Citrus Sinensis ID: 017916

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360----
Protein Sequence
MGKGGMSQGEKEDGEEVNMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL
Secondary Structure (PSIPRED)
ccccccccccccccccccEEEEEEEcccEEEEEEcccccccccEEEEEEEEEEEccHHHHccccccccccccccEEccccccEEEEEEcccccccccccEEEEcccccccccHHccccccccccccEEEEccccccccccEEEEccccEEEcccccccccHHHHHHHHHHHHHHHHcccccccEEEEEcccHHHHHHHHHHHHccccEEEEEcccHHHHHHHHHccccEEEEcccccccHHHHHHHHHHHccccccEEEEccccHHHHHHHHHHHccccEEEEEccccccccccHHHHHcccEEEEEEEEccccHHHHHHHHHcccccccccEEEEEcccHHHHHHHHHHHHcccccEEEEEEc
Secondary Structure Prediction (SSPRO)
ccccccccccccEcccccEEEEEEEccEEEEEEcccccccccEEEEEEEEEEEcHHHHHHHHHcEccccEccccEEcccEEEEEEEEEcccccccccccEEEEccEEcccccHHHHcccHHHccccEEccEccEccccEcEEEEEHHHEEEccccccHHHHHcHHHHHHHHHHHHHHccccccEEEEEcccHHHHHHHHHHHHccccEEEEEEccHHHHHHHHHccccEEEEcccccccHHHHHHHHHHHccccccEEEEccccHHHHHHHHHHcccccEEEEcccccccccccHHHHHccccEEEEcccccccHHHHHHHHHccccccHHHEEEEEEHHHHHHHHHHHHHHcccccEEEEEEc
Coil and Loop (DISEMBL)
mgkggmsqgekedgeEVNMAAWLLGVntlkiqpfelpslgpydVLVRMKAVGicgsdvhylktlrcadfvvkepmvigHECAGVIEKVgsevktlvpgdrvalepgiscwrcdhckggrynlcpemkffatppvhgslanqvvhpadlcfklpdnvsleegamceplsvglhacrranigpetnvlimgagPIGLVTMLGarafgaprivivdvdDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGtgidvsfdcagfnKTMSTALSATRAGGKVClvgmghhemtvpltpaavreVDVVGVFRYKNTWPLCLELLRsgkidvkplvthrfgfsQKEVEEAFETSARGGTAIKVMFNL
Flexible Loop (DISEMBL)
mgkggmsqgekedGEEVNMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVgsevktlvpgdrvalepgiscwrcdHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAkelgadnivkvSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAfetsarggtaiKVMFNL
Low Complexity Region (SEG)
MGKGGMSQGEKEDGEEVNMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL
Disordered region (IsUnstruct)
*****************NMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQK**********************
Disordered Region (DISOPRED)
********************AWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL
Disordered Region (DISEMBL)
**************EEVNMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL
Disordered Region (DISPRO)
***********EDGEEVNMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MGKGGMSQGEKEDGEEVNMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNxxxxxxxxxxxxxxxxxxxxxMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	364	2.2.26 [Sep-21-2011]
Q1PSI9	366	L-idonate 5-dehydrogenase	no	no	0.997	0.991	0.801	1e-177
Q58D31	356	Sorbitol dehydrogenase OS	yes	no	0.931	0.952	0.494	7e-90
P27867	357	Sorbitol dehydrogenase OS	yes	no	0.934	0.952	0.495	9e-90
Q64442	357	Sorbitol dehydrogenase OS	yes	no	0.934	0.952	0.489	1e-89
Q00796	357	Sorbitol dehydrogenase OS	yes	no	0.931	0.949	0.491	4e-89
Q4R639	357	Sorbitol dehydrogenase OS	N/A	no	0.934	0.952	0.484	1e-88
Q5R5F3	357	Sorbitol dehydrogenase OS	yes	no	0.934	0.952	0.484	3e-88
P07846	354	Sorbitol dehydrogenase OS	N/A	no	0.928	0.954	0.488	5e-88
A1CFY8	358	Probable D-xylulose reduc	N/A	no	0.925	0.941	0.431	6e-74
Q86ZV0	358	D-xylulose reductase A OS	no	no	0.934	0.949	0.426	7e-74

>sp|Q1PSI9|IDND_VITVI L-idonate 5-dehydrogenase OS=Vitis vinifera GN=VIT_16s0100g00290 PE=1 SV=2

 Score =  619 bits (1597), Expect = e-177,   Method: Compositional matrix adjust.
 Identities = 294/367 (80%), Positives = 331/367 (90%), Gaps = 4/367 (1%)

Query: 1   MGKGGMSQGE---KEDGEEVNMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSD 57
           MGKGG S+     KE GEE NMAAWLLG+ TLKIQP+ LPSLGPYDV VR+KAVGICGSD
Sbjct: 1   MGKGGNSEDAVSGKEHGEE-NMAAWLLGIKTLKIQPYILPSLGPYDVKVRIKAVGICGSD 59

Query: 58  VHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKG 117
           VH+ KT+RCA+F+VK+PMVIGHECAG+IE+VGSEVK LV GDRVALEPGISC RC  C+ 
Sbjct: 60  VHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKNLVAGDRVALEPGISCNRCSLCRN 119

Query: 118 GRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRA 177
           G+YNLC EMKFF +PP +GSLANQVVHP++LCFKLPDNVSLEEGAMCEPLSVG+HACRRA
Sbjct: 120 GQYNLCREMKFFGSPPTNGSLANQVVHPSNLCFKLPDNVSLEEGAMCEPLSVGIHACRRA 179

Query: 178 NIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNL 237
           N+GPETNVLIMG+GPIGLVTML ARAFGAPRIV+VDVDD RL++AK+LGAD+I++VSTN+
Sbjct: 180 NVGPETNVLIMGSGPIGLVTMLAARAFGAPRIVLVDVDDQRLAIAKDLGADDIIRVSTNI 239

Query: 238 QDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTP 297
           QD+ EEV KIQ  M TG+DVSFDC GFNKTMSTAL+ATRAGGKVCLVG+   EMTVPLTP
Sbjct: 240 QDLDEEVAKIQSTMVTGVDVSFDCVGFNKTMSTALNATRAGGKVCLVGLAQSEMTVPLTP 299

Query: 298 AAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTA 357
           AA REVD+VG+FRY+NTWPLCLE LRSGKIDVKPL+THRF FSQK+VEEAFETSARGG A
Sbjct: 300 AAAREVDIVGIFRYRNTWPLCLEFLRSGKIDVKPLITHRFTFSQKDVEEAFETSARGGNA 359

Query: 358 IKVMFNL 364
           IKVMFNL
Sbjct: 360 IKVMFNL 366

Involved in the catabolism of ascorbate to tartrate. The enzyme has no activity with NADP(+).
Vitis vinifera (taxid: 29760)
EC: 1EC: .EC: 1EC: .EC: 1EC: .EC: nEC: 8

>sp|Q58D31|DHSO_BOVIN Sorbitol dehydrogenase OS=Bos taurus GN=SORD PE=2 SV=3

 Score =  330 bits (847), Expect = 7e-90,   Method: Compositional matrix adjust.
 Identities = 171/346 (49%), Positives = 238/346 (68%), Gaps = 7/346 (2%)

Query: 18  NMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVI 77
           N++  + G   L+++ + +P  GP +VL++M +VGICGSDVHY +  R  DFVVK+PMV+
Sbjct: 8   NLSLVVHGPGDLRLENYPIPEPGPNEVLLKMHSVGICGSDVHYWQHGRIGDFVVKKPMVL 67

Query: 78  GHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGS 137
           GHE +G + KVGS V+ L PGDRVA+EPG      + CK GRYNL P + F ATPP  G+
Sbjct: 68  GHEASGTVVKVGSLVRHLQPGDRVAIEPGAPRETDEFCKIGRYNLSPTIFFCATPPDDGN 127

Query: 138 LANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVT 197
           L     H A+ C+KLPDNV+ EEGA+ EPLSVG+HACRRA +     VL+ GAGPIGLV+
Sbjct: 128 LCRFYKHNANFCYKLPDNVTFEEGALIEPLSVGIHACRRAGVTLGNKVLVCGAGPIGLVS 187

Query: 198 MLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVST-NLQDIAEEVEKIQKAMGTGID 256
           +L A+A GA ++V+ D+   RLS AKE+GAD I+++S  + Q+IA++VE +   +G+  +
Sbjct: 188 LLAAKAMGAAQVVVTDLSASRLSKAKEVGADFILQISNESPQEIAKKVEGL---LGSKPE 244

Query: 257 VSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKNTWP 316
           V+ +C G   ++   + AT +GG + LVG+G    +VPL  AA REVD+ GVFRY NTWP
Sbjct: 245 VTIECTGVETSIQAGIYATHSGGTLVLVGLGSEMTSVPLVHAATREVDIKGVFRYCNTWP 304

Query: 317 LCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMF 362
           + + +L S  ++VKPLVTHRF    ++  EAFETS + G  +KVM 
Sbjct: 305 MAISMLASKSVNVKPLVTHRFPL--EKALEAFETSKK-GLGLKVMI 347

Converts sorbitol to fructose. Part of the polyol pathway that plays an important role in sperm physiology. May play a role in the sperm motility by providing an energetic source for sperm.

Bos taurus (taxid: 9913)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 4

>sp|P27867|DHSO_RAT Sorbitol dehydrogenase OS=Rattus norvegicus GN=Sord PE=1 SV=4

 Score =  330 bits (846), Expect = 9e-90,   Method: Compositional matrix adjust.
 Identities = 172/347 (49%), Positives = 240/347 (69%), Gaps = 7/347 (2%)

Query: 18  NMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVI 77
           N++  + G   ++++ + +P LGP DVL++M +VGICGSDVHY +  R  DFVVK+PMV+
Sbjct: 9   NLSLVVHGPGDIRLENYPIPELGPNDVLLKMHSVGICGSDVHYWEHGRIGDFVVKKPMVL 68

Query: 78  GHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGS 137
           GHE AG + KVG  VK L PGDRVA+EPG+     + CK GRYNL P + F ATPP  G+
Sbjct: 69  GHEAAGTVTKVGPMVKHLKPGDRVAIEPGVPREIDEFCKIGRYNLTPSIFFCATPPDDGN 128

Query: 138 LANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVT 197
           L     H AD C+KLPD+V+ EEGA+ EPLSVG++ACRR ++     VL+ GAGPIG+VT
Sbjct: 129 LCRFYKHSADFCYKLPDSVTFEEGALIEPLSVGIYACRRGSVSLGNKVLVCGAGPIGIVT 188

Query: 198 MLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNL-QDIAEEVEKIQKAMGTGID 256
           +L A+A GA ++V++D+   RL+ AKE+GAD  ++V+     DIA++VE +   +G+  +
Sbjct: 189 LLVAKAMGASQVVVIDLSASRLAKAKEVGADFTIQVAKETPHDIAKKVESV---LGSKPE 245

Query: 257 VSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKNTWP 316
           V+ +C G   ++ T + AT +GG + +VGMG   + +PL  AAVREVD+ GVFRY NTWP
Sbjct: 246 VTIECTGAESSVQTGIYATHSGGTLVVVGMGPEMINLPLVHAAVREVDIKGVFRYCNTWP 305

Query: 317 LCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFN 363
           + + +L S  ++VKPLVTHRF   +K V EAFET A+ G  +KVM  
Sbjct: 306 MAVSMLASKTLNVKPLVTHRFPL-EKAV-EAFET-AKKGLGLKVMIK 349

Converts sorbitol to fructose. Part of the polyol pathway that plays an important role in sperm physiology. May play a role in the sperm motility by providing an energetic source for sperm.

Rattus norvegicus (taxid: 10116)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 4

>sp|Q64442|DHSO_MOUSE Sorbitol dehydrogenase OS=Mus musculus GN=Sord PE=1 SV=3

 Score =  330 bits (845), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 170/347 (48%), Positives = 239/347 (68%), Gaps = 7/347 (2%)

Query: 18  NMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVI 77
           N++  + G   ++++ + +P LGP DVL++M +VGICGSDVHY +  R  DFVVK+PMV+
Sbjct: 9   NLSLVVHGPGDIRLENYPIPELGPNDVLLKMHSVGICGSDVHYWEHGRIGDFVVKKPMVL 68

Query: 78  GHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGS 137
           GHE AG + KVG  VK L PGDRVA+EPG+     ++CK GRYNL P + F ATPP  G+
Sbjct: 69  GHEAAGTVTKVGELVKHLKPGDRVAIEPGVPREVDEYCKIGRYNLTPTIFFCATPPDDGN 128

Query: 138 LANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVT 197
           L     H AD C+KLPD+V+ EEGA+ EPLSVG++ACRR ++     VL+ GAGP+G+VT
Sbjct: 129 LCRFYKHNADFCYKLPDSVTFEEGALIEPLSVGIYACRRGSVSLGNKVLVCGAGPVGMVT 188

Query: 198 MLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNL-QDIAEEVEKIQKAMGTGID 256
           +L A+A GA ++V+ D+   RL+ AKE+GAD  ++V     Q+IA +VE +   +G+  +
Sbjct: 189 LLVAKAMGAAQVVVTDLSASRLTKAKEVGADFTIQVGKETPQEIASKVESL---LGSKPE 245

Query: 257 VSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKNTWP 316
           V+ +C G   ++ T + AT +GG + +VGMG   + +PL  AA+REVD+ GVFRY NTWP
Sbjct: 246 VTIECTGAESSVQTGIYATHSGGTLVIVGMGAEMVNLPLVHAAIREVDIKGVFRYCNTWP 305

Query: 317 LCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFN 363
           + + +L S  ++VKPLVTHRF   +K V EAFET A+ G  +KVM  
Sbjct: 306 MAISMLASKTLNVKPLVTHRFPL-EKAV-EAFET-AKKGVGLKVMIK 349

Converts sorbitol to fructose. Part of the polyol pathway that plays an important role in sperm physiology. May play a role in the sperm motility by providing an energetic source for sperm.

Mus musculus (taxid: 10090)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 4

>sp|Q00796|DHSO_HUMAN Sorbitol dehydrogenase OS=Homo sapiens GN=SORD PE=1 SV=4

 Score =  328 bits (841), Expect = 4e-89,   Method: Compositional matrix adjust.
 Identities = 170/346 (49%), Positives = 235/346 (67%), Gaps = 7/346 (2%)

Query: 18  NMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVI 77
           N++  + G   L+++ + +P  GP +VL+RM +VGICGSDVHY +  R  +F+VK+PMV+
Sbjct: 9   NLSLVVHGPGDLRLENYPIPEPGPNEVLLRMHSVGICGSDVHYWEYGRIGNFIVKKPMVL 68

Query: 78  GHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGS 137
           GHE +G +EKVGS VK L PGDRVA+EPG      + CK GRYNL P + F ATPP  G+
Sbjct: 69  GHEASGTVEKVGSSVKHLKPGDRVAIEPGAPRENDEFCKMGRYNLSPSIFFCATPPDDGN 128

Query: 138 LANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVT 197
           L     H A  C+KLPDNV+ EEGA+ EPLSVG+HACRR  +     VL+ GAGPIG+VT
Sbjct: 129 LCRFYKHNAAFCYKLPDNVTFEEGALIEPLSVGIHACRRGGVTLGHKVLVCGAGPIGMVT 188

Query: 198 MLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVST-NLQDIAEEVEKIQKAMGTGID 256
           +L A+A GA ++V+ D+   RLS AKE+GAD ++++S  + Q+IA +VE     +G   +
Sbjct: 189 LLVAKAMGAAQVVVTDLSATRLSKAKEIGADLVLQISKESPQEIARKVE---GQLGCKPE 245

Query: 257 VSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKNTWP 316
           V+ +C G   ++   + ATR+GG + LVG+G    TVPL  AA+REVD+ GVFRY NTWP
Sbjct: 246 VTIECTGAEASIQAGIYATRSGGNLVLVGLGSEMTTVPLLHAAIREVDIKGVFRYCNTWP 305

Query: 317 LCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMF 362
           + + +L S  ++VKPLVTHRF    ++  EAFET  + G  +K+M 
Sbjct: 306 VAISMLASKSVNVKPLVTHRFPL--EKALEAFETFKK-GLGLKIML 348

Converts sorbitol to fructose. Part of the polyol pathway that plays an important role in sperm physiology. May play a role in the sperm motility by providing an energetic source for sperm.

Homo sapiens (taxid: 9606)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 4

>sp|Q4R639|DHSO_MACFA Sorbitol dehydrogenase OS=Macaca fascicularis GN=SORD PE=2 SV=3

 Score =  327 bits (837), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 168/347 (48%), Positives = 237/347 (68%), Gaps = 7/347 (2%)

Query: 18  NMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVI 77
           N++  + G   L+++ + +P  GP +VL+RM +VGICGSDVHY +  R  +F+VK+PMV+
Sbjct: 9   NLSLVVHGPGDLRLENYPIPEPGPNEVLLRMHSVGICGSDVHYWEEGRIGNFIVKKPMVL 68

Query: 78  GHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGS 137
           GHE +G +EKVGS VK L PGDRVA+EPG+     + CK GRYNL P + F ATPP  G+
Sbjct: 69  GHEASGTVEKVGSLVKHLKPGDRVAIEPGVPRENDEFCKSGRYNLSPSIFFCATPPDDGN 128

Query: 138 LANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVT 197
           L     H A  C+KLPDNV+ EEGA+ EPLSVG+HACRR  +     VL+ GAGPIG+V+
Sbjct: 129 LCRFYKHNAAFCYKLPDNVTFEEGALIEPLSVGIHACRRGGVTLGHRVLVCGAGPIGVVS 188

Query: 198 MLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVST-NLQDIAEEVEKIQKAMGTGID 256
           +L A+A GA ++V+ D+   RLS AKE+GAD ++++S  + Q+IA +VE +   +G   +
Sbjct: 189 LLVAKAMGAAQVVVTDLSAPRLSKAKEIGADLVLQISKESPQEIAGKVEGL---LGCKPE 245

Query: 257 VSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKNTWP 316
           V+ +C G   ++   + ATR+GG + LVG+G    T+PL  AAVREVD+ GVFRY NTWP
Sbjct: 246 VTIECTGAEASIQAGIYATRSGGTLVLVGLGSEMTTIPLLHAAVREVDIKGVFRYCNTWP 305

Query: 317 LCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFN 363
           + + +L S  +++KPLVTHRF    ++  EAFET  + G  +K+M  
Sbjct: 306 VAISMLASKSVNIKPLVTHRFPL--EKALEAFETFKK-GLGLKIMLK 349

Converts sorbitol to fructose. Part of the polyol pathway that plays an important role in sperm physiology. May play a role in the sperm motility by providing an energetic source for sperm.

Macaca fascicularis (taxid: 9541)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 4

>sp|Q5R5F3|DHSO_PONAB Sorbitol dehydrogenase OS=Pongo abelii GN=SORD PE=2 SV=1

 Score =  325 bits (833), Expect = 3e-88,   Method: Compositional matrix adjust.
 Identities = 168/347 (48%), Positives = 235/347 (67%), Gaps = 7/347 (2%)

Query: 18  NMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVI 77
           N++  + G   L+++ + +P  GP +VL+RM +VGICGSDVHY +  R  +F+VK+PMV+
Sbjct: 9   NLSLVVHGPGDLRLENYPIPEPGPNEVLLRMHSVGICGSDVHYWEDGRIGNFIVKKPMVL 68

Query: 78  GHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGS 137
           GHE +G +EKVGS VK L PGDRVA+EPG      + CK GRYNL P + F ATPP  G+
Sbjct: 69  GHEASGTVEKVGSLVKHLKPGDRVAIEPGAPRENDEFCKIGRYNLSPSIFFCATPPDDGN 128

Query: 138 LANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVT 197
           L     H A  C+KLPDNV+ EEGAM EPLSVG+HACRR  +     VL+ GAGPIG+VT
Sbjct: 129 LCRFYKHNAAFCYKLPDNVTFEEGAMIEPLSVGIHACRRGGVTLGHKVLVCGAGPIGMVT 188

Query: 198 MLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVST-NLQDIAEEVEKIQKAMGTGID 256
           +L A+A GA ++V+ D+   RLS AKE+GAD ++++S  + Q+IA +VE +   +G   +
Sbjct: 189 LLVAKAMGAAQVVVTDLSATRLSKAKEIGADLVLQISKESPQEIARKVEGL---LGCKPE 245

Query: 257 VSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKNTWP 316
           V+ +C G   ++   + AT +GG + LVG+G    T+PL  AA+REVD+ GVFRY NTWP
Sbjct: 246 VTIECTGAGASIQAGIYATHSGGTLVLVGLGSEMTTIPLLHAAIREVDIKGVFRYCNTWP 305

Query: 317 LCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFN 363
           + + +L S  ++VKPL+THRF    ++  EAFET  + G  +K+M  
Sbjct: 306 VAISMLASKSVNVKPLITHRFPL--EKALEAFETFKK-GLGLKIMLK 349

Converts sorbitol to fructose. Part of the polyol pathway that plays an important role in sperm physiology. May play a role in the sperm motility by providing an energetic source for sperm.

Pongo abelii (taxid: 9601)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 4

>sp|P07846|DHSO_SHEEP Sorbitol dehydrogenase OS=Ovis aries GN=SORD PE=1 SV=1

 Score =  324 bits (831), Expect = 5e-88,   Method: Compositional matrix adjust.
 Identities = 169/346 (48%), Positives = 237/346 (68%), Gaps = 8/346 (2%)

Query: 18  NMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVI 77
           N++  + G   L+++ + +P  GP +VL++M +VGICGSDVHY +  R  DFVVK+PMV+
Sbjct: 7   NLSLVVHGPGDLRLENYPIPEPGPNEVLLKMHSVGICGSDVHYWQG-RIGDFVVKKPMVL 65

Query: 78  GHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGS 137
           GHE +G + KVGS V+ L PGDRVA++PG      + CK GRYNL P + F ATPP  G+
Sbjct: 66  GHEASGTVVKVGSLVRHLQPGDRVAIQPGAPRQTDEFCKIGRYNLSPTIFFCATPPDDGN 125

Query: 138 LANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVT 197
           L     H A+ C+KLPDNV+ EEGA+ EPLSVG+HACRRA +     VL+ GAGPIGLV 
Sbjct: 126 LCRFYKHNANFCYKLPDNVTFEEGALIEPLSVGIHACRRAGVTLGNKVLVCGAGPIGLVN 185

Query: 198 MLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVST-NLQDIAEEVEKIQKAMGTGID 256
           +L A+A GA ++V+ D+   RLS AKE+GAD I+++S  + ++IA++VE +   +G+  +
Sbjct: 186 LLAAKAMGAAQVVVTDLSASRLSKAKEVGADFILEISNESPEEIAKKVEGL---LGSKPE 242

Query: 257 VSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKNTWP 316
           V+ +C G   ++   + AT +GG + LVG+G    +VPL  AA REVD+ GVFRY NTWP
Sbjct: 243 VTIECTGVETSIQAGIYATHSGGTLVLVGLGSEMTSVPLVHAATREVDIKGVFRYCNTWP 302

Query: 317 LCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMF 362
           + + +L S  ++VKPLVTHRF    ++  EAFETS + G  +KVM 
Sbjct: 303 MAISMLASKSVNVKPLVTHRFPL--EKALEAFETSKK-GLGLKVMI 345

Converts sorbitol to fructose. Part of the polyol pathway that plays an important role in sperm physiology. May play a role in the sperm motility by providing an energetic source for sperm.

Ovis aries (taxid: 9940)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 4

>sp|A1CFY8|XYL2_ASPCL Probable D-xylulose reductase A OS=Aspergillus clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1) GN=xdhA PE=3 SV=2

 Score =  278 bits (710), Expect = 6e-74,   Method: Compositional matrix adjust.
 Identities = 152/352 (43%), Positives = 216/352 (61%), Gaps = 15/352 (4%)

Query: 18  NMAAWLLGVNTLKIQPFELPSL-GPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMV 76
           N++  L G++ +K +   +P L  P+DV+V +K  GICGSDVHY +      FVVK+PMV
Sbjct: 10  NLSFVLEGIHQVKFEDRPIPELRDPHDVIVNVKYTGICGSDVHYWEHGAIGHFVVKDPMV 69

Query: 77  IGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHG 136
           +GHE +GV+ KVGS V +L  GDRVA+EPG+ C RC+ CK G+YNLC +M F ATPP  G
Sbjct: 70  LGHESSGVVAKVGSAVTSLKVGDRVAMEPGVPCRRCEPCKAGKYNLCEKMAFAATPPYDG 129

Query: 137 SLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLV 196
           +LA     P D C+KLP+N+SL+EGA+ EPL V +H  R+A+I P  +V++ GAGP+GL+
Sbjct: 130 TLAKYYPLPEDFCYKLPENISLQEGALMEPLGVAVHITRQASIKPGESVVVFGAGPVGLL 189

Query: 197 TMLGARAFGAPRIVIVDVDDYRLSVAKELGADNI---VKVS--TNLQDIAEEVEKIQKAM 251
               ARAFGA +I+ VD+   RL  AK+  A  I    KVS   N   + EE +     +
Sbjct: 190 CCAVARAFGASKIIAVDIQKTRLDFAKKYAATAIFEPAKVSAVANADQMREEND-----L 244

Query: 252 GTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY 311
           G G DV  D +G   ++ T +   R GG     GMG +E+  P+  A  +E+ + G FRY
Sbjct: 245 GPGADVVIDASGAEPSVHTGIHVLRPGGTYVQGGMGRNEINFPIMAACTKELTIKGSFRY 304

Query: 312 -KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMF 362
               + L ++L+ SGK++VK L+T    F  +E E+AF+   + G  IK + 
Sbjct: 305 GSGDYKLAVDLVASGKVNVKDLITGVVEF--QEAEQAFK-EVKAGKGIKTLI 353

Xylitol dehydrogenase which catalyzes the conversion of xylitol to D-xylulose. Xylose is a major component of hemicelluloses such as xylan. Most fungi utilize D-xylose via three enzymatic reactions, xylose reductase (XR), xylitol dehydrogenase (XDH), and xylulokinase, to form xylulose 5-phosphate, which enters pentose phosphate pathway.

Aspergillus clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1) (taxid: 344612)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 9

>sp|Q86ZV0|XYL2_ASPOR D-xylulose reductase A OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) GN=xdhA PE=3 SV=2

 Score =  278 bits (710), Expect = 7e-74,   Method: Compositional matrix adjust.
 Identities = 149/349 (42%), Positives = 214/349 (61%), Gaps = 9/349 (2%)

Query: 18  NMAAWLLGVNTLKIQPFELPSL-GPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMV 76
           N++  L G++ +K +   +P L   +DVLV ++  GICGSDVHY +      FVVK+PMV
Sbjct: 10  NLSFVLEGIHKVKFEDRPIPQLRDAHDVLVDVRFTGICGSDVHYWEHGSIGQFVVKDPMV 69

Query: 77  IGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHG 136
           +GHE +GVI KVGS V TL  GD VA+EPGI C RC+ CK G+YNLC +M F ATPP  G
Sbjct: 70  LGHESSGVISKVGSAVTTLKVGDHVAMEPGIPCRRCEPCKEGKYNLCEKMAFAATPPYDG 129

Query: 137 SLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLV 196
           +LA   V P D C+KLP+N++L+E A+ EPLSV +H  ++AN+ P  +V++ GAGP+GL+
Sbjct: 130 TLAKYYVLPEDFCYKLPENINLQEAAVMEPLSVAVHIVKQANVAPGQSVVVFGAGPVGLL 189

Query: 197 TMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKI--QKAMGTG 254
               ARAFG+P+++ VD+   RL  AK+  A  I + S       E  E+I  +  +G G
Sbjct: 190 CCAVARAFGSPKVIAVDIQKGRLEFAKKYAATAIFEPSK--VSALENAERIVNENDLGRG 247

Query: 255 IDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY-KN 313
            D+  D +G   ++ T +   R GG     GMG +E+T P+  A  +E++V G FRY   
Sbjct: 248 ADIVIDASGAEPSVHTGIHVLRPGGTYVQGGMGRNEITFPIMAACTKELNVRGSFRYGSG 307

Query: 314 TWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMF 362
            + L + L+ SGK+ VK L+T    F  ++ E+AF    + G  IK + 
Sbjct: 308 DYKLAVNLVASGKVSVKELITGVVSF--EDAEQAFH-EVKAGKGIKTLI 353

Xylitol dehydrogenase which catalyzes the conversion of xylitol to D-xylulose. Xylose is a major component of hemicelluloses such as xylan. Most fungi utilize D-xylose via three enzymatic reactions, xylose reductase (XR), xylitol dehydrogenase (XDH), and xylulokinase, to form xylulose 5-phosphate, which enters pentose phosphate pathway.

Aspergillus oryzae (strain ATCC 42149 / RIB 40) (taxid: 510516)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 9

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	364
224120122	364	predicted protein [Populus trichocarpa]	1.0	1.0	0.876	0.0
255539581	364	alcohol dehydrogenase, putative [Ricinus	1.0	1.0	0.881	0.0
358345351	362	L-idonate 5-dehydrogenase [Medicago trun	0.994	1.0	0.859	0.0
358248648	364	uncharacterized protein LOC100791559 [Gl	1.0	1.0	0.865	0.0
217072128	362	unknown [Medicago truncatula] gi|3885198	0.994	1.0	0.854	0.0
356559880	364	PREDICTED: L-idonate 5-dehydrogenase-lik	1.0	1.0	0.859	0.0
350538545	355	sorbitol related enzyme [Solanum lycoper	0.975	1.0	0.857	0.0
225469310	365	PREDICTED: L-idonate 5-dehydrogenase [Vi	1.0	0.997	0.865	0.0
15242240	364	L-iditol 2-dehydrogenase [Arabidopsis th	1.0	1.0	0.848	0.0
21553353	364	sorbitol dehydrogenase-like protein [Ara	1.0	1.0	0.846	0.0

>gi|224120122|ref|XP_002318247.1| predicted protein [Populus trichocarpa] gi|222858920|gb|EEE96467.1| predicted protein [Populus trichocarpa]

 Score =  669 bits (1725), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 319/364 (87%), Positives = 343/364 (94%)

Query: 1   MGKGGMSQGEKEDGEEVNMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHY 60
           MGKGGMS GE +DGEE NMAAWLLGVNTLKIQPF+LP LGP+DV VRMKAVGICGSDVHY
Sbjct: 1   MGKGGMSHGETKDGEEENMAAWLLGVNTLKIQPFKLPCLGPHDVRVRMKAVGICGSDVHY 60

Query: 61  LKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRY 120
           LKT++CA FVVKEPMVIGHECAG+IE+VGSE+K+LVPGDRVALEPGISCWRC  CK GRY
Sbjct: 61  LKTMKCAHFVVKEPMVIGHECAGIIEEVGSEIKSLVPGDRVALEPGISCWRCYLCKEGRY 120

Query: 121 NLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIG 180
           NLCP+MKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVG+HACRRANIG
Sbjct: 121 NLCPDMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIG 180

Query: 181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDI 240
           PETNVL+MGAGPIGLVT+L ARAFGAPRIVIVDVDDYRLSVAK+LGAD IVKVSTNLQD+
Sbjct: 181 PETNVLVMGAGPIGLVTLLAARAFGAPRIVIVDVDDYRLSVAKDLGADEIVKVSTNLQDV 240

Query: 241 AEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAV 300
            +EV  I +AMGTG+DV+FDCAGFNKTMSTALSATR GGKVCL+GMGH+EMTVPLTPAA 
Sbjct: 241 DQEVVLIHQAMGTGVDVTFDCAGFNKTMSTALSATRPGGKVCLIGMGHNEMTVPLTPAAA 300

Query: 301 REVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKV 360
           REVDV+GVFRYKNTWPLC+E L SGKIDVKPL+THRFGFSQKEVEEAFETSA G TAIKV
Sbjct: 301 REVDVIGVFRYKNTWPLCIEFLSSGKIDVKPLITHRFGFSQKEVEEAFETSASGSTAIKV 360

Query: 361 MFNL 364
           MFNL
Sbjct: 361 MFNL 364

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255539581|ref|XP_002510855.1| alcohol dehydrogenase, putative [Ricinus communis] gi|223549970|gb|EEF51457.1| alcohol dehydrogenase, putative [Ricinus communis]

 Score =  668 bits (1723), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 321/364 (88%), Positives = 343/364 (94%)

Query: 1   MGKGGMSQGEKEDGEEVNMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHY 60
           MGKGGMS GE +D +E N+AAWLLGVNTLKIQPF+LPSLGP DV VRMKAVGICGSDVHY
Sbjct: 1   MGKGGMSHGENKDVQEENLAAWLLGVNTLKIQPFKLPSLGPNDVRVRMKAVGICGSDVHY 60

Query: 61  LKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRY 120
           LKTLRCA FVV+EPMVIGHECAG+IE VGSEVK LVPGDRVALEPGISCWRCD CK GRY
Sbjct: 61  LKTLRCAHFVVEEPMVIGHECAGIIEGVGSEVKNLVPGDRVALEPGISCWRCDLCKEGRY 120

Query: 121 NLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIG 180
           NLCPEMKFFATPPVHGSLANQVVHPADLCF+LP+NVSLEEGAMCEPLSVG+HACRRANIG
Sbjct: 121 NLCPEMKFFATPPVHGSLANQVVHPADLCFRLPENVSLEEGAMCEPLSVGVHACRRANIG 180

Query: 181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDI 240
           PETNVL+MGAGPIGLVTML ARAFGAPRIVIVDVDDYRLSVAK+LGAD IVKVST++QD+
Sbjct: 181 PETNVLVMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKDLGADAIVKVSTSIQDV 240

Query: 241 AEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAV 300
           A+EV  I KAMGTG+DV+ DCAGFNKTMS+ALSATR+GGKVCLVGMGH+EMTVPLTPAA 
Sbjct: 241 ADEVVLIHKAMGTGVDVTLDCAGFNKTMSSALSATRSGGKVCLVGMGHNEMTVPLTPAAA 300

Query: 301 REVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKV 360
           REVDV+GVFRYKNTWPLCLE LRSGKIDVKPL+THRFGFSQKEVE AFETSARGG AIKV
Sbjct: 301 REVDVIGVFRYKNTWPLCLEFLRSGKIDVKPLITHRFGFSQKEVEAAFETSARGGDAIKV 360

Query: 361 MFNL 364
           MFNL
Sbjct: 361 MFNL 364

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|358345351|ref|XP_003636744.1| L-idonate 5-dehydrogenase [Medicago truncatula] gi|355502679|gb|AES83882.1| L-idonate 5-dehydrogenase [Medicago truncatula]

 Score =  663 bits (1711), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 313/364 (85%), Positives = 344/364 (94%), Gaps = 2/364 (0%)

Query: 1   MGKGGMSQGEKEDGEEVNMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHY 60
           MGKGGMS    +D E+ NMAAWL+G+NTLKIQPF LPSLGP+DV ++MKAVGICGSDVHY
Sbjct: 1   MGKGGMSV--DDDVEQQNMAAWLVGLNTLKIQPFNLPSLGPHDVRIKMKAVGICGSDVHY 58

Query: 61  LKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRY 120
           LKTLRCADF+VKEPMVIGHECAG+IE+VGS+VKTLVPGDRVA+EPGISCWRCDHCK GRY
Sbjct: 59  LKTLRCADFIVKEPMVIGHECAGIIEEVGSQVKTLVPGDRVAIEPGISCWRCDHCKLGRY 118

Query: 121 NLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIG 180
           NLCP+MKFFATPPVHGSLANQ+VHPADLCFKLP+NVSLEEGAMCEPLSVG+HACRRANIG
Sbjct: 119 NLCPDMKFFATPPVHGSLANQIVHPADLCFKLPENVSLEEGAMCEPLSVGVHACRRANIG 178

Query: 181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDI 240
           PETNVLIMGAGPIGLVTML ARAFGAPRIV+VDVDD+RLSVAK LGAD+IVKVSTN+QD+
Sbjct: 179 PETNVLIMGAGPIGLVTMLSARAFGAPRIVVVDVDDHRLSVAKSLGADDIVKVSTNIQDV 238

Query: 241 AEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAV 300
           AEEV++I   +G G+DV+FDCAGFNKTM+TAL+AT+ GGKVCLVGMGH EMTVPLTPAA 
Sbjct: 239 AEEVKQIHNVLGAGVDVTFDCAGFNKTMTTALTATQPGGKVCLVGMGHSEMTVPLTPAAA 298

Query: 301 REVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKV 360
           REVDVVG+FRYKNTWPLCLE LRSGKIDVKPL+THRFGFSQKEVEEAFETSARGG AIKV
Sbjct: 299 REVDVVGIFRYKNTWPLCLEFLRSGKIDVKPLITHRFGFSQKEVEEAFETSARGGNAIKV 358

Query: 361 MFNL 364
           MFNL
Sbjct: 359 MFNL 362

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|358248648|ref|NP_001239661.1| uncharacterized protein LOC100791559 [Glycine max] gi|255638941|gb|ACU19772.1| unknown [Glycine max]

 Score =  662 bits (1708), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 315/364 (86%), Positives = 341/364 (93%)

Query: 1   MGKGGMSQGEKEDGEEVNMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHY 60
           MGKGGMS  E  +G+E NMAAWL+G+N+LKIQPF+LP+LGP+DV VRMKAVGICGSDVHY
Sbjct: 1   MGKGGMSIDEHGEGKEENMAAWLVGINSLKIQPFKLPTLGPHDVRVRMKAVGICGSDVHY 60

Query: 61  LKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRY 120
           LKTLRCA F+VKEPMVIGHECAG+IE+VGS+VK+LVPGDRVA+EPGISCWRCDHCK GRY
Sbjct: 61  LKTLRCAHFIVKEPMVIGHECAGIIEEVGSQVKSLVPGDRVAIEPGISCWRCDHCKQGRY 120

Query: 121 NLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIG 180
           NLC +MKFFATPPVHGSLANQ+VHPADLCFKLPDNVSLEEGAMCEPLSVG+HACRRANIG
Sbjct: 121 NLCDDMKFFATPPVHGSLANQIVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIG 180

Query: 181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDI 240
           PET VLIMGAGPIGLVTML ARAFGAPR VIVDVDDYRLSVAK LGAD+IVKVSTN+QD+
Sbjct: 181 PETYVLIMGAGPIGLVTMLAARAFGAPRTVIVDVDDYRLSVAKSLGADDIVKVSTNIQDV 240

Query: 241 AEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAV 300
           AEEV +IQK MG  IDV+FDCAGF+KTMSTALSAT+ GGKVCLVGMGH EMTVPLTPAA 
Sbjct: 241 AEEVVQIQKVMGADIDVTFDCAGFDKTMSTALSATQPGGKVCLVGMGHSEMTVPLTPAAA 300

Query: 301 REVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKV 360
           REVDV+GVFRY NTWPLCLE LRSGKIDVKPL+THRFGFSQKEVEEAFETSARGG AIKV
Sbjct: 301 REVDVLGVFRYMNTWPLCLEFLRSGKIDVKPLITHRFGFSQKEVEEAFETSARGGNAIKV 360

Query: 361 MFNL 364
           MFNL
Sbjct: 361 MFNL 364

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|217072128|gb|ACJ84424.1| unknown [Medicago truncatula] gi|388519843|gb|AFK47983.1| unknown [Medicago truncatula]

 Score =  659 bits (1701), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 311/364 (85%), Positives = 342/364 (93%), Gaps = 2/364 (0%)

Query: 1   MGKGGMSQGEKEDGEEVNMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHY 60
           MGKGGMS    +D E+ NMAAWL+G+NTLKIQPF LPSLGP+DV ++MKAVGICGSDVHY
Sbjct: 1   MGKGGMSV--DDDVEQQNMAAWLVGLNTLKIQPFNLPSLGPHDVRIKMKAVGICGSDVHY 58

Query: 61  LKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRY 120
           LKTLRCADF+VKEPMVIGHECAG+I + GS+VKTLVPGDRVA+EPGISCWRCDHCK GRY
Sbjct: 59  LKTLRCADFIVKEPMVIGHECAGIIGEAGSQVKTLVPGDRVAIEPGISCWRCDHCKLGRY 118

Query: 121 NLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIG 180
           NLCP+MKFFATPPVHGSLANQ+VHPADLCFKLP+NVSLEEGAMCEPLSVG+HACRRANIG
Sbjct: 119 NLCPDMKFFATPPVHGSLANQIVHPADLCFKLPENVSLEEGAMCEPLSVGVHACRRANIG 178

Query: 181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDI 240
           PETNVLIMGAGPIGLVTML ARAFGAPRIV+VDVDD+RLSVAK LGAD+IVKVSTN+QD+
Sbjct: 179 PETNVLIMGAGPIGLVTMLSARAFGAPRIVVVDVDDHRLSVAKSLGADDIVKVSTNIQDV 238

Query: 241 AEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAV 300
           AEEV++I   +G G+DV+FDCAGFNKTM+TAL+AT+ GGKVCLVGMGH EMTVPLTPAA 
Sbjct: 239 AEEVKQIHNVLGAGVDVTFDCAGFNKTMTTALTATQPGGKVCLVGMGHSEMTVPLTPAAA 298

Query: 301 REVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKV 360
           REVDVVG+FRYKNTWPLCLE LRSGKIDVKPL+THRFGFSQKEVEEAFETSARGG AIKV
Sbjct: 299 REVDVVGIFRYKNTWPLCLEFLRSGKIDVKPLITHRFGFSQKEVEEAFETSARGGNAIKV 358

Query: 361 MFNL 364
           MFNL
Sbjct: 359 MFNL 362

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356559880|ref|XP_003548224.1| PREDICTED: L-idonate 5-dehydrogenase-like [Glycine max]

 Score =  659 bits (1699), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 313/364 (85%), Positives = 342/364 (93%)

Query: 1   MGKGGMSQGEKEDGEEVNMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHY 60
           MGKGGMS  E  +G+E NMAAWL+G+NTLKIQPF+LP+LGP+DV VRMKAVGICGSDVHY
Sbjct: 1   MGKGGMSIDEHGEGKEENMAAWLVGMNTLKIQPFKLPTLGPHDVRVRMKAVGICGSDVHY 60

Query: 61  LKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRY 120
           LKTLRCA F+VKEPMVIGHECAG+IE+VGS+VK+LVPGDRVA+EPGISCW C+HCK GRY
Sbjct: 61  LKTLRCAHFIVKEPMVIGHECAGIIEEVGSQVKSLVPGDRVAIEPGISCWHCNHCKHGRY 120

Query: 121 NLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIG 180
           NLC +MKFFATPPVHGSLANQ+VHPADLCFKLPDNVSLEEGAMCEPLSVG+HACRRANIG
Sbjct: 121 NLCDDMKFFATPPVHGSLANQIVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIG 180

Query: 181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDI 240
           PETNVLIMGAGPIGLVTML ARAFGAP+ VIVDVDD+RLSVAK LGAD+I+KVSTN++D+
Sbjct: 181 PETNVLIMGAGPIGLVTMLAARAFGAPKTVIVDVDDHRLSVAKSLGADDIIKVSTNIKDV 240

Query: 241 AEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAV 300
           AEEV +IQK MG GIDV+FDCAGF+KTMSTALSAT+ GGKVCLVGMGH EMTVPLTPAA 
Sbjct: 241 AEEVVQIQKVMGAGIDVTFDCAGFDKTMSTALSATQPGGKVCLVGMGHSEMTVPLTPAAA 300

Query: 301 REVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKV 360
           REVDVVGVFRY NTWPLCLE LRSGKIDVKPL+THRFGFSQKEVEEAFETSARGG AIKV
Sbjct: 301 REVDVVGVFRYMNTWPLCLEFLRSGKIDVKPLITHRFGFSQKEVEEAFETSARGGNAIKV 360

Query: 361 MFNL 364
           MFNL
Sbjct: 361 MFNL 364

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|350538545|ref|NP_001234092.1| sorbitol related enzyme [Solanum lycopersicum] gi|78183416|dbj|BAE47038.1| sorbitol related enzyme [Solanum lycopersicum]

 Score =  654 bits (1686), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 312/364 (85%), Positives = 337/364 (92%), Gaps = 9/364 (2%)

Query: 1   MGKGGMSQGEKEDGEEVNMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHY 60
           MGKGG  +         NMAAWLLGVNTLKIQPF LP+LGP+DV VRMKAVGICGSDVHY
Sbjct: 1   MGKGGSDE---------NMAAWLLGVNTLKIQPFNLPALGPHDVRVRMKAVGICGSDVHY 51

Query: 61  LKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRY 120
           LKT+RCADFVVKEPMVIGHECAG+IE+VG EVKTLVPGDRVALEPGISCWRC+ CK GRY
Sbjct: 52  LKTMRCADFVVKEPMVIGHECAGIIEEVGGEVKTLVPGDRVALEPGISCWRCNLCKEGRY 111

Query: 121 NLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIG 180
           NLCPEMKFFATPPVHGSLANQVVHPADLCFKLPD++SLEEGAMCEPLSVG+HACRRAN+G
Sbjct: 112 NLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDDISLEEGAMCEPLSVGVHACRRANVG 171

Query: 181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDI 240
           PETN+L++GAGPIGLVT+L ARAFGAPRIVIVDVDDYRLSVAK+LGAD+IVKVS N+QD+
Sbjct: 172 PETNILVLGAGPIGLVTLLAARAFGAPRIVIVDVDDYRLSVAKKLGADDIVKVSINIQDV 231

Query: 241 AEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAV 300
           A ++E IQKAMG GID SFDCAGFNKTMSTAL ATR GGKVCLVGMGHHEMTVPLTPAA 
Sbjct: 232 ATDIENIQKAMGGGIDASFDCAGFNKTMSTALGATRPGGKVCLVGMGHHEMTVPLTPAAA 291

Query: 301 REVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKV 360
           REVDV+G+FRYKNTWPLCLE LRSGKIDVKPL+THRFGFSQ+EVEEAFETSARGG AIKV
Sbjct: 292 REVDVIGIFRYKNTWPLCLEFLRSGKIDVKPLITHRFGFSQEEVEEAFETSARGGDAIKV 351

Query: 361 MFNL 364
           MFNL
Sbjct: 352 MFNL 355

Source: Solanum lycopersicum

Species: Solanum lycopersicum

Genus: Solanum

Family: Solanaceae

Order: Solanales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225469310|ref|XP_002269895.1| PREDICTED: L-idonate 5-dehydrogenase [Vitis vinifera] gi|297741125|emb|CBI31856.3| unnamed protein product [Vitis vinifera]

 Score =  648 bits (1671), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 316/365 (86%), Positives = 338/365 (92%), Gaps = 1/365 (0%)

Query: 1   MGKGGMSQGEKEDGEEV-NMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVH 59
           MGKGGMSQG    GE   NMAAWLLGVN LKIQPF LP LGP+DV VRMKAVGICGSDVH
Sbjct: 1   MGKGGMSQGGDGRGEGEENMAAWLLGVNNLKIQPFILPPLGPHDVRVRMKAVGICGSDVH 60

Query: 60  YLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGR 119
           YLK LRCADF+VKEPMVIGHECAG+I++VG +VK+LVPGDRVALEPGISCWRC  CK GR
Sbjct: 61  YLKKLRCADFIVKEPMVIGHECAGIIDEVGPQVKSLVPGDRVALEPGISCWRCQLCKEGR 120

Query: 120 YNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANI 179
           YNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVG+HACRRA+I
Sbjct: 121 YNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRADI 180

Query: 180 GPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQD 239
           GPE+NVL+MGAGPIGLVTML ARAFGAPRIVIVDVDDYRLSVAK+LGAD IVKVSTN+QD
Sbjct: 181 GPESNVLVMGAGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKDLGADEIVKVSTNIQD 240

Query: 240 IAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAA 299
           +AEEV +I KAMG  +DVSFDCAGF+KTMSTALSAT  GGKVCLVGMGH+EMTVPLTPAA
Sbjct: 241 VAEEVVQIHKAMGARVDVSFDCAGFDKTMSTALSATSTGGKVCLVGMGHNEMTVPLTPAA 300

Query: 300 VREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIK 359
            REVDVVGVFRYKNTWP+C+E LRS KIDVKPL+THRFGFSQ+EVEEAFETSARGGTAIK
Sbjct: 301 AREVDVVGVFRYKNTWPICIEFLRSVKIDVKPLITHRFGFSQREVEEAFETSARGGTAIK 360

Query: 360 VMFNL 364
           VMFNL
Sbjct: 361 VMFNL 365

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15242240|ref|NP_200010.1| L-iditol 2-dehydrogenase [Arabidopsis thaliana] gi|42573658|ref|NP_974925.1| L-iditol 2-dehydrogenase [Arabidopsis thaliana] gi|13877797|gb|AAK43976.1|AF370161_1 putative sorbitol dehydrogenase [Arabidopsis thaliana] gi|10177732|dbj|BAB11045.1| sorbitol dehydrogenase-like protein [Arabidopsis thaliana] gi|22136876|gb|AAM91782.1| putative sorbitol dehydrogenase [Arabidopsis thaliana] gi|110741231|dbj|BAF02166.1| sorbitol dehydrogenase-like protein [Arabidopsis thaliana] gi|332008769|gb|AED96152.1| L-iditol 2-dehydrogenase [Arabidopsis thaliana] gi|332008770|gb|AED96153.1| L-iditol 2-dehydrogenase [Arabidopsis thaliana]

 Score =  646 bits (1666), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 309/364 (84%), Positives = 335/364 (92%)

Query: 1   MGKGGMSQGEKEDGEEVNMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHY 60
           MGKGGMSQGE    EE NMAAWL+G+NTLKIQPF LPS+GP+DV VRMKAVGICGSDVHY
Sbjct: 1   MGKGGMSQGEGSKVEEENMAAWLVGINTLKIQPFLLPSVGPHDVRVRMKAVGICGSDVHY 60

Query: 61  LKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRY 120
           LKT+RCADFVVKEPMVIGHECAG+IE+VG EVK LV GDRVALEPGISCWRC+ C+ GRY
Sbjct: 61  LKTMRCADFVVKEPMVIGHECAGIIEEVGEEVKHLVVGDRVALEPGISCWRCNLCREGRY 120

Query: 121 NLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIG 180
           NLCPEMKFFATPPVHGSLANQVVHPADLCFKLP+NVSLEEGAMCEPLSVG+HACRRA +G
Sbjct: 121 NLCPEMKFFATPPVHGSLANQVVHPADLCFKLPENVSLEEGAMCEPLSVGVHACRRAEVG 180

Query: 181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDI 240
           PETNVL+MGAGPIGLVTML ARAF  PRIVIVDVD+ RL+VAK+LGAD IV+V+TNL+D+
Sbjct: 181 PETNVLVMGAGPIGLVTMLAARAFSVPRIVIVDVDENRLAVAKQLGADEIVQVTTNLEDV 240

Query: 241 AEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAV 300
             EVE+IQKAMG+ IDV+FDCAGFNKTMSTAL+ATR GGKVCLVGMGH  MTVPLTPAA 
Sbjct: 241 GSEVEQIQKAMGSNIDVTFDCAGFNKTMSTALAATRCGGKVCLVGMGHGIMTVPLTPAAA 300

Query: 301 REVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKV 360
           REVDVVGVFRYKNTWPLCLE L SGKIDVKPL+THRFGFSQKEVE+AFETSARG  AIKV
Sbjct: 301 REVDVVGVFRYKNTWPLCLEFLTSGKIDVKPLITHRFGFSQKEVEDAFETSARGSNAIKV 360

Query: 361 MFNL 364
           MFNL
Sbjct: 361 MFNL 364

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|21553353|gb|AAM62446.1| sorbitol dehydrogenase-like protein [Arabidopsis thaliana]

 Score =  645 bits (1663), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 308/364 (84%), Positives = 335/364 (92%)

Query: 1   MGKGGMSQGEKEDGEEVNMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHY 60
           MGKGGMSQGE    EE NMAAWL+G+NTLKIQPF LPS+GP+DV VRMKAVGICGSDVHY
Sbjct: 1   MGKGGMSQGEGSKVEEENMAAWLVGINTLKIQPFLLPSVGPHDVRVRMKAVGICGSDVHY 60

Query: 61  LKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRY 120
           LKT+RCADFVVKEPMVIGHECAG+IE+VG EVK LV GDRVALEPGISCWRC+ C+ GRY
Sbjct: 61  LKTMRCADFVVKEPMVIGHECAGIIEEVGEEVKHLVVGDRVALEPGISCWRCNLCREGRY 120

Query: 121 NLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIG 180
           NLCPEMKFFATPPVHGSLANQVVHPADLCFKLP+NVSLEEGAMCEPLSVG+HACRRA +G
Sbjct: 121 NLCPEMKFFATPPVHGSLANQVVHPADLCFKLPENVSLEEGAMCEPLSVGVHACRRAEVG 180

Query: 181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDI 240
           PETNVL+MGAGPIGLVTML A+AF  PRIVIVDVD+ RL+VAK+LGAD IV+V+TNL+D+
Sbjct: 181 PETNVLVMGAGPIGLVTMLAAQAFSVPRIVIVDVDENRLAVAKQLGADEIVQVTTNLEDV 240

Query: 241 AEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAV 300
             EVE+IQKAMG+ IDV+FDCAGFNKTMSTAL+ATR GGKVCLVGMGH  MTVPLTPAA 
Sbjct: 241 GSEVEQIQKAMGSNIDVTFDCAGFNKTMSTALAATRCGGKVCLVGMGHGIMTVPLTPAAA 300

Query: 301 REVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKV 360
           REVDVVGVFRYKNTWPLCLE L SGKIDVKPL+THRFGFSQKEVE+AFETSARG  AIKV
Sbjct: 301 REVDVVGVFRYKNTWPLCLEFLTSGKIDVKPLITHRFGFSQKEVEDAFETSARGSNAIKV 360

Query: 361 MFNL 364
           MFNL
Sbjct: 361 MFNL 364

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	364
TAIR|locus:2173093	364	AT5G51970 [Arabidopsis thalian	1.0	1.0	0.848	1e-169
FB|FBgn0022359	360	Sodh-2 "Sorbitol dehydrogenase	0.945	0.955	0.522	3.1e-90
FB|FBgn0024289	360	Sodh-1 "Sorbitol dehydrogenase	0.945	0.955	0.517	1.7e-89
WB|WBGene00011003	347	R04B5.5 [Caenorhabditis elegan	0.928	0.974	0.482	2.9e-87
RGD|3734	357	Sord "sorbitol dehydrogenase"	0.928	0.946	0.498	5.4e-86
MGI|MGI:98266	357	Sord "sorbitol dehydrogenase"	0.928	0.946	0.492	1.1e-85
UNIPROTKB|F1PXG0	356	SORD "Uncharacterized protein"	0.928	0.949	0.504	3.8e-85
UNIPROTKB|Q58D31	356	SORD "Sorbitol dehydrogenase"	0.928	0.949	0.498	6.2e-85
UNIPROTKB|Q00796	357	SORD "Sorbitol dehydrogenase"	0.928	0.946	0.495	8e-85
UNIPROTKB|Q4R639	357	SORD "Sorbitol dehydrogenase"	0.928	0.946	0.489	1.3e-84

TAIR|locus:2173093 AT5G51970 [Arabidopsis thaliana (taxid:3702)]

 Score = 1650 (585.9 bits), Expect = 1.0e-169, P = 1.0e-169
 Identities = 309/364 (84%), Positives = 335/364 (92%)

Query:     1 MGKGGMSQGEKEDGEEVNMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHY 60
             MGKGGMSQGE    EE NMAAWL+G+NTLKIQPF LPS+GP+DV VRMKAVGICGSDVHY
Sbjct:     1 MGKGGMSQGEGSKVEEENMAAWLVGINTLKIQPFLLPSVGPHDVRVRMKAVGICGSDVHY 60

Query:    61 LKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRY 120
             LKT+RCADFVVKEPMVIGHECAG+IE+VG EVK LV GDRVALEPGISCWRC+ C+ GRY
Sbjct:    61 LKTMRCADFVVKEPMVIGHECAGIIEEVGEEVKHLVVGDRVALEPGISCWRCNLCREGRY 120

Query:   121 NLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIG 180
             NLCPEMKFFATPPVHGSLANQVVHPADLCFKLP+NVSLEEGAMCEPLSVG+HACRRA +G
Sbjct:   121 NLCPEMKFFATPPVHGSLANQVVHPADLCFKLPENVSLEEGAMCEPLSVGVHACRRAEVG 180

Query:   181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDI 240
             PETNVL+MGAGPIGLVTML ARAF  PRIVIVDVD+ RL+VAK+LGAD IV+V+TNL+D+
Sbjct:   181 PETNVLVMGAGPIGLVTMLAARAFSVPRIVIVDVDENRLAVAKQLGADEIVQVTTNLEDV 240

Query:   241 AEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAV 300
               EVE+IQKAMG+ IDV+FDCAGFNKTMSTAL+ATR GGKVCLVGMGH  MTVPLTPAA 
Sbjct:   241 GSEVEQIQKAMGSNIDVTFDCAGFNKTMSTALAATRCGGKVCLVGMGHGIMTVPLTPAAA 300

Query:   301 REVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKV 360
             REVDVVGVFRYKNTWPLCLE L SGKIDVKPL+THRFGFSQKEVE+AFETSARG  AIKV
Sbjct:   301 REVDVVGVFRYKNTWPLCLEFLTSGKIDVKPLITHRFGFSQKEVEDAFETSARGSNAIKV 360

Query:   361 MFNL 364
             MFNL
Sbjct:   361 MFNL 364

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0005829 "cytosol" evidence=IDA

GO:0009506 "plasmodesma" evidence=IDA

FB|FBgn0022359 Sodh-2 "Sorbitol dehydrogenase-2" [Drosophila melanogaster (taxid:7227)]

 Score = 900 (321.9 bits), Expect = 3.1e-90, P = 3.1e-90
 Identities = 182/348 (52%), Positives = 236/348 (67%)

Query:    18 NMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVI 77
             N+ A L G+  L+++   +P +   +VL+ M +VGICGSDVHYL   R  DFV+ +PM+I
Sbjct:     5 NLTAVLHGIEDLRLEQRPIPEIADDEVLLAMDSVGICGSDVHYLAHGRIGDFVLTKPMII 64

Query:    78 GHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGS 137
             GHE AGV+ K+G +V TL  GDRVA+EPG+ C  CDHCK GRYNLC +M F ATPP  G+
Sbjct:    65 GHEAAGVVAKLGKKVTTLKVGDRVAIEPGVPCRYCDHCKQGRYNLCADMVFCATPPYDGN 124

Query:   138 LANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVT 197
             L     H AD CFKLPD+VS+EEGA+ EPLSVG+HACRRA +G  + VLI+GAGPIGLVT
Sbjct:   125 LTRYYKHAADFCFKLPDHVSMEEGALLEPLSVGVHACRRAGVGLGSKVLILGAGPIGLVT 184

Query:   198 MLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDV 257
             +L A+A GA  I+I D+   RL VAKELGA + + +  + Q   E V+ + + M    D 
Sbjct:   185 LLAAQAMGASEILITDLVQQRLDVAKELGATHTLLLQRD-QSAEETVKVVHQTMSEVPDK 243

Query:   258 SFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKNTWPL 317
             S DC G   +   A+ ATR+GG V +VGMG  E+ +PL  A  RE+D+ GVFRY N +  
Sbjct:   244 SIDCCGAESSARLAIFATRSGGVVVVVGMGAPEVKLPLINALAREIDIRGVFRYCNDYSA 303

Query:   318 CLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARG-GTAIKVMFNL 364
              L L+ SGK++VK LVTH +  +  E  EAFETS RG G AIKVM ++
Sbjct:   304 ALALVASGKVNVKRLVTHHYDIT--ETAEAFETSRRGTGGAIKVMIHV 349

GO:0003939 "L-iditol 2-dehydrogenase activity" evidence=ISS;TAS

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

FB|FBgn0024289 Sodh-1 "Sorbitol dehydrogenase 1" [Drosophila melanogaster (taxid:7227)]

 Score = 893 (319.4 bits), Expect = 1.7e-89, P = 1.7e-89
 Identities = 180/348 (51%), Positives = 236/348 (67%)

Query:    18 NMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVI 77
             N+ A L G+  ++++   +P +   +VL+ M +VGICGSDVHYL   R  DFV+ +PM+I
Sbjct:     5 NLTAVLHGIEDMRLEQRPIPEIADDEVLLAMDSVGICGSDVHYLAHGRIGDFVLTKPMII 64

Query:    78 GHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGS 137
             GHE AGV+ K+G +V TL  GDRVA+EPG+ C +CDHCK G+YNLCP M F ATPP  G+
Sbjct:    65 GHESAGVVAKLGKKVTTLKVGDRVAIEPGVPCRKCDHCKQGKYNLCPGMVFCATPPYDGN 124

Query:   138 LANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVT 197
             L     H AD CFKLPD+V++EEGA+ EPLSVG+HAC+RA +   + VLI+GAGPIGLVT
Sbjct:   125 LTRYYKHAADFCFKLPDHVTMEEGALLEPLSVGVHACKRAEVTLGSKVLILGAGPIGLVT 184

Query:   198 MLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDV 257
             ++ A+A GA  I+I D+   RL VAKELGA + + +  + Q   E    +QK MG   D 
Sbjct:   185 LMAAQAMGASEILITDLVQQRLDVAKELGATHTLLLKRD-QTAEETAVLVQKTMGGQPDK 243

Query:   258 SFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKNTWPL 317
             S DC G   +   A+ ATR+GG V +VGMG  E+ +PL  A  REVD+ GVFRY N +  
Sbjct:   244 SIDCCGAESSARLAIFATRSGGIVVVVGMGAAEIKLPLINALAREVDIRGVFRYCNDYAA 303

Query:   318 CLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARG-GTAIKVMFNL 364
              L L+ SGK++VK LVTH F    KE  +AFETS +G G AIKVM ++
Sbjct:   304 ALALVASGKVNVKRLVTHHFDI--KETAKAFETSRKGLGGAIKVMIHV 349

GO:0003939 "L-iditol 2-dehydrogenase activity" evidence=NAS

GO:0000166 "nucleotide binding" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

WB|WBGene00011003 R04B5.5 [Caenorhabditis elegans (taxid:6239)]

 Score = 872 (312.0 bits), Expect = 2.9e-87, P = 2.9e-87
 Identities = 166/344 (48%), Positives = 238/344 (69%)

Query:    18 NMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVI 77
             N++A L GV+ L+++   +P  GP  VLV++  VGICGSDVHY        FVVKEPM++
Sbjct:     5 NLSAVLYGVDDLRLEQVPIPKPGPNQVLVKVHTVGICGSDVHYWTHGAIGPFVVKEPMIV 64

Query:    78 GHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGS 137
             GHE +G++ +VG+EVK L  GDR+A+EPG+ C  C+HCK GRYNLCPEM+FFATPPVHG+
Sbjct:    65 GHETSGIVSEVGNEVKHLKVGDRIAMEPGLPCKLCEHCKTGRYNLCPEMRFFATPPVHGT 124

Query:   138 LANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVT 197
             L+  VVH AD CFKLPDN+S E+GA+ EPLSV +HACRR N+     VL++GAGPIG++ 
Sbjct:   125 LSRFVVHDADFCFKLPDNLSFEDGALIEPLSVAIHACRRGNVQMGHRVLVLGAGPIGVLN 184

Query:   198 MLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGI-D 256
             ++ A+A GA ++VI D+DD RL++AK+LGAD  + V     D  +   +I  A+G    D
Sbjct:   185 LITAKAVGAGKVVITDLDDGRLALAKKLGADATINVKGKSLDAVKS--EIITALGDQQPD 242

Query:   257 VSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKNTWP 316
             V  +C G   ++ TA++ T++GG + LVG+G   + +P+  +A REVD+ G+FRY N +P
Sbjct:   243 VCIECTGAQPSIETAITTTKSGGVIVLVGLGADRVEIPIIESATREVDMRGIFRYVNCYP 302

Query:   317 LCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKV 360
               +EL+ SGK+++  L   R  +  +E +EAF+ + +    IKV
Sbjct:   303 TAIELISSGKLNLSGLT--RAHYKLEETQEAFKRTQKADV-IKV 343

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0016747 "transferase activity, transferring acyl groups other than amino-acyl groups" evidence=IEA

RGD|3734 Sord "sorbitol dehydrogenase" [Rattus norvegicus (taxid:10116)]

 Score = 860 (307.8 bits), Expect = 5.4e-86, P = 5.4e-86
 Identities = 172/345 (49%), Positives = 240/345 (69%)

Query:    18 NMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVI 77
             N++  + G   ++++ + +P LGP DVL++M +VGICGSDVHY +  R  DFVVK+PMV+
Sbjct:     9 NLSLVVHGPGDIRLENYPIPELGPNDVLLKMHSVGICGSDVHYWEHGRIGDFVVKKPMVL 68

Query:    78 GHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGS 137
             GHE AG + KVG  VK L PGDRVA+EPG+     + CK GRYNL P + F ATPP  G+
Sbjct:    69 GHEAAGTVTKVGPMVKHLKPGDRVAIEPGVPREIDEFCKIGRYNLTPSIFFCATPPDDGN 128

Query:   138 LANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVT 197
             L     H AD C+KLPD+V+ EEGA+ EPLSVG++ACRR ++     VL+ GAGPIG+VT
Sbjct:   129 LCRFYKHSADFCYKLPDSVTFEEGALIEPLSVGIYACRRGSVSLGNKVLVCGAGPIGIVT 188

Query:   198 MLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNL-QDIAEEVEKIQKAMGTGID 256
             +L A+A GA ++V++D+   RL+ AKE+GAD  ++V+     DIA++VE +   +G+  +
Sbjct:   189 LLVAKAMGASQVVVIDLSASRLAKAKEVGADFTIQVAKETPHDIAKKVESV---LGSKPE 245

Query:   257 VSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKNTWP 316
             V+ +C G   ++ T + AT +GG + +VGMG   + +PL  AAVREVD+ GVFRY NTWP
Sbjct:   246 VTIECTGAESSVQTGIYATHSGGTLVVVGMGPEMINLPLVHAAVREVDIKGVFRYCNTWP 305

Query:   317 LCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVM 361
             + + +L S  ++VKPLVTHRF   +K VE AFET A+ G  +KVM
Sbjct:   306 MAVSMLASKTLNVKPLVTHRFPL-EKAVE-AFET-AKKGLGLKVM 347

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003939 "L-iditol 2-dehydrogenase activity" evidence=IEA;ISO

GO:0005575 "cellular_component" evidence=ND

GO:0005739 "mitochondrion" evidence=ISO

GO:0006060 "sorbitol metabolic process" evidence=ISO

GO:0006062 "sorbitol catabolic process" evidence=ISO

GO:0006970 "response to osmotic stress" evidence=IEP

GO:0008270 "zinc ion binding" evidence=ISO;IDA

GO:0009725 "response to hormone stimulus" evidence=IDA

GO:0016020 "membrane" evidence=ISO

GO:0030317 "sperm motility" evidence=ISO;ISS

GO:0031514 "motile cilium" evidence=ISS

GO:0031667 "response to nutrient levels" evidence=IEP

GO:0031966 "mitochondrial membrane" evidence=IEA

GO:0042493 "response to drug" evidence=IEP

GO:0042802 "identical protein binding" evidence=IDA

GO:0046370 "fructose biosynthetic process" evidence=ISO

GO:0046686 "response to cadmium ion" evidence=IDA

GO:0046688 "response to copper ion" evidence=IDA

GO:0051160 "L-xylitol catabolic process" evidence=ISO

GO:0051164 "L-xylitol metabolic process" evidence=ISO

GO:0051287 "NAD binding" evidence=ISO

GO:0055114 "oxidation-reduction process" evidence=ISO

MGI|MGI:98266 Sord "sorbitol dehydrogenase" [Mus musculus (taxid:10090)]

 Score = 857 (306.7 bits), Expect = 1.1e-85, P = 1.1e-85
 Identities = 170/345 (49%), Positives = 239/345 (69%)

Query:    18 NMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVI 77
             N++  + G   ++++ + +P LGP DVL++M +VGICGSDVHY +  R  DFVVK+PMV+
Sbjct:     9 NLSLVVHGPGDIRLENYPIPELGPNDVLLKMHSVGICGSDVHYWEHGRIGDFVVKKPMVL 68

Query:    78 GHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGS 137
             GHE AG + KVG  VK L PGDRVA+EPG+     ++CK GRYNL P + F ATPP  G+
Sbjct:    69 GHEAAGTVTKVGELVKHLKPGDRVAIEPGVPREVDEYCKIGRYNLTPTIFFCATPPDDGN 128

Query:   138 LANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVT 197
             L     H AD C+KLPD+V+ EEGA+ EPLSVG++ACRR ++     VL+ GAGP+G+VT
Sbjct:   129 LCRFYKHNADFCYKLPDSVTFEEGALIEPLSVGIYACRRGSVSLGNKVLVCGAGPVGMVT 188

Query:   198 MLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNL-QDIAEEVEKIQKAMGTGID 256
             +L A+A GA ++V+ D+   RL+ AKE+GAD  ++V     Q+IA +VE +   +G+  +
Sbjct:   189 LLVAKAMGAAQVVVTDLSASRLTKAKEVGADFTIQVGKETPQEIASKVESL---LGSKPE 245

Query:   257 VSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKNTWP 316
             V+ +C G   ++ T + AT +GG + +VGMG   + +PL  AA+REVD+ GVFRY NTWP
Sbjct:   246 VTIECTGAESSVQTGIYATHSGGTLVIVGMGAEMVNLPLVHAAIREVDIKGVFRYCNTWP 305

Query:   317 LCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVM 361
             + + +L S  ++VKPLVTHRF   +K VE AFET A+ G  +KVM
Sbjct:   306 MAISMLASKTLNVKPLVTHRFPL-EKAVE-AFET-AKKGVGLKVM 347

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003939 "L-iditol 2-dehydrogenase activity" evidence=ISO;IDA

GO:0005739 "mitochondrion" evidence=IDA

GO:0005929 "cilium" evidence=IEA

GO:0006060 "sorbitol metabolic process" evidence=IDA

GO:0006062 "sorbitol catabolic process" evidence=ISO

GO:0008270 "zinc ion binding" evidence=ISO

GO:0009725 "response to hormone stimulus" evidence=ISO

GO:0016020 "membrane" evidence=ISO

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0030317 "sperm motility" evidence=IDA

GO:0042802 "identical protein binding" evidence=ISO

GO:0042995 "cell projection" evidence=IEA

GO:0046370 "fructose biosynthetic process" evidence=ISO

GO:0046686 "response to cadmium ion" evidence=ISO

GO:0046688 "response to copper ion" evidence=ISO

GO:0046872 "metal ion binding" evidence=IEA

GO:0051160 "L-xylitol catabolic process" evidence=ISO

GO:0051164 "L-xylitol metabolic process" evidence=ISO

GO:0051287 "NAD binding" evidence=ISO

GO:0055114 "oxidation-reduction process" evidence=ISO;IDA

UNIPROTKB|F1PXG0 SORD "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 852 (305.0 bits), Expect = 3.8e-85, P = 3.8e-85
 Identities = 174/345 (50%), Positives = 236/345 (68%)

Query:    18 NMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVI 77
             N+   + G   L+++ + +P  GP +VL++M +VGICGSDVHY +  R  DF+VK+PMV+
Sbjct:     8 NLTLVVHGPGDLRLENYPIPEPGPNEVLLKMHSVGICGSDVHYWQHGRIGDFIVKKPMVL 67

Query:    78 GHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGS 137
             GHE +G + KVGS VK L  GDRVA+EPG      + CK GRYNL P + F ATPP  G+
Sbjct:    68 GHEASGTVVKVGSLVKHLKSGDRVAIEPGALREMDEFCKIGRYNLSPSIFFCATPPDDGN 127

Query:   138 LANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVT 197
             L     H AD C+KLPDNV+ EEGA+ EPLSVG+HACRRA I     VL+ GAGPIGLVT
Sbjct:   128 LCQFYKHNADFCYKLPDNVTYEEGALIEPLSVGIHACRRAGITLGNKVLVCGAGPIGLVT 187

Query:   198 MLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNL-QDIAEEVEKIQKAMGTGID 256
             ++ A+A GA ++++ D+   RLS AKE+GAD ++++S    ++IA +VE +   +G   +
Sbjct:   188 LIVAKAMGAGQVLVTDLSASRLSKAKEVGADIVLQISKESPKEIASKVEDM---LGCKPE 244

Query:   257 VSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKNTWP 316
              + +C G    + + + ATRAGG + LVG+G    TVPLT A+ REVD+ GVFRY NTWP
Sbjct:   245 ATIECTGVESAIQSGIYATRAGGTLVLVGLGSEMTTVPLTHASTREVDIKGVFRYCNTWP 304

Query:   317 LCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVM 361
             + + +L S  ++VKPLVTHRF   +K +E AFET AR GT +KVM
Sbjct:   305 MAISMLASKAVNVKPLVTHRFPL-EKALE-AFET-ARKGTGLKVM 346

GO:0051287 "NAD binding" evidence=IEA

GO:0051160 "L-xylitol catabolic process" evidence=IEA

GO:0046370 "fructose biosynthetic process" evidence=IEA

GO:0030317 "sperm motility" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0006062 "sorbitol catabolic process" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0003939 "L-iditol 2-dehydrogenase activity" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|Q58D31 SORD "Sorbitol dehydrogenase" [Bos taurus (taxid:9913)]

 Score = 850 (304.3 bits), Expect = 6.2e-85, P = 6.2e-85
 Identities = 172/345 (49%), Positives = 238/345 (68%)

Query:    18 NMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVI 77
             N++  + G   L+++ + +P  GP +VL++M +VGICGSDVHY +  R  DFVVK+PMV+
Sbjct:     8 NLSLVVHGPGDLRLENYPIPEPGPNEVLLKMHSVGICGSDVHYWQHGRIGDFVVKKPMVL 67

Query:    78 GHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGS 137
             GHE +G + KVGS V+ L PGDRVA+EPG      + CK GRYNL P + F ATPP  G+
Sbjct:    68 GHEASGTVVKVGSLVRHLQPGDRVAIEPGAPRETDEFCKIGRYNLSPTIFFCATPPDDGN 127

Query:   138 LANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVT 197
             L     H A+ C+KLPDNV+ EEGA+ EPLSVG+HACRRA +     VL+ GAGPIGLV+
Sbjct:   128 LCRFYKHNANFCYKLPDNVTFEEGALIEPLSVGIHACRRAGVTLGNKVLVCGAGPIGLVS 187

Query:   198 MLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNL-QDIAEEVEKIQKAMGTGID 256
             +L A+A GA ++V+ D+   RLS AKE+GAD I+++S    Q+IA++VE +   +G+  +
Sbjct:   188 LLAAKAMGAAQVVVTDLSASRLSKAKEVGADFILQISNESPQEIAKKVEGL---LGSKPE 244

Query:   257 VSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKNTWP 316
             V+ +C G   ++   + AT +GG + LVG+G    +VPL  AA REVD+ GVFRY NTWP
Sbjct:   245 VTIECTGVETSIQAGIYATHSGGTLVLVGLGSEMTSVPLVHAATREVDIKGVFRYCNTWP 304

Query:   317 LCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVM 361
             + + +L S  ++VKPLVTHRF   +K +E AFETS +G   +KVM
Sbjct:   305 MAISMLASKSVNVKPLVTHRFPL-EKALE-AFETSKKG-LGLKVM 346

GO:0030317 "sperm motility" evidence=ISS

GO:0031514 "motile cilium" evidence=ISS

GO:0031966 "mitochondrial membrane" evidence=IEA

GO:0051287 "NAD binding" evidence=IEA

GO:0051160 "L-xylitol catabolic process" evidence=IEA

GO:0046370 "fructose biosynthetic process" evidence=IEA

GO:0006062 "sorbitol catabolic process" evidence=IEA

GO:0003939 "L-iditol 2-dehydrogenase activity" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|Q00796 SORD "Sorbitol dehydrogenase" [Homo sapiens (taxid:9606)]

 Score = 849 (303.9 bits), Expect = 8.0e-85, P = 8.0e-85
 Identities = 171/345 (49%), Positives = 235/345 (68%)

Query:    18 NMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVI 77
             N++  + G   L+++ + +P  GP +VL+RM +VGICGSDVHY +  R  +F+VK+PMV+
Sbjct:     9 NLSLVVHGPGDLRLENYPIPEPGPNEVLLRMHSVGICGSDVHYWEYGRIGNFIVKKPMVL 68

Query:    78 GHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGS 137
             GHE +G +EKVGS VK L PGDRVA+EPG      + CK GRYNL P + F ATPP  G+
Sbjct:    69 GHEASGTVEKVGSSVKHLKPGDRVAIEPGAPRENDEFCKMGRYNLSPSIFFCATPPDDGN 128

Query:   138 LANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVT 197
             L     H A  C+KLPDNV+ EEGA+ EPLSVG+HACRR  +     VL+ GAGPIG+VT
Sbjct:   129 LCRFYKHNAAFCYKLPDNVTFEEGALIEPLSVGIHACRRGGVTLGHKVLVCGAGPIGMVT 188

Query:   198 MLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNL-QDIAEEVEKIQKAMGTGID 256
             +L A+A GA ++V+ D+   RLS AKE+GAD ++++S    Q+IA +VE     +G   +
Sbjct:   189 LLVAKAMGAAQVVVTDLSATRLSKAKEIGADLVLQISKESPQEIARKVEG---QLGCKPE 245

Query:   257 VSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKNTWP 316
             V+ +C G   ++   + ATR+GG + LVG+G    TVPL  AA+REVD+ GVFRY NTWP
Sbjct:   246 VTIECTGAEASIQAGIYATRSGGNLVLVGLGSEMTTVPLLHAAIREVDIKGVFRYCNTWP 305

Query:   317 LCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVM 361
             + + +L S  ++VKPLVTHRF   +K +E AFET  +G   +K+M
Sbjct:   306 VAISMLASKSVNVKPLVTHRFPL-EKALE-AFETFKKG-LGLKIM 347

GO:0031966 "mitochondrial membrane" evidence=IEA

GO:0003939 "L-iditol 2-dehydrogenase activity" evidence=ISS;IDA

GO:0008270 "zinc ion binding" evidence=ISS;IDA

GO:0006006 "glucose metabolic process" evidence=TAS

GO:0006062 "sorbitol catabolic process" evidence=IDA

GO:0051287 "NAD binding" evidence=IDA

GO:0030246 "carbohydrate binding" evidence=NAS

GO:0016020 "membrane" evidence=IDA

GO:0046370 "fructose biosynthetic process" evidence=IDA

GO:0051160 "L-xylitol catabolic process" evidence=IDA

GO:0051164 "L-xylitol metabolic process" evidence=IDA

GO:0005615 "extracellular space" evidence=TAS

GO:0030317 "sperm motility" evidence=ISS;NAS

GO:0031514 "motile cilium" evidence=ISS

UNIPROTKB|Q4R639 SORD "Sorbitol dehydrogenase" [Macaca fascicularis (taxid:9541)]

 Score = 847 (303.2 bits), Expect = 1.3e-84, P = 1.3e-84
 Identities = 169/345 (48%), Positives = 237/345 (68%)

Query:    18 NMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVI 77
             N++  + G   L+++ + +P  GP +VL+RM +VGICGSDVHY +  R  +F+VK+PMV+
Sbjct:     9 NLSLVVHGPGDLRLENYPIPEPGPNEVLLRMHSVGICGSDVHYWEEGRIGNFIVKKPMVL 68

Query:    78 GHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGS 137
             GHE +G +EKVGS VK L PGDRVA+EPG+     + CK GRYNL P + F ATPP  G+
Sbjct:    69 GHEASGTVEKVGSLVKHLKPGDRVAIEPGVPRENDEFCKSGRYNLSPSIFFCATPPDDGN 128

Query:   138 LANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVT 197
             L     H A  C+KLPDNV+ EEGA+ EPLSVG+HACRR  +     VL+ GAGPIG+V+
Sbjct:   129 LCRFYKHNAAFCYKLPDNVTFEEGALIEPLSVGIHACRRGGVTLGHRVLVCGAGPIGVVS 188

Query:   198 MLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNL-QDIAEEVEKIQKAMGTGID 256
             +L A+A GA ++V+ D+   RLS AKE+GAD ++++S    Q+IA +VE +   +G   +
Sbjct:   189 LLVAKAMGAAQVVVTDLSAPRLSKAKEIGADLVLQISKESPQEIAGKVEGL---LGCKPE 245

Query:   257 VSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKNTWP 316
             V+ +C G   ++   + ATR+GG + LVG+G    T+PL  AAVREVD+ GVFRY NTWP
Sbjct:   246 VTIECTGAEASIQAGIYATRSGGTLVLVGLGSEMTTIPLLHAAVREVDIKGVFRYCNTWP 305

Query:   317 LCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVM 361
             + + +L S  +++KPLVTHRF   +K +E AFET  +G   +K+M
Sbjct:   306 VAISMLASKSVNIKPLVTHRFPL-EKALE-AFETFKKG-LGLKIM 347

GO:0030317 "sperm motility" evidence=ISS

GO:0031514 "motile cilium" evidence=ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
A8GLC6	TDH_SERP5	1, ., 1, ., 1, ., 1, 0, 3	0.3242	0.8681	0.9266	yes	no
Q64442	DHSO_MOUSE	1, ., 1, ., 1, ., 1, 4	0.4899	0.9340	0.9523	yes	no
Q14IB6	TDH_FRAT1	1, ., 1, ., 1, ., 1, 0, 3	0.3169	0.8626	0.8945	yes	no
A2QY54	XYL2_ASPNC	1, ., 1, ., 1, ., 9	0.4147	0.9258	0.9413	yes	no
Q5ARL6	XYL2_EMENI	1, ., 1, ., 1, ., 9	0.4121	0.9395	0.9526	yes	no
P27867	DHSO_RAT	1, ., 1, ., 1, ., 1, 4	0.4956	0.9340	0.9523	yes	no
A1JHX8	TDH_YERE8	1, ., 1, ., 1, ., 1, 0, 3	0.3262	0.8653	0.9237	yes	no
Q92MT4	XYLD_RHIME	1, ., 1, ., 1, ., 9	0.4163	0.8214	0.8641	yes	no
Q58D31	DHSO_BOVIN	1, ., 1, ., 1, ., 1, 4	0.4942	0.9313	0.9522	yes	no
Q07786	DHSO2_YEAST	1, ., 1, ., 1, ., 1, 4	0.3920	0.9478	0.9663	yes	no
Q48AM4	TDH_COLP3	1, ., 1, ., 1, ., 1, 0, 3	0.3222	0.8736	0.9325	yes	no
Q00796	DHSO_HUMAN	1, ., 1, ., 1, ., 1, 4	0.4913	0.9313	0.9495	yes	no
Q0BKV5	TDH_FRATO	1, ., 1, ., 1, ., 1, 0, 3	0.3169	0.8626	0.8945	yes	no
A4IZ92	TDH_FRATW	1, ., 1, ., 1, ., 1, 0, 3	0.3169	0.8626	0.8945	yes	no
Q9RTU4	TDH_DEIRA	1, ., 1, ., 1, ., 1, 0, 3	0.3343	0.8543	0.8936	yes	no
Q5GN51	XYL2_ASPNG	1, ., 1, ., 1, ., 9	0.4147	0.9258	0.9413	yes	no
P36624	DHSO_SCHPO	1, ., 1, ., 1, ., 1, 4	0.4200	0.8543	0.8638	yes	no
Q98D10	XYLD_RHILO	1, ., 1, ., 1, ., 9	0.3883	0.8791	0.9195	yes	no
Q1PSI9	IDND_VITVI	1, ., 1, ., 1, ., n, 8	0.8010	0.9972	0.9918	no	no
A7HEI5	TDH_ANADF	1, ., 1, ., 1, ., 1, 0, 3	0.3243	0.8653	0.9183	yes	no
B0TYR8	TDH_FRAP2	1, ., 1, ., 1, ., 1, 0, 3	0.3230	0.8626	0.8945	yes	no
P35497	DHSO1_YEAST	1, ., 1, ., 1, ., 1, 4	0.3948	0.9478	0.9663	yes	no
P22144	XYL2_PICST	1, ., 1, ., 1, ., 9	0.3489	0.9313	0.9338	yes	no
Q4WAU7	XYL2_ASPFU	1, ., 1, ., 1, ., 9	0.4281	0.9368	0.9525	yes	no
Q06004	DHSO_BACSU	1, ., 1, ., 1, ., 1, 4	0.4184	0.8791	0.9065	yes	no
Q5NGW4	TDH_FRATT	1, ., 1, ., 1, ., 1, 0, 3	0.3169	0.8626	0.8945	yes	no
Q5R5F3	DHSO_PONAB	1, ., 1, ., 1, ., 1, 4	0.4841	0.9340	0.9523	yes	no
Q8U7Y1	XYLD_AGRT5	1, ., 1, ., 1, ., 9	0.3875	0.8516	0.8857	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	1.1.1	0.998
4th Layer	1.1.1.14	LOW CONFIDENCE prediction!
4th Layer	1.1.1.n8	0.994

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Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	estExt_fgenesh4_pg.C_LG_XII1187	L-iditol 2-dehydrogenase (EC-1.1.1.14) (364 aa)
		(Populus trichocarpa)
Predicted Functional Partners:
	estExt_Genewise1_v1.C_LG_XVIII2895	xylose isomerase (EC-5.3.1.5) (477 aa)						•	•		0.919
	gw1.125.171.1	fructokinase (EC-2.7.1.4) (320 aa)	•					•			0.901
	eugene3.00070163	fructokinase (EC-2.7.1.4) (329 aa)	•					•			0.900
	gw1.II.2365.1	fructokinase (EC-2.7.1.4) (337 aa)						•			0.899
	gw1.8434.3.1	annotation not avaliable (125 aa)						•			0.899
	fgenesh4_pm.C_LG_IV000247	fructokinase (EC-2.7.1.4) (351 aa)						•			0.899
	fgenesh4_pm.C_LG_I000617	hexokinase (508 aa)						•			0.899
	fgenesh4_pg.C_LG_VII001238	hexokinase (EC-2.7.1.2) (502 aa)						•			0.899
	fgenesh4_pg.C_LG_IX001086	hexokinase (508 aa)						•			0.899
	eugene3.00151131	SubName- Full=Putative uncharacterized protein; (350 aa)						•			0.899

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	364
PLN02702	364	PLN02702, PLN02702, L-idonate 5-dehydrogenase	0.0
cd05285	343	cd05285, sorbitol_DH, Sorbitol dehydrogenase	0.0
cd08232	339	cd08232, idonate-5-DH, L-idonate 5-dehydrogenase	1e-102
cd08236	343	cd08236, sugar_DH, NAD(P)-dependent sugar dehydrog	1e-93
COG1063	350	COG1063, Tdh, Threonine dehydrogenase and related	5e-93
cd08234	334	cd08234, threonine_DH_like, L-threonine dehydrogen	1e-90
cd08235	343	cd08235, iditol_2_DH_like, L-iditol 2-dehydrogenas	2e-86
cd08233	351	cd08233, butanediol_DH_like, (2R,3R)-2,3-butanedio	8e-83
cd08261	337	cd08261, Zn_ADH7, Alcohol dehydrogenases of the MD	8e-77
cd05188	271	cd05188, MDR, Medium chain reductase/dehydrogenase	2e-70
cd08258	306	cd08258, Zn_ADH4, Alcohol dehydrogenases of the MD	1e-67
cd05278	347	cd05278, FDH_like, Formaldehyde dehydrogenases	4e-65
cd05281	341	cd05281, TDH, Threonine dehydrogenase	6e-65
PRK05396	341	PRK05396, tdh, L-threonine 3-dehydrogenase; Valida	3e-64
cd08239	339	cd08239, THR_DH_like, L-threonine dehydrogenase (T	2e-63
TIGR00692	340	TIGR00692, tdh, L-threonine 3-dehydrogenase	2e-62
cd08254	338	cd08254, hydroxyacyl_CoA_DH, 6-hydroxycyclohex-1-e	6e-62
PRK09880	343	PRK09880, PRK09880, L-idonate 5-dehydrogenase; Pro	8e-60
cd08279	363	cd08279, Zn_ADH_class_III, Class III alcohol dehyd	6e-59
COG1064	339	COG1064, AdhP, Zn-dependent alcohol dehydrogenases	1e-58
cd08285	351	cd08285, NADP_ADH, NADP(H)-dependent alcohol dehyd	9e-57
COG1062	366	COG1062, AdhC, Zn-dependent alcohol dehydrogenases	7e-56
cd05284	340	cd05284, arabinose_DH_like, D-arabinose dehydrogen	1e-55
cd08231	361	cd08231, MDR_TM0436_like, Hypothetical enzyme TM04	6e-54
cd08284	344	cd08284, FDH_like_2, Glutathione-dependent formald	2e-53
cd08256	350	cd08256, Zn_ADH2, Alcohol dehydrogenases of the MD	9e-53
cd08286	345	cd08286, FDH_like_ADH2, formaldehyde dehydrogenase	2e-52
cd08278	365	cd08278, benzyl_alcohol_DH, Benzyl alcohol dehydro	3e-50
cd08262	341	cd08262, Zn_ADH8, Alcohol dehydrogenases of the MD	1e-49
cd08283	386	cd08283, FDH_like_1, Glutathione-dependent formald	2e-48
cd08260	345	cd08260, Zn_ADH6, Alcohol dehydrogenases of the MD	2e-46
cd05279	365	cd05279, Zn_ADH1, Liver alcohol dehydrogenase and	2e-46
cd08263	367	cd08263, Zn_ADH10, Alcohol dehydrogenases of the M	3e-46
cd08259	332	cd08259, Zn_ADH5, Alcohol dehydrogenases of the MD	3e-46
PRK10309	347	PRK10309, PRK10309, galactitol-1-phosphate dehydro	2e-45
cd08265	384	cd08265, Zn_ADH3, Alcohol dehydrogenases of the MD	2e-45
cd08281	371	cd08281, liver_ADH_like1, Zinc-dependent alcohol d	2e-43
cd08240	350	cd08240, 6_hydroxyhexanoate_dh_like, 6-hydroxyhexa	2e-43
cd08242	319	cd08242, MDR_like, Medium chain dehydrogenases/red	8e-43
PRK10083	339	PRK10083, PRK10083, putative oxidoreductase; Provi	1e-42
cd08269	312	cd08269, Zn_ADH9, Alcohol dehydrogenases of the MD	1e-42
cd08245	330	cd08245, CAD, Cinnamyl alcohol dehydrogenases (CAD	9e-42
cd08297	341	cd08297, CAD3, Cinnamyl alcohol dehydrogenases (CA	1e-41
COG0604	326	COG0604, Qor, NADPH:quinone reductase and related	4e-40
cd05283	337	cd05283, CAD1, Cinnamyl alcohol dehydrogenases (CA	1e-39
cd08287	345	cd08287, FDH_like_ADH3, formaldehyde dehydrogenase	1e-38
cd08266	342	cd08266, Zn_ADH_like1, Alcohol dehydrogenases of t	3e-38
pfam08240	108	pfam08240, ADH_N, Alcohol dehydrogenase GroES-like	4e-38
cd08277	365	cd08277, liver_alcohol_DH_like, Liver alcohol dehy	7e-37
cd08255	277	cd08255, 2-desacetyl-2-hydroxyethyl_bacteriochloro	9e-35
cd08282	375	cd08282, PFDH_like, Pseudomonas putida aldehyde-di	1e-34
PRK13771	334	PRK13771, PRK13771, putative alcohol dehydrogenase	3e-32
TIGR03451	358	TIGR03451, mycoS_dep_FDH, S-(hydroxymethyl)mycothi	4e-32
cd05289	309	cd05289, MDR_like_2, alcohol dehydrogenase and qui	3e-30
TIGR03989	369	TIGR03989, Rxyl_3153, oxidoreductase, Rxyl_3153 fa	6e-30
cd08301	369	cd08301, alcohol_DH_plants, Plant alcohol dehydrog	6e-30
cd08299	373	cd08299, alcohol_DH_class_I_II_IV, class I, II, IV	2e-29
cd08298	329	cd08298, CAD2, Cinnamyl alcohol dehydrogenases (CA	5e-28
cd08241	323	cd08241, QOR1, Quinone oxidoreductase (QOR)	3e-27
PRK09422	338	PRK09422, PRK09422, ethanol-active dehydrogenase/a	4e-27
cd05286	320	cd05286, QOR2, Quinone oxidoreductase (QOR)	6e-27
pfam00107	131	pfam00107, ADH_zinc_N, Zinc-binding dehydrogenase	9e-27
TIGR02818	368	TIGR02818, adh_III_F_hyde, S-(hydroxymethyl)glutat	1e-26
cd08276	336	cd08276, MDR7, Medium chain dehydrogenases/reducta	2e-26
cd08249	339	cd08249, enoyl_reductase_like, enoyl_reductase_lik	2e-26
cd08300	368	cd08300, alcohol_DH_class_III, class III alcohol d	4e-26
cd08272	326	cd08272, MDR6, Medium chain dehydrogenases/reducta	5e-26
cd08253	325	cd08253, zeta_crystallin, Zeta-crystallin with NAD	1e-25
cd08268	328	cd08268, MDR2, Medium chain dehydrogenases/reducta	1e-24
PLN02740	381	PLN02740, PLN02740, Alcohol dehydrogenase-like	1e-24
cd08264	325	cd08264, Zn_ADH_like2, Alcohol dehydrogenases of t	3e-24
TIGR03201	349	TIGR03201, dearomat_had, 6-hydroxycyclohex-1-ene-1	1e-23
cd08267	319	cd08267, MDR1, Medium chain dehydrogenases/reducta	1e-22
cd08230	355	cd08230, glucose_DH, Glucose dehydrogenase	7e-22
cd08296	333	cd08296, CAD_like, Cinnamyl alcohol dehydrogenases	2e-21
TIGR02819	393	TIGR02819, fdhA_non_GSH, formaldehyde dehydrogenas	2e-20
cd05276	323	cd05276, p53_inducible_oxidoreductase, PIG3 p53-in	2e-20
PLN02586	360	PLN02586, PLN02586, probable cinnamyl alcohol dehy	3e-20
cd05282	323	cd05282, ETR_like, 2-enoyl thioester reductase-lik	3e-20
PLN02827	378	PLN02827, PLN02827, Alcohol dehydrogenase-like	2e-19
cd05195	293	cd05195, enoyl_red, enoyl reductase of polyketide	1e-18
cd08275	337	cd08275, MDR3, Medium chain dehydrogenases/reducta	1e-17
cd08238	410	cd08238, sorbose_phosphate_red, L-sorbose-1-phosph	2e-17
TIGR02824	325	TIGR02824, quinone_pig3, putative NAD(P)H quinone	1e-16
cd08271	325	cd08271, MDR5, Medium chain dehydrogenases/reducta	5e-16
TIGR03366	280	TIGR03366, HpnZ_proposed, putative phosphonate cat	7e-16
cd08248	350	cd08248, RTN4I1, Human Reticulon 4 Interacting Pro	5e-15
PLN02178	375	PLN02178, PLN02178, cinnamyl-alcohol dehydrogenase	3e-14
PLN02514	357	PLN02514, PLN02514, cinnamyl-alcohol dehydrogenase	2e-13
smart00829	287	smart00829, PKS_ER, Enoylreductase	3e-13
cd08291	324	cd08291, ETR_like_1, 2-enoyl thioester reductase (	6e-13
TIGR02822	329	TIGR02822, adh_fam_2, zinc-binding alcohol dehydro	6e-13
PTZ00354	334	PTZ00354, PTZ00354, alcohol dehydrogenase; Provisi	1e-12
cd08273	331	cd08273, MDR8, Medium chain dehydrogenases/reducta	2e-12
cd08246	393	cd08246, crotonyl_coA_red, crotonyl-CoA reductase	6e-12
cd08237	341	cd08237, ribitol-5-phosphate_DH, ribitol-5-phospha	8e-11
cd08243	320	cd08243, quinone_oxidoreductase_like_1, Quinone ox	3e-10
TIGR01751	398	TIGR01751, crot-CoA-red, crotonyl-CoA reductase	3e-10
cd08244	324	cd08244, MDR_enoyl_red, Possible enoyl reductase	2e-09
cd08290	341	cd08290, ETR, 2-enoyl thioester reductase (ETR)	3e-09
cd08292	324	cd08292, ETR_like_2, 2-enoyl thioester reductase (	5e-09
cd08252	336	cd08252, AL_MDR, Arginate lyase and other MDR fami	8e-09
cd08251	303	cd08251, polyketide_synthase, polyketide synthase	2e-08
PRK10754	327	PRK10754, PRK10754, quinone oxidoreductase, NADPH-	7e-08
pfam13602	129	pfam13602, ADH_zinc_N_2, Zinc-binding dehydrogenas	6e-07
cd08247	352	cd08247, AST1_like, AST1 is a cytoplasmic protein	2e-06
TIGR01202	308	TIGR01202, bchC, 2-desacetyl-2-hydroxyethyl bacter	4e-06
cd08274	350	cd08274, MDR9, Medium chain dehydrogenases/reducta	8e-06
cd08250	329	cd08250, Mgc45594_like, Mgc45594 gene product and	2e-05
cd05280	325	cd05280, MDR_yhdh_yhfp, Yhdh and yhfp-like putativ	7e-04
TIGR02817	336	TIGR02817, adh_fam_1, zinc-binding alcohol dehydro	9e-04
COG2226	238	COG2226, UbiE, Methylase involved in ubiquinone/me	0.001
cd08270	305	cd08270, MDR4, Medium chain dehydrogenases/reducta	0.004

>gnl|CDD|215378 PLN02702, PLN02702, L-idonate 5-dehydrogenase

 Score =  751 bits (1941), Expect = 0.0
 Identities = 322/364 (88%), Positives = 340/364 (93%)

Query: 1   MGKGGMSQGEKEDGEEVNMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHY 60
           MGKGGMS GE    EE NMAAWL+GVNTLKIQPF+LP LGP+DV VRMKAVGICGSDVHY
Sbjct: 1   MGKGGMSSGEGSGVEEENMAAWLVGVNTLKIQPFKLPPLGPHDVRVRMKAVGICGSDVHY 60

Query: 61  LKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRY 120
           LKT+RCADFVVKEPMVIGHECAG+IE+VGSEVK LV GDRVALEPGISCWRC+ CK GRY
Sbjct: 61  LKTMRCADFVVKEPMVIGHECAGIIEEVGSEVKHLVVGDRVALEPGISCWRCNLCKEGRY 120

Query: 121 NLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIG 180
           NLCPEMKFFATPPVHGSLANQVVHPADLCFKLP+NVSLEEGAMCEPLSVG+HACRRANIG
Sbjct: 121 NLCPEMKFFATPPVHGSLANQVVHPADLCFKLPENVSLEEGAMCEPLSVGVHACRRANIG 180

Query: 181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDI 240
           PETNVL+MGAGPIGLVTML ARAFGAPRIVIVDVDD RLSVAK+LGAD IV VSTN++D+
Sbjct: 181 PETNVLVMGAGPIGLVTMLAARAFGAPRIVIVDVDDERLSVAKQLGADEIVLVSTNIEDV 240

Query: 241 AEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAV 300
             EVE+IQKAMG GIDVSFDC GFNKTMSTAL ATRAGGKVCLVGMGH+EMTVPLTPAA 
Sbjct: 241 ESEVEEIQKAMGGGIDVSFDCVGFNKTMSTALEATRAGGKVCLVGMGHNEMTVPLTPAAA 300

Query: 301 REVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKV 360
           REVDVVGVFRY+NTWPLCLE LRSGKIDVKPL+THRFGFSQKEVEEAFETSARGG AIKV
Sbjct: 301 REVDVVGVFRYRNTWPLCLEFLRSGKIDVKPLITHRFGFSQKEVEEAFETSARGGNAIKV 360

Query: 361 MFNL 364
           MFNL
Sbjct: 361 MFNL 364

Length = 364

>gnl|CDD|176188 cd05285, sorbitol_DH, Sorbitol dehydrogenase

 Score =  532 bits (1374), Expect = 0.0
 Identities = 197/346 (56%), Positives = 245/346 (70%), Gaps = 6/346 (1%)

Query: 20  AAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGH 79
           AA L G   L+++   +P  GP +VLVR++AVGICGSDVHY K  R  DFVVKEPMV+GH
Sbjct: 1   AAVLHGPGDLRLEERPIPEPGPGEVLVRVRAVGICGSDVHYYKHGRIGDFVVKEPMVLGH 60

Query: 80  ECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLA 139
           E AG +  VGS V  L  GDRVA+EPG+ C  C+ CK GRYNLCP+M+F ATPPV G+L 
Sbjct: 61  ESAGTVVAVGSGVTHLKVGDRVAIEPGVPCRTCEFCKSGRYNLCPDMRFAATPPVDGTLC 120

Query: 140 NQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTML 199
             V HPAD C KLPDNVSLEEGA+ EPLSVG+HACRRA + P   VL+ GAGPIGL+T  
Sbjct: 121 RYVNHPADFCHKLPDNVSLEEGALVEPLSVGVHACRRAGVRPGDTVLVFGAGPIGLLTAA 180

Query: 200 GARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGT-GIDVS 258
            A+AFGA ++V+ D+D  RL  AKELGA + V V T  +D  E  EKI + +G  G DV 
Sbjct: 181 VAKAFGATKVVVTDIDPSRLEFAKELGATHTVNVRT--EDTPESAEKIAELLGGKGPDVV 238

Query: 259 FDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKNTWPLC 318
            +C G    + TA+ ATR GG V LVGMG  E+T+PL+ A++RE+D+ GVFRY NT+P  
Sbjct: 239 IECTGAESCIQTAIYATRPGGTVVLVGMGKPEVTLPLSAASLREIDIRGVFRYANTYPTA 298

Query: 319 LELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARG-GTAIKVMFN 363
           +ELL SGK+DVKPL+THRF    ++  EAFET+A+G    IKV+  
Sbjct: 299 IELLASGKVDVKPLITHRFPL--EDAVEAFETAAKGKKGVIKVVIE 342

Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Aldose reductase catalyzes the NADP(H)-dependent conversion of glucose to sorbital, and SDH uses NAD(H) in the conversion of sorbitol to fructose. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 343

>gnl|CDD|176194 cd08232, idonate-5-DH, L-idonate 5-dehydrogenase

 Score =  305 bits (784), Expect = e-102
 Identities = 130/341 (38%), Positives = 181/341 (53%), Gaps = 13/341 (3%)

Query: 25  GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGV 84
               L+++    P  GP +V VR+ A GICGSD+HY +        ++EPMV+GHE +GV
Sbjct: 5   AAGDLRVEERPAPEPGPGEVRVRVAAGGICGSDLHYYQHGGFGTVRLREPMVLGHEVSGV 64

Query: 85  IEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFA----TPPVHGSLAN 140
           +E VG  V  L PG RVA+ P   C  CD+C+ GR NLC  M+F       P V G    
Sbjct: 65  VEAVGPGVTGLAPGQRVAVNPSRPCGTCDYCRAGRPNLCLNMRFLGSAMRFPHVQGGFRE 124

Query: 141 QVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLG 200
            +V  A  C  LPD +SL   A+ EPL+V LHA  RA       VL+ GAGPIG + +  
Sbjct: 125 YLVVDASQCVPLPDGLSLRRAALAEPLAVALHAVNRAGDLAGKRVLVTGAGPIGALVVAA 184

Query: 201 ARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD 260
           AR  GA  IV  D+ D  L+VA+ +GAD  V       ++A +      A     DV F+
Sbjct: 185 ARRAGAAEIVATDLADAPLAVARAMGADETV-------NLARDPLAAYAADKGDFDVVFE 237

Query: 261 CAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKNTWPLCLE 320
            +G    +++AL   R GG V  VGM    + +PL     +E+D+ G FR+ + +   + 
Sbjct: 238 ASGAPAALASALRVVRPGGTVVQVGMLGGPVPLPLNALVAKELDLRGSFRFDDEFAEAVR 297

Query: 321 LLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVM 361
           LL +G+IDV+PL+T  F     E  EAF  +A    ++KV 
Sbjct: 298 LLAAGRIDVRPLITAVFPLE--EAAEAFALAADRTRSVKVQ 336

L-idonate 5-dehydrogenase (L-ido 5-DH ) catalyzes the conversion of L-lodonate to 5-ketogluconate in the metabolism of L-Idonate to 6-P-gluconate. In E. coli, this GntII pathway is a subsidiary pathway to the canonical GntI system, which also phosphorylates and transports gluconate. L-ido 5-DH is found in an operon with a regulator indR, transporter idnT, 5-keto-D-gluconate 5-reductase, and Gnt kinase. L-ido 5-DH is a zinc-dependent alcohol dehydrogenase-like protein. The alcohol dehydrogenase ADH-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) which displays a broad range of activities and are distinguished from the smaller short chain dehydrogenases(~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 339

>gnl|CDD|176198 cd08236, sugar_DH, NAD(P)-dependent sugar dehydrogenases

 Score =  282 bits (725), Expect = 1e-93
 Identities = 137/359 (38%), Positives = 198/359 (55%), Gaps = 31/359 (8%)

Query: 19  MAAWLL-GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVH-YLKTLRCADFVVKEPMV 76
           M A +L G   L+ +    P  GP +VLV++KA GICGSD+  YL T          P+V
Sbjct: 1   MKALVLTGPGDLRYEDIPKPEPGPGEVLVKVKACGICGSDIPRYLGT-----GAYHPPLV 55

Query: 77  IGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHG 136
           +GHE +G +E+VGS V  L  GDRVA+ P + C +C++CK G Y+LC    +  +    G
Sbjct: 56  LGHEFSGTVEEVGSGVDDLAVGDRVAVNPLLPCGKCEYCKKGEYSLCSNYDYIGSR-RDG 114

Query: 137 SLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLV 196
           + A  V  PA    K+PD+V  EE AM EP +V LHA R A I     V+++GAG IGL+
Sbjct: 115 AFAEYVSVPARNLIKIPDHVDYEEAAMIEPAAVALHAVRLAGITLGDTVVVIGAGTIGLL 174

Query: 197 TMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAM-GTGI 255
            +   +  GA R++ VD+DD +L+VA+ELGAD+ +          E+VEK+++   G G 
Sbjct: 175 AIQWLKILGAKRVIAVDIDDEKLAVARELGADDTINPKE------EDVEKVRELTEGRGA 228

Query: 256 DVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAV-----REVDVVGVFR 310
           D+  + AG   T+  AL+  R GGKV LVG+ + ++T  L+  A      +E+ + G + 
Sbjct: 229 DLVIEAAGSPATIEQALALARPGGKVVLVGIPYGDVT--LSEEAFEKILRKELTIQGSWN 286

Query: 311 YKNT------WPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTA-IKVMF 362
             +       W   L+LL SGKI V+PL+THR      +   AFE  A       KV+ 
Sbjct: 287 SYSAPFPGDEWRTALDLLASGKIKVEPLITHRLPLE--DGPAAFERLADREEFSGKVLL 343

This group contains proteins identified as sorbitol dehydrogenases and other sugar dehydrogenases of the medium-chain dehydrogenase/reductase family (MDR), which includes zinc-dependent alcohol dehydrogenase and related proteins. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Related proteins include threonine dehydrogenase, formaldehyde dehydrogenase, and butanediol dehydrogenase. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Horse liver alcohol dehydrogenase is a dimeric enzyme and each subunit has two domains. The NAD binding domain is in a Rossmann fold and the catalytic domain contains a zinc ion to which substrates bind. There is a cleft between the domains that closes upon formation of the ternary complex. Length = 343

>gnl|CDD|223991 COG1063, Tdh, Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only]

 Score =  281 bits (721), Expect = 5e-93
 Identities = 122/354 (34%), Positives = 177/354 (50%), Gaps = 18/354 (5%)

Query: 20  AAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGH 79
           A   +G   ++++    P  GP DVL+R+ A GICGSD+H  +      FV    +++GH
Sbjct: 4   AVVYVGGGDVRLEEPPPPIPGPGDVLIRVTATGICGSDLHIYRGGE--PFVPPGDIILGH 61

Query: 80  ECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFAT----PPVH 135
           E  G + +VG  V+    GDRV +EP I C  C +C+ G YNLC    F+        + 
Sbjct: 62  EFVGEVVEVG-VVRGFKVGDRVVVEPNIPCGHCRYCRAGEYNLCENPGFYGYAGLGGGID 120

Query: 136 GSLANQVVHPAD-LCFKLPDNVSLEEGAMCEPLSVGLHAC-RRANIGPETNVLIMGAGPI 193
           G  A  V  PAD    KLPD +  E  A+ EPL+   H    RA + P   V+++GAGPI
Sbjct: 121 GGFAEYVRVPADFNLAKLPDGIDEEAAALTEPLATAYHGHAERAAVRPGGTVVVVGAGPI 180

Query: 194 GLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGT 253
           GL+ +  A+  GA  +++VD    RL +AKE G  ++V    N  +     E ++   G 
Sbjct: 181 GLLAIALAKLLGASVVIVVDRSPERLELAKEAGGADVV---VNPSEDDAGAEILELTGGR 237

Query: 254 GIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAV-REVDVVGVFR-- 310
           G DV  +  G    +  AL A R GG V +VG+   E         V +E+ + G  R  
Sbjct: 238 GADVVIEAVGSPPALDQALEALRPGGTVVVVGVYGGEDIPLPAGLVVSKELTLRGSLRPS 297

Query: 311 YKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFET-SARGGTAIKVMFN 363
            +  +   L+LL SGKID + L+THR      +  EA+E  + R   AIKV+  
Sbjct: 298 GREDFERALDLLASGKIDPEKLITHRLPLD--DAAEAYELFADRKEEAIKVVLK 349

Length = 350

>gnl|CDD|176196 cd08234, threonine_DH_like, L-threonine dehydrogenase

 Score =  274 bits (704), Expect = 1e-90
 Identities = 127/346 (36%), Positives = 186/346 (53%), Gaps = 16/346 (4%)

Query: 20  AAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGH 79
           A    G   L+++   +P  GP +VL+++ A GICG+D+H  +     +F    P+V GH
Sbjct: 3   ALVYEGPGELEVEEVPVPEPGPDEVLIKVAACGICGTDLHIYE----GEFGAAPPLVPGH 58

Query: 80  ECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLA 139
           E AGV+  VGS+V     GDRVA++P I C  C +C+ GR NLC  +        +G  A
Sbjct: 59  EFAGVVVAVGSKVTGFKVGDRVAVDPNIYCGECFYCRRGRPNLCENLTAVGVT-RNGGFA 117

Query: 140 NQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTML 199
             VV PA   +K+PDN+S EE A+ EPLS  +H      I P  +VL+ GAGPIGL+   
Sbjct: 118 EYVVVPAKQVYKIPDNLSFEEAALAEPLSCAVHGLDLLGIKPGDSVLVFGAGPIGLLLAQ 177

Query: 200 GARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF 259
             +  GA R+ + + ++ +L +AK+LGA   V          E+ E  ++    G DV  
Sbjct: 178 LLKLNGASRVTVAEPNEEKLELAKKLGATETV------DPSREDPEAQKEDNPYGFDVVI 231

Query: 260 DCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAV--REVDVVGVFRYKNTWPL 317
           +  G  KT+  A+   R GG V + G+   +  V ++P  +  +E+ ++G F    T+P 
Sbjct: 232 EATGVPKTLEQAIEYARRGGTVLVFGVYAPDARVSISPFEIFQKELTIIGSFINPYTFPR 291

Query: 318 CLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFN 363
            + LL SGKIDVK LV+HR      EV EA E   R G A+KV+  
Sbjct: 292 AIALLESGKIDVKGLVSHRLPLE--EVPEALE-GMRSGGALKVVVV 334

L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine, via NAD(H)-dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Length = 334

>gnl|CDD|176197 cd08235, iditol_2_DH_like, L-iditol 2-dehydrogenase

 Score =  264 bits (676), Expect = 2e-86
 Identities = 134/356 (37%), Positives = 197/356 (55%), Gaps = 31/356 (8%)

Query: 20  AAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGH 79
           AA L G N ++++   +P  GP +VLV+++A GICG+DV   K +R     +K P ++GH
Sbjct: 3   AAVLHGPNDVRLEEVPVPEPGPGEVLVKVRACGICGTDV---KKIRGGHTDLKPPRILGH 59

Query: 80  ECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMK--FFATPPVHGS 137
           E AG I +VG  V     GDRV + P + C  C +C  G  N+CP  K          G 
Sbjct: 60  EIAGEIVEVGDGVTGFKVGDRVFVAPHVPCGECHYCLRGNENMCPNYKKFGNLYD---GG 116

Query: 138 LANQVVHPA-----DLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGP 192
            A  V  PA         KLPDNVS EE A+ EPL+  ++A R+A I P   VL++GAGP
Sbjct: 117 FAEYVRVPAWAVKRGGVLKLPDNVSFEEAALVEPLACCINAQRKAGIKPGDTVLVIGAGP 176

Query: 193 IGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMG 252
           IGL+  + A+A GA ++++ D++++RL  AK+LGAD  +  +   +D+ E+V ++    G
Sbjct: 177 IGLLHAMLAKASGARKVIVSDLNEFRLEFAKKLGADYTIDAAE--EDLVEKVRELTD--G 232

Query: 253 TGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAV--REVDVVGVFR 310
            G DV     G  +  + AL   R GG++   G      TV + P  +  RE+ + G + 
Sbjct: 233 RGADVVIVATGSPEAQAQALELVRKGGRILFFGGLPKGSTVNIDPNLIHYREITITGSYA 292

Query: 311 -----YKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVM 361
                YK      LEL+ SGKIDVK L+THRF    +++EEAFE  A  G ++K++
Sbjct: 293 ASPEDYKEA----LELIASGKIDVKDLITHRFPL--EDIEEAFEL-AADGKSLKIV 341

Putative L-iditol 2-dehydrogenase based on annotation of some members in this subgroup. L-iditol 2-dehydrogenase catalyzes the NAD+-dependent conversion of L-iditol to L-sorbose in fructose and mannose metabolism. This enzyme is related to sorbitol dehydrogenase, alcohol dehydrogenase, and other medium chain dehydrogenase/reductases. The zinc-dependent alcohol dehydrogenase (ADH-Zn)-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) to highlight its broad range of activities and to distinguish from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 343

>gnl|CDD|176195 cd08233, butanediol_DH_like, (2R,3R)-2,3-butanediol dehydrogenase

 Score =  255 bits (654), Expect = 8e-83
 Identities = 130/357 (36%), Positives = 186/357 (52%), Gaps = 27/357 (7%)

Query: 20  AAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVH-YLKTLRCAD---FVVKE-- 73
           AA   G   ++++    P + P +V +++   GICGSD+H YL      D   F+  E  
Sbjct: 3   AARYHGRKDIRVEEVPEPPVKPGEVKIKVAWCGICGSDLHEYL------DGPIFIPTEGH 56

Query: 74  --------PMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPE 125
                   P+ +GHE +GV+ +VGS V     GDRV +EP I C  C  CK G YNLC  
Sbjct: 57  PHLTGETAPVTLGHEFSGVVVEVGSGVTGFKVGDRVVVEPTIKCGTCGACKRGLYNLCDS 116

Query: 126 MKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNV 185
           + F       G  A  VV PA    KLPDNV LEE A+ EPL+V  HA RR+   P    
Sbjct: 117 LGFIGLGGGGGGFAEYVVVPAYHVHKLPDNVPLEEAALVEPLAVAWHAVRRSGFKPGDTA 176

Query: 186 LIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVE 245
           L++GAGPIGL+T+L  +A GA +I++ +  + R  +A+ELGA  ++  +    D+  EV 
Sbjct: 177 LVLGAGPIGLLTILALKAAGASKIIVSEPSEARRELAEELGATIVLDPTE--VDVVAEVR 234

Query: 246 KIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAVREVDV 305
           K+    G G+DVSFDCAG   T+ TA+ A R  G    V +    ++       ++E  +
Sbjct: 235 KLTG--GGGVDVSFDCAGVQATLDTAIDALRPRGTAVNVAIWEKPISFNPNDLVLKEKTL 292

Query: 306 VGVFRY-KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARG-GTAIKV 360
            G   Y +  +   ++LL SGKID +PL+T R       VE+ FE         +K+
Sbjct: 293 TGSICYTREDFEEVIDLLASGKIDAEPLITSRIPLEDI-VEKGFEELINDKEQHVKI 348

(2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Length = 351

>gnl|CDD|176222 cd08261, Zn_ADH7, Alcohol dehydrogenases of the MDR family

 Score =  239 bits (613), Expect = 8e-77
 Identities = 129/340 (37%), Positives = 189/340 (55%), Gaps = 18/340 (5%)

Query: 26  VNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVI 85
              L++     P  G  +VLVR+K VGICGSD+H        +     P ++GHE +G +
Sbjct: 9   PGRLEVVDIPEPVPGAGEVLVRVKRVGICGSDLH---IYHGRNPFASYPRILGHELSGEV 65

Query: 86  EKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVH--GSLANQVV 143
            +VG  V  L  GDRV ++P ISC  C  C+ GR N C  ++      VH  G  A  +V
Sbjct: 66  VEVGEGVAGLKVGDRVVVDPYISCGECYACRKGRPNCCENLQVLG---VHRDGGFAEYIV 122

Query: 144 HPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARA 203
            PAD    +P+ +SL++ A+ EPL++G HA RRA +     VL++GAGPIGL  +  A+A
Sbjct: 123 VPAD-ALLVPEGLSLDQAALVEPLAIGAHAVRRAGVTAGDTVLVVGAGPIGLGVIQVAKA 181

Query: 204 FGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAG 263
            GA R+++VD+DD RL  A+ELGAD+ + V    +D+A  + ++    G G DV  D  G
Sbjct: 182 RGA-RVIVVDIDDERLEFARELGADDTINVGD--EDVAARLREL--TDGEGADVVIDATG 236

Query: 264 FNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKNT-WPLCLELL 322
              +M  A+     GG+V LVG+    +T P      +E+ ++G        +P  ++LL
Sbjct: 237 NPASMEEAVELVAHGGRVVLVGLSKGPVTFPDPEFHKKELTILGSRNATREDFPDVIDLL 296

Query: 323 RSGKIDVKPLVTHRFGFSQKEVEEAFET-SARGGTAIKVM 361
            SGK+D + L+THRF F   +V EAF+   A  G  IKV+
Sbjct: 297 ESGKVDPEALITHRFPFE--DVPEAFDLWEAPPGGVIKVL 334

This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 337

>gnl|CDD|176178 cd05188, MDR, Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score =  221 bits (564), Expect = 2e-70
 Identities = 96/284 (33%), Positives = 147/284 (51%), Gaps = 17/284 (5%)

Query: 43  DVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVA 102
           +VLVR++A G+CG+D+H  +         K P+++GHE AGV+ +VG  V  +  GDRV 
Sbjct: 1   EVLVRVEAAGLCGTDLHIRRGGY--PPPPKLPLILGHEGAGVVVEVGPGVTGVKVGDRVV 58

Query: 103 LEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGA 162
           + P + C  C+ C+                 + G  A  VV PAD    LPD +SLEE A
Sbjct: 59  VLPNLGCGTCELCRE-----LCPGGGILGEGLDGGFAEYVVVPADNLVPLPDGLSLEEAA 113

Query: 163 M-CEPLSVGLHACRRAN-IGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLS 220
           +  EPL+   HA RRA  + P   VL++GAG +GL+    A+A GA R+++ D  D +L 
Sbjct: 114 LLPEPLATAYHALRRAGVLKPGDTVLVLGAGGVGLLAAQLAKAAGA-RVIVTDRSDEKLE 172

Query: 221 VAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGK 280
           +AKELGAD+++             E+++   G G DV  D  G  +T++ AL   R GG+
Sbjct: 173 LAKELGADHVIDYKEED-----LEEELRLTGGGGADVVIDAVGGPETLAQALRLLRPGGR 227

Query: 281 VCLVG-MGHHEMTVPLTPAAVREVDVVGVFRY-KNTWPLCLELL 322
           + +VG          L     +E+ ++G     +  +   L+LL
Sbjct: 228 IVVVGGTSGGPPLDDLRRLLFKELTIIGSTGGTREDFEEALDLL 271

The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Other MDR members have only a catalytic zinc, and some contain no coordinated zinc. Length = 271

>gnl|CDD|176219 cd08258, Zn_ADH4, Alcohol dehydrogenases of the MDR family

 Score =  215 bits (549), Expect = 1e-67
 Identities = 112/303 (36%), Positives = 162/303 (53%), Gaps = 18/303 (5%)

Query: 30  KIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVG 89
           +++    P  GP +VL+++ A GICGSD+H     +     V+ P+V+GHE +G I +VG
Sbjct: 15  ELREVPEPEPGPGEVLIKVAAAGICGSDLH---IYKGDYDPVETPVVLGHEFSGTIVEVG 71

Query: 90  SEVKTLVPGDRVALEP-GISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADL 148
            +V+    GDRV  E    +C RC +C+ G YNLCP  K   T    G  A  V+ P + 
Sbjct: 72  PDVEGWKVGDRVVSETTFSTCGRCPYCRRGDYNLCPHRKGIGTQ-ADGGFAEYVLVPEES 130

Query: 149 CFKLPDNVSLEEGAMCEPLSVGLHAC-RRANIGPETNVLIMGAGPIGLVTMLGARAFGAP 207
             +LP+N+SLE  A+ EPL+V +HA   R+ I P   V++ G GPIGL+    A+  GA 
Sbjct: 131 LHELPENLSLEAAALTEPLAVAVHAVAERSGIRPGDTVVVFGPGPIGLLAAQVAKLQGA- 189

Query: 208 RIVIVDV--DDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFN 265
            +V+V    D+ RL VAKELGAD    V+   +D+AE V +I    G G DV  +C+G  
Sbjct: 190 TVVVVGTEKDEVRLDVAKELGAD---AVNGGEEDLAELVNEITD--GDGADVVIECSGAV 244

Query: 266 KTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAV--REVDVVGVFRYKNT-WPLCLELL 322
             +  AL   R GG++  VG+        +    +  +E+ V+G        W   L LL
Sbjct: 245 PALEQALELLRKGGRIVQVGIFGPLA-ASIDVERIIQKELSVIGSRSSTPASWETALRLL 303

Query: 323 RSG 325
            SG
Sbjct: 304 ASG 306

This group shares the zinc coordination sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 306

>gnl|CDD|176181 cd05278, FDH_like, Formaldehyde dehydrogenases

 Score =  209 bits (535), Expect = 4e-65
 Identities = 116/352 (32%), Positives = 171/352 (48%), Gaps = 22/352 (6%)

Query: 20  AAWLLGVNTLKIQPFELPSL-GPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIG 78
           A   LG   + ++    P + GP+D +VR+ A  ICGSD+H     R      K  M++G
Sbjct: 3   ALVYLGPGKIGLEEVPDPKIQGPHDAIVRVTATSICGSDLH---IYRGGVPGAKHGMILG 59

Query: 79  HECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLC----PEMKFFATPPV 134
           HE  G + +VGS+VK L PGDRV++     C RC  C+ G +  C       K       
Sbjct: 60  HEFVGEVVEVGSDVKRLKPGDRVSVPCITFCGRCRFCRRGYHAHCENGLWGWKLGNRID- 118

Query: 135 HGSLANQVVHP-ADL-CFKLPDNVSLEEGAMC-EPLSVGLHACRRANIGPETNVLIMGAG 191
            G  A  V  P AD+   K+PD +  E+  M  + L  G H    A I P + V ++GAG
Sbjct: 119 -GGQAEYVRVPYADMNLAKIPDGLPDEDALMLSDILPTGFHGAELAGIKPGSTVAVIGAG 177

Query: 192 PIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAM 251
           P+GL  + GAR  GA RI+ VD +  RL +AKE GA +I  ++    DI E++ ++    
Sbjct: 178 PVGLCAVAGARLLGAARIIAVDSNPERLDLAKEAGATDI--INPKNGDIVEQILELTG-- 233

Query: 252 GTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGM-GHHEMTVPLTPAAVREVDV-VGVF 309
           G G+D   +  GF +T   A+   R GG +  VG+ G  +    L     + +    G+ 
Sbjct: 234 GRGVDCVIEAVGFEETFEQAVKVVRPGGTIANVGVYGKPDPLPLLGEWFGKNLTFKTGLV 293

Query: 310 RYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFET-SARGGTAIKV 360
             +   P  L+L+  GKID   L+THRF      + +A+     +    IKV
Sbjct: 294 PVRARMPELLDLIEEGKIDPSKLITHRFPLDD--ILKAYRLFDNKPDGCIKV 343

Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (aka ADH3) may be the ancestral form of alcohol dehydrogenase, which evolved to detoxify formaldehyde. This CD contains glutathione dependant FDH, glutathione independent FDH, and related alcohol dehydrogenases. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 347

>gnl|CDD|176184 cd05281, TDH, Threonine dehydrogenase

 Score =  209 bits (533), Expect = 6e-65
 Identities = 109/341 (31%), Positives = 177/341 (51%), Gaps = 17/341 (4%)

Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
            ++    +P  GP +VL+++ A  ICG+DVH  +    A   +K P++ GHE AG + +V
Sbjct: 13  AELVEVPVPKPGPGEVLIKVLAASICGTDVHIYEWDEWAQSRIKPPLIFGHEFAGEVVEV 72

Query: 89  GSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVH--GSLANQVVHPA 146
           G  V  +  GD V+ E  I C +C  C+ G Y++C   K      V   G  A  VV P 
Sbjct: 73  GEGVTRVKVGDYVSAETHIVCGKCYQCRTGNYHVCQNTKILG---VDTDGCFAEYVVVPE 129

Query: 147 DLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGA 206
           +  +K   ++  E  ++ EPL   +H     ++    +VLI G GPIGL+ +  A+A GA
Sbjct: 130 ENLWKNDKDIPPEIASIQEPLGNAVHTVLAGDV-SGKSVLITGCGPIGLMAIAVAKAAGA 188

Query: 207 PRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNK 266
             ++  D + YRL +AK++GAD ++      +D+  EV+ +    GTG+DV  + +G  K
Sbjct: 189 SLVIASDPNPYRLELAKKMGADVVINPRE--EDVV-EVKSVTD--GTGVDVVLEMSGNPK 243

Query: 267 TMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAV-REVDVVGVFRYK--NTWPLCLELLR 323
            +   L A   GG+V ++G+    + + L    + + + V G+   K   TW     LL+
Sbjct: 244 AIEQGLKALTPGGRVSILGLPPGPVDIDLNNLVIFKGLTVQGITGRKMFETWYQVSALLK 303

Query: 324 SGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL 364
           SGK+D+ P++TH+     ++ EEAFE   R G   KV+   
Sbjct: 304 SGKVDLSPVITHKLPL--EDFEEAFEL-MRSGKCGKVVLYP 341

L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)- dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria) and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Length = 341

>gnl|CDD|180054 PRK05396, tdh, L-threonine 3-dehydrogenase; Validated

 Score =  207 bits (529), Expect = 3e-64
 Identities = 107/331 (32%), Positives = 175/331 (52%), Gaps = 16/331 (4%)

Query: 37  PSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLV 96
           P  GP DVL+++K   ICG+DVH       A   +  PMV+GHE  G + +VGSEV    
Sbjct: 21  PEPGPNDVLIKVKKTAICGTDVHIYNWDEWAQKTIPVPMVVGHEFVGEVVEVGSEVTGFK 80

Query: 97  PGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVH--GSLANQVVHPADLCFKLPD 154
            GDRV+ E  I C  C +C+ GR +LC   K      V+  G+ A  +V PA   +K+PD
Sbjct: 81  VGDRVSGEGHIVCGHCRNCRAGRRHLCRNTKGVG---VNRPGAFAEYLVIPAFNVWKIPD 137

Query: 155 NVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDV 214
           ++  +  A+ +P    +H     ++  E  VLI GAGPIG++    A+  GA  +VI DV
Sbjct: 138 DIPDDLAAIFDPFGNAVHTALSFDLVGED-VLITGAGPIGIMAAAVAKHVGARHVVITDV 196

Query: 215 DDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSA 274
           ++YRL +A+++GA   V V+   +D+ + + ++   M  G DV  + +G        L  
Sbjct: 197 NEYRLELARKMGATRAVNVAK--EDLRDVMAEL--GMTEGFDVGLEMSGAPSAFRQMLDN 252

Query: 275 TRAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYK--NTWPLCLELLRSGKIDVKPL 332
              GG++ ++G+   +M +       + + + G++  +   TW     LL+SG +D+ P+
Sbjct: 253 MNHGGRIAMLGIPPGDMAIDWNKVIFKGLTIKGIYGREMFETWYKMSALLQSG-LDLSPI 311

Query: 333 VTHRFGFSQKEVEEAFETSARGGTAIKVMFN 363
           +THRF     + ++ FE   R G + KV+ +
Sbjct: 312 ITHRFPI--DDFQKGFEA-MRSGQSGKVILD 339

Length = 341

>gnl|CDD|176201 cd08239, THR_DH_like, L-threonine dehydrogenase (TDH)-like

 Score =  205 bits (523), Expect = 2e-63
 Identities = 116/354 (32%), Positives = 178/354 (50%), Gaps = 26/354 (7%)

Query: 20  AAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGH 79
            A   G  T++++ F +P  GP +VL+R+KA G+CGSD+HY            + ++ GH
Sbjct: 3   GAVFPGDRTVELREFPVPVPGPGEVLLRVKASGLCGSDLHYY--YHGHRAPAYQGVIPGH 60

Query: 80  ECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLA 139
           E AGV+  VG  V     GDRV +   + C  C +C+ G   LC   +        G  A
Sbjct: 61  EPAGVVVAVGPGVTHFRVGDRVMVYHYVGCGACRNCRRGWMQLCTSKRAAYGWNRDGGHA 120

Query: 140 NQVVHPADLCFKLPDNVSLEEGAMCEPLSVGL----HACRRANIGPETNVLIMGAGPIGL 195
             ++ P      LPD++S  +GA+   L  G+    HA RR  +     VL++GAGP+GL
Sbjct: 121 EYMLVPEKTLIPLPDDLSFADGAL---LLCGIGTAYHALRRVGVSGRDTVLVVGAGPVGL 177

Query: 196 VTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGI 255
             ++ ARA GA  ++ VD    RL +AK LGAD ++      QD  +E+ ++    G G 
Sbjct: 178 GALMLARALGAEDVIGVDPSPERLELAKALGADFVINS---GQDDVQEIRELTS--GAGA 232

Query: 256 DVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAV---REVDVVGVFRYK 312
           DV+ +C+G       AL A R  G++ LVG G     + +  +     ++  ++G + Y 
Sbjct: 233 DVAIECSGNTAARRLALEAVRPWGRLVLVGEGG---ELTIEVSNDLIRKQRTLIGSW-YF 288

Query: 313 NTWPL--CLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL 364
           +   +  C E L   K++V  LVTHRFG  Q    EA+   A+G +  KV+F  
Sbjct: 289 SVPDMEECAEFLARHKLEVDRLVTHRFGLDQ--APEAYALFAQGES-GKVVFVF 339

MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 339

>gnl|CDD|129775 TIGR00692, tdh, L-threonine 3-dehydrogenase

 Score =  202 bits (515), Expect = 2e-62
 Identities = 115/359 (32%), Positives = 184/359 (51%), Gaps = 27/359 (7%)

Query: 11  KEDGEEVNMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFV 70
           K         A L  V         +P  GP +VL+++ A  ICG+DVH       A   
Sbjct: 4   KTKPGY---GAELTEV--------PVPEPGPGEVLIKVLATSICGTDVHIYNWDEWAQSR 52

Query: 71  VKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFA 130
           +K P V+GHE AG +  +G  V+ +  GD V++E  I C +C  C+ G+Y++C   K F 
Sbjct: 53  IKPPQVVGHEVAGEVVGIGPGVEGIKVGDYVSVETHIVCGKCYACRRGQYHVCQNTKIFG 112

Query: 131 --TPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIM 188
             T    G  A   V PA   +K P ++  E   + EPL   +H      I  ++ VL+ 
Sbjct: 113 VDTD---GCFAEYAVVPAQNIWKNPKSIPPEYATIQEPLGNAVHTVLAGPISGKS-VLVT 168

Query: 189 GAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQ 248
           GAGPIGL+ +  A+A GA  +++ D ++YRL +AK++GA  +V      +D+ +EV  + 
Sbjct: 169 GAGPIGLMAIAVAKASGAYPVIVSDPNEYRLELAKKMGATYVVNPFK--EDVVKEVADL- 225

Query: 249 KAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAV-REVDVVG 307
              G G+DV  + +G  K +   L A   GG+V L+G+   ++T+  T   + + + + G
Sbjct: 226 -TDGEGVDVFLEMSGAPKALEQGLQAVTPGGRVSLLGLPPGKVTIDFTNKVIFKGLTIYG 284

Query: 308 VFRYK--NTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL 364
           +       TW     L++SGK+D+ P++TH+F F   + E+ FE   R G   KV+ +L
Sbjct: 285 ITGRHMFETWYTVSRLIQSGKLDLDPIITHKFKF--DKFEKGFE-LMRSGQTGKVILSL 340

This protein is a tetrameric, zinc-binding, NAD-dependent enzyme of threonine catabolism. Closely related proteins include sorbitol dehydrogenase, xylitol dehydrogenase, and benzyl alcohol dehydrogenase. Eukaryotic examples of this enzyme have been demonstrated experimentally but do not appear in database search results.E. coli His-90 modulates substrate specificity and is believed part of the active site [Energy metabolism, Amino acids and amines]. Length = 340

>gnl|CDD|176216 cd08254, hydroxyacyl_CoA_DH, 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase, N-benzyl-3-pyrrolidinol dehydrogenase, and other MDR family members

 Score =  201 bits (513), Expect = 6e-62
 Identities = 115/352 (32%), Positives = 172/352 (48%), Gaps = 22/352 (6%)

Query: 19  MAAWLL---GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYL-KTLRCADFVVKEP 74
           M AW         L ++   +P  GP +VLV++KA G+C SD+H L   +     + K P
Sbjct: 1   MKAWRFHKGSKGLLVLEEVPVPEPGPGEVLVKVKAAGVCHSDLHILDGGVP---TLTKLP 57

Query: 75  MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPV 134
           + +GHE AG + +VG+ V     GDRVA+   I C  C  C+ GR NLC          +
Sbjct: 58  LTLGHEIAGTVVEVGAGVTNFKVGDRVAVPAVIPCGACALCRRGRGNLCLNQGMPGL-GI 116

Query: 135 HGSLANQVVHPADLCFKLPDNVSLEEGA-MCEPLSVGLHAC-RRANIGPETNVLIMGAGP 192
            G  A  +V PA     +PD V   + A   + +    HA  R   + P   VL++G G 
Sbjct: 117 DGGFAEYIVVPARALVPVPDGVPFAQAAVATDAVLTPYHAVVRAGEVKPGETVLVIGLGG 176

Query: 193 IGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMG 252
           +GL  +  A+A GA  ++ VD+ + +L +AKELGAD   +V  +L D     +K    +G
Sbjct: 177 LGLNAVQIAKAMGA-AVIAVDIKEEKLELAKELGAD---EVLNSLDDSP--KDKKAAGLG 230

Query: 253 TGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY- 311
            G DV FD  G   T   A  A + GG++ +VG+G  ++TV L+    RE+ ++G F   
Sbjct: 231 GGFDVIFDFVGTQPTFEDAQKAVKPGGRIVVVGLGRDKLTVDLSDLIARELRIIGSFGGT 290

Query: 312 KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFN 363
               P  L+L+  GK+D  P V  R      E+ E  E   +G    +V+  
Sbjct: 291 PEDLPEVLDLIAKGKLD--PQVETR---PLDEIPEVLERLHKGKVKGRVVLV 337

This group contains enzymes of the zinc-dependent alcohol dehydrogenase family, including members (aka MDR) identified as 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase and N-benzyl-3-pyrrolidinol dehydrogenase. 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase catalyzes the conversion of 6-Hydroxycyclohex-1-enecarbonyl-CoA and NAD+ to 6-Ketoxycyclohex-1-ene-1-carboxyl-CoA,NADH, and H+. This group displays the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 338

>gnl|CDD|182130 PRK09880, PRK09880, L-idonate 5-dehydrogenase; Provisional

 Score =  196 bits (499), Expect = 8e-60
 Identities = 105/322 (32%), Positives = 157/322 (48%), Gaps = 15/322 (4%)

Query: 43  DVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVA 102
             LV++   GICGSD+HY +  +  +FV+K PMV+GHE  G I    S+   L  G  VA
Sbjct: 29  GTLVQITRGGICGSDLHYYQEGKVGNFVIKAPMVLGHEVIGKIVH--SDSSGLKEGQTVA 86

Query: 103 LEPGISCWRCDHCKGGRYNLCPEMKFFA----TPPVHGSLANQVVHPADLCFKLPDNVSL 158
           + P   C  C +C     N C  M+FF      P V G      V     C   P+    
Sbjct: 87  INPSKPCGHCKYCLSHNENQCTTMRFFGSAMYFPHVDGGFTRYKVVDTAQCIPYPEKADE 146

Query: 159 EEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYR 218
           +  A  EPL+V +HA  +A       V + G GPIG + +   +  GA  IV  DV    
Sbjct: 147 KVMAFAEPLAVAIHAAHQAGDLQGKRVFVSGVGPIGCLIVAAVKTLGAAEIVCADVSPRS 206

Query: 219 LSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAG 278
           LS+A+E+GAD +V    N Q+  ++++  +   G   DVSF+ +G   +++T L  TRA 
Sbjct: 207 LSLAREMGADKLV----NPQN--DDLDHYKAEKGY-FDVSFEVSGHPSSINTCLEVTRAK 259

Query: 279 GKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFG 338
           G +  VGMG      P+    V+E+ + G FR+   +   +  L +G I+  PL++  + 
Sbjct: 260 GVMVQVGMGGAPPEFPMMTLIVKEISLKGSFRFTEEFNTAVSWLANGVINPLPLLSAEYP 319

Query: 339 FSQKEVEEAFETSARGGTAIKV 360
           F+   +EEA   +     A KV
Sbjct: 320 FTD--LEEALIFAGDKTQAAKV 339

Length = 343

>gnl|CDD|176240 cd08279, Zn_ADH_class_III, Class III alcohol dehydrogenase

 Score =  194 bits (495), Expect = 6e-59
 Identities = 115/367 (31%), Positives = 163/367 (44%), Gaps = 40/367 (10%)

Query: 20  AAWLLGVN-TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIG 78
           AA L  V   L+I+  EL   GP +VLVR+ A G+C SD+H +      D     P V+G
Sbjct: 3   AAVLHEVGKPLEIEEVELDDPGPGEVLVRIAAAGLCHSDLHVVT----GDLPAPLPAVLG 58

Query: 79  HECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPE------MKFFATP 132
           HE AGV+E+VG  V  + PGD V L    +C  C +C  G+ NLC         +     
Sbjct: 59  HEGAGVVEEVGPGVTGVKPGDHVVLSWIPACGTCRYCSRGQPNLCDLGAGILGGQLPDGT 118

Query: 133 PVH-------------GSLANQVVHPADLCFKLPDNVSLEEGAM---CEPLSVGLHACRR 176
                           G+ A   V P     K+ D++ L+  A+        VG      
Sbjct: 119 RRFTADGEPVGAMCGLGTFAEYTVVPEASVVKIDDDIPLDRAALLGCGVTTGVG-AVVNT 177

Query: 177 ANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTN 236
           A + P   V ++G G +GL  + GAR  GA RI+ VD    +L +A+  GA + V  S  
Sbjct: 178 ARVRPGDTVAVIGCGGVGLNAIQGARIAGASRIIAVDPVPEKLELARRFGATHTVNASE- 236

Query: 237 LQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLT 296
             D  E V  +    G G D +F+  G   T+  AL+ TR GG   +VGMG    TV L 
Sbjct: 237 -DDAVEAVRDLTD--GRGADYAFEAVGRAATIRQALAMTRKGGTAVVVGMGPPGETVSLP 293

Query: 297 PA--AVREVDVVGVF----RYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFET 350
                + E  + G        +   P  L+L R+G++ +  LVT R+   +  + EAF  
Sbjct: 294 ALELFLSEKRLQGSLYGSANPRRDIPRLLDLYRAGRLKLDELVTRRYSLDE--INEAFAD 351

Query: 351 SARGGTA 357
              G  A
Sbjct: 352 MLAGENA 358

Glutathione-dependent formaldehyde dehydrogenases (FDHs, Class III ADH) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also known as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to corresponding carboxylic acid and alcohol. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 363

>gnl|CDD|223992 COG1064, AdhP, Zn-dependent alcohol dehydrogenases [General function prediction only]

 Score =  193 bits (492), Expect = 1e-58
 Identities = 103/332 (31%), Positives = 168/332 (50%), Gaps = 36/332 (10%)

Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADF-VVKEPMVIGHECAGVIEK 87
           L+I+   +P  GP +VL++++A G+C +D+H  K     D+ V K P++ GHE  G + +
Sbjct: 16  LEIEEVPVPEPGPGEVLIKVEACGVCHTDLHVAK----GDWPVPKLPLIPGHEIVGTVVE 71

Query: 88  VGSEVKTLVPGDRVALE-PGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPA 146
           VG  V  L  GDRV +    ISC  C++C+ G  NLCP  +        G  A  VV PA
Sbjct: 72  VGEGVTGLKVGDRVGVGWLVISCGECEYCRSGNENLCPN-QKITGYTTDGGYAEYVVVPA 130

Query: 147 DLCFKLPDNVSLEEGAMCEPLS-VGL---HACRRANIGPETNVLIMGAGPIGLVTMLGAR 202
               K+P+ + L E A   PL   G+    A ++AN+ P   V ++GAG +G + +  A+
Sbjct: 131 RYVVKIPEGLDLAEAA---PLLCAGITTYRALKKANVKPGKWVAVVGAGGLGHMAVQYAK 187

Query: 203 AFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCA 262
           A GA  ++ +   + +L +AK+LGAD++  ++++  D  E V++I        D   D  
Sbjct: 188 AMGA-EVIAITRSEEKLELAKKLGADHV--INSSDSDALEAVKEI-------ADAIIDTV 237

Query: 263 GFNKTMSTALSATRAGGKVCLVGM--GHHEMTVPLTPAAVREVDVVG--VFRYKNTWPLC 318
           G   T+  +L A R GG + LVG+  G     +P     ++E+ +VG  V    +     
Sbjct: 238 G-PATLEPSLKALRRGGTLVLVGLPGGGPIPLLPAFLLILKEISIVGSLVGTRADL---- 292

Query: 319 LELLR-SGKIDVKPLVTHRFGFSQKEVEEAFE 349
            E L  + +  +KP +         E+ EA+E
Sbjct: 293 EEALDFAAEGKIKPEILETIPLD--EINEAYE 322

Length = 339

>gnl|CDD|176245 cd08285, NADP_ADH, NADP(H)-dependent alcohol dehydrogenases

 Score =  188 bits (479), Expect = 9e-57
 Identities = 111/347 (31%), Positives = 157/347 (45%), Gaps = 31/347 (8%)

Query: 20  AAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGH 79
           A  +LG+  +      +P  GP D +VR  AV  C SDVH   T+       +  M++GH
Sbjct: 3   AFAMLGIGKVGWIEKPIPVCGPNDAIVRPTAVAPCTSDVH---TVWGGAPGERHGMILGH 59

Query: 80  ECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEM----KFFATPPVH 135
           E  GV+E+VGSEVK   PGDRV +      WR    + G  +    M    KF  +    
Sbjct: 60  EAVGVVEEVGSEVKDFKPGDRVIVPAITPDWRSVAAQRGYPSQSGGMLGGWKF--SNFKD 117

Query: 136 GSLANQV-VHPADLCF-KLPDNVSLEEGAMC-EPLSVGLHACRRANIGPETNVLIMGAGP 192
           G  A    V+ AD     LPD ++ E+  M  + +S G H    ANI     V + G GP
Sbjct: 118 GVFAEYFHVNDADANLAPLPDGLTDEQAVMLPDMMSTGFHGAELANIKLGDTVAVFGIGP 177

Query: 193 IGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMG 252
           +GL+ + GAR  GA RI+ V     R+ +AKE GA +IV    N  D+ E++ K+    G
Sbjct: 178 VGLMAVAGARLRGAGRIIAVGSRPNRVELAKEYGATDIVDY-KN-GDVVEQILKLTG--G 233

Query: 253 TGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYK 312
            G+D      G   T   AL   + GG +  V     +  +P+     RE   VG+    
Sbjct: 234 KGVDAVIIAGGGQDTFEQALKVLKPGGTISNVNYYGEDDYLPI----PREEWGVGMGHKT 289

Query: 313 NTWPLC----------LELLRSGKIDVKPLVTHRFGFSQKEVEEAFE 349
               LC            L+  G++D   L+TH F F   ++EEA  
Sbjct: 290 INGGLCPGGRLRMERLASLIEYGRVDPSKLLTHHF-FGFDDIEEALM 335

This group is predominated by atypical alcohol dehydrogenases; they exist as tetramers and exhibit specificity for NADP(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like other zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric ADHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains; however, they do not have and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 351

>gnl|CDD|223990 COG1062, AdhC, Zn-dependent alcohol dehydrogenases, class III [Energy production and conversion]

 Score =  186 bits (475), Expect = 7e-56
 Identities = 101/360 (28%), Positives = 157/360 (43%), Gaps = 51/360 (14%)

Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
           L+I+  +L      +VLVR+ A G+C +D H L       F    P V+GHE AG++E V
Sbjct: 15  LEIEEVDLDPPRAGEVLVRITATGVCHTDAHTLSGDDPEGF----PAVLGHEGAGIVEAV 70

Query: 89  GSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFAT----------------- 131
           G  V ++ PGD V L     C +C  C  G+ NLC      AT                 
Sbjct: 71  GEGVTSVKPGDHVILLFTPECGQCKFCLSGKPNLC--EAIRATQGKGTMPDGTTRLSGNG 128

Query: 132 -PPVH----GSLANQVVHPADLCFKLPDNVSLEEGAM--CEPLSVGLHACRRANIGPETN 184
            P  H     + A   V       K+  +  LE+  +  C   +        A + P   
Sbjct: 129 VPVYHYLGCSTFAEYTVVHEISLVKIDPDAPLEKACLLGCGVTTGIGAVVNTAKVEPGDT 188

Query: 185 VLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEV 244
           V + G G +GL  + GA+A GA RI+ VD++  +L +AK+ GA + V    N +++ + V
Sbjct: 189 VAVFGLGGVGLAAIQGAKAAGAGRIIAVDINPEKLELAKKFGATHFV----NPKEVDDVV 244

Query: 245 EKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAVREVD 304
           E I +    G D +F+C G  + M  AL AT  GG   ++G+      +   P       
Sbjct: 245 EAIVELTDGGADYAFECVGNVEVMRQALEATHRGGTSVIIGVAGAGQEISTRP-----FQ 299

Query: 305 VVGVFRYKNTW----------PLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARG 354
           +V    +K +           P  ++L  +GK+ +  LVTH      +++ EAF+    G
Sbjct: 300 LVTGRVWKGSAFGGARPRSDIPRLVDLYMAGKLPLDRLVTHTIPL--EDINEAFDLMHEG 357

Length = 366

>gnl|CDD|176187 cd05284, arabinose_DH_like, D-arabinose dehydrogenase

 Score =  185 bits (471), Expect = 1e-55
 Identities = 100/336 (29%), Positives = 160/336 (47%), Gaps = 28/336 (8%)

Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
           L+++   +P  GP  VLVR+   G+C SD+H +  +       K P  +GHE AG +E+V
Sbjct: 13  LRLEDVPVPEPGPGQVLVRVGGAGVCHSDLHVIDGVWGGILPYKLPFTLGHENAGWVEEV 72

Query: 89  GSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPV--HGSLANQVVHPA 146
           GS V  L  GD V + P   C  C +C+ G  N C   +F   P +   G  A  ++ P+
Sbjct: 73  GSGVDGLKEGDPVVVHPPWGCGTCRYCRRGEENYCENARF---PGIGTDGGFAEYLLVPS 129

Query: 147 DLCFKLPDNVSLEEGAMCEPLS-VGL---HACRRAN--IGPETNVLIMGAGPIGLVTMLG 200
               KLP  +   E A   PL+  GL   HA ++A   + P + V+++G G +G + +  
Sbjct: 130 RRLVKLPRGLDPVEAA---PLADAGLTAYHAVKKALPYLDPGSTVVVIGVGGLGHIAVQI 186

Query: 201 ARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD 260
            RA     ++ VD  +  L +A+ LGAD+++  S    D+ EEV ++    G G D   D
Sbjct: 187 LRALTPATVIAVDRSEEALKLAERLGADHVLNASD---DVVEEVRELTG--GRGADAVID 241

Query: 261 CAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVF--RYKNTWPLC 318
             G ++T++ A      GG+  +VG G H   +P +     E+ V+G           + 
Sbjct: 242 FVGSDETLALAAKLLAKGGRYVIVGYGGH-GRLPTSDLVPTEISVIGSLWGTRAELVEV- 299

Query: 319 LELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARG 354
           + L  SGK+  K  +T    F  ++  EA +    G
Sbjct: 300 VALAESGKV--KVEITK---FPLEDANEALDRLREG 330

This group contains arabinose dehydrogenase (AraDH) and related alcohol dehydrogenases. AraDH is a member of the medium chain dehydrogenase/reductase family and catalyzes the NAD(P)-dependent oxidation of D-arabinose and other pentoses, the initial step in the metabolism of d-arabinose into 2-oxoglutarate. Like the alcohol dehydrogenases, AraDH binds a zinc in the catalytic cleft as well as a distal structural zinc. AraDH forms homotetramers as a dimer of dimers. AraDH replaces a conserved catalytic His with replace with Arg, compared to the canonical ADH site. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 340

>gnl|CDD|176193 cd08231, MDR_TM0436_like, Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH)

 Score =  181 bits (461), Expect = 6e-54
 Identities = 117/372 (31%), Positives = 165/372 (44%), Gaps = 44/372 (11%)

Query: 18  NMAAWLLGVNT-LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMV 76
             AA L G    L+I+   LP L P  VLVR++  G+CGSDVH   T+      V  P++
Sbjct: 1   ARAAVLTGPGKPLEIREVPLPDLEPGAVLVRVRLAGVCGSDVH---TVAGRRPRVPLPII 57

Query: 77  IGHECAGVIEKVGSEVKT------LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFF- 129
           +GHE  G +  +G  V T      L  GDRV    G  C RC  C  G    C   K + 
Sbjct: 58  LGHEGVGRVVALGGGVTTDVAGEPLKVGDRVTWSVGAPCGRCYRCLVGDPTKCENRKKYG 117

Query: 130 -----ATPPVHGSLANQVVHPADLCF-KLPDNVSLE--EGAMCEPLSVGLHACRRAN-IG 180
                  P + G  A  +  P      ++PDNV  E    A C  L+  L A  RA  +G
Sbjct: 118 HEASCDDPHLSGGYAEHIYLPPGTAIVRVPDNVPDEVAAPANC-ALATVLAALDRAGPVG 176

Query: 181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDI 240
               V++ GAGP+GL  +  A+  GA R++++D    RL +A+E GAD  + +       
Sbjct: 177 AGDTVVVQGAGPLGLYAVAAAKLAGARRVIVIDGSPERLELAREFGADATIDIDE----- 231

Query: 241 AEEVEKIQKAM----GTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLT 296
             + ++         G G DV  + +G    +   L   R GG   LVG      TVPL 
Sbjct: 232 LPDPQRRAIVRDITGGRGADVVIEASGHPAAVPEGLELLRRGGTYVLVGSVAPAGTVPLD 291

Query: 297 PAAV--REVDVVGVFRYKNTWPLCL----ELLR--SGKIDVKPLVTHRFGFSQKEVEEAF 348
           P  +  + + ++GV  Y    P  L      L     +     LVTHR  +  +++ EA 
Sbjct: 292 PERIVRKNLTIIGVHNYD---PSHLYRAVRFLERTQDRFPFAELVTHR--YPLEDINEAL 346

Query: 349 ETSARGGTAIKV 360
           E  A  GTA+KV
Sbjct: 347 E-LAESGTALKV 357

This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 361

>gnl|CDD|176244 cd08284, FDH_like_2, Glutathione-dependent formaldehyde dehydrogenase related proteins, child 2

 Score =  179 bits (457), Expect = 2e-53
 Identities = 107/332 (32%), Positives = 160/332 (48%), Gaps = 22/332 (6%)

Query: 40  GPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGD 99
            P D +V++ A  ICGSD+H  +             V+GHE  G + +VG EV+TL  GD
Sbjct: 24  DPTDAIVKVTAAAICGSDLHIYR----GHIPSTPGFVLGHEFVGEVVEVGPEVRTLKVGD 79

Query: 100 RVALEPGISCWRCDHCKGGRYNLCPEMKFF---ATPPVHGSLANQVVHP-ADL-CFKLPD 154
           RV     I+C  C +C+ G+   C +   F    +P + G+ A  V  P AD    KLPD
Sbjct: 80  RVVSPFTIACGECFYCRRGQSGRCAKGGLFGYAGSPNLDGAQAEYVRVPFADGTLLKLPD 139

Query: 155 NVSLEEG-AMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVD 213
            +S E    + + L  G    +RA + P   V ++G GP+GL  +L A+  GA R+  VD
Sbjct: 140 GLSDEAALLLGDILPTGYFGAKRAQVRPGDTVAVIGCGPVGLCAVLSAQVLGAARVFAVD 199

Query: 214 VDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAM-GTGIDVSFDCAGFNKTMSTAL 272
               RL  A  LGA+ I     N +D AE VE++++A  G G DV  +  G    +  A 
Sbjct: 200 PVPERLERAAALGAEPI-----NFED-AEPVERVREATEGRGADVVLEAVGGAAALDLAF 253

Query: 273 SATRAGGKVCLVGMGH-HEMTVPLTPAAVREVDV-VGVFRYKNTWPLCLELLRSGKIDVK 330
              R GG +  VG+    E   P   A  + + +  G    ++ +P  L LL SG++D++
Sbjct: 254 DLVRPGGVISSVGVHTAEEFPFPGLDAYNKNLTLRFGRCPVRSLFPELLPLLESGRLDLE 313

Query: 331 PLVTHRFGFSQKEVEEAFETSARGGTAIKVMF 362
            L+ HR      E  EA+    +    +KV+ 
Sbjct: 314 FLIDHRMPLE--EAPEAYRLFDK-RKVLKVVL 342

Glutathione-dependent formaldehyde dehydrogenases (FDHs) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. These tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 344

>gnl|CDD|176218 cd08256, Zn_ADH2, Alcohol dehydrogenases of the MDR family

 Score =  177 bits (452), Expect = 9e-53
 Identities = 103/345 (29%), Positives = 180/345 (52%), Gaps = 23/345 (6%)

Query: 30  KIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFV---------VKEPMVIGHE 80
           +++   +P  GP ++LV+++A GIC  D   +K    A            VK PM+ GHE
Sbjct: 13  RLEEVPVPRPGPGEILVKVEACGICAGD---IKCYHGAPSFWGDENQPPYVKPPMIPGHE 69

Query: 81  CAGVIEKVGSEVKT--LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFA-TPPVHGS 137
             G + ++G   +   +  GDRV  E  + CW C  C  G+Y +C +   +     V+G 
Sbjct: 70  FVGRVVELGEGAEERGVKVGDRVISEQIVPCWNCRFCNRGQYWMCQKHDLYGFQNNVNGG 129

Query: 138 LANQVVHPAD-LCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLV 196
           +A  +  P + +  K+PD++  E+  + EPL+  LHA  RANI  +  V++ GAGP+GL 
Sbjct: 130 MAEYMRFPKEAIVHKVPDDIPPEDAILIEPLACALHAVDRANIKFDDVVVLAGAGPLGLG 189

Query: 197 TMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGID 256
            +  AR     +++++D+ D RL++A++ GAD ++       D+ E+++++    G G D
Sbjct: 190 MIGAARLKNPKKLIVLDLKDERLALARKFGADVVLNPPE--VDVVEKIKELTG--GYGCD 245

Query: 257 VSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAVR-EVDVVGVFRYKNTW 315
           +  +  G    +   L+  R  G+     +    +TV  +    R E+DV+G       +
Sbjct: 246 IYIEATGHPSAVEQGLNMIRKLGRFVEFSVFGDPVTVDWSIIGDRKELDVLGSHLGPYCY 305

Query: 316 PLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKV 360
           P+ ++L+ SG++    +VTH+  F  ++ EEAFE  ARG  +IKV
Sbjct: 306 PIAIDLIASGRLPTDGIVTHQ--FPLEDFEEAFELMARGDDSIKV 348

This group has the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 350

>gnl|CDD|176246 cd08286, FDH_like_ADH2, formaldehyde dehydrogenase (FDH)-like

 Score =  176 bits (449), Expect = 2e-52
 Identities = 114/347 (32%), Positives = 172/347 (49%), Gaps = 24/347 (6%)

Query: 25  GVNTLKIQPFELPSL-GPYDVLVRMKAVGICGSDVHYLKTLRCADFV-VKEPMVIGHECA 82
           G   +  +    P++  P D +V+M    ICG+D+H LK     D   V    ++GHE  
Sbjct: 8   GPGKISWEDRPKPTIQEPTDAIVKMLKTTICGTDLHILK----GDVPTVTPGRILGHEGV 63

Query: 83  GVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQV 142
           GV+E+VGS V     GDRV +    SC  C +C+ G Y+ C    +     + G+ A  V
Sbjct: 64  GVVEEVGSAVTNFKVGDRVLISCISSCGTCGYCRKGLYSHCESGGWILGNLIDGTQAEYV 123

Query: 143 VHP-ADLC-FKLPDNVSLEEGAMCEPLSVGL---HAC--RRANIGPETNVLIMGAGPIGL 195
             P AD   +KLP+ V  E   M   LS  L   + C      + P   V I+GAGP+GL
Sbjct: 124 RIPHADNSLYKLPEGVDEEAAVM---LSDILPTGYECGVLNGKVKPGDTVAIVGAGPVGL 180

Query: 196 VTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGI 255
             +L A+ +   +I++VD+DD RL VAK+LGA + V  +    D  E+V ++    G G+
Sbjct: 181 AALLTAQLYSPSKIIMVDLDDNRLEVAKKLGATHTVNSAK--GDAIEQVLELTD--GRGV 236

Query: 256 DVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKNTW 315
           DV  +  G   T          GG +  VG+    + + L    ++ + +       NT 
Sbjct: 237 DVVIEAVGIPATFELCQELVAPGGHIANVGVHGKPVDLHLEKLWIKNITITTGLVDTNTT 296

Query: 316 PLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGT--AIKV 360
           P+ L+L+ SGK+D   LVTHRF  S  E+E+A++T +      A+KV
Sbjct: 297 PMLLKLVSSGKLDPSKLVTHRFKLS--EIEKAYDTFSAAAKHKALKV 341

This group is related to formaldehyde dehydrogenase (FDH), which is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. This family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Another member is identified as a dihydroxyacetone reductase. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 345

>gnl|CDD|176239 cd08278, benzyl_alcohol_DH, Benzyl alcohol dehydrogenase

 Score =  171 bits (436), Expect = 3e-50
 Identities = 108/369 (29%), Positives = 154/369 (41%), Gaps = 60/369 (16%)

Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
             ++  EL    P +VLVR+ A GIC +D+     +R        P V+GHE AGV+E V
Sbjct: 15  FVLEDVELDDPRPDEVLVRIVATGICHTDLV----VRDGGLPTPLPAVLGHEGAGVVEAV 70

Query: 89  GSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEM---KFFAT-------------P 132
           GS V  L PGD V L    SC  C +C  G    C       F                 
Sbjct: 71  GSAVTGLKPGDHVVLSFA-SCGECANCLSGHPAYCENFFPLNFSGRRPDGSTPLSLDDGT 129

Query: 133 PVHG------SLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHA-----CRRANIGP 181
           PVHG      S A   V       K+  +V LE  A   PL  G+              P
Sbjct: 130 PVHGHFFGQSSFATYAVVHERNVVKVDKDVPLELLA---PLGCGIQTGAGAVLNVLKPRP 186

