887777676654 35444433 223 234666655421
Q ss_pred CCCChhhhHHHHHHHHhhcCCccEEEEEccc
Q 017914 136 GTGDPMLKHGELLRSTLMNGHLQWLGYLSST 166 (364)
Q Consensus 136 ~~~~~~~~~~~~l~~a~~~~~~~r~v~~Ss~ 166 (364)
......+..++..| |+|.++..
T Consensus 107 -------~~~~~~l~~l~~~G--riv~~G~~ 128 (177)
T d1o89a2 107 -------KVLAKVLAQMNYGG--CVAACGLA 128 (177)
T ss_dssp -------HHHHHHHHTEEEEE--EEEECCCT
T ss_pred -------HHHHHHHHHhcccc--ceEeeccc
Confidence 12334445555544 78876543
|
| >d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YhfP species: Bacillus subtilis [TaxId: 1423]
Probab=97.20 E-value=8.8e-05 Score=57.11 Aligned_cols=92 Identities=18% Similarity=0.148 Sum_probs=61.4
Q ss_pred CCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCChhhHHhh-----ccCceeeEEEEecC
Q 017914 59 PNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETALMIL-----TTLKNYTHLLVSIP 132 (364)
Q Consensus 59 ~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~~~~-----~~~d~v~~~~~~~~ 132 (364)
+.+|||+| +|.+|...++.....|.+|++.++++++.+.+.+.+.+.+ .|..+...... .++|.|+..++.
T Consensus 24 ~~~VLV~gaaGgVG~~avQlAk~~Ga~Viat~~s~~k~~~~~~lGad~v-i~~~~~~~~~~~~~~~~gvd~vid~vgg-- 100 (167)
T d1tt7a2 24 KGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYLKQLGASEV-ISREDVYDGTLKALSKQQWQGAVDPVGG-- 100 (167)
T ss_dssp GCCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHHHHHTCSEE-EEHHHHCSSCCCSSCCCCEEEEEESCCT--
T ss_pred CCEEEEeCCcchHHHHHHHHHHHcCCceEEEecCHHHHHHHHhhcccce-EeccchhchhhhcccCCCceEEEecCcH--
Confidence 34799998 9999999999999999999999999998888877776654 24333221111 346666665431
Q ss_pred CCCCCCChhhhHHHHHHHHhhcCCccEEEEEcc
Q 017914 133 PLEGTGDPMLKHGELLRSTLMNGHLQWLGYLSS 165 (364)
Q Consensus 133 ~~~~~~~~~~~~~~~l~~a~~~~~~~r~v~~Ss 165 (364)
......+..++..| |+|.++.
T Consensus 101 ----------~~~~~~~~~l~~~G--~iv~~G~ 121 (167)
T d1tt7a2 101 ----------KQLASLLSKIQYGG--SVAVSGL 121 (167)
T ss_dssp ----------HHHHHHHTTEEEEE--EEEECCC
T ss_pred ----------HHHHHHHHHhccCc--eEEEeec
Confidence 12234455555544 6776543
|
| >d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YahK species: Escherichia coli [TaxId: 562]
Probab=97.19 E-value=0.00037 Score=53.55 Aligned_cols=73 Identities=15% Similarity=0.143 Sum_probs=54.7
Q ss_pred CCCCCeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCChhhH--HhhccCceeeEEEE
Q 017914 56 WQSPNRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETAL--MILTTLKNYTHLLV 129 (364)
Q Consensus 56 ~~~~~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~--~~~~~~d~v~~~~~ 129 (364)
...+.+|+|.|+|.+|...++.+...|.++++++++.++.+...+.+...+ .|..+.+. ...+++|.++.+++
T Consensus 28 ~~~G~~VlI~GaG~vG~~a~qlak~~Ga~~i~~~~~~~~~~~a~~lGad~~-i~~~~~~~~~~~~~~~D~vid~~g 102 (168)
T d1uufa2 28 AGPGKKVGVVGIGGLGHMGIKLAHAMGAHVVAFTTSEAKREAAKALGADEV-VNSRNADEMAAHLKSFDFILNTVA 102 (168)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHTCSEE-EETTCHHHHHTTTTCEEEEEECCS
T ss_pred CCCCCEEEEeccchHHHHHHHHhhcccccchhhccchhHHHHHhccCCcEE-EECchhhHHHHhcCCCceeeeeee
Confidence 345689999999999999999999999999999998887766665565533 35555442 44467888877764
|
| >d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Pyrroline-5-carboxylate reductase ProC species: Streptococcus pyogenes [TaxId: 1314]
Probab=97.18 E-value=8.7e-05 Score=56.25 Aligned_cols=64 Identities=9% Similarity=0.127 Sum_probs=48.8
Q ss_pred CeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhh-CCceEEEccCChhhHHhhccCceeeEEE
Q 017914 60 NRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQ-SGFDVHLFNANETALMILTTLKNYTHLL 128 (364)
Q Consensus 60 ~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~-~~~~~~~~D~~~~~~~~~~~~d~v~~~~ 128 (364)
|||.++|+|.+|+++++.|.+.|++|++..|+.++...+.+ .++.+. .+.+ +..+..|.|+-++
T Consensus 1 MkIg~IG~G~mG~al~~~l~~~~~~i~v~~r~~~~~~~l~~~~g~~~~----~~~~-~~~~~~dvIilav 65 (152)
T d2ahra2 1 MKIGIIGVGKMASAIIKGLKQTPHELIISGSSLERSKEIAEQLALPYA----MSHQ-DLIDQVDLVILGI 65 (152)
T ss_dssp CEEEEECCSHHHHHHHHHHTTSSCEEEEECSSHHHHHHHHHHHTCCBC----SSHH-HHHHTCSEEEECS
T ss_pred CEEEEEeccHHHHHHHHHHHhCCCeEEEEcChHHhHHhhccccceeee----chhh-hhhhccceeeeec
Confidence 78999999999999999999999999999999887766542 243321 1222 5677889887654
|
| >d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Pig (Sus scrofa) [TaxId: 9823]
Probab=97.17 E-value=0.0021 Score=47.70 Aligned_cols=104 Identities=11% Similarity=-0.072 Sum_probs=60.1
Q ss_pred eEEEEc-CChhhHHHHHHHHhCCC--EEEEEEeCchhhhhhh--hC-CceEEEccCChhhH-HhhccCceeeEEEEecCC
Q 017914 61 RMLILG-MGFVGRIFAEKIKNQGW--VVSGTCTNVMKKKELE--QS-GFDVHLFNANETAL-MILTTLKNYTHLLVSIPP 133 (364)
Q Consensus 61 ~vlVtG-tG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~l~--~~-~~~~~~~D~~~~~~-~~~~~~d~v~~~~~~~~~ 133 (364)
||.|+| +|.+|+.++-.|..+|. ++++++.+..+...+. .. .......-+...+. +.++++|+|+..++....
T Consensus 2 Kv~IiGA~G~VG~~~A~~l~~~~~~~elvLiDi~~~~~~a~Dl~~~~~~~~~~~~~~~~~~~~~~~~aDivVitag~~~~ 81 (144)
T d1mlda1 2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVAADLSHIETRATVKGYLGPEQLPDCLKGCDVVVIPAGVPRK 81 (144)
T ss_dssp EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHHHHHHHTTSSSSCEEEEEESGGGHHHHHTTCSEEEECCSCCCC
T ss_pred eEEEECCCChHHHHHHHHHHhCCccceEEEEeccccchhhHHHhhhhhhcCCCeEEcCCChHHHhCCCCEEEECCCcCCC
Confidence 799999 79999999999998874 7888888655433221 11 11122222222332 678999999998875332
Q ss_pred CCCCCChhh----hHHHHHHHHhhcCCccEEEEEc
Q 017914 134 LEGTGDPML----KHGELLRSTLMNGHLQWLGYLS 164 (364)
Q Consensus 134 ~~~~~~~~~----~~~~~l~~a~~~~~~~r~v~~S 164 (364)
....+.... ...+.+...+.+.+.+.++.+-
T Consensus 82 ~g~sR~~ll~~N~~i~~~i~~~i~~~~p~~iiivv 116 (144)
T d1mlda1 82 PGMTRDDLFNTNATIVATLTAACAQHCPDAMICII 116 (144)
T ss_dssp TTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEEC
T ss_pred CCCCcchHHHHHHHHHHHHHHHHHhcCCCeEEEEe
Confidence 211111111 2223455555555555555443
|
| >d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: 6-phosphogluconate dehydrogenase species: Sheep (Ovis orientalis aries) [TaxId: 9940]
Probab=97.12 E-value=0.00069 Score=52.41 Aligned_cols=69 Identities=14% Similarity=0.223 Sum_probs=48.4
Q ss_pred CeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCce--EEEccCChhhH-HhhccCceeeEEE
Q 017914 60 NRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFD--VHLFNANETAL-MILTTLKNYTHLL 128 (364)
Q Consensus 60 ~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~--~~~~D~~~~~~-~~~~~~d~v~~~~ 128 (364)
.+|-|+|.|.+|..+++.|+++||+|++.+|++++.+.+...+.. ...+-..-.+. ......|.++-+.
T Consensus 3 ~nIg~IGlG~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~ii~~~ 74 (176)
T d2pgda2 3 ADIALIGLAVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLANEAKGTKVLGAHSLEEMVSKLKKPRRIILLV 74 (176)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSSTHHHHHHHHTTTTTSSCEECSSHHHHHHHBCSSCEEEECS
T ss_pred CcEEEEeEhHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHhccccccccchhhhhhhhhhhcccceEEEec
Confidence 579999999999999999999999999999999888776543321 11111111122 4556667666654
|
| >d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein TM0436 species: Thermotoga maritima [TaxId: 2336]
Probab=97.09 E-value=0.00062 Score=53.01 Aligned_cols=94 Identities=16% Similarity=0.057 Sum_probs=62.2
Q ss_pred CCCCeEEEEcCChhhHHHHHHHHhCCC-EEEEEEeCchhhhhhhhCCceEEEccCChhh---H-Hhh------ccCceee
Q 017914 57 QSPNRMLILGMGFVGRIFAEKIKNQGW-VVSGTCTNVMKKKELEQSGFDVHLFNANETA---L-MIL------TTLKNYT 125 (364)
Q Consensus 57 ~~~~~vlVtGtG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~---~-~~~------~~~d~v~ 125 (364)
..+.+|||+|+|.+|...++.+...|. +|+++++++++.+...+.+...+ .|..+.+ . +.+ .++|.|+
T Consensus 27 ~~G~~VlV~GaG~iG~~~~~~ak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~v-i~~~~~~~~~~~~~i~~~~~~~g~Dvvi 105 (182)
T d1vj0a2 27 FAGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEEIGADLT-LNRRETSVEERRKAIMDITHGRGADFIL 105 (182)
T ss_dssp CBTCEEEEECCSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHHHTTCSEE-EETTTSCHHHHHHHHHHHTTTSCEEEEE
T ss_pred CCCCEEEEECCCccchhheecccccccccccccccccccccccccccceEE-EeccccchHHHHHHHHHhhCCCCceEEe
Confidence 346799999999999999999999997 89999999988877766666433 2333322 1 111 2477777
Q ss_pred EEEEecCCCCCCCChhhhHHHHHHHHhhcCCccEEEEEc
Q 017914 126 HLLVSIPPLEGTGDPMLKHGELLRSTLMNGHLQWLGYLS 164 (364)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~r~v~~S 164 (364)
.+++. . .........++..| +++.++
T Consensus 106 d~vG~-------~----~~~~~a~~~l~~~G--~iv~~G 131 (182)
T d1vj0a2 106 EATGD-------S----RALLEGSELLRRGG--FYSVAG 131 (182)
T ss_dssp ECSSC-------T----THHHHHHHHEEEEE--EEEECC
T ss_pred ecCCc-------h----hHHHHHHHHhcCCC--EEEEEe
Confidence 76532 1 12234455555544 677665
|
| >d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=97.07 E-value=0.0025 Score=47.49 Aligned_cols=70 Identities=17% Similarity=0.127 Sum_probs=49.4
Q ss_pred CCCCeEEEEcCChhhHHHHHHHHhCCC--EEEEEEeCchhhhh----hhh------CCceEEEccCChhhHHhhccCcee
Q 017914 57 QSPNRMLILGMGFVGRIFAEKIKNQGW--VVSGTCTNVMKKKE----LEQ------SGFDVHLFNANETALMILTTLKNY 124 (364)
Q Consensus 57 ~~~~~vlVtGtG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~----l~~------~~~~~~~~D~~~~~~~~~~~~d~v 124 (364)
..++||.|+|+|.+|+.++..|..+|. ++.+++++++.... +.+ ..+.+...|. +.+.++|.|
T Consensus 4 ~~~~KI~IiGaG~vG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~~~~~d~-----~~l~daDvv 78 (148)
T d1ldna1 4 NGGARVVVIGAGFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWHGDY-----DDCRDADLV 78 (148)
T ss_dssp TTSCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEECCG-----GGTTTCSEE
T ss_pred CCCCeEEEECcCHHHHHHHHHHHhcCCCceEEEEeeccccccchhccHhhCccccCCCeEEEECCH-----HHhccceeE
Confidence 445799999999999999999999874 89999987765322 111 1223333332 467889999
Q ss_pred eEEEEec
Q 017914 125 THLLVSI 131 (364)
Q Consensus 125 ~~~~~~~ 131 (364)
+..++..
T Consensus 79 vitag~~ 85 (148)
T d1ldna1 79 VICAGAN 85 (148)
T ss_dssp EECCSCC
T ss_pred EEecccc
Confidence 9887653
|
| >d1mb4a1 c.2.1.3 (A:1-132,A:355-369) Aspartate beta-semialdehyde dehydrogenase {Vibrio cholerae [TaxId: 666]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Aspartate beta-semialdehyde dehydrogenase species: Vibrio cholerae [TaxId: 666]
Probab=97.07 E-value=0.00089 Score=49.79 Aligned_cols=93 Identities=15% Similarity=0.066 Sum_probs=49.5
Q ss_pred CeEEEEc-CChhhHHHHHHHHhCC----CEEEEEEeCchhhhhhhhCCceEEEccCChhhHHhhccCceeeEEEEecCCC
Q 017914 60 NRMLILG-MGFVGRIFAEKIKNQG----WVVSGTCTNVMKKKELEQSGFDVHLFNANETALMILTTLKNYTHLLVSIPPL 134 (364)
Q Consensus 60 ~~vlVtG-tG~iG~~l~~~L~~~g----~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~~~~~~~d~v~~~~~~~~~~ 134 (364)
|||.|+| ||++|+.|++.|+++. .++..++.+..........+-.....+..+ ...+.++|.|+.+..
T Consensus 1 mKVaIiGATGyvG~eLi~lLl~~~~~p~~~i~~~ss~~~~gk~~~~~~~~~~~~~~~~--~~~~~~~DvvF~alp----- 73 (147)
T d1mb4a1 1 MRVGLVGWRGMVGSVLMQRMVEERDFDLIEPVFFSTSQIGVPAPNFGKDAGMLHDAFD--IESLKQLDAVITCQG----- 73 (147)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTGGGGSEEEEEESSCCSSBCCCSSSCCCBCEETTC--HHHHTTCSEEEECSC-----
T ss_pred CEEEEECCccHHHHHHHHHHHhcCCCCceEEEEeccccccccccccCCcceeeecccc--hhhhccccEEEEecC-----
Confidence 6899999 9999999999888753 366655543222111110010000011111 145678888887652
Q ss_pred CCCCChhhhHHHHHHHHhhcCCcc-EEEEEccc
Q 017914 135 EGTGDPMLKHGELLRSTLMNGHLQ-WLGYLSST 166 (364)
Q Consensus 135 ~~~~~~~~~~~~~l~~a~~~~~~~-r~v~~Ss~ 166 (364)
. .....+...+.+.|.+ .+|=.|+.
T Consensus 74 ------~-~~s~~~~~~l~~~g~~~~VIDlSsd 99 (147)
T d1mb4a1 74 ------G-SYTEKVYPALRQAGWKGYWIDAAST 99 (147)
T ss_dssp ------H-HHHHHHHHHHHHTTCCSEEEESSST
T ss_pred ------c-hHHHHHhHHHHHcCCceEEEeCCcc
Confidence 1 1233444555556665 35545653
|
| >d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Short chain L-3-hydroxyacyl CoA dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.06 E-value=0.00035 Score=54.96 Aligned_cols=39 Identities=15% Similarity=0.107 Sum_probs=35.0
Q ss_pred CCCeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCchhhh
Q 017914 58 SPNRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMKKK 96 (364)
Q Consensus 58 ~~~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~~~~ 96 (364)
+-++|.|+|+|.+|+.++..++..|++|++++++++..+
T Consensus 3 ~IkkvaViGaG~mG~~iA~~~a~~G~~V~l~D~~~~~l~ 41 (192)
T d1f0ya2 3 IVKHVTVIGGGLMGAGIAQVAAATGHTVVLVDQTEDILA 41 (192)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHH
T ss_pred eeEEEEEECcCHHHHHHHHHHHhCCCcEEEEECChHHHH
Confidence 457999999999999999999999999999999876543
|
| >d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Escherichia coli [TaxId: 562]
Probab=97.04 E-value=0.00032 Score=54.54 Aligned_cols=71 Identities=20% Similarity=0.161 Sum_probs=53.8
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCChhhH-Hh---h---ccCceeeEEE
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETAL-MI---L---TTLKNYTHLL 128 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~-~~---~---~~~d~v~~~~ 128 (364)
..+.+|||+| +|.+|..+++.+...|.+|++.++++++.+.+.+.+.+.+ .|..+.++ +. + .++|+|+.++
T Consensus 27 ~~g~~Vlv~ga~g~vG~~~iqlak~~Ga~Vi~~~~s~~k~~~~~~lGa~~v-i~~~~~d~~~~v~~~t~g~g~d~v~d~~ 105 (179)
T d1qora2 27 KPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALKAGAWQV-INYREEDLVERLKEITGGKKVRVVYDSV 105 (179)
T ss_dssp CTTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHTCSEE-EETTTSCHHHHHHHHTTTCCEEEEEECS
T ss_pred CCCCEEEEEccccccchHHHHHHHHhCCeEeecccchHHHHHHHhcCCeEE-EECCCCCHHHHHHHHhCCCCeEEEEeCc
Confidence 3457999998 8999999999999999999999999998887776676543 46666554 22 2 3456666655
|
| >d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: 6-phosphogluconate dehydrogenase species: Trypanosoma brucei [TaxId: 5691]
Probab=97.04 E-value=0.00021 Score=55.64 Aligned_cols=41 Identities=22% Similarity=0.343 Sum_probs=37.7
Q ss_pred CeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhh
Q 017914 60 NRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQ 100 (364)
Q Consensus 60 ~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~ 100 (364)
|+|-|+|.|.+|..+++.|+++||+|++.+|++++.+.+.+
T Consensus 2 MkIGvIGlG~MG~~ma~~L~~~G~~V~~~dr~~~~~~~l~~ 42 (178)
T d1pgja2 2 MDVGVVGLGVMGANLALNIAEKGFKVAVFNRTYSKSEEFMK 42 (178)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHH
T ss_pred CEEEEEeehHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHH
Confidence 78999999999999999999999999999999988776643
|
| >d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase AroE species: Escherichia coli [TaxId: 562]
Probab=97.04 E-value=0.00025 Score=54.71 Aligned_cols=43 Identities=23% Similarity=0.244 Sum_probs=38.3
Q ss_pred CCCCeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCchhhhhhh
Q 017914 57 QSPNRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELE 99 (364)
Q Consensus 57 ~~~~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~ 99 (364)
..+++|||+|+|..+++++..|.+.|.+|+++.|+.++.+.+.
T Consensus 16 ~~~k~vlIlGaGGaarai~~al~~~g~~i~I~nRt~~ka~~l~ 58 (170)
T d1nyta1 16 RPGLRILLIGAGGASRGVLLPLLSLDCAVTITNRTVSRAEELA 58 (170)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHH
T ss_pred CCCCEEEEECCcHHHHHHHHHhcccceEEEeccchHHHHHHHH
Confidence 4568999999999999999999999999999999988876653
|
| >d2hjsa1 c.2.1.3 (A:3-129,A:320-336) Usg-1 protein homolog PA3116 {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Usg-1 protein homolog PA3116 species: Pseudomonas aeruginosa [TaxId: 287]
Probab=97.04 E-value=0.00081 Score=50.05 Aligned_cols=33 Identities=15% Similarity=0.343 Sum_probs=26.7
Q ss_pred CCeEEEEc-CChhhHHHHHHHHhCCC---EEEEEEeC
Q 017914 59 PNRMLILG-MGFVGRIFAEKIKNQGW---VVSGTCTN 91 (364)
Q Consensus 59 ~~~vlVtG-tG~iG~~l~~~L~~~g~---~V~~~~r~ 91 (364)
.|+|.|+| ||++|+.+++.|.+++| ++..+..+
T Consensus 2 ~mnVaIvGATGyvG~eli~lL~~~~hP~~~l~~~~s~ 38 (144)
T d2hjsa1 2 PLNVAVVGATGSVGEALVGLLDERDFPLHRLHLLASA 38 (144)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEECT
T ss_pred CCEEEEECCCCHHHHHHHHHHHhcCCCceEEEEEeec
Confidence 37999999 99999999999987654 67666544
|
| >d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: MurCD N-terminal domain superfamily: MurCD N-terminal domain family: MurCD N-terminal domain domain: UDP-N-acetylmuramate-alanine ligase MurC species: Haemophilus influenzae [TaxId: 727]
Probab=97.02 E-value=0.0016 Score=44.60 Aligned_cols=67 Identities=21% Similarity=0.267 Sum_probs=47.4
Q ss_pred CCCCCeEEEEcCChhh-HHHHHHHHhCCCEEEEEEeCch-hhhhhhhCCceEEEccCChhhHHhhccCceeeE
Q 017914 56 WQSPNRMLILGMGFVG-RIFAEKIKNQGWVVSGTCTNVM-KKKELEQSGFDVHLFNANETALMILTTLKNYTH 126 (364)
Q Consensus 56 ~~~~~~vlVtGtG~iG-~~l~~~L~~~g~~V~~~~r~~~-~~~~l~~~~~~~~~~D~~~~~~~~~~~~d~v~~ 126 (364)
....++|.++|-|.+| +.|++.|.++|++|.+-++... ....+.+.++.+..++-.+ .+.+.|.|+.
T Consensus 5 ~~~~~~ihfiGigG~GMs~LA~~L~~~G~~VsGSD~~~~~~~~~L~~~Gi~v~~g~~~~----~i~~~d~vV~ 73 (96)
T d1p3da1 5 MRRVQQIHFIGIGGAGMSGIAEILLNEGYQISGSDIADGVVTQRLAQAGAKIYIGHAEE----HIEGASVVVV 73 (96)
T ss_dssp CTTCCEEEEETTTSTTHHHHHHHHHHHTCEEEEEESCCSHHHHHHHHTTCEEEESCCGG----GGTTCSEEEE
T ss_pred chhCCEEEEEEECHHHHHHHHHHHHhCCCEEEEEeCCCChhhhHHHHCCCeEEECCccc----cCCCCCEEEE
Confidence 4556899999844455 7789999999999999998643 3445666788776655432 3456676544
|
| >d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Ketose reductase (sorbitol dehydrogenase) species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.02 E-value=0.0024 Score=48.95 Aligned_cols=95 Identities=14% Similarity=0.037 Sum_probs=63.8
Q ss_pred CCCCeEEEEcCChhhHHHHHHHHhCCC-EEEEEEeCchhhhhhhhCCceEEEc-cCChhh-H-Hhh-----ccCceeeEE
Q 017914 57 QSPNRMLILGMGFVGRIFAEKIKNQGW-VVSGTCTNVMKKKELEQSGFDVHLF-NANETA-L-MIL-----TTLKNYTHL 127 (364)
Q Consensus 57 ~~~~~vlVtGtG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~l~~~~~~~~~~-D~~~~~-~-~~~-----~~~d~v~~~ 127 (364)
..+.+|+|+|+|.+|...++.+...|. +|++.++++.+.+..++.+.+.+.. +-.+.. . +.+ .++|.|+.+
T Consensus 25 ~~gd~VlI~G~G~iG~~~~~~a~~~G~~~Vi~~d~~~~rl~~a~~~Ga~~~~~~~~~~~~~~~~~~~~~~g~g~Dvvid~ 104 (171)
T d1pl8a2 25 TLGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGADLVLQISKESPQEIARKVEGQLGCKPEVTIEC 104 (171)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCSEEEECSSCCHHHHHHHHHHHHTSCCSEEEEC
T ss_pred CCCCEEEEECCCccHHHHHHHHHHcCCceEEeccCCHHHHHHHHHhCCcccccccccccccccccccccCCCCceEEEec
Confidence 345689999999999999999999998 7999999998887776667654433 323322 1 222 357888887
Q ss_pred EEecCCCCCCCChhhhHHHHHHHHhhcCCccEEEEEc
Q 017914 128 LVSIPPLEGTGDPMLKHGELLRSTLMNGHLQWLGYLS 164 (364)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~r~v~~S 164 (364)
.+. ..........++..| ++++++
T Consensus 105 ~G~-----------~~~~~~a~~~~~~gG--~iv~~G 128 (171)
T d1pl8a2 105 TGA-----------EASIQAGIYATRSGG--TLVLVG 128 (171)
T ss_dssp SCC-----------HHHHHHHHHHSCTTC--EEEECS
T ss_pred cCC-----------chhHHHHHHHhcCCC--EEEEEe
Confidence 642 112334455555544 788765
|
| >d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Glycerol-3- phosphate dehydrogenase species: Archaeoglobus fulgidus [TaxId: 2234]
Probab=96.96 E-value=0.0022 Score=49.69 Aligned_cols=34 Identities=24% Similarity=0.195 Sum_probs=31.5
Q ss_pred CeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCch
Q 017914 60 NRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVM 93 (364)
Q Consensus 60 ~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~ 93 (364)
|+|.|+|+|..|.+++..|.+.|++|+...|..+
T Consensus 1 MkI~ViGaG~~GtalA~~la~~g~~V~l~~r~~~ 34 (180)
T d1txga2 1 MIVSILGAGAMGSALSVPLVDNGNEVRIWGTEFD 34 (180)
T ss_dssp CEEEEESCCHHHHHHHHHHHHHCCEEEEECCGGG
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEEeccc
Confidence 7999999999999999999999999999998543
|
| >d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Putative shikimate dehydrogenase YdiB species: Escherichia coli [TaxId: 562]
Probab=96.95 E-value=0.0019 Score=50.06 Aligned_cols=74 Identities=11% Similarity=-0.014 Sum_probs=53.6
Q ss_pred CCCCCeEEEEcCChhhHHHHHHHHhCCC-EEEEEEeCchhhhhhh--------hCCceEEEccCChhh-H-HhhccCcee
Q 017914 56 WQSPNRMLILGMGFVGRIFAEKIKNQGW-VVSGTCTNVMKKKELE--------QSGFDVHLFNANETA-L-MILTTLKNY 124 (364)
Q Consensus 56 ~~~~~~vlVtGtG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~l~--------~~~~~~~~~D~~~~~-~-~~~~~~d~v 124 (364)
...+++|||+|+|..|+.++..|.+.|. ++++..|++++.+.+. .........|+.+.+ + ..+..+|.|
T Consensus 15 ~l~~k~vlIlGaGGaarai~~al~~~g~~~i~i~nR~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dii 94 (182)
T d1vi2a1 15 DIKGKTMVLLGAGGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDLADQQAFAEALASADIL 94 (182)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHHTCSEE
T ss_pred CcCCCEEEEECCcHHHHHHHHHHhhcCCceEeeeccchHHHHHHHHHHHHHHhhcCcceEeeecccccchhhhhccccee
Confidence 3456899999999999999999999986 7889999876554321 123445556776644 2 556778888
Q ss_pred eEEEE
Q 017914 125 THLLV 129 (364)
Q Consensus 125 ~~~~~ 129 (364)
+++..
T Consensus 95 IN~Tp 99 (182)
T d1vi2a1 95 TNGTK 99 (182)
T ss_dssp EECSS
T ss_pred ccccC
Confidence 88753
|
| >d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: MJ0490, lactate/malate dehydrogenase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=96.94 E-value=0.0037 Score=46.27 Aligned_cols=69 Identities=13% Similarity=0.036 Sum_probs=46.1
Q ss_pred CeEEEEc-CChhhHHHHHHHHhCC--CEEEEEEeCchh--hh----hhhh------CCceEEEccCChhhHHhhccCcee
Q 017914 60 NRMLILG-MGFVGRIFAEKIKNQG--WVVSGTCTNVMK--KK----ELEQ------SGFDVHLFNANETALMILTTLKNY 124 (364)
Q Consensus 60 ~~vlVtG-tG~iG~~l~~~L~~~g--~~V~~~~r~~~~--~~----~l~~------~~~~~~~~D~~~~~~~~~~~~d~v 124 (364)
|||.|+| +|.+|+.++..|..+| .++.+++++++. .+ .+.. .+.+....- +.+...++++|+|
T Consensus 1 MKV~IiGA~G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~~--~~d~~~l~~aDvV 78 (145)
T d1hyea1 1 MKVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVES--DENLRIIDESDVV 78 (145)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEE--TTCGGGGTTCSEE
T ss_pred CEEEEECCCChHHHHHHHHHHhCCcccccccccchhhhHhhhcccccchhcccccccCCccccCC--cchHHHhccceEE
Confidence 6899999 7999999999999988 499999987532 11 1211 122222111 1112577899999
Q ss_pred eEEEEe
Q 017914 125 THLLVS 130 (364)
Q Consensus 125 ~~~~~~ 130 (364)
+..++.
T Consensus 79 VitAG~ 84 (145)
T d1hyea1 79 IITSGV 84 (145)
T ss_dssp EECCSC
T ss_pred EEeccc
Confidence 998765
|
| >d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Chlorobium vibrioforme [TaxId: 1098]
Probab=96.87 E-value=0.0038 Score=46.17 Aligned_cols=67 Identities=10% Similarity=-0.091 Sum_probs=46.6
Q ss_pred CeEEEEcCChhhHHHHHHHHhCC--CEEEEEEeCchhhhhhh----h------CCceEEEccCChhhHHhhccCceeeEE
Q 017914 60 NRMLILGMGFVGRIFAEKIKNQG--WVVSGTCTNVMKKKELE----Q------SGFDVHLFNANETALMILTTLKNYTHL 127 (364)
Q Consensus 60 ~~vlVtGtG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~l~----~------~~~~~~~~D~~~~~~~~~~~~d~v~~~ 127 (364)
|||.|+|+|.+|+.++..|...| .++.+++++++...... . ....+...+ +.+.++++|.|+..
T Consensus 1 mKI~IIGaG~VG~~la~~l~~~~l~~el~L~Di~~~~~~~~~~d~~~~~~~~~~~~~i~~~~----~~~~~~dadvvvit 76 (142)
T d1guza1 1 MKITVIGAGNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGSN----DYADTANSDIVIIT 76 (142)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEEES----CGGGGTTCSEEEEC
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCCceEEEeccccccchhhhhhhhcccchhcccceEEecC----CHHHhcCCeEEEEE
Confidence 68999999999999999999987 59999998776533211 1 122222111 11467889999887
Q ss_pred EEe
Q 017914 128 LVS 130 (364)
Q Consensus 128 ~~~ 130 (364)
++.
T Consensus 77 ag~ 79 (142)
T d1guza1 77 AGL 79 (142)
T ss_dssp CSC
T ss_pred Eec
Confidence 764
|
| >d1u7za_ c.72.3.1 (A:) Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: CoaB-like family: CoaB-like domain: Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) species: Escherichia coli [TaxId: 562]
Probab=96.83 E-value=0.002 Score=51.68 Aligned_cols=64 Identities=9% Similarity=-0.109 Sum_probs=44.5
Q ss_pred CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCChhhH----HhhccCceeeEEEEecCC
Q 017914 67 MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETAL----MILTTLKNYTHLLVSIPP 133 (364)
Q Consensus 67 tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~----~~~~~~d~v~~~~~~~~~ 133 (364)
||..|.+|++.+..+|++|+++........ ..++..+...-.+.-. ..+...|.+++.|+....
T Consensus 31 SGk~G~aiA~~~~~~Ga~V~li~g~~~~~~---p~~~~~~~~~t~~~m~~~~~~~~~~~D~~i~aAAvsDf 98 (223)
T d1u7za_ 31 SGKMGFAIAAAAARRGANVTLVSGPVSLPT---PPFVKRVDVMTALEMEAAVNASVQQQNIFIGCAAVADY 98 (223)
T ss_dssp CSHHHHHHHHHHHHTTCEEEEEECSCCCCC---CTTEEEEECCSHHHHHHHHHHHGGGCSEEEECCBCCSE
T ss_pred cHHHHHHHHHHHHHcCCchhhhhcccccCc---ccccccceehhhHHHHHHHHhhhccceeEeeeechhhh
Confidence 589999999999999999999987543211 1355555543332111 455788999998876543
|
| >d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Bacterial secondary alcohol dehydrogenase species: Clostridium beijerinckii [TaxId: 1520]
Probab=96.81 E-value=0.0011 Score=51.20 Aligned_cols=94 Identities=12% Similarity=0.082 Sum_probs=61.9
Q ss_pred CCCCeEEEEcCChhhHHHHHHHHhCCC-EEEEEEeCchhhhhhhhCCceEEEccCChhhH-H---hh---ccCceeeEEE
Q 017914 57 QSPNRMLILGMGFVGRIFAEKIKNQGW-VVSGTCTNVMKKKELEQSGFDVHLFNANETAL-M---IL---TTLKNYTHLL 128 (364)
Q Consensus 57 ~~~~~vlVtGtG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~-~---~~---~~~d~v~~~~ 128 (364)
..+.+|+|+|+|.+|...++.+...|. +|++.++++.+.+...+.+...+ .|..+.++ + .+ .++|+|+.++
T Consensus 26 ~~g~~VlI~GaG~vGl~~~q~ak~~Ga~~Vi~~d~~~~r~~~a~~lGa~~~-i~~~~~~~~~~v~~~t~g~G~D~vid~~ 104 (174)
T d1jqba2 26 EMGSSVVVIGIGAVGLMGIAGAKLRGAGRIIGVGSRPICVEAAKFYGATDI-LNYKNGHIEDQVMKLTNGKGVDRVIMAG 104 (174)
T ss_dssp CTTCCEEEECCSHHHHHHHHHHHTTTCSCEEEECCCHHHHHHHHHHTCSEE-ECGGGSCHHHHHHHHTTTSCEEEEEECS
T ss_pred CCCCEEEEEcCCcchhhhhhhhhcccccccccccchhhhHHHHHhhCcccc-ccccchhHHHHHHHHhhccCcceEEEcc
Confidence 446789999999999999999998996 79999999888776666665432 34444332 1 11 3478877776
Q ss_pred EecCCCCCCCChhhhHHHHHHHHhhcCCccEEEEEc
Q 017914 129 VSIPPLEGTGDPMLKHGELLRSTLMNGHLQWLGYLS 164 (364)
Q Consensus 129 ~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~r~v~~S 164 (364)
+. . ......+..++..| +++.++
T Consensus 105 g~-------~----~~~~~a~~~~~~~G--~iv~~G 127 (174)
T d1jqba2 105 GG-------S----ETLSQAVKMVKPGG--IISNIN 127 (174)
T ss_dssp SC-------T----THHHHHHHHEEEEE--EEEECC
T ss_pred CC-------H----HHHHHHHHHHhcCC--EEEEEe
Confidence 42 1 12234455555544 677755
|
| >d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Toxoplasma gondii [TaxId: 5811]
Probab=96.73 E-value=0.0039 Score=46.75 Aligned_cols=74 Identities=9% Similarity=-0.073 Sum_probs=47.6
Q ss_pred CCCCeEEEEcCChhhHHHHHHHHhCCC-EEEEEEeCchhhhhhh----h----CCce-EEEccCChhhHHhhccCceeeE
Q 017914 57 QSPNRMLILGMGFVGRIFAEKIKNQGW-VVSGTCTNVMKKKELE----Q----SGFD-VHLFNANETALMILTTLKNYTH 126 (364)
Q Consensus 57 ~~~~~vlVtGtG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~l~----~----~~~~-~~~~D~~~~~~~~~~~~d~v~~ 126 (364)
.+.+||.|+|+|.+|+.++..|...+. ++++++.+++...... . .+.. .+.+. .+.+ ..+++.|.|+.