Query: 182 ETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIA 241
            +++ + GAG +GL  ++ A+  G   I+ VD+ D RL +AKELGA +++      +D+ 
Sbjct: 187 GSSIAVFGAGAVGLAAVMAAKIAGCTTIIAVDIVDSRLELAKELGATHVINPKE--EDL- 243

Query: 242 EEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMG--HHEMTVPLTPAA 299
             V  I++  G G+D + D  G    +  A+ A    G + LVG      E+T+ +    
Sbjct: 244 --VAAIREITGGGVDYALDTTGVPAVIEQAVDALAPRGTLALVGAPPPGAEVTLDVNDLL 301

Query: 300 VREVDVVGV---------FRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFET 350
           V    + GV         F      P  +EL R GK     LVT    +  +++ +A   
Sbjct: 302 VSGKTIRGVIEGDSVPQEF-----IPRLIELYRQGKFPFDKLVTF---YPFEDINQAIAD 353

Query: 351 SARGGTAIK 359
           S  G   IK
Sbjct: 354 SESGKV-IK 361

Benzyl alcohol dehydrogenase is similar to liver alcohol dehydrogenase, but has some amino acid substitutions near the active site, which may determine the enzyme's specificity of oxidizing aromatic substrates. Also known as aryl-alcohol dehydrogenases, they catalyze the conversion of an aromatic alcohol + NAD+ to an aromatic aldehyde + NADH + H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 365

>gnl|CDD|176223 cd08262, Zn_ADH8, Alcohol dehydrogenases of the MDR family

 Score =  169 bits (431), Expect = 1e-49
 Identities = 100/355 (28%), Positives = 151/355 (42%), Gaps = 28/355 (7%)

Query: 19  MAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPM--- 75
           M A +     L ++    P  GP  VLV++ A GICGSD+H              P    
Sbjct: 1   MRAAVFRDGPLVVRDVPDPEPGPGQVLVKVLACGICGSDLHATAHPEAMVDDAGGPSLMD 60

Query: 76  -----VIGHECAGVIEKVGSEV-KTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFF 129
                V+GHE  G +   G    + L  G RV   P + C +   C  G     P     
Sbjct: 61  LGADIVLGHEFCGEVVDYGPGTERKLKVGTRVTSLPLLLCGQGASCGIGLSPEAP----- 115

Query: 130 ATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMG 189
                 G  A  ++    L  ++PD +S+E+ A+ EPL+VGLHA RRA + P    L++G
Sbjct: 116 ------GGYAEYMLLSEALLLRVPDGLSMEDAALTEPLAVGLHAVRRARLTPGEVALVIG 169

Query: 190 AGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQK 249
            GPIGL  +   +A G   IV  D    R ++A  +GAD +V  + +    A   E  + 
Sbjct: 170 CGPIGLAVIAALKARGVGPIVASDFSPERRALALAMGADIVVDPAADSPFAAWAAELARA 229

Query: 250 AMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAA--VREVDVVG 307
                  V F+C G    +   +     GG++ +VG+     +  + PA    +E+ +  
Sbjct: 230 GGPKP-AVIFECVGAPGLIQQIIEGAPPGGRIVVVGV--CMESDNIEPALAIRKELTLQF 286

Query: 308 VFRY-KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVM 361
              Y    +   L+ L  GK+DV P+VT   G     V +AFE         K++
Sbjct: 287 SLGYTPEEFADALDALAEGKVDVAPMVTGTVGLD--GVPDAFEALRDPEHHCKIL 339

The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 341

>gnl|CDD|176243 cd08283, FDH_like_1, Glutathione-dependent formaldehyde dehydrogenase related proteins, child 1

 Score =  167 bits (425), Expect = 2e-48
 Identities = 109/374 (29%), Positives = 162/374 (43%), Gaps = 70/374 (18%)

Query: 41  PYDVLVRMKAVGICGSDVH----YLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLV 96
           P D +VR+ A  ICGSD+H    Y+  +       K+  ++GHE  GV+E+VG EV+ L 
Sbjct: 25  PTDAIVRVTATAICGSDLHLYHGYIPGM-------KKGDILGHEFMGVVEEVGPEVRNLK 77

Query: 97  PGDRVALEPGISCWRCDHCKGGRYNLC------PEMK---------FF----ATPPVHGS 137
            GDRV +   I+C  C +CK G Y+ C       EM           F     T    G 
Sbjct: 78  VGDRVVVPFTIACGECFYCKRGLYSQCDNTNPSAEMAKLYGHAGAGIFGYSHLTGGYAGG 137

Query: 138 LANQVVHP-ADL-CFKLPDNVSLEEGA-MCEPLSVGLHACRRANIGPETNVLIMGAGPIG 194
            A  V  P AD+  FK+PD++S E+   + + L  G HA   A + P   V + G GP+G
Sbjct: 138 QAEYVRVPFADVGPFKIPDDLSDEKALFLSDILPTGYHAAELAEVKPGDTVAVWGCGPVG 197

Query: 195 LVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTG 254
           L     A+  GA R++ +D    RL +A+       +     + D+ E + ++    G G
Sbjct: 198 LFAARSAKLLGAERVIAIDRVPERLEMARSHLGAETINF-EEVDDVVEALRELTG--GRG 254

Query: 255 IDVSFDCAGFN-------KTMST--------------ALSATRAGGKVCLVG--MGHHEM 291
            DV  D  G         K                  A+ A R GG V ++G   G    
Sbjct: 255 PDVCIDAVGMEAHGSPLHKAEQALLKLETDRPDALREAIQAVRKGGTVSIIGVYGGTVN- 313

Query: 292 TVPLTPAAVREVDVVG----VFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEA 347
             P+  A  + + +      V RY    P  LEL+ SG++D   ++THR      +  EA
Sbjct: 314 KFPIGAAMNKGLTLRMGQTHVQRY---LPRLLELIESGELDPSFIITHRLPLE--DAPEA 368

Query: 348 FET-SARGGTAIKV 360
           ++    +    IKV
Sbjct: 369 YKIFDKKEDGCIKV 382

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 386

>gnl|CDD|176221 cd08260, Zn_ADH6, Alcohol dehydrogenases of the MDR family

 Score =  161 bits (409), Expect = 2e-46
 Identities = 107/354 (30%), Positives = 164/354 (46%), Gaps = 48/354 (13%)

Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
           L+I+    P   P  V+V ++A G+C SD H     +  D  V  P V GHE AGV+ +V
Sbjct: 13  LEIREVPDPEPPPDGVVVEVEACGVCRSDWH---GWQGHDPDVTLPHVPGHEFAGVVVEV 69

Query: 89  GSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPP---VHGSLANQV-VH 144
           G +V     GDRV +   + C  C +C+ G  N+C         P     GS A  V V 
Sbjct: 70  GEDVSRWRVGDRVTVPFVLGCGTCPYCRAGDSNVCEHQ----VQPGFTHPGSFAEYVAVP 125

Query: 145 PADL-CFKLPDNVSLEEGAMCEPLSVGLHACR----------RANIGPETNVLIMGAGPI 193
            AD+   +LPD+V     A      +G   CR          +A + P   V + G G +
Sbjct: 126 RADVNLVRLPDDVDFVTAA-----GLG---CRFATAFRALVHQARVKPGEWVAVHGCGGV 177

Query: 194 GLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGT 253
           GL  ++ A A GA R++ VD+DD +L +A+ELGA   V  ++ ++D+A  V  +    G 
Sbjct: 178 GLSAVMIASALGA-RVIAVDIDDDKLELARELGAVATVN-ASEVEDVAAAVRDL---TGG 232

Query: 254 GIDVSFDCAGFNKTMSTALSATRAGGKVCLVGM---GHHEMTVPLTPAAVREVDVVGVF- 309
           G  VS D  G  +T   ++++ R  G+   VG+       + +P+     RE+++VG   
Sbjct: 233 GAHVSVDALGIPETCRNSVASLRKRGRHVQVGLTLGEEAGVALPMDRVVARELEIVGSHG 292

Query: 310 ----RYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQ-KEVEEAFETSARGGTAI 358
               RY       L L+ SGK+D +PLV       +  +   A +  A  G  +
Sbjct: 293 MPAHRY----DAMLALIASGKLDPEPLVGRTISLDEAPDALAAMDDYATAGITV 342

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group has the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 345

>gnl|CDD|176182 cd05279, Zn_ADH1, Liver alcohol dehydrogenase and related zinc-dependent alcohol dehydrogenases

 Score =  161 bits (410), Expect = 2e-46
 Identities = 97/360 (26%), Positives = 156/360 (43%), Gaps = 43/360 (11%)

Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
           L I+  E+      +V +++ A G+C +D+H +            P+++GHE AG++E +
Sbjct: 13  LSIEEIEVAPPKAGEVRIKVVATGVCHTDLHVID----GKLPTPLPVILGHEGAGIVESI 68

Query: 89  GSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATP---------------- 132
           G  V TL PGD+V    G  C +C  C   R NLC   K   T                 
Sbjct: 69  GPGVTTLKPGDKVIPLFGPQCGKCKQCLNPRPNLC--SKSRGTNGRGLMSDGTSRFTCKG 126

Query: 133 -PVH-----GSLANQVVHPADLCFKLPDNVSLEEGAM--CEPLSVGLHAC-RRANIGPET 183
            P+H      + A   V       K+  +  LE+  +  C   S G  A    A + P +
Sbjct: 127 KPIHHFLGTSTFAEYTVVSEISLAKIDPDAPLEKVCLIGCG-FSTGYGAAVNTAKVTPGS 185

Query: 184 NVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEE 243
              + G G +GL  ++G +A GA RI+ VD++  +   AK+LGA   +      + I   
Sbjct: 186 TCAVFGLGGVGLSVIMGCKAAGASRIIAVDINKDKFEKAKQLGATECINPRDQDKPI--- 242

Query: 244 VEKIQKAMGTGIDVSFDCAGFNKTMSTALSATR-AGGKVCLVGMGHHEMTVPLTPAAVRE 302
           VE + +    G+D +F+  G   T+  AL ATR  GG   +VG+        L P  +  
Sbjct: 243 VEVLTEMTDGGVDYAFEVIGSADTLKQALDATRLGGGTSVVVGVPPSGTEATLDPNDLLT 302

Query: 303 -----VDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTA 357
                  V G ++ K++ P  + L R  K  +  L+TH   F  +E+ + F+    G + 
Sbjct: 303 GRTIKGTVFGGWKSKDSVPKLVALYRQKKFPLDELITHVLPF--EEINDGFDLMRSGESI 360

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the substrate binding pocket and therefore in substrate specificity. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48), then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 365

>gnl|CDD|176224 cd08263, Zn_ADH10, Alcohol dehydrogenases of the MDR family

 Score =  161 bits (409), Expect = 3e-46
 Identities = 110/364 (30%), Positives = 172/364 (47%), Gaps = 46/364 (12%)

Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
           L I+   +P     ++L+R+ A G+C SD+H LK     +     P V+GHE +G + +V
Sbjct: 13  LTIEEIPVPRPKEGEILIRVAACGVCHSDLHVLK----GELPFPPPFVLGHEISGEVVEV 68

Query: 89  GSEVK---TLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFA--------------- 130
           G  V+    L  GDRV     + C +C +C  G+ NLC    FFA               
Sbjct: 69  GPNVENPYGLSVGDRVVGSFIMPCGKCRYCARGKENLCE--DFFAYNRLKGTLYDGTTRL 126

Query: 131 ----TPPVH----GSLANQVVHPADLCFKLPDNVSLEEGAM--CEPLSVGLHACRRAN-I 179
                 PV+    G LA   V PA     LP+++   E A+  C   +    A + A  +
Sbjct: 127 FRLDGGPVYMYSMGGLAEYAVVPATALAPLPESLDYTESAVLGCAGFT-AYGALKHAADV 185

Query: 180 GPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQD 239
            P   V ++G G +G   +  A+AFGA  I+ VDV D +L+ AKELGA +   V+   +D
Sbjct: 186 RPGETVAVIGVGGVGSSAIQLAKAFGASPIIAVDVRDEKLAKAKELGATHT--VNAAKED 243

Query: 240 IAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMT--VPLTP 297
               + +I    G G+DV  +  G  +T   AL   R GG+  +VG+     T  +P+T 
Sbjct: 244 AVAAIREI--TGGRGVDVVVEALGKPETFKLALDVVRDGGRAVVVGLAPGGATAEIPITR 301

Query: 298 AAVREVDVVGVFRYK--NTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGG 355
              R + ++G +  +     P  + L  SGK+D + LVTH++    +E+ EA+E   +G 
Sbjct: 302 LVRRGIKIIGSYGARPRQDLPELVGLAASGKLDPEALVTHKYKL--EEINEAYENLRKGL 359

Query: 356 TAIK 359
              +
Sbjct: 360 IHGR 363

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 367

>gnl|CDD|176220 cd08259, Zn_ADH5, Alcohol dehydrogenases of the MDR family

 Score =  160 bits (406), Expect = 3e-46
 Identities = 101/328 (30%), Positives = 160/328 (48%), Gaps = 29/328 (8%)

Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
           L+I+    P  GP +VL+++KA G+C  D+ + K         K P+++GHE  G +E+V
Sbjct: 13  LQIEEVPDPEPGPGEVLIKVKAAGVCYRDLLFWKGFFPR---GKYPLILGHEIVGTVEEV 69

Query: 89  GSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADL 148
           G  V+   PGDRV L   I C +C++C  G  NLC     +    V G  A  V  P   
Sbjct: 70  GEGVERFKPGDRVILYYYIPCGKCEYCLSGEENLCRNRAEYGE-EVDGGFAEYVKVPERS 128

Query: 149 CFKLPDNVSLEEGA--MCEPLSVGLHACRRANIGPETNVLIMGAGP---IGLVTMLGARA 203
             KLPDNVS E  A   C  +   +HA +RA +     VL+ GAG    I  + +  A+A
Sbjct: 129 LVKLPDNVSDESAALAAC-VVGTAVHALKRAGVKKGDTVLVTGAGGGVGIHAIQL--AKA 185

Query: 204 FGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAG 263
            GA R++ V     +L + KELGAD ++    +    +E+V+K+      G DV  +  G
Sbjct: 186 LGA-RVIAVTRSPEKLKILKELGADYVI----DGSKFSEDVKKL-----GGADVVIELVG 235

Query: 264 FNKTMSTALSATRAGGKVCLVG-MGHHEMTVPLTPAAVREVDVVGVFRY-KNTWPLCLEL 321
            + T+  +L +   GG++ L+G +      +      ++E+ ++G     K      L+L
Sbjct: 236 -SPTIEESLRSLNKGGRLVLIGNVTPDPAPLRPGLLILKEIRIIGSISATKADVEEALKL 294

Query: 322 LRSGKIDVKPLVTHRFGFSQKEVEEAFE 349
           ++ GKI  KP++          + EA E
Sbjct: 295 VKEGKI--KPVIDRVVSLED--INEALE 318

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48), then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 332

>gnl|CDD|182371 PRK10309, PRK10309, galactitol-1-phosphate dehydrogenase; Provisional

 Score =  158 bits (401), Expect = 2e-45
 Identities = 101/318 (31%), Positives = 159/318 (50%), Gaps = 44/318 (13%)

Query: 41  PYDVLVRMKAVGICGSDV--------HYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEV 92
             DVLV++ + G+CGSD+        HY             P+ +GHE +G +E VGS V
Sbjct: 25  QDDVLVKVASSGLCGSDIPRIFKNGAHYY------------PITLGHEFSGYVEAVGSGV 72

Query: 93  KTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKL 152
             L PGD VA  P + C+ C  C  G Y+LC +  F  +    G+    VV   +L F L
Sbjct: 73  DDLHPGDAVACVPLLPCFTCPECLRGFYSLCAKYDFIGSRRDGGNAEYIVVKRKNL-FAL 131

Query: 153 PDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIV 212
           P ++ +E+GA  EP++VGLHA   A      NV+I+GAG IGL+ +  A A GA  +  +
Sbjct: 132 PTDMPIEDGAFIEPITVGLHAFHLAQGCEGKNVIIIGAGTIGLLAIQCAVALGAKSVTAI 191

Query: 213 DVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD-----CAGFNKT 267
           D++  +L++AK LGA        N ++++    +IQ  +    ++ FD      AG  +T
Sbjct: 192 DINSEKLALAKSLGAMQTF----NSREMS--APQIQSVLR---ELRFDQLILETAGVPQT 242

Query: 268 MSTALSATRAGGKVCLVGMGHHEMTVPLTPAAV---REVDVVGVF-RYKNTWP-----LC 318
           +  A+       ++ LVG  HH++ +          +E+ V+G +  Y + WP       
Sbjct: 243 VELAIEIAGPRAQLALVGTLHHDLHLTSATFGKILRKELTVIGSWMNYSSPWPGQEWETA 302

Query: 319 LELLRSGKIDVKPLVTHR 336
             LL   K+ ++PL+ HR
Sbjct: 303 SRLLTERKLSLEPLIAHR 320

Length = 347

>gnl|CDD|176226 cd08265, Zn_ADH3, Alcohol dehydrogenases of the MDR family

 Score =  159 bits (403), Expect = 2e-45
 Identities = 99/340 (29%), Positives = 165/340 (48%), Gaps = 22/340 (6%)

Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADF----VVKEPMVIGHECAGV 84
           L+++   +P+L P ++L+R+KA GICGSD+H  +T +        + + P+VIGHE +GV
Sbjct: 39  LRVEDVPVPNLKPDEILIRVKACGICGSDIHLYETDKDGYILYPGLTEFPVVIGHEFSGV 98

Query: 85  IEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVH 144
           +EK G  VK    GD V  E  + C  C  C+ G  N C  +K        G+ A  +  
Sbjct: 99  VEKTGKNVKNFEKGDPVTAEEMMWCGMCRACRSGSPNHCKNLKELGF-SADGAFAEYIAV 157

Query: 145 PADLCFKLPDNV-------SLEEGAMCEPLSVGLHAC--RRANIGPETNVLIMGAGPIGL 195
            A   +++ +         + E GA+ EP SV  +    R     P   V++ GAGPIGL
Sbjct: 158 NARYAWEINELREIYSEDKAFEAGALVEPTSVAYNGLFIRGGGFRPGAYVVVYGAGPIGL 217

Query: 196 VTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAM-GTG 254
             +  A+A GA +++  ++ + R ++AKE+GAD +   +          EK+ +   G G
Sbjct: 218 AAIALAKAAGASKVIAFEISEERRNLAKEMGADYV--FNPTKMRDCLSGEKVMEVTKGWG 275

Query: 255 IDVSFDCAG-FNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKN 313
            D+  + AG    T+     +    GK+  +G     + + L    VR   +VG   +  
Sbjct: 276 ADIQVEAAGAPPATIPQMEKSIAINGKIVYIGRAATTVPLHLEVLQVRRAQIVGAQGHSG 335

Query: 314 --TWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETS 351
              +P  ++L+ SGKID+  ++T RF      + EA + +
Sbjct: 336 HGIFPSVIKLMASGKIDMTKIITARFPLE--GIMEAIKAA 373

This group resembles the zinc-dependent alcohol dehydrogenase and has the catalytic and structural zinc-binding sites characteristic of this group. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Other MDR members have only a catalytic zinc, and some contain no coordinated zinc. Length = 384

>gnl|CDD|176241 cd08281, liver_ADH_like1, Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase)

 Score =  154 bits (390), Expect = 2e-43
 Identities = 107/356 (30%), Positives = 157/356 (44%), Gaps = 43/356 (12%)

Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
           L I+  EL   GP +VLV++ A G+C SD+  +   R        PM +GHE AGV+ +V
Sbjct: 21  LVIEEVELDPPGPGEVLVKIAAAGLCHSDLSVINGDR----PRPLPMALGHEAAGVVVEV 76

Query: 89  GSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCP----------------EMKFFATP 132
           G  V  L  GD V L    SC  C  C  GR  LC                  ++     
Sbjct: 77  GEGVTDLEVGDHVVLVFVPSCGHCRPCAEGRPALCEPGAAANGAGTLLSGGRRLRLRGGE 136

Query: 133 PVH----GSLANQVVHPADLCFKLPDNVSLEEGAM--CEPLSVGLHACRRANIGPETNVL 186
             H     + A   V       K+  +V LE  A+  C  L+        A + P  +V 
Sbjct: 137 INHHLGVSAFAEYAVVSRRSVVKIDKDVPLEIAALFGCAVLTGVGAVVNTAGVRPGQSVA 196

Query: 187 IMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEK 246
           ++G G +GL  +LGA A GA ++V VD+++ +L++A+ELGA   V            VE+
Sbjct: 197 VVGLGGVGLSALLGAVAAGASQVVAVDLNEDKLALARELGATATVNAGD-----PNAVEQ 251

Query: 247 IQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGH--HEMTVPLTPAAVREVD 304
           +++  G G+D +F+ AG    + TA   TR GG     G+      ++VP       E  
Sbjct: 252 VRELTGGGVDYAFEMAGSVPALETAYEITRRGGTTVTAGLPDPEARLSVPALSLVAEERT 311

Query: 305 VVGVFRYKNTW------PLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARG 354
           + G   Y  +       P  L L  SG++ V  L+THR      E+ E F+  A G
Sbjct: 312 LKG--SYMGSCVPRRDIPRYLALYLSGRLPVDKLLTHRLPLD--EINEGFDRLAAG 363

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to the corresponding carboxylic acid and alcohol. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 371

>gnl|CDD|176202 cd08240, 6_hydroxyhexanoate_dh_like, 6-hydroxyhexanoate dehydrogenase

 Score =  153 bits (389), Expect = 2e-43
 Identities = 98/336 (29%), Positives = 154/336 (45%), Gaps = 28/336 (8%)

Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYL---------KTLRCADFVVKEPMVIGH 79
           L+    + P     +VLV++ A G+C SD+H           KT+   D  VK P+V+GH
Sbjct: 13  LEEVEIDTPKPPGTEVLVKVTACGVCHSDLHIWDGGYDLGGGKTMSLDDRGVKLPLVLGH 72

Query: 80  ECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLA 139
           E  G +  VG +   +  GD+V + P I C  C  C  G  NLC + +        G  A
Sbjct: 73  EIVGEVVAVGPDAADVKVGDKVLVYPWIGCGECPVCLAGDENLCAKGRALGIFQ-DGGYA 131

Query: 140 NQVVHPADLCFKLPDNVSLEEGAMCEPLSVGL---HACRRAN-IGPETNVLIMGAGPIGL 195
             V+ P       P  +     A     S GL    A ++   +  +  V+I+GAG +GL
Sbjct: 132 EYVIVPHSRYLVDPGGLDPALAATL-ACS-GLTAYSAVKKLMPLVADEPVVIIGAGGLGL 189

Query: 196 VTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGI 255
           + +   +A G   I++VD+D+ +L  AK  GAD +V    N  D  +  ++I KA G G+
Sbjct: 190 MALALLKALGPANIIVVDIDEAKLEAAKAAGADVVV----NGSD-PDAAKRIIKAAGGGV 244

Query: 256 DVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVF--RYKN 313
           D   D    + T S A      GGK+ LVG+   E T+PL    +R + + G +    + 
Sbjct: 245 DAVIDFVNNSATASLAFDILAKGGKLVLVGLFGGEATLPLPLLPLRALTIQGSYVGSLEE 304

Query: 314 TWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFE 349
              L + L ++GK+     +T R      +V +A +
Sbjct: 305 LREL-VALAKAGKLK-PIPLTER---PLSDVNDALD 335

6-hydroxyhexanoate dehydrogenase, an enzyme of the zinc-dependent alcohol dehydrogenase-like family of medium chain dehydrogenases/reductases catalyzes the conversion of 6-hydroxyhexanoate and NAD(+) to 6-oxohexanoate + NADH and H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains, at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 350

>gnl|CDD|176204 cd08242, MDR_like, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score =  150 bits (382), Expect = 8e-43
 Identities = 106/347 (30%), Positives = 148/347 (42%), Gaps = 36/347 (10%)

Query: 20  AAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGH 79
           A  L G   L+++    P   P + LVR+   GIC +D+   K           P V GH
Sbjct: 3   ALVLDGGLDLRVEDLPKPEPPPGEALVRVLLAGICNTDLEIYKGYY------PFPGVPGH 56

Query: 80  ECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLA 139
           E  G++E+       LV G RV  E  I+C RC++C+ G Y  CP           G+ A
Sbjct: 57  EFVGIVEEGPEA--ELV-GKRVVGEINIACGRCEYCRRGLYTHCPNRTVLGIVDRDGAFA 113

Query: 140 NQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTML 199
             +  P +    +PD V  E+    EPL+  L    +  I P   V ++G G +GL+   
Sbjct: 114 EYLTLPLENLHVVPDLVPDEQAVFAEPLAAALEILEQVPITPGDKVAVLGDGKLGLLIAQ 173

Query: 200 GARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF 259
                G P +V+V     +L++A+ LG      V T L D AE         G G DV  
Sbjct: 174 VLALTG-PDVVLVGRHSEKLALARRLG------VETVLPDEAESE-------GGGFDVVV 219

Query: 260 DCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAVREVDVV----GVFRYKNTW 315
           +  G    +  AL   R  G V L        +  LT A V E+ +V    G F      
Sbjct: 220 EATGSPSGLELALRLVRPRGTVVLKSTYAGPASFDLTKAVVNEITLVGSRCGPF------ 273

Query: 316 PLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMF 362
              L LLR G +DV PL+T  +     E  EAFE +A  G  +KV+ 
Sbjct: 274 APALRLLRKGLVDVDPLITAVYPLE--EALEAFERAAEPGA-LKVLL 317

This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family, including threonine dehydrogenase. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 319

>gnl|CDD|182229 PRK10083, PRK10083, putative oxidoreductase; Provisional

 Score =  151 bits (382), Expect = 1e-42
 Identities = 95/328 (28%), Positives = 154/328 (46%), Gaps = 21/328 (6%)

Query: 27  NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIE 86
           N+L I+   +P     +V V++K  GICGSD H     R  +   K P VIGHE  GVI+
Sbjct: 10  NSLAIEERPIPQPAAGEVRVKVKLAGICGSDSH---IYRGHNPFAKYPRVIGHEFFGVID 66

Query: 87  KVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVH--GSLANQVVH 144
            VG  V     G+RVA++P ISC  C  C  G+ N+C  +       VH  G  +   V 
Sbjct: 67  AVGEGVDAARIGERVAVDPVISCGHCYPCSIGKPNVCTSLVVLG---VHRDGGFSEYAVV 123

Query: 145 PADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTM-LGARA 203
           PA    ++PD ++ +   M EP ++  +   R     +   LI GAGP+GL  + +    
Sbjct: 124 PAKNAHRIPDAIADQYAVMVEPFTIAANVTGRTGPTEQDVALIYGAGPVGLTIVQVLKGV 183

Query: 204 FGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVS--FDC 261
           +    +++ D  D RL++AKE GAD ++  +   + + E +E+       GI  +   D 
Sbjct: 184 YNVKAVIVADRIDERLALAKESGADWVINNAQ--EPLGEALEE------KGIKPTLIIDA 235

Query: 262 AGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKNTWPLCLEL 321
           A     +  A++      ++ L+G       +       +E+ +       N +P+ ++ 
Sbjct: 236 ACHPSILEEAVTLASPAARIVLMGFSSEPSEIVQQGITGKELSIFSSRLNANKFPVVIDW 295

Query: 322 LRSGKIDVKPLVTHRFGFSQKEVEEAFE 349
           L  G ID + L+TH F F  + V +A E
Sbjct: 296 LSKGLIDPEKLITHTFDF--QHVADAIE 321

Length = 339

>gnl|CDD|176230 cd08269, Zn_ADH9, Alcohol dehydrogenases of the MDR family

 Score =  150 bits (380), Expect = 1e-42
 Identities = 92/334 (27%), Positives = 140/334 (41%), Gaps = 43/334 (12%)

Query: 35  ELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT 94
             P+ GP  VLVR++  G+CGSD+      R       EP   GHE  G +  +G  V+ 
Sbjct: 13  PRPTPGPGQVLVRVEGCGVCGSDLPAFNQGRPWFVYPAEPGGPGHEGWGRVVALGPGVRG 72

Query: 95  LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPD 154
           L  GDRVA   G                             G+ A   +  AD    LP 
Sbjct: 73  LAVGDRVAGLSG-----------------------------GAFAEYDLADADHAVPLPS 103

Query: 155 NVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDV 214
                +    EPL   L+  RR  I     V ++GAG IGL+ +  A A GA R++ +D 
Sbjct: 104 L-LDGQAFPGEPLGCALNVFRRGWIRAGKTVAVIGAGFIGLLFLQLAAAAGARRVIAIDR 162

Query: 215 DDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSA 274
              RL++A+ELGA  +V   +  + I E V ++    G G DV  +  G    +  A   
Sbjct: 163 RPARLALARELGATEVVTDDS--EAIVERVRELTG--GAGADVVIEAVGHQWPLDLAGEL 218

Query: 275 TRAGGKVCLVGMGHHEM-TVPLTPAAVREVDVVG-VFR----YKNTWPLCLELLRSGKID 328
               G++ + G        VP      + +D++  V R            ++L+  G++D
Sbjct: 219 VAERGRLVIFGYHQDGPRPVPFQTWNWKGIDLINAVERDPRIGLEGMREAVKLIADGRLD 278

Query: 329 VKPLVTHRFGFSQKEVEEAFETSARGG-TAIKVM 361
           +  L+TH F    +E+ +AFE + R     IK +
Sbjct: 279 LGSLLTHEFPL--EELGDAFEAARRRPDGFIKGV 310

The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 312

>gnl|CDD|176207 cd08245, CAD, Cinnamyl alcohol dehydrogenases (CAD) and related proteins

 Score =  148 bits (376), Expect = 9e-42
 Identities = 93/337 (27%), Positives = 146/337 (43%), Gaps = 35/337 (10%)

Query: 28  TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEK 87
            L+ +   +P  GP +VL++++A G+C +D+H            K P+V GHE  G + +
Sbjct: 11  PLEPEEVPVPEPGPGEVLIKIEACGVCHTDLH---AAEGDWGGSKYPLVPGHEIVGEVVE 67

Query: 88  VGSEVKTLVPGDRVALEPGI-----SCWRCDHCKGGRYNLCPEMKFFATPPVH-GSLANQ 141
           VG+ V+    GDRV    G+     SC RC++C+ G  NLC +     T     G  A  
Sbjct: 68  VGAGVEGRKVGDRV----GVGWLVGSCGRCEYCRRGLENLCQKAVN--TGYTTQGGYAEY 121

Query: 142 VVHPADLCFKLPDNVSLEEGA--MCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTML 199
           +V  A+    LPD + L + A  +C  ++V   A R A   P   V ++G G +G + + 
Sbjct: 122 MVADAEYTVLLPDGLPLAQAAPLLCAGITV-YSALRDAGPRPGERVAVLGIGGLGHLAVQ 180

Query: 200 GARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF 259
            ARA G    V +     +  +A++LGAD +V         +      Q A G G DV  
Sbjct: 181 YARAMGF-ETVAITRSPDKRELARKLGADEVVD--------SGAELDEQAAAG-GADVIL 230

Query: 260 DCAGFNKTMSTALSATRAGGKVCLVGM-GHHEMTVPLTPAAVREVDVVGVFRYKNTWPLC 318
                      AL   R GG++ LVG+      +  + P  ++   + G           
Sbjct: 231 VTVVSGAAAEAALGGLRRGGRIVLVGLPESPPFSPDIFPLIMKRQSIAGS--THGGRADL 288

Query: 319 LELLR-SGKIDVKPLVTHRFGFSQKEVEEAFETSARG 354
            E L  + +  VKP +   F   Q    EA+E   +G
Sbjct: 289 QEALDFAAEGKVKP-MIETFPLDQ--ANEAYERMEKG 322

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes, or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 330

>gnl|CDD|176257 cd08297, CAD3, Cinnamyl alcohol dehydrogenases (CAD)

 Score =  148 bits (376), Expect = 1e-41
 Identities = 108/352 (30%), Positives = 161/352 (45%), Gaps = 40/352 (11%)

Query: 20  AAWLL--GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADF--VVKEPM 75
           AA +   G    +++   +P  GP +VLV+++A G+C +D+H        D+    K P+
Sbjct: 3   AAVVEEFGEKPYEVKDVPVPEPGPGEVLVKLEASGVCHTDLHAAL----GDWPVKPKLPL 58

Query: 76  VIGHECAGVIEKVGSEVKTLVPGDRVALEPGI-----SCWRCDHCKGGRYNLCPEMKFFA 130
           + GHE AGV+  VG  V  L  GDRV    G+     +C +C++C+ G   LCP  K  +
Sbjct: 59  IGGHEGAGVVVAVGPGVSGLKVGDRV----GVKWLYDACGKCEYCRTGDETLCPNQK-NS 113

Query: 131 TPPVHGSLANQVVHPADLCFKLPDNVSLEEGA--MCEPLSVGLHACRRANIGPETNVLIM 188
              V G+ A   +  A     +PD +S E+ A  +C  ++V   A ++A + P   V+I 
Sbjct: 114 GYTVDGTFAEYAIADARYVTPIPDGLSFEQAAPLLCAGVTV-YKALKKAGLKPGDWVVIS 172

Query: 189 GAGPIGLVTMLG---ARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVE 245
           GAG  G +  LG   A+A G  R++ +DV D +L +AKELGAD  V       D  E V+
Sbjct: 173 GAG--GGLGHLGVQYAKAMGL-RVIAIDVGDEKLELAKELGADAFVDFKK--SDDVEAVK 227

Query: 246 KIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAV--REV 303
           ++    G G       A        AL   R GG +  VG+      +PL P  +  R +
Sbjct: 228 EL--TGGGGAHAVVVTAVSAAAYEQALDYLRPGGTLVCVGLPPGGF-IPLDPFDLVLRGI 284

Query: 304 DVVGVFRYKNTW-PLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARG 354
            +VG            LE    GK  VKP +          + E FE    G
Sbjct: 285 TIVGSLVGTRQDLQEALEFAARGK--VKPHIQ-VVPLED--LNEVFEKMEEG 331

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 341

>gnl|CDD|223677 COG0604, Qor, NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

 Score =  144 bits (364), Expect = 4e-40
 Identities = 97/343 (28%), Positives = 143/343 (41%), Gaps = 49/343 (14%)

Query: 25  GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKE-PMVIGHECAG 83
           G   LK+     P  GP +VLVR+KA G+   DV      +     V+  P + G E AG
Sbjct: 11  GPEVLKVVEVPEPEPGPGEVLVRVKAAGVNPIDV---LVRQGLAPPVRPLPFIPGSEAAG 67

Query: 84  VIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVV 143
           V+  VGS V     GDRVA                                 G  A  VV
Sbjct: 68  VVVAVGSGVTGFKVGDRVA-------------------------ALGGVGRDGGYAEYVV 102

Query: 144 HPADLCFKLPDNVSLEEGA--MCEPLSVGLHACRRANIGPETNVLIMGA-GPIGLVTMLG 200
            PAD    LPD +S EE A      L+  L    RA + P   VL+ GA G +G   +  
Sbjct: 103 VPADWLVPLPDGLSFEEAAALPLAGLTAWLALFDRAGLKPGETVLVHGAAGGVGSAAIQL 162

Query: 201 ARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD 260
           A+A GA  + +V   + +L + KELGAD+++      +D  E+V ++    G G+DV  D
Sbjct: 163 AKALGATVVAVVSSSE-KLELLKELGADHVINYRE--EDFVEQVRELTG--GKGVDVVLD 217

Query: 261 CAGFNKTMSTALSATRAGGKVCLVGM--GHHEMTVPLTPAAVREVDVVGVFRYKNTWPL- 317
             G   T + +L+A   GG++  +G   G   + + L P   + + + GV          
Sbjct: 218 TVG-GDTFAASLAALAPGGRLVSIGALSGGPPVPLNLLPLLGKRLTLRGVTLGSRDPEAL 276

Query: 318 ------CLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARG 354
                   +LL SGK+  KP++   +  ++     A     R 
Sbjct: 277 AEALAELFDLLASGKL--KPVIDRVYPLAEAPAAAAHLLLERR 317

Length = 326

>gnl|CDD|176186 cd05283, CAD1, Cinnamyl alcohol dehydrogenases (CAD)

 Score =  143 bits (362), Expect = 1e-39
 Identities = 94/343 (27%), Positives = 142/343 (41%), Gaps = 53/343 (15%)

Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
           L+   FE   LGP DV +++   G+C SD+H   TLR      K P+V GHE  G++  V
Sbjct: 12  LEPFTFERRPLGPDDVDIKITYCGVCHSDLH---TLRNEWGPTKYPLVPGHEIVGIVVAV 68

Query: 89  GSEVKTLVPGDRVALEPGI-----SCWRCDHCKGGRYNLCPEMKFFATPPV------HGS 137
           GS+V     GDRV    G+     SC  C+ CK G    CP+                G 
Sbjct: 69  GSKVTKFKVGDRV----GVGCQVDSCGTCEQCKSGEEQYCPKGVVTYNGKYPDGTITQGG 124

Query: 138 LANQVVHPADLCFKLPDNVSLEEGA--MC------EPLSVGLHACRRANIGPETNVLIMG 189
            A+ +V      FK+P+ +     A  +C       PL       +R  +GP   V ++G
Sbjct: 125 YADHIVVDERFVFKIPEGLDSAAAAPLLCAGITVYSPL-------KRNGVGPGKRVGVVG 177

Query: 190 AGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQK 249
            G +G + +  A+A GA  +        +   A +LGAD  +          ++ E ++K
Sbjct: 178 IGGLGHLAVKFAKALGA-EVTAFSRSPSKKEDALKLGADEFI--------ATKDPEAMKK 228

Query: 250 AMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVF 309
           A G+ +D+  D    +  +   LS  + GG + LVG     + VP  P       V G  
Sbjct: 229 AAGS-LDLIIDTVSASHDLDPYLSLLKPGGTLVLVGAPEEPLPVPPFPLIFGRKSVAGSL 287

Query: 310 --RYKNTWPLCLELLR-SGKIDVKPLVTHRFGFSQKEVEEAFE 349
               K T     E+L  + +  +KP V          + EA E
Sbjct: 288 IGGRKET----QEMLDFAAEHGIKPWVEV---IPMDGINEALE 323

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 337

>gnl|CDD|176247 cd08287, FDH_like_ADH3, formaldehyde dehydrogenase (FDH)-like

 Score =  140 bits (355), Expect = 1e-38
 Identities = 103/358 (28%), Positives = 167/358 (46%), Gaps = 34/358 (9%)

Query: 20  AAWLLGVNTLKIQPFELPSL-GPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIG 78
           A  + G   ++++    P +  P D ++R+ A  +CGSD+   + +         P  IG
Sbjct: 3   ATVIHGPGDIRVEEVPDPVIEEPTDAVIRVVATCVCGSDLWPYRGVSPTR----APAPIG 58

Query: 79  HECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSL 138
           HE  GV+E+VGSEV ++ PGD V     IS   C  C+ G    C    F+    V G  
Sbjct: 59  HEFVGVVEEVGSEVTSVKPGDFVIAPFAISDGTCPFCRAGFTTSCVHGGFW-GAFVDGGQ 117

Query: 139 ANQVVHP-AD-LCFKLPDNVSLEEG------AMCEPLSVGLHACRRANIGPETNVLIMGA 190
              V  P AD    K+P + S +E       A+ + +  G HA   A + P + V+++G 
Sbjct: 118 GEYVRVPLADGTLVKVPGSPSDDEDLLPSLLALSDVMGTGHHAAVSAGVRPGSTVVVVGD 177

Query: 191 GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKA 250
           G +GL  +L A+  GA RI+ +   + R ++A+E GA +IV      +   E V ++ + 
Sbjct: 178 GAVGLCAVLAAKRLGAERIIAMSRHEDRQALAREFGATDIVA-----ERGEEAVARV-RE 231

Query: 251 M--GTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAVREVDVVG- 307
           +  G G D   +C G  ++M  A++  R GG+V  VG+ H  + + +     R V + G 
Sbjct: 232 LTGGVGADAVLECVGTQESMEQAIAIARPGGRVGYVGVPHGGVELDVRELFFRNVGLAGG 291

Query: 308 ---VFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFET-SARGGTAIKVM 361
              V RY    P  L+ + +G+I+   +          EV E +     R   AIKV+
Sbjct: 292 PAPVRRYL---PELLDDVLAGRINPGRVFDLTLPLD--EVAEGYRAMDER--RAIKVL 342

This group contains proteins identified as alcohol dehydrogenases and glutathione-dependant formaldehyde dehydrogenases (FDH) of the zinc-dependent/medium chain alcohol dehydrogenase family. The MDR family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 345

>gnl|CDD|176227 cd08266, Zn_ADH_like1, Alcohol dehydrogenases of the MDR family

 Score =  139 bits (352), Expect = 3e-38
 Identities = 104/336 (30%), Positives = 148/336 (44%), Gaps = 38/336 (11%)

Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
           L+      P  GP +VLVR+KA  +   D+   + +      +  P ++G + AGV+E V
Sbjct: 15  LEYGDLPEPEPGPDEVLVRVKAAALNHLDLWVRRGMPGIK--LPLPHILGSDGAGVVEAV 72

Query: 89  GSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADL 148
           G  V  + PG RV + PGISC RC++C  GR NLC +        V G  A  V  PA  
Sbjct: 73  GPGVTNVKPGQRVVIYPGISCGRCEYCLAGRENLCAQYGILGE-HVDGGYAEYVAVPARN 131

Query: 149 CFKLPDNVSLEEGAMCEPLSVGLHACR----RANIGPETNVLIMGAGP-IGLVTMLGARA 203
              +PDN+S EE A   PL   L A      RA + P   VL+ GAG  +G   +  A+ 
Sbjct: 132 LLPIPDNLSFEEAA-AAPL-TFLTAWHMLVTRARLRPGETVLVHGAGSGVGSAAIQIAKL 189

Query: 204 FGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAG 263
           FGA  I     +D +L  AKELGAD ++      +D   EV ++      G+DV  +  G
Sbjct: 190 FGATVIATAGSED-KLERAKELGADYVIDYRK--EDFVREVRELTG--KRGVDVVVEHVG 244

Query: 264 FNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAVREV-----DVVGVF-----RYKN 313
              T   +L +   GG++   G      T    P  +R V      ++G           
Sbjct: 245 -AATWEKSLKSLARGGRLVTCG----ATTGYEAPIDLRHVFWRQLSILGSTMGTKAELDE 299

Query: 314 TWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFE 349
                L L+  GK+  KP++   F     E  EA  
Sbjct: 300 A----LRLVFRGKL--KPVIDSVFPLE--EAAEAHR 327

This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 342

>gnl|CDD|219758 pfam08240, ADH_N, Alcohol dehydrogenase GroES-like domain

 Score =  131 bits (333), Expect = 4e-38
 Identities = 50/110 (45%), Positives = 64/110 (58%), Gaps = 4/110 (3%)

Query: 43  DVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVA 102
           +VLVR+KA GICGSD+H  +        VK P+++GHE AG++E+VG  V  L  GDRV 
Sbjct: 3   EVLVRVKAAGICGSDLHIYRG---EPPPVKLPLILGHEGAGIVEEVGPGVTGLKVGDRVV 59

Query: 103 LEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKL 152
           + P I C +C  C+ GR NLCP  KF     + G  A  VV PA     L
Sbjct: 60  VYPLIPCGKCAACREGRENLCPNGKFLGV-HLDGGFAEYVVVPARNLVPL 108

This is the catalytic domain of alcohol dehydrogenases. Many of them contain an inserted zinc binding domain. This domain has a GroES-like structure. Length = 108

>gnl|CDD|176238 cd08277, liver_alcohol_DH_like, Liver alcohol dehydrogenase

 Score =  136 bits (344), Expect = 7e-37
 Identities = 97/370 (26%), Positives = 166/370 (44%), Gaps = 41/370 (11%)

Query: 19  MAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIG 78
             AW  G   L I+  E+      +V ++M A  +C +D+  ++  +   F    P+++G
Sbjct: 6   AVAWEAG-KPLVIEEIEVAPPKANEVRIKMLATSVCHTDILAIEGFKATLF----PVILG 60

Query: 79  HECAGVIEKVGSEVKTLVPGDRVALEPGIS-CWRCDHCKGGRYNLCPEMKFFATP----- 132
           HE AG++E VG  V  L PGD+V +   I  C  C +C+ G+ NLC + +   +      
Sbjct: 61  HEGAGIVESVGEGVTNLKPGDKV-IPLFIGQCGECSNCRSGKTNLCQKYRANESGLMPDG 119

Query: 133 ---------PVH-----GSLANQVVHPADLCFKLPDNVSLEEGA-MCEPLSVGLHAC-RR 176
                     ++      + +   V   +   K+     LE    +    S G  A    
Sbjct: 120 TSRFTCKGKKIYHFLGTSTFSQYTVVDENYVAKIDPAAPLEHVCLLGCGFSTGYGAAWNT 179

Query: 177 ANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTN 236
           A + P + V + G G +GL  ++GA+  GA RI+ VD+++ +   AKE GA + +    N
Sbjct: 180 AKVEPGSTVAVFGLGAVGLSAIMGAKIAGASRIIGVDINEDKFEKAKEFGATDFI----N 235

Query: 237 LQDIAEEV-EKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAG-GKVCLVGMGH--HEMT 292
            +D  + V E I++  G G+D SF+C G    M+ AL +T+ G G   +VG+        
Sbjct: 236 PKDSDKPVSEVIREMTGGGVDYSFECTGNADLMNEALESTKLGWGVSVVVGVPPGAELSI 295

Query: 293 VPLTPAAVREVD--VVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFET 350
            P      R       G F+ ++  P  +    + K D+  L+TH   F  +E+ + F+ 
Sbjct: 296 RPFQLILGRTWKGSFFGGFKSRSDVPKLVSKYMNKKFDLDELITHVLPF--EEINKGFDL 353

Query: 351 SARGGTAIKV 360
             + G  I+ 
Sbjct: 354 -MKSGECIRT 362

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the substrate binding pocket and therefore in substrate specificity. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48) , then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 365

>gnl|CDD|176217 cd08255, 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_like, 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide and other MDR family members

 Score =  128 bits (324), Expect = 9e-35
 Identities = 81/319 (25%), Positives = 123/319 (38%), Gaps = 64/319 (20%)

Query: 60  YLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGR 119
            L+ L      +  P+  G+   G + +VGS V    PGDRV                  
Sbjct: 7   ALEGLSTGTEKLPLPLPPGYSSVGRVVEVGSGVTGFKPGDRVF----------------- 49

Query: 120 YNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANI 179
                           G  A +VV PA+L   LPD +  E  A+    +  L+  R A  
Sbjct: 50  --------------CFGPHAERVVVPANLLVPLPDGLPPERAALTALAATALNGVRDAEP 95

Query: 180 GPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQD 239
                V ++G G +GL+    A+A GA  +V VD D  R  +A+ LG  + V       D
Sbjct: 96  RLGERVAVVGLGLVGLLAAQLAKAAGAREVVGVDPDAARRELAEALGPADPVA-----AD 150

Query: 240 IAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAA 299
            A+E+       G G DV  + +G    + TAL   R  G+V LVG    +  +      
Sbjct: 151 TADEI------GGRGADVVIEASGSPSALETALRLLRDRGRVVLVGWYGLKPLLLGEEFH 204

Query: 300 VREVDVV-----GVFRYKNTWP----------LCLELLRSGKIDVKPLVTHRFGFSQKEV 344
            + + +      G+ RY    P            L+LL  G+++   L+THR  F   + 
Sbjct: 205 FKRLPIRSSQVYGIGRY--DRPRRWTEARNLEEALDLLAEGRLE--ALITHRVPFE--DA 258

Query: 345 EEAFET-SARGGTAIKVMF 362
            EA+          +KV+ 
Sbjct: 259 PEAYRLLFEDPPECLKVVL 277

This subgroup of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family has members identified as 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase and alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 277

>gnl|CDD|176242 cd08282, PFDH_like, Pseudomonas putida aldehyde-dismutating formaldehyde dehydrogenase (PFDH)

 Score =  130 bits (329), Expect = 1e-34
 Identities = 87/295 (29%), Positives = 131/295 (44%), Gaps = 37/295 (12%)

Query: 18  NMAAWLLGVNTLKIQPFELPSL-GPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMV 76
             A    G   + ++    P +  P D +VR+    ICGSD+H  +         +  +V
Sbjct: 1   MKAVVYGGPGNVAVEDVPDPKIEHPTDAIVRITTTAICGSDLHMYR----GRTGAEPGLV 56

Query: 77  IGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEM---------K 127
           +GHE  G +E+VGS V++L  GDRV +   ++C RC +CK G   +C  +          
Sbjct: 57  LGHEAMGEVEEVGSAVESLKVGDRVVVPFNVACGRCRNCKRGLTGVCLTVNPGRAGGAYG 116

Query: 128 FFATPPVHGSLANQVVHP-ADL-CFKLPDNVSLEEGAMCEPLS----VGLHACRRANIGP 181
           +    P  G  A  +  P AD    KLPD    +E      LS     G H    A + P
Sbjct: 117 YVDMGPYGGGQAEYLRVPYADFNLLKLPDRDGAKEKDDYLMLSDIFPTGWHGLELAGVQP 176

Query: 182 ETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIA 241
              V + GAGP+GL+    A   GA R+ +VD    RL +A+ +GA  I     +  D  
Sbjct: 177 GDTVAVFGAGPVGLMAAYSAILRGASRVYVVDHVPERLDLAESIGAIPI-----DFSD-G 230

Query: 242 EEVEKIQKAMGTGIDVSFDCAGF-----------NKTMSTALSATRAGGKVCLVG 285
           + VE+I      G+D + DC G+           N  ++  +  TR GG + +VG
Sbjct: 231 DPVEQILGLEPGGVDRAVDCVGYEARDRGGEAQPNLVLNQLIRVTRPGGGIGIVG 285

Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. PFDH converts 2 molecules of aldehydes to corresponding carboxylic acid and alcohol. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 375

>gnl|CDD|184316 PRK13771, PRK13771, putative alcohol dehydrogenase; Provisional

 Score =  123 bits (310), Expect = 3e-32
 Identities = 87/327 (26%), Positives = 149/327 (45%), Gaps = 27/327 (8%)

Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
            +I+    P  G  +V++++   G+C  D   L  L+     +K P+++GHE  G +E+V
Sbjct: 13  YRIEEVPDPKPGKDEVVIKVNYAGLCYRD---LLQLQGFYPRMKYPVILGHEVVGTVEEV 69

Query: 89  GSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADL 148
           G  VK   PGDRVA         C++C+ G    C     +    + G  A         
Sbjct: 70  GENVKGFKPGDRVASLLYAPDGTCEYCRSGEEAYCKNRLGYGE-ELDGFFAEYAKVKVTS 128

Query: 149 CFKLPDNVSLEEGAMCEP--LSVGLHACRRANIGPETNVLIMGA-GPIGLVTMLGARAFG 205
             K+P NVS +EGA+  P    +     RRA +     VL+ GA G +G+  +  A+A G
Sbjct: 129 LVKVPPNVS-DEGAVIVPCVTGMVYRGLRRAGVKKGETVLVTGAGGGVGIHAIQVAKALG 187

Query: 206 APRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFN 265
           A +++ V   + +  +  +  AD ++  S      +EEV+KI      G D+  +  G  
Sbjct: 188 A-KVIAVTSSESKAKIVSKY-ADYVIVGSK----FSEEVKKIG-----GADIVIETVG-T 235

Query: 266 KTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAV--REVDVVGVFR-YKNTWPLCLELL 322
            T+  +L +   GGK+  +G      T  L    +  ++++++G     K      L+L+
Sbjct: 236 PTLEESLRSLNMGGKIIQIGNVDPSPTYSLRLGYIILKDIEIIGHISATKRDVEEALKLV 295

Query: 323 RSGKIDVKPLVTHRFGFSQKEVEEAFE 349
             GKI  KP++      S  E+++A E
Sbjct: 296 AEGKI--KPVIGAEVSLS--EIDKALE 318

Length = 334

>gnl|CDD|132492 TIGR03451, mycoS_dep_FDH, S-(hydroxymethyl)mycothiol dehydrogenase

 Score =  123 bits (310), Expect = 4e-32
 Identities = 107/358 (29%), Positives = 159/358 (44%), Gaps = 68/358 (18%)

Query: 36  LPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTL 95
           +P  GP +V+V ++A G+C +D+HY +     +F    P ++GHE AGV+E VG  V  +
Sbjct: 21  VPDPGPGEVIVDIQACGVCHTDLHYREGGINDEF----PFLLGHEAAGVVEAVGEGVTDV 76

Query: 96  VPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVH-------------GSLANQV 142
            PGD V L     C +C  CK GR   C +    AT  +              G+ A + 
Sbjct: 77  APGDYVVLNWRAVCGQCRACKRGRPWYCFD-THNATQKMTLTDGTELSPALGIGAFAEKT 135

Query: 143 VHPADLCFKL-PDNVSLEEGAMCEPLSVGLHACR-RANIGPETN---------VLIMGAG 191
           +  A  C K+ P           +P + GL  C   A +G   N         V ++G G
Sbjct: 136 LVHAGQCTKVDPA---------ADPAAAGLLGCGVMAGLGAAVNTGGVKRGDSVAVIGCG 186

Query: 192 PIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAM 251
            +G   + GA   GA +I+ VD+DD +L  A+E GA + V  S       + VE I+   
Sbjct: 187 GVGDAAIAGAALAGASKIIAVDIDDRKLEWAREFGATHTVNSSGT-----DPVEAIRALT 241

Query: 252 -GTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFR 310
            G G DV  D  G  +T   A  A    G V LVG+   +MT+        E+ ++ VF 
Sbjct: 242 GGFGADVVIDAVGRPETYKQAFYARDLAGTVVLVGVPTPDMTL--------ELPLLDVFG 293

Query: 311 Y----KNTW----------PLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARG 354
                K++W          P+ ++L   G++ +   VT R G     VEEAF+    G
Sbjct: 294 RGGALKSSWYGDCLPERDFPMLVDLYLQGRLPLDAFVTERIGLDD--VEEAFDKMHAG 349

Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione [Cellular processes, Detoxification]. Length = 358

>gnl|CDD|176191 cd05289, MDR_like_2, alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases

 Score =  116 bits (294), Expect = 3e-30
 Identities = 95/356 (26%), Positives = 136/356 (38%), Gaps = 63/356 (17%)

Query: 19  MAAWLL----GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEP 74
           M A  +    G   L++     P  GP +VLV++ A G+   D+   + L  A F +  P
Sbjct: 1   MKAVRIHEYGGPEVLELADVPTPEPGPGEVLVKVHAAGVNPVDLKIREGLLKAAFPLTLP 60

Query: 75  MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPV 134
           ++ GH+ AGV+  VG  V     GD V                           F   P 
Sbjct: 61  LIPGHDVAGVVVAVGPGVTGFKVGDEV---------------------------FGMTPF 93

Query: 135 H--GSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHA----CRRANIGPETNVLIM 188
              G+ A  VV PAD     P N+S EE A   PL  GL A         +     VLI 
Sbjct: 94  TRGGAYAEYVVVPADELALKPANLSFEEAAAL-PL-AGLTAWQALFELGGLKAGQTVLIH 151

Query: 189 GA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKI 247
           GA G +G   +  A+A GA   VI           + LGAD ++  +    + A      
Sbjct: 152 GAAGGVGSFAVQLAKARGA--RVIATASAANADFLRSLGADEVIDYTKGDFERAAAPG-- 207

Query: 248 QKAMGTGIDVSFDCAGFNKTMSTALSATRAGGK-VCLVGMGHHEMTVPLTPAAVREVDVV 306
                 G+D   D  G  +T++ +L+  + GG+ V + G            A  R V   
Sbjct: 208 ------GVDAVLDTVGG-ETLARSLALVKPGGRLVSIAG-----PPPAEQAAKRRGVRAG 255

Query: 307 GVFRYKNTWPL--CLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKV 360
            VF   +   L    EL+ +GK+  +P+V   F     +  EA E    G    KV
Sbjct: 256 FVFVEPDGEQLAELAELVEAGKL--RPVVDRVFPLE--DAAEAHERLESGHARGKV 307

Members identified as zinc-dependent alcohol dehydrogenases and quinone oxidoreductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 309

>gnl|CDD|188504 TIGR03989, Rxyl_3153, oxidoreductase, Rxyl_3153 family

 Score =  117 bits (296), Expect = 6e-30
 Identities = 96/353 (27%), Positives = 158/353 (44%), Gaps = 47/353 (13%)

Query: 31  IQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKE-PMVIGHECAGVIEKVG 89
           ++  EL      +VLV++ A G+C SD H    L   D  +   P++ GHE AGV+ KVG
Sbjct: 16  VEEIELDDPKAGEVLVKLVASGLCHSDEH----LVTGDLPMPRYPILGGHEGAGVVTKVG 71

Query: 90  SEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPE--------MKFFATPPVH------ 135
             V  + PGD V L    +C RC  C  G  NLC               T   H      
Sbjct: 72  PGVTGVKPGDHVVLSFIPACGRCRWCSTGLQNLCDLGAALLTGSQISDGTYRFHADGQDV 131

Query: 136 ------GSLANQVVHPADLCFKLPDNVSLEEGAM---CEPLSVGLHACRRANIGPETNVL 186
                 G+ +   V P     K+ D++ L++  +     P   G  A   A++ P   V+
Sbjct: 132 GQMCLLGTFSEYTVVPEASVVKIDDDIPLDKACLVGCGVPTGWG-SAVNIADVRPGDTVV 190

Query: 187 IMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEK 246
           +MG G +G+  + GA   GA +++ VD  +++   A + GA +          + E V+ 
Sbjct: 191 VMGIGGVGINAVQGAAVAGARKVIAVDPVEFKREQALKFGATHAF------ASMEEAVQL 244

Query: 247 IQKAM-GTGIDVSFDCAGFNK--TMSTALSATRAGGKVCLVGMGHHE---MTVPLTPAAV 300
           +++   G G D +    G      ++ ALSATR GG+V + G+G      + V L    +
Sbjct: 245 VRELTNGQGADKTIITVGEVDGEHIAEALSATRKGGRVVVTGLGPMADVDVKVNLFELTL 304

Query: 301 REVDVVG-VFRYKNT---WPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFE 349
            + ++ G +F   N     P  LEL R+GK+ +  L+T    ++  ++ E ++
Sbjct: 305 LQKELQGTLFGGANPRADIPRLLELYRAGKLKLDELITRT--YTLDQINEGYQ 355

This model describes a clade within the family pfam00107 of zinc-binding dehydrogenases. The family pfam00107 contains class III alcohol dehydrogenases, including enzymes designated S-(hydroxymethyl)glutathione dehydrogenase and NAD/mycothiol-dependent formaldehyde dehydrogenase. Members of the current family occur only in species that contain the very small protein mycofactocin (TIGR03969), a possible cofactor precursor, and radical SAM protein TIGR03962. We name this family for Rxyl_3153, where the lone member of the family co-clusters with these markers in Rubrobacter xylanophilus [Unknown function, Enzymes of unknown specificity]. Length = 369

>gnl|CDD|176261 cd08301, alcohol_DH_plants, Plant alcohol dehydrogenase

 Score =  117 bits (295), Expect = 6e-30
 Identities = 89/344 (25%), Positives = 148/344 (43%), Gaps = 49/344 (14%)

Query: 41  PYDVLVRMKAVGICGSDVHYLK---TLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVP 97
             +V +++    +C +DV++ +         F    P ++GHE AG++E VG  V  L P
Sbjct: 27  AMEVRIKILHTSLCHTDVYFWEAKGQTPL--F----PRILGHEAAGIVESVGEGVTDLKP 80

Query: 98  GDRVALEPGISCWRCDHCKGGRYNLCPEMKF--------------FAT--PPVHGSLANQ 141
           GD V       C  C HCK  + N+C  ++               F+    P++  +   
Sbjct: 81  GDHVLPVFTGECKECRHCKSEKSNMCDLLRINTDRGVMINDGKSRFSINGKPIYHFVGTS 140

Query: 142 ------VVHPADLCFKLPDNVSLEEGAM--CEPLSVGLHACRR-ANIGPETNVLIMGAGP 192
                 VVH   +  K+     L++  +  C  +S GL A    A +   + V I G G 
Sbjct: 141 TFSEYTVVHVGCVA-KINPEAPLDKVCLLSCG-VSTGLGAAWNVAKVKKGSTVAIFGLGA 198

Query: 193 IGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAM- 251
           +GL    GAR  GA RI+ VD++  +   AK+ G    V    N +D  + V+++   M 
Sbjct: 199 VGLAVAEGARIRGASRIIGVDLNPSKFEQAKKFGVTEFV----NPKDHDKPVQEVIAEMT 254

Query: 252 GTGIDVSFDCAGFNKTMSTALSATRAG-GKVCLVGMGHHEMTVPLTPAAV-REVDVVGVF 309
           G G+D SF+C G    M +A      G G   L+G+ H +      P  +     + G  
Sbjct: 255 GGGVDYSFECTGNIDAMISAFECVHDGWGVTVLLGVPHKDAVFSTHPMNLLNGRTLKGTL 314

Query: 310 ----RYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFE 349
               + K   P  +E     +++++  +TH   FS  E+ +AF+
Sbjct: 315 FGGYKPKTDLPNLVEKYMKKELELEKFITHELPFS--EINKAFD 356

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the substrate binding pocket and therefore in substrate specificity. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48) , then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 369

>gnl|CDD|176259 cd08299, alcohol_DH_class_I_II_IV, class I, II, IV alcohol dehydrogenases

 Score =  116 bits (292), Expect = 2e-29
 Identities = 91/338 (26%), Positives = 150/338 (44%), Gaps = 41/338 (12%)

Query: 42  YDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRV 101
           ++V +++ A GIC SD H +        V   P+++GHE AG++E VG  V T+ PGD+V
Sbjct: 33  HEVRIKIVATGICRSDDHVVSGK----LVTPFPVILGHEAAGIVESVGEGVTTVKPGDKV 88

Query: 102 ALEPGISCWRCDHCKGGRYNLCPEMKFFAT---------------PPVH-----GSLANQ 141
                  C +C  C     NLC +                      P+H      + +  
Sbjct: 89  IPLFVPQCGKCRACLNPESNLCLKNDLGKPQGLMQDGTSRFTCKGKPIHHFLGTSTFSEY 148

Query: 142 VVHPADLCFKLPDNVSLEEGAM--CEPLSVGL-HACRRANIGPETNVLIMGAGPIGLVTM 198
            V       K+     LE+  +  C   S G   A   A + P +   + G G +GL  +
Sbjct: 149 TVVDEIAVAKIDAAAPLEKVCLIGCG-FSTGYGAAVNTAKVTPGSTCAVFGLGGVGLSAI 207

Query: 199 LGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEV-EKIQKAMGTGIDV 257
           +G +A GA RI+ VD++  + + AKELGA   +    N QD  + + E + +    G+D 
Sbjct: 208 MGCKAAGASRIIAVDINKDKFAKAKELGATECI----NPQDYKKPIQEVLTEMTDGGVDF 263

Query: 258 SFDCAGFNKTMSTALSATRAGGKVC-LVGMGHHEMTVPLTPAAV---REVD--VVGVFRY 311
           SF+  G   TM  AL++   G  V  +VG+      + + P  +   R     V G ++ 
Sbjct: 264 SFEVIGRLDTMKAALASCHEGYGVSVIVGVPPSSQNLSINPMLLLTGRTWKGAVFGGWKS 323

Query: 312 KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFE 349
           K++ P  +    + K ++ PL+TH   F +  + E F+
Sbjct: 324 KDSVPKLVADYMAKKFNLDPLITHTLPFEK--INEGFD 359

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group includes alcohol dehydrogenases corresponding to mammalian classes I, II, IV. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48) , then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 373

>gnl|CDD|176258 cd08298, CAD2, Cinnamyl alcohol dehydrogenases (CAD)

 Score =  111 bits (280), Expect = 5e-28
 Identities = 80/287 (27%), Positives = 125/287 (43%), Gaps = 35/287 (12%)

Query: 19  MAAWLL------GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVV- 71
           M A +L        N L++    +P  GP +VL++++A G+C +D+H ++     D    
Sbjct: 1   MKAMVLEKPGPIEENPLRLTEVPVPEPGPGEVLIKVEACGVCRTDLHIVE----GDLPPP 56

Query: 72  KEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEP-GISCWRCDHCKGGRYNLCPEMKFFA 130
           K P++ GHE  G +E VG  V     GDRV +   G +C  C +C+ GR NLC   +F  
Sbjct: 57  KLPLIPGHEIVGRVEAVGPGVTRFSVGDRVGVPWLGSTCGECRYCRSGRENLCDNARFTG 116

Query: 131 TPPVHGSLANQVVHPADLCFKLPDNVSLEEGA--MCEPLSVGLHACRRANIGPETNVLIM 188
              V G  A  +V      + +P++   EE A  +C  + +G  A + A + P   + + 
Sbjct: 117 Y-TVDGGYAEYMVADERFAYPIPEDYDDEEAAPLLCAGI-IGYRALKLAGLKPGQRLGLY 174

Query: 189 GAGPIG-LVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKI 247
           G G    L   + AR  GA  +           +A+ELGAD     S +L          
Sbjct: 175 GFGASAHLALQI-ARYQGA-EVFAFTRSGEHQELARELGADW-AGDSDDLPPEP------ 225

Query: 248 QKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVP 294
                  +D +   A     +  AL A + GG+V  V  G H   +P
Sbjct: 226 -------LDAAIIFAPVGALVPAALRAVKKGGRV--VLAGIHMSDIP 263

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 329

>gnl|CDD|176203 cd08241, QOR1, Quinone oxidoreductase (QOR)

 Score =  109 bits (274), Expect = 3e-27
 Identities = 93/341 (27%), Positives = 140/341 (41%), Gaps = 72/341 (21%)

Query: 44  VLVRMKAVGICGSDVHYLKTLRCAD---FVVKEPMVIGHECAGVIEKVGSEVKTLVPGDR 100
           V +R++A G+   D+     L            P V G E AGV+E VG  V     GDR
Sbjct: 30  VRIRVEAAGVNFPDL-----LMIQGKYQVKPPLPFVPGSEVAGVVEAVGEGVTGFKVGDR 84

Query: 101 VALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEE 160
           V                            A     G  A +VV PA   F LPD +S EE
Sbjct: 85  V---------------------------VALTG-QGGFAEEVVVPAAAVFPLPDGLSFEE 116

Query: 161 GAMCEPLS-----VGLHACRRANIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDV 214
            A   P++       L   RRA + P   VL++GA G +GL  +  A+A GA R++    
Sbjct: 117 AA-ALPVTYGTAYHALV--RRARLQPGETVLVLGAAGGVGLAAVQLAKALGA-RVIAAAS 172

Query: 215 DDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAG---FNKTMSTA 271
            + +L++A+ LGAD+++       D+ E V+ +    G G+DV +D  G   F      +
Sbjct: 173 SEEKLALARALGADHVIDYRD--PDLRERVKALTG--GRGVDVVYDPVGGDVFEA----S 224

Query: 272 LSATRAGGKVCLVGM-GHHEMTVPLTPAAVREVDVVGVF----------RYKNTWPLCLE 320
           L +   GG++ ++G        +P     ++ + VVGV+            +       +
Sbjct: 225 LRSLAWGGRLLVIGFASGEIPQIPANLLLLKNISVVGVYWGAYARREPELLRANLAELFD 284

Query: 321 LLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVM 361
           LL  GKI  +P V+  F   Q    EA    A      KV+
Sbjct: 285 LLAEGKI--RPHVSAVFPLEQ--AAEALRALADRKATGKVV 321

QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 323

>gnl|CDD|181842 PRK09422, PRK09422, ethanol-active dehydrogenase/acetaldehyde-active reductase; Provisional

 Score =  109 bits (274), Expect = 4e-27
 Identities = 82/276 (29%), Positives = 141/276 (51%), Gaps = 14/276 (5%)

Query: 35  ELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT 94
            L  L   + LV+M+  G+C +D+H    +   DF  K   ++GHE  G++++VG  V +
Sbjct: 19  TLRPLKHGEALVKMEYCGVCHTDLH----VANGDFGDKTGRILGHEGIGIVKEVGPGVTS 74

Query: 95  LVPGDRVALEPGI-SCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLP 153
           L  GDRV++      C  C++C  GR  LC  +K  A   V G +A Q +  AD   K+P
Sbjct: 75  LKVGDRVSIAWFFEGCGHCEYCTTGRETLCRSVK-NAGYTVDGGMAEQCIVTADYAVKVP 133

Query: 154 DNVSLEEGAMCEPLSVGLH-ACRRANIGPETNVLIMGAGPIG-LVTMLGARAFGAPRIVI 211
           + +   + +      V  + A + + I P   + I GAG +G L        F A +++ 
Sbjct: 134 EGLDPAQASSITCAGVTTYKAIKVSGIKPGQWIAIYGAGGLGNLALQYAKNVFNA-KVIA 192

Query: 212 VDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTA 271
           VD++D +L++AKE+GAD  +  S  ++D+A+ +++        +  +   A FN+    A
Sbjct: 193 VDINDDKLALAKEVGADLTIN-SKRVEDVAKIIQEKTGGAHAAVVTAVAKAAFNQ----A 247

Query: 272 LSATRAGGKVCLVGMGHHEMTVPLTPAAVREVDVVG 307
           + A RAGG+V  VG+    M + +    +  ++VVG
Sbjct: 248 VDAVRAGGRVVAVGLPPESMDLSIPRLVLDGIEVVG 283

Length = 338

>gnl|CDD|176189 cd05286, QOR2, Quinone oxidoreductase (QOR)

 Score =  108 bits (272), Expect = 6e-27
 Identities = 81/267 (30%), Positives = 115/267 (43%), Gaps = 45/267 (16%)

Query: 25  GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGV 84
           G   L+ +   +P  GP +VLVR  A+G+   D ++   L         P V+G E AGV
Sbjct: 10  GPEVLEYEDVPVPEPGPGEVLVRNTAIGVNFIDTYFRSGLYPLPL----PFVLGVEGAGV 65

Query: 85  IEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVH 144
           +E VG  V     GDRVA                          +A PP  G+ A   V 
Sbjct: 66  VEAVGPGVTGFKVGDRVA--------------------------YAGPP--GAYAEYRVV 97

Query: 145 PADLCFKLPDNVSLEEGAMCEPLSVGLHA---CRRA-NIGPETNVLIMG-AGPIGLVTML 199
           PA    KLPD +S E  A    L  GL A    R    + P   VL+   AG +GL+   
Sbjct: 98  PASRLVKLPDGISDETAAAL--LLQGLTAHYLLRETYPVKPGDTVLVHAAAGGVGLLLTQ 155

Query: 200 GARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF 259
            A+A GA  I  V  ++ +  +A+  GAD+++    + +D  E V +I    G G+DV +
Sbjct: 156 WAKALGATVIGTVSSEE-KAELARAAGADHVI-NYRD-EDFVERVREITG--GRGVDVVY 210

Query: 260 DCAGFNKTMSTALSATRAGGKVCLVGM 286
           D  G   T   +L + R  G +   G 
Sbjct: 211 DGVG-KDTFEGSLDSLRPRGTLVSFGN 236

Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone and 1,4-naphthoquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 320

>gnl|CDD|215721 pfam00107, ADH_zinc_N, Zinc-binding dehydrogenase

 Score =  102 bits (257), Expect = 9e-27
 Identities = 45/133 (33%), Positives = 71/133 (53%), Gaps = 6/133 (4%)

Query: 192 PIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAM 251
            +GL  +  A+A GA R++ VD  + +L +AKELGAD+++      +D  E V ++    
Sbjct: 1   GVGLAAVQLAKALGAARVIAVDRSEEKLELAKELGADHVINYRD--EDFVERVRELTG-- 56

Query: 252 GTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGM-GHHEMTVPLTPAAVREVDVVGVFR 310
           G G+DV  DC G   T+  AL   R GG+V +VG+ G   +  PL    ++E+ ++G   
Sbjct: 57  GRGVDVVIDCVGAPATLEQALELLRPGGRVVVVGLPGGAPVPFPLRDLLLKELTILGSLG 116

Query: 311 YK-NTWPLCLELL 322
                +   LELL
Sbjct: 117 GGREEFEEALELL 129

Length = 131

>gnl|CDD|131865 TIGR02818, adh_III_F_hyde, S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase

 Score =  108 bits (271), Expect = 1e-26
 Identities = 101/362 (27%), Positives = 155/362 (42%), Gaps = 43/362 (11%)

Query: 19  MAAWLLGVNTLKIQP--FELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMV 76
             AW  G   LKI+    E+P  G  +VLVR+ A G+C +D     TL  AD     P++
Sbjct: 5   AVAWAAG-QPLKIEEVDVEMPQKG--EVLVRIVATGVCHTDAF---TLSGADPEGVFPVI 58

Query: 77  IGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMK--------- 127
           +GHE AG++E VG  V ++  GD V       C  C  C  G+ NLC  ++         
Sbjct: 59  LGHEGAGIVEAVGEGVTSVKVGDHVIPLYTAECGECKFCLSGKTNLCVAVRETQGKGLMP 118

Query: 128 ------FFATPPVH-----GSLANQVVHPADLCFKLPDNVSLEEGAM--CEPLSVGLHAC 174
                      P++      + +   V P     K+     LEE  +  C  ++ G+ A 
Sbjct: 119 DGTSRFSKDGQPIYHYMGCSTFSEYTVVPEISLAKINPAAPLEEVCLLGCG-VTTGIGAV 177

Query: 175 -RRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKV 233
              A +     V + G G IGL  + GAR   A RI+ +D++  +  +AK+LGA + V  
Sbjct: 178 LNTAKVEEGDTVAVFGLGGIGLSVIQGARMAKASRIIAIDINPAKFELAKKLGATDCVNP 237

Query: 234 STNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTAL-SATRAGGKVCLVGM---GHH 289
           +   + I E + +I      G+D SF+C G    M  AL    +  G+  ++G+   G  
Sbjct: 238 NDYDKPIQEVIVEITDG---GVDYSFECIGNVNVMRAALECCHKGWGESIIIGVAGAGQE 294

Query: 290 EMTVP--LTPAAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEA 347
             T P  L    V      G  + +   P  +E    G+I +   VTH        + EA
Sbjct: 295 ISTRPFQLVTGRVWRGSAFGGVKGRTELPGIVEQYMKGEIALDDFVTHTMPLED--INEA 352

Query: 348 FE 349
           F+
Sbjct: 353 FD 354

The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols [Cellular processes, Detoxification, Energy metabolism, Fermentation]. Length = 368

>gnl|CDD|176237 cd08276, MDR7, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score =  107 bits (270), Expect = 2e-26
 Identities = 101/361 (27%), Positives = 157/361 (43%), Gaps = 48/361 (13%)

Query: 19  MAAWLL----GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDV-----HYLKTLRCADF 69
           M AW L    G++ LK+    +P  GP +VLVR+ AV +   D+      Y         
Sbjct: 1   MKAWRLSGGGGLDNLKLVEEPVPEPGPGEVLVRVHAVSLNYRDLLILNGRYP-------P 53

Query: 70  VVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFF 129
            VK+P++   + AG +  VG  V     GDRV     +  +  +   G       E +  
Sbjct: 54  PVKDPLIPLSDGAGEVVAVGEGVTRFKVGDRV-----VPTFFPNWLDGP---PTAEDEAS 105

Query: 130 AT-PPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHA----CRRANIGPETN 184
           A   P+ G LA  VV P +   + PD++S EE A   P + GL A         + P   
Sbjct: 106 ALGGPIDGVLAEYVVLPEEGLVRAPDHLSFEEAA-TLPCA-GLTAWNALFGLGPLKPGDT 163

Query: 185 VLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEV 244
           VL+ G G + L  +  A+A GA R++     D +L  AK LGAD+++   T   D  EEV
Sbjct: 164 VLVQGTGGVSLFALQFAKAAGA-RVIATSSSDEKLERAKALGADHVINYRTTP-DWGEEV 221

Query: 245 EKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVG-MGHHEMTVPLTPAAVREV 303
            K+    G G+D   +  G   T++ ++ A   GG + L+G +   E  V L P   +  
Sbjct: 222 LKLTG--GRGVDHVVEVGG-PGTLAQSIKAVAPGGVISLIGFLSGFEAPVLLLPLLTKGA 278

Query: 304 DVVGVF---RYKNTWPLCLELLRS-GKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIK 359
            + G+    R          + R+     ++P++   F F  +E +EA+     G    K
Sbjct: 279 TLRGIAVGSR-----AQFEAMNRAIEAHRIRPVIDRVFPF--EEAKEAYRYLESGSHFGK 331

Query: 360 V 360
           V
Sbjct: 332 V 332

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 336

>gnl|CDD|176211 cd08249, enoyl_reductase_like, enoyl_reductase_like

 Score =  107 bits (269), Expect = 2e-26
 Identities = 91/374 (24%), Positives = 132/374 (35%), Gaps = 85/374 (22%)

Query: 20  AAWLLGVNTLKIQPFE--LPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVI 77
           AA L G     +   +  +P  GP +VLV++KAV +   D  +        F+   P ++
Sbjct: 3   AAVLTGPGGGLLVVVDVPVPKPGPDEVLVKVKAVALNPVDWKHQD----YGFIPSYPAIL 58

Query: 78  GHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGS 137
           G + AG + +VGS V     GDRVA              GG  N           P +G+
Sbjct: 59  GCDFAGTVVEVGSGVTRFKVGDRVAG----------FVHGGNPN----------DPRNGA 98

Query: 138 LANQVVHPADLCFKLPDNVSLEEGA------------MCEPLSVGLHACRRANIGPETNV 185
               VV  ADL  K+PDN+S EE A            + + L + L   + +       V
Sbjct: 99  FQEYVVADADLTAKIPDNISFEEAATLPVGLVTAALALFQKLGLPLPPPKPSPASKGKPV 158

Query: 186 LIMGAG-PIGLVTMLGARAFGAPRIVIVDVDDYRLSVA--------KELGADNIV--KVS 234
           LI G    +G + +  A+  G    VI          A        K LGAD +      
Sbjct: 159 LIWGGSSSVGTLAIQLAKLAGYK--VIT--------TASPKNFDLVKSLGADAVFDYHDP 208

Query: 235 TNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVP 294
                    VE I+ A G  +  + DC    ++      A    G   LV +    + VP
Sbjct: 209 D-------VVEDIRAATGGKLRYALDCISTPESAQLCAEALGRSGGGKLVSL----LPVP 257

Query: 295 LTPAAVREVDVVGVFRYKNT-------------WPLCLELLRSGKIDVKPLVTHRFGFSQ 341
                 + V V  V  Y                W    ELL  GK+   P+     G   
Sbjct: 258 EETEPRKGVKVKFVLGYTVFGEIPEDREFGEVFWKYLPELLEEGKLKPHPVRVVEGGLEG 317

Query: 342 KEVEEAFETSARGG 355
             V+E  +   +G 
Sbjct: 318 --VQEGLDLLRKGK 329

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 339

>gnl|CDD|176260 cd08300, alcohol_DH_class_III, class III alcohol dehydrogenases

 Score =  106 bits (268), Expect = 4e-26
 Identities = 92/336 (27%), Positives = 152/336 (45%), Gaps = 40/336 (11%)

Query: 44  VLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVAL 103
           V +++ A G+C +D +   TL  AD     P+++GHE AG++E VG  V ++ PGD V  
Sbjct: 30  VRIKILATGVCHTDAY---TLSGADPEGLFPVILGHEGAGIVESVGEGVTSVKPGDHVIP 86

Query: 104 EPGISCWRCDHCKGGRYNLCPEMKFF----------------ATPPVH----GSLAN-QV 142
                C  C  CK G+ NLC +++                    P  H     + +   V
Sbjct: 87  LYTPECGECKFCKSGKTNLCQKIRATQGKGLMPDGTSRFSCKGKPIYHFMGTSTFSEYTV 146

Query: 143 VHPADLCFKLPDNVSLEEGAM--CEPLSVGLHAC-RRANIGPETNVLIMGAGPIGLVTML 199
           V    +  K+     L++  +  C  ++ G  A    A + P + V + G G +GL  + 
Sbjct: 147 VAEISVA-KINPEAPLDKVCLLGCG-VTTGYGAVLNTAKVEPGSTVAVFGLGAVGLAVIQ 204

Query: 200 GARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF 259
           GA+A GA RI+ +D++  +  +AK+ GA + V    + + I    + + +    G+D +F
Sbjct: 205 GAKAAGASRIIGIDINPDKFELAKKFGATDCVNPKDHDKPI---QQVLVEMTDGGVDYTF 261

Query: 260 DCAGFNKTMSTALSATRAG-GKVCLVGM---GHHEMTVP--LTPAAVREVDVVGVFRYKN 313
           +C G  K M  AL A   G G   ++G+   G    T P  L    V +    G ++ ++
Sbjct: 262 ECIGNVKVMRAALEACHKGWGTSVIIGVAAAGQEISTRPFQLVTGRVWKGTAFGGWKSRS 321

Query: 314 TWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFE 349
             P  +E    GKI V   +TH       E+ EAF+
Sbjct: 322 QVPKLVEDYMKGKIKVDEFITHTMPL--DEINEAFD 355

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 368

>gnl|CDD|176233 cd08272, MDR6, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score =  106 bits (266), Expect = 5e-26
 Identities = 96/352 (27%), Positives = 133/352 (37%), Gaps = 64/352 (18%)

Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
            +++    P  GP  VLVR+ A G+   D    +    A      P ++G + AGV+E V
Sbjct: 15  FELREVPRPQPGPGQVLVRVHASGVNPLDTKIRR--GGAAARPPLPAILGCDVAGVVEAV 72

Query: 89  GSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADL 148
           G  V     GD V    G          GG                 GSLA   V  A L
Sbjct: 73  GEGVTRFRVGDEVYGCAGGL--------GGL---------------QGSLAEYAVVDARL 109

Query: 149 CFKLPDNVSLEEGAMCEPLSVGLHA----CRRANIGPETNVLIM-GAGPIGLVTMLGARA 203
               P N+S+ E A   PL VG+ A      RA +     VLI  GAG +G V +  A+A
Sbjct: 110 LALKPANLSMREAA-ALPL-VGITAWEGLVDRAAVQAGQTVLIHGGAGGVGHVAVQLAKA 167

Query: 204 FGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQD-IAEEVEKIQKAMGTGIDVSFDCA 262
            GA   V       + + A+ LGAD I+     + + +AE         G G DV FD  
Sbjct: 168 AGA--RVYATASSEKAAFARSLGADPIIYYRETVVEYVAEHTG------GRGFDVVFDTV 219

Query: 263 GFNKTMSTALSATRA-GGKVCLVGMGHHEMTVPLTPAAVREVDVVGVF----------RY 311
           G  +T+  +  A    G  V ++G   H     L P + R     GVF          R 
Sbjct: 220 G-GETLDASFEAVALYGRVVSILGGATH----DLAPLSFRNATYSGVFTLLPLLTGEGRA 274

Query: 312 KNTWPL--CLELLRSGKIDVKPLV-THRFGFSQKEVEEAFETSARGGTAIKV 360
            +   L     L+  G++  +PL+    F     E   A      G    K+
Sbjct: 275 HHGEILREAARLVERGQL--RPLLDPRTFPLE--EAAAAHARLESGSARGKI 322

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 326

>gnl|CDD|176215 cd08253, zeta_crystallin, Zeta-crystallin with NADP-dependent quinone reductase activity (QOR)

 Score =  104 bits (263), Expect = 1e-25
 Identities = 92/341 (26%), Positives = 137/341 (40%), Gaps = 59/341 (17%)

Query: 37  PSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKE--PMVIGHECAGVIEKVGSEVKT 94
           P+ GP +VLVR+ A G+   D +    +R   +      P V G + AGV+E VG  V  
Sbjct: 23  PTPGPGEVLVRVHASGVNPVDTY----IRAGAYPGLPPLPYVPGSDGAGVVEAVGEGVDG 78

Query: 95  LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPD 154
           L  GDRV        W  +   G R                G+ A  VV PAD    LPD
Sbjct: 79  LKVGDRV--------WLTNLGWGRR---------------QGTAAEYVVVPADQLVPLPD 115

Query: 155 NVSLEEGAMCEPLSVGLHAC-------RRANIGPETNVLIMG-AGPIGLVTMLGARAFGA 206
            VS E+GA     ++G+ A         RA       VL+ G +G +G   +  AR  GA
Sbjct: 116 GVSFEQGA-----ALGIPALTAYRALFHRAGAKAGETVLVHGGSGAVGHAAVQLARWAGA 170

Query: 207 PRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNK 266
            R++          + ++ GAD +       +D+A+ +       G G+DV  +    N 
Sbjct: 171 -RVIATASSAEGAELVRQAGADAVFNYRA--EDLADRILAATA--GQGVDVIIEVL-ANV 224

Query: 267 TMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKNT---WPLCLE--- 320
            ++  L     GG++ + G G    T+P+ P   +E  + GV  Y  T        E   
Sbjct: 225 NLAKDLDVLAPGGRIVVYGSGGLRGTIPINPLMAKEASIRGVLLYTATPEERAAAAEAIA 284

Query: 321 -LLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKV 360
             L  G +  +P++   +     E   A E    GG   KV
Sbjct: 285 AGLADGAL--RPVIAREYPLE--EAAAAHEAVESGGAIGKV 321

Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 325

>gnl|CDD|176229 cd08268, MDR2, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score =  102 bits (256), Expect = 1e-24
 Identities = 76/284 (26%), Positives = 115/284 (40%), Gaps = 49/284 (17%)

Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDV-----HYLKTLRCADFVVKEPMVIGHECAG 83
           L+I+   +P+ G  +VL+R++A+G+  +D       Y+            P  +G+E AG
Sbjct: 15  LRIEELPVPAPGAGEVLIRVEAIGLNRADAMFRRGAYI-------EPPPLPARLGYEAAG 67

Query: 84  VIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVV 143
           V+E VG+ V     GDRV++ P       D  + G Y                  A   +
Sbjct: 68  VVEAVGAGVTGFAVGDRVSVIP-----AADLGQYGTY------------------AEYAL 104

Query: 144 HPADLCFKLPDNVSLEEGAMC-EPLSV---GLHACRRANIGPETNVLIMGA-GPIGLVTM 198
            PA    KLPD +S  E A            L     A + P  +VLI  A   +GL  +
Sbjct: 105 VPAAAVVKLPDGLSFVEAAALWMQYLTAYGALV--ELAGLRPGDSVLITAASSSVGLAAI 162

Query: 199 LGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVS 258
             A A GA  I      + R      LGA ++  + T+ +D+  EV +I    G G+DV 
Sbjct: 163 QIANAAGATVIATTRTSEKR-DALLALGAAHV--IVTDEEDLVAEVLRI--TGGKGVDVV 217

Query: 259 FDCAGFNKTMSTALSATRAGGKVCLVG-MGHHEMTVPLTPAAVR 301
           FD  G     +    A   GG + + G +       PL  A  +
Sbjct: 218 FDPVG-GPQFAKLADALAPGGTLVVYGALSGEPTPFPLKAALKK 260

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 328

>gnl|CDD|178341 PLN02740, PLN02740, Alcohol dehydrogenase-like

 Score =  102 bits (257), Expect = 1e-24
 Identities = 95/350 (27%), Positives = 152/350 (43%), Gaps = 46/350 (13%)

Query: 40  GPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGD 99
              +V +++    IC +D+   K    A      P ++GHE AG++E VG  V+ L  GD
Sbjct: 34  QKMEVRIKILYTSICHTDLSAWKGENEAQ--RAYPRILGHEAAGIVESVGEGVEDLKAGD 91

Query: 100 RVALEPGISCWRCDHCKGGRYNLCPEM---------------KFFAT----PPVH----G 136
            V       C  C +CK  + NLC                  +F       P  H     
Sbjct: 92  HVIPIFNGECGDCRYCKRDKTNLCETYRVDPFKSVMVNDGKTRFSTKGDGQPIYHFLNTS 151

Query: 137 SLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLH-----ACRRANIGPETNVLIMGAG 191
           +     V  +    K+  N  L++  M   LS G+      A   AN+   ++V I G G
Sbjct: 152 TFTEYTVLDSACVVKIDPNAPLKK--MSL-LSCGVSTGVGAAWNTANVQAGSSVAIFGLG 208

Query: 192 PIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEV-EKIQKA 250
            +GL    GARA GA +I+ VD++  +    KE+G  + +    N +D  + V E+I++ 
Sbjct: 209 AVGLAVAEGARARGASKIIGVDINPEKFEKGKEMGITDFI----NPKDSDKPVHERIREM 264

Query: 251 MGTGIDVSFDCAGFNKTMSTALSATRAG-GKVCLVGMGHHEMTVPLTPAAV---REV--D 304
            G G+D SF+CAG  + +  A  +T  G G   L+G+      +PL P  +   R +   
Sbjct: 265 TGGGVDYSFECAGNVEVLREAFLSTHDGWGLTVLLGIHPTPKMLPLHPMELFDGRSITGS 324

Query: 305 VVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARG 354
           V G F+ K+  P   +    G +++   +TH   F   ++ EAF+    G
Sbjct: 325 VFGDFKGKSQLPNLAKQCMQGVVNLDGFITHELPFE--KINEAFQLLEDG 372

Length = 381

>gnl|CDD|176225 cd08264, Zn_ADH_like2, Alcohol dehydrogenases of the MDR family

 Score =  101 bits (253), Expect = 3e-24
 Identities = 75/241 (31%), Positives = 111/241 (46%), Gaps = 29/241 (12%)

Query: 19  MAAWLL---GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPM 75
           M A +    G+  LK++  + P  GP +VL+R+K  G+   D          + V  +PM
Sbjct: 1   MKALVFEKSGIENLKVEDVKDPKPGPGEVLIRVKMAGVNPVD------YNVINAVKVKPM 54

Query: 76  --VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPP 133
             + G E AGV+E+VG  VK +  GDRV +   +    CD C  G   LC          
Sbjct: 55  PHIPGAEFAGVVEEVGDHVKGVKKGDRVVVYNRVFDGTCDMCLSGNEMLCRNGGIIGV-V 113

Query: 134 VHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVG----LHACRRANIGPETNVLIMG 189
            +G  A  +V P    FK+PD++S E  A    L V      HA + A +GP   V++ G
Sbjct: 114 SNGGYAEYIVVPEKNLFKIPDSISDELAA---SLPVAALTAYHALKTAGLGPGETVVVFG 170

Query: 190 A-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQ 248
           A G  G+  +  A+  GA  I +      R    KE GAD +V       ++ E+V++I 
Sbjct: 171 ASGNTGIFAVQLAKMMGAEVIAVS-----RKDWLKEFGADEVVDYD----EVEEKVKEIT 221

Query: 249 K 249
           K
Sbjct: 222 K 222

This group resembles the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase family. However, this subgroup does not contain the characteristic catalytic zinc site. Also, it contains an atypical structural zinc-binding pattern: DxxCxxCxxxxxxxC. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 325

>gnl|CDD|132245 TIGR03201, dearomat_had, 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase

 Score =   99 bits (249), Expect = 1e-23
 Identities = 83/318 (26%), Positives = 147/318 (46%), Gaps = 24/318 (7%)

Query: 34  FELPSLGPYDVLVRMKAVGICGSDV-HYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEV 92
            E+P LG  DV+V++   G+C +D+ +Y   +R        P+ +GHE +G + + G+  
Sbjct: 16  VEIPELGAGDVVVKVAGCGVCHTDLSYYYMGVRT---NHALPLALGHEISGRVIQAGAGA 72

Query: 93  KTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPAD-LCFK 151
            + + G  V +   I C  C+ CK GR  +C   K      + G  A+ +V PA  LC  
Sbjct: 73  ASWI-GKAVIVPAVIPCGECELCKTGRGTICRAQKMPGN-DMQGGFASHIVVPAKGLC-- 128

Query: 152 LPDNVSLEEGAM--------CEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARA 203
           + D   L    +         + ++    A  +A +     V+++GAG +G   +  A+A
Sbjct: 129 VVDEARLAAAGLPLEHVSVVADAVTTPYQAAVQAGLKKGDLVIVIGAGGVGGYMVQTAKA 188

Query: 204 FGAPRIVIVDVDDYRLSVAKELGADNIVKV-STNLQDIAEEVEKIQKAMG---TGIDVSF 259
            GA  +V +D+D  +L + K  GAD  +     + +++ + ++   KA G   TG  + F
Sbjct: 189 MGAA-VVAIDIDPEKLEMMKGFGADLTLNPKDKSAREVKKLIKAFAKARGLRSTGWKI-F 246

Query: 260 DCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFR-YKNTWPLC 318
           +C+G      +ALS    GG + +VG    +    L+         +G +    + +P  
Sbjct: 247 ECSGSKPGQESALSLLSHGGTLVVVGYTMAKTEYRLSNLMAFHARALGNWGCPPDRYPAA 306

Query: 319 LELLRSGKIDVKPLVTHR 336
           L+L+  GKI + P V  R
Sbjct: 307 LDLVLDGKIQLGPFVERR 324

Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA. Length = 349

>gnl|CDD|176228 cd08267, MDR1, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 96.1 bits (240), Expect = 1e-22
 Identities = 84/361 (23%), Positives = 129/361 (35%), Gaps = 63/361 (17%)

Query: 19  MAAWLLG---VNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPM 75
           +     G   V  L      +P+  P +VLV++ A  +   D    +           P 
Sbjct: 1   VVYTRYGSPEVLLLLEVEVPIPTPKPGEVLVKVHAASVNPVDWKLRRGPPKLLLGRPFPP 60

Query: 76  VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVH 135
           + G + AG +  VGS V     GD V                  +   P           
Sbjct: 61  IPGMDFAGEVVAVGSGVTRFKVGDEV------------------FGRLPPKGG------- 95

Query: 136 GSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHAC----RRANIGPETNVLIMGA- 190
           G+LA  VV P     K P+ VS EE A   P++ GL A         + P   VLI GA 
Sbjct: 96  GALAEYVVAPESGLAKKPEGVSFEEAA-ALPVA-GLTALQALRDAGKVKPGQRVLINGAS 153

Query: 191 GPIGLVTMLGARAFGAPRIVIVD----VDDYRLSVAKELGADNIVKVSTNLQDIAEEVEK 246
           G +G   +  A+A GA  +  V      +     + + LGAD ++  +T  +D       
Sbjct: 154 GGVGTFAVQIAKALGA-HVTGVCSTRNAE-----LVRSLGADEVIDYTT--EDFVALTAG 205

Query: 247 IQKAMGTGIDVSFDCAGFNK-TMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAV----- 300
            +K      DV FD  G +  ++  A  A + GG+   VG G   + + L    +     
Sbjct: 206 GEK-----YDVIFDAVGNSPFSLYRASLALKPGGRYVSVGGGPSGLLLVLLLLPLTLGGG 260

Query: 301 -REVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIK 359
            R +                EL+  GK+  KP++   +     +  EA+     G    K
Sbjct: 261 GRRLKFFLAKPNAEDLEQLAELVEEGKL--KPVIDSVYPLE--DAPEAYRRLKSGRARGK 316

Query: 360 V 360
           V
Sbjct: 317 V 317

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 319

>gnl|CDD|176192 cd08230, glucose_DH, Glucose dehydrogenase

 Score = 94.6 bits (236), Expect = 7e-22
 Identities = 73/280 (26%), Positives = 111/280 (39%), Gaps = 32/280 (11%)

Query: 37  PSLGPYDVLVRMKAVGICGSDVHYLKTLRC-----ADFVVKEPMVIGHECAGVIEKVGSE 91
           P   P +VLVR   VG+CG+D   +           DF     +V+GHE  GV+E+VG  
Sbjct: 21  PEPTPGEVLVRTLEVGVCGTDREIVAGEYGTAPPGEDF-----LVLGHEALGVVEEVGDG 75

Query: 92  VKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFF--ATPPVHGSLANQVVHPADLC 149
              L PGD V         +C +C+ GR + C   ++       +HG +    V   +  
Sbjct: 76  -SGLSPGDLVVPTVRRPPGKCLNCRIGRPDFCETGEYTERGIKGLHGFMREYFVDDPEYL 134

Query: 150 FKLPDNVSLEEGAMCEPLSV-------GLHACRRANIGPETNVLIMGAGPIGLVTMLGAR 202
            K+P +++ + G + EPLSV            +R         L++GAGPIGL+  L  R
Sbjct: 135 VKVPPSLA-DVGVLLEPLSVVEKAIEQAEAVQKRLPTWNPRRALVLGAGPIGLLAALLLR 193

Query: 203 AFGAPRIVI--VDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD 260
             G    V+   D  D +  + +ELGA  +     N         K+        D+  +
Sbjct: 194 LRGFEVYVLNRRDPPDPKADIVEELGATYV-----NSSKTPVAEVKLVGEF----DLIIE 244

Query: 261 CAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAV 300
             G       AL A    G V L G+        +    +
Sbjct: 245 ATGVPPLAFEALPALAPNGVVILFGVPGGGREFEVDGGEL 284

Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 355

>gnl|CDD|176256 cd08296, CAD_like, Cinnamyl alcohol dehydrogenases (CAD)

 Score = 93.1 bits (232), Expect = 2e-21
 Identities = 70/257 (27%), Positives = 117/257 (45%), Gaps = 20/257 (7%)

Query: 34  FELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVK 93
            ++P  GP +VL++++A G+C SD         A   +  P V GHE  G I+ VG  V 
Sbjct: 18  RDVPLPGPGEVLIKVEACGVCHSDAF---VKEGAMPGLSYPRVPGHEVVGRIDAVGEGVS 74

Query: 94  TLVPGDRVALE-PGISCWRCDHCKGGRYNLCPEMKFFATPPVH--GSLANQVVHPADLCF 150
               GDRV +   G  C  CD C+ G +  C   K      V   G  A  ++ PA+   
Sbjct: 75  RWKVGDRVGVGWHGGHCGTCDACRRGDFVHCENGKV---TGVTRDGGYAEYMLAPAEALA 131

Query: 151 KLPDNVSLEEGA--MCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPR 208
           ++PD++   E A  +C  ++   +A R +   P   V + G G +G + +  A   G  R
Sbjct: 132 RIPDDLDAAEAAPLLCAGVTT-FNALRNSGAKPGDLVAVQGIGGLGHLAVQYAAKMGF-R 189

Query: 209 IVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTM 268
            V +     +  +A++LGA     + T+ +D+AE +    + +G G  +    A   K +
Sbjct: 190 TVAISRGSDKADLARKLGAH--HYIDTSKEDVAEAL----QELG-GAKLILATAPNAKAI 242

Query: 269 STALSATRAGGKVCLVG 285
           S  +      GK+ ++G
Sbjct: 243 SALVGGLAPRGKLLILG 259

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADHs), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 333

>gnl|CDD|234025 TIGR02819, fdhA_non_GSH, formaldehyde dehydrogenase, glutathione-independent

 Score = 91.5 bits (227), Expect = 2e-20
 Identities = 82/307 (26%), Positives = 138/307 (44%), Gaps = 47/307 (15%)

Query: 18  NMAAWLLGVNTLKIQPFELPSLGPYD-------VLVRMKAVGICGSDVHYLKTLRCADFV 70
           N     LG   +++Q  + P L   D       V++++    ICGSD H ++    A   
Sbjct: 3   NRGVVYLGPGKVEVQDIDYPKLELPDGRKCEHGVILKVVTTNICGSDQHMVRGRTTA--- 59

Query: 71  VKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLC----PEM 126
               +V+GHE  G + + G +V+ +  GD V++   I+C RC +CK G   +C    P  
Sbjct: 60  -PTGLVLGHEITGEVIEKGRDVEFIKIGDIVSVPFNIACGRCRNCKEGHTGVCLNVNPAR 118

Query: 127 KFFATPPVH-----GSLANQVVHP-ADL-CFKLPD-NVSLEE----GAMCEPLSVGLHAC 174
              A   V      G  +  V+ P AD    K PD + +LE+      + +    G H  
Sbjct: 119 AGAAYGYVDMGGWVGGQSEYVMVPYADFNLLKFPDRDQALEKIRDLTMLSDIFPTGYHGA 178

Query: 175 RRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVS 234
             A +GP + V I GAGP+GL     A+  GA  +++ D++  RL+ A+  G + +    
Sbjct: 179 VTAGVGPGSTVYIAGAGPVGLAAAASAQLLGAAVVIVGDLNPARLAQARSFGCETV---- 234

Query: 235 TNLQDIAEEVEKIQKAMGT-GIDVSFDCAGFNK--------------TMSTALSATRAGG 279
            +L   A   E+I++ +G   +D + DC GF                 +++ +  TR GG
Sbjct: 235 -DLSKDATLPEQIEQILGEPEVDCAVDCVGFEARGHGHDGKKEAPATVLNSLMEVTRVGG 293

Query: 280 KVCLVGM 286
            + + G+
Sbjct: 294 AIGIPGL 300

Members of this family represent a distinct clade within the larger family of zinc-dependent dehydrogenases of medium chain alcohols, a family that also includes the so-called glutathione-dependent formaldehyde dehydrogenase. Members of this protein family have a tightly bound NAD that can act as a true cofactor, rather than a cosubstrate in dehydrogenase reactions, in dismutase reactions for some aldehydes. The name given to this family, however, is formaldehyde dehydrogenase, glutathione-independent [Central intermediary metabolism, One-carbon metabolism]. Length = 393

>gnl|CDD|176180 cd05276, p53_inducible_oxidoreductase, PIG3 p53-inducible quinone oxidoreductase

 Score = 90.6 bits (226), Expect = 2e-20
 Identities = 75/280 (26%), Positives = 113/280 (40%), Gaps = 69/280 (24%)

Query: 25  GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDV-----HYLKTLRCADFVVKEPM---- 75
           G   L++     P+ GP +VL+R+ A G+  +D+      Y             P     
Sbjct: 11  GPEVLELGEVPKPAPGPGEVLIRVAAAGVNRADLLQRQGLY-------------PPPPGA 57

Query: 76  --VIGHECAGVIEKVGSEVKTLVPGDRV-ALEPGISCWRCDHCKGGRYNLCPEMKFFATP 132
             ++G E AGV+  VG  V     GDRV AL  G          GG Y            
Sbjct: 58  SDILGLEVAGVVVAVGPGVTGWKVGDRVCALLAG----------GG-Y------------ 94

Query: 133 PVHGSLANQVVHPADLCFKLPDNVSLEEGA-MCEP-LSVGLHACRRANIGPETNVLIM-G 189
                 A  VV PA     +P+ +SL E A + E   +   +  +   +     VLI  G
Sbjct: 95  ------AEYVVVPAGQLLPVPEGLSLVEAAALPEVFFTAWQNLFQLGGLKAGETVLIHGG 148

Query: 190 AGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQK 249
           A  +G   +  A+A GA  I     ++ +L   + LGAD  V ++   +D AEEV++   
Sbjct: 149 ASGVGTAAIQLAKALGARVIATAGSEE-KLEACRALGAD--VAINYRTEDFAEEVKEATG 205

Query: 250 AMGTGIDVSFDCAG---FNKTMSTALSATRAGGKVCLVGM 286
             G G+DV  D  G     +     L A    G++ L+G+
Sbjct: 206 --GRGVDVILDMVGGDYLARN----LRALAPDGRLVLIGL 239

PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 323

>gnl|CDD|166227 PLN02586, PLN02586, probable cinnamyl alcohol dehydrogenase

 Score = 90.3 bits (224), Expect = 3e-20
 Identities = 75/270 (27%), Positives = 122/270 (45%), Gaps = 27/270 (10%)

Query: 40  GPYDVLVRMKAVGICGSDVHYLKTLRCADF-VVKEPMVIGHECAGVIEKVGSEVKTLVPG 98
           G  DV V++   G+C SD+H +K     ++   + P+V GHE  G++ K+G  VK    G
Sbjct: 36  GDEDVTVKILYCGVCHSDLHTIKN----EWGFTRYPIVPGHEIVGIVTKLGKNVKKFKEG 91

Query: 99  DRVALEPGI---SCWRCDHCKGGRYNLCPEMKFFATPPVH------GSLANQVVHPADLC 149
           DRV +  G+   SC  C+ C     N CP+M F      H      G  ++ +V      
Sbjct: 92  DRVGV--GVIVGSCKSCESCDQDLENYCPKMIFTYNSIGHDGTKNYGGYSDMIVVDQHFV 149

Query: 150 FKLPDNVSLEEGA--MCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAP 207
            + PDN+ L+ GA  +C  ++V           P  ++ + G G +G V +   +AFG  
Sbjct: 150 LRFPDNLPLDAGAPLLCAGITVYSPMKYYGMTEPGKHLGVAGLGGLGHVAVKIGKAFGLK 209

Query: 208 RIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKT 267
             VI    +        LGAD+ + VST+        EK++ A+GT +D   D       
Sbjct: 210 VTVISSSSNKEDEAINRLGADSFL-VSTD-------PEKMKAAIGT-MDYIIDTVSAVHA 260

Query: 268 MSTALSATRAGGKVCLVGMGHHEMTVPLTP 297
           +   L   +  GK+  +G+    + +P+ P
Sbjct: 261 LGPLLGLLKVNGKLITLGLPEKPLELPIFP 290

Length = 360

>gnl|CDD|176645 cd05282, ETR_like, 2-enoyl thioester reductase-like

 Score = 89.6 bits (223), Expect = 3e-20
 Identities = 84/355 (23%), Positives = 133/355 (37%), Gaps = 65/355 (18%)

Query: 28  TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEK 87
            L++    +P  GP +VLVRM A  I  SD+  +            P V G+E  GV+ +
Sbjct: 13  VLELVSLPIPPPGPGEVLVRMLAAPINPSDLITISGA--YGSRPPLPAVPGNEGVGVVVE 70

Query: 88  VGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPAD 147
           VGS V  L+ G RV    G   W+                              VV PAD
Sbjct: 71  VGSGVSGLLVGQRVLPLGGEGTWQ----------------------------EYVVAPAD 102

Query: 148 LCFKLPDNVSLEEGAMC--EPLSVGLHACRRANIGPETNVLIMGAGP------IGLVTML 199
               +PD++S E+ AM    PL+  L       + P   V+   A        I L  +L
Sbjct: 103 DLIPVPDSISDEQAAMLYINPLTAWLMLTEYLKLPPGDWVIQNAANSAVGRMLIQLAKLL 162

Query: 200 GARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF 259
           G +      I +V  D+    + K LGAD ++  S    D+A+ V++     G G  ++ 
Sbjct: 163 GFKT-----INVVRRDEQVEEL-KALGADEVIDSSPE--DLAQRVKEATG--GAGARLAL 212

Query: 260 DCAGFNKTMSTALSATRAGGKVCLVG-MGHHEMTVPLTPAAVREVDVVGVF-------RY 311
           D  G     +    + R GG +   G +    +  P +    +++ V G +         
Sbjct: 213 DAVGGESA-TRLARSLRPGGTLVNYGLLSGEPVPFPRSVFIFKDITVRGFWLRQWLHSAT 271

Query: 312 KNTWPLCLE----LLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMF 362
           K            L+ +G +     V  +F     + EEA   + + G   KV+ 
Sbjct: 272 KEAKQETFAEVIKLVEAGVL--TTPVGAKFPLE--DFEEAVAAAEQPGRGGKVLL 322

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 323

>gnl|CDD|215442 PLN02827, PLN02827, Alcohol dehydrogenase-like

 Score = 88.0 bits (218), Expect = 2e-19
 Identities = 91/368 (24%), Positives = 155/368 (42%), Gaps = 62/368 (16%)

Query: 21  AWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHE 80
           AW  G   L ++  E+    P ++ +++ +  +C SD+   ++   A F    P + GHE
Sbjct: 18  AWGAG-EALVMEEVEVSPPQPLEIRIKVVSTSLCRSDLSAWESQ--ALF----PRIFGHE 70

Query: 81  CAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEM-------------- 126
            +G++E +G  V     GD V       C  C HC  G+ N+C  +              
Sbjct: 71  ASGIVESIGEGVTEFEKGDHVLTVFTGECGSCRHCISGKSNMCQVLGLERKGVMHSDQKT 130

Query: 127 --KFFATPPVH----GSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHAC-RRAN 178
                  P  H     S +   V  +    K+     L +  +    ++ GL A    A+
Sbjct: 131 RFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVDPLAPLHKICLLSCGVAAGLGAAWNVAD 190

Query: 179 IGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQ 238
           +   ++V+I G G +GL    GA+  GA +I+ VD++  +   AK  G  + +    N  
Sbjct: 191 VSKGSSVVIFGLGTVGLSVAQGAKLRGASQIIGVDINPEKAEKAKTFGVTDFI----NPN 246

Query: 239 DIAEEVEKIQKAM-GTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPL-T 296
           D++E ++++ K M G G D SF+C G     +TAL +       C  G G   +TV L  
Sbjct: 247 DLSEPIQQVIKRMTGGGADYSFECVGDTGIATTALQS-------CSDGWG---LTVTLGV 296

Query: 297 PAAVREVD---------------VVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQ 341
           P A  EV                + G ++ K+  P  ++   + +I +   +TH   F  
Sbjct: 297 PKAKPEVSAHYGLFLSGRTLKGSLFGGWKPKSDLPSLVDKYMNKEIMIDEFITHNLSFD- 355

Query: 342 KEVEEAFE 349
            E+ +AFE
Sbjct: 356 -EINKAFE 362

Length = 378

>gnl|CDD|176179 cd05195, enoyl_red, enoyl reductase of polyketide synthase

 Score = 84.9 bits (211), Expect = 1e-18
 Identities = 75/334 (22%), Positives = 123/334 (36%), Gaps = 60/334 (17%)

Query: 43  DVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVA 102
           +V V +KA G+   DV     L     +  +   +G EC+G++ +VGS V  L  GDRV 
Sbjct: 2   EVEVEVKAAGLNFRDV-----LVALGLLPGDETPLGLECSGIVTRVGSGVTGLKVGDRVM 56

Query: 103 LEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGA 162
              G++                           G+ A  V   A L  K+PD++S EE A
Sbjct: 57  ---GLA--------------------------PGAFATHVRVDARLVVKIPDSLSFEEAA 87

Query: 163 -MCEPLSVGLHA-CRRANIGPETNVLIM-GAGPIGLVTMLGARAFGAPRIVIVDVDDYRL 219
            +        +A    A +    +VLI   AG +G   +  A+  GA     V  ++ R 
Sbjct: 88  TLPVAYLTAYYALVDLARLQKGESVLIHAAAGGVGQAAIQLAQHLGAEVFATVGSEEKRE 147

Query: 220 SVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGG 279
            + +  G  + +  S +L   A+ + +     G G+DV  +     + +  +       G
Sbjct: 148 FLRELGGPVDHIFSSRDL-SFADGILRATG--GRGVDVVLNSLS-GELLRASWRCLAPFG 203

Query: 280 KVCLVGMGHH--------EMTVPLTPAAVREVDVVGVF-----RYKNTWPLCLELLRSGK 326
           +   V +G           M   L   +   VD+  +        +      LELL +G 
Sbjct: 204 R--FVEIGKRDILSNSKLGMRPFLRNVSFSSVDLDQLARERPELLRELLREVLELLEAGV 261

Query: 327 IDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKV 360
           +  KPL       +     +AF     G    KV
Sbjct: 262 L--KPLPPTVVPSA--SEIDAFRLMQSGKHIGKV 291

Putative enoyl reductase of polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains, at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 293

>gnl|CDD|176236 cd08275, MDR3, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 82.2 bits (204), Expect = 1e-17
 Identities = 78/287 (27%), Positives = 110/287 (38%), Gaps = 62/287 (21%)

Query: 21  AWLL----GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDV-----HYLKTLRCADFVV 71
           A +L    G++ LK++   LP     +V VR++A G+  +D+      Y           
Sbjct: 2   AVVLTGFGGLDKLKVEKEALPEPSSGEVRVRVEACGLNFADLMARQGLYDSA-------P 54

Query: 72  KEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFAT 131
           K P V G ECAG +E VG  VK    GDRV     +   R                    
Sbjct: 55  KPPFVPGFECAGTVEAVGEGVKDFKVGDRV-----MGLTRF------------------- 90

Query: 132 PPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHA----CRRANIGPETNVLI 187
               G  A  V  PAD  F LPD +S EE A        L A        N+ P  +VL+
Sbjct: 91  ----GGYAEVVNVPADQVFPLPDGMSFEEAAAF--PVNYLTAYYALFELGNLRPGQSVLV 144

Query: 188 -MGAGPIGLVTMLGARAFGAPRIVIV-DVDDYRLSVAKELGADNIVKVSTNLQDIAEEVE 245
              AG +GL    G      P + +V      +    KE G  +++   T  QD  EEV+
Sbjct: 145 HSAAGGVGL--AAGQLCKTVPNVTVVGTASASKHEALKENGVTHVIDYRT--QDYVEEVK 200

Query: 246 KIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMT 292
           KI      G+D+  D  G  +    +    +  G+  LV  G   + 
Sbjct: 201 KIS---PEGVDIVLDALG-GEDTRKSYDLLKPMGR--LVVYGAANLV 241

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 337

>gnl|CDD|176200 cd08238, sorbose_phosphate_red, L-sorbose-1-phosphate reductase

 Score = 82.5 bits (204), Expect = 2e-17
 Identities = 64/232 (27%), Positives = 100/232 (43%), Gaps = 40/232 (17%)

Query: 20  AAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKT----LRCADFVVKEPM 75
           A  + G   L+++ FELP +   ++LVR+ +  +C S            +  + + KEP+
Sbjct: 5   AWRMYGKGDLRLEKFELPEIADDEILVRVISDSLCFSTWKLALQGSDHKKVPNDLAKEPV 64

Query: 76  VIGHECAGVIEKVGSEVK-TLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPV 134
           ++GHE AG I KVG + +    PG R  ++P +       C G  Y              
Sbjct: 65  ILGHEFAGTILKVGKKWQGKYKPGQRFVIQPALILPDGPSCPGYSYTYP----------- 113

Query: 135 HGSLANQVVHPADL----CFKLPDNVSLEEGAMCEPLS--VG-LHACRRANIG------- 180
            G LA   + P ++    C  + +     E ++ EPLS  +G   A      G       
Sbjct: 114 -GGLATYHIIPNEVMEQDCLLIYEGDGYAEASLVEPLSCVIGAYTANYHLQPGEYRHRMG 172

Query: 181 --PETNVLIMG-AGPIGLVTMLGARAFGAP----RIVIVDVDDYRLSVAKEL 225
             P  N  I+G AGP+GL  M    A   P     +V+ DV+D RL+ A+ L
Sbjct: 173 IKPGGNTAILGGAGPMGL--MAIDYAIHGPIGPSLLVVTDVNDERLARAQRL 222

L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 410

>gnl|CDD|234027 TIGR02824, quinone_pig3, putative NAD(P)H quinone oxidoreductase, PIG3 family

 Score = 79.6 bits (197), Expect = 1e-16
 Identities = 84/368 (22%), Positives = 133/368 (36%), Gaps = 95/368 (25%)

Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDV-----HYLKTLRCADFVVKEPM------VI 77
           L +    LP     +VL+R+ A G+   D+      Y             P       ++
Sbjct: 15  LVLVEVPLPVPKAGEVLIRVAAAGVNRPDLLQRAGKY-------------PPPPGASDIL 61

Query: 78  GHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGS 137
           G E AG +  VG  V     GDRV          C    GG Y                 
Sbjct: 62  GLEVAGEVVAVGEGVSRWKVGDRV----------CALVAGGGY----------------- 94

Query: 138 LANQVVHPADLCFKLPDNVSLEEGAMCEP---LSVGLHACRRANIGPETNVLIM-GAGPI 193
            A  V  PA     +P+ +SL E A   P    +V  +  +R  +     VLI  GA  I
Sbjct: 95  -AEYVAVPAGQVLPVPEGLSLVEAAAL-PETFFTVWSNLFQRGGLKAGETVLIHGGASGI 152

Query: 194 GLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGT 253
           G   +  A+AFGA        D+ + +  + LGAD  + ++   +D  E V+   +  G 
Sbjct: 153 GTTAIQLAKAFGARVFTTAGSDE-KCAACEALGAD--IAINYREEDFVEVVK--AETGGK 207

Query: 254 GIDVSFDCAG---FNKTMSTALSATRAGGKVCLVG-MGHHEMTVPLTPAAVREVDVVGV- 308
           G+DV  D  G    N+ +     A    G++  +G  G  +  + L P   + + + G  
Sbjct: 208 GVDVILDIVGGSYLNRNI----KALALDGRIVQIGFQGGRKAELDLGPLLAKRLTITGST 263

Query: 309 ---------------FRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSAR 353
                           R ++ WP    LL SG++  +P++   F        +A      
Sbjct: 264 LRARPVAEKAAIAAELR-EHVWP----LLASGRV--RPVIDKVFPLED--AAQAHALMES 314

Query: 354 GGTAIKVM 361
           G    K++
Sbjct: 315 GDHIGKIV 322

Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized [Unknown function, Enzymes of unknown specificity]. Length = 325

>gnl|CDD|176232 cd08271, MDR5, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 77.7 bits (192), Expect = 5e-16
 Identities = 91/348 (26%), Positives = 130/348 (37%), Gaps = 57/348 (16%)

Query: 19  MAAWLL----GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEP 74
           M AW+L        L ++  E+P  G  +VLV++ A G+   D   +     A      P
Sbjct: 1   MKAWVLPKPGAALQLTLEEIEIPGPGAGEVLVKVHAAGLNPVDWKVIAWGPPAW---SYP 57

Query: 75  MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPV 134
            V G + AGV+  VG++V     GDRVA           H    R               
Sbjct: 58  HVPGVDGAGVVVAVGAKVTGWKVGDRVAY----------HASLAR--------------- 92

Query: 135 HGSLANQVVHPADLCFKLPDNVSLEEGAM--CEPLSVGLHAC-RRANIGPETNVLIMGA- 190
            GS A   V  A     LPD++S EE A   C        A  ++  I     +LI G  
Sbjct: 93  GGSFAEYTVVDARAVLPLPDSLSFEEAAALPC-AGLTAYQALFKKLRIEAGRTILITGGA 151

Query: 191 GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKA 250
           G +G   +  A+  G    VI           K LGAD    +  N +D+ E +++I   
Sbjct: 152 GGVGSFAVQLAKRAGL--RVITTCSKRNFEYVKSLGAD--HVIDYNDEDVCERIKEITG- 206

Query: 251 MGTGIDVSFDCAGFNKTMSTALSATRA--GGKVCLVGMGHHEMTVPLTPAA-VREVDVVG 307
            G G+D   D  G     + AL+ T A  G  VC+ G        P T A  V EV +  
Sbjct: 207 -GRGVDAVLDTVG--GETAAALAPTLAFNGHLVCIQGRPDASPDPPFTRALSVHEVALGA 263

Query: 308 VFRY--KNTWP-------LCLELLRSGKIDVKPLVTHRFGFSQKEVEE 346
              +     W          LELL +GK++   +    F    + +  
Sbjct: 264 AHDHGDPAAWQDLRYAGEELLELLAAGKLEPLVIEVLPFEQLPEALRA 311

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 325

>gnl|CDD|132409 TIGR03366, HpnZ_proposed, putative phosphonate catabolism associated alcohol dehydrogenase

 Score = 76.4 bits (188), Expect = 7e-16
 Identities = 66/253 (26%), Positives = 99/253 (39%), Gaps = 24/253 (9%)

Query: 76  VIGHECAGVIEKVGSEV------KTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMK-- 127
           V+GHE  G +  +            L  G RV     + C RC  C+ G    C  ++  
Sbjct: 1   VLGHEIVGEVVALRGGFTPADDGVPLRLGQRVVWSVTVPCGRCFRCRRGLPQKCDSLRKY 60

Query: 128 ----FFATPPVHGSLANQVVHPADL-CFKLPDNV--SLEEGAMCEPLSVGLHACRRANIG 180
                 +  P+ G  A     PA      +PD++  ++   A C   +V + A   A   
Sbjct: 61  GHEALDSGWPLSGGYAEHCHLPAGTAIVPVPDDLPDAVAAPAGCATATV-MAALEAAGDL 119

Query: 181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDI 240
               VL++GAG +GL     A A GA R+V  D    R  +A   GA  + +       +
Sbjct: 120 KGRRVLVVGAGMLGLTAAAAAAAAGAARVVAADPSPDRRELALSFGATALAEPEV----L 175

Query: 241 AEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAV 300
           AE    +Q   G G+DV+ + +G    +   L +   GG   L G       V L P  V
Sbjct: 176 AERQGGLQN--GRGVDVALEFSGATAAVRACLESLDVGGTAVLAGSVFPGGPVALDPEQV 233

Query: 301 --REVDVVGVFRY 311
             R + + GV  Y
Sbjct: 234 VRRWLTIRGVHNY 246

This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds. Length = 280

>gnl|CDD|176210 cd08248, RTN4I1, Human Reticulon 4 Interacting Protein 1

 Score = 75.0 bits (185), Expect = 5e-15
 Identities = 88/373 (23%), Positives = 127/373 (34%), Gaps = 105/373 (28%)

Query: 41  PYDVLVRMKAVGICGSDV--------HYLKTLRCADFVVKE----PMVIGHECAGVIEKV 88
           P  VL+++ A  +   DV          L   R            P+ +G +C+GV+  +
Sbjct: 29  PNQVLIKVHAASVNPIDVLMRSGYGRTLLNKKRKPQSCKYSGIEFPLTLGRDCSGVVVDI 88

Query: 89  GSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVH-GSLANQVVHPAD 147
           GS VK+   GD V                            A PP   G+ A  VV P +
Sbjct: 89  GSGVKSFEIGDEVWG--------------------------AVPPWSQGTHAEYVVVPEN 122

Query: 148 LCFKLPDNVSLEEGAMCEPLSVGLHAC-------RRANIGPET----NVLIMGA-GPIGL 195
              K P N+S EE A     S+                + P+      VLI+G  G +G 
Sbjct: 123 EVSKKPKNLSHEEAA-----SLPYAGLTAWSALVNVGGLNPKNAAGKRVLILGGSGGVGT 177

Query: 196 VTMLGARAFGAPRIVIV----DVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAM 251
             +   +A+GA   V      D       + K LGAD+++       D   E  + +   
Sbjct: 178 FAIQLLKAWGA--HVTTTCSTDAIP----LVKSLGADDVI-------DYNNEDFEEELTE 224

Query: 252 GTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMT------VP---LTPAAVRE 302
               DV  D  G +     AL   + GG    V +    +       +    L  A    
Sbjct: 225 RGKFDVILDTVGGDTE-KWALKLLKKGGTY--VTLVSPLLKNTDKLGLVGGMLKSAVDLL 281

Query: 303 VDVVGVFRYKNT--W------PLCL----ELLRSGKIDVKPLVTHRFGFSQKEVEEAFE- 349
              V      +   W         L    +L+  GKI  KP++   F F   EV EA+E 
Sbjct: 282 KKNVKSLLKGSHYRWGFFSPSGSALDELAKLVEDGKI--KPVIDKVFPFE--EVPEAYEK 337

Query: 350 ---TSARGGTAIK 359
                ARG T IK
Sbjct: 338 VESGHARGKTVIK 350

Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 350

>gnl|CDD|177834 PLN02178, PLN02178, cinnamyl-alcohol dehydrogenase

 Score = 72.7 bits (178), Expect = 3e-14
 Identities = 69/269 (25%), Positives = 117/269 (43%), Gaps = 24/269 (8%)

Query: 40  GPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGD 99
           G  DV V++   G+C SD+H   T++      + P++ GHE  G+  KVG  V     GD
Sbjct: 30  GENDVTVKILFCGVCHSDLH---TIKNHWGFSRYPIIPGHEIVGIATKVGKNVTKFKEGD 86

Query: 100 RVALEPGI-SCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQ------VVHPADLCFKL 152
           RV +   I SC  C+ C     N CP++ F           NQ      +V        +
Sbjct: 87  RVGVGVIIGSCQSCESCNQDLENYCPKVVFTYNSRSSDGTRNQGGYSDVIVVDHRFVLSI 146

Query: 153 PDNVSLEEGA--MCEPLSVGLHACRRANIGPET--NVLIMGAGPIGLVTMLGARAFGAPR 208
           PD +  + GA  +C  ++V     +   +  E+   + + G G +G + +   +AFG   
Sbjct: 147 PDGLPSDSGAPLLCAGITV-YSPMKYYGMTKESGKRLGVNGLGGLGHIAVKIGKAFGLRV 205

Query: 209 IVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTM 268
            VI    +        LGAD+ + V+T+ Q       K+++A+GT +D   D       +
Sbjct: 206 TVISRSSEKEREAIDRLGADSFL-VTTDSQ-------KMKEAVGT-MDFIIDTVSAEHAL 256

Query: 269 STALSATRAGGKVCLVGMGHHEMTVPLTP 297
               S  +  GK+  +G+    + +P+ P
Sbjct: 257 LPLFSLLKVSGKLVALGLPEKPLDLPIFP 285

Length = 375

>gnl|CDD|166155 PLN02514, PLN02514, cinnamyl-alcohol dehydrogenase

 Score = 70.6 bits (173), Expect = 2e-13
 Identities = 66/262 (25%), Positives = 113/262 (43%), Gaps = 23/262 (8%)

Query: 34  FELPSLGPYDVLVRMKAVGICGSDVHYLKT-LRCADFVVKEPMVIGHECAGVIEKVGSEV 92
           + L   GP DV++++   GIC +D+H +K  L  +++    PMV GHE  G + +VGS+V
Sbjct: 27  YTLRKTGPEDVVIKVIYCGICHTDLHQIKNDLGMSNY----PMVPGHEVVGEVVEVGSDV 82

Query: 93  KTLVPGDRVALEPGI-SCWRCDHCKGGRYNLCPEMKFFAT------PPVHGSLANQVVHP 145
                GD V +   +  C  C  CK      C +  +          P  G  A+ +V  
Sbjct: 83  SKFTVGDIVGVGVIVGCCGECSPCKSDLEQYCNKRIWSYNDVYTDGKPTQGGFASAMVVD 142

Query: 146 ADLCFKLPDNVSLEEGA--MCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARA 203
                K+P+ ++ E+ A  +C  ++V                 I+G G +G + +  A+A
Sbjct: 143 QKFVVKIPEGMAPEQAAPLLCAGVTVYSPLSHFGLKQSGLRGGILGLGGVGHMGVKIAKA 202

Query: 204 FGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAG 263
            G    VI   D  R    + LGAD+ +        ++ +  ++Q+A    +D   D   
Sbjct: 203 MGHHVTVISSSDKKREEALEHLGADDYL--------VSSDAAEMQEA-ADSLDYIIDTVP 253

Query: 264 FNKTMSTALSATRAGGKVCLVG 285
               +   LS  +  GK+ L+G
Sbjct: 254 VFHPLEPYLSLLKLDGKLILMG 275

Length = 357

>gnl|CDD|214840 smart00829, PKS_ER, Enoylreductase

 Score = 69.0 bits (170), Expect = 3e-13
 Identities = 48/171 (28%), Positives = 65/171 (38%), Gaps = 52/171 (30%)

Query: 46  VRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEP 105
           + ++A G+   DV  L  L     +     V+G ECAGV+ +VG  V  L  GDRV    
Sbjct: 1   IEVRAAGLNFRDV--LIALG----LYPGEAVLGGECAGVVTRVGPGVTGLAVGDRVM--- 51

Query: 106 GISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE 165
           G+                            G+ A +VV  A L   +PD  S EE A   
Sbjct: 52  GL--------------------------APGAFATRVVTDARLVVPIPDGWSFEEAA--- 82

Query: 166 PLSV---------GLHACRRANIGPETNVLI-MGAGPIGLVTMLGARAFGA 206
             +V          L     A + P  +VLI   AG +G   +  AR  GA
Sbjct: 83  --TVPVVFLTAYYALV--DLARLRPGESVLIHAAAGGVGQAAIQLARHLGA 129

Enoylreductase in Polyketide synthases. Length = 287

>gnl|CDD|176251 cd08291, ETR_like_1, 2-enoyl thioester reductase (ETR) like proteins, child 1

 Score = 68.4 bits (168), Expect = 6e-13
 Identities = 64/260 (24%), Positives = 106/260 (40%), Gaps = 52/260 (20%)

Query: 11  KEDGEEVNMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFV 70
           +E G+ +        V  L +   E+P  GP +VL++++A  I  SD+ +LK        
Sbjct: 7   EEYGKPLE-------VKELSLPEPEVPEPGPGEVLIKVEAAPINPSDLGFLKGQ--YGST 57

Query: 71  VKEPMVIGHECAGVIEKVGSEV--KTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKF 128
              P+  G E +G +   G     ++L+ G RVA               G Y        
Sbjct: 58  KALPVPPGFEGSGTVVAAGGGPLAQSLI-GKRVA------------FLAGSY-------- 96

Query: 129 FATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMC--EPLSV-GLHACRRANIGPETNV 185
                  G+ A   V  A  C  LPD VS E+GA     PL+  G+    R   G +  V
Sbjct: 97  -------GTYAEYAVADAQQCLPLPDGVSFEQGASSFVNPLTALGMLETAREE-GAKAVV 148

Query: 186 LIMGAGPIGLVTML--GARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEE 243
               A  +G   ML    +A G   I IV   +  + + K++GA+ +  ++++  D  E+
Sbjct: 149 HTAAASALG--RMLVRLCKADGIKVINIVRRKEQ-VDLLKKIGAEYV--LNSSDPDFLED 203

Query: 244 VEKIQKAMGTGIDVSFDCAG 263
           ++++         + FD  G
Sbjct: 204 LKELIAK--LNATIFFDAVG 221

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers, with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 324

>gnl|CDD|131869 TIGR02822, adh_fam_2, zinc-binding alcohol dehydrogenase family protein

 Score = 68.4 bits (167), Expect = 6e-13
 Identities = 59/201 (29%), Positives = 90/201 (44%), Gaps = 19/201 (9%)

Query: 35  ELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVI-GHECAGVIEKVGSEVK 93
            +P  GP ++LVR++A G+C +D+H  +     D  V  P V  GHE  G +   G++  
Sbjct: 21  PVPRPGPGELLVRVRACGVCRTDLHVSE----GDLPVHRPRVTPGHEVVGEVAGRGADAG 76

Query: 94  TLVPGDRVALEPGI-----SCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADL 148
               GDRV    GI     +C  C +C+ G  NLCP  ++       G  A     PA  
Sbjct: 77  GFAVGDRV----GIAWLRRTCGVCRYCRRGAENLCPASRYTGW-DTDGGYAEYTTVPAAF 131

Query: 149 CFKLPDNVSLEEGA--MCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGA 206
            ++LP      E A  +C  + +G  A  RA++ P   + + G G    +T   A A GA
Sbjct: 132 AYRLPTGYDDVELAPLLCAGI-IGYRALLRASLPPGGRLGLYGFGGSAHLTAQVALAQGA 190

Query: 207 PRIVIVDVDDYRLSVAKELGA 227
             + ++        +A  LGA
Sbjct: 191 -TVHVMTRGAAARRLALALGA 210

Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). The gene neighborhood of members of this family is not conserved and it appears that no members are characterized. The sequence of the family includes 6 invariant cysteine residues and one invariant histidine. It appears that no member is characterized [Energy metabolism, Fermentation]. Length = 329

>gnl|CDD|173547 PTZ00354, PTZ00354, alcohol dehydrogenase; Provisional

 Score = 67.7 bits (166), Expect = 1e-12
 Identities = 60/249 (24%), Positives = 96/249 (38%), Gaps = 51/249 (20%)

Query: 25  GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDV-----HYLKTLRCADFVVKEPMVIGH 79
           GV+ LKI     P+    DVL+++ A G+  +D       Y      ++       ++G 
Sbjct: 12  GVDVLKIGESPKPAPKRNDVLIKVSAAGVNRADTLQRQGKYPPPPGSSE-------ILGL 64

Query: 80  ECAGVIEKVGSEVKTLVPGDRV-ALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSL 138
           E AG +E VGS+VK    GDRV AL PG                             G  
Sbjct: 65  EVAGYVEDVGSDVKRFKEGDRVMALLPG-----------------------------GGY 95

Query: 139 ANQVVHPADLCFKLPDNVSLEE-GAMCEPLSVGLHACRR-ANIGPETNVLI-MGAGPIGL 195
           A   V        +P   + EE  A+ E         ++  ++    +VLI  GA  +G 
Sbjct: 96  AEYAVAHKGHVMHIPQGYTFEEAAAIPEAFLTAWQLLKKHGDVKKGQSVLIHAGASGVGT 155

Query: 196 VTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMG-TG 254
                A  +GA  I+    ++ ++   K+L A  ++       D      K++K  G  G
Sbjct: 156 AAAQLAEKYGAATIITTSSEE-KVDFCKKLAAIILI----RYPDEEGFAPKVKKLTGEKG 210

Query: 255 IDVSFDCAG 263
           +++  DC G
Sbjct: 211 VNLVLDCVG 219

Length = 334

>gnl|CDD|176234 cd08273, MDR8, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 67.3 bits (165), Expect = 2e-12
 Identities = 85/371 (22%), Positives = 127/371 (34%), Gaps = 88/371 (23%)

Query: 25  GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGV 84
           G   LK+   +LP     +V+V+++A G+  +DV   + L         P   G++  G 
Sbjct: 11  GPEVLKVVEADLPEPAAGEVVVKVEASGVSFADVQMRRGLYP--DQPPLPFTPGYDLVGR 68

Query: 85  IEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVH 144
           ++ +GS V     GDRVA                           A   V G  A  +  
Sbjct: 69  VDALGSGVTGFEVGDRVA---------------------------ALTRV-GGNAEYINL 100

Query: 145 PADLCFKLPDNVSLEEGAMCEPLSV-----GLHACRRANIGPETNVLIMGA-GPIG---- 194
            A     +P+ V   E A+C  L+       LH  R A +     VLI GA G +G    
Sbjct: 101 DAKYLVPVPEGVDAAE-AVCLVLNYVTAYQMLH--RAAKVLTGQRVLIHGASGGVGQALL 157

Query: 195 -LVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGT 253
            L  + GA  +G          +   +  +ELGA       T +    ++        G 
Sbjct: 158 ELALLAGAEVYGT-------ASERNHAALRELGA-------TPIDYRTKDWLPAMLTPG- 202

Query: 254 GIDVSFDCAGFNKTMSTALSATRAGGKVCLVGM-----GHHEMTVPLTPAAV-------- 300
           G+DV FD  G  ++   + +A   GG +   G              L             
Sbjct: 203 GVDVVFDGVGG-ESYEESYAALAPGGTLVCYGGNSSLLQGRRSLAALGSLLARLAKLKLL 261

Query: 301 ---REVDVVGVFRYKNTWP--------LCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFE 349
              R      V+R +   P          L+LL  GKI  +P +  R   S  EV EA  
Sbjct: 262 PTGRRATFYYVWRDRAEDPKLFRQDLTELLDLLAKGKI--RPKIAKRLPLS--EVAEAHR 317

Query: 350 TSARGGTAIKV 360
               G    K+
Sbjct: 318 LLESGKVVGKI 328

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 331

>gnl|CDD|176208 cd08246, crotonyl_coA_red, crotonyl-CoA reductase

 Score = 65.9 bits (161), Expect = 6e-12
 Identities = 53/208 (25%), Positives = 83/208 (39%), Gaps = 15/208 (7%)

Query: 37  PSLGPYDVLVRMKAVGICGSDVHYLKTL------RCADFVVKEPM-VIGHECAGVIEKVG 89
           P LGP +VLV + A G+  ++V                    EP  + G + +G++  VG
Sbjct: 38  PELGPGEVLVAVMAAGVNYNNVWAALGEPVSTFAARQRRGRDEPYHIGGSDASGIVWAVG 97

Query: 90  SEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLC 149
             VK    GD V +   +         GG     P  + +     +GS A   +  A   
Sbjct: 98  EGVKNWKVGDEVVVHCSVWDGNDPERAGGDPMFDPSQRIWGYETNYGSFAQFALVQATQL 157

Query: 150 FKLPDNVSLEEGAMCEPLSVG-----LHACRRANIGPETNVLIMGA-GPIGLVTMLGARA 203
              P ++S EE A    L        L       + P  NVLI GA G +G + +  ARA
Sbjct: 158 MPKPKHLSWEEAA-AYMLVGATAYRMLFGWNPNTVKPGDNVLIWGASGGLGSMAIQLARA 216

Query: 204 FGAPRIVIVDVDDYRLSVAKELGADNIV 231
            GA  + +V   + +    + LGA+ ++
Sbjct: 217 AGANPVAVVS-SEEKAEYCRALGAEGVI 243

Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 393

>gnl|CDD|176199 cd08237, ribitol-5-phosphate_DH, ribitol-5-phosphate dehydrogenase

 Score = 62.4 bits (152), Expect = 8e-11
 Identities = 86/342 (25%), Positives = 144/342 (42%), Gaps = 55/342 (16%)

Query: 43  DVLVRMKAVGICGSDVHYLKTLRCADFVVKE-PMVIGHECAGVIEKVGSEVKTLVPGDRV 101
            V+VR   + IC +D  Y +  R  + + K+ PM + HE  GV+  V     T   G +V
Sbjct: 27  WVIVRPTYLSICHADQRYYQGNRSPEALKKKLPMALIHEGIGVV--VSDPTGTYKVGTKV 84

Query: 102 ALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEG 161
            + P       +  +    N  P  +F ++    G + + V  P D   KLPDNV  E  
Sbjct: 85  VMVPNTPV---EKDEIIPENYLPSSRFRSSG-YDGFMQDYVFLPPDRLVKLPDNVDPEVA 140

Query: 162 AMCEPLSVGLHACRRAN---IGPETNVLIMGAGPIGLVT-MLGARAFGAPRIVIVDVDDY 217
           A  E +SVG+HA  R           + + G G +G +T +L  + +   ++V+      
Sbjct: 141 AFTELVSVGVHAISRFEQIAHKDRNVIGVWGDGNLGYITALLLKQIYPESKLVVFGKHQE 200

Query: 218 RL---SVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMST---A 271
           +L   S A E         +  + DI E++          +D +F+C G   + S     
Sbjct: 201 KLDLFSFADE---------TYLIDDIPEDLA---------VDHAFECVGGRGSQSAINQI 242

Query: 272 LSATRAGGKVCLVGMGHHEMTVPLTPAAVRE--VDVVGVFR-----YKNTWPLCLELL-R 323
           +   R  G + L  MG  E  VP+    V E  + +VG  R     ++      +ELL R
Sbjct: 243 IDYIRPQGTIGL--MGVSEYPVPINTRMVLEKGLTLVGSSRSTREDFERA----VELLSR 296

Query: 324 SGKI--DVKPLVTHRFGFSQ-KEVEEAFE---TSARGGTAIK 359
           + ++   ++ LV   F      ++  AFE   T++ G T ++
Sbjct: 297 NPEVAEYLRKLVGGVFPVRSINDIHRAFESDLTNSWGKTVME 338

NAD-linked ribitol-5-phosphate dehydrogenase, a member of the MDR/zinc-dependent alcohol dehydrogenase-like family, oxidizes the phosphate ester of ribitol-5-phosphate to xylulose-5-phosphate of the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 341

>gnl|CDD|176205 cd08243, quinone_oxidoreductase_like_1, Quinone oxidoreductase (QOR)

 Score = 60.7 bits (148), Expect = 3e-10
 Identities = 68/262 (25%), Positives = 106/262 (40%), Gaps = 39/262 (14%)

Query: 28  TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEK 87
            LK++   +P   P  VL+R+KA G+  S++    T +     VK P V+G E  G +E+
Sbjct: 14  VLKLREIPIPEPKPGWVLIRVKAFGLNRSEIF---TRQGHSPSVKFPRVLGIEAVGEVEE 70

Query: 88  VGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPAD 147
                 T  PG RVA   G                   M         GS A   + P +
Sbjct: 71  APGG--TFTPGQRVATAMG------------------GMGR----TFDGSYAEYTLVPNE 106

Query: 148 LCFKLPDNVSLEE-GAMCEPLSVGLHACRRA-NIGPETNVLIMGA-GPIGLVTMLGARAF 204
             + +  ++S  E  A+ E       +  R+  + P   +LI G    +GL  +  A+A 
Sbjct: 107 QVYAIDSDLSWAELAALPETYYTAWGSLFRSLGLQPGDTLLIRGGTSSVGLAALKLAKAL 166

Query: 205 GAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGF 264
           G   +        R ++ KELGAD +V    +   IAE++         G D   +  G 
Sbjct: 167 G-ATVTATTRSPERAALLKELGADEVV---IDDGAIAEQLRAA----PGGFDKVLELVG- 217

Query: 265 NKTMSTALSATRAGGKVCLVGM 286
             T+  +L   R GG VC+ G+
Sbjct: 218 TATLKDSLRHLRPGGIVCMTGL 239

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 320

>gnl|CDD|188164 TIGR01751, crot-CoA-red, crotonyl-CoA reductase

 Score = 61.0 bits (148), Expect = 3e-10
 Identities = 73/290 (25%), Positives = 109/290 (37%), Gaps = 51/290 (17%)

Query: 36  LPSLGPYDVLVRMKAVGI--------CGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEK 87
           +P LGP +VLV + A G+         G  V     LR    +     +IG + +GV+ +
Sbjct: 32  VPELGPGEVLVAVMAAGVNYNNVWAALGEPVSTFAFLRKYGKLDLPFHIIGSDASGVVWR 91

Query: 88  VGSEVKTLVPGDRVALEPGISCWRCD----HCKGGRYNLCPEMKFFATPPVHGSLANQVV 143
           VG  V     GD V      SC + D      + G   L  E + +      GS A   +
Sbjct: 92  VGPGVTRWKVGDEVV----ASCLQVDLTAPDGRDGDPMLSSEQRIWGYETNFGSFAEFAL 147

Query: 144 HPADLCFKLPDNVSLEEGAMCEPLSVG-----LHACRRANIGPETNVLIMGA-GPIGLVT 197
                    P +++ EE A C  L+       L     A + P  NVLI GA G +G   
Sbjct: 148 VKDYQLMPKPKHLTWEEAA-CPGLTGATAYRQLVGWNPAAVKPGDNVLIWGAAGGLGSYA 206

Query: 198 MLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIA-------------EEV 244
              ARA G   + +V   + +    + LGA+ ++    +  D               +E 
Sbjct: 207 TQLARAGGGNPVAVVSSPE-KAEYCRSLGAEAVI----DRNDFGHWGRLPDHNTQAPKEW 261

Query: 245 EKIQKAMGTGI---------DVSFDCAGFNKTMSTALSATRAGGKVCLVG 285
            K  K  G  I         D+ F+  G   T  T++   R GG V + G
Sbjct: 262 TKSFKRFGKRIRELTGGEDPDIVFEHPG-RATFPTSVYVCRRGGMVVICG 310

The enzyme modelled by This model is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae. Length = 398

>gnl|CDD|176206 cd08244, MDR_enoyl_red, Possible enoyl reductase

 Score = 57.8 bits (140), Expect = 2e-09
 Identities = 74/281 (26%), Positives = 103/281 (36%), Gaps = 45/281 (16%)

Query: 37  PSLGPYDVLVRMKAVGICGSDVHYLKT-LRCA----DFVVKEPMVIGHECAGVIEKVGSE 91
           P  GP  V + + A G     VH++ T LR       F  + P V G E AGV++ VG  
Sbjct: 23  PVPGPGQVRIAVAAAG-----VHFVDTQLRSGWGPGPFPPELPYVPGGEVAGVVDAVGPG 77

Query: 92  VKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFK 151
           V     G RV                             T    G  A   V   D    
Sbjct: 78  VDPAWLGRRVVAH--------------------------TGRAGGGYAELAVADVDSLHP 111

Query: 152 LPDNVSLEEG-AMCEPLSVGLHACRRANIGPETNVLIMGA-GPIGLVTMLGARAFGAPRI 209
           +PD + LE   A+       L     A + P   VL+  A G +G + +  A+A GA  +
Sbjct: 112 VPDGLDLEAAVAVVHDGRTALGLLDLATLTPGDVVLVTAAAGGLGSLLVQLAKAAGA-TV 170

Query: 210 VIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMS 269
           V       + ++ + LGAD  V V     D  ++V   +   G G+ V  D  G      
Sbjct: 171 VGAAGGPAKTALVRALGAD--VAVDYTRPDWPDQVR--EALGGGGVTVVLDGVG-GAIGR 225

Query: 270 TALSATRAGGKVCLVGMGHHEMT-VPLTPAAVREVDVVGVF 309
            AL+    GG+    G    E T +    A  R V VVG+ 
Sbjct: 226 AALALLAPGGRFLTYGWASGEWTALDEDDARRRGVTVVGLL 266

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers, with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 324

>gnl|CDD|176250 cd08290, ETR, 2-enoyl thioester reductase (ETR)

 Score = 57.6 bits (140), Expect = 3e-09
 Identities = 92/362 (25%), Positives = 142/362 (39%), Gaps = 66/362 (18%)

Query: 29  LKIQPFELPSLGPYD-VLVRMKAVGICGSDVH-----YLKTLRCADFVVKEPMVIGHECA 82
           L+++ +E+P  GP + VLV+M A  I  +D++     Y           + P V G+E  
Sbjct: 16  LQLESYEIPPPGPPNEVLVKMLAAPINPADINQIQGVYPIK---PPTTPEPPAVGGNEGV 72

Query: 83  GVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQV 142
           G + KVGS VK+L PGD V                               P  G+     
Sbjct: 73  GEVVKVGSGVKSLKPGDWV---------------------------IPLRPGLGTWRTHA 105

Query: 143 VHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRR-----ANIGPETNVLIMGA-GPIGL- 195
           V PAD   K+P++V  E+ A    LSV      R       + P   V+  GA   +G  
Sbjct: 106 VVPADDLIKVPNDVDPEQAAT---LSVNPCTAYRLLEDFVKLQPGDWVIQNGANSAVGQA 162

Query: 196 VTMLGARAFGAPRI-VIVDVDDYRLSVA--KELGADNIVKVSTNLQDIAEEVEKIQKAMG 252
           V  L A+  G   I V+ D  D        K LGAD+++        +A E+ K   A G
Sbjct: 163 VIQL-AKLLGIKTINVVRDRPDLEELKERLKALGADHVLTEEELRSLLATELLK--SAPG 219

Query: 253 TGIDVSFDCAGFNKTMSTALSATRAGGK-VCLVGMGHHEMTVPLTPAAVREVDVVGVFRY 311
               ++ +C G  K+ +        GG  V   GM    +TVP +    +++ + G +  
Sbjct: 220 GRPKLALNCVG-GKSATELARLLSPGGTMVTYGGMSGQPVTVPTSLLIFKDITLRGFWLT 278

Query: 312 KNT-------WPLCL----ELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKV 360
           +             L    EL+R GK+   P V        +E ++A   + +GG   K 
Sbjct: 279 RWLKRANPEEKEDMLEELAELIREGKL-KAPPVEKVTDDPLEEFKDALANALKGGGGGKQ 337

Query: 361 MF 362
           + 
Sbjct: 338 VL 339

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains, at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers, with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 341

>gnl|CDD|176252 cd08292, ETR_like_2, 2-enoyl thioester reductase (ETR) like proteins, child 2

 Score = 56.6 bits (137), Expect = 5e-09
 Identities = 84/290 (28%), Positives = 107/290 (36%), Gaps = 47/290 (16%)

Query: 26  VNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKE-PMVIGHECAGV 84
            + L+I     P+ G  +VLVR     I   D   L T+R       E P + G E  GV
Sbjct: 13  ADVLEIGEVPKPTPGAGEVLVRTTLSPIHNHD---LWTIRGTYGYKPELPAIGGSEAVGV 69

Query: 85  IEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVH 144
           ++ VG  VK L  G RVA                              PVHG+ A   V 
Sbjct: 70  VDAVGEGVKGLQVGQRVA-------------------------VA---PVHGTWAEYFVA 101

Query: 145 PADLCFKLPDNVSLEEGAM--CEPLSVGLHACRRANIGP-ETNVLIMGAGPIG-LVTMLG 200
           PAD    LPD +S E  A     PLS  L       + P +  +     G +G LV ML 
Sbjct: 102 PADGLVPLPDGISDEVAAQLIAMPLS-ALMLLDFLGVKPGQWLIQNAAGGAVGKLVAML- 159

Query: 201 ARAFGAPRIVIVDVDDYRLSVAKELGADNIVKV-STNLQDIAEEVEKIQKAMGTGIDVSF 259
           A A G   I +V  D        EL A  I  V ST      ++V +   A G  I V+ 
Sbjct: 160 AAARGINVINLVRRDA----GVAELRALGIGPVVSTEQPGWQDKVREA--AGGAPISVAL 213

Query: 260 DCAGFNKTMSTALSATRAGGKVCLVG-MGHHEMTVPLTPAAVREVDVVGV 308
           D  G  K     LS    GG +   G M    M +       ++  V G 
Sbjct: 214 DSVG-GKLAGELLSLLGEGGTLVSFGSMSGEPMQISSGDLIFKQATVRGF 262

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains, at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers, with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 324

>gnl|CDD|176214 cd08252, AL_MDR, Arginate lyase and other MDR family members

 Score = 56.0 bits (136), Expect = 8e-09
 Identities = 24/65 (36%), Positives = 34/65 (52%), Gaps = 3/65 (4%)

Query: 37  PSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLV 96
           P  G  D+LVR++AV +   D    K       V  +P ++G + +GV+E VGSEV    
Sbjct: 26  PVPGGRDLLVRVEAVSVNPVDT---KVRAGGAPVPGQPKILGWDASGVVEAVGSEVTLFK 82

Query: 97  PGDRV 101
            GD V
Sbjct: 83  VGDEV 87

This group contains a structure identified as an arginate lyase. Other members are identified quinone reductases, alginate lyases, and other proteins related to the zinc-dependent dehydrogenases/reductases. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 336

>gnl|CDD|176213 cd08251, polyketide_synthase, polyketide synthase

 Score = 55.1 bits (133), Expect = 2e-08
 Identities = 59/227 (25%), Positives = 89/227 (39%), Gaps = 39/227 (17%)

Query: 35  ELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT 94
           E+   GP +V ++++A  +   D+  ++ L     +   P   G E +GV+  VG  V  
Sbjct: 1   EVAPPGPGEVRIQVRAFSLNFGDLLCVRGLYPT--MPPYPFTPGFEASGVVRAVGPHVTR 58

Query: 95  LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPD 154
           L  GD V    G                   M         G  A  V  P D   + P 
Sbjct: 59  LAVGDEVIAGTG-----------------ESM---------GGHATLVTVPEDQVVRKPA 92

Query: 155 NVSLEEGAMCEPLSVGL---HACRRANIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIV 210
           ++S EE   C    V L    A  RA +    ++LI  A G  GL+ +  AR  GA    
Sbjct: 93  SLSFEEA--CALPVVFLTVIDAFARAGLAKGEHILIQTATGGTGLMAVQLARLKGAEIYA 150

Query: 211 IVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDV 257
               DD +L   K+LG  +++       D  EE+ ++    G G+DV
Sbjct: 151 TASSDD-KLEYLKQLGVPHVINYVEE--DFEEEIMRLTG--GRGVDV 192

Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 303

>gnl|CDD|182701 PRK10754, PRK10754, quinone oxidoreductase, NADPH-dependent; Provisional

 Score = 53.2 bits (128), Expect = 7e-08
 Identities = 66/244 (27%), Positives = 97/244 (39%), Gaps = 42/244 (17%)

Query: 25  GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKT-LRCADFVVKE-PMVIGHECA 82
           G   L+   F        +V V  KA+GI     +Y+ T +R   +     P  +G E A
Sbjct: 12  GPEVLQAVEFTPADPAENEVQVENKAIGI-----NYIDTYIRSGLYPPPSLPSGLGTEAA 66

Query: 83  GVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQV 142
           GV+ KVGS VK +  GDRV                  Y         A   VH   A++ 
Sbjct: 67  GVVSKVGSGVKHIKVGDRVV-----------------YAQSA---LGAYSSVHNVPADKA 106

Query: 143 VHPADLCFKLPDNVSLEEGAMC--EPLSVGLHACRRANIGP-ETNVLIMGAGPIGLVTML 199
                    LPD +S E+ A    + L+V     +   I P E  +    AG +GL+   
Sbjct: 107 A-------ILPDAISFEQAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQ 159

Query: 200 GARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF 259
            A+A GA  I  V     +   AK+ GA  ++      ++I E V++I    G  + V +
Sbjct: 160 WAKALGAKLIGTVGSAQ-KAQRAKKAGAWQVINYRE--ENIVERVKEITG--GKKVRVVY 214

Query: 260 DCAG 263
           D  G
Sbjct: 215 DSVG 218

Length = 327

>gnl|CDD|222256 pfam13602, ADH_zinc_N_2, Zinc-binding dehydrogenase

 Score = 47.8 bits (114), Expect = 6e-07
 Identities = 34/139 (24%), Positives = 50/139 (35%), Gaps = 15/139 (10%)

Query: 225 LGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLV 284
           LGAD ++  +T  +D  E         G G+DV  D  G    +   L+    G  V + 
Sbjct: 1   LGADEVIDYTT--EDFEEATA------GEGVDVVLDTVGGETLLRALLALKPGGRLVSIG 52

Query: 285 GMGHHEMTVPL-TPAAVREVDVVGVFRYKNTWPL--CLELLRSGKIDVKPLVTHRFGFSQ 341
           G               VR V +  V   +    L    EL+ +GK+  +P++   F    
Sbjct: 53  GPDLLLSVAAKAGGRGVRGVFLFPVSPGEAGADLAELAELVEAGKL--RPVIDRVFPLE- 109

Query: 342 KEVEEAFETSARGGTAIKV 360
            E  EA      G    KV
Sbjct: 110 -EAAEAHRYLESGRARGKV 127

Length = 129

>gnl|CDD|176209 cd08247, AST1_like, AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast

 Score = 49.2 bits (118), Expect = 2e-06
 Identities = 65/260 (25%), Positives = 102/260 (39%), Gaps = 63/260 (24%)

Query: 29  LKIQPFELP---SLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVK-EPMVIGHECAGV 84
           L I   +LP        +++V++ A  +   D   LK      F  K +   +G + +GV
Sbjct: 13  LTITTIKLPLPNCYKDNEIVVKVHAAALNPVD---LKLYNSYTFHFKVKEKGLGRDYSGV 69

Query: 85  IEKVGSEVKTLVP-GDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQ-V 142
           I KVGS V +    GD V    GI      H  GG+                G+L+   +
Sbjct: 70  IVKVGSNVASEWKVGDEVC---GIY----PHPYGGQ----------------GTLSQYLL 106

Query: 143 VHPADLCFKL---PDNVSLEEGAMCEPLSVG-----LHACRRANIGPETNVLIMGAGPIG 194
           V P      +   P+N+SLEE A   PL +G     L    +  +GP++ VL++G     
Sbjct: 107 VDPKKDKKSITRKPENISLEEAA-AWPLVLGTAYQILEDLGQ-KLGPDSKVLVLGGS--- 161

Query: 195 LVTMLG------ARAFGAPRIVIVDVDDYRLSVAKELGADNIV-----KVSTNLQDIAEE 243
             T +G      A+       V+         + K+LGAD+ +          L+ + E 
Sbjct: 162 --TSVGRFAIQLAKNHYNIGTVVGTCSSRSAELNKKLGADHFIDYDAHSGVKLLKPVLEN 219

Query: 244 VEKIQKAMGTGIDVSFDCAG 263
           V+   K      D+  DC G
Sbjct: 220 VKGQGK-----FDLILDCVG 234

This group contains members identified in targeting of yeast membrane proteins ATPase. AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast, identified as a multicopy suppressor of pma1 mutants which cause temperature sensitive growth arrest due to the inability of ATPase to target to the cell surface. This family is homologous to the medium chain family of dehydrogenases and reductases. Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 352

>gnl|CDD|130269 TIGR01202, bchC, 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase

 Score = 47.5 bits (113), Expect = 4e-06
 Identities = 72/340 (21%), Positives = 125/340 (36%), Gaps = 61/340 (17%)

Query: 23  LLGVNTLKIQPFELPSLGPYDVLVRMKAVGI-CGSDVHYLKTLRCADFVVKEPMVIGHEC 81
           L G N ++++   L    P D++V +   GI  G++  +   L      +  P+V G+E 
Sbjct: 7   LSGPNQIELREVTLTPPSPGDLVVEIWYSGISTGTEKLFWNGLMPPFPGMGYPLVPGYES 66

Query: 82  AGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQ 141
            G + + G +     PGDRV + PG +C                  +     + G  + +
Sbjct: 67  VGRVVEAGPDTGFR-PGDRVFV-PGSNC------------------YEDVRGLFGGASKR 106

Query: 142 VVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNV---LIMGAGPIGLVTM 198
           +V PA    +L   +    G     L++   A R A  G E  V   LI+G G +G +  
Sbjct: 107 LVTPASRVCRLDPAL----GPQGALLALAATA-RHAVAGAEVKVLPDLIVGHGTLGRLLA 161

Query: 199 LGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKI--QKAMGTGID 256
              +A G     + + +  R                    D A   E +  +K       
Sbjct: 162 RLTKAAGGSPPAVWETNPRRR-------------------DGATGYEVLDPEKDPRRDYR 202

Query: 257 VSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKNTWP 316
             +D +G    + T +     GG++ L G     +     PA ++E       R    W 
Sbjct: 203 AIYDASGDPSLIDTLVRRLAKGGEIVLAGFYTEPVNFDFVPAFMKEAR----LRIAAEWQ 258

Query: 317 -----LCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETS 351
                   EL+ SG + +  L+TH+      +  EA+ T+
Sbjct: 259 PGDLHAVRELIESGALSLDGLITHQ--RPASDAAEAYMTA 296

[Biosynthesis of cofactors, prosthetic groups, and carriers, Chlorophyll and bacteriochlorphyll]. Length = 308

>gnl|CDD|176235 cd08274, MDR9, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 46.9 bits (112), Expect = 8e-06
 Identities = 59/268 (22%), Positives = 96/268 (35%), Gaps = 37/268 (13%)

Query: 37  PSLGPYDVLVRMKAVGI-----------CGSDVHYLKTLRCADFV------VKEPMVIGH 79
           P+  P +VL+R+ A G+             ++V        A         +  P + G 
Sbjct: 24  PTPAPGEVLIRVGACGVNNTDINTREGWYSTEVDGATDSTGAGEAGWWGGTLSFPRIQGA 83

Query: 80  ECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLA 139
           +  G +  VG  V T   G+RV ++P I             +   ++ +  +    G  A
Sbjct: 84  DIVGRVVAVGEGVDTARIGERVLVDPSIR-------DPPEDDPA-DIDYIGS-ERDGGFA 134

Query: 140 NQVVHPADLCFKLPDNVSLEE-GAMCEPLSVGLHACRRANIGPETNVLIMGA-GPIGLVT 197
              V PA+  + +   +S  E        S   +   RA +G    VL+ GA G +G   
Sbjct: 135 EYTVVPAENAYPVNSPLSDVELATFPCSYSTAENMLERAGVGAGETVLVTGASGGVGSAL 194

Query: 198 MLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDV 257
           +  A+  GA  IVI      +    + LGAD ++     L      +   +   G  +DV
Sbjct: 195 VQLAKRRGA--IVIAVAGAAKEEAVRALGADTVILRDAPL------LADAKALGGEPVDV 246

Query: 258 SFDCAGFNKTMSTALSATRAGGKVCLVG 285
             D  G        L   R GG+    G
Sbjct: 247 VADVVG-GPLFPDLLRLLRPGGRYVTAG 273

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 350

>gnl|CDD|176212 cd08250, Mgc45594_like, Mgc45594 gene product and other MDR family members

 Score = 45.7 bits (109), Expect = 2e-05
 Identities = 27/76 (35%), Positives = 35/76 (46%), Gaps = 8/76 (10%)