T Consensus 5 ~k~~KI~IIGaG~VG~~lA~~l~~~~~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~-~~~~-~~~~~adiVvi 82 (154)
T d1pzga1 5 QRRKKVAMIGSGMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRAE-YSYE-AALTGADCVIV 82 (154)
T ss_dssp SCCCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEEE-CSHH-HHHTTCSEEEE
T ss_pred cCCCcEEEECCCHHHHHHHHHHHhCCCceEEEEEeccccchhHHHHHhhhccccCCeeEEecc-Cchh-hhhcCCCeEEE
Confidence 456799999999999999988888774 8988888765433211 1 1111 11111 1111 46788999998
Q ss_pred EEEecC
Q 017914 127 LLVSIP 132 (364)
Q Consensus 127 ~~~~~~ 132 (364)
.++...
T Consensus 83 tag~~~ 88 (154)
T d1pzga1 83 TAGLTK 88 (154)
T ss_dssp CCSCSS
T ss_pred eccccc
Confidence 886543
|
| >d1dlja2 c.2.1.6 (A:1-196) UDP-glucose dehydrogenase (UDPGDH) {Streptococcus pyogenes [TaxId: 1314]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: UDP-glucose dehydrogenase (UDPGDH) species: Streptococcus pyogenes [TaxId: 1314]
Probab=96.70 E-value=0.001 Score=52.42 Aligned_cols=40 Identities=15% Similarity=0.158 Sum_probs=34.0
Q ss_pred CeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhh
Q 017914 60 NRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQ 100 (364)
Q Consensus 60 ~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~ 100 (364)
|+|.|+|.|++|..++..| ++|++|++++-++...+.+.+
T Consensus 1 MkI~ViGlG~vGl~~a~~~-a~g~~V~g~Din~~~v~~l~~ 40 (196)
T d1dlja2 1 MKIAVAGSGYVGLSLGVLL-SLQNEVTIVDILPSKVDKINN 40 (196)
T ss_dssp CEEEEECCSHHHHHHHHHH-TTTSEEEEECSCHHHHHHHHT
T ss_pred CEEEEECCChhHHHHHHHH-HCCCcEEEEECCHHHHHHHhh
Confidence 7899999999999998655 579999999998887766653
|
| >d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Thermotoga maritima [TaxId: 2336]
Probab=96.70 E-value=0.0044 Score=45.63 Aligned_cols=66 Identities=12% Similarity=-0.038 Sum_probs=46.5
Q ss_pred CeEEEEcCChhhHHHHHHHHhCC--CEEEEEEeCchhhhhhh---------hCCceEEEccCChhhHHhhccCceeeEEE
Q 017914 60 NRMLILGMGFVGRIFAEKIKNQG--WVVSGTCTNVMKKKELE---------QSGFDVHLFNANETALMILTTLKNYTHLL 128 (364)
Q Consensus 60 ~~vlVtGtG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~l~---------~~~~~~~~~D~~~~~~~~~~~~d~v~~~~ 128 (364)
|||.|+|+|.+|+.++..|..++ .++.++++++++..... ........+|. +.++++|.|+..+
T Consensus 1 mKI~IIGaG~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~~~Dl~~~~~~~~~~~~~~~~~-----~~~~~adivvita 75 (140)
T d1a5za1 1 MKIGIVGLGRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIYAGDY-----ADLKGSDVVIVAA 75 (140)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEEECCG-----GGGTTCSEEEECC
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCCCEEEEEecccccccchhccccccccccccccccCCcH-----HHhcCCCEEEEec
Confidence 78999999999999999888876 58999998775543211 01223332222 4678899998887
Q ss_pred Ee
Q 017914 129 VS 130 (364)
Q Consensus 129 ~~ 130 (364)
+.
T Consensus 76 g~ 77 (140)
T d1a5za1 76 GV 77 (140)
T ss_dssp CC
T ss_pred cc
Confidence 65
|
| >d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH-dependent ferredoxin reductase, BphA4 species: Pseudomonas sp., KKS102 [TaxId: 306]
Probab=96.65 E-value=0.0014 Score=47.21 Aligned_cols=37 Identities=30% Similarity=0.339 Sum_probs=33.6
Q ss_pred CCCeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCchh
Q 017914 58 SPNRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMK 94 (364)
Q Consensus 58 ~~~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~~ 94 (364)
..++|+|+|+|++|-.++..|.++|.+|+++.+.+.-
T Consensus 29 ~~~~vvIIGgG~iG~E~A~~l~~~g~~Vtli~~~~~~ 65 (121)
T d1d7ya2 29 PQSRLLIVGGGVIGLELAATARTAGVHVSLVETQPRL 65 (121)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSST
T ss_pred cCCeEEEECcchhHHHHHHHhhcccceEEEEeecccc
Confidence 3589999999999999999999999999999997643
|
| >d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=96.64 E-value=0.0066 Score=44.87 Aligned_cols=72 Identities=17% Similarity=-0.012 Sum_probs=44.4
Q ss_pred CeEEEEc-CChhhHHHHHHHHh-C--CCEEEEEEeCchhhh---hhhhCCc-eEEEccCChhhHHhhccCceeeEEEEec
Q 017914 60 NRMLILG-MGFVGRIFAEKIKN-Q--GWVVSGTCTNVMKKK---ELEQSGF-DVHLFNANETALMILTTLKNYTHLLVSI 131 (364)
Q Consensus 60 ~~vlVtG-tG~iG~~l~~~L~~-~--g~~V~~~~r~~~~~~---~l~~~~~-~~~~~D~~~~~~~~~~~~d~v~~~~~~~ 131 (364)
|||.|+| +|.+|+.++-.|.. . +.++..++..+.... .+..... .....-....+...+++.|+|+.+++..
T Consensus 1 MKV~IiGaaG~VG~~~a~~l~~~~~~~~el~L~D~~~~~~g~a~Dl~h~~~~~~~~~~~~~~~~~~~~~aDvvvitaG~~ 80 (145)
T d2cmda1 1 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPVTPGVAVDLSHIPTAVKIKGFSGEDATPALEGADVVLISAGVR 80 (145)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHSCTTCEEEEECSSTTHHHHHHHHHTSCSSCEEEEECSSCCHHHHTTCSEEEECCSCC
T ss_pred CEEEEEcCCChHHHHHHHHHHhCCCCCcEEEEecccccchhHHHHHHCCccccCCcEEEcCCCccccCCCCEEEECCCcc
Confidence 7999999 89999999987754 3 478999987542211 1221111 1111111112236788999999988764
|
| >d3etja2 c.30.1.1 (A:1-78) N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: BC N-terminal domain-like domain: N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain species: Escherichia coli [TaxId: 562]
Probab=96.63 E-value=0.0012 Score=43.04 Aligned_cols=52 Identities=15% Similarity=0.097 Sum_probs=39.4
Q ss_pred CCeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCCh
Q 017914 59 PNRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANE 112 (364)
Q Consensus 59 ~~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~ 112 (364)
+|+|.|+|+|.+|+-++....+-|++|++++-..+...... ..+++..++.+
T Consensus 1 ~k~vgIlG~GQLgrMl~~Aa~~LG~~v~vldp~~~~pa~~~--a~dvIT~e~E~ 52 (78)
T d3etja2 1 MKQVCVLGNGQLGRMLRQAGEPLGIAVWPVGLDAEPAAVPF--QQSVITAEIER 52 (78)
T ss_dssp CEEEEEEBCSHHHHHHHHHHGGGTEEEEEECTTSCGGGSCG--GGSEEEESSSC
T ss_pred CCEEEEEcCCHHHHHHHHHHHHcCCEEEEEcCCCCCccccc--ccceEEEeecc
Confidence 47899999999999999999999999999997655443221 23455555554
|
| >d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=96.59 E-value=0.0015 Score=46.68 Aligned_cols=36 Identities=19% Similarity=0.279 Sum_probs=32.8
Q ss_pred CCCeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCch
Q 017914 58 SPNRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVM 93 (364)
Q Consensus 58 ~~~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~ 93 (364)
..++|+|+|+|++|-.++..|.+.|.+|+++.|.+.
T Consensus 21 ~p~~v~IiGgG~ig~E~A~~l~~~G~~Vtlve~~~~ 56 (117)
T d1ebda2 21 VPKSLVVIGGGYIGIELGTAYANFGTKVTILEGAGE 56 (117)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred cCCeEEEECCCccceeeeeeecccccEEEEEEecce
Confidence 347999999999999999999999999999998754
|
| >d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]
Probab=96.58 E-value=0.013 Score=43.91 Aligned_cols=73 Identities=15% Similarity=0.037 Sum_probs=49.8
Q ss_pred CCCCeEEEEcCChhhHHHHHHHHhCCC--EEEEEEeCchhhhh----hhh----CCceEEEccCChhhHHhhccCceeeE
Q 017914 57 QSPNRMLILGMGFVGRIFAEKIKNQGW--VVSGTCTNVMKKKE----LEQ----SGFDVHLFNANETALMILTTLKNYTH 126 (364)
Q Consensus 57 ~~~~~vlVtGtG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~----l~~----~~~~~~~~D~~~~~~~~~~~~d~v~~ 126 (364)
.+.+||.|+|+|.+|+.++-.|..+|. ++.+++++++.... +.. .+...+... .+.+.+.+.|.|+.
T Consensus 18 ~~~~KV~IIGaG~VG~~~A~~l~~~~l~~ElvLiD~~~~~a~g~alDl~h~~~~~~~~~~~~~---~d~~~~~~adiVVi 94 (160)
T d1i0za1 18 VPNNKITVVGVGQVGMACAISILGKSLADELALVDVLEDKLKGEMMDLQHGSLFLQTPKIVAD---KDYSVTANSKIVVV 94 (160)
T ss_dssp CCSSEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCCCSEEEEC---SSGGGGTTCSEEEE
T ss_pred CCCCeEEEECCCHHHHHHHHHHHhcCCCcEEEEEEeccchhHHHHHHHhccccccCCCeEEec---cchhhcccccEEEE
Confidence 345799999999999999999999985 89999987655422 211 111111111 11246789999999
Q ss_pred EEEecC
Q 017914 127 LLVSIP 132 (364)
Q Consensus 127 ~~~~~~ 132 (364)
.++...
T Consensus 95 tAg~~~ 100 (160)
T d1i0za1 95 TAGVRQ 100 (160)
T ss_dssp CCSCCC
T ss_pred ecCCcc
Confidence 988643
|
| >d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase AroE species: Haemophilus influenzae [TaxId: 727]
Probab=96.57 E-value=0.0018 Score=49.68 Aligned_cols=68 Identities=16% Similarity=0.130 Sum_probs=49.2
Q ss_pred CCCCeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhh-----CCceEEEccCChhhHHhhccCceeeEEEE
Q 017914 57 QSPNRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQ-----SGFDVHLFNANETALMILTTLKNYTHLLV 129 (364)
Q Consensus 57 ~~~~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~-----~~~~~~~~D~~~~~~~~~~~~d~v~~~~~ 129 (364)
..+++|+|+|+|..|+.++..|.+.+.+|+++.|+.++.+.+.+ ..+.....|- ..+..+|.|+++..
T Consensus 16 ~~~k~vlIlGaGGaarai~~aL~~~~~~i~I~nR~~~~a~~l~~~~~~~~~~~~~~~~~-----~~~~~~diiIN~tp 88 (171)
T d1p77a1 16 RPNQHVLILGAGGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPYGNIQAVSMDS-----IPLQTYDLVINATS 88 (171)
T ss_dssp CTTCEEEEECCSHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGSCEEEEEGGG-----CCCSCCSEEEECCC
T ss_pred CCCCEEEEECCcHHHHHHHHHHcccCceeeeccchHHHHHHHHHHHhhccccchhhhcc-----ccccccceeeeccc
Confidence 45689999999999999999999988899999999887766532 1222222221 23456788887753
|
| >d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=96.53 E-value=0.003 Score=48.07 Aligned_cols=56 Identities=18% Similarity=0.228 Sum_probs=44.5
Q ss_pred CCCCeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCChh
Q 017914 57 QSPNRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANET 113 (364)
Q Consensus 57 ~~~~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~ 113 (364)
..+.+|+|.|+|.+|...++.+...|.+|+++++++.+.+...+.+.+.+ .|..+.
T Consensus 26 ~~g~~VlV~GaG~vG~~~~~~ak~~G~~Vi~~~~~~~~~~~a~~~Ga~~~-i~~~~~ 81 (166)
T d1llua2 26 RPGQWVAISGIGGLGHVAVQYARAMGLHVAAIDIDDAKLELARKLGASLT-VNARQE 81 (166)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTCSEE-EETTTS
T ss_pred CCCCEEEEeeccccHHHHHHHHHHcCCccceecchhhHHHhhhccCcccc-ccccch
Confidence 45679999999999999999999999999999999888777766666433 344443
|
| >d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Fatty oxidation complex alpha subunit, middle domain species: Pseudomonas fragi [TaxId: 296]
Probab=96.52 E-value=0.00081 Score=52.52 Aligned_cols=38 Identities=18% Similarity=0.160 Sum_probs=34.2
Q ss_pred CCeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCchhhh
Q 017914 59 PNRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMKKK 96 (364)
Q Consensus 59 ~~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~~~~ 96 (364)
-++|.|+|+|.+|+.++..++..|++|++++++++..+
T Consensus 4 I~~vaViGaG~mG~~iA~~~a~~G~~V~l~D~~~~~l~ 41 (186)
T d1wdka3 4 VKQAAVLGAGIMGGGIAYQSASKGTPILMKDINEHGIE 41 (186)
T ss_dssp CSSEEEECCHHHHHHHHHHHHHTTCCEEEECSSHHHHH
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCCeEEEEECCHHHHh
Confidence 46899999999999999999999999999999876543
|
| >d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=96.50 E-value=0.0085 Score=44.10 Aligned_cols=66 Identities=11% Similarity=-0.162 Sum_probs=45.9
Q ss_pred CeEEEEcCChhhHHHHHHHHhCC--CEEEEEEeCchhhhh----hhh------CCceEEE-ccCChhhHHhhccCceeeE
Q 017914 60 NRMLILGMGFVGRIFAEKIKNQG--WVVSGTCTNVMKKKE----LEQ------SGFDVHL-FNANETALMILTTLKNYTH 126 (364)
Q Consensus 60 ~~vlVtGtG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~----l~~------~~~~~~~-~D~~~~~~~~~~~~d~v~~ 126 (364)
|||.|+|+|.+|..++-.|..+| .++.+++++++.... +.+ ....+.. .|+ +.+++.|.|+.
T Consensus 1 MKI~IIGaG~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~alDl~~~~~~~~~~~~i~~~~d~-----~~~~~adiVvi 75 (142)
T d1ojua1 1 MKLGFVGAGRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGADY-----SLLKGSEIIVV 75 (142)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEESCG-----GGGTTCSEEEE
T ss_pred CEEEEECcCHHHHHHHHHHHhcCcCceEEEEecccchhhHHHHHHhhhccccCCCCccccCCCH-----HHhccccEEEE
Confidence 79999999999999999998887 489999988765322 111 1112221 222 46788899888
Q ss_pred EEEe
Q 017914 127 LLVS 130 (364)
Q Consensus 127 ~~~~ 130 (364)
.++.
T Consensus 76 tag~ 79 (142)
T d1ojua1 76 TAGL 79 (142)
T ss_dssp CCCC
T ss_pred eccc
Confidence 7764
|
| >d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]
Probab=96.50 E-value=0.011 Score=43.59 Aligned_cols=68 Identities=10% Similarity=0.070 Sum_probs=47.2
Q ss_pred CeEEEEcCChhhHHHHHHHHhCCC--EEEEEEeCchhhhh----hhh-----CCceEEEccCChhhHHhhccCceeeEEE
Q 017914 60 NRMLILGMGFVGRIFAEKIKNQGW--VVSGTCTNVMKKKE----LEQ-----SGFDVHLFNANETALMILTTLKNYTHLL 128 (364)
Q Consensus 60 ~~vlVtGtG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~----l~~-----~~~~~~~~D~~~~~~~~~~~~d~v~~~~ 128 (364)
.||.|+|+|.+|+.++..|..+|. ++.+++++++.... +.. ....+...+ +.+.+++.|+|+..+
T Consensus 2 ~Ki~IIGaG~VG~~~a~~l~~~~l~~ElvL~D~~~~~~~g~a~Dl~~a~~~~~~~~i~~~~----~~~~~~daDvVVita 77 (143)
T d1llda1 2 TKLAVIGAGAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGSSFYPTVSIDGSD----DPEICRDADMVVITA 77 (143)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHHTGGGSTTCEEEEES----CGGGGTTCSEEEECC
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCCcEEEEEEeccccchhHHHHHHhccccCCCceeecCC----CHHHhhCCcEEEEec
Confidence 589999999999999999999874 89999988765432 221 112222221 124677899999988
Q ss_pred Eec
Q 017914 129 VSI 131 (364)
Q Consensus 129 ~~~ 131 (364)
+..
T Consensus 78 G~~ 80 (143)
T d1llda1 78 GPR 80 (143)
T ss_dssp CCC
T ss_pred ccc
Confidence 753
|
| >d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: L-2-hydroxyisocapronate dehydrogenase, L-HICDH species: Lactobacillus confusus [TaxId: 1583]
Probab=96.46 E-value=0.0076 Score=44.61 Aligned_cols=67 Identities=21% Similarity=0.159 Sum_probs=47.4
Q ss_pred CeEEEEcCChhhHHHHHHHHhCC--CEEEEEEeCchhhhh----hhh------CCceEEEccCChhhHHhhccCceeeEE
Q 017914 60 NRMLILGMGFVGRIFAEKIKNQG--WVVSGTCTNVMKKKE----LEQ------SGFDVHLFNANETALMILTTLKNYTHL 127 (364)
Q Consensus 60 ~~vlVtGtG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~----l~~------~~~~~~~~D~~~~~~~~~~~~d~v~~~ 127 (364)
+||.|+|+|.+|..++-.|+.+| .++.+++++.++... +.+ ........|. +.++++|.|+..
T Consensus 2 kKI~IIGaG~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~~~Dl~~a~~~~~~~~~~~~~d~-----~~l~~adiVVit 76 (146)
T d1hyha1 2 RKIGIIGLGNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVINDW-----AALADADVVIST 76 (146)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEESCG-----GGGTTCSEEEEC
T ss_pred CeEEEECcCHHHHHHHHHHHhcCCCceEEEEecccchhhhHHHhhhccccccCCccceeccCH-----HHhccccEEEEe
Confidence 78999999999999999999887 489999987765322 111 1223333332 457899999988
Q ss_pred EEec
Q 017914 128 LVSI 131 (364)
Q Consensus 128 ~~~~ 131 (364)
++..
T Consensus 77 aG~~ 80 (146)
T d1hyha1 77 LGNI 80 (146)
T ss_dssp CSCG
T ss_pred cccc
Confidence 7754
|
| >d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH peroxidase species: Enterococcus faecalis [TaxId: 1351]
Probab=96.45 E-value=0.0024 Score=46.01 Aligned_cols=37 Identities=22% Similarity=0.259 Sum_probs=33.2
Q ss_pred CCCCeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCch
Q 017914 57 QSPNRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVM 93 (364)
Q Consensus 57 ~~~~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~ 93 (364)
...++|+|+|+|++|-.++..|.+.|.+|+++.|.+.
T Consensus 28 ~~~k~vvViGgG~iG~E~A~~l~~~g~~Vtlie~~~~ 64 (123)
T d1nhpa2 28 PEVNNVVVIGSGYIGIEAAEAFAKAGKKVTVIDILDR 64 (123)
T ss_dssp TTCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred cCCCEEEEECChHHHHHHHHHhhccceEEEEEEecCc
Confidence 3457999999999999999999999999999998753
|
| >d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Benzyl alcohol dehydrogenase species: Acinetobacter calcoaceticus [TaxId: 471]
Probab=96.43 E-value=0.0026 Score=48.92 Aligned_cols=72 Identities=13% Similarity=-0.015 Sum_probs=48.0
Q ss_pred CCCCeEEEEcCChhhHHHHHHHHhCCCE-EEEEEeCchhhhhhhhCCceEEEccCChhhH-H---hh--ccCceeeEEEE
Q 017914 57 QSPNRMLILGMGFVGRIFAEKIKNQGWV-VSGTCTNVMKKKELEQSGFDVHLFNANETAL-M---IL--TTLKNYTHLLV 129 (364)
Q Consensus 57 ~~~~~vlVtGtG~iG~~l~~~L~~~g~~-V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~-~---~~--~~~d~v~~~~~ 129 (364)
..+.+|+|+|+|.+|...++.+...|.+ |++.++++.+.+..++.+...+ .|..+.++ + .+ .++|.|+.+++
T Consensus 27 ~~g~~VlI~G~G~iG~~~~~~ak~~g~~~v~~~~~~~~k~~~a~~~Ga~~~-i~~~~~~~~~~i~~~t~gg~D~vid~~G 105 (174)
T d1f8fa2 27 TPASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRLELAKQLGATHV-INSKTQDPVAAIKEITDGGVNFALESTG 105 (174)
T ss_dssp CTTCEEEEESCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHHHTCSEE-EETTTSCHHHHHHHHTTSCEEEEEECSC
T ss_pred CCCCEEEEeCCCHHHhhhhhcccccccceeeeeccHHHHHHHHHHcCCeEE-EeCCCcCHHHHHHHHcCCCCcEEEEcCC
Confidence 4567899999999999999998888875 5566777777666665565322 34444333 2 22 24677777653
|
| >d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=96.40 E-value=0.0019 Score=46.46 Aligned_cols=36 Identities=22% Similarity=0.274 Sum_probs=32.8
Q ss_pred CCeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCchh
Q 017914 59 PNRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMK 94 (364)
Q Consensus 59 ~~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~~ 94 (364)
.++++|+|+|+||-.++..|.+.|.+|+++.|.+.-
T Consensus 23 p~~~vIiG~G~ig~E~A~~l~~lG~~Vtii~~~~~~ 58 (122)
T d1v59a2 23 PKRLTIIGGGIIGLEMGSVYSRLGSKVTVVEFQPQI 58 (122)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CCeEEEECCCchHHHHHHHHHhhCcceeEEEecccc
Confidence 479999999999999999999999999999987543
|
| >d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=96.39 E-value=0.013 Score=43.84 Aligned_cols=70 Identities=17% Similarity=0.056 Sum_probs=47.5
Q ss_pred CCCeEEEEcCChhhHHHHHHHHhCCC--EEEEEEeCchhhhh----hhh----CCc-e-EEEccCChhhHHhhccCceee
Q 017914 58 SPNRMLILGMGFVGRIFAEKIKNQGW--VVSGTCTNVMKKKE----LEQ----SGF-D-VHLFNANETALMILTTLKNYT 125 (364)
Q Consensus 58 ~~~~vlVtGtG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~----l~~----~~~-~-~~~~D~~~~~~~~~~~~d~v~ 125 (364)
...||.|+|+|.+|+.++..|..+|. ++.+++++.+.... +.. .+. . ....|+ ..+.+.|.|+
T Consensus 18 ~~~KI~IIGaG~VG~~~A~~l~~~~l~~elvL~D~~~~~a~g~alDl~~~~~~~~~~~~~~~~d~-----~~~~~adivv 92 (159)
T d2ldxa1 18 SRCKITVVGVGDVGMACAISILLKGLADELALVDADTDKLRGEALDLQHGSLFLSTPKIVFGKDY-----NVSANSKLVI 92 (159)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHTTTSCSEEEEECSCHHHHHHHHHHHHHTTTTCSCCEEEEESSG-----GGGTTEEEEE
T ss_pred CCCeEEEECCCHHHHHHHHHHHhcCCCCEEEEEeCCchhhhccHHHHhCcchhcCCCeEEeccch-----hhhccccEEE
Confidence 34689999999999999999999874 89999988655321 221 111 1 122222 4567889888
Q ss_pred EEEEecC
Q 017914 126 HLLVSIP 132 (364)
Q Consensus 126 ~~~~~~~ 132 (364)
..++...
T Consensus 93 itag~~~ 99 (159)
T d2ldxa1 93 ITAGARM 99 (159)
T ss_dssp ECCSCCC
T ss_pred Eeccccc
Confidence 8776533
|
| >d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Escherichia coli [TaxId: 562]
Probab=96.38 E-value=0.002 Score=45.87 Aligned_cols=35 Identities=20% Similarity=0.277 Sum_probs=32.3
Q ss_pred CCeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCch
Q 017914 59 PNRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVM 93 (364)
Q Consensus 59 ~~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~ 93 (364)
.++|+|+|+|++|-.++..|.+.|.+|+++.|.+.
T Consensus 21 p~~vvIiGgG~ig~E~A~~l~~~G~~Vtlve~~~~ 55 (116)
T d1gesa2 21 PERVAVVGAGYIGVELGGVINGLGAKTHLFEMFDA 55 (116)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CCEEEEECCChhhHHHHHHhhccccEEEEEeecch
Confidence 47899999999999999999999999999999754
|
| >d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Plasmodium falciparum [TaxId: 5833]
Probab=96.37 E-value=0.0019 Score=46.05 Aligned_cols=35 Identities=17% Similarity=0.183 Sum_probs=32.4
Q ss_pred CCeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCch
Q 017914 59 PNRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVM 93 (364)
Q Consensus 59 ~~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~ 93 (364)
.++|+|+|+|++|-.++..|.+.|.+|+++.|.+.
T Consensus 22 p~~v~IiGgG~iG~E~A~~l~~~g~~Vtlv~~~~~ 56 (117)
T d1onfa2 22 SKKIGIVGSGYIAVELINVIKRLGIDSYIFARGNR 56 (117)
T ss_dssp CSEEEEECCSHHHHHHHHHHHTTTCEEEEECSSSS
T ss_pred CCEEEEECCchHHHHHHHHHHhccccceeeehhcc
Confidence 57999999999999999999999999999999653
|
| >d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Clostridium thermocellum [TaxId: 1515]
Probab=96.36 E-value=0.0062 Score=44.90 Aligned_cols=67 Identities=12% Similarity=-0.014 Sum_probs=44.1
Q ss_pred CeEEEEcCChhhHHHHHHHHhCCC--EEEEEEeCchhhhh----hhh-----CCceEEEccCChhhHHhhccCceeeEEE
Q 017914 60 NRMLILGMGFVGRIFAEKIKNQGW--VVSGTCTNVMKKKE----LEQ-----SGFDVHLFNANETALMILTTLKNYTHLL 128 (364)
Q Consensus 60 ~~vlVtGtG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~----l~~-----~~~~~~~~D~~~~~~~~~~~~d~v~~~~ 128 (364)
+||.|+|+|.+|+.++-.|..++. ++.+++++++.... +.+ .......+ +...+++.|.|+..+
T Consensus 2 ~KI~IIGaG~VG~~~a~~l~~~~l~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~-----~~~~~~~adivvita 76 (142)
T d1y6ja1 2 SKVAIIGAGFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLYAG-----DYSDVKDCDVIVVTA 76 (142)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC-------CGGGGTTCSEEEECC
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCCCEEEEEeccCCccceeeeeeccCcccCCCeeEeeC-----cHHHhCCCceEEEec
Confidence 589999999999999999999874 89999987765322 211 11111111 225678899998887
Q ss_pred Eec
Q 017914 129 VSI 131 (364)
Q Consensus 129 ~~~ 131 (364)
+..
T Consensus 77 g~~ 79 (142)
T d1y6ja1 77 GAN 79 (142)
T ss_dssp CC-
T ss_pred ccc
Confidence 643
|
| >d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: S-adenosylhomocystein hydrolase species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.35 E-value=0.0036 Score=46.95 Aligned_cols=67 Identities=15% Similarity=0.142 Sum_probs=48.3
Q ss_pred CCCCCeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCChhhHHhhccCceeeEEE
Q 017914 56 WQSPNRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETALMILTTLKNYTHLL 128 (364)
Q Consensus 56 ~~~~~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~~~~~~~d~v~~~~ 128 (364)
...+|+|+|+|.|.||+.+++.|...|.+|++....+.+.-...-.+..+... + +++...|.++-+.
T Consensus 21 ~l~Gk~v~V~GyG~iG~g~A~~~rg~G~~V~v~e~dp~~al~A~~dG~~v~~~-----~-~a~~~adivvtaT 87 (163)
T d1li4a1 21 MIAGKVAVVAGYGDVGKGCAQALRGFGARVIITEIDPINALQAAMEGYEVTTM-----D-EACQEGNIFVTTT 87 (163)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEECCH-----H-HHTTTCSEEEECS
T ss_pred eecCCEEEEeccccccHHHHHHHHhCCCeeEeeecccchhHHhhcCceEeeeh-----h-hhhhhccEEEecC
Confidence 35689999999999999999999999999999999876543333344443321 1 4556667555443
|
| >d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Putative zinc-binding alcohol dehydrogenase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=96.34 E-value=0.0012 Score=51.65 Aligned_cols=95 Identities=19% Similarity=0.208 Sum_probs=55.1
Q ss_pred CeEEEEc-CChhhHHHHHHHHhCCCE-EEEEEeCchhhhhhh-hCCceEEEccCChhhH-Hhh-----ccCceeeEEEEe
Q 017914 60 NRMLILG-MGFVGRIFAEKIKNQGWV-VSGTCTNVMKKKELE-QSGFDVHLFNANETAL-MIL-----TTLKNYTHLLVS 130 (364)
Q Consensus 60 ~~vlVtG-tG~iG~~l~~~L~~~g~~-V~~~~r~~~~~~~l~-~~~~~~~~~D~~~~~~-~~~-----~~~d~v~~~~~~ 130 (364)
.+|||+| +|.+|+..++.+...|.+ |++.++++++...+. ..+.+. ..|..+.++ +.+ .++|+|+.+.+.
T Consensus 32 etVLI~gaaGgVG~~aiQlak~~Ga~~vi~~~~~~e~~~~l~~~~gad~-vi~~~~~~~~~~~~~~~~~GvDvv~D~vGg 110 (187)
T d1vj1a2 32 QTMVVSGAAGACGSLAGQIGHLLGCSRVVGICGTQEKCLFLTSELGFDA-AVNYKTGNVAEQLREACPGGVDVYFDNVGG 110 (187)
T ss_dssp CEEEESSTTSTTGGGHHHHHHHTTCSEEEEEESSHHHHHHHHHHSCCSE-EEETTSSCHHHHHHHHCTTCEEEEEESSCH
T ss_pred CEEEEECCCchhhHHHHHHHHHcCCcceecccchHHHHhhhhhcccceE-EeeccchhHHHHHHHHhccCceEEEecCCc
Confidence 6799998 899999999999889975 555666666555443 344443 345555443 211 356777665531
Q ss_pred cCCCCCCCChhhhHHHHHHHHhhcCCccEEEEEccceee
Q 017914 131 IPPLEGTGDPMLKHGELLRSTLMNGHLQWLGYLSSTGVY 169 (364)
Q Consensus 131 ~~~~~~~~~~~~~~~~~l~~a~~~~~~~r~v~~Ss~~vy 169 (364)
......+..++..| |++.++..+-|
T Consensus 111 ------------~~~~~~~~~l~~~G--~iv~~G~~s~~ 135 (187)
T d1vj1a2 111 ------------DISNTVISQMNENS--HIILCGQISQY 135 (187)
T ss_dssp ------------HHHHHHHTTEEEEE--EEEEC------
T ss_pred ------------hhHHHHhhhccccc--cEEEecccccc
Confidence 12334455555544 78877654433
|
| >d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Azotobacter vinelandii [TaxId: 354]
Probab=96.34 E-value=0.0026 Score=45.51 Aligned_cols=36 Identities=17% Similarity=0.200 Sum_probs=32.8
Q ss_pred CCCeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCch
Q 017914 58 SPNRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVM 93 (364)
Q Consensus 58 ~~~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~ 93 (364)
..++++|+|+|+||-.++..|.+.|.+|+++.|...
T Consensus 21 ~p~~i~IiG~G~ig~E~A~~l~~~G~~Vtiv~~~~~ 56 (119)
T d3lada2 21 VPGKLGVIGAGVIGLELGSVWARLGAEVTVLEAMDK 56 (119)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred CCCeEEEECCChHHHHHHHHHHHcCCceEEEEeecc
Confidence 347999999999999999999999999999998754
|
| >d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=96.27 E-value=0.016 Score=43.04 Aligned_cols=70 Identities=14% Similarity=0.011 Sum_probs=46.5
Q ss_pred CCeEEEEcCChhhHHHHHHHHhCC-CEEEEEEeCchhhhhh----hh------CCceEEEccCChhhHHhhccCceeeEE
Q 017914 59 PNRMLILGMGFVGRIFAEKIKNQG-WVVSGTCTNVMKKKEL----EQ------SGFDVHLFNANETALMILTTLKNYTHL 127 (364)
Q Consensus 59 ~~~vlVtGtG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~l----~~------~~~~~~~~D~~~~~~~~~~~~d~v~~~ 127 (364)
++||.|+|+|.+|+.++..|..++ .++.+++++++..... .. ....+...+ +...+++.|.|+..