Query: 30  KIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCA---DFVVKEPMVIGHECAGVIE 86
            I    +P  GP +VLV+ + VGI  SD+++      A   D  VK P   G E  G + 
Sbjct: 19  SIVDVPVPLPGPGEVLVKNRFVGINASDINF-----TAGRYDPGVKPPFDCGFEGVGEVV 73

Query: 87  KVGSEVKTLVPGDRVA 102
            VG  V     GD VA
Sbjct: 74  AVGEGVTDFKVGDAVA 89

Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 329

>gnl|CDD|176183 cd05280, MDR_yhdh_yhfp, Yhdh and yhfp-like putative quinone oxidoreductases

 Score = 41.0 bits (97), Expect = 7e-04
 Identities = 61/252 (24%), Positives = 91/252 (36%), Gaps = 59/252 (23%)

Query: 74  PMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCD----HCKGGRYNLCPEMKFF 129
           P   G + AG +    S+      GD V           D                    
Sbjct: 58  PHTPGIDAAGTVVS--SDDPRFREGDEVL------VTGYDLGMNT--------------- 94

Query: 130 ATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMC-------EPLSVGLHACRRANIGPE 182
                 G  A  V  PAD    LP+ +SL E AM          LSV  H        PE
Sbjct: 95  -----DGGFAEYVRVPADWVVPLPEGLSLRE-AMILGTAGFTAALSV--HRLEDNGQTPE 146

Query: 183 -TNVLIMGA-GPIGL--VTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQ 238
              VL+ GA G +G   V +L    +    +V +   + +    K LGA  ++    + +
Sbjct: 147 DGPVLVTGATGGVGSIAVAILAKLGY---TVVALTGKEEQADYLKSLGASEVL----DRE 199

Query: 239 DIAEEVEK-IQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGM-GHHEMTVPLT 296
           D+ +E +K + KA   G     D  G    ++  L  T+ GG V   G     E+T  + 
Sbjct: 200 DLLDESKKPLLKARWAGA---IDTVG-GDVLANLLKQTKYGGVVASCGNAAGPELTTTVL 255

Query: 297 PAAVREVDVVGV 308
           P  +R V ++G+
Sbjct: 256 PFILRGVSLLGI 267

Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 325

>gnl|CDD|234024 TIGR02817, adh_fam_1, zinc-binding alcohol dehydrogenase family protein

 Score = 40.5 bits (95), Expect = 9e-04
 Identities = 22/65 (33%), Positives = 31/65 (47%), Gaps = 3/65 (4%)

Query: 37  PSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLV 96
           P  G  D+LV +KA+ +   D    K          +P ++G + AGV+  VG EV    
Sbjct: 25  PKPGGRDLLVEVKAISVNPVDT---KVRARMAPEAGQPKILGWDAAGVVVAVGDEVTLFK 81

Query: 97  PGDRV 101
           PGD V
Sbjct: 82  PGDEV 86

Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). While some current members of this family carry designations as putative alginate lyase, it seems no sequence with a direct characterization as such is detected by this model [Energy metabolism, Fermentation]. Length = 336

>gnl|CDD|225136 COG2226, UbiE, Methylase involved in ubiquinone/menaquinone biosynthesis [Coenzyme metabolism]

 Score = 39.9 bits (94), Expect = 0.001
 Identities = 32/119 (26%), Positives = 47/119 (39%), Gaps = 25/119 (21%)

Query: 163 MCEPLSVGLH------ACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDD 216
           M + +S GLH            I P   VL +  G  G + +L A++ G   +V +D+ +
Sbjct: 27  MNDLMSFGLHRLWRRALISLLGIKPGDKVLDVACG-TGDMALLLAKSVGTGEVVGLDISE 85

Query: 217 YRLSVAKE-LGADNIVKVSTNLQDIAEE--VEKIQKAMGTGIDVSFDCAGFNKTMSTAL 272
             L VA+E L    +  V   + D AE               D SFD      T+S  L
Sbjct: 86  SMLEVAREKLKKKGVQNVEFVVGD-AENLPFP----------DNSFDAV----TISFGL 129

Length = 238

>gnl|CDD|176231 cd08270, MDR4, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 38.5 bits (90), Expect = 0.004
 Identities = 67/309 (21%), Positives = 96/309 (31%), Gaps = 78/309 (25%)

Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIE-- 86
           L++     P   P++ LVR+ A+ +   ++ +            +  V G + AGV+E  
Sbjct: 14  LRLGEVPDPQPAPHEALVRVAAISLNRGELKFAAER-------PDGAVPGWDAAGVVERA 66

Query: 87  -------KVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLA 139
                   VG+ V  L                                        G+ A
Sbjct: 67  AADGSGPAVGARVVGLGAM-------------------------------------GAWA 89

Query: 140 NQVVHPADLCFKLPDNVSLEEGAMCEPLSV----GLHACRRANIGPETNVLIMGA-GPIG 194
             V  P      LPD VS  + A    L V     L A RR        VL+ GA G +G
Sbjct: 90  ELVAVPTGWLAVLPDGVSFAQAAT---LPVAGVTALRALRRGGPLLGRRVLVTGASGGVG 146

Query: 195 LVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTG 254
              +  A   GA  +V V     R    +ELGA             AE V    +  G  
Sbjct: 147 RFAVQLAALAGA-HVVAVVGSPARAEGLRELGA-------------AEVVVGGSELSGAP 192

Query: 255 IDVSFDCAGFNKTMSTALSATRAGGKVCLVGM-GHHEMTVPLTPAA-VREVDVVGVFRYK 312
           +D+  D  G    ++ AL     GG V  VG                      +  F   
Sbjct: 193 VDLVVDSVG-GPQLARALELLAPGGTVVSVGSSSGEPAVFNPAAFVGGGGGRRLYTFFLY 251

Query: 313 NTWPLCLEL 321
           +  PL  +L
Sbjct: 252 DGEPLAADL 260

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 305

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	364
KOG0024	354	consensus Sorbitol dehydrogenase [Secondary metabo	100.0
COG1064	339	AdhP Zn-dependent alcohol dehydrogenases [General	100.0
PRK09880	343	L-idonate 5-dehydrogenase; Provisional	100.0
KOG0023	360	consensus Alcohol dehydrogenase, class V [Secondar	100.0
cd08239	339	THR_DH_like L-threonine dehydrogenase (TDH)-like.	100.0
COG1062	366	AdhC Zn-dependent alcohol dehydrogenases, class II	100.0
cd08281	371	liver_ADH_like1 Zinc-dependent alcohol dehydrogena	100.0
PLN02740	381	Alcohol dehydrogenase-like	100.0
PLN02827	378	Alcohol dehydrogenase-like	100.0
COG0604	326	Qor NADPH:quinone reductase and related Zn-depende	100.0
TIGR03451	358	mycoS_dep_FDH mycothiol-dependent formaldehyde deh	100.0
PLN02702	364	L-idonate 5-dehydrogenase	100.0
TIGR02818	368	adh_III_F_hyde S-(hydroxymethyl)glutathione dehydr	100.0
PRK10309	347	galactitol-1-phosphate dehydrogenase; Provisional	100.0
COG1063	350	Tdh Threonine dehydrogenase and related Zn-depende	100.0
cd08301	369	alcohol_DH_plants Plant alcohol dehydrogenase. NAD	100.0
TIGR02819	393	fdhA_non_GSH formaldehyde dehydrogenase, glutathio	100.0
PLN02586	360	probable cinnamyl alcohol dehydrogenase	100.0
cd08300	368	alcohol_DH_class_III class III alcohol dehydrogena	100.0
cd08233	351	butanediol_DH_like (2R,3R)-2,3-butanediol dehydrog	100.0
TIGR03201	349	dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-Co	100.0
cd08277	365	liver_alcohol_DH_like Liver alcohol dehydrogenase.	100.0
cd08230	355	glucose_DH Glucose dehydrogenase. Glucose dehydrog	100.0
PLN02178	375	cinnamyl-alcohol dehydrogenase	100.0
KOG0022	375	consensus Alcohol dehydrogenase, class III [Second	100.0
KOG1197	336	consensus Predicted quinone oxidoreductase [Energy	100.0
TIGR02822	329	adh_fam_2 zinc-binding alcohol dehydrogenase famil	100.0
cd08237	341	ribitol-5-phosphate_DH ribitol-5-phosphate dehydro	100.0
PLN02514	357	cinnamyl-alcohol dehydrogenase	100.0
PRK10083	339	putative oxidoreductase; Provisional	100.0
cd08231	361	MDR_TM0436_like Hypothetical enzyme TM0436 resembl	100.0
TIGR01202	308	bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyl	100.0
cd05285	343	sorbitol_DH Sorbitol dehydrogenase. Sorbitol and a	100.0
cd08285	351	NADP_ADH NADP(H)-dependent alcohol dehydrogenases.	100.0
cd08256	350	Zn_ADH2 Alcohol dehydrogenases of the MDR family.	100.0
cd08238	410	sorbose_phosphate_red L-sorbose-1-phosphate reduct	100.0
cd08296	333	CAD_like Cinnamyl alcohol dehydrogenases (CAD). Ci	100.0
cd05284	340	arabinose_DH_like D-arabinose dehydrogenase. This	100.0
cd08283	386	FDH_like_1 Glutathione-dependent formaldehyde dehy	100.0
cd08299	373	alcohol_DH_class_I_II_IV class I, II, IV alcohol d	100.0
cd08232	339	idonate-5-DH L-idonate 5-dehydrogenase. L-idonate	100.0
PRK05396	341	tdh L-threonine 3-dehydrogenase; Validated	100.0
cd05278	347	FDH_like Formaldehyde dehydrogenases. Formaldehyde	100.0
cd08286	345	FDH_like_ADH2 formaldehyde dehydrogenase (FDH)-lik	100.0
cd05279	365	Zn_ADH1 Liver alcohol dehydrogenase and related zi	100.0
cd08246	393	crotonyl_coA_red crotonyl-CoA reductase. Crotonyl-	100.0
cd08284	344	FDH_like_2 Glutathione-dependent formaldehyde dehy	100.0
KOG0025	354	consensus Zn2+-binding dehydrogenase (nuclear rece	100.0
cd08262	341	Zn_ADH8 Alcohol dehydrogenases of the MDR family.	100.0
cd08265	384	Zn_ADH3 Alcohol dehydrogenases of the MDR family.	100.0
cd08235	343	iditol_2_DH_like L-iditol 2-dehydrogenase. Putativ	100.0
cd08261	337	Zn_ADH7 Alcohol dehydrogenases of the MDR family.	100.0
cd08242	319	MDR_like Medium chain dehydrogenases/reductase (MD	100.0
cd08278	365	benzyl_alcohol_DH Benzyl alcohol dehydrogenase. Be	100.0
cd08240	350	6_hydroxyhexanoate_dh_like 6-hydroxyhexanoate dehy	100.0
cd08279	363	Zn_ADH_class_III Class III alcohol dehydrogenase.	100.0
cd08234	334	threonine_DH_like L-threonine dehydrogenase. L-thr	100.0
cd08287	345	FDH_like_ADH3 formaldehyde dehydrogenase (FDH)-lik	100.0
cd08236	343	sugar_DH NAD(P)-dependent sugar dehydrogenases. Th	100.0
cd08263	367	Zn_ADH10 Alcohol dehydrogenases of the MDR family.	100.0
cd08260	345	Zn_ADH6 Alcohol dehydrogenases of the MDR family.	100.0
cd08291	324	ETR_like_1 2-enoyl thioester reductase (ETR) like	100.0
TIGR01751	398	crot-CoA-red crotonyl-CoA reductase. The enzyme mo	100.0
cd05281	341	TDH Threonine dehydrogenase. L-threonine dehydroge	100.0
cd05283	337	CAD1 Cinnamyl alcohol dehydrogenases (CAD). Cinnam	100.0
TIGR00692	340	tdh L-threonine 3-dehydrogenase. E. coli His-90 mo	100.0
cd08297	341	CAD3 Cinnamyl alcohol dehydrogenases (CAD). These	100.0
PLN03154	348	putative allyl alcohol dehydrogenase; Provisional	100.0
cd08282	375	PFDH_like Pseudomonas putida aldehyde-dismutating	100.0
PRK13771	334	putative alcohol dehydrogenase; Provisional	100.0
PRK09422	338	ethanol-active dehydrogenase/acetaldehyde-active r	100.0
cd08254	338	hydroxyacyl_CoA_DH 6-hydroxycyclohex-1-ene-1-carbo	100.0
cd08295	338	double_bond_reductase_like Arabidopsis alkenal dou	100.0
cd08259	332	Zn_ADH5 Alcohol dehydrogenases of the MDR family.	100.0
TIGR02825	325	B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15	100.0
cd08293	345	PTGR2 Prostaglandin reductase. Prostaglandins and	100.0
TIGR03366	280	HpnZ_proposed putative phosphonate catabolism asso	100.0
cd08292	324	ETR_like_2 2-enoyl thioester reductase (ETR) like	100.0
cd08298	329	CAD2 Cinnamyl alcohol dehydrogenases (CAD). These	100.0
cd08294	329	leukotriene_B4_DH_like 13-PGR is a bifunctional en	100.0
cd08266	342	Zn_ADH_like1 Alcohol dehydrogenases of the MDR fam	100.0
cd08274	350	MDR9 Medium chain dehydrogenases/reductase (MDR)/z	100.0
cd08264	325	Zn_ADH_like2 Alcohol dehydrogenases of the MDR fam	100.0
cd08245	330	CAD Cinnamyl alcohol dehydrogenases (CAD) and rela	100.0
COG2130	340	Putative NADP-dependent oxidoreductases [General f	100.0
cd08258	306	Zn_ADH4 Alcohol dehydrogenases of the MDR family.	100.0
cd08244	324	MDR_enoyl_red Possible enoyl reductase. Member ide	100.0
TIGR02817	336	adh_fam_1 zinc-binding alcohol dehydrogenase famil	100.0
cd08269	312	Zn_ADH9 Alcohol dehydrogenases of the MDR family.	100.0
cd08290	341	ETR 2-enoyl thioester reductase (ETR). 2-enoyl thi	100.0
PTZ00354	334	alcohol dehydrogenase; Provisional	100.0
cd08270	305	MDR4 Medium chain dehydrogenases/reductase (MDR)/z	100.0
KOG1198	347	consensus Zinc-binding oxidoreductase [Energy prod	100.0
cd08276	336	MDR7 Medium chain dehydrogenases/reductase (MDR)/z	100.0
PRK10754	327	quinone oxidoreductase, NADPH-dependent; Provision	100.0
cd08249	339	enoyl_reductase_like enoyl_reductase_like. Member	100.0
cd08250	329	Mgc45594_like Mgc45594 gene product and other MDR	100.0
cd05280	325	MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone	100.0
cd05282	323	ETR_like 2-enoyl thioester reductase-like. 2-enoyl	100.0
TIGR02823	323	oxido_YhdH putative quinone oxidoreductase, YhdH/Y	100.0
cd08243	320	quinone_oxidoreductase_like_1 Quinone oxidoreducta	100.0
cd08289	326	MDR_yhfp_like Yhfp putative quinone oxidoreductase	100.0
cd08252	336	AL_MDR Arginate lyase and other MDR family members	100.0
cd08253	325	zeta_crystallin Zeta-crystallin with NADP-dependen	100.0
cd05276	323	p53_inducible_oxidoreductase PIG3 p53-inducible qu	100.0
cd08288	324	MDR_yhdh Yhdh putative quinone oxidoreductases. Yh	100.0
cd08248	350	RTN4I1 Human Reticulon 4 Interacting Protein 1. Hu	100.0
cd05288	329	PGDH Prostaglandin dehydrogenases. Prostaglandins	100.0
cd08272	326	MDR6 Medium chain dehydrogenases/reductase (MDR)/z	100.0
cd08247	352	AST1_like AST1 is a cytoplasmic protein associated	100.0
cd05286	320	QOR2 Quinone oxidoreductase (QOR). Quinone oxidore	100.0
cd08273	331	MDR8 Medium chain dehydrogenases/reductase (MDR)/z	100.0
cd08251	303	polyketide_synthase polyketide synthase. Polyketid	100.0
cd08271	325	MDR5 Medium chain dehydrogenases/reductase (MDR)/z	100.0
cd05188	271	MDR Medium chain reductase/dehydrogenase (MDR)/zin	100.0
TIGR02824	325	quinone_pig3 putative NAD(P)H quinone oxidoreducta	100.0
cd08268	328	MDR2 Medium chain dehydrogenases/reductase (MDR)/z	100.0
cd08241	323	QOR1 Quinone oxidoreductase (QOR). QOR catalyzes t	100.0
cd05289	309	MDR_like_2 alcohol dehydrogenase and quinone reduc	100.0
cd08275	337	MDR3 Medium chain dehydrogenases/reductase (MDR)/z	100.0
cd08267	319	MDR1 Medium chain dehydrogenases/reductase (MDR)/z	99.98
cd05195	293	enoyl_red enoyl reductase of polyketide synthase.	99.97
smart00829	288	PKS_ER Enoylreductase. Enoylreductase in Polyketid	99.97
cd08255	277	2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_	99.97
KOG1196	343	consensus Predicted NAD-dependent oxidoreductase [	99.96
KOG1202	2376	consensus Animal-type fatty acid synthase and rela	99.94
PF08240	109	ADH_N: Alcohol dehydrogenase GroES-like domain; In	99.89
PF00107	130	ADH_zinc_N: Zinc-binding dehydrogenase; InterPro:	99.7
cd00401	413	AdoHcyase S-adenosyl-L-homocysteine hydrolase (Ado	99.4
PRK09424	509	pntA NAD(P) transhydrogenase subunit alpha; Provis	99.39
PF13602	127	ADH_zinc_N_2: Zinc-binding dehydrogenase; PDB: 3TQ	99.34
TIGR00561	511	pntA NAD(P) transhydrogenase, alpha subunit. In so	98.55
PF11017	314	DUF2855: Protein of unknown function (DUF2855); In	98.54
PRK11873	272	arsM arsenite S-adenosylmethyltransferase; Reviewe	98.49
PRK05476	425	S-adenosyl-L-homocysteine hydrolase; Provisional	98.24
PRK08306	296	dipicolinate synthase subunit A; Reviewed	98.22
PRK00517	250	prmA ribosomal protein L11 methyltransferase; Revi	98.21
cd05213	311	NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain	98.12
TIGR00936	406	ahcY adenosylhomocysteinase. This enzyme hydrolyze	98.02
COG2518	209	Pcm Protein-L-isoaspartate carboxylmethyltransfera	97.97
TIGR01035	417	hemA glutamyl-tRNA reductase. This enzyme, togethe	97.87
TIGR00518	370	alaDH alanine dehydrogenase. The family of known L	97.85
PLN02494	477	adenosylhomocysteinase	97.76
PRK12771	564	putative glutamate synthase (NADPH) small subunit;	97.62
PRK00045	423	hemA glutamyl-tRNA reductase; Reviewed	97.59
PRK00377	198	cbiT cobalt-precorrin-6Y C(15)-methyltransferase;	97.56
PRK08324	681	short chain dehydrogenase; Validated	97.52
TIGR02853	287	spore_dpaA dipicolinic acid synthetase, A subunit.	97.46
PTZ00075	476	Adenosylhomocysteinase; Provisional	97.34
COG2242	187	CobL Precorrin-6B methylase 2 [Coenzyme metabolism	97.34
PRK13943	322	protein-L-isoaspartate O-methyltransferase; Provis	97.26
PRK05786	238	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	97.25
COG0300	265	DltE Short-chain dehydrogenases of various substra	97.25
TIGR00406	288	prmA ribosomal protein L11 methyltransferase. Ribo	97.23
PF01135	209	PCMT: Protein-L-isoaspartate(D-aspartate) O-methyl	97.19
TIGR02469	124	CbiT precorrin-6Y C5,15-methyltransferase (decarbo	97.16
PRK05993	277	short chain dehydrogenase; Provisional	97.16
PF01488	135	Shikimate_DH: Shikimate / quinate 5-dehydrogenase;	97.1
PRK13942	212	protein-L-isoaspartate O-methyltransferase; Provis	97.07
PRK12742	237	oxidoreductase; Provisional	97.05
COG3288	356	PntA NAD/NADP transhydrogenase alpha subunit [Ener	97.01
COG3967	245	DltE Short-chain dehydrogenase involved in D-alani	96.98
PF12847	112	Methyltransf_18: Methyltransferase domain; PDB: 3G	96.92
TIGR00080	215	pimt protein-L-isoaspartate(D-aspartate) O-methylt	96.88
COG4221	246	Short-chain alcohol dehydrogenase of unknown speci	96.78
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.77
PRK08017	256	oxidoreductase; Provisional	96.77
PRK11705	383	cyclopropane fatty acyl phospholipid synthase; Pro	96.75
PF02353	273	CMAS: Mycolic acid cyclopropane synthetase; InterP	96.74
TIGR00438	188	rrmJ cell division protein FtsJ.	96.74
PRK13944	205	protein-L-isoaspartate O-methyltransferase; Provis	96.73
PRK14967	223	putative methyltransferase; Provisional	96.7
PRK05693	274	short chain dehydrogenase; Provisional	96.7
COG0421	282	SpeE Spermidine synthase [Amino acid transport and	96.63
KOG1205	282	consensus Predicted dehydrogenase [Secondary metab	96.61
KOG1209	289	consensus 1-Acyl dihydroxyacetone phosphate reduct	96.6
COG2230	283	Cfa Cyclopropane fatty acid synthase and related m	96.58
PRK06182	273	short chain dehydrogenase; Validated	96.55
PRK06139	330	short chain dehydrogenase; Provisional	96.49
PF13460	183	NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X	96.48
PRK06057	255	short chain dehydrogenase; Provisional	96.46
COG2519	256	GCD14 tRNA(1-methyladenosine) methyltransferase an	96.46
PRK00107	187	gidB 16S rRNA methyltransferase GidB; Reviewed	96.38
PRK07402	196	precorrin-6B methylase; Provisional	96.38
PF02826	178	2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy	96.35
PRK06949	258	short chain dehydrogenase; Provisional	96.33
PRK12939	250	short chain dehydrogenase; Provisional	96.3
PRK06463	255	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.29
PLN02823	336	spermine synthase	96.27
PRK07060	245	short chain dehydrogenase; Provisional	96.26
COG1748	389	LYS9 Saccharopine dehydrogenase and related protei	96.25
PRK04457	262	spermidine synthase; Provisional	96.24
PLN03209	576	translocon at the inner envelope of chloroplast su	96.23
COG0686	371	Ald Alanine dehydrogenase [Amino acid transport an	96.23
PRK07814	263	short chain dehydrogenase; Provisional	96.23
PRK00536	262	speE spermidine synthase; Provisional	96.21
PRK08265	261	short chain dehydrogenase; Provisional	96.21
PRK07109	334	short chain dehydrogenase; Provisional	96.2
COG2226	238	UbiE Methylase involved in ubiquinone/menaquinone	96.2
PF06325	295	PrmA: Ribosomal protein L11 methyltransferase (Prm	96.18
PRK07825	273	short chain dehydrogenase; Provisional	96.16
KOG1201	300	consensus Hydroxysteroid 17-beta dehydrogenase 11	96.16
COG4122	219	Predicted O-methyltransferase [General function pr	96.15
PRK07806	248	short chain dehydrogenase; Provisional	96.14
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.13
PRK00811	283	spermidine synthase; Provisional	96.11
PRK07326	237	short chain dehydrogenase; Provisional	96.1
PRK08177	225	short chain dehydrogenase; Provisional	96.09
PRK05866	293	short chain dehydrogenase; Provisional	96.07
PRK06200	263	2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog	96.03
PF01262	168	AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal	96.01
PRK06196	315	oxidoreductase; Provisional	95.98
PRK12828	239	short chain dehydrogenase; Provisional	95.97
PRK07677	252	short chain dehydrogenase; Provisional	95.97
PRK05872	296	short chain dehydrogenase; Provisional	95.96
PRK07533	258	enoyl-(acyl carrier protein) reductase; Provisiona	95.94
TIGR02356	202	adenyl_thiF thiazole biosynthesis adenylyltransfer	95.93
PRK08217	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	95.93
PRK01581	374	speE spermidine synthase; Validated	95.91
PRK07831	262	short chain dehydrogenase; Provisional	95.91
TIGR03325	262	BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro	95.9
PRK06841	255	short chain dehydrogenase; Provisional	95.89
TIGR00446	264	nop2p NOL1/NOP2/sun family putative RNA methylase.	95.88
PRK06505	271	enoyl-(acyl carrier protein) reductase; Provisiona	95.88
TIGR01832	248	kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod	95.85
PRK08317	241	hypothetical protein; Provisional	95.83
PRK06500	249	short chain dehydrogenase; Provisional	95.8
PRK06128	300	oxidoreductase; Provisional	95.8
PRK00312	212	pcm protein-L-isoaspartate O-methyltransferase; Re	95.77
cd05311	226	NAD_bind_2_malic_enz NAD(P) binding domain of mali	95.76
PRK06198	260	short chain dehydrogenase; Provisional	95.76
PRK07832	272	short chain dehydrogenase; Provisional	95.75
PRK12829	264	short chain dehydrogenase; Provisional	95.75
PF00106	167	adh_short: short chain dehydrogenase alcohol dehyd	95.74
PRK08862	227	short chain dehydrogenase; Provisional	95.73
PLN02366	308	spermidine synthase	95.73
PRK09186	256	flagellin modification protein A; Provisional	95.72
PRK03369	488	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	95.71
PRK06484	520	short chain dehydrogenase; Validated	95.7
cd01065	155	NAD_bind_Shikimate_DH NAD(P) binding domain of Shi	95.7
PRK05867	253	short chain dehydrogenase; Provisional	95.7
PRK06603	260	enoyl-(acyl carrier protein) reductase; Provisiona	95.7
COG2264	300	PrmA Ribosomal protein L11 methylase [Translation,	95.69
PRK06180	277	short chain dehydrogenase; Provisional	95.66
PRK07062	265	short chain dehydrogenase; Provisional	95.66
PF00670	162	AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase	95.66
PRK13940	414	glutamyl-tRNA reductase; Provisional	95.65
PRK12937	245	short chain dehydrogenase; Provisional	95.63
PF03435	386	Saccharop_dh: Saccharopine dehydrogenase ; InterPr	95.61
PRK04266	226	fibrillarin; Provisional	95.61
PRK08267	260	short chain dehydrogenase; Provisional	95.6
PRK07231	251	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	95.6
PRK07502	307	cyclohexadienyl dehydrogenase; Validated	95.58
CHL00194	317	ycf39 Ycf39; Provisional	95.58
PRK08589	272	short chain dehydrogenase; Validated	95.58
PRK06483	236	dihydromonapterin reductase; Provisional	95.58
PRK09072	263	short chain dehydrogenase; Provisional	95.56
PRK07774	250	short chain dehydrogenase; Provisional	95.55
PF08704	247	GCD14: tRNA methyltransferase complex GCD14 subuni	95.55
PRK08642	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	95.54
TIGR01470	205	cysG_Nterm siroheme synthase, N-terminal domain. T	95.54
PRK07574	385	formate dehydrogenase; Provisional	95.53
PRK08703	239	short chain dehydrogenase; Provisional	95.5
PRK08415	274	enoyl-(acyl carrier protein) reductase; Provisiona	95.49
PLN02780	320	ketoreductase/ oxidoreductase	95.48
PRK08340	259	glucose-1-dehydrogenase; Provisional	95.47
PRK08339	263	short chain dehydrogenase; Provisional	95.47
PRK08628	258	short chain dehydrogenase; Provisional	95.46
TIGR00417	270	speE spermidine synthase. the SpeE subunit of sper	95.45
PRK08287	187	cobalt-precorrin-6Y C(15)-methyltransferase; Valid	95.45
PRK08618	325	ornithine cyclodeaminase; Validated	95.45
COG0031	300	CysK Cysteine synthase [Amino acid transport and m	95.45
PRK07453	322	protochlorophyllide oxidoreductase; Validated	95.43
PRK07523	255	gluconate 5-dehydrogenase; Provisional	95.42
PRK07576	264	short chain dehydrogenase; Provisional	95.38
PRK07478	254	short chain dehydrogenase; Provisional	95.38
PRK05854	313	short chain dehydrogenase; Provisional	95.38
PRK08643	256	acetoin reductase; Validated	95.37
PRK08594	257	enoyl-(acyl carrier protein) reductase; Provisiona	95.37
TIGR00563	426	rsmB ribosomal RNA small subunit methyltransferase	95.33
PRK14901	434	16S rRNA methyltransferase B; Provisional	95.33
PRK07024	257	short chain dehydrogenase; Provisional	95.32
TIGR01809	282	Shik-DH-AROM shikimate-5-dehydrogenase, fungal ARO	95.31
PRK12823	260	benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat	95.3
PRK01683	258	trans-aconitate 2-methyltransferase; Provisional	95.28
PRK07063	260	short chain dehydrogenase; Provisional	95.27
PRK08690	261	enoyl-(acyl carrier protein) reductase; Provisiona	95.25
PRK05717	255	oxidoreductase; Validated	95.24
PRK12481	251	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	95.22
PLN02233	261	ubiquinone biosynthesis methyltransferase	95.21
PRK06079	252	enoyl-(acyl carrier protein) reductase; Provisiona	95.21
PRK07035	252	short chain dehydrogenase; Provisional	95.21
PRK04148	134	hypothetical protein; Provisional	95.2
PRK13394	262	3-hydroxybutyrate dehydrogenase; Provisional	95.2
PRK07904	253	short chain dehydrogenase; Provisional	95.19
PRK07454	241	short chain dehydrogenase; Provisional	95.19
PLN02244	340	tocopherol O-methyltransferase	95.19
PLN03139	386	formate dehydrogenase; Provisional	95.18
PRK08159	272	enoyl-(acyl carrier protein) reductase; Provisiona	95.18
PRK07984	262	enoyl-(acyl carrier protein) reductase; Provisiona	95.18
PRK06179	270	short chain dehydrogenase; Provisional	95.17
PLN03075	296	nicotianamine synthase; Provisional	95.17
PRK06935	258	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	95.17
PRK14103	255	trans-aconitate 2-methyltransferase; Provisional	95.16
PRK07890	258	short chain dehydrogenase; Provisional	95.16
PF13241	103	NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_	95.15
PRK08226	263	short chain dehydrogenase; Provisional	95.15
PRK14903	431	16S rRNA methyltransferase B; Provisional	95.15
PTZ00098	263	phosphoethanolamine N-methyltransferase; Provision	95.15
PRK06172	253	short chain dehydrogenase; Provisional	95.13
PF01209	233	Ubie_methyltran: ubiE/COQ5 methyltransferase famil	95.12
PRK06953	222	short chain dehydrogenase; Provisional	95.12
TIGR00138	181	gidB 16S rRNA methyltransferase GidB. GidB (glucos	95.11
COG0169	283	AroE Shikimate 5-dehydrogenase [Amino acid transpo	95.1
PLN02253	280	xanthoxin dehydrogenase	95.1
PRK07985	294	oxidoreductase; Provisional	95.09
PRK05875	276	short chain dehydrogenase; Provisional	95.09
PRK08213	259	gluconate 5-dehydrogenase; Provisional	95.07
PRK08063	250	enoyl-(acyl carrier protein) reductase; Provisiona	95.06
PRK12743	256	oxidoreductase; Provisional	95.04
PRK12384	259	sorbitol-6-phosphate dehydrogenase; Provisional	95.02
PRK06138	252	short chain dehydrogenase; Provisional	95.0
TIGR03840	213	TMPT_Se_Te thiopurine S-methyltransferase, Se/Te d	94.96
PRK05653	246	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	94.95
PRK14904	445	16S rRNA methyltransferase B; Provisional	94.95
PRK06114	254	short chain dehydrogenase; Provisional	94.95
COG2227	243	UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-	94.94
PRK12429	258	3-hydroxybutyrate dehydrogenase; Provisional	94.93
PRK06194	287	hypothetical protein; Provisional	94.93
PF01596	205	Methyltransf_3: O-methyltransferase; InterPro: IPR	94.92
PRK12747	252	short chain dehydrogenase; Provisional	94.92
PRK06719	157	precorrin-2 dehydrogenase; Validated	94.91
PRK05876	275	short chain dehydrogenase; Provisional	94.91
PRK06398	258	aldose dehydrogenase; Validated	94.9
PRK06077	252	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	94.9
PRK06197	306	short chain dehydrogenase; Provisional	94.89
PRK08277	278	D-mannonate oxidoreductase; Provisional	94.88
PRK12549	284	shikimate 5-dehydrogenase; Reviewed	94.86
PRK08416	260	7-alpha-hydroxysteroid dehydrogenase; Provisional	94.86
PRK06701	290	short chain dehydrogenase; Provisional	94.84
PRK11207	197	tellurite resistance protein TehB; Provisional	94.84
PRK14902	444	16S rRNA methyltransferase B; Provisional	94.83
PRK08264	238	short chain dehydrogenase; Validated	94.82
PRK08220	252	2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated	94.82
PRK07856	252	short chain dehydrogenase; Provisional	94.8
PRK06181	263	short chain dehydrogenase; Provisional	94.79
PRK08993	253	2-deoxy-D-gluconate 3-dehydrogenase; Validated	94.79
KOG0725	270	consensus Reductases with broad range of substrate	94.77
PRK08251	248	short chain dehydrogenase; Provisional	94.77
cd01078	194	NAD_bind_H4MPT_DH NADP binding domain of methylene	94.74
TIGR03206	250	benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr	94.74
PRK10538	248	malonic semialdehyde reductase; Provisional	94.73
PRK06720	169	hypothetical protein; Provisional	94.72
PRK09291	257	short chain dehydrogenase; Provisional	94.71
PRK08085	254	gluconate 5-dehydrogenase; Provisional	94.7
cd00755	231	YgdL_like Family of activating enzymes (E1) of ubi	94.68
PRK11933	470	yebU rRNA (cytosine-C(5)-)-methyltransferase RsmF;	94.67
TIGR02355	240	moeB molybdopterin synthase sulfurylase MoeB. This	94.66
PRK11036	255	putative S-adenosyl-L-methionine-dependent methylt	94.64
PRK07791	286	short chain dehydrogenase; Provisional	94.63
PRK07067	257	sorbitol dehydrogenase; Provisional	94.62
PF00899	135	ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-a	94.59
cd01483	143	E1_enzyme_family Superfamily of activating enzymes	94.57
PRK03612	521	spermidine synthase; Provisional	94.57
PRK09242	257	tropinone reductase; Provisional	94.57
PRK07688	339	thiamine/molybdopterin biosynthesis ThiF/MoeB-like	94.56
PRK08263	275	short chain dehydrogenase; Provisional	94.56
PLN02476	278	O-methyltransferase	94.54
PRK08644	212	thiamine biosynthesis protein ThiF; Provisional	94.51
PLN02781	234	Probable caffeoyl-CoA O-methyltransferase	94.51
PRK06914	280	short chain dehydrogenase; Provisional	94.51
PRK12936	245	3-ketoacyl-(acyl-carrier-protein) reductase NodG;	94.5
PRK06482	276	short chain dehydrogenase; Provisional	94.47
PF02670	129	DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate re	94.47
cd01487	174	E1_ThiF_like E1_ThiF_like. Member of superfamily o	94.47
PF01564	246	Spermine_synth: Spermine/spermidine synthase; Inte	94.46
PRK05690	245	molybdopterin biosynthesis protein MoeB; Provision	94.45
PRK12367	245	short chain dehydrogenase; Provisional	94.45
PRK05884	223	short chain dehydrogenase; Provisional	94.44
PRK06523	260	short chain dehydrogenase; Provisional	94.44
PRK12475	338	thiamine/molybdopterin biosynthesis MoeB-like prot	94.42
PRK09134	258	short chain dehydrogenase; Provisional	94.41
PRK09730	247	putative NAD(P)-binding oxidoreductase; Provisiona	94.41
PRK06718	202	precorrin-2 dehydrogenase; Reviewed	94.4
COG0373	414	HemA Glutamyl-tRNA reductase [Coenzyme metabolism]	94.38
PRK12938	246	acetyacetyl-CoA reductase; Provisional	94.37
PRK06113	255	7-alpha-hydroxysteroid dehydrogenase; Validated	94.31
PRK07097	265	gluconate 5-dehydrogenase; Provisional	94.29
PRK10901	427	16S rRNA methyltransferase B; Provisional	94.28
PRK06997	260	enoyl-(acyl carrier protein) reductase; Provisiona	94.28
PRK06125	259	short chain dehydrogenase; Provisional	94.27
PRK08303	305	short chain dehydrogenase; Provisional	94.26
TIGR02354	200	thiF_fam2 thiamine biosynthesis protein ThiF, fami	94.25
COG0144	355	Sun tRNA and rRNA cytosine-C5-methylases [Translat	94.22
TIGR02752	231	MenG_heptapren 2-heptaprenyl-1,4-naphthoquinone me	94.21
PRK07775	274	short chain dehydrogenase; Provisional	94.21
PRK12826	251	3-ketoacyl-(acyl-carrier-protein) reductase; Revie	94.2
PF08241	95	Methyltransf_11: Methyltransferase domain; InterPr	94.18
PRK11761	296	cysM cysteine synthase B; Provisional	94.16
PRK12825	249	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	94.16
PRK08300	302	acetaldehyde dehydrogenase; Validated	94.15
PRK11188	209	rrmJ 23S rRNA methyltransferase J; Provisional	94.14
PRK06124	256	gluconate 5-dehydrogenase; Provisional	94.14
PRK07666	239	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	94.13
TIGR01318	467	gltD_gamma_fam glutamate synthase small subunit fa	94.1
PRK07074	257	short chain dehydrogenase; Provisional	94.1
TIGR01963	255	PHB_DH 3-hydroxybutyrate dehydrogenase. This model	94.08
TIGR03215	285	ac_ald_DH_ac acetaldehyde dehydrogenase (acetylati	94.05
cd01075	200	NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l	94.03
PRK06484	520	short chain dehydrogenase; Validated	94.03
PTZ00146	293	fibrillarin; Provisional	94.01
PRK07424	406	bifunctional sterol desaturase/short chain dehydro	93.98
PRK13243	333	glyoxylate reductase; Reviewed	93.97
PRK12935	247	acetoacetyl-CoA reductase; Provisional	93.95
PRK05597	355	molybdopterin biosynthesis protein MoeB; Validated	93.94
PRK06947	248	glucose-1-dehydrogenase; Provisional	93.94
PRK07577	234	short chain dehydrogenase; Provisional	93.92
PRK08936	261	glucose-1-dehydrogenase; Provisional	93.92
PRK06101	240	short chain dehydrogenase; Provisional	93.9
PRK12749	288	quinate/shikimate dehydrogenase; Reviewed	93.88
PRK12550	272	shikimate 5-dehydrogenase; Reviewed	93.88
PRK09135	249	pteridine reductase; Provisional	93.86
PRK05557	248	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	93.86
PRK05650	270	short chain dehydrogenase; Provisional	93.85
PRK08945	247	putative oxoacyl-(acyl carrier protein) reductase;	93.85
PRK08328	231	hypothetical protein; Provisional	93.84
PRK00121	202	trmB tRNA (guanine-N(7)-)-methyltransferase; Revie	93.83
TIGR01289	314	LPOR light-dependent protochlorophyllide reductase	93.83
TIGR01829	242	AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy	93.82
PRK15116	268	sulfur acceptor protein CsdL; Provisional	93.8
PRK12809	639	putative oxidoreductase Fe-S binding subunit; Revi	93.8
PRK12744	257	short chain dehydrogenase; Provisional	93.79
PRK07340	304	ornithine cyclodeaminase; Validated	93.79
KOG1200	256	consensus Mitochondrial/plastidial beta-ketoacyl-A	93.78
TIGR00507	270	aroE shikimate 5-dehydrogenase. This model finds p	93.77
PF01113	124	DapB_N: Dihydrodipicolinate reductase, N-terminus;	93.75
PRK12548	289	shikimate 5-dehydrogenase; Provisional	93.74
KOG3201	201	consensus Uncharacterized conserved protein [Funct	93.7
PRK05562	223	precorrin-2 dehydrogenase; Provisional	93.61
PRK07370	258	enoyl-(acyl carrier protein) reductase; Validated	93.59
cd00757	228	ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1	93.55
PRK05855	582	short chain dehydrogenase; Validated	93.52
PRK07792	306	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	93.51
TIGR00477	195	tehB tellurite resistance protein TehB. Part of a	93.49
TIGR01138	290	cysM cysteine synthase B. Alternate name: O-acetyl	93.45
PRK13656	398	trans-2-enoyl-CoA reductase; Provisional	93.4
PLN03013	429	cysteine synthase	93.37
PRK12769	654	putative oxidoreductase Fe-S binding subunit; Revi	93.34
PRK06171	266	sorbitol-6-phosphate 2-dehydrogenase; Provisional	93.33
PRK06123	248	short chain dehydrogenase; Provisional	93.3
COG1052	324	LdhA Lactate dehydrogenase and related dehydrogena	93.28
PRK08762	376	molybdopterin biosynthesis protein MoeB; Validated	93.28
PRK07889	256	enoyl-(acyl carrier protein) reductase; Provisiona	93.26
PRK12746	254	short chain dehydrogenase; Provisional	93.25
PF03446	163	NAD_binding_2: NAD binding domain of 6-phosphogluc	93.22
PRK00216	239	ubiE ubiquinone/menaquinone biosynthesis methyltra	93.21
PRK15469	312	ghrA bifunctional glyoxylate/hydroxypyruvate reduc	93.18
cd01080	168	NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of	93.14
PLN02657	390	3,8-divinyl protochlorophyllide a 8-vinyl reductas	93.13
PF01118	121	Semialdhyde_dh: Semialdehyde dehydrogenase, NAD bi	93.13
cd05211	217	NAD_bind_Glu_Leu_Phe_Val NAD(P) binding domain of	93.1
PRK14175	286	bifunctional 5,10-methylene-tetrahydrofolate dehyd	93.09
PRK05599	246	hypothetical protein; Provisional	93.09
TIGR02632	676	RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc	92.98
PRK12827	249	short chain dehydrogenase; Provisional	92.96
PLN00141	251	Tic62-NAD(P)-related group II protein; Provisional	92.9
PRK07102	243	short chain dehydrogenase; Provisional	92.87
PRK10258	251	biotin biosynthesis protein BioC; Provisional	92.86
PRK13255	218	thiopurine S-methyltransferase; Reviewed	92.86
PF02558	151	ApbA: Ketopantoate reductase PanE/ApbA; InterPro:	92.86
PRK08278	273	short chain dehydrogenase; Provisional	92.84
TIGR02685	267	pter_reduc_Leis pteridine reductase. Pteridine red	92.83
PRK14192	283	bifunctional 5,10-methylene-tetrahydrofolate dehyd	92.83
PRK05565	247	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	92.83
PF01408	120	GFO_IDH_MocA: Oxidoreductase family, NAD-binding R	92.83
PLN02730	303	enoyl-[acyl-carrier-protein] reductase	92.82
TIGR02622	349	CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member	92.73
TIGR02415	254	23BDH acetoin reductases. One member of this famil	92.65
PRK10669	558	putative cation:proton antiport protein; Provision	92.64
KOG4022	236	consensus Dihydropteridine reductase DHPR/QDPR [Am	92.63
TIGR02992	326	ectoine_eutC ectoine utilization protein EutC. Mem	92.62
PF02254	116	TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg	92.5
PLN02336	475	phosphoethanolamine N-methyltransferase	92.49
PRK12480	330	D-lactate dehydrogenase; Provisional	92.43
PRK05600	370	thiamine biosynthesis protein ThiF; Validated	92.36
COG4106	257	Tam Trans-aconitate methyltransferase [General fun	92.33
PLN02589	247	caffeoyl-CoA O-methyltransferase	92.32
PLN02490	340	MPBQ/MSBQ methyltransferase	92.29
PRK12745	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	92.29
PF07991	165	IlvN: Acetohydroxy acid isomeroreductase, catalyti	92.29
PRK06940	275	short chain dehydrogenase; Provisional	92.24
PRK06141	314	ornithine cyclodeaminase; Validated	92.21
KOG1199	260	consensus Short-chain alcohol dehydrogenase/3-hydr	92.21
KOG1610	322	consensus Corticosteroid 11-beta-dehydrogenase and	92.2
KOG1252	362	consensus Cystathionine beta-synthase and related	92.19
PLN00203	519	glutamyl-tRNA reductase	92.13
TIGR00452	314	methyltransferase, putative. Known examples to dat	92.11
PRK07069	251	short chain dehydrogenase; Validated	92.1
PRK07411	390	hypothetical protein; Validated	92.07
TIGR00308	374	TRM1 tRNA(guanine-26,N2-N2) methyltransferase. Thi	92.03

>KOG0024 consensus Sorbitol dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=1.4e-60  Score=409.42  Aligned_cols=346  Identities=54%  Similarity=0.920  Sum_probs=316.5

Q ss_pred             hhcceeEEEecCCceEEEEecCCCC-CCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCCCCC
Q 017916           15 EEVNMAAWLLGVNTLKIQPFELPSL-GPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVK   93 (364)
Q Consensus        15 ~~~~~~~~~~~~~~~~~~~~~~p~~-~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~   93 (364)
                      ...++|+++.++..+++.+.|.|++ +|+||+|++.++|||.+|++++.....+.+..+.|.++|||.+|+|.++|+.|+
T Consensus         2 ~~~~~A~vl~g~~di~i~~~p~p~i~~p~eVlv~i~a~GICGSDvHy~~~G~ig~~v~k~PmvlGHEssGiV~evG~~Vk   81 (354)
T KOG0024|consen    2 AADNLALVLRGKGDIRIEQRPIPTITDPDEVLVAIKAVGICGSDVHYYTHGRIGDFVVKKPMVLGHESSGIVEEVGDEVK   81 (354)
T ss_pred             CcccceeEEEccCceeEeeCCCCCCCCCCEEEEEeeeEEecCccchhhccCCcCccccccccccccccccchhhhccccc
Confidence            3568899999999999999999997 999999999999999999999998888888888999999999999999999999


Q ss_pred             CCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCccchhhhhhhHHHHHH
Q 017916           94 TLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHA  173 (364)
Q Consensus        94 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~lP~~~~~~~aa~~~~~~~a~~~  173 (364)
                      ++|+||||...+..+|+.|.+|++++.++|+++.+.++...+|++++|+..+++++++||++++++++|++.++++++|+
T Consensus        82 ~LkVGDrVaiEpg~~c~~cd~CK~GrYNlCp~m~f~atpp~~G~la~y~~~~~dfc~KLPd~vs~eeGAl~ePLsV~~HA  161 (354)
T KOG0024|consen   82 HLKVGDRVAIEPGLPCRDCDFCKEGRYNLCPHMVFCATPPVDGTLAEYYVHPADFCYKLPDNVSFEEGALIEPLSVGVHA  161 (354)
T ss_pred             ccccCCeEEecCCCccccchhhhCcccccCCccccccCCCcCCceEEEEEechHheeeCCCCCchhhcccccchhhhhhh
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcC-
Q 017916          174 CRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMG-  252 (364)
Q Consensus       174 l~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~-  252 (364)
                      .+++++++|++|||+|+|++|+.+...||++|++.|++++..+.|++++++||++.+.+....+ +..+..+......+ 
T Consensus       162 cr~~~vk~Gs~vLV~GAGPIGl~t~l~Aka~GA~~VVi~d~~~~Rle~Ak~~Ga~~~~~~~~~~-~~~~~~~~v~~~~g~  240 (354)
T KOG0024|consen  162 CRRAGVKKGSKVLVLGAGPIGLLTGLVAKAMGASDVVITDLVANRLELAKKFGATVTDPSSHKS-SPQELAELVEKALGK  240 (354)
T ss_pred             hhhcCcccCCeEEEECCcHHHHHHHHHHHHcCCCcEEEeecCHHHHHHHHHhCCeEEeeccccc-cHHHHHHHHHhhccc
Confidence            9999999999999999999999999999999999999999999999999999999876643322 22222222222233 


Q ss_pred             CCccEEEECCCCHHHHHHHHHhcccCCEEEEEcCCCCCccccchhhhhcCcEEEeeccCCC-cHHHHHHHHHcCCCCCCC
Q 017916          253 TGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKN-TWPLCLELLRSGKIDVKP  331 (364)
Q Consensus       253 ~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~g~~~~~~  331 (364)
                      ..+|+.|||+|....++.++..++.+|+++..++......++......|++++.|.+.+.. .+..+++++++|+++.++
T Consensus       241 ~~~d~~~dCsG~~~~~~aai~a~r~gGt~vlvg~g~~~~~fpi~~v~~kE~~~~g~fry~~~~y~~ai~li~sGki~~k~  320 (354)
T KOG0024|consen  241 KQPDVTFDCSGAEVTIRAAIKATRSGGTVVLVGMGAEEIQFPIIDVALKEVDLRGSFRYCNGDYPTAIELVSSGKIDVKP  320 (354)
T ss_pred             cCCCeEEEccCchHHHHHHHHHhccCCEEEEeccCCCccccChhhhhhheeeeeeeeeeccccHHHHHHHHHcCCcCchh
Confidence            5699999999998999999999999999999999888889999999999999999999955 999999999999999999


Q ss_pred             ceEEEeeCChhhHHHHHHHHhcCC-CceEEEEe
Q 017916          332 LVTHRFGFSQKEVEEAFETSARGG-TAIKVMFN  363 (364)
Q Consensus       332 ~~~~~~~~~~~~~~~a~~~~~~~~-~~gkvvv~  363 (364)
                      ++++.|++  +++.+||+....+. ..-|++++
T Consensus       321 lIT~r~~~--~~~~eAf~~~~~~~~~~iKv~i~  351 (354)
T KOG0024|consen  321 LITHRYKF--DDADEAFETLQHGEEGVIKVIIT  351 (354)
T ss_pred             heeccccc--chHHHHHHHHHhCcCCceEEEEe
Confidence            99999999  99999999988774 35577765

>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]

Probab=100.00  E-value=5.5e-60  Score=418.89  Aligned_cols=330  Identities=31%  Similarity=0.504  Sum_probs=296.8

Q ss_pred             hcceeEEEecC-CceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCCCCCC
Q 017916           16 EVNMAAWLLGV-NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT   94 (364)
Q Consensus        16 ~~~~~~~~~~~-~~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~   94 (364)
                      .+|+|+++... +++++.+++.|+++++||+|+|+|+|+|++|++.++|.+..   ..+|++||||.+|+|+++|++|+.
T Consensus         2 ~~mkA~~~~~~~~pl~i~e~~~p~p~~~eVlI~v~~~GVChsDlH~~~G~~~~---~~~P~ipGHEivG~V~~vG~~V~~   78 (339)
T COG1064           2 MTMKAAVLKKFGQPLEIEEVPVPEPGPGEVLIKVEACGVCHTDLHVAKGDWPV---PKLPLIPGHEIVGTVVEVGEGVTG   78 (339)
T ss_pred             cceEEEEEccCCCCceEEeccCCCCCCCeEEEEEEEEeecchhhhhhcCCCCC---CCCCccCCcceEEEEEEecCCCcc
Confidence            46888888865 45999999999999999999999999999999999987754   359999999999999999999999


Q ss_pred             CCCCCEEEE-cCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCccchhhh-hhhHHHHH
Q 017916           95 LVPGDRVAL-EPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMC-EPLSVGLH  172 (364)
Q Consensus        95 ~~~Gd~V~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~lP~~~~~~~aa~~-~~~~~a~~  172 (364)
                      ||+||||.+ +...+|..|.||..+++++|++..+.+. +.+|+|+||+++++.+++++|++++++.||.+ ....|+|+
T Consensus        79 ~k~GDrVgV~~~~~~Cg~C~~C~~G~E~~C~~~~~~gy-~~~GGyaeyv~v~~~~~~~iP~~~d~~~aApllCaGiT~y~  157 (339)
T COG1064          79 LKVGDRVGVGWLVISCGECEYCRSGNENLCPNQKITGY-TTDGGYAEYVVVPARYVVKIPEGLDLAEAAPLLCAGITTYR  157 (339)
T ss_pred             CCCCCEEEecCccCCCCCCccccCcccccCCCccccce-eecCcceeEEEEchHHeEECCCCCChhhhhhhhcCeeeEee
Confidence            999999988 8889999999999999999999776664 58999999999999999999999999999966 58889999


Q ss_pred             HHHHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcC
Q 017916          173 ACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMG  252 (364)
Q Consensus       173 ~l~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~  252 (364)
                      +|++.+++||++|+|.|.|++|++++|+|+++|+ .|++++++++|.+++++||++++++..  .+++.+.++.      
T Consensus       158 alk~~~~~pG~~V~I~G~GGlGh~avQ~Aka~ga-~Via~~~~~~K~e~a~~lGAd~~i~~~--~~~~~~~~~~------  228 (339)
T COG1064         158 ALKKANVKPGKWVAVVGAGGLGHMAVQYAKAMGA-EVIAITRSEEKLELAKKLGADHVINSS--DSDALEAVKE------  228 (339)
T ss_pred             ehhhcCCCCCCEEEEECCcHHHHHHHHHHHHcCC-eEEEEeCChHHHHHHHHhCCcEEEEcC--CchhhHHhHh------
Confidence            9999999999999999999999999999999998 789999999999999999999998743  3454444432      


Q ss_pred             CCccEEEECCCCHHHHHHHHHhcccCCEEEEEcCCC-CC-ccccchhhhhcCcEEEeeccC-CCcHHHHHHHHHcCCCCC
Q 017916          253 TGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGH-HE-MTVPLTPAAVREVDVVGVFRY-KNTWPLCLELLRSGKIDV  329 (364)
Q Consensus       253 ~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~-~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~g~~~~  329 (364)
                       .+|++||+++ +..++..++.|+++|+++.+|... .+ ..++...++.+++++.|+... +.++++++++..+|++  
T Consensus       229 -~~d~ii~tv~-~~~~~~~l~~l~~~G~~v~vG~~~~~~~~~~~~~~li~~~~~i~GS~~g~~~d~~e~l~f~~~g~I--  304 (339)
T COG1064         229 -IADAIIDTVG-PATLEPSLKALRRGGTLVLVGLPGGGPIPLLPAFLLILKEISIVGSLVGTRADLEEALDFAAEGKI--  304 (339)
T ss_pred             -hCcEEEECCC-hhhHHHHHHHHhcCCEEEEECCCCCcccCCCCHHHhhhcCeEEEEEecCCHHHHHHHHHHHHhCCc--
Confidence             3999999999 999999999999999999999774 43 346677789999999999887 7889999999999999  


Q ss_pred             CCceEEEeeCChhhHHHHHHHHhcCCCceEEEEeC
Q 017916          330 KPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  364 (364)
Q Consensus       330 ~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  364 (364)
                      +|.+.+.+++  +++++||+.|++++..|++|+++
T Consensus       305 kp~i~e~~~l--~~in~A~~~m~~g~v~gR~Vi~~  337 (339)
T COG1064         305 KPEILETIPL--DEINEAYERMEKGKVRGRAVIDM  337 (339)
T ss_pred             eeeEEeeECH--HHHHHHHHHHHcCCeeeEEEecC
Confidence            6766578899  99999999999999999999874

>PRK09880 L-idonate 5-dehydrogenase; Provisional

Probab=100.00  E-value=1.6e-52  Score=387.48  Aligned_cols=337  Identities=31%  Similarity=0.552  Sum_probs=290.5

Q ss_pred             hcceeEEEecCCceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCCCCCCC
Q 017916           16 EVNMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTL   95 (364)
Q Consensus        16 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~   95 (364)
                      ..++++++.++..+++.+.+.| ++++||+|||.++|+|++|++.+.+...+.+...+|.++|||++|+|+++  ++++|
T Consensus         3 ~~~~~~~~~~~~~~~~~~~~~p-~~~~evlVkv~a~gic~sD~~~~~~g~~~~~~~~~p~v~GhE~~G~V~~v--~v~~~   79 (343)
T PRK09880          3 VKTQSCVVAGKKDVAVTEQEIE-WNNNGTLVQITRGGICGSDLHYYQEGKVGNFVIKAPMVLGHEVIGKIVHS--DSSGL   79 (343)
T ss_pred             ccceEEEEecCCceEEEecCCC-CCCCeEEEEEEEEEECccccHhhccCCcccccccCCcccCcccEEEEEEe--cCccC
Confidence            3467888999999999999997 68999999999999999999987533222223467999999999999999  78899


Q ss_pred             CCCCEEEEcCCcCCCCCccccCCCCCCCCCcccccc----CCCCCcceeEEEecCCceEECCCCCCccchhhhhhhHHHH
Q 017916           96 VPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFAT----PPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGL  171 (364)
Q Consensus        96 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~g~~~~~v~~~~~~~~~lP~~~~~~~aa~~~~~~~a~  171 (364)
                      ++||+|+..+..+|..|++|..+++++|++..+++.    ...+|+|+||+++++++++++|+++++++++++.++++||
T Consensus        80 ~vGdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~~P~~l~~~~aa~~~~~~~a~  159 (343)
T PRK09880         80 KEGQTVAINPSKPCGHCKYCLSHNENQCTTMRFFGSAMYFPHVDGGFTRYKVVDTAQCIPYPEKADEKVMAFAEPLAVAI  159 (343)
T ss_pred             CCCCEEEECCCCCCcCChhhcCCChhhCCCcceeecccccCCCCCceeeeEEechHHeEECCCCCCHHHHHhhcHHHHHH
Confidence            999999999999999999999999999998776543    1247999999999999999999999988877777889999


Q ss_pred             HHHHHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHc
Q 017916          172 HACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAM  251 (364)
Q Consensus       172 ~~l~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~  251 (364)
                      +++++....+|++|||+|+|++|++++|+|+++|++.|++++.+++|.++++++|++.++++++  +++.+    +... 
T Consensus       160 ~al~~~~~~~g~~VlV~G~G~vG~~aiqlak~~G~~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~--~~~~~----~~~~-  232 (343)
T PRK09880        160 HAAHQAGDLQGKRVFVSGVGPIGCLIVAAVKTLGAAEIVCADVSPRSLSLAREMGADKLVNPQN--DDLDH----YKAE-  232 (343)
T ss_pred             HHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHHHHcCCcEEecCCc--ccHHH----Hhcc-
Confidence            9998777778999999999999999999999999987888989999999999999999887643  33332    2221 


Q ss_pred             CCCccEEEECCCCHHHHHHHHHhcccCCEEEEEcCCCCCccccchhhhhcCcEEEeeccCCCcHHHHHHHHHcCCCCCCC
Q 017916          252 GTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKP  331 (364)
Q Consensus       252 ~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~  331 (364)
                      .+++|++|||+|++..+..++++|+++|+++.+|.......++...+..+++++.+.....+.++++++++++|++.+.+
T Consensus       233 ~g~~D~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~k~~~i~g~~~~~~~~~~~~~l~~~g~i~~~~  312 (343)
T PRK09880        233 KGYFDVSFEVSGHPSSINTCLEVTRAKGVMVQVGMGGAPPEFPMMTLIVKEISLKGSFRFTEEFNTAVSWLANGVINPLP  312 (343)
T ss_pred             CCCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCCCCccCHHHHHhCCcEEEEEeeccccHHHHHHHHHcCCCCchh
Confidence            23699999999987888999999999999999997555455666677889999999887778899999999999997777


Q ss_pred             ceEEEeeCChhhHHHHHHHHhcCCCceEEEEeC
Q 017916          332 LVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  364 (364)
Q Consensus       332 ~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  364 (364)
                      .++++|+|  +++++|++.++++...||+++++
T Consensus       313 ~i~~~~~l--~~~~~A~~~~~~~~~~gKvvl~~  343 (343)
T PRK09880        313 LLSAEYPF--TDLEEALIFAGDKTQAAKVQLVF  343 (343)
T ss_pred             heEEEEEH--HHHHHHHHHHhcCCCceEEEEeC
Confidence            88999999  99999999999888889999874

>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=2.9e-51  Score=351.14  Aligned_cols=338  Identities=27%  Similarity=0.406  Sum_probs=287.0

Q ss_pred             ccchhcceeEEEec---CCceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEe
Q 017916           12 EDGEEVNMAAWLLG---VNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV   88 (364)
Q Consensus        12 ~~~~~~~~~~~~~~---~~~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~v   88 (364)
                      +..++.+++..+..   +.++++.+++.|+++++||+|+|+|+|+|.+|++.+.|.|..   ..+|.++|||.+|+|+++
T Consensus         4 ~~~p~k~~g~~~~~~~G~l~p~~~~~~~~~~g~~dv~vkI~~cGIChsDlH~~~gdwg~---s~~PlV~GHEiaG~Vvkv   80 (360)
T KOG0023|consen    4 MSIPEKQFGWAARDPSGVLSPEVFSFPVREPGENDVLVKIEYCGVCHSDLHAWKGDWGL---SKYPLVPGHEIAGVVVKV   80 (360)
T ss_pred             ccCchhhEEEEEECCCCCCCcceeEcCCCCCCCCcEEEEEEEEeccchhHHHhhccCCc---ccCCccCCceeeEEEEEE
Confidence            44556677777763   458888999999999999999999999999999999986632   688999999999999999


Q ss_pred             CCCCCCCCCCCEEEE-cCCcCCCCCccccCCCCCCCCCcccccc-CCC-----CCcceeEEEecCCceEECCCCCCccch
Q 017916           89 GSEVKTLVPGDRVAL-EPGISCWRCDHCKGGRYNLCPEMKFFAT-PPV-----HGSLANQVVHPADLCFKLPDNVSLEEG  161 (364)
Q Consensus        89 G~~v~~~~~Gd~V~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-----~g~~~~~v~~~~~~~~~lP~~~~~~~a  161 (364)
                      |++|+.|++||+|-+ .-...|..|.+|..+.+++|+++.+... ...     +|+|++|+++++.+++++|++++.+.|
T Consensus        81 Gs~V~~~kiGD~vGVg~~~~sC~~CE~C~~~~E~yCpk~~~t~~g~~~DGt~~~ggf~~~~~v~~~~a~kIP~~~pl~~a  160 (360)
T KOG0023|consen   81 GSNVTGFKIGDRVGVGWLNGSCLSCEYCKSGNENYCPKMHFTYNGVYHDGTITQGGFQEYAVVDEVFAIKIPENLPLASA  160 (360)
T ss_pred             CCCcccccccCeeeeeEEeccccCccccccCCcccCCceeEeccccccCCCCccCccceeEEEeeeeEEECCCCCChhhc
Confidence            999999999999944 6678899999999999999996555433 233     455999999999999999999999999


Q ss_pred             hhh-hhhHHHHHHHHHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecCh-hHHHHHHHcCCCeEEecCCCccc
Q 017916          162 AMC-EPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDD-YRLSVAKELGADNIVKVSTNLQD  239 (364)
Q Consensus       162 a~~-~~~~~a~~~l~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~-~~~~~~~~lg~~~~~~~~~~~~~  239 (364)
                      |.+ ....|.|..|...++.||++|-|.|+|++|.+++|+||++|. +|+++++++ +|.+.++.||++..++..+ +++
T Consensus       161 APlLCaGITvYspLk~~g~~pG~~vgI~GlGGLGh~aVq~AKAMG~-rV~vis~~~~kkeea~~~LGAd~fv~~~~-d~d  238 (360)
T KOG0023|consen  161 APLLCAGITVYSPLKRSGLGPGKWVGIVGLGGLGHMAVQYAKAMGM-RVTVISTSSKKKEEAIKSLGADVFVDSTE-DPD  238 (360)
T ss_pred             cchhhcceEEeehhHHcCCCCCcEEEEecCcccchHHHHHHHHhCc-EEEEEeCCchhHHHHHHhcCcceeEEecC-CHH
Confidence            944 577799999999999999999999996699999999999999 678887776 7778889999999887432 234


Q ss_pred             HHHHHHHHHHHcCCCccEEEECCCCHHHHHHHHHhcccCCEEEEEcCCCCCccccchhhhhcCcEEEeeccC-CCcHHHH
Q 017916          240 IAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY-KNTWPLC  318 (364)
Q Consensus       240 ~~~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~  318 (364)
                         .++++.++....+|-+.+.  +...+..++.+|+++|+++++|++.....++..++..+.+.+.|+... +.+.+++
T Consensus       239 ---~~~~~~~~~dg~~~~v~~~--a~~~~~~~~~~lk~~Gt~V~vg~p~~~~~~~~~~lil~~~~I~GS~vG~~ket~E~  313 (360)
T KOG0023|consen  239 ---IMKAIMKTTDGGIDTVSNL--AEHALEPLLGLLKVNGTLVLVGLPEKPLKLDTFPLILGRKSIKGSIVGSRKETQEA  313 (360)
T ss_pred             ---HHHHHHHhhcCcceeeeec--cccchHHHHHHhhcCCEEEEEeCcCCcccccchhhhcccEEEEeeccccHHHHHHH
Confidence               4555554445566666654  467888999999999999999998888889999999999999999876 8899999


Q ss_pred             HHHHHcCCCCCCCceEEEeeCChhhHHHHHHHHhcCCCceEEEEeC
Q 017916          319 LELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  364 (364)
Q Consensus       319 ~~~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  364 (364)
                      +++..++.+  ++.+ +..++  +++++||++|+++..++|.|+++
T Consensus       314 Ldf~a~~~i--k~~I-E~v~~--~~v~~a~erm~kgdV~yRfVvD~  354 (360)
T KOG0023|consen  314 LDFVARGLI--KSPI-ELVKL--SEVNEAYERMEKGDVRYRFVVDV  354 (360)
T ss_pred             HHHHHcCCC--cCce-EEEeh--hHHHHHHHHHHhcCeeEEEEEEc
Confidence            999999998  4444 66678  99999999999999999999874

>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like

Probab=100.00  E-value=2.9e-50  Score=372.24  Aligned_cols=336  Identities=34%  Similarity=0.566  Sum_probs=287.9

Q ss_pred             ceeEEEecCCceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCCCCCCCCC
Q 017916           18 NMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVP   97 (364)
Q Consensus        18 ~~~~~~~~~~~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~   97 (364)
                      |+++++.+++.+++++.+.|+++++||+|||.++++|++|+..+.+.+..  ....|.++|||++|+|+++|++++.|++
T Consensus         1 mka~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~gi~~~D~~~~~~~~~~--~~~~p~i~G~e~~G~V~~vG~~v~~~~~   78 (339)
T cd08239           1 MRGAVFPGDRTVELREFPVPVPGPGEVLLRVKASGLCGSDLHYYYHGHRA--PAYQGVIPGHEPAGVVVAVGPGVTHFRV   78 (339)
T ss_pred             CeEEEEecCCceEEEecCCCCCCCCeEEEEEEEEEeccccHHHHcCCCCc--cCCCCceeccCceEEEEEECCCCccCCC
Confidence            57888888899999999999999999999999999999999988764322  1235899999999999999999999999


Q ss_pred             CCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCccchhhhh-hhHHHHHHHHH
Q 017916           98 GDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHACRR  176 (364)
Q Consensus        98 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~lP~~~~~~~aa~~~-~~~~a~~~l~~  176 (364)
                      ||+|++.+..+|..|++|+.+++++|.+.........+|+|+||+.+++++++++|+++++++|+.+. ++.+||++++.
T Consensus        79 Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~g~~~~G~~ae~~~v~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l~~  158 (339)
T cd08239          79 GDRVMVYHYVGCGACRNCRRGWMQLCTSKRAAYGWNRDGGHAEYMLVPEKTLIPLPDDLSFADGALLLCGIGTAYHALRR  158 (339)
T ss_pred             CCEEEECCCCCCCCChhhhCcCcccCcCcccccccCCCCcceeEEEechHHeEECCCCCCHHHhhhhcchHHHHHHHHHh
Confidence            99999999999999999999999999887542223457999999999999999999999999988775 88899999988


Q ss_pred             cCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcCCCcc
Q 017916          177 ANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGID  256 (364)
Q Consensus       177 ~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d  256 (364)
                      +.+++|++|||+|+|++|++++|+|+.+|++.|++++++++|.++++++|++.+++++.  ++ .+.+.++.  .+.++|
T Consensus       159 ~~~~~g~~vlV~G~G~vG~~~~~~ak~~G~~~vi~~~~~~~~~~~~~~~ga~~~i~~~~--~~-~~~~~~~~--~~~~~d  233 (339)
T cd08239         159 VGVSGRDTVLVVGAGPVGLGALMLARALGAEDVIGVDPSPERLELAKALGADFVINSGQ--DD-VQEIRELT--SGAGAD  233 (339)
T ss_pred             cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEEcCCc--ch-HHHHHHHh--CCCCCC
Confidence            88999999999998999999999999999975888888999999999999998887643  23 44454443  245899


Q ss_pred             EEEECCCCHHHHHHHHHhcccCCEEEEEcCCCCCcccc-chhhhhcCcEEEeeccC-CCcHHHHHHHHHcCCCCCCCceE
Q 017916          257 VSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVP-LTPAAVREVDVVGVFRY-KNTWPLCLELLRSGKIDVKPLVT  334 (364)
Q Consensus       257 ~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~g~~~~~~~~~  334 (364)
                      ++|||+|+...+..++++|+++|+++.+|..... .+. ...+..+++++.+.+.. .+.++++++++.+|++.+.+.++
T Consensus       234 ~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~g~i~~~~~i~  312 (339)
T cd08239         234 VAIECSGNTAARRLALEAVRPWGRLVLVGEGGEL-TIEVSNDLIRKQRTLIGSWYFSVPDMEECAEFLARHKLEVDRLVT  312 (339)
T ss_pred             EEEECCCCHHHHHHHHHHhhcCCEEEEEcCCCCc-ccCcHHHHHhCCCEEEEEecCCHHHHHHHHHHHHcCCCChhHeEE
Confidence            9999999877778899999999999999864332 222 23467789999998775 46899999999999997777889


Q ss_pred             EEeeCChhhHHHHHHHHhcCCCceEEEEeC
Q 017916          335 HRFGFSQKEVEEAFETSARGGTAIKVMFNL  364 (364)
Q Consensus       335 ~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  364 (364)
                      ++|+|  +++++|++.++++. .||+|+++
T Consensus       313 ~~~~l--~~~~~a~~~~~~~~-~gKvvi~~  339 (339)
T cd08239         313 HRFGL--DQAPEAYALFAQGE-SGKVVFVF  339 (339)
T ss_pred             EEecH--HHHHHHHHHHHcCC-ceEEEEeC
Confidence            99999  99999999998875 79999975

MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at

>COG1062 AdhC Zn-dependent alcohol dehydrogenases, class III [Energy production and conversion]

Probab=100.00  E-value=4.5e-50  Score=347.84  Aligned_cols=334  Identities=29%  Similarity=0.482  Sum_probs=285.2

Q ss_pred             ceeEEEe-cCCceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCCCCCCCC
Q 017916           18 NMAAWLL-GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLV   96 (364)
Q Consensus        18 ~~~~~~~-~~~~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~   96 (364)
                      +++++.. ..++|+++++++++|+++||+||+.++|+|++|...+.|.++.    .+|.++|||++|+|++||++|+++|
T Consensus         3 ~~aAV~~~~~~Pl~i~ei~l~~P~~gEVlVri~AtGVCHTD~~~~~G~~p~----~~P~vLGHEgAGiVe~VG~gVt~vk   78 (366)
T COG1062           3 TRAAVAREAGKPLEIEEVDLDPPRAGEVLVRITATGVCHTDAHTLSGDDPE----GFPAVLGHEGAGIVEAVGEGVTSVK   78 (366)
T ss_pred             ceEeeeecCCCCeEEEEEecCCCCCCeEEEEEEEeeccccchhhhcCCCCC----CCceecccccccEEEEecCCccccC
Confidence            4566655 4589999999999999999999999999999999999986643    4899999999999999999999999


Q ss_pred             CCCEEEEcCCcCCCCCccccCCCCCCCCCcccc-------cc-----------CCCCC--cceeEEEecCCceEECCCCC
Q 017916           97 PGDRVALEPGISCWRCDHCKGGRYNLCPEMKFF-------AT-----------PPVHG--SLANQVVHPADLCFKLPDNV  156 (364)
Q Consensus        97 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~-----------~~~~g--~~~~~v~~~~~~~~~lP~~~  156 (364)
                      |||+|+......|..|++|..+++++|...--.       +.           ...-|  +|+||.++++..+++++++.
T Consensus        79 pGDhVI~~f~p~CG~C~~C~sGk~nlC~~~~~~~~kG~m~dGttrls~~~~~~~h~lG~stFa~y~vv~~~s~vki~~~~  158 (366)
T COG1062          79 PGDHVILLFTPECGQCKFCLSGKPNLCEAIRATQGKGTMPDGTTRLSGNGVPVYHYLGCSTFAEYTVVHEISLVKIDPDA  158 (366)
T ss_pred             CCCEEEEcccCCCCCCchhhCCCcccccchhhhcccccccCCceeeecCCcceeeeeccccchhheeecccceEECCCCC
Confidence            999999998899999999999999999632111       00           01223  89999999999999999999


Q ss_pred             Cccchhhhh-hhHHHHHHH-HHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecC
Q 017916          157 SLEEGAMCE-PLSVGLHAC-RRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVS  234 (364)
Q Consensus       157 ~~~~aa~~~-~~~~a~~~l-~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~  234 (364)
                      +++.++++- ...|.+-++ +.+++++|++|.|.|.|++|++++|-|+..|++.+++++..++|++++++||++++++-.
T Consensus       159 p~~~a~llGCgV~TG~Gav~nta~v~~G~tvaV~GlGgVGlaaI~gA~~agA~~IiAvD~~~~Kl~~A~~fGAT~~vn~~  238 (366)
T COG1062         159 PLEKACLLGCGVTTGIGAVVNTAKVEPGDTVAVFGLGGVGLAAIQGAKAAGAGRIIAVDINPEKLELAKKFGATHFVNPK  238 (366)
T ss_pred             CccceEEEeeeeccChHHhhhcccCCCCCeEEEEeccHhHHHHHHHHHHcCCceEEEEeCCHHHHHHHHhcCCceeecch
Confidence            999999885 677788765 789999999999999999999999999999999999999999999999999999988732


Q ss_pred             CCcccHHHHHHHHHHHcCCCccEEEECCCCHHHHHHHHHhcccCCEEEEEcCCCCCccccchh--hhhcCcEEEeeccC-
Q 017916          235 TNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTP--AAVREVDVVGVFRY-  311 (364)
Q Consensus       235 ~~~~~~~~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~--~~~~~~~~~~~~~~-  311 (364)
                      +. .+..+.+.+++   +.++|++|||+|+.+.++++++++.++|+.+..|.......++.+.  +... .+++|+... 
T Consensus       239 ~~-~~vv~~i~~~T---~gG~d~~~e~~G~~~~~~~al~~~~~~G~~v~iGv~~~~~~i~~~~~~lv~g-r~~~Gs~~G~  313 (366)
T COG1062         239 EV-DDVVEAIVELT---DGGADYAFECVGNVEVMRQALEATHRGGTSVIIGVAGAGQEISTRPFQLVTG-RVWKGSAFGG  313 (366)
T ss_pred             hh-hhHHHHHHHhc---CCCCCEEEEccCCHHHHHHHHHHHhcCCeEEEEecCCCCceeecChHHeecc-ceEEEEeecC
Confidence            21 14666665554   5699999999999999999999999999999999765544444444  3434 777887654 


Q ss_pred             ---CCcHHHHHHHHHcCCCCCCCceEEEeeCChhhHHHHHHHHhcCCCceEEEEe
Q 017916          312 ---KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFN  363 (364)
Q Consensus       312 ---~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~  363 (364)
                         +.++.++++++.+|++++.+++++.++|  ||+++||++|.+++.. |-|+.
T Consensus       314 ~~p~~diP~lv~~y~~Gkl~~d~lvt~~~~L--e~INeaf~~m~~G~~I-R~Vi~  365 (366)
T COG1062         314 ARPRSDIPRLVDLYMAGKLPLDRLVTHTIPL--EDINEAFDLMHEGKSI-RSVIR  365 (366)
T ss_pred             CccccchhHHHHHHHcCCCchhHHhhccccH--HHHHHHHHHHhCCcee-eEEec
Confidence               7789999999999999999999999999  9999999999999665 55544

>cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase)

Probab=100.00  E-value=4.7e-49  Score=368.07  Aligned_cols=334  Identities=33%  Similarity=0.502  Sum_probs=284.7

Q ss_pred             ceeEEEec---------CCceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEe
Q 017916           18 NMAAWLLG---------VNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV   88 (364)
Q Consensus        18 ~~~~~~~~---------~~~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~v   88 (364)
                      |+|+++..         ++.+++.+.|.|+++++||+|||.++++|++|+..+.|.+.    ..+|.++|||++|+|+++
T Consensus         1 mka~~~~~~g~~~~~~~~~~l~~~~~~~P~~~~~evlV~v~~~gi~~~D~~~~~g~~~----~~~p~i~GhE~~G~V~~v   76 (371)
T cd08281           1 MRAAVLRETGAPTPYADSRPLVIEEVELDPPGPGEVLVKIAAAGLCHSDLSVINGDRP----RPLPMALGHEAAGVVVEV   76 (371)
T ss_pred             CcceEEEecccccccccCCCceEEEeecCCCCCCeEEEEEEEEeeCccchHhhcCCCC----CCCCccCCccceeEEEEe
Confidence            45666652         47899999999999999999999999999999999887532    356899999999999999


Q ss_pred             CCCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCcccccc--------------------CCCCCcceeEEEecCCc
Q 017916           89 GSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFAT--------------------PPVHGSLANQVVHPADL  148 (364)
Q Consensus        89 G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~g~~~~~v~~~~~~  148 (364)
                      |++++++++||+|++.+..+|..|..|+.+++++|.+......                    ....|+|+||+.+++++
T Consensus        77 G~~v~~~~~GdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~g~G~~aey~~v~~~~  156 (371)
T cd08281          77 GEGVTDLEVGDHVVLVFVPSCGHCRPCAEGRPALCEPGAAANGAGTLLSGGRRLRLRGGEINHHLGVSAFAEYAVVSRRS  156 (371)
T ss_pred             CCCCCcCCCCCEEEEccCCCCCCCccccCCCcccccCccccccccccccCcccccccCcccccccCcccceeeEEecccc
Confidence            9999999999999998878899999999999999987532210                    00137999999999999


Q ss_pred             eEECCCCCCccchhhhh-hhHHHHHHH-HHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcC
Q 017916          149 CFKLPDNVSLEEGAMCE-PLSVGLHAC-RRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELG  226 (364)
Q Consensus       149 ~~~lP~~~~~~~aa~~~-~~~~a~~~l-~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg  226 (364)
                      ++++|+++++++|+++. .+.+||+++ +.+++++|++|||+|+|++|++++|+|+.+|++.|++++.+++|.++++++|
T Consensus       157 ~~~lP~~l~~~~aa~~~~~~~ta~~~~~~~~~i~~g~~VlV~G~G~vG~~a~~lak~~G~~~Vi~~~~~~~r~~~a~~~G  236 (371)
T cd08281         157 VVKIDKDVPLEIAALFGCAVLTGVGAVVNTAGVRPGQSVAVVGLGGVGLSALLGAVAAGASQVVAVDLNEDKLALARELG  236 (371)
T ss_pred             eEECCCCCChHHhhhhcchHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHHHHcC
Confidence            99999999999988775 778999987 5688999999999999999999999999999977888889999999999999


Q ss_pred             CCeEEecCCCcccHHHHHHHHHHHcCCCccEEEECCCCHHHHHHHHHhcccCCEEEEEcCCCC--CccccchhhhhcCcE
Q 017916          227 ADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHH--EMTVPLTPAAVREVD  304 (364)
Q Consensus       227 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~--~~~~~~~~~~~~~~~  304 (364)
                      +++++++.  .+++.+.++++.   ++++|++|||+|.+..+..++++++++|+++.+|....  ...++...+..++++
T Consensus       237 a~~~i~~~--~~~~~~~i~~~~---~~g~d~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~  311 (371)
T cd08281         237 ATATVNAG--DPNAVEQVRELT---GGGVDYAFEMAGSVPALETAYEITRRGGTTVTAGLPDPEARLSVPALSLVAEERT  311 (371)
T ss_pred             CceEeCCC--chhHHHHHHHHh---CCCCCEEEECCCChHHHHHHHHHHhcCCEEEEEccCCCCceeeecHHHHhhcCCE
Confidence            99887753  356666666653   34899999999988899999999999999999986432  234555567889999


Q ss_pred             EEeeccC----CCcHHHHHHHHHcCCCCCCCceEEEeeCChhhHHHHHHHHhcCCCceEEEE
Q 017916          305 VVGVFRY----KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMF  362 (364)
Q Consensus       305 ~~~~~~~----~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv  362 (364)
                      +.+.+..    .+.+.++++++++|++++.+.+++.|+|  +++++||+.++++...+|+++
T Consensus       312 i~g~~~~~~~~~~~~~~~~~l~~~g~i~~~~~i~~~~~l--~~~~~A~~~~~~~~~~~~vi~  371 (371)
T cd08281         312 LKGSYMGSCVPRRDIPRYLALYLSGRLPVDKLLTHRLPL--DEINEGFDRLAAGEAVRQVIL  371 (371)
T ss_pred             EEEEecCCCChHHHHHHHHHHHHcCCCCchhheeeeecH--HHHHHHHHHHhCCCceeeeeC
Confidence            9998754    4678899999999999777788999999  999999999999988888764

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd

>PLN02740 Alcohol dehydrogenase-like

Probab=100.00  E-value=5.4e-49  Score=368.66  Aligned_cols=347  Identities=26%  Similarity=0.425  Sum_probs=288.7

Q ss_pred             ccccchhcceeEEEecCC-ceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEe
Q 017916           10 EKEDGEEVNMAAWLLGVN-TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV   88 (364)
Q Consensus        10 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~v   88 (364)
                      +++..+.+|+++++.++. .+++.+.+.|+++++||+|||+++|+|++|++.+.|.+..  ...+|.++|||++|+|+++
T Consensus         3 ~~~~~~~~mka~~~~~~~~~~~~~e~~~P~~~~~eVlV~v~~~gic~sD~~~~~g~~~~--~~~~p~i~GhE~~G~V~~v   80 (381)
T PLN02740          3 ETQGKVITCKAAVAWGPGEPLVMEEIRVDPPQKMEVRIKILYTSICHTDLSAWKGENEA--QRAYPRILGHEAAGIVESV   80 (381)
T ss_pred             cccccceeeEEEEEecCCCCcEEEEeeCCCCCCCeEEEEEEEEecChhhHHHhCCCCcc--cCCCCccccccceEEEEEe
Confidence            344455679999998775 5899999999999999999999999999999998875421  2357899999999999999


Q ss_pred             CCCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCcccccc-----------------------CCCCCcceeEEEec
Q 017916           89 GSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFAT-----------------------PPVHGSLANQVVHP  145 (364)
Q Consensus        89 G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------------~~~~g~~~~~v~~~  145 (364)
                      |+++++|++||+|++.+..+|..|.+|..+..++|.+......                       ....|+|+||++++
T Consensus        81 G~~v~~~~vGdrV~~~~~~~cg~C~~c~~g~~~~C~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~G~~aey~~v~  160 (381)
T PLN02740         81 GEGVEDLKAGDHVIPIFNGECGDCRYCKRDKTNLCETYRVDPFKSVMVNDGKTRFSTKGDGQPIYHFLNTSTFTEYTVLD  160 (381)
T ss_pred             CCCCCcCCCCCEEEecCCCCCCCChhhcCCCcccccCccccccccccccCCCcccccccCCCcccccccCccceeEEEEe
Confidence            9999999999999999999999999999999999998653210                       00259999999999


Q ss_pred             CCceEECCCCCCccchhhhh-hhHHHHHHH-HHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHH
Q 017916          146 ADLCFKLPDNVSLEEGAMCE-PLSVGLHAC-RRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAK  223 (364)
Q Consensus       146 ~~~~~~lP~~~~~~~aa~~~-~~~~a~~~l-~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~  223 (364)
                      .++++++|+++++++++.+. .+.+||+++ +.+++++|++|||+|+|++|++++|+|+.+|++.|++++.+++|.++++
T Consensus       161 ~~~~~~iP~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~VlV~G~G~vG~~a~q~ak~~G~~~Vi~~~~~~~r~~~a~  240 (381)
T PLN02740        161 SACVVKIDPNAPLKKMSLLSCGVSTGVGAAWNTANVQAGSSVAIFGLGAVGLAVAEGARARGASKIIGVDINPEKFEKGK  240 (381)
T ss_pred             hHHeEECCCCCCHHHhhhhcccchhhHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHCCCCcEEEEcCChHHHHHHH
Confidence            99999999999998888765 788999887 5688999999999999999999999999999976888889999999999


Q ss_pred             HcCCCeEEecCCCcccHHHHHHHHHHHcCCCccEEEECCCCHHHHHHHHHhcccC-CEEEEEcCCCCCccccchhh-hhc
Q 017916          224 ELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAG-GKVCLVGMGHHEMTVPLTPA-AVR  301 (364)
Q Consensus       224 ~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~-~~~  301 (364)
                      ++|++.++++....+++.+.++++.   ++++|++||++|.++.+..++.+++++ |+++.+|.......+..... ..+
T Consensus       241 ~~Ga~~~i~~~~~~~~~~~~v~~~~---~~g~dvvid~~G~~~~~~~a~~~~~~g~G~~v~~G~~~~~~~~~~~~~~~~~  317 (381)
T PLN02740        241 EMGITDFINPKDSDKPVHERIREMT---GGGVDYSFECAGNVEVLREAFLSTHDGWGLTVLLGIHPTPKMLPLHPMELFD  317 (381)
T ss_pred             HcCCcEEEecccccchHHHHHHHHh---CCCCCEEEECCCChHHHHHHHHhhhcCCCEEEEEccCCCCceecccHHHHhc
Confidence            9999988876543345666676654   338999999999888999999999997 99999986543222222222 346


Q ss_pred             CcEEEeeccC----CCcHHHHHHHHHcCCCCCCCceEEEeeCChhhHHHHHHHHhcCCCceEEEEeC
Q 017916          302 EVDVVGVFRY----KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  364 (364)
Q Consensus       302 ~~~~~~~~~~----~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  364 (364)
                      ++++.|....    ...+.++++++.++.+++.+.++++|+|  +++++|++.++++.. .|++|++
T Consensus       318 ~~~i~g~~~~~~~~~~~~~~~~~~~~~g~i~~~~~it~~~~l--~e~~~A~~~~~~~~~-~k~~~~~  381 (381)
T PLN02740        318 GRSITGSVFGDFKGKSQLPNLAKQCMQGVVNLDGFITHELPF--EKINEAFQLLEDGKA-LRCLLHL  381 (381)
T ss_pred             CCeEEEEecCCCCcHHHHHHHHHHHHcCCCChHHheeEEecH--HHHHHHHHHHHCCCc-eeEEEeC
Confidence            7888876543    3468899999999999777788999999  999999999988854 5999874

>PLN02827 Alcohol dehydrogenase-like

Probab=100.00  E-value=8.7e-49  Score=366.33  Aligned_cols=344  Identities=23%  Similarity=0.395  Sum_probs=286.8

Q ss_pred             cccccchhcceeEEEecC-CceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEE
Q 017916            9 GEKEDGEEVNMAAWLLGV-NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEK   87 (364)
Q Consensus         9 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~   87 (364)
                      +.+++....|+++++.++ +.+++++.|.|+++++||+|||.++|+|++|+..+.+.      ..+|.++|||++|+|++
T Consensus         4 ~~~~~~~~~mka~~~~~~~~~~~~~e~~~P~~~~~eVlVkv~~~gic~sD~~~~~g~------~~~p~i~GhE~~G~V~~   77 (378)
T PLN02827          4 SISQPNVITCRAAVAWGAGEALVMEEVEVSPPQPLEIRIKVVSTSLCRSDLSAWESQ------ALFPRIFGHEASGIVES   77 (378)
T ss_pred             cccCcccceeEEEEEecCCCCceEEEeecCCCCCCEEEEEEEEEecChhHHHHhcCC------CCCCeeecccceEEEEE
Confidence            334445567889988875 57999999999999999999999999999999987653      14688999999999999


Q ss_pred             eCCCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCcccccc--------------------CCCCCcceeEEEecCC
Q 017916           88 VGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFAT--------------------PPVHGSLANQVVHPAD  147 (364)
Q Consensus        88 vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~g~~~~~v~~~~~  147 (364)
                      +|+++++|++||+|++.+...|..|.+|+.+++++|.+......                    ....|+|+||+.++++
T Consensus        78 vG~~v~~~~~GdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~G~~aeyv~v~~~  157 (378)
T PLN02827         78 IGEGVTEFEKGDHVLTVFTGECGSCRHCISGKSNMCQVLGLERKGVMHSDQKTRFSIKGKPVYHYCAVSSFSEYTVVHSG  157 (378)
T ss_pred             cCCCCcccCCCCEEEEecCCCCCCChhhhCcCcccccCccccccccccCCCcccccccCcccccccccccceeeEEechh
Confidence            99999999999999999888999999999999999987532110                    0124899999999999


Q ss_pred             ceEECCCCCCccchhhhh-hhHHHHHHH-HHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHc
Q 017916          148 LCFKLPDNVSLEEGAMCE-PLSVGLHAC-RRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKEL  225 (364)
Q Consensus       148 ~~~~lP~~~~~~~aa~~~-~~~~a~~~l-~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~l  225 (364)
                      .++++|+++++++++.+. .+.++|+++ +.+++++|++|||+|+|++|++++|+|+++|++.|++++.+++|.++++++
T Consensus       158 ~~~~iP~~l~~~~aa~l~~~~~~a~~~~~~~~~~~~g~~VlV~G~G~vG~~~iqlak~~G~~~vi~~~~~~~~~~~a~~l  237 (378)
T PLN02827        158 CAVKVDPLAPLHKICLLSCGVAAGLGAAWNVADVSKGSSVVIFGLGTVGLSVAQGAKLRGASQIIGVDINPEKAEKAKTF  237 (378)
T ss_pred             heEECCCCCCHHHhhhhcchhHhhHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHc
Confidence            999999999998888665 667788776 558899999999999999999999999999997788888899999999999


Q ss_pred             CCCeEEecCCCcccHHHHHHHHHHHcCCCccEEEECCCCHHHHHHHHHhcccC-CEEEEEcCCCCCccccc-hhhhhcCc
Q 017916          226 GADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAG-GKVCLVGMGHHEMTVPL-TPAAVREV  303 (364)
Q Consensus       226 g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~-~~~~~~~~  303 (364)
                      |++.++++.+..+++.+.++++.   ++++|++||++|....+..+++.++++ |+++.+|.......+.. ..++.+++
T Consensus       238 Ga~~~i~~~~~~~~~~~~v~~~~---~~g~d~vid~~G~~~~~~~~l~~l~~g~G~iv~~G~~~~~~~~~~~~~~~~~~~  314 (378)
T PLN02827        238 GVTDFINPNDLSEPIQQVIKRMT---GGGADYSFECVGDTGIATTALQSCSDGWGLTVTLGVPKAKPEVSAHYGLFLSGR  314 (378)
T ss_pred             CCcEEEcccccchHHHHHHHHHh---CCCCCEEEECCCChHHHHHHHHhhccCCCEEEEECCcCCCccccccHHHHhcCc
Confidence            99988876543345666666654   348999999999877889999999998 99999997543333333 34677899


Q ss_pred             EEEeeccC----CCcHHHHHHHHHcCCCCCCCceEEEeeCChhhHHHHHHHHhcCCCceEEEEeC
Q 017916          304 DVVGVFRY----KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  364 (364)
Q Consensus       304 ~~~~~~~~----~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  364 (364)
                      ++.|....    ...+.++++++++|++++.+.++++|+|  +++.+|++.+++++. +|+||.+
T Consensus       315 ~i~g~~~~~~~~~~~~~~~~~~~~~g~i~~~~~i~~~~~l--e~~~~A~~~~~~~~~-~k~vi~~  376 (378)
T PLN02827        315 TLKGSLFGGWKPKSDLPSLVDKYMNKEIMIDEFITHNLSF--DEINKAFELMREGKC-LRCVIHM  376 (378)
T ss_pred             eEEeeecCCCchhhhHHHHHHHHHcCCCChHHheEEEecH--HHHHHHHHHHHCCCc-eEEEEEe
Confidence            99987653    3478899999999999665588999999  999999999998866 6999864

>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

Probab=100.00  E-value=7.3e-49  Score=356.67  Aligned_cols=310  Identities=33%  Similarity=0.441  Sum_probs=260.5

Q ss_pred             ceeEEEe---cCCceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCCCCCC
Q 017916           18 NMAAWLL---GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT   94 (364)
Q Consensus        18 ~~~~~~~---~~~~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~   94 (364)
                      |+++++.   +++.+++.+.|.|.+++|||+|||+++++||.|+..++|.  .....++|+++|.|++|+|+++|++|+.
T Consensus         1 mka~~~~~~g~~~~l~~~e~~~P~p~~geVlVrV~a~gvN~~D~~~r~G~--~~~~~~~P~i~G~d~aG~V~avG~~V~~   78 (326)
T COG0604           1 MKAVVVEEFGGPEVLKVVEVPEPEPGPGEVLVRVKAAGVNPIDVLVRQGL--APPVRPLPFIPGSEAAGVVVAVGSGVTG   78 (326)
T ss_pred             CeEEEEeccCCCceeEEEecCCCCCCCCeEEEEEEEeecChHHHHhccCC--CCCCCCCCCcccceeEEEEEEeCCCCCC
Confidence            4566655   4556999999999999999999999999999999999985  2223568999999999999999999999


Q ss_pred             CCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCccchhhhh-hhHHHHHH
Q 017916           95 LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHA  173 (364)
Q Consensus        95 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~lP~~~~~~~aa~~~-~~~~a~~~  173 (364)
                      |++||+|+... ..                        ...|+|+||+.+++++++++|+++++++||+++ .+.|||++
T Consensus        79 ~~~GdrV~~~~-~~------------------------~~~G~~AEy~~v~a~~~~~~P~~ls~~eAAal~~~~~TA~~~  133 (326)
T COG0604          79 FKVGDRVAALG-GV------------------------GRDGGYAEYVVVPADWLVPLPDGLSFEEAAALPLAGLTAWLA  133 (326)
T ss_pred             cCCCCEEEEcc-CC------------------------CCCCcceeEEEecHHHceeCCCCCCHHHHHHHHHHHHHHHHH
Confidence            99999999752 00                        046999999999999999999999999999886 89999999


Q ss_pred             HH-HcCCCCCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHc
Q 017916          174 CR-RANIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAM  251 (364)
Q Consensus       174 l~-~~~~~~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~  251 (364)
                      +. ..++++|++|||+|+ |++|.+++||||++|+ .++++.+++++.++++++|++++++|.+  ++|.+.+++++.  
T Consensus       134 l~~~~~l~~g~~VLV~gaaGgVG~~aiQlAk~~G~-~~v~~~~s~~k~~~~~~lGAd~vi~y~~--~~~~~~v~~~t~--  208 (326)
T COG0604         134 LFDRAGLKPGETVLVHGAAGGVGSAAIQLAKALGA-TVVAVVSSSEKLELLKELGADHVINYRE--EDFVEQVRELTG--  208 (326)
T ss_pred             HHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-cEEEEecCHHHHHHHHhcCCCEEEcCCc--ccHHHHHHHHcC--
Confidence            95 488999999999987 9999999999999998 4555557777777999999999999754  569999988763  


Q ss_pred             CCCccEEEECCCCHHHHHHHHHhcccCCEEEEEcCCC--CCccccchhhhhcCcEEEeeccC-------CCcHHHHHHHH
Q 017916          252 GTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGH--HEMTVPLTPAAVREVDVVGVFRY-------KNTWPLCLELL  322 (364)
Q Consensus       252 ~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~--~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~l  322 (364)
                      +.++|+|||++| .+.+..++++|+++|+++.+|...  .....+...+..+.+...+....       .+.++++.+++
T Consensus       209 g~gvDvv~D~vG-~~~~~~~l~~l~~~G~lv~ig~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~  287 (326)
T COG0604         209 GKGVDVVLDTVG-GDTFAASLAALAPGGRLVSIGALSGGPPVPLNLLPLLGKRLTLRGVTLGSRDPEALAEALAELFDLL  287 (326)
T ss_pred             CCCceEEEECCC-HHHHHHHHHHhccCCEEEEEecCCCCCccccCHHHHhhccEEEEEecceecchHHHHHHHHHHHHHH
Confidence            568999999999 788899999999999999999654  33345566677788888887665       24677899999


Q ss_pred             HcCCCCCCCceEEEeeCChhhHHHHHHHHhc-CCCceEEEEeC
Q 017916          323 RSGKIDVKPLVTHRFGFSQKEVEEAFETSAR-GGTAIKVMFNL  364 (364)
Q Consensus       323 ~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~-~~~~gkvvv~~  364 (364)
                      ++|++  ++.+.++|+|  ++..++..+... ++..||+|+++
T Consensus       288 ~~g~l--~~~i~~~~~l--~e~~~a~a~~~~~~~~~GKvvl~~  326 (326)
T COG0604         288 ASGKL--KPVIDRVYPL--AEAPAAAAHLLLERRTTGKVVLKV  326 (326)
T ss_pred             HcCCC--cceeccEech--hhhHHHHHHHHcccCCcceEEEeC
Confidence            99999  8888899999  885555444333 58999999975

>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase

Probab=100.00  E-value=8e-48  Score=358.22  Aligned_cols=336  Identities=28%  Similarity=0.478  Sum_probs=283.3

Q ss_pred             cceeEEEecCC-ceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCCCCCCC
Q 017916           17 VNMAAWLLGVN-TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTL   95 (364)
Q Consensus        17 ~~~~~~~~~~~-~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~   95 (364)
                      +|+++++..+. ++++++.|.|+++++||+|||.++++|++|+..+.|...    ..+|.++|||++|+|+++|+++++|
T Consensus         1 ~mka~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~gi~~~D~~~~~g~~~----~~~p~i~G~e~~G~V~~vG~~v~~~   76 (358)
T TIGR03451         1 TVRGVIARSKGAPVELETIVVPDPGPGEVIVDIQACGVCHTDLHYREGGIN----DEFPFLLGHEAAGVVEAVGEGVTDV   76 (358)
T ss_pred             CcEEEEEccCCCCCEEEEEECCCCCCCeEEEEEEEEeecHHHHHHhcCCcc----ccCCcccccceEEEEEEeCCCCccc
Confidence            47888888664 589999999999999999999999999999998877432    3578999999999999999999999


Q ss_pred             CCCCEEEEcCCcCCCCCccccCCCCCCCCCcccc--------cc----CCCCCcceeEEEecCCceEECCCCCCccchhh
Q 017916           96 VPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFF--------AT----PPVHGSLANQVVHPADLCFKLPDNVSLEEGAM  163 (364)
Q Consensus        96 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~----~~~~g~~~~~v~~~~~~~~~lP~~~~~~~aa~  163 (364)
                      ++||+|++.+...|..|.+|+.++.++|.+....        +.    ....|+|+||+.+++++++++|+++++++|++
T Consensus        77 ~~GdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~ip~~~~~~~aa~  156 (358)
T TIGR03451        77 APGDYVVLNWRAVCGQCRACKRGRPWYCFDTHNATQKMTLTDGTELSPALGIGAFAEKTLVHAGQCTKVDPAADPAAAGL  156 (358)
T ss_pred             CCCCEEEEccCCCCCCChHHhCcCcccCcCccccccccccccCcccccccccccccceEEEehhheEECCCCCChhHhhh
Confidence            9999999999999999999999999999753211        00    01259999999999999999999999988887


Q ss_pred             hh-hhHHHHHHH-HHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHH
Q 017916          164 CE-PLSVGLHAC-RRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIA  241 (364)
Q Consensus       164 ~~-~~~~a~~~l-~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~  241 (364)
                      +. .+.++|+++ +.+++++|++|||+|+|++|++++|+|+.+|+++|++++++++|.++++++|++.++++..  +++.
T Consensus       157 l~~~~~ta~~~~~~~~~~~~g~~VlV~G~g~vG~~a~~~ak~~G~~~Vi~~~~~~~~~~~~~~~Ga~~~i~~~~--~~~~  234 (358)
T TIGR03451       157 LGCGVMAGLGAAVNTGGVKRGDSVAVIGCGGVGDAAIAGAALAGASKIIAVDIDDRKLEWAREFGATHTVNSSG--TDPV  234 (358)
T ss_pred             hcccchhhHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEEcCCC--cCHH
Confidence            75 677888776 5688999999999998999999999999999977889989999999999999988887543  5666


Q ss_pred             HHHHHHHHHcCCCccEEEECCCCHHHHHHHHHhcccCCEEEEEcCCCCC--ccccchhhhhcCcEEEeeccC----CCcH
Q 017916          242 EEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHE--MTVPLTPAAVREVDVVGVFRY----KNTW  315 (364)
Q Consensus       242 ~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~--~~~~~~~~~~~~~~~~~~~~~----~~~~  315 (364)
                      +.+++..  .+.++|++|||+|++..+..++++++++|+++.+|.....  ..++...+..+++++.+.+..    .+.+
T Consensus       235 ~~i~~~~--~~~g~d~vid~~g~~~~~~~~~~~~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~  312 (358)
T TIGR03451       235 EAIRALT--GGFGADVVIDAVGRPETYKQAFYARDLAGTVVLVGVPTPDMTLELPLLDVFGRGGALKSSWYGDCLPERDF  312 (358)
T ss_pred             HHHHHHh--CCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEECCCCCCceeeccHHHHhhcCCEEEEeecCCCCcHHHH
Confidence            6666553  2457999999999878899999999999999999965332  334444567788888887532    4678


Q ss_pred             HHHHHHHHcCCCCCCCceEEEeeCChhhHHHHHHHHhcCCCceEEEEe
Q 017916          316 PLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFN  363 (364)
Q Consensus       316 ~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~  363 (364)
                      +++++++++|++++.+.++++|++  +++++|++.+++++.. |+++.
T Consensus       313 ~~~~~l~~~g~l~~~~~i~~~~~l--~~~~~A~~~~~~~~~~-k~~~~  357 (358)
T TIGR03451       313 PMLVDLYLQGRLPLDAFVTERIGL--DDVEEAFDKMHAGDVL-RSVVE  357 (358)
T ss_pred             HHHHHHHHcCCCCchheEEEEecH--HHHHHHHHHHhCCCcc-eeEEe
Confidence            899999999999777788999999  9999999999888665 77765

Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione.

>PLN02702 L-idonate 5-dehydrogenase

Probab=100.00  E-value=3.3e-47  Score=355.06  Aligned_cols=363  Identities=88%  Similarity=1.410  Sum_probs=308.2

Q ss_pred             CCCCCCCccccccchhcceeEEEecCCceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccc
Q 017916            1 MGKGGMSQGEKEDGEEVNMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHE   80 (364)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e   80 (364)
                      ||+++|++.+-.--.+.++++|+.+++.+++.+.+.|.+.++||+|||.++++|+.|+....+...+.+....|.++|+|
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~ev~Ikv~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e   80 (364)
T PLN02702          1 MGKGGMSSGEGSGVEEENMAAWLVGVNTLKIQPFKLPPLGPHDVRVRMKAVGICGSDVHYLKTMRCADFVVKEPMVIGHE   80 (364)
T ss_pred             CCCCccccCCCcccccccceEEEecCCceEEEeccCCCCCCCeEEEEEEEEEEchhhhHHHcCCCCccccCCCCcccccc
Confidence            99999999987767777888999999999999999998999999999999999999999887633222223457899999


Q ss_pred             eeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCccc
Q 017916           81 CAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEE  160 (364)
Q Consensus        81 ~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~lP~~~~~~~  160 (364)
                      ++|+|+++|+++++|++||+|++.+..+|++|..|..+..++|.+..+++....+|+|++|+.++.++++++|+++++++
T Consensus        81 ~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~c~~~~~~~~~~~~g~~~~y~~v~~~~~~~~P~~l~~~~  160 (364)
T PLN02702         81 CAGIIEEVGSEVKHLVVGDRVALEPGISCWRCNLCKEGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPENVSLEE  160 (364)
T ss_pred             eeEEEEEECCCCCCCCCCCEEEEcCCCCCCCCcchhCcCcccCCCccccCCCCCCCcccceEEcchHHeEECCCCCCHHH
Confidence            99999999999999999999999999999999999999999998865554334579999999999999999999999998


Q ss_pred             hhhhhhhHHHHHHHHHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccH
Q 017916          161 GAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDI  240 (364)
Q Consensus       161 aa~~~~~~~a~~~l~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~  240 (364)
                      +++..++++++++++..++.+|++|||+|+|++|++++|+|+++|++.+++++.++++.++++++|++..++++....++
T Consensus       161 aa~~~~~~~a~~~~~~~~~~~g~~vlI~g~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~  240 (364)
T PLN02702        161 GAMCEPLSVGVHACRRANIGPETNVLVMGAGPIGLVTMLAARAFGAPRIVIVDVDDERLSVAKQLGADEIVLVSTNIEDV  240 (364)
T ss_pred             HhhhhHHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEEecCcccccH
Confidence            88655666788888778899999999998899999999999999998788888889999999999999887765444567


Q ss_pred             HHHHHHHHHHcCCCccEEEECCCCHHHHHHHHHhcccCCEEEEEcCCCCCccccchhhhhcCcEEEeeccCCCcHHHHHH
Q 017916          241 AEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKNTWPLCLE  320 (364)
Q Consensus       241 ~~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  320 (364)
                      .+.++.+....+.++|++||++|++..+...+++|+++|+++.+|...............+++++.+.+.....++.+++
T Consensus       241 ~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~  320 (364)
T PLN02702        241 ESEVEEIQKAMGGGIDVSFDCVGFNKTMSTALEATRAGGKVCLVGMGHNEMTVPLTPAAAREVDVVGVFRYRNTWPLCLE  320 (364)
T ss_pred             HHHHHHHhhhcCCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEccCCCCCcccHHHHHhCccEEEEeccChHHHHHHHH
Confidence            77776654334568999999999778899999999999999999854333334555677888999988776678899999


Q ss_pred             HHHcCCCCCCCceEEEeeCChhhHHHHHHHHhcCCCceEEEEe
Q 017916          321 LLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFN  363 (364)
Q Consensus       321 ~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~  363 (364)
                      +++++.+.+.+.+.+.|+++.+++++|++.+.++...+|+++.
T Consensus       321 ~~~~~~l~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~~kvv~~  363 (364)
T PLN02702        321 FLRSGKIDVKPLITHRFGFSQKEVEEAFETSARGGNAIKVMFN  363 (364)
T ss_pred             HHHcCCCCchHheEEEeccChHHHHHHHHHHhcCCCceEEEEe
Confidence            9999998655567788777668999999999988888999985

>TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase

Probab=100.00  E-value=2.3e-47  Score=356.01  Aligned_cols=337  Identities=27%  Similarity=0.413  Sum_probs=277.1

Q ss_pred             ceeEEEec-CCceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCCCCCCCC
Q 017916           18 NMAAWLLG-VNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLV   96 (364)
Q Consensus        18 ~~~~~~~~-~~~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~   96 (364)
                      |+++.+.. .+.++++++|.|+++++||+|||.++++|++|++.+.|.+..   ..+|.++|||++|+|+++|++++.|+
T Consensus         2 ~~a~~~~~~~~~l~~~~~~~P~~~~~eVlI~v~a~gi~~sD~~~~~g~~~~---~~~p~i~GhE~~G~V~~vG~~v~~~~   78 (368)
T TIGR02818         2 SRAAVAWAAGQPLKIEEVDVEMPQKGEVLVRIVATGVCHTDAFTLSGADPE---GVFPVILGHEGAGIVEAVGEGVTSVK   78 (368)
T ss_pred             ceEEEEecCCCCeEEEEecCCCCCCCeEEEEEEEecccHHHHHHhcCCCCC---CCCCeeeccccEEEEEEECCCCccCC
Confidence            56666654 467999999999999999999999999999999988875421   35789999999999999999999999


Q ss_pred             CCCEEEEcCCcCCCCCccccCCCCCCCCCcccc---cc-----------------CCCCCcceeEEEecCCceEECCCCC
Q 017916           97 PGDRVALEPGISCWRCDHCKGGRYNLCPEMKFF---AT-----------------PPVHGSLANQVVHPADLCFKLPDNV  156 (364)
Q Consensus        97 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-----------------~~~~g~~~~~v~~~~~~~~~lP~~~  156 (364)
                      +||+|++.+..+|..|.+|+.++.++|.+....   +.                 ....|+|+||+.+++++++++|+++
T Consensus        79 ~GdrV~~~~~~~cg~C~~c~~g~~~~C~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~lP~~l  158 (368)
T TIGR02818        79 VGDHVIPLYTAECGECKFCLSGKTNLCVAVRETQGKGLMPDGTSRFSKDGQPIYHYMGCSTFSEYTVVPEISLAKINPAA  158 (368)
T ss_pred             CCCEEEEcCCCCCCCChhhhCCCcccccCcccccccccccCCccccccCCCcccccccCccceeeEEechhheEECCCCC
Confidence            999999998889999999999999999875311   00                 0024799999999999999999999


Q ss_pred             Cccchhhhh-hhHHHHHHH-HHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecC
Q 017916          157 SLEEGAMCE-PLSVGLHAC-RRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVS  234 (364)
Q Consensus       157 ~~~~aa~~~-~~~~a~~~l-~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~  234 (364)
                      ++++++.+. ++.+||+++ +.+++++|++|||+|+|++|++++|+|+.+|++.|++++.+++|.++++++|++.++++.
T Consensus       159 ~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlV~G~G~iG~~a~q~Ak~~G~~~Vi~~~~~~~~~~~a~~~Ga~~~i~~~  238 (368)
T TIGR02818       159 PLEEVCLLGCGVTTGIGAVLNTAKVEEGDTVAVFGLGGIGLSVIQGARMAKASRIIAIDINPAKFELAKKLGATDCVNPN  238 (368)
T ss_pred             CHHHhhhhcchhHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCCeEEccc
Confidence            999988776 888999998 568899999999999999999999999999997788888999999999999999888765


Q ss_pred             CCcccHHHHHHHHHHHcCCCccEEEECCCCHHHHHHHHHhcccC-CEEEEEcCCCC--CccccchhhhhcCcEEEeeccC
Q 017916          235 TNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAG-GKVCLVGMGHH--EMTVPLTPAAVREVDVVGVFRY  311 (364)
Q Consensus       235 ~~~~~~~~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~--~~~~~~~~~~~~~~~~~~~~~~  311 (364)
                      +..+++.+.++++.   ++++|++|||+|++..+..++++++++ |+++.+|....  ........+. +...+.+....
T Consensus       239 ~~~~~~~~~v~~~~---~~g~d~vid~~G~~~~~~~~~~~~~~~~G~~v~~g~~~~~~~~~~~~~~~~-~~~~~~g~~~~  314 (368)
T TIGR02818       239 DYDKPIQEVIVEIT---DGGVDYSFECIGNVNVMRAALECCHKGWGESIIIGVAGAGQEISTRPFQLV-TGRVWRGSAFG  314 (368)
T ss_pred             ccchhHHHHHHHHh---CCCCCEEEECCCCHHHHHHHHHHhhcCCCeEEEEeccCCCCcccccHHHHh-ccceEEEeecc
Confidence            43345556666554   248999999999888889999999886 99999986432  2222222233 23345555432


Q ss_pred             ----CCcHHHHHHHHHcCCCCCCCceEEEeeCChhhHHHHHHHHhcCCCceEEEEeC
Q 017916          312 ----KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  364 (364)
Q Consensus       312 ----~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  364 (364)
                          ...+.+++++++++++++.+.+++.|+|  +++++|++.++++. ..|+++++
T Consensus       315 ~~~~~~~~~~~~~~~~~g~i~~~~~it~~~~l--~~~~~A~~~~~~~~-~~k~~v~~  368 (368)
T TIGR02818       315 GVKGRTELPGIVEQYMKGEIALDDFVTHTMPL--EDINEAFDLMHEGK-SIRTVIHY  368 (368)
T ss_pred             CCCcHHHHHHHHHHHHCCCCCchhheeEEecH--HHHHHHHHHHhCCC-ceeEEeeC
Confidence                4568999999999999777889999999  99999999998875 46999874

The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols.

>PRK10309 galactitol-1-phosphate dehydrogenase; Provisional

Probab=100.00  E-value=3.1e-47  Score=353.07  Aligned_cols=335  Identities=30%  Similarity=0.523  Sum_probs=283.2

Q ss_pred             ceeEEEecCCceEEEEecCCCC-CCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCCCCCCCC
Q 017916           18 NMAAWLLGVNTLKIQPFELPSL-GPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLV   96 (364)
Q Consensus        18 ~~~~~~~~~~~~~~~~~~~p~~-~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~   96 (364)
                      |+++++.++..+++.+.|.|++ +++||+|||.++++|++|+..+.... .   ..+|.++|+|++|+|+++|+++++|+
T Consensus         1 Mka~~~~~~~~~~~~~~~~P~~~~~~evlV~v~~~gi~~~D~~~~~~~~-~---~~~p~i~G~e~~G~V~~vG~~v~~~~   76 (347)
T PRK10309          1 MKSVVNDTDGIVRVAESPIPEIKHQDDVLVKVASSGLCGSDIPRIFKNG-A---HYYPITLGHEFSGYVEAVGSGVDDLH   76 (347)
T ss_pred             CceEEEeCCCceEEEECCCCCCCCCCEEEEEEEEEEEchhcHHHHhCCC-C---CCCCcccccceEEEEEEeCCCCCCCC
Confidence            4688888888899999999997 58999999999999999987543211 0   23588999999999999999999999


Q ss_pred             CCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCccchhhhhhhHHHHHHHHH
Q 017916           97 PGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRR  176 (364)
Q Consensus        97 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~lP~~~~~~~aa~~~~~~~a~~~l~~  176 (364)
                      +||+|++.+..+|+.|++|..++.++|.+....+. ...|+|+||+.+++++++++|+++++++|+++.++++++++++.
T Consensus        77 vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~g~-~~~G~~aey~~v~~~~~~~lP~~~s~~~aa~~~~~~~~~~~~~~  155 (347)
T PRK10309         77 PGDAVACVPLLPCFTCPECLRGFYSLCAKYDFIGS-RRDGGNAEYIVVKRKNLFALPTDMPIEDGAFIEPITVGLHAFHL  155 (347)
T ss_pred             CCCEEEECCCcCCCCCcchhCcCcccCCCcceecc-CCCCccceeEEeehHHeEECcCCCCHHHhhhhhHHHHHHHHHHh
Confidence            99999999999999999999999999988765543 45799999999999999999999999998877667778888877


Q ss_pred             cCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcCCCcc
Q 017916          177 ANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGID  256 (364)
Q Consensus       177 ~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d  256 (364)
                      ..+++|++|||+|+|++|++++|+|+++|++.+++++.++++.++++++|++.+++++.  .+ .+.+.++.  .+.++|
T Consensus       156 ~~~~~g~~vlV~G~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~Ga~~~i~~~~--~~-~~~~~~~~--~~~~~d  230 (347)
T PRK10309        156 AQGCEGKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDINSEKLALAKSLGAMQTFNSRE--MS-APQIQSVL--RELRFD  230 (347)
T ss_pred             cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCceEecCcc--cC-HHHHHHHh--cCCCCC
Confidence            88899999999988999999999999999977888888999999999999988877543  23 33444443  245788


Q ss_pred             -EEEECCCCHHHHHHHHHhcccCCEEEEEcCCCCCcccc---chhhhhcCcEEEeeccC------CCcHHHHHHHHHcCC
Q 017916          257 -VSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVP---LTPAAVREVDVVGVFRY------KNTWPLCLELLRSGK  326 (364)
Q Consensus       257 -~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~---~~~~~~~~~~~~~~~~~------~~~~~~~~~~l~~g~  326 (364)
                       ++|||+|....+..++++|+++|+++.+|.......++   ...+..+++++.+.+..      .+.++++++++++|.
T Consensus       231 ~~v~d~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~g~  310 (347)
T PRK10309        231 QLILETAGVPQTVELAIEIAGPRAQLALVGTLHHDLHLTSATFGKILRKELTVIGSWMNYSSPWPGQEWETASRLLTERK  310 (347)
T ss_pred             eEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCCCcccChhhhhHHhhcCcEEEEEeccccCCcchhHHHHHHHHHHcCC
Confidence             99999998889999999999999999998654332222   23466788999987643      357889999999999


Q ss_pred             CCCCCceEEEeeCChhhHHHHHHHHhcCCCceEEEEeC
Q 017916          327 IDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  364 (364)
Q Consensus       327 ~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  364 (364)
                      +.+.+.+++.|+|  +++++|++.++++...||+++++
T Consensus       311 i~~~~~i~~~~~l--~~~~~A~~~~~~~~~~gKvvv~~  346 (347)
T PRK10309        311 LSLEPLIAHRGSF--ESFAQAVRDLAGNPMPGKVLLQI  346 (347)
T ss_pred             CCchhheEEEeeH--HHHHHHHHHHhcCCcceEEEEeC
Confidence            9777889999999  99999999999998899999875

>COG1063 Tdh Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only]

Probab=100.00  E-value=2.4e-47  Score=351.32  Aligned_cols=337  Identities=36%  Similarity=0.590  Sum_probs=277.0

Q ss_pred             ceeEEEecCC-ceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCc-ccccceeEEEEEeCCCCCCC
Q 017916           18 NMAAWLLGVN-TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPM-VIGHECAGVIEKVGSEVKTL   95 (364)
Q Consensus        18 ~~~~~~~~~~-~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~-~~G~e~~G~V~~vG~~v~~~   95 (364)
                      |++++...+. ..++.+.+.|.++|++|+|||+++|||.+|++.+.+....   ...|. ++|||++|+|+++| .++.+
T Consensus         1 m~a~~~~~~~~~~~~~~~~~p~~~p~~vlVkv~~~gICGSDlh~~~g~~~~---~~~~~~i~GHE~~G~V~evG-~~~~~   76 (350)
T COG1063           1 MKAAVVYVGGGDVRLEEPPPPIPGPGDVLIRVTATGICGSDLHIYRGGEPF---VPPGDIILGHEFVGEVVEVG-VVRGF   76 (350)
T ss_pred             CceeEEEecCCccccccCCCCCCCCCeEEEEEEEEeEchhhhhhccCCCCC---CCCCCcccCccceEEEEEec-cccCC
Confidence            4566666544 4447777777679999999999999999999999875322   23344 99999999999999 77889


Q ss_pred             CCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccC----CCCCcceeEEEecCCceEEC-CCCCCccchhhhhhhHHH
Q 017916           96 VPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATP----PVHGSLANQVVHPADLCFKL-PDNVSLEEGAMCEPLSVG  170 (364)
Q Consensus        96 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~g~~~~~v~~~~~~~~~l-P~~~~~~~aa~~~~~~~a  170 (364)
                      ++||||++.+..+|.+|++|+.+.+++|.+..+++..    ..+|+|+||+.+|.++.+++ |++++.+.|++..+++++
T Consensus        77 ~~GdrVvv~~~~~Cg~C~~C~~G~~~~C~~~~~~g~~~~~~~~~G~~aEyv~vp~~~~~~~~pd~~~~~~aal~epla~~  156 (350)
T COG1063          77 KVGDRVVVEPNIPCGHCRYCRAGEYNLCENPGFYGYAGLGGGIDGGFAEYVRVPADFNLAKLPDGIDEEAAALTEPLATA  156 (350)
T ss_pred             CCCCEEEECCCcCCCCChhHhCcCcccCCCccccccccccCCCCCceEEEEEeccccCeecCCCCCChhhhhhcChhhhh
Confidence            9999999999999999999999999999977655432    26799999999997666665 777777778888899999


Q ss_pred             HHHH-HHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHH-cCCCeEEecCCCcccHHHHHHHHH
Q 017916          171 LHAC-RRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKE-LGADNIVKVSTNLQDIAEEVEKIQ  248 (364)
Q Consensus       171 ~~~l-~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~-lg~~~~~~~~~~~~~~~~~i~~~~  248 (364)
                      +++. .....+++++|+|+|+|++|++++++|+.+|++.|++++.+++|++++++ .+++.+.+. . .++....+.+++
T Consensus       157 ~~~~a~~~~~~~~~~V~V~GaGpIGLla~~~a~~~Ga~~Viv~d~~~~Rl~~A~~~~g~~~~~~~-~-~~~~~~~~~~~t  234 (350)
T COG1063         157 YHGHAERAAVRPGGTVVVVGAGPIGLLAIALAKLLGASVVIVVDRSPERLELAKEAGGADVVVNP-S-EDDAGAEILELT  234 (350)
T ss_pred             hhhhhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCceEEEeCCCHHHHHHHHHhCCCeEeecC-c-cccHHHHHHHHh
Confidence            8884 45555666699999999999999999999999999999999999999999 556554432 2 124444444443


Q ss_pred             HHcCCCccEEEECCCCHHHHHHHHHhcccCCEEEEEcCCCCCc-cccchhhhhcCcEEEeecc-C-CCcHHHHHHHHHcC
Q 017916          249 KAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEM-TVPLTPAAVREVDVVGVFR-Y-KNTWPLCLELLRSG  325 (364)
Q Consensus       249 ~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~-~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~l~~g  325 (364)
                        .+.++|++|||+|+...+.+++++++++|+++.+|...... .++...+..|++++.|... . ...++.+++++.+|
T Consensus       235 --~g~g~D~vie~~G~~~~~~~ai~~~r~gG~v~~vGv~~~~~~~~~~~~~~~kel~l~gs~~~~~~~~~~~~~~ll~~g  312 (350)
T COG1063         235 --GGRGADVVIEAVGSPPALDQALEALRPGGTVVVVGVYGGEDIPLPAGLVVSKELTLRGSLRPSGREDFERALDLLASG  312 (350)
T ss_pred             --CCCCCCEEEECCCCHHHHHHHHHHhcCCCEEEEEeccCCccCccCHHHHHhcccEEEeccCCCCcccHHHHHHHHHcC
Confidence              35689999999999999999999999999999999876655 5667778899999999965 3 56899999999999


Q ss_pred             CCCCCCceEEEeeCChhhHHHHHHHHhcCCC-ceEEEEeC
Q 017916          326 KIDVKPLVTHRFGFSQKEVEEAFETSARGGT-AIKVMFNL  364 (364)
Q Consensus       326 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~-~gkvvv~~  364 (364)
                      ++.+.+.+++.+++  +++++||+.+.+... ..|+++++
T Consensus       313 ~i~~~~lit~~~~~--~~~~~a~~~~~~~~~~~~Kv~i~~  350 (350)
T COG1063         313 KIDPEKLITHRLPL--DDAAEAYELFADRKEEAIKVVLKP  350 (350)
T ss_pred             CCChhHceEeeccH--HHHHHHHHHHHhcCCCeEEEEecC
Confidence            99988888898888  999999999987543 67988864

>cd08301 alcohol_DH_plants Plant alcohol dehydrogenase

Probab=100.00  E-value=6e-47  Score=353.87  Aligned_cols=338  Identities=25%  Similarity=0.439  Sum_probs=280.8

Q ss_pred             cceeEEEec-CCceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCCCCCCC
Q 017916           17 VNMAAWLLG-VNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTL   95 (364)
Q Consensus        17 ~~~~~~~~~-~~~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~   95 (364)
                      +++++++.. ++.+++++.+.|+++++||+|||.++++|++|+..+.|.+.   ...+|.++|||++|+|+++|+++++|
T Consensus         2 ~~ka~~~~~~~~~~~l~~~~~p~~~~~evlIkv~a~gi~~~D~~~~~g~~~---~~~~p~i~G~e~~G~V~~vG~~v~~~   78 (369)
T cd08301           2 TCKAAVAWEAGKPLVIEEVEVAPPQAMEVRIKILHTSLCHTDVYFWEAKGQ---TPLFPRILGHEAAGIVESVGEGVTDL   78 (369)
T ss_pred             ccEEEEEecCCCCcEEEEeeCCCCCCCeEEEEEEEEeeCchhHHHhcCCCC---CCCCCcccccccceEEEEeCCCCCcc
Confidence            577888774 46799999999999999999999999999999998887542   24578999999999999999999999


Q ss_pred             CCCCEEEEcCCcCCCCCccccCCCCCCCCCcccccc---------------------CCCCCcceeEEEecCCceEECCC
Q 017916           96 VPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFAT---------------------PPVHGSLANQVVHPADLCFKLPD  154 (364)
Q Consensus        96 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------~~~~g~~~~~v~~~~~~~~~lP~  154 (364)
                      ++||+|++.+...|..|.+|+.++.++|.+......                     ....|+|+||+.+++++++++|+
T Consensus        79 ~~GdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP~  158 (369)
T cd08301          79 KPGDHVLPVFTGECKECRHCKSEKSNMCDLLRINTDRGVMINDGKSRFSINGKPIYHFVGTSTFSEYTVVHVGCVAKINP  158 (369)
T ss_pred             ccCCEEEEccCCCCCCCchhcCCCcccCcCcccccccccccCCCccccccCCcceeeeeccccceeEEEEecccEEECCC
Confidence            999999999889999999999999999988643200                     01348999999999999999999


Q ss_pred             CCCccchhhhh-hhHHHHHHH-HHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEe
Q 017916          155 NVSLEEGAMCE-PLSVGLHAC-RRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVK  232 (364)
Q Consensus       155 ~~~~~~aa~~~-~~~~a~~~l-~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~  232 (364)
                      ++++++|+++. .+.++|+++ +..++++|++|||+|+|++|++++|+|+.+|+..|+++++++++.++++++|++.+++
T Consensus       159 ~~~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~VlV~G~g~vG~~a~q~ak~~G~~~vi~~~~~~~~~~~~~~~Ga~~~i~  238 (369)
T cd08301         159 EAPLDKVCLLSCGVSTGLGAAWNVAKVKKGSTVAIFGLGAVGLAVAEGARIRGASRIIGVDLNPSKFEQAKKFGVTEFVN  238 (369)
T ss_pred             CCCHHHhhhhcchhhHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEEc
Confidence            99999888775 678899887 5588999999999999999999999999999977888889999999999999988887


Q ss_pred             cCCCcccHHHHHHHHHHHcCCCccEEEECCCCHHHHHHHHHhcccC-CEEEEEcCCCCCccccchh-hhhcCcEEEeecc
Q 017916          233 VSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAG-GKVCLVGMGHHEMTVPLTP-AAVREVDVVGVFR  310 (364)
Q Consensus       233 ~~~~~~~~~~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~-~~~~~~~~~~~~~  310 (364)
                      +.....++.+.++++.   ++++|++|||+|....+..++++++++ |+++.+|.......+.... .+.+++++.+...
T Consensus       239 ~~~~~~~~~~~v~~~~---~~~~d~vid~~G~~~~~~~~~~~~~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~  315 (369)
T cd08301         239 PKDHDKPVQEVIAEMT---GGGVDYSFECTGNIDAMISAFECVHDGWGVTVLLGVPHKDAVFSTHPMNLLNGRTLKGTLF  315 (369)
T ss_pred             ccccchhHHHHHHHHh---CCCCCEEEECCCChHHHHHHHHHhhcCCCEEEEECcCCCCcccccCHHHHhcCCeEEEEec
Confidence            5443235666666554   348999999999888889999999996 9999999654322222222 2346888888754


Q ss_pred             C----CCcHHHHHHHHHcCCCCCCCceEEEeeCChhhHHHHHHHHhcCCCceEEEEe
Q 017916          311 Y----KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFN  363 (364)
Q Consensus       311 ~----~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~  363 (364)
                      .    +..++++++++.++.+++.+.++++|+|  +++++|++.+++++. .|+++.
T Consensus       316 ~~~~~~~~~~~~~~~~~~g~~~~~~~i~~~~~l--~~~~~A~~~~~~~~~-~k~~~~  369 (369)
T cd08301         316 GGYKPKTDLPNLVEKYMKKELELEKFITHELPF--SEINKAFDLLLKGEC-LRCILH  369 (369)
T ss_pred             CCCChHHHHHHHHHHHHcCCCCcHHheeeeecH--HHHHHHHHHHHCCCc-eeEEeC
Confidence            3    3468899999999998777778899999  999999999998875 488873

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the

>TIGR02819 fdhA_non_GSH formaldehyde dehydrogenase, glutathione-independent

Probab=100.00  E-value=2.8e-47  Score=356.74  Aligned_cols=336  Identities=23%  Similarity=0.438  Sum_probs=269.1

Q ss_pred             ceeEEEecCCceEEEEecCCCCC-------CCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCC
Q 017916           18 NMAAWLLGVNTLKIQPFELPSLG-------PYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGS   90 (364)
Q Consensus        18 ~~~~~~~~~~~~~~~~~~~p~~~-------~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~   90 (364)
                      |+++++.++..++++++|.|+++       ++||||||+++|||++|++.+.|.+    ...+|.++|||++|+|+++|+
T Consensus         3 mka~v~~~~~~~~~~e~~~P~~~~~~~~~~~~eVlVkv~a~gIcgsD~~~~~g~~----~~~~p~i~GhE~~G~V~~vG~   78 (393)
T TIGR02819         3 NRGVVYLGPGKVEVQDIDYPKLELPDGRKCEHGVILKVVTTNICGSDQHMVRGRT----TAPTGLVLGHEITGEVIEKGR   78 (393)
T ss_pred             ceEEEEecCCceeEEeccCCcccCCCccCCCCeEEEEEEEeeecHHHHHHHCCCC----CCCCCccccceeEEEEEEEcC
Confidence            67888888889999999999874       6899999999999999999887643    235689999999999999999


Q ss_pred             CCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccc------ccc---CCCCCcceeEEEecCC--ceEECCCCCCc-
Q 017916           91 EVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKF------FAT---PPVHGSLANQVVHPAD--LCFKLPDNVSL-  158 (364)
Q Consensus        91 ~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~---~~~~g~~~~~v~~~~~--~~~~lP~~~~~-  158 (364)
                      +|++|++||||.+.+...|..|.+|..++.++|.+...      ++.   ...+|+|+||+.+++.  +++++|++++. 
T Consensus        79 ~V~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~g~~~~~~~~G~~aey~~v~~~~~~l~~vP~~~~~~  158 (393)
T TIGR02819        79 DVEFIKIGDIVSVPFNIACGRCRNCKEGHTGVCLNVNPARAGAAYGYVDMGGWVGGQSEYVMVPYADFNLLKFPDRDQAL  158 (393)
T ss_pred             ccccccCCCEEEEecccCCCCChHHHCcCcccCcCCCCCCccceecccccCCCCCceEEEEEechhhCceEECCCccccc
Confidence            99999999999998888999999999999999997531      121   1246999999999964  79999998653 


Q ss_pred             ---cchh-hhhhhHHHHHHHHHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecC
Q 017916          159 ---EEGA-MCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVS  234 (364)
Q Consensus       159 ---~~aa-~~~~~~~a~~~l~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~  234 (364)
                         ..++ +..++.++|++++..++++|++|||.|+|++|++++|+|+.+|++++++++.+++|.++++++|++. +++.
T Consensus       159 ~~~~~~a~l~~~~~ta~~a~~~~~~~~g~~VlV~G~G~iG~~aiqlAk~~Ga~~vi~~d~~~~r~~~a~~~Ga~~-v~~~  237 (393)
T TIGR02819       159 EKIRDLTMLSDIFPTGYHGAVTAGVGPGSTVYIAGAGPVGLAAAASAQLLGAAVVIVGDLNPARLAQARSFGCET-VDLS  237 (393)
T ss_pred             ccccceeeeccHHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCceEEEeCCCHHHHHHHHHcCCeE-EecC
Confidence               2233 4458889999998888999999999888999999999999999987777778889999999999974 4432


Q ss_pred             CCcccHHHHHHHHHHHcCCCccEEEECCCCH--------------HHHHHHHHhcccCCEEEEEcCCC-CCc--------
Q 017916          235 TNLQDIAEEVEKIQKAMGTGIDVSFDCAGFN--------------KTMSTALSATRAGGKVCLVGMGH-HEM--------  291 (364)
Q Consensus       235 ~~~~~~~~~i~~~~~~~~~~~d~vid~~g~~--------------~~~~~~~~~l~~~G~~v~~g~~~-~~~--------  291 (364)
                       ...++.+.++++.  .+.++|++|||+|.+              ..++++++.++++|+++.+|... ...        
T Consensus       238 -~~~~~~~~v~~~~--~~~g~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~i~~~G~~~~~~~~~~~~~~~  314 (393)
T TIGR02819       238 -KDATLPEQIEQIL--GEPEVDCAVDCVGFEARGHGHDGKKEAPATVLNSLMEVTRVGGAIGIPGLYVTEDPGAVDAAAK  314 (393)
T ss_pred             -CcccHHHHHHHHc--CCCCCcEEEECCCCccccccccccccchHHHHHHHHHHhhCCCEEEEeeecCCccccccccccc
Confidence             2235666666543  245799999999975              47899999999999999999742 111        


Q ss_pred             ----cccchhhhhcCcEEEeeccCC-CcHHHHHHHHHcCCCCCCCceE-EEeeCChhhHHHHHHHHhcCCCceEEEEeC
Q 017916          292 ----TVPLTPAAVREVDVVGVFRYK-NTWPLCLELLRSGKIDVKPLVT-HRFGFSQKEVEEAFETSARGGTAIKVMFNL  364 (364)
Q Consensus       292 ----~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~g~~~~~~~~~-~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  364 (364)
                          .+.....+.+++++.+..... +.+.++++++++|++++.++++ ++|+|  +++++||+.+.++. .+|+++++
T Consensus       315 ~~~~~i~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~g~i~~~~~i~~~~~~l--~~~~~a~~~~~~~~-~~Kvvi~~  390 (393)
T TIGR02819       315 TGSLSIRFGLGWAKSHSFHTGQTPVMKYNRNLMQAILHDRVQIAKAVNVTVISL--DDAPEGYAEFDAGA-AKKFVIDP  390 (393)
T ss_pred             ccccccchHHhhccCceEEeccCChhhhHHHHHHHHHcCCCCHHHceecceecH--HHHHHHHHHHhhCC-ceEEEEeC
Confidence                111223445566666643322 3347899999999997766676 78999  99999999998874 58999864

Members of this family represent a distinct clade within the larger family of zinc-dependent dehydrogenases of medium chain alcohols, a family that also includes the so-called glutathione-dependent formaldehyde dehydrogenase. Members of this protein family have a tightly bound NAD that can act as a true cofactor, rather than a cosubstrate in dehydrogenase reactions, in dismutase reactions for some aldehydes. The name given to this family, however, is formaldehyde dehydrogenase, glutathione-independent.

>PLN02586 probable cinnamyl alcohol dehydrogenase

Probab=100.00  E-value=5.8e-47  Score=351.97  Aligned_cols=337  Identities=22%  Similarity=0.347  Sum_probs=270.5

Q ss_pred             cccccchhcceeEEEe-cCCceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEE
Q 017916            9 GEKEDGEEVNMAAWLL-GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEK   87 (364)
Q Consensus         9 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~   87 (364)
                      ++.+++++. .++... ..+.+++.+.+.|.++++||+|||.++++|++|++.+.|.+.   ...+|.++|||++|+|++
T Consensus         5 ~~~~~~~~~-~~~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~gic~sD~~~~~g~~~---~~~~p~i~GhE~~G~V~~   80 (360)
T PLN02586          5 PEEEHPQKA-FGWAARDPSGVLSPFHFSRRENGDEDVTVKILYCGVCHSDLHTIKNEWG---FTRYPIVPGHEIVGIVTK   80 (360)
T ss_pred             hhhhchhhe-eEEEecCCCCCceEEeecCCCCCCCeEEEEEEEecCChhhHhhhcCCcC---CCCCCccCCcceeEEEEE
Confidence            333433333 344444 457889999999999999999999999999999998876432   135689999999999999


Q ss_pred             eCCCCCCCCCCCEEEEcCC-cCCCCCccccCCCCCCCCCccccc------cCCCCCcceeEEEecCCceEECCCCCCccc
Q 017916           88 VGSEVKTLVPGDRVALEPG-ISCWRCDHCKGGRYNLCPEMKFFA------TPPVHGSLANQVVHPADLCFKLPDNVSLEE  160 (364)
Q Consensus        88 vG~~v~~~~~Gd~V~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~g~~~~~v~~~~~~~~~lP~~~~~~~  160 (364)
                      +|+++++|++||+|+..+. ..|..|.+|..+++++|++..+..      ....+|+|+||+.+++++++++|+++++++
T Consensus        81 vG~~v~~~~vGdrV~~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~lP~~ls~~~  160 (360)
T PLN02586         81 LGKNVKKFKEGDRVGVGVIVGSCKSCESCDQDLENYCPKMIFTYNSIGHDGTKNYGGYSDMIVVDQHFVLRFPDNLPLDA  160 (360)
T ss_pred             ECCCCCccCCCCEEEEccccCcCCCCccccCCCcccCCCccccccccccCCCcCCCccceEEEEchHHeeeCCCCCCHHH
Confidence            9999999999999986543 579999999999999999865431      123479999999999999999999999999


Q ss_pred             hhhhh-hhHHHHHHHHH-cCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecCh-hHHHHHHHcCCCeEEecCCCc
Q 017916          161 GAMCE-PLSVGLHACRR-ANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDD-YRLSVAKELGADNIVKVSTNL  237 (364)
Q Consensus       161 aa~~~-~~~~a~~~l~~-~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~-~~~~~~~~lg~~~~~~~~~~~  237 (364)
                      |+.+. .+.++|+++.. ..+++|++|||.|+|++|++++|+|+.+|++ +++++.++ ++.++++++|++.++++..  
T Consensus       161 aa~l~~~~~ta~~al~~~~~~~~g~~VlV~G~G~vG~~avq~Ak~~Ga~-vi~~~~~~~~~~~~~~~~Ga~~vi~~~~--  237 (360)
T PLN02586        161 GAPLLCAGITVYSPMKYYGMTEPGKHLGVAGLGGLGHVAVKIGKAFGLK-VTVISSSSNKEDEAINRLGADSFLVSTD--  237 (360)
T ss_pred             hhhhhcchHHHHHHHHHhcccCCCCEEEEECCCHHHHHHHHHHHHCCCE-EEEEeCCcchhhhHHHhCCCcEEEcCCC--
Confidence            88665 67789998854 5578999999999999999999999999995 55555554 4456778999988876432  


Q ss_pred             ccHHHHHHHHHHHcCCCccEEEECCCCHHHHHHHHHhcccCCEEEEEcCCCCCccccchhhhhcCcEEEeeccC-CCcHH
Q 017916          238 QDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY-KNTWP  316 (364)
Q Consensus       238 ~~~~~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~  316 (364)
                      .   +.+++..   + ++|++||++|+...+..++++++++|+++.+|.......++...++.++..+.+.... ...++
T Consensus       238 ~---~~~~~~~---~-~~D~vid~~g~~~~~~~~~~~l~~~G~iv~vG~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~  310 (360)
T PLN02586        238 P---EKMKAAI---G-TMDYIIDTVSAVHALGPLLGLLKVNGKLITLGLPEKPLELPIFPLVLGRKLVGGSDIGGIKETQ  310 (360)
T ss_pred             H---HHHHhhc---C-CCCEEEECCCCHHHHHHHHHHhcCCcEEEEeCCCCCCCccCHHHHHhCCeEEEEcCcCCHHHHH
Confidence            1   2333332   3 6999999999877889999999999999999865444455566667788888777654 45789


Q ss_pred             HHHHHHHcCCCCCCCceEEEeeCChhhHHHHHHHHhcCCCceEEEEeC
Q 017916          317 LCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  364 (364)
Q Consensus       317 ~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  364 (364)
                      ++++++++|++  ++.+ ++|+|  +++++||+.++++...||+|+++
T Consensus       311 ~~~~li~~g~i--~~~~-~~~~l--~~~~~A~~~~~~~~~~gkvvi~~  353 (360)
T PLN02586        311 EMLDFCAKHNI--TADI-ELIRM--DEINTAMERLAKSDVRYRFVIDV  353 (360)
T ss_pred             HHHHHHHhCCC--CCcE-EEEeH--HHHHHHHHHHHcCCCcEEEEEEc
Confidence            99999999999  4444 57999  99999999999998889999874

>cd08300 alcohol_DH_class_III class III alcohol dehydrogenases

Probab=100.00  E-value=1.2e-46  Score=351.43  Aligned_cols=337  Identities=26%  Similarity=0.427  Sum_probs=276.8

Q ss_pred             cceeEEEec-CCceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCCCCCCC
Q 017916           17 VNMAAWLLG-VNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTL   95 (364)
Q Consensus        17 ~~~~~~~~~-~~~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~   95 (364)
                      +++++++.. ++.+++++.|.|+++++||+|||+++++|++|+..+.|.+..   ..+|.++|||++|+|+++|+++++|
T Consensus         2 ~~~a~~~~~~~~~~~~~~~~~P~~~~~eVlIrv~a~gi~~~D~~~~~g~~~~---~~~p~v~G~E~~G~V~~vG~~v~~~   78 (368)
T cd08300           2 TCKAAVAWEAGKPLSIEEVEVAPPKAGEVRIKILATGVCHTDAYTLSGADPE---GLFPVILGHEGAGIVESVGEGVTSV   78 (368)
T ss_pred             cceEEEEecCCCCcEEEEeecCCCCCCEEEEEEEEEEechhhHHHhcCCCcc---CCCCceeccceeEEEEEeCCCCccC
Confidence            467777664 468999999999999999999999999999999988875421   3578999999999999999999999


Q ss_pred             CCCCEEEEcCCcCCCCCccccCCCCCCCCCcccc---cc-----------------CCCCCcceeEEEecCCceEECCCC
Q 017916           96 VPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFF---AT-----------------PPVHGSLANQVVHPADLCFKLPDN  155 (364)
Q Consensus        96 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-----------------~~~~g~~~~~v~~~~~~~~~lP~~  155 (364)
                      ++||+|++.+..+|..|++|+.++.++|.+....   +.                 ....|+|+||+.+++++++++|++
T Consensus        79 ~vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~~~~g~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP~~  158 (368)
T cd08300          79 KPGDHVIPLYTPECGECKFCKSGKTNLCQKIRATQGKGLMPDGTSRFSCKGKPIYHFMGTSTFSEYTVVAEISVAKINPE  158 (368)
T ss_pred             CCCCEEEEcCCCCCCCChhhcCCCcCcCCCccccccccccCCCccccccCCcccccccccccceeEEEEchhceEeCCCC
Confidence            9999999998899999999999999999875321   00                 002479999999999999999999


Q ss_pred             CCccchhhhh-hhHHHHHHH-HHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEec
Q 017916          156 VSLEEGAMCE-PLSVGLHAC-RRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKV  233 (364)
Q Consensus       156 ~~~~~aa~~~-~~~~a~~~l-~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~  233 (364)
                      +++++|+.+. .+.+||+++ +.+++++|++|||+|+|++|++++|+|+++|++.|++++.+++|.++++++|+++++++
T Consensus       159 l~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlV~G~G~vG~~a~~~ak~~G~~~vi~~~~~~~~~~~~~~lGa~~~i~~  238 (368)
T cd08300         159 APLDKVCLLGCGVTTGYGAVLNTAKVEPGSTVAVFGLGAVGLAVIQGAKAAGASRIIGIDINPDKFELAKKFGATDCVNP  238 (368)
T ss_pred             CChhhhhhhccchhhhHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCCEEEcc
Confidence            9999988776 788999987 56889999999999889999999999999999778888899999999999999998876


Q ss_pred             CCCcccHHHHHHHHHHHcCCCccEEEECCCCHHHHHHHHHhcccC-CEEEEEcCCCC--CccccchhhhhcCcEEEeecc
Q 017916          234 STNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAG-GKVCLVGMGHH--EMTVPLTPAAVREVDVVGVFR  310 (364)
Q Consensus       234 ~~~~~~~~~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~--~~~~~~~~~~~~~~~~~~~~~  310 (364)
                      .+.++++.+.++++.   ++++|++|||+|+...+..++++++++ |+++.+|....  ........+. +...+.+...
T Consensus       239 ~~~~~~~~~~v~~~~---~~g~d~vid~~g~~~~~~~a~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~-~~~~~~g~~~  314 (368)
T cd08300         239 KDHDKPIQQVLVEMT---DGGVDYTFECIGNVKVMRAALEACHKGWGTSVIIGVAAAGQEISTRPFQLV-TGRVWKGTAF  314 (368)
T ss_pred             cccchHHHHHHHHHh---CCCCcEEEECCCChHHHHHHHHhhccCCCeEEEEccCCCCCccccCHHHHh-hcCeEEEEEe
Confidence            543335777776654   348999999999878889999999886 99999986432  1222222222 2334444432


Q ss_pred             ----CCCcHHHHHHHHHcCCCCCCCceEEEeeCChhhHHHHHHHHhcCCCceEEEEe
Q 017916          311 ----YKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFN  363 (364)
Q Consensus       311 ----~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~  363 (364)
                          ....+.++++++.++++.+.+.++++|+|  +++++||+.++++.. .|++++
T Consensus       315 ~~~~~~~~~~~~~~~~~~g~l~~~~~i~~~~~l--e~~~~A~~~~~~~~~-~k~~~~  368 (368)
T cd08300         315 GGWKSRSQVPKLVEDYMKGKIKVDEFITHTMPL--DEINEAFDLMHAGKS-IRTVVK  368 (368)
T ss_pred             cccCcHHHHHHHHHHHHcCCCChhhceeeeEcH--HHHHHHHHHHhCCCC-ceeeeC
Confidence                25678899999999999766788999999  999999999988754 688874

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim

>cd08233 butanediol_DH_like (2R,3R)-2,3-butanediol dehydrogenase

Probab=100.00  E-value=3.2e-46  Score=346.88  Aligned_cols=340  Identities=36%  Similarity=0.628  Sum_probs=290.3

Q ss_pred             ceeEEEecCCceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhccc-CC-------ccCCCCcccccceeEEEEEeC
Q 017916           18 NMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRC-AD-------FVVKEPMVIGHECAGVIEKVG   89 (364)
Q Consensus        18 ~~~~~~~~~~~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~-~~-------~~~~~p~~~G~e~~G~V~~vG   89 (364)
                      |+++++.+++.+++.+.+.|++.++||+||+.++++|+.|+..+.+... ..       .....|.++|+|++|+|+++|
T Consensus         1 mka~~~~~~~~l~~~~~~~p~~~~~evlV~v~a~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG   80 (351)
T cd08233           1 MKAARYHGRKDIRVEEVPEPPVKPGEVKIKVAWCGICGSDLHEYLDGPIFIPTEGHPHLTGETAPVTLGHEFSGVVVEVG   80 (351)
T ss_pred             CceEEEecCCceEEEeccCCCCCCCeEEEEEEEEEECccchHhhcCCCccccccccccccccCCCceecccceEEEEEeC
Confidence            5678888888899999999999999999999999999999886653211 00       012368999999999999999


Q ss_pred             CCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCccchhhhhhhHH
Q 017916           90 SEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSV  169 (364)
Q Consensus        90 ~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~lP~~~~~~~aa~~~~~~~  169 (364)
                      +++++|++||+|++.+...|..|.+|+.++..+|.+..+.+....+|+|++|+.++.++++++|+++++++++++.++.+
T Consensus        81 ~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~lP~~~~~~~aa~~~~~~t  160 (351)
T cd08233          81 SGVTGFKVGDRVVVEPTIKCGTCGACKRGLYNLCDSLGFIGLGGGGGGFAEYVVVPAYHVHKLPDNVPLEEAALVEPLAV  160 (351)
T ss_pred             CCCCCCCCCCEEEECCCCCCCCChHHhCcCcccCCCCceeccCCCCCceeeEEEechHHeEECcCCCCHHHhhhccHHHH
Confidence            99999999999999988899999999999999999876544333479999999999999999999999998887777889


Q ss_pred             HHHHHHHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHH
Q 017916          170 GLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQK  249 (364)
Q Consensus       170 a~~~l~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~  249 (364)
                      ||++++.+++++|++|||+|+|.+|++++|+|+.+|++.++++++++++.++++++|++.++++..  .++.+.++++. 
T Consensus       161 a~~~l~~~~~~~g~~vlI~g~g~vG~~a~q~a~~~G~~~v~~~~~~~~~~~~~~~~ga~~~i~~~~--~~~~~~l~~~~-  237 (351)
T cd08233         161 AWHAVRRSGFKPGDTALVLGAGPIGLLTILALKAAGASKIIVSEPSEARRELAEELGATIVLDPTE--VDVVAEVRKLT-  237 (351)
T ss_pred             HHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEECCCc--cCHHHHHHHHh-
Confidence            999997788999999999988999999999999999977888888999999999999998887543  56777776654 


Q ss_pred             HcCCCccEEEECCCCHHHHHHHHHhcccCCEEEEEcCCCCCccccchhhhhcCcEEEeeccC-CCcHHHHHHHHHcCCCC
Q 017916          250 AMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY-KNTWPLCLELLRSGKID  328 (364)
Q Consensus       250 ~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~g~~~  328 (364)
                       .++++|++||++|++..+..++++|+++|+++.+|.......++...+..+++++.+.... .+.+++++++++++++.
T Consensus       238 -~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~g~l~  316 (351)
T cd08233         238 -GGGGVDVSFDCAGVQATLDTAIDALRPRGTAVNVAIWEKPISFNPNDLVLKEKTLTGSICYTREDFEEVIDLLASGKID  316 (351)
T ss_pred             -CCCCCCEEEECCCCHHHHHHHHHhccCCCEEEEEccCCCCCccCHHHHHhhCcEEEEEeccCcchHHHHHHHHHcCCCC
Confidence             2456999999999778889999999999999999865444455666677899999988765 68899999999999997


Q ss_pred             CCCceEEEeeCChhhH-HHHHHHHhcCCC-ceEEEEe
Q 017916          329 VKPLVTHRFGFSQKEV-EEAFETSARGGT-AIKVMFN  363 (364)
Q Consensus       329 ~~~~~~~~~~~~~~~~-~~a~~~~~~~~~-~gkvvv~  363 (364)
                      +.+.+.++|++  +++ ++|++.++++.. .||+||.
T Consensus       317 ~~~~i~~~~~l--~e~~~~a~~~~~~~~~~~~k~v~~  351 (351)
T cd08233         317 AEPLITSRIPL--EDIVEKGFEELINDKEQHVKILVS  351 (351)
T ss_pred             hHHheEEEecH--HHHHHHHHHHHHhCCCCceEEEeC
Confidence            66778889999  996 799999998876 4999974

(2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit.

>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase

Probab=100.00  E-value=5.5e-46  Score=344.68  Aligned_cols=332  Identities=24%  Similarity=0.446  Sum_probs=277.2

Q ss_pred             EecCC-ceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCCCCCCCCCCCEE
Q 017916           23 LLGVN-TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRV  101 (364)
Q Consensus        23 ~~~~~-~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V  101 (364)
                      +.++. .+++++.|.|.++++||+|||.++++|++|++.+.+.+..  ...+|.++|||++|+|+++|++++.+ +||+|
T Consensus         4 ~~~~g~~~~~~~~p~P~~~~~evlVrv~~~gic~sD~~~~~~~~~~--~~~~p~i~GhE~~G~V~~vG~~v~~~-~GdrV   80 (349)
T TIGR03201         4 MTEPGKPMVKTRVEIPELGAGDVVVKVAGCGVCHTDLSYYYMGVRT--NHALPLALGHEISGRVIQAGAGAASW-IGKAV   80 (349)
T ss_pred             EecCCCCceEEeccCCCCCCCeEEEEEEEEeecccchHHHcCCCCc--cCCCCeeccccceEEEEEeCCCcCCC-CCCEE
Confidence            44443 4888999999999999999999999999999876443211  13568999999999999999999887 99999


Q ss_pred             EEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCC------CCCccchhhh-hhhHHHHHHH
Q 017916          102 ALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPD------NVSLEEGAMC-EPLSVGLHAC  174 (364)
Q Consensus       102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~lP~------~~~~~~aa~~-~~~~~a~~~l  174 (364)
                      ++.+..+|..|.+|..++.++|.+....+. ..+|+|+||+.+++++++++|+      +++++.++.+ ..+.++|+++
T Consensus        81 ~~~~~~~cg~c~~c~~g~~~~c~~~~~~g~-~~~G~~ae~~~v~~~~~~~ip~~~~~~~~~~~~~~a~~~~~~~ta~~a~  159 (349)
T TIGR03201        81 IVPAVIPCGECELCKTGRGTICRAQKMPGN-DMQGGFASHIVVPAKGLCVVDEARLAAAGLPLEHVSVVADAVTTPYQAA  159 (349)
T ss_pred             EECCCCCCCCChhhhCcCcccCCCCCccCc-CCCCcccceEEechHHeEECCcccccccCCCHHHhhhhcchHHHHHHHH
Confidence            999999999999999999999988766543 3579999999999999999999      8888877765 4888999999


Q ss_pred             HHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCc-ccHHHHHHHHHHHcCC
Q 017916          175 RRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNL-QDIAEEVEKIQKAMGT  253 (364)
Q Consensus       175 ~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~-~~~~~~i~~~~~~~~~  253 (364)
                      +..++++|++|||+|+|++|++++|+|+.+|+ .+++++.+++|.++++++|++.++++.... +++.+.+++++.  +.
T Consensus       160 ~~~~~~~g~~VlV~G~G~vG~~a~~~a~~~G~-~vi~~~~~~~~~~~~~~~Ga~~~i~~~~~~~~~~~~~~~~~t~--~~  236 (349)
T TIGR03201       160 VQAGLKKGDLVIVIGAGGVGGYMVQTAKAMGA-AVVAIDIDPEKLEMMKGFGADLTLNPKDKSAREVKKLIKAFAK--AR  236 (349)
T ss_pred             HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEEcCCHHHHHHHHHhCCceEecCccccHHHHHHHHHhhcc--cC
Confidence            88889999999999999999999999999999 578888899999999999998887754321 245555555532  45


Q ss_pred             Ccc----EEEECCCCHHHHHHHHHhcccCCEEEEEcCCCCCccccchhhhhcCcEEEeeccC-CCcHHHHHHHHHcCCCC
Q 017916          254 GID----VSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY-KNTWPLCLELLRSGKID  328 (364)
Q Consensus       254 ~~d----~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~g~~~  328 (364)
                      ++|    ++|||+|+...++.++++|+++|+++.+|.......++...++.++.++.+.+.. ...++++++++++|++.
T Consensus       237 g~d~~~d~v~d~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~g~i~  316 (349)
T TIGR03201       237 GLRSTGWKIFECSGSKPGQESALSLLSHGGTLVVVGYTMAKTEYRLSNLMAFHARALGNWGCPPDRYPAALDLVLDGKIQ  316 (349)
T ss_pred             CCCCCcCEEEECCCChHHHHHHHHHHhcCCeEEEECcCCCCcccCHHHHhhcccEEEEEecCCHHHHHHHHHHHHcCCCC
Confidence            676    8999999888888999999999999999965444445555666778888887754 56799999999999997


Q ss_pred             CCCceEEEeeCChhhHHHHHHHHhcCCCceEEEEeC
Q 017916          329 VKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  364 (364)
Q Consensus       329 ~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  364 (364)
                      +.+.+ +.|+|  +++++||+.++++...||+++++
T Consensus       317 ~~~~i-~~~~l--~~~~~A~~~~~~~~~~~k~~~~~  349 (349)
T TIGR03201       317 LGPFV-ERRPL--DQIEHVFAAAHHHKLKRRAILTP  349 (349)
T ss_pred             cccce-EEecH--HHHHHHHHHHHcCCccceEEecC
Confidence            65555 47888  99999999999998899999864

Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.

>cd08277 liver_alcohol_DH_like Liver alcohol dehydrogenase

Probab=100.00  E-value=9.7e-46  Score=344.98  Aligned_cols=335  Identities=27%  Similarity=0.470  Sum_probs=279.6

Q ss_pred             ceeEEEec-CCceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCCCCCCCC
Q 017916           18 NMAAWLLG-VNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLV   96 (364)
Q Consensus        18 ~~~~~~~~-~~~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~   96 (364)
                      ++++++.+ .+.+++.+.|.|.++++||+|||+++++|++|++.+.|.+.    ..+|.++|+|++|+|+++|+++++++
T Consensus         3 ~ka~~~~~~~~~~~~~~~~~p~~~~~evlVkv~~~gi~~sD~~~~~g~~~----~~~p~i~G~e~~G~V~~vG~~v~~~~   78 (365)
T cd08277           3 CKAAVAWEAGKPLVIEEIEVAPPKANEVRIKMLATSVCHTDILAIEGFKA----TLFPVILGHEGAGIVESVGEGVTNLK   78 (365)
T ss_pred             cEEEEEccCCCCcEEEEEECCCCCCCEEEEEEEEEeechhhHHHhcCCCC----CCCCeecccceeEEEEeeCCCCccCC
Confidence            56777764 35689999999999999999999999999999998877542    35689999999999999999999999


Q ss_pred             CCCEEEEcCCcCCCCCccccCCCCCCCCCcccccc-------------------CCCCCcceeEEEecCCceEECCCCCC
Q 017916           97 PGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFAT-------------------PPVHGSLANQVVHPADLCFKLPDNVS  157 (364)
Q Consensus        97 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~g~~~~~v~~~~~~~~~lP~~~~  157 (364)
                      +||+|++.+...|..|.+|..++.++|++......                   ....|+|+||+.+++++++++|++++
T Consensus        79 ~GdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~~ae~~~v~~~~~~~lP~~l~  158 (365)
T cd08277          79 PGDKVIPLFIGQCGECSNCRSGKTNLCQKYRANESGLMPDGTSRFTCKGKKIYHFLGTSTFSQYTVVDENYVAKIDPAAP  158 (365)
T ss_pred             CCCEEEECCCCCCCCCchhcCcCcccCcCccccccccccCCccccccCCcccccccccccceeeEEEchhheEECCCCCC
Confidence            99999998889999999999999999987543210                   01258999999999999999999999


Q ss_pred             ccchhhhh-hhHHHHHHH-HHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCC
Q 017916          158 LEEGAMCE-PLSVGLHAC-RRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVST  235 (364)
Q Consensus       158 ~~~aa~~~-~~~~a~~~l-~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~  235 (364)
                      +++++.+. .+.+||+++ +.+++++|++|||+|+|++|++++|+|+++|+++|++++++++|.++++++|++++++..+
T Consensus       159 ~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlV~G~g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~~~~~ga~~~i~~~~  238 (365)
T cd08277         159 LEHVCLLGCGFSTGYGAAWNTAKVEPGSTVAVFGLGAVGLSAIMGAKIAGASRIIGVDINEDKFEKAKEFGATDFINPKD  238 (365)
T ss_pred             HHHhhHhcchhHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCCcEecccc
Confidence            99988776 788999987 5688999999999988999999999999999977888889999999999999988877544


Q ss_pred             CcccHHHHHHHHHHHcCCCccEEEECCCCHHHHHHHHHhcccC-CEEEEEcCCCC-CccccchhhhhcCcEEEeeccC--
Q 017916          236 NLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAG-GKVCLVGMGHH-EMTVPLTPAAVREVDVVGVFRY--  311 (364)
Q Consensus       236 ~~~~~~~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~--  311 (364)
                      ...++.+.+++..   +.++|++|||+|+...+..++++++++ |+++.+|.... ...++...+.. ++++.+.+..  
T Consensus       239 ~~~~~~~~~~~~~---~~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~-~~~i~g~~~~~~  314 (365)
T cd08277         239 SDKPVSEVIREMT---GGGVDYSFECTGNADLMNEALESTKLGWGVSVVVGVPPGAELSIRPFQLIL-GRTWKGSFFGGF  314 (365)
T ss_pred             ccchHHHHHHHHh---CCCCCEEEECCCChHHHHHHHHhcccCCCEEEEEcCCCccccccCHhHHhh-CCEEEeeecCCC
Confidence            3334555665553   357999999999878889999999885 99999986432 22333334443 7788776543  


Q ss_pred             --CCcHHHHHHHHHcCCCCCCCceEEEeeCChhhHHHHHHHHhcCCCceEEEEe
Q 017916          312 --KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFN  363 (364)
Q Consensus       312 --~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~  363 (364)
                        ...+.+++++++++.+++.+.++++|+|  +++++|++.++++. ..|++++
T Consensus       315 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l--~~~~~A~~~~~~~~-~~k~~i~  365 (365)
T cd08277         315 KSRSDVPKLVSKYMNKKFDLDELITHVLPF--EEINKGFDLMKSGE-CIRTVIT  365 (365)
T ss_pred             ChHHHHHHHHHHHHCCCcChhHheeeEEch--hhHHHHHHHHHCCC-CceEeeC
Confidence              3468899999999998778889999999  99999999998886 5688874

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ i

>cd08230 glucose_DH Glucose dehydrogenase

Probab=100.00  E-value=4.9e-46  Score=345.93  Aligned_cols=331  Identities=27%  Similarity=0.393  Sum_probs=264.6

Q ss_pred             ceeEEEecC-CceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCCCCCCCC
Q 017916           18 NMAAWLLGV-NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLV   96 (364)
Q Consensus        18 ~~~~~~~~~-~~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~   96 (364)
                      |+++++..+ ..+++.++|.|+++++||+|||+++++|++|++.+.|.+.......+|.++|||++|+|+++|++ +.|+
T Consensus         1 mka~~~~~~~~~l~~~~~p~p~~~~~evlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~i~G~e~~G~V~~vG~~-~~~~   79 (355)
T cd08230           1 MKAIAVKPGKPGVRVVDIPEPEPTPGEVLVRTLEVGVCGTDREIVAGEYGTAPPGEDFLVLGHEALGVVEEVGDG-SGLS   79 (355)
T ss_pred             CceeEecCCCCCCeEEeCCCCCCCCCeEEEEEEEEEeccccHHHHcCCCCCCCCCCCCeeeccccceEEEEecCC-CCCC
Confidence            456666633 23999999999999999999999999999999999886422111246889999999999999999 9999


Q ss_pred             CCCEEEEcCCcCCCCCccccCCCCCCCCCcccc--ccCCCCCcceeEEEecCCceEECCCCCCccchhhhhhhHHHHHHH
Q 017916           97 PGDRVALEPGISCWRCDHCKGGRYNLCPEMKFF--ATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHAC  174 (364)
Q Consensus        97 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~g~~~~~v~~~~~~~~~lP~~~~~~~aa~~~~~~~a~~~l  174 (364)
                      +||+|++.+...|..|.+|..++.++|.+..++  +....+|+|+||+.++++.++++|++++ +.+++..+++++++++
T Consensus        80 vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~~~g~~~~~G~~aey~~~~~~~~~~~P~~~~-~~a~~~~p~~~~~~a~  158 (355)
T cd08230          80 PGDLVVPTVRRPPGKCLNCRIGRPDFCETGEYTERGIKGLHGFMREYFVDDPEYLVKVPPSLA-DVGVLLEPLSVVEKAI  158 (355)
T ss_pred             CCCEEEeccccCCCcChhhhCcCcccCCCcceeccCcCCCCccceeEEEeccccEEECCCCCC-cceeecchHHHHHHHH
Confidence            999999998889999999999999999876543  2223579999999999999999999999 5555555666655544


Q ss_pred             HH-------cCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEec---ChhHHHHHHHcCCCeEEecCCCcccHHHHH
Q 017916          175 RR-------ANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDV---DDYRLSVAKELGADNIVKVSTNLQDIAEEV  244 (364)
Q Consensus       175 ~~-------~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~---~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i  244 (364)
                      ..       ..+++|++|||+|+|++|++++|+|+++|+ .++++++   +++|.++++++|++. +++..  +++.+ .
T Consensus       159 ~~~~~~~~~~~~~~g~~vlI~G~G~vG~~a~q~ak~~G~-~vi~~~~~~~~~~~~~~~~~~Ga~~-v~~~~--~~~~~-~  233 (355)
T cd08230         159 EQAEAVQKRLPTWNPRRALVLGAGPIGLLAALLLRLRGF-EVYVLNRRDPPDPKADIVEELGATY-VNSSK--TPVAE-V  233 (355)
T ss_pred             HHHhhhhhhcccCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEEecCCCCHHHHHHHHHcCCEE-ecCCc--cchhh-h
Confidence            22       236789999999999999999999999999 5777766   678999999999986 44432  33332 1


Q ss_pred             HHHHHHcCCCccEEEECCCCHHHHHHHHHhcccCCEEEEEcCCCC--Ccccc----chhhhhcCcEEEeeccC-CCcHHH
Q 017916          245 EKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHH--EMTVP----LTPAAVREVDVVGVFRY-KNTWPL  317 (364)
Q Consensus       245 ~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~--~~~~~----~~~~~~~~~~~~~~~~~-~~~~~~  317 (364)
                      +     ...++|++|||+|++..+..++++|+++|+++.+|....  ...++    ...++.+++++.|+... ..++++
T Consensus       234 ~-----~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~k~~~i~g~~~~~~~~~~~  308 (355)
T cd08230         234 K-----LVGEFDLIIEATGVPPLAFEALPALAPNGVVILFGVPGGGREFEVDGGELNRDLVLGNKALVGSVNANKRHFEQ  308 (355)
T ss_pred             h-----hcCCCCEEEECcCCHHHHHHHHHHccCCcEEEEEecCCCCCccccChhhhhhhHhhcCcEEEEecCCchhhHHH
Confidence            1     135799999999987788999999999999999996543  22333    34567799999998654 567899


Q ss_pred             HHHHHHcCCC----CCCCceEEEeeCChhhHHHHHHHHhcCCCceEEEEeC
Q 017916          318 CLELLRSGKI----DVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  364 (364)
Q Consensus       318 ~~~~l~~g~~----~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  364 (364)
                      +++++.++.+    .+.+.++++|++  +++.+||+.++++.  +|+++++
T Consensus       309 ~~~~l~~~~~~~~~~~~~~i~~~~~l--~~~~~a~~~~~~~~--~K~v~~~  355 (355)
T cd08230         309 AVEDLAQWKYRWPGVLERLITRRVPL--EEFAEALTEKPDGE--IKVVIEW  355 (355)
T ss_pred             HHHHHHhcccccccchHHheeeeecH--HHHHHHHHhcccCC--eEEEeeC
Confidence            9999998872    246678899999  99999999887653  6999875

Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai

>PLN02178 cinnamyl-alcohol dehydrogenase

Probab=100.00  E-value=6.8e-46  Score=345.80  Aligned_cols=322  Identities=21%  Similarity=0.354  Sum_probs=266.1

Q ss_pred             cCCceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCCCCCCCCCCCEEEEc
Q 017916           25 GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALE  104 (364)
Q Consensus        25 ~~~~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~  104 (364)
                      +++.+++.+.+.|+++++||+|||.++++|++|++.+.|.+.   ...+|.++|||++|+|+++|+++++|++||+|+..
T Consensus        15 ~~~~l~~~~~~~p~~~~~eVlVkV~a~gic~sD~~~~~G~~~---~~~~p~i~GhE~aG~Vv~vG~~v~~~~vGdrV~~~   91 (375)
T PLN02178         15 ESGVLSPFHFSRRENGENDVTVKILFCGVCHSDLHTIKNHWG---FSRYPIIPGHEIVGIATKVGKNVTKFKEGDRVGVG   91 (375)
T ss_pred             CCCCceEEeecCCCCCCCeEEEEEEEEcCchHHHHHhcCCCC---CCCCCcccCceeeEEEEEECCCCCccCCCCEEEEc
Confidence            347888889999999999999999999999999998877532   12468999999999999999999999999999865


Q ss_pred             CCc-CCCCCccccCCCCCCCCCccccc------cCCCCCcceeEEEecCCceEECCCCCCccchhhhh-hhHHHHHHHHH
Q 017916          105 PGI-SCWRCDHCKGGRYNLCPEMKFFA------TPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHACRR  176 (364)
Q Consensus       105 ~~~-~~~~~~~~~~~~~~~~~~~~~~~------~~~~~g~~~~~v~~~~~~~~~lP~~~~~~~aa~~~-~~~~a~~~l~~  176 (364)
                      +.. .|..|.+|+.+++++|++..+..      ....+|+|+||+.+++++++++|+++++++|+.+. ...++|+++..
T Consensus        92 ~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~lP~~ls~~~aa~l~~~~~ta~~al~~  171 (375)
T PLN02178         92 VIIGSCQSCESCNQDLENYCPKVVFTYNSRSSDGTRNQGGYSDVIVVDHRFVLSIPDGLPSDSGAPLLCAGITVYSPMKY  171 (375)
T ss_pred             CccCCCCCChhHhCcchhcCCCccccccccccCCCcCCCccccEEEEchHHeEECCCCCCHHHcchhhccchHHHHHHHH
Confidence            544 69999999999999999865321      11236999999999999999999999999988665 67788988865


Q ss_pred             cC--CCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecCh-hHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcCC
Q 017916          177 AN--IGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDD-YRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGT  253 (364)
Q Consensus       177 ~~--~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~-~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~  253 (364)
                      ..  .++|++|+|.|+|++|++++|+|+++|++ +++++.++ ++.++++++|+++++++.+     .+.+++..   + 
T Consensus       172 ~~~~~~~g~~VlV~G~G~vG~~avq~Ak~~Ga~-Vi~~~~~~~~~~~~a~~lGa~~~i~~~~-----~~~v~~~~---~-  241 (375)
T PLN02178        172 YGMTKESGKRLGVNGLGGLGHIAVKIGKAFGLR-VTVISRSSEKEREAIDRLGADSFLVTTD-----SQKMKEAV---G-  241 (375)
T ss_pred             hCCCCCCCCEEEEEcccHHHHHHHHHHHHcCCe-EEEEeCChHHhHHHHHhCCCcEEEcCcC-----HHHHHHhh---C-
Confidence            43  46899999999999999999999999995 56665554 4578889999998876432     12344332   3 


Q ss_pred             CccEEEECCCCHHHHHHHHHhcccCCEEEEEcCCCCCccccchhhhhcCcEEEeeccC-CCcHHHHHHHHHcCCCCCCCc
Q 017916          254 GIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY-KNTWPLCLELLRSGKIDVKPL  332 (364)
Q Consensus       254 ~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~g~~~~~~~  332 (364)
                      ++|++|||+|....+..++++++++|+++.+|.......++...+..+++++.|.... .+.+.++++++++|++  ++.
T Consensus       242 ~~D~vid~~G~~~~~~~~~~~l~~~G~iv~vG~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g~i--~~~  319 (375)
T PLN02178        242 TMDFIIDTVSAEHALLPLFSLLKVSGKLVALGLPEKPLDLPIFPLVLGRKMVGGSQIGGMKETQEMLEFCAKHKI--VSD  319 (375)
T ss_pred             CCcEEEECCCcHHHHHHHHHhhcCCCEEEEEccCCCCCccCHHHHHhCCeEEEEeCccCHHHHHHHHHHHHhCCC--ccc
Confidence            6999999999777889999999999999999865444455666677899999998765 4678999999999998  444


Q ss_pred             eEEEeeCChhhHHHHHHHHhcCCCceEEEEeC
Q 017916          333 VTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  364 (364)
Q Consensus       333 ~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  364 (364)
                      + +.|+|  +++++|++.+++++..||+|+++
T Consensus       320 i-~~~~l--~~~~~A~~~~~~~~~~gkvvi~~  348 (375)
T PLN02178        320 I-ELIKM--SDINSAMDRLAKSDVRYRFVIDV  348 (375)
T ss_pred             E-EEEeH--HHHHHHHHHHHcCCCceEEEEEe
Confidence            5 67999  99999999999998899999874

>KOG0022 consensus Alcohol dehydrogenase, class III [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=3.1e-46  Score=318.61  Aligned_cols=341  Identities=26%  Similarity=0.421  Sum_probs=288.6

Q ss_pred             chhcceeEEEecC-CceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCCCC
Q 017916           14 GEEVNMAAWLLGV-NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEV   92 (364)
Q Consensus        14 ~~~~~~~~~~~~~-~~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v   92 (364)
                      ...+.+|++...+ ++|.++++..++|+.+||+||+.++++|++|...+.|..   ....+|.++|||.+|+|+.+|.+|
T Consensus         4 kvI~CKAAV~w~a~~PL~IEei~V~pPka~EVRIKI~~t~vCHTD~~~~~g~~---~~~~fP~IlGHEaaGIVESvGegV   80 (375)
T KOG0022|consen    4 KVITCKAAVAWEAGKPLVIEEIEVAPPKAHEVRIKILATGVCHTDAYVWSGKD---PEGLFPVILGHEAAGIVESVGEGV   80 (375)
T ss_pred             CceEEeEeeeccCCCCeeEEEEEeCCCCCceEEEEEEEEeeccccceeecCCC---ccccCceEecccceeEEEEecCCc
Confidence            3456788887755 899999999999999999999999999999999888754   235789999999999999999999


Q ss_pred             CCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCcccc--------ccC-----------CCCC--cceeEEEecCCceEE
Q 017916           93 KTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFF--------ATP-----------PVHG--SLANQVVHPADLCFK  151 (364)
Q Consensus        93 ~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~-----------~~~g--~~~~~v~~~~~~~~~  151 (364)
                      +.+++||+|++.....|+.|.+|..+.-|+|..--..        +..           ..-|  +|+||.+++...+.+
T Consensus        81 ~~vk~GD~Viplf~p~CgeCk~C~s~ktNlC~~~~~~~~~~~~~~DgtSRF~~~gk~iyHfmg~StFsEYTVv~~~~v~k  160 (375)
T KOG0022|consen   81 TTVKPGDHVIPLFTPQCGECKFCKSPKTNLCEKFRADNGKGGMPYDGTSRFTCKGKPIYHFMGTSTFSEYTVVDDISVAK  160 (375)
T ss_pred             cccCCCCEEeeccccCCCCcccccCCCCChhhhhcccccccccccCCceeeeeCCCceEEecccccceeEEEeecceeEe
Confidence            9999999999999999999999999999999432111        110           0113  899999999999999


Q ss_pred             CCCCCCccchhhhh-hhHHHHHHH-HHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCe
Q 017916          152 LPDNVSLEEGAMCE-PLSVGLHAC-RRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADN  229 (364)
Q Consensus       152 lP~~~~~~~aa~~~-~~~~a~~~l-~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~  229 (364)
                      +++..+.+.++++. .+.|+|-+. +.+++++|+++.|.|-|++|+++++-||+.|+++++++|.+++|++.+++||++.
T Consensus       161 Id~~aPl~kvcLLgCGvsTG~GAa~~~Akv~~GstvAVfGLG~VGLav~~Gaka~GAsrIIgvDiN~~Kf~~ak~fGaTe  240 (375)
T KOG0022|consen  161 IDPSAPLEKVCLLGCGVSTGYGAAWNTAKVEPGSTVAVFGLGGVGLAVAMGAKAAGASRIIGVDINPDKFEKAKEFGATE  240 (375)
T ss_pred             cCCCCChhheeEeeccccccchhhhhhcccCCCCEEEEEecchHHHHHHHhHHhcCcccEEEEecCHHHHHHHHhcCcce
Confidence            99999999999886 788888775 7899999999999999999999999999999999999999999999999999999


Q ss_pred             EEecCCCcccHHHHHHHHHHHcCCCccEEEECCCCHHHHHHHHHhcccC-CEEEEEcCCCCCccccchhh-hhcCcEEEe
Q 017916          230 IVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAG-GKVCLVGMGHHEMTVPLTPA-AVREVDVVG  307 (364)
Q Consensus       230 ~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~-~~~~~~~~~  307 (364)
                      ++|-.+......+.+++++   +.++|+.|||+|+.+.+++++.+...+ |+-+.+|.......+...++ ..++.++.|
T Consensus       241 ~iNp~d~~~~i~evi~EmT---dgGvDysfEc~G~~~~m~~al~s~h~GwG~sv~iGv~~~~~~i~~~p~~l~~GR~~~G  317 (375)
T KOG0022|consen  241 FINPKDLKKPIQEVIIEMT---DGGVDYSFECIGNVSTMRAALESCHKGWGKSVVIGVAAAGQEISTRPFQLVTGRTWKG  317 (375)
T ss_pred             ecChhhccccHHHHHHHHh---cCCceEEEEecCCHHHHHHHHHHhhcCCCeEEEEEecCCCcccccchhhhccccEEEE
Confidence            8874322234555666664   589999999999999999999999998 99999997655444444442 234555555


Q ss_pred             ec----cCCCcHHHHHHHHHcCCCCCCCceEEEeeCChhhHHHHHHHHhcCCCceEEEEe
Q 017916          308 VF----RYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFN  363 (364)
Q Consensus       308 ~~----~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~  363 (364)
                      ..    ..+..+..+++.+.++++++...+++.++|  +++++||+.|.+++.. |.|+.
T Consensus       318 s~FGG~K~~~~iP~lV~~y~~~~l~ld~~ITh~l~f--~~In~AF~ll~~Gksi-R~vl~  374 (375)
T KOG0022|consen  318 SAFGGFKSKSDIPKLVKDYMKKKLNLDEFITHELPF--EEINKAFDLLHEGKSI-RCVLW  374 (375)
T ss_pred             EecccccchhhhhHHHHHHHhCccchhhhhhcccCH--HHHHHHHHHHhCCceE-EEEEe
Confidence            43    337889999999999999999999999999  9999999999999766 66665

>KOG1197 consensus Predicted quinone oxidoreductase [Energy production and conversion; General function prediction only]

Probab=100.00  E-value=1.1e-46  Score=311.93  Aligned_cols=305  Identities=27%  Similarity=0.364  Sum_probs=263.0

Q ss_pred             ceeEEEe---cCCceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCCCCCC
Q 017916           18 NMAAWLL---GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT   94 (364)
Q Consensus        18 ~~~~~~~---~~~~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~   94 (364)
                      .+.++++   +.+.+++.+.|.|++.|+|++||-+|+|+|+.|.-.++|.|.   ...+|++||.|.+|+|+++|++|++
T Consensus         9 ~k~i~v~e~Ggydvlk~ed~pv~~papgel~iknka~GlNfid~y~RkGlY~---~~plPytpGmEaaGvVvAvG~gvtd   85 (336)
T KOG1197|consen    9 LKCIVVTEFGGYDVLKLEDRPVPPPAPGELTIKNKACGLNFIDLYFRKGLYD---PAPLPYTPGMEAAGVVVAVGEGVTD   85 (336)
T ss_pred             heEEEEeccCCcceEEEeeecCCCCCCCceEEeehhcCccHHHHHHhccccC---CCCCCcCCCcccceEEEEecCCccc
Confidence            3444444   568999999999999999999999999999999998998774   3688999999999999999999999


Q ss_pred             CCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCccchhhh-hhhHHHHHH
Q 017916           95 LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMC-EPLSVGLHA  173 (364)
Q Consensus        95 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~lP~~~~~~~aa~~-~~~~~a~~~  173 (364)
                      +++||||+.+                            +..|.|+|+..+|...++++|+.+++.+||++ ....|||..
T Consensus        86 rkvGDrVayl----------------------------~~~g~yaee~~vP~~kv~~vpe~i~~k~aaa~llq~lTAy~l  137 (336)
T KOG1197|consen   86 RKVGDRVAYL----------------------------NPFGAYAEEVTVPSVKVFKVPEAITLKEAAALLLQGLTAYML  137 (336)
T ss_pred             cccccEEEEe----------------------------ccchhhheeccccceeeccCCcccCHHHHHHHHHHHHHHHHH
Confidence            9999999865                            36799999999999999999999999998855 489999999


Q ss_pred             HH-HcCCCCCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHc
Q 017916          174 CR-RANIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAM  251 (364)
Q Consensus       174 l~-~~~~~~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~  251 (364)
                      ++ ..++++|++||+|.| |++|++++|++++.|+ +++++.++.+|.+.+++-|+.+.|+|+.  +|+.+++++++.  
T Consensus       138 l~e~y~vkpGhtVlvhaAAGGVGlll~Ql~ra~~a-~tI~~asTaeK~~~akenG~~h~I~y~~--eD~v~~V~kiTn--  212 (336)
T KOG1197|consen  138 LFEAYNVKPGHTVLVHAAAGGVGLLLCQLLRAVGA-HTIATASTAEKHEIAKENGAEHPIDYST--EDYVDEVKKITN--  212 (336)
T ss_pred             HHHhcCCCCCCEEEEEeccccHHHHHHHHHHhcCc-EEEEEeccHHHHHHHHhcCCcceeeccc--hhHHHHHHhccC--
Confidence            85 589999999999976 9999999999999999 6788889999999999999999999754  788888888863  


Q ss_pred             CCCccEEEECCCCHHHHHHHHHhcccCCEEEEEcCCCCC-ccccchhhhhcCcEEEeeccC-----CC----cHHHHHHH
Q 017916          252 GTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHE-MTVPLTPAAVREVDVVGVFRY-----KN----TWPLCLEL  321 (364)
Q Consensus       252 ~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~-----~~----~~~~~~~~  321 (364)
                      ++|+|+++|.+| .+++...+.+|++.|+++.+|+..+. -++++..+..+.+++.-....     +.    ...+++.+
T Consensus       213 gKGVd~vyDsvG-~dt~~~sl~~Lk~~G~mVSfG~asgl~~p~~l~~ls~k~l~lvrpsl~gYi~g~~el~~~v~rl~al  291 (336)
T KOG1197|consen  213 GKGVDAVYDSVG-KDTFAKSLAALKPMGKMVSFGNASGLIDPIPLNQLSPKALQLVRPSLLGYIDGEVELVSYVARLFAL  291 (336)
T ss_pred             CCCceeeecccc-chhhHHHHHHhccCceEEEeccccCCCCCeehhhcChhhhhhccHhhhcccCCHHHHHHHHHHHHHH
Confidence            889999999999 78999999999999999999975443 345555566666554433221     22    34577788


Q ss_pred             HHcCCCCCCCceEEEeeCChhhHHHHHHHHhcCCCceEEEEe
Q 017916          322 LRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFN  363 (364)
Q Consensus       322 l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~  363 (364)
                      +.+|.+  ++.+.++|+|  +++.+|+.++++..+.||+++.
T Consensus       292 vnsg~l--k~~I~~~ypl--s~vadA~~diesrktvGkvlLl  329 (336)
T KOG1197|consen  292 VNSGHL--KIHIDHVYPL--SKVADAHADIESRKTVGKVLLL  329 (336)
T ss_pred             hhcCcc--ceeeeeecch--HHHHHHHHHHHhhhccceEEEe
Confidence            888988  7889999999  9999999999999999999975

>TIGR02822 adh_fam_2 zinc-binding alcohol dehydrogenase family protein

Probab=100.00  E-value=2.3e-45  Score=337.23  Aligned_cols=312  Identities=23%  Similarity=0.309  Sum_probs=267.1

Q ss_pred             CceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCCCCCCCCCCCEEEEcCC
Q 017916           27 NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPG  106 (364)
Q Consensus        27 ~~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~  106 (364)
                      ..+++.+.|.|+++++||+|||+++++|++|+..+.|.+..   ...|.++|||++|+|+++|++++.|++||+|+..+.
T Consensus        13 ~~l~~~~~p~P~~~~~evlVkv~~~gi~~~D~~~~~g~~~~---~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~   89 (329)
T TIGR02822        13 GPLRFVERPVPRPGPGELLVRVRACGVCRTDLHVSEGDLPV---HRPRVTPGHEVVGEVAGRGADAGGFAVGDRVGIAWL   89 (329)
T ss_pred             CCceEEeCCCCCCCCCeEEEEEEEEeecchhHHHHcCCCCC---CCCCccCCcceEEEEEEECCCCcccCCCCEEEEcCc
Confidence            46899999999999999999999999999999988875421   234789999999999999999999999999987654


Q ss_pred             -cCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCccchhhhh-hhHHHHHHHHHcCCCCCCE
Q 017916          107 -ISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHACRRANIGPETN  184 (364)
Q Consensus       107 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~lP~~~~~~~aa~~~-~~~~a~~~l~~~~~~~g~~  184 (364)
                       ..|..|.+|..++.++|.+..+++. ..+|+|+||+.+++++++++|+++++++++.+. .+.+||++++.+++++|++
T Consensus        90 ~~~c~~c~~c~~g~~~~c~~~~~~g~-~~~G~~aey~~v~~~~~~~lP~~~~~~~aa~l~~~~~ta~~~~~~~~~~~g~~  168 (329)
T TIGR02822        90 RRTCGVCRYCRRGAENLCPASRYTGW-DTDGGYAEYTTVPAAFAYRLPTGYDDVELAPLLCAGIIGYRALLRASLPPGGR  168 (329)
T ss_pred             cCcCCCChHHhCcCcccCCCcccCCc-ccCCcceeEEEeccccEEECCCCCCHHHhHHHhccchHHHHHHHhcCCCCCCE
Confidence             4699999999999999998776553 457999999999999999999999998888554 7889999998888999999


Q ss_pred             EEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcCCCccEEEECCCC
Q 017916          185 VLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGF  264 (364)
Q Consensus       185 VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid~~g~  264 (364)
                      |||+|+|++|++++|+|+.+|+ .+++++.+++|.++++++|+++++++....              ..++|+++++.+.
T Consensus       169 VlV~G~g~iG~~a~~~a~~~G~-~vi~~~~~~~~~~~a~~~Ga~~vi~~~~~~--------------~~~~d~~i~~~~~  233 (329)
T TIGR02822       169 LGLYGFGGSAHLTAQVALAQGA-TVHVMTRGAAARRLALALGAASAGGAYDTP--------------PEPLDAAILFAPA  233 (329)
T ss_pred             EEEEcCCHHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHhCCceeccccccC--------------cccceEEEECCCc
Confidence            9999999999999999999999 578888899999999999999887632110              2368999998888


Q ss_pred             HHHHHHHHHhcccCCEEEEEcCCCC-CccccchhhhhcCcEEEeeccC-CCcHHHHHHHHHcCCCCCCCceEEEeeCChh
Q 017916          265 NKTMSTALSATRAGGKVCLVGMGHH-EMTVPLTPAAVREVDVVGVFRY-KNTWPLCLELLRSGKIDVKPLVTHRFGFSQK  342 (364)
Q Consensus       265 ~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~  342 (364)
                      ++.+...+++|+++|+++.+|.... ...++...+..+++++.+.... +..+.++++++++|++  + .++++|+|  +
T Consensus       234 ~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g~i--~-~i~~~~~l--~  308 (329)
T TIGR02822       234 GGLVPPALEALDRGGVLAVAGIHLTDTPPLNYQRHLFYERQIRSVTSNTRADAREFLELAAQHGV--R-VTTHTYPL--S  308 (329)
T ss_pred             HHHHHHHHHhhCCCcEEEEEeccCccCCCCCHHHHhhCCcEEEEeecCCHHHHHHHHHHHHhCCC--e-eEEEEEeH--H
Confidence            8899999999999999999996432 2234445566788898887654 4568889999999998  3 35788999  9


Q ss_pred             hHHHHHHHHhcCCCceEEEE
Q 017916          343 EVEEAFETSARGGTAIKVMF  362 (364)
Q Consensus       343 ~~~~a~~~~~~~~~~gkvvv  362 (364)
                      ++++|++.++++...||+|+
T Consensus       309 ~~~~A~~~~~~~~~~Gkvvl  328 (329)
T TIGR02822       309 EADRALRDLKAGRFDGAAVL  328 (329)
T ss_pred             HHHHHHHHHHcCCCceEEEe
Confidence            99999999999999999987

Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). The gene neighborhood of members of this family is not conserved and it appears that no members are characterized. The sequence of the family includes 6 invariant cysteine residues and one invariant histidine. It appears that no member is characterized.

>cd08237 ribitol-5-phosphate_DH ribitol-5-phosphate dehydrogenase

Probab=100.00  E-value=3.1e-45  Score=338.25  Aligned_cols=324  Identities=23%  Similarity=0.330  Sum_probs=259.4

Q ss_pred             ceeEEEecCCceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCc-cCCCCcccccceeEEEEEeCCCCCCCC
Q 017916           18 NMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADF-VVKEPMVIGHECAGVIEKVGSEVKTLV   96 (364)
Q Consensus        18 ~~~~~~~~~~~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~-~~~~p~~~G~e~~G~V~~vG~~v~~~~   96 (364)
                      .+++++.+|+.+++.+.|.|. +++||+|||+++|||++|++.+.|.+.... ...+|.++|||++|+|+++|.+  .|+
T Consensus         3 ~~~~~~~~~~~~~~~~~~~P~-~~~eVlVkv~a~gIc~sD~~~~~G~~~~~~~~~~~P~i~GhE~~G~V~~~g~~--~~~   79 (341)
T cd08237           3 NQVYRLVRPKFFEVTYEEENL-REDWVIVRPTYLSICHADQRYYQGNRSPEALKKKLPMALIHEGIGVVVSDPTG--TYK   79 (341)
T ss_pred             ccceEEeccceEEEeecCCCC-CCCeEEEEEEEEEEcCccHHHHcCCCCcccccCCCCeeccceeEEEEEeeCCC--ccC
Confidence            567888999999999999995 999999999999999999999987643211 1357999999999999998764  799


Q ss_pred             CCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCccchhhhhhhHHHHHHHHH
Q 017916           97 PGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRR  176 (364)
Q Consensus        97 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~lP~~~~~~~aa~~~~~~~a~~~l~~  176 (364)
                      +||+|+..+...|. |+.|  ...++|.+..+.+. ..+|+|+||+++++++++++|+++++++|+++.+++++++++..
T Consensus        80 vGdrV~~~~~~~~~-~~~~--~~~~~c~~~~~~g~-~~~G~~aey~~v~~~~~~~vP~~l~~~~aa~~~~~~~a~~a~~~  155 (341)
T cd08237          80 VGTKVVMVPNTPVE-KDEI--IPENYLPSSRFRSS-GYDGFMQDYVFLPPDRLVKLPDNVDPEVAAFTELVSVGVHAISR  155 (341)
T ss_pred             CCCEEEECCCCCch-hccc--chhccCCCcceeEe-cCCCceEEEEEEchHHeEECCCCCChHHhhhhchHHHHHHHHHH
Confidence            99999998776676 4455  45678887765542 35799999999999999999999999998888899999999853


Q ss_pred             ---cCCCCCCEEEEEcCCHHHHHHHHHHHH-CCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcC
Q 017916          177 ---ANIGPETNVLIMGAGPIGLVTMLGARA-FGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMG  252 (364)
Q Consensus       177 ---~~~~~g~~VLI~Gag~~G~~ai~la~~-~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~  252 (364)
                         +.+++|++|||.|+|++|++++|+|+. +|+..|++++.+++|.+++++++.+..++      +       +.+  .
T Consensus       156 ~~~~~~~~g~~VlV~G~G~vGl~~~~~a~~~~g~~~vi~~~~~~~k~~~a~~~~~~~~~~------~-------~~~--~  220 (341)
T cd08237         156 FEQIAHKDRNVIGVWGDGNLGYITALLLKQIYPESKLVVFGKHQEKLDLFSFADETYLID------D-------IPE--D  220 (341)
T ss_pred             HhhcCCCCCCEEEEECCCHHHHHHHHHHHHhcCCCcEEEEeCcHhHHHHHhhcCceeehh------h-------hhh--c
Confidence               457899999999999999999999986 67657888888999999998766543211      1       111  2


Q ss_pred             CCccEEEECCC---CHHHHHHHHHhcccCCEEEEEcCCCCCccccchhhhhcCcEEEeeccC-CCcHHHHHHHHHcC---
Q 017916          253 TGIDVSFDCAG---FNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY-KNTWPLCLELLRSG---  325 (364)
Q Consensus       253 ~~~d~vid~~g---~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~g---  325 (364)
                      .++|++||++|   .+..+..++++|+++|+++.+|....+..++...++.+++++.+.... .+.+++++++++++   
T Consensus       221 ~g~d~viD~~G~~~~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~k~~~i~g~~~~~~~~~~~~~~~~~~~~~~  300 (341)
T cd08237         221 LAVDHAFECVGGRGSQSAINQIIDYIRPQGTIGLMGVSEYPVPINTRMVLEKGLTLVGSSRSTREDFERAVELLSRNPEV  300 (341)
T ss_pred             cCCcEEEECCCCCccHHHHHHHHHhCcCCcEEEEEeecCCCcccCHHHHhhCceEEEEecccCHHHHHHHHHHHHhCCcc
Confidence            36999999999   456889999999999999999975444455556678899999998765 46789999999999   


Q ss_pred             CCCCCCceEEEeeCC-hhhHHHHHHHHhcCCCceEEEEeC
Q 017916          326 KIDVKPLVTHRFGFS-QKEVEEAFETSARGGTAIKVMFNL  364 (364)
Q Consensus       326 ~~~~~~~~~~~~~~~-~~~~~~a~~~~~~~~~~gkvvv~~  364 (364)
                      ..++.+.+++.|+++ .+++.+|++.+.++ ..||+|+++
T Consensus       301 ~~~l~~~i~~~~~l~~l~~~~~a~~~~~~~-~~gKvvi~~  339 (341)
T cd08237         301 AEYLRKLVGGVFPVRSINDIHRAFESDLTN-SWGKTVMEW  339 (341)
T ss_pred             cCChHHHhccccccccHHHHHHHHHHHhhc-CcceEEEEe
Confidence            334578888999872 24566666666554 789999874

NAD-linked ribitol-5-phosphate dehydrogenase, a member of the MDR/zinc-dependent alcohol dehydrogenase-like family, oxidizes the phosphate ester of ribitol-5-phosphate to xylulose-5-phosphate of the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (

>PLN02514 cinnamyl-alcohol dehydrogenase

Probab=100.00  E-value=6.8e-44  Score=331.31  Aligned_cols=329  Identities=21%  Similarity=0.309  Sum_probs=269.2

Q ss_pred             ceeEEEecC-CceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCCCCCCCC
Q 017916           18 NMAAWLLGV-NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLV   96 (364)
Q Consensus        18 ~~~~~~~~~-~~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~   96 (364)
                      +++++...+ ..+++.+++.|+++++||+|||.++++|+.|+..+.|.+..   ..+|.++|||++|+|+++|+++++|+
T Consensus        10 ~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVrv~a~gi~~~D~~~~~g~~~~---~~~p~i~G~E~~G~Vv~vG~~v~~~~   86 (357)
T PLN02514         10 TTGWAARDPSGHLSPYTYTLRKTGPEDVVIKVIYCGICHTDLHQIKNDLGM---SNYPMVPGHEVVGEVVEVGSDVSKFT   86 (357)
T ss_pred             EEEEEEecCCCCceEEeecCCCCCCCcEEEEEEEeccChHHHHhhcCCcCc---CCCCccCCceeeEEEEEECCCccccc
Confidence            567777765 67999999999999999999999999999999988764321   24689999999999999999999999


Q ss_pred             CCCEEEEcCC-cCCCCCccccCCCCCCCCCccccc------cCCCCCcceeEEEecCCceEECCCCCCccchhhhh-hhH
Q 017916           97 PGDRVALEPG-ISCWRCDHCKGGRYNLCPEMKFFA------TPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLS  168 (364)
Q Consensus        97 ~Gd~V~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~g~~~~~v~~~~~~~~~lP~~~~~~~aa~~~-~~~  168 (364)
                      +||+|+..+. ..|..|.+|..++.++|.+..+..      ....+|+|+||+.++.+.++++|+++++++|+.++ .+.
T Consensus        87 ~Gd~V~~~~~~~~c~~C~~c~~g~~~~c~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~  166 (357)
T PLN02514         87 VGDIVGVGVIVGCCGECSPCKSDLEQYCNKRIWSYNDVYTDGKPTQGGFASAMVVDQKFVVKIPEGMAPEQAAPLLCAGV  166 (357)
T ss_pred             CCCEEEEcCccccCCCChhHhCCCcccCCCccccccccccCCccCCCccccEEEEchHHeEECCCCCCHHHhhhhhhhHH
Confidence            9999986543 469999999999999998864321      11246999999999999999999999999988665 778


Q ss_pred             HHHHHHHH-cCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHH-HHHHHcCCCeEEecCCCcccHHHHHHH
Q 017916          169 VGLHACRR-ANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRL-SVAKELGADNIVKVSTNLQDIAEEVEK  246 (364)
Q Consensus       169 ~a~~~l~~-~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~-~~~~~lg~~~~~~~~~~~~~~~~~i~~  246 (364)
                      +||+++.. ...++|++|+|+|+|++|++++|+|+++|++ +++++.++++. ..++++|++.++++..     .+.+++
T Consensus       167 ta~~al~~~~~~~~g~~vlV~G~G~vG~~av~~Ak~~G~~-vi~~~~~~~~~~~~~~~~Ga~~~i~~~~-----~~~~~~  240 (357)
T PLN02514        167 TVYSPLSHFGLKQSGLRGGILGLGGVGHMGVKIAKAMGHH-VTVISSSDKKREEALEHLGADDYLVSSD-----AAEMQE  240 (357)
T ss_pred             HHHHHHHHcccCCCCCeEEEEcccHHHHHHHHHHHHCCCe-EEEEeCCHHHHHHHHHhcCCcEEecCCC-----hHHHHH
Confidence            99999865 4568999999998899999999999999995 55565666555 4556799987665322     123333


Q ss_pred             HHHHcCCCccEEEECCCCHHHHHHHHHhcccCCEEEEEcCCCCCccccchhhhhcCcEEEeeccC-CCcHHHHHHHHHcC
Q 017916          247 IQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY-KNTWPLCLELLRSG  325 (364)
Q Consensus       247 ~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~g  325 (364)
                      .    ..++|++|||+|....+..++++++++|+++.+|.......+....++.+++++.+.+.. ...++++++++++|
T Consensus       241 ~----~~~~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~g  316 (357)
T PLN02514        241 A----ADSLDYIIDTVPVFHPLEPYLSLLKLDGKLILMGVINTPLQFVTPMLMLGRKVITGSFIGSMKETEEMLEFCKEK  316 (357)
T ss_pred             h----cCCCcEEEECCCchHHHHHHHHHhccCCEEEEECCCCCCCcccHHHHhhCCcEEEEEecCCHHHHHHHHHHHHhC
Confidence            2    236999999999777889999999999999999965444455566677889999998765 45789999999999


Q ss_pred             CCCCCCceEEEeeCChhhHHHHHHHHhcCCCceEEEEeC
Q 017916          326 KIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  364 (364)
Q Consensus       326 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  364 (364)
                      ++  .+.+ ++|+|  +++.+||+.++++...||+++++
T Consensus       317 ~l--~~~i-~~~~l--~~~~~A~~~~~~~~~~gk~v~~~  350 (357)
T PLN02514        317 GL--TSMI-EVVKM--DYVNTAFERLEKNDVRYRFVVDV  350 (357)
T ss_pred             CC--cCcE-EEEcH--HHHHHHHHHHHcCCCceeEEEEc
Confidence            87  5555 57899  99999999999998889999864

>PRK10083 putative oxidoreductase; Provisional

Probab=100.00  E-value=1.5e-43  Score=327.57  Aligned_cols=335  Identities=28%  Similarity=0.477  Sum_probs=281.1

Q ss_pred             ceeEEEecCCceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCCCCCCCCC
Q 017916           18 NMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVP   97 (364)
Q Consensus        18 ~~~~~~~~~~~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~   97 (364)
                      |+++++.+++.+++.+.+.|+++++||+||+.++++|+.|+....|.+..   ..+|.++|+|++|+|+.+|++++.+++
T Consensus         1 m~a~~~~~~~~~~~~~~~~p~~~~~~vlV~v~~~gi~~~d~~~~~g~~~~---~~~p~i~G~e~~G~V~~vG~~v~~~~~   77 (339)
T PRK10083          1 MKSIVIEKPNSLAIEERPIPQPAAGEVRVKVKLAGICGSDSHIYRGHNPF---AKYPRVIGHEFFGVIDAVGEGVDAARI   77 (339)
T ss_pred             CeEEEEecCCeeEEEeccCCCCCCCeEEEEEEEEEEcccchHHHcCCCCc---CCCCcccccceEEEEEEECCCCccCCC
Confidence            46788888889999999999999999999999999999999988765421   246899999999999999999999999


Q ss_pred             CCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCccchhhhhhhHHHHHHHHHc
Q 017916           98 GDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRA  177 (364)
Q Consensus        98 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~lP~~~~~~~aa~~~~~~~a~~~l~~~  177 (364)
                      ||+|+..+..+|+.|.+|..+++++|.++.+.+. ..+|+|++|+.++.++++++|++++++.++.+.++.+++++++.+
T Consensus        78 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~ip~~~~~~~a~~~~~~~~a~~~~~~~  156 (339)
T PRK10083         78 GERVAVDPVISCGHCYPCSIGKPNVCTSLVVLGV-HRDGGFSEYAVVPAKNAHRIPDAIADQYAVMVEPFTIAANVTGRT  156 (339)
T ss_pred             CCEEEEccccCCCCCccccCcCcccCCCCceEEE-ccCCcceeeEEechHHeEECcCCCCHHHHhhhchHHHHHHHHHhc
Confidence            9999999888999999999999999998776543 347999999999999999999999988877666778888766788


Q ss_pred             CCCCCCEEEEEcCCHHHHHHHHHHHH-CCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcCCCcc
Q 017916          178 NIGPETNVLIMGAGPIGLVTMLGARA-FGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGID  256 (364)
Q Consensus       178 ~~~~g~~VLI~Gag~~G~~ai~la~~-~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d  256 (364)
                      ++++|++|||+|+|.+|++++|+|+. +|++.+++++++++|.++++++|++.++++..  .++.+.+..    .+.++|
T Consensus       157 ~~~~g~~vlI~g~g~vG~~~~~~a~~~~G~~~v~~~~~~~~~~~~~~~~Ga~~~i~~~~--~~~~~~~~~----~g~~~d  230 (339)
T PRK10083        157 GPTEQDVALIYGAGPVGLTIVQVLKGVYNVKAVIVADRIDERLALAKESGADWVINNAQ--EPLGEALEE----KGIKPT  230 (339)
T ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHhCCcEEecCcc--ccHHHHHhc----CCCCCC
Confidence            99999999999999999999999996 69988888988999999999999998877543  445544422    134567


Q ss_pred             EEEECCCCHHHHHHHHHhcccCCEEEEEcCCCCCccccchhhhhcCcEEEeeccCCCcHHHHHHHHHcCCCCCCCceEEE
Q 017916          257 VSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHR  336 (364)
Q Consensus       257 ~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~~~  336 (364)
                      ++||++|++..+...+++|+++|+++.+|............+..+.+++.+.....+.+++++++++++++++.+.+.+.
T Consensus       231 ~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~  310 (339)
T PRK10083        231 LIIDAACHPSILEEAVTLASPAARIVLMGFSSEPSEIVQQGITGKELSIFSSRLNANKFPVVIDWLSKGLIDPEKLITHT  310 (339)
T ss_pred             EEEECCCCHHHHHHHHHHhhcCCEEEEEccCCCCceecHHHHhhcceEEEEEecChhhHHHHHHHHHcCCCChHHheeee
Confidence            99999998778899999999999999998654322233334456778887776667789999999999998544357788


Q ss_pred             eeCChhhHHHHHHHHhcC-CCceEEEEeC
Q 017916          337 FGFSQKEVEEAFETSARG-GTAIKVMFNL  364 (364)
Q Consensus       337 ~~~~~~~~~~a~~~~~~~-~~~gkvvv~~  364 (364)
                      |++  +++++|++.++++ ...+|+++++
T Consensus       311 ~~l--~~~~~a~~~~~~~~~~~~kvvv~~  337 (339)
T PRK10083        311 FDF--QHVADAIELFEKDQRHCCKVLLTF  337 (339)
T ss_pred             ecH--HHHHHHHHHHhcCCCceEEEEEec
Confidence            999  9999999999865 4679999874

>cd08231 MDR_TM0436_like Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH)

Probab=100.00  E-value=2.7e-43  Score=328.48  Aligned_cols=338  Identities=32%  Similarity=0.525  Sum_probs=280.3

Q ss_pred             eeEEEecCC-ceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCCCCCC---
Q 017916           19 MAAWLLGVN-TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT---   94 (364)
Q Consensus        19 ~~~~~~~~~-~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~---   94 (364)
                      +++++.... .+++++.+.|.++++||+|||.++++|+.|+....|.+..   ..+|.++|+|++|+|+++|++++.   
T Consensus         2 ka~~~~~~~~~l~~~~~~~p~~~~~evlV~v~a~~l~~~d~~~~~g~~~~---~~~p~~~G~e~~G~V~~vG~~v~~~~~   78 (361)
T cd08231           2 RAAVLTGPGKPLEIREVPLPDLEPGAVLVRVRLAGVCGSDVHTVAGRRPR---VPLPIILGHEGVGRVVALGGGVTTDVA   78 (361)
T ss_pred             eEEEEcCCCCCCEEEeccCCCCCCCeEEEEEEEEeecCccHHHhcCCCCC---CCCCcccccCCceEEEEeCCCcccccc
Confidence            567777654 9999999999999999999999999999999988875421   356889999999999999999986   


Q ss_pred             ---CCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccC------CCCCcceeEEEecCC-ceEECCCCCCccchhhh
Q 017916           95 ---LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATP------PVHGSLANQVVHPAD-LCFKLPDNVSLEEGAMC  164 (364)
Q Consensus        95 ---~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~g~~~~~v~~~~~-~~~~lP~~~~~~~aa~~  164 (364)
                         |++||+|++.+..+|+.|..|..+++++|++..+++..      ...|+|++|+.++++ +++++|++++...|+++
T Consensus        79 ~~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~lP~~~~~~~aa~~  158 (361)
T cd08231          79 GEPLKVGDRVTWSVGAPCGRCYRCLVGDPTKCENRKKYGHEASCDDPHLSGGYAEHIYLPPGTAIVRVPDNVPDEVAAPA  158 (361)
T ss_pred             CCccCCCCEEEEcccCCCCCChhHhCcCccccccchhccccccccCCCCCcccceEEEecCCCceEECCCCCCHHHHHHh
Confidence               99999999999999999999999999999987665431      246999999999996 79999999998888877


Q ss_pred             -hhhHHHHHHHHH-cCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCc-ccHH
Q 017916          165 -EPLSVGLHACRR-ANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNL-QDIA  241 (364)
Q Consensus       165 -~~~~~a~~~l~~-~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~-~~~~  241 (364)
                       .++.|||+++.. ...++|++|||+|+|.+|++++|+|+.+|++.++++++++++.++++++|++.+++++... .++.
T Consensus       159 ~~~~~ta~~al~~~~~~~~g~~vlI~g~g~vG~~~~~lak~~G~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~  238 (361)
T cd08231         159 NCALATVLAALDRAGPVGAGDTVVVQGAGPLGLYAVAAAKLAGARRVIVIDGSPERLELAREFGADATIDIDELPDPQRR  238 (361)
T ss_pred             cCHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCCeEEcCcccccHHHH
Confidence             589999999966 4456999999998899999999999999996678888899999999999998887754321 1222


Q ss_pred             HHHHHHHHHcCCCccEEEECCCCHHHHHHHHHhcccCCEEEEEcCCCC--CccccchhhhhcCcEEEeeccC-CCcHHHH
Q 017916          242 EEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHH--EMTVPLTPAAVREVDVVGVFRY-KNTWPLC  318 (364)
Q Consensus       242 ~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~--~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~  318 (364)
                      ..++++.  .+.++|++|||+|+...+...+++++++|+++.+|....  ...+....+..+++++.+.... .+.++++
T Consensus       239 ~~i~~~~--~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  316 (361)
T cd08231         239 AIVRDIT--GGRGADVVIEASGHPAAVPEGLELLRRGGTYVLVGSVAPAGTVPLDPERIVRKNLTIIGVHNYDPSHLYRA  316 (361)
T ss_pred             HHHHHHh--CCCCCcEEEECCCChHHHHHHHHHhccCCEEEEEcCCCCCCccccCHHHHhhcccEEEEcccCCchhHHHH
Confidence            3454443  356899999999977788999999999999999985432  2233334467889999888765 5678999


Q ss_pred             HHHHHcC--CCCCCCceEEEeeCChhhHHHHHHHHhcCCCceEEEEeC
Q 017916          319 LELLRSG--KIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  364 (364)
Q Consensus       319 ~~~l~~g--~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  364 (364)
                      ++++.++  .+.+.+.+.++|++  +++++|++.++++. .+|++|+.
T Consensus       317 ~~~~~~~~~~~~~~~~i~~~~~l--~~~~~a~~~~~~~~-~~k~vi~~  361 (361)
T cd08231         317 VRFLERTQDRFPFAELVTHRYPL--EDINEALELAESGT-ALKVVIDP  361 (361)
T ss_pred             HHHHHhccCcCCchhheeeeeeH--HHHHHHHHHHHcCC-ceEEEeCC
Confidence            9999988  55556778899999  99999999998876 58999863

This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quino

>TIGR01202 bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase

Probab=100.00  E-value=6.5e-44  Score=324.82  Aligned_cols=305  Identities=21%  Similarity=0.300  Sum_probs=247.3

Q ss_pred             ceeEEEecCCceEEEEecCCCCCCCcEEEEEeeeeeC-cccHhhhhhcccCCccCCCCcccccceeEEEEEeCCCCCCCC
Q 017916           18 NMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGIC-GSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLV   96 (364)
Q Consensus        18 ~~~~~~~~~~~~~~~~~~~p~~~~~~VlV~v~~~~l~-~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~   96 (364)
                      ++++++.+++.+++.+.+.|+++++||+|||+++++| .+|+..+.|.+.......+|.++|||++|+|+++|+++ .|+
T Consensus         2 ~ka~~~~~~~~l~~~e~~~p~~~~~evlVkv~~~gi~~~~D~~~~~G~~~~~~~~~~P~i~GhE~~G~V~~vG~~v-~~~   80 (308)
T TIGR01202         2 TQAIVLSGPNQIELREVTLTPPSPGDLVVEIWYSGISTGTEKLFWNGLMPPFPGMGYPLVPGYESVGRVVEAGPDT-GFR   80 (308)
T ss_pred             ceEEEEeCCCeEEEEEecCCCCCCCeEEEEEEEEeeccCchhHHhcCCCCCCCCCCCCccCcceeEEEEEEecCCC-CCC
Confidence            5788888889999999999999999999999999997 58988887754322113579999999999999999998 699


Q ss_pred             CCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCccchhhhhhhHHHHHHHHH
Q 017916           97 PGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRR  176 (364)
Q Consensus        97 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~lP~~~~~~~aa~~~~~~~a~~~l~~  176 (364)
                      +||||+..+    ..|..|.               .+..|+|+||++++++.++++|++++++. +++.++.+||+++++
T Consensus        81 vGdrV~~~~----~~c~~~~---------------~~~~G~~aey~~v~~~~~~~ip~~~~~~~-a~~~~~~~a~~~~~~  140 (308)
T TIGR01202        81 PGDRVFVPG----SNCYEDV---------------RGLFGGASKRLVTPASRVCRLDPALGPQG-ALLALAATARHAVAG  140 (308)
T ss_pred             CCCEEEEeC----ccccccc---------------cccCCcccceEEcCHHHceeCCCCCCHHH-HhhhHHHHHHHHHHh
Confidence            999998732    2222211               01359999999999999999999998754 555667899999976


Q ss_pred             cCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcCCCcc
Q 017916          177 ANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGID  256 (364)
Q Consensus       177 ~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d  256 (364)
                      .. .++++|||+|+|++|++++|+|+++|++++++++..++|.+.++.+   .++++..   +           .+.++|
T Consensus       141 ~~-~~~~~vlV~G~G~vG~~a~q~ak~~G~~~v~~~~~~~~rl~~a~~~---~~i~~~~---~-----------~~~g~D  202 (308)
T TIGR01202       141 AE-VKVLPDLIVGHGTLGRLLARLTKAAGGSPPAVWETNPRRRDGATGY---EVLDPEK---D-----------PRRDYR  202 (308)
T ss_pred             cc-cCCCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCHHHHHhhhhc---cccChhh---c-----------cCCCCC
Confidence            53 4689999999999999999999999998787887777776665543   2333211   0           145799


Q ss_pred             EEEECCCCHHHHHHHHHhcccCCEEEEEcCCCCCccccchhhhhcCcEEEeeccC-CCcHHHHHHHHHcCCCCCCCceEE
Q 017916          257 VSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY-KNTWPLCLELLRSGKIDVKPLVTH  335 (364)
Q Consensus       257 ~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~g~~~~~~~~~~  335 (364)
                      ++|||+|+...++.++++++++|+++.+|.......++...++.+++++.+.... .+.++++++++++|++++.+.+++
T Consensus       203 vvid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~g~i~~~~~it~  282 (308)
T TIGR01202       203 AIYDASGDPSLIDTLVRRLAKGGEIVLAGFYTEPVNFDFVPAFMKEARLRIAAEWQPGDLHAVRELIESGALSLDGLITH  282 (308)
T ss_pred             EEEECCCCHHHHHHHHHhhhcCcEEEEEeecCCCcccccchhhhcceEEEEecccchhHHHHHHHHHHcCCCChhhccce
Confidence            9999999877889999999999999999976554556666777888999887765 567999999999999977778899


Q ss_pred             EeeCChhhHHHHHHHHhcCCCceEEEEe
Q 017916          336 RFGFSQKEVEEAFETSARGGTAIKVMFN  363 (364)
Q Consensus       336 ~~~~~~~~~~~a~~~~~~~~~~gkvvv~  363 (364)
                      .|+|  +++++|++.+.++...+|++++
T Consensus       283 ~~~l--~~~~~A~~~~~~~~~~~Kv~~~  308 (308)
T TIGR01202       283 QRPA--SDAAEAYMTAFSDPDCLKMILD  308 (308)
T ss_pred             eecH--HHHHHHHHHHhcCcCceEEEeC
Confidence            9999  9999999998877778999874

>cd05285 sorbitol_DH Sorbitol dehydrogenase

Probab=100.00  E-value=2e-42  Score=320.36  Aligned_cols=338  Identities=58%  Similarity=0.988  Sum_probs=281.8

Q ss_pred             eEEEecCCceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCCCCCCCCCCC
Q 017916           20 AAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGD   99 (364)
Q Consensus        20 ~~~~~~~~~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd   99 (364)
                      ++++.++..+++++.+.|.+.++||+|||.++++|+.|+..+.+...+......|.++|+|++|+|+++|++++.|++||
T Consensus         1 ~~~~~~~~~~~~~~~~~~~l~~~~vlV~v~~~~l~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd   80 (343)
T cd05285           1 AAVLHGPGDLRLEERPIPEPGPGEVLVRVRAVGICGSDVHYYKHGRIGDFVVKEPMVLGHESAGTVVAVGSGVTHLKVGD   80 (343)
T ss_pred             CceEecCCceeEEECCCCCCCCCeEEEEEEEeeEccccHHHHccCCCcccCCCCCcccCcceeEEEEeeCCCCCCCCCCC
Confidence            35778888999999999999999999999999999999987643222222234677899999999999999999999999


Q ss_pred             EEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCccchhhhhhhHHHHHHHHHcCC
Q 017916          100 RVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANI  179 (364)
Q Consensus       100 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~lP~~~~~~~aa~~~~~~~a~~~l~~~~~  179 (364)
                      +|++.+..+|..|.+|+.++.++|.+..++......|+|++|+.+++++++++|+++++++|+.+.++.+|+++++.+++
T Consensus        81 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lP~~~~~~~aa~~~~~~~a~~~~~~~~~  160 (343)
T cd05285          81 RVAIEPGVPCRTCEFCKSGRYNLCPDMRFAATPPVDGTLCRYVNHPADFCHKLPDNVSLEEGALVEPLSVGVHACRRAGV  160 (343)
T ss_pred             EEEEccccCCCCChhHhCcCcccCcCccccccccCCCceeeeEEecHHHcEECcCCCCHHHhhhhhHHHHHHHHHHhcCC
Confidence            99998888999999999999999988655443345799999999999999999999999998877778889988888999


Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCccc---HHHHHHHHHHHcCCCcc
Q 017916          180 GPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQD---IAEEVEKIQKAMGTGID  256 (364)
Q Consensus       180 ~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~---~~~~i~~~~~~~~~~~d  256 (364)
                      ++|++|||+|+|.+|++++|+|+.+|++.++++++++++.++++++|++.+++++.  .+   +.+.++++.  .++++|
T Consensus       161 ~~g~~vlI~g~g~vG~~a~~lak~~G~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~--~~~~~~~~~~~~~~--~~~~~d  236 (343)
T cd05285         161 RPGDTVLVFGAGPIGLLTAAVAKAFGATKVVVTDIDPSRLEFAKELGATHTVNVRT--EDTPESAEKIAELL--GGKGPD  236 (343)
T ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHcCCcEEecccc--ccchhHHHHHHHHh--CCCCCC
Confidence            99999999988999999999999999975788888889999999999998887543  33   355565553  356799


Q ss_pred             EEEECCCCHHHHHHHHHhcccCCEEEEEcCCCCCccccchhhhhcCcEEEeeccCCCcHHHHHHHHHcCCCCCCCceEEE
Q 017916          257 VSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHR  336 (364)
Q Consensus       257 ~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~~~  336 (364)
                      ++|||+|+...++..+++|+++|+++.+|........+......+.+++.+.....+.+++++++++++.+.+.+.+.+.
T Consensus       237 ~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~  316 (343)
T cd05285         237 VVIECTGAESCIQTAIYATRPGGTVVLVGMGKPEVTLPLSAASLREIDIRGVFRYANTYPTAIELLASGKVDVKPLITHR  316 (343)
T ss_pred             EEEECCCCHHHHHHHHHHhhcCCEEEEEccCCCCCccCHHHHhhCCcEEEEeccChHHHHHHHHHHHcCCCCchHhEEEE
Confidence            99999997668899999999999999998544333334445677888888877666788999999999987544556788


Q ss_pred             eeCChhhHHHHHHHHhcCC-CceEEEEe
Q 017916          337 FGFSQKEVEEAFETSARGG-TAIKVMFN  363 (364)
Q Consensus       337 ~~~~~~~~~~a~~~~~~~~-~~gkvvv~  363 (364)
                      |++  +++.+|++.+.++. ..+|++|.
T Consensus       317 ~~l--~~~~~a~~~~~~~~~~~~k~~~~  342 (343)
T cd05285         317 FPL--EDAVEAFETAAKGKKGVIKVVIE  342 (343)
T ss_pred             EeH--HHHHHHHHHHHcCCCCeeEEEEe
Confidence            899  99999999998874 56999873

Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Aldose reductase catalyzes the NADP(H)-dependent conversion of glucose to sorbital, and SDH uses NAD(H) in the conversion of sorbitol to fructose. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>cd08285 NADP_ADH NADP(H)-dependent alcohol dehydrogenases

Probab=100.00  E-value=2.3e-42  Score=321.04  Aligned_cols=338  Identities=30%  Similarity=0.413  Sum_probs=277.4

Q ss_pred             ceeEEEecCCceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCCCCCCCCC
Q 017916           18 NMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVP   97 (364)
Q Consensus        18 ~~~~~~~~~~~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~   97 (364)
                      |+++++.++..+++.+.+.|.+.++||+|||.++++|+.|+....+.+..   ...|.++|+|++|+|+++|++++.+++
T Consensus         1 mka~~~~~~~~~~l~~~~~p~~~~~evlIkv~a~~i~~~d~~~~~g~~~~---~~~~~~~G~e~~G~V~~vG~~v~~~~~   77 (351)
T cd08285           1 MKAFAMLGIGKVGWIEKPIPVCGPNDAIVRPTAVAPCTSDVHTVWGGAPG---ERHGMILGHEAVGVVEEVGSEVKDFKP   77 (351)
T ss_pred             CceEEEccCCccEEEECCCCCCCCCeEEEEEEEEEechhhHHHhcCCCCC---CCCCcccCcceEEEEEEecCCcCccCC
Confidence            57888888888999999999999999999999999999999887765422   356899999999999999999999999


Q ss_pred             CCEEEEcCCcCCCCCccccCCCCCCCCCcccc--ccCCCCCcceeEEEecCC--ceEECCCCCCccchhhhh-hhHHHHH
Q 017916           98 GDRVALEPGISCWRCDHCKGGRYNLCPEMKFF--ATPPVHGSLANQVVHPAD--LCFKLPDNVSLEEGAMCE-PLSVGLH  172 (364)
Q Consensus        98 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~g~~~~~v~~~~~--~~~~lP~~~~~~~aa~~~-~~~~a~~  172 (364)
                      ||+|++.+..+|..|..|..++.++|.+...+  ......|+|++|+.++.+  .++++|+++++.+++.++ .+.+|++
T Consensus        78 Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~~~~~~g~~~~y~~v~~~~~~~~~lP~~~~~~~aa~~~~~~~ta~~  157 (351)
T cd08285          78 GDRVIVPAITPDWRSVAAQRGYPSQSGGMLGGWKFSNFKDGVFAEYFHVNDADANLAPLPDGLTDEQAVMLPDMMSTGFH  157 (351)
T ss_pred             CCEEEEcCcCCCCCCHHHHCcCcccCcCCCCCccccCCCCcceeEEEEcchhhCceEECCCCCCHHHhhhhccchhhHHH
Confidence            99999988789999999999999999875311  112346999999999974  899999999999988774 7889999


Q ss_pred             HHHHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcC
Q 017916          173 ACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMG  252 (364)
Q Consensus       173 ~l~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~  252 (364)
                      +++.+++++|++|||+|+|++|++++|+|+.+|++.++++++++++.++++++|++.++++..  .++.+.++.+.  .+
T Consensus       158 ~~~~~~~~~g~~vlI~g~g~iG~~~~~lak~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~--~~~~~~i~~~~--~~  233 (351)
T cd08285         158 GAELANIKLGDTVAVFGIGPVGLMAVAGARLRGAGRIIAVGSRPNRVELAKEYGATDIVDYKN--GDVVEQILKLT--GG  233 (351)
T ss_pred             HHHccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCceEecCCC--CCHHHHHHHHh--CC
Confidence            987788999999999988999999999999999987888988999999999999988877543  46666665543  35


Q ss_pred             CCccEEEECCCCHHHHHHHHHhcccCCEEEEEcCCCCCc--cccchh--hhhcCcEEEeecc--CCCcHHHHHHHHHcCC
Q 017916          253 TGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEM--TVPLTP--AAVREVDVVGVFR--YKNTWPLCLELLRSGK  326 (364)
Q Consensus       253 ~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~--~~~~~~--~~~~~~~~~~~~~--~~~~~~~~~~~l~~g~  326 (364)
                      .++|++|||+|+.+.+..++++|+++|+++.+|......  ..+...  ...+..++.+...  ..+.++++++++++|+
T Consensus       234 ~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~  313 (351)
T cd08285         234 KGVDAVIIAGGGQDTFEQALKVLKPGGTISNVNYYGEDDYLPIPREEWGVGMGHKTINGGLCPGGRLRMERLASLIEYGR  313 (351)
T ss_pred             CCCcEEEECCCCHHHHHHHHHHhhcCCEEEEecccCCCceeecChhhhhhhccccEEEEeecCCccccHHHHHHHHHcCC
Confidence            689999999998788899999999999999998544321  222111  2234555555443  2567999999999999


Q ss_pred             CCCCC-ceEEEeeCChhhHHHHHHHHhcCC-CceEEEEeC
Q 017916          327 IDVKP-LVTHRFGFSQKEVEEAFETSARGG-TAIKVMFNL  364 (364)
Q Consensus       327 ~~~~~-~~~~~~~~~~~~~~~a~~~~~~~~-~~gkvvv~~  364 (364)
                      +.+.. ...+.|++  +++++|++.++++. ..+|+++++
T Consensus       314 i~~~~~~~~~~~~l--~~~~~a~~~~~~~~~~~~k~~~~~  351 (351)
T cd08285         314 VDPSKLLTHHFFGF--DDIEEALMLMKDKPDDLIKPVIIF  351 (351)
T ss_pred             CChhhceeccccCH--HHHHHHHHHHhcccCCeEEEEEeC
Confidence            85522 34456888  99999999999886 579999875

This group is predominated by atypical alcohol dehydrogenases; they exist as tetramers and exhibit specificity for NADP(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like other zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric ADHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains; however, they do not have and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>cd08256 Zn_ADH2 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=5.3e-42  Score=318.42  Aligned_cols=339  Identities=30%  Similarity=0.578  Sum_probs=281.1

Q ss_pred             ceeEEEecCCceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccC--C----ccCCCCcccccceeEEEEEeCCC
Q 017916           18 NMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCA--D----FVVKEPMVIGHECAGVIEKVGSE   91 (364)
Q Consensus        18 ~~~~~~~~~~~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~--~----~~~~~p~~~G~e~~G~V~~vG~~   91 (364)
                      |+++++.++..+++.+.+.|++.+++|+||+.++++|+.|+..+.|.+..  .    ....+|.++|+|++|+|+++|++
T Consensus         1 mka~~~~~~~~~~~~~~~~p~~~~~~v~V~v~a~~i~~~d~~~~~g~~~~~~~~~~~~~~~~p~~~g~e~~G~v~~vG~~   80 (350)
T cd08256           1 MRAVVCHGPQDYRLEEVPVPRPGPGEILVKVEACGICAGDIKCYHGAPSFWGDENQPPYVKPPMIPGHEFVGRVVELGEG   80 (350)
T ss_pred             CeeEEEecCCceEEEECCCCCCCCCeEEEEEEEEEEcccchhhhcCCCccccccccCccCCCCcccCcceeEEEEEeCCC
Confidence            57888888888999999999999999999999999999999988764210  0    00146789999999999999999


Q ss_pred             CC--CCCCCCEEEEcCCcCCCCCccccCCCCCCCCCcccccc-CCCCCcceeEEEecCC-ceEECCCCCCccchhhhhhh
Q 017916           92 VK--TLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFAT-PPVHGSLANQVVHPAD-LCFKLPDNVSLEEGAMCEPL  167 (364)
Q Consensus        92 v~--~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~v~~~~~-~~~~lP~~~~~~~aa~~~~~  167 (364)
                      ++  +|++||+|++.+..+|+.|++|..++.+.|....+++. ....|+|++|+.++++ .++++|+++++++|+.+.++
T Consensus        81 v~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~lP~~~~~~~aa~~~~~  160 (350)
T cd08256          81 AEERGVKVGDRVISEQIVPCWNCRFCNRGQYWMCQKHDLYGFQNNVNGGMAEYMRFPKEAIVHKVPDDIPPEDAILIEPL  160 (350)
T ss_pred             cccCCCCCCCEEEECCcCCCCCChHHhCcCcccCcCccceeeccCCCCcceeeEEcccccceEECCCCCCHHHHhhhhHH
Confidence            99  99999999999999999999999999999986654433 1246999999999988 57899999999888866788


Q ss_pred             HHHHHHHHHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHH
Q 017916          168 SVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKI  247 (364)
Q Consensus       168 ~~a~~~l~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~  247 (364)
                      .++|++++.+++++|++|||.|+|.+|++++++|+++|+..++++++++++.++++++|++.++++.  ..++.+.+.++
T Consensus       161 ~ta~~a~~~~~~~~g~~vlI~g~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~v~~~~--~~~~~~~~~~~  238 (350)
T cd08256         161 ACALHAVDRANIKFDDVVVLAGAGPLGLGMIGAARLKNPKKLIVLDLKDERLALARKFGADVVLNPP--EVDVVEKIKEL  238 (350)
T ss_pred             HHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCHHHHHHHHHcCCcEEecCC--CcCHHHHHHHH
Confidence            8999998778999999999977799999999999999998888888899999999999998776643  35666666655


Q ss_pred             HHHcCCCccEEEECCCCHHHHHHHHHhcccCCEEEEEcCCCCCccccchhh-hhcCcEEEeeccCCCcHHHHHHHHHcCC
Q 017916          248 QKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPA-AVREVDVVGVFRYKNTWPLCLELLRSGK  326 (364)
Q Consensus       248 ~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~g~  326 (364)
                      .  .+.++|++||++|....+..++++++++|+++.+|............+ ..+++++.+.......+.+++++++++.
T Consensus       239 ~--~~~~vdvvld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~g~  316 (350)
T cd08256         239 T--GGYGCDIYIEATGHPSAVEQGLNMIRKLGRFVEFSVFGDPVTVDWSIIGDRKELDVLGSHLGPYCYPIAIDLIASGR  316 (350)
T ss_pred             h--CCCCCCEEEECCCChHHHHHHHHHhhcCCEEEEEccCCCCCccChhHhhcccccEEEEeccCchhHHHHHHHHHcCC
Confidence            3  245799999999976778899999999999999985433323333322 3566777777666677899999999999


Q ss_pred             CCCCCceEEEeeCChhhHHHHHHHHhcCCCceEEEE
Q 017916          327 IDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMF  362 (364)
Q Consensus       327 ~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv  362 (364)
                      +.+.+.+.+.|++  +++.+|++.++++...+|+++
T Consensus       317 l~~~~~~~~~~~l--~~~~~a~~~~~~~~~~~kvv~  350 (350)
T cd08256         317 LPTDGIVTHQFPL--EDFEEAFELMARGDDSIKVVL  350 (350)
T ss_pred             CChhHheEEEeEH--HHHHHHHHHHHhCCCceEEeC
Confidence            8544346788999  999999999999988999875

This group has the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH,

>cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase

Probab=100.00  E-value=2.6e-42  Score=326.21  Aligned_cols=330  Identities=25%  Similarity=0.372  Sum_probs=263.9

Q ss_pred             cceeEEEecCCceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhh-hhcccCC---ccCCCCcccccceeEEEEEeCCCC
Q 017916           17 VNMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYL-KTLRCAD---FVVKEPMVIGHECAGVIEKVGSEV   92 (364)
Q Consensus        17 ~~~~~~~~~~~~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~-~g~~~~~---~~~~~p~~~G~e~~G~V~~vG~~v   92 (364)
                      .++++++.++..+++.+.|.|+++++||+|||.++|+|++|++.+ .|.....   ....+|.++|||++|+|+++|+++
T Consensus         2 ~~~a~~~~~~~~l~~~e~p~P~~~~~eVlVkV~a~gic~sD~~~~~~g~~~~~~~~~~~~~p~i~GhE~~G~V~~vG~~v   81 (410)
T cd08238           2 KTKAWRMYGKGDLRLEKFELPEIADDEILVRVISDSLCFSTWKLALQGSDHKKVPNDLAKEPVILGHEFAGTILKVGKKW   81 (410)
T ss_pred             CcEEEEEEcCCceEEEecCCCCCCCCeEEEEEEEeccCCCCHHHHhcCCccccCcccccCCCceeccccEEEEEEeCCCc
Confidence            367888888889999999999999999999999999999999876 3432111   012468899999999999999999


Q ss_pred             C-CCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCC----ceEECCCCCCccchhhhhhh
Q 017916           93 K-TLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPAD----LCFKLPDNVSLEEGAMCEPL  167 (364)
Q Consensus        93 ~-~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~----~~~~lP~~~~~~~aa~~~~~  167 (364)
                      + +|++||||++.+...|..|..|..           ++ ...+|+|+||+.++++    +++++|+++++++|+++.++
T Consensus        82 ~~~~~vGdrV~~~~~~~c~~~~~c~~-----------~g-~~~~G~~aey~~v~~~~~~~~~~~lP~~l~~~~aal~epl  149 (410)
T cd08238          82 QGKYKPGQRFVIQPALILPDGPSCPG-----------YS-YTYPGGLATYHIIPNEVMEQDCLLIYEGDGYAEASLVEPL  149 (410)
T ss_pred             cCCCCCCCEEEEcCCcCCCCCCCCCC-----------cc-ccCCCcceEEEEecHHhccCCeEECCCCCCHHHHhhcchH
Confidence            8 699999999988888888877731           01 1246999999999987    68999999999998876444


Q ss_pred             HHH---HHHH---------HHcCCCCCCEEEEEcC-CHHHHHHHHHHHHCC--CCEEEEEecChhHHHHHHHc-------
Q 017916          168 SVG---LHAC---------RRANIGPETNVLIMGA-GPIGLVTMLGARAFG--APRIVIVDVDDYRLSVAKEL-------  225 (364)
Q Consensus       168 ~~a---~~~l---------~~~~~~~g~~VLI~Ga-g~~G~~ai~la~~~g--~~~vv~~~~~~~~~~~~~~l-------  225 (364)
                      +++   +.++         +.+++++|++|+|+|+ |++|++++|+|+++|  +..|++++.+++|.+.++++       
T Consensus       150 ~~~~~~~~a~~~~~~~~~~~~~~~~~g~~VlV~G~~G~vG~~aiq~ak~~G~g~~~Vi~~~~~~~r~~~a~~~~~~~~~~  229 (410)
T cd08238         150 SCVIGAYTANYHLQPGEYRHRMGIKPGGNTAILGGAGPMGLMAIDYAIHGPIGPSLLVVTDVNDERLARAQRLFPPEAAS  229 (410)
T ss_pred             HHHHHHhhhcccccccchhhhcCCCCCCEEEEEeCCCHHHHHHHHHHHhcccCCceEEEEcCCHHHHHHHHHhccccccc
Confidence            433   3322         3467899999999986 999999999999975  45688899999999999997       


Q ss_pred             -CCC-eEEecCCCcccHHHHHHHHHHHcCCCccEEEECCCCHHHHHHHHHhcccCCEEEEEcCC-CC--Cccccchhhhh
Q 017916          226 -GAD-NIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMG-HH--EMTVPLTPAAV  300 (364)
Q Consensus       226 -g~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~-~~--~~~~~~~~~~~  300 (364)
                       |++ .++++.. ..++.+.+++++  .+.++|++||++|++..+..++++++++|+++.++.. ..  ...++...+..
T Consensus       230 ~Ga~~~~i~~~~-~~~~~~~v~~~t--~g~g~D~vid~~g~~~~~~~a~~~l~~~G~~v~~~g~~~~~~~~~~~~~~~~~  306 (410)
T cd08238         230 RGIELLYVNPAT-IDDLHATLMELT--GGQGFDDVFVFVPVPELVEEADTLLAPDGCLNFFAGPVDKNFSAPLNFYNVHY  306 (410)
T ss_pred             cCceEEEECCCc-cccHHHHHHHHh--CCCCCCEEEEcCCCHHHHHHHHHHhccCCeEEEEEccCCCCccccccHHHhhh
Confidence             665 3454322 145666666554  3568999999999888999999999999988776432 11  23455556788


Q ss_pred             cCcEEEeeccC-CCcHHHHHHHHHcCCCCCCCceEEEeeCChhhHHHHHHHHhcCCCceEEEEeC
Q 017916          301 REVDVVGVFRY-KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  364 (364)
Q Consensus       301 ~~~~~~~~~~~-~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  364 (364)
                      +++++.|.... ..+++++++++++|++++.+.++++|+|  +++++|++.+. +...||+++.+
T Consensus       307 ~~~~i~g~~~~~~~~~~~~~~li~~g~i~~~~~it~~~~l--~~~~~A~~~~~-~~~~gKvvl~~  368 (410)
T cd08238         307 NNTHYVGTSGGNTDDMKEAIDLMAAGKLNPARMVTHIGGL--NAAAETTLNLP-GIPGGKKLIYT  368 (410)
T ss_pred             cCcEEEEeCCCCHHHHHHHHHHHHcCCCchhhcEEEEecH--HHHHHHHHHhh-ccCCceEEEEC
Confidence            99999998764 5678999999999999777789999999  99999999999 77889999863

L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found

>cd08296 CAD_like Cinnamyl alcohol dehydrogenases (CAD)

Probab=100.00  E-value=1.1e-41  Score=314.11  Aligned_cols=329  Identities=23%  Similarity=0.373  Sum_probs=278.6

Q ss_pred             ceeEEEecC-CceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCCCCCCCC
Q 017916           18 NMAAWLLGV-NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLV   96 (364)
Q Consensus        18 ~~~~~~~~~-~~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~   96 (364)
                      |+++++..+ ..+++.+.|.|++.++||+||+.++++|+.|+..+.|....   ...|.++|+|++|+|+++|++++.|+
T Consensus         1 m~a~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~---~~~p~~~g~e~~G~v~~vG~~v~~~~   77 (333)
T cd08296           1 YKAVQVTEPGGPLELVERDVPLPGPGEVLIKVEACGVCHSDAFVKEGAMPG---LSYPRVPGHEVVGRIDAVGEGVSRWK   77 (333)
T ss_pred             CeEEEEccCCCCceEEeccCCCCCCCEEEEEEEEEecchHHHHHHhCCCCC---CCCCcccCcceeEEEEEECCCCccCC
Confidence            578888877 68999999999999999999999999999999988764321   34588999999999999999999999


Q ss_pred             CCCEEEEcCC-cCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCccchhhhh-hhHHHHHHH
Q 017916           97 PGDRVALEPG-ISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHAC  174 (364)
Q Consensus        97 ~Gd~V~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~lP~~~~~~~aa~~~-~~~~a~~~l  174 (364)
                      +||+|++.+. ..|.+|.+|..++.+.|.+....+. ..+|+|++|+.++.++++++|+++++.+++.+. .+.+||+++
T Consensus        78 ~Gd~V~~~~~~~~~~~~~~~~~g~~~~c~~~~~~~~-~~~g~~a~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~~  156 (333)
T cd08296          78 VGDRVGVGWHGGHCGTCDACRRGDFVHCENGKVTGV-TRDGGYAEYMLAPAEALARIPDDLDAAEAAPLLCAGVTTFNAL  156 (333)
T ss_pred             CCCEEEeccccCCCCCChhhhCcCcccCCCCCccCc-ccCCcceeEEEEchhheEeCCCCCCHHHhhhhhhhhHHHHHHH
Confidence            9999988553 5699999999999999998765443 346999999999999999999999998888664 788899998


Q ss_pred             HHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcCCC
Q 017916          175 RRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTG  254 (364)
Q Consensus       175 ~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~  254 (364)
                      +...++++++|||+|+|.+|++++++|+++|+ .+++++.++++.++++++|+++++++..  .++.+.++.+     .+
T Consensus       157 ~~~~~~~~~~vlV~g~g~iG~~~~~~a~~~G~-~vi~~~~~~~~~~~~~~~g~~~~i~~~~--~~~~~~~~~~-----~~  228 (333)
T cd08296         157 RNSGAKPGDLVAVQGIGGLGHLAVQYAAKMGF-RTVAISRGSDKADLARKLGAHHYIDTSK--EDVAEALQEL-----GG  228 (333)
T ss_pred             HhcCCCCCCEEEEECCcHHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHcCCcEEecCCC--ccHHHHHHhc-----CC
Confidence            77789999999999999999999999999999 4777778889999999999988877543  4565555543     36


Q ss_pred             ccEEEECCCCHHHHHHHHHhcccCCEEEEEcCCCCCccccchhhhhcCcEEEeeccC-CCcHHHHHHHHHcCCCCCCCce
Q 017916          255 IDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY-KNTWPLCLELLRSGKIDVKPLV  333 (364)
Q Consensus       255 ~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~g~~~~~~~~  333 (364)
                      +|++||+.|.+..+...+++++++|+++.+|.......++...++.+++++.+.... ...+..+++++.++++  .+.+
T Consensus       229 ~d~vi~~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l--~~~v  306 (333)
T cd08296         229 AKLILATAPNAKAISALVGGLAPRGKLLILGAAGEPVAVSPLQLIMGRKSIHGWPSGTALDSEDTLKFSALHGV--RPMV  306 (333)
T ss_pred             CCEEEECCCchHHHHHHHHHcccCCEEEEEecCCCCCCcCHHHHhhcccEEEEeCcCCHHHHHHHHHHHHhCCC--CceE
Confidence            999999998778889999999999999999865444445555566899999998654 5678889999988887  4444


Q ss_pred             EEEeeCChhhHHHHHHHHhcCCCceEEEEe
Q 017916          334 THRFGFSQKEVEEAFETSARGGTAIKVMFN  363 (364)
Q Consensus       334 ~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~  363 (364)
                       ..|++  +++.+||+.++++...||+|++
T Consensus       307 -~~~~~--~~~~~a~~~~~~~~~~gk~v~~  333 (333)
T cd08296         307 -ETFPL--EKANEAYDRMMSGKARFRVVLT  333 (333)
T ss_pred             -EEEEH--HHHHHHHHHHHCCCCceeEEeC
Confidence             67899  9999999999999999999985

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catal

>cd05284 arabinose_DH_like D-arabinose dehydrogenase

Probab=100.00  E-value=1.6e-41  Score=314.11  Aligned_cols=334  Identities=28%  Similarity=0.491  Sum_probs=280.9

Q ss_pred             ceeEEEecC-CceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCCCCCCCC
Q 017916           18 NMAAWLLGV-NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLV   96 (364)
Q Consensus        18 ~~~~~~~~~-~~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~   96 (364)
                      |+++++..+ ..+++.+.+.|++.+++|+|||.++++|+.|+....|.+.......+|.++|+|++|+|+++|++++.|+
T Consensus         1 ~ka~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~G~e~~G~V~~vG~~v~~~~   80 (340)
T cd05284           1 MKAARLYEYGKPLRLEDVPVPEPGPGQVLVRVGGAGVCHSDLHVIDGVWGGILPYKLPFTLGHENAGWVEEVGSGVDGLK   80 (340)
T ss_pred             CeeeEeccCCCCceEEeCCCCCCCCCeEEEEEEEEeecchhHHHHcCCCcccccCCCCeecccceeEEEEEeCCCCCcCc
Confidence            467777755 6788999999999999999999999999999998887654333456689999999999999999999999


Q ss_pred             CCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCccchhhhh-hhHHHHHHHH
Q 017916           97 PGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHACR  175 (364)
Q Consensus        97 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~lP~~~~~~~aa~~~-~~~~a~~~l~  175 (364)
                      +||+|++.+..+|+.|..|..+..++|.+..+.+. ..+|+|++|+.+++++++++|+++++++++.++ .+.+||+++.
T Consensus        81 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~v~~~~~~~~P~~ls~~~aa~l~~~~~ta~~~l~  159 (340)
T cd05284          81 EGDPVVVHPPWGCGTCRYCRRGEENYCENARFPGI-GTDGGFAEYLLVPSRRLVKLPRGLDPVEAAPLADAGLTAYHAVK  159 (340)
T ss_pred             CCCEEEEcCCCCCCCChHHhCcCcccCCCCcccCc-cCCCcceeeEEecHHHeEECCCCCCHHHhhhhcchHHHHHHHHH
Confidence            99999999999999999999999999999988776 568999999999999999999999998888775 7889999985


Q ss_pred             H--cCCCCCCEEEEEcCCHHHHHHHHHHHHCC-CCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcC
Q 017916          176 R--ANIGPETNVLIMGAGPIGLVTMLGARAFG-APRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMG  252 (364)
Q Consensus       176 ~--~~~~~g~~VLI~Gag~~G~~ai~la~~~g-~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~  252 (364)
                      .  ..+.++++|||+|+|.+|++++|+|+.+| . .++++++++++.+.++++|++++++++.  . +.+.++++.  .+
T Consensus       160 ~~~~~~~~~~~vlI~g~~~vg~~~~~~a~~~g~~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~--~-~~~~i~~~~--~~  233 (340)
T cd05284         160 KALPYLDPGSTVVVIGVGGLGHIAVQILRALTPA-TVIAVDRSEEALKLAERLGADHVLNASD--D-VVEEVRELT--GG  233 (340)
T ss_pred             HhcccCCCCCEEEEEcCcHHHHHHHHHHHHhCCC-cEEEEeCCHHHHHHHHHhCCcEEEcCCc--c-HHHHHHHHh--CC
Confidence            4  46889999999999779999999999999 6 5677778888999999999988877543  2 666666553  24


Q ss_pred             CCccEEEECCCCHHHHHHHHHhcccCCEEEEEcCCCCCccccchhhhhcCcEEEeecc-CCCcHHHHHHHHHcCCCCCCC
Q 017916          253 TGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFR-YKNTWPLCLELLRSGKIDVKP  331 (364)
Q Consensus       253 ~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~g~~~~~~  331 (364)
                      .++|+++|++|+.......+++|+++|+++.+|.... ..........+++++.+... ....+.+++++++++.+.  +
T Consensus       234 ~~~dvvld~~g~~~~~~~~~~~l~~~g~~i~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~--~  310 (340)
T cd05284         234 RGADAVIDFVGSDETLALAAKLLAKGGRYVIVGYGGH-GRLPTSDLVPTEISVIGSLWGTRAELVEVVALAESGKVK--V  310 (340)
T ss_pred             CCCCEEEEcCCCHHHHHHHHHHhhcCCEEEEEcCCCC-CccCHHHhhhcceEEEEEecccHHHHHHHHHHHHhCCCC--c
Confidence            5799999999977888999999999999999985442 22333333568888887654 356788999999999984  3


Q ss_pred             ceEEEeeCChhhHHHHHHHHhcCCCceEEEEeC
Q 017916          332 LVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  364 (364)
Q Consensus       332 ~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  364 (364)
                       ..+.|++  +++++|++.++++...||+++.+
T Consensus       311 -~~~~~~~--~~~~~a~~~~~~~~~~gkvv~~~  340 (340)
T cd05284         311 -EITKFPL--EDANEALDRLREGRVTGRAVLVP  340 (340)
T ss_pred             -ceEEEeH--HHHHHHHHHHHcCCccceEEecC
Confidence             3467888  99999999999999999999864

This group contains arabinose dehydrogenase (AraDH) and related alcohol dehydrogenases. AraDH is a member of the medium chain dehydrogenase/reductase family and catalyzes the NAD(P)-dependent oxidation of D-arabinose and other pentoses, the initial step in the metabolism of d-arabinose into 2-oxoglutarate. Like the alcohol dehydrogenases, AraDH binds a zinc in the catalytic cleft as well as a distal structural zinc. AraDH forms homotetramers as a dimer of dimers. AraDH replaces a conserved catalytic His with replace with Arg, compared to the canonical ADH site. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol d

>cd08283 FDH_like_1 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 1

Probab=100.00  E-value=2.3e-41  Score=317.58  Aligned_cols=339  Identities=30%  Similarity=0.485  Sum_probs=278.9

Q ss_pred             ceeEEEecCCceEEEEecCCCC-CCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCCCCCCCC
Q 017916           18 NMAAWLLGVNTLKIQPFELPSL-GPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLV   96 (364)
Q Consensus        18 ~~~~~~~~~~~~~~~~~~~p~~-~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~   96 (364)
                      |+++++.+++.+++.+.+.|.+ .+++|+||+.++++|++|+..+.|.+..   ..+|.++|+|++|+|+++|++++.++
T Consensus         1 m~a~~~~~~~~~~~~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~---~~~p~~~G~e~~G~V~~vG~~v~~~~   77 (386)
T cd08283           1 MKALVWHGKGDVRVEEVPDPKIEDPTDAIVRVTATAICGSDLHLYHGYIPG---MKKGDILGHEFMGVVEEVGPEVRNLK   77 (386)
T ss_pred             CeeEEEecCCCceEEeCCCCCCCCCCeEEEEEEEEecchhhhhhhcCCCCC---CCCCccccccceEEEEEeCCCCCCCC
Confidence            5788888889999999999988 4999999999999999999998886533   34688999999999999999999999


Q ss_pred             CCCEEEEcCCcCCCCCccccCCCCCCCCCccccc-------------------cCCCCCcceeEEEecCC--ceEECCCC
Q 017916           97 PGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFA-------------------TPPVHGSLANQVVHPAD--LCFKLPDN  155 (364)
Q Consensus        97 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~~g~~~~~v~~~~~--~~~~lP~~  155 (364)
                      +||+|++.+..+|+.|.+|+.++.++|+++....                   .....|+|++|+.++++  +++++|++
T Consensus        78 ~Gd~V~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~lp~~  157 (386)
T cd08283          78 VGDRVVVPFTIACGECFYCKRGLYSQCDNTNPSAEMAKLYGHAGAGIFGYSHLTGGYAGGQAEYVRVPFADVGPFKIPDD  157 (386)
T ss_pred             CCCEEEEcCcCCCCCChhhcCCCcccCCCcccccccccccccccccccccccccCCCCCeeEEEEEcccccCeEEECCCC
Confidence            9999999988899999999999999998754321                   01246999999999988  89999999


Q ss_pred             CCccchhhhh-hhHHHHHHHHHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecC
Q 017916          156 VSLEEGAMCE-PLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVS  234 (364)
Q Consensus       156 ~~~~~aa~~~-~~~~a~~~l~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~  234 (364)
                      +++++|+.++ .+.+||++++.+++++|++|||+|+|.+|++++++|+++|+..+++++.++++.+++++++...++++.
T Consensus       158 ~~~~~aa~l~~~~~ta~~~l~~~~~~~g~~VlV~g~G~vG~~~~~la~~~g~~~vi~~~~~~~~~~~~~~~~~~~vi~~~  237 (386)
T cd08283         158 LSDEKALFLSDILPTGYHAAELAEVKPGDTVAVWGCGPVGLFAARSAKLLGAERVIAIDRVPERLEMARSHLGAETINFE  237 (386)
T ss_pred             CCHHHHhhhccchhhhHHHHhhccCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCcEEEcCC
Confidence            9999988765 788999999778899999999998899999999999999986689998999999999998444555543


Q ss_pred             CCcccHHHHHHHHHHHcCCCccEEEECCCC---------------------HHHHHHHHHhcccCCEEEEEcCCCC-Ccc
Q 017916          235 TNLQDIAEEVEKIQKAMGTGIDVSFDCAGF---------------------NKTMSTALSATRAGGKVCLVGMGHH-EMT  292 (364)
Q Consensus       235 ~~~~~~~~~i~~~~~~~~~~~d~vid~~g~---------------------~~~~~~~~~~l~~~G~~v~~g~~~~-~~~  292 (364)
                      .. .++.+.++++.  .+.++|++||++|+                     ...+..++++++++|+++.++.... ...
T Consensus       238 ~~-~~~~~~l~~~~--~~~~~D~vld~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~  314 (386)
T cd08283         238 EV-DDVVEALRELT--GGRGPDVCIDAVGMEAHGSPLHKAEQALLKLETDRPDALREAIQAVRKGGTVSIIGVYGGTVNK  314 (386)
T ss_pred             cc-hHHHHHHHHHc--CCCCCCEEEECCCCcccccccccccccccccccCchHHHHHHHHHhccCCEEEEEcCCCCCcCc
Confidence            31 13666666553  24579999999974                     3467889999999999999985433 222


Q ss_pred             ccchhhhhcCcEEEeeccC-CCcHHHHHHHHHcCCCCCCCceEEEeeCChhhHHHHHHHHhcCC-CceEEEEeC
Q 017916          293 VPLTPAAVREVDVVGVFRY-KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGG-TAIKVMFNL  364 (364)
Q Consensus       293 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~-~~gkvvv~~  364 (364)
                      ........+++++.+.... .+.+++++++++++++...+.+.+.|++  +++.+|++.++++. ..+|++++.
T Consensus       315 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~g~l~~~~~~~~~~~l--~~~~~a~~~~~~~~~~~~k~~~~~  386 (386)
T cd08283         315 FPIGAAMNKGLTLRMGQTHVQRYLPRLLELIESGELDPSFIITHRLPL--EDAPEAYKIFDKKEDGCIKVVLKP  386 (386)
T ss_pred             cCHHHHHhCCcEEEeccCCchHHHHHHHHHHHcCCCChhHceEEEecH--HHHHHHHHHHHhCCCCeEEEEecC
Confidence            3333456788888886544 5678899999999998554456788888  99999999998876 578999863

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. T

>cd08299 alcohol_DH_class_I_II_IV class I, II, IV alcohol dehydrogenases

Probab=100.00  E-value=3.1e-41  Score=315.21  Aligned_cols=338  Identities=27%  Similarity=0.430  Sum_probs=273.5

Q ss_pred             cceeEEEec-CCceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCCCCCCC
Q 017916           17 VNMAAWLLG-VNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTL   95 (364)
Q Consensus        17 ~~~~~~~~~-~~~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~   95 (364)
                      .++++++.. ++.+++++.|.|++.++||+|||+++++|++|++.+.|.+    ...+|.++|+|++|+|+++|++++.+
T Consensus         7 ~~~a~~~~~~~~~~~l~~~p~p~~~~~~vlvkv~~~gi~~~D~~~~~g~~----~~~~p~v~G~e~~G~V~~vG~~v~~~   82 (373)
T cd08299           7 KCKAAVLWEPKKPFSIEEIEVAPPKAHEVRIKIVATGICRSDDHVVSGKL----VTPFPVILGHEAAGIVESVGEGVTTV   82 (373)
T ss_pred             eeEEEEEecCCCCcEEEEeecCCCCCCEEEEEEEEEEcCcccHHHhcCCC----CCCCCccccccceEEEEEeCCCCccC
Confidence            367777664 4679999999999999999999999999999999988754    13568899999999999999999999


Q ss_pred             CCCCEEEEcCCcCCCCCccccCCCCCCCCCcccccc--------------------CCCCCcceeEEEecCCceEECCCC
Q 017916           96 VPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFAT--------------------PPVHGSLANQVVHPADLCFKLPDN  155 (364)
Q Consensus        96 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~g~~~~~v~~~~~~~~~lP~~  155 (364)
                      ++||+|++.+..+|+.|.+|..++.++|.+......                    ....|+|+||+.+++++++++|++
T Consensus        83 ~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~e~~~v~~~~~~~lP~~  162 (373)
T cd08299          83 KPGDKVIPLFVPQCGKCRACLNPESNLCLKNDLGKPQGLMQDGTSRFTCKGKPIHHFLGTSTFSEYTVVDEIAVAKIDAA  162 (373)
T ss_pred             CCCCEEEECCCCCCCCChhhhCCCcccCcCcccccccccccCCccccccCCcccccccCCCcccceEEecccceeeCCCC
Confidence            999999998888999999999999999987643210                    013589999999999999999999


Q ss_pred             CCccchhhhh-hhHHHHHHH-HHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEec
Q 017916          156 VSLEEGAMCE-PLSVGLHAC-RRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKV  233 (364)
Q Consensus       156 ~~~~~aa~~~-~~~~a~~~l-~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~  233 (364)
                      +++++++++. .+.+||+++ +.+++++|++|||+|+|++|++++++|+.+|+..|+++++++++.+.++++|+++++++
T Consensus       163 l~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~VlV~G~g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~a~~lGa~~~i~~  242 (373)
T cd08299         163 APLEKVCLIGCGFSTGYGAAVNTAKVTPGSTCAVFGLGGVGLSAIMGCKAAGASRIIAVDINKDKFAKAKELGATECINP  242 (373)
T ss_pred             CChHHhheeccchHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEecc
Confidence            9999988776 888999886 56889999999999889999999999999999668888889999999999999888875


Q ss_pred             CCCcccHHHHHHHHHHHcCCCccEEEECCCCHHHHHHHHHhc-ccCCEEEEEcCCCCCccccchh-hhhcCcEEEeeccC
Q 017916          234 STNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSAT-RAGGKVCLVGMGHHEMTVPLTP-AAVREVDVVGVFRY  311 (364)
Q Consensus       234 ~~~~~~~~~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l-~~~G~~v~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~  311 (364)
                      .+.++++.+.++++.   ++++|++|||+|++..+..++..+ +++|+++.+|............ ...++.++.+....
T Consensus       243 ~~~~~~~~~~v~~~~---~~~~d~vld~~g~~~~~~~~~~~~~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~  319 (373)
T cd08299         243 QDYKKPIQEVLTEMT---DGGVDFSFEVIGRLDTMKAALASCHEGYGVSVIVGVPPSSQNLSINPMLLLTGRTWKGAVFG  319 (373)
T ss_pred             cccchhHHHHHHHHh---CCCCeEEEECCCCcHHHHHHHHhhccCCCEEEEEccCCCCceeecCHHHHhcCCeEEEEEec
Confidence            443334566666553   357999999999777777766655 6799999998643322222222 23456777776543


Q ss_pred             ----CCcHHHHHHHHHcCCCCCCCceEEEeeCChhhHHHHHHHHhcCCCceEEEEeC
Q 017916          312 ----KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  364 (364)
Q Consensus       312 ----~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  364 (364)
                          ...+.++++.+.++.+++.+.+.+.|++  +++.+|++.++++.. .|+++++
T Consensus       320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l--~e~~~a~~~~~~~~~-~k~~~~~  373 (373)
T cd08299         320 GWKSKDSVPKLVADYMAKKFNLDPLITHTLPF--EKINEGFDLLRSGKS-IRTVLTF  373 (373)
T ss_pred             CCccHHHHHHHHHHHHcCCCCchhheeeeecH--HHHHHHHHHHhCCCc-ceEEEeC
Confidence                2467778888888877666678899999  999999999887754 5888764

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group includes alcohol dehydrogenases corresponding to mammalian classes I, II, IV. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically

>cd08232 idonate-5-DH L-idonate 5-dehydrogenase

Probab=100.00  E-value=3.4e-41  Score=311.77  Aligned_cols=334  Identities=38%  Similarity=0.676  Sum_probs=273.7

Q ss_pred             EEecCCceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCCCCCCCCCCCEE
Q 017916           22 WLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRV  101 (364)
Q Consensus        22 ~~~~~~~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V  101 (364)
                      ++++.+.+++++.++|.++++||+|||.++++|+.|+..............+|.++|+|++|+|+++|+++++|++||+|
T Consensus         2 ~~~~~~~~~~~~~~~p~l~~~~v~I~v~~~~i~~~d~~~~~~~~~~~~~~~~p~~~g~e~~G~v~~vG~~v~~~~~Gd~V   81 (339)
T cd08232           2 VIHAAGDLRVEERPAPEPGPGEVRVRVAAGGICGSDLHYYQHGGFGTVRLREPMVLGHEVSGVVEAVGPGVTGLAPGQRV   81 (339)
T ss_pred             eeccCCceEEEEcCCCCCCCCEEEEEEEEEEECcccHHHHcCCCCCcccccCCeecCccceEEEEeeCCCCCcCCCCCEE
Confidence            56788999999999999999999999999999999988764211111223467899999999999999999999999999


Q ss_pred             EEcCCcCCCCCccccCCCCCCCCCcccccc----CCCCCcceeEEEecCCceEECCCCCCccchhhhhhhHHHHHHHHHc
Q 017916          102 ALEPGISCWRCDHCKGGRYNLCPEMKFFAT----PPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRA  177 (364)
Q Consensus       102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~g~~~~~v~~~~~~~~~lP~~~~~~~aa~~~~~~~a~~~l~~~  177 (364)
                      ++.+..+|+.|.+|..+..+.|.++.+.+.    ...+|+|++|+.+++++++++|+++++++|+.+.+++++|+++...
T Consensus        82 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~iP~~~~~~~aa~~~~~~~a~~~l~~~  161 (339)
T cd08232          82 AVNPSRPCGTCDYCRAGRPNLCLNMRFLGSAMRFPHVQGGFREYLVVDASQCVPLPDGLSLRRAALAEPLAVALHAVNRA  161 (339)
T ss_pred             EEccCCcCCCChHHhCcCcccCccccceeeccccCCCCCceeeEEEechHHeEECcCCCCHHHhhhcchHHHHHHHHHhc
Confidence            999999999999999999999998755442    1247999999999999999999999999888766888999998664


Q ss_pred             CCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcCCCccE
Q 017916          178 NIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDV  257 (364)
Q Consensus       178 ~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~  257 (364)
                      ...++++|||+|+|.+|++++|+|+.+|+..+++++.++++.++++++|++.+++++..  +    ++.+.. ...++|+
T Consensus       162 ~~~~~~~VLI~g~g~vG~~~~~lak~~G~~~v~~~~~s~~~~~~~~~~g~~~vi~~~~~--~----~~~~~~-~~~~vd~  234 (339)
T cd08232         162 GDLAGKRVLVTGAGPIGALVVAAARRAGAAEIVATDLADAPLAVARAMGADETVNLARD--P----LAAYAA-DKGDFDV  234 (339)
T ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHcCCCEEEcCCch--h----hhhhhc-cCCCccE
Confidence            43499999998889999999999999999667888888888889999999888775432  2    222221 2346999


Q ss_pred             EEECCCCHHHHHHHHHhcccCCEEEEEcCCCCCccccchhhhhcCcEEEeeccCCCcHHHHHHHHHcCCCCCCCceEEEe
Q 017916          258 SFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRF  337 (364)
Q Consensus       258 vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~  337 (364)
                      +||+.|+...++..+++|+++|+++.++............+..+++++.+.....+.+++++++++++.+.+.+.+.+.|
T Consensus       235 vld~~g~~~~~~~~~~~L~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  314 (339)
T cd08232         235 VFEASGAPAALASALRVVRPGGTVVQVGMLGGPVPLPLNALVAKELDLRGSFRFDDEFAEAVRLLAAGRIDVRPLITAVF  314 (339)
T ss_pred             EEECCCCHHHHHHHHHHHhcCCEEEEEecCCCCccCcHHHHhhcceEEEEEecCHHHHHHHHHHHHcCCCCchhheeEEe
Confidence            99999976788999999999999999975332222333344567788877766667789999999999986556677889


Q ss_pred             eCChhhHHHHHHHHhcCCCceEEEEeC
Q 017916          338 GFSQKEVEEAFETSARGGTAIKVMFNL  364 (364)
Q Consensus       338 ~~~~~~~~~a~~~~~~~~~~gkvvv~~  364 (364)
                      ++  +++++|++.+.++...||+|+++
T Consensus       315 ~~--~~~~~a~~~~~~~~~~gkvvv~~  339 (339)
T cd08232         315 PL--EEAAEAFALAADRTRSVKVQLSF  339 (339)
T ss_pred             cH--HHHHHHHHHHHhCCCceeEEEeC
Confidence            88  99999999999888899999874

L-idonate 5-dehydrogenase (L-ido 5-DH ) catalyzes the conversion of L-lodonate to 5-ketogluconate in the metabolism of L-Idonate to 6-P-gluconate. In E. coli, this GntII pathway is a subsidiary pathway to the canonical GntI system, which also phosphorylates and transports gluconate. L-ido 5-DH is found in an operon with a regulator indR, transporter idnT, 5-keto-D-gluconate 5-reductase, and Gnt kinase. L-ido 5-DH is a zinc-dependent alcohol dehydrogenase-like protein. The alcohol dehydrogenase ADH-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) which displays a broad range of activities and are distinguished from the smaller short chain dehydrogenases(~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domai

>PRK05396 tdh L-threonine 3-dehydrogenase; Validated

Probab=100.00  E-value=8.6e-41  Score=309.27  Aligned_cols=337  Identities=32%  Similarity=0.569  Sum_probs=274.4

Q ss_pred             ceeEEEecC-CceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCCCCCCCC
Q 017916           18 NMAAWLLGV-NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLV   96 (364)
Q Consensus        18 ~~~~~~~~~-~~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~   96 (364)
                      ||++.+.++ +.+++.+.|.|.++++||+||+.++++|+.|+.++.+..........|.++|+|++|+|+++|++++.++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~v~~~d~~~~~~~~~~~~~~~~p~~~g~e~~G~V~~vG~~v~~~~   80 (341)
T PRK05396          1 MKALVKLKAEPGLWLTDVPVPEPGPNDVLIKVKKTAICGTDVHIYNWDEWAQKTIPVPMVVGHEFVGEVVEVGSEVTGFK   80 (341)
T ss_pred             CceEEEecCCCceEEEECCCCCCCCCeEEEEEEEEEEcccchHhhcCCCcccccCCCCcccceeeEEEEEEeCCCCCcCC
Confidence            356666544 5799999999999999999999999999999987765322111234678999999999999999999999


Q ss_pred             CCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCccchhhhhhhHHHHHHHHH
Q 017916           97 PGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRR  176 (364)
Q Consensus        97 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~lP~~~~~~~aa~~~~~~~a~~~l~~  176 (364)
                      +||+|++.+..+|..|..|..+++++|.+..+.+ ...+|+|++|+.++.++++++|+++++.+++.+..+.++++++..
T Consensus        81 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~v~~~~~~~iP~~l~~~~~~~~~~~~~~~~~~~~  159 (341)
T PRK05396         81 VGDRVSGEGHIVCGHCRNCRAGRRHLCRNTKGVG-VNRPGAFAEYLVIPAFNVWKIPDDIPDDLAAIFDPFGNAVHTALS  159 (341)
T ss_pred             CCCEEEECCCCCCCCChhhhCcChhhCCCcceee-ecCCCcceeeEEechHHeEECcCCCCHHHhHhhhHHHHHHHHHHc
Confidence            9999999999999999999999999998754333 346799999999999999999999998888766676777665533


Q ss_pred             cCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcCCCcc
Q 017916          177 ANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGID  256 (364)
Q Consensus       177 ~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d  256 (364)
                       ...+|++|+|+|+|++|++++|+|+++|++.+++++.++++.++++++|++.+++++.  .++.+.++.+.  .++++|
T Consensus       160 -~~~~g~~vlV~~~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~lg~~~~~~~~~--~~~~~~~~~~~--~~~~~d  234 (341)
T PRK05396        160 -FDLVGEDVLITGAGPIGIMAAAVAKHVGARHVVITDVNEYRLELARKMGATRAVNVAK--EDLRDVMAELG--MTEGFD  234 (341)
T ss_pred             -CCCCCCeEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhCCcEEecCcc--ccHHHHHHHhc--CCCCCC
Confidence             3468999999888999999999999999976777788889999999999998877543  46666666553  256899


Q ss_pred             EEEECCCCHHHHHHHHHhcccCCEEEEEcCCCCCccccchhhhhcCcEEEeeccC--CCcHHHHHHHHHcCCCCCCCceE
Q 017916          257 VSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY--KNTWPLCLELLRSGKIDVKPLVT  334 (364)
Q Consensus       257 ~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~g~~~~~~~~~  334 (364)
                      ++|||.|+...+..++++|+++|+++.+|.......+....+..+++++.+....  ...+..++++++++ +.+.+.+.
T Consensus       235 ~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~  313 (341)
T PRK05396        235 VGLEMSGAPSAFRQMLDNMNHGGRIAMLGIPPGDMAIDWNKVIFKGLTIKGIYGREMFETWYKMSALLQSG-LDLSPIIT  313 (341)
T ss_pred             EEEECCCCHHHHHHHHHHHhcCCEEEEEecCCCCCcccHHHHhhcceEEEEEEccCccchHHHHHHHHHcC-CChhHheE
Confidence            9999999888889999999999999999865444444445666788887776422  34566788899988 43355677


Q ss_pred             EEeeCChhhHHHHHHHHhcCCCceEEEEeC
Q 017916          335 HRFGFSQKEVEEAFETSARGGTAIKVMFNL  364 (364)
Q Consensus       335 ~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  364 (364)
                      +.|++  +++.+|++.+.++. .||+++++
T Consensus       314 ~~~~l--~~~~~a~~~~~~~~-~gk~vv~~  340 (341)
T PRK05396        314 HRFPI--DDFQKGFEAMRSGQ-SGKVILDW  340 (341)
T ss_pred             EEEeH--HHHHHHHHHHhcCC-CceEEEec
Confidence            88898  99999999998876 79999875

>cd05278 FDH_like Formaldehyde dehydrogenases

Probab=100.00  E-value=1.1e-40  Score=309.28  Aligned_cols=338  Identities=33%  Similarity=0.533  Sum_probs=277.4

Q ss_pred             ceeEEEecCCceEEEEecCCCC-CCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCCCCCCCC
Q 017916           18 NMAAWLLGVNTLKIQPFELPSL-GPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLV   96 (364)
Q Consensus        18 ~~~~~~~~~~~~~~~~~~~p~~-~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~   96 (364)
                      |+++++.+++.+++.+.|.|.+ .+++|+|||.++++|+.|+....|.+..   ..+|.++|+|++|+|+++|++++.++
T Consensus         1 ~ka~~~~~~~~~~~~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~---~~~~~~~g~e~~G~V~~vG~~v~~~~   77 (347)
T cd05278           1 MKALVYLGPGKIGLEEVPDPKIQGPHDAIVRVTATSICGSDLHIYRGGVPG---AKHGMILGHEFVGEVVEVGSDVKRLK   77 (347)
T ss_pred             CceEEEecCCceEEEEcCCCCCCCCCeEEEEEEEEEechhhHHHHcCCCCC---CCCCceeccceEEEEEEECCCccccC
Confidence            4678888888899999999998 8999999999999999999988775532   45688999999999999999999999


Q ss_pred             CCCEEEEcCCcCCCCCccccCCCCCCCCCccccc--cCCCCCcceeEEEecCC--ceEECCCCCCccchhhhh-hhHHHH
Q 017916           97 PGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFA--TPPVHGSLANQVVHPAD--LCFKLPDNVSLEEGAMCE-PLSVGL  171 (364)
Q Consensus        97 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~g~~~~~v~~~~~--~~~~lP~~~~~~~aa~~~-~~~~a~  171 (364)
                      +||+|++.+..+|+.|.+|+.+..+.|.++....  .....|+|++|+.++++  +++++|+++++++|+.++ .+.+||
T Consensus        78 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~lP~~~~~~~aa~l~~~~~ta~  157 (347)
T cd05278          78 PGDRVSVPCITFCGRCRFCRRGYHAHCENGLWGWKLGNRIDGGQAEYVRVPYADMNLAKIPDGLPDEDALMLSDILPTGF  157 (347)
T ss_pred             CCCEEEecCCCCCCCChhHhCcCcccCcCCCcccccccCCCCeeeEEEEecchhCeEEECCCCCCHHHHhhhcchhhhee
Confidence            9999999999999999999999999998765332  12346999999999997  999999999999988775 789999


Q ss_pred             HHHHHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHc
Q 017916          172 HACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAM  251 (364)
Q Consensus       172 ~~l~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~  251 (364)
                      +++...++++|++|||+|+|.+|++++|+|+.+|...++++++++++.++++++|++.++++..  .++.+.++...  .
T Consensus       158 ~~~~~~~~~~~~~VlI~g~g~vg~~~iqlak~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~--~~~~~~i~~~~--~  233 (347)
T cd05278         158 HGAELAGIKPGSTVAVIGAGPVGLCAVAGARLLGAARIIAVDSNPERLDLAKEAGATDIINPKN--GDIVEQILELT--G  233 (347)
T ss_pred             ehhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHhCCcEEEcCCc--chHHHHHHHHc--C
Confidence            9987788999999999877999999999999999756778888888999999999888877543  45666666543  2


Q ss_pred             CCCccEEEECCCCHHHHHHHHHhcccCCEEEEEcCCCCCccccch-hhhhcCcEEEeeccC-CCcHHHHHHHHHcCCCCC
Q 017916          252 GTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLT-PAAVREVDVVGVFRY-KNTWPLCLELLRSGKIDV  329 (364)
Q Consensus       252 ~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~l~~g~~~~  329 (364)
                      ++++|++||++|+...+...+++|+++|+++.+|........... ....+++++.+.... .+.++++++++.++.+.+
T Consensus       234 ~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  313 (347)
T cd05278         234 GRGVDCVIEAVGFEETFEQAVKVVRPGGTIANVGVYGKPDPLPLLGEWFGKNLTFKTGLVPVRARMPELLDLIEEGKIDP  313 (347)
T ss_pred             CCCCcEEEEccCCHHHHHHHHHHhhcCCEEEEEcCCCCCcccCccchhhhceeEEEeeccCchhHHHHHHHHHHcCCCCh
Confidence            468999999999767889999999999999999854332211111 223566666664332 467899999999999854


Q ss_pred             CCceEEEeeCChhhHHHHHHHHhcCCC-ceEEEEeC
Q 017916          330 KPLVTHRFGFSQKEVEEAFETSARGGT-AIKVMFNL  364 (364)
Q Consensus       330 ~~~~~~~~~~~~~~~~~a~~~~~~~~~-~gkvvv~~  364 (364)
                      .+.+...|++  +++++|++.+..+.. .+|++++.
T Consensus       314 ~~~~~~~~~~--~~~~~a~~~~~~~~~~~~~~vv~~  347 (347)
T cd05278         314 SKLITHRFPL--DDILKAYRLFDNKPDGCIKVVIRP  347 (347)
T ss_pred             hHcEEEEecH--HHHHHHHHHHhcCCCCceEEEecC
Confidence            4346688888  999999999988776 78999863

Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (aka ADH3) may be the ancestral form of alcohol dehydrogenase, which evolved to detoxify formaldehyde. This CD contains glutathione dependant FDH, glutathione independent FDH, and related alcohol dehydrogenases. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typicall

>cd08286 FDH_like_ADH2 formaldehyde dehydrogenase (FDH)-like

Probab=100.00  E-value=1.9e-40  Score=307.50  Aligned_cols=338  Identities=32%  Similarity=0.538  Sum_probs=280.5

Q ss_pred             ceeEEEecCCceEEEEecCCCC-CCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCCCCCCCC
Q 017916           18 NMAAWLLGVNTLKIQPFELPSL-GPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLV   96 (364)
Q Consensus        18 ~~~~~~~~~~~~~~~~~~~p~~-~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~   96 (364)
                      |+++++.++..+++.+.+.|++ .++||+|||.++++|+.|+..+.|.+..   ...|.++|+|++|+|+++|++++.++
T Consensus         1 m~a~~~~~~~~~~~~~~~~p~~~~~~ev~v~v~a~~i~~~d~~~~~g~~~~---~~~~~~~g~e~~G~V~~~G~~v~~~~   77 (345)
T cd08286           1 MKALVYHGPGKISWEDRPKPTIQEPTDAIVKMLKTTICGTDLHILKGDVPT---VTPGRILGHEGVGVVEEVGSAVTNFK   77 (345)
T ss_pred             CceEEEecCCceeEEecCCCCCCCCCeEEEEEEEeeecchhhHHHcCCCCC---CCCCceecccceEEEEEeccCccccC
Confidence            4677788788899999999985 8999999999999999999988875432   23478999999999999999999999


Q ss_pred             CCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCC--ceEECCCCCCccchhhhh-hhHHHHHH
Q 017916           97 PGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPAD--LCFKLPDNVSLEEGAMCE-PLSVGLHA  173 (364)
Q Consensus        97 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~--~~~~lP~~~~~~~aa~~~-~~~~a~~~  173 (364)
                      +||+|++.+...|..|++|..+..+.|....+..+...+|+|++|+.++++  .++++|++++..+++.+. .+++||.+
T Consensus        78 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~  157 (345)
T cd08286          78 VGDRVLISCISSCGTCGYCRKGLYSHCESGGWILGNLIDGTQAEYVRIPHADNSLYKLPEGVDEEAAVMLSDILPTGYEC  157 (345)
T ss_pred             CCCEEEECCcCCCCCChHHHCcCcccCCCcccccccccCCeeeeEEEcccccCceEECCCCCCHHHhhhccchhHHHHHH
Confidence            999999998888999999999988888877665444467999999999987  999999999988888664 77889987


Q ss_pred             H-HHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcC
Q 017916          174 C-RRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMG  252 (364)
Q Consensus       174 l-~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~  252 (364)
                      + +..++++|++|||+|+|++|++++|+|+.+|+..+++++.++++.++++++|++.++++..  .++...+.++.  .+
T Consensus       158 ~~~~~~~~~g~~vlI~g~g~~g~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~--~~~~~~i~~~~--~~  233 (345)
T cd08286         158 GVLNGKVKPGDTVAIVGAGPVGLAALLTAQLYSPSKIIMVDLDDNRLEVAKKLGATHTVNSAK--GDAIEQVLELT--DG  233 (345)
T ss_pred             HHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCCceecccc--ccHHHHHHHHh--CC
Confidence            6 5688999999999988999999999999999546777888889999999999988877543  45666665554  24


Q ss_pred             CCccEEEECCCCHHHHHHHHHhcccCCEEEEEcCCCCCccccchhhhhcCcEEEeeccCCCcHHHHHHHHHcCCCCCCCc
Q 017916          253 TGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPL  332 (364)
Q Consensus       253 ~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~~  332 (364)
                      .++|++|||+|....+..++++|+++|+++.+|.......++...+..+++++.+.......+++++++++++.+.+.+.
T Consensus       234 ~~~d~vld~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  313 (345)
T cd08286         234 RGVDVVIEAVGIPATFELCQELVAPGGHIANVGVHGKPVDLHLEKLWIKNITITTGLVDTNTTPMLLKLVSSGKLDPSKL  313 (345)
T ss_pred             CCCCEEEECCCCHHHHHHHHHhccCCcEEEEecccCCCCCcCHHHHhhcCcEEEeecCchhhHHHHHHHHHcCCCChHHc
Confidence            67999999999878889999999999999999864433444445556688888775544467888999999999865555


Q ss_pred             eEEEeeCChhhHHHHHHHHhcCC--CceEEEEeC
Q 017916          333 VTHRFGFSQKEVEEAFETSARGG--TAIKVMFNL  364 (364)
Q Consensus       333 ~~~~~~~~~~~~~~a~~~~~~~~--~~gkvvv~~  364 (364)
                      +.++|++  +++++|++.+++..  ...|+++++
T Consensus       314 ~~~~~~l--~~~~~a~~~~~~~~~~~~~k~~~~~  345 (345)
T cd08286         314 VTHRFKL--SEIEKAYDTFSAAAKHKALKVIIDF  345 (345)
T ss_pred             EEeEeeH--HHHHHHHHHHhccCCCCeeEEEEeC
Confidence            7788999  99999999998763  456999875

This group is related to formaldehyde dehydrogenase (FDH), which is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. This family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Another member is identified as a dihydroxyacetone reductase. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (

>cd05279 Zn_ADH1 Liver alcohol dehydrogenase and related zinc-dependent alcohol dehydrogenases

Probab=100.00  E-value=1.4e-40  Score=310.32  Aligned_cols=334  Identities=28%  Similarity=0.473  Sum_probs=275.2

Q ss_pred             eeEEEe-cCCceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCCCCCCCCC
Q 017916           19 MAAWLL-GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVP   97 (364)
Q Consensus        19 ~~~~~~-~~~~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~   97 (364)
                      +++++. ++..+++.+.+.|.+++++|+||+.++++|+.|++.+.+.+.    ...|.++|+|++|+|+++|++++++++
T Consensus         2 ~a~~~~~~~~~~~~~~~~~p~~~~~~vlv~v~~~~i~~~d~~~~~g~~~----~~~~~i~g~e~~G~V~~vG~~v~~~~~   77 (365)
T cd05279           2 KAAVLWEKGKPLSIEEIEVAPPKAGEVRIKVVATGVCHTDLHVIDGKLP----TPLPVILGHEGAGIVESIGPGVTTLKP   77 (365)
T ss_pred             ceeEEecCCCCcEEEEeecCCCCCCeEEEEEEEeeecchhHHHhcCCCC----CCCCcccccceeEEEEEeCCCcccCCC
Confidence            466666 456899999999999999999999999999999998876432    346789999999999999999999999


Q ss_pred             CCEEEEcCCcCCCCCccccCCCCCCCCCccccccCC--------------------CCCcceeEEEecCCceEECCCCCC
Q 017916           98 GDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPP--------------------VHGSLANQVVHPADLCFKLPDNVS  157 (364)
Q Consensus        98 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~g~~~~~v~~~~~~~~~lP~~~~  157 (364)
                      ||+|++.+...|..|.+|+.+++++|......+..+                    ..|+|++|+.++++.++++|++++
T Consensus        78 Gd~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP~~~~  157 (365)
T cd05279          78 GDKVIPLFGPQCGKCKQCLNPRPNLCSKSRGTNGRGLMSDGTSRFTCKGKPIHHFLGTSTFAEYTVVSEISLAKIDPDAP  157 (365)
T ss_pred             CCEEEEcCCCCCCCChhhcCCCcccCCCcccccccccccCCcceeeccCCccccccccccccceEEecCCceEECCCCCC
Confidence            999999988899999999999999997765432100                    247999999999999999999999


Q ss_pred             ccchhhhh-hhHHHHHHH-HHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCC
Q 017916          158 LEEGAMCE-PLSVGLHAC-RRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVST  235 (364)
Q Consensus       158 ~~~aa~~~-~~~~a~~~l-~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~  235 (364)
                      +++|+.+. .+.+||+++ +.+++++|++|||+|+|++|++++++|+.+|++.++++++++++.++++++|++++++...
T Consensus       158 ~~~a~~~~~~~~ta~~al~~~~~~~~g~~vlI~g~g~vG~~a~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~  237 (365)
T cd05279         158 LEKVCLIGCGFSTGYGAAVNTAKVTPGSTCAVFGLGGVGLSVIMGCKAAGASRIIAVDINKDKFEKAKQLGATECINPRD  237 (365)
T ss_pred             HHHhhHhccchhHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHhCCCeeccccc
Confidence            99888776 788999887 5688999999999988999999999999999987888888999999999999988776543


Q ss_pred             CcccHHHHHHHHHHHcCCCccEEEECCCCHHHHHHHHHhcc-cCCEEEEEcCCC--CCccccchhhhhcCcEEEeecc--
Q 017916          236 NLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATR-AGGKVCLVGMGH--HEMTVPLTPAAVREVDVVGVFR--  310 (364)
Q Consensus       236 ~~~~~~~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~-~~G~~v~~g~~~--~~~~~~~~~~~~~~~~~~~~~~--  310 (364)
                      .+.++.+.++++.   ++++|++||++|+...+...+++++ ++|+++.+|...  ....+....+ .+..++.+.+.  
T Consensus       238 ~~~~~~~~l~~~~---~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~l~g~~~~~  313 (365)
T cd05279         238 QDKPIVEVLTEMT---DGGVDYAFEVIGSADTLKQALDATRLGGGTSVVVGVPPSGTEATLDPNDL-LTGRTIKGTVFGG  313 (365)
T ss_pred             ccchHHHHHHHHh---CCCCcEEEECCCCHHHHHHHHHHhccCCCEEEEEecCCCCCceeeCHHHH-hcCCeEEEEeccC
Confidence            2225666666553   4689999999997788899999999 999999998543  2333444444 56677776543  


Q ss_pred             --CCCcHHHHHHHHHcCCCCCCCceEEEeeCChhhHHHHHHHHhcCCCceEEEEe
Q 017916          311 --YKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFN  363 (364)
Q Consensus       311 --~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~  363 (364)
                        ..+.+.+++++++++.+.+.+...++|++  +++++|++.++++.. .|++++
T Consensus       314 ~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~l--~~~~~a~~~~~~~~~-~~~~~~  365 (365)
T cd05279         314 WKSKDSVPKLVALYRQKKFPLDELITHVLPF--EEINDGFDLMRSGES-IRTILT  365 (365)
T ss_pred             CchHhHHHHHHHHHHcCCcchhHheeeeecH--HHHHHHHHHHhCCCc-eeeeeC
Confidence              35678899999999998655567888999  999999999987754 466653

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall

>cd08246 crotonyl_coA_red crotonyl-CoA reductase

Probab=100.00  E-value=1.3e-40  Score=313.69  Aligned_cols=342  Identities=22%  Similarity=0.250  Sum_probs=277.7

Q ss_pred             chhcceeEEEec-----C-CceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCcc------CCC-Ccccccc
Q 017916           14 GEEVNMAAWLLG-----V-NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFV------VKE-PMVIGHE   80 (364)
Q Consensus        14 ~~~~~~~~~~~~-----~-~~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~------~~~-p~~~G~e   80 (364)
                      .+.+|+++++..     + ..+++.+.|.|.++++||+|||.++++|..|+....|.....+.      ... +.++|+|
T Consensus         9 ~~~~~~a~~~~~~~~g~~~~~~~~~~~~~p~l~~~evlI~v~~~gi~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~G~e   88 (393)
T cd08246           9 VPEKMYAFAIRPERYGDPAQAIQLEDVPVPELGPGEVLVAVMAAGVNYNNVWAALGEPVSTFAARQRRGRDEPYHIGGSD   88 (393)
T ss_pred             CchhhhheeeecccCCCcccceEEeecCCCCCCCCEEEEEEEEEeeccchhhhhcCCCccccccccccCCCCCccccccc
Confidence            456688887642     2 36899999999999999999999999999999887664211000      012 3589999


Q ss_pred             eeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCccc
Q 017916           81 CAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEE  160 (364)
Q Consensus        81 ~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~lP~~~~~~~  160 (364)
                      ++|+|+++|++++.+++||+|++.+...|+.|+.|..+..++|.+..+++....+|+|++|+.++..+++++|+++++++
T Consensus        89 ~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~g~~~~~g~~a~y~~v~~~~l~~iP~~l~~~~  168 (393)
T cd08246          89 ASGIVWAVGEGVKNWKVGDEVVVHCSVWDGNDPERAGGDPMFDPSQRIWGYETNYGSFAQFALVQATQLMPKPKHLSWEE  168 (393)
T ss_pred             eEEEEEEeCCCCCcCCCCCEEEEeccccccCcccccccccccccccccccccCCCCcceeEEEechHHeEECCCCCCHHH
Confidence            99999999999999999999999999999999999999999999877777656679999999999999999999999988


Q ss_pred             hhhhh-hhHHHHHHHHH---cCCCCCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCC
Q 017916          161 GAMCE-PLSVGLHACRR---ANIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVST  235 (364)
Q Consensus       161 aa~~~-~~~~a~~~l~~---~~~~~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~  235 (364)
                      ++.+. .+.+||+++..   +++++|++|||+|+ |.+|++++++|+.+|++ +++++.++++.++++++|++.++++++
T Consensus       169 aa~l~~~~~tA~~al~~~~~~~~~~g~~vlV~ga~g~iG~a~~~lak~~G~~-vv~~~~s~~~~~~~~~~G~~~~i~~~~  247 (393)
T cd08246         169 AAAYMLVGATAYRMLFGWNPNTVKPGDNVLIWGASGGLGSMAIQLARAAGAN-PVAVVSSEEKAEYCRALGAEGVINRRD  247 (393)
T ss_pred             HhhhcccHHHHHHHHhhcccccCCCCCEEEEECCCcHHHHHHHHHHHHcCCe-EEEEeCCHHHHHHHHHcCCCEEEcccc
Confidence            87654 88999999843   67899999999997 99999999999999995 556678899999999999998887533


Q ss_pred             Cc--------------------ccHHHHHHHHHHHcCC-CccEEEECCCCHHHHHHHHHhcccCCEEEEEcCCCC-Cccc
Q 017916          236 NL--------------------QDIAEEVEKIQKAMGT-GIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHH-EMTV  293 (364)
Q Consensus       236 ~~--------------------~~~~~~i~~~~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~  293 (364)
                      .+                    ..+.+.+.++.  .+. ++|++||++|+ ..+...+++++++|+++.+|.... ....
T Consensus       248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~--~~~~g~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~  324 (393)
T cd08246         248 FDHWGVLPDVNSEAYTAWTKEARRFGKAIWDIL--GGREDPDIVFEHPGR-ATFPTSVFVCDRGGMVVICAGTTGYNHTY  324 (393)
T ss_pred             cccccccccccchhhhhhhhccchHHHHHHHHh--CCCCCCeEEEECCch-HhHHHHHHHhccCCEEEEEcccCCCCCCC
Confidence            11                    12444454443  244 79999999994 778899999999999999985332 2234


Q ss_pred             cchhhhhcCcEEEeeccC-CCcHHHHHHHHHcCCCCCCCceEEEeeCChhhHHHHHHHHhcC-CCceEEEEe
Q 017916          294 PLTPAAVREVDVVGVFRY-KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARG-GTAIKVMFN  363 (364)
Q Consensus       294 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~-~~~gkvvv~  363 (364)
                      ....+..++.++.+.... .+.+.+++++++++.+  .+.+.++|++  +++++|++.+.++ ...||+++-
T Consensus       325 ~~~~l~~~~~~i~g~~~~~~~~~~~~~~~~~~~~l--~~~~~~~~~l--~~~~~a~~~~~~~~~~~gkvvv~  392 (393)
T cd08246         325 DNRYLWMRQKRIQGSHFANDREAAEANRLVMKGRI--DPCLSKVFSL--DETPDAHQLMHRNQHHVGNMAVL  392 (393)
T ss_pred             cHHHHhhheeEEEecccCcHHHHHHHHHHHHcCCc--eeeeeEEEeH--HHHHHHHHHHHhCccccceEEEe
Confidence            445566777788776554 4578899999999988  4557788999  9999999999998 789999874

Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossma

>cd08284 FDH_like_2 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 2

Probab=100.00  E-value=2.1e-40  Score=307.06  Aligned_cols=334  Identities=30%  Similarity=0.508  Sum_probs=275.7

Q ss_pred             ceeEEEecCCceEEEEecCCCCC-CCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCCCCCCCC
Q 017916           18 NMAAWLLGVNTLKIQPFELPSLG-PYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLV   96 (364)
Q Consensus        18 ~~~~~~~~~~~~~~~~~~~p~~~-~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~   96 (364)
                      |+++++.++..+++.+.++|++. +++|+|||.++++|+.|+....|.+.    ...|.++|+|++|+|+++|+++++++
T Consensus         1 ~~a~~~~~~~~~~~~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~----~~~~~~~g~e~~G~V~~vG~~v~~~~   76 (344)
T cd08284           1 MKAVVFKGPGDVRVEEVPIPQIQDPTDAIVKVTAAAICGSDLHIYRGHIP----STPGFVLGHEFVGEVVEVGPEVRTLK   76 (344)
T ss_pred             CeeEEEecCCCceEEeccCCCCCCCCeEEEEEEEeeccccchhhhcCCCC----CCCCcccccceEEEEEeeCCCccccC
Confidence            46777777889999999999985 99999999999999999988876442    34578999999999999999999999


Q ss_pred             CCCEEEEcCCcCCCCCccccCCCCCCCCCcccc---ccCCCCCcceeEEEecCC--ceEECCCCCCccchhhhh-hhHHH
Q 017916           97 PGDRVALEPGISCWRCDHCKGGRYNLCPEMKFF---ATPPVHGSLANQVVHPAD--LCFKLPDNVSLEEGAMCE-PLSVG  170 (364)
Q Consensus        97 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g~~~~~v~~~~~--~~~~lP~~~~~~~aa~~~-~~~~a  170 (364)
                      +||+|++.+..+|++|.+|..+..+.|.+...+   +....+|+|++|+.++++  +++++|+++++++++.+. .+.+|
T Consensus        77 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~~p~~l~~~~a~~l~~~~~ta  156 (344)
T cd08284          77 VGDRVVSPFTIACGECFYCRRGQSGRCAKGGLFGYAGSPNLDGAQAEYVRVPFADGTLLKLPDGLSDEAALLLGDILPTG  156 (344)
T ss_pred             CCCEEEEcccCCCCCChHHhCcCcccCCCCccccccccCCCCCceeEEEEcccccCceEECCCCCCHHHhhhhcCchHHH
Confidence            999999998899999999999999999887655   223346999999999975  999999999998888664 88999


Q ss_pred             HHHHHHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHH
Q 017916          171 LHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKA  250 (364)
Q Consensus       171 ~~~l~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~  250 (364)
                      |++++..++++|++|||+|+|.+|++++|+|+.+|+..+++++.++++.++++++|+. .+++  ...++...++++.  
T Consensus       157 ~~~~~~~~~~~~~~vlI~g~g~vg~~~~~~a~~~g~~~v~~~~~~~~~~~~~~~~g~~-~~~~--~~~~~~~~l~~~~--  231 (344)
T cd08284         157 YFGAKRAQVRPGDTVAVIGCGPVGLCAVLSAQVLGAARVFAVDPVPERLERAAALGAE-PINF--EDAEPVERVREAT--  231 (344)
T ss_pred             HhhhHhcCCccCCEEEEECCcHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHHHhCCe-EEec--CCcCHHHHHHHHh--
Confidence            9999778889999999998899999999999999975677778888999999999975 3343  3356666666654  


Q ss_pred             cCCCccEEEECCCCHHHHHHHHHhcccCCEEEEEcCCCC-CccccchhhhhcCcEEEeec-cCCCcHHHHHHHHHcCCCC
Q 017916          251 MGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHH-EMTVPLTPAAVREVDVVGVF-RYKNTWPLCLELLRSGKID  328 (364)
Q Consensus       251 ~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~g~~~  328 (364)
                      .++++|++||++|+.......+++++++|+++.+|.... ...........+++++.+.. ...+.++++++++.++.+.
T Consensus       232 ~~~~~dvvid~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  311 (344)
T cd08284         232 EGRGADVVLEAVGGAAALDLAFDLVRPGGVISSVGVHTAEEFPFPGLDAYNKNLTLRFGRCPVRSLFPELLPLLESGRLD  311 (344)
T ss_pred             CCCCCCEEEECCCCHHHHHHHHHhcccCCEEEEECcCCCCCccccHHHHhhcCcEEEEecCCcchhHHHHHHHHHcCCCC
Confidence            256899999999977888999999999999999986542 22233334456777766542 2367899999999999985


Q ss_pred             CCCceEEEeeCChhhHHHHHHHHhcCCCceEEEEe
Q 017916          329 VKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFN  363 (364)
Q Consensus       329 ~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~  363 (364)
                      +.+.+.+.|++  +++++|++.++++.. ||+|++
T Consensus       312 ~~~~~~~~~~~--~~~~~a~~~~~~~~~-~k~Vi~  343 (344)
T cd08284         312 LEFLIDHRMPL--EEAPEAYRLFDKRKV-LKVVLD  343 (344)
T ss_pred             hHHhEeeeecH--HHHHHHHHHHhcCCc-eEEEec
Confidence            44456788888  999999999988877 999986

Glutathione-dependent formaldehyde dehydrogenases (FDHs) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. These tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typical

>KOG0025 consensus Zn2+-binding dehydrogenase (nuclear receptor binding factor-1) [Transcription; Energy production and conversion]

Probab=100.00  E-value=2.6e-41  Score=284.94  Aligned_cols=316  Identities=21%  Similarity=0.288  Sum_probs=253.7

Q ss_pred             ccccchhcceeEEEe----cCCceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEE
Q 017916           10 EKEDGEEVNMAAWLL----GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVI   85 (364)
Q Consensus        10 ~~~~~~~~~~~~~~~----~~~~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V   85 (364)
                      +.+.++...+++++.    ..+.+++++.++|....++|+||..+++|||+|+..++|.|+..  +.+|.+.|+|++|+|
T Consensus        12 sa~q~~~~~kalvY~~hgdP~kVlql~~~~~p~~~~s~v~Vk~LAaPINPsDIN~IQGvYpvr--P~~PAVgGnEGv~eV   89 (354)
T KOG0025|consen   12 SASQMPARSKALVYSEHGDPAKVLQLKNLELPAVPGSDVLVKMLAAPINPSDINQIQGVYPVR--PELPAVGGNEGVGEV   89 (354)
T ss_pred             cccccccccceeeecccCCchhhheeecccCCCCCCCceeeeeeecCCChHHhhhhccccCCC--CCCCcccCCcceEEE
Confidence            445566667788877    23799999999999888889999999999999999999988654  678999999999999


Q ss_pred             EEeCCCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCccchhhhh
Q 017916           86 EKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE  165 (364)
Q Consensus        86 ~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~lP~~~~~~~aa~~~  165 (364)
                      +.+|+++..|++||+|+....                           ..|+|++|.+.+++.++++++.++.+.||++.
T Consensus        90 v~vGs~vkgfk~Gd~VIp~~a---------------------------~lGtW~t~~v~~e~~Li~vd~~~pl~~AAT~~  142 (354)
T KOG0025|consen   90 VAVGSNVKGFKPGDWVIPLSA---------------------------NLGTWRTEAVFSESDLIKVDKDIPLASAATLS  142 (354)
T ss_pred             EEecCCcCccCCCCeEeecCC---------------------------CCccceeeEeecccceEEcCCcCChhhhheec
Confidence            999999999999999997633                           45999999999999999999999999999887


Q ss_pred             -hhHHHHHHHH-HcCCCCCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChh---HHHHHHHcCCCeEEecCCCccc
Q 017916          166 -PLSVGLHACR-RANIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDY---RLSVAKELGADNIVKVSTNLQD  239 (364)
Q Consensus       166 -~~~~a~~~l~-~~~~~~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~---~~~~~~~lg~~~~~~~~~~~~~  239 (364)
                       ..+|||.+|. .-++++||+|+..|| +++|++.+|+|+++|++.+-++...+.   -.+.++.||+++++..+    +
T Consensus       143 VNP~TAyrmL~dfv~L~~GD~vIQNganS~VG~~ViQlaka~GiktinvVRdR~~ieel~~~Lk~lGA~~ViTee----e  218 (354)
T KOG0025|consen  143 VNPCTAYRMLKDFVQLNKGDSVIQNGANSGVGQAVIQLAKALGIKTINVVRDRPNIEELKKQLKSLGATEVITEE----E  218 (354)
T ss_pred             cCchHHHHHHHHHHhcCCCCeeeecCcccHHHHHHHHHHHHhCcceEEEeecCccHHHHHHHHHHcCCceEecHH----H
Confidence             8899999995 488999999999998 999999999999999987666644442   23445679999988522    2


Q ss_pred             HHHHHHHHHHHcCCCccEEEECCCCHHHHHHHHHhcccCCEEEEEc-CCCCCccccchhhhhcCcEEEeeccC-------
Q 017916          240 IAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVG-MGHHEMTVPLTPAAVREVDVVGVFRY-------  311 (364)
Q Consensus       240 ~~~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~-------  311 (364)
                      +.+.-.........++.+.|||+| +....++.+.|..||.++.+| |+..+...+...++++.+.++|++..       
T Consensus       219 l~~~~~~k~~~~~~~prLalNcVG-Gksa~~iar~L~~GgtmvTYGGMSkqPv~~~ts~lIFKdl~~rGfWvt~W~~~~~  297 (354)
T KOG0025|consen  219 LRDRKMKKFKGDNPRPRLALNCVG-GKSATEIARYLERGGTMVTYGGMSKQPVTVPTSLLIFKDLKLRGFWVTRWKKEHK  297 (354)
T ss_pred             hcchhhhhhhccCCCceEEEeccC-chhHHHHHHHHhcCceEEEecCccCCCcccccchheeccceeeeeeeeehhhccC
Confidence            221111111112457899999999 466678999999999999998 78888899999999999999999864       


Q ss_pred             -----CCcHHHHHHHHHcCCCCCCCceEEEeeCChhhHHHHHHHHhcC-CCceEEEEe
Q 017916          312 -----KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARG-GTAIKVMFN  363 (364)
Q Consensus       312 -----~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~-~~~gkvvv~  363 (364)
                           .+.+.++.++++.|++.  .......+|  ++...|++...+. ...||.++.
T Consensus       298 ~pe~~~~~i~~~~~l~~~G~i~--~~~~e~v~L--~~~~tald~~L~~~~~~~Kq~i~  351 (354)
T KOG0025|consen  298 SPEERKEMIDELCDLYRRGKLK--APNCEKVPL--ADHKTALDAALSKFGKSGKQIIV  351 (354)
T ss_pred             CcHHHHHHHHHHHHHHHcCeec--cccceeeec--hhhhHHHHHHHHHhccCCceEEE
Confidence                 23567889999999994  333344567  7777887754333 444566664

>cd08262 Zn_ADH8 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=3.8e-40  Score=304.98  Aligned_cols=329  Identities=30%  Similarity=0.476  Sum_probs=264.4

Q ss_pred             ceeEEEecCCceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhccc--------CCccCCCCcccccceeEEEEEeC
Q 017916           18 NMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRC--------ADFVVKEPMVIGHECAGVIEKVG   89 (364)
Q Consensus        18 ~~~~~~~~~~~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~--------~~~~~~~p~~~G~e~~G~V~~vG   89 (364)
                      |+++++.++ .+++++.+.|++++++|+|||.++++|+.|+....|...        .......|.++|+|++|+|+++|
T Consensus         1 m~a~~~~~~-~~~~~~~~~p~~~~~~v~V~v~~~~~~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG   79 (341)
T cd08262           1 MRAAVFRDG-PLVVRDVPDPEPGPGQVLVKVLACGICGSDLHATAHPEAMVDDAGGPSLMDLGADIVLGHEFCGEVVDYG   79 (341)
T ss_pred             CceEEEeCC-ceEEEecCCCCCCCCeEEEEEEEEEEcccchHHHcCCCcccccccccccccCCCCcccccceeEEEEEeC
Confidence            467777766 899999999999999999999999999999998876321        01122357899999999999999


Q ss_pred             CCCCC-CCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCccchhhhhhhH
Q 017916           90 SEVKT-LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLS  168 (364)
Q Consensus        90 ~~v~~-~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~lP~~~~~~~aa~~~~~~  168 (364)
                      +++++ |++||+|++++..+|..|+.|..+.           .....|+|++|+.++.++++++|+++++++++++..++
T Consensus        80 ~~v~~~~~~Gd~V~~~~~~~~~~~~~~~~~~-----------~~~~~g~~~~~~~v~~~~~~~lP~~~s~~~a~~~~~~~  148 (341)
T cd08262          80 PGTERKLKVGTRVTSLPLLLCGQGASCGIGL-----------SPEAPGGYAEYMLLSEALLLRVPDGLSMEDAALTEPLA  148 (341)
T ss_pred             CCCcCCCCCCCEEEecCCcCCCCChhhhCCC-----------CcCCCCceeeeEEechHHeEECCCCCCHHHhhhhhhHH
Confidence            99987 9999999999999999999993211           11256999999999999999999999988887656888


Q ss_pred             HHHHHHHHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcc--cHHHHHHH
Q 017916          169 VGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQ--DIAEEVEK  246 (364)
Q Consensus       169 ~a~~~l~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~--~~~~~i~~  246 (364)
                      +||+++..+++++|++|||+|+|++|++++|+|+.+|++.++++++++++.++++++|++++++++....  ++. .+..
T Consensus       149 ~a~~~~~~~~~~~g~~VlI~g~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~-~~~~  227 (341)
T cd08262         149 VGLHAVRRARLTPGEVALVIGCGPIGLAVIAALKARGVGPIVASDFSPERRALALAMGADIVVDPAADSPFAAWA-AELA  227 (341)
T ss_pred             HHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHcCCcEEEcCCCcCHHHHHH-HHHH
Confidence            9999887799999999999988999999999999999987888888999999999999988777543211  121 2222


Q ss_pred             HHHHcCCCccEEEECCCCHHHHHHHHHhcccCCEEEEEcCCCCCccccchhhhhcCcEEEeeccC-CCcHHHHHHHHHcC
Q 017916          247 IQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY-KNTWPLCLELLRSG  325 (364)
Q Consensus       247 ~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~g  325 (364)
                      .  ..++++|++||++|+...+..++++++++|+++.+|...............+++++.+.... .+.+.+++++++++
T Consensus       228 ~--~~~~~~d~vid~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g  305 (341)
T cd08262         228 R--AGGPKPAVIFECVGAPGLIQQIIEGAPPGGRIVVVGVCMESDNIEPALAIRKELTLQFSLGYTPEEFADALDALAEG  305 (341)
T ss_pred             H--hCCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEECCCCCCCccCHHHHhhcceEEEEEecccHHHHHHHHHHHHcC
Confidence            2  23567999999999656788899999999999999854322222222224566776655444 45788999999999


Q ss_pred             CCCCCCceEEEeeCChhhHHHHHHHHhcCCCceEEEEe
Q 017916          326 KIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFN  363 (364)
Q Consensus       326 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~  363 (364)
                      .+.+.+.+.+.|++  +++++|++.++++...||+|++
T Consensus       306 ~i~~~~~i~~~~~l--~~~~~a~~~~~~~~~~~kvvv~  341 (341)
T cd08262         306 KVDVAPMVTGTVGL--DGVPDAFEALRDPEHHCKILVD  341 (341)
T ss_pred             CCChHHheEEEeeH--HHHHHHHHHHhcCCCceEEEeC
Confidence            99655566788999  9999999999999999999974

The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i

>cd08265 Zn_ADH3 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=3.8e-40  Score=309.27  Aligned_cols=330  Identities=31%  Similarity=0.535  Sum_probs=269.3

Q ss_pred             CceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccC----CccCCCCcccccceeEEEEEeCCCCCCCCCCCEEE
Q 017916           27 NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCA----DFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVA  102 (364)
Q Consensus        27 ~~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~----~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~  102 (364)
                      ..+++.+.|.|++++++|+|||.++++|+.|+....+.+.+    .....+|.++|+|++|+|+++|++++.|++||+|+
T Consensus        37 ~~~~~~~~~~p~~~~~ev~V~v~a~gi~~~D~~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~  116 (384)
T cd08265          37 PELRVEDVPVPNLKPDEILIRVKACGICGSDIHLYETDKDGYILYPGLTEFPVVIGHEFSGVVEKTGKNVKNFEKGDPVT  116 (384)
T ss_pred             CCEEEEECCCCCCCCCEEEEEEEEEEEcHhHHHHHcCCCCcccccCcccCCCcccccceEEEEEEECCCCCCCCCCCEEE
Confidence            47999999999999999999999999999999887632111    11135688999999999999999999999999999


Q ss_pred             EcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCC-------CCccchhhhhhhHHHHHHH-
Q 017916          103 LEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDN-------VSLEEGAMCEPLSVGLHAC-  174 (364)
Q Consensus       103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~lP~~-------~~~~~aa~~~~~~~a~~~l-  174 (364)
                      +.+..+|..|+.|+.+++++|.++...+. ..+|+|++|+.+++++++++|++       ++...|++..++++||+++ 
T Consensus       117 ~~~~~~~~~~~~c~~~~~~~~~~~~~~g~-~~~g~~~~~v~v~~~~~~~lP~~~~~~~~~~~~~~a~~~~~~~ta~~al~  195 (384)
T cd08265         117 AEEMMWCGMCRACRSGSPNHCKNLKELGF-SADGAFAEYIAVNARYAWEINELREIYSEDKAFEAGALVEPTSVAYNGLF  195 (384)
T ss_pred             ECCCCCCCCChhhhCcCcccCCCcceeee-cCCCcceeeEEechHHeEECCccccccccCCCHHHhhhhhHHHHHHHHHH
Confidence            99999999999999999999998876553 24799999999999999999986       3455555556888999998 


Q ss_pred             HH-cCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCC-cccHHHHHHHHHHHcC
Q 017916          175 RR-ANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTN-LQDIAEEVEKIQKAMG  252 (364)
Q Consensus       175 ~~-~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~-~~~~~~~i~~~~~~~~  252 (364)
                      .. .++++|++|||+|+|.+|++++|+|+.+|++.+++++.+++|.++++++|++.++++.+. ..++.+.++++.  .+
T Consensus       196 ~~~~~~~~g~~VlV~g~g~vG~~ai~lA~~~G~~~vi~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~v~~~~--~g  273 (384)
T cd08265         196 IRGGGFRPGAYVVVYGAGPIGLAAIALAKAAGASKVIAFEISEERRNLAKEMGADYVFNPTKMRDCLSGEKVMEVT--KG  273 (384)
T ss_pred             hhcCCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCCEEEcccccccccHHHHHHHhc--CC
Confidence            34 689999999999779999999999999999778888888889999999999888775432 236666666654  35


Q ss_pred             CCccEEEECCCC-HHHHHHHHHhcccCCEEEEEcCCCCCccccchhhhhcCcEEEeeccC--CCcHHHHHHHHHcCCCCC
Q 017916          253 TGIDVSFDCAGF-NKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY--KNTWPLCLELLRSGKIDV  329 (364)
Q Consensus       253 ~~~d~vid~~g~-~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~g~~~~  329 (364)
                      .++|+++|+.|. ...+..++++|+++|+++.+|.......+....+..+..++.+....  ...+.+++++++++.+.+
T Consensus       274 ~gvDvvld~~g~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ll~~g~l~~  353 (384)
T cd08265         274 WGADIQVEAAGAPPATIPQMEKSIAINGKIVYIGRAATTVPLHLEVLQVRRAQIVGAQGHSGHGIFPSVIKLMASGKIDM  353 (384)
T ss_pred             CCCCEEEECCCCcHHHHHHHHHHHHcCCEEEEECCCCCCCcccHHHHhhCceEEEEeeccCCcchHHHHHHHHHcCCCCh
Confidence            689999999996 34778899999999999999854333333444556667777776543  457999999999999854


Q ss_pred             CCceEEEeeCChhhHHHHHHHHhcCCCceEEEE
Q 017916          330 KPLVTHRFGFSQKEVEEAFETSARGGTAIKVMF  362 (364)
Q Consensus       330 ~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv  362 (364)
                      .+.+.+.|++  +++.+|++.+.++ ..||+++
T Consensus       354 ~~~~~~~~~~--~~~~~a~~~~~~~-~~~kvvv  383 (384)
T cd08265         354 TKIITARFPL--EGIMEAIKAASER-TDGKITI  383 (384)
T ss_pred             HHheEEEeeH--HHHHHHHHHHhcC-CCceEEe
Confidence            3446788999  9999999997665 6788876

This group resembles the zinc-dependent alcohol dehydrogenase and has the catalytic and structural zinc-binding sites characteristic of this group. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanedi

>cd08235 iditol_2_DH_like L-iditol 2-dehydrogenase

Probab=100.00  E-value=6.7e-40  Score=303.59  Aligned_cols=335  Identities=38%  Similarity=0.662  Sum_probs=280.8

Q ss_pred             ceeEEEecCCceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCCCCCCCCC
Q 017916           18 NMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVP   97 (364)
Q Consensus        18 ~~~~~~~~~~~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~   97 (364)
                      |+++++..++.+.+++.+.|++.+++|+|||.++++|+.|+....|.+.   ....|.++|+|++|+|+.+|++++.+++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~l~~~~v~i~v~~~~l~~~d~~~~~g~~~---~~~~~~~~g~~~~G~V~~~G~~v~~~~~   77 (343)
T cd08235           1 MKAAVLHGPNDVRLEEVPVPEPGPGEVLVKVRACGICGTDVKKIRGGHT---DLKPPRILGHEIAGEIVEVGDGVTGFKV   77 (343)
T ss_pred             CeEEEEecCCceEEEEccCCCCCCCeEEEEEEEeeeccccHHHHcCCCc---cCCCCcccccceEEEEEeeCCCCCCCCC
Confidence            4677777778899999999999999999999999999999998876442   1345789999999999999999999999


Q ss_pred             CCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCc-----eEECCCCCCccchhhhhhhHHHHH
Q 017916           98 GDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADL-----CFKLPDNVSLEEGAMCEPLSVGLH  172 (364)
Q Consensus        98 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~-----~~~lP~~~~~~~aa~~~~~~~a~~  172 (364)
                      ||+|++.++.+|.+|..|..++.++|....+++. ...|+|++|+.+++++     ++++|+++++.+|+++..+.+||+
T Consensus        78 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~v~v~~~~~~~~~~~~lP~~~~~~~aa~~~~~~~a~~  156 (343)
T cd08235          78 GDRVFVAPHVPCGECHYCLRGNENMCPNYKKFGN-LYDGGFAEYVRVPAWAVKRGGVLKLPDNVSFEEAALVEPLACCIN  156 (343)
T ss_pred             CCEEEEccCCCCCCChHHHCcCcccCCCcceecc-CCCCcceeeEEecccccccccEEECCCCCCHHHHHhhhHHHHHHH
Confidence            9999999999999999999999999988765543 4579999999999999     999999999999887678889999


Q ss_pred             HHHHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcC
Q 017916          173 ACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMG  252 (364)
Q Consensus       173 ~l~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~  252 (364)
                      +++..++++|++|||+|+|.+|++++|+|+..|++.++++++++++.+.++++|++++++++.  .++.+.++...  .+
T Consensus       157 ~l~~~~~~~g~~VlV~g~g~vg~~~~~la~~~g~~~v~~~~~s~~~~~~~~~~g~~~~~~~~~--~~~~~~i~~~~--~~  232 (343)
T cd08235         157 AQRKAGIKPGDTVLVIGAGPIGLLHAMLAKASGARKVIVSDLNEFRLEFAKKLGADYTIDAAE--EDLVEKVRELT--DG  232 (343)
T ss_pred             HHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCcEEecCCc--cCHHHHHHHHh--CC
Confidence            997778999999999987999999999999999975788888888888888999988776543  56766666553  25


Q ss_pred             CCccEEEECCCCHHHHHHHHHhcccCCEEEEEcCCCCC--ccccchhhhhcCcEEEeeccC-CCcHHHHHHHHHcCCCCC
Q 017916          253 TGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHE--MTVPLTPAAVREVDVVGVFRY-KNTWPLCLELLRSGKIDV  329 (364)
Q Consensus       253 ~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~--~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~g~~~~  329 (364)
                      .++|++|||+++.......+++|+++|+++.++.....  ..........+.+.+.+.... .+.+++++++++++.+.+
T Consensus       233 ~~vd~vld~~~~~~~~~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~l~~  312 (343)
T cd08235         233 RGADVVIVATGSPEAQAQALELVRKGGRILFFGGLPKGSTVNIDPNLIHYREITITGSYAASPEDYKEALELIASGKIDV  312 (343)
T ss_pred             cCCCEEEECCCChHHHHHHHHHhhcCCEEEEEeccCCCCCcccCHHHHhhCceEEEEEecCChhhHHHHHHHHHcCCCCh
Confidence            57999999999777889999999999999998743221  233334566677777766544 567889999999999854


Q ss_pred             CCceEEEeeCChhhHHHHHHHHhcCCCceEEEEe
Q 017916          330 KPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFN  363 (364)
Q Consensus       330 ~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~  363 (364)
                      .+.+...|++  +++.+|++.+.++. .||+|++
T Consensus       313 ~~~~~~~~~~--~~~~~a~~~~~~~~-~~k~vi~  343 (343)
T cd08235         313 KDLITHRFPL--EDIEEAFELAADGK-SLKIVIT  343 (343)
T ss_pred             HHheeeEeeH--HHHHHHHHHHhCCC-cEEEEeC
Confidence            3456778888  99999999999998 9999975

Putative L-iditol 2-dehydrogenase based on annotation of some members in this subgroup. L-iditol 2-dehydrogenase catalyzes the NAD+-dependent conversion of L-iditol to L-sorbose in fructose and mannose metabolism. This enzyme is related to sorbitol dehydrogenase, alcohol dehydrogenase, and other medium chain dehydrogenase/reductases. The zinc-dependent alcohol dehydrogenase (ADH-Zn)-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) to highlight its broad range of activities and to distinguish from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, i

>cd08261 Zn_ADH7 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=1e-39  Score=301.67  Aligned_cols=335  Identities=38%  Similarity=0.643  Sum_probs=277.1

Q ss_pred             ceeEEEecCCceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCCCCCCCCC
Q 017916           18 NMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVP   97 (364)
Q Consensus        18 ~~~~~~~~~~~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~   97 (364)
                      |++++...+..+++.+.+.|++.++||+|+|.++++|+.|+....+.+..   ..+|.++|+|++|+|+.+|++++.|++
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~l~~~d~~~~~~~~~~---~~~~~~~g~e~~G~V~~~G~~v~~~~~   77 (337)
T cd08261           1 MKALVCEKPGRLEVVDIPEPVPGAGEVLVRVKRVGICGSDLHIYHGRNPF---ASYPRILGHELSGEVVEVGEGVAGLKV   77 (337)
T ss_pred             CeEEEEeCCCceEEEECCCCCCCCCeEEEEEEEEeEcccChHHHcCCCCc---CCCCcccccccEEEEEEeCCCCCCCCC
Confidence            46777777788999999999999999999999999999999988765422   245789999999999999999999999


Q ss_pred             CCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCccchhhhhhhHHHHHHHHHc
Q 017916           98 GDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRA  177 (364)
Q Consensus        98 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~lP~~~~~~~aa~~~~~~~a~~~l~~~  177 (364)
                      ||+|++.+..+|..|..|...++++|.+....+ ....|+|++|+.++++ ++++|+++++++|+++..+.+++++++..
T Consensus        78 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~v~v~~~-~~~~p~~~~~~~aa~~~~~~~a~~~~~~~  155 (337)
T cd08261          78 GDRVVVDPYISCGECYACRKGRPNCCENLQVLG-VHRDGGFAEYIVVPAD-ALLVPEGLSLDQAALVEPLAIGAHAVRRA  155 (337)
T ss_pred             CCEEEECCCCCCCCChhhhCcCcccCCCCCeee-ecCCCcceeEEEechh-eEECCCCCCHHHhhhhchHHHHHHHHHhc
Confidence            999999888899999999999999996443322 2246999999999999 99999999999988777778888888778


Q ss_pred             CCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcCCCccE
Q 017916          178 NIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDV  257 (364)
Q Consensus       178 ~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~  257 (364)
                      ++++|++|||+|+|.+|++++|+|+.+|++ ++++++++++.++++++|+++++++..  .++.+.++.+.  .+.++|+
T Consensus       156 ~l~~g~~vLI~g~g~vG~~a~~lA~~~g~~-v~~~~~s~~~~~~~~~~g~~~v~~~~~--~~~~~~l~~~~--~~~~vd~  230 (337)
T cd08261         156 GVTAGDTVLVVGAGPIGLGVIQVAKARGAR-VIVVDIDDERLEFARELGADDTINVGD--EDVAARLRELT--DGEGADV  230 (337)
T ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHcCCe-EEEECCCHHHHHHHHHhCCCEEecCcc--cCHHHHHHHHh--CCCCCCE
Confidence            899999999998799999999999999995 677777889999999999988887654  45666666553  2457999


Q ss_pred             EEECCCCHHHHHHHHHhcccCCEEEEEcCCCCCccccchhhhhcCcEEEeeccC-CCcHHHHHHHHHcCCCCCCCceEEE
Q 017916          258 SFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY-KNTWPLCLELLRSGKIDVKPLVTHR  336 (364)
Q Consensus       258 vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~g~~~~~~~~~~~  336 (364)
                      +|||+|+.+.+..++++|+++|+++.++............+..+.+++.+.... .+.+++++++++++.+.+.+.+...
T Consensus       231 vld~~g~~~~~~~~~~~l~~~G~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~i~~~~~~~~~  310 (337)
T cd08261         231 VIDATGNPASMEEAVELVAHGGRVVLVGLSKGPVTFPDPEFHKKELTILGSRNATREDFPDVIDLLESGKVDPEALITHR  310 (337)
T ss_pred             EEECCCCHHHHHHHHHHHhcCCEEEEEcCCCCCCccCHHHHHhCCCEEEEeccCChhhHHHHHHHHHcCCCChhhheEEE
Confidence            999998778889999999999999999854433333334455567777665333 5578899999999998542257788


Q ss_pred             eeCChhhHHHHHHHHhcC-CCceEEEEeC
Q 017916          337 FGFSQKEVEEAFETSARG-GTAIKVMFNL  364 (364)
Q Consensus       337 ~~~~~~~~~~a~~~~~~~-~~~gkvvv~~  364 (364)
                      |++  +++.+|++.+.++ ...+|+|+++
T Consensus       311 ~~~--~~~~~a~~~~~~~~~~~~k~v~~~  337 (337)
T cd08261         311 FPF--EDVPEAFDLWEAPPGGVIKVLIEF  337 (337)
T ss_pred             eeH--HHHHHHHHHHhcCCCceEEEEEeC
Confidence            888  9999999999988 5889999875

This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase,

>cd08242 MDR_like Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=5e-40  Score=301.43  Aligned_cols=318  Identities=31%  Similarity=0.484  Sum_probs=268.0

Q ss_pred             ceeEEEecCCceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCCCCCCCCC
Q 017916           18 NMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVP   97 (364)
Q Consensus        18 ~~~~~~~~~~~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~   97 (364)
                      |+++++.++..+++++.+.|++.++||+|||.++++|+.|+....|.+      ..|.++|+|++|+|+++|++   +++
T Consensus         1 ~~a~~~~~~~~~~~~~~~~p~~~~~~vlV~v~a~~i~~~d~~~~~g~~------~~~~~~G~e~~G~Vv~~G~~---~~~   71 (319)
T cd08242           1 MKALVLDGGLDLRVEDLPKPEPPPGEALVRVLLAGICNTDLEIYKGYY------PFPGVPGHEFVGIVEEGPEA---ELV   71 (319)
T ss_pred             CeeEEEeCCCcEEEEECCCCCCCCCeEEEEEEEEEEccccHHHHcCCC------CCCCccCceEEEEEEEeCCC---CCC
Confidence            467778877889999999999999999999999999999999887643      25789999999999999988   789