T Consensus 3 ~~KI~IIGaG~VG~~~a~~l~~~~l~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~v~~~~----~~~~~~~advvvit 78 (150)
T d1t2da1 3 KAKIVLVGSGMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGSN----TYDDLAGADVVIVT 78 (150)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEEC----CGGGGTTCSEEEEC
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCCeEEEEeccCCcceeeecchhhhccccCCCcEEEecc----cccccCCCcEEEEe
Confidence 469999999999999998777776 4888889876543321 11 122222211 11467889999888
Q ss_pred EEecC
Q 017914 128 LVSIP 132 (364)
Q Consensus 128 ~~~~~ 132 (364)
++...
T Consensus 79 ag~~~ 83 (150)
T d1t2da1 79 AGFTK 83 (150)
T ss_dssp CSCSS
T ss_pred ccccc
Confidence 87543
|
| >d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: L-alanine dehydrogenase species: Phormidium lapideum [TaxId: 32060]
Probab=96.26 E-value=0.0023 Score=48.21 Aligned_cols=70 Identities=23% Similarity=0.219 Sum_probs=53.5
Q ss_pred CCeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhh---CCceEEEccCChhhH-HhhccCceeeEEEEe
Q 017914 59 PNRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQ---SGFDVHLFNANETAL-MILTTLKNYTHLLVS 130 (364)
Q Consensus 59 ~~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~---~~~~~~~~D~~~~~~-~~~~~~d~v~~~~~~ 130 (364)
.-+|+|+|.|..|..-++.+...|.+|++++.+.+..+.++. ..++....+ .... +.+..+|.|+..+-.
T Consensus 32 pa~V~ViGaGvaG~~A~~~A~~lGA~V~~~D~~~~~l~~l~~~~~~~~~~~~~~--~~~l~~~~~~aDivI~aali 105 (168)
T d1pjca1 32 PGKVVILGGGVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGSRVELLYSN--SAEIETAVAEADLLIGAVLV 105 (168)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGSEEEECC--HHHHHHHHHTCSEEEECCCC
T ss_pred CcEEEEECCChHHHHHHHHHhhCCCEEEEEeCcHHHHHHHHHhhcccceeehhh--hhhHHHhhccCcEEEEeeec
Confidence 469999999999999999999999999999999888776654 233332221 1222 677889999887754
|
| >d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH oxidase /nitrite reductase species: Pyrococcus furiosus [TaxId: 2261]
Probab=96.23 E-value=0.0025 Score=45.82 Aligned_cols=34 Identities=24% Similarity=0.445 Sum_probs=31.5
Q ss_pred CCeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCc
Q 017914 59 PNRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNV 92 (364)
Q Consensus 59 ~~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~ 92 (364)
.++|+|+|+|++|-.++..|.+.|++|+++.|.+
T Consensus 32 ~~~vvIiGgG~iG~E~A~~l~~~g~~Vtlv~~~~ 65 (122)
T d1xhca2 32 SGEAIIIGGGFIGLELAGNLAEAGYHVKLIHRGA 65 (122)
T ss_dssp HSEEEEEECSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CCcEEEECCcHHHHHHHHHhhcccceEEEEeccc
Confidence 3789999999999999999999999999998864
|
| >d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus aurantiacus [TaxId: 1108]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Chloroflexus aurantiacus [TaxId: 1108]
Probab=96.22 E-value=0.016 Score=42.57 Aligned_cols=68 Identities=15% Similarity=-0.001 Sum_probs=45.6
Q ss_pred CeEEEEcCChhhHHHHHHHHhCCC-EEEEEEeCchhhhh----hhh------CCceEE-EccCChhhHHhhccCceeeEE
Q 017914 60 NRMLILGMGFVGRIFAEKIKNQGW-VVSGTCTNVMKKKE----LEQ------SGFDVH-LFNANETALMILTTLKNYTHL 127 (364)
Q Consensus 60 ~~vlVtGtG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~----l~~------~~~~~~-~~D~~~~~~~~~~~~d~v~~~ 127 (364)
+||.|+|+|.+|..++-.|..++. ++.+++.+++.... +.. ....+. ..|+ ..+.+.|.|+.+
T Consensus 2 ~KI~IIGaG~VG~~~A~~l~~~~l~dl~l~D~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~~d~-----~~~~~advvvit 76 (142)
T d1uxja1 2 KKISIIGAGFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGTNNY-----ADTANSDVIVVT 76 (142)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEESCG-----GGGTTCSEEEEC
T ss_pred CeEEEECCCHHHHHHHHHHHhCCcceEEEEeeccccchhHHHHhhccccccCCCCEEEecCcH-----HHhcCCCEEEEe
Confidence 689999999999999998888774 88999887654322 110 112222 1222 456788999888
Q ss_pred EEecC
Q 017914 128 LVSIP 132 (364)
Q Consensus 128 ~~~~~ 132 (364)
++...
T Consensus 77 ag~~~ 81 (142)
T d1uxja1 77 SGAPR 81 (142)
T ss_dssp CSCC-
T ss_pred eeccC
Confidence 87543
|
| >d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Dihydrodipicolinate reductase species: Thermotoga maritima [TaxId: 2336]
Probab=96.20 E-value=0.0066 Score=43.83 Aligned_cols=29 Identities=17% Similarity=0.249 Sum_probs=26.2
Q ss_pred CeEEEEc-CChhhHHHHHHHHhCCCEEEEE
Q 017914 60 NRMLILG-MGFVGRIFAEKIKNQGWVVSGT 88 (364)
Q Consensus 60 ~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~ 88 (364)
|||.|.| +|-+|+.|++.+.++|+++++.
T Consensus 1 mki~i~G~~GrMG~~i~~~~~~~~~~l~~~ 30 (128)
T d1vm6a3 1 MKYGIVGYSGRMGQEIQKVFSEKGHELVLK 30 (128)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHhcCCCeEEEE
Confidence 6899999 8999999999999999988764
|
| >d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Putidaredoxin reductase species: Pseudomonas putida [TaxId: 303]
Probab=96.17 E-value=0.0033 Score=45.88 Aligned_cols=37 Identities=22% Similarity=0.286 Sum_probs=33.5
Q ss_pred CCCeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCchh
Q 017914 58 SPNRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMK 94 (364)
Q Consensus 58 ~~~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~~ 94 (364)
..++|+|+|+|++|-.++..|.+.|.+|+++.+.+.-
T Consensus 34 ~~k~v~VIGgG~iG~E~A~~l~~~g~~Vtvie~~~~~ 70 (133)
T d1q1ra2 34 ADNRLVVIGGGYIGLEVAATAIKANMHVTLLDTAARV 70 (133)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSST
T ss_pred cCCEEEEECCchHHHHHHHHHHhhCcceeeeeecccc
Confidence 4589999999999999999999999999999997543
|
| >d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Pseudomonas putida [TaxId: 303]
Probab=96.16 E-value=0.0027 Score=45.09 Aligned_cols=35 Identities=20% Similarity=0.351 Sum_probs=32.1
Q ss_pred CCeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCch
Q 017914 59 PNRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVM 93 (364)
Q Consensus 59 ~~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~ 93 (364)
+++++|+|+|++|-.++..|.+.|++|+++.|.+.
T Consensus 21 p~~vvIiGgG~~G~E~A~~l~~~g~~Vtlve~~~~ 55 (115)
T d1lvla2 21 PQHLVVVGGGYIGLELGIAYRKLGAQVSVVEARER 55 (115)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHhhcccceEEEeeecc
Confidence 47999999999999999999999999999988653
|
| >d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase-like protein HI0607 species: Haemophilus influenzae [TaxId: 727]
Probab=96.16 E-value=0.0025 Score=48.65 Aligned_cols=42 Identities=19% Similarity=0.301 Sum_probs=36.9
Q ss_pred CCCeEEEEcCChhhHHHHHHHHhCCC-EEEEEEeCchhhhhhh
Q 017914 58 SPNRMLILGMGFVGRIFAEKIKNQGW-VVSGTCTNVMKKKELE 99 (364)
Q Consensus 58 ~~~~vlVtGtG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~l~ 99 (364)
..++|||+|+|..|++++..|.+.|. +|+++.|+.++...+.
T Consensus 16 ~~~~vlIlGaGGaarai~~aL~~~g~~~I~I~nR~~~ka~~L~ 58 (167)
T d1npya1 16 KNAKVIVHGSGGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLA 58 (167)
T ss_dssp TTSCEEEECSSTTHHHHHHHHHHTTCCCEEEECSCHHHHHHHH
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCCEEEEecccHHHHHHHH
Confidence 45789999999999999999999996 7999999988876664
|
| >d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.15 E-value=0.0031 Score=45.54 Aligned_cols=35 Identities=23% Similarity=0.305 Sum_probs=32.3
Q ss_pred CCeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCch
Q 017914 59 PNRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVM 93 (364)
Q Consensus 59 ~~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~ 93 (364)
.++|+|+|+|++|-.++..|.+.|.+|+++.|++.
T Consensus 22 pk~vvIvGgG~iG~E~A~~l~~~G~~Vtlv~~~~~ 56 (125)
T d3grsa2 22 PGRSVIVGAGYIAVEMAGILSALGSKTSLMIRHDK 56 (125)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CCEEEEEcCCccHHHHHHHHhcCCcEEEEEeeccc
Confidence 37999999999999999999999999999999754
|
| >d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: D-aminoacid oxidase, N-terminal domain domain: D-aminoacid oxidase, N-terminal domain species: Rhodotorula gracilis [TaxId: 5286]
Probab=96.09 E-value=0.004 Score=50.75 Aligned_cols=35 Identities=26% Similarity=0.438 Sum_probs=32.1
Q ss_pred CCCeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCc
Q 017914 58 SPNRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNV 92 (364)
Q Consensus 58 ~~~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~ 92 (364)
..++|+|+|+|..|-..+..|.++|++|+++.|..
T Consensus 5 ~~~kVvVIGaGiaGl~~A~~L~~~G~~V~vier~~ 39 (268)
T d1c0pa1 5 SQKRVVVLGSGVIGLSSALILARKGYSVHILARDL 39 (268)
T ss_dssp CSCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCCcEEEECccHHHHHHHHHHHHCCCCEEEEeCCC
Confidence 34689999999999999999999999999999864
|
| >d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Mammalian thioredoxin reductase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=96.07 E-value=0.0033 Score=45.13 Aligned_cols=33 Identities=21% Similarity=0.330 Sum_probs=30.8
Q ss_pred CCeEEEEcCChhhHHHHHHHHhCCCEEEEEEeC
Q 017914 59 PNRMLILGMGFVGRIFAEKIKNQGWVVSGTCTN 91 (364)
Q Consensus 59 ~~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~ 91 (364)
.++++|+|+|+||-.++..|.+.|.+|+++.|+
T Consensus 20 P~~vvIIGgG~iG~E~A~~l~~lG~~Vtii~~~ 52 (122)
T d1h6va2 20 PGKTLVVGASYVALECAGFLAGIGLDVTVMVRS 52 (122)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CCeEEEECCCccHHHHHHHHhhcCCeEEEEEec
Confidence 468999999999999999999999999999875
|
| >d2csua1 c.2.1.8 (A:1-129) Acetate-CoA ligase alpha chain, AcdA, N-terminal domain {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: CoA-binding domain domain: Acetate-CoA ligase alpha chain, AcdA, N-terminal domain species: Pyrococcus horikoshii [TaxId: 53953]
Probab=95.95 E-value=0.019 Score=41.29 Aligned_cols=87 Identities=8% Similarity=0.013 Sum_probs=53.5
Q ss_pred CCCCeEEEEc-C---ChhhHHHHHHHHhCC-CEEEEEEeCchhhhhhhhCCceEEEccCChhhHHhhccCceeeEEEEec
Q 017914 57 QSPNRMLILG-M---GFVGRIFAEKIKNQG-WVVSGTCTNVMKKKELEQSGFDVHLFNANETALMILTTLKNYTHLLVSI 131 (364)
Q Consensus 57 ~~~~~vlVtG-t---G~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~~~~~~~d~v~~~~~~~ 131 (364)
...++|.|+| + |..|..+.+.|.+.| ++|+.+..+.+.. .|... .-++.| .-..+|.++.+..
T Consensus 6 f~PksIAVVGaS~~~~~~g~~v~~~L~~~~~g~v~pVnP~~~~i-----~G~~~-y~sl~d----lp~~vDlvvi~vp-- 73 (129)
T d2csua1 6 FNPKGIAVIGASNDPKKLGYEVFKNLKEYKKGKVYPVNIKEEEV-----QGVKA-YKSVKD----IPDEIDLAIIVVP-- 73 (129)
T ss_dssp TSCSEEEEETCCSCTTSHHHHHHHHHTTCCSSEEEEECSSCSEE-----TTEEC-BSSTTS----CSSCCSEEEECSC--
T ss_pred CCCCeEEEEccCCCCCCcHHHHHHHHHHcCCCcEEEeccCcccc-----CCeEe-ecchhh----cCCCCceEEEecC--
Confidence 3457999999 6 899999999998766 6898887653322 12221 122222 2234565554431
Q ss_pred CCCCCCCChhhhHHHHHHHHhhcCCccEEEEEcc
Q 017914 132 PPLEGTGDPMLKHGELLRSTLMNGHLQWLGYLSS 165 (364)
Q Consensus 132 ~~~~~~~~~~~~~~~~l~~a~~~~~~~r~v~~Ss 165 (364)
. .....+++.+.+.|++.++.+|+
T Consensus 74 ---------~-~~~~~~~~~~~~~g~~~~vi~s~ 97 (129)
T d2csua1 74 ---------K-RFVKDTLIQCGEKGVKGVVIITA 97 (129)
T ss_dssp ---------H-HHHHHHHHHHHHHTCCEEEECCC
T ss_pred ---------h-HHhHHHHHHHHHcCCCEEEEecc
Confidence 1 23344566666778988887775
|
| >d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=95.94 E-value=0.0086 Score=45.36 Aligned_cols=52 Identities=19% Similarity=0.194 Sum_probs=44.0
Q ss_pred CCCCeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEc
Q 017914 57 QSPNRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLF 108 (364)
Q Consensus 57 ~~~~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~ 108 (364)
..+.+|||.|+|.+|...++.+...|.+|++.++++++.+..++.+++.+..
T Consensus 26 ~~g~~vlv~G~G~iG~~a~~~a~~~g~~v~~~~~~~~r~~~~k~~Ga~~~~~ 77 (168)
T d1rjwa2 26 KPGEWVAIYGIGGLGHVAVQYAKAMGLNVVAVDIGDEKLELAKELGADLVVN 77 (168)
T ss_dssp CTTCEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCSEEEC
T ss_pred CCCCEEEEeecccchhhhhHHHhcCCCeEeccCCCHHHhhhhhhcCcceecc
Confidence 3467899999999999999999999999999999998888777777765543
|
| >d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: MurCD N-terminal domain superfamily: MurCD N-terminal domain family: MurCD N-terminal domain domain: UDP-N-acetylmuramate-alanine ligase MurC species: Thermotoga maritima [TaxId: 2336]
Probab=95.93 E-value=0.012 Score=39.35 Aligned_cols=64 Identities=13% Similarity=0.035 Sum_probs=44.3
Q ss_pred CeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCch-hhhhhhhCCceEEEccCChhhHHhhccCceeeEE
Q 017914 60 NRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVM-KKKELEQSGFDVHLFNANETALMILTTLKNYTHL 127 (364)
Q Consensus 60 ~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~-~~~~l~~~~~~~~~~D~~~~~~~~~~~~d~v~~~ 127 (364)
|+|-++| .|-==+.|++.|+++|+.|.+-++... ....|+..++.++.+.-. +.+.+.|.|+..
T Consensus 2 ~~ihfiGIgG~GMs~LA~~L~~~G~~VsGSD~~~~~~t~~L~~~Gi~i~~gh~~----~~i~~~d~vV~S 67 (89)
T d1j6ua1 2 MKIHFVGIGGIGMSAVALHEFSNGNDVYGSNIEETERTAYLRKLGIPIFVPHSA----DNWYDPDLVIKT 67 (89)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHHHTTCCEESSCCT----TSCCCCSEEEEC
T ss_pred cEEEEEeECHHHHHHHHHHHHhCCCeEEEEeCCCChhHHHHHHCCCeEEeeecc----cccCCCCEEEEe
Confidence 7899998 443224689999999999999999753 344577788887654222 234566766543
|
| >d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Putative formate dehydrogenase species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]
Probab=95.91 E-value=0.0074 Score=46.50 Aligned_cols=62 Identities=15% Similarity=0.127 Sum_probs=46.4
Q ss_pred CCCCeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCChhhHHhhccCceeeEEEE
Q 017914 57 QSPNRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETALMILTTLKNYTHLLV 129 (364)
Q Consensus 57 ~~~~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~~~~~~~d~v~~~~~ 129 (364)
..+++|.|+|.|-||+.+++.|..-|.+|++.+|.+..... .. ..+ .+ +.+..+|+|+....
T Consensus 40 l~gk~vgIiG~G~IG~~va~~l~~~g~~v~~~d~~~~~~~~------~~-~~~---l~-ell~~sDiv~~~~p 101 (181)
T d1qp8a1 40 IQGEKVAVLGLGEIGTRVGKILAALGAQVRGFSRTPKEGPW------RF-TNS---LE-EALREARAAVCALP 101 (181)
T ss_dssp CTTCEEEEESCSTHHHHHHHHHHHTTCEEEEECSSCCCSSS------CC-BSC---SH-HHHTTCSEEEECCC
T ss_pred ccCceEEEeccccccccceeeeeccccccccccccccccce------ee-eec---hh-hhhhccchhhcccc
Confidence 55789999999999999999999999999999987543211 10 111 11 67888998887553
|
| >d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: N-terminal domain of adrenodoxin reductase-like domain: 2,4-dienoyl-CoA reductase, middle domain species: Escherichia coli [TaxId: 562]
Probab=95.86 E-value=0.0067 Score=46.63 Aligned_cols=38 Identities=18% Similarity=0.179 Sum_probs=34.2
Q ss_pred CCCCCeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCch
Q 017914 56 WQSPNRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVM 93 (364)
Q Consensus 56 ~~~~~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~ 93 (364)
...+++|+|+|+|..|-..+..|.++||+|+++.+.+.
T Consensus 40 ~~~~k~V~IIGaGPAGL~AA~~la~~G~~Vtl~E~~~~ 77 (179)
T d1ps9a3 40 AVQKKNLAVVGAGPAGLAFAINAAARGHQVTLFDAHSE 77 (179)
T ss_dssp CSSCCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSS
T ss_pred CCCCcEEEEECccHHHHHHHHHHHhhccceEEEeccCc
Confidence 35568999999999999999999999999999998754
|
| >d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Archaeon Sulfolobus solfataricus [TaxId: 2287]
Probab=95.84 E-value=0.0064 Score=46.31 Aligned_cols=72 Identities=17% Similarity=0.160 Sum_probs=50.5
Q ss_pred CCCCeEEEEc-CChhhHHHHHHHHhCC-CEEEEEEeCchhhhhhhhCCceEEEccCChhhH--Hhh-----ccCceeeEE
Q 017914 57 QSPNRMLILG-MGFVGRIFAEKIKNQG-WVVSGTCTNVMKKKELEQSGFDVHLFNANETAL--MIL-----TTLKNYTHL 127 (364)
Q Consensus 57 ~~~~~vlVtG-tG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~--~~~-----~~~d~v~~~ 127 (364)
..+.+|+|+| +|.+|...++.+...| .+|++.++++++.+.+.+.+.+.+ .|..+.+. ... ..+|.++.+
T Consensus 26 ~~g~~vlV~G~~G~vG~~~~~~~~~~g~~~V~~~~~~~~~~~~~~~~Ga~~~-i~~~~~~~~~~~~~~~~~~~~d~vid~ 104 (170)
T d1jvba2 26 DPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRAGADYV-INASMQDPLAEIRRITESKGVDAVIDL 104 (170)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHHHTCSEE-EETTTSCHHHHHHHHTTTSCEEEEEES
T ss_pred CCCCEEEEEeccccceeeeeecccccccccccccccchhhHHHHHHcCCcee-eccCCcCHHHHHHHHhhcccchhhhcc
Confidence 4457899999 8999999999999888 589999999888777766665432 23333322 111 346777776
Q ss_pred EE
Q 017914 128 LV 129 (364)
Q Consensus 128 ~~ 129 (364)
++
T Consensus 105 ~g 106 (170)
T d1jvba2 105 NN 106 (170)
T ss_dssp CC
T ss_pred cc
Confidence 53
|
| >d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Nicotinamide nucleotide transhydrogenase dI component species: Rhodospirillum rubrum [TaxId: 1085]
Probab=95.77 E-value=0.0088 Score=45.65 Aligned_cols=51 Identities=27% Similarity=0.372 Sum_probs=43.6
Q ss_pred CCeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEcc
Q 017914 59 PNRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFN 109 (364)
Q Consensus 59 ~~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D 109 (364)
.-+|+|+|.|..|.+-++.....|..|++++.+....+.+++.+..++..+
T Consensus 29 pa~VvViGaGvaG~~Aa~~A~~lGA~V~v~D~~~~~~~~l~~l~~~~i~~~ 79 (183)
T d1l7da1 29 PARVLVFGVGVAGLQAIATAKRLGAVVMATDVRAATKEQVESLGGKFITVD 79 (183)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCSTTHHHHHHTTCEECCC-
T ss_pred CcEEEEEcCcHHHHHHHHHHHHcCCEEEEEeccHHHHHHHHHhhcceEEEe
Confidence 358999999999999999999999999999999988888877666665443
|
| >d1yovb1 c.111.1.2 (B:12-437) UBA3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Activating enzymes of the ubiquitin-like proteins superfamily: Activating enzymes of the ubiquitin-like proteins family: Ubiquitin activating enzymes (UBA) domain: UBA3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.76 E-value=0.018 Score=50.56 Aligned_cols=70 Identities=11% Similarity=0.160 Sum_probs=48.0
Q ss_pred CCeEEEEcCChhhHHHHHHHHhCCC-EEEEEEeCchhhhhhh-------------------------hC--CceEEEccC
Q 017914 59 PNRMLILGMGFVGRIFAEKIKNQGW-VVSGTCTNVMKKKELE-------------------------QS--GFDVHLFNA 110 (364)
Q Consensus 59 ~~~vlVtGtG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~l~-------------------------~~--~~~~~~~D~ 110 (364)
..||||+|.|.+|..+++.|...|. ++++++.+.-....+. .+ .+..+..++
T Consensus 37 ~~kVlvvG~GglG~ei~k~L~~~Gvg~i~lvD~D~Ve~sNL~RQflf~~~diG~~Ka~~a~~~l~~~np~v~i~~~~~~i 116 (426)
T d1yovb1 37 TCKVLVIGAGGLGCELLKNLALSGFRQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKAEVAAEFLNDRVPNCNVVPHFNKI 116 (426)
T ss_dssp HCCEEEECSSTTHHHHHHHHHTTTCCCEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHSTTCCCEEECSCG
T ss_pred cCeEEEECCCHHHHHHHHHHHHcCCCeEEEEECCCcchhhhcccccCChhHcCcHHHHHHHHHHHhhCCCCceEeeeccc
Confidence 4689999999999999999999997 7888776432111110 02 345555666
Q ss_pred ChhhHHhhccCceeeEEE
Q 017914 111 NETALMILTTLKNYTHLL 128 (364)
Q Consensus 111 ~~~~~~~~~~~d~v~~~~ 128 (364)
.+.+...+.++|.|+.+.
T Consensus 117 ~~~~~~~~~~~DlVi~~~ 134 (426)
T d1yovb1 117 QDFNDTFYRQFHIIVCGL 134 (426)
T ss_dssp GGBCHHHHTTCSEEEECC
T ss_pred cchHHHHHHhcchheecc
Confidence 654445678889888654
|
| >d2g17a1 c.2.1.3 (A:1-153,A:309-334) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC species: Salmonella typhimurium [TaxId: 90371]
Probab=95.71 E-value=0.0043 Score=47.86 Aligned_cols=31 Identities=16% Similarity=0.334 Sum_probs=27.0
Q ss_pred CCeEEEEc-CChhhHHHHHHHHhC-CCEEEEEE
Q 017914 59 PNRMLILG-MGFVGRIFAEKIKNQ-GWVVSGTC 89 (364)
Q Consensus 59 ~~~vlVtG-tG~iG~~l~~~L~~~-g~~V~~~~ 89 (364)
|++|.|+| ||++|+.|++.|.++ .+++..+.
T Consensus 1 MikVaIiGATGyvG~eLlrlL~~HP~~ei~~l~ 33 (179)
T d2g17a1 1 MLNTLIVGASGYAGAELVSYVNRHPHMTITALT 33 (179)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHCTTEEEEEEE
T ss_pred CcEEEEECcccHHHHHHHHHHHhCCCCceEeeE
Confidence 68999999 999999999999997 56776654
|
| >d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Activating enzymes of the ubiquitin-like proteins superfamily: Activating enzymes of the ubiquitin-like proteins family: Molybdenum cofactor biosynthesis protein MoeB domain: Molybdenum cofactor biosynthesis protein MoeB species: Escherichia coli [TaxId: 562]
Probab=95.71 E-value=0.023 Score=46.05 Aligned_cols=34 Identities=21% Similarity=0.299 Sum_probs=29.0
Q ss_pred CCCeEEEEcCChhhHHHHHHHHhCCC-EEEEEEeC
Q 017914 58 SPNRMLILGMGFVGRIFAEKIKNQGW-VVSGTCTN 91 (364)
Q Consensus 58 ~~~~vlVtGtG~iG~~l~~~L~~~g~-~V~~~~r~ 91 (364)
...+|+|+|.|.+|++++..|...|. ++++++.+
T Consensus 29 ~~~~VliiG~GglGs~va~~La~~Gvg~i~lvD~D 63 (247)
T d1jw9b_ 29 KDSRVLIVGLGGLGCAASQYLASAGVGNLTLLDFD 63 (247)
T ss_dssp HHCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCC
T ss_pred hCCCEEEECCCHHHHHHHHHHHHcCCCeEEEECCc
Confidence 44799999999999999999999996 67777653
|
| >d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase species: Xanthobacter sp., py2 [TaxId: 35809]
Probab=95.69 E-value=0.0071 Score=43.13 Aligned_cols=37 Identities=5% Similarity=-0.002 Sum_probs=33.4
Q ss_pred CCCCeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCch
Q 017914 57 QSPNRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVM 93 (364)
Q Consensus 57 ~~~~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~ 93 (364)
..+++|+|+|+|++|-.++..|.+.|.+|+++.|.+.
T Consensus 20 ~~~~~vvVvGgG~ig~E~A~~l~~~g~~vt~i~~~~~ 56 (121)
T d1mo9a2 20 EPGSTVVVVGGSKTAVEYGCFFNATGRRTVMLVRTEP 56 (121)
T ss_dssp CCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCT
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhcchhheEeeccch
Confidence 3468999999999999999999999999999999754
|
| >d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Phenylalanine dehydrogenase species: Rhodococcus sp., M4 [TaxId: 1831]
Probab=95.63 E-value=0.0093 Score=46.66 Aligned_cols=67 Identities=16% Similarity=0.111 Sum_probs=49.3
Q ss_pred CCCCCeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCChhhHHhh-ccCceeeEEE
Q 017914 56 WQSPNRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETALMIL-TTLKNYTHLL 128 (364)
Q Consensus 56 ~~~~~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~~~~-~~~d~v~~~~ 128 (364)
...+++|+|-|-|.+|+++++.|.+.|.+|++.+.+..........+.+.+. .+ +.+ ..+|+++-++
T Consensus 24 ~L~gk~v~IqG~G~VG~~~A~~L~~~Gakvvv~d~d~~~~~~~~~~g~~~~~-----~~-~~~~~~~DI~iPcA 91 (201)
T d1c1da1 24 SLDGLTVLVQGLGAVGGSLASLAAEAGAQLLVADTDTERVAHAVALGHTAVA-----LE-DVLSTPCDVFAPCA 91 (201)
T ss_dssp CSTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEECC-----GG-GGGGCCCSEEEECS
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEecchHHHHHHHHhhcccccC-----cc-ccccccceeeeccc
Confidence 4677999999999999999999999999999998877766555444444321 11 233 4678766554
|
| >d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Garden pea (Pisum sativum) [TaxId: 3888]
Probab=95.63 E-value=0.0038 Score=44.89 Aligned_cols=37 Identities=16% Similarity=0.278 Sum_probs=33.4
Q ss_pred CCCeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCchh
Q 017914 58 SPNRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMK 94 (364)
Q Consensus 58 ~~~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~~ 94 (364)
..++++|+|+|+||-.++..|.+.|.+|+++.|++..
T Consensus 24 ~p~~~viiG~G~iglE~A~~~~~~G~~Vtvi~~~~~~ 60 (123)
T d1dxla2 24 IPKKLVVIGAGYIGLEMGSVWGRIGSEVTVVEFASEI 60 (123)
T ss_dssp CCSEEEESCCSHHHHHHHHHHHHHTCEEEEECSSSSS
T ss_pred cCCeEEEEccchHHHHHHHHHHhcCCeEEEEEEcccc
Confidence 3479999999999999999999999999999997654
|
| >d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Neisseria meningitidis [TaxId: 487]
Probab=95.61 E-value=0.0054 Score=44.15 Aligned_cols=35 Identities=20% Similarity=0.254 Sum_probs=32.2
Q ss_pred CCeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCch
Q 017914 59 PNRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVM 93 (364)
Q Consensus 59 ~~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~ 93 (364)
.++++|+|+|+||-.++..|.+.|.+|+.+.+.+.
T Consensus 26 p~~vvIiGgG~IG~E~A~~~~~~G~~Vtive~~~~ 60 (125)
T d1ojta2 26 PGKLLIIGGGIIGLEMGTVYSTLGSRLDVVEMMDG 60 (125)
T ss_dssp CSEEEEESCSHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred CCeEEEECCCHHHHHHHHHhhcCCCEEEEEEeecc
Confidence 47999999999999999999999999999998753
|
| >d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Dihydroxypyridine hydroxylase DhpH species: Arthrobacter nicotinovorans [TaxId: 29320]
Probab=95.59 E-value=0.0067 Score=49.51 Aligned_cols=36 Identities=17% Similarity=0.188 Sum_probs=32.7
Q ss_pred CCCeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCch
Q 017914 58 SPNRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVM 93 (364)
Q Consensus 58 ~~~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~ 93 (364)
..+||+|+|+|..|-.++..|.++|++|+++.|++.
T Consensus 3 ~~~kV~IiGaG~aGl~~A~~L~~~G~~v~v~Er~~~ 38 (265)
T d2voua1 3 TTDRIAVVGGSISGLTAALMLRDAGVDVDVYERSPQ 38 (265)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CCCcEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence 347999999999999999999999999999998654
|
| >d1o6za1 c.2.1.5 (A:22-162) Malate dehydrogenase {Archaeon Haloarcula marismortui [TaxId: 2238]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Archaeon Haloarcula marismortui [TaxId: 2238]
Probab=95.58 E-value=0.069 Score=38.95 Aligned_cols=65 Identities=12% Similarity=-0.086 Sum_probs=43.9
Q ss_pred eEEEEc-CChhhHHHHHHHHhCCC--EEEEEEeCc--hhhh----hhh-----hCCceEEEccCChhhHHhhccCceeeE
Q 017914 61 RMLILG-MGFVGRIFAEKIKNQGW--VVSGTCTNV--MKKK----ELE-----QSGFDVHLFNANETALMILTTLKNYTH 126 (364)
Q Consensus 61 ~vlVtG-tG~iG~~l~~~L~~~g~--~V~~~~r~~--~~~~----~l~-----~~~~~~~~~D~~~~~~~~~~~~d~v~~ 126 (364)
||.|+| +|.+|+.++-.|..+|. ++.+++... +... .+. .....+..+|+ +.+.++|.|+.
T Consensus 2 KV~IiGaaG~VG~~~A~~l~~~~l~~el~L~Di~~~~~~~~g~a~Dl~~~~~~~~~~~i~~~~~-----~~~~~aDiVvi 76 (142)
T d1o6za1 2 KVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQGGY-----EDTAGSDVVVI 76 (142)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEECCG-----GGGTTCSEEEE
T ss_pred eEEEECCCCcHHHHHHHHHHhCCCCCEEEEEecCCcccccceeecchhhcccccCCceEeeCCH-----HHhhhcCEEEE
Confidence 799999 89999999999999974 788888532 2211 121 12233333332 35679999998
Q ss_pred EEEe
Q 017914 127 LLVS 130 (364)
Q Consensus 127 ~~~~ 130 (364)
.++.