Q ss_pred             CCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCccchhhhhhhHHHHHHHHHc
Q 017916           98 GDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRA  177 (364)
Q Consensus        98 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~lP~~~~~~~aa~~~~~~~a~~~l~~~  177 (364)
                      ||+|...+..+|.+|.+|+.+..++|.+....+....+|+|++|+.++.++++++|++++.++++.+.++++++.+++..
T Consensus        72 G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lP~~~~~~~aa~~~~~~~~~~~~~~~  151 (319)
T cd08242          72 GKRVVGEINIACGRCEYCRRGLYTHCPNRTVLGIVDRDGAFAEYLTLPLENLHVVPDLVPDEQAVFAEPLAAALEILEQV  151 (319)
T ss_pred             CCeEEECCCcCCCCChhhhCcCcccCCCCcccCccCCCCceEEEEEechHHeEECcCCCCHHHhhhhhHHHHHHHHHHhc
Confidence            99999988888999999999999999887655543457999999999999999999999988887655566777777888


Q ss_pred             CCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcCCCccE
Q 017916          178 NIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDV  257 (364)
Q Consensus       178 ~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~  257 (364)
                      +++++++|||+|+|.+|++++|+|+.+|++ +++++.++++.++++++|++.++++...             ..+.++|+
T Consensus       152 ~~~~g~~vlV~g~g~vg~~~~q~a~~~G~~-vi~~~~~~~~~~~~~~~g~~~~~~~~~~-------------~~~~~~d~  217 (319)
T cd08242         152 PITPGDKVAVLGDGKLGLLIAQVLALTGPD-VVLVGRHSEKLALARRLGVETVLPDEAE-------------SEGGGFDV  217 (319)
T ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHcCCe-EEEEcCCHHHHHHHHHcCCcEEeCcccc-------------ccCCCCCE
Confidence            999999999998899999999999999996 7777788999999999999877664221             12568999


Q ss_pred             EEECCCCHHHHHHHHHhcccCCEEEEEcCCCCCccccchhhhhcCcEEEeeccCCCcHHHHHHHHHcCCCCCCCceEEEe
Q 017916          258 SFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRF  337 (364)
Q Consensus       258 vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~  337 (364)
                      +|||+|+...+...+++|+++|+++..+.......+....+..++.++.+....  .+++++++++++++++.+.+.+.|
T Consensus       218 vid~~g~~~~~~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~i~~~~~~--~~~~~~~~~~~~~l~~~~~~~~~~  295 (319)
T cd08242         218 VVEATGSPSGLELALRLVRPRGTVVLKSTYAGPASFDLTKAVVNEITLVGSRCG--PFAPALRLLRKGLVDVDPLITAVY  295 (319)
T ss_pred             EEECCCChHHHHHHHHHhhcCCEEEEEcccCCCCccCHHHheecceEEEEEecc--cHHHHHHHHHcCCCChhhceEEEE
Confidence            999999777889999999999999987643333344445566788888776543  388999999999986556688999


Q ss_pred             eCChhhHHHHHHHHhcCCCceEEEEe
Q 017916          338 GFSQKEVEEAFETSARGGTAIKVMFN  363 (364)
Q Consensus       338 ~~~~~~~~~a~~~~~~~~~~gkvvv~  363 (364)
                      ++  +++++||+.++++. .+|++++
T Consensus       296 ~l--~~~~~a~~~~~~~~-~~k~vi~  318 (319)
T cd08242         296 PL--EEALEAFERAAEPG-ALKVLLR  318 (319)
T ss_pred             eH--HHHHHHHHHHhcCC-ceEEEeC
Confidence            99  99999999998775 5899986

This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family, including threonine dehydrogenase. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reducta

>cd08278 benzyl_alcohol_DH Benzyl alcohol dehydrogenase

Probab=100.00  E-value=5.4e-40  Score=306.34  Aligned_cols=333  Identities=30%  Similarity=0.451  Sum_probs=272.8

Q ss_pred             cceeEEEecC-CceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCCCCCCC
Q 017916           17 VNMAAWLLGV-NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTL   95 (364)
Q Consensus        17 ~~~~~~~~~~-~~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~   95 (364)
                      .|+|+++.++ ..+++++.+.|.+.++||+|||.++++|+.|+....|.+.    ...|.++|+|++|+|+++|+++.++
T Consensus         2 ~~~a~~~~~~~~~~~~~~~~~p~~~~~~v~Vkv~a~gi~~~d~~~~~g~~~----~~~p~v~G~e~~G~V~~vG~~v~~~   77 (365)
T cd08278           2 KTTAAVVREPGGPFVLEDVELDDPRPDEVLVRIVATGICHTDLVVRDGGLP----TPLPAVLGHEGAGVVEAVGSAVTGL   77 (365)
T ss_pred             ccEEeeeccCCCcceEEEeecCCCCCCeEEEEEEEeecCcccHHHhcCCCC----CCCCcccccceeEEEEEeCCCcccC
Confidence            4678888863 6789999999999999999999999999999998877542    3468899999999999999999999


Q ss_pred             CCCCEEEEcCCcCCCCCccccCCCCCCCCCcccccc----------------------CCCCCcceeEEEecCCceEECC
Q 017916           96 VPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFAT----------------------PPVHGSLANQVVHPADLCFKLP  153 (364)
Q Consensus        96 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------~~~~g~~~~~v~~~~~~~~~lP  153 (364)
                      ++||+|++.+. .|..|.+|..++.++|.+......                      ....|+|++|+.+++++++++|
T Consensus        78 ~~Gd~V~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~y~~v~~~~~~~iP  156 (365)
T cd08278          78 KPGDHVVLSFA-SCGECANCLSGHPAYCENFFPLNFSGRRPDGSTPLSLDDGTPVHGHFFGQSSFATYAVVHERNVVKVD  156 (365)
T ss_pred             CCCCEEEEccc-CCCCChHHhCCCcccccCcccccccccccCCcccccccCCcccccccccccceeeEEEecchhEEECC
Confidence            99999998764 799999999999999986542210                      0125899999999999999999


Q ss_pred             CCCCccchhhhh-hhHHHHHHH-HHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEE
Q 017916          154 DNVSLEEGAMCE-PLSVGLHAC-RRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIV  231 (364)
Q Consensus       154 ~~~~~~~aa~~~-~~~~a~~~l-~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~  231 (364)
                      +++++..++.+. .+.+|+.++ +...++++++|||+|+|++|++++|+|+++|++.+++++.+++|.++++++|++.++
T Consensus       157 ~~~s~~~a~~l~~~~~ta~~~~~~~~~~~~g~~vlI~g~g~vG~~~~~la~~~G~~~v~~~~~~~~k~~~~~~~g~~~~i  236 (365)
T cd08278         157 KDVPLELLAPLGCGIQTGAGAVLNVLKPRPGSSIAVFGAGAVGLAAVMAAKIAGCTTIIAVDIVDSRLELAKELGATHVI  236 (365)
T ss_pred             CCCCHHHhhhhcchhhhhhHHHhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCcEEe
Confidence            999988887665 788899887 568899999999998899999999999999998789998999999999999998887


Q ss_pred             ecCCCcccHHHHHHHHHHHcCCCccEEEECCCCHHHHHHHHHhcccCCEEEEEcCCC--CCccccchhhhhcCcEEEeec
Q 017916          232 KVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGH--HEMTVPLTPAAVREVDVVGVF  309 (364)
Q Consensus       232 ~~~~~~~~~~~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~--~~~~~~~~~~~~~~~~~~~~~  309 (364)
                      +++.  .++.+.+++..   +.++|+++||+|++..+..++++++++|+++.+|...  ....++...+..+++++.+..
T Consensus       237 ~~~~--~~~~~~v~~~~---~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  311 (365)
T cd08278         237 NPKE--EDLVAAIREIT---GGGVDYALDTTGVPAVIEQAVDALAPRGTLALVGAPPPGAEVTLDVNDLLVSGKTIRGVI  311 (365)
T ss_pred             cCCC--cCHHHHHHHHh---CCCCcEEEECCCCcHHHHHHHHHhccCCEEEEeCcCCCCCccccCHHHHhhcCceEEEee
Confidence            7533  46666666553   5689999999997788899999999999999998542  223344444556788887764


Q ss_pred             cC----CCcHHHHHHHHHcCCCCCCCceEEEeeCChhhHHHHHHHHhcCCCceEEEEe
Q 017916          310 RY----KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFN  363 (364)
Q Consensus       310 ~~----~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~  363 (364)
                      ..    .+.+++++++++++.+.+. .+...|++  +++++|++.++++.. -|++++
T Consensus       312 ~~~~~~~~~~~~~~~~l~~g~l~~~-~~~~~~~l--~~~~~a~~~~~~~~~-~k~~~~  365 (365)
T cd08278         312 EGDSVPQEFIPRLIELYRQGKFPFD-KLVTFYPF--EDINQAIADSESGKV-IKPVLR  365 (365)
T ss_pred             cCCcChHHHHHHHHHHHHcCCCChH-HheEEecH--HHHHHHHHHHHCCCc-eEEEEC
Confidence            32    3467889999999998432 23457888  999999999988754 487764

Benzyl alcohol dehydrogenase is similar to liver alcohol dehydrogenase, but has some amino acid substitutions near the active site, which may determine the enzyme's specificity of oxidizing aromatic substrates. Also known as aryl-alcohol dehydrogenases, they catalyze the conversion of an aromatic alcohol + NAD+ to an aromatic aldehyde + NADH + H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononu

>cd08240 6_hydroxyhexanoate_dh_like 6-hydroxyhexanoate dehydrogenase

Probab=100.00  E-value=5.2e-40  Score=305.10  Aligned_cols=337  Identities=28%  Similarity=0.418  Sum_probs=277.6

Q ss_pred             ceeEEEecC-CceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccC---------CccCCCCcccccceeEEEEE
Q 017916           18 NMAAWLLGV-NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCA---------DFVVKEPMVIGHECAGVIEK   87 (364)
Q Consensus        18 ~~~~~~~~~-~~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~---------~~~~~~p~~~G~e~~G~V~~   87 (364)
                      |+++++..+ ..+++.+.|.|++.++||+||+.++++|+.|+....|.+..         .....+|.++|+|++|+|++
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~p~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~   80 (350)
T cd08240           1 MKAAAVVEPGKPLEEVEIDTPKPPGTEVLVKVTACGVCHSDLHIWDGGYDLGGGKTMSLDDRGVKLPLVLGHEIVGEVVA   80 (350)
T ss_pred             CeeEEeccCCCCceEEecCCCCCCCCeEEEEEEEEecCchhHHHHcCCCCccccccccccccCCCCCcccccceeEEEEe
Confidence            467766643 45889999999999999999999999999999988764310         00124568899999999999


Q ss_pred             eCCCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCccchhhhh-h
Q 017916           88 VGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-P  166 (364)
Q Consensus        88 vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~lP~~~~~~~aa~~~-~  166 (364)
                      +|++++++++||+|++.+...|.+|.+|++++.++|......+. ...|+|++|+.++.++++++|+++++.+++.+. .
T Consensus        81 vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~p~~~s~~~aa~l~~~  159 (350)
T cd08240          81 VGPDAADVKVGDKVLVYPWIGCGECPVCLAGDENLCAKGRALGI-FQDGGYAEYVIVPHSRYLVDPGGLDPALAATLACS  159 (350)
T ss_pred             eCCCCCCCCCCCEEEECCcCCCCCChHHHCcCcccCCCCCceee-eccCcceeeEEecHHHeeeCCCCCCHHHeehhhch
Confidence            99999999999999999999999999999999999988755543 367999999999999999999999999888664 7


Q ss_pred             hHHHHHHHHH-cCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHH
Q 017916          167 LSVGLHACRR-ANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVE  245 (364)
Q Consensus       167 ~~~a~~~l~~-~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~  245 (364)
                      +.+||++++. ..++++++|||+|+|.+|++++|+|+++|++.+++++.++++.+.++++|++.+++..  ..++.+.+.
T Consensus       160 ~~tA~~~~~~~~~~~~~~~vlI~g~g~vg~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~--~~~~~~~~~  237 (350)
T cd08240         160 GLTAYSAVKKLMPLVADEPVVIIGAGGLGLMALALLKALGPANIIVVDIDEAKLEAAKAAGADVVVNGS--DPDAAKRII  237 (350)
T ss_pred             hhhHHHHHHhcccCCCCCEEEEECCcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHhCCcEEecCC--CccHHHHHH
Confidence            8899999865 5556899999998899999999999999997788888899999999999998766643  345555555


Q ss_pred             HHHHHcCCCccEEEECCCCHHHHHHHHHhcccCCEEEEEcCCCCCccccchhhhhcCcEEEeeccC-CCcHHHHHHHHHc
Q 017916          246 KIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY-KNTWPLCLELLRS  324 (364)
Q Consensus       246 ~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~  324 (364)
                      +..   ++++|++||++|+...+..++++|+++|+++.+|...............+++++.+.... .+.+.++++++++
T Consensus       238 ~~~---~~~~d~vid~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ll~~  314 (350)
T cd08240         238 KAA---GGGVDAVIDFVNNSATASLAFDILAKGGKLVLVGLFGGEATLPLPLLPLRALTIQGSYVGSLEELRELVALAKA  314 (350)
T ss_pred             HHh---CCCCcEEEECCCCHHHHHHHHHHhhcCCeEEEECCCCCCCcccHHHHhhcCcEEEEcccCCHHHHHHHHHHHHc
Confidence            543   337999999999778899999999999999999854433333444455688888887655 4678899999999


Q ss_pred             CCCCCCCceEEEeeCChhhHHHHHHHHhcCCCceEEEEeC
Q 017916          325 GKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  364 (364)
Q Consensus       325 g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  364 (364)
                      +.+.  +.....|++  +++++|++.+.++...||++++.
T Consensus       315 ~~i~--~~~~~~~~~--~~~~~a~~~~~~~~~~gkvvv~~  350 (350)
T cd08240         315 GKLK--PIPLTERPL--SDVNDALDDLKAGKVVGRAVLKP  350 (350)
T ss_pred             CCCc--cceeeEEcH--HHHHHHHHHHHcCCccceEEecC
Confidence            9984  446678888  99999999999998899999863

6-hydroxyhexanoate dehydrogenase, an enzyme of the zinc-dependent alcohol dehydrogenase-like family of medium chain dehydrogenases/reductases catalyzes the conversion of 6-hydroxyhexanoate and NAD(+) to 6-oxohexanoate + NADH and H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzy

>cd08279 Zn_ADH_class_III Class III alcohol dehydrogenase

Probab=100.00  E-value=6e-40  Score=305.99  Aligned_cols=334  Identities=34%  Similarity=0.538  Sum_probs=273.7

Q ss_pred             ceeEEEecC-CceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCCCCCCCC
Q 017916           18 NMAAWLLGV-NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLV   96 (364)
Q Consensus        18 ~~~~~~~~~-~~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~   96 (364)
                      |+++++..+ ..+++.+.+.|++.+++|+|||.++++|+.|+....|.+.    ..+|.++|+|++|+|+++|++++.|+
T Consensus         1 m~a~~~~~~~~~~~~~~~~~p~~~~~~v~i~v~~~~i~~~d~~~~~g~~~----~~~~~~~g~e~~G~V~~vG~~v~~~~   76 (363)
T cd08279           1 MRAAVLHEVGKPLEIEEVELDDPGPGEVLVRIAAAGLCHSDLHVVTGDLP----APLPAVLGHEGAGVVEEVGPGVTGVK   76 (363)
T ss_pred             CeEEEEecCCCCceEEEeeCCCCCCCeEEEEEEEeecCcHHHHHhcCCCC----CCCCccccccceEEEEEeCCCccccC
Confidence            578888765 6789999999999999999999999999999998876442    35678999999999999999999999


Q ss_pred             CCCEEEEcCCcCCCCCccccCCCCCCCCCcccc------cc-------------CCCCCcceeEEEecCCceEECCCCCC
Q 017916           97 PGDRVALEPGISCWRCDHCKGGRYNLCPEMKFF------AT-------------PPVHGSLANQVVHPADLCFKLPDNVS  157 (364)
Q Consensus        97 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~-------------~~~~g~~~~~v~~~~~~~~~lP~~~~  157 (364)
                      +||+|++.+..+|.+|.+|++++.++|.+..+.      ++             ....|+|++|+.+++++++++|++++
T Consensus        77 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~  156 (363)
T cd08279          77 PGDHVVLSWIPACGTCRYCSRGQPNLCDLGAGILGGQLPDGTRRFTADGEPVGAMCGLGTFAEYTVVPEASVVKIDDDIP  156 (363)
T ss_pred             CCCEEEECCCCCCCCChhhcCCCcccCcccccccccccCCCcccccccCccccccccCccceeeEEeccccEEECCCCCC
Confidence            999999999999999999999999999876421      00             02469999999999999999999999


Q ss_pred             ccchhhhh-hhHHHHHHH-HHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCC
Q 017916          158 LEEGAMCE-PLSVGLHAC-RRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVST  235 (364)
Q Consensus       158 ~~~aa~~~-~~~~a~~~l-~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~  235 (364)
                      +++++.+. .+.+||.++ +..+++++++|||+|+|.+|++++++|+.+|+++++++++++++.++++++|+++++++. 
T Consensus       157 ~~~aa~~~~~~~ta~~~~~~~~~~~~g~~vLI~g~g~vG~a~i~lak~~G~~~Vi~~~~~~~~~~~~~~~g~~~vv~~~-  235 (363)
T cd08279         157 LDRAALLGCGVTTGVGAVVNTARVRPGDTVAVIGCGGVGLNAIQGARIAGASRIIAVDPVPEKLELARRFGATHTVNAS-  235 (363)
T ss_pred             hHHeehhcchhHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHHHHhCCeEEeCCC-
Confidence            98888776 778899887 568899999999997799999999999999997688888899999999999998777643 


Q ss_pred             CcccHHHHHHHHHHHcCCCccEEEECCCCHHHHHHHHHhcccCCEEEEEcCCCC--CccccchhhhhcCcEEEeec----
Q 017916          236 NLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHH--EMTVPLTPAAVREVDVVGVF----  309 (364)
Q Consensus       236 ~~~~~~~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~--~~~~~~~~~~~~~~~~~~~~----  309 (364)
                       ..++...++.+..  +.++|++||++++...+...+++|+++|+++.++....  ...+....+..+...+.+..    
T Consensus       236 -~~~~~~~l~~~~~--~~~vd~vld~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  312 (363)
T cd08279         236 -EDDAVEAVRDLTD--GRGADYAFEAVGRAATIRQALAMTRKGGTAVVVGMGPPGETVSLPALELFLSEKRLQGSLYGSA  312 (363)
T ss_pred             -CccHHHHHHHHcC--CCCCCEEEEcCCChHHHHHHHHHhhcCCeEEEEecCCCCcccccCHHHHhhcCcEEEEEEecCc
Confidence             3466666665532  46799999999977888999999999999999975432  22334444444566555542    


Q ss_pred             cCCCcHHHHHHHHHcCCCCCCCceEEEeeCChhhHHHHHHHHhcCCCceEEE
Q 017916          310 RYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVM  361 (364)
Q Consensus       310 ~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvv  361 (364)
                      .....+++++++++++.+.+.+.+.+.|++  +++++|++.+++++..+.++
T Consensus       313 ~~~~~~~~~~~l~~~g~l~~~~~~~~~~~~--~~~~~a~~~~~~~~~~~~~~  362 (363)
T cd08279         313 NPRRDIPRLLDLYRAGRLKLDELVTRRYSL--DEINEAFADMLAGENARGVI  362 (363)
T ss_pred             CcHHHHHHHHHHHHcCCCCcceeEEEEEcH--HHHHHHHHHHhcCCceeEEe
Confidence            225678899999999998544457788888  99999999999887765555

Glutathione-dependent formaldehyde dehydrogenases (FDHs, Class III ADH) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also known as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to corresponding carboxylic acid and alcohol. ADH is a me

>cd08234 threonine_DH_like L-threonine dehydrogenase

Probab=100.00  E-value=2.9e-39  Score=298.20  Aligned_cols=331  Identities=37%  Similarity=0.616  Sum_probs=277.5

Q ss_pred             ceeEEEecCCceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCCCCCCCCC
Q 017916           18 NMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVP   97 (364)
Q Consensus        18 ~~~~~~~~~~~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~   97 (364)
                      |+++++.+++.+++.+.+.|++.+++|+|||.++++|+.|+....|.+.    ..+|.++|+|++|+|+.+|++++.+++
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~l~~~~v~v~v~~~~l~~~d~~~~~g~~~----~~~p~~~g~~~~G~v~~vG~~v~~~~~   76 (334)
T cd08234           1 MKALVYEGPGELEVEEVPVPEPGPDEVLIKVAACGICGTDLHIYEGEFG----AAPPLVPGHEFAGVVVAVGSKVTGFKV   76 (334)
T ss_pred             CeeEEecCCCceEEEeccCCCCCCCeEEEEEEEEeEchhhhHHhcCCCC----CCCCcccccceEEEEEEeCCCCCCCCC
Confidence            5678888888999999999999999999999999999999998877543    236889999999999999999999999


Q ss_pred             CCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCccchhhhhhhHHHHHHHHHc
Q 017916           98 GDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRA  177 (364)
Q Consensus        98 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~lP~~~~~~~aa~~~~~~~a~~~l~~~  177 (364)
                      ||+|++.+...|+.|.+|..++.++|++....+. ...|+|++|+.++.++++++|+++++.+|+.+..+.+++++++.+
T Consensus        77 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~v~~~~~~~lP~~~~~~~aa~~~~~~~a~~~l~~~  155 (334)
T cd08234          77 GDRVAVDPNIYCGECFYCRRGRPNLCENLTAVGV-TRNGGFAEYVVVPAKQVYKIPDNLSFEEAALAEPLSCAVHGLDLL  155 (334)
T ss_pred             CCEEEEcCCcCCCCCccccCcChhhCCCcceecc-CCCCcceeEEEecHHHcEECcCCCCHHHHhhhhHHHHHHHHHHhc
Confidence            9999999888899999999999999998875432 356999999999999999999999998888667778889888778


Q ss_pred             CCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcCCCccE
Q 017916          178 NIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDV  257 (364)
Q Consensus       178 ~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~  257 (364)
                      ++++|++|||+|+|.+|++++++|++.|+++++++++++++.+.++++|++.+++++.  .++...    ....++++|+
T Consensus       156 ~~~~g~~vlI~g~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~~----~~~~~~~vd~  229 (334)
T cd08234         156 GIKPGDSVLVFGAGPIGLLLAQLLKLNGASRVTVAEPNEEKLELAKKLGATETVDPSR--EDPEAQ----KEDNPYGFDV  229 (334)
T ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCeEEecCCC--CCHHHH----HHhcCCCCcE
Confidence            9999999999988999999999999999976788888999999999999887766543  333333    1223568999


Q ss_pred             EEECCCCHHHHHHHHHhcccCCEEEEEcCCCC--CccccchhhhhcCcEEEeeccCCCcHHHHHHHHHcCCCCCCCceEE
Q 017916          258 SFDCAGFNKTMSTALSATRAGGKVCLVGMGHH--EMTVPLTPAAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTH  335 (364)
Q Consensus       258 vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~~  335 (364)
                      +|||+|+.......+++|+++|+++.+|....  ........+..+++++.+.......+++++++++++++.+.+.+.+
T Consensus       230 v~~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  309 (334)
T cd08234         230 VIEATGVPKTLEQAIEYARRGGTVLVFGVYAPDARVSISPFEIFQKELTIIGSFINPYTFPRAIALLESGKIDVKGLVSH  309 (334)
T ss_pred             EEECCCChHHHHHHHHHHhcCCEEEEEecCCCCCCcccCHHHHHhCCcEEEEeccCHHHHHHHHHHHHcCCCChhhhEEE
Confidence            99999877888999999999999999985432  1222222334477888887666677899999999999865455678


Q ss_pred             EeeCChhhHHHHHHHHhcCCCceEEEE
Q 017916          336 RFGFSQKEVEEAFETSARGGTAIKVMF  362 (364)
Q Consensus       336 ~~~~~~~~~~~a~~~~~~~~~~gkvvv  362 (364)
                      .|++  +++.+|++.+.+ ...||+++
T Consensus       310 ~~~~--~~~~~a~~~~~~-~~~~k~vi  333 (334)
T cd08234         310 RLPL--EEVPEALEGMRS-GGALKVVV  333 (334)
T ss_pred             EecH--HHHHHHHHHHhc-CCceEEEe
Confidence            8888  999999999998 78899986

L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine, via NAD(H)-dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.

>cd08287 FDH_like_ADH3 formaldehyde dehydrogenase (FDH)-like

Probab=100.00  E-value=2.5e-39  Score=299.96  Aligned_cols=334  Identities=28%  Similarity=0.491  Sum_probs=274.7

Q ss_pred             ceeEEEecCCceEEEEecCCCC-CCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCCCCCCCC
Q 017916           18 NMAAWLLGVNTLKIQPFELPSL-GPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLV   96 (364)
Q Consensus        18 ~~~~~~~~~~~~~~~~~~~p~~-~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~   96 (364)
                      |+++++.+++.+++.+.|.|.+ +++||+||+.++++|+.|+....|.+.    ...|.++|+|++|+|+++|+++..++
T Consensus         1 m~~~~~~~~~~~~~~~~~~p~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~----~~~~~~~g~e~~G~V~~vG~~v~~~~   76 (345)
T cd08287           1 MRATVIHGPGDIRVEEVPDPVIEEPTDAVIRVVATCVCGSDLWPYRGVSP----TRAPAPIGHEFVGVVEEVGSEVTSVK   76 (345)
T ss_pred             CceeEEecCCceeEEeCCCCCCCCCCeEEEEEeeeeecccchhhhcCCCC----CCCCcccccceEEEEEEeCCCCCccC
Confidence            5788888888999999999985 899999999999999999988876542    24578999999999999999999999


Q ss_pred             CCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCC--ceEECCCCCCccchhhh------hhhH
Q 017916           97 PGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPAD--LCFKLPDNVSLEEGAMC------EPLS  168 (364)
Q Consensus        97 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~--~~~~lP~~~~~~~aa~~------~~~~  168 (364)
                      +||+|++....+|..|.+|..++.+.|.+..+.+ ...+|+|++|+.++.+  +++++|+++++..+.+.      ..+.
T Consensus        77 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~v~~~~~~~~~lP~~l~~~~~~~~~~~~l~~~~~  155 (345)
T cd08287          77 PGDFVIAPFAISDGTCPFCRAGFTTSCVHGGFWG-AFVDGGQGEYVRVPLADGTLVKVPGSPSDDEDLLPSLLALSDVMG  155 (345)
T ss_pred             CCCEEEeccccCCCCChhhhCcCcccCCCCCccc-CCCCCceEEEEEcchhhCceEECCCCCChhhhhhhhhHhhhcHHH
Confidence            9999998666779999999999999998765444 3577999999999975  99999999987222211      3677


Q ss_pred             HHHHHHHHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHH
Q 017916          169 VGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQ  248 (364)
Q Consensus       169 ~a~~~l~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~  248 (364)
                      +|+++++.+++++|++|+|+|+|++|++++|+|++.|++.++++++++++.++++++|++.++++..  .++.+.+.+..
T Consensus       156 ~a~~~~~~~~~~~g~~vlI~g~g~vg~~~~~lak~~G~~~v~~~~~~~~~~~~~~~~ga~~v~~~~~--~~~~~~i~~~~  233 (345)
T cd08287         156 TGHHAAVSAGVRPGSTVVVVGDGAVGLCAVLAAKRLGAERIIAMSRHEDRQALAREFGATDIVAERG--EEAVARVRELT  233 (345)
T ss_pred             HHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCceEecCCc--ccHHHHHHHhc
Confidence            8999887788999999999888999999999999999987888888888999999999988887543  45556665543


Q ss_pred             HHcCCCccEEEECCCCHHHHHHHHHhcccCCEEEEEcCCCCCccccchhhhhcCcEEEeeccC-CCcHHHHHHHHHcCCC
Q 017916          249 KAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY-KNTWPLCLELLRSGKI  327 (364)
Q Consensus       249 ~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~g~~  327 (364)
                        .+.++|+++|++|++..+..++++++++|+++.++.......++......+++++.+.... .+.++++++++.++.+
T Consensus       234 --~~~~~d~il~~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  311 (345)
T cd08287         234 --GGVGADAVLECVGTQESMEQAIAIARPGGRVGYVGVPHGGVELDVRELFFRNVGLAGGPAPVRRYLPELLDDVLAGRI  311 (345)
T ss_pred             --CCCCCCEEEECCCCHHHHHHHHHhhccCCEEEEecccCCCCccCHHHHHhcceEEEEecCCcHHHHHHHHHHHHcCCC
Confidence              2467999999999888899999999999999999855433333433456788888775443 5678999999999998


Q ss_pred             CCCCceEEEeeCChhhHHHHHHHHhcCCCceEEEEe
Q 017916          328 DVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFN  363 (364)
Q Consensus       328 ~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~  363 (364)
                      .+.+.+.+.|++  +++++|++.+.+... .|++|+
T Consensus       312 ~~~~~~~~~~~l--~~~~~a~~~~~~~~~-~k~~~~  344 (345)
T cd08287         312 NPGRVFDLTLPL--DEVAEGYRAMDERRA-IKVLLR  344 (345)
T ss_pred             CHHHhEEeeecH--HHHHHHHHHHhCCCc-eEEEeC
Confidence            544456788888  999999999887654 499885

This group contains proteins identified as alcohol dehydrogenases and glutathione-dependant formaldehyde dehydrogenases (FDH) of the zinc-dependent/medium chain alcohol dehydrogenase family. The MDR family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>cd08236 sugar_DH NAD(P)-dependent sugar dehydrogenases

Probab=100.00  E-value=3e-39  Score=299.23  Aligned_cols=333  Identities=39%  Similarity=0.662  Sum_probs=275.4

Q ss_pred             ceeEEEecCCceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCCCCCCCCC
Q 017916           18 NMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVP   97 (364)
Q Consensus        18 ~~~~~~~~~~~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~   97 (364)
                      |+|+++.....+.+++.+.|++.++||+||+.++++|+.|+....+.+    ....|.++|+|++|+|+.+|++++.|++
T Consensus         1 ~~a~~~~~~~~l~~~~~~~~~l~~~~v~v~v~~~~~n~~d~~~~~~~~----~~~~~~~~g~~~~G~V~~~g~~v~~~~~   76 (343)
T cd08236           1 MKALVLTGPGDLRYEDIPKPEPGPGEVLVKVKACGICGSDIPRYLGTG----AYHPPLVLGHEFSGTVEEVGSGVDDLAV   76 (343)
T ss_pred             CeeEEEecCCceeEEecCCCCCCCCeEEEEEEEEEECccchHhhcCCC----CCCCCcccCcceEEEEEEECCCCCcCCC
Confidence            467777777789999999999999999999999999999998877643    2345789999999999999999999999


Q ss_pred             CCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCccchhhhhhhHHHHHHHHHc
Q 017916           98 GDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRA  177 (364)
Q Consensus        98 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~lP~~~~~~~aa~~~~~~~a~~~l~~~  177 (364)
                      ||+|++++...|..|.+|..+....|++....+. ...|+|++|+.+++++++++|+++++++++++..+++||+++...
T Consensus        77 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~lP~~~~~~~aa~~~~~~ta~~~l~~~  155 (343)
T cd08236          77 GDRVAVNPLLPCGKCEYCKKGEYSLCSNYDYIGS-RRDGAFAEYVSVPARNLIKIPDHVDYEEAAMIEPAAVALHAVRLA  155 (343)
T ss_pred             CCEEEEcCCCCCCCChhHHCcChhhCCCcceEec-ccCCcccceEEechHHeEECcCCCCHHHHHhcchHHHHHHHHHhc
Confidence            9999999888999999999999999987654442 367999999999999999999999999988777788999999878


Q ss_pred             CCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcCCCccE
Q 017916          178 NIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDV  257 (364)
Q Consensus       178 ~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~  257 (364)
                      +++++++|||+|+|.+|++++|+|+.+|++.+++++.++++.++++++|++.+++++.  .. .+.++...  .+.++|+
T Consensus       156 ~~~~~~~vlI~g~g~~g~~~~~lA~~~G~~~v~~~~~~~~~~~~l~~~g~~~~~~~~~--~~-~~~~~~~~--~~~~~d~  230 (343)
T cd08236         156 GITLGDTVVVIGAGTIGLLAIQWLKILGAKRVIAVDIDDEKLAVARELGADDTINPKE--ED-VEKVRELT--EGRGADL  230 (343)
T ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCCEEecCcc--cc-HHHHHHHh--CCCCCCE
Confidence            8999999999987999999999999999975788888888889999999988777543  23 44454443  2457999


Q ss_pred             EEECCCCHHHHHHHHHhcccCCEEEEEcCCCCCc---cccchhhhhcCcEEEeeccC------CCcHHHHHHHHHcCCCC
Q 017916          258 SFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEM---TVPLTPAAVREVDVVGVFRY------KNTWPLCLELLRSGKID  328 (364)
Q Consensus       258 vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~---~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~l~~g~~~  328 (364)
                      +|||.|+...+..++++|+++|+++.+|......   .........+++++.+....      .+.++++.++++++.+.
T Consensus       231 vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  310 (343)
T cd08236         231 VIEAAGSPATIEQALALARPGGKVVLVGIPYGDVTLSEEAFEKILRKELTIQGSWNSYSAPFPGDEWRTALDLLASGKIK  310 (343)
T ss_pred             EEECCCCHHHHHHHHHHhhcCCEEEEEcccCCCcccccCCHHHHHhcCcEEEEEeeccccccchhhHHHHHHHHHcCCCC
Confidence            9999987788899999999999999998543321   11223345677777766432      45688899999999985


Q ss_pred             CCCceEEEeeCChhhHHHHHHHHhc-CCCceEEEE
Q 017916          329 VKPLVTHRFGFSQKEVEEAFETSAR-GGTAIKVMF  362 (364)
Q Consensus       329 ~~~~~~~~~~~~~~~~~~a~~~~~~-~~~~gkvvv  362 (364)
                      +.+.+.+.+++  ++++++++.+++ ....||+|+
T Consensus       311 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~k~v~  343 (343)
T cd08236         311 VEPLITHRLPL--EDGPAAFERLADREEFSGKVLL  343 (343)
T ss_pred             hHHheeeeecH--HHHHHHHHHHHcCCCCeeEEeC
Confidence            44556788888  999999999998 677888875

This group contains proteins identified as sorbitol dehydrogenases and other sugar dehydrogenases of the medium-chain dehydrogenase/reductase family (MDR), which includes zinc-dependent alcohol dehydrogenase and related proteins. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Related proteins include threonine dehydrogenase, formaldehyde dehydrogenase, and butanediol dehydrogenase. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast

>cd08263 Zn_ADH10 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=3.1e-39  Score=301.65  Aligned_cols=336  Identities=32%  Similarity=0.525  Sum_probs=277.2

Q ss_pred             ceeEEEecC-CceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCCCCCC--
Q 017916           18 NMAAWLLGV-NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT--   94 (364)
Q Consensus        18 ~~~~~~~~~-~~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~--   94 (364)
                      |+++++..+ ..+++.+.|.|.++++||+||+.++++|+.|+....+.+.    ..+|.++|+|++|+|+.+|+++++  
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~l~~~d~~~~~~~~~----~~~p~~~g~e~~G~v~~vG~~~~~~~   76 (367)
T cd08263           1 MKAAVLKGPNPPLTIEEIPVPRPKEGEILIRVAACGVCHSDLHVLKGELP----FPPPFVLGHEISGEVVEVGPNVENPY   76 (367)
T ss_pred             CeeEEEecCCCCcEEEEeeCCCCCCCeEEEEEEEeeeCcchHHHhcCCCC----CCCCcccccccceEEEEeCCCCCCCC
Confidence            467777665 5688899999999999999999999999999998876442    356789999999999999999988  


Q ss_pred             -CCCCCEEEEcCCcCCCCCccccCCCCCCCCCcccccc---------------------CCCCCcceeEEEecCCceEEC
Q 017916           95 -LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFAT---------------------PPVHGSLANQVVHPADLCFKL  152 (364)
Q Consensus        95 -~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------~~~~g~~~~~v~~~~~~~~~l  152 (364)
                       |++||+|++.+..+|..|.+|..++.++|.+..+++.                     ....|+|++|+.++.++++++
T Consensus        77 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~  156 (367)
T cd08263          77 GLSVGDRVVGSFIMPCGKCRYCARGKENLCEDFFAYNRLKGTLYDGTTRLFRLDGGPVYMYSMGGLAEYAVVPATALAPL  156 (367)
T ss_pred             cCCCCCEEEEcCCCCCCCChHHhCcCcccCcCccccccccccccCCcccccccCCCccccccCCcceeEEEechhhEEEC
Confidence             9999999998888999999999999999997642111                     013699999999999999999


Q ss_pred             CCCCCccchhhhh-hhHHHHHHHHH-cCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeE
Q 017916          153 PDNVSLEEGAMCE-PLSVGLHACRR-ANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNI  230 (364)
Q Consensus       153 P~~~~~~~aa~~~-~~~~a~~~l~~-~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~  230 (364)
                      |+++++.+++.+. .+.+||+++.. ..++++++|||+|+|.+|++++++|+++|++++++++.++++.+.++++|++.+
T Consensus       157 P~~is~~~aa~l~~~~~tA~~~l~~~~~~~~g~~VlI~g~g~vG~~~~~lak~~G~~~vi~~~~s~~~~~~~~~~g~~~v  236 (367)
T cd08263         157 PESLDYTESAVLGCAGFTAYGALKHAADVRPGETVAVIGVGGVGSSAIQLAKAFGASPIIAVDVRDEKLAKAKELGATHT  236 (367)
T ss_pred             CCCCCHHHHhHhcchHHHHHHHHHhcccCCCCCEEEEECCcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHhCCceE
Confidence            9999999988775 78899999854 678999999999779999999999999999768888888999999999999888


Q ss_pred             EecCCCcccHHHHHHHHHHHcCCCccEEEECCCCHHHHHHHHHhcccCCEEEEEcCCCC--CccccchhhhhcCcEEEee
Q 017916          231 VKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHH--EMTVPLTPAAVREVDVVGV  308 (364)
Q Consensus       231 ~~~~~~~~~~~~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~--~~~~~~~~~~~~~~~~~~~  308 (364)
                      ++++  ..++.+.++...  .+.++|++||++++.+....++++|+++|+++.++....  ...+....+..+++++.+.
T Consensus       237 ~~~~--~~~~~~~l~~~~--~~~~~d~vld~vg~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~  312 (367)
T cd08263         237 VNAA--KEDAVAAIREIT--GGRGVDVVVEALGKPETFKLALDVVRDGGRAVVVGLAPGGATAEIPITRLVRRGIKIIGS  312 (367)
T ss_pred             ecCC--cccHHHHHHHHh--CCCCCCEEEEeCCCHHHHHHHHHHHhcCCEEEEEccCCCCCccccCHHHHhhCCeEEEec
Confidence            7754  346666666553  256799999999965588899999999999999985432  1223334444678888775


Q ss_pred             ccC--CCcHHHHHHHHHcCCCCCCCceEEEeeCChhhHHHHHHHHhcCCCceEEEEe
Q 017916          309 FRY--KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFN  363 (364)
Q Consensus       309 ~~~--~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~  363 (364)
                      ...  .+.+++++++++++.+.+.+.+.+.|++  +++.+|++.++++...||+|+.
T Consensus       313 ~~~~~~~~~~~~~~ll~~~~l~~~~~~~~~~~~--~~~~~a~~~~~~~~~~g~~~~~  367 (367)
T cd08263         313 YGARPRQDLPELVGLAASGKLDPEALVTHKYKL--EEINEAYENLRKGLIHGRAIVE  367 (367)
T ss_pred             CCCCcHHHHHHHHHHHHcCCCCcccceeEEecH--HHHHHHHHHHhcCCccceeeeC
Confidence            443  3578899999999998544446788888  9999999999999889999974

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subu

>cd08260 Zn_ADH6 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=4.7e-39  Score=298.17  Aligned_cols=335  Identities=31%  Similarity=0.480  Sum_probs=277.0

Q ss_pred             ceeEEEecC-CceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCCCCCCCC
Q 017916           18 NMAAWLLGV-NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLV   96 (364)
Q Consensus        18 ~~~~~~~~~-~~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~   96 (364)
                      |+++++... .++++.+.+.|.+.+++|+||+.++++|+.|+....|.+..   ..+|.++|+|++|+|+.+|++++.++
T Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~---~~~~~~~g~e~~G~V~~~G~~~~~~~   77 (345)
T cd08260           1 MRAAVYEEFGEPLEIREVPDPEPPPDGVVVEVEACGVCRSDWHGWQGHDPD---VTLPHVPGHEFAGVVVEVGEDVSRWR   77 (345)
T ss_pred             CeeEEEecCCCCcEEEEccCCCCCCCeEEEEEEEeeccHHHHHHhcCCCCC---CCCCeeeccceeEEEEEECCCCccCC
Confidence            467776643 35888999999999999999999999999999988875431   35588999999999999999999999


Q ss_pred             CCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCC--ceEECCCCCCccchhhhh-hhHHHHHH
Q 017916           97 PGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPAD--LCFKLPDNVSLEEGAMCE-PLSVGLHA  173 (364)
Q Consensus        97 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~--~~~~lP~~~~~~~aa~~~-~~~~a~~~  173 (364)
                      +||+|++.....|.+|.+|+.+..++|.++...+. ..+|+|++|+.+++.  +++++|+++++++++.+. .+.+||++
T Consensus        78 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~v~~~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~  156 (345)
T cd08260          78 VGDRVTVPFVLGCGTCPYCRAGDSNVCEHQVQPGF-THPGSFAEYVAVPRADVNLVRLPDDVDFVTAAGLGCRFATAFRA  156 (345)
T ss_pred             CCCEEEECCCCCCCCCccccCcCcccCCCCccccc-CCCCcceeEEEcccccCceEECCCCCCHHHhhhhccchHHHHHH
Confidence            99999986667899999999999999999753332 247999999999985  999999999998888665 78899999


Q ss_pred             H-HHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcC
Q 017916          174 C-RRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMG  252 (364)
Q Consensus       174 l-~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~  252 (364)
                      + +.+++.++++|+|+|+|.+|++++++|+.+|+ .++++++++++.+.++++|++.+++++. ..++.+.++.+.   +
T Consensus       157 l~~~~~~~~~~~vlV~g~g~vg~~~~~~a~~~G~-~vi~~~~~~~~~~~~~~~g~~~~i~~~~-~~~~~~~~~~~~---~  231 (345)
T cd08260         157 LVHQARVKPGEWVAVHGCGGVGLSAVMIASALGA-RVIAVDIDDDKLELARELGAVATVNASE-VEDVAAAVRDLT---G  231 (345)
T ss_pred             HHHccCCCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHhCCCEEEcccc-chhHHHHHHHHh---C
Confidence            8 56888999999999999999999999999999 5677778888899999999988877543 245666666553   2


Q ss_pred             CCccEEEECCCCHHHHHHHHHhcccCCEEEEEcCCCCC---ccccchhhhhcCcEEEeeccC-CCcHHHHHHHHHcCCCC
Q 017916          253 TGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHE---MTVPLTPAAVREVDVVGVFRY-KNTWPLCLELLRSGKID  328 (364)
Q Consensus       253 ~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~---~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~g~~~  328 (364)
                      +++|++|||+|+.......+++|+++|+++.+|.....   ...+...+..+++++.+.... ...+++++++++++++.
T Consensus       232 ~~~d~vi~~~g~~~~~~~~~~~l~~~g~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~i~  311 (345)
T cd08260         232 GGAHVSVDALGIPETCRNSVASLRKRGRHVQVGLTLGEEAGVALPMDRVVARELEIVGSHGMPAHRYDAMLALIASGKLD  311 (345)
T ss_pred             CCCCEEEEcCCCHHHHHHHHHHhhcCCEEEEeCCcCCCCCccccCHHHHhhcccEEEeCCcCCHHHHHHHHHHHHcCCCC
Confidence            38999999999777888999999999999999854321   233444455778888886544 56788999999999985


Q ss_pred             CCCceEEEeeCChhhHHHHHHHHhcCCCceEEEEe
Q 017916          329 VKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFN  363 (364)
Q Consensus       329 ~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~  363 (364)
                      +.+.+...+++  +++++|++.++.+...||+|++
T Consensus       312 ~~~~~~~~~~~--~~~~~a~~~~~~~~~~~~~v~~  344 (345)
T cd08260         312 PEPLVGRTISL--DEAPDALAAMDDYATAGITVIT  344 (345)
T ss_pred             hhhheeEEecH--HHHHHHHHHHHcCCCCceEEec
Confidence            44446788888  9999999999999999999875

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group has the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (ty

>cd08291 ETR_like_1 2-enoyl thioester reductase (ETR) like proteins, child 1

Probab=100.00  E-value=9.8e-40  Score=300.06  Aligned_cols=305  Identities=21%  Similarity=0.269  Sum_probs=245.7

Q ss_pred             ceeEEEecC------CceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCCC
Q 017916           18 NMAAWLLGV------NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSE   91 (364)
Q Consensus        18 ~~~~~~~~~------~~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~   91 (364)
                      |+++++.++      +.+++.+.|.|.++++||+|||.++++|+.|+....|.+..  ...+|.++|+|++|+|+++|++
T Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~p~~~~~evlv~v~~~gi~~~d~~~~~g~~~~--~~~~p~v~G~e~~G~V~~vG~~   78 (324)
T cd08291           1 MKALLLEEYGKPLEVKELSLPEPEVPEPGPGEVLIKVEAAPINPSDLGFLKGQYGS--TKALPVPPGFEGSGTVVAAGGG   78 (324)
T ss_pred             CeEEEEeecCCCccccEEEecccCCCCCCCCeEEEEEEEccCCHHHHHHhcCcCCC--CCCCCcCCCcceEEEEEEECCC
Confidence            456666643      36888899999999999999999999999999988775422  1356899999999999999999


Q ss_pred             CCC-CCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCccchhhhh-hhHH
Q 017916           92 VKT-LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSV  169 (364)
Q Consensus        92 v~~-~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~lP~~~~~~~aa~~~-~~~~  169 (364)
                      +++ |++||+|++.+.                           .+|+|++|+.+++++++++|+++++++|+.+. .+.+
T Consensus        79 v~~~~~vGd~V~~~~~---------------------------~~g~~a~~~~v~~~~~~~iP~~~~~~~aa~~~~~~~t  131 (324)
T cd08291          79 PLAQSLIGKRVAFLAG---------------------------SYGTYAEYAVADAQQCLPLPDGVSFEQGASSFVNPLT  131 (324)
T ss_pred             ccccCCCCCEEEecCC---------------------------CCCcchheeeecHHHeEECCCCCCHHHHhhhcccHHH
Confidence            996 999999987521                           14999999999999999999999998887543 6667


Q ss_pred             HHHHHHHcCCCCCCEEEEE-cC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHH
Q 017916          170 GLHACRRANIGPETNVLIM-GA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKI  247 (364)
Q Consensus       170 a~~~l~~~~~~~g~~VLI~-Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~  247 (364)
                      ||.+++..+. ++++++|+ |+ |++|++++|+|+.+|+ .+++++.++++.++++++|+++++++..  .++.+.++++
T Consensus       132 a~~~~~~~~~-~~~~vlv~~~g~g~vG~~a~q~a~~~G~-~vi~~~~~~~~~~~~~~~g~~~~i~~~~--~~~~~~v~~~  207 (324)
T cd08291         132 ALGMLETARE-EGAKAVVHTAAASALGRMLVRLCKADGI-KVINIVRRKEQVDLLKKIGAEYVLNSSD--PDFLEDLKEL  207 (324)
T ss_pred             HHHHHHhhcc-CCCcEEEEccCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCcEEEECCC--ccHHHHHHHH
Confidence            8766655655 56667665 55 9999999999999999 5777888999999999999999888543  5777777665


Q ss_pred             HHHcCCCccEEEECCCCHHHHHHHHHhcccCCEEEEEcCCCC-Cc-cccchhhhhcCcEEEeeccC-------CCcHHHH
Q 017916          248 QKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHH-EM-TVPLTPAAVREVDVVGVFRY-------KNTWPLC  318 (364)
Q Consensus       248 ~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~-~~~~~~~~~~~~~~~~~~~~-------~~~~~~~  318 (364)
                      ..  +.++|++||++|+ ......+++++++|+++.+|.... .. .++...+..+++++.+....       .+.++++
T Consensus       208 ~~--~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  284 (324)
T cd08291         208 IA--KLNATIFFDAVGG-GLTGQILLAMPYGSTLYVYGYLSGKLDEPIDPVDLIFKNKSIEGFWLTTWLQKLGPEVVKKL  284 (324)
T ss_pred             hC--CCCCcEEEECCCc-HHHHHHHHhhCCCCEEEEEEecCCCCcccCCHHHHhhcCcEEEEEEHHHhhcccCHHHHHHH
Confidence            42  5689999999995 556778999999999999985322 22 23345567788888887543       2357788


Q ss_pred             HHHHHcCCCCCCCceEEEeeCChhhHHHHHHHHhcCCCceEEEEe
Q 017916          319 LELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFN  363 (364)
Q Consensus       319 ~~~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~  363 (364)
                      +++++ +++  ++.+.++|+|  +++.+|++.++++...||+++.
T Consensus       285 ~~~~~-~~~--~~~i~~~~~l--~~~~~a~~~~~~~~~~Gkvv~~  324 (324)
T cd08291         285 KKLVK-TEL--KTTFASRYPL--ALTLEAIAFYSKNMSTGKKLLI  324 (324)
T ss_pred             HHHHh-Ccc--ccceeeEEcH--HHHHHHHHHHHhCCCCCeEEeC
Confidence            88887 776  7788899999  9999999999999999999873

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordin

>TIGR01751 crot-CoA-red crotonyl-CoA reductase

Probab=100.00  E-value=2.5e-39  Score=305.18  Aligned_cols=343  Identities=22%  Similarity=0.254  Sum_probs=273.8

Q ss_pred             chhcceeEEEec-----C-CceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCC------c-cCCCC-ccccc
Q 017916           14 GEEVNMAAWLLG-----V-NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCAD------F-VVKEP-MVIGH   79 (364)
Q Consensus        14 ~~~~~~~~~~~~-----~-~~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~------~-~~~~p-~~~G~   79 (364)
                      ++.+|+|.++..     + +.+++.+.|.|.+.+++|+||+.++++|..|.....+.....      + ....| .++|+
T Consensus         4 ~~~~~~a~~~~~~~~~~~~~~~~~~~~~~p~l~~~evlV~v~~~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~G~   83 (398)
T TIGR01751         4 VPETMYAFAIREERDGDPRQAIQLEVVPVPELGPGEVLVAVMAAGVNYNNVWAALGEPVSTFAFLRKYGRDDLPFHIIGS   83 (398)
T ss_pred             cchhhhheEEecccCCCcccceEEeecCCCCCCCCeEEEEEEEEecCchhhhhhcCCccchhhhhcccCCCCCCceeccc
Confidence            445678887732     2 579999999999999999999999999999887665432110      0 01234 37999


Q ss_pred             ceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCcc
Q 017916           80 ECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLE  159 (364)
Q Consensus        80 e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~lP~~~~~~  159 (364)
                      |++|+|+++|++++.+++||+|++.+...|++|++|+.+++.+|..+...+....+|+|++|+.+++++++++|++++++
T Consensus        84 e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~ae~~~v~~~~~~~vP~~l~~~  163 (398)
T TIGR01751        84 DASGVVWRVGPGVTRWKVGDEVVASCLQVDLTAPDGRVGDPMLSSEQRIWGYETNFGSFAEFALVKDYQLMPKPKHLTWE  163 (398)
T ss_pred             ceEEEEEEeCCCCCCCCCCCEEEEccccccCCchhhccCccccccccccccccCCCccceEEEEechHHeEECCCCCCHH
Confidence            99999999999999999999999999999999999999999999876555444567999999999999999999999998


Q ss_pred             chhhhh-hhHHHHHHHH---HcCCCCCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecC
Q 017916          160 EGAMCE-PLSVGLHACR---RANIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVS  234 (364)
Q Consensus       160 ~aa~~~-~~~~a~~~l~---~~~~~~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~  234 (364)
                      +++.+. .+.+||+++.   .+++++|++|||+|+ |.+|++++++|+.+|++ +++++.++++.++++++|++.+++++
T Consensus       164 ~aa~~~~~~~ta~~al~~~~~~~~~~g~~vlV~Ga~g~vG~~ai~~ak~~G~~-vi~~~~~~~~~~~~~~~g~~~~v~~~  242 (398)
T TIGR01751       164 EAACPGLTGATAYRQLVGWNPATVKPGDNVLIWGAAGGLGSYATQLARAGGGN-PVAVVSSPEKAEYCRELGAEAVIDRN  242 (398)
T ss_pred             HHhhccchHHHHHHHHhhhhccCCCCCCEEEEEcCCcHHHHHHHHHHHHcCCe-EEEEcCCHHHHHHHHHcCCCEEecCC
Confidence            888665 8889999984   377899999999998 99999999999999995 56666788899999999999888764


Q ss_pred             CCc--------------------ccHHHHHHHHHHHcCCCccEEEECCCCHHHHHHHHHhcccCCEEEEEcCCCC-Cccc
Q 017916          235 TNL--------------------QDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHH-EMTV  293 (364)
Q Consensus       235 ~~~--------------------~~~~~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~  293 (364)
                      ...                    ..+.+.+.++.  .++++|++|||+| ...+...+++++++|+++.+|.... ....
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~g~d~vld~~g-~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~  319 (398)
T TIGR01751       243 DFGHWGRLPDLNTQAPKEWTKSFKRFGKRIRELT--GGEDPDIVFEHPG-RATFPTSVFVCRRGGMVVICGGTTGYNHDY  319 (398)
T ss_pred             CcchhhccccccccccchhhhcchhHHHHHHHHc--CCCCceEEEECCc-HHHHHHHHHhhccCCEEEEEccccCCCCCc
Confidence            310                    11233333332  2467999999999 5778899999999999999985432 2334


Q ss_pred             cchhhhhcCcEEEeeccC-CCcHHHHHHHHHcCCCCCCCceEEEeeCChhhHHHHHHHHhcCCCceEEEEeC
Q 017916          294 PLTPAAVREVDVVGVFRY-KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  364 (364)
Q Consensus       294 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  364 (364)
                      +...+..++.++.+.... .+.+++++++++++++  .+.+.+.|++  ++++++++.+.++...||+++++
T Consensus       320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l--~~~~~~~~~l--~~~~~a~~~~~~~~~~gkvvv~~  387 (398)
T TIGR01751       320 DNRYLWMRQKRIQGSHFANLREAWEANRLVAKGRI--DPTLSKVYPL--EEIGQAHQDVHRNHHQGNVAVLV  387 (398)
T ss_pred             CHHHHhhcccEEEccccCcHHHHHHHHHHHHCCCc--ccceeeEEcH--HHHHHHHHHHHcCCCCceEEEEe
Confidence            445555677777766533 3457889999999988  4557788888  99999999999999999999874

The enzyme modelled by this alignment is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae.

>cd05281 TDH Threonine dehydrogenase

Probab=100.00  E-value=5.8e-39  Score=297.01  Aligned_cols=337  Identities=32%  Similarity=0.551  Sum_probs=271.2

Q ss_pred             ceeEEEecCC-ceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCCCCCCCC
Q 017916           18 NMAAWLLGVN-TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLV   96 (364)
Q Consensus        18 ~~~~~~~~~~-~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~   96 (364)
                      |++++...++ .+++.+.+.|.+.++|++|||.++++|+.|+..+.+..........|.++|+|++|+|+.+|++++.++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~V~v~~~~~~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~~G~~v~~~~   80 (341)
T cd05281           1 MKAIVKTKAGPGAELVEVPVPKPGPGEVLIKVLAASICGTDVHIYEWDEWAQSRIKPPLIFGHEFAGEVVEVGEGVTRVK   80 (341)
T ss_pred             CcceEEecCCCceEEEeCCCCCCCCCeEEEEEEEEEEcccchHHHcCCCCccccCCCCcccccceEEEEEEECCCCCCCC
Confidence            4566766554 699999999999999999999999999999887544211111134577899999999999999999999


Q ss_pred             CCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCccchhhhhhhHHHHHHHHH
Q 017916           97 PGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRR  176 (364)
Q Consensus        97 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~lP~~~~~~~aa~~~~~~~a~~~l~~  176 (364)
                      +||+|++.+..+|..|.+|..+.+|+|....+.+ ....|+|++|+.+++++++++|++++.+.++++..+.++++++. 
T Consensus        81 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~v~v~~~~~~~lP~~~~~~~a~~~~~~~~a~~~~~-  158 (341)
T cd05281          81 VGDYVSAETHIVCGKCYQCRTGNYHVCQNTKILG-VDTDGCFAEYVVVPEENLWKNDKDIPPEIASIQEPLGNAVHTVL-  158 (341)
T ss_pred             CCCEEEECCccCCCCChHHHCcCcccCcccceEe-ccCCCcceEEEEechHHcEECcCCCCHHHhhhhhHHHHHHHHHH-
Confidence            9999999988999999999999999998765444 34579999999999999999999999866666668888888775 


Q ss_pred             cCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcCCCcc
Q 017916          177 ANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGID  256 (364)
Q Consensus       177 ~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d  256 (364)
                      ...++|++|||+|+|.+|++++|+|+++|...+++++++++|.++++++|+++++++.  ..++. .++++.  .++++|
T Consensus       159 ~~~~~g~~vlV~g~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~--~~~~~-~~~~~~--~~~~vd  233 (341)
T cd05281         159 AGDVSGKSVLITGCGPIGLMAIAVAKAAGASLVIASDPNPYRLELAKKMGADVVINPR--EEDVV-EVKSVT--DGTGVD  233 (341)
T ss_pred             hcCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCcceeeCcc--cccHH-HHHHHc--CCCCCC
Confidence            4457899999988899999999999999986677778888999999999998776643  34555 565543  256899


Q ss_pred             EEEECCCCHHHHHHHHHhcccCCEEEEEcCCCCCccccch-hhhhcCcEEEeeccC--CCcHHHHHHHHHcCCCCCCCce
Q 017916          257 VSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLT-PAAVREVDVVGVFRY--KNTWPLCLELLRSGKIDVKPLV  333 (364)
Q Consensus       257 ~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~--~~~~~~~~~~l~~g~~~~~~~~  333 (364)
                      ++|||+|+.+....++++|+++|+++.++........... ....+++.+.+....  .+.+.++++++.++.+.+.+.+
T Consensus       234 ~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~  313 (341)
T cd05281         234 VVLEMSGNPKAIEQGLKALTPGGRVSILGLPPGPVDIDLNNLVIFKGLTVQGITGRKMFETWYQVSALLKSGKVDLSPVI  313 (341)
T ss_pred             EEEECCCCHHHHHHHHHHhccCCEEEEEccCCCCcccccchhhhccceEEEEEecCCcchhHHHHHHHHHcCCCChhHhe
Confidence            9999999888889999999999999999854332222222 255566676665432  4567889999999998655667


Q ss_pred             EEEeeCChhhHHHHHHHHhcCCCceEEEEeC
Q 017916          334 THRFGFSQKEVEEAFETSARGGTAIKVMFNL  364 (364)
Q Consensus       334 ~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  364 (364)
                      ...+++  +++++|++.+.++. .||++++.
T Consensus       314 ~~~~~~--~~~~~a~~~~~~~~-~gk~vv~~  341 (341)
T cd05281         314 THKLPL--EDFEEAFELMRSGK-CGKVVLYP  341 (341)
T ss_pred             EEEecH--HHHHHHHHHHhcCC-CceEEecC
Confidence            788888  99999999999988 99999863

L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)- dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria) and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.

>cd05283 CAD1 Cinnamyl alcohol dehydrogenases (CAD)

Probab=100.00  E-value=4e-39  Score=297.54  Aligned_cols=320  Identities=26%  Similarity=0.422  Sum_probs=267.6

Q ss_pred             CCceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCCCCCCCCCCCEEE-Ec
Q 017916           26 VNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVA-LE  104 (364)
Q Consensus        26 ~~~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~-~~  104 (364)
                      ..++++.+.+.|++.++||+|||.++++|+.|+....|.+.   ...+|.++|+|++|+|+++|+++++|++||+|+ ..
T Consensus         9 ~~~~~~~~~~~p~~~~~evlirv~a~~i~~~d~~~~~g~~~---~~~~p~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~   85 (337)
T cd05283           9 SGKLEPFTFERRPLGPDDVDIKITYCGVCHSDLHTLRNEWG---PTKYPLVPGHEIVGIVVAVGSKVTKFKVGDRVGVGC   85 (337)
T ss_pred             CCCceEEeccCCCCCCCeEEEEEEEecccchHHHHhcCCcC---CCCCCcccCcceeeEEEEECCCCcccCCCCEEEEec
Confidence            37899999999999999999999999999999998887542   235688999999999999999999999999997 44


Q ss_pred             CCcCCCCCccccCCCCCCCCCccccc------cCCCCCcceeEEEecCCceEECCCCCCccchhhhh-hhHHHHHHHHHc
Q 017916          105 PGISCWRCDHCKGGRYNLCPEMKFFA------TPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHACRRA  177 (364)
Q Consensus       105 ~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~g~~~~~v~~~~~~~~~lP~~~~~~~aa~~~-~~~~a~~~l~~~  177 (364)
                      ....|.+|.+|+.++.++|.++.++.      .....|+|++|+.++.++++++|+++++++++.+. .+.+||++++..
T Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~~~~~  165 (337)
T cd05283          86 QVDSCGTCEQCKSGEEQYCPKGVVTYNGKYPDGTITQGGYADHIVVDERFVFKIPEGLDSAAAAPLLCAGITVYSPLKRN  165 (337)
T ss_pred             CCCCCCCCccccCCchhcCcchhhcccccccCCCcCCCcceeEEEechhheEECCCCCCHHHhhhhhhHHHHHHHHHHhc
Confidence            55689999999999999999876542      12346999999999999999999999998888654 778999999877


Q ss_pred             CCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcCCCccE
Q 017916          178 NIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDV  257 (364)
Q Consensus       178 ~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~  257 (364)
                      .+++|++++|.|+|.+|++++++|+.+|+ .+++++.++++.++++++|++.+++...  .++.   +.    .++++|+
T Consensus       166 ~~~~g~~vlV~g~g~vG~~~~~~a~~~G~-~v~~~~~~~~~~~~~~~~g~~~vi~~~~--~~~~---~~----~~~~~d~  235 (337)
T cd05283         166 GVGPGKRVGVVGIGGLGHLAVKFAKALGA-EVTAFSRSPSKKEDALKLGADEFIATKD--PEAM---KK----AAGSLDL  235 (337)
T ss_pred             CCCCCCEEEEECCcHHHHHHHHHHHHcCC-eEEEEcCCHHHHHHHHHcCCcEEecCcc--hhhh---hh----ccCCceE
Confidence            79999999998889999999999999999 6788888888999999999888776432  2221   11    2468999


Q ss_pred             EEECCCCHHHHHHHHHhcccCCEEEEEcCCCCCccccchhhhhcCcEEEeeccC-CCcHHHHHHHHHcCCCCCCCceEEE
Q 017916          258 SFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY-KNTWPLCLELLRSGKIDVKPLVTHR  336 (364)
Q Consensus       258 vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~g~~~~~~~~~~~  336 (364)
                      +|||+|.......++++|+++|+++.+|.......++...+..+++++.+.... .+.+++++++++++++  .+.+ +.
T Consensus       236 v~~~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l--~~~~-~~  312 (337)
T cd05283         236 IIDTVSASHDLDPYLSLLKPGGTLVLVGAPEEPLPVPPFPLIFGRKSVAGSLIGGRKETQEMLDFAAEHGI--KPWV-EV  312 (337)
T ss_pred             EEECCCCcchHHHHHHHhcCCCEEEEEeccCCCCccCHHHHhcCceEEEEecccCHHHHHHHHHHHHhCCC--ccce-EE
Confidence            999999765678999999999999999865433344445556788998887654 5678899999999998  4444 77


Q ss_pred             eeCChhhHHHHHHHHhcCCCceEEEEe
Q 017916          337 FGFSQKEVEEAFETSARGGTAIKVMFN  363 (364)
Q Consensus       337 ~~~~~~~~~~a~~~~~~~~~~gkvvv~  363 (364)
                      |++  +++++||+.++++...||+|++
T Consensus       313 ~~~--~~~~~a~~~~~~~~~~~k~v~~  337 (337)
T cd05283         313 IPM--DGINEALERLEKGDVRYRFVLD  337 (337)
T ss_pred             EEH--HHHHHHHHHHHcCCCcceEeeC
Confidence            888  9999999999999999999875

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic

>TIGR00692 tdh L-threonine 3-dehydrogenase

Probab=100.00  E-value=5.3e-39  Score=297.17  Aligned_cols=329  Identities=33%  Similarity=0.603  Sum_probs=268.4

Q ss_pred             CceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCCCCCCCCCCCEEEEcCC
Q 017916           27 NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPG  106 (364)
Q Consensus        27 ~~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~  106 (364)
                      ..+++.+.|.|.++++||+|||.++++|+.|+.++.+..........|.++|+|++|+|+++|+++++|++||+|++.++
T Consensus         9 ~~~~l~~~~~p~~~~~ev~V~v~~~~~~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~   88 (340)
T TIGR00692         9 YGAELTEVPVPEPGPGEVLIKVLATSICGTDVHIYNWDEWAQSRIKPPQVVGHEVAGEVVGIGPGVEGIKVGDYVSVETH   88 (340)
T ss_pred             CCcEEEECCCCCCCCCeEEEEEEEEEEcccCHHHHcCCCCCCCCCCCCcccccceEEEEEEECCCCCcCCCCCEEEECCc
Confidence            56888899999999999999999999999999876543111111345778999999999999999999999999999999


Q ss_pred             cCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCccchhhhhhhHHHHHHHHHcCCCCCCEEE
Q 017916          107 ISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVL  186 (364)
Q Consensus       107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~lP~~~~~~~aa~~~~~~~a~~~l~~~~~~~g~~VL  186 (364)
                      ..|..|..|..+..++|.+..+++ ....|+|++|+.++++.++++|+++++..|+....+.++++++ ....++|++|+
T Consensus        89 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~lp~~~~~~~a~~~~~~~~a~~~~-~~~~~~g~~vl  166 (340)
T TIGR00692        89 IVCGKCYACRRGQYHVCQNTKIFG-VDTDGCFAEYAVVPAQNIWKNPKSIPPEYATIQEPLGNAVHTV-LAGPISGKSVL  166 (340)
T ss_pred             CCCCCChhhhCcChhhCcCcceEe-ecCCCcceeEEEeehHHcEECcCCCChHhhhhcchHHHHHHHH-HccCCCCCEEE
Confidence            999999999999999999976553 2357999999999999999999999987666666788888876 34568999999


Q ss_pred             EEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcCCCccEEEECCCCHH
Q 017916          187 IMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNK  266 (364)
Q Consensus       187 I~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid~~g~~~  266 (364)
                      |+|+|.+|++++|+|+.+|++.++++++++++.++++++|++.++++..  .++.+.+.++.  .++++|++|||+|+.+
T Consensus       167 I~~~g~vg~~a~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~--~~~~~~l~~~~--~~~~~d~vld~~g~~~  242 (340)
T TIGR00692       167 VTGAGPIGLMAIAVAKASGAYPVIVSDPNEYRLELAKKMGATYVVNPFK--EDVVKEVADLT--DGEGVDVFLEMSGAPK  242 (340)
T ss_pred             EECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCcEEEcccc--cCHHHHHHHhc--CCCCCCEEEECCCCHH
Confidence            9877999999999999999975777788889999999999987776533  56666666553  2567999999999778


Q ss_pred             HHHHHHHhcccCCEEEEEcCCCCCccccch-hhhhcCcEEEeeccC--CCcHHHHHHHHHcCCCCCCCceEEEeeCChhh
Q 017916          267 TMSTALSATRAGGKVCLVGMGHHEMTVPLT-PAAVREVDVVGVFRY--KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKE  343 (364)
Q Consensus       267 ~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~--~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~  343 (364)
                      .+...+++|+++|+++.+|........... .+..+.+++.+....  .+.+.+++++++++++.+.+.+.+.|++  ++
T Consensus       243 ~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~l--~~  320 (340)
T TIGR00692       243 ALEQGLQAVTPGGRVSLLGLPPGKVTIDFTNKVIFKGLTIYGITGRHMFETWYTVSRLIQSGKLDLDPIITHKFKF--DK  320 (340)
T ss_pred             HHHHHHHhhcCCCEEEEEccCCCCcccchhhhhhhcceEEEEEecCCchhhHHHHHHHHHcCCCChHHheeeeeeH--HH
Confidence            889999999999999999864332222233 456677777665432  3457889999999998644567788888  99


Q ss_pred             HHHHHHHHhcCCCceEEEEeC
Q 017916          344 VEEAFETSARGGTAIKVMFNL  364 (364)
Q Consensus       344 ~~~a~~~~~~~~~~gkvvv~~  364 (364)
                      +.++++.++++. .||+|+++
T Consensus       321 ~~~a~~~~~~~~-~gkvvv~~  340 (340)
T TIGR00692       321 FEKGFELMRSGQ-TGKVILSL  340 (340)
T ss_pred             HHHHHHHHhcCC-CceEEEeC
Confidence            999999998886 49999975

E. coli His-90 modulates substrate specificity and is believed part of the active site.

>cd08297 CAD3 Cinnamyl alcohol dehydrogenases (CAD)

Probab=100.00  E-value=1.3e-38  Score=294.69  Aligned_cols=334  Identities=30%  Similarity=0.453  Sum_probs=278.2

Q ss_pred             ceeEEEecCC--ceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCCCCCCC
Q 017916           18 NMAAWLLGVN--TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTL   95 (364)
Q Consensus        18 ~~~~~~~~~~--~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~   95 (364)
                      |+++++..++  .+++.+.+.|.+.+++|+||+.++++|+.|+.+..|.+...  ...|.++|+|++|+|+++|++++.+
T Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~--~~~~~~~g~e~~G~V~~vG~~~~~~   78 (341)
T cd08297           1 MKAAVVEEFGEKPYEVKDVPVPEPGPGEVLVKLEASGVCHTDLHAALGDWPVK--PKLPLIGGHEGAGVVVAVGPGVSGL   78 (341)
T ss_pred             CceEEeeccCCCCceEEEeeCCCCCCCeEEEEEEEeecchhHHHHHcCCCCcC--CCCCccCCcccceEEEEeCCCCCCC
Confidence            5678877654  89999999999999999999999999999998887654321  3457789999999999999999999


Q ss_pred             CCCCEEEEcC-CcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCccchhhhh-hhHHHHHH
Q 017916           96 VPGDRVALEP-GISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHA  173 (364)
Q Consensus        96 ~~Gd~V~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~lP~~~~~~~aa~~~-~~~~a~~~  173 (364)
                      ++||+|++.+ ...|..|.+|+.++..+|.+....+. ...|+|++|+.+++++++++|+++++.+++.+. .+.+||++
T Consensus        79 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~s~~~~~~~~~~~lp~~~~~~~~a~l~~~~~ta~~~  157 (341)
T cd08297          79 KVGDRVGVKWLYDACGKCEYCRTGDETLCPNQKNSGY-TVDGTFAEYAIADARYVTPIPDGLSFEQAAPLLCAGVTVYKA  157 (341)
T ss_pred             CCCCEEEEecCCCCCCCCccccCCCcccCCCcccccc-ccCCcceeEEEeccccEEECCCCCCHHHHHHHHcchHHHHHH
Confidence            9999999876 46699999999999999988765543 357999999999999999999999998888654 78899999


Q ss_pred             HHHcCCCCCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcC
Q 017916          174 CRRANIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMG  252 (364)
Q Consensus       174 l~~~~~~~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~  252 (364)
                      +...+++++++|||+|+ +.+|++++++|+++|+ .+++++.++++.+.++++|++.++++..  .++.+.+.++.  .+
T Consensus       158 ~~~~~~~~~~~vlV~g~~~~vg~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~v~~~~~--~~~~~~~~~~~--~~  232 (341)
T cd08297         158 LKKAGLKPGDWVVISGAGGGLGHLGVQYAKAMGL-RVIAIDVGDEKLELAKELGADAFVDFKK--SDDVEAVKELT--GG  232 (341)
T ss_pred             HHhcCCCCCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHcCCcEEEcCCC--ccHHHHHHHHh--cC
Confidence            87778999999999997 7899999999999999 5777778888989989999988877543  36666666553  25


Q ss_pred             CCccEEEECCCCHHHHHHHHHhcccCCEEEEEcCCCCC-ccccchhhhhcCcEEEeeccC-CCcHHHHHHHHHcCCCCCC
Q 017916          253 TGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHE-MTVPLTPAAVREVDVVGVFRY-KNTWPLCLELLRSGKIDVK  330 (364)
Q Consensus       253 ~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~g~~~~~  330 (364)
                      +++|++||+.++.+....++++++++|+++.+|..... ..+.......+++++.+.... .+.+++++++++++++  .
T Consensus       233 ~~vd~vl~~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l--~  310 (341)
T cd08297         233 GGAHAVVVTAVSAAAYEQALDYLRPGGTLVCVGLPPGGFIPLDPFDLVLRGITIVGSLVGTRQDLQEALEFAARGKV--K  310 (341)
T ss_pred             CCCCEEEEcCCchHHHHHHHHHhhcCCEEEEecCCCCCCCCCCHHHHHhcccEEEEeccCCHHHHHHHHHHHHcCCC--c
Confidence            68999999888788999999999999999999854332 233334455788888875543 4678999999999998  3


Q ss_pred             CceEEEeeCChhhHHHHHHHHhcCCCceEEEEeC
Q 017916          331 PLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  364 (364)
Q Consensus       331 ~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  364 (364)
                      +.+ ..|++  ++++++++.+..+...||+++++
T Consensus       311 ~~~-~~~~~--~~~~~a~~~~~~~~~~gkvvi~~  341 (341)
T cd08297         311 PHI-QVVPL--EDLNEVFEKMEEGKIAGRVVVDF  341 (341)
T ss_pred             cee-EEEcH--HHHHHHHHHHHcCCccceEEEeC
Confidence            433 66888  99999999999999999999875

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha

>PLN03154 putative allyl alcohol dehydrogenase; Provisional

Probab=100.00  E-value=4.1e-39  Score=297.98  Aligned_cols=295  Identities=18%  Similarity=0.204  Sum_probs=237.2

Q ss_pred             CCceEEEEe---cCC-CCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCccccc--ceeEEEEEeCCCCCCCCCCC
Q 017916           26 VNTLKIQPF---ELP-SLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGH--ECAGVIEKVGSEVKTLVPGD   99 (364)
Q Consensus        26 ~~~~~~~~~---~~p-~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~--e~~G~V~~vG~~v~~~~~Gd   99 (364)
                      ++.|++.+.   +.| ++++|||||||.++++||.|+..+.+.+.   ....|+++|+  |++|+|..+|++++.|++||
T Consensus        24 ~~~f~~~~~~~~~~~~~~~~gevlVkv~a~~inp~~~~~~~~~~~---~~~~p~~~G~~~~~~G~v~~vg~~v~~~~~Gd  100 (348)
T PLN03154         24 ETDMEVKLGNKIELKAPKGSGAFLVKNLYLSCDPYMRGRMRDFHD---SYLPPFVPGQRIEGFGVSKVVDSDDPNFKPGD  100 (348)
T ss_pred             cccEEEEeecccCCCCCCCCCeEEEEEEEEccCHHHHHhhhccCC---CCCCCcCCCCeeEeeEEEEEEecCCCCCCCCC
Confidence            367888884   555 35899999999999999998765433111   1235889997  88999999999999999999


Q ss_pred             EEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCc--eEE--CCCCCCcc-chhhhh-hhHHHHHH
Q 017916          100 RVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADL--CFK--LPDNVSLE-EGAMCE-PLSVGLHA  173 (364)
Q Consensus       100 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~--~~~--lP~~~~~~-~aa~~~-~~~~a~~~  173 (364)
                      +|++.                               |+|+||+.++++.  +++  +|++++++ +|+.++ .+.|||++
T Consensus       101 ~V~~~-------------------------------~~~aey~~v~~~~~~~~~~~~P~~~~~~~~aa~l~~~~~TA~~a  149 (348)
T PLN03154        101 LISGI-------------------------------TGWEEYSLIRSSDNQLRKIQLQDDIPLSYHLGLLGMAGFTAYAG  149 (348)
T ss_pred             EEEec-------------------------------CCcEEEEEEeccccceEEccCcCCCCHHHHHHHcccHHHHHHHH
Confidence            99864                               7899999999853  544  58999886 565554 88999999


Q ss_pred             H-HHcCCCCCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHH-HcCCCeEEecCCCcccHHHHHHHHHHH
Q 017916          174 C-RRANIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAK-ELGADNIVKVSTNLQDIAEEVEKIQKA  250 (364)
Q Consensus       174 l-~~~~~~~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~-~lg~~~~~~~~~~~~~~~~~i~~~~~~  250 (364)
                      + +.+++++|++|||+|+ |++|++++|+|+++|+ .++++++++++.++++ ++|++.++++... .++.+.+++..  
T Consensus       150 l~~~~~~~~g~~VlV~GaaG~vG~~aiqlAk~~G~-~Vi~~~~~~~k~~~~~~~lGa~~vi~~~~~-~~~~~~i~~~~--  225 (348)
T PLN03154        150 FYEVCSPKKGDSVFVSAASGAVGQLVGQLAKLHGC-YVVGSAGSSQKVDLLKNKLGFDEAFNYKEE-PDLDAALKRYF--  225 (348)
T ss_pred             HHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHhcCCCEEEECCCc-ccHHHHHHHHC--
Confidence            8 4588999999999998 9999999999999999 5778888889999887 7999999886431 35666666543  


Q ss_pred             cCCCccEEEECCCCHHHHHHHHHhcccCCEEEEEcCCCC-Cc-----cccchhhhhcCcEEEeeccC------CCcHHHH
Q 017916          251 MGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHH-EM-----TVPLTPAAVREVDVVGVFRY------KNTWPLC  318 (364)
Q Consensus       251 ~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~-----~~~~~~~~~~~~~~~~~~~~------~~~~~~~  318 (364)
                       ++++|++|||+| ...+..++++++++|+++.+|.... ..     ..+...++.+++++.|.+..      .+.++++
T Consensus       226 -~~gvD~v~d~vG-~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~k~~~i~g~~~~~~~~~~~~~~~~~  303 (348)
T PLN03154        226 -PEGIDIYFDNVG-GDMLDAALLNMKIHGRIAVCGMVSLNSLSASQGIHNLYNLISKRIRMQGFLQSDYLHLFPQFLENV  303 (348)
T ss_pred             -CCCcEEEEECCC-HHHHHHHHHHhccCCEEEEECccccCCCCCCCCcccHHHHhhccceEEEEEHHHHHHHHHHHHHHH
Confidence             458999999999 5788999999999999999985432 11     11334567788888887543      3457889


Q ss_pred             HHHHHcCCCCCCCceEEEeeCChhhHHHHHHHHhcCCCceEEEEeC
Q 017916          319 LELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  364 (364)
Q Consensus       319 ~~~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  364 (364)
                      ++++++|++  ++.+...|+|  +++++|++.++++...||+|+++
T Consensus       304 ~~l~~~G~l--~~~~~~~~~L--~~~~~A~~~l~~g~~~GKvVl~~  345 (348)
T PLN03154        304 SRYYKQGKI--VYIEDMSEGL--ESAPAALVGLFSGKNVGKQVIRV  345 (348)
T ss_pred             HHHHHCCCc--cCceecccCH--HHHHHHHHHHHcCCCCceEEEEe
Confidence            999999999  5667778889  99999999999999999999974

>cd08282 PFDH_like Pseudomonas putida aldehyde-dismutating formaldehyde dehydrogenase (PFDH)

Probab=100.00  E-value=1.3e-38  Score=298.01  Aligned_cols=334  Identities=27%  Similarity=0.436  Sum_probs=269.3

Q ss_pred             ceeEEEecCCceEEEEecCCCC-CCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCCCCCCCC
Q 017916           18 NMAAWLLGVNTLKIQPFELPSL-GPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLV   96 (364)
Q Consensus        18 ~~~~~~~~~~~~~~~~~~~p~~-~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~   96 (364)
                      |+++++.++..+++.+.|+|++ +++||+|||.++++|+.|+....|.+.    ...|.++|+|++|+|+++|++++.++
T Consensus         1 m~~~~~~~~~~~~~~~~~~p~~~~~~evlv~v~a~~i~~~D~~~~~g~~~----~~~p~~~g~e~~G~V~~vG~~v~~~~   76 (375)
T cd08282           1 MKAVVYGGPGNVAVEDVPDPKIEHPTDAIVRITTTAICGSDLHMYRGRTG----AEPGLVLGHEAMGEVEEVGSAVESLK   76 (375)
T ss_pred             CceEEEecCCceeEEeCCCCCCCCCCeEEEEEEEEeeCHHHHHHHcCCCC----CCCCceeccccEEEEEEeCCCCCcCC
Confidence            3567777788999999999996 799999999999999999998877542    34688999999999999999999999


Q ss_pred             CCCEEEEcCCcCCCCCccccCCCCCCCCCccc---------cccCCCCCcceeEEEecCC--ceEECCCCCCccc---hh
Q 017916           97 PGDRVALEPGISCWRCDHCKGGRYNLCPEMKF---------FATPPVHGSLANQVVHPAD--LCFKLPDNVSLEE---GA  162 (364)
Q Consensus        97 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~g~~~~~v~~~~~--~~~~lP~~~~~~~---aa  162 (364)
                      +||+|++.+..+|..|..|..++.++|.+..+         ......+|+|++|+.++.+  +++++|+++++++   ++
T Consensus        77 ~Gd~V~~~~~~~~g~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~~lP~~~~~~~~~~~a  156 (375)
T cd08282          77 VGDRVVVPFNVACGRCRNCKRGLTGVCLTVNPGRAGGAYGYVDMGPYGGGQAEYLRVPYADFNLLKLPDRDGAKEKDDYL  156 (375)
T ss_pred             CCCEEEEeCCCCCCCCHHHHCcCcccCCCCCcccccccccccccCCCCCeeeeEEEeecccCcEEECCCCCChhhhhhee
Confidence            99999998888999999999999998875321         1112346999999999976  9999999999883   44


Q ss_pred             hh-hhhHHHHHHHHHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHH
Q 017916          163 MC-EPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIA  241 (364)
Q Consensus       163 ~~-~~~~~a~~~l~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~  241 (364)
                      .+ ..+.+||+++..+++++|++|||+|+|.+|++++|+|+++|+..+++++.++++.++++++|+. .+++.  .+++.
T Consensus       157 ~~~~~~~ta~~a~~~~~~~~g~~vlI~g~g~vg~~~~~~a~~~G~~~vi~~~~~~~~~~~~~~~g~~-~v~~~--~~~~~  233 (375)
T cd08282         157 MLSDIFPTGWHGLELAGVQPGDTVAVFGAGPVGLMAAYSAILRGASRVYVVDHVPERLDLAESIGAI-PIDFS--DGDPV  233 (375)
T ss_pred             eecchHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCe-EeccC--cccHH
Confidence            44 4788999999778899999999988899999999999999986677788899999999999984 44432  35666


Q ss_pred             HHHHHHHHHcCCCccEEEECCCCH-----------HHHHHHHHhcccCCEEEEEcCCCCC-------------ccccchh
Q 017916          242 EEVEKIQKAMGTGIDVSFDCAGFN-----------KTMSTALSATRAGGKVCLVGMGHHE-------------MTVPLTP  297 (364)
Q Consensus       242 ~~i~~~~~~~~~~~d~vid~~g~~-----------~~~~~~~~~l~~~G~~v~~g~~~~~-------------~~~~~~~  297 (364)
                      +.++++.   ++++|++|||+|..           ..+..++++++++|+++.+|.....             ..+....
T Consensus       234 ~~i~~~~---~~~~d~v~d~~g~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~  310 (375)
T cd08282         234 EQILGLE---PGGVDRAVDCVGYEARDRGGEAQPNLVLNQLIRVTRPGGGIGIVGVYVAEDPGAGDAAAKQGELSFDFGL  310 (375)
T ss_pred             HHHHHhh---CCCCCEEEECCCCcccccccccchHHHHHHHHHHhhcCcEEEEEeccCCcccccccccccCccccccHHH
Confidence            6666553   35799999999854           2578999999999999887743211             1223344


Q ss_pred             hhhcCcEEEeeccC-CCcHHHHHHHHHcCCCCCCCceEEEeeCChhhHHHHHHHHhcCCCceEEEEeC
Q 017916          298 AAVREVDVVGVFRY-KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  364 (364)
Q Consensus       298 ~~~~~~~~~~~~~~-~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  364 (364)
                      +..++..+.+.... .+.+.+++++++++++.+...+.+.|++  +++++|++.+.++. .+|+|++.
T Consensus       311 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~l--~~~~~a~~~~~~~~-~~kvvv~~  375 (375)
T cd08282         311 LWAKGLSFGTGQAPVKKYNRQLRDLILAGRAKPSFVVSHVISL--EDAPEAYARFDKRL-ETKVVIKP  375 (375)
T ss_pred             HHhcCcEEEEecCCchhhHHHHHHHHHcCCCChHHcEEEEeeH--HHHHHHHHHHhcCC-ceEEEeCC
Confidence            55566666655443 5678889999999999543357899999  99999999999888 99999863

Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. PFDH converts 2 molecules of aldehydes to corresponding carboxylic acid and alcohol. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fo

>PRK13771 putative alcohol dehydrogenase; Provisional

Probab=100.00  E-value=6.4e-39  Score=295.96  Aligned_cols=327  Identities=26%  Similarity=0.440  Sum_probs=270.4

Q ss_pred             ceeEEEecCC-ceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCCCCCCCC
Q 017916           18 NMAAWLLGVN-TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLV   96 (364)
Q Consensus        18 ~~~~~~~~~~-~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~   96 (364)
                      |+++++.++. .+++.+.|.|.+.++||+||+.++++|+.|+....|...   ...+|.++|+|++|+|+.+|++++.++
T Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~v~V~v~~~~i~~~d~~~~~g~~~---~~~~~~~~g~e~~G~v~~~g~~~~~~~   77 (334)
T PRK13771          1 MKAVILPGFKQGYRIEEVPDPKPGKDEVVIKVNYAGLCYRDLLQLQGFYP---RMKYPVILGHEVVGTVEEVGENVKGFK   77 (334)
T ss_pred             CeeEEEcCCCCCcEEEeCCCCCCCCCeEEEEEEEEeechhhHHHhcCCCC---CCCCCeeccccceEEEEEeCCCCccCC
Confidence            5678878765 499999999999999999999999999999987776432   135578999999999999999998999


Q ss_pred             CCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCccchhhhh-hhHHHHHHHH
Q 017916           97 PGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHACR  175 (364)
Q Consensus        97 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~lP~~~~~~~aa~~~-~~~~a~~~l~  175 (364)
                      +||+|++.+..+|..|.+|..++.++|....+.+. ..+|+|++|+.++.++++++|+++++.+++.+. .+.+||+++.
T Consensus        78 ~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~lp~~~~~~~~a~l~~~~~~a~~~~~  156 (334)
T PRK13771         78 PGDRVASLLYAPDGTCEYCRSGEEAYCKNRLGYGE-ELDGFFAEYAKVKVTSLVKVPPNVSDEGAVIVPCVTGMVYRGLR  156 (334)
T ss_pred             CCCEEEECCCCCCcCChhhcCCCcccCcccccccc-ccCceeeeeeecchhceEECCCCCCHHHhhcccchHHHHHHHHH
Confidence            99999999888999999999999999998776553 457999999999999999999999988888665 8889999986


Q ss_pred             HcCCCCCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcCCC
Q 017916          176 RANIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTG  254 (364)
Q Consensus       176 ~~~~~~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~  254 (364)
                      ..+++++++|||+|+ |.+|++++++|+.+|+ .++++++++++.+.++++ ++.+++++    ++.+.++++    + +
T Consensus       157 ~~~~~~~~~vlI~g~~g~~g~~~~~la~~~g~-~vi~~~~~~~~~~~~~~~-~~~~~~~~----~~~~~v~~~----~-~  225 (334)
T PRK13771        157 RAGVKKGETVLVTGAGGGVGIHAIQVAKALGA-KVIAVTSSESKAKIVSKY-ADYVIVGS----KFSEEVKKI----G-G  225 (334)
T ss_pred             hcCCCCCCEEEEECCCccHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHH-HHHhcCch----hHHHHHHhc----C-C
Confidence            668899999999998 9999999999999999 467777888888888888 66555432    344444432    2 6


Q ss_pred             ccEEEECCCCHHHHHHHHHhcccCCEEEEEcCCCCCc--cccchhhhhcCcEEEeeccC-CCcHHHHHHHHHcCCCCCCC
Q 017916          255 IDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEM--TVPLTPAAVREVDVVGVFRY-KNTWPLCLELLRSGKIDVKP  331 (364)
Q Consensus       255 ~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~--~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~g~~~~~~  331 (364)
                      +|++|||+|+ .....++++|+++|+++.+|......  .........+++++.+.... .+.+++++++++++.+  .+
T Consensus       226 ~d~~ld~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l--~~  302 (334)
T PRK13771        226 ADIVIETVGT-PTLEESLRSLNMGGKIIQIGNVDPSPTYSLRLGYIILKDIEIIGHISATKRDVEEALKLVAEGKI--KP  302 (334)
T ss_pred             CcEEEEcCCh-HHHHHHHHHHhcCCEEEEEeccCCCCCcccCHHHHHhcccEEEEecCCCHHHHHHHHHHHHcCCC--cc
Confidence            9999999995 67789999999999999998543221  12333345677888776433 5678899999999998  45


Q ss_pred             ceEEEeeCChhhHHHHHHHHhcCCCceEEEEeC
Q 017916          332 LVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  364 (364)
Q Consensus       332 ~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  364 (364)
                      .+.+.|++  +++++|++.++++...||++++.
T Consensus       303 ~~~~~~~~--~~~~~a~~~~~~~~~~~kvv~~~  333 (334)
T PRK13771        303 VIGAEVSL--SEIDKALEELKDKSRIGKILVKP  333 (334)
T ss_pred             eEeeeEcH--HHHHHHHHHHHcCCCcceEEEec
Confidence            57788899  99999999999888899999863

>PRK09422 ethanol-active dehydrogenase/acetaldehyde-active reductase; Provisional

Probab=100.00  E-value=1.5e-38  Score=293.95  Aligned_cols=331  Identities=26%  Similarity=0.430  Sum_probs=269.8

Q ss_pred             ceeEEEecCCceE-EEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCCCCCCCC
Q 017916           18 NMAAWLLGVNTLK-IQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLV   96 (364)
Q Consensus        18 ~~~~~~~~~~~~~-~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~   96 (364)
                      |+++++..++... +++.|.|.+.++||+|||.++++|+.|+....|...    ...|.++|+|++|+|+.+|++++.|+
T Consensus         1 mka~~~~~~~~~~~~~~~~~p~~~~~evlv~v~~~~i~~~d~~~~~g~~~----~~~~~~~g~e~~G~V~~~G~~v~~~~   76 (338)
T PRK09422          1 MKAAVVNKDHTGDVVVEKTLRPLKHGEALVKMEYCGVCHTDLHVANGDFG----DKTGRILGHEGIGIVKEVGPGVTSLK   76 (338)
T ss_pred             CeEEEecCCCCCceEEEecCCCCCCCeEEEEEEEEeechhHHHHHcCCCC----CCCCccCCcccceEEEEECCCCccCC
Confidence            5778888665544 889999999999999999999999999988876432    12377999999999999999999999


Q ss_pred             CCCEEEEcCC-cCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCccchhhhh-hhHHHHHHH
Q 017916           97 PGDRVALEPG-ISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHAC  174 (364)
Q Consensus        97 ~Gd~V~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~lP~~~~~~~aa~~~-~~~~a~~~l  174 (364)
                      +||+|++.+. .+|..|.+|..+..++|.+....+ ...+|+|++|+.++.++++++|+++++.+++.+. .+.+||+++
T Consensus        77 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~~  155 (338)
T PRK09422         77 VGDRVSIAWFFEGCGHCEYCTTGRETLCRSVKNAG-YTVDGGMAEQCIVTADYAVKVPEGLDPAQASSITCAGVTTYKAI  155 (338)
T ss_pred             CCCEEEEccCCCCCCCChhhcCCCcccCCCccccC-ccccCcceeEEEEchHHeEeCCCCCCHHHeehhhcchhHHHHHH
Confidence            9999997554 569999999999999998765433 2357999999999999999999999998888665 778999999


Q ss_pred             HHcCCCCCCEEEEEcCCHHHHHHHHHHHH-CCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcCC
Q 017916          175 RRANIGPETNVLIMGAGPIGLVTMLGARA-FGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGT  253 (364)
Q Consensus       175 ~~~~~~~g~~VLI~Gag~~G~~ai~la~~-~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~  253 (364)
                      +.+++++|++|||+|+|++|++++++|+. .|+ .++++++++++.++++++|++.++++.. ..++.+.+++..   + 
T Consensus       156 ~~~~~~~g~~vlV~g~g~vG~~~~~la~~~~g~-~v~~~~~~~~~~~~~~~~g~~~v~~~~~-~~~~~~~v~~~~---~-  229 (338)
T PRK09422        156 KVSGIKPGQWIAIYGAGGLGNLALQYAKNVFNA-KVIAVDINDDKLALAKEVGADLTINSKR-VEDVAKIIQEKT---G-  229 (338)
T ss_pred             HhcCCCCCCEEEEECCcHHHHHHHHHHHHhCCC-eEEEEeCChHHHHHHHHcCCcEEecccc-cccHHHHHHHhc---C-
Confidence            77889999999999999999999999998 599 5788888999999999999988776532 134555555442   3 


Q ss_pred             CccEEEECCCCHHHHHHHHHhcccCCEEEEEcCCCCCccccchhhhhcCcEEEeeccC-CCcHHHHHHHHHcCCCCCCCc
Q 017916          254 GIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY-KNTWPLCLELLRSGKIDVKPL  332 (364)
Q Consensus       254 ~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~g~~~~~~~  332 (364)
                      ++|++|.+.++++.+..++++++++|+++.+|...............+...+.+.... .+.+++++++++++++  .+.
T Consensus       230 ~~d~vi~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l--~~~  307 (338)
T PRK09422        230 GAHAAVVTAVAKAAFNQAVDAVRAGGRVVAVGLPPESMDLSIPRLVLDGIEVVGSLVGTRQDLEEAFQFGAEGKV--VPK  307 (338)
T ss_pred             CCcEEEEeCCCHHHHHHHHHhccCCCEEEEEeeCCCCceecHHHHhhcCcEEEEecCCCHHHHHHHHHHHHhCCC--Ccc
Confidence            6886555555588999999999999999999864433344444566677888776543 5678899999999988  444


Q ss_pred             eEEEeeCChhhHHHHHHHHhcCCCceEEEEeC
Q 017916          333 VTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  364 (364)
Q Consensus       333 ~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  364 (364)
                      + ..+++  +++++|++.+.++...||+++++
T Consensus       308 v-~~~~~--~~~~~a~~~~~~~~~~gkvvv~~  336 (338)
T PRK09422        308 V-QLRPL--EDINDIFDEMEQGKIQGRMVIDF  336 (338)
T ss_pred             E-EEEcH--HHHHHHHHHHHcCCccceEEEec
Confidence            4 45788  99999999999999999999864

>cd08254 hydroxyacyl_CoA_DH 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase, N-benzyl-3-pyrrolidinol dehydrogenase, and other MDR family members

Probab=100.00  E-value=4.3e-38  Score=290.83  Aligned_cols=333  Identities=32%  Similarity=0.550  Sum_probs=275.9

Q ss_pred             ceeEEEecCC-c-eEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCCCCCCC
Q 017916           18 NMAAWLLGVN-T-LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTL   95 (364)
Q Consensus        18 ~~~~~~~~~~-~-~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~   95 (364)
                      |+++++.... . +.+.+.+.|.+.+++|+|||.++++|+.|+....|.+.  ....+|.++|+|++|+|+.+|++++++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~g~~~--~~~~~~~~~g~~~~G~v~~~G~~v~~~   78 (338)
T cd08254           1 MKAWRFHKGSKGLLVLEEVPVPEPGPGEVLVKVKAAGVCHSDLHILDGGVP--TLTKLPLTLGHEIAGTVVEVGAGVTNF   78 (338)
T ss_pred             CeeEEEecCCCCceEEeccCCCCCCCCeEEEEEEEEeeccHhHHHHcCCCc--ccCCCCEeccccccEEEEEECCCCccC
Confidence            4677777543 3 67788888999999999999999999999998877543  123567899999999999999999999


Q ss_pred             CCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCccchhhh-hhhHHHHHHH
Q 017916           96 VPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMC-EPLSVGLHAC  174 (364)
Q Consensus        96 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~lP~~~~~~~aa~~-~~~~~a~~~l  174 (364)
                      ++||+|++.+..+|..|.+|+.++.++|......+. ...|+|++|+.++.++++++|+++++.+++.+ ..+.+||+++
T Consensus        79 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~lp~~~~~~~a~~~~~~~~ta~~~l  157 (338)
T cd08254          79 KVGDRVAVPAVIPCGACALCRRGRGNLCLNQGMPGL-GIDGGFAEYIVVPARALVPVPDGVPFAQAAVATDAVLTPYHAV  157 (338)
T ss_pred             CCCCEEEECCCCCCCCChhhhCcCcccCCCCCcccc-ccCCcceeeEEechHHeEECCCCCCHHHhhhhcchHHHHHHHH
Confidence            999999998888999999999999999976554433 45799999999999999999999999888866 4889999998


Q ss_pred             H-HcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcCC
Q 017916          175 R-RANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGT  253 (364)
Q Consensus       175 ~-~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~  253 (364)
                      . ..+++++++|||.|+|.+|++++++|+.+|++ +++++.++++.+.++++|++.+++...  .++.+.+ .  ...++
T Consensus       158 ~~~~~~~~~~~vli~g~g~vG~~~~~la~~~G~~-V~~~~~s~~~~~~~~~~g~~~~~~~~~--~~~~~~~-~--~~~~~  231 (338)
T cd08254         158 VRAGEVKPGETVLVIGLGGLGLNAVQIAKAMGAA-VIAVDIKEEKLELAKELGADEVLNSLD--DSPKDKK-A--AGLGG  231 (338)
T ss_pred             HhccCCCCCCEEEEECCcHHHHHHHHHHHHcCCE-EEEEcCCHHHHHHHHHhCCCEEEcCCC--cCHHHHH-H--HhcCC
Confidence            5 47799999999987799999999999999994 788888899999999999987766432  3444444 2  22356


Q ss_pred             CccEEEECCCCHHHHHHHHHhcccCCEEEEEcCCCCCccccchhhhhcCcEEEeeccC-CCcHHHHHHHHHcCCCCCCCc
Q 017916          254 GIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY-KNTWPLCLELLRSGKIDVKPL  332 (364)
Q Consensus       254 ~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~g~~~~~~~  332 (364)
                      ++|++|||+|..+....++++|+++|+++.++............+..++.++.+.... .+.+..++++++++.+.  +.
T Consensus       232 ~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~l~--~~  309 (338)
T cd08254         232 GFDVIFDFVGTQPTFEDAQKAVKPGGRIVVVGLGRDKLTVDLSDLIARELRIIGSFGGTPEDLPEVLDLIAKGKLD--PQ  309 (338)
T ss_pred             CceEEEECCCCHHHHHHHHHHhhcCCEEEEECCCCCCCccCHHHHhhCccEEEEeccCCHHHHHHHHHHHHcCCCc--cc
Confidence            8999999998788899999999999999999865444444455667778888876544 56788999999999984  33


Q ss_pred             eEEEeeCChhhHHHHHHHHhcCCCceEEEEeC
Q 017916          333 VTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  364 (364)
Q Consensus       333 ~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  364 (364)
                       .+.|++  +++.++++.+.++...||+++++
T Consensus       310 -~~~~~~--~~~~~a~~~~~~~~~~~kvv~~~  338 (338)
T cd08254         310 -VETRPL--DEIPEVLERLHKGKVKGRVVLVP  338 (338)
T ss_pred             -ceeEcH--HHHHHHHHHHHcCCccceEEEeC
Confidence             577888  99999999999999999999874

This group contains enzymes of the zinc-dependent alcohol dehydrogenase family, including members (aka MDR) identified as 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase and N-benzyl-3-pyrrolidinol dehydrogenase. 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase catalyzes the conversion of 6-Hydroxycyclohex-1-enecarbonyl-CoA and NAD+ to 6-Ketoxycyclohex-1-ene-1-carboxyl-CoA,NADH, and H+. This group displays the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentatio

>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase

Probab=100.00  E-value=1.9e-38  Score=293.23  Aligned_cols=296  Identities=20%  Similarity=0.201  Sum_probs=236.7

Q ss_pred             CCceEEEEecC----CCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccce--eEEEEEeCCCCCCCCCCC
Q 017916           26 VNTLKIQPFEL----PSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHEC--AGVIEKVGSEVKTLVPGD   99 (364)
Q Consensus        26 ~~~~~~~~~~~----p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~--~G~V~~vG~~v~~~~~Gd   99 (364)
                      ++.|++++.++    |+++++||||||+++++||.|+....|.+..  ....|+++|+++  .|.+..+|++++.|++||
T Consensus        18 ~~~~~~~~~~~~~~~p~p~~~~vlv~v~~~~inp~d~~~~~g~~~~--~~~~p~~~g~~~~g~~~~~~v~~~v~~~~vGd   95 (338)
T cd08295          18 ESDLELRTTKLTLKVPPGGSGDVLVKNLYLSCDPYMRGRMKGHDDS--LYLPPFKPGEVITGYGVAKVVDSGNPDFKVGD   95 (338)
T ss_pred             ccceEEEEecCCcCCCCCCCCeEEEEEEEEeeCHHHHHhhccCCcc--ccCCCcCCCCeEeccEEEEEEecCCCCCCCCC
Confidence            46899999887    7899999999999999999999988774321  124578888754  455555788888999999


Q ss_pred             EEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecC-CceEECC-CCCCcc-chhhh-hhhHHHHHHH-
Q 017916          100 RVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPA-DLCFKLP-DNVSLE-EGAMC-EPLSVGLHAC-  174 (364)
Q Consensus       100 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~-~~~~~lP-~~~~~~-~aa~~-~~~~~a~~~l-  174 (364)
                      +|+++                               |+|+||+++++ .+++++| +++++. +++.+ .++.|||+++ 
T Consensus        96 ~V~~~-------------------------------g~~aey~~v~~~~~~~~lp~~~~~~~~~aa~l~~~~~tA~~~l~  144 (338)
T cd08295          96 LVWGF-------------------------------TGWEEYSLIPRGQDLRKIDHTDVPLSYYLGLLGMPGLTAYAGFY  144 (338)
T ss_pred             EEEec-------------------------------CCceeEEEecchhceeecCCCCCCHHHHHHhcccHHHHHHHHHH
Confidence            99864                               78999999999 7999995 568775 56555 4889999999 


Q ss_pred             HHcCCCCCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHH-cCCCeEEecCCCcccHHHHHHHHHHHcC
Q 017916          175 RRANIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKE-LGADNIVKVSTNLQDIAEEVEKIQKAMG  252 (364)
Q Consensus       175 ~~~~~~~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~-lg~~~~~~~~~~~~~~~~~i~~~~~~~~  252 (364)
                      +.+++++|++|||+|+ |++|++++|+|+.+|+ .++++++++++.+++++ +|+++++++... .++.+.++...   +
T Consensus       145 ~~~~~~~g~~VlI~Ga~G~vG~~aiqlAk~~G~-~Vi~~~~~~~~~~~~~~~lGa~~vi~~~~~-~~~~~~i~~~~---~  219 (338)
T cd08295         145 EVCKPKKGETVFVSAASGAVGQLVGQLAKLKGC-YVVGSAGSDEKVDLLKNKLGFDDAFNYKEE-PDLDAALKRYF---P  219 (338)
T ss_pred             HhcCCCCCCEEEEecCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhcCCceeEEcCCc-ccHHHHHHHhC---C
Confidence            4588999999999998 9999999999999999 57777788999999988 999988875432 36666665543   4


Q ss_pred             CCccEEEECCCCHHHHHHHHHhcccCCEEEEEcCCCCC-c-----cccchhhhhcCcEEEeeccC------CCcHHHHHH
Q 017916          253 TGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHE-M-----TVPLTPAAVREVDVVGVFRY------KNTWPLCLE  320 (364)
Q Consensus       253 ~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~-----~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~  320 (364)
                      .++|++||++| ...+..++++|+++|+++.+|..... .     ..+......+++++.++...      .+.++++++
T Consensus       220 ~gvd~v~d~~g-~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~  298 (338)
T cd08295         220 NGIDIYFDNVG-GKMLDAVLLNMNLHGRIAACGMISQYNLEWPEGVRNLLNIIYKRVKIQGFLVGDYLHRYPEFLEEMSG  298 (338)
T ss_pred             CCcEEEEECCC-HHHHHHHHHHhccCcEEEEecccccCCCCCCCCccCHHHHhhccceeeEEEehhhHHHHHHHHHHHHH
Confidence            68999999999 47889999999999999999853221 1     12234566777888775432      234788899


Q ss_pred             HHHcCCCCCCCceEEEeeCChhhHHHHHHHHhcCCCceEEEEeC
Q 017916          321 LLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  364 (364)
Q Consensus       321 ~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  364 (364)
                      ++.+|++  ++.+...|++  +++++|++.++++...||+|+++
T Consensus       299 l~~~g~l--~~~~~~~~~l--~~~~~A~~~~~~~~~~GkvVl~~  338 (338)
T cd08295         299 YIKEGKL--KYVEDIADGL--ESAPEAFVGLFTGSNIGKQVVKV  338 (338)
T ss_pred             HHHCCCe--EceeecccCH--HHHHHHHHHHhcCCCCceEEEEC
Confidence            9999998  4445566888  99999999999999999999975

This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in

>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=9.4e-38  Score=287.75  Aligned_cols=327  Identities=32%  Similarity=0.535  Sum_probs=268.9

Q ss_pred             ceeEEEec-CCceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCCCCCCCC
Q 017916           18 NMAAWLLG-VNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLV   96 (364)
Q Consensus        18 ~~~~~~~~-~~~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~   96 (364)
                      |+++++.. ++.+.+.+.|.|.+.+++|+|+|+++++|+.|+....|....   ...|.++|+|++|+|+.+|++++.++
T Consensus         1 m~a~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~---~~~~~~~g~e~~G~v~~~G~~v~~~~   77 (332)
T cd08259           1 MKAAILHKPNKPLQIEEVPDPEPGPGEVLIKVKAAGVCYRDLLFWKGFFPR---GKYPLILGHEIVGTVEEVGEGVERFK   77 (332)
T ss_pred             CeEEEEecCCCceEEEEccCCCCCCCeEEEEEEEEecchhhhHHhcCCCCC---CCCCeeccccceEEEEEECCCCccCC
Confidence            46777765 678999999999999999999999999999999988764321   34578999999999999999999999


Q ss_pred             CCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCccchhhhh-hhHHHHHHHH
Q 017916           97 PGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHACR  175 (364)
Q Consensus        97 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~lP~~~~~~~aa~~~-~~~~a~~~l~  175 (364)
                      +||+|++++...|..|.+|..+..++|.+....+ ....|+|++|+.++.++++++|+++++++++.+. .+.+||++++
T Consensus        78 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~v~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~l~  156 (332)
T cd08259          78 PGDRVILYYYIPCGKCEYCLSGEENLCRNRAEYG-EEVDGGFAEYVKVPERSLVKLPDNVSDESAALAACVVGTAVHALK  156 (332)
T ss_pred             CCCEEEECCCCCCcCChhhhCCCcccCCCccccc-cccCCeeeeEEEechhheEECCCCCCHHHHhhhccHHHHHHHHHH
Confidence            9999999998999999999999999999874433 4567999999999999999999999998888665 8889999997


Q ss_pred             HcCCCCCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcCCC
Q 017916          176 RANIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTG  254 (364)
Q Consensus       176 ~~~~~~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~  254 (364)
                      .+++++++++||+|+ |.+|++++++++..|++ ++.+.+++++.+.+++++.+.+++.+    ++.+.+...     .+
T Consensus       157 ~~~~~~~~~vlI~ga~g~vG~~~~~~a~~~g~~-v~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~-----~~  226 (332)
T cd08259         157 RAGVKKGDTVLVTGAGGGVGIHAIQLAKALGAR-VIAVTRSPEKLKILKELGADYVIDGS----KFSEDVKKL-----GG  226 (332)
T ss_pred             HhCCCCCCEEEEECCCCHHHHHHHHHHHHcCCe-EEEEeCCHHHHHHHHHcCCcEEEecH----HHHHHHHhc-----cC
Confidence            688999999999998 99999999999999995 66666788888888888887666532    144444433     27


Q ss_pred             ccEEEECCCCHHHHHHHHHhcccCCEEEEEcCCCCCc-cccchhhhhcCcEEEeeccC-CCcHHHHHHHHHcCCCCCCCc
Q 017916          255 IDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEM-TVPLTPAAVREVDVVGVFRY-KNTWPLCLELLRSGKIDVKPL  332 (364)
Q Consensus       255 ~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~g~~~~~~~  332 (364)
                      +|+++|++|. ......+++++++|+++.++...... .........++..+.+.... .+.+++++++++++.+  .+.
T Consensus       227 ~d~v~~~~g~-~~~~~~~~~~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l--~~~  303 (332)
T cd08259         227 ADVVIELVGS-PTIEESLRSLNKGGRLVLIGNVTPDPAPLRPGLLILKEIRIIGSISATKADVEEALKLVKEGKI--KPV  303 (332)
T ss_pred             CCEEEECCCh-HHHHHHHHHhhcCCEEEEEcCCCCCCcCCCHHHHHhCCcEEEEecCCCHHHHHHHHHHHHcCCC--ccc
Confidence            9999999994 56788999999999999997533221 12223334567776665433 5678899999999988  556


Q ss_pred             eEEEeeCChhhHHHHHHHHhcCCCceEEEEe
Q 017916          333 VTHRFGFSQKEVEEAFETSARGGTAIKVMFN  363 (364)
Q Consensus       333 ~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~  363 (364)
                      +.+.|++  +++++|++.+.++...||++++
T Consensus       304 ~~~~~~~--~~~~~a~~~~~~~~~~~kvv~~  332 (332)
T cd08259         304 IDRVVSL--EDINEALEDLKSGKVVGRIVLK  332 (332)
T ss_pred             eeEEEcH--HHHHHHHHHHHcCCcccEEEeC
Confidence            7788999  9999999999999889999874

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.

>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase

Probab=100.00  E-value=2.3e-38  Score=291.14  Aligned_cols=289  Identities=19%  Similarity=0.239  Sum_probs=232.3

Q ss_pred             cCCceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCCCCCCCCCCCEEEEc
Q 017916           25 GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALE  104 (364)
Q Consensus        25 ~~~~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~  104 (364)
                      +++.+++.+.+.|++++|||+|||.++++||.++.   |.+.   ....|.++|.|++|+|+++|+   .|++||+|++.
T Consensus        15 ~~~~l~~~~~~~p~~~~~evlv~v~a~~~n~~~~~---g~~~---~~~~~~i~G~~~~g~v~~~~~---~~~~GdrV~~~   85 (325)
T TIGR02825        15 TDSDFELKTVELPPLNNGEVLLEALFLSVDPYMRV---AAKR---LKEGDTMMGQQVARVVESKNV---ALPKGTIVLAS   85 (325)
T ss_pred             CCCceEEEeccCCCCCCCcEEEEEEEEecCHHHhc---ccCc---CCCCCcEecceEEEEEEeCCC---CCCCCCEEEEe
Confidence            56899999999999999999999999999996544   3221   123478999999999999774   59999999864


Q ss_pred             CCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEEC----CCCCCccch-hhh-hhhHHHHHHH-HHc
Q 017916          105 PGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKL----PDNVSLEEG-AMC-EPLSVGLHAC-RRA  177 (364)
Q Consensus       105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~l----P~~~~~~~a-a~~-~~~~~a~~~l-~~~  177 (364)
                                                     ++|++|+.++.+++.++    |+++++++| +++ .++.|||+++ +.+
T Consensus        86 -------------------------------~~~~~~~~~~~~~~~~l~~~~p~~~~~~~aaa~l~~~~~TA~~~l~~~~  134 (325)
T TIGR02825        86 -------------------------------PGWTSHSISDGKDLEKLLTEWPDTLPLSLALGTVGMPGLTAYFGLLEIC  134 (325)
T ss_pred             -------------------------------cCceeeEEechhheEEccccccCCCCHHHHHHhcccHHHHHHHHHHHHh
Confidence                                           56899999999998888    889998886 445 4889999998 568


Q ss_pred             CCCCCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcCCCcc
Q 017916          178 NIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGID  256 (364)
Q Consensus       178 ~~~~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d  256 (364)
                      ++++|++|||+|+ |++|++++|+|+.+|+ .++++++++++.++++++|++.++++... .++.+.++..   .++++|
T Consensus       135 ~~~~g~~VLI~ga~g~vG~~aiqlAk~~G~-~Vi~~~~s~~~~~~~~~lGa~~vi~~~~~-~~~~~~~~~~---~~~gvd  209 (325)
T TIGR02825       135 GVKGGETVMVNAAAGAVGSVVGQIAKLKGC-KVVGAAGSDEKVAYLKKLGFDVAFNYKTV-KSLEETLKKA---SPDGYD  209 (325)
T ss_pred             CCCCCCEEEEeCCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCEEEecccc-ccHHHHHHHh---CCCCeE
Confidence            8999999999996 9999999999999999 57777788999999999999998886532 2444444443   246899


Q ss_pred             EEEECCCCHHHHHHHHHhcccCCEEEEEcCCCC-----Ccc--ccchhhhhcCcEEEeeccC-------CCcHHHHHHHH
Q 017916          257 VSFDCAGFNKTMSTALSATRAGGKVCLVGMGHH-----EMT--VPLTPAAVREVDVVGVFRY-------KNTWPLCLELL  322 (364)
Q Consensus       257 ~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-----~~~--~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~l  322 (364)
                      ++||++| .+.+..++++++++|+++.+|....     ...  .....+..+.+++.++...       .+.++++++++
T Consensus       210 vv~d~~G-~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~  288 (325)
T TIGR02825       210 CYFDNVG-GEFSNTVIGQMKKFGRIAICGAISTYNRTGPLPPGPPPEIVIYQELRMEGFIVNRWQGEVRQKALKELLKWV  288 (325)
T ss_pred             EEEECCC-HHHHHHHHHHhCcCcEEEEecchhhcccCCCCCCCcchHHHhhhcceEeEEEehhhhhhhhHHHHHHHHHHH
Confidence            9999999 4677999999999999999985321     111  1233456677887776532       34678899999


Q ss_pred             HcCCCCCCCceEEEeeCChhhHHHHHHHHhcCCCceEEEEe
Q 017916          323 RSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFN  363 (364)
Q Consensus       323 ~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~  363 (364)
                      ++|++.  +.+...|++  +++.+|++.++++...||+|++
T Consensus       289 ~~g~l~--~~~~~~~~l--~~~~~A~~~~~~~~~~gkvVv~  325 (325)
T TIGR02825       289 LEGKIQ--YKEYVIEGF--ENMPAAFMGMLKGENLGKTIVK  325 (325)
T ss_pred             HCCCcc--cceeccccH--HHHHHHHHHHhcCCCCCeEEeC
Confidence            999984  445567888  9999999999999999999974

Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.

>cd08293 PTGR2 Prostaglandin reductase

Probab=100.00  E-value=2.6e-38  Score=293.22  Aligned_cols=299  Identities=20%  Similarity=0.251  Sum_probs=228.7

Q ss_pred             CCceEEEEecCCCC-CCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCCCCCCCCCCCEEEEc
Q 017916           26 VNTLKIQPFELPSL-GPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALE  104 (364)
Q Consensus        26 ~~~~~~~~~~~p~~-~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~  104 (364)
                      ++.+++.+.+.|++ +++||+|||+++||||.|+..........+...+|.++|+|++|+|+++|+++++|++||+|++.
T Consensus        20 ~~~~~~~~~~~p~~~~~~evlV~v~a~gin~~d~~~~~~~~~~~~~~~~~~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~   99 (345)
T cd08293          20 AENFRVEECTLPDELNEGQVLVRTLYLSVDPYMRCRMNEDTGTDYLAPWQLSQVLDGGGVGVVEESKHQKFAVGDIVTSF   99 (345)
T ss_pred             ccceEEEeccCCCCCCCCeEEEEEEEEecCHHHHhhcccccccccCCCccCCCceEeeEEEEEeccCCCCCCCCCEEEec
Confidence            47899999999987 49999999999999999864332110001123567899999999999999999999999999853


Q ss_pred             CCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCccc-----hhhhhhhHHHHHHH-HHcC
Q 017916          105 PGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEE-----GAMCEPLSVGLHAC-RRAN  178 (364)
Q Consensus       105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~lP~~~~~~~-----aa~~~~~~~a~~~l-~~~~  178 (364)
                                                    .++|+||+++++++++++|+++++.+     ++...++.+||+++ +.++
T Consensus       100 ------------------------------~~~~ae~~~v~~~~~~~iP~~~~~~~~~~~~a~~~~~~~ta~~al~~~~~  149 (345)
T cd08293         100 ------------------------------NWPWQTYAVLDGSSLEKVDPQLVDGHLSYFLGAVGLPGLTALIGIQEKGH  149 (345)
T ss_pred             ------------------------------CCCceeEEEecHHHeEEcCccccccchhHHhhhcCcHHHHHHHHHHHhcc
Confidence                                          15799999999999999999864432     23334788999998 4577


Q ss_pred             CCCC--CEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHH-cCCCeEEecCCCcccHHHHHHHHHHHcCCC
Q 017916          179 IGPE--TNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKE-LGADNIVKVSTNLQDIAEEVEKIQKAMGTG  254 (364)
Q Consensus       179 ~~~g--~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~-lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~  254 (364)
                      +++|  ++|||+|+ |++|++++|+|+++|+..|+++++++++.+++++ +|+++++++..  .++.+.++++.   +++
T Consensus       150 ~~~g~~~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~~~~~~~~~lGa~~vi~~~~--~~~~~~i~~~~---~~g  224 (345)
T cd08293         150 ITPGANQTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGSDEKCQLLKSELGFDAAINYKT--DNVAERLRELC---PEG  224 (345)
T ss_pred             CCCCCCCEEEEECCCcHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhcCCcEEEECCC--CCHHHHHHHHC---CCC
Confidence            8877  99999998 9999999999999999667888888889888876 99999887643  57777777653   468


Q ss_pred             ccEEEECCCCHHHHHHHHHhcccCCEEEEEcCCCC---Ccc--ccc----hhhh-hcCcEEEeecc--C----CCcHHHH
Q 017916          255 IDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHH---EMT--VPL----TPAA-VREVDVVGVFR--Y----KNTWPLC  318 (364)
Q Consensus       255 ~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~---~~~--~~~----~~~~-~~~~~~~~~~~--~----~~~~~~~  318 (364)
                      +|++||++|+ ..+..++++|+++|+++.+|....   +..  ...    ..+. .+.+.......  .    .+.++++
T Consensus       225 vd~vid~~g~-~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  303 (345)
T cd08293         225 VDVYFDNVGG-EISDTVISQMNENSHIILCGQISQYNKDVPYPPPLPEATEAILKERNITRERFLVLNYKDKFEEAIAQL  303 (345)
T ss_pred             ceEEEECCCc-HHHHHHHHHhccCCEEEEEeeeecccCccCccccccchhHHHhhhcceEEEEEEeeccHhHHHHHHHHH
Confidence            9999999995 567899999999999999984211   111  111    1111 23333322211  1    2346778


Q ss_pred             HHHHHcCCCCCCCceEEEeeCChhhHHHHHHHHhcCCCceEEEEeC
Q 017916          319 LELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  364 (364)
Q Consensus       319 ~~~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  364 (364)
                      +++++++++.  +.....|++  +++++|++.++++...||+|+++
T Consensus       304 ~~l~~~g~i~--~~~~~~~~l--~~~~~A~~~~~~~~~~gkvvl~~  345 (345)
T cd08293         304 SQWVKEGKLK--VKETVYEGL--ENAGEAFQSMMNGGNIGKQIVKV  345 (345)
T ss_pred             HHHHHCCCcc--ceeEEeecH--HHHHHHHHHHhcCCCCCeEEEEC
Confidence            8999999984  444455678  99999999999999999999975

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid

>TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase

Probab=100.00  E-value=8.1e-39  Score=287.61  Aligned_cols=260  Identities=25%  Similarity=0.405  Sum_probs=219.5

Q ss_pred             ccccceeEEEEEeCCCCC------CCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccC------CCCCcceeEEE
Q 017916           76 VIGHECAGVIEKVGSEVK------TLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATP------PVHGSLANQVV  143 (364)
Q Consensus        76 ~~G~e~~G~V~~vG~~v~------~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~g~~~~~v~  143 (364)
                      ++|||++|+|+++|++|+      +|++||||+..+..+|..|.+|+.++.++|.+..+++..      ..+|+|+||+.
T Consensus         1 v~GHE~~G~V~~vG~~v~~~~~~~~~~~GdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~~~~~~~~G~~aey~~   80 (280)
T TIGR03366         1 VLGHEIVGEVVALRGGFTPADDGVPLRLGQRVVWSVTVPCGRCFRCRRGLPQKCDSLRKYGHEALDSGWPLSGGYAEHCH   80 (280)
T ss_pred             CCCcccceEEEEeCCCccccccCCCCCCCCEEEEcCCCCCCCChhhhCcCcccCCChhhcCcccccCCccccccceeeEE
Confidence            589999999999999999      899999999988889999999999999999987665432      24699999999


Q ss_pred             ecCC-ceEECCCCCCccchhhhh-hhHHHHHHHHHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHH
Q 017916          144 HPAD-LCFKLPDNVSLEEGAMCE-PLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSV  221 (364)
Q Consensus       144 ~~~~-~~~~lP~~~~~~~aa~~~-~~~~a~~~l~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~  221 (364)
                      ++++ +++++|++++++.++.+. .+.++|++++.....+|++|||+|+|++|++++|+|+.+|+++|++++.+++|.++
T Consensus        81 v~~~~~~~~lP~~~~~~~aa~l~~~~~ta~~al~~~~~~~g~~VlV~G~G~vG~~~~~~ak~~G~~~Vi~~~~~~~r~~~  160 (280)
T TIGR03366        81 LPAGTAIVPVPDDLPDAVAAPAGCATATVMAALEAAGDLKGRRVLVVGAGMLGLTAAAAAAAAGAARVVAADPSPDRREL  160 (280)
T ss_pred             ecCCCcEEECCCCCCHHHhhHhhhHHHHHHHHHHhccCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHH
Confidence            9997 799999999999888765 77889999987777899999999999999999999999999768888889999999


Q ss_pred             HHHcCCCeEEecCCCcccHHHHHHHHHHHcCCCccEEEECCCCHHHHHHHHHhcccCCEEEEEcCCC--CCccccchhhh
Q 017916          222 AKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGH--HEMTVPLTPAA  299 (364)
Q Consensus       222 ~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~--~~~~~~~~~~~  299 (364)
                      ++++|++.++++..    ..+.++++.  .+.++|++||++|++..++.++++++++|+++.+|...  ....++...++
T Consensus       161 a~~~Ga~~~i~~~~----~~~~~~~~~--~~~g~d~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~i~~~~~~  234 (280)
T TIGR03366       161 ALSFGATALAEPEV----LAERQGGLQ--NGRGVDVALEFSGATAAVRACLESLDVGGTAVLAGSVFPGGPVALDPEQVV  234 (280)
T ss_pred             HHHcCCcEecCchh----hHHHHHHHh--CCCCCCEEEECCCChHHHHHHHHHhcCCCEEEEeccCCCCCceeeCHHHHH
Confidence            99999988776422    233344332  35689999999998888999999999999999999542  23455666788


Q ss_pred             hcCcEEEeeccC-CCcHHHHHHHHHcC--CCCCCCceEEEeeCChhh
Q 017916          300 VREVDVVGVFRY-KNTWPLCLELLRSG--KIDVKPLVTHRFGFSQKE  343 (364)
Q Consensus       300 ~~~~~~~~~~~~-~~~~~~~~~~l~~g--~~~~~~~~~~~~~~~~~~  343 (364)
                      .+++++.++... ...++++++++.++  ++++.+++++.|++  ++
T Consensus       235 ~~~~~i~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~it~~~~l--~~  279 (280)
T TIGR03366       235 RRWLTIRGVHNYEPRHLDQAVRFLAANGQRFPFEELVGKPFPL--AD  279 (280)
T ss_pred             hCCcEEEecCCCCHHHHHHHHHHHHhhCCCCCHHHHhhccccc--cc
Confidence            899999998775 56799999999984  56566778888888  65

This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds.

>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2

Probab=100.00  E-value=1.9e-37  Score=284.81  Aligned_cols=306  Identities=26%  Similarity=0.296  Sum_probs=248.6

Q ss_pred             ceeEEEecCC----ceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCCCCC
Q 017916           18 NMAAWLLGVN----TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVK   93 (364)
Q Consensus        18 ~~~~~~~~~~----~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~   93 (364)
                      |+++++.++.    .+++.+.|.|.+.++||+|||.++++|+.|+..+.|.+..  ....|.++|+|++|+|+++|++++
T Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~p~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~--~~~~p~~~G~e~~G~V~~~G~~v~   78 (324)
T cd08292           1 MRAAVHTQFGDPADVLEIGEVPKPTPGAGEVLVRTTLSPIHNHDLWTIRGTYGY--KPELPAIGGSEAVGVVDAVGEGVK   78 (324)
T ss_pred             CeeEEEccCCChhHeEEEeecCCCCCCCCeEEEEEEEccCCHHHHHHhcCcCCC--CCCCCCCCCcceEEEEEEeCCCCC
Confidence            4667766442    4889999999999999999999999999999988775432  134588999999999999999999


Q ss_pred             CCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCccchhhhh-hhHHHHH
Q 017916           94 TLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLH  172 (364)
Q Consensus        94 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~lP~~~~~~~aa~~~-~~~~a~~  172 (364)
                      .+++||+|++.+                            ..|+|++|+.+++++++++|+++++++++.+. .+.++|+
T Consensus        79 ~~~~Gd~V~~~~----------------------------~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~  130 (324)
T cd08292          79 GLQVGQRVAVAP----------------------------VHGTWAEYFVAPADGLVPLPDGISDEVAAQLIAMPLSALM  130 (324)
T ss_pred             CCCCCCEEEecc----------------------------CCCcceeEEEEchHHeEECCCCCCHHHhhhccccHHHHHH
Confidence            999999998752                            25899999999999999999999998888665 6778898


Q ss_pred             HHHHcCCCCCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHc
Q 017916          173 ACRRANIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAM  251 (364)
Q Consensus       173 ~l~~~~~~~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~  251 (364)
                      +++.+++++|++|||+|+ |.+|++++|+|+++|++ ++++..++++.+.++++|++.+++++  ..++.+.+++..  .
T Consensus       131 ~~~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~G~~-v~~~~~~~~~~~~~~~~g~~~~~~~~--~~~~~~~i~~~~--~  205 (324)
T cd08292         131 LLDFLGVKPGQWLIQNAAGGAVGKLVAMLAAARGIN-VINLVRRDAGVAELRALGIGPVVSTE--QPGWQDKVREAA--G  205 (324)
T ss_pred             HHHhhCCCCCCEEEEcccccHHHHHHHHHHHHCCCe-EEEEecCHHHHHHHHhcCCCEEEcCC--CchHHHHHHHHh--C
Confidence            887789999999999987 99999999999999995 56666777777887889988777643  356666666553  3


Q ss_pred             CCCccEEEECCCCHHHHHHHHHhcccCCEEEEEcCCCC-CccccchhhhhcCcEEEeeccC-----------CCcHHHHH
Q 017916          252 GTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHH-EMTVPLTPAAVREVDVVGVFRY-----------KNTWPLCL  319 (364)
Q Consensus       252 ~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~  319 (364)
                      +.++|++|||+|+ .....++++++++|+++.+|.... ...+.......+++++.+....           .+.+++++
T Consensus       206 ~~~~d~v~d~~g~-~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  284 (324)
T cd08292         206 GAPISVALDSVGG-KLAGELLSLLGEGGTLVSFGSMSGEPMQISSGDLIFKQATVRGFWGGRWSQEMSVEYRKRMIAELL  284 (324)
T ss_pred             CCCCcEEEECCCC-hhHHHHHHhhcCCcEEEEEecCCCCCCcCCHHHHhhCCCEEEEEEcHHhhhhcCHHHHHHHHHHHH
Confidence            5689999999996 567899999999999999985422 2233444456688888876542           23578899


Q ss_pred             HHHHcCCCCCCCceEEEeeCChhhHHHHHHHHhcCCCceEEEEe
Q 017916          320 ELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFN  363 (364)
Q Consensus       320 ~~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~  363 (364)
                      +++.+|.+.  +.+.+.|++  +++.+|++.+.++...||+++.
T Consensus       285 ~l~~~g~i~--~~~~~~~~~--~~~~~a~~~~~~~~~~~kvvv~  324 (324)
T cd08292         285 TLALKGQLL--LPVEAVFDL--GDAAKAAAASMRPGRAGKVLLR  324 (324)
T ss_pred             HHHHCCCcc--CccccEecH--HHHHHHHHHHHcCCCCceEEeC
Confidence            999999984  334678888  9999999999988888999874

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina

>cd08298 CAD2 Cinnamyl alcohol dehydrogenases (CAD)

Probab=100.00  E-value=6.3e-37  Score=282.07  Aligned_cols=320  Identities=25%  Similarity=0.384  Sum_probs=261.9

Q ss_pred             ceeEEEecCC-----ceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCCCC
Q 017916           18 NMAAWLLGVN-----TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEV   92 (364)
Q Consensus        18 ~~~~~~~~~~-----~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v   92 (364)
                      |+++++..+.     .+++.+.+.|.+.++||+||+.++++|+.|+....|....   ..+|.++|+|++|+|+.+|+++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~irv~~~~i~~~d~~~~~g~~~~---~~~~~~~g~e~~G~V~~vG~~v   77 (329)
T cd08298           1 MKAMVLEKPGPIEENPLRLTEVPVPEPGPGEVLIKVEACGVCRTDLHIVEGDLPP---PKLPLIPGHEIVGRVEAVGPGV   77 (329)
T ss_pred             CeEEEEecCCCCCCCCceEEeccCCCCCCCEEEEEEEEEeccHHHHHHHhCCCCC---CCCCccccccccEEEEEECCCC
Confidence            4566666444     7888888888899999999999999999999988775422   3568899999999999999999


Q ss_pred             CCCCCCCEEEEcC-CcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCccchhhh-hhhHHH
Q 017916           93 KTLVPGDRVALEP-GISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMC-EPLSVG  170 (364)
Q Consensus        93 ~~~~~Gd~V~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~lP~~~~~~~aa~~-~~~~~a  170 (364)
                      ..+++||+|++.+ ..+|..|.+|..+++++|..+.+.+. ..+|+|++|+.++.+.++++|+++++.+++.+ ..+.+|
T Consensus        78 ~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~ta  156 (329)
T cd08298          78 TRFSVGDRVGVPWLGSTCGECRYCRSGRENLCDNARFTGY-TVDGGYAEYMVADERFAYPIPEDYDDEEAAPLLCAGIIG  156 (329)
T ss_pred             CCCcCCCEEEEeccCCCCCCChhHhCcChhhCCCcccccc-ccCCceEEEEEecchhEEECCCCCCHHHhhHhhhhhHHH
Confidence            9999999998754 46789999999999999998876654 34799999999999999999999999888755 488999


Q ss_pred             HHHHHHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHH
Q 017916          171 LHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKA  250 (364)
Q Consensus       171 ~~~l~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~  250 (364)
                      |++++.++++++++|||+|+|++|++++++|+..|+ .+++++.++++.+.++++|++..++++..              
T Consensus       157 ~~~~~~~~~~~~~~vlV~g~g~vg~~~~~la~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~~--------------  221 (329)
T cd08298         157 YRALKLAGLKPGQRLGLYGFGASAHLALQIARYQGA-EVFAFTRSGEHQELARELGADWAGDSDDL--------------  221 (329)
T ss_pred             HHHHHhhCCCCCCEEEEECCcHHHHHHHHHHHHCCC-eEEEEcCChHHHHHHHHhCCcEEeccCcc--------------
Confidence            999977999999999999889999999999999998 57777788889999999999876664321              


Q ss_pred             cCCCccEEEECCCCHHHHHHHHHhcccCCEEEEEcCCCCCc-cccchhhhhcCcEEEeeccC-CCcHHHHHHHHHcCCCC
Q 017916          251 MGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEM-TVPLTPAAVREVDVVGVFRY-KNTWPLCLELLRSGKID  328 (364)
Q Consensus       251 ~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~g~~~  328 (364)
                      .++++|+++++.+....+...+++++++|+++.+|...... ..+.. ...++..+.+.... .+.+++++++++++.+.
T Consensus       222 ~~~~vD~vi~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~-~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~l~  300 (329)
T cd08298         222 PPEPLDAAIIFAPVGALVPAALRAVKKGGRVVLAGIHMSDIPAFDYE-LLWGEKTIRSVANLTRQDGEEFLKLAAEIPIK  300 (329)
T ss_pred             CCCcccEEEEcCCcHHHHHHHHHHhhcCCEEEEEcCCCCCCCccchh-hhhCceEEEEecCCCHHHHHHHHHHHHcCCCC
Confidence            13579999998777789999999999999999987533211 11111 23455556555443 45688899999999884


Q ss_pred             CCCceEEEeeCChhhHHHHHHHHhcCCCceEEEE
Q 017916          329 VKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMF  362 (364)
Q Consensus       329 ~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv  362 (364)
                        + ..+.|++  +++++|++.++++...||+++
T Consensus       301 --~-~~~~~~~--~~~~~a~~~~~~~~~~~~~v~  329 (329)
T cd08298         301 --P-EVETYPL--EEANEALQDLKEGRIRGAAVL  329 (329)
T ss_pred             --c-eEEEEeH--HHHHHHHHHHHcCCCcceeeC
Confidence              3 3578888  999999999999999999874

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha

>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity

Probab=100.00  E-value=2.3e-37  Score=285.01  Aligned_cols=287  Identities=21%  Similarity=0.264  Sum_probs=231.2

Q ss_pred             CceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCCCCCCCCCCCEEEEcCC
Q 017916           27 NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPG  106 (364)
Q Consensus        27 ~~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~  106 (364)
                      +.+++.+.+.|+++++||+|||+++++||.|..+...      ....|.++|+|++|+|++   .++.|++||+|++.  
T Consensus        19 ~~l~~~~~~~p~~~~~evlVkv~a~~in~~~~~~~~~------~~~~p~v~G~e~~G~V~~---~~~~~~~Gd~V~~~--   87 (329)
T cd08294          19 SDFELVEEELPPLKDGEVLCEALFLSVDPYMRPYSKR------LNEGDTMIGTQVAKVIES---KNSKFPVGTIVVAS--   87 (329)
T ss_pred             cceEEEecCCCCCCCCcEEEEEEEEecCHHHhccccc------CCCCCcEecceEEEEEec---CCCCCCCCCEEEee--
Confidence            6799999999999999999999999999987652211      124588999999999984   45679999999853  


Q ss_pred             cCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCC---ceEECCCCCCc------cchhhhhhhHHHHHHH-HH
Q 017916          107 ISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPAD---LCFKLPDNVSL------EEGAMCEPLSVGLHAC-RR  176 (364)
Q Consensus       107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~---~~~~lP~~~~~------~~aa~~~~~~~a~~~l-~~  176 (364)
                                                   ++|++|+.++.+   .++++|+++++      ..+++..++.|||+++ +.
T Consensus        88 -----------------------------~~~~~~~~~~~~~~~~~~~iP~~~~~~~~~~~~~a~~~~~~~ta~~al~~~  138 (329)
T cd08294          88 -----------------------------FGWRTHTVSDGKDQPDLYKLPADLPDDLPPSLALGVLGMPGLTAYFGLLEI  138 (329)
T ss_pred             -----------------------------CCeeeEEEECCccccceEECCccccccCChHHHHHhcccHHHHHHHHHHHh
Confidence                                         578999999999   99999999872      2232334889999998 56


Q ss_pred             cCCCCCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcCCCc
Q 017916          177 ANIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGI  255 (364)
Q Consensus       177 ~~~~~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~  255 (364)
                      +++++|++|||+|+ |++|++++|+|+.+|+ .++++++++++.++++++|++++++++.  +++.+.++++.   +.++
T Consensus       139 ~~~~~g~~vlI~ga~g~vG~~aiqlA~~~G~-~vi~~~~s~~~~~~l~~~Ga~~vi~~~~--~~~~~~v~~~~---~~gv  212 (329)
T cd08294         139 CKPKAGETVVVNGAAGAVGSLVGQIAKIKGC-KVIGCAGSDDKVAWLKELGFDAVFNYKT--VSLEEALKEAA---PDGI  212 (329)
T ss_pred             cCCCCCCEEEEecCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCEEEeCCC--ccHHHHHHHHC---CCCc
Confidence            88999999999987 9999999999999999 5788888999999999999999888643  57777766553   4689


Q ss_pred             cEEEECCCCHHHHHHHHHhcccCCEEEEEcCCCC---Cc----cccchhhhhcCcEEEeeccC------CCcHHHHHHHH
Q 017916          256 DVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHH---EM----TVPLTPAAVREVDVVGVFRY------KNTWPLCLELL  322 (364)
Q Consensus       256 d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~---~~----~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~l  322 (364)
                      |++||++|+ +.+..++++++++|+++.+|....   ..    ......+..+++++.+....      .+.++++++++
T Consensus       213 d~vld~~g~-~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~  291 (329)
T cd08294         213 DCYFDNVGG-EFSSTVLSHMNDFGRVAVCGSISTYNDKEPKKGPYVQETIIFKQLKMEGFIVYRWQDRWPEALKQLLKWI  291 (329)
T ss_pred             EEEEECCCH-HHHHHHHHhhccCCEEEEEcchhccCCCCCCcCcccHHHHhhhcceEEEEEhhhhHHHHHHHHHHHHHHH
Confidence            999999995 788999999999999999874211   10    12233466788888876432      23477889999


Q ss_pred             HcCCCCCCCceEEEeeCChhhHHHHHHHHhcCCCceEEEEeC
Q 017916          323 RSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  364 (364)
Q Consensus       323 ~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  364 (364)
                      ++|++.  +.....|++  +++++|++.++++...||+++++
T Consensus       292 ~~g~i~--~~~~~~~~l--~~~~~A~~~~~~~~~~gkvvv~~  329 (329)
T cd08294         292 KEGKLK--YREHVTEGF--ENMPQAFIGMLKGENTGKAIVKV  329 (329)
T ss_pred             HCCCCc--CCcccccCH--HHHHHHHHHHHcCCCCCeEEEeC
Confidence            999984  334456788  99999999999999999999975

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac

>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=1.3e-36  Score=280.96  Aligned_cols=334  Identities=30%  Similarity=0.484  Sum_probs=271.9

Q ss_pred             ceeEEEe---cCCceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCCCCCC
Q 017916           18 NMAAWLL---GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT   94 (364)
Q Consensus        18 ~~~~~~~---~~~~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~   94 (364)
                      |+++++.   ++..+++.+.+.|.+.+++|+|++.++++|+.|+....|.+..  ....|.++|+|++|+|+.+|++++.
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~--~~~~~~~~g~e~~G~v~~~G~~~~~   78 (342)
T cd08266           1 MKAVVIRGHGGPEVLEYGDLPEPEPGPDEVLVRVKAAALNHLDLWVRRGMPGI--KLPLPHILGSDGAGVVEAVGPGVTN   78 (342)
T ss_pred             CeEEEEecCCCccceeEeecCCCCCCCCeEEEEEEeeecCHHHHHHhcCCCCC--CCCCCeecccceEEEEEEeCCCCCC
Confidence            4677777   4567888888888889999999999999999999888764321  1345889999999999999999999


Q ss_pred             CCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCccchhhhh-hhHHHHHH
Q 017916           95 LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHA  173 (364)
Q Consensus        95 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~lP~~~~~~~aa~~~-~~~~a~~~  173 (364)
                      |++||+|++.+..+|..|.+|..+.+++|.+..+.+. ...|+|++|+.++.+.++++|+++++.+++.+. .+.+|+++
T Consensus        79 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~~~g~~~~~~~~~~~~~~~~p~~~~~~~a~~~~~~~~~a~~~  157 (342)
T cd08266          79 VKPGQRVVIYPGISCGRCEYCLAGRENLCAQYGILGE-HVDGGYAEYVAVPARNLLPIPDNLSFEEAAAAPLTFLTAWHM  157 (342)
T ss_pred             CCCCCEEEEccccccccchhhcccccccccccccccc-ccCcceeEEEEechHHceeCCCCCCHHHHHhhhhHHHHHHHH
Confidence            9999999999999999999999999999998655443 457899999999999999999999998888765 77889998


Q ss_pred             H-HHcCCCCCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHc
Q 017916          174 C-RRANIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAM  251 (364)
Q Consensus       174 l-~~~~~~~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~  251 (364)
                      + +..+++++++++|+|+ +.+|++++++++..|++ ++.++.++++.+.++.++.+..++.  ...++.+.+....  .
T Consensus       158 l~~~~~~~~~~~vlI~g~~~~iG~~~~~~~~~~g~~-v~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~--~  232 (342)
T cd08266         158 LVTRARLRPGETVLVHGAGSGVGSAAIQIAKLFGAT-VIATAGSEDKLERAKELGADYVIDY--RKEDFVREVRELT--G  232 (342)
T ss_pred             HHHhcCCCCCCEEEEECCCchHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHcCCCeEEec--CChHHHHHHHHHh--C
Confidence            7 5688999999999998 79999999999999995 6777788888888888887666543  2344545554432  2


Q ss_pred             CCCccEEEECCCCHHHHHHHHHhcccCCEEEEEcCCCC-CccccchhhhhcCcEEEeeccC-CCcHHHHHHHHHcCCCCC
Q 017916          252 GTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHH-EMTVPLTPAAVREVDVVGVFRY-KNTWPLCLELLRSGKIDV  329 (364)
Q Consensus       252 ~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~g~~~~  329 (364)
                      +.++|+++|++| ...+...+++++++|+++.++.... ...........+++.+.+.... ...+.+++++++++.+  
T Consensus       233 ~~~~d~~i~~~g-~~~~~~~~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l--  309 (342)
T cd08266         233 KRGVDVVVEHVG-AATWEKSLKSLARGGRLVTCGATTGYEAPIDLRHVFWRQLSILGSTMGTKAELDEALRLVFRGKL--  309 (342)
T ss_pred             CCCCcEEEECCc-HHHHHHHHHHhhcCCEEEEEecCCCCCCCcCHHHHhhcceEEEEEecCCHHHHHHHHHHHHcCCc--
Confidence            457999999999 4678899999999999999974432 2223332345677777776544 4578889999999987  


Q ss_pred             CCceEEEeeCChhhHHHHHHHHhcCCCceEEEEeC
Q 017916          330 KPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  364 (364)
Q Consensus       330 ~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  364 (364)
                      .+.+.+.|++  +++++|++.+.++...+|+++++
T Consensus       310 ~~~~~~~~~~--~~~~~a~~~~~~~~~~~kvv~~~  342 (342)
T cd08266         310 KPVIDSVFPL--EEAAEAHRRLESREQFGKIVLTP  342 (342)
T ss_pred             ccceeeeEcH--HHHHHHHHHHHhCCCCceEEEeC
Confidence            5567788888  99999999999888889999864

This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone

>cd08274 MDR9 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=2e-36  Score=281.04  Aligned_cols=325  Identities=22%  Similarity=0.323  Sum_probs=253.2

Q ss_pred             ceeEEEecC---CceEEEE-ecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccC-----------------CccCCCCcc
Q 017916           18 NMAAWLLGV---NTLKIQP-FELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCA-----------------DFVVKEPMV   76 (364)
Q Consensus        18 ~~~~~~~~~---~~~~~~~-~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~-----------------~~~~~~p~~   76 (364)
                      |+++++..+   ..+.+.+ .+.|.+.+++|+|||.++++|++|+..+.|.+..                 .....+|.+
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~   80 (350)
T cd08274           1 MRAVLLTGHGGLDKLVYRDDVPVPTPAPGEVLIRVGACGVNNTDINTREGWYSTEVDGATDSTGAGEAGWWGGTLSFPRI   80 (350)
T ss_pred             CeEEEEeccCCccceeecccCCCCCCCCCeEEEEEEeccCCHHHHHHhcCCCCCccccccccccccccccccCCCCCCcc
Confidence            456666543   3556654 4777789999999999999999999888764321                 112456899


Q ss_pred             cccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCC
Q 017916           77 IGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNV  156 (364)
Q Consensus        77 ~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~lP~~~  156 (364)
                      +|||++|+|+++|+++++|++||+|++.+...|..|..|..        ...++ ...+|+|++|+.++.++++++|+++
T Consensus        81 ~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~--------~~~~~-~~~~g~~~~~~~v~~~~~~~ip~~~  151 (350)
T cd08274          81 QGADIVGRVVAVGEGVDTARIGERVLVDPSIRDPPEDDPAD--------IDYIG-SERDGGFAEYTVVPAENAYPVNSPL  151 (350)
T ss_pred             cCCcceEEEEEeCCCCCCCCCCCEEEEecCcCCCCcccccc--------ccccC-CCCCccceEEEEecHHHceeCCCCC
Confidence            99999999999999999999999999987777776655432        11111 1246999999999999999999999


Q ss_pred             Cccchhhhh-hhHHHHHHHHHcCCCCCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecC
Q 017916          157 SLEEGAMCE-PLSVGLHACRRANIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVS  234 (364)
Q Consensus       157 ~~~~aa~~~-~~~~a~~~l~~~~~~~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~  234 (364)
                      ++.+++.+. .+.+||++++..++++|++|||+|+ |++|++++++|+.+|++ +++++.++ +.+.++++|++.+.+. 
T Consensus       152 ~~~~~a~l~~~~~ta~~~~~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~g~~-vi~~~~~~-~~~~~~~~g~~~~~~~-  228 (350)
T cd08274         152 SDVELATFPCSYSTAENMLERAGVGAGETVLVTGASGGVGSALVQLAKRRGAI-VIAVAGAA-KEEAVRALGADTVILR-  228 (350)
T ss_pred             CHHHHHhcccHHHHHHHHHhhcCCCCCCEEEEEcCCcHHHHHHHHHHHhcCCE-EEEEeCch-hhHHHHhcCCeEEEeC-
Confidence            988877664 8889999987788999999999998 99999999999999996 55665554 7888899998754432 


Q ss_pred             CCcccHHHHHHHHHHHcCCCccEEEECCCCHHHHHHHHHhcccCCEEEEEcCCCCC-ccccchhhhhcCcEEEeeccC-C
Q 017916          235 TNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHE-MTVPLTPAAVREVDVVGVFRY-K  312 (364)
Q Consensus       235 ~~~~~~~~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~-~  312 (364)
                       ....+.+    ...+.+.++|++||++| .+.+..++++++++|+++.+|..... ...+...+..+++++.+.... .
T Consensus       229 -~~~~~~~----~~~~~~~~~d~vi~~~g-~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  302 (350)
T cd08274         229 -DAPLLAD----AKALGGEPVDVVADVVG-GPLFPDLLRLLRPGGRYVTAGAIAGPVVELDLRTLYLKDLTLFGSTLGTR  302 (350)
T ss_pred             -CCccHHH----HHhhCCCCCcEEEecCC-HHHHHHHHHHhccCCEEEEecccCCccccCCHHHhhhcceEEEEeecCCH
Confidence             2222222    22234568999999999 47889999999999999999854322 234444556788888877655 5


Q ss_pred             CcHHHHHHHHHcCCCCCCCceEEEeeCChhhHHHHHHHHhcCCCceEEEEeC
Q 017916          313 NTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  364 (364)
Q Consensus       313 ~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  364 (364)
                      +.+.++++++.++++  .+.+.+.|++  +++++|++.+..+...||++++.
T Consensus       303 ~~~~~~~~l~~~~~l--~~~~~~~~~~--~~~~~a~~~~~~~~~~~kvvi~~  350 (350)
T cd08274         303 EVFRRLVRYIEEGEI--RPVVAKTFPL--SEIREAQAEFLEKRHVGKLVLVP  350 (350)
T ss_pred             HHHHHHHHHHHCCCc--ccccccccCH--HHHHHHHHHHhcCCCceEEEEeC
Confidence            678999999999988  4556788888  99999999999988899999864

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08264 Zn_ADH_like2 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=2.3e-36  Score=277.88  Aligned_cols=319  Identities=27%  Similarity=0.413  Sum_probs=256.4

Q ss_pred             ceeEEEecC--CceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCCCCCCC
Q 017916           18 NMAAWLLGV--NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTL   95 (364)
Q Consensus        18 ~~~~~~~~~--~~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~   95 (364)
                      |+++++.++  ..+++.+.+.|+++++||+||+.++++|+.|+....+..    ...+|.++|+|++|+|+.+|++++.|
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~v~v~~~~i~~~d~~~~~~~~----~~~~~~~~g~e~~G~v~~vG~~v~~~   76 (325)
T cd08264           1 MKALVFEKSGIENLKVEDVKDPKPGPGEVLIRVKMAGVNPVDYNVINAVK----VKPMPHIPGAEFAGVVEEVGDHVKGV   76 (325)
T ss_pred             CeeEEeccCCCCceEEEeccCCCCCCCeEEEEEEEEEechHHHHHHhCCC----CCCCCeecccceeEEEEEECCCCCCC
Confidence            456766543  578888888888999999999999999999998776311    12357789999999999999999999


Q ss_pred             CCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCccchhhhh-hhHHHHHHH
Q 017916           96 VPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHAC  174 (364)
Q Consensus        96 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~lP~~~~~~~aa~~~-~~~~a~~~l  174 (364)
                      ++||+|++.+...|..|.+|+.++.++|.+..+.+. ...|+|++|+.++++.++++|+++++++++.+. .+.+||+++
T Consensus        77 ~~Gd~V~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~v~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~l  155 (325)
T cd08264          77 KKGDRVVVYNRVFDGTCDMCLSGNEMLCRNGGIIGV-VSNGGYAEYIVVPEKNLFKIPDSISDELAASLPVAALTAYHAL  155 (325)
T ss_pred             CCCCEEEECCCcCCCCChhhcCCCccccCccceeec-cCCCceeeEEEcCHHHceeCCCCCCHHHhhhhhhhhHHHHHHH
Confidence            999999999888999999999999999998765543 357999999999999999999999998888665 778999999


Q ss_pred             HHcCCCCCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcCC
Q 017916          175 RRANIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGT  253 (364)
Q Consensus       175 ~~~~~~~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~  253 (364)
                      +.+++++|++|+|+|+ |++|++++++|+++|++ +++++    +.+.++++|++++++.+    +..+.++++.    +
T Consensus       156 ~~~~~~~g~~vlI~g~~g~vg~~~~~~a~~~G~~-v~~~~----~~~~~~~~g~~~~~~~~----~~~~~l~~~~----~  222 (325)
T cd08264         156 KTAGLGPGETVVVFGASGNTGIFAVQLAKMMGAE-VIAVS----RKDWLKEFGADEVVDYD----EVEEKVKEIT----K  222 (325)
T ss_pred             HhcCCCCCCEEEEECCCchHHHHHHHHHHHcCCe-EEEEe----HHHHHHHhCCCeeecch----HHHHHHHHHh----C
Confidence            7789999999999998 99999999999999995 55554    23666889988777532    2234444432    5


Q ss_pred             CccEEEECCCCHHHHHHHHHhcccCCEEEEEcCCC-CCccccchhhhhcCcEEEeeccC-CCcHHHHHHHHHcCCCCCCC
Q 017916          254 GIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGH-HEMTVPLTPAAVREVDVVGVFRY-KNTWPLCLELLRSGKIDVKP  331 (364)
Q Consensus       254 ~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~g~~~~~~  331 (364)
                      ++|+++|++|+ ..+...+++|+++|+++.+|... .....+...+..++..+.+.... ++.++++++++...+    .
T Consensus       223 ~~d~vl~~~g~-~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~----~  297 (325)
T cd08264         223 MADVVINSLGS-SFWDLSLSVLGRGGRLVTFGTLTGGEVKLDLSDLYSKQISIIGSTGGTRKELLELVKIAKDLK----V  297 (325)
T ss_pred             CCCEEEECCCH-HHHHHHHHhhccCCEEEEEecCCCCCCccCHHHHhhcCcEEEEccCCCHHHHHHHHHHHHcCC----c
Confidence            79999999994 78899999999999999998532 22344445556667777776443 567888999885333    3


Q ss_pred             ceEEEeeCChhhHHHHHHHHhcCCCceEEE
Q 017916          332 LVTHRFGFSQKEVEEAFETSARGGTAIKVM  361 (364)
Q Consensus       332 ~~~~~~~~~~~~~~~a~~~~~~~~~~gkvv  361 (364)
                      .+.+.|++  +++++|++.+.++...+|++
T Consensus       298 ~~~~~~~~--~~~~~a~~~~~~~~~~~kv~  325 (325)
T cd08264         298 KVWKTFKL--EEAKEALKELFSKERDGRIL  325 (325)
T ss_pred             eeEEEEcH--HHHHHHHHHHHcCCCccccC
Confidence            45678888  99999999998887777753

This group resembles the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase family. However, this subgroup does not contain the characteristic catalytic zinc site. Also, it contains an atypical structural zinc-binding pattern: DxxCxxCxxxxxxxC. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the clo

>cd08245 CAD Cinnamyl alcohol dehydrogenases (CAD) and related proteins

Probab=100.00  E-value=9.8e-36  Score=274.25  Aligned_cols=325  Identities=26%  Similarity=0.416  Sum_probs=266.1

Q ss_pred             eeEEEecC-CceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCCCCCCCCC
Q 017916           19 MAAWLLGV-NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVP   97 (364)
Q Consensus        19 ~~~~~~~~-~~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~   97 (364)
                      +++++.++ ..+++.+.|.|.+.+++|+|++.++++|+.|+....|.+.   ...+|.++|+|++|+|+++|++++++++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~---~~~~p~~~g~e~~G~v~~~g~~~~~~~~   77 (330)
T cd08245           1 KAAVVHAAGGPLEPEEVPVPEPGPGEVLIKIEACGVCHTDLHAAEGDWG---GSKYPLVPGHEIVGEVVEVGAGVEGRKV   77 (330)
T ss_pred             CeEEEecCCCCceEEeccCCCCCCCeEEEEEEEEeccHHHHHHHcCCCC---CCCCCcccCccceEEEEEECCCCccccc
Confidence            35666766 6899999999999999999999999999999998877542   1346789999999999999999999999


Q ss_pred             CCEEEEcCC-cCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCccchhhhh-hhHHHHHHHH
Q 017916           98 GDRVALEPG-ISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHACR  175 (364)
Q Consensus        98 Gd~V~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~lP~~~~~~~aa~~~-~~~~a~~~l~  175 (364)
                      ||+|+..+. ..|.+|.+|+.++.++|++..+.+. ...|+|++|+.+++++++++|+++++.+++.+. .+.+||++++
T Consensus        78 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~v~~~~~~~~p~~~~~~~~~~l~~~~~ta~~~l~  156 (330)
T cd08245          78 GDRVGVGWLVGSCGRCEYCRRGLENLCQKAVNTGY-TTQGGYAEYMVADAEYTVLLPDGLPLAQAAPLLCAGITVYSALR  156 (330)
T ss_pred             CCEEEEccccCCCCCChhhhCcCcccCcCccccCc-ccCCccccEEEEcHHHeEECCCCCCHHHhhhhhhhHHHHHHHHH
Confidence            999987543 5699999999999999999765543 246999999999999999999999998888654 7789999987


Q ss_pred             HcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcCCCc
Q 017916          176 RANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGI  255 (364)
Q Consensus       176 ~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~  255 (364)
                      ..+++++++|||+|+|.+|++++++|+.+|+ .++++++++++.++++++|++.+++...  .+....       ..+++
T Consensus       157 ~~~~~~~~~vlI~g~g~iG~~~~~~a~~~G~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~~-------~~~~~  226 (330)
T cd08245         157 DAGPRPGERVAVLGIGGLGHLAVQYARAMGF-ETVAITRSPDKRELARKLGADEVVDSGA--ELDEQA-------AAGGA  226 (330)
T ss_pred             hhCCCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhCCcEEeccCC--cchHHh-------ccCCC
Confidence            7889999999999888899999999999999 5777778888889999999887766432  222111       13479


Q ss_pred             cEEEECCCCHHHHHHHHHhcccCCEEEEEcCCCCC-ccccchhhhhcCcEEEeeccC-CCcHHHHHHHHHcCCCCCCCce
Q 017916          256 DVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHE-MTVPLTPAAVREVDVVGVFRY-KNTWPLCLELLRSGKIDVKPLV  333 (364)
Q Consensus       256 d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~g~~~~~~~~  333 (364)
                      |++||++++......++++|+++|+++.++..... .......+..++.++.+.... .+.++++++++.++.+.  + .
T Consensus       227 d~vi~~~~~~~~~~~~~~~l~~~G~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~l~--~-~  303 (330)
T cd08245         227 DVILVTVVSGAAAEAALGGLRRGGRIVLVGLPESPPFSPDIFPLIMKRQSIAGSTHGGRADLQEALDFAAEGKVK--P-M  303 (330)
T ss_pred             CEEEECCCcHHHHHHHHHhcccCCEEEEECCCCCCccccchHHHHhCCCEEEEeccCCHHHHHHHHHHHHcCCCc--c-e
Confidence            99999988778889999999999999999753222 122233466677788776654 56788899999999984  3 4


Q ss_pred             EEEeeCChhhHHHHHHHHhcCCCceEEEE
Q 017916          334 THRFGFSQKEVEEAFETSARGGTAIKVMF  362 (364)
Q Consensus       334 ~~~~~~~~~~~~~a~~~~~~~~~~gkvvv  362 (364)
                      .+.|++  +++.+|++.+.++...||+++
T Consensus       304 ~~~~~~--~~~~~a~~~~~~~~~~~~~v~  330 (330)
T cd08245         304 IETFPL--DQANEAYERMEKGDVRFRFVL  330 (330)
T ss_pred             EEEEcH--HHHHHHHHHHHcCCCCcceeC
Confidence            477888  999999999999999999875

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an

>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]

Probab=100.00  E-value=4.3e-36  Score=256.01  Aligned_cols=294  Identities=18%  Similarity=0.188  Sum_probs=237.0

Q ss_pred             cCCceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEE--eCCCCCCCCCCCEEE
Q 017916           25 GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEK--VGSEVKTLVPGDRVA  102 (364)
Q Consensus        25 ~~~~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~--vG~~v~~~~~Gd~V~  102 (364)
                      .++.|++++.++|++++||||+|+.|.+++|-    +.|..........|+-+|-..+|.++.  +-|+..+|++||.|.
T Consensus        23 ~~d~F~lee~~vp~p~~GqvLl~~~ylS~DPy----mRgrm~d~~SY~~P~~lG~~~~gg~V~~Vv~S~~~~f~~GD~V~   98 (340)
T COG2130          23 VPDDFRLEEVDVPEPGEGQVLLRTLYLSLDPY----MRGRMSDAPSYAPPVELGEVMVGGTVAKVVASNHPGFQPGDIVV   98 (340)
T ss_pred             CCCCceeEeccCCCCCcCceEEEEEEeccCHH----HeecccCCcccCCCcCCCceeECCeeEEEEecCCCCCCCCCEEE
Confidence            34789999999999999999999999999992    223222221234466777666554433  236678899999998


Q ss_pred             EcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCccchh---hhhhhHHHHHHH-HHcC
Q 017916          103 LEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGA---MCEPLSVGLHAC-RRAN  178 (364)
Q Consensus       103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~lP~~~~~~~aa---~~~~~~~a~~~l-~~~~  178 (364)
                      ..                               .+|++|.+++.+.+.++.+..-+..+.   +-++..|||.+| +.++
T Consensus        99 ~~-------------------------------~GWq~y~i~~~~~l~Kvd~~~~pl~~~LgvLGmpG~TAY~gLl~igq  147 (340)
T COG2130          99 GV-------------------------------SGWQEYAISDGEGLRKLDPSPAPLSAYLGVLGMPGLTAYFGLLDIGQ  147 (340)
T ss_pred             ec-------------------------------ccceEEEeechhhceecCCCCCCcchHHhhcCCchHHHHHHHHHhcC
Confidence            65                               689999999999999998664433333   335888999998 5699


Q ss_pred             CCCCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHH-cCCCeEEecCCCcccHHHHHHHHHHHcCCCcc
Q 017916          179 IGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKE-LGADNIVKVSTNLQDIAEEVEKIQKAMGTGID  256 (364)
Q Consensus       179 ~~~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~-lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d  256 (364)
                      +++|++|+|.+| |++|..+.|+||..|+ +|+++..+++|.+++++ ||++.++||..  +++.+.+++.+   ++++|
T Consensus       148 pk~GetvvVSaAaGaVGsvvgQiAKlkG~-rVVGiaGg~eK~~~l~~~lGfD~~idyk~--~d~~~~L~~a~---P~GID  221 (340)
T COG2130         148 PKAGETVVVSAAAGAVGSVVGQIAKLKGC-RVVGIAGGAEKCDFLTEELGFDAGIDYKA--EDFAQALKEAC---PKGID  221 (340)
T ss_pred             CCCCCEEEEEecccccchHHHHHHHhhCC-eEEEecCCHHHHHHHHHhcCCceeeecCc--ccHHHHHHHHC---CCCeE
Confidence            999999999987 9999999999999999 79999999999999987 99999999876  58888777664   78999


Q ss_pred             EEEECCCCHHHHHHHHHhcccCCEEEEEcC---CCCC----ccccchhhhhcCcEEEeeccC-------CCcHHHHHHHH
Q 017916          257 VSFDCAGFNKTMSTALSATRAGGKVCLVGM---GHHE----MTVPLTPAAVREVDVVGVFRY-------KNTWPLCLELL  322 (364)
Q Consensus       257 ~vid~~g~~~~~~~~~~~l~~~G~~v~~g~---~~~~----~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~l  322 (364)
                      +.||++| ++.+...+..|+..+|++.+|.   ...+    ....+..++.+.+++.|+...       .+.++++.+|+
T Consensus       222 vyfeNVG-g~v~DAv~~~ln~~aRi~~CG~IS~YN~~~~~~gp~~l~~l~~kr~~v~Gfiv~~~~~~~~~e~~~~l~~wv  300 (340)
T COG2130         222 VYFENVG-GEVLDAVLPLLNLFARIPVCGAISQYNAPELPPGPRRLPLLMAKRLRVQGFIVASDYDQRFPEALRELGGWV  300 (340)
T ss_pred             EEEEcCC-chHHHHHHHhhccccceeeeeehhhcCCCCCCCCcchhhHHHhhhheeEEEEechhhhhhhHHHHHHHHHHH
Confidence            9999999 6899999999999999999984   1111    122334467789999998762       46688999999


Q ss_pred             HcCCCCCCCceEEEeeCChhhHHHHHHHHhcCCCceEEEEeC
Q 017916          323 RSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  364 (364)
Q Consensus       323 ~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  364 (364)
                      ++|+++.+..  -.-+|  |++++||..+.+++++||+|+++
T Consensus       301 ~~GKi~~~et--i~dGl--EnaP~Af~gLl~G~N~GK~vvKv  338 (340)
T COG2130         301 KEGKIQYRET--IVDGL--ENAPEAFIGLLSGKNFGKLVVKV  338 (340)
T ss_pred             HcCceeeEee--ehhhh--hccHHHHHHHhcCCccceEEEEe
Confidence            9999976653  33468  99999999999999999999975

>cd08258 Zn_ADH4 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=1.2e-35  Score=270.64  Aligned_cols=297  Identities=38%  Similarity=0.650  Sum_probs=245.9

Q ss_pred             eeEEEec--CCceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCCCCCCCC
Q 017916           19 MAAWLLG--VNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLV   96 (364)
Q Consensus        19 ~~~~~~~--~~~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~   96 (364)
                      ++++..+  +..+++.+.+.|++.+++|+|||.++++|+.|+....|.+.   ....|.++|+|++|+|+.+|++++.|+
T Consensus         2 ~~~~~~~~~~~~~~~~~~~~p~~~~~~v~V~v~~~~l~~~d~~~~~g~~~---~~~~p~~~G~e~~G~V~~vG~~v~~~~   78 (306)
T cd08258           2 KALVKTGPGPGNVELREVPEPEPGPGEVLIKVAAAGICGSDLHIYKGDYD---PVETPVVLGHEFSGTIVEVGPDVEGWK   78 (306)
T ss_pred             eeEEEecCCCCceEEeecCCCCCCCCeEEEEEEEEEechhhHHHHcCCCC---cCCCCeeeccceEEEEEEECCCcCcCC
Confidence            5666663  35699999999999999999999999999999988776541   134578999999999999999999999


Q ss_pred             CCCEEEEcCC-cCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCccchhhhhhhHHHHHHH-
Q 017916           97 PGDRVALEPG-ISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHAC-  174 (364)
Q Consensus        97 ~Gd~V~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~lP~~~~~~~aa~~~~~~~a~~~l-  174 (364)
                      +||+|++.+. .+|+.|++|..+..+.|.+..+.+ ....|+|++|+.++.++++++|+++++++|+.+..+.++|+++ 
T Consensus        79 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~~~~~~~a~~~l~  157 (306)
T cd08258          79 VGDRVVSETTFSTCGRCPYCRRGDYNLCPHRKGIG-TQADGGFAEYVLVPEESLHELPENLSLEAAALTEPLAVAVHAVA  157 (306)
T ss_pred             CCCEEEEccCcCCCCCCcchhCcCcccCCCCceee-ecCCCceEEEEEcchHHeEECcCCCCHHHHHhhchHHHHHHHHH
Confidence            9999999875 679999999999999998764433 3356999999999999999999999999887666888999998 


Q ss_pred             HHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEE--ecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcC
Q 017916          175 RRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIV--DVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMG  252 (364)
Q Consensus       175 ~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~--~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~  252 (364)
                      ..++++++++|||.|+|.+|++++|+|+++|++ ++.+  +.++++.++++++|++.+ ++  ...++.+.++.+.  .+
T Consensus       158 ~~~~~~~g~~vlI~g~g~~g~~~~~la~~~G~~-v~~~~~~~~~~~~~~~~~~g~~~~-~~--~~~~~~~~l~~~~--~~  231 (306)
T cd08258         158 ERSGIRPGDTVVVFGPGPIGLLAAQVAKLQGAT-VVVVGTEKDEVRLDVAKELGADAV-NG--GEEDLAELVNEIT--DG  231 (306)
T ss_pred             HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCE-EEEECCCCCHHHHHHHHHhCCccc-CC--CcCCHHHHHHHHc--CC
Confidence            558899999999987799999999999999996 4444  335567888899998776 54  3456777666553  25


Q ss_pred             CCccEEEECCCCHHHHHHHHHhcccCCEEEEEcCCC-CCccccchhhhhcCcEEEeeccC-CCcHHHHHHHHHcC
Q 017916          253 TGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGH-HEMTVPLTPAAVREVDVVGVFRY-KNTWPLCLELLRSG  325 (364)
Q Consensus       253 ~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~g  325 (364)
                      .++|++||++|+...+...+++|+++|+++.+|... ....++...++.+++++.|++.. +++++++++++++|
T Consensus       232 ~~vd~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~  306 (306)
T cd08258         232 DGADVVIECSGAVPALEQALELLRKGGRIVQVGIFGPLAASIDVERIIQKELSVIGSRSSTPASWETALRLLASG  306 (306)
T ss_pred             CCCCEEEECCCChHHHHHHHHHhhcCCEEEEEcccCCCCcccCHHHHhhcCcEEEEEecCchHhHHHHHHHHhcC
Confidence            689999999987788899999999999999998754 22444566777899999999876 77799999998875

This group shares the zinc coordination sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous

>cd08244 MDR_enoyl_red Possible enoyl reductase

Probab=100.00  E-value=3.2e-35  Score=270.01  Aligned_cols=311  Identities=26%  Similarity=0.296  Sum_probs=248.6

Q ss_pred             ceeEEEec---CCceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCCCCCC
Q 017916           18 NMAAWLLG---VNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT   94 (364)
Q Consensus        18 ~~~~~~~~---~~~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~   94 (364)
                      |+++++..   +..+++.+.+.|.+.+++|+|+|.++++|+.|+....|.....+....|.++|+|++|+|+++|++++.
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~g~e~~G~v~~~G~~v~~   80 (324)
T cd08244           1 MRAIRLHEFGPPEVLVPEDVPDPVPGPGQVRIAVAAAGVHFVDTQLRSGWGPGPFPPELPYVPGGEVAGVVDAVGPGVDP   80 (324)
T ss_pred             CeEEEEcCCCCccceEEeccCCCCCCCCEEEEEEEEEeCCHHHHHHhCCCCCCCCCCCCCcCCccceEEEEEEeCCCCCC
Confidence            46666664   346777777777789999999999999999999888775433223456789999999999999999999


Q ss_pred             CCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCccchhhhh-hhHHHHHH
Q 017916           95 LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHA  173 (364)
Q Consensus        95 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~lP~~~~~~~aa~~~-~~~~a~~~  173 (364)
                      +++||+|++...                          ...|+|++|+.++.++++++|+++++++++.+. .+.+||.+
T Consensus        81 ~~~Gd~V~~~~~--------------------------~~~g~~~~~~~v~~~~~~~lp~~~~~~~a~~~~~~~~ta~~~  134 (324)
T cd08244          81 AWLGRRVVAHTG--------------------------RAGGGYAELAVADVDSLHPVPDGLDLEAAVAVVHDGRTALGL  134 (324)
T ss_pred             CCCCCEEEEccC--------------------------CCCceeeEEEEEchHHeEeCCCCCCHHHHhhhcchHHHHHHH
Confidence            999999987521                          136999999999999999999999998887664 77788655


Q ss_pred             HHHcCCCCCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcC
Q 017916          174 CRRANIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMG  252 (364)
Q Consensus       174 l~~~~~~~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~  252 (364)
                      ++.++++++++|||+|+ |.+|++++++|+.+|+ .++++++++++.+.++++|++.++++.  ..++.+.+....  .+
T Consensus       135 ~~~~~~~~~~~vlI~g~~~~~g~~~~~la~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~--~~~~~~~~~~~~--~~  209 (324)
T cd08244         135 LDLATLTPGDVVLVTAAAGGLGSLLVQLAKAAGA-TVVGAAGGPAKTALVRALGADVAVDYT--RPDWPDQVREAL--GG  209 (324)
T ss_pred             HHhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCCEEEecC--CccHHHHHHHHc--CC
Confidence            57788999999999996 9999999999999999 577777888888999999998777643  345555555442  34


Q ss_pred             CCccEEEECCCCHHHHHHHHHhcccCCEEEEEcCCCCC-ccccchhhhhcCcEEEeeccC-------CCcHHHHHHHHHc
Q 017916          253 TGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHE-MTVPLTPAAVREVDVVGVFRY-------KNTWPLCLELLRS  324 (364)
Q Consensus       253 ~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~l~~  324 (364)
                      .++|+++|++|+ .....++++|+++|+++.+|..... ...+......+++++.+....       .+.+.++++++.+
T Consensus       210 ~~~d~vl~~~g~-~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  288 (324)
T cd08244         210 GGVTVVLDGVGG-AIGRAALALLAPGGRFLTYGWASGEWTALDEDDARRRGVTVVGLLGVQAERGGLRALEARALAEAAA  288 (324)
T ss_pred             CCceEEEECCCh-HhHHHHHHHhccCcEEEEEecCCCCCCccCHHHHhhCCcEEEEeecccCCHHHHHHHHHHHHHHHHC
Confidence            679999999995 4668899999999999999854322 223333456777887766443       3457788999999


Q ss_pred             CCCCCCCceEEEeeCChhhHHHHHHHHhcCCCceEEEEeC
Q 017916          325 GKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  364 (364)
Q Consensus       325 g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  364 (364)
                      +++  .+.+...|++  +++.+|++.+.++...||+++++
T Consensus       289 ~~l--~~~~~~~~~~--~~~~~a~~~~~~~~~~~kvv~~~  324 (324)
T cd08244         289 GRL--VPVVGQTFPL--ERAAEAHAALEARSTVGKVLLLP  324 (324)
T ss_pred             CCc--cCccceEEeH--HHHHHHHHHHHcCCCCceEEEeC
Confidence            988  4457788888  99999999999999999999874

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr

>TIGR02817 adh_fam_1 zinc-binding alcohol dehydrogenase family protein

Probab=100.00  E-value=8.3e-36  Score=275.41  Aligned_cols=299  Identities=20%  Similarity=0.303  Sum_probs=238.3

Q ss_pred             cCCceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCCCCCCCCCCCEEEEc
Q 017916           25 GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALE  104 (364)
Q Consensus        25 ~~~~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~  104 (364)
                      +++.+++.+.|.|+++++||+|||+++++|+.|+..+.|...   ...+|.++|+|++|+|+++|++++.|++||+|++.
T Consensus        13 ~~~~~~~~~~~~p~~~~~ev~Ikv~~~~i~~~d~~~~~g~~~---~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~   89 (336)
T TIGR02817        13 DPDALVDIDLPKPKPGGRDLLVEVKAISVNPVDTKVRARMAP---EAGQPKILGWDAAGVVVAVGDEVTLFKPGDEVWYA   89 (336)
T ss_pred             CcccceecccCCCCCCCCEEEEEEEEEEcChHHHHHHcCCCC---CCCCCcccceeeEEEEEEeCCCCCCCCCCCEEEEc
Confidence            357889999999999999999999999999999988876432   13568899999999999999999999999999864


Q ss_pred             CCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCccchhhhh-hhHHHHHHH-HHcCCCC-
Q 017916          105 PGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHAC-RRANIGP-  181 (364)
Q Consensus       105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~lP~~~~~~~aa~~~-~~~~a~~~l-~~~~~~~-  181 (364)
                      ..                         ....|+|++|+.+++++++++|+++++++++.++ .+.+||+++ ...++++ 
T Consensus        90 ~~-------------------------~~~~g~~~~~~~v~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~  144 (336)
T TIGR02817        90 GD-------------------------IDRPGSNAEFHLVDERIVGHKPKSLSFAEAAALPLTSITAWELLFDRLGINDP  144 (336)
T ss_pred             CC-------------------------CCCCCcccceEEEcHHHcccCCCCCCHHHHhhhhHHHHHHHHHHHHhcCCCCC
Confidence            20                         1235999999999999999999999999988665 788999998 5577777 


Q ss_pred             ----CCEEEEEcC-CHHHHHHHHHHHHC-CCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcCCCc
Q 017916          182 ----ETNVLIMGA-GPIGLVTMLGARAF-GAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGI  255 (364)
Q Consensus       182 ----g~~VLI~Ga-g~~G~~ai~la~~~-g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~  255 (364)
                          |++|||+|+ |++|++++|+|+.+ |+ .+++++.++++.++++++|++++++++   .++.+.+++.   .++++
T Consensus       145 ~~~~g~~vlV~ga~g~vg~~~~~~ak~~~G~-~vi~~~~~~~~~~~l~~~g~~~~~~~~---~~~~~~i~~~---~~~~v  217 (336)
T TIGR02817       145 VAGDKRALLIIGGAGGVGSILIQLARQLTGL-TVIATASRPESQEWVLELGAHHVIDHS---KPLKAQLEKL---GLEAV  217 (336)
T ss_pred             CCCCCCEEEEEcCCcHHHHHHHHHHHHhCCC-EEEEEcCcHHHHHHHHHcCCCEEEECC---CCHHHHHHHh---cCCCC
Confidence                999999987 99999999999998 98 577777888899999999999888754   2566666652   34689


Q ss_pred             cEEEECCCCHHHHHHHHHhcccCCEEEEEcCCCCCccccchhhhhcCcEEEeeccC-------------CCcHHHHHHHH
Q 017916          256 DVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY-------------KNTWPLCLELL  322 (364)
Q Consensus       256 d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~l  322 (364)
                      |+++|++++.+.....+++|+++|+++.++..   .......+..+++++.+....             ...++++++++
T Consensus       218 d~vl~~~~~~~~~~~~~~~l~~~G~~v~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  294 (336)
T TIGR02817       218 SYVFSLTHTDQHFKEIVELLAPQGRFALIDDP---AELDISPFKRKSISLHWEFMFTRSMFQTADMIEQHHLLNRVARLV  294 (336)
T ss_pred             CEEEEcCCcHHHHHHHHHHhccCCEEEEEccc---ccccchhhhhcceEEEEEEeecccccchhhhhhhHHHHHHHHHHH
Confidence            99999987678889999999999999988532   122333344444554432111             14578899999


Q ss_pred             HcCCCCCCCceEEEee-CChhhHHHHHHHHhcCCCceEEEEe
Q 017916          323 RSGKIDVKPLVTHRFG-FSQKEVEEAFETSARGGTAIKVMFN  363 (364)
Q Consensus       323 ~~g~~~~~~~~~~~~~-~~~~~~~~a~~~~~~~~~~gkvvv~  363 (364)
                      .++.+  ++.+.+.|+ ++.+++++|++.++++...||++++
T Consensus       295 ~~~~l--~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~  334 (336)
T TIGR02817       295 DAGKI--RTTLAETFGTINAANLKRAHALIESGKARGKIVLE  334 (336)
T ss_pred             HCCCe--eccchhccCCCCHHHHHHHHHHHHcCCccceEEEe
Confidence            99988  444444554 2238999999999999889999875

Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). While some current members of this family carry designations as putative alginate lyase, it seems no sequence with a direct characterization as such is detected by this model.

>cd08269 Zn_ADH9 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=5.1e-35  Score=267.26  Aligned_cols=300  Identities=30%  Similarity=0.458  Sum_probs=242.8

Q ss_pred             cCCceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhh-hhcccCCccCCCCcccccceeEEEEEeCCCCCCCCCCCEEEE
Q 017916           25 GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYL-KTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVAL  103 (364)
Q Consensus        25 ~~~~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~-~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~  103 (364)
                      +++.+++.+.+.|++.++||+||+.++++|+.|+..+ .|..... ....|.++|+|++|+|+.+|++++.+++||+|++
T Consensus         3 ~~~~~~~~~~~~~~l~~~ev~v~v~~~~i~~~d~~~~~~g~~~~~-~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~   81 (312)
T cd08269           3 GPGRFEVEEHPRPTPGPGQVLVRVEGCGVCGSDLPAFNQGRPWFV-YPAEPGGPGHEGWGRVVALGPGVRGLAVGDRVAG   81 (312)
T ss_pred             CCCeeEEEECCCCCCCCCeEEEEEEEeeecccchHHHccCCCCcc-cCCCCcccceeeEEEEEEECCCCcCCCCCCEEEE
Confidence            4567899999999999999999999999999999887 5532111 1235789999999999999999999999999997


Q ss_pred             cCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCccchhhh-hhhHHHHHHHHHcCCCCC
Q 017916          104 EPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMC-EPLSVGLHACRRANIGPE  182 (364)
Q Consensus       104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~lP~~~~~~~aa~~-~~~~~a~~~l~~~~~~~g  182 (364)
                      +                             ..|+|++|+.+++++++++|+++  ..++.. .++++++++++.++++++
T Consensus        82 ~-----------------------------~~g~~~~~~~v~~~~~~~lP~~~--~~~~~~~~~~~~a~~~~~~~~~~~~  130 (312)
T cd08269          82 L-----------------------------SGGAFAEYDLADADHAVPLPSLL--DGQAFPGEPLGCALNVFRRGWIRAG  130 (312)
T ss_pred             e-----------------------------cCCcceeeEEEchhheEECCCch--hhhHHhhhhHHHHHHHHHhcCCCCC
Confidence            5                             24899999999999999999998  233333 577889998888889999


Q ss_pred             CEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcCCCccEEEECC
Q 017916          183 TNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCA  262 (364)
Q Consensus       183 ~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid~~  262 (364)
                      ++|||+|+|.+|++++|+|+.+|++.++++.+++++.++++++|++.+++.  ...++.+.+.++.  .+.++|++|||.
T Consensus       131 ~~vlI~g~g~vg~~~~~la~~~g~~~v~~~~~~~~~~~~~~~~g~~~~~~~--~~~~~~~~l~~~~--~~~~vd~vld~~  206 (312)
T cd08269         131 KTVAVIGAGFIGLLFLQLAAAAGARRVIAIDRRPARLALARELGATEVVTD--DSEAIVERVRELT--GGAGADVVIEAV  206 (312)
T ss_pred             CEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCceEecC--CCcCHHHHHHHHc--CCCCCCEEEECC
Confidence            999999879999999999999999647778788888999999999877653  3356777776654  256899999999


Q ss_pred             CCHHHHHHHHHhcccCCEEEEEcCCC-CCccccchhhhhcCcEEEeeccC-----CCcHHHHHHHHHcCCCCCCCceEEE
Q 017916          263 GFNKTMSTALSATRAGGKVCLVGMGH-HEMTVPLTPAAVREVDVVGVFRY-----KNTWPLCLELLRSGKIDVKPLVTHR  336 (364)
Q Consensus       263 g~~~~~~~~~~~l~~~G~~v~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~l~~g~~~~~~~~~~~  336 (364)
                      |........+++|+++|+++.+|... ....+.......+++++.+....     .+.+++++++++++.+.+.+.+.+.
T Consensus       207 g~~~~~~~~~~~l~~~g~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  286 (312)
T cd08269         207 GHQWPLDLAGELVAERGRLVIFGYHQDGPRPVPFQTWNWKGIDLINAVERDPRIGLEGMREAVKLIADGRLDLGSLLTHE  286 (312)
T ss_pred             CCHHHHHHHHHHhccCCEEEEEccCCCCCcccCHHHHhhcCCEEEEecccCccchhhHHHHHHHHHHcCCCCchhheeee
Confidence            87778899999999999999998543 22233334566777877766433     3578999999999998533346678


Q ss_pred             eeCChhhHHHHHHHHhcCCC-ceEEEE
Q 017916          337 FGFSQKEVEEAFETSARGGT-AIKVMF  362 (364)
Q Consensus       337 ~~~~~~~~~~a~~~~~~~~~-~gkvvv  362 (364)
                      |++  +++++|++.+.++.. .+|+++
T Consensus       287 ~~~--~~~~~a~~~~~~~~~~~~~~~~  311 (312)
T cd08269         287 FPL--EELGDAFEAARRRPDGFIKGVI  311 (312)
T ss_pred             ecH--HHHHHHHHHHHhCCCCceEEEe
Confidence            888  999999999988844 689886

The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i

>cd08290 ETR 2-enoyl thioester reductase (ETR)

Probab=100.00  E-value=8.8e-35  Score=269.12  Aligned_cols=311  Identities=24%  Similarity=0.337  Sum_probs=244.5

Q ss_pred             ceeEEEecCC----ceEEEEecCCCCCC-CcEEEEEeeeeeCcccHhhhhhcccCCcc--CCCCcccccceeEEEEEeCC
Q 017916           18 NMAAWLLGVN----TLKIQPFELPSLGP-YDVLVRMKAVGICGSDVHYLKTLRCADFV--VKEPMVIGHECAGVIEKVGS   90 (364)
Q Consensus        18 ~~~~~~~~~~----~~~~~~~~~p~~~~-~~VlV~v~~~~l~~~d~~~~~g~~~~~~~--~~~p~~~G~e~~G~V~~vG~   90 (364)
                      |+++++..+.    .+++.+.|.|++.+ ++|+||+.++++|+.|+..+.|.......  ...|.++|+|++|+|+++|+
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~~~v~v~v~~~gi~~~d~~~~~g~~~~~~~~~~~~~~~~g~e~~G~V~~vG~   80 (341)
T cd08290           1 AKALVYTEHGEPKEVLQLESYEIPPPGPPNEVLVKMLAAPINPADINQIQGVYPIKPPTTPEPPAVGGNEGVGEVVKVGS   80 (341)
T ss_pred             CceEEEccCCCchhheEEeecCCCCCCCCCEEEEEEEecCCCHHHHHHhcCcCCCCCcccCCCCCCCCcceEEEEEEeCC
Confidence            5677777553    38999999998887 99999999999999999988775421100  12577999999999999999


Q ss_pred             CCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCccchhhhh-hhHH
Q 017916           91 EVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSV  169 (364)
Q Consensus        91 ~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~lP~~~~~~~aa~~~-~~~~  169 (364)
                      ++..|++||+|++...                           ..|+|++|+.++.++++++|+++++++++.+. .+.+
T Consensus        81 ~v~~~~~Gd~V~~~~~---------------------------~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~~~~~~~t  133 (341)
T cd08290          81 GVKSLKPGDWVIPLRP---------------------------GLGTWRTHAVVPADDLIKVPNDVDPEQAATLSVNPCT  133 (341)
T ss_pred             CCCCCCCCCEEEecCC---------------------------CCccchheEeccHHHeEeCCCCCCHHHHHHhhccHHH
Confidence            9999999999987521                           24899999999999999999999998888765 7889


Q ss_pred             HHHHHH-HcCCCCCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecCh----hHHHHHHHcCCCeEEecCCC-cccHHH
Q 017916          170 GLHACR-RANIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDD----YRLSVAKELGADNIVKVSTN-LQDIAE  242 (364)
Q Consensus       170 a~~~l~-~~~~~~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~----~~~~~~~~lg~~~~~~~~~~-~~~~~~  242 (364)
                      ||+++. ...+++|++|||+|+ |.+|++++|+|+++|+++++++ .++    ++.++++++|+++++++... ..++..
T Consensus       134 a~~~l~~~~~~~~g~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~  212 (341)
T cd08290         134 AYRLLEDFVKLQPGDWVIQNGANSAVGQAVIQLAKLLGIKTINVV-RDRPDLEELKERLKALGADHVLTEEELRSLLATE  212 (341)
T ss_pred             HHHHHHhhcccCCCCEEEEccchhHHHHHHHHHHHHcCCeEEEEE-cCCCcchhHHHHHHhcCCCEEEeCcccccccHHH
Confidence            999985 478899999999987 9999999999999999644444 444    67788889999988775331 015555


Q ss_pred             HHHHHHHHcCCCccEEEECCCCHHHHHHHHHhcccCCEEEEEcCCC-CCccccchhhhhcCcEEEeeccC----------
Q 017916          243 EVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGH-HEMTVPLTPAAVREVDVVGVFRY----------  311 (364)
Q Consensus       243 ~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~----------  311 (364)
                      .++.+.   ++++|++|||+|+ ......+++++++|+++.++... .....+......+++++.+....          
T Consensus       213 ~i~~~~---~~~~d~vld~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  288 (341)
T cd08290         213 LLKSAP---GGRPKLALNCVGG-KSATELARLLSPGGTMVTYGGMSGQPVTVPTSLLIFKDITLRGFWLTRWLKRANPEE  288 (341)
T ss_pred             HHHHHc---CCCceEEEECcCc-HhHHHHHHHhCCCCEEEEEeccCCCCcccCHHHHhhCCceEEEEecHHHHhhcCHHH
Confidence            555443   2279999999996 56678999999999999997432 22233444556788888876532          


Q ss_pred             -CCcHHHHHHHHHcCCCCCCCceEEEe---eCChhhHHHHHHHHhcCCCceEEEEeC
Q 017916          312 -KNTWPLCLELLRSGKIDVKPLVTHRF---GFSQKEVEEAFETSARGGTAIKVMFNL  364 (364)
Q Consensus       312 -~~~~~~~~~~l~~g~~~~~~~~~~~~---~~~~~~~~~a~~~~~~~~~~gkvvv~~  364 (364)
                       ...+.++++++.++++.  +.....+   ++  +++++|++.+.++...||+++++
T Consensus       289 ~~~~~~~~~~~~~~~~l~--~~~~~~~~~~~~--~~~~~a~~~~~~~~~~~k~v~~~  341 (341)
T cd08290         289 KEDMLEELAELIREGKLK--APPVEKVTDDPL--EEFKDALANALKGGGGGKQVLVM  341 (341)
T ss_pred             HHHHHHHHHHHHHcCCcc--CCcccccccCCH--HHHHHHHHHHhhcCCCCeEEEeC
Confidence             12577889999999984  4445556   77  99999999999999999999874

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann f

>PTZ00354 alcohol dehydrogenase; Provisional

Probab=100.00  E-value=2.8e-34  Score=264.80  Aligned_cols=309  Identities=23%  Similarity=0.328  Sum_probs=245.8

Q ss_pred             cceeEEEecCC---ceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCCCCC
Q 017916           17 VNMAAWLLGVN---TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVK   93 (364)
Q Consensus        17 ~~~~~~~~~~~---~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~   93 (364)
                      +|+|+++..+.   .+++.+.+.|++.+++|+|||.++++|+.|+....|....  ....|.++|+|++|+|+++|++++
T Consensus         1 ~m~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~--~~~~~~~~g~e~~G~v~~vG~~v~   78 (334)
T PTZ00354          1 MMRAVTLKGFGGVDVLKIGESPKPAPKRNDVLIKVSAAGVNRADTLQRQGKYPP--PPGSSEILGLEVAGYVEDVGSDVK   78 (334)
T ss_pred             CcEEEEEEecCCCcceEEEeCCCCCCCCCEEEEEEEEEecCHHHHHHhCCCCCC--CCCCCcccceeeEEEEEEeCCCCC
Confidence            47788877543   6777788888889999999999999999998887764321  134467899999999999999999


Q ss_pred             CCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCccchhhh-hhhHHHHH
Q 017916           94 TLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMC-EPLSVGLH  172 (364)
Q Consensus        94 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~lP~~~~~~~aa~~-~~~~~a~~  172 (364)
                      .+++||+|+++.                            .+|+|++|+.++.++++++|+++++.+++.+ ..+.+||+
T Consensus        79 ~~~~Gd~V~~~~----------------------------~~g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~ta~~  130 (334)
T PTZ00354         79 RFKEGDRVMALL----------------------------PGGGYAEYAVAHKGHVMHIPQGYTFEEAAAIPEAFLTAWQ  130 (334)
T ss_pred             CCCCCCEEEEec----------------------------CCCceeeEEEecHHHcEeCCCCCCHHHHHHHHHHHHHHHH
Confidence            999999998751                            3489999999999999999999998887755 48889999


Q ss_pred             HHHH-cCCCCCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHH
Q 017916          173 ACRR-ANIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKA  250 (364)
Q Consensus       173 ~l~~-~~~~~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~  250 (364)
                      ++.. .++++|++|||+|+ |++|++++++|+++|++. +.+..++++.+.++++|++.++++... .++.+.++...  
T Consensus       131 ~l~~~~~~~~~~~vlI~ga~g~~g~~~~~~a~~~g~~v-~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~~~~~~--  206 (334)
T PTZ00354        131 LLKKHGDVKKGQSVLIHAGASGVGTAAAQLAEKYGAAT-IITTSSEEKVDFCKKLAAIILIRYPDE-EGFAPKVKKLT--  206 (334)
T ss_pred             HHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEE-EEEeCCHHHHHHHHHcCCcEEEecCCh-hHHHHHHHHHh--
Confidence            9854 88999999999997 999999999999999964 456788888998899999877764321 12555565543  


Q ss_pred             cCCCccEEEECCCCHHHHHHHHHhcccCCEEEEEcCCCCC-cc-ccchhhhhcCcEEEeeccCC-----------CcHHH
Q 017916          251 MGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHE-MT-VPLTPAAVREVDVVGVFRYK-----------NTWPL  317 (364)
Q Consensus       251 ~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~-~~~~~~~~~~~~~~~~~~~~-----------~~~~~  317 (364)
                      .+.++|++||++| .+.+..++++|+++|+++.++..... .. +....+..+..++.+.....           +.+++
T Consensus       207 ~~~~~d~~i~~~~-~~~~~~~~~~l~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  285 (334)
T PTZ00354        207 GEKGVNLVLDCVG-GSYLSETAEVLAVDGKWIVYGFMGGAKVEKFNLLPLLRKRASIIFSTLRSRSDEYKADLVASFERE  285 (334)
T ss_pred             CCCCceEEEECCc-hHHHHHHHHHhccCCeEEEEecCCCCcccccCHHHHHhhCCEEEeeeccccchhhhHHHHHHHHHH
Confidence            2568999999998 67889999999999999999853322 12 44445556666777654321           23577


Q ss_pred             HHHHHHcCCCCCCCceEEEeeCChhhHHHHHHHHhcCCCceEEEEeC
Q 017916          318 CLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  364 (364)
Q Consensus       318 ~~~~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  364 (364)
                      ++++++++.+  .+.+.+.|++  ++++++++.+.++...||+++++
T Consensus       286 ~~~~~~~~~l--~~~~~~~~~~--~~~~~~~~~~~~~~~~~kvvv~~  328 (334)
T PTZ00354        286 VLPYMEEGEI--KPIVDRTYPL--EEVAEAHTFLEQNKNIGKVVLTV  328 (334)
T ss_pred             HHHHHHCCCc--cCccccEEcH--HHHHHHHHHHHhCCCCceEEEec
Confidence            8899999988  4456788888  99999999999888889999864

>cd08270 MDR4 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=2.2e-34  Score=262.24  Aligned_cols=292  Identities=25%  Similarity=0.307  Sum_probs=237.1

Q ss_pred             eeEEEec--CCceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCCCCCCCC
Q 017916           19 MAAWLLG--VNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLV   96 (364)
Q Consensus        19 ~~~~~~~--~~~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~   96 (364)
                      +++++.+  +..+++.+.+.|.+.++||+||+.++++|+.|+....+       ...|.++|+|++|+|+++|++++.|+
T Consensus         2 ~~~~~~~~~~~~~~~~~~~~p~~~~~ev~v~v~~~~i~~~d~~~~~~-------~~~~~~~g~e~~G~v~~~G~~v~~~~   74 (305)
T cd08270           2 RALVVDPDAPLRLRLGEVPDPQPAPHEALVRVAAISLNRGELKFAAE-------RPDGAVPGWDAAGVVERAAADGSGPA   74 (305)
T ss_pred             eEEEEccCCCceeEEEecCCCCCCCCEEEEEEEEEecCHHHHHhhcc-------CCCCCcccceeEEEEEEeCCCCCCCC
Confidence            4555554  56788889999999999999999999999999886542       12367899999999999999999999


Q ss_pred             CCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCccchhhhh-hhHHHHHHHH
Q 017916           97 PGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHACR  175 (364)
Q Consensus        97 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~lP~~~~~~~aa~~~-~~~~a~~~l~  175 (364)
                      +||+|++..                            ..|+|++|+.++.++++++|+++++++++.++ .+.+||+++.
T Consensus        75 ~Gd~V~~~~----------------------------~~g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~ta~~~~~  126 (305)
T cd08270          75 VGARVVGLG----------------------------AMGAWAELVAVPTGWLAVLPDGVSFAQAATLPVAGVTALRALR  126 (305)
T ss_pred             CCCEEEEec----------------------------CCcceeeEEEEchHHeEECCCCCCHHHHHHhHhHHHHHHHHHH
Confidence            999998751                            35999999999999999999999999888765 7889999986


Q ss_pred             HcCCCCCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcCCC
Q 017916          176 RANIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTG  254 (364)
Q Consensus       176 ~~~~~~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~  254 (364)
                      .....+|++|+|+|+ |++|++++++|+.+|+ .++.++.++++.+.++++|++..+....   +       +.   +++
T Consensus       127 ~~~~~~~~~vli~g~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~---~-------~~---~~~  192 (305)
T cd08270         127 RGGPLLGRRVLVTGASGGVGRFAVQLAALAGA-HVVAVVGSPARAEGLRELGAAEVVVGGS---E-------LS---GAP  192 (305)
T ss_pred             HhCCCCCCEEEEECCCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCcEEEeccc---c-------cc---CCC
Confidence            644446999999998 9999999999999999 5777778889999999999875543111   1       11   347


Q ss_pred             ccEEEECCCCHHHHHHHHHhcccCCEEEEEcCCCCC-ccccchhhhh--cCcEEEeeccC-----CCcHHHHHHHHHcCC
Q 017916          255 IDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHE-MTVPLTPAAV--REVDVVGVFRY-----KNTWPLCLELLRSGK  326 (364)
Q Consensus       255 ~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~--~~~~~~~~~~~-----~~~~~~~~~~l~~g~  326 (364)
                      +|+++|++|+ ......+++|+++|+++.+|..... ...+...+..  ++.++.+....     .+.++.+++++++++
T Consensus       193 ~d~vl~~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  271 (305)
T cd08270         193 VDLVVDSVGG-PQLARALELLAPGGTVVSVGSSSGEPAVFNPAAFVGGGGGRRLYTFFLYDGEPLAADLARLLGLVAAGR  271 (305)
T ss_pred             ceEEEECCCc-HHHHHHHHHhcCCCEEEEEeccCCCcccccHHHHhcccccceEEEEEccCHHHHHHHHHHHHHHHHCCC
Confidence            9999999995 5788999999999999999854321 2233333433  57777776543     456888999999999


Q ss_pred             CCCCCceEEEeeCChhhHHHHHHHHhcCCCceEEEEeC
Q 017916          327 IDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  364 (364)
Q Consensus       327 ~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  364 (364)
                      +.  +.+.+.+++  +++++|++.+.++...||+++++
T Consensus       272 i~--~~~~~~~~~--~~~~~a~~~~~~~~~~gkvvi~~  305 (305)
T cd08270         272 LD--PRIGWRGSW--TEIDEAAEALLARRFRGKAVLDV  305 (305)
T ss_pred             cc--ceeccEEcH--HHHHHHHHHHHcCCCCceEEEeC
Confidence            94  446778888  99999999999999999999875

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]

Probab=100.00  E-value=2.7e-35  Score=267.79  Aligned_cols=299  Identities=28%  Similarity=0.399  Sum_probs=226.8

Q ss_pred             CceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCcc-CCCCcccccceeEE---EEEeC-CCCCCCCCCCEE
Q 017916           27 NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFV-VKEPMVIGHECAGV---IEKVG-SEVKTLVPGDRV  101 (364)
Q Consensus        27 ~~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~-~~~p~~~G~e~~G~---V~~vG-~~v~~~~~Gd~V  101 (364)
                      ......+.++|.+.+++++|++.++++||.|+.+..|.++.... ..+|.+.+.++.|+   +...| ..+..+..||.+
T Consensus        18 ~~~~~~~~~iP~~~~~~~~i~~~a~a~NpiD~~~~~g~~~~~~~~~~~p~ii~~~g~~~~~~~~~~g~~~~~~~~~g~~~   97 (347)
T KOG1198|consen   18 EVLFSEEVPIPEPEDGEVLIKVVAVALNPIDLKIRNGYYSPIPLGREFPGIIGRDGSGVVGAVESVGDDVVGGWVHGDAV   97 (347)
T ss_pred             ceEEeecccCCCCCCCceEEEEEEeccChHHHHHHccCcCCCCCccCCCCccccccCCceeEEeccccccccceEeeeEE
Confidence            45556689999999999999999999999999999987654421 25665555555554   33444 333446666665


Q ss_pred             EEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCccchhhhh-hhHHHHHHHH-Hc--
Q 017916          102 ALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHACR-RA--  177 (364)
Q Consensus       102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~lP~~~~~~~aa~~~-~~~~a~~~l~-~~--  177 (364)
                      ...                            ...|+|+||+++|+..++++|+++++.+||+++ .+.+||.++. ..  
T Consensus        98 ~~~----------------------------~~~g~~aey~v~p~~~~~~~P~~l~~~~aa~~p~~~~tA~~al~~~~~~  149 (347)
T KOG1198|consen   98 VAF----------------------------LSSGGLAEYVVVPEKLLVKIPESLSFEEAAALPLAALTALSALFQLAPG  149 (347)
T ss_pred             eec----------------------------cCCCceeeEEEcchhhccCCCCccChhhhhcCchHHHHHHHHHHhcccc
Confidence            532                            467999999999999999999999999999776 8999999995 47  


Q ss_pred             ----CCCCCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcC
Q 017916          178 ----NIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMG  252 (364)
Q Consensus       178 ----~~~~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~  252 (364)
                          ++++|++|||+|+ |++|++++|+|+..|+ ..+++.+++++.+++++||+++++||+.  +++.+.++..+   +
T Consensus       150 ~~~~~~~~g~~vLv~ggsggVG~~aiQlAk~~~~-~~v~t~~s~e~~~l~k~lGAd~vvdy~~--~~~~e~~kk~~---~  223 (347)
T KOG1198|consen  150 KRSKKLSKGKSVLVLGGSGGVGTAAIQLAKHAGA-IKVVTACSKEKLELVKKLGADEVVDYKD--ENVVELIKKYT---G  223 (347)
T ss_pred             ccccccCCCCeEEEEeCCcHHHHHHHHHHHhcCC-cEEEEEcccchHHHHHHcCCcEeecCCC--HHHHHHHHhhc---C
Confidence                7999999999987 9999999999999996 3566668999999999999999999876  66766665543   6


Q ss_pred             CCccEEEECCCCHHHHHHHHHhcccCCEEEEEcCCCC-Cccccchhhh--hc----------CcEEEe--eccCCCcHHH
Q 017916          253 TGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHH-EMTVPLTPAA--VR----------EVDVVG--VFRYKNTWPL  317 (364)
Q Consensus       253 ~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~--~~----------~~~~~~--~~~~~~~~~~  317 (364)
                      .++|+||||+|.. .......++...|+...++.... ..+.......  .+          ......  .....+.++.
T Consensus       224 ~~~DvVlD~vg~~-~~~~~~~~l~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  302 (347)
T KOG1198|consen  224 KGVDVVLDCVGGS-TLTKSLSCLLKGGGGAYIGLVGDELANYKLDDLWQSANGIKLYSLGLKGVNYRWLYFVPSAEYLKA  302 (347)
T ss_pred             CCccEEEECCCCC-ccccchhhhccCCceEEEEeccccccccccccchhhhhhhhheeeeeeccceeeeeecCCHHHHHH
Confidence            7999999999953 66677778877776444442111 1111111000  11          111111  1112667899


Q ss_pred             HHHHHHcCCCCCCCceEEEeeCChhhHHHHHHHHhcCCCceEEEEeC
Q 017916          318 CLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  364 (364)
Q Consensus       318 ~~~~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  364 (364)
                      +.++++.+++  +|.+.+.|++  +++.+|++.+.++...||+++.+
T Consensus       303 l~~~ie~gki--kp~i~~~~p~--~~~~ea~~~~~~~~~~GK~vl~~  345 (347)
T KOG1198|consen  303 LVELIEKGKI--KPVIDSVYPF--SQAKEAFEKLEKSHATGKVVLEK  345 (347)
T ss_pred             HHHHHHcCcc--cCCcceeeeH--HHHHHHHHHHhhcCCcceEEEEe
Confidence            9999999987  8999999999  99999999999999999999864

>cd08276 MDR7 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=9.6e-34  Score=261.41  Aligned_cols=329  Identities=27%  Similarity=0.375  Sum_probs=261.0

Q ss_pred             ceeEEEe---cCCceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCCCCCC
Q 017916           18 NMAAWLL---GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT   94 (364)
Q Consensus        18 ~~~~~~~---~~~~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~   94 (364)
                      |+|+++.   ..+.+++.+.+.|.+.+++++|++.++++|+.|+....|.+...  ...|.++|+|++|+|+.+|+++++
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~--~~~~~~~g~e~~G~v~~~G~~~~~   78 (336)
T cd08276           1 MKAWRLSGGGGLDNLKLVEEPVPEPGPGEVLVRVHAVSLNYRDLLILNGRYPPP--VKDPLIPLSDGAGEVVAVGEGVTR   78 (336)
T ss_pred             CeEEEEeccCCCcceEEEeccCCCCCCCeEEEEEEEEecCHHHHHHhcCCCCCC--CCCCcccccceeEEEEEeCCCCcC
Confidence            4566666   34678888888888899999999999999999999887654322  246889999999999999999999


Q ss_pred             CCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCccchhhhh-hhHHHHHH
Q 017916           95 LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHA  173 (364)
Q Consensus        95 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~lP~~~~~~~aa~~~-~~~~a~~~  173 (364)
                      +++||+|++.....|..+.+|......      ..+ ...+|+|++|+.++.++++++|+++++.+++.+. .+.+||++
T Consensus        79 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~------~~~-~~~~g~~~~~~~~~~~~~~~lp~~~~~~~a~~~~~~~~~a~~~  151 (336)
T cd08276          79 FKVGDRVVPTFFPNWLDGPPTAEDEAS------ALG-GPIDGVLAEYVVLPEEGLVRAPDHLSFEEAATLPCAGLTAWNA  151 (336)
T ss_pred             CCCCCEEEEeccccccccccccccccc------ccc-cccCceeeeEEEecHHHeEECCCCCCHHHhhhhhHHHHHHHHH
Confidence            999999999876666555544332221      111 2347899999999999999999999988887665 78889999


Q ss_pred             HH-HcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcC
Q 017916          174 CR-RANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMG  252 (364)
Q Consensus       174 l~-~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~  252 (364)
                      +. .+.+++|++|+|+|+|++|++++++|++.|++ ++.++.++++.+.++++|.+.+++... ..++.+.++...  .+
T Consensus       152 l~~~~~~~~g~~vli~g~g~~g~~~~~~a~~~G~~-v~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~~~~~~--~~  227 (336)
T cd08276         152 LFGLGPLKPGDTVLVQGTGGVSLFALQFAKAAGAR-VIATSSSDEKLERAKALGADHVINYRT-TPDWGEEVLKLT--GG  227 (336)
T ss_pred             HHhhcCCCCCCEEEEECCcHHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHcCCCEEEcCCc-ccCHHHHHHHHc--CC
Confidence            84 57899999999997799999999999999995 777778888889888899888776432 145666665553  24


Q ss_pred             CCccEEEECCCCHHHHHHHHHhcccCCEEEEEcCCCCC-ccccchhhhhcCcEEEeeccC-CCcHHHHHHHHHcCCCCCC
Q 017916          253 TGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHE-MTVPLTPAAVREVDVVGVFRY-KNTWPLCLELLRSGKIDVK  330 (364)
Q Consensus       253 ~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~g~~~~~  330 (364)
                      .++|++||+++ ......++++++++|+++.+|..... ........+.+++++.+.... ...+.+++++++++.+  .
T Consensus       228 ~~~d~~i~~~~-~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l--~  304 (336)
T cd08276         228 RGVDHVVEVGG-PGTLAQSIKAVAPGGVISLIGFLSGFEAPVLLLPLLTKGATLRGIAVGSRAQFEAMNRAIEAHRI--R  304 (336)
T ss_pred             CCCcEEEECCC-hHHHHHHHHhhcCCCEEEEEccCCCCccCcCHHHHhhcceEEEEEecCcHHHHHHHHHHHHcCCc--c
Confidence            68999999998 67888999999999999999854332 223344566788888887644 5678889999998887  3


Q ss_pred             CceEEEeeCChhhHHHHHHHHhcCCCceEEEEeC
Q 017916          331 PLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  364 (364)
Q Consensus       331 ~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  364 (364)
                      +...+.|++  ++++++++.+.++...+|+++++
T Consensus       305 ~~~~~~~~~--~~~~~a~~~~~~~~~~~kvv~~~  336 (336)
T cd08276         305 PVIDRVFPF--EEAKEAYRYLESGSHFGKVVIRV  336 (336)
T ss_pred             cccCcEEeH--HHHHHHHHHHHhCCCCceEEEeC
Confidence            445678888  99999999999888899999874

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>PRK10754 quinone oxidoreductase, NADPH-dependent; Provisional

Probab=100.00  E-value=2.9e-34  Score=264.12  Aligned_cols=308  Identities=25%  Similarity=0.287  Sum_probs=241.5

Q ss_pred             ceeEEEe---cCCceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCCCCCC
Q 017916           18 NMAAWLL---GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT   94 (364)
Q Consensus        18 ~~~~~~~---~~~~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~   94 (364)
                      |+++.+.   ++..+++.+.+.|.++++||+|||.++++|+.|+....|.+..   ...|.++|+|++|+|+.+|++++.
T Consensus         2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~i~v~~~gi~~~d~~~~~g~~~~---~~~~~~~g~e~~G~v~~vG~~v~~   78 (327)
T PRK10754          2 AKRIEFHKHGGPEVLQAVEFTPADPAENEVQVENKAIGINYIDTYIRSGLYPP---PSLPSGLGTEAAGVVSKVGSGVKH   78 (327)
T ss_pred             ceEEEEeccCChhHeEEeeccCCCCCCCEEEEEEEEEEcCHHHhhhcCCCCCC---CCCCCccCcceEEEEEEeCCCCCC
Confidence            5566655   3468999999999999999999999999999999887764421   245789999999999999999999


Q ss_pred             CCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCccchhhhh-hhHHHHHH
Q 017916           95 LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHA  173 (364)
Q Consensus        95 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~lP~~~~~~~aa~~~-~~~~a~~~  173 (364)
                      +++||+|+...                           ...|+|++|+.++.++++++|+++++++++.+. .+.+||.+
T Consensus        79 ~~~Gd~V~~~~---------------------------~~~g~~~~~v~v~~~~~~~lp~~~~~~~~~~~~~~~~ta~~~  131 (327)
T PRK10754         79 IKVGDRVVYAQ---------------------------SALGAYSSVHNVPADKAAILPDAISFEQAAASFLKGLTVYYL  131 (327)
T ss_pred             CCCCCEEEECC---------------------------CCCcceeeEEEcCHHHceeCCCCCCHHHHHHHHHHHHHHHHH
Confidence            99999997531                           134899999999999999999999998887654 77788888


Q ss_pred             HH-HcCCCCCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHc
Q 017916          174 CR-RANIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAM  251 (364)
Q Consensus       174 l~-~~~~~~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~  251 (364)
                      +. ..++++|++|+|+|+ |.+|++++++|+.+|++ +++++.++++.++++++|++++++.+  ..++.+.++.+.  .
T Consensus       132 l~~~~~~~~g~~vlI~g~~g~ig~~~~~lak~~G~~-v~~~~~~~~~~~~~~~~g~~~~~~~~--~~~~~~~~~~~~--~  206 (327)
T PRK10754        132 LRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGAK-LIGTVGSAQKAQRAKKAGAWQVINYR--EENIVERVKEIT--G  206 (327)
T ss_pred             HHhhcCCCCCCEEEEEeCCcHHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHCCCCEEEcCC--CCcHHHHHHHHc--C
Confidence            74 578999999999986 99999999999999995 67777888888999999998877643  356666666654  3


Q ss_pred             CCCccEEEECCCCHHHHHHHHHhcccCCEEEEEcCCCCC-ccccchhhhhcCcE------EEeeccC----CCcHHHHHH
Q 017916          252 GTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHE-MTVPLTPAAVREVD------VVGVFRY----KNTWPLCLE  320 (364)
Q Consensus       252 ~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~------~~~~~~~----~~~~~~~~~  320 (364)
                      ++++|++|||+| .......+++++++|+++.+|..... .......+..++..      +.+....    .+.+.++++
T Consensus       207 ~~~~d~vl~~~~-~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  285 (327)
T PRK10754        207 GKKVRVVYDSVG-KDTWEASLDCLQRRGLMVSFGNASGPVTGVNLGILNQKGSLYVTRPSLQGYITTREELTEASNELFS  285 (327)
T ss_pred             CCCeEEEEECCc-HHHHHHHHHHhccCCEEEEEccCCCCCCCcCHHHHhccCceEEecceeecccCCHHHHHHHHHHHHH
Confidence            568999999999 47788899999999999999854322 11222222222211      1111111    233567889


Q ss_pred             HHHcCCCCCCCceEEEeeCChhhHHHHHHHHhcCCCceEEEEe
Q 017916          321 LLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFN  363 (364)
Q Consensus       321 ~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~  363 (364)
                      ++.+|.+.+.....+.|++  +++.+|++.++++...||+|+.
T Consensus       286 ~l~~g~l~~~~~~~~~~~~--~~~~~a~~~~~~~~~~~~~~~~  326 (327)
T PRK10754        286 LIASGVIKVDVAEQQKFPL--KDAQRAHEILESRATQGSSLLI  326 (327)
T ss_pred             HHHCCCeeeecccCcEEcH--HHHHHHHHHHHcCCCcceEEEe
Confidence            9999998543345678888  9999999999999999999985

>cd08249 enoyl_reductase_like enoyl_reductase_like

Probab=100.00  E-value=3.3e-34  Score=264.95  Aligned_cols=313  Identities=26%  Similarity=0.320  Sum_probs=240.8

Q ss_pred             ceeEEEecC--CceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCCCCCCC
Q 017916           18 NMAAWLLGV--NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTL   95 (364)
Q Consensus        18 ~~~~~~~~~--~~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~   95 (364)
                      |+++++.++  ..+++.+.+.|+++++||+|||.++++|+.|+....+.+    ....|.++|+|++|+|+.+|++++.+
T Consensus         1 m~a~~~~~~~~~~~~~~~~~~p~~~~~ev~i~v~~~~i~~~d~~~~~~~~----~~~~~~~~g~e~~G~v~~vG~~v~~~   76 (339)
T cd08249           1 QKAAVLTGPGGGLLVVVDVPVPKPGPDEVLVKVKAVALNPVDWKHQDYGF----IPSYPAILGCDFAGTVVEVGSGVTRF   76 (339)
T ss_pred             CceEEeccCCCCcccccCCCCCCCCCCEEEEEEEEEEcCchheeeeeccc----ccCCCceeeeeeeEEEEEeCCCcCcC
Confidence            467788877  789999999999999999999999999999988765432    12357789999999999999999999


Q ss_pred             CCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCccchhhhh-hhHHHHHHH
Q 017916           96 VPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHAC  174 (364)
Q Consensus        96 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~lP~~~~~~~aa~~~-~~~~a~~~l  174 (364)
                      ++||+|++++...|.                    ....+|+|++|+.++.++++++|+++++.+++.++ .+.+||+++
T Consensus        77 ~~Gd~V~~~~~~~~~--------------------~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~l  136 (339)
T cd08249          77 KVGDRVAGFVHGGNP--------------------NDPRNGAFQEYVVADADLTAKIPDNISFEEAATLPVGLVTAALAL  136 (339)
T ss_pred             CCCCEEEEEeccccC--------------------CCCCCCcccceEEechhheEECCCCCCHHHceecchHHHHHHHHH
Confidence            999999987543221                    01246999999999999999999999999888776 888999998


Q ss_pred             H-HcCC----------CCCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHH
Q 017916          175 R-RANI----------GPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAE  242 (364)
Q Consensus       175 ~-~~~~----------~~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~  242 (364)
                      . ..++          +++++|||+|+ |.+|++++++|+++|++ ++++. ++++.++++++|+++++++.  ..++.+
T Consensus       137 ~~~~~~~~~~~~~~~~~~~~~vlI~ga~g~vg~~~~~~a~~~G~~-v~~~~-~~~~~~~~~~~g~~~v~~~~--~~~~~~  212 (339)
T cd08249         137 FQKLGLPLPPPKPSPASKGKPVLIWGGSSSVGTLAIQLAKLAGYK-VITTA-SPKNFDLVKSLGADAVFDYH--DPDVVE  212 (339)
T ss_pred             hccccCCCCCCCCCCCCCCCEEEEEcChhHHHHHHHHHHHHcCCe-EEEEE-CcccHHHHHhcCCCEEEECC--CchHHH
Confidence            4 3443          78999999998 99999999999999995 55555 55888888999998887753  356666


Q ss_pred             HHHHHHHHcCCCccEEEECCCCHHHHHHHHHhccc--CCEEEEEcCCCCCccccchhhhhcCcEEEeec--------cCC
Q 017916          243 EVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRA--GGKVCLVGMGHHEMTVPLTPAAVREVDVVGVF--------RYK  312 (364)
Q Consensus       243 ~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~--~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~--------~~~  312 (364)
                      .++.+.   ++++|++||++|+++.+...++++++  +|+++.++........ ........+......        ...
T Consensus       213 ~l~~~~---~~~~d~vl~~~g~~~~~~~~~~~l~~~~~g~~v~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~  288 (339)
T cd08249         213 DIRAAT---GGKLRYALDCISTPESAQLCAEALGRSGGGKLVSLLPVPEETEP-RKGVKVKFVLGYTVFGEIPEDREFGE  288 (339)
T ss_pred             HHHHhc---CCCeeEEEEeeccchHHHHHHHHHhccCCCEEEEecCCCccccC-CCCceEEEEEeeeecccccccccchH
Confidence            665543   46799999999965788999999999  9999999754332101 111111111111111        113


Q ss_pred             CcHHHHHHHHHcCCCCCCCceEEEeeCChhhHHHHHHHHhcCC-CceEEEEeC
Q 017916          313 NTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGG-TAIKVMFNL  364 (364)
Q Consensus       313 ~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~-~~gkvvv~~  364 (364)
                      ..++++.++++++.+.+  .....+++..+++++|++.+..+. ..+|+++++
T Consensus       289 ~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~~~a~~~~~~~~~~~~kvvv~~  339 (339)
T cd08249         289 VFWKYLPELLEEGKLKP--HPVRVVEGGLEGVQEGLDLLRKGKVSGEKLVVRL  339 (339)
T ss_pred             HHHHHHHHHHHcCCccC--CCceecCCcHHHHHHHHHHHHCCCccceEEEEeC
Confidence            45778999999998843  344556611299999999999998 899999975

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol de

>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members

Probab=100.00  E-value=2.1e-33  Score=258.64  Aligned_cols=305  Identities=23%  Similarity=0.270  Sum_probs=240.2

Q ss_pred             ceeEEEec-----CCceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCCCC
Q 017916           18 NMAAWLLG-----VNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEV   92 (364)
Q Consensus        18 ~~~~~~~~-----~~~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v   92 (364)
                      |+++++.+     ++.+++.+.+.|.+.+++|+|||.++++|+.|+....|.+...  ...|.++|+|++|+|+.+|+++
T Consensus         2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~i~v~~~gi~~~d~~~~~g~~~~~--~~~p~~~g~e~~G~v~~vG~~v   79 (329)
T cd08250           2 FRKLVVHRLSPNFREATSIVDVPVPLPGPGEVLVKNRFVGINASDINFTAGRYDPG--VKPPFDCGFEGVGEVVAVGEGV   79 (329)
T ss_pred             ceEEEeccCCCCcccCceEEecCCCCCCCCEEEEEEEEEecCHHHHHHHhCCCCCC--CCCCcccCceeEEEEEEECCCC
Confidence            56776663     3678899999999999999999999999999999877644221  3568899999999999999999


Q ss_pred             CCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCccchhhhhhhHHHHH
Q 017916           93 KTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLH  172 (364)
Q Consensus        93 ~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~lP~~~~~~~aa~~~~~~~a~~  172 (364)
                      +.+++||+|++.                             ..|+|++|+.++.++++++|++. .+.+++...+.+||+
T Consensus        80 ~~~~~Gd~V~~~-----------------------------~~g~~~s~~~v~~~~~~~ip~~~-~~~a~l~~~~~ta~~  129 (329)
T cd08250          80 TDFKVGDAVATM-----------------------------SFGAFAEYQVVPARHAVPVPELK-PEVLPLLVSGLTASI  129 (329)
T ss_pred             CCCCCCCEEEEe-----------------------------cCcceeEEEEechHHeEECCCCc-chhhhcccHHHHHHH
Confidence            999999999874                             34899999999999999999973 233444458889999


Q ss_pred             HHH-HcCCCCCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHH
Q 017916          173 ACR-RANIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKA  250 (364)
Q Consensus       173 ~l~-~~~~~~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~  250 (364)
                      ++. ..++++|++|+|+|+ |.+|++++++|+..|++ ++++++++++.+.++++|++.+++.+.  .++.+.+...   
T Consensus       130 ~l~~~~~~~~~~~vlI~ga~g~ig~~~~~~a~~~g~~-v~~~~~~~~~~~~~~~~g~~~v~~~~~--~~~~~~~~~~---  203 (329)
T cd08250         130 ALEEVGEMKSGETVLVTAAAGGTGQFAVQLAKLAGCH-VIGTCSSDEKAEFLKSLGCDRPINYKT--EDLGEVLKKE---  203 (329)
T ss_pred             HHHHhcCCCCCCEEEEEeCccHHHHHHHHHHHHcCCe-EEEEeCcHHHHHHHHHcCCceEEeCCC--ccHHHHHHHh---
Confidence            985 478999999999997 99999999999999995 677777888888889999877766433  4555555443   


Q ss_pred             cCCCccEEEECCCCHHHHHHHHHhcccCCEEEEEcCCCCC----------ccccchhhhhcCcEEEeeccC------CCc
Q 017916          251 MGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHE----------MTVPLTPAAVREVDVVGVFRY------KNT  314 (364)
Q Consensus       251 ~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~----------~~~~~~~~~~~~~~~~~~~~~------~~~  314 (364)
                      .++++|++||++| .......+++++++|+++.+|.....          ..........+++++.+....      .+.
T Consensus       204 ~~~~vd~v~~~~g-~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  282 (329)
T cd08250         204 YPKGVDVVYESVG-GEMFDTCVDNLALKGRLIVIGFISGYQSGTGPSPVKGATLPPKLLAKSASVRGFFLPHYAKLIPQH  282 (329)
T ss_pred             cCCCCeEEEECCc-HHHHHHHHHHhccCCeEEEEecccCCcccCcccccccccccHHHhhcCceEEEEEhHHHHHHHHHH
Confidence            2467999999999 57889999999999999999853221          001112345677777776432      345


Q ss_pred             HHHHHHHHHcCCCCCCCceEEEeeCChhhHHHHHHHHhcCCCceEEEEe
Q 017916          315 WPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFN  363 (364)
Q Consensus       315 ~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~  363 (364)
                      +.+++++++++.+.........|++  +++++|++.+.++...||++++
T Consensus       283 ~~~~~~~~~~~~l~~~~~~~~~~~~--~~~~~a~~~~~~~~~~~kvvv~  329 (329)
T cd08250         283 LDRLLQLYQRGKLVCEVDPTRFRGL--ESVADAVDYLYSGKNIGKVVVE  329 (329)
T ss_pred             HHHHHHHHHCCCeeeeECCccccCH--HHHHHHHHHHHcCCCCceEEeC
Confidence            7888999999988432223455778  9999999999998888999874

Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>cd05280 MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone oxidoreductases

Probab=100.00  E-value=2.2e-33  Score=258.00  Aligned_cols=308  Identities=20%  Similarity=0.266  Sum_probs=235.8

Q ss_pred             ceeEEEecCC---ceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCCCCCC
Q 017916           18 NMAAWLLGVN---TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT   94 (364)
Q Consensus        18 ~~~~~~~~~~---~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~   94 (364)
                      |+++++.++.   .+++.+.|.|.+++++|+|||.++++|+.|+..+.|.+.  ....+|.++|+|++|+|+++  +++.
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~--~~~~~~~~~g~e~~G~v~~~--~~~~   76 (325)
T cd05280           1 FKALVVEEQDGGVSLFLRTLPLDDLPEGDVLIRVHYSSLNYKDALAATGNGG--VTRNYPHTPGIDAAGTVVSS--DDPR   76 (325)
T ss_pred             CceEEEcccCCCCcceEEeCCCCCCCCCeEEEEEEEeecChHHHHHhcCCCC--CCCCCCCccCcccEEEEEEe--CCCC
Confidence            4677777554   899999999999999999999999999999998877532  12345789999999999998  4578


Q ss_pred             CCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCccchhhhh-hhHHHHHH
Q 017916           95 LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHA  173 (364)
Q Consensus        95 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~lP~~~~~~~aa~~~-~~~~a~~~  173 (364)
                      |++||+|++.+..                     .+ ...+|+|++|+.+++++++++|+++++++|+.+. .+.+++.+
T Consensus        77 ~~~Gd~V~~~~~~---------------------~g-~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~~~~~~~ta~~~  134 (325)
T cd05280          77 FREGDEVLVTGYD---------------------LG-MNTDGGFAEYVRVPADWVVPLPEGLSLREAMILGTAGFTAALS  134 (325)
T ss_pred             CCCCCEEEEcccc---------------------cC-CCCCceeEEEEEEchhhEEECCCCCCHHHHHhhHHHHHHHHHH
Confidence            9999999975210                     00 1246899999999999999999999999988665 77788888


Q ss_pred             HHH---cCCC-CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHH
Q 017916          174 CRR---ANIG-PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQ  248 (364)
Q Consensus       174 l~~---~~~~-~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~  248 (364)
                      ++.   ..++ .+++|||+|+ |.+|++++|+|+++|++ +++++.++++.++++++|++++++.+.    ........ 
T Consensus       135 l~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~~a~~~g~~-v~~~~~~~~~~~~~~~~g~~~~~~~~~----~~~~~~~~-  208 (325)
T cd05280         135 VHRLEDNGQTPEDGPVLVTGATGGVGSIAVAILAKLGYT-VVALTGKEEQADYLKSLGASEVLDRED----LLDESKKP-  208 (325)
T ss_pred             HHHHhhccCCCCCCEEEEECCccHHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHhcCCcEEEcchh----HHHHHHHH-
Confidence            743   3345 3579999998 99999999999999995 777778899999999999988776432    11112222 


Q ss_pred             HHcCCCccEEEECCCCHHHHHHHHHhcccCCEEEEEcCCCC-CccccchhhhhcCcEEEeeccC-------CCcHHHHHH
Q 017916          249 KAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHH-EMTVPLTPAAVREVDVVGVFRY-------KNTWPLCLE  320 (364)
Q Consensus       249 ~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~  320 (364)
                       ..++++|++||++|+ ..+...+++++++|+++.+|.... +.......+..+++++.+....       .+.++.+.+
T Consensus       209 -~~~~~~d~vi~~~~~-~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  286 (325)
T cd05280         209 -LLKARWAGAIDTVGG-DVLANLLKQTKYGGVVASCGNAAGPELTTTVLPFILRGVSLLGIDSVNCPMELRKQVWQKLAT  286 (325)
T ss_pred             -hcCCCccEEEECCch-HHHHHHHHhhcCCCEEEEEecCCCCccccccchheeeeeEEEEEEeecCchhHHHHHHHHHHH
Confidence             224579999999995 788999999999999999985432 2233334444678887775432       123344555


Q ss_pred             HHHcCCCCCCCceEEEeeCChhhHHHHHHHHhcCCCceEEEEeC
Q 017916          321 LLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  364 (364)
Q Consensus       321 ~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  364 (364)
                      ++..+.   .+.+..+|++  +++++|++.+.++...||+++++
T Consensus       287 ~~~~~~---~~~~~~~~~~--~~~~~a~~~~~~~~~~gk~vv~~  325 (325)
T cd05280         287 EWKPDL---LEIVVREISL--EELPEAIDRLLAGKHRGRTVVKI  325 (325)
T ss_pred             HHhcCC---ccceeeEecH--HHHHHHHHHHhcCCcceEEEEeC
Confidence            555663   3346788899  99999999999999999999875

Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and so

>cd05282 ETR_like 2-enoyl thioester reductase-like

Probab=100.00  E-value=1.3e-33  Score=259.27  Aligned_cols=296  Identities=27%  Similarity=0.376  Sum_probs=239.6

Q ss_pred             ceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCCCCCCCCCCCEEEEcCCc
Q 017916           28 TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGI  107 (364)
Q Consensus        28 ~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~  107 (364)
                      .+++.+.+.|.+.+++|+|||.++++|+.|...+.+.+..  ....|.++|+|++|+|+.+|++++.+++||+|++.+  
T Consensus        13 ~~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~~~~~~--~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~--   88 (323)
T cd05282          13 VLELVSLPIPPPGPGEVLVRMLAAPINPSDLITISGAYGS--RPPLPAVPGNEGVGVVVEVGSGVSGLLVGQRVLPLG--   88 (323)
T ss_pred             eEEeEeCCCCCCCCCeEEEEEEeccCCHHHHHHhcCcCCC--CCCCCCcCCcceEEEEEEeCCCCCCCCCCCEEEEeC--
Confidence            6778888889999999999999999999999887765422  234578999999999999999999999999999752  


Q ss_pred             CCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCccchhhhh-hhHHHHHHHH-HcCCCCCCEE
Q 017916          108 SCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHACR-RANIGPETNV  185 (364)
Q Consensus       108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~lP~~~~~~~aa~~~-~~~~a~~~l~-~~~~~~g~~V  185 (364)
                                                ..|+|++|+.++.+.++++|+++++.+++.+. .+.+||+++. ...+.+|++|
T Consensus        89 --------------------------~~g~~~~~~~~~~~~~~~lp~~~~~~~~a~~~~~~~ta~~~~~~~~~~~~~~~v  142 (323)
T cd05282          89 --------------------------GEGTWQEYVVAPADDLIPVPDSISDEQAAMLYINPLTAWLMLTEYLKLPPGDWV  142 (323)
T ss_pred             --------------------------CCCcceeEEecCHHHeEECCCCCCHHHHHHHhccHHHHHHHHHHhccCCCCCEE
Confidence                                      14899999999999999999999988877654 7788998874 4778999999


Q ss_pred             EEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcCCCccEEEECCCC
Q 017916          186 LIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGF  264 (364)
Q Consensus       186 LI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid~~g~  264 (364)
                      ||+|+ |.+|++++++|+++|++ ++++..++++.+.++++|++.++++..  .++...++...  .+.++|++|||+|+
T Consensus       143 lI~g~~~~vg~~~~~~a~~~g~~-v~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~~~~~~~--~~~~~d~vl~~~g~  217 (323)
T cd05282         143 IQNAANSAVGRMLIQLAKLLGFK-TINVVRRDEQVEELKALGADEVIDSSP--EDLAQRVKEAT--GGAGARLALDAVGG  217 (323)
T ss_pred             EEcccccHHHHHHHHHHHHCCCe-EEEEecChHHHHHHHhcCCCEEecccc--hhHHHHHHHHh--cCCCceEEEECCCC
Confidence            99988 99999999999999995 666667888888889999988777532  34555555442  35689999999996


Q ss_pred             HHHHHHHHHhcccCCEEEEEcCCCCC-ccccchhhhhcCcEEEeeccC-----------CCcHHHHHHHHHcCCCCCCCc
Q 017916          265 NKTMSTALSATRAGGKVCLVGMGHHE-MTVPLTPAAVREVDVVGVFRY-----------KNTWPLCLELLRSGKIDVKPL  332 (364)
Q Consensus       265 ~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~l~~g~~~~~~~  332 (364)
                       ......+++++++|+++.+|..... ...+...+..+++++.+....           .+.++++++++.++++  .+.
T Consensus       218 -~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l--~~~  294 (323)
T cd05282         218 -ESATRLARSLRPGGTLVNYGLLSGEPVPFPRSVFIFKDITVRGFWLRQWLHSATKEAKQETFAEVIKLVEAGVL--TTP  294 (323)
T ss_pred             -HHHHHHHHhhCCCCEEEEEccCCCCCCCCCHHHHhhcCceEEEEEehHhhccCCHHHHHHHHHHHHHHHhCCCc--ccC
Confidence             4567889999999999999854332 233333444478887776533           2357889999999998  444


Q ss_pred             eEEEeeCChhhHHHHHHHHhcCCCceEEEEe
Q 017916          333 VTHRFGFSQKEVEEAFETSARGGTAIKVMFN  363 (364)
Q Consensus       333 ~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~  363 (364)
                      +.+.|++  +++++|++.+.++...||++++
T Consensus       295 ~~~~~~~--~~~~~a~~~~~~~~~~~kvv~~  323 (323)
T cd05282         295 VGAKFPL--EDFEEAVAAAEQPGRGGKVLLT  323 (323)
T ss_pred             ccceecH--HHHHHHHHHHhcCCCCceEeeC
Confidence            6788888  9999999999998888999875

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman

>TIGR02823 oxido_YhdH putative quinone oxidoreductase, YhdH/YhfP family

Probab=100.00  E-value=4.4e-33  Score=255.81  Aligned_cols=305  Identities=21%  Similarity=0.294  Sum_probs=233.6

Q ss_pred             eEEEe---cCCceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCCCCCCCC
Q 017916           20 AAWLL---GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLV   96 (364)
Q Consensus        20 ~~~~~---~~~~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~   96 (364)
                      |+++.   +++.+++++.|.|.+++++|+|||.++++|+.|+....|.+.  .....|.++|+|++|+|+.  .+++.|+
T Consensus         2 a~~~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~--~~~~~~~~~g~e~~G~V~~--~~~~~~~   77 (323)
T TIGR02823         2 ALVVEKEDGKVSAQVETLDLSDLPEGDVLIKVAYSSLNYKDALAITGKGG--VVRSYPMIPGIDAAGTVVS--SEDPRFR   77 (323)
T ss_pred             eEEEccCCCCcceeEeecCCCCCCCCeEEEEEEEEEcCHHHHHHHcCCCC--CCCCCCccceeeeEEEEEe--cCCCCCC
Confidence            44544   456889999999999999999999999999999988877542  1134588999999999988  5667899


Q ss_pred             CCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCccchhhhh-hhHHHHHHHH
Q 017916           97 PGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHACR  175 (364)
Q Consensus        97 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~lP~~~~~~~aa~~~-~~~~a~~~l~  175 (364)
                      +||+|++.+...                      ..+.+|+|++|+.++.++++++|+++++.+++.++ .+.+|+.+++
T Consensus        78 ~Gd~V~~~~~~~----------------------~~~~~g~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~~~  135 (323)
T TIGR02823        78 EGDEVIVTGYGL----------------------GVSHDGGYSQYARVPADWLVPLPEGLSLREAMALGTAGFTAALSVM  135 (323)
T ss_pred             CCCEEEEccCCC----------------------CCCCCccceEEEEEchhheEECCCCCCHHHhhhhhhhHHHHHHHHH
Confidence            999999753110                      01246899999999999999999999998888765 6677776663


Q ss_pred             ---HcCCCCCC-EEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHH
Q 017916          176 ---RANIGPET-NVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKA  250 (364)
Q Consensus       176 ---~~~~~~g~-~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~  250 (364)
                         .+.+++|+ +|||+|+ |.+|++++++|+++|++ +++++.++++.+.++++|++.+++.+.  .+  ..++.+   
T Consensus       136 ~~~~~~~~~~~~~vlI~g~~g~vg~~~~~la~~~G~~-vi~~~~~~~~~~~~~~~g~~~~~~~~~--~~--~~~~~~---  207 (323)
T TIGR02823       136 ALERNGLTPEDGPVLVTGATGGVGSLAVAILSKLGYE-VVASTGKAEEEDYLKELGASEVIDRED--LS--PPGKPL---  207 (323)
T ss_pred             HhhhcCCCCCCceEEEEcCCcHHHHHHHHHHHHcCCe-EEEEeCCHHHHHHHHhcCCcEEEcccc--HH--HHHHHh---
Confidence               34588998 9999998 99999999999999995 555556777778889999987776422  11  123333   


Q ss_pred             cCCCccEEEECCCCHHHHHHHHHhcccCCEEEEEcCCCC-CccccchhhhhcCcEEEeeccC-------CCcHHHHHHHH
Q 017916          251 MGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHH-EMTVPLTPAAVREVDVVGVFRY-------KNTWPLCLELL  322 (364)
Q Consensus       251 ~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~l  322 (364)
                      .+.++|+++||+| .+.+..++++++++|+++.+|.... ........++.+++++.+....       ...+.++.+++
T Consensus       208 ~~~~~d~vld~~g-~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  286 (323)
T TIGR02823       208 EKERWAGAVDTVG-GHTLANVLAQLKYGGAVAACGLAGGPDLPTTVLPFILRGVSLLGIDSVYCPMALREAAWQRLATDL  286 (323)
T ss_pred             cCCCceEEEECcc-HHHHHHHHHHhCCCCEEEEEcccCCCCccccHHHHhhcceEEEEEeccccCchhHHHHHHHHHHHh
Confidence            2345999999999 4678899999999999999985432 2222334455778888875432       12356666777


Q ss_pred             HcCCCCCCCceEEEeeCChhhHHHHHHHHhcCCCceEEEEeC
Q 017916          323 RSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  364 (364)
Q Consensus       323 ~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  364 (364)
                      ..+.+  .+. ...|++  +++++|++.+.++...||+++++
T Consensus       287 ~~~~~--~~~-~~~~~l--~~~~~a~~~~~~~~~~~k~vv~~  323 (323)
T TIGR02823       287 KPRNL--ESI-TREITL--EELPEALEQILAGQHRGRTVVDV  323 (323)
T ss_pred             hcCCC--cCc-eeeecH--HHHHHHHHHHhCCCccceEEEeC
Confidence            77776  333 467888  99999999999999999999874

This model represents a subfamily of pfam00107 as defined by Pfam, a superfamily in which some members are zinc-binding medium-chain alcohol dehydrogenases while others are quinone oxidoreductases with no bound zinc. This subfamily includes proteins studied crystallographically for insight into function: YhdH from Escherichia coli and YhfP from Bacillus subtilis. Members bind NADPH or NAD, but not zinc.

>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR)

Probab=100.00  E-value=6.5e-33  Score=254.04  Aligned_cols=305  Identities=25%  Similarity=0.333  Sum_probs=238.8

Q ss_pred             ceeEEEecC---CceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCCCCCC
Q 017916           18 NMAAWLLGV---NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT   94 (364)
Q Consensus        18 ~~~~~~~~~---~~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~   94 (364)
                      |+++.+..+   ..+++.+.+.|.+.++||+|||.++++|+.|+....|...   ....|.++|+|++|+|+++|.  ..
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~---~~~~~~~~g~e~~G~v~~vG~--~~   75 (320)
T cd08243           1 MKAIVIEQPGGPEVLKLREIPIPEPKPGWVLIRVKAFGLNRSEIFTRQGHSP---SVKFPRVLGIEAVGEVEEAPG--GT   75 (320)
T ss_pred             CeEEEEcCCCCccceEEeecCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCC---CCCCCccccceeEEEEEEecC--CC
Confidence            355665533   4677778888888999999999999999999988876432   134578999999999999995  57


Q ss_pred             CCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCccchhhhh-hhHHHHHH
Q 017916           95 LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHA  173 (364)
Q Consensus        95 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~lP~~~~~~~aa~~~-~~~~a~~~  173 (364)
                      +++||+|++.....                      ....+|+|++|+.+++++++++|+++++++++.+. ++.+||++
T Consensus        76 ~~~Gd~V~~~~~~~----------------------~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~  133 (320)
T cd08243          76 FTPGQRVATAMGGM----------------------GRTFDGSYAEYTLVPNEQVYAIDSDLSWAELAALPETYYTAWGS  133 (320)
T ss_pred             CCCCCEEEEecCCC----------------------CCCCCcccceEEEcCHHHcEeCCCCCCHHHHHhcchHHHHHHHH
Confidence            99999999863211                      01246999999999999999999999988877654 88999999


Q ss_pred             HHH-cCCCCCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHc
Q 017916          174 CRR-ANIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAM  251 (364)
Q Consensus       174 l~~-~~~~~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~  251 (364)
                      +.. ..+++|++|||+|+ |.+|++++|+|+.+|++ ++.++.++++.+.++++|++.++..   ..++.+.++.+    
T Consensus       134 l~~~~~~~~g~~vlV~ga~g~~g~~~~~~a~~~g~~-v~~~~~~~~~~~~~~~~g~~~~~~~---~~~~~~~i~~~----  205 (320)
T cd08243         134 LFRSLGLQPGDTLLIRGGTSSVGLAALKLAKALGAT-VTATTRSPERAALLKELGADEVVID---DGAIAEQLRAA----  205 (320)
T ss_pred             HHHhcCCCCCCEEEEEcCCChHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHhcCCcEEEec---CccHHHHHHHh----
Confidence            854 67899999999998 99999999999999995 6777778888999999999877642   34666666554    


Q ss_pred             CCCccEEEECCCCHHHHHHHHHhcccCCEEEEEcCCCCCcc---ccchhh--hhcCcEEEeeccC---CCcHHHHHHHHH
Q 017916          252 GTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMT---VPLTPA--AVREVDVVGVFRY---KNTWPLCLELLR  323 (364)
Q Consensus       252 ~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~---~~~~~~--~~~~~~~~~~~~~---~~~~~~~~~~l~  323 (364)
                      ++++|++||++|+ ..+...+++++++|+++.+|.......   ......  ..+++.+.+....   ...+++++++++
T Consensus       206 ~~~~d~vl~~~~~-~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  284 (320)
T cd08243         206 PGGFDKVLELVGT-ATLKDSLRHLRPGGIVCMTGLLGGQWTLEDFNPMDDIPSGVNLTLTGSSSGDVPQTPLQELFDFVA  284 (320)
T ss_pred             CCCceEEEECCCh-HHHHHHHHHhccCCEEEEEccCCCCcccCCcchhhhhhhccceEEEecchhhhhHHHHHHHHHHHH
Confidence            5689999999994 788999999999999999985322111   111111  1456666665432   345788999999


Q ss_pred             cCCCCCCCceEEEeeCChhhHHHHHHHHhcCCCceEEEE
Q 017916          324 SGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMF  362 (364)
Q Consensus       324 ~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv  362 (364)
                      ++.+  ++...+.|++  +++++|++.+.++...||+++
T Consensus       285 ~~~~--~~~~~~~~~l--~~~~~a~~~~~~~~~~~kvvv  319 (320)
T cd08243         285 AGHL--DIPPSKVFTF--DEIVEAHAYMESNRAFGKVVV  319 (320)
T ss_pred             CCce--ecccccEEcH--HHHHHHHHHHHhCCCCCcEEe
Confidence            9988  4446678888  999999999998888889886

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases

Probab=100.00  E-value=7.7e-33  Score=254.52  Aligned_cols=310  Identities=19%  Similarity=0.242  Sum_probs=231.8

Q ss_pred             ceeEEEecC---CceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCCCCCC
Q 017916           18 NMAAWLLGV---NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT   94 (364)
Q Consensus        18 ~~~~~~~~~---~~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~   94 (364)
                      |+|+++..+   ..+++++.|.|.+.++||+||+.++++|+.|.....+..  .....+|.++|+|++|+|+++|  ++.
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~p~~~~~ev~i~v~~~~i~~~d~~~~~~~~--~~~~~~~~~~g~e~~G~V~~~~--~~~   76 (326)
T cd08289           1 FQALVVEKDEDDVSVSVKNLTLDDLPEGDVLIRVAYSSVNYKDGLASIPGG--KIVKRYPFIPGIDLAGTVVESN--DPR   76 (326)
T ss_pred             CeeEEEeccCCcceeEEEEccCCCCCCCeEEEEEEEEecChHHhhhhcCCc--cccCCCCcCcccceeEEEEEcC--CCC
Confidence            456666643   368899999999999999999999999999987654311  1123458899999999999854  578


Q ss_pred             CCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCccchhhhh-hhHHHHHH
Q 017916           95 LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHA  173 (364)
Q Consensus        95 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~lP~~~~~~~aa~~~-~~~~a~~~  173 (364)
                      |++||+|++.+..                     ++ ....|+|++|+.+++++++++|+++++++++.++ .+.+|+.+
T Consensus        77 ~~~Gd~V~~~~~~---------------------~~-~~~~g~~~~~~~v~~~~~~~~p~~~~~~~a~~~~~~~~ta~~~  134 (326)
T cd08289          77 FKPGDEVIVTSYD---------------------LG-VSHHGGYSEYARVPAEWVVPLPKGLTLKEAMILGTAGFTAALS  134 (326)
T ss_pred             CCCCCEEEEcccc---------------------cC-CCCCCcceeEEEEcHHHeEECCCCCCHHHHhhhhhHHHHHHHH
Confidence            9999999875310                     00 1246999999999999999999999999988765 67778877


Q ss_pred             HHH---cCC-CCCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHH
Q 017916          174 CRR---ANI-GPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQ  248 (364)
Q Consensus       174 l~~---~~~-~~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~  248 (364)
                      ++.   ..+ .++++|||+|+ |.+|++++|+|+++|+ .++++++++++.++++++|++.+++.+.   ...+.++.+ 
T Consensus       135 l~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~v~~~~~---~~~~~~~~~-  209 (326)
T cd08289         135 IHRLEENGLTPEQGPVLVTGATGGVGSLAVSILAKLGY-EVVASTGKADAADYLKKLGAKEVIPREE---LQEESIKPL-  209 (326)
T ss_pred             HHHHHhcCCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-eEEEEecCHHHHHHHHHcCCCEEEcchh---HHHHHHHhh-
Confidence            743   333 35789999998 9999999999999999 5777778889999999999988776432   123334433 


Q ss_pred             HHcCCCccEEEECCCCHHHHHHHHHhcccCCEEEEEcCCCC-CccccchhhhhcCcEEEeeccC---CCcHHHHHHHHHc
Q 017916          249 KAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHH-EMTVPLTPAAVREVDVVGVFRY---KNTWPLCLELLRS  324 (364)
Q Consensus       249 ~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~  324 (364)
                        .+.++|++||++|+ ......+++++++|+++.+|.... ........++.+++++.+....   ......+++.+..
T Consensus       210 --~~~~~d~vld~~g~-~~~~~~~~~l~~~G~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  286 (326)
T cd08289         210 --EKQRWAGAVDPVGG-KTLAYLLSTLQYGGSVAVSGLTGGGEVETTVFPFILRGVNLLGIDSVECPMELRRRIWRRLAT  286 (326)
T ss_pred             --ccCCcCEEEECCcH-HHHHHHHHHhhcCCEEEEEeecCCCCCCcchhhhhhccceEEEEEeEecCchHHHHHHHHHHh
Confidence              25679999999995 788899999999999999986422 2222344555788888886432   1223333333322


Q ss_pred             CCCC---CCCceEEEeeCChhhHHHHHHHHhcCCCceEEEEeC
Q 017916          325 GKID---VKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  364 (364)
Q Consensus       325 g~~~---~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  364 (364)
                       .+.   ..+.+.+.|++  +++.+|++.+.++...||+++++
T Consensus       287 -~~~~~~~~~~~~~~~~l--~~~~~a~~~~~~~~~~gkvvv~~  326 (326)
T cd08289         287 -DLKPTQLLNEIKQEITL--DELPEALKQILQGRVTGRTVVKL  326 (326)
T ss_pred             -hcCccccccccceEeeH--HHHHHHHHHHhcCcccceEEEeC
Confidence             221   12345788899  99999999999999999999875

yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH

>cd08252 AL_MDR Arginate lyase and other MDR family members

Probab=100.00  E-value=2.4e-32  Score=252.29  Aligned_cols=307  Identities=22%  Similarity=0.279  Sum_probs=239.8

Q ss_pred             ceeEEEecCC------ceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCCC
Q 017916           18 NMAAWLLGVN------TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSE   91 (364)
Q Consensus        18 ~~~~~~~~~~------~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~   91 (364)
                      |+++++..+.      .++..+.+.|++.+++|+||+.++++|+.|+....+...   ....|.++|+|++|+|+.+|++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~---~~~~~~~~g~e~~G~v~~~G~~   77 (336)
T cd08252           1 MKAIGFTQPLPITDPDSLIDIELPKPVPGGRDLLVRVEAVSVNPVDTKVRAGGAP---VPGQPKILGWDASGVVEAVGSE   77 (336)
T ss_pred             CceEEecCCCCCCcccceeEccCCCCCCCCCEEEEEEEEEEcCHHHHHHHcCCCC---CCCCCcccccceEEEEEEcCCC
Confidence            3567777553      366677888888999999999999999999988766332   1345779999999999999999


Q ss_pred             CCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCccchhhhh-hhHHH
Q 017916           92 VKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVG  170 (364)
Q Consensus        92 v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~lP~~~~~~~aa~~~-~~~~a  170 (364)
                      ++.|++||+|++...                         ....|+|++|+.++.++++++|++++.++++.+. .+.+|
T Consensus        78 v~~~~~Gd~V~~~~~-------------------------~~~~g~~~~~~~v~~~~~~~ip~~~~~~~~~~~~~~~~ta  132 (336)
T cd08252          78 VTLFKVGDEVYYAGD-------------------------ITRPGSNAEYQLVDERIVGHKPKSLSFAEAAALPLTSLTA  132 (336)
T ss_pred             CCCCCCCCEEEEcCC-------------------------CCCCccceEEEEEchHHeeeCCCCCCHHHhhhhhhHHHHH
Confidence            999999999986421                         1245899999999999999999999988887665 77789


Q ss_pred             HHHH-HHcCCCC-----CCEEEEEcC-CHHHHHHHHHHHHCC-CCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHH
Q 017916          171 LHAC-RRANIGP-----ETNVLIMGA-GPIGLVTMLGARAFG-APRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAE  242 (364)
Q Consensus       171 ~~~l-~~~~~~~-----g~~VLI~Ga-g~~G~~ai~la~~~g-~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~  242 (364)
                      |+++ +.+.+++     |++|+|+|+ |++|++++++|+.+| + .+++++.++++.++++++|++.+++..   .++.+
T Consensus       133 ~~~l~~~~~~~~~~~~~g~~vlV~g~~g~vg~~~~~~a~~~G~~-~v~~~~~~~~~~~~~~~~g~~~~~~~~---~~~~~  208 (336)
T cd08252         133 WEALFDRLGISEDAENEGKTLLIIGGAGGVGSIAIQLAKQLTGL-TVIATASRPESIAWVKELGADHVINHH---QDLAE  208 (336)
T ss_pred             HHHHHHhcCCCCCcCCCCCEEEEEcCCchHHHHHHHHHHHcCCc-EEEEEcCChhhHHHHHhcCCcEEEeCC---ccHHH
Confidence            9887 5577777     999999986 999999999999999 7 677777888899999999998877643   24555


Q ss_pred             HHHHHHHHcCCCccEEEECCCCHHHHHHHHHhcccCCEEEEEcCCCCCccccchhhhhcCcEEEeeccC-----------
Q 017916          243 EVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY-----------  311 (364)
Q Consensus       243 ~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-----------  311 (364)
                      .++..   .++++|++||++|.+..+..++++++++|+++.+|...  ...+...+..+++++.+....           
T Consensus       209 ~i~~~---~~~~~d~vl~~~~~~~~~~~~~~~l~~~g~~v~~g~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  283 (336)
T cd08252         209 QLEAL---GIEPVDYIFCLTDTDQHWDAMAELIAPQGHICLIVDPQ--EPLDLGPLKSKSASFHWEFMFTRSMFQTPDMI  283 (336)
T ss_pred             HHHhh---CCCCCCEEEEccCcHHHHHHHHHHhcCCCEEEEecCCC--CcccchhhhcccceEEEEEeeccccccccchh
Confidence            55422   24689999999997788899999999999999997542  233333444566776653321           


Q ss_pred             --CCcHHHHHHHHHcCCCCCCCc-eEEEeeCChhhHHHHHHHHhcCCCceEEEEe
Q 017916          312 --KNTWPLCLELLRSGKIDVKPL-VTHRFGFSQKEVEEAFETSARGGTAIKVMFN  363 (364)
Q Consensus       312 --~~~~~~~~~~l~~g~~~~~~~-~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~  363 (364)
                        ...++++++++.++.+.+... ....+++  +++++|++.+.++...||++++
T Consensus       284 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~--~~~~~a~~~~~~~~~~~~vv~~  336 (336)
T cd08252         284 EQHEILNEVADLLDAGKLKTTLTETLGPINA--ENLREAHALLESGKTIGKIVLE  336 (336)
T ss_pred             hHHHHHHHHHHHHHCCCEecceeeeecCCCH--HHHHHHHHHHHcCCccceEEeC
Confidence              134778999999998842211 1234567  9999999999999999999874

This group contains a structure identified as an arginate lyase. Other members are identified quinone reductases, alginate lyases, and other proteins related to the zinc-dependent dehydrogenases/reductases. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, whil

>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR)

Probab=100.00  E-value=9.3e-32  Score=246.56  Aligned_cols=311  Identities=28%  Similarity=0.411  Sum_probs=245.1

Q ss_pred             eeEEEec---CCceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCCCCCCC
Q 017916           19 MAAWLLG---VNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTL   95 (364)
Q Consensus        19 ~~~~~~~---~~~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~   95 (364)
                      +++++..   +..+++.+.+.|.+.+++|+|++.++++|+.|+....|.+..  ....|.++|+|++|+|+.+|++++.|
T Consensus         2 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~i~v~~~~i~~~d~~~~~g~~~~--~~~~~~~~g~e~~G~v~~~g~~~~~~   79 (325)
T cd08253           2 RAIRYHEFGAPDVLRLGDLPVPTPGPGEVLVRVHASGVNPVDTYIRAGAYPG--LPPLPYVPGSDGAGVVEAVGEGVDGL   79 (325)
T ss_pred             ceEEEcccCCcccceeeecCCCCCCCCEEEEEEEEEecChhHhhhccCCCCC--CCCCCeecccceEEEEEeeCCCCCCC
Confidence            4555553   346888899999999999999999999999999887764322  23568899999999999999999999


Q ss_pred             CCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCccchhhhh-hhHHHHHHH
Q 017916           96 VPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHAC  174 (364)
Q Consensus        96 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~lP~~~~~~~aa~~~-~~~~a~~~l  174 (364)
                      ++||+|++.++..                       ....|++++|+.++.+.++++|+++++.+++.+. .+.+||+++
T Consensus        80 ~~Gd~v~~~~~~~-----------------------~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~~a~~~l  136 (325)
T cd08253          80 KVGDRVWLTNLGW-----------------------GRRQGTAAEYVVVPADQLVPLPDGVSFEQGAALGIPALTAYRAL  136 (325)
T ss_pred             CCCCEEEEecccc-----------------------CCCCcceeeEEEecHHHcEeCCCCCCHHHHhhhhhHHHHHHHHH
Confidence            9999999863210                       0136899999999999999999999988887665 888999998


Q ss_pred             HH-cCCCCCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcC
Q 017916          175 RR-ANIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMG  252 (364)
Q Consensus       175 ~~-~~~~~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~  252 (364)
                      .. .++++|++|+|+|+ +.+|++++++++..|+ .+++++.++++.+.++++|++.+++..  ..++.+.++.+.  .+
T Consensus       137 ~~~~~~~~g~~vlI~g~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~--~~~~~~~~~~~~--~~  211 (325)
T cd08253         137 FHRAGAKAGETVLVHGGSGAVGHAAVQLARWAGA-RVIATASSAEGAELVRQAGADAVFNYR--AEDLADRILAAT--AG  211 (325)
T ss_pred             HHHhCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCEEEeCC--CcCHHHHHHHHc--CC
Confidence            54 88999999999997 9999999999999999 577777888888888889988776643  345555555543  24


Q ss_pred             CCccEEEECCCCHHHHHHHHHhcccCCEEEEEcCCCCCccccchhhhhcCcEEEeeccC-------CCcHHHHHHHHHcC
Q 017916          253 TGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY-------KNTWPLCLELLRSG  325 (364)
Q Consensus       253 ~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~l~~g  325 (364)
                      +++|+++|++|. ......+++++++|+++.++............+..++.++.+...+       .+.++.+.+++.++
T Consensus       212 ~~~d~vi~~~~~-~~~~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  290 (325)
T cd08253         212 QGVDVIIEVLAN-VNLAKDLDVLAPGGRIVVYGSGGLRGTIPINPLMAKEASIRGVLLYTATPEERAAAAEAIAAGLADG  290 (325)
T ss_pred             CceEEEEECCch-HHHHHHHHhhCCCCEEEEEeecCCcCCCChhHHHhcCceEEeeehhhcCHHHHHHHHHHHHHHHHCC
Confidence            589999999995 5678889999999999999754322233333334566666554332       23466677788888


Q ss_pred             CCCCCCceEEEeeCChhhHHHHHHHHhcCCCceEEEEeC
Q 017916          326 KIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  364 (364)
Q Consensus       326 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  364 (364)
                      .+  .+.....|++  +++.++++.+.++...||+++++
T Consensus       291 ~i--~~~~~~~~~~--~~~~~~~~~~~~~~~~~kvv~~~  325 (325)
T cd08253         291 AL--RPVIAREYPL--EEAAAAHEAVESGGAIGKVVLDP  325 (325)
T ss_pred             Cc--cCccccEEcH--HHHHHHHHHHHcCCCcceEEEeC
Confidence            87  4556678888  99999999999999999999874

Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts

>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase

Probab=100.00  E-value=1.2e-31  Score=245.52  Aligned_cols=305  Identities=26%  Similarity=0.361  Sum_probs=242.6

Q ss_pred             ceeEEEec---CCceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCCCCCC
Q 017916           18 NMAAWLLG---VNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT   94 (364)
Q Consensus        18 ~~~~~~~~---~~~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~   94 (364)
                      |+++++..   +..+++.+.+.|.+.+++|+|||.++++|+.|+....+.+..  ...+|.++|+|++|+|+.+|+++..
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~--~~~~~~~~g~e~~G~v~~vg~~~~~   78 (323)
T cd05276           1 MKAIVIKEPGGPEVLELGEVPKPAPGPGEVLIRVAAAGVNRADLLQRQGLYPP--PPGASDILGLEVAGVVVAVGPGVTG   78 (323)
T ss_pred             CeEEEEecCCCcccceEEecCCCCCCCCEEEEEEEEeecCHHHHHHhCCCCCC--CCCCCCcccceeEEEEEeeCCCCCC
Confidence            46777765   456788888888889999999999999999999887664321  2346789999999999999999999


Q ss_pred             CCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCccchhhhh-hhHHHHHH
Q 017916           95 LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHA  173 (364)
Q Consensus        95 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~lP~~~~~~~aa~~~-~~~~a~~~  173 (364)
                      +++||+|+++                            ..+|+|++|+.+++++++++|+++++.+++.+. .+.++|++
T Consensus        79 ~~~Gd~V~~~----------------------------~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~l~~~~~~a~~~  130 (323)
T cd05276          79 WKVGDRVCAL----------------------------LAGGGYAEYVVVPAGQLLPVPEGLSLVEAAALPEVFFTAWQN  130 (323)
T ss_pred             CCCCCEEEEe----------------------------cCCCceeEEEEcCHHHhccCCCCCCHHHHhhchhHHHHHHHH
Confidence            9999999875                            134899999999999999999999988887664 88899999


Q ss_pred             HH-HcCCCCCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHc
Q 017916          174 CR-RANIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAM  251 (364)
Q Consensus       174 l~-~~~~~~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~  251 (364)
                      +. ...+.++++|+|+|+ |++|++++++++..|++ ++.++.++++.+.++.+|++.+++..  ..++.+.+....  .
T Consensus       131 ~~~~~~~~~~~~vlv~g~~~~ig~~~~~~~~~~g~~-v~~~~~~~~~~~~~~~~g~~~~~~~~--~~~~~~~~~~~~--~  205 (323)
T cd05276         131 LFQLGGLKAGETVLIHGGASGVGTAAIQLAKALGAR-VIATAGSEEKLEACRALGADVAINYR--TEDFAEEVKEAT--G  205 (323)
T ss_pred             HHHhcCCCCCCEEEEEcCcChHHHHHHHHHHHcCCE-EEEEcCCHHHHHHHHHcCCCEEEeCC--chhHHHHHHHHh--C
Confidence            84 578899999999997 99999999999999995 67777788888888889987766543  245555555443  2


Q ss_pred             CCCccEEEECCCCHHHHHHHHHhcccCCEEEEEcCCCC-CccccchhhhhcCcEEEeeccC-----------CCcHHHHH
Q 017916          252 GTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHH-EMTVPLTPAAVREVDVVGVFRY-----------KNTWPLCL  319 (364)
Q Consensus       252 ~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~  319 (364)
                      +.++|++||++|+ ......+++++++|+++.++.... ........++.+++++.+....           ...+.+++
T Consensus       206 ~~~~d~vi~~~g~-~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  284 (323)
T cd05276         206 GRGVDVILDMVGG-DYLARNLRALAPDGRLVLIGLLGGAKAELDLAPLLRKRLTLTGSTLRSRSLEEKAALAAAFREHVW  284 (323)
T ss_pred             CCCeEEEEECCch-HHHHHHHHhhccCCEEEEEecCCCCCCCCchHHHHHhCCeEEEeeccchhhhccHHHHHHHHHHHH
Confidence            4679999999994 557889999999999999985322 2233344455678887776532           12356788


Q ss_pred             HHHHcCCCCCCCceEEEeeCChhhHHHHHHHHhcCCCceEEEE
Q 017916          320 ELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMF  362 (364)
Q Consensus       320 ~~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv  362 (364)
                      +++.++++  .+...+.|++  +++++|++.+.++...||+++
T Consensus       285 ~~~~~~~~--~~~~~~~~~~--~~~~~a~~~~~~~~~~~kvv~  323 (323)
T cd05276         285 PLFASGRI--RPVIDKVFPL--EEAAEAHRRMESNEHIGKIVL  323 (323)
T ss_pred             HHHHCCCc--cCCcceEEcH--HHHHHHHHHHHhCCCcceEeC
Confidence            88989988  4456788888  999999999998888888874

PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding

>cd08288 MDR_yhdh Yhdh putative quinone oxidoreductases

Probab=100.00  E-value=1.3e-31  Score=246.14  Aligned_cols=307  Identities=21%  Similarity=0.254  Sum_probs=235.5

Q ss_pred             ceeEEEecCC---ceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCCCCCC
Q 017916           18 NMAAWLLGVN---TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT   94 (364)
Q Consensus        18 ~~~~~~~~~~---~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~   94 (364)
                      |+++++.+++   .+++++.|.|++++++|+|||.++++|+.|+....|.+.  .....|.++|+|++|+|++  +++++
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~--~~~~~~~~~g~e~~G~V~~--~~~~~   76 (324)
T cd08288           1 FKALVLEKDDGGTSAELRELDESDLPEGDVTVEVHYSTLNYKDGLAITGKGG--IVRTFPLVPGIDLAGTVVE--SSSPR   76 (324)
T ss_pred             CeeEEEeccCCCcceEEEECCCCCCCCCeEEEEEEEEecCHHHHHHhcCCcc--ccCCCCCccccceEEEEEe--CCCCC
Confidence            4667766543   799999999999999999999999999999988776431  1134578899999999988  77788


Q ss_pred             CCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCccchhhhh-hhHHHHHH
Q 017916           95 LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHA  173 (364)
Q Consensus        95 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~lP~~~~~~~aa~~~-~~~~a~~~  173 (364)
                      +++||+|++.....              +        ...+|+|++|+.++.++++++|+++++++++.+. .+++++.+
T Consensus        77 ~~~Gd~V~~~~~~~--------------~--------~~~~g~~~~~~~v~~~~~~~lp~~~~~~~~~~~~~~~~ta~~~  134 (324)
T cd08288          77 FKPGDRVVLTGWGV--------------G--------ERHWGGYAQRARVKADWLVPLPEGLSARQAMAIGTAGFTAMLC  134 (324)
T ss_pred             CCCCCEEEECCccC--------------C--------CCCCCcceeEEEEchHHeeeCCCCCCHHHHhhhhhHHHHHHHH
Confidence            99999999752100              0        0135899999999999999999999998888665 66677766


Q ss_pred             HH---HcCCC-CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHH
Q 017916          174 CR---RANIG-PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQ  248 (364)
Q Consensus       174 l~---~~~~~-~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~  248 (364)
                      ++   ..... ++++|||+|+ |.+|++++|+|+++|++ +++++.++++.++++++|+++++++++    +...++.+ 
T Consensus       135 ~~~~~~~~~~~~~~~vlI~ga~g~vg~~~~~~A~~~G~~-vi~~~~~~~~~~~~~~~g~~~~~~~~~----~~~~~~~~-  208 (324)
T cd08288         135 VMALEDHGVTPGDGPVLVTGAAGGVGSVAVALLARLGYE-VVASTGRPEEADYLRSLGASEIIDRAE----LSEPGRPL-  208 (324)
T ss_pred             HHHHhhcCcCCCCCEEEEECCCcHHHHHHHHHHHHCCCe-EEEEeCCHHHHHHHHhcCCCEEEEcch----hhHhhhhh-
Confidence            53   44555 6789999998 99999999999999995 677778889999999999988877542    22233333 


Q ss_pred             HHcCCCccEEEECCCCHHHHHHHHHhcccCCEEEEEcCCCC-CccccchhhhhcCcEEEeeccC-------CCcHHHHHH
Q 017916          249 KAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHH-EMTVPLTPAAVREVDVVGVFRY-------KNTWPLCLE  320 (364)
Q Consensus       249 ~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~  320 (364)
                        ...++|.+||+++. ......+..++.+|+++.+|.... ........+..+++++.+....       .+.+..+.+
T Consensus       209 --~~~~~~~~~d~~~~-~~~~~~~~~~~~~g~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  285 (324)
T cd08288         209 --QKERWAGAVDTVGG-HTLANVLAQTRYGGAVAACGLAGGADLPTTVMPFILRGVTLLGIDSVMAPIERRRAAWARLAR  285 (324)
T ss_pred             --ccCcccEEEECCcH-HHHHHHHHHhcCCCEEEEEEecCCCCCCcchhhhhccccEEEEEEeecccchhhHHHHHHHHH
Confidence              24468999999994 566788889999999999885321 1123333444678888876422       234667778


Q ss_pred             HHHcCCCCCCCceEEEeeCChhhHHHHHHHHhcCCCceEEEEeC
Q 017916          321 LLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  364 (364)
Q Consensus       321 ~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  364 (364)
                      ++.++.+  ++ +.+.+++  +++++|++.++.+...||+++++
T Consensus       286 ~~~~~~~--~~-i~~~~~~--~~~~~a~~~~~~~~~~~~vvv~~  324 (324)
T cd08288         286 DLDPALL--EA-LTREIPL--ADVPDAAEAILAGQVRGRVVVDV  324 (324)
T ss_pred             HHhcCCc--cc-cceeecH--HHHHHHHHHHhcCCccCeEEEeC
Confidence            8888877  44 3678888  99999999999999999999875

Yhdh putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catal

>cd08248 RTN4I1 Human Reticulon 4 Interacting Protein 1

Probab=100.00  E-value=7.3e-32  Score=250.50  Aligned_cols=307  Identities=25%  Similarity=0.326  Sum_probs=230.7

Q ss_pred             ceeEEEecCC----ceEEEEecCCCC-CCCcEEEEEeeeeeCcccHhhhhhcccC-------C-----ccCCCCcccccc
Q 017916           18 NMAAWLLGVN----TLKIQPFELPSL-GPYDVLVRMKAVGICGSDVHYLKTLRCA-------D-----FVVKEPMVIGHE   80 (364)
Q Consensus        18 ~~~~~~~~~~----~~~~~~~~~p~~-~~~~VlV~v~~~~l~~~d~~~~~g~~~~-------~-----~~~~~p~~~G~e   80 (364)
                      |+++++.+..    .+++.+.+.|.+ ++++|+|||.++++|+.|+....|...+       .     ....+|.++|+|
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~~ev~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~G~e   80 (350)
T cd08248           1 MKAWQIHSYGGIDSLLLLENARIPVIRKPNQVLIKVHAASVNPIDVLMRSGYGRTLLNKKRKPQSCKYSGIEFPLTLGRD   80 (350)
T ss_pred             CceEEecccCCCcceeeecccCCCCCCCCCeEEEEEEEEecCchhHHHHcCCccchhhhhhccccccccCCCCCeeecce
Confidence            4566655332    388899999998 5999999999999999999988763211       0     024568899999


Q ss_pred             eeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCccc
Q 017916           81 CAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEE  160 (364)
Q Consensus        81 ~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~lP~~~~~~~  160 (364)
                      ++|+|+.+|++++.+++||+|++.+..                         ...|+|++|+.+++++++++|+++++..
T Consensus        81 ~~G~v~~vG~~v~~~~~Gd~V~~~~~~-------------------------~~~g~~~~~~~v~~~~~~~lp~~~~~~~  135 (350)
T cd08248          81 CSGVVVDIGSGVKSFEIGDEVWGAVPP-------------------------WSQGTHAEYVVVPENEVSKKPKNLSHEE  135 (350)
T ss_pred             eEEEEEecCCCcccCCCCCEEEEecCC-------------------------CCCccceeEEEecHHHeecCCCCCCHHH
Confidence            999999999999999999999975321                         1359999999999999999999999988


Q ss_pred             hhhhh-hhHHHHHHHH-HcCCC----CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEec
Q 017916          161 GAMCE-PLSVGLHACR-RANIG----PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKV  233 (364)
Q Consensus       161 aa~~~-~~~~a~~~l~-~~~~~----~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~  233 (364)
                      ++.+. .+.++|+++. .+.+.    +|++|+|+|+ |++|++++++|+++|++ ++++..+ ++.++++++|++.+++.
T Consensus       136 aa~~~~~~~ta~~~l~~~~~~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~G~~-v~~~~~~-~~~~~~~~~g~~~~~~~  213 (350)
T cd08248         136 AASLPYAGLTAWSALVNVGGLNPKNAAGKRVLILGGSGGVGTFAIQLLKAWGAH-VTTTCST-DAIPLVKSLGADDVIDY  213 (350)
T ss_pred             HhhchhHHHHHHHHHHHhccCCCccCCCCEEEEECCCChHHHHHHHHHHHCCCe-EEEEeCc-chHHHHHHhCCceEEEC
Confidence            88665 8889999884 46665    4999999997 99999999999999995 5555544 67788899998877764


Q ss_pred             CCCcccHHHHHHHHHHHcCCCccEEEECCCCHHHHHHHHHhcccCCEEEEEcCCCCCc----cc----cchhhhh-----
Q 017916          234 STNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEM----TV----PLTPAAV-----  300 (364)
Q Consensus       234 ~~~~~~~~~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~----~~----~~~~~~~-----  300 (364)
                      ..  .++.+.+..     ..++|++||++|. .....++++++++|+++.++......    ..    .......     
T Consensus       214 ~~--~~~~~~l~~-----~~~vd~vi~~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  285 (350)
T cd08248         214 NN--EDFEEELTE-----RGKFDVILDTVGG-DTEKWALKLLKKGGTYVTLVSPLLKNTDKLGLVGGMLKSAVDLLKKNV  285 (350)
T ss_pred             CC--hhHHHHHHh-----cCCCCEEEECCCh-HHHHHHHHHhccCCEEEEecCCcccccccccccchhhhhHHHHHHHHH
Confidence            32  344443322     3579999999995 58889999999999999997432110    00    0001111     


Q ss_pred             c----CcEEE-e-eccCCCcHHHHHHHHHcCCCCCCCceEEEeeCChhhHHHHHHHHhcCCCceEEEEe
Q 017916          301 R----EVDVV-G-VFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFN  363 (364)
Q Consensus       301 ~----~~~~~-~-~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~  363 (364)
                      +    ..... + .......+.++++++.++.+  .+.+.+.|++  +++.+|++.+.++...+|++++
T Consensus       286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~--~~~~~~~~~~--~~~~~a~~~~~~~~~~~~vv~~  350 (350)
T cd08248         286 KSLLKGSHYRWGFFSPSGSALDELAKLVEDGKI--KPVIDKVFPF--EEVPEAYEKVESGHARGKTVIK  350 (350)
T ss_pred             HHHhcCCCeeEEEECCCHHHHHHHHHHHhCCCE--ecccceeecH--HHHHHHHHHHhcCCCceEEEeC
Confidence            1    11010 1 11124568899999999987  4456788888  9999999999988888898874

Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>cd05288 PGDH Prostaglandin dehydrogenases

Probab=100.00  E-value=6e-32  Score=248.89  Aligned_cols=293  Identities=21%  Similarity=0.216  Sum_probs=228.6

Q ss_pred             CCceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCCCCCCCCCCCEEEEcC
Q 017916           26 VNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEP  105 (364)
Q Consensus        26 ~~~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~  105 (364)
                      ++.+++.+.+.|++.+++|+|||.++++|+.|.....+......+...+.++|+|++|+|+++|++  .+++||+|+++ 
T Consensus        17 ~~~~~~~~~~~p~~~~~~v~Vkv~~~~i~~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~~G~~--~~~~Gd~V~~~-   93 (329)
T cd05288          17 PDDFELVEVPLPELKDGEVLVRTLYLSVDPYMRGWMSDAKSYSPPVQLGEPMRGGGVGEVVESRSP--DFKVGDLVSGF-   93 (329)
T ss_pred             ccceeEEeccCCCCCCCeEEEEEEEEecCHHHhhhhccCcccCCCccCCCcccCceEEEEEecCCC--CCCCCCEEecc-
Confidence            468999999999999999999999999999877655442111111123567899999999999964  79999999864 


Q ss_pred             CcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecC-CceEECCCCCC--ccc-hh-hhhhhHHHHHHHH-HcCC
Q 017916          106 GISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPA-DLCFKLPDNVS--LEE-GA-MCEPLSVGLHACR-RANI  179 (364)
Q Consensus       106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~-~~~~~lP~~~~--~~~-aa-~~~~~~~a~~~l~-~~~~  179 (364)
                                                    ++|++|+.+++ +.++++|++++  +.. ++ +...+.+||+++. ...+
T Consensus        94 ------------------------------~~~~~~~~v~~~~~~~~lP~~~~~~~~~~~~~l~~~~~ta~~~l~~~~~~  143 (329)
T cd05288          94 ------------------------------LGWQEYAVVDGASGLRKLDPSLGLPLSAYLGVLGMTGLTAYFGLTEIGKP  143 (329)
T ss_pred             ------------------------------cceEEEEEecchhhcEECCcccCCCHHHHHHhcccHHHHHHHHHHhccCC
Confidence                                          58999999999 99999999985  333 33 3458889999984 4788


Q ss_pred             CCCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHH-cCCCeEEecCCCcccHHHHHHHHHHHcCCCccE
Q 017916          180 GPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKE-LGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDV  257 (364)
Q Consensus       180 ~~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~-lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~  257 (364)
                      .++++|||+|+ |.+|++++|+|+..|+ .++++++++++.+.+++ +|++.++++..  .++.+.+..+.   ++++|+
T Consensus       144 ~~~~~vlI~g~~g~ig~~~~~~a~~~G~-~vi~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~~v~~~~---~~~~d~  217 (329)
T cd05288         144 KPGETVVVSAAAGAVGSVVGQIAKLLGA-RVVGIAGSDEKCRWLVEELGFDAAINYKT--PDLAEALKEAA---PDGIDV  217 (329)
T ss_pred             CCCCEEEEecCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhhcCCceEEecCC--hhHHHHHHHhc---cCCceE
Confidence            99999999996 9999999999999999 57777788888888888 99988777543  45666665553   467999


Q ss_pred             EEECCCCHHHHHHHHHhcccCCEEEEEcCCCCCcc------ccchhhhhcCcEEEeeccC------CCcHHHHHHHHHcC
Q 017916          258 SFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMT------VPLTPAAVREVDVVGVFRY------KNTWPLCLELLRSG  325 (364)
Q Consensus       258 vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~------~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~l~~g  325 (364)
                      +|||+| ...+...+++++++|+++.+|.......      .+......+++++.+....      .+.+.++++++.++
T Consensus       218 vi~~~g-~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g  296 (329)
T cd05288         218 YFDNVG-GEILDAALTLLNKGGRIALCGAISQYNATEPPGPKNLGNIITKRLTMQGFIVSDYADRFPEALAELAKWLAEG  296 (329)
T ss_pred             EEEcch-HHHHHHHHHhcCCCceEEEEeeccCcccccccccccHHHHhhCcceEEeecchhhHHHHHHHHHHHHHHHHCC
Confidence            999999 5788899999999999999984332111      1233455677888776543      24578889999999


Q ss_pred             CCCCCCceEEEeeCChhhHHHHHHHHhcCCCceEEEE
Q 017916          326 KIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMF  362 (364)
Q Consensus       326 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv  362 (364)
                      .+...  ....+++  +++.++++.+.++...||+++
T Consensus       297 ~i~~~--~~~~~~l--~~~~~a~~~~~~~~~~gkvvv  329 (329)
T cd05288         297 KLKYR--EDVVEGL--ENAPEAFLGLFTGKNTGKLVV  329 (329)
T ss_pred             Ccccc--ccccccH--HHHHHHHHHHhcCCCccceeC
Confidence            98433  3455778  999999999998888888874

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino

>cd08272 MDR6 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=1.9e-31  Score=244.81  Aligned_cols=307  Identities=28%  Similarity=0.361  Sum_probs=240.4

Q ss_pred             ceeEEEecC---CceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCCCCCC
Q 017916           18 NMAAWLLGV---NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT   94 (364)
Q Consensus        18 ~~~~~~~~~---~~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~   94 (364)
                      |+++++.++   +.+++.+.+.|.+.+++|+|+|.++++|+.|+....+...  .....|.++|+|++|+|+.+|+++..
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~--~~~~~~~~~g~e~~G~v~~~G~~~~~   78 (326)
T cd08272           1 MKALVLESFGGPEVFELREVPRPQPGPGQVLVRVHASGVNPLDTKIRRGGAA--ARPPLPAILGCDVAGVVEAVGEGVTR   78 (326)
T ss_pred             CeEEEEccCCCchheEEeecCCCCCCCCeEEEEEEEEecCHHHHHHhCCCCC--CCCCCCcccccceeEEEEEeCCCCCC
Confidence            467777654   3478888888888999999999999999999988776432  12345889999999999999999999


Q ss_pred             CCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCccchhhhh-hhHHHHHH
Q 017916           95 LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHA  173 (364)
Q Consensus        95 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~lP~~~~~~~aa~~~-~~~~a~~~  173 (364)
                      |++||+|++....                       .....|+|++|+.++.++++++|+++++..++.++ .+.+||++
T Consensus        79 ~~~Gd~V~~~~~~-----------------------~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~  135 (326)
T cd08272          79 FRVGDEVYGCAGG-----------------------LGGLQGSLAEYAVVDARLLALKPANLSMREAAALPLVGITAWEG  135 (326)
T ss_pred             CCCCCEEEEccCC-----------------------cCCCCCceeEEEEecHHHcccCCCCCCHHHHHHhHHHHHHHHHH
Confidence            9999999975310                       00135899999999999999999999988877665 77889988


Q ss_pred             H-HHcCCCCCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHc
Q 017916          174 C-RRANIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAM  251 (364)
Q Consensus       174 l-~~~~~~~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~  251 (364)
                      + +..++++|++++|+|+ |.+|++++++|+.+|++ ++.++.+ ++.++++++|++.+++..  .. +.+.++.+.  .
T Consensus       136 l~~~~~~~~~~~vli~g~~~~~g~~~~~~a~~~g~~-v~~~~~~-~~~~~~~~~g~~~~~~~~--~~-~~~~~~~~~--~  208 (326)
T cd08272         136 LVDRAAVQAGQTVLIHGGAGGVGHVAVQLAKAAGAR-VYATASS-EKAAFARSLGADPIIYYR--ET-VVEYVAEHT--G  208 (326)
T ss_pred             HHHhcCCCCCCEEEEEcCCCcHHHHHHHHHHHcCCE-EEEEech-HHHHHHHHcCCCEEEecc--hh-HHHHHHHhc--C
Confidence            7 5688999999999986 99999999999999995 5666666 888888889987766632  23 555555443  2


Q ss_pred             CCCccEEEECCCCHHHHHHHHHhcccCCEEEEEcCCCCCccccchhhhhcCcEEEeeccC------------CCcHHHHH
Q 017916          252 GTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY------------KNTWPLCL  319 (364)
Q Consensus       252 ~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~  319 (364)
                      +.++|+++|++++ ......+++++++|+++.++... .  ..+.....+++.+.+....            .+.+.+++
T Consensus       209 ~~~~d~v~~~~~~-~~~~~~~~~l~~~g~~v~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  284 (326)
T cd08272         209 GRGFDVVFDTVGG-ETLDASFEAVALYGRVVSILGGA-T--HDLAPLSFRNATYSGVFTLLPLLTGEGRAHHGEILREAA  284 (326)
T ss_pred             CCCCcEEEECCCh-HHHHHHHHHhccCCEEEEEecCC-c--cchhhHhhhcceEEEEEcccccccccchhhHHHHHHHHH
Confidence            4679999999995 67788999999999999987543 1  1222333566666654321            34577888


Q ss_pred             HHHHcCCCCCCCceE-EEeeCChhhHHHHHHHHhcCCCceEEEEeC
Q 017916          320 ELLRSGKIDVKPLVT-HRFGFSQKEVEEAFETSARGGTAIKVMFNL  364 (364)
Q Consensus       320 ~~l~~g~~~~~~~~~-~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  364 (364)
                      +++.++.+  .+.+. +.|++  +++.++++.+.++...+|+++++
T Consensus       285 ~~l~~~~l--~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~vv~~~  326 (326)
T cd08272         285 RLVERGQL--RPLLDPRTFPL--EEAAAAHARLESGSARGKIVIDV  326 (326)
T ss_pred             HHHHCCCc--ccccccceecH--HHHHHHHHHHHcCCcccEEEEEC
Confidence            99999987  44433 77888  99999999999888899999875

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08247 AST1_like AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast

Probab=100.00  E-value=2.1e-31  Score=247.60  Aligned_cols=315  Identities=20%  Similarity=0.272  Sum_probs=227.5

Q ss_pred             eeEEEecC-CceEEEEecCCCC---CCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCCCCC-
Q 017916           19 MAAWLLGV-NTLKIQPFELPSL---GPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVK-   93 (364)
Q Consensus        19 ~~~~~~~~-~~~~~~~~~~p~~---~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~-   93 (364)
                      +++++..+ ..++++..+.|.+   ++++|+||+.++++|+.|+....+....  ....|.++|+|++|+|+++|++++ 
T Consensus         2 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~v~I~v~~~~~~~~d~~~~~~~~~~--~~~~~~~~g~e~~G~V~~vG~~v~~   79 (352)
T cd08247           2 KALTFKNNTSPLTITTIKLPLPNCYKDNEIVVKVHAAALNPVDLKLYNSYTFH--FKVKEKGLGRDYSGVIVKVGSNVAS   79 (352)
T ss_pred             ceEEEecCCCcceeeccCCCCCCCCCCCeEEEEEEEEecChHhHHHhcccccc--cccCCCccCceeEEEEEEeCccccc
Confidence            45555544 3455555555443   8999999999999999998876532111  112478999999999999999998 


Q ss_pred             CCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCC----ceEECCCCCCccchhhhh-hhH
Q 017916           94 TLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPAD----LCFKLPDNVSLEEGAMCE-PLS  168 (364)
Q Consensus        94 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~----~~~~lP~~~~~~~aa~~~-~~~  168 (364)
                      .|++||+|++.....|                       ...|+|++|+.++.+    .++++|+++++.+++.++ .+.
T Consensus        80 ~~~~Gd~V~~~~~~~~-----------------------~~~g~~~~~~~v~~~~~~~~~~~lP~~l~~~~aa~~~~~~~  136 (352)
T cd08247          80 EWKVGDEVCGIYPHPY-----------------------GGQGTLSQYLLVDPKKDKKSITRKPENISLEEAAAWPLVLG  136 (352)
T ss_pred             CCCCCCEEEEeecCCC-----------------------CCCceeeEEEEEccccccceeEECCCCCCHHHHHHhHHHHH
Confidence            8999999997632111                       135899999999998    789999999999988765 778


Q ss_pred             HHHHHHHH-c-CCCCCCEEEEEcC-CHHHHHHHHHHHHCCC-CEEEEEecChhHHHHHHHcCCCeEEecCCCcc-cHHHH
Q 017916          169 VGLHACRR-A-NIGPETNVLIMGA-GPIGLVTMLGARAFGA-PRIVIVDVDDYRLSVAKELGADNIVKVSTNLQ-DIAEE  243 (364)
Q Consensus       169 ~a~~~l~~-~-~~~~g~~VLI~Ga-g~~G~~ai~la~~~g~-~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~-~~~~~  243 (364)
                      +||++++. . ++++|++|||+|+ +.+|++++++|+.+|. +.++++. ++++.+.++++|++.+++++.... .+...
T Consensus       137 ta~~~l~~~~~~~~~g~~vlI~ga~~~vg~~~~~~a~~~~~~~~v~~~~-~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~  215 (352)
T cd08247         137 TAYQILEDLGQKLGPDSKVLVLGGSTSVGRFAIQLAKNHYNIGTVVGTC-SSRSAELNKKLGADHFIDYDAHSGVKLLKP  215 (352)
T ss_pred             HHHHHHHHhhhccCCCCeEEEECCCchHHHHHHHHHHhcCCcceEEEEe-ChhHHHHHHHhCCCEEEecCCCcccchHHH
Confidence            99999865 4 6999999999998 8999999999998754 3566665 445556778899988877543211 03333


Q ss_pred             HHHHHHHcCCCccEEEECCCCHHHHHHHHHhcc---cCCEEEEEc-CCCCCcc-----------c----cchhhhhcCcE
Q 017916          244 VEKIQKAMGTGIDVSFDCAGFNKTMSTALSATR---AGGKVCLVG-MGHHEMT-----------V----PLTPAAVREVD  304 (364)
Q Consensus       244 i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~---~~G~~v~~g-~~~~~~~-----------~----~~~~~~~~~~~  304 (364)
                      +.... +.++++|++|||+|+......++++++   ++|+++.++ ....+..           .    ......+....
T Consensus       216 ~~~~~-~~~~~~d~vl~~~g~~~~~~~~~~~l~~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  294 (352)
T cd08247         216 VLENV-KGQGKFDLILDCVGGYDLFPHINSILKPKSKNGHYVTIVGDYKANYKKDTFNSWDNPSANARKLFGSLGLWSYN  294 (352)
T ss_pred             HHHhh-cCCCCceEEEECCCCHHHHHHHHHHhCccCCCCEEEEEeCCCcccccchhhhhccccchhhhhhhhhhcCCCcc
Confidence            32221 115689999999997678889999999   999999874 2111100           0    01111123333


Q ss_pred             EEeeccC--CCcHHHHHHHHHcCCCCCCCceEEEeeCChhhHHHHHHHHhcCCCceEEEEeC
Q 017916          305 VVGVFRY--KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  364 (364)
Q Consensus       305 ~~~~~~~--~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  364 (364)
                      +......  .+.+.++++++.++.+  .+.+.+.|++  +++++|++.++++...||+++++
T Consensus       295 ~~~~~~~~~~~~~~~~~~~~~~~~l--~~~~~~~~~l--~~~~~a~~~~~~~~~~gkvvi~~  352 (352)
T cd08247         295 YQFFLLDPNADWIEKCAELIADGKV--KPPIDSVYPF--EDYKEAFERLKSNRAKGKVVIKV  352 (352)
T ss_pred             eEEEEecCCHHHHHHHHHHHhCCCe--EeeeccEecH--HHHHHHHHHHHcCCCCCcEEEeC
Confidence            3222211  2457889999999987  4556788889  99999999999998999999874

This group contains members identified in targeting of yeast membrane proteins ATPase. AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast, identified as a multicopy suppressor of pma1 mutants which cause temperature sensitive growth arrest due to the inability of ATPase to target to the cell surface. This family is homologous to the medium chain family of dehydrogenases and reductases. Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-termi

>cd05286 QOR2 Quinone oxidoreductase (QOR)

Probab=100.00  E-value=7.2e-31  Score=240.01  Aligned_cols=296  Identities=27%  Similarity=0.348  Sum_probs=235.5

Q ss_pred             CceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCCCCCCCCCCCEEEEcCC
Q 017916           27 NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPG  106 (364)
Q Consensus        27 ~~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~  106 (364)
                      ..+.+.+.+.+.+.+++|+|+|.++++|+.|+....+.+.    ..+|.++|+|++|+|+.+|++++++++||+|++.. 
T Consensus        12 ~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~~~~~----~~~~~~~g~e~~G~v~~~g~~~~~~~~G~~V~~~~-   86 (320)
T cd05286          12 EVLEYEDVPVPEPGPGEVLVRNTAIGVNFIDTYFRSGLYP----LPLPFVLGVEGAGVVEAVGPGVTGFKVGDRVAYAG-   86 (320)
T ss_pred             cceEEeecCCCCCCCCEEEEEEEEeecCHHHHHHhcCCCC----CCCCccCCcceeEEEEEECCCCCCCCCCCEEEEec-
Confidence            4567777777778999999999999999999988776432    24577999999999999999999999999998751 


Q ss_pred             cCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCccchhhh-hhhHHHHHHHH-HcCCCCCCE
Q 017916          107 ISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMC-EPLSVGLHACR-RANIGPETN  184 (364)
Q Consensus       107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~lP~~~~~~~aa~~-~~~~~a~~~l~-~~~~~~g~~  184 (364)
                                                 ..|+|++|+.++.+.++++|++++..+++.+ ..+.++++++. ..++++|++
T Consensus        87 ---------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~g~~  139 (320)
T cd05286          87 ---------------------------PPGAYAEYRVVPASRLVKLPDGISDETAAALLLQGLTAHYLLRETYPVKPGDT  139 (320)
T ss_pred             ---------------------------CCCceeEEEEecHHHceeCCCCCCHHHHhhccchHHHHHHHHHHhcCCCCCCE
Confidence                                       2589999999999999999999998887755 47778888884 588999999


Q ss_pred             EEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcCCCccEEEECCC
Q 017916          185 VLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAG  263 (364)
Q Consensus       185 VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid~~g  263 (364)
                      |||+|+ |.+|++++++|+.+|+ .+++++.++++.+.++++|++.+++..  ..++.+.++.+.  .+.++|++|||++
T Consensus       140 vlI~g~~g~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~--~~~~~~~~~~~~--~~~~~d~vl~~~~  214 (320)
T cd05286         140 VLVHAAAGGVGLLLTQWAKALGA-TVIGTVSSEEKAELARAAGADHVINYR--DEDFVERVREIT--GGRGVDVVYDGVG  214 (320)
T ss_pred             EEEEcCCchHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHCCCCEEEeCC--chhHHHHHHHHc--CCCCeeEEEECCC
Confidence            999997 9999999999999999 567777888889999999998776532  345656665543  2567999999999


Q ss_pred             CHHHHHHHHHhcccCCEEEEEcCCCCC-ccccchhhhhcCcEEEeeccC---------CCcHHHHHHHHHcCCCCCCCce
Q 017916          264 FNKTMSTALSATRAGGKVCLVGMGHHE-MTVPLTPAAVREVDVVGVFRY---------KNTWPLCLELLRSGKIDVKPLV  333 (364)
Q Consensus       264 ~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~l~~g~~~~~~~~  333 (364)
                      + ......+++++++|+++.+|..... ..+....+..+++++.+....         .+.+.+++++++++.+.  +..
T Consensus       215 ~-~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--~~~  291 (320)
T cd05286         215 K-DTFEGSLDSLRPRGTLVSFGNASGPVPPFDLLRLSKGSLFLTRPSLFHYIATREELLARAAELFDAVASGKLK--VEI  291 (320)
T ss_pred             c-HhHHHHHHhhccCcEEEEEecCCCCCCccCHHHHHhcCcEEEEEehhhhcCCHHHHHHHHHHHHHHHHCCCCc--Ccc
Confidence            5 6888999999999999999854332 122223333567776543211         23456788899999884  445


Q ss_pred             EEEeeCChhhHHHHHHHHhcCCCceEEEEeC
Q 017916          334 THRFGFSQKEVEEAFETSARGGTAIKVMFNL  364 (364)
Q Consensus       334 ~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  364 (364)
                      .+.|++  +++++|++.+.++...+|++++.
T Consensus       292 ~~~~~~--~~~~~a~~~~~~~~~~~~vv~~~  320 (320)
T cd05286         292 GKRYPL--ADAAQAHRDLESRKTTGKLLLIP  320 (320)
T ss_pred             cceEcH--HHHHHHHHHHHcCCCCceEEEeC
Confidence            677888  99999999999988889999863

Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone

>cd08273 MDR8 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=5.1e-31  Score=242.89  Aligned_cols=299  Identities=24%  Similarity=0.304  Sum_probs=231.3

Q ss_pred             eeEEEec---CCceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCCCCCCC
Q 017916           19 MAAWLLG---VNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTL   95 (364)
Q Consensus        19 ~~~~~~~---~~~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~   95 (364)
                      |++.+..   ++.+++.+.+.|.+.+++|+|+|.++++|+.|+..+.|.+...  ..+|.++|+|++|+|+.+|++++.|
T Consensus         2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~--~~~~~~~g~e~~G~v~~vG~~v~~~   79 (331)
T cd08273           2 REVVVTRRGGPEVLKVVEADLPEPAAGEVVVKVEASGVSFADVQMRRGLYPDQ--PPLPFTPGYDLVGRVDALGSGVTGF   79 (331)
T ss_pred             eeEEEccCCCcccEEEeccCCCCCCCCeEEEEEEEEecCHHHHHHhCCCCCCC--CCCCcccccceEEEEEEeCCCCccC
Confidence            4555553   3678999999999999999999999999999998887654221  2468899999999999999999999


Q ss_pred             CCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCccchhhhh-hhHHHHHHH
Q 017916           96 VPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHAC  174 (364)
Q Consensus        96 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~lP~~~~~~~aa~~~-~~~~a~~~l  174 (364)
                      ++||+|++.+                            ..|+|++|+.++.+.++++|+++++.+++.+. .+.+||+++
T Consensus        80 ~~Gd~V~~~~----------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~a~~~~~~~~ta~~~l  131 (331)
T cd08273          80 EVGDRVAALT----------------------------RVGGNAEYINLDAKYLVPVPEGVDAAEAVCLVLNYVTAYQML  131 (331)
T ss_pred             CCCCEEEEeC----------------------------CCcceeeEEEechHHeEECCCCCCHHHHHhhhhHHHHHHHHH
Confidence            9999999752                            24889999999999999999999998877554 888999998


Q ss_pred             H-HcCCCCCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcC
Q 017916          175 R-RANIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMG  252 (364)
Q Consensus       175 ~-~~~~~~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~  252 (364)
                      . .+++++|++|+|+|+ |.+|++++++|+..|++ ++.+.. +++.++++++|+.. ++.  ...++...  ..   .+
T Consensus       132 ~~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~g~~-v~~~~~-~~~~~~~~~~g~~~-~~~--~~~~~~~~--~~---~~  201 (331)
T cd08273         132 HRAAKVLTGQRVLIHGASGGVGQALLELALLAGAE-VYGTAS-ERNHAALRELGATP-IDY--RTKDWLPA--ML---TP  201 (331)
T ss_pred             HHhcCCCCCCEEEEECCCcHHHHHHHHHHHHcCCE-EEEEeC-HHHHHHHHHcCCeE-EcC--CCcchhhh--hc---cC
Confidence            5 478999999999997 99999999999999994 666665 88888888999653 332  22333332  12   24


Q ss_pred             CCccEEEECCCCHHHHHHHHHhcccCCEEEEEcCCCCCcc--ccc--------------hhhhhcCcEEEeeccC-----
Q 017916          253 TGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMT--VPL--------------TPAAVREVDVVGVFRY-----  311 (364)
Q Consensus       253 ~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~--~~~--------------~~~~~~~~~~~~~~~~-----  311 (364)
                      +++|+++||+|+. .....+++++++|+++.+|.......  ...              .....+.++.......     
T Consensus       202 ~~~d~vl~~~~~~-~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p  280 (331)
T cd08273         202 GGVDVVFDGVGGE-SYEESYAALAPGGTLVCYGGNSSLLQGRRSLAALGSLLARLAKLKLLPTGRRATFYYVWRDRAEDP  280 (331)
T ss_pred             CCceEEEECCchH-HHHHHHHHhcCCCEEEEEccCCCCCCccccccchhhhhhhhhhhcceeccceeEEEeechhcccCH
Confidence            5799999999954 58899999999999999985432211  110              0111223333332211     


Q ss_pred             ---CCcHHHHHHHHHcCCCCCCCceEEEeeCChhhHHHHHHHHhcCCCceEEEE
Q 017916          312 ---KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMF  362 (364)
Q Consensus       312 ---~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv  362 (364)
                         .+.+++++++++++.+  .+.+.+.|++  ++++++++.+.++...||+|+
T Consensus       281 ~~~~~~~~~~~~~~~~~~l--~~~~~~~~~~--~~~~~a~~~~~~~~~~gkvv~  330 (331)
T cd08273         281 KLFRQDLTELLDLLAKGKI--RPKIAKRLPL--SEVAEAHRLLESGKVVGKIVL  330 (331)
T ss_pred             HHHHHHHHHHHHHHHCCCc--cCCcceEEcH--HHHHHHHHHHHcCCCcceEEe
Confidence               3567889999999988  4556788888  999999999998888899886

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08251 polyketide_synthase polyketide synthase

Probab=100.00  E-value=4.5e-31  Score=239.81  Aligned_cols=288  Identities=24%  Similarity=0.379  Sum_probs=229.0

Q ss_pred             CCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCCccc
Q 017916           36 LPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHC  115 (364)
Q Consensus        36 ~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~  115 (364)
                      .|.+.+++|+||+.++++|+.|+..+.+.+..  ...+|.++|+|++|+|+.+|++++++++||+|+++..         
T Consensus         2 ~p~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~--~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~---------   70 (303)
T cd08251           2 VAPPGPGEVRIQVRAFSLNFGDLLCVRGLYPT--MPPYPFTPGFEASGVVRAVGPHVTRLAVGDEVIAGTG---------   70 (303)
T ss_pred             CCCCCCCEEEEEEEEeecChHHHHHHCCCCCC--CCCCCCCcCceeeEEEEEECCCCCCCCCCCEEEEecC---------
Confidence            56788999999999999999999988765432  2356889999999999999999999999999987521         


Q ss_pred             cCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCccchhhhh-hhHHHHHHHHHcCCCCCCEEEEEcC-CHH
Q 017916          116 KGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHACRRANIGPETNVLIMGA-GPI  193 (364)
Q Consensus       116 ~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~lP~~~~~~~aa~~~-~~~~a~~~l~~~~~~~g~~VLI~Ga-g~~  193 (364)
                                       ..+|+|++|+.+++++++++|+++++++++.+. .+.+||++++..++++|++|+|+|+ +.+
T Consensus        71 -----------------~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~g~~vli~~~~~~~  133 (303)
T cd08251          71 -----------------ESMGGHATLVTVPEDQVVRKPASLSFEEACALPVVFLTVIDAFARAGLAKGEHILIQTATGGT  133 (303)
T ss_pred             -----------------CCCcceeeEEEccHHHeEECCCCCCHHHHHHhHHHHHHHHHHHHhcCCCCCCEEEEecCCcHH
Confidence                             245899999999999999999999998888665 7889999998889999999999976 999


Q ss_pred             HHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcCCCccEEEECCCCHHHHHHHHH
Q 017916          194 GLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALS  273 (364)
Q Consensus       194 G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~  273 (364)
                      |++++|+|+++|+ .+++++.++++.+.++++|++.+++..  ..++.+.++.+.  .+.++|+++|+++ +......++
T Consensus       134 g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~--~~~~~~~i~~~~--~~~~~d~v~~~~~-~~~~~~~~~  207 (303)
T cd08251         134 GLMAVQLARLKGA-EIYATASSDDKLEYLKQLGVPHVINYV--EEDFEEEIMRLT--GGRGVDVVINTLS-GEAIQKGLN  207 (303)
T ss_pred             HHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHcCCCEEEeCC--CccHHHHHHHHc--CCCCceEEEECCc-HHHHHHHHH
Confidence            9999999999999 577777888888888999998877643  346666666553  2568999999998 678889999


Q ss_pred             hcccCCEEEEEcCCCCC--ccccchhhhhcCcEEEe-----eccC-----CCcHHHHHHHHHcCCCCCCCceEEEeeCCh
Q 017916          274 ATRAGGKVCLVGMGHHE--MTVPLTPAAVREVDVVG-----VFRY-----KNTWPLCLELLRSGKIDVKPLVTHRFGFSQ  341 (364)
Q Consensus       274 ~l~~~G~~v~~g~~~~~--~~~~~~~~~~~~~~~~~-----~~~~-----~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~  341 (364)
                      +++++|+++.++.....  ....... +.+++.+..     ....     .+.+.++++++.++.+  .+...+.|++  
T Consensus       208 ~l~~~g~~v~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~--~~~~~~~~~~--  282 (303)
T cd08251         208 CLAPGGRYVEIAMTALKSAPSVDLSV-LSNNQSFHSVDLRKLLLLDPEFIADYQAEMVSLVEEGEL--RPTVSRIFPF--  282 (303)
T ss_pred             HhccCcEEEEEeccCCCccCccChhH-hhcCceEEEEehHHhhhhCHHHHHHHHHHHHHHHHCCCc--cCCCceEEcH--
Confidence            99999999998754321  1122111 222222221     1111     3457788899999988  4456688888  


Q ss_pred             hhHHHHHHHHhcCCCceEEEE
Q 017916          342 KEVEEAFETSARGGTAIKVMF  362 (364)
Q Consensus       342 ~~~~~a~~~~~~~~~~gkvvv  362 (364)
                      ++++++++.+.++...||+++
T Consensus       283 ~~~~~~~~~~~~~~~~~~iv~  303 (303)
T cd08251         283 DDIGEAYRYLSDRENIGKVVV  303 (303)
T ss_pred             HHHHHHHHHHHhCCCcceEeC
Confidence            999999999999888888874

Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde a

>cd08271 MDR5 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=6.1e-31  Score=241.52  Aligned_cols=308  Identities=26%  Similarity=0.332  Sum_probs=238.0

Q ss_pred             ceeEEEecCC---ceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCCCCCC
Q 017916           18 NMAAWLLGVN---TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT   94 (364)
Q Consensus        18 ~~~~~~~~~~---~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~   94 (364)
                      |+++++.++.   .+++.+.|.|++.+++|+|||.++++|+.|+....+.+..   ...|.++|+|++|+|+.+|++++.
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~---~~~~~~~g~e~~G~v~~~G~~~~~   77 (325)
T cd08271           1 MKAWVLPKPGAALQLTLEEIEIPGPGAGEVLVKVHAAGLNPVDWKVIAWGPPA---WSYPHVPGVDGAGVVVAVGAKVTG   77 (325)
T ss_pred             CeeEEEccCCCcceeEEeccCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCC---CCCCcccccceEEEEEEeCCCCCc
Confidence            5778888776   8999999999999999999999999999999887664321   123778999999999999999999


Q ss_pred             CCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCccchhhh-hhhHHHHHH
Q 017916           95 LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMC-EPLSVGLHA  173 (364)
Q Consensus        95 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~lP~~~~~~~aa~~-~~~~~a~~~  173 (364)
                      +++||+|++.+..                         ...|+|++|+.++.+.++++|+++++.+++.+ ..+.+++++
T Consensus        78 ~~~Gd~V~~~~~~-------------------------~~~~~~~s~~~~~~~~~~~ip~~~~~~~~a~~~~~~~~a~~~  132 (325)
T cd08271          78 WKVGDRVAYHASL-------------------------ARGGSFAEYTVVDARAVLPLPDSLSFEEAAALPCAGLTAYQA  132 (325)
T ss_pred             CCCCCEEEeccCC-------------------------CCCccceeEEEeCHHHeEECCCCCCHHHHHhhhhhHHHHHHH
Confidence            9999999975310                         13589999999999999999999998888765 488899999


Q ss_pred             HH-HcCCCCCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHc
Q 017916          174 CR-RANIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAM  251 (364)
Q Consensus       174 l~-~~~~~~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~  251 (364)
                      +. .+++++|++|+|+|+ +.+|++++++|+..|+. ++++. ++++.++++.+|++.+++.  ...++.+.+++..  .
T Consensus       133 ~~~~~~~~~g~~vlI~g~~~~ig~~~~~~a~~~g~~-v~~~~-~~~~~~~~~~~g~~~~~~~--~~~~~~~~~~~~~--~  206 (325)
T cd08271         133 LFKKLRIEAGRTILITGGAGGVGSFAVQLAKRAGLR-VITTC-SKRNFEYVKSLGADHVIDY--NDEDVCERIKEIT--G  206 (325)
T ss_pred             HHHhcCCCCCCEEEEECCccHHHHHHHHHHHHcCCE-EEEEE-cHHHHHHHHHcCCcEEecC--CCccHHHHHHHHc--C
Confidence            84 588899999999998 89999999999999995 55554 6677788888998776653  3345555565543  2


Q ss_pred             CCCccEEEECCCCHHHHHHHHHhcccCCEEEEEcCCCCCc--cccchhhhhcCcEEEeeccC---------CCcHHHHHH
Q 017916          252 GTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEM--TVPLTPAAVREVDVVGVFRY---------KNTWPLCLE  320 (364)
Q Consensus       252 ~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~--~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~  320 (364)
                      +.++|++++++++. ....++++++++|+++.++......  .........+.+.+......         .+.+.++++
T Consensus       207 ~~~~d~vi~~~~~~-~~~~~~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  285 (325)
T cd08271         207 GRGVDAVLDTVGGE-TAAALAPTLAFNGHLVCIQGRPDASPDPPFTRALSVHEVALGAAHDHGDPAAWQDLRYAGEELLE  285 (325)
T ss_pred             CCCCcEEEECCCcH-hHHHHHHhhccCCEEEEEcCCCCCcchhHHhhcceEEEEEecccccccchhhHHHHHHHHHHHHH
Confidence            46799999999964 5567899999999999986332211  11111222333333332211         234577889


Q ss_pred             HHHcCCCCCCCceEEEeeCChhhHHHHHHHHhcCCCceEEEEeC
Q 017916          321 LLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  364 (364)
Q Consensus       321 ~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  364 (364)
                      +++++.+  .+...+.|++  +++.++++.+.++...+|+++++
T Consensus       286 ~~~~~~i--~~~~~~~~~~--~~~~~a~~~~~~~~~~~kiv~~~  325 (325)
T cd08271         286 LLAAGKL--EPLVIEVLPF--EQLPEALRALKDRHTRGKIVVTI  325 (325)
T ss_pred             HHHCCCe--eeccceEEcH--HHHHHHHHHHHcCCccceEEEEC
Confidence            9999988  4445677888  99999999999888899999874

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=3.8e-31  Score=236.41  Aligned_cols=266  Identities=37%  Similarity=0.633  Sum_probs=216.8

Q ss_pred             cEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCCccccCCCCCC
Q 017916           43 DVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNL  122 (364)
Q Consensus        43 ~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~  122 (364)
                      ||+|+|.++++|+.|+....|.+.  ....+|.++|+|++|+|+++|++++.|++||+|++.+..+|..|.+|+.    .
T Consensus         1 ~v~i~v~~~~i~~~d~~~~~g~~~--~~~~~~~~~G~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~----~   74 (271)
T cd05188           1 EVLVRVEAAGLCGTDLHIRRGGYP--PPPKLPLILGHEGAGVVVEVGPGVTGVKVGDRVVVLPNLGCGTCELCRE----L   74 (271)
T ss_pred             CeEEEEEEEEecchhHHHHcCCCC--cCCCCCcccccccEEEEEEECCCCCcCCCCCEEEEcCCCCCCCCHHHHh----h
Confidence            689999999999999998877542  1245688999999999999999999999999999999999999999997    7


Q ss_pred             CCCccccccCCCCCcceeEEEecCCceEECCCCCCccchhhh-hhhHHHHHHHHH-cCCCCCCEEEEEcCCHHHHHHHHH
Q 017916          123 CPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMC-EPLSVGLHACRR-ANIGPETNVLIMGAGPIGLVTMLG  200 (364)
Q Consensus       123 ~~~~~~~~~~~~~g~~~~~v~~~~~~~~~lP~~~~~~~aa~~-~~~~~a~~~l~~-~~~~~g~~VLI~Gag~~G~~ai~l  200 (364)
                      |+...+.+ ....|+|++|+.++.+.++++|+++++++++.+ ..+.+||++++. ..++++++|||+|++.+|++++++
T Consensus        75 ~~~~~~~~-~~~~g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~~a~~~l~~~~~~~~~~~vli~g~~~~G~~~~~~  153 (271)
T cd05188          75 CPGGGILG-EGLDGGFAEYVVVPADNLVPLPDGLSLEEAALLPEPLATAYHALRRAGVLKPGDTVLVLGAGGVGLLAAQL  153 (271)
T ss_pred             CCCCCEec-cccCCcceEEEEechHHeEECCCCCCHHHhhHhcCHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHH
Confidence            77666544 456799999999999999999999999998877 589999999965 556899999999985599999999


Q ss_pred             HHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcCCCccEEEECCCCHHHHHHHHHhcccCCE
Q 017916          201 ARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGK  280 (364)
Q Consensus       201 a~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~  280 (364)
                      ++..|. .+++++.++++.++++++|.+.++++.  ..++.+.+.   ...++++|++||++++......++++|+++|+
T Consensus       154 a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~--~~~~~~~~~---~~~~~~~d~vi~~~~~~~~~~~~~~~l~~~G~  227 (271)
T cd05188         154 AKAAGA-RVIVTDRSDEKLELAKELGADHVIDYK--EEDLEEELR---LTGGGGADVVIDAVGGPETLAQALRLLRPGGR  227 (271)
T ss_pred             HHHcCC-eEEEEcCCHHHHHHHHHhCCceeccCC--cCCHHHHHH---HhcCCCCCEEEECCCCHHHHHHHHHhcccCCE
Confidence            999997 678888888899999999988776643  344555444   23356899999999965788899999999999


Q ss_pred             EEEEcCCCCCccc-cchhhhhcCcEEEeeccC-CCcHHHHHHH
Q 017916          281 VCLVGMGHHEMTV-PLTPAAVREVDVVGVFRY-KNTWPLCLEL  321 (364)
Q Consensus       281 ~v~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~  321 (364)
                      ++.++........ .......+++++.+.... ...+++++++
T Consensus       228 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  270 (271)
T cd05188         228 IVVVGGTSGGPPLDDLRRLLFKELTIIGSTGGTREDFEEALDL  270 (271)
T ss_pred             EEEEccCCCCCCcccHHHHHhcceEEEEeecCCHHHHHHHHhh
Confidence            9999854432222 233466788888888765 4456666654

The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro

>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family

Probab=100.00  E-value=2.2e-30  Score=237.54  Aligned_cols=306  Identities=24%  Similarity=0.332  Sum_probs=240.6

Q ss_pred             eeEEEec---CCceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCCCCCCC
Q 017916           19 MAAWLLG---VNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTL   95 (364)
Q Consensus        19 ~~~~~~~---~~~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~   95 (364)
                      +++.+..   +..+++.+.+.|.+++++|+|||.++++|+.|+....+.+...  ..+|.++|+|++|+|+.+|+++.++
T Consensus         2 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~i~v~~~~~~~~d~~~~~~~~~~~--~~~~~~~g~e~~G~v~~vg~~~~~~   79 (325)
T TIGR02824         2 KAIEITEPGGPEVLVLVEVPLPVPKAGEVLIRVAAAGVNRPDLLQRAGKYPPP--PGASDILGLEVAGEVVAVGEGVSRW   79 (325)
T ss_pred             ceEEEccCCCcccceEEeCCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCC--CCCCCCccceeEEEEEEeCCCCCCC
Confidence            4555443   3457777777777899999999999999999988776543221  2357899999999999999999999


Q ss_pred             CCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCccchhhhh-hhHHHHHHH
Q 017916           96 VPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHAC  174 (364)
Q Consensus        96 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~lP~~~~~~~aa~~~-~~~~a~~~l  174 (364)
                      ++||+|+++.                            .+|+|++|+.++.++++++|+++++..++.+. .+.++|+++
T Consensus        80 ~~Gd~V~~~~----------------------------~~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~~  131 (325)
T TIGR02824        80 KVGDRVCALV----------------------------AGGGYAEYVAVPAGQVLPVPEGLSLVEAAALPETFFTVWSNL  131 (325)
T ss_pred             CCCCEEEEcc----------------------------CCCcceeEEEecHHHcEeCCCCCCHHHHHhhhHHHHHHHHHH
Confidence            9999998751                            34899999999999999999999988777554 888999886


Q ss_pred             -HHcCCCCCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcC
Q 017916          175 -RRANIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMG  252 (364)
Q Consensus       175 -~~~~~~~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~  252 (364)
                       +...++++++++|+|+ |++|++++++++.+|++ ++++..++++.++++.+|++.+++.  ...++.+.++...  .+
T Consensus       132 ~~~~~~~~~~~vlv~g~~~~~g~~~~~~a~~~g~~-v~~~~~~~~~~~~~~~~g~~~~~~~--~~~~~~~~~~~~~--~~  206 (325)
T TIGR02824       132 FQRGGLKAGETVLIHGGASGIGTTAIQLAKAFGAR-VFTTAGSDEKCAACEALGADIAINY--REEDFVEVVKAET--GG  206 (325)
T ss_pred             HHhcCCCCCCEEEEEcCcchHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHcCCcEEEec--CchhHHHHHHHHc--CC
Confidence             5688999999999997 99999999999999994 6677778888888888998766553  2345555555443  24


Q ss_pred             CCccEEEECCCCHHHHHHHHHhcccCCEEEEEcCCC-CCccccchhhhhcCcEEEeeccCC-----------CcHHHHHH
Q 017916          253 TGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGH-HEMTVPLTPAAVREVDVVGVFRYK-----------NTWPLCLE  320 (364)
Q Consensus       253 ~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~  320 (364)
                      +++|+++|++|+ .....++++++++|+++.++... .........+..+++++.+.....           ..+.++++
T Consensus       207 ~~~d~~i~~~~~-~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  285 (325)
T TIGR02824       207 KGVDVILDIVGG-SYLNRNIKALALDGRIVQIGFQGGRKAELDLGPLLAKRLTITGSTLRARPVAEKAAIAAELREHVWP  285 (325)
T ss_pred             CCeEEEEECCch-HHHHHHHHhhccCcEEEEEecCCCCcCCCChHHHHhcCCEEEEEehhhcchhhhHHHHHHHHHHHHH
Confidence            579999999994 57788999999999999998532 112334444557888888765321           23466788


Q ss_pred             HHHcCCCCCCCceEEEeeCChhhHHHHHHHHhcCCCceEEEEeC
Q 017916          321 LLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  364 (364)
Q Consensus       321 ~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  364 (364)
                      +++++.+  .+...+.|++  ++++++++.+.++...||+++++
T Consensus       286 ~~~~~~l--~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~v~~~  325 (325)
T TIGR02824       286 LLASGRV--RPVIDKVFPL--EDAAQAHALMESGDHIGKIVLTV  325 (325)
T ss_pred             HHHCCcc--cCccccEEeH--HHHHHHHHHHHhCCCcceEEEeC
Confidence            8889887  4456778888  99999999999888899999875

Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.