T Consensus 77 taG~ 80 (142)
T d1o6za1 77 TAGI 80 (142)
T ss_dssp CCCC
T ss_pred eccc
Confidence 8764
|
| >d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Formaldehyde dehydrogenase species: Pseudomonas putida [TaxId: 303]
Probab=95.57 E-value=0.052 Score=42.06 Aligned_cols=73 Identities=19% Similarity=0.145 Sum_probs=52.2
Q ss_pred CCCCCeEEEEcCChhhHHHHHHHHhCCC-EEEEEEeCchhhhhhhhCCceEEEccCChhhH----Hhh---ccCceeeEE
Q 017914 56 WQSPNRMLILGMGFVGRIFAEKIKNQGW-VVSGTCTNVMKKKELEQSGFDVHLFNANETAL----MIL---TTLKNYTHL 127 (364)
Q Consensus 56 ~~~~~~vlVtGtG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~----~~~---~~~d~v~~~ 127 (364)
...+.+|||+|+|.+|...+..+...|. +|++.++++.+.+...+.+...+. |..+.++ ..+ .++|.++.+
T Consensus 23 v~~G~tVlV~GaG~vGl~a~~~ak~~ga~~Vi~~d~~~~rl~~a~~~Ga~~~~-~~~~~~~~~~i~~~t~g~g~D~vid~ 101 (195)
T d1kola2 23 VGPGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLNPARLAHAKAQGFEIAD-LSLDTPLHEQIAALLGEPEVDCAVDA 101 (195)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCEEEE-TTSSSCHHHHHHHHHSSSCEEEEEEC
T ss_pred CCCCCEEEEECcCHHHHHHHHHHHhhcccceeeecccchhhHhhhhccccEEE-eCCCcCHHHHHHHHhCCCCcEEEEEC
Confidence 3456799999999999888888877776 888999998888777777776544 3333332 122 357888876
Q ss_pred EE
Q 017914 128 LV 129 (364)
Q Consensus 128 ~~ 129 (364)
++
T Consensus 102 vG 103 (195)
T d1kola2 102 VG 103 (195)
T ss_dssp CC
T ss_pred cc
Confidence 65
|
| >d1y7ta1 c.2.1.5 (A:0-153) Malate dehydrogenase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Thermus thermophilus [TaxId: 274]
Probab=95.48 E-value=0.01 Score=44.40 Aligned_cols=25 Identities=24% Similarity=0.408 Sum_probs=21.8
Q ss_pred CCCeEEEEc-CChhhHHHHHHHHhCC
Q 017914 58 SPNRMLILG-MGFVGRIFAEKIKNQG 82 (364)
Q Consensus 58 ~~~~vlVtG-tG~iG~~l~~~L~~~g 82 (364)
..|||.|+| +|++|++++-.|...+
T Consensus 3 ~p~KV~IiGA~G~VG~~~a~~l~~~~ 28 (154)
T d1y7ta1 3 APVRVAVTGAAGQIGYSLLFRIAAGE 28 (154)
T ss_dssp CCEEEEESSTTSHHHHHHHHHHHTTT
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhcc
Confidence 346999999 7999999999998865
|
| >d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: N-terminal domain of adrenodoxin reductase-like domain: Dihydropyrimidine dehydrogenase, domain 2 species: Pig (Sus scrofa) [TaxId: 9823]
Probab=95.45 E-value=0.0063 Score=47.26 Aligned_cols=35 Identities=14% Similarity=0.163 Sum_probs=31.6
Q ss_pred CCeEEEEcCChhhHHHHHHHHhCCC-EEEEEEeCch
Q 017914 59 PNRMLILGMGFVGRIFAEKIKNQGW-VVSGTCTNVM 93 (364)
Q Consensus 59 ~~~vlVtGtG~iG~~l~~~L~~~g~-~V~~~~r~~~ 93 (364)
++||+|+|+|..|-..+..|.++|+ +|+++.|++.
T Consensus 4 ~~kVaIIGaGpaGl~aA~~l~~~G~~~V~v~E~~~~ 39 (196)
T d1gtea4 4 SAKIALLGAGPASISCASFLARLGYSDITIFEKQEY 39 (196)
T ss_dssp GCCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSS
T ss_pred CCEEEEECChHHHHHHHHHHHHCCCCeEEEEEecCc
Confidence 4799999999999999999999998 5999998654
|
| >d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase AroE species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=95.44 E-value=0.0075 Score=46.32 Aligned_cols=41 Identities=20% Similarity=0.217 Sum_probs=35.8
Q ss_pred CCCCeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCchhhhhh
Q 017914 57 QSPNRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMKKKEL 98 (364)
Q Consensus 57 ~~~~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l 98 (364)
..+++|||+|+|..++.++..|.+.| +|+++.|+.++.+.+
T Consensus 16 ~~~k~vlIlGaGG~arai~~aL~~~~-~i~I~nR~~~ka~~l 56 (177)
T d1nvta1 16 VKDKNIVIYGAGGAARAVAFELAKDN-NIIIANRTVEKAEAL 56 (177)
T ss_dssp CCSCEEEEECCSHHHHHHHHHHTSSS-EEEEECSSHHHHHHH
T ss_pred cCCCEEEEECCcHHHHHHHHHHcccc-ceeeehhhhhHHHHH
Confidence 45689999999999999999998777 999999998887655
|
| >d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Mouse (Mus musculus), class II [TaxId: 10090]
Probab=95.41 E-value=0.017 Score=44.11 Aligned_cols=73 Identities=14% Similarity=0.007 Sum_probs=51.6
Q ss_pred CCCCeEEEEcCChhhHHHHHHHHhCCC-EEEEEEeCchhhhhhhhCCceEEE-ccCChhhH----H--hhccCceeeEEE
Q 017914 57 QSPNRMLILGMGFVGRIFAEKIKNQGW-VVSGTCTNVMKKKELEQSGFDVHL-FNANETAL----M--ILTTLKNYTHLL 128 (364)
Q Consensus 57 ~~~~~vlVtGtG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~l~~~~~~~~~-~D~~~~~~----~--~~~~~d~v~~~~ 128 (364)
..+.+|+|+|+|.||...++.+...|. .|++.++++++.+..++.+...+. ..-.+... . .-.++|.++.++
T Consensus 27 ~~G~~VlV~G~G~iGl~a~~~ak~~Ga~~Vi~~d~~~~r~~~a~~~Ga~~~i~~~~~~~~~~~~~~~~~~~G~d~vie~~ 106 (174)
T d1e3ia2 27 TPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKALGATDCLNPRELDKPVQDVITELTAGGVDYSLDCA 106 (174)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHHTSCBSEEEESS
T ss_pred CCCCEEEEECCChHHHHHHHHHHHhCCceeeeeccchHHHHHHHHhCCCcccCCccchhhhhhhHhhhhcCCCcEEEEec
Confidence 456799999999999999999999997 688888888887766666665443 22222111 1 125678888876
Q ss_pred E
Q 017914 129 V 129 (364)
Q Consensus 129 ~ 129 (364)
+
T Consensus 107 G 107 (174)
T d1e3ia2 107 G 107 (174)
T ss_dssp C
T ss_pred c
Confidence 4
|
| >d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Siroheme synthase N-terminal domain-like domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=95.41 E-value=0.0085 Score=44.59 Aligned_cols=36 Identities=22% Similarity=0.256 Sum_probs=32.5
Q ss_pred CCCCCeEEEEcCChhhHHHHHHHHhCCCEEEEEEeC
Q 017914 56 WQSPNRMLILGMGFVGRIFAEKIKNQGWVVSGTCTN 91 (364)
Q Consensus 56 ~~~~~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~ 91 (364)
...+++|||+|+|.+|..-++.|++.|.+|++++..
T Consensus 10 ~l~gkrvLViGgG~va~~ka~~Ll~~GA~VtVvap~ 45 (150)
T d1kyqa1 10 QLKDKRILLIGGGEVGLTRLYKLMPTGCKLTLVSPD 45 (150)
T ss_dssp CCTTCEEEEEEESHHHHHHHHHHGGGTCEEEEEEEE
T ss_pred eeCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 356799999999999999999999999999999753
|
| >d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Horse (Equus caballus) [TaxId: 9796]
Probab=95.40 E-value=0.017 Score=44.15 Aligned_cols=73 Identities=14% Similarity=0.054 Sum_probs=50.7
Q ss_pred CCCCeEEEEcCChhhHHHHHHHHhCC-CEEEEEEeCchhhhhhhhCCceEEEc--cCChhhH---H--hhccCceeeEEE
Q 017914 57 QSPNRMLILGMGFVGRIFAEKIKNQG-WVVSGTCTNVMKKKELEQSGFDVHLF--NANETAL---M--ILTTLKNYTHLL 128 (364)
Q Consensus 57 ~~~~~vlVtGtG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~l~~~~~~~~~~--D~~~~~~---~--~~~~~d~v~~~~ 128 (364)
..+.+|||.|.|.+|...+..+...| .+|++.++++++.+...+.+...... |..+... . .-.++|+++.+.
T Consensus 27 k~GdtVlV~GaGG~G~~~~~~~~~~g~~~Vi~~~~~~~k~~~a~~~Ga~~~i~~~~~~~~~~~~~~~~~~~G~D~vid~~ 106 (176)
T d2jhfa2 27 TQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVNPQDYKKPIQEVLTEMSNGGVDFSFEVI 106 (176)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHTTSCBSEEEECS
T ss_pred CCCCEEEEECCCCcHHHHHHHHHHcCCceEEeecCcHHHHHHHHHhCCeeEEecCCchhHHHHHHHHHhcCCCCEEEecC
Confidence 45678999998789999999999997 58999999998887776666554332 2222111 1 114678777765
Q ss_pred E
Q 017914 129 V 129 (364)
Q Consensus 129 ~ 129 (364)
+
T Consensus 107 G 107 (176)
T d2jhfa2 107 G 107 (176)
T ss_dssp C
T ss_pred C
Confidence 4
|
| >d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: D-2-hydroxyisocaproate dehydrogenase species: Lactobacillus casei [TaxId: 1582]
Probab=95.39 E-value=0.0078 Score=47.14 Aligned_cols=63 Identities=16% Similarity=0.169 Sum_probs=45.2
Q ss_pred CCCCeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCChhhHHhhccCceeeEEE
Q 017914 57 QSPNRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETALMILTTLKNYTHLL 128 (364)
Q Consensus 57 ~~~~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~~~~~~~d~v~~~~ 128 (364)
..+++|.|+|.|-||+.+++.|..-|.+|++.++....... .... ..+.+ +.+..+|.|+...
T Consensus 43 l~~ktvgIiG~G~IG~~va~~l~~fg~~v~~~d~~~~~~~~---~~~~-----~~~l~-~l~~~~D~v~~~~ 105 (199)
T d1dxya1 43 LGQQTVGVMGTGHIGQVAIKLFKGFGAKVIAYDPYPMKGDH---PDFD-----YVSLE-DLFKQSDVIDLHV 105 (199)
T ss_dssp GGGSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCSSCC---TTCE-----ECCHH-HHHHHCSEEEECC
T ss_pred ccceeeeeeecccccccccccccccceeeeccCCccchhhh---cchh-----HHHHH-HHHHhcccceeee
Confidence 34689999999999999999999999999999986543221 1111 11222 5667788777655
|
| >d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: D-lactate dehydrogenase species: Lactobacillus helveticus [TaxId: 1587]
Probab=95.39 E-value=0.0064 Score=47.53 Aligned_cols=64 Identities=13% Similarity=0.143 Sum_probs=44.7
Q ss_pred CCCCeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCChhhHHhhccCceeeEEE
Q 017914 57 QSPNRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETALMILTTLKNYTHLL 128 (364)
Q Consensus 57 ~~~~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~~~~~~~d~v~~~~ 128 (364)
..+++|.|+|.|.||+.+++.|..-|.+|++.++........ .+.. ..+.+ +.+..+|+|+...
T Consensus 41 l~gk~vgIiG~G~IG~~va~~l~~fg~~V~~~d~~~~~~~~~--~~~~-----~~~l~-~~l~~sDii~~~~ 104 (197)
T d1j4aa1 41 VRDQVVGVVGTGHIGQVFMQIMEGFGAKVITYDIFRNPELEK--KGYY-----VDSLD-DLYKQADVISLHV 104 (197)
T ss_dssp GGGSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCHHHHH--TTCB-----CSCHH-HHHHHCSEEEECS
T ss_pred ccCCeEEEecccccchhHHHhHhhhcccccccCccccccccc--ceee-----ecccc-ccccccccccccC
Confidence 346899999999999999999999999999998764432221 1211 11111 5667788776654
|
| >d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase, N-terminal domain {Klebsiella pneumoniae [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: UDP-galactopyranose mutase, N-terminal domain domain: UDP-galactopyranose mutase, N-terminal domain species: Klebsiella pneumoniae [TaxId: 573]
Probab=95.32 E-value=0.0094 Score=50.39 Aligned_cols=35 Identities=23% Similarity=0.451 Sum_probs=32.0
Q ss_pred CCeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCch
Q 017914 59 PNRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVM 93 (364)
Q Consensus 59 ~~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~ 93 (364)
+|+|+|+|+|.-|-..|..|.++|++|.++.++..
T Consensus 2 ~KKI~IIGaG~sGL~aA~~L~k~G~~V~viEk~~~ 36 (314)
T d2bi7a1 2 SKKILIVGAGFSGAVIGRQLAEKGHQVHIIDQRDH 36 (314)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSS
T ss_pred CCEEEEECCcHHHHHHHHHHHhCCCCEEEEECCCC
Confidence 58999999999999999999999999999988653
|
| >d2dt5a2 c.2.1.12 (A:78-203) Transcriptional repressor Rex, C-terminal domain {Thermus aquaticus [TaxId: 271]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Transcriptional repressor Rex, C-terminal domain domain: Transcriptional repressor Rex, C-terminal domain species: Thermus aquaticus [TaxId: 271]
Probab=95.24 E-value=0.018 Score=41.26 Aligned_cols=92 Identities=11% Similarity=0.048 Sum_probs=52.7
Q ss_pred CeEEEEcCChhhHHHHHHHHh-CCCEEEEEEeCchhhhhhhhCCceEEEccCChhhHHhh-ccCceeeEEEEecCCCCCC
Q 017914 60 NRMLILGMGFVGRIFAEKIKN-QGWVVSGTCTNVMKKKELEQSGFDVHLFNANETALMIL-TTLKNYTHLLVSIPPLEGT 137 (364)
Q Consensus 60 ~~vlVtGtG~iG~~l~~~L~~-~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~~~~-~~~d~v~~~~~~~~~~~~~ 137 (364)
.+|+|.|+|.+|+.|++++.. .|++++++.-+........-.|+.++..| +.+ ... +.++.++..+
T Consensus 4 ~~v~I~GaG~~G~~l~~~l~~~~~~~iv~fiDdd~~k~G~~I~Gi~V~~~~--~l~-~~~~~~i~iai~~i--------- 71 (126)
T d2dt5a2 4 WGLCIVGMGRLGSALADYPGFGESFELRGFFDVDPEKVGRPVRGGVIEHVD--LLP-QRVPGRIEIALLTV--------- 71 (126)
T ss_dssp EEEEEECCSHHHHHHHHCSCCCSSEEEEEEEESCTTTTTCEETTEEEEEGG--GHH-HHSTTTCCEEEECS---------
T ss_pred ceEEEEcCCHHHHHHHHhHhhcCCcEEEEEEeCchHhcCCEECCEEEecHH--HHH-HHHhhcccEEEEeC---------
Confidence 489999999999999998754 47899988765433222222466665433 222 222 2222211111
Q ss_pred CChhhhHHHHHHHHhhcCCccEEEEEccc
Q 017914 138 GDPMLKHGELLRSTLMNGHLQWLGYLSST 166 (364)
Q Consensus 138 ~~~~~~~~~~l~~a~~~~~~~r~v~~Ss~ 166 (364)
. ......+.+.+.+.|++.+.-++..
T Consensus 72 ~---~~~~~~I~d~l~~~gIk~I~~f~~~ 97 (126)
T d2dt5a2 72 P---REAAQKAADLLVAAGIKGILNFAPV 97 (126)
T ss_dssp C---HHHHHHHHHHHHHHTCCEEEECSSS
T ss_pred C---HHHHHHHHHHHHHcCCCEEeecCce
Confidence 1 1223445666667789877766543
|
| >d1vkna1 c.2.1.3 (A:1-144,A:308-339) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC species: Thermotoga maritima [TaxId: 2336]
Probab=95.24 E-value=0.0095 Score=45.52 Aligned_cols=33 Identities=21% Similarity=0.267 Sum_probs=27.4
Q ss_pred CCeEEEEc-CChhhHHHHHHHHhCC-CEEEEEEeC
Q 017914 59 PNRMLILG-MGFVGRIFAEKIKNQG-WVVSGTCTN 91 (364)
Q Consensus 59 ~~~vlVtG-tG~iG~~l~~~L~~~g-~~V~~~~r~ 91 (364)
|++|.|+| ||++|+.|++.|.++- .++..+..+
T Consensus 1 MikVaIvGATGyvG~eLirlL~~HP~~ei~~l~s~ 35 (176)
T d1vkna1 1 MIRAGIIGATGYTGLELVRLLKNHPEAKITYLSSR 35 (176)
T ss_dssp CEEEEEESTTSHHHHHHHHHHHHCTTEEEEEEECS
T ss_pred CeEEEEECCCcHHHHHHHHHHHhCCCceEEEeecc
Confidence 57999999 9999999999999864 577776543
|
| >d2cvoa1 c.2.1.3 (A:68-218,A:384-415) Putative semialdehyde dehydrogenase {Rice (Oryza sativa) [TaxId: 4530]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Putative semialdehyde dehydrogenase species: Rice (Oryza sativa) [TaxId: 4530]
Probab=95.23 E-value=0.0035 Score=48.58 Aligned_cols=33 Identities=18% Similarity=0.375 Sum_probs=27.1
Q ss_pred CCCeEEEEc-CChhhHHHHHHHHhCC-CEEEEEEe
Q 017914 58 SPNRMLILG-MGFVGRIFAEKIKNQG-WVVSGTCT 90 (364)
Q Consensus 58 ~~~~vlVtG-tG~iG~~l~~~L~~~g-~~V~~~~r 90 (364)
.+.||.|+| ||++|+.|++.|.++- .++..+..
T Consensus 4 ~kikVaIlGATGyvG~elirLL~~HP~~ei~~l~S 38 (183)
T d2cvoa1 4 EEVRIAVLGASGYTGAEIVRLLANHPQFRIKVMTA 38 (183)
T ss_dssp SCEEEEEESCSSHHHHHHHHHHTTCSSEEEEEEEC
T ss_pred CccEEEEECcccHHHHHHHHHHHhCCCceEEEEec
Confidence 456899999 9999999999999874 57766653
|
| >d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Human (Homo sapiens), different isozymes [TaxId: 9606]
Probab=95.10 E-value=0.02 Score=43.75 Aligned_cols=72 Identities=14% Similarity=0.155 Sum_probs=51.2
Q ss_pred CCCCeEEEEcCChhhHHHHHHHHhCC-CEEEEEEeCchhhhhhhhCCceEEEccCChhh-----H-Hhh--ccCceeeEE
Q 017914 57 QSPNRMLILGMGFVGRIFAEKIKNQG-WVVSGTCTNVMKKKELEQSGFDVHLFNANETA-----L-MIL--TTLKNYTHL 127 (364)
Q Consensus 57 ~~~~~vlVtGtG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~-----~-~~~--~~~d~v~~~ 127 (364)
..+.+|+|+|.|.+|...++.+...| .+|+++++++++.+...+.+.+.+. |..+.+ . +.. .++|.++.+
T Consensus 28 ~~g~tVlI~G~GgvGl~ai~~ak~~G~~~Vi~vd~~~~kl~~Ak~~GA~~~i-n~~~~~~~~~~~~~~~~g~G~d~vi~~ 106 (176)
T d1d1ta2 28 KPGSTCVVFGLGGVGLSVIMGCKSAGASRIIGIDLNKDKFEKAMAVGATECI-SPKDSTKPISEVLSEMTGNNVGYTFEV 106 (176)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHHTCSEEE-CGGGCSSCHHHHHHHHHTSCCCEEEEC
T ss_pred CCCCEEEEECCCchhHHHHHHHHHcCCceEEEecCcHHHHHHHHhcCCcEEE-CccccchHHHHHHHHhccccceEEEEe
Confidence 44578999999999999999999999 5899999999887766666665433 222221 1 111 457777776
Q ss_pred EE
Q 017914 128 LV 129 (364)
Q Consensus 128 ~~ 129 (364)
.+
T Consensus 107 ~g 108 (176)
T d1d1ta2 107 IG 108 (176)
T ss_dssp SC
T ss_pred CC
Confidence 53
|
| >d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Archaeon Aeropyrum pernix [TaxId: 56636]
Probab=95.10 E-value=0.021 Score=43.36 Aligned_cols=72 Identities=18% Similarity=0.117 Sum_probs=48.1
Q ss_pred CCCCeEEEEcCChhhHHHHHHHHhCCC-EEEEEEeCchhhhhhhhCCceEEEccCChhhH----Hhh--ccCceeeEEEE
Q 017914 57 QSPNRMLILGMGFVGRIFAEKIKNQGW-VVSGTCTNVMKKKELEQSGFDVHLFNANETAL----MIL--TTLKNYTHLLV 129 (364)
Q Consensus 57 ~~~~~vlVtGtG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~----~~~--~~~d~v~~~~~ 129 (364)
..+.+|||.|+|.+|...++.+...|. .|++.++++++.+...+.+...+ .|..+... +.. .++|.|+.+++
T Consensus 31 ~~g~~vli~GaG~vG~~~~~~a~~~g~~~vv~~~~~~~k~~~~~~~ga~~~-i~~~~~~~~~~~~~~~~~g~d~vid~~g 109 (172)
T d1h2ba2 31 YPGAYVAIVGVGGLGHIAVQLLKVMTPATVIALDVKEEKLKLAERLGADHV-VDARRDPVKQVMELTRGRGVNVAMDFVG 109 (172)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHHHTTCSEE-EETTSCHHHHHHHHTTTCCEEEEEESSC
T ss_pred CCCCEEEEeCCChHHHHHHHHHHhhcCcccccccchhHHHHHHhhccccee-ecCcccHHHHHHHhhCCCCceEEEEecC
Confidence 345789999999999999998888774 77778888877777666555432 23333222 111 34677776654
|
| >d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Phosphoglycerate dehydrogenase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=95.09 E-value=0.02 Score=44.14 Aligned_cols=66 Identities=17% Similarity=0.225 Sum_probs=46.7
Q ss_pred CCCCeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCChhhHHhhccCceeeEEEE
Q 017914 57 QSPNRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETALMILTTLKNYTHLLV 129 (364)
Q Consensus 57 ~~~~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~~~~~~~d~v~~~~~ 129 (364)
..++++.|+|.|.||+.+++.|..-|.+|++.++...+..... .++.. .+ .+ +.+..+|+|+....
T Consensus 42 l~~k~vgiiG~G~IG~~va~~~~~fg~~v~~~d~~~~~~~~~~-~~~~~--~~---l~-ell~~sDiv~~~~P 107 (184)
T d1ygya1 42 IFGKTVGVVGLGRIGQLVAQRIAAFGAYVVAYDPYVSPARAAQ-LGIEL--LS---LD-DLLARADFISVHLP 107 (184)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHTTTCEEEEECTTSCHHHHHH-HTCEE--CC---HH-HHHHHCSEEEECCC
T ss_pred ccceeeeeccccchhHHHHHHhhhccceEEeecCCCChhHHhh-cCcee--cc---HH-HHHhhCCEEEEcCC
Confidence 4568999999999999999999999999999998654433221 22222 11 11 56778888776553
|
| >d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Phosphoglycerate dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=95.09 E-value=0.053 Score=41.72 Aligned_cols=37 Identities=16% Similarity=0.155 Sum_probs=33.4
Q ss_pred CCCCeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCch
Q 017914 57 QSPNRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVM 93 (364)
Q Consensus 57 ~~~~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~ 93 (364)
..+++|.|+|.|.||+.+++.|..-|.+|++.++...
T Consensus 42 l~~~~vgiiG~G~IG~~va~~l~~fg~~v~~~d~~~~ 78 (188)
T d1sc6a1 42 ARGKKLGIIGYGHIGTQLGILAESLGMYVYFYDIENK 78 (188)
T ss_dssp STTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred ccceEEEEeecccchhhhhhhcccccceEeecccccc
Confidence 4578999999999999999999999999999998643
|
| >d5mdha1 c.2.1.5 (A:1-154) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Pig (Sus scrofa) [TaxId: 9823]
Probab=95.08 E-value=0.026 Score=41.98 Aligned_cols=75 Identities=13% Similarity=0.026 Sum_probs=43.2
Q ss_pred CCeEEEEc-CChhhHHHHHHHHhCCC-------EEEEEEeCchh--hhhhh----hCC-ceEEEccCChhhHHhhccCce
Q 017914 59 PNRMLILG-MGFVGRIFAEKIKNQGW-------VVSGTCTNVMK--KKELE----QSG-FDVHLFNANETALMILTTLKN 123 (364)
Q Consensus 59 ~~~vlVtG-tG~iG~~l~~~L~~~g~-------~V~~~~r~~~~--~~~l~----~~~-~~~~~~D~~~~~~~~~~~~d~ 123 (364)
.+||.|+| +|.+|++++-.|...+- +++.++.+... ...+. ... .........+.....+++.|+
T Consensus 3 p~KV~IiGA~G~VG~~la~~l~~~~~~~~~~~~~L~l~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv 82 (154)
T d5mdha1 3 PIRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALPLLKDVIATDKEEIAFKDLDV 82 (154)
T ss_dssp CEEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCCTTEEEEEEESCHHHHTTTCSE
T ss_pred ceEEEEECCCCHHHHHHHHHHHHHHhcCCCCccEEEEecCccchhhhhhhhhhhcccccccccccccCcccccccCCceE
Confidence 47999999 79999999999886531 34444443321 11111 111 111122222222267889999
Q ss_pred eeEEEEecCC
Q 017914 124 YTHLLVSIPP 133 (364)
Q Consensus 124 v~~~~~~~~~ 133 (364)
|+..++....
T Consensus 83 VVitag~~~~ 92 (154)
T d5mdha1 83 AILVGSMPRR 92 (154)
T ss_dssp EEECCSCCCC
T ss_pred EEEecccCCC
Confidence 9988865443
|
| >d1pjza_ c.66.1.36 (A:) Thiopurine S-methyltransferase {Pseudomonas syringae [TaxId: 317]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Thiopurine S-methyltransferase domain: Thiopurine S-methyltransferase species: Pseudomonas syringae [TaxId: 317]
Probab=95.07 E-value=0.017 Score=44.70 Aligned_cols=95 Identities=12% Similarity=0.034 Sum_probs=55.3
Q ss_pred CCCCeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhh-------------------CCceEEEccCChhhHHh
Q 017914 57 QSPNRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQ-------------------SGFDVHLFNANETALMI 117 (364)
Q Consensus 57 ~~~~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~-------------------~~~~~~~~D~~~~~~~~ 117 (364)
..+.+||.+|+|. |+ .+..|+++|++|++++.++.-.+...+ ....++.+|..+.....
T Consensus 19 ~~~~rvLd~GCG~-G~-~a~~la~~G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~ 96 (201)
T d1pjza_ 19 VPGARVLVPLCGK-SQ-DMSWLSGQGYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFALTARD 96 (201)
T ss_dssp CTTCEEEETTTCC-SH-HHHHHHHHCCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSSTHHH
T ss_pred CCCCEEEEecCcC-CH-HHHHHHHcCCceEeecccHHHHHHHHHHhccccchhhhhhhhhccccccceeccccccccccc
Confidence 4567999999664 44 555777789999999998765443321 23467778887755434
Q ss_pred hccCceeeEEEEecCCCCCCCChhhhHHHHHHHHhhcCC
Q 017914 118 LTTLKNYTHLLVSIPPLEGTGDPMLKHGELLRSTLMNGH 156 (364)
Q Consensus 118 ~~~~d~v~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~ 156 (364)
...+|.|+........ ..+.......++...++..|
T Consensus 97 ~~~~D~i~~~~~l~~l---~~~~~~~~~~~i~~~LkpgG 132 (201)
T d1pjza_ 97 IGHCAAFYDRAAMIAL---PADMRERYVQHLEALMPQAC 132 (201)
T ss_dssp HHSEEEEEEESCGGGS---CHHHHHHHHHHHHHHSCSEE
T ss_pred ccceeEEEEEeeeEec---chhhhHHHHHHHHHhcCCCc
Confidence 4556666443221110 01122334456666665554
|
| >d2gz1a1 c.2.1.3 (A:2-127,A:330-357) Aspartate beta-semialdehyde dehydrogenase {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Aspartate beta-semialdehyde dehydrogenase species: Streptococcus pneumoniae [TaxId: 1313]
Probab=95.04 E-value=0.024 Score=42.27 Aligned_cols=23 Identities=17% Similarity=0.390 Sum_probs=20.9
Q ss_pred eEEEEc-CChhhHHHHHHHHhCCC
Q 017914 61 RMLILG-MGFVGRIFAEKIKNQGW 83 (364)
Q Consensus 61 ~vlVtG-tG~iG~~l~~~L~~~g~ 83 (364)
+|.|+| ||++|+.|++.|.++.+
T Consensus 3 kVaIvGATGyvG~eLirlL~~H~f 26 (154)
T d2gz1a1 3 TVAVVGATGAVGAQMIKMLEESTL 26 (154)
T ss_dssp EEEEETTTSHHHHHHHHHHHTCCS
T ss_pred EEEEECCCcHHHHHHHHHHHcCCC
Confidence 799999 99999999999988864
|
| >d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Glycine oxidase ThiO species: Bacillus sp. [TaxId: 1409]
Probab=94.96 E-value=0.0095 Score=49.00 Aligned_cols=31 Identities=13% Similarity=0.195 Sum_probs=29.6
Q ss_pred EEEEcCChhhHHHHHHHHhCCCEEEEEEeCc
Q 017914 62 MLILGMGFVGRIFAEKIKNQGWVVSGTCTNV 92 (364)
Q Consensus 62 vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~ 92 (364)
|+|+|+|.+|..++.+|.++|++|+++.+..
T Consensus 7 vvIIGaGi~Gls~A~~La~~G~~V~vlE~~~ 37 (276)
T d1ryia1 7 AVVIGGGIIGSAIAYYLAKENKNTALFESGT 37 (276)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred EEEECcCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 9999999999999999999999999999864
|
| >d7mdha1 c.2.1.5 (A:23-197) Malate dehydrogenase {Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]
Probab=94.88 E-value=0.047 Score=41.48 Aligned_cols=72 Identities=8% Similarity=0.023 Sum_probs=42.5
Q ss_pred CeEEEEc-CChhhHHHHHHHHhCC---C----EEEEEEeCchhh--hh----hhhCCc-eEEEccCChhhHHhhccCcee
Q 017914 60 NRMLILG-MGFVGRIFAEKIKNQG---W----VVSGTCTNVMKK--KE----LEQSGF-DVHLFNANETALMILTTLKNY 124 (364)
Q Consensus 60 ~~vlVtG-tG~iG~~l~~~L~~~g---~----~V~~~~r~~~~~--~~----l~~~~~-~~~~~D~~~~~~~~~~~~d~v 124 (364)
.+|.|+| +|.||++++-.|.+.+ . +++.++...... .. +..... .....-.++...+.+++.|+|
T Consensus 25 ~kV~I~GA~G~Ig~~l~~~La~g~v~g~~~~i~L~L~di~~~~~~l~g~~mdl~d~a~~~~~~~~~~~~~~~~~~~aDvV 104 (175)
T d7mdha1 25 VNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELEDSLYPLLREVSIGIDPYEVFEDVDWA 104 (175)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEEESCHHHHTTTCSEE
T ss_pred cEEEEECCCcHHHHHHHHHHHcCcccCCCceEEEEEecCccccchhcchhhhhcccccccccCccccccchhhccCCceE
Confidence 4899999 7999999999998753 2 455555543221 11 111110 111112222223688999999
Q ss_pred eEEEEec
Q 017914 125 THLLVSI 131 (364)
Q Consensus 125 ~~~~~~~ 131 (364)
+.+++..
T Consensus 105 vi~ag~~ 111 (175)
T d7mdha1 105 LLIGAKP 111 (175)
T ss_dssp EECCCCC
T ss_pred EEeeccC
Confidence 9998664
|
| >d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: S-adenosylhomocystein hydrolase species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]
Probab=94.87 E-value=0.022 Score=42.34 Aligned_cols=69 Identities=22% Similarity=0.165 Sum_probs=51.1
Q ss_pred CCCCCeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCChhhHHhhccCceeeEEEEe
Q 017914 56 WQSPNRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETALMILTTLKNYTHLLVS 130 (364)
Q Consensus 56 ~~~~~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~~~~~~~d~v~~~~~~ 130 (364)
...+|+++|.|=|.+|+-+++.|...|.+|++...+|-+.-+..-++.++...+ +++...|.++-..++
T Consensus 20 ~laGk~vvV~GYG~vGrG~A~~~rg~Ga~V~V~E~DPi~alqA~mdGf~v~~~~------~a~~~aDi~vTaTGn 88 (163)
T d1v8ba1 20 LISGKIVVICGYGDVGKGCASSMKGLGARVYITEIDPICAIQAVMEGFNVVTLD------EIVDKGDFFITCTGN 88 (163)
T ss_dssp CCTTSEEEEECCSHHHHHHHHHHHHHTCEEEEECSCHHHHHHHHTTTCEECCHH------HHTTTCSEEEECCSS
T ss_pred eecCCEEEEecccccchhHHHHHHhCCCEEEEEecCchhhHHHHhcCCccCchh------HccccCcEEEEcCCC
Confidence 456799999999999999999999999999999998866443333555543221 566677777765543
|
| >d2ivda1 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen oxidase {Myxococcus xanthus [TaxId: 34]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Protoporphyrinogen oxidase species: Myxococcus xanthus [TaxId: 34]
Probab=94.83 E-value=0.0093 Score=49.54 Aligned_cols=33 Identities=15% Similarity=0.216 Sum_probs=30.9
Q ss_pred CeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCc
Q 017914 60 NRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNV 92 (364)
Q Consensus 60 ~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~ 92 (364)
|+|+|+|+|.-|-..+..|.++|++|+++-+++
T Consensus 1 m~V~IIGaG~aGL~aA~~L~~~G~~V~vlE~~~ 33 (347)
T d2ivda1 1 MNVAVVGGGISGLAVAHHLRSRGTDAVLLESSA 33 (347)
T ss_dssp CCEEEECCBHHHHHHHHHHHTTTCCEEEECSSS
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCCEEEEecCC
Confidence 689999999999999999999999999998864
|
| >d1f06a1 c.2.1.3 (A:1-118,A:269-320) Diaminopimelic acid dehydrogenase (DAPDH) {Corynebacterium glutamicum [TaxId: 1718]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Diaminopimelic acid dehydrogenase (DAPDH) species: Corynebacterium glutamicum [TaxId: 1718]
Probab=94.80 E-value=0.029 Score=42.52 Aligned_cols=33 Identities=27% Similarity=0.392 Sum_probs=27.3
Q ss_pred CCeEEEEcCChhhHHHHHHHHhC-CCEEEEEEeC
Q 017914 59 PNRMLILGMGFVGRIFAEKIKNQ-GWVVSGTCTN 91 (364)
Q Consensus 59 ~~~vlVtGtG~iG~~l~~~L~~~-g~~V~~~~r~ 91 (364)
++||.|+|+|.+|+.+++.|.+. +.+++++...
T Consensus 3 kirvgiiG~G~ig~~~~~~l~~~~~~elvav~~~ 36 (170)
T d1f06a1 3 NIRVAIVGYGNLGRSVEKLIAKQPDMDLVGIFSR 36 (170)
T ss_dssp CEEEEEECCSHHHHHHHHHHTTCSSEEEEEEEES
T ss_pred cceEEEECChHHHHHHHHHHHhCCCcEEEEEEec
Confidence 46899999999999999999886 6787766543
|
| >d1a9xa4 c.30.1.1 (A:556-676) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: BC N-terminal domain-like domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains species: Escherichia coli [TaxId: 562]
Probab=94.77 E-value=0.066 Score=37.44 Aligned_cols=39 Identities=13% Similarity=0.231 Sum_probs=33.2
Q ss_pred CCCeEEEEcCC-----------hhhHHHHHHHHhCCCEEEEEEeCchhhh
Q 017914 58 SPNRMLILGMG-----------FVGRIFAEKIKNQGWVVSGTCTNVMKKK 96 (364)
Q Consensus 58 ~~~~vlVtGtG-----------~iG~~l~~~L~~~g~~V~~~~r~~~~~~ 96 (364)
..++|||+|+| +.+.+.++.|.+.|++++.+.-++....