>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=1.7e-29  Score=231.88  Aligned_cols=311  Identities=28%  Similarity=0.396  Sum_probs=240.6

Q ss_pred             eeEEEec---CCceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCCCCCCC
Q 017916           19 MAAWLLG---VNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTL   95 (364)
Q Consensus        19 ~~~~~~~---~~~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~   95 (364)
                      +++.+..   +..+++.+.+.|.+.+++|+|+|.++++|+.|+....+.+...  ...|.++|+|++|+|+.+|+++.+|
T Consensus         2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~~~~~~~--~~~~~~~g~e~~G~v~~~G~~~~~~   79 (328)
T cd08268           2 RAVRFHQFGGPEVLRIEELPVPAPGAGEVLIRVEAIGLNRADAMFRRGAYIEP--PPLPARLGYEAAGVVEAVGAGVTGF   79 (328)
T ss_pred             eEEEEeccCCcceeEEeecCCCCCCCCeEEEEEEEEecChHHhheeccccCCC--CCCCCCCCcceEEEEEeeCCCCCcC
Confidence            4555553   3467777888888899999999999999999988776644221  3457899999999999999999999


Q ss_pred             CCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCccchhhh-hhhHHHHHHH
Q 017916           96 VPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMC-EPLSVGLHAC  174 (364)
Q Consensus        96 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~lP~~~~~~~aa~~-~~~~~a~~~l  174 (364)
                      ++||+|++++...                       ....|++++|+.++.++++++|+++++.+++.+ ..+.++|+++
T Consensus        80 ~~Gd~V~~~~~~~-----------------------~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~  136 (328)
T cd08268          80 AVGDRVSVIPAAD-----------------------LGQYGTYAEYALVPAAAVVKLPDGLSFVEAAALWMQYLTAYGAL  136 (328)
T ss_pred             CCCCEEEeccccc-----------------------cCCCccceEEEEechHhcEeCCCCCCHHHHHHhhhHHHHHHHHH
Confidence            9999999863211                       124589999999999999999999998887755 4888999998


Q ss_pred             H-HcCCCCCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcC
Q 017916          175 R-RANIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMG  252 (364)
Q Consensus       175 ~-~~~~~~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~  252 (364)
                      . ...+.++++|+|+|+ |.+|++++++++..|+ .++.++.++++.+.++++|.+.+++.+.  .++.+.+....  .+
T Consensus       137 ~~~~~~~~~~~vli~g~~~~~g~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~~~~~~~--~~  211 (328)
T cd08268         137 VELAGLRPGDSVLITAASSSVGLAAIQIANAAGA-TVIATTRTSEKRDALLALGAAHVIVTDE--EDLVAEVLRIT--GG  211 (328)
T ss_pred             HHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHcCCCEEEecCC--ccHHHHHHHHh--CC
Confidence            4 588899999999998 9999999999999999 4666777888888888889877766432  45555555443  24


Q ss_pred             CCccEEEECCCCHHHHHHHHHhcccCCEEEEEcCCCCC-ccccchhhhhcCcEEEeeccC---------CCcHHHHHHHH
Q 017916          253 TGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHE-MTVPLTPAAVREVDVVGVFRY---------KNTWPLCLELL  322 (364)
Q Consensus       253 ~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~l  322 (364)
                      .++|++|+++|+ ......+++++++|+++.++..... ........+.+++.+.+....         ...++.+.+++
T Consensus       212 ~~~d~vi~~~~~-~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  290 (328)
T cd08268         212 KGVDVVFDPVGG-PQFAKLADALAPGGTLVVYGALSGEPTPFPLKAALKKSLTFRGYSLDEITLDPEARRRAIAFILDGL  290 (328)
T ss_pred             CCceEEEECCch-HhHHHHHHhhccCCEEEEEEeCCCCCCCCchHHHhhcCCEEEEEecccccCCHHHHHHHHHHHHHHH
Confidence            579999999995 6778899999999999999854321 222333346677777665432         22455666677


Q ss_pred             HcCCCCCCCceEEEeeCChhhHHHHHHHHhcCCCceEEEEeC
Q 017916          323 RSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  364 (364)
Q Consensus       323 ~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  364 (364)
                      .++.+  .+.....|++  +++.++++.+.++...||++++.
T Consensus       291 ~~~~~--~~~~~~~~~~--~~~~~~~~~~~~~~~~~~vv~~~  328 (328)
T cd08268         291 ASGAL--KPVVDRVFPF--DDIVEAHRYLESGQQIGKIVVTP  328 (328)
T ss_pred             HCCCC--cCCcccEEcH--HHHHHHHHHHHcCCCCceEEEeC
Confidence            78877  4446677888  99999999999888889999864

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08241 QOR1 Quinone oxidoreductase (QOR)

Probab=100.00  E-value=1.2e-29  Score=232.47  Aligned_cols=305  Identities=31%  Similarity=0.493  Sum_probs=240.4

Q ss_pred             ceeEEEe---cCCceEEEEecCCCCC-CCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCCCCC
Q 017916           18 NMAAWLL---GVNTLKIQPFELPSLG-PYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVK   93 (364)
Q Consensus        18 ~~~~~~~---~~~~~~~~~~~~p~~~-~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~   93 (364)
                      |+++++.   .+..+++.+.+ |.+. +++++|++.++++|+.|+....|.+..  ....|.++|+|++|+|+.+|+++.
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~--~~~~~~~~g~e~~G~v~~~g~~~~   77 (323)
T cd08241           1 MKAVVCKELGGPEDLVLEEVP-PEPGAPGEVRIRVEAAGVNFPDLLMIQGKYQV--KPPLPFVPGSEVAGVVEAVGEGVT   77 (323)
T ss_pred             CeEEEEecCCCcceeEEecCC-CCCCCCCeEEEEEEEEecCHHHHHHHcCCCCC--CCCCCCcccceeEEEEEEeCCCCC
Confidence            3567765   23567777777 6655 599999999999999999887664321  123467899999999999999999


Q ss_pred             CCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCccchhhh-hhhHHHHH
Q 017916           94 TLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMC-EPLSVGLH  172 (364)
Q Consensus        94 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~lP~~~~~~~aa~~-~~~~~a~~  172 (364)
                      .+++||+|++++                            ..|+|++|+.++.++++++|++++..+++.+ ..+.+|++
T Consensus        78 ~~~~G~~V~~~~----------------------------~~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~a~~  129 (323)
T cd08241          78 GFKVGDRVVALT----------------------------GQGGFAEEVVVPAAAVFPLPDGLSFEEAAALPVTYGTAYH  129 (323)
T ss_pred             CCCCCCEEEEec----------------------------CCceeEEEEEcCHHHceeCCCCCCHHHHhhhhhHHHHHHH
Confidence            999999999752                            2489999999999999999999998877755 48888999


Q ss_pred             HHH-HcCCCCCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHH
Q 017916          173 ACR-RANIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKA  250 (364)
Q Consensus       173 ~l~-~~~~~~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~  250 (364)
                      ++. ..+++++++|+|+|+ |.+|++++++|+..|++ +++++.++++.+.++++|++..++..  ..++.+.++...  
T Consensus       130 ~~~~~~~~~~~~~vli~g~~~~~g~~~~~~a~~~g~~-v~~~~~~~~~~~~~~~~g~~~~~~~~--~~~~~~~i~~~~--  204 (323)
T cd08241         130 ALVRRARLQPGETVLVLGAAGGVGLAAVQLAKALGAR-VIAAASSEEKLALARALGADHVIDYR--DPDLRERVKALT--  204 (323)
T ss_pred             HHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHhCCE-EEEEeCCHHHHHHHHHcCCceeeecC--CccHHHHHHHHc--
Confidence            885 688999999999998 99999999999999995 77777788888888889987766533  345666665543  


Q ss_pred             cCCCccEEEECCCCHHHHHHHHHhcccCCEEEEEcCCCCCcc-ccchhhhhcCcEEEeeccC----------CCcHHHHH
Q 017916          251 MGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMT-VPLTPAAVREVDVVGVFRY----------KNTWPLCL  319 (364)
Q Consensus       251 ~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~----------~~~~~~~~  319 (364)
                      .+.++|+++|++|+ .....++++++++|+++.++....... +.......+++++.+....          .+.+.+++
T Consensus       205 ~~~~~d~v~~~~g~-~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  283 (323)
T cd08241         205 GGRGVDVVYDPVGG-DVFEASLRSLAWGGRLLVIGFASGEIPQIPANLLLLKNISVVGVYWGAYARREPELLRANLAELF  283 (323)
T ss_pred             CCCCcEEEEECccH-HHHHHHHHhhccCCEEEEEccCCCCcCcCCHHHHhhcCcEEEEEecccccchhHHHHHHHHHHHH
Confidence            24579999999994 788889999999999999985433222 2223445677777776432          24567889


Q ss_pred             HHHHcCCCCCCCceEEEeeCChhhHHHHHHHHhcCCCceEEEEe
Q 017916          320 ELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFN  363 (364)
Q Consensus       320 ~~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~  363 (364)
                      +++.++.+  .+.....|++  +++.++++.+.++...+|++++
T Consensus       284 ~~~~~~~~--~~~~~~~~~~--~~~~~~~~~~~~~~~~~~vvv~  323 (323)
T cd08241         284 DLLAEGKI--RPHVSAVFPL--EQAAEALRALADRKATGKVVLT  323 (323)
T ss_pred             HHHHCCCc--ccccceEEcH--HHHHHHHHHHHhCCCCCcEEeC
Confidence            99999987  4556788888  9999999999888888898874

QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic

>cd05289 MDR_like_2 alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases

Probab=100.00  E-value=3.7e-30  Score=234.39  Aligned_cols=301  Identities=28%  Similarity=0.368  Sum_probs=231.2

Q ss_pred             ceeEEEecCC---ceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCCCCCC
Q 017916           18 NMAAWLLGVN---TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT   94 (364)
Q Consensus        18 ~~~~~~~~~~---~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~   94 (364)
                      |+++++..+.   .+++.+.+.|.+++++|+|||.++++|+.|+....|..........|.++|+|++|+|+.+|+++++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~~   80 (309)
T cd05289           1 MKAVRIHEYGGPEVLELADVPTPEPGPGEVLVKVHAAGVNPVDLKIREGLLKAAFPLTLPLIPGHDVAGVVVAVGPGVTG   80 (309)
T ss_pred             CceEEEcccCCccceeecccCCCCCCCCeEEEEEEEeeCCHHHHHHhcCCccccCCCCCCCccccceeEEEEeeCCCCCC
Confidence            4566666433   3566777778889999999999999999999887764321122345889999999999999999999


Q ss_pred             CCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCccchhhhh-hhHHHHHH
Q 017916           95 LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHA  173 (364)
Q Consensus        95 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~lP~~~~~~~aa~~~-~~~~a~~~  173 (364)
                      +++||+|++.+..                         ...|+|++|+.++.++++++|+++++..++.+. .+.+++++
T Consensus        81 ~~~G~~V~~~~~~-------------------------~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~  135 (309)
T cd05289          81 FKVGDEVFGMTPF-------------------------TRGGAYAEYVVVPADELALKPANLSFEEAAALPLAGLTAWQA  135 (309)
T ss_pred             CCCCCEEEEccCC-------------------------CCCCcceeEEEecHHHhccCCCCCCHHHHHhhhHHHHHHHHH
Confidence            9999999976310                         125899999999999999999999988877665 77889988


Q ss_pred             HHH-cCCCCCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHc
Q 017916          174 CRR-ANIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAM  251 (364)
Q Consensus       174 l~~-~~~~~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~  251 (364)
                      +.. ..+.+|++|+|+|+ |.+|++++++++..|++ +++++.++ +.++++++|++.+++...  .++.+      ...
T Consensus       136 ~~~~~~~~~~~~vlv~g~~g~~g~~~~~~a~~~g~~-v~~~~~~~-~~~~~~~~g~~~~~~~~~--~~~~~------~~~  205 (309)
T cd05289         136 LFELGGLKAGQTVLIHGAAGGVGSFAVQLAKARGAR-VIATASAA-NADFLRSLGADEVIDYTK--GDFER------AAA  205 (309)
T ss_pred             HHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCE-EEEEecch-hHHHHHHcCCCEEEeCCC--Cchhh------ccC
Confidence            855 56899999999997 99999999999999995 55555565 778888899877665432  23222      123


Q ss_pred             CCCccEEEECCCCHHHHHHHHHhcccCCEEEEEcCCCCCccccchhhhhcCcEEEeeccC--CCcHHHHHHHHHcCCCCC
Q 017916          252 GTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY--KNTWPLCLELLRSGKIDV  329 (364)
Q Consensus       252 ~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~g~~~~  329 (364)
                      +.++|+++|++|+ ......+++++++|+++.++.......    ....+++++......  .+.+.+++++++++.+  
T Consensus       206 ~~~~d~v~~~~~~-~~~~~~~~~l~~~g~~v~~g~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--  278 (309)
T cd05289         206 PGGVDAVLDTVGG-ETLARSLALVKPGGRLVSIAGPPPAEQ----AAKRRGVRAGFVFVEPDGEQLAELAELVEAGKL--  278 (309)
T ss_pred             CCCceEEEECCch-HHHHHHHHHHhcCcEEEEEcCCCcchh----hhhhccceEEEEEecccHHHHHHHHHHHHCCCE--
Confidence            4679999999995 577899999999999999975432111    222344444433222  4678889999999987  


Q ss_pred             CCceEEEeeCChhhHHHHHHHHhcCCCceEEEE
Q 017916          330 KPLVTHRFGFSQKEVEEAFETSARGGTAIKVMF  362 (364)
Q Consensus       330 ~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv  362 (364)
                      .+.+.+.|++  ++++++++.+..+...+|+++
T Consensus       279 ~~~~~~~~~~--~~~~~a~~~~~~~~~~~kvv~  309 (309)
T cd05289         279 RPVVDRVFPL--EDAAEAHERLESGHARGKVVL  309 (309)
T ss_pred             EEeeccEEcH--HHHHHHHHHHHhCCCCCcEeC
Confidence            4556788888  999999999998877888874

Members identified as zinc-dependent alcohol dehydrogenases and quinone oxidoreductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts et

>cd08275 MDR3 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=2.4e-29  Score=232.11  Aligned_cols=296  Identities=29%  Similarity=0.382  Sum_probs=232.6

Q ss_pred             CceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCCCCCCCCCCCEEEEcCC
Q 017916           27 NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPG  106 (364)
Q Consensus        27 ~~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~  106 (364)
                      ..+.+.+.+.|.+.+++|+||+.++++|+.|+....|.+..  ....|.++|+|++|+|+.+|+++.++++||+|+++. 
T Consensus        12 ~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~--~~~~~~~~g~e~~G~v~~~g~~~~~~~~G~~V~~~~-   88 (337)
T cd08275          12 DKLKVEKEALPEPSSGEVRVRVEACGLNFADLMARQGLYDS--APKPPFVPGFECAGTVEAVGEGVKDFKVGDRVMGLT-   88 (337)
T ss_pred             cceEEEecCCCCCCCCEEEEEEEEEecCHHHHHHHCCCCCC--CCCCCCCCcceeEEEEEEECCCCcCCCCCCEEEEec-
Confidence            36777788888889999999999999999999887764322  134577899999999999999999999999999751 


Q ss_pred             cCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCccchhhhh-hhHHHHHHH-HHcCCCCCCE
Q 017916          107 ISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHAC-RRANIGPETN  184 (364)
Q Consensus       107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~lP~~~~~~~aa~~~-~~~~a~~~l-~~~~~~~g~~  184 (364)
                                                 ..|+|++|+.++.++++++|+++++.+++.+. .+.++|+++ +..++++|++
T Consensus        89 ---------------------------~~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~  141 (337)
T cd08275          89 ---------------------------RFGGYAEVVNVPADQVFPLPDGMSFEEAAAFPVNYLTAYYALFELGNLRPGQS  141 (337)
T ss_pred             ---------------------------CCCeeeeEEEecHHHeEECCCCCCHHHHhhhhHHHHHHHHHHHHhhCCCCCCE
Confidence                                       24899999999999999999999988877665 888999998 4588999999


Q ss_pred             EEEEcC-CHHHHHHHHHHHHCCCCEEEEEe-cChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcCCCccEEEECC
Q 017916          185 VLIMGA-GPIGLVTMLGARAFGAPRIVIVD-VDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCA  262 (364)
Q Consensus       185 VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~-~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid~~  262 (364)
                      |+|+|+ |.+|++++++|+.+ . .+.++. ..+++.+.++.+|++.+++..  ..++.+.++.+.   ++++|+++||+
T Consensus       142 vli~g~~g~~g~~~~~~a~~~-~-~~~~~~~~~~~~~~~~~~~g~~~~~~~~--~~~~~~~~~~~~---~~~~d~v~~~~  214 (337)
T cd08275         142 VLVHSAAGGVGLAAGQLCKTV-P-NVTVVGTASASKHEALKENGVTHVIDYR--TQDYVEEVKKIS---PEGVDIVLDAL  214 (337)
T ss_pred             EEEEcCcchHHHHHHHHHHHc-c-CcEEEEeCCHHHHHHHHHcCCcEEeeCC--CCcHHHHHHHHh---CCCceEEEECC
Confidence            999998 99999999999998 2 233332 345577888889987766643  356666666654   46799999999


Q ss_pred             CCHHHHHHHHHhcccCCEEEEEcCCCCCc--cc---------------cchhhhhcCcEEEeeccC---------CCcHH
Q 017916          263 GFNKTMSTALSATRAGGKVCLVGMGHHEM--TV---------------PLTPAAVREVDVVGVFRY---------KNTWP  316 (364)
Q Consensus       263 g~~~~~~~~~~~l~~~G~~v~~g~~~~~~--~~---------------~~~~~~~~~~~~~~~~~~---------~~~~~  316 (364)
                      |+ .....++++++++|+++.+|......  ..               .......+++++.+....         ...+.
T Consensus       215 g~-~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  293 (337)
T cd08275         215 GG-EDTRKSYDLLKPMGRLVVYGAANLVTGEKRSWFKLAKKWWNRPKVDPMKLISENKSVLGFNLGWLFEERELLTEVMD  293 (337)
T ss_pred             cH-HHHHHHHHhhccCcEEEEEeecCCcCcccccccccccccccccccCHHHHhhcCceEEEeechhhhhChHHHHHHHH
Confidence            94 57788999999999999997432210  11               112345667777665421         12467


Q ss_pred             HHHHHHHcCCCCCCCceEEEeeCChhhHHHHHHHHhcCCCceEEEEeC
Q 017916          317 LCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  364 (364)
Q Consensus       317 ~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  364 (364)
                      ++++++.++.+  .+.....|++  ++++++++.+.++...||+++++
T Consensus       294 ~~~~~~~~~~~--~~~~~~~~~~--~~~~~~~~~~~~~~~~~kvv~~~  337 (337)
T cd08275         294 KLLKLYEEGKI--KPKIDSVFPF--EEVGEAMRRLQSRKNIGKVVLTP  337 (337)
T ss_pred             HHHHHHHCCCC--CCceeeEEcH--HHHHHHHHHHHcCCCcceEEEeC
Confidence            78889999987  4556678888  99999999999988899999874

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08267 MDR1 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.98  E-value=4.8e-30  Score=234.94  Aligned_cols=295  Identities=27%  Similarity=0.329  Sum_probs=222.5

Q ss_pred             EEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCC
Q 017916           30 KIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISC  109 (364)
Q Consensus        30 ~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~  109 (364)
                      ++.+.+.|++++++|+|++.++++|+.|+....|.+........|..+|+|++|+|.++|++++++++||+|++....  
T Consensus        15 ~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~--   92 (319)
T cd08267          15 LEVEVPIPTPKPGEVLVKVHAASVNPVDWKLRRGPPKLLLGRPFPPIPGMDFAGEVVAVGSGVTRFKVGDEVFGRLPP--   92 (319)
T ss_pred             ccccCCCCCCCCCEEEEEEEEeeCCHHHHHHHcCCCcccccCCCCCcccceeeEEEEEeCCCCCCCCCCCEEEEeccC--
Confidence            778889999999999999999999999998877644211112356789999999999999999999999999876321  


Q ss_pred             CCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCccchhhhh-hhHHHHHHHHH-cCCCCCCEEEE
Q 017916          110 WRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHACRR-ANIGPETNVLI  187 (364)
Q Consensus       110 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~lP~~~~~~~aa~~~-~~~~a~~~l~~-~~~~~g~~VLI  187 (364)
                                             ...|+|++|+.++.+.++++|++++..+++.+. .+.+||++++. .++++|++|+|
T Consensus        93 -----------------------~~~g~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~vli  149 (319)
T cd08267          93 -----------------------KGGGALAEYVVAPESGLAKKPEGVSFEEAAALPVAGLTALQALRDAGKVKPGQRVLI  149 (319)
T ss_pred             -----------------------CCCceeeEEEEechhheEECCCCCCHHHHHhhhhHHHHHHHHHHHhcCCCCCCEEEE
Confidence                                   135899999999999999999999988877664 78899999865 56899999999


Q ss_pred             EcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcCCCccEEEECCCC-H
Q 017916          188 MGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGF-N  265 (364)
Q Consensus       188 ~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid~~g~-~  265 (364)
                      +|+ |.+|++++++|+.+|++ +++++.+ ++.++++++|++++++...  .++.   +  ....++++|+++||+|+ .
T Consensus       150 ~g~~g~~g~~~~~la~~~g~~-v~~~~~~-~~~~~~~~~g~~~~~~~~~--~~~~---~--~~~~~~~~d~vi~~~~~~~  220 (319)
T cd08267         150 NGASGGVGTFAVQIAKALGAH-VTGVCST-RNAELVRSLGADEVIDYTT--EDFV---A--LTAGGEKYDVIFDAVGNSP  220 (319)
T ss_pred             EcCCcHHHHHHHHHHHHcCCE-EEEEeCH-HHHHHHHHcCCCEeecCCC--CCcc---h--hccCCCCCcEEEECCCchH
Confidence            998 99999999999999994 6666554 7888889999877766433  2332   1  12235679999999984 2


Q ss_pred             HHHHHHHHhcccCCEEEEEcCCCCCccccc-----hh-hhhcCcEEEeeccCCCcHHHHHHHHHcCCCCCCCceEEEeeC
Q 017916          266 KTMSTALSATRAGGKVCLVGMGHHEMTVPL-----TP-AAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGF  339 (364)
Q Consensus       266 ~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~-----~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~  339 (364)
                      ......+..++++|+++.+|..........     .. ...+.+.........+.+.++++++.++.+  .+.+.+.|++
T Consensus       221 ~~~~~~~~~l~~~g~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~  298 (319)
T cd08267         221 FSLYRASLALKPGGRYVSVGGGPSGLLLVLLLLPLTLGGGGRRLKFFLAKPNAEDLEQLAELVEEGKL--KPVIDSVYPL  298 (319)
T ss_pred             HHHHHhhhccCCCCEEEEeccccccccccccccchhhccccceEEEEEecCCHHHHHHHHHHHHCCCe--eeeeeeEEcH
Confidence            233344445999999999985432211111     11 112222222222225678899999999987  4557788888


Q ss_pred             ChhhHHHHHHHHhcCCCceEEEE
Q 017916          340 SQKEVEEAFETSARGGTAIKVMF  362 (364)
Q Consensus       340 ~~~~~~~a~~~~~~~~~~gkvvv  362 (364)
                        +++++|++.+.++...+|+++
T Consensus       299 --~~i~~a~~~~~~~~~~~~vvv  319 (319)
T cd08267         299 --EDAPEAYRRLKSGRARGKVVI  319 (319)
T ss_pred             --HHHHHHHHHHhcCCCCCcEeC
Confidence              999999999998888888874

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd05195 enoyl_red enoyl reductase of polyketide synthase

Probab=99.97  E-value=9.6e-29  Score=222.83  Aligned_cols=276  Identities=26%  Similarity=0.325  Sum_probs=218.2

Q ss_pred             CcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCCccccCCCCC
Q 017916           42 YDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYN  121 (364)
Q Consensus        42 ~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~  121 (364)
                      +||+|||.++++|+.|+....|.+     ..+|.++|+|++|+|+++|+++.++++||+|++.                 
T Consensus         1 ~~v~i~v~~~~~~~~d~~~~~g~~-----~~~~~~~g~e~~G~v~~~g~~~~~~~~Gd~V~~~-----------------   58 (293)
T cd05195           1 DEVEVEVKAAGLNFRDVLVALGLL-----PGDETPLGLECSGIVTRVGSGVTGLKVGDRVMGL-----------------   58 (293)
T ss_pred             CceEEEEEEEecCHHHHHHHhCCC-----CCCCCccceeeeEEEEeecCCccCCCCCCEEEEE-----------------
Confidence            589999999999999999887643     2457899999999999999999999999999875                 


Q ss_pred             CCCCccccccCCCCCcceeEEEecCCceEECCCCCCccchhhh-hhhHHHHHHH-HHcCCCCCCEEEEEcC-CHHHHHHH
Q 017916          122 LCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMC-EPLSVGLHAC-RRANIGPETNVLIMGA-GPIGLVTM  198 (364)
Q Consensus       122 ~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~lP~~~~~~~aa~~-~~~~~a~~~l-~~~~~~~g~~VLI~Ga-g~~G~~ai  198 (364)
                                  ..|+|++|+.++.+.++++|+++++.+++.+ ..+.+++.++ +...+++|++|+|+|+ |.+|++++
T Consensus        59 ------------~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~vlv~g~~g~~g~~~~  126 (293)
T cd05195          59 ------------APGAFATHVRVDARLVVKIPDSLSFEEAATLPVAYLTAYYALVDLARLQKGESVLIHAAAGGVGQAAI  126 (293)
T ss_pred             ------------ecCcccceEEechhheEeCCCCCCHHHHhhchHHHHHHHHHHHHHhccCCCCEEEEecCCCHHHHHHH
Confidence                        2489999999999999999999998888866 4888899888 4588999999999986 99999999


Q ss_pred             HHHHHCCCCEEEEEecChhHHHHHHHcC--CCeEEecCCCcccHHHHHHHHHHHcCCCccEEEECCCCHHHHHHHHHhcc
Q 017916          199 LGARAFGAPRIVIVDVDDYRLSVAKELG--ADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATR  276 (364)
Q Consensus       199 ~la~~~g~~~vv~~~~~~~~~~~~~~lg--~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~  276 (364)
                      |+|+.+|+ .++.+..++++.+.++.++  ++.+++..  ..++.+.++...  .+.++|++||++|+. .....+++++
T Consensus       127 ~~a~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~--~~~~~d~vi~~~~~~-~~~~~~~~l~  200 (293)
T cd05195         127 QLAQHLGA-EVFATVGSEEKREFLRELGGPVDHIFSSR--DLSFADGILRAT--GGRGVDVVLNSLSGE-LLRASWRCLA  200 (293)
T ss_pred             HHHHHcCC-EEEEEeCCHHHHHHHHHhCCCcceEeecC--chhHHHHHHHHh--CCCCceEEEeCCCch-HHHHHHHhcc
Confidence            99999999 5777777888888888887  56666532  345666665553  256899999999965 8899999999


Q ss_pred             cCCEEEEEcCCCCC--ccccchhhhhcCcEEEeeccC----------CCcHHHHHHHHHcCCCCCCCceEEEeeCChhhH
Q 017916          277 AGGKVCLVGMGHHE--MTVPLTPAAVREVDVVGVFRY----------KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEV  344 (364)
Q Consensus       277 ~~G~~v~~g~~~~~--~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~  344 (364)
                      ++|+++.++.....  ....... ..+++.+......          .+.+.++++++.++.+  .+.....|.+  +++
T Consensus       201 ~~g~~v~~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~--~~~  275 (293)
T cd05195         201 PFGRFVEIGKRDILSNSKLGMRP-FLRNVSFSSVDLDQLARERPELLRELLREVLELLEAGVL--KPLPPTVVPS--ASE  275 (293)
T ss_pred             cCceEEEeeccccccCCccchhh-hccCCeEEEEeHHHHhhhChHHHHHHHHHHHHHHHCCCc--ccCCCeeech--hhH
Confidence            99999999853321  1122222 2234444432211          2356788899999987  5556677788  899


Q ss_pred             HHHHHHHhcCCCceEEEE
Q 017916          345 EEAFETSARGGTAIKVMF  362 (364)
Q Consensus       345 ~~a~~~~~~~~~~gkvvv  362 (364)
                      .++++.+.++...||+++
T Consensus       276 ~~a~~~~~~~~~~~~ivv  293 (293)
T cd05195         276 IDAFRLMQSGKHIGKVVL  293 (293)
T ss_pred             HHHHHHHhcCCCCceecC
Confidence            999999998888888874

Putative enoyl reductase of polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase

>smart00829 PKS_ER Enoylreductase

Probab=99.97  E-value=3.9e-28  Score=218.60  Aligned_cols=272  Identities=29%  Similarity=0.397  Sum_probs=215.0

Q ss_pred             EEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCC
Q 017916           45 LVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCP  124 (364)
Q Consensus        45 lV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~  124 (364)
                      .|||.++++|+.|+....|.+      ..|.++|+|++|+|+.+|++++.|++||+|++.                    
T Consensus         1 ~i~v~~~~i~~~d~~~~~g~~------~~~~~~g~e~~G~v~~~G~~~~~~~~Gd~V~~~--------------------   54 (288)
T smart00829        1 EVEVRAAGLNFRDVLIALGLL------PGEAVLGGECAGVVTRVGPGVTGLAVGDRVMGL--------------------   54 (288)
T ss_pred             CeeEEEEecCHHHHHHhcCCC------CCCCCCCceeEEEEEeeCCCCcCCCCCCEEEEE--------------------
Confidence            389999999999999887643      236789999999999999999999999999875                    


Q ss_pred             CccccccCCCCCcceeEEEecCCceEECCCCCCccchhhhh-hhHHHHHHH-HHcCCCCCCEEEEEcC-CHHHHHHHHHH
Q 017916          125 EMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHAC-RRANIGPETNVLIMGA-GPIGLVTMLGA  201 (364)
Q Consensus       125 ~~~~~~~~~~~g~~~~~v~~~~~~~~~lP~~~~~~~aa~~~-~~~~a~~~l-~~~~~~~g~~VLI~Ga-g~~G~~ai~la  201 (364)
                               ..|+|++|+.++.++++++|+++++.+++.+. .+.++++++ +...+.+|++|+|+|+ |.+|++++++|
T Consensus        55 ---------~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~vlv~g~~~~~g~~~~~~a  125 (288)
T smart00829       55 ---------APGSFATYVRTDARLVVPIPDGLSFEEAATVPVVFLTAYYALVDLARLRPGESVLIHAAAGGVGQAAIQLA  125 (288)
T ss_pred             ---------cCCceeeEEEccHHHeEECCCCCCHHHHHhchHHHHHHHHHHHHHhCCCCCCEEEEecCCcHHHHHHHHHH
Confidence                     24899999999999999999999998888765 788899988 6688999999999986 99999999999


Q ss_pred             HHCCCCEEEEEecChhHHHHHHHcCC--CeEEecCCCcccHHHHHHHHHHHcCCCccEEEECCCCHHHHHHHHHhcccCC
Q 017916          202 RAFGAPRIVIVDVDDYRLSVAKELGA--DNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGG  279 (364)
Q Consensus       202 ~~~g~~~vv~~~~~~~~~~~~~~lg~--~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G  279 (364)
                      +.+|+ .+++++.++++.++++++|+  +.++++.  ..++.+.+++..  .++++|+++|++| .......+++++++|
T Consensus       126 ~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~~--~~~~~~~~~~~~--~~~~~d~vi~~~~-~~~~~~~~~~l~~~g  199 (288)
T smart00829      126 QHLGA-EVFATAGSPEKRDFLRELGIPDDHIFSSR--DLSFADEILRAT--GGRGVDVVLNSLA-GEFLDASLRCLAPGG  199 (288)
T ss_pred             HHcCC-EEEEEeCCHHHHHHHHHcCCChhheeeCC--CccHHHHHHHHh--CCCCcEEEEeCCC-HHHHHHHHHhccCCc
Confidence            99999 57777788889999999998  6666543  345666665543  2457999999999 578889999999999


Q ss_pred             EEEEEcCCCC--CccccchhhhhcCcEEEeecc---------CCCcHHHHHHHHHcCCCCCCCceEEEeeCChhhHHHHH
Q 017916          280 KVCLVGMGHH--EMTVPLTPAAVREVDVVGVFR---------YKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAF  348 (364)
Q Consensus       280 ~~v~~g~~~~--~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~a~  348 (364)
                      +++.++....  ........ ..+++++.+...         ..+.+.+++++++++++.  +...+.|++  +++++++
T Consensus       200 ~~v~~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~--~~~~~~~  274 (288)
T smart00829      200 RFVEIGKRDIRDNSQLGMAP-FRRNVSYHAVDLDALEEGPDRIRELLAEVLELFAEGVLR--PLPVTVFPI--SDVEDAF  274 (288)
T ss_pred             EEEEEcCcCCccccccchhh-hcCCceEEEEEHHHhhcChHHHHHHHHHHHHHHHCCCcc--CcCceEEcH--HHHHHHH
Confidence            9999985421  11122222 234455444321         123467788899999874  334577888  9999999


Q ss_pred             HHHhcCCCceEEEE
Q 017916          349 ETSARGGTAIKVMF  362 (364)
Q Consensus       349 ~~~~~~~~~gkvvv  362 (364)
                      +.+..+...||+++
T Consensus       275 ~~~~~~~~~~~ivv  288 (288)
T smart00829      275 RYMQQGKHIGKVVL  288 (288)
T ss_pred             HHHhcCCCcceEeC
Confidence            99998877788774

Enoylreductase in Polyketide synthases.

>cd08255 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_like 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide and other MDR family members

Probab=99.97  E-value=3.5e-28  Score=218.42  Aligned_cols=246  Identities=30%  Similarity=0.416  Sum_probs=196.4

Q ss_pred             cCCCCcccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCce
Q 017916           70 VVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLC  149 (364)
Q Consensus        70 ~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~  149 (364)
                      +..+|.++|+|++|+|+++|++++.|++||+|+++                               +.|++|+.++.+++
T Consensus        17 ~~~~p~v~g~e~~G~V~~vG~~v~~~~~Gd~V~~~-------------------------------~~~~~~~~v~~~~~   65 (277)
T cd08255          17 KLPLPLPPGYSSVGRVVEVGSGVTGFKPGDRVFCF-------------------------------GPHAERVVVPANLL   65 (277)
T ss_pred             cCcCCcccCcceeEEEEEeCCCCCCCCCCCEEEec-------------------------------CCcceEEEcCHHHe
Confidence            35689999999999999999999999999999875                               46899999999999


Q ss_pred             EECCCCCCccchhhhhhhHHHHHHHHHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcC-CC
Q 017916          150 FKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELG-AD  228 (364)
Q Consensus       150 ~~lP~~~~~~~aa~~~~~~~a~~~l~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg-~~  228 (364)
                      +++|+++++.+++.+..+.+||++++..++++|+++||+|+|.+|++++++|+++|++.+++++.++++.++++++| .+
T Consensus        66 ~~ip~~l~~~~aa~~~~~~ta~~~~~~~~~~~g~~vlI~g~g~vg~~~i~~a~~~g~~~vi~~~~~~~~~~~~~~~g~~~  145 (277)
T cd08255          66 VPLPDGLPPERAALTALAATALNGVRDAEPRLGERVAVVGLGLVGLLAAQLAKAAGAREVVGVDPDAARRELAEALGPAD  145 (277)
T ss_pred             eECcCCCCHHHhHHHHHHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCcEEEECCCHHHHHHHHHcCCCc
Confidence            99999999888876678889999988889999999999988999999999999999965888888999999999999 44


Q ss_pred             eEEecCCCcccHHHHHHHHHHHcCCCccEEEECCCCHHHHHHHHHhcccCCEEEEEcCCCCCccccchhhhhcCcEEEee
Q 017916          229 NIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGV  308 (364)
Q Consensus       229 ~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~  308 (364)
                      .++.+..          ..  ..+.++|++||+++........+++++++|+++.+|............+..+.+++.+.
T Consensus       146 ~~~~~~~----------~~--~~~~~~d~vl~~~~~~~~~~~~~~~l~~~g~~~~~g~~~~~~~~~~~~~~~~~~~~~~~  213 (277)
T cd08255         146 PVAADTA----------DE--IGGRGADVVIEASGSPSALETALRLLRDRGRVVLVGWYGLKPLLLGEEFHFKRLPIRSS  213 (277)
T ss_pred             cccccch----------hh--hcCCCCCEEEEccCChHHHHHHHHHhcCCcEEEEEeccCCCccccHHHHHhccCeEEee
Confidence            4433211          01  12568999999998778889999999999999999854332111112233455555554


Q ss_pred             ccC-------------CCcHHHHHHHHHcCCCCCCCceEEEeeCChhhHHHHHHHHhcC-CCceEEEE
Q 017916          309 FRY-------------KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARG-GTAIKVMF  362 (364)
Q Consensus       309 ~~~-------------~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~-~~~gkvvv  362 (364)
                      ...             .+.+++++++++++.+  .+.+.+.|++  +++++|++.++++ ....|+++
T Consensus       214 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l--~~~~~~~~~~--~~~~~a~~~~~~~~~~~~k~~~  277 (277)
T cd08255         214 QVYGIGRYDRPRRWTEARNLEEALDLLAEGRL--EALITHRVPF--EDAPEAYRLLFEDPPECLKVVL  277 (277)
T ss_pred             cccccccccccccccccccHHHHHHHHHcCCc--cccccCccCH--HHHHHHHHHHHcCCccceeeeC
Confidence            321             2568899999999987  4556677888  9999999999877 56667764

This subgroup of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family has members identified as 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase and alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MD

>KOG1196 consensus Predicted NAD-dependent oxidoreductase [General function prediction only]

Probab=99.96  E-value=1.6e-26  Score=196.95  Aligned_cols=282  Identities=17%  Similarity=0.173  Sum_probs=215.6

Q ss_pred             CCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccc----cceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCCc
Q 017916           38 SLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIG----HECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCD  113 (364)
Q Consensus        38 ~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G----~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~  113 (364)
                      ++++++|+||..|.+..|.-...+.......  --.|+.||    ..++|+|++.  +.+++++||.|++.         
T Consensus        34 ~~~s~~vlvknlYLS~DPymR~rM~~~~~~~--y~~~~~~G~pi~g~GV~kVi~S--~~~~~~~GD~v~g~---------  100 (343)
T KOG1196|consen   34 PLGSGEVLVKNLYLSCDPYMRIRMGKPDPSD--YAPPYEPGKPIDGFGVAKVIDS--GHPNYKKGDLVWGI---------  100 (343)
T ss_pred             CCCCccEEeEeeeecCCHHHHhhccCCCccc--ccCcccCCcEecCCceEEEEec--CCCCCCcCceEEEe---------
Confidence            4688999999999999887655443222111  11133333    2678999885  55789999999976         


Q ss_pred             cccCCCCCCCCCccccccCCCCCcceeEEEecCCceE--ECCC--CCCccchh--hhhhhHHHHHHH-HHcCCCCCCEEE
Q 017916          114 HCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCF--KLPD--NVSLEEGA--MCEPLSVGLHAC-RRANIGPETNVL  186 (364)
Q Consensus       114 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~--~lP~--~~~~~~aa--~~~~~~~a~~~l-~~~~~~~g~~VL  186 (364)
                                            =+|.||.+++++...  ++|.  +++.....  +-.+..|||.++ +.+..++|++|+
T Consensus       101 ----------------------~gWeeysii~~~~~~~~ki~~~~~~pLs~ylg~lGm~glTAy~Gf~ei~~pk~geTv~  158 (343)
T KOG1196|consen  101 ----------------------VGWEEYSVITPNDLEHFKIQHPTDVPLSYYLGLLGMPGLTAYAGFYEICSPKKGETVF  158 (343)
T ss_pred             ----------------------ccceEEEEecCcchhcccCCCCCccCHhhhhhccCCchhHHHHHHHHhcCCCCCCEEE
Confidence                                  379999988875444  4433  33333332  224888999998 679999999999


Q ss_pred             EEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHH-HcCCCeEEecCCCcccHHHHHHHHHHHcCCCccEEEECCCC
Q 017916          187 IMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAK-ELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGF  264 (364)
Q Consensus       187 I~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~-~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid~~g~  264 (364)
                      |.|| |++|+.+.|+|+.+|+ .|++...+++|.++++ ++|.+..+||.+. .++.+.+++.   .+.++|+.||.+| 
T Consensus       159 VSaAsGAvGql~GQ~Ak~~Gc-~VVGsaGS~EKv~ll~~~~G~d~afNYK~e-~~~~~aL~r~---~P~GIDiYfeNVG-  232 (343)
T KOG1196|consen  159 VSAASGAVGQLVGQFAKLMGC-YVVGSAGSKEKVDLLKTKFGFDDAFNYKEE-SDLSAALKRC---FPEGIDIYFENVG-  232 (343)
T ss_pred             EeeccchhHHHHHHHHHhcCC-EEEEecCChhhhhhhHhccCCccceeccCc-cCHHHHHHHh---CCCcceEEEeccC-
Confidence            9988 9999999999999999 7999999999999886 5799999998653 4777777765   3689999999999 


Q ss_pred             HHHHHHHHHhcccCCEEEEEcCCC---CCc---cccchhhhhcCcEEEeeccC------CCcHHHHHHHHHcCCCCCCCc
Q 017916          265 NKTMSTALSATRAGGKVCLVGMGH---HEM---TVPLTPAAVREVDVVGVFRY------KNTWPLCLELLRSGKIDVKPL  332 (364)
Q Consensus       265 ~~~~~~~~~~l~~~G~~v~~g~~~---~~~---~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~l~~g~~~~~~~  332 (364)
                      +..++..+..|+..||++.+|+-.   .+.   -..+..++.|++.+.++...      .+.++.+..++++|+|.....
T Consensus       233 G~~lDavl~nM~~~gri~~CG~ISqYN~~~~~~~~~l~~ii~Kr~~iqgflv~d~~d~~~k~ld~l~~~ikegKI~y~ed  312 (343)
T KOG1196|consen  233 GKMLDAVLLNMNLHGRIAVCGMISQYNLENPEGLHNLSTIIYKRIRIQGFLVSDYLDKYPKFLDFLLPYIKEGKITYVED  312 (343)
T ss_pred             cHHHHHHHHhhhhccceEeeeeehhccccCCccccchhhheeeeEEeeeEEeechhhhhHHHHHHHHHHHhcCceEEehh
Confidence            688999999999999999999521   111   12334567888888886543      566788999999999954443


Q ss_pred             eEEEeeCChhhHHHHHHHHhcCCCceEEEEeC
Q 017916          333 VTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  364 (364)
Q Consensus       333 ~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  364 (364)
                      +.  -+|  |+.++||..|..+.+.||.++.+
T Consensus       313 i~--~Gl--en~P~A~vglf~GkNvGKqiv~v  340 (343)
T KOG1196|consen  313 IA--DGL--ENGPSALVGLFHGKNVGKQLVKV  340 (343)
T ss_pred             HH--HHH--hccHHHHHHHhccCcccceEEEe
Confidence            33  247  99999999999999999999864

>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]

Probab=99.94  E-value=2.1e-26  Score=223.77  Aligned_cols=292  Identities=20%  Similarity=0.248  Sum_probs=229.2

Q ss_pred             CceEEEEecCC---CCCCCcEEEEEeeeeeCcccHhhhhhcccCCcc----CCCCcccccceeEEEEEeCCCCCCCCCCC
Q 017916           27 NTLKIQPFELP---SLGPYDVLVRMKAVGICGSDVHYLKTLRCADFV----VKEPMVIGHECAGVIEKVGSEVKTLVPGD   99 (364)
Q Consensus        27 ~~~~~~~~~~p---~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~----~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd   99 (364)
                      .+++..+.|..   +..++.=+.-|-|++||++|+-...|..+..-.    ..-..++|-||+|+-          +-|.
T Consensus      1427 sSlrWies~~~~a~~~~~~~e~CtVYYAplNFRDiMLasGkL~~DAiPG~~a~qdclLGmEFsGRd----------~~Gr 1496 (2376)
T KOG1202|consen 1427 SSLRWIESPLRHAQPTCPGLELCTVYYAPLNFRDIMLASGKLSPDAIPGDLASQDCLLGMEFSGRD----------ASGR 1496 (2376)
T ss_pred             cceeeeecchhhcCCCCCCCceeEEEeccccHHHHHHhcCCCCcccCCCccchhhheeceeecccc----------CCCc
Confidence            57777776654   346777789999999999999888876433211    123478999999984          5699


Q ss_pred             EEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCccchhhhh-hhHHHHHHH-HHc
Q 017916          100 RVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHAC-RRA  177 (364)
Q Consensus       100 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~lP~~~~~~~aa~~~-~~~~a~~~l-~~~  177 (364)
                      ||+++.                            ..-++++-+.++.+++|.+|.++..++|++.+ .+.|+|++| .++
T Consensus      1497 RvM~mv----------------------------pAksLATt~l~~rd~lWevP~~WTleeAstVP~VYsTaYYALVvRG 1548 (2376)
T KOG1202|consen 1497 RVMGMV----------------------------PAKSLATTVLASRDFLWEVPSKWTLEEASTVPVVYSTAYYALVVRG 1548 (2376)
T ss_pred             EEEEee----------------------------ehhhhhhhhhcchhhhhhCCcccchhhcccCceEeeeehhhhhhhc
Confidence            999873                            23568889999999999999999999999998 889999998 679


Q ss_pred             CCCCCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcC----CCeEEecCCCcccHHHHHHHHHHHcC
Q 017916          178 NIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELG----ADNIVKVSTNLQDIAEEVEKIQKAMG  252 (364)
Q Consensus       178 ~~~~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg----~~~~~~~~~~~~~~~~~i~~~~~~~~  252 (364)
                      ..++|++||||++ |++|++||.+|.+.|+ .|+++..+.+|++++.++-    ..++-  ++.+.+|+..+.  ..+.|
T Consensus      1549 ~mkkGekiLIHaGsGGVGQAAIaiALa~G~-~VFTTVGSaEKRefL~~rFPqLqe~~~~--NSRdtsFEq~vl--~~T~G 1623 (2376)
T KOG1202|consen 1549 QMKKGEKILIHAGSGGVGQAAIAIALAHGC-TVFTTVGSAEKREFLLKRFPQLQETNFA--NSRDTSFEQHVL--WHTKG 1623 (2376)
T ss_pred             cccCCcEEEEecCCCchhHHHHHHHHHcCC-EEEEecCcHHHHHHHHHhchhhhhhccc--ccccccHHHHHH--HHhcC
Confidence            9999999999965 9999999999999999 6788889999999887543    22322  355567776664  45668


Q ss_pred             CCccEEEECCCCHHHHHHHHHhcccCCEEEEEcCCCCCccccc-hhhhhcCcEEEeeccC------CCcHHHHHHHHHcC
Q 017916          253 TGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPL-TPAAVREVDVVGVFRY------KNTWPLCLELLRSG  325 (364)
Q Consensus       253 ~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~------~~~~~~~~~~l~~g  325 (364)
                      +|+|+|++... .+-++..++||+-+|||..+|-.....+.++ .....++.+++|....      .+.+.++..++++|
T Consensus      1624 rGVdlVLNSLa-eEkLQASiRCLa~~GRFLEIGKfDLSqNspLGMavfLkNvsfHGiLLDsvmege~e~~~ev~~Lv~eG 1702 (2376)
T KOG1202|consen 1624 RGVDLVLNSLA-EEKLQASIRCLALHGRFLEIGKFDLSQNSPLGMAVFLKNVSFHGILLDSVMEGEEEMWREVAALVAEG 1702 (2376)
T ss_pred             CCeeeehhhhh-HHHHHHHHHHHHhcCeeeeecceecccCCcchhhhhhcccceeeeehhhhhcCcHHHHHHHHHHHHhh
Confidence            99999999988 8899999999999999999983322222233 3456788888887543      44567777777664


Q ss_pred             CCC--CCCceEEEeeCChhhHHHHHHHHhcCCCceEEEEeC
Q 017916          326 KID--VKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  364 (364)
Q Consensus       326 ~~~--~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  364 (364)
                      --.  .+|+...+|+-  .++++||+.|.+++..||+|+++
T Consensus      1703 IksGvV~PL~ttvF~~--~qvE~AFRfMasGKHIGKVvikv 1741 (2376)
T KOG1202|consen 1703 IKSGVVRPLPTTVFHG--QQVEDAFRFMASGKHIGKVVIKV 1741 (2376)
T ss_pred             hccCceeccccccccH--HHHHHHHHHHhccCccceEEEEE
Confidence            221  37888888877  99999999999999999999974

>PF08240 ADH_N: Alcohol dehydrogenase GroES-like domain; InterPro: IPR013154 This is the catalytic domain of alcohol dehydrogenases (1

Probab=99.89  E-value=4.8e-23  Score=157.91  Aligned_cols=109  Identities=39%  Similarity=0.702  Sum_probs=97.0

Q ss_pred             CCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCCccccCCCC
Q 017916           41 PYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRY  120 (364)
Q Consensus        41 ~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~  120 (364)
                      |+||+|||++++||++|++.+.|.  ......+|.++|||++|+|+++|+++++|++||+|+..+...|..|.+|..+..
T Consensus         1 P~eVlVkv~a~gic~~D~~~~~g~--~~~~~~~p~i~GhE~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~~~~   78 (109)
T PF08240_consen    1 PGEVLVKVRAAGICGSDLHIREGG--PPPPPKFPLILGHEGVGVVVAVGPGVTDFKVGDRVVVSPNIGCGECEYCLSGRP   78 (109)
T ss_dssp             TTEEEEEEEEEEE-HHHHHHHTTS--SSSTSSSSEES-SEEEEEEEEESTTTTSSGTT-EEEEESEEETSSSHHHHTTTG
T ss_pred             CCEEEEEEEEeeeCHHHHHHHhhc--cccCCCCCcccccceeeeeeeeccccccccccceeeeecccCccCchhhcCCcc
Confidence            799999999999999999999884  223468899999999999999999999999999999998888999999999999


Q ss_pred             CCCCCccccccCCCCCcceeEEEecCCceEEC
Q 017916          121 NLCPEMKFFATPPVHGSLANQVVHPADLCFKL  152 (364)
Q Consensus       121 ~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~l  152 (364)
                      ++|.+...++.. .+|+|+||+.+++++++++
T Consensus        79 ~~c~~~~~~g~~-~~G~~aey~~v~~~~~~~v  109 (109)
T PF08240_consen   79 NLCPNPEVLGLG-LDGGFAEYVVVPARNLVPV  109 (109)
T ss_dssp             GGTTTBEETTTS-STCSSBSEEEEEGGGEEEE
T ss_pred             ccCCCCCEeEcC-CCCcccCeEEEehHHEEEC
Confidence            999998888764 8999999999999999875

1.1.1 from EC). Many of them contain an inserted zinc binding domain. This domain has a GroES-like structure; a name derived from the superfamily of proteins with a GroES fold. Proteins with a GroES fold structure have a highly conserved hydrophobic core and a glycyl-aspartate dipeptide which is thought to maintain the fold [, ].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1YKF_D 2NVB_A 3FSR_D 1BXZ_B 3FTN_A 3MEQ_D 3UOG_B 3HZZ_B 4DVJ_A 1P0F_A ....

>PF00107 ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: IPR013149 Alcohol dehydrogenase (1

Probab=99.70  E-value=3.5e-16  Score=123.89  Aligned_cols=128  Identities=30%  Similarity=0.580  Sum_probs=112.7

Q ss_pred             HHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcCCCccEEEECCCCHHHHHHH
Q 017916          192 PIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTA  271 (364)
Q Consensus       192 ~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid~~g~~~~~~~~  271 (364)
                      ++|++++|+|+.+|+ .|++++.+++|.++++++|++++++++.  .++.+.++++..  +.++|++|||+|+++.++.+
T Consensus         1 ~vG~~a~q~ak~~G~-~vi~~~~~~~k~~~~~~~Ga~~~~~~~~--~~~~~~i~~~~~--~~~~d~vid~~g~~~~~~~~   75 (130)
T PF00107_consen    1 GVGLMAIQLAKAMGA-KVIATDRSEEKLELAKELGADHVIDYSD--DDFVEQIRELTG--GRGVDVVIDCVGSGDTLQEA   75 (130)
T ss_dssp             HHHHHHHHHHHHTTS-EEEEEESSHHHHHHHHHTTESEEEETTT--SSHHHHHHHHTT--TSSEEEEEESSSSHHHHHHH
T ss_pred             ChHHHHHHHHHHcCC-EEEEEECCHHHHHHHHhhcccccccccc--cccccccccccc--cccceEEEEecCcHHHHHHH
Confidence            589999999999996 8999999999999999999999988654  568888888753  35899999999999999999


Q ss_pred             HHhcccCCEEEEEcCCC-CCccccchhhhhcCcEEEeeccCC-CcHHHHHHHHHc
Q 017916          272 LSATRAGGKVCLVGMGH-HEMTVPLTPAAVREVDVVGVFRYK-NTWPLCLELLRS  324 (364)
Q Consensus       272 ~~~l~~~G~~v~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~  324 (364)
                      +++++++|+++.+|... ....++...++.+++++.++.... ++++++++++.+
T Consensus        76 ~~~l~~~G~~v~vg~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~la~  130 (130)
T PF00107_consen   76 IKLLRPGGRIVVVGVYGGDPISFNLMNLMFKEITIRGSWGGSPEDFQEALQLLAQ  130 (130)
T ss_dssp             HHHEEEEEEEEEESSTSTSEEEEEHHHHHHTTEEEEEESSGGHHHHHHHHHHHH-
T ss_pred             HHHhccCCEEEEEEccCCCCCCCCHHHHHhCCcEEEEEccCCHHHHHHHHHHhcC
Confidence            99999999999999876 566788888999999999999884 888999988864

1.1.1 from EC) (ADH) catalyzes the reversible oxidation of alcohols to their corresponding acetaldehyde or ketone with the concomitant reduction of NAD: alcohol + NAD = aldehyde or ketone + NADH Currently three structurally and catalytically different types of alcohol dehydrogenases are known: Zinc-containing 'long-chain' alcohol dehydrogenases. Insect-type, or 'short-chain' alcohol dehydrogenases. Iron-containing alcohol dehydrogenases. Zinc-containing ADH's [, ] are dimeric or tetrameric enzymes that bind two atoms of zinc per subunit. One of the zinc atom is essential for catalytic activity while the other is not. Both zinc atoms are coordinated by either cysteine or histidine residues; the catalytic zinc is coordinated by two cysteines and one histidine. Zinc-containing ADH's are found in bacteria, mammals, plants, and in fungi. In many species there is more than one isozyme (for example, humans have at least six isozymes, yeast have three, etc.). A number of other zinc-dependent dehydrogenases are closely related to zinc ADH [] and are included in this family. Sorbitol dehydrogenase (1.1.1.14 from EC) L-threonine 3-dehydrogenase (1.1.1.103 from EC) Glutathione-dependent formaldehyde dehydrogenase (1.1.1.284 from EC) Mannitol dehydrogenase (1.1.1.255 from EC) In addition, this family includes NADP-dependent quinone oxidoreductase (1.6.5.5 from EC), an enzyme found in bacteria (gene qor), in yeast and in mammals where, in some species such as rodents, it has been recruited as an eye lens protein and is known as zeta-crystallin []. The sequence of quinone oxidoreductase is distantly related to that other zinc-containing alcohol dehydrogenases and it lacks the zinc-ligand residues. The torpedo fish and mammalian synaptic vesicle membrane protein vat-1 is related to qor. This entry represents the cofactor-binding domain of these enzymes, which is normally found towards the C terminus. Structural studies indicate that it forms a classical Rossman fold that reversibly binds NAD(H) [, , ].; GO: 0008270 zinc ion binding, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3PI7_A 3COS_D 1VJ1_A 2ZB3_A 1PIW_B 1Q1N_A 1PS0_A 2EER_B 3KRT_A 1ZSY_A ....

>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy)

Probab=99.40  E-value=2.2e-11  Score=113.11  Aligned_cols=172  Identities=19%  Similarity=0.276  Sum_probs=134.3

Q ss_pred             HHHHH-HHcC-CCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHH
Q 017916          170 GLHAC-RRAN-IGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKI  247 (364)
Q Consensus       170 a~~~l-~~~~-~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~  247 (364)
                      .+.++ +..+ ..+|++|+|.|+|.+|+.+++.++.+|+ .|++++.++.|.+.++.+|+..+ +       ..+    .
T Consensus       188 ~~~~i~r~t~~~l~GktVvViG~G~IG~~va~~ak~~Ga-~ViV~d~d~~R~~~A~~~G~~~~-~-------~~e----~  254 (413)
T cd00401         188 LIDGIKRATDVMIAGKVAVVAGYGDVGKGCAQSLRGQGA-RVIVTEVDPICALQAAMEGYEVM-T-------MEE----A  254 (413)
T ss_pred             hHHHHHHhcCCCCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEECChhhHHHHHhcCCEEc-c-------HHH----H
Confidence            44555 3333 4689999999999999999999999999 67889999999999999998432 1       111    1


Q ss_pred             HHHcCCCccEEEECCCCHHHHHHH-HHhcccCCEEEEEcCCCCCccccchhhhhcCcEEEeeccCCC--cHH--HHHHHH
Q 017916          248 QKAMGTGIDVSFDCAGFNKTMSTA-LSATRAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKN--TWP--LCLELL  322 (364)
Q Consensus       248 ~~~~~~~~d~vid~~g~~~~~~~~-~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~--~~~~~l  322 (364)
                      .    .++|++|+|+|+...+... ++.++++|+++.+|..  +..++...+..+.+++.+...+..  .++  +.+.++
T Consensus       255 v----~~aDVVI~atG~~~~i~~~~l~~mk~GgilvnvG~~--~~eId~~~L~~~el~i~g~~~~~~~~~~~~g~aI~LL  328 (413)
T cd00401         255 V----KEGDIFVTTTGNKDIITGEHFEQMKDGAIVCNIGHF--DVEIDVKGLKENAVEVVNIKPQVDRYELPDGRRIILL  328 (413)
T ss_pred             H----cCCCEEEECCCCHHHHHHHHHhcCCCCcEEEEeCCC--CCccCHHHHHhhccEEEEccCCcceEEcCCcchhhhh
Confidence            1    3589999999988888865 9999999999999854  446777778889999999887732  455  799999


Q ss_pred             HcCCC-CCCCceEEE-----eeCChh-hHHHHHHHHhcCCC-ceEEEE
Q 017916          323 RSGKI-DVKPLVTHR-----FGFSQK-EVEEAFETSARGGT-AIKVMF  362 (364)
Q Consensus       323 ~~g~~-~~~~~~~~~-----~~~~~~-~~~~a~~~~~~~~~-~gkvvv  362 (364)
                      .+|.+ ++.+.+++.     |+|  + ++.++++.+.++.. .-|+++
T Consensus       329 a~Grlvnl~~~~gH~~~vmd~sf--~~q~l~a~~l~~~~~~~~~kV~~  374 (413)
T cd00401         329 AEGRLVNLGCATGHPSFVMSNSF--TNQVLAQIELWTNRDKYEVGVYF  374 (413)
T ss_pred             hCcCCCCCcccCCCccceechhH--HHHHHHHHHHHhcCCcCCCcEEE
Confidence            99999 777666666     777  7 99999999887643 245654

The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.

>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional

Probab=99.39  E-value=1.1e-11  Score=118.03  Aligned_cols=155  Identities=17%  Similarity=0.266  Sum_probs=114.9

Q ss_pred             CCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeE-EecCCC-----------cccHHHHHHH
Q 017916          179 IGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNI-VKVSTN-----------LQDIAEEVEK  246 (364)
Q Consensus       179 ~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~-~~~~~~-----------~~~~~~~i~~  246 (364)
                      ..++++|+|.|+|.+|+++++.|+.+|+ .|++++.++++.+.++++|++.+ ++..+.           ++++.+..++
T Consensus       162 ~~pg~kVlViGaG~iGL~Ai~~Ak~lGA-~V~a~D~~~~rle~aeslGA~~v~i~~~e~~~~~~gya~~~s~~~~~~~~~  240 (509)
T PRK09424        162 KVPPAKVLVIGAGVAGLAAIGAAGSLGA-IVRAFDTRPEVAEQVESMGAEFLELDFEEEGGSGDGYAKVMSEEFIKAEMA  240 (509)
T ss_pred             CcCCCEEEEECCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCeEEEeccccccccccchhhhcchhHHHHHHH
Confidence            4689999999999999999999999999 79999999999999999999854 432211           1122222222


Q ss_pred             HHHHcCCCccEEEECCCCH-----HH-HHHHHHhcccCCEEEEEcCC-CCC--ccccchhhhh-cCcEEEeeccCCCcHH
Q 017916          247 IQKAMGTGIDVSFDCAGFN-----KT-MSTALSATRAGGKVCLVGMG-HHE--MTVPLTPAAV-REVDVVGVFRYKNTWP  316 (364)
Q Consensus       247 ~~~~~~~~~d~vid~~g~~-----~~-~~~~~~~l~~~G~~v~~g~~-~~~--~~~~~~~~~~-~~~~~~~~~~~~~~~~  316 (364)
                      ......+++|++|+|+|.+     .. .+++++.++++|++++++.. .+.  ...+...++. +++++.|.+..+..+.
T Consensus       241 ~~~~~~~gaDVVIetag~pg~~aP~lit~~~v~~mkpGgvIVdvg~~~GG~~e~t~~~~~v~~~~gVti~Gv~n~P~~~p  320 (509)
T PRK09424        241 LFAEQAKEVDIIITTALIPGKPAPKLITAEMVASMKPGSVIVDLAAENGGNCELTVPGEVVVTDNGVTIIGYTDLPSRLP  320 (509)
T ss_pred             HHHhccCCCCEEEECCCCCcccCcchHHHHHHHhcCCCCEEEEEccCCCCCcccccCccceEeECCEEEEEeCCCchhHH
Confidence            2221125799999999963     35 48999999999999999864 332  3344445565 8999999887765555


Q ss_pred             -HHHHHHHcCCCCCCCceE
Q 017916          317 -LCLELLRSGKIDVKPLVT  334 (364)
Q Consensus       317 -~~~~~l~~g~~~~~~~~~  334 (364)
                       ++.+++.++.+++.+.++
T Consensus       321 ~~As~lla~~~i~l~~lIt  339 (509)
T PRK09424        321 TQSSQLYGTNLVNLLKLLC  339 (509)
T ss_pred             HHHHHHHHhCCccHHHHhc
Confidence             599999999886555544

>PF13602 ADH_zinc_N_2: Zinc-binding dehydrogenase; PDB: 3TQH_A 2VN8_A 3GOH_A 4A27_A

Probab=99.34  E-value=7.4e-13  Score=104.32  Aligned_cols=117  Identities=27%  Similarity=0.391  Sum_probs=79.5

Q ss_pred             cCCCeEEecCCCcccHHHHHHHHHHHcCCCccEEEECCC--CHHHHHHHHHhcccCCEEEEEcCCCCCccccchh--hhh
Q 017916          225 LGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAG--FNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTP--AAV  300 (364)
Q Consensus       225 lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid~~g--~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~--~~~  300 (364)
                      ||++++++|..  +++         ..++++|+|||++|  ....+..++++| ++|+++.++.     ......  ...
T Consensus         1 LGAd~vidy~~--~~~---------~~~~~~D~ViD~~g~~~~~~~~~~~~~l-~~G~~v~i~~-----~~~~~~~~~~~   63 (127)
T PF13602_consen    1 LGADEVIDYRD--TDF---------AGPGGVDVVIDTVGQTGESLLDASRKLL-PGGRVVSIGG-----DLPSFARRLKG   63 (127)
T ss_dssp             CT-SEEEETTC--SHH---------HTTS-EEEEEESS-CCHHHCGGGCCCTE-EEEEEEEE-S-----HHHHHHHHHHC
T ss_pred             CCcCEEecCCC--ccc---------cCCCCceEEEECCCCccHHHHHHHHHHC-CCCEEEEECC-----cccchhhhhcc
Confidence            68999999863  344         23679999999999  655557777888 9999999873     111111  112


Q ss_pred             cCcEEEeecc------CCCcHHHHHHHHHcCCCCCCCceEEEeeCChhhHHHHHHHHhcCCCceEEEE
Q 017916          301 REVDVVGVFR------YKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMF  362 (364)
Q Consensus       301 ~~~~~~~~~~------~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv  362 (364)
                      ..++......      ..+.++++.+++++|++  +|.+.++|+|  +++.+|++.++++...||+|+
T Consensus        64 ~~~~~~~~~~~~~~~~~~~~l~~l~~l~~~G~l--~~~i~~~f~l--~~~~~A~~~l~~~~~~GKvVl  127 (127)
T PF13602_consen   64 RSIRYSFLFSVDPNAIRAEALEELAELVAEGKL--KPPIDRVFPL--EEAPEAHERLESGHARGKVVL  127 (127)
T ss_dssp             HHCEEECCC-H--HHHHHHHHHHHHHHHHTTSS-----EEEEEEG--GGHHHHHHHHHCT--SSEEEE
T ss_pred             cceEEEEEEecCCCchHHHHHHHHHHHHHCCCe--EEeeccEECH--HHHHHHHHHHHhCCCCCeEeC
Confidence            2333333331      23459999999999999  8889999999  999999999999999999996

>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit

Probab=98.55  E-value=1e-06  Score=84.09  Aligned_cols=130  Identities=18%  Similarity=0.238  Sum_probs=90.3

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCC-------------cccHHHHHHH
Q 017916          180 GPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTN-------------LQDIAEEVEK  246 (364)
Q Consensus       180 ~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~-------------~~~~~~~i~~  246 (364)
                      .++++|+|.|+|.+|++++++|+.+|+ .|++++.+.++.+.++++|++.+. ++..             ++++.+...+
T Consensus       162 vp~akVlViGaG~iGl~Aa~~ak~lGA-~V~v~d~~~~rle~a~~lGa~~v~-v~~~e~g~~~~gYa~~~s~~~~~~~~~  239 (511)
T TIGR00561       162 VPPAKVLVIGAGVAGLAAIGAANSLGA-IVRAFDTRPEVKEQVQSMGAEFLE-LDFKEEGGSGDGYAKVMSEEFIAAEME  239 (511)
T ss_pred             CCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCeEEe-ccccccccccccceeecCHHHHHHHHH
Confidence            467999999999999999999999999 588889999999999999987532 2211             1233333333


Q ss_pred             HHHHcCCCccEEEECC---CCHH---HHHHHHHhcccCCEEEEEcCC-CCCcccc--chhhh-hcCcEEEeeccC
Q 017916          247 IQKAMGTGIDVSFDCA---GFNK---TMSTALSATRAGGKVCLVGMG-HHEMTVP--LTPAA-VREVDVVGVFRY  311 (364)
Q Consensus       247 ~~~~~~~~~d~vid~~---g~~~---~~~~~~~~l~~~G~~v~~g~~-~~~~~~~--~~~~~-~~~~~~~~~~~~  311 (364)
                      .......++|++|+|+   |.+.   ...++++.+++|+.+++++.. ++.....  ...+. ..++++.+....
T Consensus       240 ~~~e~~~~~DIVI~TalipG~~aP~Lit~emv~~MKpGsvIVDlA~d~GGn~E~t~p~~~~~~~~GV~~~gv~nl  314 (511)
T TIGR00561       240 LFAAQAKEVDIIITTALIPGKPAPKLITEEMVDSMKAGSVIVDLAAEQGGNCEYTKPGEVYTTENQVKVIGYTDL  314 (511)
T ss_pred             HHHHHhCCCCEEEECcccCCCCCCeeehHHHHhhCCCCCEEEEeeeCCCCCEEEecCceEEEecCCEEEEeeCCc
Confidence            3333346799999999   6433   566789999999999999743 2222221  11122 234777776654

In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff.

>PF11017 DUF2855: Protein of unknown function (DUF2855); InterPro: IPR021276 This family of proteins has no known function

Probab=98.54  E-value=5.9e-06  Score=73.67  Aligned_cols=255  Identities=13%  Similarity=0.109  Sum_probs=146.4

Q ss_pred             cccccceeEEEEEeCCCCCCCCCCCEEEEcCC----cCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceE
Q 017916           75 MVIGHECAGVIEKVGSEVKTLVPGDRVALEPG----ISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCF  150 (364)
Q Consensus        75 ~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~  150 (364)
                      .+|-..+ ++|++  +.+.++.+|.||+++..    ...+..+.-..+.....+|+.     .....|.+|.++..+..+
T Consensus        32 ~vPvWGf-A~Vve--S~~~~i~vGerlyGy~P~ashl~l~p~~v~~~~f~d~s~hR~-----~l~~~YN~Y~r~~~d~~y  103 (314)
T PF11017_consen   32 IVPVWGF-ATVVE--SRHPGIAVGERLYGYFPMASHLVLEPGKVSPGGFRDVSPHRA-----GLPPIYNQYLRVSADPAY  103 (314)
T ss_pred             ccccceE-EEEEe--eCCCCccCccEEEeeccccceeEEeccccCCCccccChhhhC-----cCchhhhceeecCCCccc
Confidence            3455555 56655  78889999999999742    112222222222333333332     233567788877766554


Q ss_pred             ECCCCCCccchhhhhhhHHHHHHHHH---cCCCCCCEEEEEcC-CHHHHHHHHHHH-HCCCCEEEEEecChhHHHHHHHc
Q 017916          151 KLPDNVSLEEGAMCEPLSVGLHACRR---ANIGPETNVLIMGA-GPIGLVTMLGAR-AFGAPRIVIVDVDDYRLSVAKEL  225 (364)
Q Consensus       151 ~lP~~~~~~~aa~~~~~~~a~~~l~~---~~~~~g~~VLI~Ga-g~~G~~ai~la~-~~g~~~vv~~~~~~~~~~~~~~l  225 (364)
                      .-  ......+.+-+.+.|+|..-+.   .+.-..+.|+|.+| +-+++..+..++ ..+.-.+++++ |..+.++.+.+
T Consensus       104 ~~--~~e~~~~LlrPLf~Tsfll~d~l~~~~~~ga~~vvl~SASSKTA~glA~~L~~~~~~~~~vglT-S~~N~~Fve~l  180 (314)
T PF11017_consen  104 DP--EREDWQMLLRPLFITSFLLDDFLFDNDFFGAAQVVLSSASSKTAIGLAYCLKKQRGPPKVVGLT-SARNVAFVESL  180 (314)
T ss_pred             Cc--chhHHHHHHHHHHHHHHHHHHHhcccccCCccEEEEeccchHHHHHHHHHhhccCCCceEEEEe-cCcchhhhhcc
Confidence            21  1121223333577788865432   22334467788887 788888888887 55555788885 66667799999


Q ss_pred             CC-CeEEecCCCcccHHHHHHHHHHHcCCCccEEEECCCCHHHHHHHHHhcccCC-EEEEEcCCCCCcc-----------
Q 017916          226 GA-DNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGG-KVCLVGMGHHEMT-----------  292 (364)
Q Consensus       226 g~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G-~~v~~g~~~~~~~-----------  292 (364)
                      |+ +.++.|++        +..+.   ...--+++|..|+.+....+..++...= +.+.+|.+..+..           
T Consensus       181 g~Yd~V~~Yd~--------i~~l~---~~~~~v~VDfaG~~~~~~~Lh~~l~d~l~~~~~VG~th~~~~~~~~~l~g~~~  249 (314)
T PF11017_consen  181 GCYDEVLTYDD--------IDSLD---APQPVVIVDFAGNGEVLAALHEHLGDNLVYSCLVGATHWDKVEAPADLPGPRP  249 (314)
T ss_pred             CCceEEeehhh--------hhhcc---CCCCEEEEECCCCHHHHHHHHHHHhhhhhEEEEEEccCccccCccccCCCCCc
Confidence            97 56777754        33331   2456788999999988888888887653 4556664332211           


Q ss_pred             --ccchhhhhcCcEEEeeccCCCcHHHH-HHHHHcCCCCCCCceEEEeeCChhhHHHHHHHHhcCC
Q 017916          293 --VPLTPAAVREVDVVGVFRYKNTWPLC-LELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGG  355 (364)
Q Consensus       293 --~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~  355 (364)
                        ++....+.+.+.-.|...+.+.+.+. .++++.. . ....+...-+.  +.+.++++.+.+++
T Consensus       250 ~~FFAp~~~~kr~~~~G~~~~~~r~~~aw~~f~~~~-~-~wl~~~~~~G~--ea~~~~y~~l~~G~  311 (314)
T PF11017_consen  250 EFFFAPDQIDKRIKEWGAAEFFQRMAAAWKRFAADA-Q-PWLKVEEVAGP--EAVEAAYQDLLAGK  311 (314)
T ss_pred             EEEeChHHHHHHHHHhCHHHHHHHHHHHHHHHHHhh-c-CcEEEEEecCH--HHHHHHHHHHhcCC
Confidence              11112222333333332222222222 2333322 1 13345566677  99999999998774

>PRK11873 arsM arsenite S-adenosylmethyltransferase; Reviewed

Probab=98.49  E-value=1.7e-06  Score=77.48  Aligned_cols=173  Identities=17%  Similarity=0.236  Sum_probs=106.1

Q ss_pred             HcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCC-EEEEEecChhHHHHHHHc----CCCeEEecCCCcccHHHHHHHHHHH
Q 017916          176 RANIGPETNVLIMGAGPIGLVTMLGARAFGAP-RIVIVDVDDYRLSVAKEL----GADNIVKVSTNLQDIAEEVEKIQKA  250 (364)
Q Consensus       176 ~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~-~vv~~~~~~~~~~~~~~l----g~~~~~~~~~~~~~~~~~i~~~~~~  250 (364)
                      .+.+++|++||..|+|. |..+.++++..|.. .|++++.+++..+.+++.    +...+....   .+    +..+. .
T Consensus        72 ~~~~~~g~~VLDiG~G~-G~~~~~~a~~~g~~~~v~gvD~s~~~l~~A~~~~~~~g~~~v~~~~---~d----~~~l~-~  142 (272)
T PRK11873         72 LAELKPGETVLDLGSGG-GFDCFLAARRVGPTGKVIGVDMTPEMLAKARANARKAGYTNVEFRL---GE----IEALP-V  142 (272)
T ss_pred             hccCCCCCEEEEeCCCC-CHHHHHHHHHhCCCCEEEEECCCHHHHHHHHHHHHHcCCCCEEEEE---cc----hhhCC-C
Confidence            46788999999999877 88888888887764 699999999988887763    433221111   12    11111 1


Q ss_pred             cCCCccEEEECC------CCHHHHHHHHHhcccCCEEEEEcCCCCCccccchhhhhcCcEEEee-ccCCCcHHHHHHHHH
Q 017916          251 MGTGIDVSFDCA------GFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGV-FRYKNTWPLCLELLR  323 (364)
Q Consensus       251 ~~~~~d~vid~~------g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~  323 (364)
                      ..+.+|+|+...      .....+.++++.|+|+|+++..+.....   .......+...+.+. ........++.++++
T Consensus       143 ~~~~fD~Vi~~~v~~~~~d~~~~l~~~~r~LkpGG~l~i~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~  219 (272)
T PRK11873        143 ADNSVDVIISNCVINLSPDKERVFKEAFRVLKPGGRFAISDVVLRG---ELPEEIRNDAELYAGCVAGALQEEEYLAMLA  219 (272)
T ss_pred             CCCceeEEEEcCcccCCCCHHHHHHHHHHHcCCCcEEEEEEeeccC---CCCHHHHHhHHHHhccccCCCCHHHHHHHHH
Confidence            134799998543      2356889999999999999987643221   111222222222211 112345667778887


Q ss_pred             cCCCC-CCCceEEEeeCChhhHHHHHHHH--hcCCCceEEEE
Q 017916          324 SGKID-VKPLVTHRFGFSQKEVEEAFETS--ARGGTAIKVMF  362 (364)
Q Consensus       324 ~g~~~-~~~~~~~~~~~~~~~~~~a~~~~--~~~~~~gkvvv  362 (364)
                      +..+. ........+.+  +++.++++.+  ..+...++.+.
T Consensus       220 ~aGf~~v~i~~~~~~~l--~~~~~~~~~~~~~~~~~~~~~~~  259 (272)
T PRK11873        220 EAGFVDITIQPKREYRI--PDAREFLEDWGIAPGRQLDGYIV  259 (272)
T ss_pred             HCCCCceEEEeccceec--ccHHHHHHHhccccccccCceEE
Confidence            74442 22223345667  8888999888  55544455443

>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional

Probab=98.24  E-value=2.5e-05  Score=73.29  Aligned_cols=103  Identities=21%  Similarity=0.287  Sum_probs=78.5

Q ss_pred             HHHHHHHHc-CCC-CCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHH
Q 017916          169 VGLHACRRA-NIG-PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEK  246 (364)
Q Consensus       169 ~a~~~l~~~-~~~-~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~  246 (364)
                      .+|.++.++ ++. .|++|+|.|.|.+|..+++.++.+|+ .|++++.++.+...+...|+. +.+           +.+
T Consensus       197 s~~~ai~rat~~~l~Gk~VlViG~G~IG~~vA~~lr~~Ga-~ViV~d~dp~ra~~A~~~G~~-v~~-----------l~e  263 (425)
T PRK05476        197 SLLDGIKRATNVLIAGKVVVVAGYGDVGKGCAQRLRGLGA-RVIVTEVDPICALQAAMDGFR-VMT-----------MEE  263 (425)
T ss_pred             hhHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEcCCchhhHHHHhcCCE-ecC-----------HHH
Confidence            356666544 544 89999999999999999999999999 688888888776666666654 211           112


Q ss_pred             HHHHcCCCccEEEECCCCHHHHH-HHHHhcccCCEEEEEcCCC
Q 017916          247 IQKAMGTGIDVSFDCAGFNKTMS-TALSATRAGGKVCLVGMGH  288 (364)
Q Consensus       247 ~~~~~~~~~d~vid~~g~~~~~~-~~~~~l~~~G~~v~~g~~~  288 (364)
                      ..    .++|++|+++|....+. ..+..+++++.++..|...
T Consensus       264 al----~~aDVVI~aTG~~~vI~~~~~~~mK~GailiNvG~~d  302 (425)
T PRK05476        264 AA----ELGDIFVTATGNKDVITAEHMEAMKDGAILANIGHFD  302 (425)
T ss_pred             HH----hCCCEEEECCCCHHHHHHHHHhcCCCCCEEEEcCCCC
Confidence            21    36899999999877776 6889999999999988544

>PRK08306 dipicolinate synthase subunit A; Reviewed

Probab=98.22  E-value=8.6e-05  Score=67.00  Aligned_cols=114  Identities=17%  Similarity=0.183  Sum_probs=83.3

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcCCCccEEEE
Q 017916          181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  260 (364)
Q Consensus       181 ~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid  260 (364)
                      .+.+|+|.|.|.+|+++++.++.+|+ .|.+++++.++.+.++.+|+..+ .+    .+    +.+.    -.++|+||+
T Consensus       151 ~g~kvlViG~G~iG~~~a~~L~~~Ga-~V~v~~r~~~~~~~~~~~G~~~~-~~----~~----l~~~----l~~aDiVI~  216 (296)
T PRK08306        151 HGSNVLVLGFGRTGMTLARTLKALGA-NVTVGARKSAHLARITEMGLSPF-HL----SE----LAEE----VGKIDIIFN  216 (296)
T ss_pred             CCCEEEEECCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHcCCeee-cH----HH----HHHH----hCCCCEEEE
Confidence            58999999999999999999999999 78888888888888888886532 11    11    2222    146999999


Q ss_pred             CCCCHHHHHHHHHhcccCCEEEEEcCCCCCccccchhhhhcCcEEEeecc
Q 017916          261 CAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFR  310 (364)
Q Consensus       261 ~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~  310 (364)
                      |+...-.....++.+++++.+++++...+...+  .....++++..+...
T Consensus       217 t~p~~~i~~~~l~~~~~g~vIIDla~~pggtd~--~~a~~~Gv~~~~~~~  264 (296)
T PRK08306        217 TIPALVLTKEVLSKMPPEALIIDLASKPGGTDF--EYAEKRGIKALLAPG  264 (296)
T ss_pred             CCChhhhhHHHHHcCCCCcEEEEEccCCCCcCe--eehhhCCeEEEEECC
Confidence            987543445778899999999999865544433  334456667665443

>PRK00517 prmA ribosomal protein L11 methyltransferase; Reviewed

Probab=98.21  E-value=6.1e-05  Score=66.41  Aligned_cols=132  Identities=22%  Similarity=0.324  Sum_probs=84.6

Q ss_pred             CcceeEEEecCCceEECCCCCCccchhhhhhhHHHHHHHHHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecC
Q 017916          136 GSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVD  215 (364)
Q Consensus       136 g~~~~~v~~~~~~~~~lP~~~~~~~aa~~~~~~~a~~~l~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~  215 (364)
                      .+|.+|.. +....+.+++++++..+.-..+. .....+.. .+.++++||-.|+|. |..++.+++ .|+..+++++.+
T Consensus        77 p~~~~~~~-~~~~~i~i~p~~afgtg~h~tt~-~~l~~l~~-~~~~~~~VLDiGcGs-G~l~i~~~~-~g~~~v~giDis  151 (250)
T PRK00517         77 PSWEDPPD-PDEINIELDPGMAFGTGTHPTTR-LCLEALEK-LVLPGKTVLDVGCGS-GILAIAAAK-LGAKKVLAVDID  151 (250)
T ss_pred             CCCcCCCC-CCeEEEEECCCCccCCCCCHHHH-HHHHHHHh-hcCCCCEEEEeCCcH-HHHHHHHHH-cCCCeEEEEECC
Confidence            45566644 66788899998888776522211 12223322 256889999999876 877776544 677679999999


Q ss_pred             hhHHHHHHHc----CCCeEEecCCCcccHHHHHHHHHHHcCCCccEEEECCCCH---HHHHHHHHhcccCCEEEEEcCC
Q 017916          216 DYRLSVAKEL----GADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFN---KTMSTALSATRAGGKVCLVGMG  287 (364)
Q Consensus       216 ~~~~~~~~~l----g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid~~g~~---~~~~~~~~~l~~~G~~v~~g~~  287 (364)
                      +...+.+++.    +....+....               ....+|+|+......   ..+..+.+.|+++|+++..+..
T Consensus       152 ~~~l~~A~~n~~~~~~~~~~~~~~---------------~~~~fD~Vvani~~~~~~~l~~~~~~~LkpgG~lilsgi~  215 (250)
T PRK00517        152 PQAVEAARENAELNGVELNVYLPQ---------------GDLKADVIVANILANPLLELAPDLARLLKPGGRLILSGIL  215 (250)
T ss_pred             HHHHHHHHHHHHHcCCCceEEEcc---------------CCCCcCEEEEcCcHHHHHHHHHHHHHhcCCCcEEEEEECc
Confidence            9887776642    2211111000               011589998765532   3456788899999999987643

>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase

Probab=98.12  E-value=9.6e-06  Score=73.85  Aligned_cols=108  Identities=25%  Similarity=0.312  Sum_probs=81.0

Q ss_pred             CceEECCCCCCccchhhhhhhHHHHHHHHHcCC----CCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHH-HH
Q 017916          147 DLCFKLPDNVSLEEGAMCEPLSVGLHACRRANI----GPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRL-SV  221 (364)
Q Consensus       147 ~~~~~lP~~~~~~~aa~~~~~~~a~~~l~~~~~----~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~-~~  221 (364)
                      ...+++|+.+..+.+....+.++++++++.+..    -++.+|+|.|+|.+|..+++.++..|+..|++++++.++. ++
T Consensus       139 ~~a~~~~k~vr~et~i~~~~~sv~~~Av~~a~~~~~~l~~~~V~ViGaG~iG~~~a~~L~~~g~~~V~v~~r~~~ra~~l  218 (311)
T cd05213         139 QKAIKVGKRVRTETGISRGAVSISSAAVELAEKIFGNLKGKKVLVIGAGEMGELAAKHLAAKGVAEITIANRTYERAEEL  218 (311)
T ss_pred             HHHHHHHHHHhhhcCCCCCCcCHHHHHHHHHHHHhCCccCCEEEEECcHHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHH
Confidence            456778899998888877778888888754332    4789999999999999999999988887888888887764 67


Q ss_pred             HHHcCCCeEEecCCCcccHHHHHHHHHHHcCCCccEEEECCCCHHH
Q 017916          222 AKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKT  267 (364)
Q Consensus       222 ~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid~~g~~~~  267 (364)
                      ++++|.. +.++    .+    +.+..    ...|+||.|++++..
T Consensus       219 a~~~g~~-~~~~----~~----~~~~l----~~aDvVi~at~~~~~  251 (311)
T cd05213         219 AKELGGN-AVPL----DE----LLELL----NEADVVISATGAPHY  251 (311)
T ss_pred             HHHcCCe-EEeH----HH----HHHHH----hcCCEEEECCCCCch
Confidence            7888873 3221    11    22221    358999999997655

Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,

>TIGR00936 ahcY adenosylhomocysteinase

Probab=98.02  E-value=0.00013  Score=68.05  Aligned_cols=102  Identities=22%  Similarity=0.291  Sum_probs=76.8

Q ss_pred             HHHHHHH-cC-CCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHH
Q 017916          170 GLHACRR-AN-IGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKI  247 (364)
Q Consensus       170 a~~~l~~-~~-~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~  247 (364)
                      ++.++.+ .+ ...|++|+|.|.|.+|+.+++.++.+|+ .|++++.++.+...+...|+. +.+       ..+    .
T Consensus       181 ~~~~i~r~t~~~l~Gk~VvViG~G~IG~~vA~~ak~~Ga-~ViV~d~dp~r~~~A~~~G~~-v~~-------lee----a  247 (406)
T TIGR00936       181 TIDGILRATNLLIAGKTVVVAGYGWCGKGIAMRARGMGA-RVIVTEVDPIRALEAAMDGFR-VMT-------MEE----A  247 (406)
T ss_pred             HHHHHHHhcCCCCCcCEEEEECCCHHHHHHHHHHhhCcC-EEEEEeCChhhHHHHHhcCCE-eCC-------HHH----H
Confidence            4444433 33 4689999999999999999999999999 588888888777666666763 211       111    1


Q ss_pred             HHHcCCCccEEEECCCCHHHHHH-HHHhcccCCEEEEEcCCC
Q 017916          248 QKAMGTGIDVSFDCAGFNKTMST-ALSATRAGGKVCLVGMGH  288 (364)
Q Consensus       248 ~~~~~~~~d~vid~~g~~~~~~~-~~~~l~~~G~~v~~g~~~  288 (364)
                      .    .+.|++|++.|....+.. .+..+++++.++..|...
T Consensus       248 l----~~aDVVItaTG~~~vI~~~~~~~mK~GailiN~G~~~  285 (406)
T TIGR00936       248 A----KIGDIFITATGNKDVIRGEHFENMKDGAIVANIGHFD  285 (406)
T ss_pred             H----hcCCEEEECCCCHHHHHHHHHhcCCCCcEEEEECCCC
Confidence            1    357999999998887774 889999999999988543

This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704).

>COG2518 Pcm Protein-L-isoaspartate carboxylmethyltransferase [Posttranslational modification, protein turnover, chaperones]

Probab=97.97  E-value=0.0001  Score=61.76  Aligned_cols=112  Identities=18%  Similarity=0.229  Sum_probs=80.3

Q ss_pred             hhhhhhhHHHHHHHHHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChh----HHHHHHHcCCCeEEec-CC
Q 017916          161 GAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDY----RLSVAKELGADNIVKV-ST  235 (364)
Q Consensus       161 aa~~~~~~~a~~~l~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~----~~~~~~~lg~~~~~~~-~~  235 (364)
                      .-+++.......+++...+++|++||-.|+|. |..++-+|+..+  .|+.++..++    ....++.+|..++... .+
T Consensus        52 gqtis~P~~vA~m~~~L~~~~g~~VLEIGtGs-GY~aAvla~l~~--~V~siEr~~~L~~~A~~~L~~lg~~nV~v~~gD  128 (209)
T COG2518          52 GQTISAPHMVARMLQLLELKPGDRVLEIGTGS-GYQAAVLARLVG--RVVSIERIEELAEQARRNLETLGYENVTVRHGD  128 (209)
T ss_pred             CceecCcHHHHHHHHHhCCCCCCeEEEECCCc-hHHHHHHHHHhC--eEEEEEEcHHHHHHHHHHHHHcCCCceEEEECC
Confidence            33444333344466889999999999999876 999999999988  6899988776    3344667887654332 22


Q ss_pred             CcccHHHHHHHHHHHcCCCccEEEECCCCHHHHHHHHHhcccCCEEEEE
Q 017916          236 NLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLV  284 (364)
Q Consensus       236 ~~~~~~~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~  284 (364)
                      ...-|.         ...+||.|+-+.+.++.-..+++.|+++|+++.-
T Consensus       129 G~~G~~---------~~aPyD~I~Vtaaa~~vP~~Ll~QL~~gGrlv~P  168 (209)
T COG2518         129 GSKGWP---------EEAPYDRIIVTAAAPEVPEALLDQLKPGGRLVIP  168 (209)
T ss_pred             cccCCC---------CCCCcCEEEEeeccCCCCHHHHHhcccCCEEEEE
Confidence            222211         1368999998877677778899999999999875

>TIGR01035 hemA glutamyl-tRNA reductase

Probab=97.87  E-value=7.8e-07  Score=84.20  Aligned_cols=159  Identities=20%  Similarity=0.244  Sum_probs=101.3

Q ss_pred             cccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEE---
Q 017916           75 MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFK---  151 (364)
Q Consensus        75 ~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~---  151 (364)
                      ..-|.|+++.+.+|+++.++.     |++.+.. |+.|++|+.    .|.+.+..+ ...++.|++++.++. .+..   
T Consensus        88 ~~~~~~a~~hl~~Va~GldS~-----V~GE~qI-~gQvk~a~~----~a~~~~~~g-~~l~~lf~~a~~~~k-~vr~~t~  155 (417)
T TIGR01035        88 ILTGESAVEHLFRVASGLDSM-----VVGETQI-LGQVKNAYK----VAQEEKTVG-KVLERLFQKAFSVGK-RVRTETD  155 (417)
T ss_pred             hcCchHHHHHHHHHHhhhhhh-----hcCChHH-HHHHHHHHH----HHHHcCCch-HHHHHHHHHHHHHhh-hhhhhcC
Confidence            357889999999999998774     4444444 677887742    333333332 235678999887765 2222   


Q ss_pred             C-CCCCCccchhhhhhhHHHHH-HHHHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHH-HHHHcCCC
Q 017916          152 L-PDNVSLEEGAMCEPLSVGLH-ACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLS-VAKELGAD  228 (364)
Q Consensus       152 l-P~~~~~~~aa~~~~~~~a~~-~l~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~-~~~~lg~~  228 (364)
                      + +..++...+        |.. +.+.....++++|+|.|+|.+|..+++.++..|+..+++++++.++.. +++.+|..
T Consensus       156 i~~~~vSv~~~--------Av~la~~~~~~l~~~~VlViGaG~iG~~~a~~L~~~G~~~V~v~~rs~~ra~~la~~~g~~  227 (417)
T TIGR01035       156 ISAGAVSISSA--------AVELAERIFGSLKGKKALLIGAGEMGELVAKHLLRKGVGKILIANRTYERAEDLAKELGGE  227 (417)
T ss_pred             CCCCCcCHHHH--------HHHHHHHHhCCccCCEEEEECChHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCe
Confidence            2 112221111        111 123344467899999999999999999999999778888888877754 66777754


Q ss_pred             eEEecCCCcccHHHHHHHHHHHcCCCccEEEECCCCHH
Q 017916          229 NIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNK  266 (364)
Q Consensus       229 ~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid~~g~~~  266 (364)
                       .+.+    .+    +.+..    .++|+||+|++++.
T Consensus       228 -~i~~----~~----l~~~l----~~aDvVi~aT~s~~  252 (417)
T TIGR01035       228 -AVKF----ED----LEEYL----AEADIVISSTGAPH  252 (417)
T ss_pred             -EeeH----HH----HHHHH----hhCCEEEECCCCCC
Confidence             2221    11    21111    36899999998754

This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.

>TIGR00518 alaDH alanine dehydrogenase

Probab=97.85  E-value=0.00033  Score=65.26  Aligned_cols=96  Identities=24%  Similarity=0.323  Sum_probs=66.5

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHH-HcCCCeEEecCCCcccHHHHHHHHHHHcCCCccEEE
Q 017916          181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAK-ELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF  259 (364)
Q Consensus       181 ~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~-~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vi  259 (364)
                      ++.+|+|.|+|.+|+.+++.++.+|+ .|++++.+.++.+.+. .++......+. .    .+.+.+..    .++|++|
T Consensus       166 ~~~~VlViGaG~vG~~aa~~a~~lGa-~V~v~d~~~~~~~~l~~~~g~~v~~~~~-~----~~~l~~~l----~~aDvVI  235 (370)
T TIGR00518       166 EPGDVTIIGGGVVGTNAAKMANGLGA-TVTILDINIDRLRQLDAEFGGRIHTRYS-N----AYEIEDAV----KRADLLI  235 (370)
T ss_pred             CCceEEEEcCCHHHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHhcCceeEeccC-C----HHHHHHHH----ccCCEEE
Confidence            34569999999999999999999999 5888888888776654 45543222211 1    11222222    3689999


Q ss_pred             ECCC---C--HH-HHHHHHHhcccCCEEEEEcC
Q 017916          260 DCAG---F--NK-TMSTALSATRAGGKVCLVGM  286 (364)
Q Consensus       260 d~~g---~--~~-~~~~~~~~l~~~G~~v~~g~  286 (364)
                      +|++   .  +. .....++.+++++.+++++.
T Consensus       236 ~a~~~~g~~~p~lit~~~l~~mk~g~vIvDva~  268 (370)
T TIGR00518       236 GAVLIPGAKAPKLVSNSLVAQMKPGAVIVDVAI  268 (370)
T ss_pred             EccccCCCCCCcCcCHHHHhcCCCCCEEEEEec
Confidence            9973   2  11 23677888999999999874

The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.

>PLN02494 adenosylhomocysteinase

Probab=97.76  E-value=0.00043  Score=65.41  Aligned_cols=100  Identities=17%  Similarity=0.271  Sum_probs=75.7

Q ss_pred             HHHH-HHcC-CCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHH
Q 017916          171 LHAC-RRAN-IGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQ  248 (364)
Q Consensus       171 ~~~l-~~~~-~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~  248 (364)
                      +.++ +..+ .-.|++|+|.|.|.+|..+++.++.+|+ .|++++.++.+...+...|+..+        +..+    +.
T Consensus       241 ~d~i~r~t~i~LaGKtVvViGyG~IGr~vA~~aka~Ga-~VIV~e~dp~r~~eA~~~G~~vv--------~leE----al  307 (477)
T PLN02494        241 PDGLMRATDVMIAGKVAVICGYGDVGKGCAAAMKAAGA-RVIVTEIDPICALQALMEGYQVL--------TLED----VV  307 (477)
T ss_pred             HHHHHHhcCCccCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCchhhHHHHhcCCeec--------cHHH----HH
Confidence            4455 3333 3679999999999999999999999999 68888888877666666676421        1111    21


Q ss_pred             HHcCCCccEEEECCCCHHHH-HHHHHhcccCCEEEEEcCC
Q 017916          249 KAMGTGIDVSFDCAGFNKTM-STALSATRAGGKVCLVGMG  287 (364)
Q Consensus       249 ~~~~~~~d~vid~~g~~~~~-~~~~~~l~~~G~~v~~g~~  287 (364)
                          ...|++|++.|....+ ...++.|++++.++.+|..
T Consensus       308 ----~~ADVVI~tTGt~~vI~~e~L~~MK~GAiLiNvGr~  343 (477)
T PLN02494        308 ----SEADIFVTTTGNKDIIMVDHMRKMKNNAIVCNIGHF  343 (477)
T ss_pred             ----hhCCEEEECCCCccchHHHHHhcCCCCCEEEEcCCC
Confidence                2579999999976654 7899999999999999863

>PRK12771 putative glutamate synthase (NADPH) small subunit; Provisional

Probab=97.62  E-value=4.8e-05  Score=75.29  Aligned_cols=82  Identities=23%  Similarity=0.385  Sum_probs=56.7

Q ss_pred             CCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecC---------------------hhHHHHHHHcCCCeEEecCCC
Q 017916          178 NIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVD---------------------DYRLSVAKELGADNIVKVSTN  236 (364)
Q Consensus       178 ~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~---------------------~~~~~~~~~lg~~~~~~~~~~  236 (364)
                      ..++|++|+|.|+|+.|+++++.++..|++ |++++..                     +.+.+.++++|++..++... 
T Consensus       133 ~~~~g~~V~VIGaGpaGL~aA~~l~~~G~~-V~v~e~~~~~GG~l~~gip~~~~~~~~~~~~l~~~~~~Gv~~~~~~~~-  210 (564)
T PRK12771        133 APDTGKRVAVIGGGPAGLSAAYHLRRMGHA-VTIFEAGPKLGGMMRYGIPAYRLPREVLDAEIQRILDLGVEVRLGVRV-  210 (564)
T ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHCCCe-EEEEecCCCCCCeeeecCCCccCCHHHHHHHHHHHHHCCCEEEeCCEE-
Confidence            367899999999999999999999999995 6667632                     34566778899875544211 


Q ss_pred             cccHHHHHHHHHHHcCCCccEEEECCCCHHH
Q 017916          237 LQDIAEEVEKIQKAMGTGIDVSFDCAGFNKT  267 (364)
Q Consensus       237 ~~~~~~~i~~~~~~~~~~~d~vid~~g~~~~  267 (364)
                      ..+..  ....    ..++|++|+++|+...
T Consensus       211 ~~~~~--~~~~----~~~~D~Vi~AtG~~~~  235 (564)
T PRK12771        211 GEDIT--LEQL----EGEFDAVFVAIGAQLG  235 (564)
T ss_pred             CCcCC--HHHH----HhhCCEEEEeeCCCCC
Confidence            01211  1111    2368999999997543

>PRK00045 hemA glutamyl-tRNA reductase; Reviewed

Probab=97.59  E-value=0.00016  Score=68.75  Aligned_cols=160  Identities=19%  Similarity=0.274  Sum_probs=98.1

Q ss_pred             cccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCC
Q 017916           75 MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPD  154 (364)
Q Consensus        75 ~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~lP~  154 (364)
                      ..-|+|+++.+.+|+++.++.-+|+.=+      |+.|+..    ...|.+.+..+ ...++.|+++        +++|+
T Consensus        90 ~~~g~ea~~hl~~V~~GldS~V~GE~qI------lgQvk~a----~~~a~~~g~~g-~~l~~lf~~a--------~~~~k  150 (423)
T PRK00045         90 VHEGEEAVRHLFRVASGLDSMVLGEPQI------LGQVKDA----YALAQEAGTVG-TILNRLFQKA--------FSVAK  150 (423)
T ss_pred             hcCCHHHHHHHHHHHhhhhhhhcCChHH------HHHHHHH----HHHHHHcCCch-HHHHHHHHHH--------HHHHh
Confidence            4579999999999999988866666432      1222211    11111111111 0123444443        33444


Q ss_pred             CCCccchhhhhhhHHHHHHHHHcC----CCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHH-HHHHcCCCe
Q 017916          155 NVSLEEGAMCEPLSVGLHACRRAN----IGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLS-VAKELGADN  229 (364)
Q Consensus       155 ~~~~~~aa~~~~~~~a~~~l~~~~----~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~-~~~~lg~~~  229 (364)
                      .+..+.+..-.+.++++++++.+.    -.++.+|+|.|+|.+|.++++.++..|+..+++++++.++.. +++.+|.. 
T Consensus       151 ~v~~~t~i~~~~~Sv~~~Av~~a~~~~~~~~~~~vlViGaG~iG~~~a~~L~~~G~~~V~v~~r~~~ra~~la~~~g~~-  229 (423)
T PRK00045        151 RVRTETGIGAGAVSVASAAVELAKQIFGDLSGKKVLVIGAGEMGELVAKHLAEKGVRKITVANRTLERAEELAEEFGGE-  229 (423)
T ss_pred             hHhhhcCCCCCCcCHHHHHHHHHHHhhCCccCCEEEEECchHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcCCc-
Confidence            444444433346666777775432    257899999999999999999999999878888888887754 67778753 


Q ss_pred             EEecCCCcccHHHHHHHHHHHcCCCccEEEECCCCHH
Q 017916          230 IVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNK  266 (364)
Q Consensus       230 ~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid~~g~~~  266 (364)
                      ++.+    .+    ..+.    -.++|+||+|++++.
T Consensus       230 ~~~~----~~----~~~~----l~~aDvVI~aT~s~~  254 (423)
T PRK00045        230 AIPL----DE----LPEA----LAEADIVISSTGAPH  254 (423)
T ss_pred             EeeH----HH----HHHH----hccCCEEEECCCCCC
Confidence            2221    11    1111    136899999998754

>PRK00377 cbiT cobalt-precorrin-6Y C(15)-methyltransferase; Provisional

Probab=97.56  E-value=0.0019  Score=54.79  Aligned_cols=103  Identities=20%  Similarity=0.369  Sum_probs=71.2

Q ss_pred             HHHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCC-CEEEEEecChhHHHHHH----HcC-CCeEEecCCCcccHHHHHHHH
Q 017916          174 CRRANIGPETNVLIMGAGPIGLVTMLGARAFGA-PRIVIVDVDDYRLSVAK----ELG-ADNIVKVSTNLQDIAEEVEKI  247 (364)
Q Consensus       174 l~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~-~~vv~~~~~~~~~~~~~----~lg-~~~~~~~~~~~~~~~~~i~~~  247 (364)
                      +....+.++++||..|+|. |..++.+|+..+. ..+++++.+++..+.++    .++ ...+....   .+..+.+.. 
T Consensus        33 l~~l~~~~~~~vlDlG~Gt-G~~s~~~a~~~~~~~~v~avD~~~~~~~~a~~n~~~~g~~~~v~~~~---~d~~~~l~~-  107 (198)
T PRK00377         33 LSKLRLRKGDMILDIGCGT-GSVTVEASLLVGETGKVYAVDKDEKAINLTRRNAEKFGVLNNIVLIK---GEAPEILFT-  107 (198)
T ss_pred             HHHcCCCCcCEEEEeCCcC-CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhCCCCCeEEEE---echhhhHhh-
Confidence            4567889999999999877 8888899887643 47999999988877554    456 33332221   122222221 


Q ss_pred             HHHcCCCccEEEECCCC---HHHHHHHHHhcccCCEEEEE
Q 017916          248 QKAMGTGIDVSFDCAGF---NKTMSTALSATRAGGKVCLV  284 (364)
Q Consensus       248 ~~~~~~~~d~vid~~g~---~~~~~~~~~~l~~~G~~v~~  284 (364)
                         ....+|.||...+.   .+.+..+.+.|+|+|+++..
T Consensus       108 ---~~~~~D~V~~~~~~~~~~~~l~~~~~~LkpgG~lv~~  144 (198)
T PRK00377        108 ---INEKFDRIFIGGGSEKLKEIISASWEIIKKGGRIVID  144 (198)
T ss_pred             ---cCCCCCEEEECCCcccHHHHHHHHHHHcCCCcEEEEE
Confidence               23579999985542   45777889999999999864

>PRK08324 short chain dehydrogenase; Validated

Probab=97.52  E-value=0.0012  Score=66.86  Aligned_cols=140  Identities=23%  Similarity=0.280  Sum_probs=84.8

Q ss_pred             CcceeEEEecCCceEECCCCCCccchhhhhhhHHHHHHHHHcCCCCCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEec
Q 017916          136 GSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDV  214 (364)
Q Consensus       136 g~~~~~v~~~~~~~~~lP~~~~~~~aa~~~~~~~a~~~l~~~~~~~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~  214 (364)
                      -++++|..+++..++.+ +.++.++|.....        -.....+|+++||+|+ |.+|.+.++.+...|+ .|+.+++
T Consensus       385 ~~~~~~~~l~~~~~f~i-~~~~~e~a~l~~~--------~~~~~l~gk~vLVTGasggIG~~la~~L~~~Ga-~Vvl~~r  454 (681)
T PRK08324        385 EAVGRYEPLSEQEAFDI-EYWSLEQAKLQRM--------PKPKPLAGKVALVTGAAGGIGKATAKRLAAEGA-CVVLADL  454 (681)
T ss_pred             hhcCCccCCChhhhcce-eeehhhhhhhhcC--------CCCcCCCCCEEEEecCCCHHHHHHHHHHHHCcC-EEEEEeC
Confidence            45667777777777766 5555555542100        0122346899999997 9999999999999999 6777777


Q ss_pred             ChhHHHHH-HHcCC--C-eEEecCC-CcccHHHHHHHHHHHcCCCccEEEECCCC-------------------------
Q 017916          215 DDYRLSVA-KELGA--D-NIVKVST-NLQDIAEEVEKIQKAMGTGIDVSFDCAGF-------------------------  264 (364)
Q Consensus       215 ~~~~~~~~-~~lg~--~-~~~~~~~-~~~~~~~~i~~~~~~~~~~~d~vid~~g~-------------------------  264 (364)
                      +.++.+.+ +.++.  . ..+..+- ...++.+.+...... .+++|++|+++|.                         
T Consensus       455 ~~~~~~~~~~~l~~~~~v~~v~~Dvtd~~~v~~~~~~~~~~-~g~iDvvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~g~  533 (681)
T PRK08324        455 DEEAAEAAAAELGGPDRALGVACDVTDEAAVQAAFEEAALA-FGGVDIVVSNAGIAISGPIEETSDEDWRRSFDVNATGH  533 (681)
T ss_pred             CHHHHHHHHHHHhccCcEEEEEecCCCHHHHHHHHHHHHHH-cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHH
Confidence            77665543 33443  1 1222221 122333333333222 3479999999982                         


Q ss_pred             HHHHHHHHHhccc---CCEEEEEcC
Q 017916          265 NKTMSTALSATRA---GGKVCLVGM  286 (364)
Q Consensus       265 ~~~~~~~~~~l~~---~G~~v~~g~  286 (364)
                      ....+.+++.+++   +|+++.++.
T Consensus       534 ~~l~~~~~~~l~~~~~~g~iV~vsS  558 (681)
T PRK08324        534 FLVAREAVRIMKAQGLGGSIVFIAS  558 (681)
T ss_pred             HHHHHHHHHHHHhcCCCcEEEEECC
Confidence            1233445666655   588988874

>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit

Probab=97.46  E-value=0.0029  Score=56.84  Aligned_cols=111  Identities=17%  Similarity=0.178  Sum_probs=75.8

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcCCCccEEEE
Q 017916          181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  260 (364)
Q Consensus       181 ~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid  260 (364)
                      .|.+|+|.|.|.+|.++++.++.+|+ .|.+.+++.++...+..+|...+ .+    .+    +.+.    -.+.|++|+
T Consensus       150 ~gk~v~IiG~G~iG~avA~~L~~~G~-~V~v~~R~~~~~~~~~~~g~~~~-~~----~~----l~~~----l~~aDiVin  215 (287)
T TIGR02853       150 HGSNVMVLGFGRTGMTIARTFSALGA-RVFVGARSSADLARITEMGLIPF-PL----NK----LEEK----VAEIDIVIN  215 (287)
T ss_pred             CCCEEEEEcChHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHCCCeee-cH----HH----HHHH----hccCCEEEE
Confidence            47899999999999999999999999 67788888777666666665321 11    11    2222    147899999


Q ss_pred             CCCCHHHHHHHHHhcccCCEEEEEcCCCCCccccchhhhhcCcEEEe
Q 017916          261 CAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAVREVDVVG  307 (364)
Q Consensus       261 ~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~  307 (364)
                      ++...-.-...++.++++..++.++.......+  ...-.++++...
T Consensus       216 t~P~~ii~~~~l~~~k~~aliIDlas~Pg~tdf--~~Ak~~G~~a~~  260 (287)
T TIGR02853       216 TIPALVLTADVLSKLPKHAVIIDLASKPGGTDF--EYAKKRGIKALL  260 (287)
T ss_pred             CCChHHhCHHHHhcCCCCeEEEEeCcCCCCCCH--HHHHHCCCEEEE
Confidence            987432234577888988888888765544333  444455555553

This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.

>PTZ00075 Adenosylhomocysteinase; Provisional

Probab=97.34  E-value=0.0016  Score=61.71  Aligned_cols=92  Identities=21%  Similarity=0.299  Sum_probs=70.7

Q ss_pred             CCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcCCCccEE
Q 017916          179 IGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVS  258 (364)
Q Consensus       179 ~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~v  258 (364)
                      .-.|.+|+|.|.|.+|..+++.++.+|+ .|++++.++.+...+...|+.. .       ++    .++.    ...|++
T Consensus       251 ~LaGKtVgVIG~G~IGr~vA~rL~a~Ga-~ViV~e~dp~~a~~A~~~G~~~-~-------~l----eell----~~ADIV  313 (476)
T PTZ00075        251 MIAGKTVVVCGYGDVGKGCAQALRGFGA-RVVVTEIDPICALQAAMEGYQV-V-------TL----EDVV----ETADIF  313 (476)
T ss_pred             CcCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCchhHHHHHhcCcee-c-------cH----HHHH----hcCCEE
Confidence            4579999999999999999999999999 6788877766654444556532 1       11    1221    368999


Q ss_pred             EECCCCHHHHH-HHHHhcccCCEEEEEcCC
Q 017916          259 FDCAGFNKTMS-TALSATRAGGKVCLVGMG  287 (364)
Q Consensus       259 id~~g~~~~~~-~~~~~l~~~G~~v~~g~~  287 (364)
                      +.+.|....+. ..++.|++++.++.+|..
T Consensus       314 I~atGt~~iI~~e~~~~MKpGAiLINvGr~  343 (476)
T PTZ00075        314 VTATGNKDIITLEHMRRMKNNAIVGNIGHF  343 (476)
T ss_pred             EECCCcccccCHHHHhccCCCcEEEEcCCC
Confidence            99999777665 799999999999998854

>COG2242 CobL Precorrin-6B methylase 2 [Coenzyme metabolism]

Probab=97.34  E-value=0.0042  Score=51.05  Aligned_cols=102  Identities=22%  Similarity=0.324  Sum_probs=71.0

Q ss_pred             HHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHH----HHcCCCeEEecCCCcccHHHHHHHHHHH
Q 017916          175 RRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA----KELGADNIVKVSTNLQDIAEEVEKIQKA  250 (364)
Q Consensus       175 ~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~----~~lg~~~~~~~~~~~~~~~~~i~~~~~~  250 (364)
                      ....+++|+.++=.|+|. |..++++|+.-...++++++.++++.++.    ++||.+.+.......+   +.+..    
T Consensus        28 s~L~~~~g~~l~DIGaGt-Gsi~iE~a~~~p~~~v~AIe~~~~a~~~~~~N~~~fg~~n~~vv~g~Ap---~~L~~----   99 (187)
T COG2242          28 SKLRPRPGDRLWDIGAGT-GSITIEWALAGPSGRVIAIERDEEALELIERNAARFGVDNLEVVEGDAP---EALPD----   99 (187)
T ss_pred             HhhCCCCCCEEEEeCCCc-cHHHHHHHHhCCCceEEEEecCHHHHHHHHHHHHHhCCCcEEEEeccch---HhhcC----
Confidence            557789999877778754 66788888655555899999999887665    4588876554433222   22211    


Q ss_pred             cCCCccEEEECCC--CHHHHHHHHHhcccCCEEEEEc
Q 017916          251 MGTGIDVSFDCAG--FNKTMSTALSATRAGGKVCLVG  285 (364)
Q Consensus       251 ~~~~~d~vid~~g--~~~~~~~~~~~l~~~G~~v~~g  285 (364)
                       -..+|.+|--=|  -.+.++.+|..|+++|+++.-.
T Consensus       100 -~~~~daiFIGGg~~i~~ile~~~~~l~~ggrlV~na  135 (187)
T COG2242         100 -LPSPDAIFIGGGGNIEEILEAAWERLKPGGRLVANA  135 (187)
T ss_pred             -CCCCCEEEECCCCCHHHHHHHHHHHcCcCCeEEEEe
Confidence             126899885322  2578889999999999999754

>PRK13943 protein-L-isoaspartate O-methyltransferase; Provisional

Probab=97.26  E-value=0.0043  Score=56.49  Aligned_cols=103  Identities=24%  Similarity=0.310  Sum_probs=72.5

Q ss_pred             HHHHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCC-CEEEEEecChhHHHHHH----HcCCCeEEecCCCcccHHHHHHHH
Q 017916          173 ACRRANIGPETNVLIMGAGPIGLVTMLGARAFGA-PRIVIVDVDDYRLSVAK----ELGADNIVKVSTNLQDIAEEVEKI  247 (364)
Q Consensus       173 ~l~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~-~~vv~~~~~~~~~~~~~----~lg~~~~~~~~~~~~~~~~~i~~~  247 (364)
                      .++...++++++||..|+| .|..++.+++..+. ..|++++.+++..+.++    ++|.+.+....   .|..+.+.. 
T Consensus        72 ll~~L~i~~g~~VLDIG~G-tG~~a~~LA~~~~~~g~VvgVDis~~~l~~Ar~~l~~~g~~nV~~i~---gD~~~~~~~-  146 (322)
T PRK13943         72 FMEWVGLDKGMRVLEIGGG-TGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVRRLGIENVIFVC---GDGYYGVPE-  146 (322)
T ss_pred             HHHhcCCCCCCEEEEEeCC-ccHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEe---CChhhcccc-
Confidence            3456778899999999987 48999999998764 36889999887665544    46665443321   222221111 


Q ss_pred             HHHcCCCccEEEECCCCHHHHHHHHHhcccCCEEEEE
Q 017916          248 QKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLV  284 (364)
Q Consensus       248 ~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~  284 (364)
                          ...+|+|+.+.+........++.|+++|+++..
T Consensus       147 ----~~~fD~Ii~~~g~~~ip~~~~~~LkpgG~Lvv~  179 (322)
T PRK13943        147 ----FAPYDVIFVTVGVDEVPETWFTQLKEGGRVIVP  179 (322)
T ss_pred             ----cCCccEEEECCchHHhHHHHHHhcCCCCEEEEE
Confidence                246999999888666667789999999998763

>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=97.25  E-value=0.0098  Score=51.72  Aligned_cols=104  Identities=21%  Similarity=0.216  Sum_probs=64.5

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHH-HHcC---CCeEEecCC-CcccHHHHHHHHHHHcCCC
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KELG---ADNIVKVST-NLQDIAEEVEKIQKAMGTG  254 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~-~~lg---~~~~~~~~~-~~~~~~~~i~~~~~~~~~~  254 (364)
                      .+++|||+|+ |.+|..+++.+...|+ .|+.+++++++.+.+ +.+.   ....+..+- ..+++.+.++..... -++
T Consensus         4 ~~~~vlItGa~g~iG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-~~~   81 (238)
T PRK05786          4 KGKKVAIIGVSEGLGYAVAYFALKEGA-QVCINSRNENKLKRMKKTLSKYGNIHYVVGDVSSTESARNVIEKAAKV-LNA   81 (238)
T ss_pred             CCcEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEECCCCCHHHHHHHHHHHHHH-hCC
Confidence            4679999998 9999999999999999 567777777665544 3332   222222221 122333333332221 246


Q ss_pred             ccEEEECCCCH-----------------------HHHHHHHHhcccCCEEEEEcC
Q 017916          255 IDVSFDCAGFN-----------------------KTMSTALSATRAGGKVCLVGM  286 (364)
Q Consensus       255 ~d~vid~~g~~-----------------------~~~~~~~~~l~~~G~~v~~g~  286 (364)
                      +|.++.+.|..                       ...+..+..++++|+++.++.
T Consensus        82 id~ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss  136 (238)
T PRK05786         82 IDGLVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLKEGSSIVLVSS  136 (238)
T ss_pred             CCEEEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHhcCCEEEEEec
Confidence            89999888731                       123445566677888888874

>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]

Probab=97.25  E-value=0.0032  Score=55.27  Aligned_cols=84  Identities=26%  Similarity=0.324  Sum_probs=57.0

Q ss_pred             CCCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHH-HHcC----CC-eEEecCCCcccHHHHHHHHHHHcC
Q 017916          180 GPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KELG----AD-NIVKVSTNLQDIAEEVEKIQKAMG  252 (364)
Q Consensus       180 ~~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~-~~lg----~~-~~~~~~~~~~~~~~~i~~~~~~~~  252 (364)
                      ..+.++||+|| +++|...+..+...|+ .++.+.++.+|.+.+ +++.    .. .++..|-...+-.+.+.+.....+
T Consensus         4 ~~~~~~lITGASsGIG~~~A~~lA~~g~-~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~~~~~~~l~~~l~~~~   82 (265)
T COG0300           4 MKGKTALITGASSGIGAELAKQLARRGY-NLILVARREDKLEALAKELEDKTGVEVEVIPADLSDPEALERLEDELKERG   82 (265)
T ss_pred             CCCcEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCChhHHHHHHHHHHhcC
Confidence            46789999999 9999999999999999 577777888887654 3443    21 244444333333333333333334


Q ss_pred             CCccEEEECCCC
Q 017916          253 TGIDVSFDCAGF  264 (364)
Q Consensus       253 ~~~d~vid~~g~  264 (364)
                      ..+|+.|+++|-
T Consensus        83 ~~IdvLVNNAG~   94 (265)
T COG0300          83 GPIDVLVNNAGF   94 (265)
T ss_pred             CcccEEEECCCc
Confidence            589999999984

>TIGR00406 prmA ribosomal protein L11 methyltransferase

Probab=97.23  E-value=0.0032  Score=56.69  Aligned_cols=96  Identities=19%  Similarity=0.297  Sum_probs=62.9

Q ss_pred             CCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHc----CCCe-EEecCCCcccHHHHHHHHHHHcCC
Q 017916          179 IGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKEL----GADN-IVKVSTNLQDIAEEVEKIQKAMGT  253 (364)
Q Consensus       179 ~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~l----g~~~-~~~~~~~~~~~~~~i~~~~~~~~~  253 (364)
                      .+++++||-.|+|. |..++.+++ +|+..+++++.++...+.+++.    +... +.....   +.    .   .....
T Consensus       157 ~~~g~~VLDvGcGs-G~lai~aa~-~g~~~V~avDid~~al~~a~~n~~~n~~~~~~~~~~~---~~----~---~~~~~  224 (288)
T TIGR00406       157 DLKDKNVIDVGCGS-GILSIAALK-LGAAKVVGIDIDPLAVESARKNAELNQVSDRLQVKLI---YL----E---QPIEG  224 (288)
T ss_pred             cCCCCEEEEeCCCh-hHHHHHHHH-cCCCeEEEEECCHHHHHHHHHHHHHcCCCcceEEEec---cc----c---cccCC
Confidence            45789999999876 777766665 5777899999998877666542    2221 111111   10    0   01135


Q ss_pred             CccEEEECCCCH---HHHHHHHHhcccCCEEEEEcC
Q 017916          254 GIDVSFDCAGFN---KTMSTALSATRAGGKVCLVGM  286 (364)
Q Consensus       254 ~~d~vid~~g~~---~~~~~~~~~l~~~G~~v~~g~  286 (364)
                      ++|+|+......   ..+..+.+.|+|+|+++..|.
T Consensus       225 ~fDlVvan~~~~~l~~ll~~~~~~LkpgG~li~sgi  260 (288)
T TIGR00406       225 KADVIVANILAEVIKELYPQFSRLVKPGGWLILSGI  260 (288)
T ss_pred             CceEEEEecCHHHHHHHHHHHHHHcCCCcEEEEEeC
Confidence            799998755422   455677899999999998764

Ribosomal protein L11 methyltransferase is an S-adenosyl-L-methionine-dependent methyltransferase required for the modification of ribosomal protein L11. This protein is found in bacteria and (with a probable transit peptide) in Arabidopsis.

>PF01135 PCMT: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); InterPro: IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (2

Probab=97.19  E-value=0.0014  Score=55.85  Aligned_cols=103  Identities=22%  Similarity=0.273  Sum_probs=67.8

Q ss_pred             HHHHHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCC-EEEEEecChhHHHH----HHHcCCCeEEecC-CCcccHHHHHH
Q 017916          172 HACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAP-RIVIVDVDDYRLSV----AKELGADNIVKVS-TNLQDIAEEVE  245 (364)
Q Consensus       172 ~~l~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~-~vv~~~~~~~~~~~----~~~lg~~~~~~~~-~~~~~~~~~i~  245 (364)
                      .+++...+++|++||-.|+|. |..++-+++..|.. .|++++..++-.+.    ++.++...+.... +....      
T Consensus        63 ~~l~~L~l~pg~~VLeIGtGs-GY~aAlla~lvg~~g~Vv~vE~~~~l~~~A~~~l~~~~~~nv~~~~gdg~~g------  135 (209)
T PF01135_consen   63 RMLEALDLKPGDRVLEIGTGS-GYQAALLAHLVGPVGRVVSVERDPELAERARRNLARLGIDNVEVVVGDGSEG------  135 (209)
T ss_dssp             HHHHHTTC-TT-EEEEES-TT-SHHHHHHHHHHSTTEEEEEEESBHHHHHHHHHHHHHHTTHSEEEEES-GGGT------
T ss_pred             HHHHHHhcCCCCEEEEecCCC-cHHHHHHHHhcCccceEEEECccHHHHHHHHHHHHHhccCceeEEEcchhhc------
Confidence            356778899999999999765 88888999888764 48888877754433    4456765432211 11111      


Q ss_pred             HHHHHcCCCccEEEECCCCHHHHHHHHHhcccCCEEEEE
Q 017916          246 KIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLV  284 (364)
Q Consensus       246 ~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~  284 (364)
                       +.  ...+||.|+-+.+.++.-...++.|++||+++..
T Consensus       136 -~~--~~apfD~I~v~~a~~~ip~~l~~qL~~gGrLV~p  171 (209)
T PF01135_consen  136 -WP--EEAPFDRIIVTAAVPEIPEALLEQLKPGGRLVAP  171 (209)
T ss_dssp             -TG--GG-SEEEEEESSBBSS--HHHHHTEEEEEEEEEE
T ss_pred             -cc--cCCCcCEEEEeeccchHHHHHHHhcCCCcEEEEE
Confidence             11  1357999998888777777899999999999974

1.1.77 from EC) (PCMT) [] (which is also known as L-isoaspartyl protein carboxyl methyltransferase) is an enzyme that catalyses the transfer of a methyl group from S-adenosylmethionine to the free carboxyl groups of D-aspartyl or L-isoaspartyl residues in a variety of peptides and proteins. The enzyme does not act on normal L-aspartyl residues L-isoaspartyl and D-aspartyl are the products of the spontaneous deamidation and/or isomerisation of normal L-aspartyl and L-asparaginyl residues in proteins. PCMT plays a role in the repair and/or degradation of these damaged proteins; the enzymatic methyl esterification of the abnormal residues can lead to their conversion to normal L-aspartyl residues. The SAM domain is present in most of these proteins.; GO: 0004719 protein-L-isoaspartate (D-aspartate) O-methyltransferase activity, 0006464 protein modification process; PDB: 3LBF_A 1DL5_B 1JG3_B 1JG2_A 1JG1_A 1JG4_A 2YXE_A 2PBF_B 1VBF_C 1R18_A ....

>TIGR02469 CbiT precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit

Probab=97.16  E-value=0.012  Score=45.28  Aligned_cols=102  Identities=24%  Similarity=0.335  Sum_probs=67.8

Q ss_pred             HHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHH----HcCCCeEEecCCCcccHHHHHHHHHHH
Q 017916          175 RRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAK----ELGADNIVKVSTNLQDIAEEVEKIQKA  250 (364)
Q Consensus       175 ~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~----~lg~~~~~~~~~~~~~~~~~i~~~~~~  250 (364)
                      ....++++++||-.|+|. |..+..+++..+...+++++.++...+.++    .++...+.....   +.......    
T Consensus        13 ~~~~~~~~~~vldlG~G~-G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~---~~~~~~~~----   84 (124)
T TIGR02469        13 SKLRLRPGDVLWDIGAGS-GSITIEAARLVPNGRVYAIERNPEALRLIERNARRFGVSNIVIVEG---DAPEALED----   84 (124)
T ss_pred             HHcCCCCCCEEEEeCCCC-CHHHHHHHHHCCCceEEEEcCCHHHHHHHHHHHHHhCCCceEEEec---cccccChh----
Confidence            456677888999999866 888889998876568999999888776654    344432221111   11000111    


Q ss_pred             cCCCccEEEECCCC---HHHHHHHHHhcccCCEEEEE
Q 017916          251 MGTGIDVSFDCAGF---NKTMSTALSATRAGGKVCLV  284 (364)
Q Consensus       251 ~~~~~d~vid~~g~---~~~~~~~~~~l~~~G~~v~~  284 (364)
                      ....+|+|+...+.   .+.++.+.+.|+++|+++..
T Consensus        85 ~~~~~D~v~~~~~~~~~~~~l~~~~~~Lk~gG~li~~  121 (124)
T TIGR02469        85 SLPEPDRVFIGGSGGLLQEILEAIWRRLRPGGRIVLN  121 (124)
T ss_pred             hcCCCCEEEECCcchhHHHHHHHHHHHcCCCCEEEEE
Confidence            13579999875432   34778899999999998864

This model recognizes the CbiT methylase which is responsible, in part (along with CbiE), for methylating precorrin-6y (or cobalt-precorrin-6y) at both the 5 and 15 positions as well as the concomitant decarbozylation at C-12. In many organisms, this protein is fused to the CbiE subunit. The fused protein, when found in organisms catalyzing the oxidative version of the cobalamin biosynthesis pathway, is called CobL.

>PRK05993 short chain dehydrogenase; Provisional

Probab=97.16  E-value=0.0043  Score=55.52  Aligned_cols=81  Identities=17%  Similarity=0.258  Sum_probs=54.4

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeE-EecCCCcccHHHHHHHHHHHcCCCccEE
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNI-VKVSTNLQDIAEEVEKIQKAMGTGIDVS  258 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~d~v  258 (364)
                      .+.+|||+|+ |.+|.+.++.+...|+ .|++++++.++.+.+...+...+ .|+. ..+++.+.+.......++.+|++
T Consensus         3 ~~k~vlItGasggiG~~la~~l~~~G~-~Vi~~~r~~~~~~~l~~~~~~~~~~Dl~-d~~~~~~~~~~~~~~~~g~id~l   80 (277)
T PRK05993          3 MKRSILITGCSSGIGAYCARALQSDGW-RVFATCRKEEDVAALEAEGLEAFQLDYA-EPESIAALVAQVLELSGGRLDAL   80 (277)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHCCceEEEccCC-CHHHHHHHHHHHHHHcCCCccEE
Confidence            4578999998 9999999999888999 57777787777766665554432 2221 22333333444333334579999


Q ss_pred             EECCC
Q 017916          259 FDCAG  263 (364)
Q Consensus       259 id~~g  263 (364)
                      |+++|
T Consensus        81 i~~Ag   85 (277)
T PRK05993         81 FNNGA   85 (277)
T ss_pred             EECCC
Confidence            99876

>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases

Probab=97.10  E-value=0.0035  Score=49.55  Aligned_cols=74  Identities=20%  Similarity=0.271  Sum_probs=53.5

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHH-HHcCCC--eEEecCCCcccHHHHHHHHHHHcCCCcc
Q 017916          180 GPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KELGAD--NIVKVSTNLQDIAEEVEKIQKAMGTGID  256 (364)
Q Consensus       180 ~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~-~~lg~~--~~~~~~~~~~~~~~~i~~~~~~~~~~~d  256 (364)
                      -.+.++||.|+|+.|.+++..+...|++.+.++.++.+|.+.+ +.++..  ..+.+++    +.    ..    -..+|
T Consensus        10 l~~~~vlviGaGg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~~~~~~~~~~~~~----~~----~~----~~~~D   77 (135)
T PF01488_consen   10 LKGKRVLVIGAGGAARAVAAALAALGAKEITIVNRTPERAEALAEEFGGVNIEAIPLED----LE----EA----LQEAD   77 (135)
T ss_dssp             GTTSEEEEESSSHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHHTGCSEEEEEGGG----HC----HH----HHTES
T ss_pred             cCCCEEEEECCHHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHcCccccceeeHHH----HH----HH----HhhCC
Confidence            3588999999999999999999999999899999988876544 566432  2333322    11    11    13699


Q ss_pred             EEEECCCCH
Q 017916          257 VSFDCAGFN  265 (364)
Q Consensus       257 ~vid~~g~~  265 (364)
                      ++|+|++.+
T Consensus        78 ivI~aT~~~   86 (135)
T PF01488_consen   78 IVINATPSG   86 (135)
T ss_dssp             EEEE-SSTT
T ss_pred             eEEEecCCC
Confidence            999998864

Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....

>PRK13942 protein-L-isoaspartate O-methyltransferase; Provisional

Probab=97.07  E-value=0.012  Score=50.41  Aligned_cols=103  Identities=19%  Similarity=0.243  Sum_probs=69.1

Q ss_pred             HHHHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCC-CEEEEEecChhHHHHHHH----cCCCeEEecCCCcccHHHHHHHH
Q 017916          173 ACRRANIGPETNVLIMGAGPIGLVTMLGARAFGA-PRIVIVDVDDYRLSVAKE----LGADNIVKVSTNLQDIAEEVEKI  247 (364)
Q Consensus       173 ~l~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~-~~vv~~~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~i~~~  247 (364)
                      .++...++++++||-.|+|. |..+..+++..+. ..|++++.+++-.+.+++    +|...+.....   |....   +
T Consensus        68 ~~~~l~~~~g~~VLdIG~Gs-G~~t~~la~~~~~~~~V~~vE~~~~~~~~a~~~l~~~g~~~v~~~~g---d~~~~---~  140 (212)
T PRK13942         68 MCELLDLKEGMKVLEIGTGS-GYHAAVVAEIVGKSGKVVTIERIPELAEKAKKTLKKLGYDNVEVIVG---DGTLG---Y  140 (212)
T ss_pred             HHHHcCCCCcCEEEEECCcc-cHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEEC---CcccC---C
Confidence            44667889999999998765 7778888887764 379999998877766543    45432211111   10000   0


Q ss_pred             HHHcCCCccEEEECCCCHHHHHHHHHhcccCCEEEEE
Q 017916          248 QKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLV  284 (364)
Q Consensus       248 ~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~  284 (364)
                      .  ....+|+|+-..........+++.|+++|+++..
T Consensus       141 ~--~~~~fD~I~~~~~~~~~~~~l~~~LkpgG~lvi~  175 (212)
T PRK13942        141 E--ENAPYDRIYVTAAGPDIPKPLIEQLKDGGIMVIP  175 (212)
T ss_pred             C--cCCCcCEEEECCCcccchHHHHHhhCCCcEEEEE
Confidence            0  1357999976555566777899999999998875

>PRK12742 oxidoreductase; Provisional

Probab=97.05  E-value=0.013  Score=50.97  Aligned_cols=79  Identities=22%  Similarity=0.239  Sum_probs=48.0

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHH-HHHHcCCCeEEecCCCcccHHHHHHHHHHHcCCCccEE
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLS-VAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVS  258 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~-~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~v  258 (364)
                      ++.+|||+|+ |.+|.+.++.+...|+++++...++.++.+ +..+++... +..+-.  +.. .+.++.+. .+++|++
T Consensus         5 ~~k~vlItGasggIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~~~~~~-~~~D~~--~~~-~~~~~~~~-~~~id~l   79 (237)
T PRK12742          5 TGKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAERLAQETGATA-VQTDSA--DRD-AVIDVVRK-SGALDIL   79 (237)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHhCCeE-EecCCC--CHH-HHHHHHHH-hCCCcEE
Confidence            4689999998 999999999999999954333333444433 334556542 222222  211 23333222 2469999


Q ss_pred             EECCCC
Q 017916          259 FDCAGF  264 (364)
Q Consensus       259 id~~g~  264 (364)
                      |+++|.
T Consensus        80 i~~ag~   85 (237)
T PRK12742         80 VVNAGI   85 (237)
T ss_pred             EECCCC
Confidence            999874

>COG3288 PntA NAD/NADP transhydrogenase alpha subunit [Energy production and conversion]

Probab=97.01  E-value=0.0071  Score=53.33  Aligned_cols=131  Identities=16%  Similarity=0.240  Sum_probs=90.2

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecC---------CCcccHHHHHHHHHHH
Q 017916          180 GPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVS---------TNLQDIAEEVEKIQKA  250 (364)
Q Consensus       180 ~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~---------~~~~~~~~~i~~~~~~  250 (364)
                      -++.++|+.|.|..|++++..++..|+ .|..-+....+.+..+.+|+...-.-+         .-+++|.+.-.++...
T Consensus       162 v~pA~vlv~G~Gvagl~aiata~~lG~-iVt~rdlrm~~Keqv~s~Ga~f~~~~~ee~~gGYAk~ms~~~~~~q~~~~a~  240 (356)
T COG3288         162 VSPAKVLVIGAGVAGLAAIATAVRLGA-IVTARDLRMFKKEQVESLGAKFLAVEDEESAGGYAKEMSEEFIAKQAELVAE  240 (356)
T ss_pred             ccchhhhhhhHHHHHHHHHHHHhhcce-EEehhhhhhHHhhhhhhcccccccccccccCCCccccCCHHHHHHHHHHHHH
Confidence            466788999999999999999999999 666666777888888888865321111         1234555544444444


Q ss_pred             cCCCccEEEECCCC-----H-HHHHHHHHhcccCCEEEEEcCC-CCCc--cccchhhhhcCcEEEeeccC
Q 017916          251 MGTGIDVSFDCAGF-----N-KTMSTALSATRAGGKVCLVGMG-HHEM--TVPLTPAAVREVDVVGVFRY  311 (364)
Q Consensus       251 ~~~~~d~vid~~g~-----~-~~~~~~~~~l~~~G~~v~~g~~-~~~~--~~~~~~~~~~~~~~~~~~~~  311 (364)
                      .-.++|+||-+.-.     + -....+...|+||+.++++... +++.  ..+-.-...++++++|..+.
T Consensus       241 ~~~~~DivITTAlIPGrpAP~Lvt~~mv~sMkpGSViVDlAa~~GGNce~t~pg~~v~~~gV~iig~~nl  310 (356)
T COG3288         241 QAKEVDIVITTALIPGRPAPKLVTAEMVASMKPGSVIVDLAAETGGNCELTEPGKVVTKNGVKIIGYTNL  310 (356)
T ss_pred             HhcCCCEEEEecccCCCCCchhhHHHHHHhcCCCcEEEEehhhcCCCcccccCCeEEEeCCeEEEeecCc
Confidence            45789999987642     1 3445799999999999999732 2222  22223456788999997765

>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

Probab=96.98  E-value=0.0075  Score=50.16  Aligned_cols=81  Identities=23%  Similarity=0.325  Sum_probs=57.0

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCC---eEEecCCCcccHHHHHHHHHHHcCCCcc
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGAD---NIVKVSTNLQDIAEEVEKIQKAMGTGID  256 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~---~~~~~~~~~~~~~~~i~~~~~~~~~~~d  256 (364)
                      .|.+|||+|+ +++|++.++-...+|- .|+++.++.++.+.++.....   .+.|.  .+.+-...+-+|.+..-...+
T Consensus         4 tgnTiLITGG~sGIGl~lak~f~elgN-~VIi~gR~e~~L~e~~~~~p~~~t~v~Dv--~d~~~~~~lvewLkk~~P~lN   80 (245)
T COG3967           4 TGNTILITGGASGIGLALAKRFLELGN-TVIICGRNEERLAEAKAENPEIHTEVCDV--ADRDSRRELVEWLKKEYPNLN   80 (245)
T ss_pred             cCcEEEEeCCcchhhHHHHHHHHHhCC-EEEEecCcHHHHHHHHhcCcchheeeecc--cchhhHHHHHHHHHhhCCchh
Confidence            4789999976 9999999998889998 678888899998888764432   23332  223333344445444445689


Q ss_pred             EEEECCCC
Q 017916          257 VSFDCAGF  264 (364)
Q Consensus       257 ~vid~~g~  264 (364)
                      ++++++|-
T Consensus        81 vliNNAGI   88 (245)
T COG3967          81 VLINNAGI   88 (245)
T ss_pred             eeeecccc
Confidence            99998874

>PF12847 Methyltransf_18: Methyltransferase domain; PDB: 3G2Q_A 3G2O_A 3G2M_B 3G2P_B 3D2L_B 1IM8_B 3NJR_A 3E05_H 3EVZ_A 3HM2_A

Probab=96.92  E-value=0.0043  Score=47.02  Aligned_cols=94  Identities=28%  Similarity=0.393  Sum_probs=62.7

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHH-CCCCEEEEEecChhHHHHHHHc----CC-CeEEecCCCcccHHHHHHHHHHHcCCC
Q 017916          181 PETNVLIMGAGPIGLVTMLGARA-FGAPRIVIVDVDDYRLSVAKEL----GA-DNIVKVSTNLQDIAEEVEKIQKAMGTG  254 (364)
Q Consensus       181 ~g~~VLI~Gag~~G~~ai~la~~-~g~~~vv~~~~~~~~~~~~~~l----g~-~~~~~~~~~~~~~~~~i~~~~~~~~~~  254 (364)
                      ||.+||-.|+|. |..++.+++. .++ .+++++.+++..+.+++.    +. ..+..+.   .++ .    .......+
T Consensus         1 p~~~vLDlGcG~-G~~~~~l~~~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~---~d~-~----~~~~~~~~   70 (112)
T PF12847_consen    1 PGGRVLDLGCGT-GRLSIALARLFPGA-RVVGVDISPEMLEIARERAAEEGLSDRITFVQ---GDA-E----FDPDFLEP   70 (112)
T ss_dssp             TTCEEEEETTTT-SHHHHHHHHHHTTS-EEEEEESSHHHHHHHHHHHHHTTTTTTEEEEE---SCC-H----GGTTTSSC
T ss_pred             CCCEEEEEcCcC-CHHHHHHHhcCCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCCeEEEE---Ccc-c----cCcccCCC
Confidence            688999999765 7788888885 566 799999999888877652    22 2222111   222 1    11112457


Q ss_pred             ccEEEECC-CC---H------HHHHHHHHhcccCCEEEEE
Q 017916          255 IDVSFDCA-GF---N------KTMSTALSATRAGGKVCLV  284 (364)
Q Consensus       255 ~d~vid~~-g~---~------~~~~~~~~~l~~~G~~v~~  284 (364)
                      +|+|+... ..   .      ..++.+.+.|+|+|+++.-
T Consensus        71 ~D~v~~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~lvi~  110 (112)
T PF12847_consen   71 FDLVICSGFTLHFLLPLDERRRVLERIRRLLKPGGRLVIN  110 (112)
T ss_dssp             EEEEEECSGSGGGCCHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             CCEEEECCCccccccchhHHHHHHHHHHHhcCCCcEEEEE
Confidence            99999866 21   1      2478899999999998863

...

>TIGR00080 pimt protein-L-isoaspartate(D-aspartate) O-methyltransferase

Probab=96.88  E-value=0.019  Score=49.38  Aligned_cols=103  Identities=19%  Similarity=0.222  Sum_probs=67.3

Q ss_pred             HHHHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCC-CEEEEEecChhHHHHHH----HcCCCeEEecCCCcccHHHHHHHH
Q 017916          173 ACRRANIGPETNVLIMGAGPIGLVTMLGARAFGA-PRIVIVDVDDYRLSVAK----ELGADNIVKVSTNLQDIAEEVEKI  247 (364)
Q Consensus       173 ~l~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~-~~vv~~~~~~~~~~~~~----~lg~~~~~~~~~~~~~~~~~i~~~  247 (364)
                      .++...++++++||-.|+|. |..++.+++..+. ..|++++.+++..+.++    ++|.+.+.....   +..+..   
T Consensus        69 ~~~~l~~~~~~~VLDiG~Gs-G~~a~~la~~~~~~g~V~~vD~~~~~~~~A~~~~~~~g~~~v~~~~~---d~~~~~---  141 (215)
T TIGR00080        69 MTELLELKPGMKVLEIGTGS-GYQAAVLAEIVGRDGLVVSIERIPELAEKAERRLRKLGLDNVIVIVG---DGTQGW---  141 (215)
T ss_pred             HHHHhCCCCcCEEEEECCCc-cHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCeEEEEC---CcccCC---
Confidence            44667789999999998755 6677788887653 25899998887766554    345543221111   111100   


Q ss_pred             HHHcCCCccEEEECCCCHHHHHHHHHhcccCCEEEEE
Q 017916          248 QKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLV  284 (364)
Q Consensus       248 ~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~  284 (364)
                      .  ....||+|+-..........+.+.|+++|+++..
T Consensus       142 ~--~~~~fD~Ii~~~~~~~~~~~~~~~L~~gG~lv~~  176 (215)
T TIGR00080       142 E--PLAPYDRIYVTAAGPKIPEALIDQLKEGGILVMP  176 (215)
T ss_pred             c--ccCCCCEEEEcCCcccccHHHHHhcCcCcEEEEE
Confidence            0  1247999885544456667888999999998864

Among the prokaryotes, the gene name is pcm. Among eukaryotes, pimt.

>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

Probab=96.78  E-value=0.013  Score=50.34  Aligned_cols=81  Identities=27%  Similarity=0.366  Sum_probs=56.6

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHH-HHcCC----CeEEecCCCcccHHHHHHHHHHHcCCC
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KELGA----DNIVKVSTNLQDIAEEVEKIQKAMGTG  254 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~-~~lg~----~~~~~~~~~~~~~~~~i~~~~~~~~~~  254 (364)
                      .++.++|+|| +++|.+.++.....|+ .++.+.+..++++.+ .+++.    ...+|. .+..+..+.+..+... -++
T Consensus         5 ~~kv~lITGASSGiG~A~A~~l~~~G~-~vvl~aRR~drL~~la~~~~~~~~~~~~~DV-tD~~~~~~~i~~~~~~-~g~   81 (246)
T COG4221           5 KGKVALITGASSGIGEATARALAEAGA-KVVLAARREERLEALADEIGAGAALALALDV-TDRAAVEAAIEALPEE-FGR   81 (246)
T ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCC-eEEEEeccHHHHHHHHHhhccCceEEEeecc-CCHHHHHHHHHHHHHh-hCc
Confidence            3578899998 9999999999999999 577777888877654 56773    122333 2234555555555432 347


Q ss_pred             ccEEEECCCC
Q 017916          255 IDVSFDCAGF  264 (364)
Q Consensus       255 ~d~vid~~g~  264 (364)
                      +|++++.+|-
T Consensus        82 iDiLvNNAGl   91 (246)
T COG4221          82 IDILVNNAGL   91 (246)
T ss_pred             ccEEEecCCC
Confidence            9999998873

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.77  E-value=0.038  Score=53.21  Aligned_cols=103  Identities=23%  Similarity=0.319  Sum_probs=61.8

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecCh--hH-HHHHHHcCCCeE-EecCCCcccHHHHHHHHHHHcCCCc
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDD--YR-LSVAKELGADNI-VKVSTNLQDIAEEVEKIQKAMGTGI  255 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~--~~-~~~~~~lg~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~  255 (364)
                      ++.++||+|+ |.+|...++.+...|++ +++++.+.  ++ .+..++++...+ .|..+ ..+..+.+..+.+ ..+++
T Consensus       209 ~g~~vlItGasggIG~~la~~l~~~Ga~-vi~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~-~~~~~~~~~~~~~-~~g~i  285 (450)
T PRK08261        209 AGKVALVTGAARGIGAAIAEVLARDGAH-VVCLDVPAAGEALAAVANRVGGTALALDITA-PDAPARIAEHLAE-RHGGL  285 (450)
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCE-EEEEeCCccHHHHHHHHHHcCCeEEEEeCCC-HHHHHHHHHHHHH-hCCCC
Confidence            5789999998 99999999999999994 66665532  22 233345564322 23221 1222222222222 23479


Q ss_pred             cEEEECCCC----------HHHHHHHHH-----------------hcccCCEEEEEcC
Q 017916          256 DVSFDCAGF----------NKTMSTALS-----------------ATRAGGKVCLVGM  286 (364)
Q Consensus       256 d~vid~~g~----------~~~~~~~~~-----------------~l~~~G~~v~~g~  286 (364)
                      |++|+++|.          .+.+...++                 .++++|+++.++.
T Consensus       286 d~vi~~AG~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~g~iv~~SS  343 (450)
T PRK08261        286 DIVVHNAGITRDKTLANMDEARWDSVLAVNLLAPLRITEALLAAGALGDGGRIVGVSS  343 (450)
T ss_pred             CEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhhcCCCEEEEECC
Confidence            999999883          233333333                 4556789998863

>PRK08017 oxidoreductase; Provisional

Probab=96.77  E-value=0.015  Score=51.19  Aligned_cols=79  Identities=20%  Similarity=0.312  Sum_probs=52.9

Q ss_pred             CEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeE-EecCCCcccHHHHHHHHHHHcCCCccEEEE
Q 017916          183 TNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNI-VKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  260 (364)
Q Consensus       183 ~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~d~vid  260 (364)
                      ++|||+|+ |.+|.+.++.+...|+ .++++.++.++.+.++++++..+ .|+. ...++.+.+.......++.+|.++.
T Consensus         3 k~vlVtGasg~IG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~D~~-~~~~~~~~~~~i~~~~~~~~~~ii~   80 (256)
T PRK08017          3 KSVLITGCSSGIGLEAALELKRRGY-RVLAACRKPDDVARMNSLGFTGILLDLD-DPESVERAADEVIALTDNRLYGLFN   80 (256)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHhHHHHhCCCeEEEeecC-CHHHHHHHHHHHHHhcCCCCeEEEE
Confidence            47999998 9999999999999999 57777788888777777775432 2221 1122333333332222457899888


Q ss_pred             CCC
Q 017916          261 CAG  263 (364)
Q Consensus       261 ~~g  263 (364)
                      +.|
T Consensus        81 ~ag   83 (256)
T PRK08017         81 NAG   83 (256)
T ss_pred             CCC
Confidence            876

>PRK11705 cyclopropane fatty acyl phospholipid synthase; Provisional

Probab=96.75  E-value=0.02  Score=53.77  Aligned_cols=99  Identities=21%  Similarity=0.269  Sum_probs=69.1

Q ss_pred             HHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcCCC
Q 017916          175 RRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTG  254 (364)
Q Consensus       175 ~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~  254 (364)
                      +..++++|++||..|+|. |..+..+++..|+ .|++++.+++..+.+++......+.+..  .++    +.+    .+.
T Consensus       161 ~~l~l~~g~rVLDIGcG~-G~~a~~la~~~g~-~V~giDlS~~~l~~A~~~~~~l~v~~~~--~D~----~~l----~~~  228 (383)
T PRK11705        161 RKLQLKPGMRVLDIGCGW-GGLARYAAEHYGV-SVVGVTISAEQQKLAQERCAGLPVEIRL--QDY----RDL----NGQ  228 (383)
T ss_pred             HHhCCCCCCEEEEeCCCc-cHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhccCeEEEEE--Cch----hhc----CCC
Confidence            667889999999999754 6778888988888 7899999999998887643211111111  121    111    356


Q ss_pred             ccEEEEC-----CCC---HHHHHHHHHhcccCCEEEEEc
Q 017916          255 IDVSFDC-----AGF---NKTMSTALSATRAGGKVCLVG  285 (364)
Q Consensus       255 ~d~vid~-----~g~---~~~~~~~~~~l~~~G~~v~~g  285 (364)
                      +|.|+..     +|.   ...++.+.+.|+|+|.++...
T Consensus       229 fD~Ivs~~~~ehvg~~~~~~~l~~i~r~LkpGG~lvl~~  267 (383)
T PRK11705        229 FDRIVSVGMFEHVGPKNYRTYFEVVRRCLKPDGLFLLHT  267 (383)
T ss_pred             CCEEEEeCchhhCChHHHHHHHHHHHHHcCCCcEEEEEE
Confidence            9988743     342   356788899999999998764

>PF02353 CMAS: Mycolic acid cyclopropane synthetase; InterPro: IPR003333 This entry represents mycolic acid cyclopropane synthases and related enzymes, including CmaA1, CmaA2 (cyclopropane mycolic acid synthase A1 and A2) and MmaA1-4 (methoxymycolic acid synthase A1-4)

Probab=96.74  E-value=0.0067  Score=54.01  Aligned_cols=99  Identities=21%  Similarity=0.379  Sum_probs=60.5

Q ss_pred             HHHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHH----HcCCCeEEecCCCcccHHHHHHHHHH
Q 017916          174 CRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAK----ELGADNIVKVSTNLQDIAEEVEKIQK  249 (364)
Q Consensus       174 l~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~----~lg~~~~~~~~~~~~~~~~~i~~~~~  249 (364)
                      ++++++++|++||-.|+|- |..++.+|+..|+ .|.+++.|++..++++    +.|....+.+..  .|+    +++  
T Consensus        55 ~~~~~l~~G~~vLDiGcGw-G~~~~~~a~~~g~-~v~gitlS~~Q~~~a~~~~~~~gl~~~v~v~~--~D~----~~~--  124 (273)
T PF02353_consen   55 CEKLGLKPGDRVLDIGCGW-GGLAIYAAERYGC-HVTGITLSEEQAEYARERIREAGLEDRVEVRL--QDY----RDL--  124 (273)
T ss_dssp             HTTTT--TT-EEEEES-TT-SHHHHHHHHHH---EEEEEES-HHHHHHHHHHHHCSTSSSTEEEEE--S-G----GG---
T ss_pred             HHHhCCCCCCEEEEeCCCc-cHHHHHHHHHcCc-EEEEEECCHHHHHHHHHHHHhcCCCCceEEEE--eec----ccc--
Confidence            3678999999999999763 6678889998899 6899989998877765    355432111100  121    112  


Q ss_pred             HcCCCccEEEE-----CCCC---HHHHHHHHHhcccCCEEEEE
Q 017916          250 AMGTGIDVSFD-----CAGF---NKTMSTALSATRAGGKVCLV  284 (364)
Q Consensus       250 ~~~~~~d~vid-----~~g~---~~~~~~~~~~l~~~G~~v~~  284 (364)
                        ..++|.|+.     .+|.   +..++.+.+.|+|+|+++.-
T Consensus       125 --~~~fD~IvSi~~~Ehvg~~~~~~~f~~~~~~LkpgG~~~lq  165 (273)
T PF02353_consen  125 --PGKFDRIVSIEMFEHVGRKNYPAFFRKISRLLKPGGRLVLQ  165 (273)
T ss_dssp             ----S-SEEEEESEGGGTCGGGHHHHHHHHHHHSETTEEEEEE
T ss_pred             --CCCCCEEEEEechhhcChhHHHHHHHHHHHhcCCCcEEEEE
Confidence              237898865     4542   35678899999999998754

All are thought to be S-adenosyl-L-methionine (SAM) utilising methyltransferases []. Mycolic acid cyclopropane synthase or cyclopropane-fatty-acyl-phospholipid synthase (CFA synthase) 2.1.1.79 from EC catalyses the reaction: S-adenosyl-L-methionine + phospholipid olefinic fatty acid -> S-adenosyl-L-homocysteine + phospholipid cyclopropane fatty acid. The major mycolic acid produced by Mycobacterium tuberculosis contains two cis-cyclopropanes in the meromycolate chain. Cyclopropanation may contribute to the structural integrity of the cell wall complex [].; GO: 0008610 lipid biosynthetic process; PDB: 3HA5_A 2FK8_A 3HA7_A 3HA3_A 2FK7_A 1KPG_D 1KP9_B 1KPH_D 3VC2_E 3VC1_D ....

>TIGR00438 rrmJ cell division protein FtsJ

Probab=96.74  E-value=0.032  Score=46.83  Aligned_cols=101  Identities=19%  Similarity=0.321  Sum_probs=60.4

Q ss_pred             cCCCCCCEEEEEcCCHHHHHHHHHHHHC-CCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcCCCc
Q 017916          177 ANIGPETNVLIMGAGPIGLVTMLGARAF-GAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGI  255 (364)
Q Consensus       177 ~~~~~g~~VLI~Gag~~G~~ai~la~~~-g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~  255 (364)
                      ..+++|++||..|+|.-+ .+..+++.. +...+++++.++.+    +..++. .+..+....+..+.++...  ...++
T Consensus        28 ~~i~~g~~VLDiG~GtG~-~~~~l~~~~~~~~~v~~vDis~~~----~~~~i~-~~~~d~~~~~~~~~l~~~~--~~~~~   99 (188)
T TIGR00438        28 KLIKPGDTVLDLGAAPGG-WSQVAVEQVGGKGRVIAVDLQPMK----PIENVD-FIRGDFTDEEVLNKIRERV--GDDKV   99 (188)
T ss_pred             cccCCCCEEEEecCCCCH-HHHHHHHHhCCCceEEEEeccccc----cCCCce-EEEeeCCChhHHHHHHHHh--CCCCc
Confidence            567899999999986633 444555543 44479999988754    112332 2222222222222232222  24579


Q ss_pred             cEEEE-CC----CC------------HHHHHHHHHhcccCCEEEEEc
Q 017916          256 DVSFD-CA----GF------------NKTMSTALSATRAGGKVCLVG  285 (364)
Q Consensus       256 d~vid-~~----g~------------~~~~~~~~~~l~~~G~~v~~g  285 (364)
                      |+|+. ..    |.            ...+..+.++|+++|+++...
T Consensus       100 D~V~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lvi~~  146 (188)
T TIGR00438       100 DVVMSDAAPNISGYWDIDHLRSIDLVELALDIAKEVLKPKGNFVVKV  146 (188)
T ss_pred             cEEEcCCCCCCCCCccccHHHHHHHHHHHHHHHHHHccCCCEEEEEE
Confidence            99995 21    21            356778899999999998753

>PRK13944 protein-L-isoaspartate O-methyltransferase; Provisional

Probab=96.73  E-value=0.055  Score=46.10  Aligned_cols=103  Identities=17%  Similarity=0.207  Sum_probs=67.2

Q ss_pred             HHHHcCCCCCCEEEEEcCCHHHHHHHHHHHHCC-CCEEEEEecChhHHHHHH----HcCCCe-EEecCCCcccHHHHHHH
Q 017916          173 ACRRANIGPETNVLIMGAGPIGLVTMLGARAFG-APRIVIVDVDDYRLSVAK----ELGADN-IVKVSTNLQDIAEEVEK  246 (364)
Q Consensus       173 ~l~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g-~~~vv~~~~~~~~~~~~~----~lg~~~-~~~~~~~~~~~~~~i~~  246 (364)
                      .++...++++++||-.|+|. |..+..+++..+ ...|++++.+++-.+.++    ..+... +.....   +..+.+  
T Consensus        64 ~~~~l~~~~~~~VLDiG~Gs-G~~~~~la~~~~~~g~V~~iD~~~~~~~~a~~~l~~~~~~~~v~~~~~---d~~~~~--  137 (205)
T PRK13944         64 MCELIEPRPGMKILEVGTGS-GYQAAVCAEAIERRGKVYTVEIVKELAIYAAQNIERLGYWGVVEVYHG---DGKRGL--  137 (205)
T ss_pred             HHHhcCCCCCCEEEEECcCc-cHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEC---CcccCC--
Confidence            34667788999999998765 777788888764 237999999887665544    345321 111111   111101  


Q ss_pred             HHHHcCCCccEEEECCCCHHHHHHHHHhcccCCEEEEE
Q 017916          247 IQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLV  284 (364)
Q Consensus       247 ~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~  284 (364)
                       .  ....+|.|+-+.........+++.|+++|+++..
T Consensus       138 -~--~~~~fD~Ii~~~~~~~~~~~l~~~L~~gG~lvi~  172 (205)
T PRK13944        138 -E--KHAPFDAIIVTAAASTIPSALVRQLKDGGVLVIP  172 (205)
T ss_pred             -c--cCCCccEEEEccCcchhhHHHHHhcCcCcEEEEE
Confidence             0  1257999987666556667888999999999764

>PRK14967 putative methyltransferase; Provisional

Probab=96.70  E-value=0.13  Score=44.38  Aligned_cols=99  Identities=26%  Similarity=0.325  Sum_probs=64.2

Q ss_pred             HHHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHH----cCCCeEEecCCCcccHHHHHHHHHH
Q 017916          174 CRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKE----LGADNIVKVSTNLQDIAEEVEKIQK  249 (364)
Q Consensus       174 l~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~i~~~~~  249 (364)
                      +....++++++||-.|+|. |..++.+++. ++..+++++.+++..+.+++    .+....+. .   .++.+.+     
T Consensus        29 l~~~~~~~~~~vLDlGcG~-G~~~~~la~~-~~~~v~~vD~s~~~l~~a~~n~~~~~~~~~~~-~---~d~~~~~-----   97 (223)
T PRK14967         29 LAAEGLGPGRRVLDLCTGS-GALAVAAAAA-GAGSVTAVDISRRAVRSARLNALLAGVDVDVR-R---GDWARAV-----   97 (223)
T ss_pred             HHhcccCCCCeEEEecCCH-HHHHHHHHHc-CCCeEEEEECCHHHHHHHHHHHHHhCCeeEEE-E---Cchhhhc-----
Confidence            3445678899999999876 8888888875 66579999999887765543    34321111 1   2222211     


Q ss_pred             HcCCCccEEEECCC---C------------------------HHHHHHHHHhcccCCEEEEE
Q 017916          250 AMGTGIDVSFDCAG---F------------------------NKTMSTALSATRAGGKVCLV  284 (364)
Q Consensus       250 ~~~~~~d~vid~~g---~------------------------~~~~~~~~~~l~~~G~~v~~  284 (364)
                       ....+|+|+....   .                        ...+..+.+.|+++|+++.+
T Consensus        98 -~~~~fD~Vi~npPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~Lk~gG~l~~~  158 (223)
T PRK14967         98 -EFRPFDVVVSNPPYVPAPPDAPPSRGPARAWDAGPDGRAVLDRLCDAAPALLAPGGSLLLV  158 (223)
T ss_pred             -cCCCeeEEEECCCCCCCCcccccccChhHhhhCCCcHHHHHHHHHHHHHHhcCCCcEEEEE
Confidence             1357999986421   0                        12445678899999999875

>PRK05693 short chain dehydrogenase; Provisional

Probab=96.70  E-value=0.017  Score=51.46  Aligned_cols=78  Identities=22%  Similarity=0.270  Sum_probs=52.2

Q ss_pred             CEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeE-EecCCCcccHHHHHHHHHHHcCCCccEEEE
Q 017916          183 TNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNI-VKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  260 (364)
Q Consensus       183 ~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~d~vid  260 (364)
                      .++||+|+ |.+|...++.+...|+ .|++++++.++.+.+...+...+ .|+. ..+++.+.+..+.+. .+++|++|+
T Consensus         2 k~vlItGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~Dl~-~~~~~~~~~~~~~~~-~~~id~vi~   78 (274)
T PRK05693          2 PVVLITGCSSGIGRALADAFKAAGY-EVWATARKAEDVEALAAAGFTAVQLDVN-DGAALARLAEELEAE-HGGLDVLIN   78 (274)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHCCCeEEEeeCC-CHHHHHHHHHHHHHh-cCCCCEEEE
Confidence            37899998 9999999999988999 57777777776665555554332 2332 223444444443322 357999999


Q ss_pred             CCC
Q 017916          261 CAG  263 (364)
Q Consensus       261 ~~g  263 (364)
                      ++|
T Consensus        79 ~ag   81 (274)
T PRK05693         79 NAG   81 (274)
T ss_pred             CCC
Confidence            988

>COG0421 SpeE Spermidine synthase [Amino acid transport and metabolism]

Probab=96.63  E-value=0.024  Score=50.56  Aligned_cols=105  Identities=17%  Similarity=0.203  Sum_probs=68.6

Q ss_pred             CCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHc-CCCeEEecCCCcccHHHHHHHHHHHcCCCcc
Q 017916          178 NIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKEL-GADNIVKVSTNLQDIAEEVEKIQKAMGTGID  256 (364)
Q Consensus       178 ~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~l-g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d  256 (364)
                      +..+ .+|||.|+|. |-++-.+++....+.++.++-+++=.+++++. +....-..+..-+=..+...++.+....++|
T Consensus        74 h~~p-k~VLiiGgGd-G~tlRevlkh~~ve~i~~VEID~~Vi~~ar~~l~~~~~~~~dpRv~i~i~Dg~~~v~~~~~~fD  151 (282)
T COG0421          74 HPNP-KRVLIIGGGD-GGTLREVLKHLPVERITMVEIDPAVIELARKYLPEPSGGADDPRVEIIIDDGVEFLRDCEEKFD  151 (282)
T ss_pred             CCCC-CeEEEECCCc-cHHHHHHHhcCCcceEEEEEcCHHHHHHHHHhccCcccccCCCceEEEeccHHHHHHhCCCcCC
Confidence            3344 5999998655 55677888888888999999999989988873 3221111111111111123344444455899


Q ss_pred             EEE-ECCCC---------HHHHHHHHHhcccCCEEEEE
Q 017916          257 VSF-DCAGF---------NKTMSTALSATRAGGKVCLV  284 (364)
Q Consensus       257 ~vi-d~~g~---------~~~~~~~~~~l~~~G~~v~~  284 (364)
                      +|| |+.-.         .+..+.+.++|+++|.++.-
T Consensus       152 vIi~D~tdp~gp~~~Lft~eFy~~~~~~L~~~Gi~v~q  189 (282)
T COG0421         152 VIIVDSTDPVGPAEALFTEEFYEGCRRALKEDGIFVAQ  189 (282)
T ss_pred             EEEEcCCCCCCcccccCCHHHHHHHHHhcCCCcEEEEe
Confidence            987 54332         57888999999999999876

>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=96.61  E-value=0.063  Score=47.66  Aligned_cols=104  Identities=21%  Similarity=0.280  Sum_probs=64.6

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHH----HHHcCCCe-EE--ecC-CCcccHHHHHHHHHHHc
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSV----AKELGADN-IV--KVS-TNLQDIAEEVEKIQKAM  251 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~----~~~lg~~~-~~--~~~-~~~~~~~~~i~~~~~~~  251 (364)
                      .|..|+|+|| +++|.+.+.-.-..|++.+.++ +..++.+.    +++++... ++  ..| ...++..+.+... ...
T Consensus        11 ~~kvVvITGASsGIG~~lA~~la~~G~~l~lva-r~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~~-~~~   88 (282)
T KOG1205|consen   11 AGKVVLITGASSGIGEALAYELAKRGAKLVLVA-RRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVEWA-IRH   88 (282)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHhCCCceEEee-hhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHHHH-HHh
Confidence            4688999999 9999988888888899654444 55555444    44445433 22  122 2234444444332 233


Q ss_pred             CCCccEEEECCCCH-------------------------HHHHHHHHhcccC--CEEEEEcC
Q 017916          252 GTGIDVSFDCAGFN-------------------------KTMSTALSATRAG--GKVCLVGM  286 (364)
Q Consensus       252 ~~~~d~vid~~g~~-------------------------~~~~~~~~~l~~~--G~~v~~g~  286 (364)
                      -+++|+.++.+|-.                         ...+.++..|++.  |+++..+.
T Consensus        89 fg~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvisS  150 (282)
T KOG1205|consen   89 FGRVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGHIVVISS  150 (282)
T ss_pred             cCCCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCeEEEEec
Confidence            56899999988732                         1334566666543  99998874

>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]

Probab=96.60  E-value=0.049  Score=45.67  Aligned_cols=82  Identities=16%  Similarity=0.222  Sum_probs=56.8

Q ss_pred             CCCEEEEEc-C-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHH-HcCCCeE-EecCCCcccHHHHHHHHHHHcCCCcc
Q 017916          181 PETNVLIMG-A-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAK-ELGADNI-VKVSTNLQDIAEEVEKIQKAMGTGID  256 (364)
Q Consensus       181 ~g~~VLI~G-a-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~-~lg~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~d  256 (364)
                      ....|||+| + |++|.+.+.-...-|+ .|+++.++-++...+. ++|.... +|. +.+++..+...+..+...++.|
T Consensus         6 ~~k~VlItgcs~GGIG~ala~ef~~~G~-~V~AtaR~~e~M~~L~~~~gl~~~kLDV-~~~~~V~~v~~evr~~~~Gkld   83 (289)
T KOG1209|consen    6 QPKKVLITGCSSGGIGYALAKEFARNGY-LVYATARRLEPMAQLAIQFGLKPYKLDV-SKPEEVVTVSGEVRANPDGKLD   83 (289)
T ss_pred             CCCeEEEeecCCcchhHHHHHHHHhCCe-EEEEEccccchHhhHHHhhCCeeEEecc-CChHHHHHHHHHHhhCCCCceE
Confidence            346789997 4 9999999888888999 7888888877766554 7775432 233 2334555444444443467899


Q ss_pred             EEEECCCC
Q 017916          257 VSFDCAGF  264 (364)
Q Consensus       257 ~vid~~g~  264 (364)
                      +.++.+|-
T Consensus        84 ~L~NNAG~   91 (289)
T KOG1209|consen   84 LLYNNAGQ   91 (289)
T ss_pred             EEEcCCCC
Confidence            99997763

>COG2230 Cfa Cyclopropane fatty acid synthase and related methyltransferases [Cell envelope biogenesis, outer membrane]

Probab=96.58  E-value=0.044  Score=48.56  Aligned_cols=101  Identities=21%  Similarity=0.357  Sum_probs=71.2

Q ss_pred             HHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHH----cCCC-eEEecCCCcccHHHHHHHHHH
Q 017916          175 RRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKE----LGAD-NIVKVSTNLQDIAEEVEKIQK  249 (364)
Q Consensus       175 ~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~----lg~~-~~~~~~~~~~~~~~~i~~~~~  249 (364)
                      +..++++|++||=.|.|- |.+++..|+.+|+ .|++++-|.+..+.+++    .|.. .+-..   ..|    .+.+  
T Consensus        66 ~kl~L~~G~~lLDiGCGW-G~l~~~aA~~y~v-~V~GvTlS~~Q~~~~~~r~~~~gl~~~v~v~---l~d----~rd~--  134 (283)
T COG2230          66 EKLGLKPGMTLLDIGCGW-GGLAIYAAEEYGV-TVVGVTLSEEQLAYAEKRIAARGLEDNVEVR---LQD----YRDF--  134 (283)
T ss_pred             HhcCCCCCCEEEEeCCCh-hHHHHHHHHHcCC-EEEEeeCCHHHHHHHHHHHHHcCCCcccEEE---ecc----cccc--
Confidence            779999999999999766 7788899999999 78999999987776654    5654 21110   011    1112  


Q ss_pred             HcCCCccEEEE-----CCCC---HHHHHHHHHhcccCCEEEEEcCCC
Q 017916          250 AMGTGIDVSFD-----CAGF---NKTMSTALSATRAGGKVCLVGMGH  288 (364)
Q Consensus       250 ~~~~~~d~vid-----~~g~---~~~~~~~~~~l~~~G~~v~~g~~~  288 (364)
                        .+.||-|+.     .+|.   ++.+..+.+.|+++|++.+.....
T Consensus       135 --~e~fDrIvSvgmfEhvg~~~~~~ff~~~~~~L~~~G~~llh~I~~  179 (283)
T COG2230         135 --EEPFDRIVSVGMFEHVGKENYDDFFKKVYALLKPGGRMLLHSITG  179 (283)
T ss_pred             --ccccceeeehhhHHHhCcccHHHHHHHHHhhcCCCceEEEEEecC
Confidence              234777753     4553   467788999999999999876433

>PRK06182 short chain dehydrogenase; Validated

Probab=96.55  E-value=0.03  Score=49.89  Aligned_cols=81  Identities=23%  Similarity=0.275  Sum_probs=53.6

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeE-EecCCCcccHHHHHHHHHHHcCCCccEE
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNI-VKVSTNLQDIAEEVEKIQKAMGTGIDVS  258 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~d~v  258 (364)
                      ++.+++|+|+ |.+|...++.+...|+ .|++++++.++.+.+...+...+ .|.. ..+++.+.++.+.+. .+++|++
T Consensus         2 ~~k~vlItGasggiG~~la~~l~~~G~-~V~~~~r~~~~l~~~~~~~~~~~~~Dv~-~~~~~~~~~~~~~~~-~~~id~l   78 (273)
T PRK06182          2 QKKVALVTGASSGIGKATARRLAAQGY-TVYGAARRVDKMEDLASLGVHPLSLDVT-DEASIKAAVDTIIAE-EGRIDVL   78 (273)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhCCCeEEEeeCC-CHHHHHHHHHHHHHh-cCCCCEE
Confidence            3578999998 9999999999988999 56777777766654444444322 2322 223444444444332 3579999


Q ss_pred             EECCCC
Q 017916          259 FDCAGF  264 (364)
Q Consensus       259 id~~g~  264 (364)
                      |+++|.
T Consensus        79 i~~ag~   84 (273)
T PRK06182         79 VNNAGY   84 (273)
T ss_pred             EECCCc
Confidence            999873

>PRK06139 short chain dehydrogenase; Provisional

Probab=96.49  E-value=0.033  Score=51.24  Aligned_cols=82  Identities=26%  Similarity=0.347  Sum_probs=51.8

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHH----HHHcCCCe-EEecCCC-cccHHHHHHHHHHHcCC
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSV----AKELGADN-IVKVSTN-LQDIAEEVEKIQKAMGT  253 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~----~~~lg~~~-~~~~~~~-~~~~~~~i~~~~~~~~~  253 (364)
                      .+.+|||+|+ +++|.+.++.+...|++ |+.+++++++.+.    +++.|... ++..|-. .++..+.+..+.+ ..+
T Consensus         6 ~~k~vlITGAs~GIG~aia~~la~~G~~-Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~-~~g   83 (330)
T PRK06139          6 HGAVVVITGASSGIGQATAEAFARRGAR-LVLAARDEEALQAVAEECRALGAEVLVVPTDVTDADQVKALATQAAS-FGG   83 (330)
T ss_pred             CCCEEEEcCCCCHHHHHHHHHHHHCCCE-EEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHH-hcC
Confidence            4679999998 99999999999999994 6677777766543    23345432 2222211 2233333333322 235


Q ss_pred             CccEEEECCCC
Q 017916          254 GIDVSFDCAGF  264 (364)
Q Consensus       254 ~~d~vid~~g~  264 (364)
                      ++|++|+++|.
T Consensus        84 ~iD~lVnnAG~   94 (330)
T PRK06139         84 RIDVWVNNVGV   94 (330)
T ss_pred             CCCEEEECCCc
Confidence            79999999873

>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B

Probab=96.48  E-value=0.055  Score=44.91  Aligned_cols=90  Identities=19%  Similarity=0.281  Sum_probs=60.2

Q ss_pred             EEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcCCCccEEEECCC
Q 017916          185 VLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAG  263 (364)
Q Consensus       185 VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid~~g  263 (364)
                      |+|.|+ |.+|...++.+...|. .|.++.+++++.+.  ..++. ++..+-  .+. +.+++..    .++|.||+++|
T Consensus         1 I~V~GatG~vG~~l~~~L~~~~~-~V~~~~R~~~~~~~--~~~~~-~~~~d~--~d~-~~~~~al----~~~d~vi~~~~   69 (183)
T PF13460_consen    1 ILVFGATGFVGRALAKQLLRRGH-EVTALVRSPSKAED--SPGVE-IIQGDL--FDP-DSVKAAL----KGADAVIHAAG   69 (183)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTS-EEEEEESSGGGHHH--CTTEE-EEESCT--TCH-HHHHHHH----TTSSEEEECCH
T ss_pred             eEEECCCChHHHHHHHHHHHCCC-EEEEEecCchhccc--ccccc-cceeee--hhh-hhhhhhh----hhcchhhhhhh
Confidence            789998 9999999999999997 67777788887766  33333 233222  222 2233322    37999999998


Q ss_pred             C----HHHHHHHHHhcccCC--EEEEEc
Q 017916          264 F----NKTMSTALSATRAGG--KVCLVG  285 (364)
Q Consensus       264 ~----~~~~~~~~~~l~~~G--~~v~~g  285 (364)
                      .    .+....+++.++..|  +++.++
T Consensus        70 ~~~~~~~~~~~~~~a~~~~~~~~~v~~s   97 (183)
T PF13460_consen   70 PPPKDVDAAKNIIEAAKKAGVKRVVYLS   97 (183)
T ss_dssp             STTTHHHHHHHHHHHHHHTTSSEEEEEE
T ss_pred             hhcccccccccccccccccccccceeee
Confidence            4    344556666665543  677665

...