T Consensus 3 ~~kkvlViGsGp~rIGq~~EfDy~~~~a~~aLk~~g~~~IliN~NPeTVs 52 (121)
T d1a9xa4 3 DREKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNCNPETVS 52 (121)
T ss_dssp SSCEEEEECCCSCBTTBCHHHHHHHHHHHHHHHHTTCEEEEECCCTTSST
T ss_pred CCCEEEEECCCcCcccccchhhHHHHHHHHHHHhcCCeEEEEecChhhhh
Confidence 35799999976 6788999999999999999998876543
|
| >d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Formate dehydrogenase species: Pseudomonas sp., strain 101 [TaxId: 306]
Probab=94.74 E-value=0.036 Score=42.73 Aligned_cols=69 Identities=6% Similarity=-0.092 Sum_probs=46.5
Q ss_pred CCCCCeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCChhhHHhhccCceeeEEEE
Q 017914 56 WQSPNRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETALMILTTLKNYTHLLV 129 (364)
Q Consensus 56 ~~~~~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~~~~~~~d~v~~~~~ 129 (364)
...+++|.|+|.|.||+.+++.|..-|.+|.+.+|...........++.. ..+.+ +.++.+|.|+....
T Consensus 41 ~l~~~~vgiiG~G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~~~~~~~----~~~l~-~~l~~sD~v~~~~p 109 (188)
T d2naca1 41 DLEAMHVGTVAAGRIGLAVLRRLAPFDVHLHYTDRHRLPESVEKELNLTW----HATRE-DMYPVCDVVTLNCP 109 (188)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHGGGTCEEEEECSSCCCHHHHHHHTCEE----CSSHH-HHGGGCSEEEECSC
T ss_pred eccccceeeccccccchhhhhhhhccCceEEEEeeccccccccccccccc----cCCHH-HHHHhccchhhccc
Confidence 34578999999999999999999999999999998654333222122211 11111 56677887765543
|
| >d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Protoporphyrinogen oxidase species: Tobacco (Nicotiana tabacum) [TaxId: 4097]
Probab=94.74 E-value=0.014 Score=48.66 Aligned_cols=34 Identities=26% Similarity=0.302 Sum_probs=31.4
Q ss_pred CCeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCc
Q 017914 59 PNRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNV 92 (364)
Q Consensus 59 ~~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~ 92 (364)
+|||+|+|+|.-|-..+.+|.++|++|+++.+++
T Consensus 1 ~KkV~IIGaG~aGL~aA~~La~~G~~V~vlE~~~ 34 (373)
T d1seza1 1 AKRVAVIGAGVSGLAAAYKLKIHGLNVTVFEAEG 34 (373)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTSCEEEEECSSS
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCCCEEEEeCCC
Confidence 4899999999999999999999999999998764
|
| >d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit species: Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]
Probab=94.73 E-value=0.014 Score=44.47 Aligned_cols=34 Identities=24% Similarity=0.164 Sum_probs=29.9
Q ss_pred CCeEEEEcCChhhHHHHHHHHhCCC--EEEEEEeCc
Q 017914 59 PNRMLILGMGFVGRIFAEKIKNQGW--VVSGTCTNV 92 (364)
Q Consensus 59 ~~~vlVtGtG~iG~~l~~~L~~~g~--~V~~~~r~~ 92 (364)
++||+|+|+|++|-.++..|.+.+. +|+++.+.+
T Consensus 2 gkrivIvGgG~~G~e~A~~l~~~~~~~~Vtlie~~~ 37 (186)
T d1fcda1 2 GRKVVVVGGGTGGATAAKYIKLADPSIEVTLIEPNT 37 (186)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSCS
T ss_pred CCcEEEECccHHHHHHHHHHHHcCCCCcEEEEECCC
Confidence 6899999999999999999999874 788887654
|
| >d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: L-aminoacid oxidase species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]
Probab=94.55 E-value=0.015 Score=49.01 Aligned_cols=36 Identities=22% Similarity=0.331 Sum_probs=32.6
Q ss_pred CCCCeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCc
Q 017914 57 QSPNRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNV 92 (364)
Q Consensus 57 ~~~~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~ 92 (364)
...++|+|+|+|..|-..+..|.++|++|+++.+++
T Consensus 28 ~~pkkV~IIGaG~aGLsaA~~L~~~G~~V~vlE~~~ 63 (370)
T d2iida1 28 SNPKHVVIVGAGMAGLSAAYVLAGAGHQVTVLEASE 63 (370)
T ss_dssp SSCCEEEEECCBHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred CCCCeEEEECCCHHHHHHHHHHHHCCCCEEEEeCCC
Confidence 445799999999999999999999999999998764
|
| >d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Human (Homo sapiens), different isozymes [TaxId: 9606]
Probab=94.44 E-value=0.026 Score=42.89 Aligned_cols=72 Identities=15% Similarity=0.112 Sum_probs=48.1
Q ss_pred CCCCeEEEEcCChhhHHHHHHHHhCCC-EEEEEEeCchhhhhhhhCCceEEEccCCh--hhH-Hh-----hccCceeeEE
Q 017914 57 QSPNRMLILGMGFVGRIFAEKIKNQGW-VVSGTCTNVMKKKELEQSGFDVHLFNANE--TAL-MI-----LTTLKNYTHL 127 (364)
Q Consensus 57 ~~~~~vlVtGtG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~l~~~~~~~~~~D~~~--~~~-~~-----~~~~d~v~~~ 127 (364)
..+.+|||.|.|.+|...++.+...|. .|++.++++++.+...+.+...+. |..+ .+. .. -.++|.|+.+
T Consensus 27 ~~G~tVlI~GaGGvG~~aiq~ak~~G~~~vi~~~~~~~k~~~ak~lGa~~~i-~~~~~~~~~~~~~~~~~~~g~D~vid~ 105 (176)
T d2fzwa2 27 EPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATECI-NPQDFSKPIQEVLIEMTDGGVDYSFEC 105 (176)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHHTCSEEE-CGGGCSSCHHHHHHHHTTSCBSEEEEC
T ss_pred CCCCEEEEecchhHHHHHHHHHHHHhcCceEEEcccHHHHHHHHHhCCcEEE-eCCchhhHHHHHHHHHcCCCCcEeeec
Confidence 456789999987899999999999985 677777777777666555654432 2222 111 11 1457888877
Q ss_pred EE
Q 017914 128 LV 129 (364)
Q Consensus 128 ~~ 129 (364)
++
T Consensus 106 ~G 107 (176)
T d2fzwa2 106 IG 107 (176)
T ss_dssp SC
T ss_pred CC
Confidence 64
|
| >d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase species: Escherichia coli [TaxId: 562]
Probab=94.38 E-value=0.035 Score=41.52 Aligned_cols=38 Identities=16% Similarity=0.117 Sum_probs=33.1
Q ss_pred CCCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCch
Q 017914 56 WQSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVM 93 (364)
Q Consensus 56 ~~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~ 93 (364)
...+++|+|+| +..+|+-++..|.++|..|+.......
T Consensus 34 ~l~GK~v~VIGrS~~VG~Pla~lL~~~gatVt~~h~~t~ 72 (166)
T d1b0aa1 34 DTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFTK 72 (166)
T ss_dssp CCTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSCS
T ss_pred ccccceEEEEeccccccHHHHHHHHHhhccccccccccc
Confidence 45689999999 999999999999999999988876543
|
| >d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: N-terminal domain of adrenodoxin reductase-like domain: Trimethylamine dehydrogenase, middle domain species: Methylophilus methylotrophus, w3a1 [TaxId: 17]
Probab=94.37 E-value=0.026 Score=45.18 Aligned_cols=37 Identities=27% Similarity=0.322 Sum_probs=33.4
Q ss_pred CCCCeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCch
Q 017914 57 QSPNRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVM 93 (364)
Q Consensus 57 ~~~~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~ 93 (364)
...++|+|+|+|+.|-..+..|.++|++|+++.++..
T Consensus 47 ~~~k~VvIIGaGpAGl~aA~~l~~~G~~v~l~E~~~~ 83 (233)
T d1djqa3 47 KNKDSVLIVGAGPSGSEAARVLMESGYTVHLTDTAEK 83 (233)
T ss_dssp SSCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred cCCceEEEEcccHHHHHHHHHHHHhccceeeEeeccc
Confidence 4568999999999999999999999999999988654
|
| >d2bzga1 c.66.1.36 (A:17-245) Thiopurine S-methyltransferase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Thiopurine S-methyltransferase domain: Thiopurine S-methyltransferase species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.32 E-value=0.022 Score=45.51 Aligned_cols=95 Identities=9% Similarity=-0.042 Sum_probs=55.2
Q ss_pred CCCCeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCchhhhhhh------------------------hCCceEEEccCCh
Q 017914 57 QSPNRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELE------------------------QSGFDVHLFNANE 112 (364)
Q Consensus 57 ~~~~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~------------------------~~~~~~~~~D~~~ 112 (364)
..+.+||..|+|. |+ .+..|+++|++|++++-++.-..... ...++++.+|+.+
T Consensus 44 ~~~~rvLd~GCG~-G~-~a~~LA~~G~~V~gvD~S~~ai~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~ 121 (229)
T d2bzga1 44 KSGLRVFFPLCGK-AV-EMKWFADRGHSVVGVEISELGIQEFFTEQNLSYSEEPITEIPGTKVFKSSSGNISLYCCSIFD 121 (229)
T ss_dssp CCSCEEEETTCTT-CT-HHHHHHHTTCEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCGGG
T ss_pred CCCCEEEEeCCCC-cH-HHHHHHhCCCcEEEEeCCHHHHHHHHHHhhccccccchhcccccceeeecCCcEEEEEcchhh
Confidence 3457999999764 43 56677889999999999876543211 1356778888776
Q ss_pred hhHHhhccCceeeEEEEecCCCCCCCChhhhHHHHHHHHhhcCC
Q 017914 113 TALMILTTLKNYTHLLVSIPPLEGTGDPMLKHGELLRSTLMNGH 156 (364)
Q Consensus 113 ~~~~~~~~~d~v~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~ 156 (364)
........+|.|+........ ..+.......++...++..|
T Consensus 122 l~~~~~~~fd~i~~~~~l~~~---~~~~r~~~~~~~~~~LkpgG 162 (229)
T d2bzga1 122 LPRTNIGKFDMIWDRGALVAI---NPGDRKCYADTMFSLLGKKF 162 (229)
T ss_dssp GGGSCCCCEEEEEESSSTTTS---CGGGHHHHHHHHHHTEEEEE
T ss_pred ccccccCceeEEEEEEEEEec---cchhhHHHHHHHHhhcCCcc
Confidence 443222344555433321111 12223344456666666555
|
| >d2gv8a2 c.3.1.5 (A:181-287) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Flavin-dependent monoxygenase SPBP16F5.08c species: Schizosaccharomyces pombe [TaxId: 4896]
Probab=94.28 E-value=0.017 Score=40.11 Aligned_cols=38 Identities=5% Similarity=-0.154 Sum_probs=31.6
Q ss_pred CCCCCeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCch
Q 017914 56 WQSPNRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVM 93 (364)
Q Consensus 56 ~~~~~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~ 93 (364)
...+|+|+|+|+|.-|.-++..|.+.+-+|+...|+..
T Consensus 29 ~f~gK~VlVVG~g~Sa~dia~~l~~~ak~v~~~~~r~~ 66 (107)
T d2gv8a2 29 LFVGESVLVVGGASSANDLVRHLTPVAKHPIYQSLLGG 66 (107)
T ss_dssp GGTTCCEEEECSSHHHHHHHHHHTTTSCSSEEEECTTC
T ss_pred hcCCCeEEEECCCCCHHHHHHHHHHhcCEEEEEEecCc
Confidence 45679999999999999999999988777776666543
|
| >d1k0ia1 c.3.1.2 (A:1-173,A:276-394) p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: p-Hydroxybenzoate hydroxylase, PHBH species: Pseudomonas aeruginosa [TaxId: 287]
Probab=94.28 E-value=0.013 Score=48.62 Aligned_cols=34 Identities=15% Similarity=0.180 Sum_probs=31.6
Q ss_pred CeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCch
Q 017914 60 NRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVM 93 (364)
Q Consensus 60 ~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~ 93 (364)
.+|+|+|+|..|..++..|.+.|++|.++.|.++
T Consensus 3 ~~V~IvGaGp~Gl~~A~~L~~~G~~v~vlE~~~~ 36 (292)
T d1k0ia1 3 TQVAIIGAGPSGLLLGQLLHKAGIDNVILERQTP 36 (292)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHTCCEEEECSSCH
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence 4799999999999999999999999999999764
|
| >d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: D-glycerate dehydrogenase species: Hyphomicrobium methylovorum [TaxId: 84]
Probab=94.23 E-value=0.06 Score=41.52 Aligned_cols=68 Identities=10% Similarity=0.059 Sum_probs=45.4
Q ss_pred CCCCeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCChhhHHhhccCceeeEEEE
Q 017914 57 QSPNRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETALMILTTLKNYTHLLV 129 (364)
Q Consensus 57 ~~~~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~~~~~~~d~v~~~~~ 129 (364)
..+++|.|+|.|.||+.+++.|..-|.+|++.++.............. ...+ .+ +.+..+|.|+....
T Consensus 45 l~g~tvgIiG~G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~~~~~~-~~~~---l~-~ll~~sD~v~l~~p 112 (191)
T d1gdha1 45 LDNKTLGIYGFGSIGQALAKRAQGFDMDIDYFDTHRASSSDEASYQAT-FHDS---LD-SLLSVSQFFSLNAP 112 (191)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSCCCHHHHHHHTCE-ECSS---HH-HHHHHCSEEEECCC
T ss_pred ecccceEEeecccchHHHHHHHHhhccccccccccccccchhhccccc-ccCC---HH-HHHhhCCeEEecCC
Confidence 457899999999999999999999999999998865432221111111 0111 11 56777887765543
|
| >d2czca2 c.2.1.3 (A:1-139,A:302-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=94.16 E-value=0.13 Score=38.77 Aligned_cols=72 Identities=13% Similarity=0.087 Sum_probs=44.5
Q ss_pred CCCeEEEEcCChhhHHHHHHHHhCC-CEEEEEEeC-chh-hhhhhhCCceEEEccCChhh-H------------HhhccC
Q 017914 58 SPNRMLILGMGFVGRIFAEKIKNQG-WVVSGTCTN-VMK-KKELEQSGFDVHLFNANETA-L------------MILTTL 121 (364)
Q Consensus 58 ~~~~vlVtGtG~iG~~l~~~L~~~g-~~V~~~~r~-~~~-~~~l~~~~~~~~~~D~~~~~-~------------~~~~~~ 121 (364)
|++||.|-|.|-||+.+++.|.++. .+|+++.-. +.. ...+...+...+..+-.... + ....++
T Consensus 1 M~irIaINGfGRIGR~v~Ral~~~~dieiVaINd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 80 (172)
T d2czca2 1 MKVKVGVNGYGTIGKRVAYAVTKQDDMELIGITKTKPDFEAYRAKELGIPVYAASEEFIPRFEKEGFEVAGTLNDLLEKV 80 (172)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHTCTTEEEEEEEESSCSHHHHHHHHTTCCEEESSGGGHHHHHHHTCCCSCBHHHHHTTC
T ss_pred CcEEEEEECCCHHHHHHHHHHHhCCCceEEEEecCCChHHHHHhhhcCceeecccccceeeecccCccccchhhhhhccC
Confidence 4579999999999999999998764 677777642 221 22333344555444332211 1 233577
Q ss_pred ceeeEEEE
Q 017914 122 KNYTHLLV 129 (364)
Q Consensus 122 d~v~~~~~ 129 (364)
|.|+-+.+
T Consensus 81 DvViEcTG 88 (172)
T d2czca2 81 DIIVDATP 88 (172)
T ss_dssp SEEEECCS
T ss_pred CEEEECCC
Confidence 87777653
|
| >d1djqa2 c.3.1.1 (A:490-645) Trimethylamine dehydrogenase, C-terminal domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: C-terminal domain of adrenodoxin reductase-like domain: Trimethylamine dehydrogenase, C-terminal domain species: Methylophilus methylotrophus, w3a1 [TaxId: 17]
Probab=93.97 E-value=0.04 Score=40.91 Aligned_cols=36 Identities=25% Similarity=0.290 Sum_probs=31.3
Q ss_pred CCCeEEEE--cCChhhHHHHHHHHhCCCEEEEEEeCch
Q 017914 58 SPNRMLIL--GMGFVGRIFAEKIKNQGWVVSGTCTNVM 93 (364)
Q Consensus 58 ~~~~vlVt--GtG~iG~~l~~~L~~~g~~V~~~~r~~~ 93 (364)
.++.++|+ |.||+|-.++..|.+.|++|+++.+.+.
T Consensus 38 ~~~~vvi~d~ggg~ig~e~A~~la~~G~~Vtlv~~~~~ 75 (156)
T d1djqa2 38 IGKRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVHL 75 (156)
T ss_dssp CCSEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSCT
T ss_pred cCCceEEEecCCChHHHHHHHHHHHcCCeEEEEecCCc
Confidence 35677777 6899999999999999999999999754
|
| >d1yova1 c.111.1.2 (A:6-534) Amyloid beta precursor protein-binding protein 1, APPBP1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Activating enzymes of the ubiquitin-like proteins superfamily: Activating enzymes of the ubiquitin-like proteins family: Ubiquitin activating enzymes (UBA) domain: Amyloid beta precursor protein-binding protein 1, APPBP1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=93.89 E-value=0.066 Score=48.35 Aligned_cols=101 Identities=11% Similarity=0.064 Sum_probs=61.9
Q ss_pred CCCeEEEEcCChhhHHHHHHHHhCCC-EEEEEEeCchhhhh-----------------------hhh--CC--ceEEEcc
Q 017914 58 SPNRMLILGMGFVGRIFAEKIKNQGW-VVSGTCTNVMKKKE-----------------------LEQ--SG--FDVHLFN 109 (364)
Q Consensus 58 ~~~~vlVtGtG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~-----------------------l~~--~~--~~~~~~D 109 (364)
...+|+|+|.|.+|..+++.|...|. ++++++.+.-.... +.+ +. +..+..+
T Consensus 24 ~~s~VlvvG~gglG~Ei~knLvl~GVg~itivD~d~v~~sdL~rqf~~~~~diGk~ka~~~~~~L~~lNp~v~i~~~~~~ 103 (529)
T d1yova1 24 ESAHVCLINATATGTEILKNLVLPGIGSFTIIDGNQVSGEDAGNNFFLQRSSIGKNRAEAAMEFLQELNSDVSGSFVEES 103 (529)
T ss_dssp HHCEEEECCCSHHHHHHHHHHHTTTCSEEEEECCSBCCHHHHHHCTTCCGGGTTSBHHHHHHHHHHTTCTTSBCCEESSC
T ss_pred hCCCEEEECCCHHHHHHHHHHHHhcCCEEEEEcCCcCChhhcCchhcCChhhCCCHHHHHHHHHHHHhCCCCcEEEEcCC
Confidence 34699999999999999999999995 67777653311111 111 22 3334434
Q ss_pred CChhh---HHhhccCceeeEEEEecCCCCCCCChhhhHHHHHHHHhhcCCccEEEEEccceeec
Q 017914 110 ANETA---LMILTTLKNYTHLLVSIPPLEGTGDPMLKHGELLRSTLMNGHLQWLGYLSSTGVYG 170 (364)
Q Consensus 110 ~~~~~---~~~~~~~d~v~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~r~v~~Ss~~vy~ 170 (364)
..+.. ...+.++|.|+.+.. . ......+.+.|+..+++ +|++++.+.||
T Consensus 104 ~~~~~~~~~~~~~~~dvVv~~~~---------~--~~~~~~l~~~c~~~~ip-~i~~~~~G~~G 155 (529)
T d1yova1 104 PENLLDNDPSFFCRFTVVVATQL---------P--ESTSLRLADVLWNSQIP-LLICRTYGLVG 155 (529)
T ss_dssp HHHHHHSCGGGGGGCSEEEEESC---------C--HHHHHHHHHHHHHHTCC-EEEEEEETTEE
T ss_pred chhhhhhHHHHhcCCCEEEECCC---------C--HHHHHHHHHHHHHcCCC-EEEEeccCCEE
Confidence 33311 134567787775431 1 22334566777777664 88888877777
|
| >d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Transcription corepressor CtbP species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]
Probab=93.87 E-value=0.032 Score=43.20 Aligned_cols=67 Identities=19% Similarity=0.103 Sum_probs=45.9
Q ss_pred CCCCeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCChhhHHhhccCceeeEEEE
Q 017914 57 QSPNRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETALMILTTLKNYTHLLV 129 (364)
Q Consensus 57 ~~~~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~~~~~~~d~v~~~~~ 129 (364)
..+++|.|+|.|-||+.+++.|..-|.+|++.++......... .++.. ..+.+ +.+..+|+|+....
T Consensus 47 L~gktvgIiG~G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~-~~~~~----~~~l~-~ll~~sD~i~~~~p 113 (193)
T d1mx3a1 47 IRGETLGIIGLGRVGQAVALRAKAFGFNVLFYDPYLSDGVERA-LGLQR----VSTLQ-DLLFHSDCVTLHCG 113 (193)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHTTTCEEEEECTTSCTTHHHH-HTCEE----CSSHH-HHHHHCSEEEECCC
T ss_pred eeCceEEEeccccccccceeeeeccccceeeccCcccccchhh-hcccc----ccchh-hccccCCEEEEeec
Confidence 5678999999999999999999999999999998654322111 12111 11111 56677887766554
|
| >d2gv8a1 c.3.1.5 (A:3-180,A:288-444) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Flavin-dependent monoxygenase SPBP16F5.08c species: Schizosaccharomyces pombe [TaxId: 4896]
Probab=93.86 E-value=0.03 Score=47.48 Aligned_cols=37 Identities=16% Similarity=0.101 Sum_probs=31.9
Q ss_pred CCCCeEEEEcCChhhHHHHHHHHhCC--CEEEEEEeCch
Q 017914 57 QSPNRMLILGMGFVGRIFAEKIKNQG--WVVSGTCTNVM 93 (364)
Q Consensus 57 ~~~~~vlVtGtG~iG~~l~~~L~~~g--~~V~~~~r~~~ 93 (364)
..+|+|+|+|+|.-|-..+..|+++| ++|+++.|+..
T Consensus 2 ~~~KrVaIIGaG~sGl~~A~~L~~~~~~~~v~vfEk~~~ 40 (335)
T d2gv8a1 2 PTIRKIAIIGAGPSGLVTAKALLAEKAFDQVTLFERRGS 40 (335)
T ss_dssp CSCCEEEEECCSHHHHHHHHHHHTTTCCSEEEEECSSSS
T ss_pred CCCCeEEEECcCHHHHHHHHHHHHhCCCCCEEEEECCCC
Confidence 34689999999999999999998876 69999999753
|
| >d1nvmb1 c.2.1.3 (B:1-131,B:287-312) Acetaldehyde dehydrogenase (acylating) {Pseudomonas sp. [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Acetaldehyde dehydrogenase (acylating) species: Pseudomonas sp. [TaxId: 306]
Probab=93.86 E-value=0.041 Score=41.03 Aligned_cols=70 Identities=9% Similarity=0.108 Sum_probs=39.7
Q ss_pred CCCeEEEEcCChhhHHH-HHHHHhC-CCEEEEEE-eCchhh--hhhhhCCceEEEccCChhhH-HhhccCceeeEE
Q 017914 58 SPNRMLILGMGFVGRIF-AEKIKNQ-GWVVSGTC-TNVMKK--KELEQSGFDVHLFNANETAL-MILTTLKNYTHL 127 (364)
Q Consensus 58 ~~~~vlVtGtG~iG~~l-~~~L~~~-g~~V~~~~-r~~~~~--~~l~~~~~~~~~~D~~~~~~-~~~~~~d~v~~~ 127 (364)
.+++|.|+|+|.+|+.+ .+.|... ..+++++. |+.+.. ...+..++.+...++.+... ..+.++|.|+.+
T Consensus 3 kkirvaIIGaG~ig~~~~~~~l~~~~~~el~avas~~~~~~~~~~a~~~~i~~~~~~~d~l~~~~~~~~iDiVf~A 78 (157)
T d1nvmb1 3 QKLKVAIIGSGNIGTDLMIKVLRNAKYLEMGAMVGIDAASDGLARAQRMGVTTTYAGVEGLIKLPEFADIDFVFDA 78 (157)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHHCSSEEEEEEECSCTTCHHHHHHHHTTCCEESSHHHHHHHSGGGGGEEEEEEC
T ss_pred CCcEEEEEcCcHHHHHHHHHHHhhCCcceEEEEEecchhccchhhhhhcCCcccccceeeeeecccccccCEEEEc
Confidence 34699999999999865 5555444 45777764 554322 22233556555443332111 234567777664
|
| >d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Frog (Rana perezi) [TaxId: 8403]
Probab=93.84 E-value=0.055 Score=41.07 Aligned_cols=51 Identities=20% Similarity=0.096 Sum_probs=41.9
Q ss_pred CCCCCeEEEEcCChhhHHHHHHHHhCCC-EEEEEEeCchhhhhhhhCCceEE
Q 017914 56 WQSPNRMLILGMGFVGRIFAEKIKNQGW-VVSGTCTNVMKKKELEQSGFDVH 106 (364)
Q Consensus 56 ~~~~~~vlVtGtG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~l~~~~~~~~ 106 (364)
...+.+|+|.|.|.+|...++.+...|. +|++.++++++.+...+.+.+.+
T Consensus 25 ~~~G~~VlV~GaGgvGl~a~~~ak~~G~~~Vi~~d~~~~kl~~a~~lGa~~~ 76 (174)
T d1p0fa2 25 VTPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIELGATEC 76 (174)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHTTCSEE
T ss_pred CCCCCEEEEECCCchhHHHHHHHHHcCCceeeccCChHHHHHHHHHcCCcEE
Confidence 3456799999999999999999999985 79999999888777666666543
|
| >d1q1ra1 c.3.1.5 (A:2-114,A:248-319) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Putidaredoxin reductase species: Pseudomonas putida [TaxId: 303]
Probab=93.79 E-value=0.029 Score=42.78 Aligned_cols=34 Identities=21% Similarity=0.375 Sum_probs=29.8
Q ss_pred CCeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCc
Q 017914 59 PNRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNV 92 (364)
Q Consensus 59 ~~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~ 92 (364)
.++|+|+|+|++|-.++..|.+.|.+|.++.+.+
T Consensus 3 ~~~VvIIGgG~~G~e~A~~l~~~g~~v~v~~~~~ 36 (185)
T d1q1ra1 3 NDNVVIVGTGLAGVEVAFGLRASGWEGNIRLVGD 36 (185)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECS
T ss_pred CCCEEEECCcHHHHHHHHHHHHcCCceEEEEecC
Confidence 4789999999999999999999998877776654
|
| >d1nhpa1 c.3.1.5 (A:1-119,A:243-321) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH peroxidase species: Enterococcus faecalis [TaxId: 1351]
Probab=93.76 E-value=0.03 Score=43.47 Aligned_cols=33 Identities=15% Similarity=0.087 Sum_probs=29.0
Q ss_pred CeEEEEcCChhhHHHHHHHHhC--CCEEEEEEeCc
Q 017914 60 NRMLILGMGFVGRIFAEKIKNQ--GWVVSGTCTNV 92 (364)
Q Consensus 60 ~~vlVtGtG~iG~~l~~~L~~~--g~~V~~~~r~~ 92 (364)
|||+|+|+|++|-.++..|.+. +.+|+++.|..
T Consensus 1 ~KVvIIGgG~~G~e~A~~l~~~~~~~~V~v~~~~~ 35 (198)
T d1nhpa1 1 MKVIVLGSSHGGYEAVEELLNLHPDAEIQWYEKGD 35 (198)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTSEEEEEESSS
T ss_pred CEEEEECCcHHHHHHHHHHHhcCCCCeEEEEeCCC
Confidence 7899999999999999999886 56899888754
|
| >d1a9xa3 c.30.1.1 (A:1-127) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: BC N-terminal domain-like domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains species: Escherichia coli [TaxId: 562]
Probab=93.71 E-value=0.15 Score=35.96 Aligned_cols=39 Identities=23% Similarity=0.433 Sum_probs=33.0
Q ss_pred CCCCeEEEEcCC-----------hhhHHHHHHHHhCCCEEEEEEeCchhh
Q 017914 57 QSPNRMLILGMG-----------FVGRIFAEKIKNQGWVVSGTCTNVMKK 95 (364)
Q Consensus 57 ~~~~~vlVtGtG-----------~iG~~l~~~L~~~g~~V~~~~r~~~~~ 95 (364)
...++|||+|+| +.+.+.++.|.+.|++++.+.-++...
T Consensus 5 ~~~kkvlilGsGp~~IGq~~EfDy~~~~a~~alke~g~~~iliN~NP~TV 54 (127)
T d1a9xa3 5 TDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVINVNSNPATI 54 (127)
T ss_dssp SSCCEEEEECCCSCBTTBCTHHHHHHHHHHHHHHHHTCEEEEECSCTTCG
T ss_pred CCCCEEEEECCCcCcccccchhHHHHHHHHHHHHHcCCeEEEecCchHhh
Confidence 345899999976 678899999999999999999887654
|
| >d1i8ta1 c.4.1.3 (A:1-244,A:314-367) UDP-galactopyranose mutase, N-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: UDP-galactopyranose mutase, N-terminal domain domain: UDP-galactopyranose mutase, N-terminal domain species: Escherichia coli [TaxId: 562]
Probab=93.71 E-value=0.02 Score=47.88 Aligned_cols=34 Identities=21% Similarity=0.237 Sum_probs=30.9
Q ss_pred CCeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCc
Q 017914 59 PNRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNV 92 (364)
Q Consensus 59 ~~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~ 92 (364)
|..|+|+|+|.-|..++..|.++|++|.++.++.
T Consensus 1 M~dv~IIGaG~sGl~~A~~L~~~g~~V~iiEk~~ 34 (298)
T d1i8ta1 1 MYDYIIVGSGLFGAVCANELKKLNKKVLVIEKRN 34 (298)
T ss_dssp CEEEEEECCSHHHHHHHHHHGGGTCCEEEECSSS
T ss_pred CccEEEECCcHHHHHHHHHHHhCCCcEEEEECCC
Confidence 3579999999999999999999999999998864
|
| >d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: GDI-like N domain domain: Guanine nucleotide dissociation inhibitor, GDI species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=93.66 E-value=0.025 Score=45.31 Aligned_cols=32 Identities=19% Similarity=0.241 Sum_probs=29.9
Q ss_pred eEEEEcCChhhHHHHHHHHhCCCEEEEEEeCc
Q 017914 61 RMLILGMGFVGRIFAEKIKNQGWVVSGTCTNV 92 (364)
Q Consensus 61 ~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~ 92 (364)
-|+|+|+|.-|-..+..|.++|++|.++.++.
T Consensus 7 DviViGaG~~Gl~~A~~La~~G~~V~vlE~~~ 38 (297)
T d2bcgg1 7 DVIVLGTGITECILSGLLSVDGKKVLHIDKQD 38 (297)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CEEEECcCHHHHHHHHHHHHCCCCEEEEcCCC
Confidence 38999999999999999999999999999875
|
| >d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Dihydrodipicolinate reductase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=93.65 E-value=0.072 Score=38.42 Aligned_cols=29 Identities=24% Similarity=0.375 Sum_probs=24.0
Q ss_pred eEEEEc-CChhhHHHHHHHHhC-CCEEEEEE
Q 017914 61 RMLILG-MGFVGRIFAEKIKNQ-GWVVSGTC 89 (364)
Q Consensus 61 ~vlVtG-tG~iG~~l~~~L~~~-g~~V~~~~ 89 (364)
||.|+| +|-+|+.+++.+.+. ++++.+..
T Consensus 1 kI~v~Ga~GrMG~~i~~~i~~~~~~~l~~~~ 31 (135)
T d1yl7a1 1 RVGVLGAKGKVGATMVRAVAAADDLTLSAEL 31 (135)
T ss_dssp EEEEETTTSHHHHHHHHHHHHSTTSEEEEEE
T ss_pred CEEEECCCCHHHHHHHHHHHhCCCCEEEEEE
Confidence 689999 899999999988775 67877643
|
| >d1aoga2 c.3.1.5 (A:170-286) Trypanothione reductase {Trypanosoma cruzi [TaxId: 5693]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Trypanothione reductase species: Trypanosoma cruzi [TaxId: 5693]
Probab=93.59 E-value=0.039 Score=38.83 Aligned_cols=35 Identities=29% Similarity=0.387 Sum_probs=28.4
Q ss_pred CCeEEEEcCChhhHHHHHHHH---hCCCEEEEEEeCch
Q 017914 59 PNRMLILGMGFVGRIFAEKIK---NQGWVVSGTCTNVM 93 (364)
Q Consensus 59 ~~~vlVtGtG~iG~~l~~~L~---~~g~~V~~~~r~~~ 93 (364)
.++|+|+|+|++|-.++..|. .+|.+|+++.|.+.
T Consensus 20 p~~v~ivGgG~ig~E~A~~l~~l~~~~~~Vtli~~~~~ 57 (117)
T d1aoga2 20 PRRVLTVGGGFISVEFAGIFNAYKPKDGQVTLCYRGEM 57 (117)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHHCCTTCEEEEEESSSS
T ss_pred CCeEEEECCcHHHHHHHHHhhhcccCCcEEEEEeccch
Confidence 479999999999999996655 45678999998653
|
| >d1kifa1 c.4.1.2 (A:1-194,A:288-339) D-aminoacid oxidase, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: D-aminoacid oxidase, N-terminal domain domain: D-aminoacid oxidase, N-terminal domain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=93.52 E-value=0.0048 Score=49.75 Aligned_cols=28 Identities=25% Similarity=0.313 Sum_probs=25.0
Q ss_pred CeEEEEcCChhhHHHHHHHHhCCCEEEE
Q 017914 60 NRMLILGMGFVGRIFAEKIKNQGWVVSG 87 (364)
Q Consensus 60 ~~vlVtGtG~iG~~l~~~L~~~g~~V~~ 87 (364)
|+|+|+|+|.+|-..+.+|+++|++|++
T Consensus 1 mkV~VIGaGi~GlstA~~L~~~G~~v~v 28 (246)
T d1kifa1 1 MRVVVIGAGVIGLSTALCIHERYHSVLQ 28 (246)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHTTTSS
T ss_pred CEEEEECchHHHHHHHHHHHHCCCCceE
Confidence 7899999999999999999999986543
|
| >d3c96a1 c.3.1.2 (A:4-182,A:294-402) Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Monooxygenase PhzS species: Pseudomonas aeruginosa [TaxId: 287]
Probab=93.24 E-value=0.049 Score=44.35 Aligned_cols=34 Identities=24% Similarity=0.176 Sum_probs=30.9
Q ss_pred CeEEEEcCChhhHHHHHHHHhCC-CEEEEEEeCch
Q 017914 60 NRMLILGMGFVGRIFAEKIKNQG-WVVSGTCTNVM 93 (364)
Q Consensus 60 ~~vlVtGtG~iG~~l~~~L~~~g-~~V~~~~r~~~ 93 (364)
++|+|+|+|..|..++..|.+.| ++|.++.|++.
T Consensus 2 ~~V~IvGaG~aGl~~A~~L~~~Gi~~V~V~Er~~~ 36 (288)
T d3c96a1 2 IDILIAGAGIGGLSCALALHQAGIGKVTLLESSSE 36 (288)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSEEEEEESSSS
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCCeEEEEeCCCC
Confidence 68999999999999999999999 59999998754
|
| >d1d7ya1 c.3.1.5 (A:5-115,A:237-308) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH-dependent ferredoxin reductase, BphA4 species: Pseudomonas sp., KKS102 [TaxId: 306]
Probab=93.19 E-value=0.02 Score=43.91 Aligned_cols=34 Identities=18% Similarity=0.338 Sum_probs=28.1
Q ss_pred CCCeEEEEcCChhhHHHHHHHHhCCCEEEEEEeC
Q 017914 58 SPNRMLILGMGFVGRIFAEKIKNQGWVVSGTCTN 91 (364)
Q Consensus 58 ~~~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~ 91 (364)
|+.+|+|+|+|++|-.++..|.+.|.+|.++.+.
T Consensus 2 m~a~VvIIGgG~~G~e~A~~l~~~g~~v~i~~~~ 35 (183)
T d1d7ya1 2 LKAPVVVLGAGLASVSFVAELRQAGYQGLITVVG 35 (183)
T ss_dssp CCSSEEEECCSHHHHHHHHHHHHHTCCSCEEEEE
T ss_pred CCCCEEEECccHHHHHHHHHHHhcCCceEEEEEe
Confidence 3457999999999999999999999876665553
|
| >d1pj5a2 c.3.1.2 (A:4-219,A:339-427) N,N-dimethylglycine oxidase {Arthrobacter globiformis [TaxId: 1665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: N,N-dimethylglycine oxidase species: Arthrobacter globiformis [TaxId: 1665]
Probab=93.18 E-value=0.034 Score=46.26 Aligned_cols=33 Identities=27% Similarity=0.615 Sum_probs=29.8
Q ss_pred CeEEEEcCChhhHHHHHHHHhCCC-EEEEEEeCc
Q 017914 60 NRMLILGMGFVGRIFAEKIKNQGW-VVSGTCTNV 92 (364)
Q Consensus 60 ~~vlVtGtG~iG~~l~~~L~~~g~-~V~~~~r~~ 92 (364)
.+|+|+|+|.+|..++.+|.++|+ +|+++.|+.
T Consensus 2 ~dViIIGaGi~G~s~A~~La~~G~~~V~liE~~~ 35 (305)
T d1pj5a2 2 PRIVIIGAGIVGTNLADELVTRGWNNITVLDQGP 35 (305)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCCEEEECSSC
T ss_pred CCEEEECcCHHHHHHHHHHHHcCCCcEEEEeCCC
Confidence 379999999999999999999996 799999864
|
| >d2gf3a1 c.3.1.2 (A:1-217,A:322-385) Sarcosine oxidase {Bacillus sp., strain b0618 [TaxId: 1409]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Sarcosine oxidase species: Bacillus sp., strain b0618 [TaxId: 1409]
Probab=93.10 E-value=0.034 Score=45.61 Aligned_cols=32 Identities=16% Similarity=0.153 Sum_probs=29.7
Q ss_pred eEEEEcCChhhHHHHHHHHhCCCEEEEEEeCc
Q 017914 61 RMLILGMGFVGRIFAEKIKNQGWVVSGTCTNV 92 (364)
Q Consensus 61 ~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~ 92 (364)
-|+|+|+|.+|..++.+|.++|++|+++.+..
T Consensus 5 DvvIIGaGi~Gls~A~~La~~G~~V~viE~~~ 36 (281)
T d2gf3a1 5 DVIVVGAGSMGMAAGYQLAKQGVKTLLVDAFD 36 (281)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEECSSC
T ss_pred CEEEECcCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 38999999999999999999999999999864
|
| >d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Cod (Gadus callarias) [TaxId: 8053]
Probab=92.90 E-value=0.13 Score=38.81 Aligned_cols=72 Identities=14% Similarity=0.077 Sum_probs=49.6
Q ss_pred CCCCeEEEEcCChhhHHHHHHHHhCC-CEEEEEEeCchhhhhhhhCCceEEEccCChhh-----H-Hh--hccCceeeEE
Q 017914 57 QSPNRMLILGMGFVGRIFAEKIKNQG-WVVSGTCTNVMKKKELEQSGFDVHLFNANETA-----L-MI--LTTLKNYTHL 127 (364)
Q Consensus 57 ~~~~~vlVtGtG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~-----~-~~--~~~~d~v~~~ 127 (364)
..+.+|+|+|.|.+|...+..+...| .+|++.++++++.+...+.+.+.+. |..+.+ . .. -.++|.++.+
T Consensus 27 k~g~~VlI~G~Gg~g~~~~~~~~~~g~~~Vi~~~~~~~rl~~a~~~GAd~~i-n~~~~~~~~~~~~~~~~~~G~d~vid~ 105 (175)
T d1cdoa2 27 EPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVFGATDFV-NPNDHSEPISQVLSKMTNGGVDFSLEC 105 (175)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCCEEE-CGGGCSSCHHHHHHHHHTSCBSEEEEC
T ss_pred CCCCEEEEEecCCccchHHHHHHHHhhchheeecchHHHHHHHHHcCCcEEE-cCCCcchhHHHHHHhhccCCcceeeee
Confidence 45578999998888888888888876 5799999998888777777764432 332211 1 11 1457877776
Q ss_pred EE
Q 017914 128 LV 129 (364)
Q Consensus 128 ~~ 129 (364)
++
T Consensus 106 ~G 107 (175)
T d1cdoa2 106 VG 107 (175)
T ss_dssp SC
T ss_pred cC
Confidence 64
|
| >d1feca2 c.3.1.5 (A:170-286) Trypanothione reductase {Crithidia fasciculata [TaxId: 5656]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Trypanothione reductase species: Crithidia fasciculata [TaxId: 5656]
Probab=92.82 E-value=0.064 Score=37.60 Aligned_cols=35 Identities=29% Similarity=0.402 Sum_probs=29.3
Q ss_pred CCeEEEEcCChhhHHHHHHHHh---CCCEEEEEEeCch
Q 017914 59 PNRMLILGMGFVGRIFAEKIKN---QGWVVSGTCTNVM 93 (364)
Q Consensus 59 ~~~vlVtGtG~iG~~l~~~L~~---~g~~V~~~~r~~~ 93 (364)
.++|+|+|.|++|-.++..|.+ .|.+|+++.|.+.
T Consensus 18 p~~v~IiGgG~ig~E~A~~l~~~~~~g~~Vtli~~~~~ 55 (117)
T d1feca2 18 PKRALCVGGGYISIEFAGIFNAYKARGGQVDLAYRGDM 55 (117)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHHSCTTCEEEEEESSSS
T ss_pred CCeEEEECCChHHHHHHHHhHhhcccccccceeccccc
Confidence 4799999999999999976554 4889999998654
|
| >d1diha1 c.2.1.3 (A:2-130,A:241-273) Dihydrodipicolinate reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Dihydrodipicolinate reductase species: Escherichia coli [TaxId: 562]
Probab=92.62 E-value=0.033 Score=41.76 Aligned_cols=32 Identities=22% Similarity=0.260 Sum_probs=26.4
Q ss_pred CCCeEEEEc-CChhhHHHHHHHHhC-CCEEEEEE
Q 017914 58 SPNRMLILG-MGFVGRIFAEKIKNQ-GWVVSGTC 89 (364)
Q Consensus 58 ~~~~vlVtG-tG~iG~~l~~~L~~~-g~~V~~~~ 89 (364)
..++|.|.| +|-+|+.|++.+.+. +.++++..
T Consensus 3 s~ikI~i~Ga~GrMG~~i~~~i~~~~~~~lv~~~ 36 (162)
T d1diha1 3 ANIRVAIAGAGGRMGRQLIQAALALEGVQLGAAL 36 (162)
T ss_dssp CBEEEEETTTTSHHHHHHHHHHHHSTTEECCCEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhCCCCEEEEEE
Confidence 347999999 899999999999886 67776654
|
| >d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase species: Human (Homo sapiens) [TaxId: 9606]
Probab=92.58 E-value=0.18 Score=37.72 Aligned_cols=40 Identities=10% Similarity=0.082 Sum_probs=34.7
Q ss_pred CCCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhh
Q 017914 56 WQSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKK 95 (364)
Q Consensus 56 ~~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~ 95 (364)
...+++|+|+| +..+|+-|+..|.++|..|+.......+.
T Consensus 36 ~l~Gk~vvVIGrS~iVGrPLa~lL~~~gatVt~~~~~t~~l 76 (170)
T d1a4ia1 36 PIAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKTAHL 76 (170)
T ss_dssp CCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSSH
T ss_pred ccccceEEEEecCCccchHHHHHHHhccCceEEEecccccH
Confidence 46789999999 99999999999999999999988765443
|
| >d2dw4a2 c.3.1.2 (A:274-654,A:764-831) Lysine-specific histone demethylase 1, LSD1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Lysine-specific histone demethylase 1, LSD1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=92.58 E-value=0.069 Score=44.89 Aligned_cols=35 Identities=20% Similarity=0.292 Sum_probs=31.0
Q ss_pred CCCeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCc
Q 017914 58 SPNRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNV 92 (364)
Q Consensus 58 ~~~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~ 92 (364)
...+|+|+|+|.-|-.-+..|.++|++|+++-++.
T Consensus 4 ~~~kViVIGaG~aGL~aA~~L~~~G~~V~VlEa~~ 38 (449)
T d2dw4a2 4 KTGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARD 38 (449)
T ss_dssp CCCEEEEECCBHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CCCcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCC
Confidence 34689999999999999999999999999997643
|
| >d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase species: Escherichia coli [TaxId: 562]
Probab=92.50 E-value=0.062 Score=39.53 Aligned_cols=33 Identities=18% Similarity=0.335 Sum_probs=28.5
Q ss_pred CCeEEEEc-CChhhHHHHHHHHhC--CCEEEEEEeC
Q 017914 59 PNRMLILG-MGFVGRIFAEKIKNQ--GWVVSGTCTN 91 (364)
Q Consensus 59 ~~~vlVtG-tG~iG~~l~~~L~~~--g~~V~~~~r~ 91 (364)
|++|.|.| ||.||.....-+.+. .++|.+++-.
T Consensus 1 MK~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~Lsa~ 36 (151)
T d1q0qa2 1 MKQLTILGSTGSIGCSTLDVVRHNPEHFRVVALVAG 36 (151)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHCTTTEEEEEEEES
T ss_pred CCeEEEEcCCcHHHHHHHHHHHhCCCCcEEEEEEec
Confidence 57899999 999999999988876 4899998764
|
| >d1xhca1 c.3.1.5 (A:1-103,A:226-289) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH oxidase /nitrite reductase species: Pyrococcus furiosus [TaxId: 2261]
Probab=92.47 E-value=0.058 Score=40.27 Aligned_cols=31 Identities=23% Similarity=0.295 Sum_probs=27.1
Q ss_pred eEEEEcCChhhHHHHHHHHhCCCEEEEEEeCc
Q 017914 61 RMLILGMGFVGRIFAEKIKNQGWVVSGTCTNV 92 (364)
Q Consensus 61 ~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~ 92 (364)
||+|+|+|++|-.++..|. ++.+|+++.|.+
T Consensus 2 rVvIIGgG~~G~e~A~~l~-~~~~Vtvv~~~~ 32 (167)
T d1xhca1 2 KVVIVGNGPGGFELAKQLS-QTYEVTVIDKEP 32 (167)
T ss_dssp EEEEECCSHHHHHHHHHHT-TTSEEEEECSSS
T ss_pred eEEEECCcHHHHHHHHHHH-cCCCEEEEeccc
Confidence 7999999999999999885 478999998754
|
| >d1leha1 c.2.1.7 (A:135-364) Leucine dehydrogenase {Bacillus sphaericus [TaxId: 1421]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Leucine dehydrogenase species: Bacillus sphaericus [TaxId: 1421]
Probab=92.46 E-value=0.092 Score=41.60 Aligned_cols=68 Identities=15% Similarity=0.112 Sum_probs=47.6
Q ss_pred CCCCCeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCchhhhhhh-hCCceEEEccCChhhHHhhccCceeeEEE
Q 017914 56 WQSPNRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELE-QSGFDVHLFNANETALMILTTLKNYTHLL 128 (364)
Q Consensus 56 ~~~~~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~-~~~~~~~~~D~~~~~~~~~~~~d~v~~~~ 128 (364)
+..+++|+|-|-|.+|+++++.|.+.|.+|++.+.+......+. ..+...+ +++...-..+|+++-+|
T Consensus 36 ~l~g~~v~IqG~GnVG~~~a~~L~~~Gakvv~~d~~~~~~~~~~~~~g~~~~-----~~~~~~~~~cDIl~PcA 104 (230)
T d1leha1 36 SLEGLAVSVQGLGNVAKALCKKLNTEGAKLVVTDVNKAAVSAAVAEEGADAV-----APNAIYGVTCDIFAPCA 104 (230)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCCEEC-----CGGGTTTCCCSEEEECS
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHCCCEEEeecccHHHHHHHHHhcCCccc-----CCcccccccccEecccc
Confidence 46789999999999999999999999999999888766554332 1233221 22211224678777766
|
| >d2d59a1 c.2.1.8 (A:4-142) Hypothetical protein PH1109 {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: CoA-binding domain domain: Hypothetical protein PH1109 species: Pyrococcus horikoshii [TaxId: 53953]
Probab=92.41 E-value=0.17 Score=36.58 Aligned_cols=33 Identities=12% Similarity=0.179 Sum_probs=29.0
Q ss_pred CCeEEEEc-C---ChhhHHHHHHHHhCCCEEEEEEeC
Q 017914 59 PNRMLILG-M---GFVGRIFAEKIKNQGWVVSGTCTN 91 (364)
Q Consensus 59 ~~~vlVtG-t---G~iG~~l~~~L~~~g~~V~~~~r~ 91 (364)
.++|.|+| + +..|..+++.|.+.||+|+.+..+
T Consensus 19 ~ksIAVVGaS~~~~~~g~~v~~~L~~~g~~v~pVnP~ 55 (139)
T d2d59a1 19 YKKIALVGASPKPERDANIVMKYLLEHGYDVYPVNPK 55 (139)
T ss_dssp CCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTT
T ss_pred CCeEEEEeecCCCCCchHHHHHHHHHCCCEEEEECCc
Confidence 47899999 5 789999999999999998888654
|
| >d1y81a1 c.2.1.8 (A:6-121) Hypothetical protein PF0725 {Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: CoA-binding domain domain: Hypothetical protein PF0725 species: Pyrococcus furiosus [TaxId: 2261]
Probab=92.40 E-value=0.22 Score=34.65 Aligned_cols=32 Identities=19% Similarity=0.374 Sum_probs=27.8
Q ss_pred CeEEEEc-C---ChhhHHHHHHHHhCCCEEEEEEeC
Q 017914 60 NRMLILG-M---GFVGRIFAEKIKNQGWVVSGTCTN 91 (364)
Q Consensus 60 ~~vlVtG-t---G~iG~~l~~~L~~~g~~V~~~~r~ 91 (364)
|+|.|+| + |..|..+.+.|++.||+|+.+..+
T Consensus 2 KsIAVvGaS~~~~k~g~~v~~~L~~~g~~V~pVnP~ 37 (116)
T d1y81a1 2 RKIALVGASKNPAKYGNIILKDLLSKGFEVLPVNPN 37 (116)
T ss_dssp CEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTT
T ss_pred cEEEEEcccCCCCCcHHHHHHHHHHCCCEEEEEccc
Confidence 6899999 5 789999999999999998887543
|
| >d1m6ia2 c.3.1.5 (A:264-400) Apoptosis-inducing factor (AIF) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Apoptosis-inducing factor (AIF) species: Human (Homo sapiens) [TaxId: 9606]
Probab=92.33 E-value=0.065 Score=38.82 Aligned_cols=35 Identities=23% Similarity=0.243 Sum_probs=29.6
Q ss_pred CCeEEEEcCChhhHHHHHHHH----hCCCEEEEEEeCch
Q 017914 59 PNRMLILGMGFVGRIFAEKIK----NQGWVVSGTCTNVM 93 (364)
Q Consensus 59 ~~~vlVtGtG~iG~~l~~~L~----~~g~~V~~~~r~~~ 93 (364)
.++|+|+|+|++|-.++..|. +.|.+|+.+.+.+.
T Consensus 37 ~k~i~IvGgG~~G~E~A~~l~~~~~~~g~~Vt~i~~~~~ 75 (137)
T d1m6ia2 37 VKSITIIGGGFLGSELACALGRKARALGTEVIQLFPEKG 75 (137)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHHHHHhcCCEEEEeccccc
Confidence 479999999999999998885 35899999988654
|
| >d1v9la1 c.2.1.7 (A:180-421) Glutamate dehydrogenase {Pyrobaculum islandicum [TaxId: 2277]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamate dehydrogenase species: Pyrobaculum islandicum [TaxId: 2277]
Probab=92.07 E-value=0.1 Score=41.79 Aligned_cols=36 Identities=28% Similarity=0.205 Sum_probs=32.3
Q ss_pred CCCCCeEEEEcCChhhHHHHHHHHhCCCEEEEEEeC
Q 017914 56 WQSPNRMLILGMGFVGRIFAEKIKNQGWVVSGTCTN 91 (364)
Q Consensus 56 ~~~~~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~ 91 (364)
...+++|+|=|-|.+|+++++.|.+.|.+|++++-.
T Consensus 28 ~l~g~~v~IqGfGnVG~~~a~~L~~~Gakvv~vsD~ 63 (242)
T d1v9la1 28 GIEGKTVAIQGMGNVGRWTAYWLEKMGAKVIAVSDI 63 (242)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHTTTCEEEEEECS
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCeEEEeecc
Confidence 456789999999999999999999999999988753
|
| >d1obba1 c.2.1.5 (A:2-172) Alpha-glucosidase AglA {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Alpha-glucosidase AglA species: Thermotoga maritima [TaxId: 2336]
Probab=92.04 E-value=0.17 Score=38.10 Aligned_cols=70 Identities=10% Similarity=0.076 Sum_probs=41.5
Q ss_pred CCeEEEEcCChhhHH--HHHHHHhC----CCEEEEEEeCchhhhhhh--------hCCceEEEccCChhhHHhhccCcee
Q 017914 59 PNRMLILGMGFVGRI--FAEKIKNQ----GWVVSGTCTNVMKKKELE--------QSGFDVHLFNANETALMILTTLKNY 124 (364)
Q Consensus 59 ~~~vlVtGtG~iG~~--l~~~L~~~----g~~V~~~~r~~~~~~~l~--------~~~~~~~~~D~~~~~~~~~~~~d~v 124 (364)
+|||.|+|+|.+|.. ++..|+.. +.+++.+++++++.+... ..+........+|.+ +++.++|.|
T Consensus 2 ~mKI~iIGaGsvg~t~~~~~~l~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~i~~~td~~-eaL~dad~V 80 (171)
T d1obba1 2 SVKIGIIGAGSAVFSLRLVSDLCKTPGLSGSTVTLMDIDEERLDAILTIAKKYVEEVGADLKFEKTMNLD-DVIIDADFV 80 (171)
T ss_dssp CCEEEEETTTCHHHHHHHHHHHHTCGGGTTCEEEEECSCHHHHHHHHHHHHHHHHHTTCCCEEEEESCHH-HHHTTCSEE
T ss_pred CcEEEEECCCHHHhHHHHHHHHHhccccCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCCeEEEEeCChh-hcccCCCeE
Confidence 589999999988864 34445443 469999999877654311 011111111112222 567888888
Q ss_pred eEEEE
Q 017914 125 THLLV 129 (364)
Q Consensus 125 ~~~~~ 129 (364)
+..+.
T Consensus 81 v~~~~ 85 (171)
T d1obba1 81 INTAM 85 (171)
T ss_dssp EECCC
T ss_pred eeecc
Confidence 77653
|
| >d1b5qa1 c.3.1.2 (A:5-293,A:406-463) Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Polyamine oxidase species: Maize (Zea mays) [TaxId: 4577]
Probab=91.90 E-value=0.062 Score=43.28 Aligned_cols=33 Identities=18% Similarity=0.276 Sum_probs=29.7
Q ss_pred CeEEEEcCChhhHHHHHHHHhCCC-EEEEEEeCc
Q 017914 60 NRMLILGMGFVGRIFAEKIKNQGW-VVSGTCTNV 92 (364)
Q Consensus 60 ~~vlVtGtG~iG~~l~~~L~~~g~-~V~~~~r~~ 92 (364)
.+|+|+|+|.-|-..+..|.++|+ +|+++.+++
T Consensus 1 P~V~IIGaG~aGL~aA~~L~~~G~~~V~vlE~~~ 34 (347)
T d1b5qa1 1 PRVIVVGAGMSGISAAKRLSEAGITDLLILEATD 34 (347)
T ss_dssp CCEEEECCBHHHHHHHHHHHHTTCCCEEEECSSS
T ss_pred CCEEEECCcHHHHHHHHHHHhCCCCcEEEEECCC
Confidence 379999999999999999999995 799998864
|
| >d2cvza2 c.2.1.6 (A:2-157) Hydroxyisobutyrate dehydrogenase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Hydroxyisobutyrate dehydrogenase species: Thermus thermophilus [TaxId: 274]
Probab=91.63 E-value=0.09 Score=38.95 Aligned_cols=37 Identities=14% Similarity=0.119 Sum_probs=30.4
Q ss_pred eEEEEcCChhhHHHHHHHHhCCCEEEEEEeCchhhhhh
Q 017914 61 RMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMKKKEL 98 (364)
Q Consensus 61 ~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l 98 (364)
||-++|.|.+|..+++.|++.|+.| +..|+.++...+
T Consensus 2 kIg~IGlG~MG~~ma~~L~~~g~~~-~~~~~~~~~~~~ 38 (156)
T d2cvza2 2 KVAFIGLGAMGYPMAGHLARRFPTL-VWNRTFEKALRH 38 (156)
T ss_dssp CEEEECCSTTHHHHHHHHHTTSCEE-EECSSTHHHHHH
T ss_pred eEEEEeHHHHHHHHHHHHHhCCCEE-EEeCCHHHHHHH
Confidence 6889999999999999999999876 467776655444
|
| >d1hwxa1 c.2.1.7 (A:209-501) Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamate dehydrogenase species: Cow (Bos taurus) [TaxId: 9913]
Probab=91.39 E-value=0.14 Score=41.87 Aligned_cols=36 Identities=14% Similarity=0.080 Sum_probs=32.3
Q ss_pred CCCCCeEEEEcCChhhHHHHHHHHhCCCEEEEEEeC
Q 017914 56 WQSPNRMLILGMGFVGRIFAEKIKNQGWVVSGTCTN 91 (364)
Q Consensus 56 ~~~~~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~ 91 (364)
...+++|+|-|-|.+|+++++.|.+.|.+|++++-+
T Consensus 33 ~L~gktvaIqGfGnVG~~~A~~L~e~Gakvv~vsD~ 68 (293)
T d1hwxa1 33 GFGDKTFAVQGFGNVGLHSMRYLHRFGAKCVAVGES 68 (293)
T ss_dssp SSTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEEET
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEEcc
Confidence 456789999999999999999999999999998753
|
| >d1vkza2 c.30.1.1 (A:4-93) Glycinamide ribonucleotide synthetase (GAR-syn), N-domain {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: BC N-terminal domain-like domain: Glycinamide ribonucleotide synthetase (GAR-syn), N-domain species: Thermotoga maritima [TaxId: 2336]
Probab=91.38 E-value=0.16 Score=33.48 Aligned_cols=32 Identities=28% Similarity=0.202 Sum_probs=27.9
Q ss_pred CeEEEEcCChhhHHHHHHHHhCCCEEEEEEeC
Q 017914 60 NRMLILGMGFVGRIFAEKIKNQGWVVSGTCTN 91 (364)
Q Consensus 60 ~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~ 91 (364)
|||||+|+|.=-.+|+..|.+..++|++.--+
T Consensus 1 MkVLviGsGgREHAia~~l~~s~~~v~~~pGN 32 (90)
T d1vkza2 1 VRVHILGSGGREHAIGWAFAKQGYEVHFYPGN 32 (90)
T ss_dssp CEEEEEECSHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CEEEEECCCHHHHHHHHHHhcCCCeEEEecCC
Confidence 79999999888899999999999999887543
|
| >d1n4wa1 c.3.1.2 (A:9-318,A:451-507) Cholesterol oxidase of GMC family {Streptomyces sp. [TaxId: 1931]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Cholesterol oxidase of GMC family species: Streptomyces sp. [TaxId: 1931]
Probab=91.28 E-value=0.081 Score=45.17 Aligned_cols=31 Identities=13% Similarity=0.193 Sum_probs=29.0
Q ss_pred eEEEEcCChhhHHHHHHHHhCCCEEEEEEeC
Q 017914 61 RMLILGMGFVGRIFAEKIKNQGWVVSGTCTN 91 (364)
Q Consensus 61 ~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~ 91 (364)
-|+|+|+|+-|..++.+|.++|++|.++-+.
T Consensus 4 ~VIVVGsG~aG~v~A~rLaeaG~~VlvLEaG 34 (367)
T d1n4wa1 4 PAVVIGTGYGAAVSALRLGEAGVQTLMLEMG 34 (367)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred eEEEeCcCHHHHHHHHHHHHCcCeEEEEecC
Confidence 4899999999999999999999999999985
|
| >d1w4xa1 c.3.1.5 (A:10-154,A:390-542) Phenylacetone monooxygenase {Thermobifida fusca [TaxId: 2021]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Phenylacetone monooxygenase species: Thermobifida fusca [TaxId: 2021]
Probab=90.81 E-value=0.096 Score=43.47 Aligned_cols=34 Identities=24% Similarity=0.273 Sum_probs=31.2
Q ss_pred CeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCch
Q 017914 60 NRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVM 93 (364)
Q Consensus 60 ~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~ 93 (364)
-.|+|+|+|+-|-..+..|.++|.+|+++.+.++
T Consensus 8 ~dV~IIGAG~sGl~~a~~L~~~G~~v~i~Ek~~~ 41 (298)
T d1w4xa1 8 VDVLVVGAGFSGLYALYRLRELGRSVHVIETAGD 41 (298)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred CCEEEECccHHHHHHHHHHHhCCCCEEEEEcCCC
Confidence 4799999999999999999999999999998754
|
| >d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase species: Zymomonas mobilis [TaxId: 542]
Probab=90.57 E-value=0.11 Score=38.03 Aligned_cols=34 Identities=24% Similarity=0.404 Sum_probs=28.9
Q ss_pred CCeEEEEc-CChhhHHHHHHHHhC--CCEEEEEEeCc
Q 017914 59 PNRMLILG-MGFVGRIFAEKIKNQ--GWVVSGTCTNV 92 (364)
Q Consensus 59 ~~~vlVtG-tG~iG~~l~~~L~~~--g~~V~~~~r~~ 92 (364)
+++|.|+| ||-||....+-+.+. .++|.+++-..
T Consensus 2 pK~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~lsa~~ 38 (150)
T d1r0ka2 2 PRTVTVLGATGSIGHSTLDLIERNLDRYQVIALTANR 38 (150)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHTGGGEEEEEEEESS
T ss_pred CcEEEEECCCcHHHHHHHHHHHcCCCCcEEEEEEeCC
Confidence 47999999 999999999999775 58999987653
|
| >d1nt2a_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Fibrillarin homologue domain: Fibrillarin homologue species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=90.42 E-value=0.38 Score=37.31 Aligned_cols=92 Identities=14% Similarity=0.118 Sum_probs=58.0
Q ss_pred CCCCCeEEEEc--CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhh-----hCCceEEEccCChhhH--HhhccCceeeE
Q 017914 56 WQSPNRMLILG--MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELE-----QSGFDVHLFNANETAL--MILTTLKNYTH 126 (364)
Q Consensus 56 ~~~~~~vlVtG--tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~-----~~~~~~~~~D~~~~~~--~~~~~~d~v~~ 126 (364)
...+++||=+| +|..-.+|++.. ..| .|++++.++.....+. ..++.++.+|..++.. .....+|.|+|
T Consensus 54 lkpg~~VLDlGcG~G~~~~~la~~v-~~g-~V~gvDis~~~i~~a~~~a~~~~ni~~i~~d~~~~~~~~~~~~~vd~v~~ 131 (209)
T d1nt2a_ 54 LRGDERVLYLGAASGTTVSHLADIV-DEG-IIYAVEYSAKPFEKLLELVRERNNIIPLLFDASKPWKYSGIVEKVDLIYQ 131 (209)
T ss_dssp CCSSCEEEEETCTTSHHHHHHHHHT-TTS-EEEEECCCHHHHHHHHHHHHHCSSEEEECSCTTCGGGTTTTCCCEEEEEE
T ss_pred CCCCCEEEEeCCcCCHHHHHHHHhc-cCC-eEEEEeCCHHHHHHHHHHhhccCCceEEEeeccCccccccccceEEEEEe
Confidence 45568999998 588777777654 445 8999999886654432 2578899999998764 23344555554
Q ss_pred EEEecCCCCCCCChhhhHHHHHHHHhhcCC
Q 017914 127 LLVSIPPLEGTGDPMLKHGELLRSTLMNGH 156 (364)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~ 156 (364)
... ..........++...++..|
T Consensus 132 ~~~-------~~~~~~~~l~~~~~~LkpgG 154 (209)
T d1nt2a_ 132 DIA-------QKNQIEILKANAEFFLKEKG 154 (209)
T ss_dssp CCC-------STTHHHHHHHHHHHHEEEEE
T ss_pred ccc-------ChhhHHHHHHHHHHHhccCC
Confidence 321 11222334456666666555
|
| >d1bgva1 c.2.1.7 (A:195-449) Glutamate dehydrogenase {Clostridium symbiosum [TaxId: 1512]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamate dehydrogenase species: Clostridium symbiosum [TaxId: 1512]
Probab=90.22 E-value=0.13 Score=41.44 Aligned_cols=35 Identities=17% Similarity=0.075 Sum_probs=31.6
Q ss_pred CCCCCeEEEEcCChhhHHHHHHHHhCCCEEEEEEe
Q 017914 56 WQSPNRMLILGMGFVGRIFAEKIKNQGWVVSGTCT 90 (364)
Q Consensus 56 ~~~~~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r 90 (364)
...+++|+|-|.|.+|+++++.|.+.|.+|++++-
T Consensus 33 ~l~g~~v~IQGfGnVG~~~a~~L~e~GakvvavsD 67 (255)
T d1bgva1 33 TLVGKTVALAGFGNVAWGAAKKLAELGAKAVTLSG 67 (255)
T ss_dssp CSTTCEEEECCSSHHHHHHHHHHHHHTCEEEEEEE
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCeEEEEec
Confidence 35678999999999999999999999999998865
|
| >d2v5za1 c.3.1.2 (A:6-289,A:402-500) Monoamine oxidase B {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Monoamine oxidase B species: Human (Homo sapiens) [TaxId: 9606]
Probab=90.08 E-value=0.12 Score=43.33 Aligned_cols=31 Identities=19% Similarity=0.255 Sum_probs=28.9
Q ss_pred EEEEcCChhhHHHHHHHHhCCCEEEEEEeCc
Q 017914 62 MLILGMGFVGRIFAEKIKNQGWVVSGTCTNV 92 (364)
Q Consensus 62 vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~ 92 (364)
|+|+|+|.-|-..+..|.++|++|+++.++.
T Consensus 2 ViVIGaG~aGL~aA~~L~~~G~~V~VlE~~~ 32 (383)
T d2v5za1 2 VVVVGGGISGMAAAKLLHDSGLNVVVLEARD 32 (383)
T ss_dssp EEEECCBHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred EEEECCCHHHHHHHHHHHhCCCCEEEEecCC
Confidence 7899999999999999999999999998754
|
| >d2bw0a2 c.65.1.1 (A:1-203) 10-formyltetrahydrofolate dehydrogenase domain 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Formyltransferase superfamily: Formyltransferase family: Formyltransferase domain: 10-formyltetrahydrofolate dehydrogenase domain 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=89.94 E-value=0.18 Score=39.16 Aligned_cols=32 Identities=19% Similarity=0.388 Sum_probs=28.7
Q ss_pred CeEEEEcCChhhHHHHHHHHhCCCEEEEEEeC
Q 017914 60 NRMLILGMGFVGRIFAEKIKNQGWVVSGTCTN 91 (364)
Q Consensus 60 ~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~ 91 (364)
|||+++|++..|..+.+.|++.||+|.++...
T Consensus 1 MkI~~~G~~~~~~~~l~~L~~~~~~i~~V~t~ 32 (203)
T d2bw0a2 1 MKIAVIGQSLFGQEVYCHLRKEGHEVVGVFTV 32 (203)
T ss_dssp CEEEEECCHHHHHHHHHHHHHTTCEEEEEEEC
T ss_pred CEEEEEcCCHHHHHHHHHHHHCCCcEEEEEcC
Confidence 78999999999999999999999999977643
|
| >d2i0za1 c.3.1.8 (A:1-192,A:362-420) Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: HI0933 N-terminal domain-like domain: Flavoprotein BC4706 species: Bacillus cereus [TaxId: 1396]
Probab=89.62 E-value=0.13 Score=40.98 Aligned_cols=33 Identities=18% Similarity=0.099 Sum_probs=30.3
Q ss_pred eEEEEcCChhhHHHHHHHHhCCCEEEEEEeCch
Q 017914 61 RMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVM 93 (364)
Q Consensus 61 ~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~ 93 (364)
-|+|+|+|..|...+..|.++|++|.++.++..
T Consensus 4 DViIIGaG~aGl~aA~~la~~G~~V~liEk~~~ 36 (251)
T d2i0za1 4 DVIVIGGGPSGLMAAIGAAEEGANVLLLDKGNK 36 (251)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred CEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCC
Confidence 489999999999999999999999999998654
|
| >d2i76a2 c.2.1.6 (A:2-154) Hypothetical protein TM1727 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Hypothetical protein TM1727 species: Thermotoga maritima [TaxId: 2336]
Probab=89.39 E-value=0.041 Score=40.72 Aligned_cols=61 Identities=11% Similarity=0.001 Sum_probs=36.7
Q ss_pred EEEcCChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCChhhHHhhccCceeeEEE
Q 017914 63 LILGMGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNANETALMILTTLKNYTHLL 128 (364)
Q Consensus 63 lVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~~~~~~~~~~~d~v~~~~ 128 (364)
=++|+|.+|+++++.|.+.++.+.+.+|++++.+.+.+..... ..+.. +..+..|.|+-++
T Consensus 3 gfIG~G~mg~~l~~~L~~~~~~~~v~~R~~~~~~~l~~~~~~~-~~~~~----~~~~~~DiVil~v 63 (153)
T d2i76a2 3 NFVGTGTLTRFFLECLKDRYEIGYILSRSIDRARNLAEVYGGK-AATLE----KHPELNGVVFVIV 63 (153)
T ss_dssp EEESCCHHHHHHHHTTC----CCCEECSSHHHHHHHHHHTCCC-CCSSC----CCCC---CEEECS
T ss_pred EEEeCcHHHHHHHHHHHhCCCEEEEEeCChhhhcchhhccccc-ccchh----hhhccCcEEEEec
Confidence 4679999999999988665554568899998887776533221 11211 4566778877655
|
| >d1cjca2 c.4.1.1 (A:6-106,A:332-460) Adrenodoxin reductase of mitochondrial p450 systems {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: N-terminal domain of adrenodoxin reductase-like domain: Adrenodoxin reductase of mitochondrial p450 systems species: Cow (Bos taurus) [TaxId: 9913]
Probab=89.28 E-value=0.15 Score=40.15 Aligned_cols=34 Identities=15% Similarity=0.145 Sum_probs=30.0
Q ss_pred CeEEEEcCChhhHHHHHHHHhC--CCEEEEEEeCch
Q 017914 60 NRMLILGMGFVGRIFAEKIKNQ--GWVVSGTCTNVM 93 (364)
Q Consensus 60 ~~vlVtGtG~iG~~l~~~L~~~--g~~V~~~~r~~~ 93 (364)
++|.|+|+|.-|-..+.+|.+. |++|+++.+.+.
T Consensus 2 ~kv~iIGaGpaGl~aA~~L~~~~~~~~V~v~e~~~~ 37 (230)
T d1cjca2 2 PQICVVGSGPAGFYTAQHLLKHHSRAHVDIYEKQLV 37 (230)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSSCEEEEECSSSS
T ss_pred CeEEEECccHHHHHHHHHHHhcCCCCeEEEEeCCCC
Confidence 4899999999999999999875 799999988754
|
| >d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: 2,4-dienoyl-CoA reductase species: Yeast (Candida tropicalis) [TaxId: 5482]
Probab=89.22 E-value=0.25 Score=37.65 Aligned_cols=40 Identities=13% Similarity=0.056 Sum_probs=32.8
Q ss_pred CCCCeEEEE-c-CChhhHHHHHHHHhCCCEEEEEEeCchhhh
Q 017914 57 QSPNRMLIL-G-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKK 96 (364)
Q Consensus 57 ~~~~~vlVt-G-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~ 96 (364)
..+.+|+|. | +|.+|...++.....|.+|++.+|+.++.+
T Consensus 27 ~~g~~vli~~ga~g~vG~~aiqlAk~~Ga~vI~~v~~~~~~~ 68 (189)
T d1gu7a2 27 TPGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLD 68 (189)
T ss_dssp CTTTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHH
T ss_pred CCCCEEEEEeCCCchHHHHHHHHHhhcCCeEEEEEecccccc
Confidence 345678886 6 899999999999999999999998766543
|
| >d1gtea3 c.3.1.1 (A:288-440) Dihydropyrimidine dehydrogenase, domain 3 {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: C-terminal domain of adrenodoxin reductase-like domain: Dihydropyrimidine dehydrogenase, domain 3 species: Pig (Sus scrofa) [TaxId: 9823]
Probab=89.18 E-value=0.33 Score=35.63 Aligned_cols=37 Identities=16% Similarity=0.022 Sum_probs=30.6
Q ss_pred CCCCeEEEEcCChhhHHHHHHHHhCCC-EEEEEEeCch
Q 017914 57 QSPNRMLILGMGFVGRIFAEKIKNQGW-VVSGTCTNVM 93 (364)
Q Consensus 57 ~~~~~vlVtGtG~iG~~l~~~L~~~g~-~V~~~~r~~~ 93 (364)
..+++|+|+|.|.+|--.+..+.+.|. .|+++.|.+.
T Consensus 43 ~~~~kVvVIGGGdtA~D~A~~a~r~GA~~V~vi~rr~~ 80 (153)
T d1gtea3 43 SIRGAVIVLGAGDTAFDCATSALRCGARRVFLVFRKGF 80 (153)
T ss_dssp CCCSEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSCG
T ss_pred cCCCEEEEECCChhHHHHHHHHHHcCCcceeEEEeCCh
Confidence 345789999999999999999999986 5778877543
|
| >d1xeaa1 c.2.1.3 (A:2-122,A:267-312) Putative oxidoreductase VCA1048 {Vibrio cholerae [TaxId: 666]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Putative oxidoreductase VCA1048 species: Vibrio cholerae [TaxId: 666]
Probab=89.12 E-value=0.43 Score=35.41 Aligned_cols=64 Identities=8% Similarity=0.061 Sum_probs=39.4
Q ss_pred CeEEEEcCChhhHH-HHHHHHhC-CCEEEEEEeCchhhhhhhh-CCceEEEccCChhhHHhh-ccCceeeEE
Q 017914 60 NRMLILGMGFVGRI-FAEKIKNQ-GWVVSGTCTNVMKKKELEQ-SGFDVHLFNANETALMIL-TTLKNYTHL 127 (364)
Q Consensus 60 ~~vlVtGtG~iG~~-l~~~L~~~-g~~V~~~~r~~~~~~~l~~-~~~~~~~~D~~~~~~~~~-~~~d~v~~~ 127 (364)
+||.|+|.|.+|+. .+..|.+. +.++++++++++....+.+ .++..+..|+.+ .+ .++|+|+.+
T Consensus 2 irvgiiG~G~~~~~~~~~~l~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~----ll~~~iD~V~I~ 69 (167)
T d1xeaa1 2 LKIAMIGLGDIAQKAYLPVLAQWPDIELVLCTRNPKVLGTLATRYRVSATCTDYRD----VLQYGVDAVMIH 69 (167)
T ss_dssp EEEEEECCCHHHHHTHHHHHTTSTTEEEEEECSCHHHHHHHHHHTTCCCCCSSTTG----GGGGCCSEEEEC
T ss_pred eEEEEEcCCHHHHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHhcccccccccHHH----hcccccceeccc
Confidence 68999999999976 45666555 5687777787766655432 233322333332 22 357776643
|
| >d2blna2 c.65.1.1 (A:1-203) Polymyxin resistance protein ArnA, N-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Formyltransferase superfamily: Formyltransferase family: Formyltransferase domain: Polymyxin resistance protein ArnA, N-terminal domain species: Escherichia coli [TaxId: 562]
Probab=88.47 E-value=0.25 Score=38.23 Aligned_cols=31 Identities=16% Similarity=0.250 Sum_probs=27.5
Q ss_pred CeEEEEcCChhhHHHHHHHHhCCCEEEEEEe
Q 017914 60 NRMLILGMGFVGRIFAEKIKNQGWVVSGTCT 90 (364)
Q Consensus 60 ~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r 90 (364)
|||+|+|++..|..+++.|.+.|++|.++.-
T Consensus 1 Mkiv~~~~~~~g~~~l~~L~~~g~~I~~Vvt 31 (203)
T d2blna2 1 MKTVVFAYHDMGCLGIEALLAAGYEISAIFT 31 (203)
T ss_dssp CEEEEEECHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CeEEEEecCHHHHHHHHHHHHCCCCEEEEEc
Confidence 7899999777899999999999999987664
|
| >d1fmta2 c.65.1.1 (A:1-206) Methionyl-tRNAfmet formyltransferase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Formyltransferase superfamily: Formyltransferase family: Formyltransferase domain: Methionyl-tRNAfmet formyltransferase species: Escherichia coli [TaxId: 562]
Probab=88.37 E-value=0.36 Score=37.34 Aligned_cols=34 Identities=18% Similarity=0.224 Sum_probs=29.3
Q ss_pred CCCeEEEEcCChhhHHHHHHHHhCCCEEEEEEeC
Q 017914 58 SPNRMLILGMGFVGRIFAEKIKNQGWVVSGTCTN 91 (364)
Q Consensus 58 ~~~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~ 91 (364)
.+|||+++|++..+..+.+.|.+.|++|.++.-.
T Consensus 2 ~~mKI~f~G~~~~~~~~L~~L~~~~~~i~~Vit~ 35 (206)
T d1fmta2 2 ESLRIIFAGTPDFAARHLDALLSSGHNVVGVFTQ 35 (206)
T ss_dssp CCCEEEEEECSHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CCcEEEEECCCHHHHHHHHHHHhCCCCEEEEEeC
Confidence 3589999999999999999999999998876643
|
| >d1edza1 c.2.1.7 (A:149-319) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=88.37 E-value=0.31 Score=36.44 Aligned_cols=36 Identities=22% Similarity=0.287 Sum_probs=32.1
Q ss_pred CCCCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeC
Q 017914 56 WQSPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTN 91 (364)
Q Consensus 56 ~~~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~ 91 (364)
...+++|+|+| +.-+|+-++..|+++|..|+.....
T Consensus 26 ~l~GK~vvVIGrS~iVG~Pla~lL~~~gaTVt~~~~~ 62 (171)
T d1edza1 26 RLYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVN 62 (171)
T ss_dssp TTTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSS
T ss_pred CCCCCEEEEECCccccHHHHHHHHHHCCCEEEEeccc
Confidence 46789999999 8999999999999999999877654
|
| >d1up7a1 c.2.1.5 (A:1-162) 6-phospho-beta-glucosidase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: 6-phospho-beta-glucosidase species: Thermotoga maritima [TaxId: 2336]
Probab=88.31 E-value=0.4 Score=35.50 Aligned_cols=67 Identities=16% Similarity=-0.002 Sum_probs=40.5
Q ss_pred CeEEEEcCChhhHHHHHH-HHh-C----CCEEEEEEeCchhhhhhh-------hCCceEEEccCChhhHHhhccCceeeE
Q 017914 60 NRMLILGMGFVGRIFAEK-IKN-Q----GWVVSGTCTNVMKKKELE-------QSGFDVHLFNANETALMILTTLKNYTH 126 (364)
Q Consensus 60 ~~vlVtGtG~iG~~l~~~-L~~-~----g~~V~~~~r~~~~~~~l~-------~~~~~~~~~D~~~~~~~~~~~~d~v~~ 126 (364)
|||.|+|+|.+|...+-. |++ . +.++..++.++++..... .....+.. +....+.++++|+|+.
T Consensus 1 mKIaiIGaGs~g~~~~~~~l~~~~~~~~~~el~L~Did~~k~~~~~d~~~~~~~~~~~~~~---t~~~~~~l~~aDvVVi 77 (162)
T d1up7a1 1 MRIAVIGGGSSYTPELVKGLLDISEDVRIDEVIFYDIDEEKQKIVVDFVKRLVKDRFKVLI---SDTFEGAVVDAKYVIF 77 (162)
T ss_dssp CEEEEETTTCTTHHHHHHHHHHHTTTSCCCEEEEECSCHHHHHHHHHHHHHHHTTSSEEEE---CSSHHHHHTTCSEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHHhcccccCccEEEEEecCcHHHHHHHHHHHhhhccCceEEE---ecCcccccCCCCEEEE
Confidence 689999988777666533 222 1 358999999877654321 12222222 1112267788888888
Q ss_pred EEE
Q 017914 127 LLV 129 (364)
Q Consensus 127 ~~~ 129 (364)
.++
T Consensus 78 ta~ 80 (162)
T d1up7a1 78 QFR 80 (162)
T ss_dssp CCC
T ss_pred ecc
Confidence 764
|
| >d3coxa1 c.3.1.2 (A:5-318,A:451-506) Cholesterol oxidase of GMC family {Brevibacterium sterolicum [TaxId: 1702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Cholesterol oxidase of GMC family species: Brevibacterium sterolicum [TaxId: 1702]
Probab=88.28 E-value=0.18 Score=42.93 Aligned_cols=31 Identities=19% Similarity=0.323 Sum_probs=28.9
Q ss_pred eEEEEcCChhhHHHHHHHHhCCCEEEEEEeC
Q 017914 61 RMLILGMGFVGRIFAEKIKNQGWVVSGTCTN 91 (364)
Q Consensus 61 ~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~ 91 (364)
-|+|+|+|+-|..++.+|.++|++|.++-+.
T Consensus 9 dvIVVGsG~aG~v~A~rLaeaG~~VlvLEaG 39 (370)
T d3coxa1 9 PALVIGSGYGGAVAALRLTQAGIPTQIVEMG 39 (370)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred CEEEECcCHHHHHHHHHHHHCCCeEEEEeCC
Confidence 4899999999999999999999999999874
|
| >d2f5va1 c.3.1.2 (A:43-354,A:553-619) Pyranose 2-oxidase {White-rot fungus (Peniophora sp. SG) [TaxId: 204723]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Pyranose 2-oxidase species: White-rot fungus (Peniophora sp. SG) [TaxId: 204723]
Probab=88.23 E-value=0.21 Score=42.31 Aligned_cols=31 Identities=23% Similarity=0.416 Sum_probs=28.8
Q ss_pred eEEEEcCChhhHHHHHHHHhCCCEEEEEEeC
Q 017914 61 RMLILGMGFVGRIFAEKIKNQGWVVSGTCTN 91 (364)
Q Consensus 61 ~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~ 91 (364)
-|+|+|+|.-|..++.+|.+.|++|.++-+.
T Consensus 6 DviIVGsG~aG~v~A~~La~~G~kVlvLEaG 36 (379)
T d2f5va1 6 DVVIVGSGPIGCTYARELVGAGYKVAMFDIG 36 (379)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred cEEEECcCHHHHHHHHHHhhCCCeEEEEecC
Confidence 4899999999999999999999999999874
|
| >d1y8ca_ c.66.1.43 (A:) Putative methyltransferase CAC2371 {Clostridium acetobutylicum [TaxId: 1488]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: CAC2371-like domain: Putative methyltransferase CAC2371 species: Clostridium acetobutylicum [TaxId: 1488]
Probab=87.99 E-value=0.13 Score=41.09 Aligned_cols=66 Identities=12% Similarity=-0.049 Sum_probs=44.5
Q ss_pred CCCeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCchhhhhhh------hCCceEEEccCChhhHHhhccCceeeEE
Q 017914 58 SPNRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELE------QSGFDVHLFNANETALMILTTLKNYTHL 127 (364)
Q Consensus 58 ~~~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~------~~~~~~~~~D~~~~~~~~~~~~d~v~~~ 127 (364)
..++||=+|+|. |+ ++..|.++|.+|++++.++.-.+... ..+++++.+|+.+.+. -+.+|.|+.+
T Consensus 37 ~~~~vLDiGCG~-G~-~~~~l~~~g~~v~GvD~S~~ml~~A~~~~~~~~~~v~~~~~d~~~~~~--~~~fD~i~~~ 108 (246)
T d1y8ca_ 37 VFDDYLDLACGT-GN-LTENLCPKFKNTWAVDLSQEMLSEAENKFRSQGLKPRLACQDISNLNI--NRKFDLITCC 108 (246)
T ss_dssp CTTEEEEETCTT-ST-THHHHGGGSSEEEEECSCHHHHHHHHHHHHHTTCCCEEECCCGGGCCC--SCCEEEEEEC
T ss_pred CCCeEEEEeCcC-CH-HHHHHHHhCCccEeeccchhhhhhccccccccCccceeeccchhhhcc--ccccccccee
Confidence 346899998552 33 45577788999999999876433221 1368899999987542 2457777754
|
| >d1f0ka_ c.87.1.2 (A:) Peptidoglycan biosynthesis glycosyltransferase MurG {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Peptidoglycan biosynthesis glycosyltransferase MurG domain: Peptidoglycan biosynthesis glycosyltransferase MurG species: Escherichia coli [TaxId: 562]
Probab=87.67 E-value=0.49 Score=39.29 Aligned_cols=51 Identities=24% Similarity=0.478 Sum_probs=31.6
Q ss_pred CeEEEE-c-C-Chh--hHHHHHHHHhCCCEEEEEEeCchhh-hhhhhCCceEEEccC
Q 017914 60 NRMLIL-G-M-GFV--GRIFAEKIKNQGWVVSGTCTNVMKK-KELEQSGFDVHLFNA 110 (364)
Q Consensus 60 ~~vlVt-G-t-G~i--G~~l~~~L~~~g~~V~~~~r~~~~~-~~l~~~~~~~~~~D~ 110 (364)
|||||+ | | |.+ +..|+++|.++||+|..++...... .-+...+..+...+.
T Consensus 1 kkili~~~GtGGHv~~a~al~~~L~~~G~eV~~i~~~~~~~~~~~~~~~~~~~~~~~ 57 (351)
T d1f0ka_ 1 KRLMVMAGGTGGHVFPGLAVAHHLMAQGWQVRWLGTADRMEADLVPKHGIEIDFIRI 57 (351)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHTTTCEEEEEECTTSTHHHHGGGGTCEEEECCC
T ss_pred CEEEEEcCCcHHHHHHHHHHHHHHHhCCCEEEEEEeCCcchhhcccccCCcEEEEEC
Confidence 588998 3 5 444 4458899999999999887543221 223334555544443
|
| >d1g8sa_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Fibrillarin homologue domain: Fibrillarin homologue species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=87.55 E-value=1.2 Score=34.99 Aligned_cols=58 Identities=19% Similarity=0.126 Sum_probs=43.0
Q ss_pred CCCCCeEEEEc--CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhh-----hCCceEEEccCChhhH
Q 017914 56 WQSPNRMLILG--MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELE-----QSGFDVHLFNANETAL 115 (364)
Q Consensus 56 ~~~~~~vlVtG--tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~-----~~~~~~~~~D~~~~~~ 115 (364)
...+++||=+| +|+.-.+|++. ... -.|++++.++.-...+. ..++..+.+|..++..
T Consensus 72 ikpG~~VLDlGcGsG~~~~~la~~-~~~-g~V~aVDiS~~~i~~a~~~a~~~~ni~~i~~d~~~~~~ 136 (230)
T d1g8sa_ 72 IKRDSKILYLGASAGTTPSHVADI-ADK-GIVYAIEYAPRIMRELLDACAERENIIPILGDANKPQE 136 (230)
T ss_dssp CCTTCEEEEESCCSSHHHHHHHHH-TTT-SEEEEEESCHHHHHHHHHHTTTCTTEEEEECCTTCGGG
T ss_pred CCCCCEEEEeCEEcCHHHHHHHHh-CCC-CEEEEEeCcHHHHHHHHHHHhhhcccceEEEeeccCcc
Confidence 45678999998 69888888875 333 49999999886554433 2567888888888663
|
| >d2i6ga1 c.66.1.44 (A:1-198) Putative methyltransferase TehB {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: TehB-like domain: Putative methyltransferase TehB species: Salmonella typhimurium [TaxId: 90371]
Probab=87.28 E-value=1.2 Score=33.75 Aligned_cols=65 Identities=23% Similarity=0.276 Sum_probs=42.4
Q ss_pred CCCeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCchhhhhhh----h---CCceEEEccCChhhHHhhccCceeeE
Q 017914 58 SPNRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELE----Q---SGFDVHLFNANETALMILTTLKNYTH 126 (364)
Q Consensus 58 ~~~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~----~---~~~~~~~~D~~~~~~~~~~~~d~v~~ 126 (364)
...+||=+|+| .|+ .+..|.++|++|++++.++.-.+... . ..+++...|+.+... -..+|.|+.
T Consensus 30 ~~grvLDiGcG-~G~-~~~~la~~g~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~d~~~~~~--~~~fD~I~~ 101 (198)
T d2i6ga1 30 APGRTLDLGCG-NGR-NSLYLAANGYDVTAWDKNPASMANLERIKAAEGLDNLQTDLVDLNTLTF--DGEYDFILS 101 (198)
T ss_dssp CSCEEEEETCT-TSH-HHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCTTEEEEECCTTTCCC--CCCEEEEEE
T ss_pred CCCcEEEECCC-CCH-HHHHHHHHhhhhccccCcHHHHHHHHHHhhhccccchhhhheecccccc--cccccEEEE
Confidence 34589999976 355 45577788999999999876544321 1 345677777776432 244676664
|
| >d1np3a2 c.2.1.6 (A:1-182) Class I ketol-acid reductoisomerase (KARI) {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Class I ketol-acid reductoisomerase (KARI) species: Pseudomonas aeruginosa [TaxId: 287]
Probab=87.10 E-value=0.63 Score=34.60 Aligned_cols=65 Identities=18% Similarity=0.179 Sum_probs=49.4
Q ss_pred CCCeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCchh-hhhhhhCCceEEEccCChhhHHhhccCceeeEEE
Q 017914 58 SPNRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMK-KKELEQSGFDVHLFNANETALMILTTLKNYTHLL 128 (364)
Q Consensus 58 ~~~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~~-~~~l~~~~~~~~~~D~~~~~~~~~~~~d~v~~~~ 128 (364)
..++|.|+|-|--|++=+..|...|.+|++-.|.... .+..+..+.++... + ++.+..|.|..+.
T Consensus 15 k~k~IaViGYGsQG~AhAlNLrDSG~~V~VGLr~gs~s~~~A~~~Gf~v~~~-----~-eA~~~aDiim~L~ 80 (182)
T d1np3a2 15 QGKKVAIIGYGSQGHAHACNLKDSGVDVTVGLRSGSATVAKAEAHGLKVADV-----K-TAVAAADVVMILT 80 (182)
T ss_dssp HTSCEEEECCSHHHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHTTCEEECH-----H-HHHHTCSEEEECS
T ss_pred CCCEEEEEeeCcHhHHHHhhhhhcCCCEEEEcCCCCccHHHHhhhccccccH-----H-HHhhhcCeeeeec
Confidence 4689999999999999999999999999998886543 23334467665321 1 5677888888876
|
| >d1y0pa2 c.3.1.4 (A:111-361,A:512-568) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella frigidimarina [TaxId: 56812]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain domain: Flavocytochrome c3 (respiratory fumarate reductase) species: Shewanella frigidimarina [TaxId: 56812]
Probab=86.85 E-value=0.25 Score=40.77 Aligned_cols=32 Identities=19% Similarity=0.102 Sum_probs=29.8
Q ss_pred eEEEEcCChhhHHHHHHHHhCCCEEEEEEeCc
Q 017914 61 RMLILGMGFVGRIFAEKIKNQGWVVSGTCTNV 92 (364)
Q Consensus 61 ~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~ 92 (364)
-|+|+|+|..|-..+..|.++|.+|+++.+.+
T Consensus 18 DVlVIG~G~aGl~aA~~la~~G~~V~lvEK~~ 49 (308)
T d1y0pa2 18 DVVVVGSGGAGFSAAISATDSGAKVILIEKEP 49 (308)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CEEEECcCHHHHHHHHHHHHCCCcEEEEecCC
Confidence 59999999999999999999999999998864
|
| >d1g8aa_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Fibrillarin homologue domain: Fibrillarin homologue species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=86.69 E-value=1.3 Score=34.53 Aligned_cols=93 Identities=12% Similarity=0.011 Sum_probs=59.6
Q ss_pred CCCCCeEEEEc--CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhh-----CCceEEEccCChhhH--HhhccCceeeE
Q 017914 56 WQSPNRMLILG--MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQ-----SGFDVHLFNANETAL--MILTTLKNYTH 126 (364)
Q Consensus 56 ~~~~~~vlVtG--tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~-----~~~~~~~~D~~~~~~--~~~~~~d~v~~ 126 (364)
...+++||=+| +|..-.+|++..-.. -.|++++.++.....+.. .++..+.+|..+++. .....+|.|++
T Consensus 71 i~pG~~VLDlGaGsG~~t~~la~~VG~~-G~V~aVD~s~~~l~~a~~~a~~~~~~~~i~~d~~~~~~~~~~~~~vD~i~~ 149 (227)
T d1g8aa_ 71 IKPGKSVLYLGIASGTTASHVSDIVGWE-GKIFGIEFSPRVLRELVPIVEERRNIVPILGDATKPEEYRALVPKVDVIFE 149 (227)
T ss_dssp CCTTCEEEEETTTSTTHHHHHHHHHCTT-SEEEEEESCHHHHHHHHHHHSSCTTEEEEECCTTCGGGGTTTCCCEEEEEE
T ss_pred cCCCCEEEEeccCCCHHHHHHHHHhCCC-CEEEEEeCcHHHHHHHHHHHHhcCCceEEEEECCCcccccccccceEEEEE
Confidence 35678999997 698888888865444 489999998876554422 457788899888664 23355666655
Q ss_pred EEEecCCCCCCCChhhhHHHHHHHHhhcCC
Q 017914 127 LLVSIPPLEGTGDPMLKHGELLRSTLMNGH 156 (364)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~ 156 (364)
.... .+.......++...++..|
T Consensus 150 d~~~-------~~~~~~~l~~~~~~LkpgG 172 (227)
T d1g8aa_ 150 DVAQ-------PTQAKILIDNAEVYLKRGG 172 (227)
T ss_dssp CCCS-------TTHHHHHHHHHHHHEEEEE
T ss_pred Eccc-------cchHHHHHHHHHHhcccCC
Confidence 3321 2223334455555565554
|
| >d1pn0a1 c.3.1.2 (A:1-240,A:342-461) Phenol hydroxylase {Soil-living yeast (Trichosporon cutaneum) [TaxId: 5554]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Phenol hydroxylase species: Soil-living yeast (Trichosporon cutaneum) [TaxId: 5554]
Probab=86.62 E-value=0.23 Score=41.73 Aligned_cols=34 Identities=24% Similarity=0.234 Sum_probs=29.5
Q ss_pred eEEEEcCChhhHHHHHHHH-----hCCCEEEEEEeCchh
Q 017914 61 RMLILGMGFVGRIFAEKIK-----NQGWVVSGTCTNVMK 94 (364)
Q Consensus 61 ~vlVtGtG~iG~~l~~~L~-----~~g~~V~~~~r~~~~ 94 (364)
-|+|+|+|..|..++..|. ++|++|+++.|.+..
T Consensus 9 DV~IvGaG~aGl~lA~~La~~~~~~~G~~v~vlEr~~~~ 47 (360)
T d1pn0a1 9 DVLIVGAGPAGLMAARVLSEYVRQKPDLKVRIIDKRSTK 47 (360)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEECSSSSC
T ss_pred CEEEECcCHHHHHHHHHHHhcccccCCCcEEEEcCCCCC
Confidence 4999999999999999996 479999999987543
|
| >d1r18a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Protein-L-isoaspartyl O-methyltransferase domain: Protein-L-isoaspartyl O-methyltransferase species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=86.42 E-value=1.1 Score=35.01 Aligned_cols=72 Identities=13% Similarity=0.083 Sum_probs=49.9
Q ss_pred CCCCeEEEEc--CChhhHHHHHHHHhCC----CEEEEEEeCchhhhhh------------hhCCceEEEccCChhhHHhh
Q 017914 57 QSPNRMLILG--MGFVGRIFAEKIKNQG----WVVSGTCTNVMKKKEL------------EQSGFDVHLFNANETALMIL 118 (364)
Q Consensus 57 ~~~~~vlVtG--tG~iG~~l~~~L~~~g----~~V~~~~r~~~~~~~l------------~~~~~~~~~~D~~~~~~~~~ 118 (364)
..+.+||.+| ||+....+++.+...| .+|+++.+.++-.... .-.++.++.+|..+.. ...
T Consensus 79 ~~g~~VLeIGtGsGY~ta~la~l~g~~g~~~~~~V~~iE~~~~l~~~a~~~l~~~~~~~~~~~nv~~~~~d~~~~~-~~~ 157 (223)
T d1r18a_ 79 KPGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGDGRKGY-PPN 157 (223)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESCGGGCC-GGG
T ss_pred CCCCeEEEecCCCCHHHHHHHHHhhhccCCcccEEEEEecCHHHHHHHHHhhhhcchhhcCccEEEEEeccccccc-ccc
Confidence 4568999997 6999888888888777 4899999876432211 1247888889887633 234
Q ss_pred ccCceeeEEEE
Q 017914 119 TTLKNYTHLLV 129 (364)
Q Consensus 119 ~~~d~v~~~~~ 129 (364)
..+|.|+..++
T Consensus 158 ~~fD~Iiv~~a 168 (223)
T d1r18a_ 158 APYNAIHVGAA 168 (223)
T ss_dssp CSEEEEEECSC
T ss_pred cceeeEEEEee
Confidence 46787766554
|
| >d1gtma1 c.2.1.7 (A:181-419) Glutamate dehydrogenase {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamate dehydrogenase species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Probab=86.22 E-value=0.55 Score=37.18 Aligned_cols=36 Identities=19% Similarity=0.224 Sum_probs=30.4
Q ss_pred CCCCCeEEEEcCChhhHHHHHHHHh-CCCEEEEEEeC
Q 017914 56 WQSPNRMLILGMGFVGRIFAEKIKN-QGWVVSGTCTN 91 (364)
Q Consensus 56 ~~~~~~vlVtGtG~iG~~l~~~L~~-~g~~V~~~~r~ 91 (364)
...+++|+|-|-|.+|+++++.|.+ .|..|++++-.
T Consensus 29 ~l~g~~v~IqGfGnVG~~~a~~L~~~~G~kvv~vsD~ 65 (239)
T d1gtma1 29 TLKGKTIAIQGYGNAGYYLAKIMSEDFGMKVVAVSDS 65 (239)
T ss_dssp CSTTCEEEEECCSHHHHHHHHHHHHTTCCEEEEEECS
T ss_pred CcCCCEEEEECCCHHHHHHHHHHHHhcCcceeecccc
Confidence 3567899999999999999999986 49999888643
|
| >d2gqfa1 c.3.1.8 (A:1-194,A:343-401) Hypothetical protein HI0933 {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: HI0933 N-terminal domain-like domain: Hypothetical protein HI0933 species: Haemophilus influenzae [TaxId: 727]
Probab=86.05 E-value=0.3 Score=39.04 Aligned_cols=35 Identities=20% Similarity=0.222 Sum_probs=31.3
Q ss_pred CeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCchh
Q 017914 60 NRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMK 94 (364)
Q Consensus 60 ~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~~ 94 (364)
..|+|+|+|..|-..+-.|.++|++|.++.+++..
T Consensus 5 ~DViIIGaG~aGl~aA~~la~~G~~V~vlEk~~~~ 39 (253)
T d2gqfa1 5 SENIIIGAGAAGLFCAAQLAKLGKSVTVFDNGKKI 39 (253)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred CcEEEECcCHHHHHHHHHHHHCCCcEEEEecCCCC
Confidence 35999999999999999999999999999987643
|
| >d1gesa1 c.3.1.5 (A:3-146,A:263-335) Glutathione reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Escherichia coli [TaxId: 562]
Probab=85.58 E-value=0.38 Score=37.26 Aligned_cols=30 Identities=13% Similarity=0.038 Sum_probs=28.3
Q ss_pred EEEEcCChhhHHHHHHHHhCCCEEEEEEeC
Q 017914 62 MLILGMGFVGRIFAEKIKNQGWVVSGTCTN 91 (364)
Q Consensus 62 vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~ 91 (364)
|+|+|+|+.|-..+.++.+.|.+|.++.+.
T Consensus 5 vvVIG~G~aG~~aA~~a~~~G~kV~iiE~~ 34 (217)
T d1gesa1 5 YIAIGGGSGGIASINRAAMYGQKCALIEAK 34 (217)
T ss_dssp EEEECCSHHHHHHHHHHHTTTCCEEEEESS
T ss_pred EEEECCCHHHHHHHHHHHHCCCEEEEEecc
Confidence 789999999999999999999999999875
|
| >d1b7go1 c.2.1.3 (O:1-138,O:301-340) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Sulfolobus solfataricus [TaxId: 2287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Archaeon Sulfolobus solfataricus [TaxId: 2287]
Probab=85.56 E-value=0.38 Score=36.26 Aligned_cols=33 Identities=21% Similarity=0.336 Sum_probs=28.0
Q ss_pred CCeEEEEcCChhhHHHHHHHHhC-CCEEEEEEeC
Q 017914 59 PNRMLILGMGFVGRIFAEKIKNQ-GWVVSGTCTN 91 (364)
Q Consensus 59 ~~~vlVtGtG~iG~~l~~~L~~~-g~~V~~~~r~ 91 (364)
|-||.|.|.|-||+.+++.|.++ +.+|+++...
T Consensus 1 MIKVaINGfGRIGR~v~Ral~~~~dievVaInd~ 34 (178)
T d1b7go1 1 MVNVAVNGYGTIGKRVADAIIKQPDMKLVGVAKT 34 (178)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTCTTEEEEEEECS
T ss_pred CeEEEEECCCHHHHHHHHHHHhCCCCEEEEEECC
Confidence 45899999999999999999987 4788887653
|
| >d1lqta2 c.4.1.1 (A:2-108,A:325-456) Ferredoxin:NADP reductase FprA {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: N-terminal domain of adrenodoxin reductase-like domain: Ferredoxin:NADP reductase FprA species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=85.50 E-value=0.24 Score=39.00 Aligned_cols=34 Identities=15% Similarity=0.006 Sum_probs=30.2
Q ss_pred CeEEEEcCChhhHHHHHHHHhCC-------CEEEEEEeCch
Q 017914 60 NRMLILGMGFVGRIFAEKIKNQG-------WVVSGTCTNVM 93 (364)
Q Consensus 60 ~~vlVtGtG~iG~~l~~~L~~~g-------~~V~~~~r~~~ 93 (364)
.+|+|+|+|.-|-..+.+|.++| ++|+++.+.+.
T Consensus 3 ~~VaVIGaGpaGL~aA~~L~~~G~~~~~~~~~V~v~E~~~~ 43 (239)
T d1lqta2 3 YYIAIVGSGPSAFFAAASLLKAADTTEDLDMAVDMLEMLPT 43 (239)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEEEEESSSS
T ss_pred cEEEEECcCHHHHHHHHHHHHcCCccccCCCceEEEecCCC
Confidence 58999999999999999999987 48999998654
|
| >d1tlta1 c.2.1.3 (A:5-127,A:268-308) Virulence factor MviM {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Virulence factor MviM species: Escherichia coli [TaxId: 562]
Probab=85.48 E-value=0.42 Score=35.30 Aligned_cols=64 Identities=9% Similarity=0.160 Sum_probs=38.0
Q ss_pred CCeEEEEcCChhhHH-HHHHHHhC-CCEEEEEE-eCchhhhhhhh-CCceEEEccCChhhHHhhccCceeeEE
Q 017914 59 PNRMLILGMGFVGRI-FAEKIKNQ-GWVVSGTC-TNVMKKKELEQ-SGFDVHLFNANETALMILTTLKNYTHL 127 (364)
Q Consensus 59 ~~~vlVtGtG~iG~~-l~~~L~~~-g~~V~~~~-r~~~~~~~l~~-~~~~~~~~D~~~~~~~~~~~~d~v~~~ 127 (364)
+++|.|+|+|.+|+. .+..|.+. +.+++++. ++.++...+.. .++. ..+.....+.++|+|+.+
T Consensus 1 Kiri~iIG~G~~g~~~~~~~l~~~~~~~i~~v~d~~~~~~~~~~~~~~~~-----~~~~~~~l~~~~D~V~I~ 68 (164)
T d1tlta1 1 KLRIGVVGLGGIAQKAWLPVLAAASDWTLQGAWSPTRAKALPICESWRIP-----YADSLSSLAASCDAVFVH 68 (164)
T ss_dssp CEEEEEECCSTHHHHTHHHHHHSCSSEEEEEEECSSCTTHHHHHHHHTCC-----BCSSHHHHHTTCSEEEEC
T ss_pred CCEEEEEcCCHHHHHHHHHHHHhCCCcEEEEEEechhHhhhhhhhccccc-----ccccchhhhhhccccccc
Confidence 368999999999976 45666554 67877654 66555444321 2322 222111345678877643
|
| >d1rp0a1 c.3.1.6 (A:7-284) Thiazole biosynthetic enzyme Thi4 {Thale cress(Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: Thi4-like domain: Thiazole biosynthetic enzyme Thi4 species: Thale cress(Arabidopsis thaliana) [TaxId: 3702]
Probab=84.94 E-value=0.38 Score=39.01 Aligned_cols=34 Identities=21% Similarity=0.205 Sum_probs=30.0
Q ss_pred CeEEEEcCChhhHHHHHHHHhC-CCEEEEEEeCch
Q 017914 60 NRMLILGMGFVGRIFAEKIKNQ-GWVVSGTCTNVM 93 (364)
Q Consensus 60 ~~vlVtGtG~iG~~l~~~L~~~-g~~V~~~~r~~~ 93 (364)
.-|+|+|+|.-|-..+..|.++ |++|.++.+.+.
T Consensus 34 ~DViVIGaGpaGL~aA~~LA~~~G~~V~vlE~~~~ 68 (278)
T d1rp0a1 34 TDVVVVGAGSAGLSAAYEISKNPNVQVAIIEQSVS 68 (278)
T ss_dssp EEEEEECCSHHHHHHHHHHHTSTTSCEEEEESSSS
T ss_pred CCEEEECCCHHHHHHHHHHHHccCCeEEEEecCCC
Confidence 3599999999999999999874 999999998754
|
| >d1d4ca2 c.3.1.4 (A:103-359,A:506-570) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella putrefaciens [TaxId: 24]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain domain: Flavocytochrome c3 (respiratory fumarate reductase) species: Shewanella putrefaciens [TaxId: 24]
Probab=84.20 E-value=0.38 Score=39.96 Aligned_cols=32 Identities=22% Similarity=0.167 Sum_probs=29.8
Q ss_pred eEEEEcCChhhHHHHHHHHhCCCEEEEEEeCc
Q 017914 61 RMLILGMGFVGRIFAEKIKNQGWVVSGTCTNV 92 (364)
Q Consensus 61 ~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~ 92 (364)
-|+|+|+|..|-..+..|.++|.+|+++.+.+
T Consensus 25 DVvVIG~G~aGl~aA~~la~~G~~V~llEk~~ 56 (322)
T d1d4ca2 25 DVVIIGSGGAGLAAAVSARDAGAKVILLEKEP 56 (322)
T ss_dssp SEEEECSSHHHHHHHHHHHTTTCCEEEECSSS
T ss_pred eEEEECcCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 59999999999999999999999999999864
|
| >d1iuka_ c.2.1.8 (A:) Hypothetical protein TT1466 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: CoA-binding domain domain: Hypothetical protein TT1466 species: Thermus thermophilus [TaxId: 274]
Probab=84.17 E-value=0.65 Score=33.16 Aligned_cols=33 Identities=15% Similarity=0.256 Sum_probs=28.4
Q ss_pred CCeEEEEc-C---ChhhHHHHHHHHhCCCEEEEEEeC
Q 017914 59 PNRMLILG-M---GFVGRIFAEKIKNQGWVVSGTCTN 91 (364)
Q Consensus 59 ~~~vlVtG-t---G~iG~~l~~~L~~~g~~V~~~~r~ 91 (364)
.++|.|+| + +..|..+++.|.+.||+++.+.-+
T Consensus 13 pksIAVVGaS~~~~k~g~~v~~~L~~~g~~~~~v~~~ 49 (136)
T d1iuka_ 13 AKTIAVLGAHKDPSRPAHYVPRYLREQGYRVLPVNPR 49 (136)
T ss_dssp CCEEEEETCCSSTTSHHHHHHHHHHHTTCEEEEECGG
T ss_pred CCeEEEEeecCCCCCchHHHHHHHhcCCCCceEEEec
Confidence 47899999 5 789999999999999998876544
|
| >d1w4xa2 c.3.1.5 (A:155-389) Phenylacetone monooxygenase {Thermobifida fusca [TaxId: 2021]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Phenylacetone monooxygenase species: Thermobifida fusca [TaxId: 2021]
Probab=84.11 E-value=0.55 Score=36.60 Aligned_cols=38 Identities=18% Similarity=0.046 Sum_probs=34.0
Q ss_pred CCCCCeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCch
Q 017914 56 WQSPNRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVM 93 (364)
Q Consensus 56 ~~~~~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~ 93 (364)
...+|+|+|+|+|.-|-.++..|.+.+.+++.+.|+..
T Consensus 29 ~~~gK~V~VvG~G~Sa~dia~~~~~~~~~~~~~~~~~~ 66 (235)
T d1w4xa2 29 DFSGQRVGVIGTGSSGIQVSPQIAKQAAELFVFQRTPH 66 (235)
T ss_dssp CCBTCEEEEECCSHHHHHHHHHHHHHBSEEEEEESSCC
T ss_pred CCCCCEEEEECCCccHHHHHHHHHhhhccccccccccc
Confidence 45789999999999999999999999999999988753
|
| >d1iira_ c.87.1.5 (A:) UDP-glucosyltransferase GtfB {Amycolatopsis orientalis [TaxId: 31958]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Gtf glycosyltransferase domain: UDP-glucosyltransferase GtfB species: Amycolatopsis orientalis [TaxId: 31958]
Probab=84.02 E-value=0.77 Score=38.58 Aligned_cols=48 Identities=19% Similarity=0.168 Sum_probs=32.6
Q ss_pred CeEEEE--cC-Chhh--HHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEc
Q 017914 60 NRMLIL--GM-GFVG--RIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLF 108 (364)
Q Consensus 60 ~~vlVt--Gt-G~iG--~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~ 108 (364)
||||++ || |.+- -.|+++|.++||+|+.++-. ...+.+.+.+++++..
T Consensus 1 mkil~~~~gt~Gh~~P~lala~~L~~~Gh~V~~~~~~-~~~~~v~~~g~~~~~i 53 (401)
T d1iira_ 1 MRVLLATCGSRGDTEPLVALAVRVRDLGADVRMCAPP-DCAERLAEVGVPHVPV 53 (401)
T ss_dssp CEEEEECCSCHHHHHHHHHHHHHHHHTTCEEEEEECG-GGHHHHHHTTCCEEEC
T ss_pred CEEEEECCCChhHHHHHHHHHHHHHHCCCEEEEEeCc-chHHHHHHcCCeEEEC
Confidence 688888 34 5443 35789999999999988843 3333455566666653
|
| >d1m6ia1 c.3.1.5 (A:128-263,A:401-477) Apoptosis-inducing factor (AIF) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Apoptosis-inducing factor (AIF) species: Human (Homo sapiens) [TaxId: 9606]
Probab=83.99 E-value=0.38 Score=37.39 Aligned_cols=32 Identities=19% Similarity=0.135 Sum_probs=27.3
Q ss_pred CeEEEEcCChhhHHHHHHHHhCCC--EEEEEEeC
Q 017914 60 NRMLILGMGFVGRIFAEKIKNQGW--VVSGTCTN 91 (364)
Q Consensus 60 ~~vlVtGtG~iG~~l~~~L~~~g~--~V~~~~r~ 91 (364)
..++|+|+|++|-.++..|.+.|+ +|+++++.
T Consensus 5 ~~~vIvG~G~aG~~~A~~Lr~~~~~~~I~li~~e 38 (213)
T d1m6ia1 5 VPFLLIGGGTAAFAAARSIRARDPGARVLIVSED 38 (213)
T ss_dssp EEEEEESCSHHHHHHHHHHHHHSTTCEEEEEESS
T ss_pred CCEEEECCcHHHHHHHHHHHhcCCCCcEEEEeCC
Confidence 368899999999999999998875 68888764
|
| >d1ydwa1 c.2.1.3 (A:6-133,A:305-360) Probable oxidoreductase At4g09670 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Probable oxidoreductase At4g09670 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=83.94 E-value=0.49 Score=35.70 Aligned_cols=39 Identities=21% Similarity=0.290 Sum_probs=30.4
Q ss_pred CeEEEEcCChhhHHHHHHHHhC-CCEEEEE-EeCchhhhhh
Q 017914 60 NRMLILGMGFVGRIFAEKIKNQ-GWVVSGT-CTNVMKKKEL 98 (364)
Q Consensus 60 ~~vlVtGtG~iG~~l~~~L~~~-g~~V~~~-~r~~~~~~~l 98 (364)
+||.|+|+|.+|+..++.|... +.+|+++ +++.++...+
T Consensus 2 iki~iIG~G~~g~~~~~~l~~~~~~~i~ai~d~~~~~~~~~ 42 (184)
T d1ydwa1 2 IRIGVMGCADIARKVSRAIHLAPNATISGVASRSLEKAKAF 42 (184)
T ss_dssp EEEEEESCCTTHHHHHHHHHHCTTEEEEEEECSSHHHHHHH
T ss_pred eEEEEEcCCHHHHHHHHHHHhCCCCEEEEEEeCCccccccc
Confidence 5899999999999999999876 6788865 5666554443
|
| >d1b26a1 c.2.1.7 (A:179-412) Glutamate dehydrogenase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamate dehydrogenase species: Thermotoga maritima [TaxId: 2336]
Probab=83.90 E-value=0.64 Score=36.68 Aligned_cols=35 Identities=23% Similarity=0.218 Sum_probs=30.0
Q ss_pred CCCCCeEEEEcCChhhHHHHHHHHh-CCCEEEEEEe
Q 017914 56 WQSPNRMLILGMGFVGRIFAEKIKN-QGWVVSGTCT 90 (364)
Q Consensus 56 ~~~~~~vlVtGtG~iG~~l~~~L~~-~g~~V~~~~r 90 (364)
...+++|+|=|.|.+|+++++.|.+ .|..|++++-
T Consensus 28 ~l~g~~vaIqG~GnVG~~~a~~L~~e~Ga~vv~vsd 63 (234)
T d1b26a1 28 DPKKATVAVQGFGNVGQFAALLISQELGSKVVAVSD 63 (234)
T ss_dssp CTTTCEEEEECCSHHHHHHHHHHHHHHCCEEEEEEE
T ss_pred CcCCCEEEEECCCHHHHHHHHHHHHhcCCceEEeec
Confidence 3567899999999999999999975 5999998874
|
| >d1wzna1 c.66.1.43 (A:1-251) Hypothetical methyltransferase PH1305 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: CAC2371-like domain: Hypothetical methyltransferase PH1305 species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=83.89 E-value=0.76 Score=36.28 Aligned_cols=65 Identities=17% Similarity=0.139 Sum_probs=44.1
Q ss_pred CCeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCchhhhhhh------hCCceEEEccCChhhHHhhccCceeeEE
Q 017914 59 PNRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELE------QSGFDVHLFNANETALMILTTLKNYTHL 127 (364)
Q Consensus 59 ~~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~------~~~~~~~~~D~~~~~~~~~~~~d~v~~~ 127 (364)
.++||=+|+|. |.. +..|.++|++|++++.++.-..... ..+++++.+|+.+..+. ..+|.|+..
T Consensus 42 ~~~iLDiGcGt-G~~-~~~l~~~~~~v~gvD~s~~mi~~a~~~~~~~~~~i~~~~~d~~~l~~~--~~fD~I~~~ 112 (251)
T d1wzna1 42 VRRVLDLACGT-GIP-TLELAERGYEVVGLDLHEEMLRVARRKAKERNLKIEFLQGDVLEIAFK--NEFDAVTMF 112 (251)
T ss_dssp CCEEEEETCTT-CHH-HHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCCEEEESCGGGCCCC--SCEEEEEEC
T ss_pred CCEEEEeCCCC-Ccc-chhhcccceEEEEEeeccccccccccccccccccchheehhhhhcccc--cccchHhhh
Confidence 46899998664 544 4567788999999999875443221 13688999999875421 356666554
|
| >d1byia_ c.37.1.10 (A:) Dethiobiotin synthetase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: P-loop containing nucleoside triphosphate hydrolases superfamily: P-loop containing nucleoside triphosphate hydrolases family: Nitrogenase iron protein-like domain: Dethiobiotin synthetase species: Escherichia coli [TaxId: 562]
Probab=83.34 E-value=0.43 Score=36.85 Aligned_cols=31 Identities=23% Similarity=0.420 Sum_probs=25.0
Q ss_pred CeEEEEcCC-hhhH-----HHHHHHHhCCCEEEEEEe
Q 017914 60 NRMLILGMG-FVGR-----IFAEKIKNQGWVVSGTCT 90 (364)
Q Consensus 60 ~~vlVtGtG-~iG~-----~l~~~L~~~g~~V~~~~r 90 (364)
|+++|+||| .+|+ .|++.|.++|++|.+++-
T Consensus 2 ~~~~i~gt~~GVGKTtvs~~La~aLa~~G~rVl~id~ 38 (224)
T d1byia_ 2 KRYFVTGTDTEVGKTVASCALLQAAKAAGYRTAGYKP 38 (224)
T ss_dssp EEEEEEESSTTSCHHHHHHHHHHHHHHTTCCEEEECS
T ss_pred ceEEEEECCCCccHHHHHHHHHHHHHHCCCeEEEECc
Confidence 689999976 5665 677888889999999863
|
| >d1dxla1 c.3.1.5 (A:4-152,A:276-347) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Garden pea (Pisum sativum) [TaxId: 3888]
Probab=82.64 E-value=0.49 Score=36.59 Aligned_cols=32 Identities=22% Similarity=0.214 Sum_probs=29.2
Q ss_pred eEEEEcCChhhHHHHHHHHhCCCEEEEEEeCc
Q 017914 61 RMLILGMGFVGRIFAEKIKNQGWVVSGTCTNV 92 (364)
Q Consensus 61 ~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~ 92 (364)
-|+|+|+|..|...+.++.+.|.+|.++.+..
T Consensus 5 DvvVIGgGpaGl~aA~~aa~~G~kV~vie~~~ 36 (221)
T d1dxla1 5 DVVIIGGGPGGYVAAIKAAQLGFKTTCIEKRG 36 (221)
T ss_dssp CEEEECCSHHHHHHHHHHHHHTCCEEEEECSS
T ss_pred CEEEECCCHHHHHHHHHHHHCCCcEEEEEecC
Confidence 48999999999999999999999999998753
|
| >d1jg1a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Protein-L-isoaspartyl O-methyltransferase domain: Protein-L-isoaspartyl O-methyltransferase species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Probab=82.64 E-value=1.4 Score=34.02 Aligned_cols=70 Identities=14% Similarity=-0.024 Sum_probs=45.0
Q ss_pred CCCCCeEEEEc--CChhhHHHHHHHHhCCCEEEEEEeCchhhhh----hh---hCCceEEEccCChhhHHhhccCceeeE
Q 017914 56 WQSPNRMLILG--MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKE----LE---QSGFDVHLFNANETALMILTTLKNYTH 126 (364)
Q Consensus 56 ~~~~~~vlVtG--tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~----l~---~~~~~~~~~D~~~~~~~~~~~~d~v~~ 126 (364)
...+.+||.+| ||+....+++ |. |-+|+++.+.++-... +. -.++.++.+|..+.. .....+|.|+.
T Consensus 76 l~~g~~VLeIGsGsGY~taila~-l~--g~~V~~ie~~~~l~~~a~~~l~~~g~~nv~~~~gd~~~g~-~~~~pfD~Iiv 151 (215)
T d1jg1a_ 76 LKPGMNILEVGTGSGWNAALISE-IV--KTDVYTIERIPELVEFAKRNLERAGVKNVHVILGDGSKGF-PPKAPYDVIIV 151 (215)
T ss_dssp CCTTCCEEEECCTTSHHHHHHHH-HH--CSCEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCC-GGGCCEEEEEE
T ss_pred cCccceEEEecCCCChhHHHHHH-hh--CceeEEEeccHHHHHHHHHHHHHcCCceeEEEECccccCC-cccCcceeEEe
Confidence 34568999997 6887665554 43 4569999987643322 11 257889999987633 23455787776
Q ss_pred EEE
Q 017914 127 LLV 129 (364)
Q Consensus 127 ~~~ 129 (364)
.++
T Consensus 152 ~~a 154 (215)
T d1jg1a_ 152 TAG 154 (215)
T ss_dssp CSB
T ss_pred ecc
Confidence 543
|
| >d1jzta_ c.104.1.1 (A:) Hypothetical protein YNL200c (YNU0_YEAST) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: YjeF N-terminal domain-like superfamily: YjeF N-terminal domain-like family: YjeF N-terminal domain-like domain: Hypothetical protein YNL200c (YNU0 YEAST) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=82.21 E-value=1.9 Score=34.02 Aligned_cols=81 Identities=11% Similarity=0.045 Sum_probs=46.9
Q ss_pred CCeEEEE-c---CChhhHHHHHHHHhCCCEEEEEEeCchhhhh--------hhhCCceEEEccCChhh-HHhhccCceee
Q 017914 59 PNRMLIL-G---MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKE--------LEQSGFDVHLFNANETA-LMILTTLKNYT 125 (364)
Q Consensus 59 ~~~vlVt-G---tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~--------l~~~~~~~~~~D~~~~~-~~~~~~~d~v~ 125 (364)
.++|+|+ | +|.=|-.+++.|.+.|++|.++......... +...++.....+-.+.. .......|.|+
T Consensus 55 ~~~vlil~G~GNNGGDGl~~Ar~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~iV 134 (243)
T d1jzta_ 55 GKHVFVIAGPGNNGGDGLVCARHLKLFGYNPVVFYPKRSERTEFYKQLVHQLNFFKVPVLSQDEGNWLEYLKPEKTLCIV 134 (243)
T ss_dssp TCEEEEEECSSHHHHHHHHHHHHHHHTTCCEEEECCCCCTTCHHHHHHHHHHHHTTCCEECSSTTCGGGGGSTTTEEEEE
T ss_pred CCeEEEEECCCCccHHHHHHHHHHHhcCCeeEEEEeCCCcCCHHHHHHHHHHHHCCCceecccccchhhccccccccEEE
Confidence 3567777 5 5888999999999999998877643321111 12234444433322211 12345677787
Q ss_pred EEEEecCCCCCCCC
Q 017914 126 HLLVSIPPLEGTGD 139 (364)
Q Consensus 126 ~~~~~~~~~~~~~~ 139 (364)
.....++......+
T Consensus 135 Dal~G~Gl~~~l~~ 148 (243)
T d1jzta_ 135 DAIFGFSFKPPMRE 148 (243)
T ss_dssp EESCCTTCCSSCCT
T ss_pred EeeecccccCcccH
Confidence 77766555433333
|
| >d2bisa1 c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Pyrococcus abyssi [TaxId: 29292]
Probab=82.01 E-value=0.69 Score=39.66 Aligned_cols=31 Identities=23% Similarity=0.325 Sum_probs=24.0
Q ss_pred CeEEEEc-------CChhh---HHHHHHHHhCCCEEEEEEe
Q 017914 60 NRMLILG-------MGFVG---RIFAEKIKNQGWVVSGTCT 90 (364)
Q Consensus 60 ~~vlVtG-------tG~iG---~~l~~~L~~~g~~V~~~~r 90 (364)
||||+++ +|.+| ..|++.|.++||+|++++.
T Consensus 1 MkIl~~~~~~pP~~~GG~~~~~~~La~~L~~~Gh~V~Vvtp 41 (437)
T d2bisa1 1 MKVLLLGFEFLPVKVGGLAEALTAISEALASLGHEVLVFTP 41 (437)
T ss_dssp CEEEEECSCCTTCCSSSHHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred CEEEEECCccCCcccCCHHHHHHHHHHHHHHcCCEEEEEec
Confidence 6788875 25555 5678999999999999874
|
| >d1kdga1 c.3.1.2 (A:215-512,A:694-755) Flavoprotein domain of flavocytochrome cellobiose dehydrogenase (CDH), FAD-binding domain {Fungus (Phanerochaete chrysosporium) [TaxId: 5306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Flavoprotein domain of flavocytochrome cellobiose dehydrogenase (CDH), FAD-binding domain species: Fungus (Phanerochaete chrysosporium) [TaxId: 5306]
Probab=81.99 E-value=0.55 Score=39.72 Aligned_cols=31 Identities=26% Similarity=0.238 Sum_probs=28.6
Q ss_pred EEEEcCChhhHHHHHHHHhCCCEEEEEEeCc
Q 017914 62 MLILGMGFVGRIFAEKIKNQGWVVSGTCTNV 92 (364)
Q Consensus 62 vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~ 92 (364)
++|+|+|.-|.-++.+|.+.|.+|.++-+..
T Consensus 5 ~IIVGsG~aG~v~A~rLae~g~~VlvLEaG~ 35 (360)
T d1kdga1 5 YIIVGAGPGGIIAADRLSEAGKKVLLLERGG 35 (360)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCCEEEECSSC
T ss_pred EEEECcCHHHHHHHHHHhhCCCeEEEEEccC
Confidence 7899999999999999999999999998864
|
| >d1s6ya1 c.2.1.5 (A:4-172) 6-phospho-beta-glucosidase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: 6-phospho-beta-glucosidase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=81.60 E-value=1.4 Score=32.65 Aligned_cols=70 Identities=11% Similarity=-0.021 Sum_probs=39.5
Q ss_pred CCeEEEEcCChhh--HHHHHHHHhCC----CEEEEEEeCchh--hhhhh--------hCCceEEEccCChhhHHhhccCc
Q 017914 59 PNRMLILGMGFVG--RIFAEKIKNQG----WVVSGTCTNVMK--KKELE--------QSGFDVHLFNANETALMILTTLK 122 (364)
Q Consensus 59 ~~~vlVtGtG~iG--~~l~~~L~~~g----~~V~~~~r~~~~--~~~l~--------~~~~~~~~~D~~~~~~~~~~~~d 122 (364)
+|||.|+|+|.+| ..++..+.... -++..++.+++. .+.+. ..+........+|.. +.+++.|
T Consensus 1 k~KI~iIGaGs~~~~~~~~~l~~~~~~~~~~eI~L~Di~e~~~~~~~~d~~~~~~~~~~~~~~~~~~~td~~-~al~gaD 79 (169)
T d1s6ya1 1 RLKIATIGGGSSYTPELVEGLIKRYHELPVGELWLVDIPEGKEKLEIVGALAKRMVEKAGVPIEIHLTLDRR-RALDGAD 79 (169)
T ss_dssp CEEEEEETTTCTTHHHHHHHHHHTTTTCCEEEEEEECCGGGHHHHHHHHHHHHHHHHHTTCCCEEEEESCHH-HHHTTCS
T ss_pred CcEEEEECCChhhHHHHHHHHHHhccccCCCEEEEEcCCccHHHHHHHHHHHHHHHHhcCCCceeeecCCch-hhcCCCC
Confidence 3789999876544 44554444432 388888887643 22111 123333333333333 5678888
Q ss_pred eeeEEEE
Q 017914 123 NYTHLLV 129 (364)
Q Consensus 123 ~v~~~~~ 129 (364)
.|+..++
T Consensus 80 vVv~ta~ 86 (169)
T d1s6ya1 80 FVTTQFR 86 (169)
T ss_dssp EEEECCC
T ss_pred EEEEccc
Confidence 8888774
|
| >d1dl5a1 c.66.1.7 (A:1-213) Protein-L-isoaspartyl O-methyltransferase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Protein-L-isoaspartyl O-methyltransferase domain: Protein-L-isoaspartyl O-methyltransferase species: Thermotoga maritima [TaxId: 2336]
Probab=81.45 E-value=1.8 Score=33.39 Aligned_cols=71 Identities=7% Similarity=-0.036 Sum_probs=44.6
Q ss_pred CCCCCeEEEEc--CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhh-------hCCceEEEccCChhhHHhhccCceeeE
Q 017914 56 WQSPNRMLILG--MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELE-------QSGFDVHLFNANETALMILTTLKNYTH 126 (364)
Q Consensus 56 ~~~~~~vlVtG--tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~-------~~~~~~~~~D~~~~~~~~~~~~d~v~~ 126 (364)
...+++||-+| +|+....+++.+.. +..|++++.++....... -.++.++.+|..+.. .....+|.|+.
T Consensus 73 l~~g~~VLdiG~GtG~~s~~la~~~~~-~g~V~~id~~~~~~~~a~~~~~~~~~~n~~~~~~d~~~~~-~~~~~fD~I~~ 150 (213)
T d1dl5a1 73 LDKGMRVLEIGGGTGYNAAVMSRVVGE-KGLVVSVEYSRKICEIAKRNVERLGIENVIFVCGDGYYGV-PEFSPYDVIFV 150 (213)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHCT-TCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCC-GGGCCEEEEEE
T ss_pred ccccceEEEecCccchhHHHHHHHhCC-CCcEEEeecchhhHHHhhhhHhhhcccccccccCchHHcc-ccccchhhhhh
Confidence 35578999997 57766666654444 458999998875443321 146677778766522 22345787765
Q ss_pred EE
Q 017914 127 LL 128 (364)
Q Consensus 127 ~~ 128 (364)
.+
T Consensus 151 ~~ 152 (213)
T d1dl5a1 151 TV 152 (213)
T ss_dssp CS
T ss_pred hc
Confidence 44
|
| >d1kpga_ c.66.1.18 (A:) CmaA1 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Mycolic acid cyclopropane synthase domain: CmaA1 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=81.21 E-value=1.2 Score=36.10 Aligned_cols=92 Identities=14% Similarity=0.090 Sum_probs=53.1
Q ss_pred CCCCCeEEEEcCChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhh--------CCceEEEccCChhhHHhhccCceeeEE
Q 017914 56 WQSPNRMLILGMGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQ--------SGFDVHLFNANETALMILTTLKNYTHL 127 (364)
Q Consensus 56 ~~~~~~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~--------~~~~~~~~D~~~~~~~~~~~~d~v~~~ 127 (364)
...+.+||=+|+|. |........+.|.+|++++.++...+...+ ..+++..+|..+.+ ..+|.|+-+
T Consensus 60 l~~G~~VLDiGCG~-G~~a~~~a~~~g~~v~git~s~~Q~~~a~~~~~~~g~~~~v~~~~~d~~~~~----~~fD~i~si 134 (285)
T d1kpga_ 60 LQPGMTLLDVGCGW-GATMMRAVEKYDVNVVGLTLSKNQANHVQQLVANSENLRSKRVLLAGWEQFD----EPVDRIVSI 134 (285)
T ss_dssp CCTTCEEEEETCTT-SHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTCCCCSCEEEEESCGGGCC----CCCSEEEEE
T ss_pred CCCCCEEEEecCcc-hHHHHHHHhcCCcceEEEeccHHHHHHHHHHHHhhhhhhhhHHHHhhhhccc----ccccceeee
Confidence 45678999999765 433333344458999999998876543221 45667777765432 345666554
Q ss_pred EEecCCCCCCC-ChhhhHHHHHHHHhhcCC
Q 017914 128 LVSIPPLEGTG-DPMLKHGELLRSTLMNGH 156 (364)
Q Consensus 128 ~~~~~~~~~~~-~~~~~~~~~l~~a~~~~~ 156 (364)
-..-+ .. .......+.+...++..|
T Consensus 135 ~~~eh----~~~~~~~~~~~~~~r~LkpgG 160 (285)
T d1kpga_ 135 GAFEH----FGHERYDAFFSLAHRLLPADG 160 (285)
T ss_dssp SCGGG----TCTTTHHHHHHHHHHHSCTTC
T ss_pred hhhhh----cCchhHHHHHHHHHhhcCCCC
Confidence 33211 11 222344455666665555
|
| >d1uwva2 c.66.1.40 (A:75-432) rRNA (Uracil-5-)-methyltransferase RumA, catalytic domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: (Uracil-5-)-methyltransferase domain: rRNA (Uracil-5-)-methyltransferase RumA, catalytic domain species: Escherichia coli [TaxId: 562]
Probab=80.97 E-value=1.7 Score=36.42 Aligned_cols=91 Identities=18% Similarity=0.093 Sum_probs=53.5
Q ss_pred CCeEEEE--cCChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhh-------CCceEEEccCChhhH---HhhccCceeeE
Q 017914 59 PNRMLIL--GMGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQ-------SGFDVHLFNANETAL---MILTTLKNYTH 126 (364)
Q Consensus 59 ~~~vlVt--GtG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~-------~~~~~~~~D~~~~~~---~~~~~~d~v~~ 126 (364)
..+|+=. |+|.+|-.|+ +++.+|+++..+++....... .+++++.+|..+.-. .....+|.|+-
T Consensus 213 ~~~vlDLycG~G~fsl~La----~~~~~V~gvE~~~~ai~~A~~na~~n~i~n~~~~~~~~~~~~~~~~~~~~~~d~vil 288 (358)
T d1uwva2 213 EDRVLDLFCGMGNFTLPLA----TQAASVVGVEGVPALVEKGQQNARLNGLQNVTFYHENLEEDVTKQPWAKNGFDKVLL 288 (358)
T ss_dssp TCEEEEESCTTTTTHHHHH----TTSSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCTTSCCSSSGGGTTCCSEEEE
T ss_pred CceEEEecccccccchhcc----ccccEEEeccCcHHHHHHHHHhHHhcccccceeeecchhhhhhhhhhhhccCceEEe
Confidence 3566666 5899987664 467899999987665443221 467888888876321 22344565432
Q ss_pred EEEecCCCCCCCChhhhHHHHHHHHhhcCCccEEEEEcc
Q 017914 127 LLVSIPPLEGTGDPMLKHGELLRSTLMNGHLQWLGYLSS 165 (364)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~r~v~~Ss 165 (364)
.+. ...... ++..+.+.+.+++||+|.
T Consensus 289 -----DPP------R~G~~~-~~~~l~~~~~~~ivYVSC 315 (358)
T d1uwva2 289 -----DPA------RAGAAG-VMQQIIKLEPIRIVYVSC 315 (358)
T ss_dssp -----CCC------TTCCHH-HHHHHHHHCCSEEEEEES
T ss_pred -----CCC------CccHHH-HHHHHHHcCCCEEEEEeC
Confidence 111 111122 333444446889999995
|
| >d1mvoa_ c.23.1.1 (A:) PhoP receiver domain {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Flavodoxin-like superfamily: CheY-like family: CheY-related domain: PhoP receiver domain species: Bacillus subtilis [TaxId: 1423]
Probab=80.96 E-value=1.1 Score=30.97 Aligned_cols=54 Identities=11% Similarity=0.170 Sum_probs=37.4
Q ss_pred CCCeEEEEc-CChhhHHHHHHHHhCCCEEEEEEeCchhhhhhhhCCceEEEccCC
Q 017914 58 SPNRMLILG-MGFVGRIFAEKIKNQGWVVSGTCTNVMKKKELEQSGFDVHLFNAN 111 (364)
Q Consensus 58 ~~~~vlVtG-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~ 111 (364)
|++||||+= .-.+-..+...|.+.||+|.......+-...+.+....++..|+.
T Consensus 1 M~krILiVDDd~~~~~~l~~~L~~~g~~v~~a~~~~~al~~l~~~~~dlillD~~ 55 (121)
T d1mvoa_ 1 MNKKILVVDDEESIVTLLQYNLERSGYDVITASDGEEALKKAETEKPDLIVLDVM 55 (121)
T ss_dssp CCCEEEEECSCHHHHHHHHHHHHHTTCEEEEESSHHHHHHHHHHHCCSEEEEESS
T ss_pred CCCCEEEEECCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHhcccccEEEeccc
Confidence 357899996 888889999999999999997766544444443334444444444
|
| >d1v59a1 c.3.1.5 (A:1-160,A:283-355) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=80.15 E-value=0.85 Score=35.36 Aligned_cols=32 Identities=22% Similarity=0.246 Sum_probs=29.2
Q ss_pred eEEEEcCChhhHHHHHHHHhCCCEEEEEEeCc
Q 017914 61 RMLILGMGFVGRIFAEKIKNQGWVVSGTCTNV 92 (364)
Q Consensus 61 ~vlVtGtG~iG~~l~~~L~~~g~~V~~~~r~~ 92 (364)
-|+|+|+|..|-..+.++.+.|.+|.++.+..
T Consensus 7 DviVIG~GpAGl~aA~~aa~~G~kV~lie~~~ 38 (233)
T d1v59a1 7 DVVIIGGGPAGYVAAIKAAQLGFNTACVEKRG 38 (233)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred CEEEECCCHHHHHHHHHHHHCCCcEEEEEecC
Confidence 48999999999999999999999999998753
|