>PRK06057 short chain dehydrogenase; Provisional

Probab=96.46  E-value=0.037  Score=48.75  Aligned_cols=81  Identities=25%  Similarity=0.331  Sum_probs=51.0

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHH-HHHcCCCeEEecCCC-cccHHHHHHHHHHHcCCCccE
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSV-AKELGADNIVKVSTN-LQDIAEEVEKIQKAMGTGIDV  257 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~-~~~lg~~~~~~~~~~-~~~~~~~i~~~~~~~~~~~d~  257 (364)
                      .|.+|||+|+ |.+|.+.++.+...|+ .|+.+++++.+.+. ..+++.. .+..+-. .+++.+.+..+... .+++|+
T Consensus         6 ~~~~vlItGasggIG~~~a~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~~-~~~id~   82 (255)
T PRK06057          6 AGRVAVITGGGSGIGLATARRLAAEGA-TVVVGDIDPEAGKAAADEVGGL-FVPTDVTDEDAVNALFDTAAET-YGSVDI   82 (255)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHcCCc-EEEeeCCCHHHHHHHHHHHHHH-cCCCCE
Confidence            4789999998 9999999999999999 56666666655443 3445442 2222221 22333333333222 247999


Q ss_pred             EEECCCC
Q 017916          258 SFDCAGF  264 (364)
Q Consensus       258 vid~~g~  264 (364)
                      +|.++|.
T Consensus        83 vi~~ag~   89 (255)
T PRK06057         83 AFNNAGI   89 (255)
T ss_pred             EEECCCc
Confidence            9998873

>COG2519 GCD14 tRNA(1-methyladenosine) methyltransferase and related methyltransferases [Translation, ribosomal structure and biogenesis]

Probab=96.46  E-value=0.056  Score=46.72  Aligned_cols=104  Identities=26%  Similarity=0.379  Sum_probs=72.4

Q ss_pred             HHHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCC-CEEEEEecChhHHHHH----HHcCCCeEEecCCCcccHHHHHHHHH
Q 017916          174 CRRANIGPETNVLIMGAGPIGLVTMLGARAFGA-PRIVIVDVDDYRLSVA----KELGADNIVKVSTNLQDIAEEVEKIQ  248 (364)
Q Consensus       174 l~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~-~~vv~~~~~~~~~~~~----~~lg~~~~~~~~~~~~~~~~~i~~~~  248 (364)
                      +...++.+|++|+-.|.|+ |.+++-||++.|. ..|++.+...+..+.+    +.+|....+.+.  ..|..+.+    
T Consensus        87 ~~~~gi~pg~rVlEAGtGS-G~lt~~La~~vg~~G~v~tyE~r~d~~k~A~~Nl~~~~l~d~v~~~--~~Dv~~~~----  159 (256)
T COG2519          87 VARLGISPGSRVLEAGTGS-GALTAYLARAVGPEGHVTTYEIREDFAKTARENLSEFGLGDRVTLK--LGDVREGI----  159 (256)
T ss_pred             HHHcCCCCCCEEEEcccCc-hHHHHHHHHhhCCCceEEEEEecHHHHHHHHHHHHHhccccceEEE--eccccccc----
Confidence            3668899999999988765 7888999998876 4788888877665554    345554422211  12222211    


Q ss_pred             HHcCCCccEEE-ECCCCHHHHHHHHHhcccCCEEEEEcC
Q 017916          249 KAMGTGIDVSF-DCAGFNKTMSTALSATRAGGKVCLVGM  286 (364)
Q Consensus       249 ~~~~~~~d~vi-d~~g~~~~~~~~~~~l~~~G~~v~~g~  286 (364)
                        .+..+|.+| |--...+.++.+.+.|+++|.++.+..
T Consensus       160 --~~~~vDav~LDmp~PW~~le~~~~~Lkpgg~~~~y~P  196 (256)
T COG2519         160 --DEEDVDAVFLDLPDPWNVLEHVSDALKPGGVVVVYSP  196 (256)
T ss_pred             --cccccCEEEEcCCChHHHHHHHHHHhCCCcEEEEEcC
Confidence              134788875 665556888999999999999999854

>PRK00107 gidB 16S rRNA methyltransferase GidB; Reviewed

Probab=96.38  E-value=0.048  Score=45.69  Aligned_cols=96  Identities=21%  Similarity=0.280  Sum_probs=62.5

Q ss_pred             CCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHH----HcCCCeEEecCCCcccHHHHHHHHHHHcCCC
Q 017916          179 IGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAK----ELGADNIVKVSTNLQDIAEEVEKIQKAMGTG  254 (364)
Q Consensus       179 ~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~----~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~  254 (364)
                      ++++.+||-.|+|. |..++.+++......|++++.+++..+.++    +.+.+.+.....   +..    ++..  ...
T Consensus        43 l~~g~~VLDiGcGt-G~~al~la~~~~~~~V~giD~s~~~l~~A~~~~~~~~l~~i~~~~~---d~~----~~~~--~~~  112 (187)
T PRK00107         43 LPGGERVLDVGSGA-GFPGIPLAIARPELKVTLVDSLGKKIAFLREVAAELGLKNVTVVHG---RAE----EFGQ--EEK  112 (187)
T ss_pred             cCCCCeEEEEcCCC-CHHHHHHHHHCCCCeEEEEeCcHHHHHHHHHHHHHcCCCCEEEEec---cHh----hCCC--CCC
Confidence            45689999998754 566667776554448999999987766554    355543221111   211    1111  357


Q ss_pred             ccEEEECCC--CHHHHHHHHHhcccCCEEEEE
Q 017916          255 IDVSFDCAG--FNKTMSTALSATRAGGKVCLV  284 (364)
Q Consensus       255 ~d~vid~~g--~~~~~~~~~~~l~~~G~~v~~  284 (364)
                      +|+|+....  -.+.+..+.+.|+++|+++.+
T Consensus       113 fDlV~~~~~~~~~~~l~~~~~~LkpGG~lv~~  144 (187)
T PRK00107        113 FDVVTSRAVASLSDLVELCLPLLKPGGRFLAL  144 (187)
T ss_pred             ccEEEEccccCHHHHHHHHHHhcCCCeEEEEE
Confidence            999986432  146777899999999999977

>PRK07402 precorrin-6B methylase; Provisional

Probab=96.38  E-value=0.089  Score=44.41  Aligned_cols=104  Identities=13%  Similarity=0.295  Sum_probs=63.5

Q ss_pred             HHHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHH----cCCCeEEecCCCcccHHHHHHHHHH
Q 017916          174 CRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKE----LGADNIVKVSTNLQDIAEEVEKIQK  249 (364)
Q Consensus       174 l~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~i~~~~~  249 (364)
                      +....++++++||=.|+|. |..++.+++......+++++.+++..+.+++    ++...+....   .+..+.+..+  
T Consensus        33 ~~~l~~~~~~~VLDiG~G~-G~~~~~la~~~~~~~V~~vD~s~~~~~~a~~n~~~~~~~~v~~~~---~d~~~~~~~~--  106 (196)
T PRK07402         33 ISQLRLEPDSVLWDIGAGT-GTIPVEAGLLCPKGRVIAIERDEEVVNLIRRNCDRFGVKNVEVIE---GSAPECLAQL--  106 (196)
T ss_pred             HHhcCCCCCCEEEEeCCCC-CHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCCeEEEE---CchHHHHhhC--
Confidence            3556778899998887644 5556666766544479999999887766543    5554322211   1222212111  


Q ss_pred             HcCCCccE-EEECCCC-HHHHHHHHHhcccCCEEEEEc
Q 017916          250 AMGTGIDV-SFDCAGF-NKTMSTALSATRAGGKVCLVG  285 (364)
Q Consensus       250 ~~~~~~d~-vid~~g~-~~~~~~~~~~l~~~G~~v~~g  285 (364)
                        ...+|. .++.... .+.+..+.+.|+++|+++...
T Consensus       107 --~~~~d~v~~~~~~~~~~~l~~~~~~LkpgG~li~~~  142 (196)
T PRK07402        107 --APAPDRVCIEGGRPIKEILQAVWQYLKPGGRLVATA  142 (196)
T ss_pred             --CCCCCEEEEECCcCHHHHHHHHHHhcCCCeEEEEEe
Confidence              122344 4443322 467888999999999998774

>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related

Probab=96.35  E-value=0.03  Score=46.53  Aligned_cols=90  Identities=21%  Similarity=0.221  Sum_probs=60.5

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcCCCccEEE
Q 017916          180 GPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF  259 (364)
Q Consensus       180 ~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vi  259 (364)
                      -.|.+|.|+|.|.+|+..++.++.+|+ .|++.+++..........+...        .++.+    +.    ...|+|+
T Consensus        34 l~g~tvgIiG~G~IG~~vA~~l~~fG~-~V~~~d~~~~~~~~~~~~~~~~--------~~l~e----ll----~~aDiv~   96 (178)
T PF02826_consen   34 LRGKTVGIIGYGRIGRAVARRLKAFGM-RVIGYDRSPKPEEGADEFGVEY--------VSLDE----LL----AQADIVS   96 (178)
T ss_dssp             STTSEEEEESTSHHHHHHHHHHHHTT--EEEEEESSCHHHHHHHHTTEEE--------SSHHH----HH----HH-SEEE
T ss_pred             cCCCEEEEEEEcCCcCeEeeeeecCCc-eeEEecccCChhhhccccccee--------eehhh----hc----chhhhhh
Confidence            368999999999999999999999999 7888888777665445555421        12222    22    2468888


Q ss_pred             ECCCCHH-----HHHHHHHhcccCCEEEEEcC
Q 017916          260 DCAGFNK-----TMSTALSATRAGGKVCLVGM  286 (364)
Q Consensus       260 d~~g~~~-----~~~~~~~~l~~~G~~v~~g~  286 (364)
                      .+....+     .-...+..|+++..++.++.
T Consensus        97 ~~~plt~~T~~li~~~~l~~mk~ga~lvN~aR  128 (178)
T PF02826_consen   97 LHLPLTPETRGLINAEFLAKMKPGAVLVNVAR  128 (178)
T ss_dssp             E-SSSSTTTTTSBSHHHHHTSTTTEEEEESSS
T ss_pred             hhhccccccceeeeeeeeeccccceEEEeccc
Confidence            7665211     11356788898888887753

All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....

>PRK06949 short chain dehydrogenase; Provisional

Probab=96.33  E-value=0.049  Score=47.90  Aligned_cols=82  Identities=22%  Similarity=0.299  Sum_probs=52.2

Q ss_pred             CCCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHH-HHc---CC-CeEEecCC-CcccHHHHHHHHHHHcC
Q 017916          180 GPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KEL---GA-DNIVKVST-NLQDIAEEVEKIQKAMG  252 (364)
Q Consensus       180 ~~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~-~~l---g~-~~~~~~~~-~~~~~~~~i~~~~~~~~  252 (364)
                      ..+.+|||+|+ |.+|..++..+...|+ .|+.+.++.++.+.+ ..+   +. ...+..+- ..+++.+.++...+. .
T Consensus         7 ~~~k~ilItGasg~IG~~~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~   84 (258)
T PRK06949          7 LEGKVALVTGASSGLGARFAQVLAQAGA-KVVLASRRVERLKELRAEIEAEGGAAHVVSLDVTDYQSIKAAVAHAETE-A   84 (258)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHh-c
Confidence            45789999998 9999999999999999 577777777665433 222   21 12222222 223444444443322 3


Q ss_pred             CCccEEEECCC
Q 017916          253 TGIDVSFDCAG  263 (364)
Q Consensus       253 ~~~d~vid~~g  263 (364)
                      +++|++|++.|
T Consensus        85 ~~~d~li~~ag   95 (258)
T PRK06949         85 GTIDILVNNSG   95 (258)
T ss_pred             CCCCEEEECCC
Confidence            57999999988

>PRK12939 short chain dehydrogenase; Provisional

Probab=96.30  E-value=0.12  Score=45.02  Aligned_cols=82  Identities=16%  Similarity=0.139  Sum_probs=49.2

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHH-HH---cCCC-eEEecCCCc-ccHHHHHHHHHHHcCC
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KE---LGAD-NIVKVSTNL-QDIAEEVEKIQKAMGT  253 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~-~~---lg~~-~~~~~~~~~-~~~~~~i~~~~~~~~~  253 (364)
                      ++.++||+|+ |.+|...+..+...|+ .++.+++++++.... ++   .+.. ..+..+-.+ +++.+.+..+... -+
T Consensus         6 ~~~~vlItGa~g~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-~~   83 (250)
T PRK12939          6 AGKRALVTGAARGLGAAFAEALAEAGA-TVAFNDGLAAEARELAAALEAAGGRAHAIAADLADPASVQRFFDAAAAA-LG   83 (250)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH-cC
Confidence            4689999998 9999999999988999 466666666544322 22   2322 122222221 2222222222221 25


Q ss_pred             CccEEEECCCC
Q 017916          254 GIDVSFDCAGF  264 (364)
Q Consensus       254 ~~d~vid~~g~  264 (364)
                      ++|++|.++|.
T Consensus        84 ~id~vi~~ag~   94 (250)
T PRK12939         84 GLDGLVNNAGI   94 (250)
T ss_pred             CCCEEEECCCC
Confidence            79999999874

>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.29  E-value=0.042  Score=48.36  Aligned_cols=82  Identities=22%  Similarity=0.222  Sum_probs=49.1

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCC-CcccHHHHHHHHHHHcCCCccEE
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVST-NLQDIAEEVEKIQKAMGTGIDVS  258 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~-~~~~~~~~i~~~~~~~~~~~d~v  258 (364)
                      .+.++||+|+ |.+|.+.++.+...|+++++....+++..+.++..+.. .+..+- ..++..+.++.+... -+++|++
T Consensus         6 ~~k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~~~~-~~~~Dl~~~~~~~~~~~~~~~~-~~~id~l   83 (255)
T PRK06463          6 KGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAENEAKELREKGVF-TIKCDVGNRDQVKKSKEVVEKE-FGRVDVL   83 (255)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHhCCCe-EEEecCCCHHHHHHHHHHHHHH-cCCCCEE
Confidence            4678999998 99999999999889995444333344444444433432 222221 223344444443332 2479999


Q ss_pred             EECCCC
Q 017916          259 FDCAGF  264 (364)
Q Consensus       259 id~~g~  264 (364)
                      |.++|.
T Consensus        84 i~~ag~   89 (255)
T PRK06463         84 VNNAGI   89 (255)
T ss_pred             EECCCc
Confidence            998874

>PLN02823 spermine synthase

Probab=96.27  E-value=0.051  Score=49.88  Aligned_cols=98  Identities=18%  Similarity=0.235  Sum_probs=62.3

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcC-CCeEEecCCC-----cccHHHHHHHHHHHcCCC
Q 017916          181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELG-ADNIVKVSTN-----LQDIAEEVEKIQKAMGTG  254 (364)
Q Consensus       181 ~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg-~~~~~~~~~~-----~~~~~~~i~~~~~~~~~~  254 (364)
                      ...+|||.|+|. |..+..+++..+.+.+.+++.+++-.+++++.- .... .++..     ..|-.+.+    ....+.
T Consensus       103 ~pk~VLiiGgG~-G~~~re~l~~~~~~~v~~VEiD~~vv~lar~~~~~~~~-~~~dprv~v~~~Da~~~L----~~~~~~  176 (336)
T PLN02823        103 NPKTVFIMGGGE-GSTAREVLRHKTVEKVVMCDIDQEVVDFCRKHLTVNRE-AFCDKRLELIINDARAEL----EKRDEK  176 (336)
T ss_pred             CCCEEEEECCCc-hHHHHHHHhCCCCCeEEEEECCHHHHHHHHHhcccccc-cccCCceEEEEChhHHHH----hhCCCC
Confidence            457899998764 566677778777778999999999999888742 1100 00000     12222222    223568


Q ss_pred             ccEEE-ECCC-----------CHHHHH-HHHHhcccCCEEEEE
Q 017916          255 IDVSF-DCAG-----------FNKTMS-TALSATRAGGKVCLV  284 (364)
Q Consensus       255 ~d~vi-d~~g-----------~~~~~~-~~~~~l~~~G~~v~~  284 (364)
                      +|+|| |...           +.+.++ .+.+.|+++|.++.-
T Consensus       177 yDvIi~D~~dp~~~~~~~~Lyt~eF~~~~~~~~L~p~Gvlv~q  219 (336)
T PLN02823        177 FDVIIGDLADPVEGGPCYQLYTKSFYERIVKPKLNPGGIFVTQ  219 (336)
T ss_pred             ccEEEecCCCccccCcchhhccHHHHHHHHHHhcCCCcEEEEe
Confidence            99987 4321           224565 788899999998754

>PRK07060 short chain dehydrogenase; Provisional

Probab=96.26  E-value=0.049  Score=47.49  Aligned_cols=78  Identities=23%  Similarity=0.341  Sum_probs=51.0

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHH-HHcCCCeEEecCCCcccHHHHHHHHHHHcCCCccEE
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVS  258 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~-~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~v  258 (364)
                      ++.+++|+|+ |.+|...++.+...|+ .|+.++++.++.+.+ +.++.. .+..+-.+.   +.+...... .+++|++
T Consensus         8 ~~~~~lItGa~g~iG~~~a~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~-~~~~D~~~~---~~v~~~~~~-~~~~d~v   81 (245)
T PRK07060          8 SGKSVLVTGASSGIGRACAVALAQRGA-RVVAAARNAAALDRLAGETGCE-PLRLDVGDD---AAIRAALAA-AGAFDGL   81 (245)
T ss_pred             CCCEEEEeCCcchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCe-EEEecCCCH---HHHHHHHHH-hCCCCEE
Confidence            5679999998 9999999999999999 577777777665443 444543 222222211   123333322 3479999


Q ss_pred             EECCCC
Q 017916          259 FDCAGF  264 (364)
Q Consensus       259 id~~g~  264 (364)
                      |++.|.
T Consensus        82 i~~ag~   87 (245)
T PRK07060         82 VNCAGI   87 (245)
T ss_pred             EECCCC
Confidence            998873

>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]

Probab=96.25  E-value=0.056  Score=50.23  Aligned_cols=96  Identities=17%  Similarity=0.239  Sum_probs=64.1

Q ss_pred             CEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcC---CCeEEecCCCcccHHHHHHHHHHHcCCCccEEE
Q 017916          183 TNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELG---ADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF  259 (364)
Q Consensus       183 ~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg---~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vi  259 (364)
                      .+|||.|+|.+|+.+++.+.+.+...|.+.+++.++.+.+....   .. .+.++-.  +.. .+.++.    .+.|+||
T Consensus         2 ~~ilviGaG~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~~~~v~-~~~vD~~--d~~-al~~li----~~~d~VI   73 (389)
T COG1748           2 MKILVIGAGGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELIGGKVE-ALQVDAA--DVD-ALVALI----KDFDLVI   73 (389)
T ss_pred             CcEEEECCchhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhccccce-eEEeccc--ChH-HHHHHH----hcCCEEE
Confidence            47899999999999999998888557888889988888776653   22 2222221  222 232332    3569999


Q ss_pred             ECCCCHHHHHHHHHhcccCCEEEEEcC
Q 017916          260 DCAGFNKTMSTALSATRAGGKVCLVGM  286 (364)
Q Consensus       260 d~~g~~~~~~~~~~~l~~~G~~v~~g~  286 (364)
                      +|....-....+-.|++.+=.+++...
T Consensus        74 n~~p~~~~~~i~ka~i~~gv~yvDts~  100 (389)
T COG1748          74 NAAPPFVDLTILKACIKTGVDYVDTSY  100 (389)
T ss_pred             EeCCchhhHHHHHHHHHhCCCEEEccc
Confidence            999855554444456666656666653

>PRK04457 spermidine synthase; Provisional

Probab=96.24  E-value=0.12  Score=45.80  Aligned_cols=96  Identities=17%  Similarity=0.176  Sum_probs=65.9

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHc-CC----CeEEecCCCcccHHHHHHHHHHHcCCC
Q 017916          180 GPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKEL-GA----DNIVKVSTNLQDIAEEVEKIQKAMGTG  254 (364)
Q Consensus       180 ~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~l-g~----~~~~~~~~~~~~~~~~i~~~~~~~~~~  254 (364)
                      .++.+||+.|.|. |..+..+++......+.+++.+++-.+.+++. +.    ..+...   ..|..+.++.    ....
T Consensus        65 ~~~~~vL~IG~G~-G~l~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~rv~v~---~~Da~~~l~~----~~~~  136 (262)
T PRK04457         65 PRPQHILQIGLGG-GSLAKFIYTYLPDTRQTAVEINPQVIAVARNHFELPENGERFEVI---EADGAEYIAV----HRHS  136 (262)
T ss_pred             CCCCEEEEECCCH-hHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHcCCCCCCCceEEE---ECCHHHHHHh----CCCC
Confidence            4567899999865 77888888887655799999999988888763 32    111111   1333333332    2457


Q ss_pred             ccEEE-ECCC---------CHHHHHHHHHhcccCCEEEE
Q 017916          255 IDVSF-DCAG---------FNKTMSTALSATRAGGKVCL  283 (364)
Q Consensus       255 ~d~vi-d~~g---------~~~~~~~~~~~l~~~G~~v~  283 (364)
                      +|+|+ |+..         ..+.++.+.++|+++|.++.
T Consensus       137 yD~I~~D~~~~~~~~~~l~t~efl~~~~~~L~pgGvlvi  175 (262)
T PRK04457        137 TDVILVDGFDGEGIIDALCTQPFFDDCRNALSSDGIFVV  175 (262)
T ss_pred             CCEEEEeCCCCCCCccccCcHHHHHHHHHhcCCCcEEEE
Confidence            99986 4432         14788899999999999986

>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional

Probab=96.23  E-value=0.088  Score=51.52  Aligned_cols=45  Identities=20%  Similarity=0.224  Sum_probs=36.2

Q ss_pred             HHcCCCCCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHH
Q 017916          175 RRANIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLS  220 (364)
Q Consensus       175 ~~~~~~~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~  220 (364)
                      ...+.+.|.+|||+|+ |.+|..+++.+...|+ .|+++.++.++..
T Consensus        73 ~~~~~~~gKvVLVTGATGgIG~aLAr~LLk~G~-~Vval~Rn~ekl~  118 (576)
T PLN03209         73 KELDTKDEDLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSAQRAE  118 (576)
T ss_pred             cccccCCCCEEEEECCCCHHHHHHHHHHHHCCC-eEEEEeCCHHHHH
Confidence            3466788999999998 9999999999988999 4666667766654

>COG0686 Ald Alanine dehydrogenase [Amino acid transport and metabolism]

Probab=96.23  E-value=0.022  Score=50.50  Aligned_cols=96  Identities=19%  Similarity=0.288  Sum_probs=69.6

Q ss_pred             CCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcCCCccEEEEC
Q 017916          182 ETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDC  261 (364)
Q Consensus       182 g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid~  261 (364)
                      ..+|.|.|+|.+|.-++.+|.-+|+ .|...+.+..|...++.+....+..+.++..++.+.+        .+.|++|.+
T Consensus       168 ~~kv~iiGGGvvgtnaAkiA~glgA-~Vtild~n~~rl~~ldd~f~~rv~~~~st~~~iee~v--------~~aDlvIga  238 (371)
T COG0686         168 PAKVVVLGGGVVGTNAAKIAIGLGA-DVTILDLNIDRLRQLDDLFGGRVHTLYSTPSNIEEAV--------KKADLVIGA  238 (371)
T ss_pred             CccEEEECCccccchHHHHHhccCC-eeEEEecCHHHHhhhhHhhCceeEEEEcCHHHHHHHh--------hhccEEEEE
Confidence            4567777999999999999999999 5788889999999888755444333323333333332        468999886


Q ss_pred             CCC------HHHHHHHHHhcccCCEEEEEcC
Q 017916          262 AGF------NKTMSTALSATRAGGKVCLVGM  286 (364)
Q Consensus       262 ~g~------~~~~~~~~~~l~~~G~~v~~g~  286 (364)
                      +=.      .-..+++++.|+||+.++++..
T Consensus       239 VLIpgakaPkLvt~e~vk~MkpGsVivDVAi  269 (371)
T COG0686         239 VLIPGAKAPKLVTREMVKQMKPGSVIVDVAI  269 (371)
T ss_pred             EEecCCCCceehhHHHHHhcCCCcEEEEEEE
Confidence            421      2355688999999999998863

>PRK07814 short chain dehydrogenase; Provisional

Probab=96.23  E-value=0.059  Score=47.73  Aligned_cols=81  Identities=17%  Similarity=0.266  Sum_probs=50.0

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHH-HHc---CCC-eEEecCCCc-ccHHHHHHHHHHHcCC
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KEL---GAD-NIVKVSTNL-QDIAEEVEKIQKAMGT  253 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~-~~l---g~~-~~~~~~~~~-~~~~~~i~~~~~~~~~  253 (364)
                      ++.++||+|+ |.+|.+.++.+...|+ .|+.++++.++.+.+ +.+   +.. .++..+-.+ +++.+.+....+. -+
T Consensus         9 ~~~~vlItGasggIG~~~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~   86 (263)
T PRK07814          9 DDQVAVVTGAGRGLGAAIALAFAEAGA-DVLIAARTESQLDEVAEQIRAAGRRAHVVAADLAHPEATAGLAGQAVEA-FG   86 (263)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH-cC
Confidence            5789999998 9999999999988999 567777776654332 222   322 222222222 2222233333222 24


Q ss_pred             CccEEEECCC
Q 017916          254 GIDVSFDCAG  263 (364)
Q Consensus       254 ~~d~vid~~g  263 (364)
                      ++|++|+++|
T Consensus        87 ~id~vi~~Ag   96 (263)
T PRK07814         87 RLDIVVNNVG   96 (263)
T ss_pred             CCCEEEECCC
Confidence            7999999887

>PRK00536 speE spermidine synthase; Provisional

Probab=96.21  E-value=0.021  Score=50.29  Aligned_cols=99  Identities=10%  Similarity=-0.100  Sum_probs=66.3

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHH-cCCCeEEecCCCcccHHHHHHHHHHHcCCCccEE
Q 017916          180 GPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKE-LGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVS  258 (364)
Q Consensus       180 ~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~-lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~v  258 (364)
                      ....+|||.|+|. |.++-.++|.-.  .|..++-+++-.+++++ |..-.. .+++.+-.+...+   .+...+.+|+|
T Consensus        71 ~~pk~VLIiGGGD-Gg~~REvLkh~~--~v~mVeID~~Vv~~~k~~lP~~~~-~~~DpRv~l~~~~---~~~~~~~fDVI  143 (262)
T PRK00536         71 KELKEVLIVDGFD-LELAHQLFKYDT--HVDFVQADEKILDSFISFFPHFHE-VKNNKNFTHAKQL---LDLDIKKYDLI  143 (262)
T ss_pred             CCCCeEEEEcCCc-hHHHHHHHCcCC--eeEEEECCHHHHHHHHHHCHHHHH-hhcCCCEEEeehh---hhccCCcCCEE
Confidence            4568999998766 567778888753  78888888888888887 331110 1222222222112   12123679997


Q ss_pred             E-ECCCCHHHHHHHHHhcccCCEEEEEc
Q 017916          259 F-DCAGFNKTMSTALSATRAGGKVCLVG  285 (364)
Q Consensus       259 i-d~~g~~~~~~~~~~~l~~~G~~v~~g  285 (364)
                      | |+.-+++....+.++|+++|.++.-+
T Consensus       144 IvDs~~~~~fy~~~~~~L~~~Gi~v~Qs  171 (262)
T PRK00536        144 ICLQEPDIHKIDGLKRMLKEDGVFISVA  171 (262)
T ss_pred             EEcCCCChHHHHHHHHhcCCCcEEEECC
Confidence            6 76666788889999999999998764

>PRK08265 short chain dehydrogenase; Provisional

Probab=96.21  E-value=0.11  Score=45.83  Aligned_cols=82  Identities=23%  Similarity=0.277  Sum_probs=51.9

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHH-HHHHcCCC-eEEecCC-CcccHHHHHHHHHHHcCCCcc
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLS-VAKELGAD-NIVKVST-NLQDIAEEVEKIQKAMGTGID  256 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~-~~~~lg~~-~~~~~~~-~~~~~~~~i~~~~~~~~~~~d  256 (364)
                      .+.++||+|+ +.+|.+.+..+...|+ .|+.++++.++.+ +.++++.. ..+..|- ..+++.+.++..... -+.+|
T Consensus         5 ~~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-~g~id   82 (261)
T PRK08265          5 AGKVAIVTGGATLIGAAVARALVAAGA-RVAIVDIDADNGAAVAASLGERARFIATDITDDAAIERAVATVVAR-FGRVD   82 (261)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCeeEEEEecCCCHHHHHHHHHHHHHH-hCCCC
Confidence            4679999998 9999999999999999 5677777765443 44455532 1222221 223344444443332 24699


Q ss_pred             EEEECCCC
Q 017916          257 VSFDCAGF  264 (364)
Q Consensus       257 ~vid~~g~  264 (364)
                      ++|.++|.
T Consensus        83 ~lv~~ag~   90 (261)
T PRK08265         83 ILVNLACT   90 (261)
T ss_pred             EEEECCCC
Confidence            99998873

>PRK07109 short chain dehydrogenase; Provisional

Probab=96.20  E-value=0.15  Score=47.09  Aligned_cols=82  Identities=18%  Similarity=0.246  Sum_probs=51.0

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHH----HHcCCCe-EEecCC-CcccHHHHHHHHHHHcCC
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA----KELGADN-IVKVST-NLQDIAEEVEKIQKAMGT  253 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~----~~lg~~~-~~~~~~-~~~~~~~~i~~~~~~~~~  253 (364)
                      .+.+|||+|+ |++|.+.++.+...|+ .|+.+++++++.+.+    +..|... .+..|- +.+++.+.+..+.+. -+
T Consensus         7 ~~k~vlITGas~gIG~~la~~la~~G~-~Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d~~~v~~~~~~~~~~-~g   84 (334)
T PRK07109          7 GRQVVVITGASAGVGRATARAFARRGA-KVVLLARGEEGLEALAAEIRAAGGEALAVVADVADAEAVQAAADRAEEE-LG   84 (334)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHH-CC
Confidence            4678999998 9999999999988999 566677776654432    2345432 122221 223333333333322 24


Q ss_pred             CccEEEECCCC
Q 017916          254 GIDVSFDCAGF  264 (364)
Q Consensus       254 ~~d~vid~~g~  264 (364)
                      ++|++|+++|.
T Consensus        85 ~iD~lInnAg~   95 (334)
T PRK07109         85 PIDTWVNNAMV   95 (334)
T ss_pred             CCCEEEECCCc
Confidence            79999999874

>COG2226 UbiE Methylase involved in ubiquinone/menaquinone biosynthesis [Coenzyme metabolism]

Probab=96.20  E-value=0.1  Score=45.28  Aligned_cols=107  Identities=23%  Similarity=0.395  Sum_probs=74.3

Q ss_pred             HHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHc----CCCeEEecCCCcccHHHHHHHHHHH
Q 017916          175 RRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKEL----GADNIVKVSTNLQDIAEEVEKIQKA  250 (364)
Q Consensus       175 ~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~l----g~~~~~~~~~~~~~~~~~i~~~~~~  250 (364)
                      ....+++|++||=.++|. |-.|..+++..|-..|+++|-++..++.+++-    |... +.+...  +    ...+ ..
T Consensus        45 ~~~~~~~g~~vLDva~GT-Gd~a~~~~k~~g~g~v~~~D~s~~ML~~a~~k~~~~~~~~-i~fv~~--d----Ae~L-Pf  115 (238)
T COG2226          45 SLLGIKPGDKVLDVACGT-GDMALLLAKSVGTGEVVGLDISESMLEVAREKLKKKGVQN-VEFVVG--D----AENL-PF  115 (238)
T ss_pred             HhhCCCCCCEEEEecCCc-cHHHHHHHHhcCCceEEEEECCHHHHHHHHHHhhccCccc-eEEEEe--c----hhhC-CC
Confidence            345566999999987654 88999999999877899999999988887652    2222 111111  1    0001 11


Q ss_pred             cCCCccEEEECCCC------HHHHHHHHHhcccCCEEEEEcCCCCC
Q 017916          251 MGTGIDVSFDCAGF------NKTMSTALSATRAGGKVCLVGMGHHE  290 (364)
Q Consensus       251 ~~~~~d~vid~~g~------~~~~~~~~~~l~~~G~~v~~g~~~~~  290 (364)
                      ....+|++..+.|-      +..+.++.+.|+|+|+++.+.++...
T Consensus       116 ~D~sFD~vt~~fglrnv~d~~~aL~E~~RVlKpgG~~~vle~~~p~  161 (238)
T COG2226         116 PDNSFDAVTISFGLRNVTDIDKALKEMYRVLKPGGRLLVLEFSKPD  161 (238)
T ss_pred             CCCccCEEEeeehhhcCCCHHHHHHHHHHhhcCCeEEEEEEcCCCC
Confidence            14578988776652      46889999999999999998865544

>PF06325 PrmA: Ribosomal protein L11 methyltransferase (PrmA); InterPro: IPR010456 This family consists of several Ribosomal protein L11 methyltransferase sequences

Probab=96.18  E-value=0.029  Score=50.37  Aligned_cols=137  Identities=20%  Similarity=0.346  Sum_probs=70.6

Q ss_pred             CcceeEEEecCCceEECCCCCCccchhhhhhhHHHHHHHHHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecC
Q 017916          136 GSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVD  215 (364)
Q Consensus       136 g~~~~~v~~~~~~~~~lP~~~~~~~aa~~~~~~~a~~~l~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~  215 (364)
                      .+|.+|-.-+....+.+.+++.+-...=- +-......++.. .++|++||=.|.|. |..++.- ..+|++.|++++.+
T Consensus       118 P~w~~~~~~~~~~~I~idPg~AFGTG~H~-TT~lcl~~l~~~-~~~g~~vLDvG~GS-GILaiaA-~klGA~~v~a~DiD  193 (295)
T PF06325_consen  118 PSWEEYPEPPDEIVIEIDPGMAFGTGHHP-TTRLCLELLEKY-VKPGKRVLDVGCGS-GILAIAA-AKLGAKKVVAIDID  193 (295)
T ss_dssp             ETT----SSTTSEEEEESTTSSS-SSHCH-HHHHHHHHHHHH-SSTTSEEEEES-TT-SHHHHHH-HHTTBSEEEEEESS
T ss_pred             CCCcccCCCCCcEEEEECCCCcccCCCCH-HHHHHHHHHHHh-ccCCCEEEEeCCcH-HHHHHHH-HHcCCCeEEEecCC
Confidence            44555522244556666666655443200 111122233333 57889999988633 3333333 34599999999998


Q ss_pred             hhHHHHHHH----cCCCeEEecCCCcccHHHHHHHHHHHcCCCccEEEECCCCH---HHHHHHHHhcccCCEEEEEcCC
Q 017916          216 DYRLSVAKE----LGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFN---KTMSTALSATRAGGKVCLVGMG  287 (364)
Q Consensus       216 ~~~~~~~~~----lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid~~g~~---~~~~~~~~~l~~~G~~v~~g~~  287 (364)
                      +...+.+++    -|...-+.... ..+.          ...++|+|+-..-..   .....+.++|+++|.++..|..
T Consensus       194 p~Av~~a~~N~~~N~~~~~~~v~~-~~~~----------~~~~~dlvvANI~~~vL~~l~~~~~~~l~~~G~lIlSGIl  261 (295)
T PF06325_consen  194 PLAVEAARENAELNGVEDRIEVSL-SEDL----------VEGKFDLVVANILADVLLELAPDIASLLKPGGYLILSGIL  261 (295)
T ss_dssp             CHHHHHHHHHHHHTT-TTCEEESC-TSCT----------CCS-EEEEEEES-HHHHHHHHHHCHHHEEEEEEEEEEEEE
T ss_pred             HHHHHHHHHHHHHcCCCeeEEEEE-eccc----------ccccCCEEEECCCHHHHHHHHHHHHHhhCCCCEEEEcccc
Confidence            866555443    23332221111 1111          136799999766632   2334456678999999998743

Its genetic determinant is prmA, which forms a bifunctional operon with the downstream panF gene []. The role of L11 methylation in ribosome function is, as yet, unknown. Deletion of the prmA gene in Escherichia coli showed no obvious effect [] except for the production of undermethylated forms of L11 []. Methylation is the most common post-transcriptional modification to ribosomal proteins in all organisms. PrmA is the only bacterial enzyme that catalyses the methylation of a ribosomal protein [].; GO: 0008276 protein methyltransferase activity, 0006479 protein methylation, 0005737 cytoplasm; PDB: 3GRZ_B 1F3L_A 2NXJ_B 3CJT_I 3CJQ_G 2NXE_A 2NXC_A 2ZBP_A 3EGV_A 3CJS_A ....

>PRK07825 short chain dehydrogenase; Provisional

Probab=96.16  E-value=0.052  Score=48.32  Aligned_cols=81  Identities=28%  Similarity=0.279  Sum_probs=51.4

Q ss_pred             CCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHH-HHHcCCCeEEecCC-CcccHHHHHHHHHHHcCCCccEE
Q 017916          182 ETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSV-AKELGADNIVKVST-NLQDIAEEVEKIQKAMGTGIDVS  258 (364)
Q Consensus       182 g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~-~~~lg~~~~~~~~~-~~~~~~~~i~~~~~~~~~~~d~v  258 (364)
                      +.++||+|+ |.+|...++.+...|++ |+.+++++++.+. .+.++....+..|- ..+++.+.+..+... -+++|++
T Consensus         5 ~~~ilVtGasggiG~~la~~l~~~G~~-v~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~~id~l   82 (273)
T PRK07825          5 GKVVAITGGARGIGLATARALAALGAR-VAIGDLDEALAKETAAELGLVVGGPLDVTDPASFAAFLDAVEAD-LGPIDVL   82 (273)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCE-EEEEECCHHHHHHHHHHhccceEEEccCCCHHHHHHHHHHHHHH-cCCCCEE
Confidence            578999998 99999999988888994 6666677666543 34454222222222 223444444444332 2579999


Q ss_pred             EECCCC
Q 017916          259 FDCAGF  264 (364)
Q Consensus       259 id~~g~  264 (364)
                      |+++|.
T Consensus        83 i~~ag~   88 (273)
T PRK07825         83 VNNAGV   88 (273)
T ss_pred             EECCCc
Confidence            999873

>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]

Probab=96.16  E-value=0.068  Score=47.36  Aligned_cols=82  Identities=22%  Similarity=0.390  Sum_probs=53.2

Q ss_pred             CCCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChh----HHHHHHHcC-CC-eEEecCCCcccHHHHHHHHHHHcC
Q 017916          180 GPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDY----RLSVAKELG-AD-NIVKVSTNLQDIAEEVEKIQKAMG  252 (364)
Q Consensus       180 ~~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~----~~~~~~~lg-~~-~~~~~~~~~~~~~~~i~~~~~~~~  252 (364)
                      -.|+.|||+|+ +++|.+.++-...+|+ +++..+.+.+    ..+..++.| +. ...|. +..++.....++..+.. 
T Consensus        36 v~g~~vLITGgg~GlGr~ialefa~rg~-~~vl~Din~~~~~etv~~~~~~g~~~~y~cdi-s~~eei~~~a~~Vk~e~-  112 (300)
T KOG1201|consen   36 VSGEIVLITGGGSGLGRLIALEFAKRGA-KLVLWDINKQGNEETVKEIRKIGEAKAYTCDI-SDREEIYRLAKKVKKEV-  112 (300)
T ss_pred             ccCCEEEEeCCCchHHHHHHHHHHHhCC-eEEEEeccccchHHHHHHHHhcCceeEEEecC-CCHHHHHHHHHHHHHhc-
Confidence            36899999987 8999888887778888 5666665543    233444444 21 22233 33455555555555444 


Q ss_pred             CCccEEEECCCC
Q 017916          253 TGIDVSFDCAGF  264 (364)
Q Consensus       253 ~~~d~vid~~g~  264 (364)
                      +.+|++++.+|.
T Consensus       113 G~V~ILVNNAGI  124 (300)
T KOG1201|consen  113 GDVDILVNNAGI  124 (300)
T ss_pred             CCceEEEecccc
Confidence            489999998873

>COG4122 Predicted O-methyltransferase [General function prediction only]

Probab=96.15  E-value=0.16  Score=43.36  Aligned_cols=104  Identities=22%  Similarity=0.399  Sum_probs=71.7

Q ss_pred             cCCCCCCEEEEEcCCHHHHHHHHHHHHCC-CCEEEEEecChhHHHHHHH----cCCCeEEecCCCcccHHHHHHHHHHHc
Q 017916          177 ANIGPETNVLIMGAGPIGLVTMLGARAFG-APRIVIVDVDDYRLSVAKE----LGADNIVKVSTNLQDIAEEVEKIQKAM  251 (364)
Q Consensus       177 ~~~~~g~~VLI~Gag~~G~~ai~la~~~g-~~~vv~~~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~i~~~~~~~  251 (364)
                      ++.+...+||-.|. .+|..++.+|..+. -.++++++.++++.+.+++    .|....+..-.. .+..+.+++   ..
T Consensus        55 ~~~~~~k~iLEiGT-~~GySal~mA~~l~~~g~l~tiE~~~e~~~~A~~n~~~ag~~~~i~~~~~-gdal~~l~~---~~  129 (219)
T COG4122          55 ARLSGPKRILEIGT-AIGYSALWMALALPDDGRLTTIERDEERAEIARENLAEAGVDDRIELLLG-GDALDVLSR---LL  129 (219)
T ss_pred             HHhcCCceEEEeec-ccCHHHHHHHhhCCCCCeEEEEeCCHHHHHHHHHHHHHcCCcceEEEEec-CcHHHHHHh---cc
Confidence            44457788888885 34788889998876 3379999999998877664    566553221111 344444444   23


Q ss_pred             CCCccEEE-ECCC--CHHHHHHHHHhcccCCEEEEEc
Q 017916          252 GTGIDVSF-DCAG--FNKTMSTALSATRAGGKVCLVG  285 (364)
Q Consensus       252 ~~~~d~vi-d~~g--~~~~~~~~~~~l~~~G~~v~~g  285 (364)
                      .+.||+|| |+.=  -++.++.+++.|++||.++.=+
T Consensus       130 ~~~fDliFIDadK~~yp~~le~~~~lLr~GGliv~DN  166 (219)
T COG4122         130 DGSFDLVFIDADKADYPEYLERALPLLRPGGLIVADN  166 (219)
T ss_pred             CCCccEEEEeCChhhCHHHHHHHHHHhCCCcEEEEee
Confidence            57899997 5432  2678899999999999988755

>PRK07806 short chain dehydrogenase; Provisional

Probab=96.14  E-value=0.16  Score=44.31  Aligned_cols=104  Identities=22%  Similarity=0.235  Sum_probs=59.5

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecCh-hHHH-HH---HHcCCC-eEEecCC-CcccHHHHHHHHHHHcC
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDD-YRLS-VA---KELGAD-NIVKVST-NLQDIAEEVEKIQKAMG  252 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~-~~~~-~~---~~lg~~-~~~~~~~-~~~~~~~~i~~~~~~~~  252 (364)
                      .+.++||+|+ |.+|...+..+...|++ |+++.++. ++.+ +.   +..+.. ..+..+- ..+++.+.++.+... .
T Consensus         5 ~~k~vlItGasggiG~~l~~~l~~~G~~-V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~   82 (248)
T PRK07806          5 PGKTALVTGSSRGIGADTAKILAGAGAH-VVVNYRQKAPRANKVVAEIEAAGGRASAVGADLTDEESVAALMDTAREE-F   82 (248)
T ss_pred             CCcEEEEECCCCcHHHHHHHHHHHCCCE-EEEEeCCchHhHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHh-C
Confidence            4678999998 99999999998889995 55555543 2222 22   222322 1222221 223333333333322 2


Q ss_pred             CCccEEEECCCCH-------------------HHHHHHHHhcccCCEEEEEcC
Q 017916          253 TGIDVSFDCAGFN-------------------KTMSTALSATRAGGKVCLVGM  286 (364)
Q Consensus       253 ~~~d~vid~~g~~-------------------~~~~~~~~~l~~~G~~v~~g~  286 (364)
                      +++|++|.++|..                   ...+.+.+.+...|+++.++.
T Consensus        83 ~~~d~vi~~ag~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~iv~isS  135 (248)
T PRK07806         83 GGLDALVLNASGGMESGMDEDYAMRLNRDAQRNLARAALPLMPAGSRVVFVTS  135 (248)
T ss_pred             CCCcEEEECCCCCCCCCCCcceeeEeeeHHHHHHHHHHHhhccCCceEEEEeC
Confidence            4689999877632                   234455555566688887753

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.13  E-value=0.016  Score=55.76  Aligned_cols=91  Identities=11%  Similarity=0.145  Sum_probs=57.4

Q ss_pred             HcCCCCCCEEE----EEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCe-EEecCCCcccHHHHHHHHHH
Q 017916          176 RANIGPETNVL----IMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADN-IVKVSTNLQDIAEEVEKIQK  249 (364)
Q Consensus       176 ~~~~~~g~~VL----I~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~-~~~~~~~~~~~~~~i~~~~~  249 (364)
                      ..++++|+++|    |+|+ |++|.+++|+++..|++ |+.+.....+....+..+... +++  .....+.+.+..+  
T Consensus        28 l~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~g~~-v~~~~~~~~~~~~~~~~~~~~~~~d--~~~~~~~~~l~~~--  102 (450)
T PRK08261         28 LRRYRPGQPLLDGPVLVGGAGRLAEALAALLAGLGYD-VVANNDGGLTWAAGWGDRFGALVFD--ATGITDPADLKAL--  102 (450)
T ss_pred             ccCCCCCCCCCCCceEEccCchhHHHHHHHHhhCCCe-eeecCccccccccCcCCcccEEEEE--CCCCCCHHHHHHH--
Confidence            36678999998    8876 99999999999999995 555544444333333334332 333  2223333333322  


Q ss_pred             HcCCCccEEEECCCCHHHHHHHHHhcccCCEEEEEcC
Q 017916          250 AMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGM  286 (364)
Q Consensus       250 ~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~  286 (364)
                                     .+.....++.|.++|+++.++.
T Consensus       103 ---------------~~~~~~~l~~l~~~griv~i~s  124 (450)
T PRK08261        103 ---------------YEFFHPVLRSLAPCGRVVVLGR  124 (450)
T ss_pred             ---------------HHHHHHHHHhccCCCEEEEEcc
Confidence                           1345566777888888888764

>PRK00811 spermidine synthase; Provisional

Probab=96.11  E-value=0.034  Score=49.91  Aligned_cols=98  Identities=19%  Similarity=0.207  Sum_probs=64.1

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHc-C-----C--C-eEEecCCCcccHHHHHHHHHHH
Q 017916          180 GPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKEL-G-----A--D-NIVKVSTNLQDIAEEVEKIQKA  250 (364)
Q Consensus       180 ~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~l-g-----~--~-~~~~~~~~~~~~~~~i~~~~~~  250 (364)
                      .+.++||+.|+|. |..+..+++..+...|.+++.+++-.+.+++. .     .  + .+..+   ..|..+.+    ..
T Consensus        75 ~~p~~VL~iG~G~-G~~~~~~l~~~~~~~V~~VEid~~vv~~a~~~~~~~~~~~~~d~rv~v~---~~Da~~~l----~~  146 (283)
T PRK00811         75 PNPKRVLIIGGGD-GGTLREVLKHPSVEKITLVEIDERVVEVCRKYLPEIAGGAYDDPRVELV---IGDGIKFV----AE  146 (283)
T ss_pred             CCCCEEEEEecCc-hHHHHHHHcCCCCCEEEEEeCCHHHHHHHHHHhHHhccccccCCceEEE---ECchHHHH----hh
Confidence            4567999998765 66777778777777899999999888887763 1     1  1 11111   12322222    22


Q ss_pred             cCCCccEEEECCC----------CHHHHHHHHHhcccCCEEEEEc
Q 017916          251 MGTGIDVSFDCAG----------FNKTMSTALSATRAGGKVCLVG  285 (364)
Q Consensus       251 ~~~~~d~vid~~g----------~~~~~~~~~~~l~~~G~~v~~g  285 (364)
                      ..+.+|+||.-..          +.+.++.+.+.|+++|.++...
T Consensus       147 ~~~~yDvIi~D~~dp~~~~~~l~t~ef~~~~~~~L~~gGvlv~~~  191 (283)
T PRK00811        147 TENSFDVIIVDSTDPVGPAEGLFTKEFYENCKRALKEDGIFVAQS  191 (283)
T ss_pred             CCCcccEEEECCCCCCCchhhhhHHHHHHHHHHhcCCCcEEEEeC
Confidence            3568999885321          1345678899999999998753

>PRK07326 short chain dehydrogenase; Provisional

Probab=96.10  E-value=0.15  Score=44.14  Aligned_cols=82  Identities=27%  Similarity=0.266  Sum_probs=50.4

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHH-HHHHcCC---CeEEecC-CCcccHHHHHHHHHHHcCCC
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLS-VAKELGA---DNIVKVS-TNLQDIAEEVEKIQKAMGTG  254 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~-~~~~lg~---~~~~~~~-~~~~~~~~~i~~~~~~~~~~  254 (364)
                      .+.++||+|+ |.+|..+++.+...|++ |+++++++++.. +.+.+..   ...+..+ ....++.+.++.+.+. ..+
T Consensus         5 ~~~~ilItGatg~iG~~la~~l~~~g~~-V~~~~r~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~~   82 (237)
T PRK07326          5 KGKVALITGGSKGIGFAIAEALLAEGYK-VAITARDQKELEEAAAELNNKGNVLGLAADVRDEADVQRAVDAIVAA-FGG   82 (237)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHCCCE-EEEeeCCHHHHHHHHHHHhccCcEEEEEccCCCHHHHHHHHHHHHHH-cCC
Confidence            4678999998 99999999988888995 677777665543 3344431   1122222 1223334444443332 247


Q ss_pred             ccEEEECCCC
Q 017916          255 IDVSFDCAGF  264 (364)
Q Consensus       255 ~d~vid~~g~  264 (364)
                      +|++|++.|.
T Consensus        83 ~d~vi~~ag~   92 (237)
T PRK07326         83 LDVLIANAGV   92 (237)
T ss_pred             CCEEEECCCC
Confidence            9999998763

>PRK08177 short chain dehydrogenase; Provisional

Probab=96.09  E-value=0.056  Score=46.58  Aligned_cols=78  Identities=21%  Similarity=0.241  Sum_probs=48.3

Q ss_pred             CEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCc-ccHHHHHHHHHHHcCCCccEEEE
Q 017916          183 TNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNL-QDIAEEVEKIQKAMGTGIDVSFD  260 (364)
Q Consensus       183 ~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~d~vid  260 (364)
                      .+++|+|+ |.+|...+..+...|+ .|++++++.++.+.+++++-......+-.+ +++.+..+.+   ...++|++|.
T Consensus         2 k~vlItG~sg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~---~~~~id~vi~   77 (225)
T PRK08177          2 RTALIIGASRGLGLGLVDRLLERGW-QVTATVRGPQQDTALQALPGVHIEKLDMNDPASLDQLLQRL---QGQRFDLLFV   77 (225)
T ss_pred             CEEEEeCCCchHHHHHHHHHHhCCC-EEEEEeCCCcchHHHHhccccceEEcCCCCHHHHHHHHHHh---hcCCCCEEEE
Confidence            46899998 9999999888888899 577777776665555544322222222211 2222222222   1347999998


Q ss_pred             CCCC
Q 017916          261 CAGF  264 (364)
Q Consensus       261 ~~g~  264 (364)
                      ++|.
T Consensus        78 ~ag~   81 (225)
T PRK08177         78 NAGI   81 (225)
T ss_pred             cCcc
Confidence            8763

>PRK05866 short chain dehydrogenase; Provisional

Probab=96.07  E-value=0.084  Score=47.67  Aligned_cols=82  Identities=24%  Similarity=0.311  Sum_probs=50.5

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHH-H---HcCCC-eEEecCCC-cccHHHHHHHHHHHcCC
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-K---ELGAD-NIVKVSTN-LQDIAEEVEKIQKAMGT  253 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~-~---~lg~~-~~~~~~~~-~~~~~~~i~~~~~~~~~  253 (364)
                      .+.++||+|+ |++|.+.++.+...|+ .|+.++++.++.+.+ +   ..+.. ..+..+-. .+++.+.++.+... -+
T Consensus        39 ~~k~vlItGasggIG~~la~~La~~G~-~Vi~~~R~~~~l~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~-~g  116 (293)
T PRK05866         39 TGKRILLTGASSGIGEAAAEQFARRGA-TVVAVARREDLLDAVADRITRAGGDAMAVPCDLSDLDAVDALVADVEKR-IG  116 (293)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH-cC
Confidence            3578999998 9999999999888899 577777776654433 2   22322 12222222 22333333333222 24


Q ss_pred             CccEEEECCCC
Q 017916          254 GIDVSFDCAGF  264 (364)
Q Consensus       254 ~~d~vid~~g~  264 (364)
                      ++|++|+++|.
T Consensus       117 ~id~li~~AG~  127 (293)
T PRK05866        117 GVDILINNAGR  127 (293)
T ss_pred             CCCEEEECCCC
Confidence            79999999874

>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

Probab=96.03  E-value=0.089  Score=46.53  Aligned_cols=81  Identities=22%  Similarity=0.263  Sum_probs=51.9

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHH-HcCCC-eEEecCC-CcccHHHHHHHHHHHcCCCcc
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAK-ELGAD-NIVKVST-NLQDIAEEVEKIQKAMGTGID  256 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~-~lg~~-~~~~~~~-~~~~~~~~i~~~~~~~~~~~d  256 (364)
                      ++.++||+|+ +.+|...++.+...|+ .|+.+++++++.+.+. +++.. ..+..+- ..++..+.++...+. -+++|
T Consensus         5 ~~k~vlVtGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~g~id   82 (263)
T PRK06200          5 HGQVALITGGGSGIGRALVERFLAEGA-RVAVLERSAEKLASLRQRFGDHVLVVEGDVTSYADNQRAVDQTVDA-FGKLD   82 (263)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHh-cCCCC
Confidence            4679999998 9999999999999999 5677777776655443 34421 1222221 223334444444332 34799


Q ss_pred             EEEECCC
Q 017916          257 VSFDCAG  263 (364)
Q Consensus       257 ~vid~~g  263 (364)
                      ++|+++|
T Consensus        83 ~li~~ag   89 (263)
T PRK06200         83 CFVGNAG   89 (263)
T ss_pred             EEEECCC
Confidence            9999887

>PF01262 AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal domain; InterPro: IPR007698 Alanine dehydrogenases (1

Probab=96.01  E-value=0.029  Score=46.18  Aligned_cols=100  Identities=19%  Similarity=0.276  Sum_probs=64.3

Q ss_pred             CCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEe-cCCC--------------cccHHHHHHH
Q 017916          182 ETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVK-VSTN--------------LQDIAEEVEK  246 (364)
Q Consensus       182 g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~-~~~~--------------~~~~~~~i~~  246 (364)
                      .-+|+|+|+|.+|+.|+.+++.+|+ .+++.+...++.+..+.++...+.. +...              .......+.+
T Consensus        20 p~~vvv~G~G~vg~gA~~~~~~lGa-~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~   98 (168)
T PF01262_consen   20 PAKVVVTGAGRVGQGAAEIAKGLGA-EVVVPDERPERLRQLESLGAYFIEVDYEDHLERKDFDKADYYEHPESYESNFAE   98 (168)
T ss_dssp             T-EEEEESTSHHHHHHHHHHHHTT--EEEEEESSHHHHHHHHHTTTEESEETTTTTTTSB-CCHHHCHHHCCHHHHHHHH
T ss_pred             CeEEEEECCCHHHHHHHHHHhHCCC-EEEeccCCHHHHHhhhcccCceEEEcccccccccccchhhhhHHHHHhHHHHHH
Confidence            4789999999999999999999999 6788888888888888877654332 1110              1122222222


Q ss_pred             HHHHcCCCccEEEECC---C--CHH-HHHHHHHhcccCCEEEEEcC
Q 017916          247 IQKAMGTGIDVSFDCA---G--FNK-TMSTALSATRAGGKVCLVGM  286 (364)
Q Consensus       247 ~~~~~~~~~d~vid~~---g--~~~-~~~~~~~~l~~~G~~v~~g~  286 (364)
                      ..    ..+|++|.+.   +  .+. ...+.++.|+++..++++..
T Consensus        99 ~i----~~~d~vI~~~~~~~~~~P~lvt~~~~~~m~~gsvIvDis~  140 (168)
T PF01262_consen   99 FI----APADIVIGNGLYWGKRAPRLVTEEMVKSMKPGSVIVDISC  140 (168)
T ss_dssp             HH----HH-SEEEEHHHBTTSS---SBEHHHHHTSSTTEEEEETTG
T ss_pred             HH----hhCcEEeeecccCCCCCCEEEEhHHhhccCCCceEEEEEe
Confidence            22    3578888532   1  122 22467888999999998863

4.1.1 from EC) and pyridine nucleotide transhydrogenase (1.6.1.1 from EC) have been shown to share regions of similarity []. Alanine dehydrogenase catalyzes the NAD-dependent reversible reductive amination of pyruvate into alanine. Pyridine nucleotide transhydrogenase catalyzes the reduction of NADP+ to NADPH with the concomitant oxidation of NADH to NAD+. This enzyme is located in the plasma membrane of prokaryotes and in the inner membrane of the mitochondria of eukaryotes. The transhydrogenation between NADH and NADP is coupled with the translocation of a proton across the membrane. In prokaryotes the enzyme is composed of two different subunits, an alpha chain (gene pntA) and a beta chain (gene pntB), while in eukaryotes it is a single chain protein. The sequence of alanine dehydrogenase from several bacterial species are related with those of the alpha subunit of bacterial pyridine nucleotide transhydrogenase and of the N-terminal half of the eukaryotic enzyme. The two most conserved regions correspond respectively to the N-terminal extremity of these proteins and to a central glycine-rich region which is part of the NAD(H)-binding site. This is a C-terminal domain of alanine dehydrogenases (1.4.1.1 from EC). This domain is also found in the lysine 2-oxoglutarate reductases. ; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1KOL_A 2EEZ_F 1L7E_C 1PTJ_B 1NM5_A 1HZZ_B 1U2G_B 2FSV_A 2FR8_A 1U2D_A ....

>PRK06196 oxidoreductase; Provisional

Probab=95.98  E-value=0.067  Score=48.85  Aligned_cols=81  Identities=17%  Similarity=0.278  Sum_probs=49.4

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHH-HHHcCCCeEEecCCC-cccHHHHHHHHHHHcCCCccE
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSV-AKELGADNIVKVSTN-LQDIAEEVEKIQKAMGTGIDV  257 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~-~~~lg~~~~~~~~~~-~~~~~~~i~~~~~~~~~~~d~  257 (364)
                      .+.+|||+|+ |.+|.+++..+...|+ .|+.+.++.++.+. ..++.....+..|-. .+++.+.+..+... .+++|+
T Consensus        25 ~~k~vlITGasggIG~~~a~~L~~~G~-~Vv~~~R~~~~~~~~~~~l~~v~~~~~Dl~d~~~v~~~~~~~~~~-~~~iD~  102 (315)
T PRK06196         25 SGKTAIVTGGYSGLGLETTRALAQAGA-HVIVPARRPDVAREALAGIDGVEVVMLDLADLESVRAFAERFLDS-GRRIDI  102 (315)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhhhCeEEEccCCCHHHHHHHHHHHHhc-CCCCCE
Confidence            4679999998 9999999998888999 46666676655433 233321122222221 22333333333221 357999


Q ss_pred             EEECCC
Q 017916          258 SFDCAG  263 (364)
Q Consensus       258 vid~~g  263 (364)
                      +|+++|
T Consensus       103 li~nAg  108 (315)
T PRK06196        103 LINNAG  108 (315)
T ss_pred             EEECCC
Confidence            999887

>PRK12828 short chain dehydrogenase; Provisional

Probab=95.97  E-value=0.078  Score=45.88  Aligned_cols=80  Identities=19%  Similarity=0.189  Sum_probs=48.0

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHH-HHHHH---cCCCeE-EecCCCcccHHHHHHHHHHHcCCC
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRL-SVAKE---LGADNI-VKVSTNLQDIAEEVEKIQKAMGTG  254 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~-~~~~~---lg~~~~-~~~~~~~~~~~~~i~~~~~~~~~~  254 (364)
                      ++.++||+|+ |.+|..+++.+...|++ |+.++++.++. +.+++   .+...+ .|.. +.+++.+.++..... -++
T Consensus         6 ~~k~vlItGatg~iG~~la~~l~~~G~~-v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~-~~~~~~~~~~~~~~~-~~~   82 (239)
T PRK12828          6 QGKVVAITGGFGGLGRATAAWLAARGAR-VALIGRGAAPLSQTLPGVPADALRIGGIDLV-DPQAARRAVDEVNRQ-FGR   82 (239)
T ss_pred             CCCEEEEECCCCcHhHHHHHHHHHCCCe-EEEEeCChHhHHHHHHHHhhcCceEEEeecC-CHHHHHHHHHHHHHH-hCC
Confidence            3689999998 99999999988888994 67776655442 22222   233221 1221 123333333333222 247


Q ss_pred             ccEEEECCC
Q 017916          255 IDVSFDCAG  263 (364)
Q Consensus       255 ~d~vid~~g  263 (364)
                      +|++|.+.|
T Consensus        83 ~d~vi~~ag   91 (239)
T PRK12828         83 LDALVNIAG   91 (239)
T ss_pred             cCEEEECCc
Confidence            999999876

>PRK07677 short chain dehydrogenase; Provisional

Probab=95.97  E-value=0.082  Score=46.41  Aligned_cols=80  Identities=28%  Similarity=0.346  Sum_probs=49.6

Q ss_pred             CCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHH-H---cCCC-eEEecCC-CcccHHHHHHHHHHHcCCC
Q 017916          182 ETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAK-E---LGAD-NIVKVST-NLQDIAEEVEKIQKAMGTG  254 (364)
Q Consensus       182 g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~-~---lg~~-~~~~~~~-~~~~~~~~i~~~~~~~~~~  254 (364)
                      |.++||+|+ +.+|.+.++.+...|+ .|++++++.++.+.+. .   .+.. ..+..|- ..+++.+.+.++.+.. ++
T Consensus         1 ~k~~lItG~s~giG~~ia~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~   78 (252)
T PRK07677          1 EKVVIITGGSSGMGKAMAKRFAEEGA-NVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVRNPEDVQKMVEQIDEKF-GR   78 (252)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHh-CC
Confidence            468999998 9999999999999999 6777777665543322 2   2221 2232222 2233333343333322 46


Q ss_pred             ccEEEECCC
Q 017916          255 IDVSFDCAG  263 (364)
Q Consensus       255 ~d~vid~~g  263 (364)
                      +|++|++.|
T Consensus        79 id~lI~~ag   87 (252)
T PRK07677         79 IDALINNAA   87 (252)
T ss_pred             ccEEEECCC
Confidence            999999887

>PRK05872 short chain dehydrogenase; Provisional

Probab=95.96  E-value=0.071  Score=48.22  Aligned_cols=81  Identities=31%  Similarity=0.451  Sum_probs=52.8

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHH-HHHcCCC-eE----EecCCCcccHHHHHHHHHHHcCC
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSV-AKELGAD-NI----VKVSTNLQDIAEEVEKIQKAMGT  253 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~-~~~lg~~-~~----~~~~~~~~~~~~~i~~~~~~~~~  253 (364)
                      +|.++||+|+ |++|.++++.+...|+ .|+.+.++.++.+. .++++.. .+    .|.. +.++..+.+.++... .+
T Consensus         8 ~gk~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~Dv~-d~~~v~~~~~~~~~~-~g   84 (296)
T PRK05872          8 AGKVVVVTGAARGIGAELARRLHARGA-KLALVDLEEAELAALAAELGGDDRVLTVVADVT-DLAAMQAAAEEAVER-FG   84 (296)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhcCCCcEEEEEecCC-CHHHHHHHHHHHHHH-cC
Confidence            5789999998 9999999999999999 56777777666543 4455421 11    2221 223333444443332 24


Q ss_pred             CccEEEECCCC
Q 017916          254 GIDVSFDCAGF  264 (364)
Q Consensus       254 ~~d~vid~~g~  264 (364)
                      ++|++|+++|.
T Consensus        85 ~id~vI~nAG~   95 (296)
T PRK05872         85 GIDVVVANAGI   95 (296)
T ss_pred             CCCEEEECCCc
Confidence            79999999884

>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional

Probab=95.94  E-value=0.094  Score=46.34  Aligned_cols=81  Identities=17%  Similarity=0.251  Sum_probs=48.8

Q ss_pred             CCCEEEEEcCC---HHHHHHHHHHHHCCCCEEEEEecChhHH----HHHHHcCCCeEEecCC-CcccHHHHHHHHHHHcC
Q 017916          181 PETNVLIMGAG---PIGLVTMLGARAFGAPRIVIVDVDDYRL----SVAKELGADNIVKVST-NLQDIAEEVEKIQKAMG  252 (364)
Q Consensus       181 ~g~~VLI~Gag---~~G~~ai~la~~~g~~~vv~~~~~~~~~----~~~~~lg~~~~~~~~~-~~~~~~~~i~~~~~~~~  252 (364)
                      .|.++||+|++   ++|.+.++.+...|++ |+.+.++.+..    ++.++++....+..|- ..++..+.+....+.. 
T Consensus         9 ~~k~~lItGas~g~GIG~a~a~~la~~G~~-v~l~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~-   86 (258)
T PRK07533          9 AGKRGLVVGIANEQSIAWGCARAFRALGAE-LAVTYLNDKARPYVEPLAEELDAPIFLPLDVREPGQLEAVFARIAEEW-   86 (258)
T ss_pred             CCCEEEEECCCCCCcHHHHHHHHHHHcCCE-EEEEeCChhhHHHHHHHHHhhccceEEecCcCCHHHHHHHHHHHHHHc-
Confidence            46899999873   8999999998889995 55555554322    2233444323333332 2233444444433322 


Q ss_pred             CCccEEEECCC
Q 017916          253 TGIDVSFDCAG  263 (364)
Q Consensus       253 ~~~d~vid~~g  263 (364)
                      +++|++|+++|
T Consensus        87 g~ld~lv~nAg   97 (258)
T PRK07533         87 GRLDFLLHSIA   97 (258)
T ss_pred             CCCCEEEEcCc
Confidence            47999999886

>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E

Probab=95.93  E-value=0.16  Score=43.11  Aligned_cols=35  Identities=43%  Similarity=0.545  Sum_probs=30.8

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecC
Q 017916          181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVD  215 (364)
Q Consensus       181 ~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~  215 (364)
                      .+.+|+|.|+|++|..+++.+...|...+..++.+
T Consensus        20 ~~~~VlviG~GglGs~ia~~La~~Gv~~i~lvD~d   54 (202)
T TIGR02356        20 LNSHVLIIGAGGLGSPAALYLAGAGVGTIVIVDDD   54 (202)
T ss_pred             cCCCEEEECCCHHHHHHHHHHHHcCCCeEEEecCC
Confidence            35789999999999999999999999888888765

coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.

>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=95.93  E-value=0.12  Score=45.20  Aligned_cols=81  Identities=17%  Similarity=0.272  Sum_probs=50.5

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHH----HHcCCC-eEEecCCC-cccHHHHHHHHHHHcCC
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA----KELGAD-NIVKVSTN-LQDIAEEVEKIQKAMGT  253 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~----~~lg~~-~~~~~~~~-~~~~~~~i~~~~~~~~~  253 (364)
                      ++.++||+|+ |.+|..+++.+...|+ .|+.++++.++.+..    +..+.. ..+..+-. .+++.+.++.+... .+
T Consensus         4 ~~~~~lItG~~g~iG~~~a~~l~~~G~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~   81 (253)
T PRK08217          4 KDKVIVITGGAQGLGRAMAEYLAQKGA-KLALIDLNQEKLEEAVAECGALGTEVRGYAANVTDEEDVEATFAQIAED-FG   81 (253)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHH-cC
Confidence            4789999998 9999999999998999 577777776554322    223432 12223222 22333333333322 24


Q ss_pred             CccEEEECCC
Q 017916          254 GIDVSFDCAG  263 (364)
Q Consensus       254 ~~d~vid~~g  263 (364)
                      ++|.+|.++|
T Consensus        82 ~id~vi~~ag   91 (253)
T PRK08217         82 QLNGLINNAG   91 (253)
T ss_pred             CCCEEEECCC
Confidence            7899999887

>PRK01581 speE spermidine synthase; Validated

Probab=95.91  E-value=0.22  Score=45.90  Aligned_cols=98  Identities=16%  Similarity=0.125  Sum_probs=64.0

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCC-----------CeEEecCCCcccHHHHHHHHH
Q 017916          180 GPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGA-----------DNIVKVSTNLQDIAEEVEKIQ  248 (364)
Q Consensus       180 ~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~-----------~~~~~~~~~~~~~~~~i~~~~  248 (364)
                      ....+|||.|+|. |.++..+++..+...|.+++.+++-.+.++.+..           ..+...   -.|..+.+    
T Consensus       149 ~~PkrVLIIGgGd-G~tlrelLk~~~v~~It~VEIDpeVIelAr~~~~L~~~~~~~~~DpRV~vv---i~Da~~fL----  220 (374)
T PRK01581        149 IDPKRVLILGGGD-GLALREVLKYETVLHVDLVDLDGSMINMARNVPELVSLNKSAFFDNRVNVH---VCDAKEFL----  220 (374)
T ss_pred             CCCCEEEEECCCH-HHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhccccchhccccCCCCceEEE---ECcHHHHH----
Confidence            4457999998754 6677777777666789999999998998886310           011000   12323323    


Q ss_pred             HHcCCCccEEEECCCC-----------HHHHHHHHHhcccCCEEEEEc
Q 017916          249 KAMGTGIDVSFDCAGF-----------NKTMSTALSATRAGGKVCLVG  285 (364)
Q Consensus       249 ~~~~~~~d~vid~~g~-----------~~~~~~~~~~l~~~G~~v~~g  285 (364)
                      ......+|+||--...           .+.+..+.+.|+|+|.++.-.
T Consensus       221 ~~~~~~YDVIIvDl~DP~~~~~~~LyT~EFy~~~~~~LkPgGV~V~Qs  268 (374)
T PRK01581        221 SSPSSLYDVIIIDFPDPATELLSTLYTSELFARIATFLTEDGAFVCQS  268 (374)
T ss_pred             HhcCCCccEEEEcCCCccccchhhhhHHHHHHHHHHhcCCCcEEEEec
Confidence            2235679998743221           346778899999999988764

>PRK07831 short chain dehydrogenase; Provisional

Probab=95.91  E-value=0.1  Score=46.04  Aligned_cols=84  Identities=27%  Similarity=0.345  Sum_probs=50.9

Q ss_pred             CCCCCEEEEEcC-C-HHHHHHHHHHHHCCCCEEEEEecChhHHHHHH-H----cCCCeE--EecCCCc-ccHHHHHHHHH
Q 017916          179 IGPETNVLIMGA-G-PIGLVTMLGARAFGAPRIVIVDVDDYRLSVAK-E----LGADNI--VKVSTNL-QDIAEEVEKIQ  248 (364)
Q Consensus       179 ~~~g~~VLI~Ga-g-~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~-~----lg~~~~--~~~~~~~-~~~~~~i~~~~  248 (364)
                      +.++.++||+|+ | ++|.++++.+...|++ |+++++++++.+... +    ++...+  +..+-.+ ++..+.++...
T Consensus        14 ~~~~k~vlItG~sg~gIG~~ia~~l~~~G~~-V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~   92 (262)
T PRK07831         14 LLAGKVVLVTAAAGTGIGSATARRALEEGAR-VVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEAQVDALIDAAV   92 (262)
T ss_pred             ccCCCEEEEECCCcccHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHHHHHHHHHHHH
Confidence            345789999987 6 7999999999999995 666666665543322 1    343222  2222211 22333333332


Q ss_pred             HHcCCCccEEEECCCC
Q 017916          249 KAMGTGIDVSFDCAGF  264 (364)
Q Consensus       249 ~~~~~~~d~vid~~g~  264 (364)
                      .. .+++|++|+++|.
T Consensus        93 ~~-~g~id~li~~ag~  107 (262)
T PRK07831         93 ER-LGRLDVLVNNAGL  107 (262)
T ss_pred             HH-cCCCCEEEECCCC
Confidence            22 2479999999984

>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

Probab=95.90  E-value=0.083  Score=46.71  Aligned_cols=81  Identities=26%  Similarity=0.235  Sum_probs=50.6

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHH-cCCC-eEEecCC-CcccHHHHHHHHHHHcCCCcc
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKE-LGAD-NIVKVST-NLQDIAEEVEKIQKAMGTGID  256 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~-lg~~-~~~~~~~-~~~~~~~~i~~~~~~~~~~~d  256 (364)
                      ++.+++|+|+ |.+|.+.++.+...|+ .|+.++++.++.+.+.+ .+.. ..+..+- ...+..+.++++.+. -+++|
T Consensus         4 ~~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~g~id   81 (262)
T TIGR03325         4 KGEVVLVTGGASGLGRAIVDRFVAEGA-RVAVLDKSAAGLQELEAAHGDAVVGVEGDVRSLDDHKEAVARCVAA-FGKID   81 (262)
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhhcCCceEEEEeccCCHHHHHHHHHHHHHH-hCCCC
Confidence            4689999998 9999999999988999 56777777666554443 3321 1121111 112333334443332 24789


Q ss_pred             EEEECCC
Q 017916          257 VSFDCAG  263 (364)
Q Consensus       257 ~vid~~g  263 (364)
                      ++|+++|
T Consensus        82 ~li~~Ag   88 (262)
T TIGR03325        82 CLIPNAG   88 (262)
T ss_pred             EEEECCC
Confidence            9999886

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.

>PRK06841 short chain dehydrogenase; Provisional

Probab=95.89  E-value=0.11  Score=45.69  Aligned_cols=82  Identities=23%  Similarity=0.241  Sum_probs=51.4

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCe--EEecCCC-cccHHHHHHHHHHHcCCCcc
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADN--IVKVSTN-LQDIAEEVEKIQKAMGTGID  256 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~--~~~~~~~-~~~~~~~i~~~~~~~~~~~d  256 (364)
                      .+.++||+|+ |.+|...++.+...|+ .|+.+.++.+..+...++....  .+..+-. .+++.+.+..+... -.++|
T Consensus        14 ~~k~vlItGas~~IG~~la~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-~~~~d   91 (255)
T PRK06841         14 SGKVAVVTGGASGIGHAIAELFAAKGA-RVALLDRSEDVAEVAAQLLGGNAKGLVCDVSDSQSVEAAVAAVISA-FGRID   91 (255)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHH-hCCCC
Confidence            4679999998 9999999999888999 5677777766555554443221  2222221 22333333333322 24799


Q ss_pred             EEEECCCC
Q 017916          257 VSFDCAGF  264 (364)
Q Consensus       257 ~vid~~g~  264 (364)
                      ++|.++|.
T Consensus        92 ~vi~~ag~   99 (255)
T PRK06841         92 ILVNSAGV   99 (255)
T ss_pred             EEEECCCC
Confidence            99998874

>TIGR00446 nop2p NOL1/NOP2/sun family putative RNA methylase

Probab=95.88  E-value=0.33  Score=43.11  Aligned_cols=102  Identities=23%  Similarity=0.247  Sum_probs=63.8

Q ss_pred             HcCCCCCCEEEEEcCCHHHHHHHHHHHHCC-CCEEEEEecChhHHHHHH----HcCCCeEEecCCCcccHHHHHHHHHHH
Q 017916          176 RANIGPETNVLIMGAGPIGLVTMLGARAFG-APRIVIVDVDDYRLSVAK----ELGADNIVKVSTNLQDIAEEVEKIQKA  250 (364)
Q Consensus       176 ~~~~~~g~~VLI~Gag~~G~~ai~la~~~g-~~~vv~~~~~~~~~~~~~----~lg~~~~~~~~~~~~~~~~~i~~~~~~  250 (364)
                      ...+++|++||=.|+|+ |..++.++..++ ...|++++.++++.+.++    .+|...+.....   |..    .+.. 
T Consensus        66 ~l~~~~g~~VLDl~ag~-G~kt~~la~~~~~~g~v~a~D~~~~~l~~~~~n~~~~g~~~v~~~~~---D~~----~~~~-  136 (264)
T TIGR00446        66 ALEPDPPERVLDMAAAP-GGKTTQISALMKNEGAIVANEFSKSRTKVLIANINRCGVLNVAVTNF---DGR----VFGA-  136 (264)
T ss_pred             HhCCCCcCEEEEECCCc-hHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHcCCCcEEEecC---CHH----Hhhh-
Confidence            35678999998887654 455556666553 237999999998876654    456654322222   211    1111 


Q ss_pred             cCCCccEEE-E--CCCC-------------------------HHHHHHHHHhcccCCEEEEEcC
Q 017916          251 MGTGIDVSF-D--CAGF-------------------------NKTMSTALSATRAGGKVCLVGM  286 (364)
Q Consensus       251 ~~~~~d~vi-d--~~g~-------------------------~~~~~~~~~~l~~~G~~v~~g~  286 (364)
                      ....+|.|+ |  |+|.                         .+.+..+++.|+++|+++....
T Consensus       137 ~~~~fD~Vl~D~Pcsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~iL~~a~~~lkpgG~lvYstc  200 (264)
T TIGR00446       137 AVPKFDAILLDAPCSGEGVIRKDPSRKKNWSEEDIQEISALQKELIDSAFDALKPGGVLVYSTC  200 (264)
T ss_pred             hccCCCEEEEcCCCCCCcccccChhhhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEeC
Confidence            123599987 4  4543                         1366778889999999986643

>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional

Probab=95.88  E-value=0.098  Score=46.63  Aligned_cols=82  Identities=21%  Similarity=0.275  Sum_probs=49.2

Q ss_pred             CCCEEEEEcC-C--HHHHHHHHHHHHCCCCEEEEEecChhHH----HHHHHcCCCeEEecCC-CcccHHHHHHHHHHHcC
Q 017916          181 PETNVLIMGA-G--PIGLVTMLGARAFGAPRIVIVDVDDYRL----SVAKELGADNIVKVST-NLQDIAEEVEKIQKAMG  252 (364)
Q Consensus       181 ~g~~VLI~Ga-g--~~G~~ai~la~~~g~~~vv~~~~~~~~~----~~~~~lg~~~~~~~~~-~~~~~~~~i~~~~~~~~  252 (364)
                      ++.++||+|+ +  ++|.+.++.+...|++ |+.+.++++..    ++.+++|....+..|- ..++..+.+++..+. -
T Consensus         6 ~~k~~lVTGas~~~GIG~aiA~~la~~Ga~-V~~~~r~~~~~~~~~~~~~~~g~~~~~~~Dv~d~~~v~~~~~~~~~~-~   83 (271)
T PRK06505          6 QGKRGLIMGVANDHSIAWGIAKQLAAQGAE-LAFTYQGEALGKRVKPLAESLGSDFVLPCDVEDIASVDAVFEALEKK-W   83 (271)
T ss_pred             CCCEEEEeCCCCCCcHHHHHHHHHHhCCCE-EEEecCchHHHHHHHHHHHhcCCceEEeCCCCCHHHHHHHHHHHHHH-h
Confidence            4678999998 4  8999999999999995 55555544222    2223445332222222 223344444443332 2


Q ss_pred             CCccEEEECCCC
Q 017916          253 TGIDVSFDCAGF  264 (364)
Q Consensus       253 ~~~d~vid~~g~  264 (364)
                      +.+|++|+++|.
T Consensus        84 g~iD~lVnnAG~   95 (271)
T PRK06505         84 GKLDFVVHAIGF   95 (271)
T ss_pred             CCCCEEEECCcc
Confidence            479999998873

>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase

Probab=95.85  E-value=0.14  Score=44.81  Aligned_cols=82  Identities=21%  Similarity=0.229  Sum_probs=49.4

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChh--HHHHHHHcCCC-eEEecCC-CcccHHHHHHHHHHHcCCCc
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDY--RLSVAKELGAD-NIVKVST-NLQDIAEEVEKIQKAMGTGI  255 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~--~~~~~~~lg~~-~~~~~~~-~~~~~~~~i~~~~~~~~~~~  255 (364)
                      .+.++||+|+ |.+|.+.+..+...|+ .|+.++++..  ..+.+++++.. ..+..+- ..+++.+.++...+. .+++
T Consensus         4 ~~k~vlItGas~gIG~~ia~~l~~~G~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~~~   81 (248)
T TIGR01832         4 EGKVALVTGANTGLGQGIAVGLAEAGA-DIVGAGRSEPSETQQQVEALGRRFLSLTADLSDIEAIKALVDSAVEE-FGHI   81 (248)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCchHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHH-cCCC
Confidence            4789999998 9999999999988999 5666655442  12333444432 2222222 123333333333322 2479


Q ss_pred             cEEEECCCC
Q 017916          256 DVSFDCAGF  264 (364)
Q Consensus       256 d~vid~~g~  264 (364)
                      |++|+++|.
T Consensus        82 d~li~~ag~   90 (248)
T TIGR01832        82 DILVNNAGI   90 (248)
T ss_pred             CEEEECCCC
Confidence            999998874

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.

>PRK08317 hypothetical protein; Provisional

Probab=95.83  E-value=0.16  Score=43.99  Aligned_cols=104  Identities=24%  Similarity=0.294  Sum_probs=68.0

Q ss_pred             HHHcCCCCCCEEEEEcCCHHHHHHHHHHHHCC-CCEEEEEecChhHHHHHHHc--CCCeEEecCCCcccHHHHHHHHHHH
Q 017916          174 CRRANIGPETNVLIMGAGPIGLVTMLGARAFG-APRIVIVDVDDYRLSVAKEL--GADNIVKVSTNLQDIAEEVEKIQKA  250 (364)
Q Consensus       174 l~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g-~~~vv~~~~~~~~~~~~~~l--g~~~~~~~~~~~~~~~~~i~~~~~~  250 (364)
                      ++...+.++++||..|+|. |..+..+++..+ ...+++++.++...+.+++.  .....+.+..  .+..+    . ..
T Consensus        12 ~~~~~~~~~~~vLdiG~G~-G~~~~~~a~~~~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~--~d~~~----~-~~   83 (241)
T PRK08317         12 FELLAVQPGDRVLDVGCGP-GNDARELARRVGPEGRVVGIDRSEAMLALAKERAAGLGPNVEFVR--GDADG----L-PF   83 (241)
T ss_pred             HHHcCCCCCCEEEEeCCCC-CHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHhhCCCCceEEEe--ccccc----C-CC
Confidence            3567888999999999865 788889998874 34799999998888877664  1111111100  01000    0 00


Q ss_pred             cCCCccEEEECC------CCHHHHHHHHHhcccCCEEEEEc
Q 017916          251 MGTGIDVSFDCA------GFNKTMSTALSATRAGGKVCLVG  285 (364)
Q Consensus       251 ~~~~~d~vid~~------g~~~~~~~~~~~l~~~G~~v~~g  285 (364)
                      ....+|+|+...      .....+..+.++|+++|.++...
T Consensus        84 ~~~~~D~v~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~  124 (241)
T PRK08317         84 PDGSFDAVRSDRVLQHLEDPARALAEIARVLRPGGRVVVLD  124 (241)
T ss_pred             CCCCceEEEEechhhccCCHHHHHHHHHHHhcCCcEEEEEe
Confidence            135689887532      22457788999999999998765

>PRK06500 short chain dehydrogenase; Provisional

Probab=95.80  E-value=0.099  Score=45.64  Aligned_cols=82  Identities=27%  Similarity=0.330  Sum_probs=50.9

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHH-HHHHcCCCe-EEecCCC-cccHHHHHHHHHHHcCCCcc
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLS-VAKELGADN-IVKVSTN-LQDIAEEVEKIQKAMGTGID  256 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~-~~~~lg~~~-~~~~~~~-~~~~~~~i~~~~~~~~~~~d  256 (364)
                      ++.++||+|+ |.+|...++.+...|+ .++.++++.++.+ ..++++... .+..+-. ..+..+....+.+. .+++|
T Consensus         5 ~~k~vlItGasg~iG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~~id   82 (249)
T PRK06500          5 QGKTALITGGTSGIGLETARQFLAEGA-RVAITGRDPASLEAARAELGESALVIRADAGDVAAQKALAQALAEA-FGRLD   82 (249)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEecCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHH-hCCCC
Confidence            4679999998 9999999999999999 5677766665543 334555432 2222211 12222222323222 35799


Q ss_pred             EEEECCCC
Q 017916          257 VSFDCAGF  264 (364)
Q Consensus       257 ~vid~~g~  264 (364)
                      ++|.++|.
T Consensus        83 ~vi~~ag~   90 (249)
T PRK06500         83 AVFINAGV   90 (249)
T ss_pred             EEEECCCC
Confidence            99998873

>PRK06128 oxidoreductase; Provisional

Probab=95.80  E-value=0.3  Score=44.24  Aligned_cols=103  Identities=20%  Similarity=0.218  Sum_probs=59.6

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChh--H----HHHHHHcCCCe-EEecCC-CcccHHHHHHHHHHHc
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDY--R----LSVAKELGADN-IVKVST-NLQDIAEEVEKIQKAM  251 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~--~----~~~~~~lg~~~-~~~~~~-~~~~~~~~i~~~~~~~  251 (364)
                      .+.++||+|+ +.+|.+.+..+...|++ |+.+..+.+  +    .+.++..+... .+..+- ..+++.+.+.++.+. 
T Consensus        54 ~~k~vlITGas~gIG~~~a~~l~~~G~~-V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~-  131 (300)
T PRK06128         54 QGRKALITGADSGIGRATAIAFAREGAD-IALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLKDEAFCRQLVERAVKE-  131 (300)
T ss_pred             CCCEEEEecCCCcHHHHHHHHHHHcCCE-EEEEeCCcchHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHHHHHH-
Confidence            4679999998 99999999999889995 444433221  1    12233344322 222221 123333334333332 


Q ss_pred             CCCccEEEECCCCH--------------------------HHHHHHHHhcccCCEEEEEc
Q 017916          252 GTGIDVSFDCAGFN--------------------------KTMSTALSATRAGGKVCLVG  285 (364)
Q Consensus       252 ~~~~d~vid~~g~~--------------------------~~~~~~~~~l~~~G~~v~~g  285 (364)
                      -+++|++|.++|..                          ...+.++..+.++|+++.++
T Consensus       132 ~g~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~~s  191 (300)
T PRK06128        132 LGGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPPGASIINTG  191 (300)
T ss_pred             hCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCcCCEEEEEC
Confidence            24799999988731                          12334455566778988876

>PRK00312 pcm protein-L-isoaspartate O-methyltransferase; Reviewed

Probab=95.77  E-value=0.21  Score=42.67  Aligned_cols=101  Identities=20%  Similarity=0.155  Sum_probs=63.2

Q ss_pred             HHHHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHH----HcCCCeEEecCCCcccHHHHHHHHH
Q 017916          173 ACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAK----ELGADNIVKVSTNLQDIAEEVEKIQ  248 (364)
Q Consensus       173 ~l~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~----~lg~~~~~~~~~~~~~~~~~i~~~~  248 (364)
                      .++..+++++++||-.|+|. |..+..+++..+  .+++++.+++..+.++    +++...+.....   +..+.   +.
T Consensus        70 l~~~l~~~~~~~VLeiG~Gs-G~~t~~la~~~~--~v~~vd~~~~~~~~a~~~~~~~~~~~v~~~~~---d~~~~---~~  140 (212)
T PRK00312         70 MTELLELKPGDRVLEIGTGS-GYQAAVLAHLVR--RVFSVERIKTLQWEAKRRLKQLGLHNVSVRHG---DGWKG---WP  140 (212)
T ss_pred             HHHhcCCCCCCEEEEECCCc-cHHHHHHHHHhC--EEEEEeCCHHHHHHHHHHHHHCCCCceEEEEC---CcccC---CC
Confidence            34567888999999998754 555556666543  6899998877665554    345433211111   11110   10


Q ss_pred             HHcCCCccEEEECCCCHHHHHHHHHhcccCCEEEEE
Q 017916          249 KAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLV  284 (364)
Q Consensus       249 ~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~  284 (364)
                        ..+.+|+|+...........+.+.|+++|+++..
T Consensus       141 --~~~~fD~I~~~~~~~~~~~~l~~~L~~gG~lv~~  174 (212)
T PRK00312        141 --AYAPFDRILVTAAAPEIPRALLEQLKEGGILVAP  174 (212)
T ss_pred             --cCCCcCEEEEccCchhhhHHHHHhcCCCcEEEEE
Confidence              1257999886555456667889999999998865

>cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2

Probab=95.76  E-value=0.24  Score=42.90  Aligned_cols=92  Identities=24%  Similarity=0.260  Sum_probs=60.3

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHCCCC--EEEEEecC----hhH--------HHHHHHcCCCeEEecCCCcccHHHHHH
Q 017916          180 GPETNVLIMGAGPIGLVTMLGARAFGAP--RIVIVDVD----DYR--------LSVAKELGADNIVKVSTNLQDIAEEVE  245 (364)
Q Consensus       180 ~~g~~VLI~Gag~~G~~ai~la~~~g~~--~vv~~~~~----~~~--------~~~~~~lg~~~~~~~~~~~~~~~~~i~  245 (364)
                      -.+.+|+|.|+|..|..++..+...|.+  .++.++++    .+|        .++++.++...      ...++.+.+ 
T Consensus        23 l~~~rvlvlGAGgAg~aiA~~L~~~G~~~~~i~ivdr~gl~~~~r~~~L~~~~~~la~~~~~~~------~~~~l~~~l-   95 (226)
T cd05311          23 IEEVKIVINGAGAAGIAIARLLLAAGAKPENIVVVDSKGVIYEGREDDLNPDKNEIAKETNPEK------TGGTLKEAL-   95 (226)
T ss_pred             ccCCEEEEECchHHHHHHHHHHHHcCcCcceEEEEeCCCccccccchhhhHHHHHHHHHhccCc------ccCCHHHHH-
Confidence            4568999999999999999999899998  89999887    333        33445443211      001222222 


Q ss_pred             HHHHHcCCCccEEEECCCCHHHHHHHHHhcccCCEEEEEc
Q 017916          246 KIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVG  285 (364)
Q Consensus       246 ~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g  285 (364)
                             .++|++|++++.+-.-...++.|.+...+..+.
T Consensus        96 -------~~~dvlIgaT~~G~~~~~~l~~m~~~~ivf~ls  128 (226)
T cd05311          96 -------KGADVFIGVSRPGVVKKEMIKKMAKDPIVFALA  128 (226)
T ss_pred             -------hcCCEEEeCCCCCCCCHHHHHhhCCCCEEEEeC
Confidence                   248999999873322236677777776655544

Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph

>PRK06198 short chain dehydrogenase; Provisional

Probab=95.76  E-value=0.12  Score=45.41  Aligned_cols=83  Identities=20%  Similarity=0.278  Sum_probs=51.0

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHH----HHHHcCCCe-EEecCCC-cccHHHHHHHHHHHcCC
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLS----VAKELGADN-IVKVSTN-LQDIAEEVEKIQKAMGT  253 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~----~~~~lg~~~-~~~~~~~-~~~~~~~i~~~~~~~~~  253 (364)
                      ++.+++|+|+ |.+|...++.+...|++.|+.++++.++..    .++..+... .+..+-. .+++.+.+....... +
T Consensus         5 ~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-g   83 (260)
T PRK06198          5 DGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQADLSDVEDCRRVVAAADEAF-G   83 (260)
T ss_pred             CCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHh-C
Confidence            5678999998 999999999999999965777777655433    223334321 1222222 223333333332222 4


Q ss_pred             CccEEEECCCC
Q 017916          254 GIDVSFDCAGF  264 (364)
Q Consensus       254 ~~d~vid~~g~  264 (364)
                      ++|++|++.|.
T Consensus        84 ~id~li~~ag~   94 (260)
T PRK06198         84 RLDALVNAAGL   94 (260)
T ss_pred             CCCEEEECCCc
Confidence            69999999874

>PRK07832 short chain dehydrogenase; Provisional

Probab=95.75  E-value=0.31  Score=43.30  Aligned_cols=78  Identities=28%  Similarity=0.402  Sum_probs=46.9

Q ss_pred             EEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHH-H---HHcCCCe----EEecCCCcccHHHHHHHHHHHcCCC
Q 017916          184 NVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSV-A---KELGADN----IVKVSTNLQDIAEEVEKIQKAMGTG  254 (364)
Q Consensus       184 ~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~-~---~~lg~~~----~~~~~~~~~~~~~~i~~~~~~~~~~  254 (364)
                      +++|+|+ |++|..+++.+...|++ |+.+.+++++.+. .   +..+...    ..|..+ .++..+...++... .++
T Consensus         2 ~vlItGas~giG~~la~~la~~G~~-vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~-~~~   78 (272)
T PRK07832          2 RCFVTGAASGIGRATALRLAAQGAE-LFLTDRDADGLAQTVADARALGGTVPEHRALDISD-YDAVAAFAADIHAA-HGS   78 (272)
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCC-HHHHHHHHHHHHHh-cCC
Confidence            6899998 99999999999889995 6666666654332 2   2233321    123221 12233323333222 357


Q ss_pred             ccEEEECCCC
Q 017916          255 IDVSFDCAGF  264 (364)
Q Consensus       255 ~d~vid~~g~  264 (364)
                      +|++|+++|.
T Consensus        79 id~lv~~ag~   88 (272)
T PRK07832         79 MDVVMNIAGI   88 (272)
T ss_pred             CCEEEECCCC
Confidence            9999999874

>PRK12829 short chain dehydrogenase; Provisional

Probab=95.75  E-value=0.098  Score=46.14  Aligned_cols=83  Identities=19%  Similarity=0.230  Sum_probs=51.2

Q ss_pred             CCCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHH-HcCCC--eEEecCCC-cccHHHHHHHHHHHcCCC
Q 017916          180 GPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAK-ELGAD--NIVKVSTN-LQDIAEEVEKIQKAMGTG  254 (364)
Q Consensus       180 ~~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~-~lg~~--~~~~~~~~-~~~~~~~i~~~~~~~~~~  254 (364)
                      -++.++||+|+ |.+|..++..+...|++ |+.+.++.+..+.+. .+.-.  ..+..+-. .+++.+.+..+.+. -.+
T Consensus         9 ~~~~~vlItGa~g~iG~~~a~~L~~~g~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~~   86 (264)
T PRK12829          9 LDGLRVLVTGGASGIGRAIAEAFAEAGAR-VHVCDVSEAALAATAARLPGAKVTATVADVADPAQVERVFDTAVER-FGG   86 (264)
T ss_pred             cCCCEEEEeCCCCcHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHHhcCceEEEEccCCCHHHHHHHHHHHHHH-hCC
Confidence            46789999998 99999999999999994 777777665544333 23211  12222221 22233333333322 247


Q ss_pred             ccEEEECCCC
Q 017916          255 IDVSFDCAGF  264 (364)
Q Consensus       255 ~d~vid~~g~  264 (364)
                      +|++|.++|.
T Consensus        87 ~d~vi~~ag~   96 (264)
T PRK12829         87 LDVLVNNAGI   96 (264)
T ss_pred             CCEEEECCCC
Confidence            9999998874

>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases

Probab=95.74  E-value=0.057  Score=43.97  Aligned_cols=80  Identities=23%  Similarity=0.312  Sum_probs=50.4

Q ss_pred             EEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecC--hhHHH-HHHH---cCCC-eEEecC-CCcccHHHHHHHHHHHcCCC
Q 017916          184 NVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVD--DYRLS-VAKE---LGAD-NIVKVS-TNLQDIAEEVEKIQKAMGTG  254 (364)
Q Consensus       184 ~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~--~~~~~-~~~~---lg~~-~~~~~~-~~~~~~~~~i~~~~~~~~~~  254 (364)
                      ++||+|+ +++|.+.++.+...|..+++.+.++  .++.. +..+   .+.. ..+..| ...+++.+.+..+.. ....
T Consensus         2 ~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~-~~~~   80 (167)
T PF00106_consen    2 TVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLSDPESIRALIEEVIK-RFGP   80 (167)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHHHHH-HHSS
T ss_pred             EEEEECCCCHHHHHHHHHHHhcCceEEEEeeeccccccccccccccccccccccccccccccccccccccccccc-cccc
Confidence            6899998 9999999888888888788888877  33333 3233   3421 122222 222444444444442 2457


Q ss_pred             ccEEEECCCC
Q 017916          255 IDVSFDCAGF  264 (364)
Q Consensus       255 ~d~vid~~g~  264 (364)
                      +|++|.+.|.
T Consensus        81 ld~li~~ag~   90 (167)
T PF00106_consen   81 LDILINNAGI   90 (167)
T ss_dssp             ESEEEEECSC
T ss_pred             cccccccccc
Confidence            9999998874

As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....

>PRK08862 short chain dehydrogenase; Provisional

Probab=95.73  E-value=0.12  Score=44.70  Aligned_cols=82  Identities=17%  Similarity=0.214  Sum_probs=51.1

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHH----HHHcCCCe-EEecC-CCcccHHHHHHHHHHHcCC
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSV----AKELGADN-IVKVS-TNLQDIAEEVEKIQKAMGT  253 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~----~~~lg~~~-~~~~~-~~~~~~~~~i~~~~~~~~~  253 (364)
                      .|.++||+|+ +++|.+.+..+...|+ .|+.+.++.++.+.    +++.+... .+..+ ...++..+.+.++.+..+.
T Consensus         4 ~~k~~lVtGas~GIG~aia~~la~~G~-~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   82 (227)
T PRK08862          4 KSSIILITSAGSVLGRTISCHFARLGA-TLILCDQDQSALKDTYEQCSALTDNVYSFQLKDFSQESIRHLFDAIEQQFNR   82 (227)
T ss_pred             CCeEEEEECCccHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            4678999998 8999999998888999 46666666665432    22334332 22222 2223344444444443344


Q ss_pred             CccEEEECCC
Q 017916          254 GIDVSFDCAG  263 (364)
Q Consensus       254 ~~d~vid~~g  263 (364)
                      .+|++|+++|
T Consensus        83 ~iD~li~nag   92 (227)
T PRK08862         83 APDVLVNNWT   92 (227)
T ss_pred             CCCEEEECCc
Confidence            7999999986

>PLN02366 spermidine synthase

Probab=95.73  E-value=0.094  Score=47.56  Aligned_cols=100  Identities=24%  Similarity=0.267  Sum_probs=63.6

Q ss_pred             CCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHc-CC------C-eEEecCCCcccHHHHHHHHHHH
Q 017916          179 IGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKEL-GA------D-NIVKVSTNLQDIAEEVEKIQKA  250 (364)
Q Consensus       179 ~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~l-g~------~-~~~~~~~~~~~~~~~i~~~~~~  250 (364)
                      ....++|||.|+|. |.++..+++.-+...+.+++.+++-.+++++. ..      + .+-..   ..|..+.+++.   
T Consensus        89 ~~~pkrVLiIGgG~-G~~~rellk~~~v~~V~~VEiD~~Vi~~ar~~f~~~~~~~~dpRv~vi---~~Da~~~l~~~---  161 (308)
T PLN02366         89 IPNPKKVLVVGGGD-GGVLREIARHSSVEQIDICEIDKMVIDVSKKFFPDLAVGFDDPRVNLH---IGDGVEFLKNA---  161 (308)
T ss_pred             CCCCCeEEEEcCCc-cHHHHHHHhCCCCCeEEEEECCHHHHHHHHHhhhhhccccCCCceEEE---EChHHHHHhhc---
Confidence            35578999998765 55677888877777889999888877877763 21      0 11100   02222222211   


Q ss_pred             cCCCccEEEECCC----------CHHHHHHHHHhcccCCEEEEEc
Q 017916          251 MGTGIDVSFDCAG----------FNKTMSTALSATRAGGKVCLVG  285 (364)
Q Consensus       251 ~~~~~d~vid~~g----------~~~~~~~~~~~l~~~G~~v~~g  285 (364)
                      .++.+|+||--..          +.+.++.+.++|+++|.++.-.
T Consensus       162 ~~~~yDvIi~D~~dp~~~~~~L~t~ef~~~~~~~L~pgGvlv~q~  206 (308)
T PLN02366        162 PEGTYDAIIVDSSDPVGPAQELFEKPFFESVARALRPGGVVCTQA  206 (308)
T ss_pred             cCCCCCEEEEcCCCCCCchhhhhHHHHHHHHHHhcCCCcEEEECc
Confidence            1457999874322          1356788999999999997643

>PRK09186 flagellin modification protein A; Provisional

Probab=95.72  E-value=0.25  Score=43.29  Aligned_cols=81  Identities=23%  Similarity=0.363  Sum_probs=49.5

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHH-HHHHc----CCCe--EEecCC-CcccHHHHHHHHHHHc
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLS-VAKEL----GADN--IVKVST-NLQDIAEEVEKIQKAM  251 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~-~~~~l----g~~~--~~~~~~-~~~~~~~~i~~~~~~~  251 (364)
                      ++.+|||+|+ |.+|...+..+...|+ .++.+.++.++.+ ..+++    +...  .+..+- ..+++.+.+...... 
T Consensus         3 ~~k~vlItGas~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~-   80 (256)
T PRK09186          3 KGKTILITGAGGLIGSALVKAILEAGG-IVIAADIDKEALNELLESLGKEFKSKKLSLVELDITDQESLEEFLSKSAEK-   80 (256)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCCHHHHHHHHHHHHHH-
Confidence            4679999998 9999999999999999 4666666665543 22333    2211  112221 123333444443332 


Q ss_pred             CCCccEEEECCC
Q 017916          252 GTGIDVSFDCAG  263 (364)
Q Consensus       252 ~~~~d~vid~~g  263 (364)
                      -+++|++|.+++
T Consensus        81 ~~~id~vi~~A~   92 (256)
T PRK09186         81 YGKIDGAVNCAY   92 (256)
T ss_pred             cCCccEEEECCc
Confidence            246999999885

>PRK03369 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=95.71  E-value=0.069  Score=51.98  Aligned_cols=73  Identities=27%  Similarity=0.442  Sum_probs=51.9

Q ss_pred             CCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcCCCccEE
Q 017916          179 IGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVS  258 (364)
Q Consensus       179 ~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~v  258 (364)
                      +.+|++|+|+|.|..|++++++++..|+ .|++.+..+.+.+.++++|+... .  .  ....+.+        ..+|+|
T Consensus         9 ~~~~~~v~V~G~G~sG~aa~~~L~~~G~-~v~~~D~~~~~~~~l~~~g~~~~-~--~--~~~~~~l--------~~~D~V   74 (488)
T PRK03369          9 LLPGAPVLVAGAGVTGRAVLAALTRFGA-RPTVCDDDPDALRPHAERGVATV-S--T--SDAVQQI--------ADYALV   74 (488)
T ss_pred             ccCCCeEEEEcCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHhCCCEEE-c--C--cchHhHh--------hcCCEE
Confidence            4678999999999999999999999999 57778876666655677776432 1  1  1111111        357999


Q ss_pred             EECCCCH
Q 017916          259 FDCAGFN  265 (364)
Q Consensus       259 id~~g~~  265 (364)
                      |.+.|.+
T Consensus        75 V~SpGi~   81 (488)
T PRK03369         75 VTSPGFR   81 (488)
T ss_pred             EECCCCC
Confidence            9988864

>PRK06484 short chain dehydrogenase; Validated

Probab=95.70  E-value=0.29  Score=48.03  Aligned_cols=104  Identities=23%  Similarity=0.280  Sum_probs=65.2

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHH-HHcCCCe-EEecCCC-cccHHHHHHHHHHHcCCCcc
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KELGADN-IVKVSTN-LQDIAEEVEKIQKAMGTGID  256 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~-~~lg~~~-~~~~~~~-~~~~~~~i~~~~~~~~~~~d  256 (364)
                      .|.++||+|+ +++|.+.++.+...|+ .|+.++++.++.+.+ ++++... .+..|-. .++..+.+....+. -+.+|
T Consensus       268 ~~k~~lItGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~g~id  345 (520)
T PRK06484        268 SPRVVAITGGARGIGRAVADRFAAAGD-RLLIIDRDAEGAKKLAEALGDEHLSVQADITDEAAVESAFAQIQAR-WGRLD  345 (520)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCceeEEEccCCCHHHHHHHHHHHHHH-cCCCC
Confidence            5788999998 9999999999989999 577777776665544 3455332 1222222 23333334333332 24799


Q ss_pred             EEEECCCCH-----------H---------------HHHHHHHhcccCCEEEEEcC
Q 017916          257 VSFDCAGFN-----------K---------------TMSTALSATRAGGKVCLVGM  286 (364)
Q Consensus       257 ~vid~~g~~-----------~---------------~~~~~~~~l~~~G~~v~~g~  286 (364)
                      ++|.++|..           +               ..+.++..++.+|+++.++.
T Consensus       346 ~li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~iv~isS  401 (520)
T PRK06484        346 VLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQGGVIVNLGS  401 (520)
T ss_pred             EEEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhccCCEEEEECc
Confidence            999988731           0               13344556666789988863

>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase

Probab=95.70  E-value=0.12  Score=41.61  Aligned_cols=101  Identities=24%  Similarity=0.285  Sum_probs=60.9

Q ss_pred             HHHcCC-CCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHH-HHHHcCCCe-EEecCCCcccHHHHHHHHHHH
Q 017916          174 CRRANI-GPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLS-VAKELGADN-IVKVSTNLQDIAEEVEKIQKA  250 (364)
Q Consensus       174 l~~~~~-~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~-~~~~lg~~~-~~~~~~~~~~~~~~i~~~~~~  250 (364)
                      +++..+ ..+.+++|.|+|.+|...++.+...|...+.+++++.++.+ +.++++... ...+    .+..+    .   
T Consensus        10 ~~~~~~~~~~~~i~iiG~G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~~~~~~~----~~~~~----~---   78 (155)
T cd01065          10 LEEAGIELKGKKVLILGAGGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGELGIAIAY----LDLEE----L---   78 (155)
T ss_pred             HHhhCCCCCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhcccceee----cchhh----c---
Confidence            344333 45789999999999999998888887546788877776654 455555421 0111    11111    1   


Q ss_pred             cCCCccEEEECCCCHHH----HHHHHHhcccCCEEEEEcC
Q 017916          251 MGTGIDVSFDCAGFNKT----MSTALSATRAGGKVCLVGM  286 (364)
Q Consensus       251 ~~~~~d~vid~~g~~~~----~~~~~~~l~~~G~~v~~g~  286 (364)
                       -.++|++|.|+.....    .......++++..++.++.
T Consensus        79 -~~~~Dvvi~~~~~~~~~~~~~~~~~~~~~~~~~v~D~~~  117 (155)
T cd01065          79 -LAEADLIINTTPVGMKPGDELPLPPSLLKPGGVVYDVVY  117 (155)
T ss_pred             -cccCCEEEeCcCCCCCCCCCCCCCHHHcCCCCEEEEcCc
Confidence             2578999999885332    1112234566666666653

Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann

>PRK05867 short chain dehydrogenase; Provisional

Probab=95.70  E-value=0.13  Score=45.23  Aligned_cols=82  Identities=24%  Similarity=0.310  Sum_probs=50.4

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHH-HHc---CCC-eEEecCC-CcccHHHHHHHHHHHcCC
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KEL---GAD-NIVKVST-NLQDIAEEVEKIQKAMGT  253 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~-~~l---g~~-~~~~~~~-~~~~~~~~i~~~~~~~~~  253 (364)
                      .+.++||+|+ +++|.+.++.+...|+ .|+.+.++.++.+.+ .++   +.. ..+..+- ..+++.+.++.+.+.. +
T Consensus         8 ~~k~vlVtGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-g   85 (253)
T PRK05867          8 HGKRALITGASTGIGKRVALAYVEAGA-QVAIAARHLDALEKLADEIGTSGGKVVPVCCDVSQHQQVTSMLDQVTAEL-G   85 (253)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHh-C
Confidence            4789999998 9999999999999999 566666666554332 222   322 1222221 2233334444433322 4


Q ss_pred             CccEEEECCCC
Q 017916          254 GIDVSFDCAGF  264 (364)
Q Consensus       254 ~~d~vid~~g~  264 (364)
                      ++|++|.+.|.
T Consensus        86 ~id~lv~~ag~   96 (253)
T PRK05867         86 GIDIAVCNAGI   96 (253)
T ss_pred             CCCEEEECCCC
Confidence            79999998873

>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional

Probab=95.70  E-value=0.13  Score=45.54  Aligned_cols=81  Identities=16%  Similarity=0.197  Sum_probs=47.3

Q ss_pred             CCCEEEEEcC-C--HHHHHHHHHHHHCCCCEEEEEecChhHHHHH----HHcCCCeEEecCC-CcccHHHHHHHHHHHcC
Q 017916          181 PETNVLIMGA-G--PIGLVTMLGARAFGAPRIVIVDVDDYRLSVA----KELGADNIVKVST-NLQDIAEEVEKIQKAMG  252 (364)
Q Consensus       181 ~g~~VLI~Ga-g--~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~----~~lg~~~~~~~~~-~~~~~~~~i~~~~~~~~  252 (364)
                      .|.++||+|+ +  ++|.+.++.+...|++ |+.+.++++..+.+    ++++....+..|- ..++..+.++...+. -
T Consensus         7 ~~k~~lITGas~~~GIG~a~a~~la~~G~~-v~~~~r~~~~~~~~~~l~~~~g~~~~~~~Dv~~~~~v~~~~~~~~~~-~   84 (260)
T PRK06603          7 QGKKGLITGIANNMSISWAIAQLAKKHGAE-LWFTYQSEVLEKRVKPLAEEIGCNFVSELDVTNPKSISNLFDDIKEK-W   84 (260)
T ss_pred             CCcEEEEECCCCCcchHHHHHHHHHHcCCE-EEEEeCchHHHHHHHHHHHhcCCceEEEccCCCHHHHHHHHHHHHHH-c
Confidence            4678999998 4  7999998888888995 55555553222222    2334332222222 223444444443332 2


Q ss_pred             CCccEEEECCC
Q 017916          253 TGIDVSFDCAG  263 (364)
Q Consensus       253 ~~~d~vid~~g  263 (364)
                      +++|++++++|
T Consensus        85 g~iDilVnnag   95 (260)
T PRK06603         85 GSFDFLLHGMA   95 (260)
T ss_pred             CCccEEEEccc
Confidence            47999999876

>COG2264 PrmA Ribosomal protein L11 methylase [Translation, ribosomal structure and biogenesis]

Probab=95.69  E-value=0.13  Score=45.93  Aligned_cols=98  Identities=22%  Similarity=0.331  Sum_probs=58.8

Q ss_pred             CCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHH----cCCCeEEecCCCcccHHHHHHHHHHHcCCC
Q 017916          179 IGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKE----LGADNIVKVSTNLQDIAEEVEKIQKAMGTG  254 (364)
Q Consensus       179 ~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~  254 (364)
                      +++|.+||=.|.|+ |..+|. |..+|++.+++++.++...+.+++    -+......  ...-...      ....++.
T Consensus       160 ~~~g~~vlDvGcGS-GILaIA-a~kLGA~~v~g~DiDp~AV~aa~eNa~~N~v~~~~~--~~~~~~~------~~~~~~~  229 (300)
T COG2264         160 LKKGKTVLDVGCGS-GILAIA-AAKLGAKKVVGVDIDPQAVEAARENARLNGVELLVQ--AKGFLLL------EVPENGP  229 (300)
T ss_pred             hcCCCEEEEecCCh-hHHHHH-HHHcCCceEEEecCCHHHHHHHHHHHHHcCCchhhh--cccccch------hhcccCc
Confidence            46899999998743 444433 345789899999988865554443    33331000  0000000      0111468


Q ss_pred             ccEEEECCCCH---HHHHHHHHhcccCCEEEEEcC
Q 017916          255 IDVSFDCAGFN---KTMSTALSATRAGGKVCLVGM  286 (364)
Q Consensus       255 ~d~vid~~g~~---~~~~~~~~~l~~~G~~v~~g~  286 (364)
                      +|+|+-.+=..   .......++++|+|++++.|.
T Consensus       230 ~DvIVANILA~vl~~La~~~~~~lkpgg~lIlSGI  264 (300)
T COG2264         230 FDVIVANILAEVLVELAPDIKRLLKPGGRLILSGI  264 (300)
T ss_pred             ccEEEehhhHHHHHHHHHHHHHHcCCCceEEEEee
Confidence            99998755321   344567789999999999873

>PRK06180 short chain dehydrogenase; Provisional

Probab=95.66  E-value=0.15  Score=45.55  Aligned_cols=82  Identities=22%  Similarity=0.186  Sum_probs=50.9

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCC--eEEecCC-CcccHHHHHHHHHHHcCCCcc
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGAD--NIVKVST-NLQDIAEEVEKIQKAMGTGID  256 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~--~~~~~~~-~~~~~~~~i~~~~~~~~~~~d  256 (364)
                      .+.++||+|+ |.+|.+.++.+...|+ .|++++++.++.+.+......  ..+..+- ..+++.+.++...+. -+++|
T Consensus         3 ~~~~vlVtGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~-~~~~d   80 (277)
T PRK06180          3 SMKTWLITGVSSGFGRALAQAALAAGH-RVVGTVRSEAARADFEALHPDRALARLLDVTDFDAIDAVVADAEAT-FGPID   80 (277)
T ss_pred             CCCEEEEecCCChHHHHHHHHHHhCcC-EEEEEeCCHHHHHHHHhhcCCCeeEEEccCCCHHHHHHHHHHHHHH-hCCCC
Confidence            3578999998 9999999999888999 577777777766554443211  1222221 122333333333222 24699


Q ss_pred             EEEECCCC
Q 017916          257 VSFDCAGF  264 (364)
Q Consensus       257 ~vid~~g~  264 (364)
                      ++|.++|.
T Consensus        81 ~vv~~ag~   88 (277)
T PRK06180         81 VLVNNAGY   88 (277)
T ss_pred             EEEECCCc
Confidence            99999884

>PRK07062 short chain dehydrogenase; Provisional

Probab=95.66  E-value=0.13  Score=45.52  Aligned_cols=82  Identities=23%  Similarity=0.309  Sum_probs=49.8

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHH-HHc----CCCeE--EecCC-CcccHHHHHHHHHHHc
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KEL----GADNI--VKVST-NLQDIAEEVEKIQKAM  251 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~-~~l----g~~~~--~~~~~-~~~~~~~~i~~~~~~~  251 (364)
                      .+.++||+|+ +.+|.+.++.+...|++ |+.+.+++++.+.. +++    +...+  +..+- ..++..+.+..+.+. 
T Consensus         7 ~~k~~lItGas~giG~~ia~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~-   84 (265)
T PRK07062          7 EGRVAVVTGGSSGIGLATVELLLEAGAS-VAICGRDEERLASAEARLREKFPGARLLAARCDVLDEADVAAFAAAVEAR-   84 (265)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCe-EEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHHHHHHHHHHHHHh-
Confidence            4679999998 99999999999999994 66777776654432 222    11121  21121 122333333333322 


Q ss_pred             CCCccEEEECCCC
Q 017916          252 GTGIDVSFDCAGF  264 (364)
Q Consensus       252 ~~~~d~vid~~g~  264 (364)
                      -+++|++|+++|.
T Consensus        85 ~g~id~li~~Ag~   97 (265)
T PRK07062         85 FGGVDMLVNNAGQ   97 (265)
T ss_pred             cCCCCEEEECCCC
Confidence            2469999999873

>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3

Probab=95.66  E-value=0.19  Score=40.67  Aligned_cols=92  Identities=18%  Similarity=0.286  Sum_probs=59.3

Q ss_pred             CCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcCCCccE
Q 017916          178 NIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDV  257 (364)
Q Consensus       178 ~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~  257 (364)
                      ..-.|.+++|.|=|.+|.-.++.++.+|+ .|++++.++-+.-.+..-|... ..           +.+.    -...|+
T Consensus        19 ~~l~Gk~vvV~GYG~vG~g~A~~lr~~Ga-~V~V~e~DPi~alqA~~dGf~v-~~-----------~~~a----~~~adi   81 (162)
T PF00670_consen   19 LMLAGKRVVVIGYGKVGKGIARALRGLGA-RVTVTEIDPIRALQAAMDGFEV-MT-----------LEEA----LRDADI   81 (162)
T ss_dssp             S--TTSEEEEE--SHHHHHHHHHHHHTT--EEEEE-SSHHHHHHHHHTT-EE-E------------HHHH----TTT-SE
T ss_pred             eeeCCCEEEEeCCCcccHHHHHHHhhCCC-EEEEEECChHHHHHhhhcCcEe-cC-----------HHHH----HhhCCE
Confidence            35688999999999999999999999999 7899988887765555545432 11           2222    246799


Q ss_pred             EEECCCCHHH-HHHHHHhcccCCEEEEEcC
Q 017916          258 SFDCAGFNKT-MSTALSATRAGGKVCLVGM  286 (364)
Q Consensus       258 vid~~g~~~~-~~~~~~~l~~~G~~v~~g~  286 (364)
                      +|.++|..+. ..+-++.|+++..+...|.
T Consensus        82 ~vtaTG~~~vi~~e~~~~mkdgail~n~Gh  111 (162)
T PF00670_consen   82 FVTATGNKDVITGEHFRQMKDGAILANAGH  111 (162)
T ss_dssp             EEE-SSSSSSB-HHHHHHS-TTEEEEESSS
T ss_pred             EEECCCCccccCHHHHHHhcCCeEEeccCc
Confidence            9999997553 3467788987777666653

3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....

>PRK13940 glutamyl-tRNA reductase; Provisional

Probab=95.65  E-value=0.12  Score=48.91  Aligned_cols=76  Identities=16%  Similarity=0.225  Sum_probs=53.7

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHH-HHHHcCCCeEEecCCCcccHHHHHHHHHHHcCCCccEE
Q 017916          180 GPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLS-VAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVS  258 (364)
Q Consensus       180 ~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~-~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~v  258 (364)
                      -.+.+|||.|+|..|.+++..+...|++.+.++.++.+|.+ ++.+++-..++.+       . .+...    -..+|+|
T Consensus       179 l~~kkvlviGaG~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~~~~~~~~~-------~-~l~~~----l~~aDiV  246 (414)
T PRK13940        179 ISSKNVLIIGAGQTGELLFRHVTALAPKQIMLANRTIEKAQKITSAFRNASAHYL-------S-ELPQL----IKKADII  246 (414)
T ss_pred             ccCCEEEEEcCcHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHhcCCeEecH-------H-HHHHH----hccCCEE
Confidence            45789999999999999999999999888888888877654 4455652222222       1 12111    1468999


Q ss_pred             EECCCCHHH
Q 017916          259 FDCAGFNKT  267 (364)
Q Consensus       259 id~~g~~~~  267 (364)
                      |+|++++..
T Consensus       247 I~aT~a~~~  255 (414)
T PRK13940        247 IAAVNVLEY  255 (414)
T ss_pred             EECcCCCCe
Confidence            999997643

>PRK12937 short chain dehydrogenase; Provisional

Probab=95.63  E-value=0.34  Score=42.11  Aligned_cols=105  Identities=17%  Similarity=0.166  Sum_probs=59.4

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHH-H---HHHcCCC-eEEecCC-CcccHHHHHHHHHHHcCC
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLS-V---AKELGAD-NIVKVST-NLQDIAEEVEKIQKAMGT  253 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~-~---~~~lg~~-~~~~~~~-~~~~~~~~i~~~~~~~~~  253 (364)
                      ++.++||+|+ |.+|...++.+...|+++++...+++.+.+ .   ++..+.. ..+..+- ..+++.+.++.+... -+
T Consensus         4 ~~~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-~~   82 (245)
T PRK12937          4 SNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAAGGRAIAVQADVADAAAVTRLFDAAETA-FG   82 (245)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHH-cC
Confidence            4678999998 999999999999999954443333332222 2   2223322 1222221 123333333333322 24


Q ss_pred             CccEEEECCCCH----------H---------------HHHHHHHhcccCCEEEEEcC
Q 017916          254 GIDVSFDCAGFN----------K---------------TMSTALSATRAGGKVCLVGM  286 (364)
Q Consensus       254 ~~d~vid~~g~~----------~---------------~~~~~~~~l~~~G~~v~~g~  286 (364)
                      ++|++|.++|..          +               ..+.+++.++..|+++.++.
T Consensus        83 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss  140 (245)
T PRK12937         83 RIDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQGGRIINLST  140 (245)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhccCcEEEEEee
Confidence            799999988731          1               12344455566788888763

>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase

Probab=95.61  E-value=0.1  Score=49.23  Aligned_cols=93  Identities=24%  Similarity=0.313  Sum_probs=57.5

Q ss_pred             EEEEcCCHHHHHHHHHHHHCCCC-EEEEEecChhHHHHHHH--cCCC-eEEecCCCcccHHHHHHHHHHHcCCCccEEEE
Q 017916          185 VLIMGAGPIGLVTMLGARAFGAP-RIVIVDVDDYRLSVAKE--LGAD-NIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  260 (364)
Q Consensus       185 VLI~Gag~~G~~ai~la~~~g~~-~vv~~~~~~~~~~~~~~--lg~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid  260 (364)
                      |+|.|+|.+|..+++.+...+-. .+++.+++.++.+.+.+  .+.. .....+-  .+.. .++++.    .+.|+||+
T Consensus         1 IlvlG~G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~~~~~~~~~~~d~--~~~~-~l~~~~----~~~dvVin   73 (386)
T PF03435_consen    1 ILVLGAGRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKLLGDRVEAVQVDV--NDPE-SLAELL----RGCDVVIN   73 (386)
T ss_dssp             EEEE--SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT--TTTTEEEEE--T--TTHH-HHHHHH----TTSSEEEE
T ss_pred             CEEEcCcHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhccccceeEEEEec--CCHH-HHHHHH----hcCCEEEE
Confidence            68899999999999999877643 68888888888665543  2221 1222222  1222 244443    45699999


Q ss_pred             CCCCHHHHHHHHHhcccCCEEEEE
Q 017916          261 CAGFNKTMSTALSATRAGGKVCLV  284 (364)
Q Consensus       261 ~~g~~~~~~~~~~~l~~~G~~v~~  284 (364)
                      |+|.......+-.|+..+-++++.
T Consensus        74 ~~gp~~~~~v~~~~i~~g~~yvD~   97 (386)
T PF03435_consen   74 CAGPFFGEPVARACIEAGVHYVDT   97 (386)
T ss_dssp             -SSGGGHHHHHHHHHHHT-EEEES
T ss_pred             CCccchhHHHHHHHHHhCCCeecc
Confidence            999554555666677778888873

Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.

>PRK04266 fibrillarin; Provisional

Probab=95.61  E-value=0.33  Score=41.98  Aligned_cols=104  Identities=15%  Similarity=0.191  Sum_probs=61.8

Q ss_pred             HHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHc-C-CCeEEecCCCcccHHHHHHHHHHHcC
Q 017916          175 RRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKEL-G-ADNIVKVSTNLQDIAEEVEKIQKAMG  252 (364)
Q Consensus       175 ~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~l-g-~~~~~~~~~~~~~~~~~i~~~~~~~~  252 (364)
                      +...+++|++||=.|+|. |..+..+++..+...|++++.+++..+.+.+. . ...+..+.....+.. ....+    .
T Consensus        66 ~~l~i~~g~~VlD~G~G~-G~~~~~la~~v~~g~V~avD~~~~ml~~l~~~a~~~~nv~~i~~D~~~~~-~~~~l----~  139 (226)
T PRK04266         66 KNFPIKKGSKVLYLGAAS-GTTVSHVSDIVEEGVVYAVEFAPRPMRELLEVAEERKNIIPILADARKPE-RYAHV----V  139 (226)
T ss_pred             hhCCCCCCCEEEEEccCC-CHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhhcCCcEEEECCCCCcc-hhhhc----c
Confidence            457889999999988644 44566677776534799999998766644322 1 111111111111100 00011    2


Q ss_pred             CCccEEEECCCCHH----HHHHHHHhcccCCEEEEE
Q 017916          253 TGIDVSFDCAGFNK----TMSTALSATRAGGKVCLV  284 (364)
Q Consensus       253 ~~~d~vid~~g~~~----~~~~~~~~l~~~G~~v~~  284 (364)
                      ..+|+++.....++    .+..+.+.|+|+|+++..
T Consensus       140 ~~~D~i~~d~~~p~~~~~~L~~~~r~LKpGG~lvI~  175 (226)
T PRK04266        140 EKVDVIYQDVAQPNQAEIAIDNAEFFLKDGGYLLLA  175 (226)
T ss_pred             ccCCEEEECCCChhHHHHHHHHHHHhcCCCcEEEEE
Confidence            35999985444332    367888999999999873

>PRK08267 short chain dehydrogenase; Provisional

Probab=95.60  E-value=0.13  Score=45.29  Aligned_cols=81  Identities=27%  Similarity=0.353  Sum_probs=50.2

Q ss_pred             CEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHH-HHcC-CC-eEEecCC-CcccHHHHHHHHHHHcCCCccE
Q 017916          183 TNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KELG-AD-NIVKVST-NLQDIAEEVEKIQKAMGTGIDV  257 (364)
Q Consensus       183 ~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~-~~lg-~~-~~~~~~~-~~~~~~~~i~~~~~~~~~~~d~  257 (364)
                      .++||+|+ |.+|...++.+...|+ .|+.++++.++.+.+ +.++ .. .++..|- ...++.+.++.+.....+++|+
T Consensus         2 k~vlItGasg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~~id~   80 (260)
T PRK08267          2 KSIFITGAASGIGRATALLFAAEGW-RVGAYDINEAGLAALAAELGAGNAWTGALDVTDRAAWDAALADFAAATGGRLDV   80 (260)
T ss_pred             cEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCCE
Confidence            47899998 9999999998888999 567777777665544 3333 11 1222221 1233333344333221457999


Q ss_pred             EEECCCC
Q 017916          258 SFDCAGF  264 (364)
Q Consensus       258 vid~~g~  264 (364)
                      +|.++|.
T Consensus        81 vi~~ag~   87 (260)
T PRK08267         81 LFNNAGI   87 (260)
T ss_pred             EEECCCC
Confidence            9999874

>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=95.60  E-value=0.15  Score=44.50  Aligned_cols=82  Identities=20%  Similarity=0.184  Sum_probs=50.8

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHH-HHcC--CC-eEEecCC-CcccHHHHHHHHHHHcCCC
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KELG--AD-NIVKVST-NLQDIAEEVEKIQKAMGTG  254 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~-~~lg--~~-~~~~~~~-~~~~~~~~i~~~~~~~~~~  254 (364)
                      .+.++||+|+ |.+|...++.+...|++ |++++++.++.+.+ ..+.  .. ..+..+- ...++.+.++..... ..+
T Consensus         4 ~~~~vlItGasg~iG~~l~~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~~   81 (251)
T PRK07231          4 EGKVAIVTGASSGIGEGIARRFAAEGAR-VVVTDRNEEAAERVAAEILAGGRAIAVAADVSDEADVEAAVAAALER-FGS   81 (251)
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHH-hCC
Confidence            4578999998 99999999998888995 77777777655433 3332  11 1222221 223333333333222 247


Q ss_pred             ccEEEECCCC
Q 017916          255 IDVSFDCAGF  264 (364)
Q Consensus       255 ~d~vid~~g~  264 (364)
                      +|++|.++|.
T Consensus        82 ~d~vi~~ag~   91 (251)
T PRK07231         82 VDILVNNAGT   91 (251)
T ss_pred             CCEEEECCCC
Confidence            9999998874

>PRK07502 cyclohexadienyl dehydrogenase; Validated

Probab=95.58  E-value=0.19  Score=45.71  Aligned_cols=90  Identities=27%  Similarity=0.321  Sum_probs=59.4

Q ss_pred             CEEEEEcCCHHHHHHHHHHHHCCC-CEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcCCCccEEEEC
Q 017916          183 TNVLIMGAGPIGLVTMLGARAFGA-PRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDC  261 (364)
Q Consensus       183 ~~VLI~Gag~~G~~ai~la~~~g~-~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid~  261 (364)
                      .+|.|.|+|.+|.+.+..++..|. ..|++.++++++.+.++++|......     .+..+    .    -...|+||.|
T Consensus         7 ~~I~IIG~G~mG~sla~~l~~~g~~~~V~~~dr~~~~~~~a~~~g~~~~~~-----~~~~~----~----~~~aDvViia   73 (307)
T PRK07502          7 DRVALIGIGLIGSSLARAIRRLGLAGEIVGADRSAETRARARELGLGDRVT-----TSAAE----A----VKGADLVILC   73 (307)
T ss_pred             cEEEEEeeCHHHHHHHHHHHhcCCCcEEEEEECCHHHHHHHHhCCCCceec-----CCHHH----H----hcCCCEEEEC
Confidence            579999999999999988888875 36888888888888888777532110     11111    1    1357999998


Q ss_pred             CCCHH---HHHHHHHhcccCCEEEEEc
Q 017916          262 AGFNK---TMSTALSATRAGGKVCLVG  285 (364)
Q Consensus       262 ~g~~~---~~~~~~~~l~~~G~~v~~g  285 (364)
                      +....   .+..+...++++..++.++
T Consensus        74 vp~~~~~~v~~~l~~~l~~~~iv~dvg  100 (307)
T PRK07502         74 VPVGASGAVAAEIAPHLKPGAIVTDVG  100 (307)
T ss_pred             CCHHHHHHHHHHHHhhCCCCCEEEeCc
Confidence            87432   2233344566666666554

>CHL00194 ycf39 Ycf39; Provisional

Probab=95.58  E-value=0.18  Score=46.11  Aligned_cols=94  Identities=18%  Similarity=0.224  Sum_probs=56.8

Q ss_pred             EEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcCCCccEEEECC
Q 017916          184 NVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCA  262 (364)
Q Consensus       184 ~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid~~  262 (364)
                      +|||+|+ |-+|...++.+...|. .|.++.++.++...+...++..+. .+-  .+ .+.+....    .++|+||+++
T Consensus         2 kIlVtGatG~iG~~lv~~Ll~~g~-~V~~l~R~~~~~~~l~~~~v~~v~-~Dl--~d-~~~l~~al----~g~d~Vi~~~   72 (317)
T CHL00194          2 SLLVIGATGTLGRQIVRQALDEGY-QVRCLVRNLRKASFLKEWGAELVY-GDL--SL-PETLPPSF----KGVTAIIDAS   72 (317)
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCC-eEEEEEcChHHhhhHhhcCCEEEE-CCC--CC-HHHHHHHH----CCCCEEEECC
Confidence            6999998 9999999999888898 466666666555444445554322 111  11 11232222    4689999987


Q ss_pred             CCH------------HHHHHHHHhcccCC--EEEEEcC
Q 017916          263 GFN------------KTMSTALSATRAGG--KVCLVGM  286 (364)
Q Consensus       263 g~~------------~~~~~~~~~l~~~G--~~v~~g~  286 (364)
                      +..            .....+++.++..|  +++.++.
T Consensus        73 ~~~~~~~~~~~~~~~~~~~~l~~aa~~~gvkr~I~~Ss  110 (317)
T CHL00194         73 TSRPSDLYNAKQIDWDGKLALIEAAKAAKIKRFIFFSI  110 (317)
T ss_pred             CCCCCCccchhhhhHHHHHHHHHHHHHcCCCEEEEecc
Confidence            631            11234555554444  7877664

>PRK08589 short chain dehydrogenase; Validated

Probab=95.58  E-value=0.16  Score=45.28  Aligned_cols=82  Identities=22%  Similarity=0.362  Sum_probs=49.3

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHc---CCC-eEEecCC-CcccHHHHHHHHHHHcCCC
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKEL---GAD-NIVKVST-NLQDIAEEVEKIQKAMGTG  254 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~l---g~~-~~~~~~~-~~~~~~~~i~~~~~~~~~~  254 (364)
                      ++.++||+|+ +.+|.+.++.+...|+ .|+.++++++..+..+++   +.. ..+..|- ..++..+.+..+.+.. ++
T Consensus         5 ~~k~vlItGas~gIG~aia~~l~~~G~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-g~   82 (272)
T PRK08589          5 ENKVAVITGASTGIGQASAIALAQEGA-YVLAVDIAEAVSETVDKIKSNGGKAKAYHVDISDEQQVKDFASEIKEQF-GR   82 (272)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCcHHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHHHc-CC
Confidence            4679999998 9999999998888999 566666664333333333   321 1222221 2233333344443322 47


Q ss_pred             ccEEEECCCC
Q 017916          255 IDVSFDCAGF  264 (364)
Q Consensus       255 ~d~vid~~g~  264 (364)
                      +|++|+++|.
T Consensus        83 id~li~~Ag~   92 (272)
T PRK08589         83 VDVLFNNAGV   92 (272)
T ss_pred             cCEEEECCCC
Confidence            9999998863

>PRK06483 dihydromonapterin reductase; Provisional

Probab=95.58  E-value=0.17  Score=43.81  Aligned_cols=80  Identities=20%  Similarity=0.316  Sum_probs=49.2

Q ss_pred             CCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhH-HHHHHHcCCCeEEecCC-CcccHHHHHHHHHHHcCCCccEE
Q 017916          182 ETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYR-LSVAKELGADNIVKVST-NLQDIAEEVEKIQKAMGTGIDVS  258 (364)
Q Consensus       182 g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~-~~~~~~lg~~~~~~~~~-~~~~~~~~i~~~~~~~~~~~d~v  258 (364)
                      +.++||+|+ +.+|.+.++.+...|++ |+.++++.++ .+.++..++. .+..|- ..++..+.+..+... -+++|++
T Consensus         2 ~k~vlItGas~gIG~~ia~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~~-~~~id~l   78 (236)
T PRK06483          2 PAPILITGAGQRIGLALAWHLLAQGQP-VIVSYRTHYPAIDGLRQAGAQ-CIQADFSTNAGIMAFIDELKQH-TDGLRAI   78 (236)
T ss_pred             CceEEEECCCChHHHHHHHHHHHCCCe-EEEEeCCchhHHHHHHHcCCE-EEEcCCCCHHHHHHHHHHHHhh-CCCccEE
Confidence            458999998 99999999998889994 5556555432 3344455542 222222 223334444443322 2469999


Q ss_pred             EECCCC
Q 017916          259 FDCAGF  264 (364)
Q Consensus       259 id~~g~  264 (364)
                      +.++|.
T Consensus        79 v~~ag~   84 (236)
T PRK06483         79 IHNASD   84 (236)
T ss_pred             EECCcc
Confidence            998873

>PRK09072 short chain dehydrogenase; Provisional

Probab=95.56  E-value=0.18  Score=44.56  Aligned_cols=81  Identities=25%  Similarity=0.328  Sum_probs=49.2

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHH-Hc--CCC-eEEecCCCc-ccHHHHHHHHHHHcCCC
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAK-EL--GAD-NIVKVSTNL-QDIAEEVEKIQKAMGTG  254 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~-~l--g~~-~~~~~~~~~-~~~~~~i~~~~~~~~~~  254 (364)
                      ++.++||+|+ |.+|...++.+...|+ .|+++++++++.+.+. ++  +.. ..+..+-.+ +++.+..+.+..  .++
T Consensus         4 ~~~~vlItG~s~~iG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~--~~~   80 (263)
T PRK09072          4 KDKRVLLTGASGGIGQALAEALAAAGA-RLLLVGRNAEKLEALAARLPYPGRHRWVVADLTSEAGREAVLARARE--MGG   80 (263)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHh--cCC
Confidence            4678999997 9999999999888999 5777777776654332 32  111 122222211 222222222222  357


Q ss_pred             ccEEEECCCC
Q 017916          255 IDVSFDCAGF  264 (364)
Q Consensus       255 ~d~vid~~g~  264 (364)
                      +|++|.++|.
T Consensus        81 id~lv~~ag~   90 (263)
T PRK09072         81 INVLINNAGV   90 (263)
T ss_pred             CCEEEECCCC
Confidence            9999998874

>PRK07774 short chain dehydrogenase; Provisional

Probab=95.55  E-value=0.18  Score=44.10  Aligned_cols=82  Identities=24%  Similarity=0.339  Sum_probs=49.4

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHH-HHHHc---CCC-eEEecCCC-cccHHHHHHHHHHHcCC
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLS-VAKEL---GAD-NIVKVSTN-LQDIAEEVEKIQKAMGT  253 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~-~~~~l---g~~-~~~~~~~~-~~~~~~~i~~~~~~~~~  253 (364)
                      .+.++||+|+ |.+|...++.+...|+ .++.++++.++.+ +.+.+   +.. ..+..+-. .+++.+..+.+.+.. +
T Consensus         5 ~~k~vlItGasg~iG~~la~~l~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-~   82 (250)
T PRK07774          5 DDKVAIVTGAAGGIGQAYAEALAREGA-SVVVADINAEGAERVAKQIVADGGTAIAVQVDVSDPDSAKAMADATVSAF-G   82 (250)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHh-C
Confidence            4678999998 9999999998888898 5677777655432 22222   211 12222221 223333333333322 4


Q ss_pred             CccEEEECCCC
Q 017916          254 GIDVSFDCAGF  264 (364)
Q Consensus       254 ~~d~vid~~g~  264 (364)
                      ++|++|.++|.
T Consensus        83 ~id~vi~~ag~   93 (250)
T PRK07774         83 GIDYLVNNAAI   93 (250)
T ss_pred             CCCEEEECCCC
Confidence            69999998883

>PF08704 GCD14: tRNA methyltransferase complex GCD14 subunit; InterPro: IPR014816 GCD14 is a subunit of the tRNA methyltransferase complex and is required for 1-methyladenosine modification and maturation of initiator methionyl-tRNA []

Probab=95.55  E-value=0.12  Score=45.16  Aligned_cols=108  Identities=28%  Similarity=0.422  Sum_probs=66.3

Q ss_pred             HHHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCC-CEEEEEecChhHHHHHH----HcCCCeEEecCCCcccHHHHHHHHH
Q 017916          174 CRRANIGPETNVLIMGAGPIGLVTMLGARAFGA-PRIVIVDVDDYRLSVAK----ELGADNIVKVSTNLQDIAEEVEKIQ  248 (364)
Q Consensus       174 l~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~-~~vv~~~~~~~~~~~~~----~lg~~~~~~~~~~~~~~~~~i~~~~  248 (364)
                      +...++.||++|+-.|.|+ |.++..|+++.|. ..|+..+..+++.+.++    ..|....+...  ..|..+..  +.
T Consensus        33 ~~~l~i~pG~~VlEaGtGS-G~lt~~l~r~v~p~G~v~t~E~~~~~~~~A~~n~~~~gl~~~v~~~--~~Dv~~~g--~~  107 (247)
T PF08704_consen   33 LMRLDIRPGSRVLEAGTGS-GSLTHALARAVGPTGHVYTYEFREDRAEKARKNFERHGLDDNVTVH--HRDVCEEG--FD  107 (247)
T ss_dssp             HHHTT--TT-EEEEE--TT-SHHHHHHHHHHTTTSEEEEEESSHHHHHHHHHHHHHTTCCTTEEEE--ES-GGCG----S
T ss_pred             HHHcCCCCCCEEEEecCCc-HHHHHHHHHHhCCCeEEEccccCHHHHHHHHHHHHHcCCCCCceeE--ecceeccc--cc
Confidence            4668999999999987654 6678888887753 37899999988876654    35654211110  01211100  00


Q ss_pred             HHcCCCccEEE-ECCCCHHHHHHHHHhc-ccCCEEEEEcC
Q 017916          249 KAMGTGIDVSF-DCAGFNKTMSTALSAT-RAGGKVCLVGM  286 (364)
Q Consensus       249 ~~~~~~~d~vi-d~~g~~~~~~~~~~~l-~~~G~~v~~g~  286 (364)
                      ......+|.|| |--...+.+..+.+.| +++|+++.+..
T Consensus       108 ~~~~~~~DavfLDlp~Pw~~i~~~~~~L~~~gG~i~~fsP  147 (247)
T PF08704_consen  108 EELESDFDAVFLDLPDPWEAIPHAKRALKKPGGRICCFSP  147 (247)
T ss_dssp             TT-TTSEEEEEEESSSGGGGHHHHHHHE-EEEEEEEEEES
T ss_pred             ccccCcccEEEEeCCCHHHHHHHHHHHHhcCCceEEEECC
Confidence            00135688876 6555567889999999 89999999864

; GO: 0016429 tRNA (adenine-N1-)-methyltransferase activity, 0030488 tRNA methylation; PDB: 2YVL_C 1YB2_A 2B25_B 1O54_A 2PWY_B 1I9G_A 3LGA_B 3LHD_C 3MB5_A.

>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=95.54  E-value=0.12  Score=45.13  Aligned_cols=82  Identities=18%  Similarity=0.217  Sum_probs=48.3

Q ss_pred             CCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHH-HHHHcCCC-eEEecCC-CcccHHHHHHHHHHHcCCCccE
Q 017916          182 ETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLS-VAKELGAD-NIVKVST-NLQDIAEEVEKIQKAMGTGIDV  257 (364)
Q Consensus       182 g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~-~~~~lg~~-~~~~~~~-~~~~~~~~i~~~~~~~~~~~d~  257 (364)
                      +.++||+|+ |.+|...+..+...|+++++...++.++.+ +...++.. ..+..|- ..+++.+.++...+..+.++|+
T Consensus         5 ~k~ilItGas~gIG~~la~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~id~   84 (253)
T PRK08642          5 EQTVLVTGGSRGLGAAIARAFAREGARVVVNYHQSEDAAEALADELGDRAIALQADVTDREQVQAMFATATEHFGKPITT   84 (253)
T ss_pred             CCEEEEeCCCCcHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHhCCCCeE
Confidence            568999998 999999999888899964444443444433 33344422 1222221 2233444444443333445999


Q ss_pred             EEECCC
Q 017916          258 SFDCAG  263 (364)
Q Consensus       258 vid~~g  263 (364)
                      +|.+.|
T Consensus        85 li~~ag   90 (253)
T PRK08642         85 VVNNAL   90 (253)
T ss_pred             EEECCC
Confidence            999875

>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain

Probab=95.54  E-value=0.48  Score=40.29  Aligned_cols=92  Identities=17%  Similarity=0.138  Sum_probs=57.6

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChh-HHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcCCCccEEE
Q 017916          181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDY-RLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF  259 (364)
Q Consensus       181 ~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~-~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vi  259 (364)
                      .|.+|||.|+|.+|..-++.+...|+ .|.+++.... ....+.+.|--..+.  .   ++..  ..     -.++++||
T Consensus         8 ~gk~vlVvGgG~va~rk~~~Ll~~ga-~VtVvsp~~~~~l~~l~~~~~i~~~~--~---~~~~--~d-----l~~~~lVi   74 (205)
T TIGR01470         8 EGRAVLVVGGGDVALRKARLLLKAGA-QLRVIAEELESELTLLAEQGGITWLA--R---CFDA--DI-----LEGAFLVI   74 (205)
T ss_pred             CCCeEEEECcCHHHHHHHHHHHHCCC-EEEEEcCCCCHHHHHHHHcCCEEEEe--C---CCCH--HH-----hCCcEEEE
Confidence            46799999999999999999999999 5666654332 222222223111111  1   1111  11     14789999


Q ss_pred             ECCCCHHHHHHHHHhcccCCEEEEEc
Q 017916          260 DCAGFNKTMSTALSATRAGGKVCLVG  285 (364)
Q Consensus       260 d~~g~~~~~~~~~~~l~~~G~~v~~g  285 (364)
                      -+.+.++.-..+....+..|..+...
T Consensus        75 ~at~d~~ln~~i~~~a~~~~ilvn~~  100 (205)
T TIGR01470        75 AATDDEELNRRVAHAARARGVPVNVV  100 (205)
T ss_pred             ECCCCHHHHHHHHHHHHHcCCEEEEC
Confidence            99997656556666666777777554

This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.

>PRK07574 formate dehydrogenase; Provisional

Probab=95.53  E-value=0.25  Score=46.26  Aligned_cols=92  Identities=22%  Similarity=0.287  Sum_probs=62.1

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcCCCccEEEE
Q 017916          181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  260 (364)
Q Consensus       181 ~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid  260 (364)
                      .|.+|.|.|.|.+|+.+++.++.+|+ .|.+.++.....+..+.++...   +    .+    +.++.    ...|+|+-
T Consensus       191 ~gktVGIvG~G~IG~~vA~~l~~fG~-~V~~~dr~~~~~~~~~~~g~~~---~----~~----l~ell----~~aDvV~l  254 (385)
T PRK07574        191 EGMTVGIVGAGRIGLAVLRRLKPFDV-KLHYTDRHRLPEEVEQELGLTY---H----VS----FDSLV----SVCDVVTI  254 (385)
T ss_pred             CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEECCCCCchhhHhhcCcee---c----CC----HHHHh----hcCCEEEE
Confidence            56889999999999999999999999 6788877654444444555431   1    12    22222    35799887


Q ss_pred             CCCCHHH----H-HHHHHhcccCCEEEEEcCCC
Q 017916          261 CAGFNKT----M-STALSATRAGGKVCLVGMGH  288 (364)
Q Consensus       261 ~~g~~~~----~-~~~~~~l~~~G~~v~~g~~~  288 (364)
                      +....+.    + ...+..|+++..++.++...
T Consensus       255 ~lPlt~~T~~li~~~~l~~mk~ga~lIN~aRG~  287 (385)
T PRK07574        255 HCPLHPETEHLFDADVLSRMKRGSYLVNTARGK  287 (385)
T ss_pred             cCCCCHHHHHHhCHHHHhcCCCCcEEEECCCCc
Confidence            7653222    1 24678899999888886543

>PRK08703 short chain dehydrogenase; Provisional

Probab=95.50  E-value=0.15  Score=44.38  Aligned_cols=83  Identities=19%  Similarity=0.346  Sum_probs=50.6

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHH-HHc---CC-C---eEEecCC-CcccHHHHHHHHHHH
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KEL---GA-D---NIVKVST-NLQDIAEEVEKIQKA  250 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~-~~l---g~-~---~~~~~~~-~~~~~~~~i~~~~~~  250 (364)
                      ++.+++|+|+ |.+|...++.+...|+ .|++++++.++.+.+ .++   +. .   ...|... ...++.+....+...
T Consensus         5 ~~k~vlItG~sggiG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~i~~~   83 (239)
T PRK08703          5 SDKTILVTGASQGLGEQVAKAYAAAGA-TVILVARHQKKLEKVYDAIVEAGHPEPFAIRFDLMSAEEKEFEQFAATIAEA   83 (239)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHcCC-EEEEEeCChHHHHHHHHHHHHcCCCCcceEEeeecccchHHHHHHHHHHHHH
Confidence            4579999998 9999999999988999 577777777654432 222   21 1   1122211 122333333334333


Q ss_pred             cCCCccEEEECCCC
Q 017916          251 MGTGIDVSFDCAGF  264 (364)
Q Consensus       251 ~~~~~d~vid~~g~  264 (364)
                      .+..+|++|.++|.
T Consensus        84 ~~~~id~vi~~ag~   97 (239)
T PRK08703         84 TQGKLDGIVHCAGY   97 (239)
T ss_pred             hCCCCCEEEEeccc
Confidence            33578999998883

>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional

Probab=95.49  E-value=0.19  Score=44.91  Aligned_cols=104  Identities=19%  Similarity=0.273  Sum_probs=62.4

Q ss_pred             CCCEEEEEcC---CHHHHHHHHHHHHCCCCEEEEEecChh---HHH-HHHHcCCCeEEecCC-CcccHHHHHHHHHHHcC
Q 017916          181 PETNVLIMGA---GPIGLVTMLGARAFGAPRIVIVDVDDY---RLS-VAKELGADNIVKVST-NLQDIAEEVEKIQKAMG  252 (364)
Q Consensus       181 ~g~~VLI~Ga---g~~G~~ai~la~~~g~~~vv~~~~~~~---~~~-~~~~lg~~~~~~~~~-~~~~~~~~i~~~~~~~~  252 (364)
                      .+.++||+|+   +++|.+.++.+...|++ |+.+.++.+   +.+ +.++++....+..|- ..++..+.++.+.+. -
T Consensus         4 ~~k~~lItGas~~~GIG~aiA~~la~~G~~-Vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~i~~~-~   81 (274)
T PRK08415          4 KGKKGLIVGVANNKSIAYGIAKACFEQGAE-LAFTYLNEALKKRVEPIAQELGSDYVYELDVSKPEHFKSLAESLKKD-L   81 (274)
T ss_pred             CCcEEEEECCCCCCCHHHHHHHHHHHCCCE-EEEEecCHHHHHHHHHHHHhcCCceEEEecCCCHHHHHHHHHHHHHH-c
Confidence            4679999986   48999999988889994 555655532   222 224455332222222 223344444444332 3


Q ss_pred             CCccEEEECCCCH--------------H---------------HHHHHHHhcccCCEEEEEcC
Q 017916          253 TGIDVSFDCAGFN--------------K---------------TMSTALSATRAGGKVCLVGM  286 (364)
Q Consensus       253 ~~~d~vid~~g~~--------------~---------------~~~~~~~~l~~~G~~v~~g~  286 (364)
                      +++|++|+++|..              +               ..+.++..|..+|+++.++.
T Consensus        82 g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~g~Iv~isS  144 (274)
T PRK08415         82 GKIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLNDGASVLTLSY  144 (274)
T ss_pred             CCCCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhccCCcEEEEec
Confidence            5799999998731              1               23445566677789887763

>PLN02780 ketoreductase/ oxidoreductase

Probab=95.48  E-value=0.12  Score=47.31  Aligned_cols=79  Identities=23%  Similarity=0.338  Sum_probs=48.7

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHH-HHc----CCCe----EEecCCCcccHHHHHHHHHHH
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KEL----GADN----IVKVSTNLQDIAEEVEKIQKA  250 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~-~~l----g~~~----~~~~~~~~~~~~~~i~~~~~~  250 (364)
                      .|.++||+|+ +++|.+.++.+...|++ |+.++++.++.+.+ +++    +...    ..|..   .+..+.++.+.+.
T Consensus        52 ~g~~~lITGAs~GIG~alA~~La~~G~~-Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~---~~~~~~~~~l~~~  127 (320)
T PLN02780         52 YGSWALVTGPTDGIGKGFAFQLARKGLN-LVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFS---GDIDEGVKRIKET  127 (320)
T ss_pred             cCCEEEEeCCCcHHHHHHHHHHHHCCCC-EEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECC---CCcHHHHHHHHHH
Confidence            5889999998 99999988888888995 66677777765433 222    1111    12332   1233333333332


Q ss_pred             c-CCCccEEEECCC
Q 017916          251 M-GTGIDVSFDCAG  263 (364)
Q Consensus       251 ~-~~~~d~vid~~g  263 (364)
                      . +.++|++|+++|
T Consensus       128 ~~~~didilVnnAG  141 (320)
T PLN02780        128 IEGLDVGVLINNVG  141 (320)
T ss_pred             hcCCCccEEEEecC
Confidence            2 235679999876

>PRK08340 glucose-1-dehydrogenase; Provisional

Probab=95.47  E-value=0.19  Score=44.24  Aligned_cols=79  Identities=32%  Similarity=0.318  Sum_probs=48.5

Q ss_pred             EEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHH-HHc---CCCeEEecCC-CcccHHHHHHHHHHHcCCCccE
Q 017916          184 NVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KEL---GADNIVKVST-NLQDIAEEVEKIQKAMGTGIDV  257 (364)
Q Consensus       184 ~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~-~~l---g~~~~~~~~~-~~~~~~~~i~~~~~~~~~~~d~  257 (364)
                      ++||+|+ +++|.+.++.+...|+ .|+.+++++++.+.+ .++   +-...+..|- ..++..+.++.+.+. -+++|+
T Consensus         2 ~vlItGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~-~g~id~   79 (259)
T PRK08340          2 NVLVTASSRGIGFNVARELLKKGA-RVVISSRNEENLEKALKELKEYGEVYAVKADLSDKDDLKNLVKEAWEL-LGGIDA   79 (259)
T ss_pred             eEEEEcCCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEcCCCCHHHHHHHHHHHHHh-cCCCCE
Confidence            6899998 9999999999888999 567777766554322 222   3222233322 223344444443332 347999


Q ss_pred             EEECCCC
Q 017916          258 SFDCAGF  264 (364)
Q Consensus       258 vid~~g~  264 (364)
                      +|+++|.
T Consensus        80 li~naG~   86 (259)
T PRK08340         80 LVWNAGN   86 (259)
T ss_pred             EEECCCC
Confidence            9998873

>PRK08339 short chain dehydrogenase; Provisional

Probab=95.47  E-value=0.14  Score=45.29  Aligned_cols=81  Identities=15%  Similarity=0.208  Sum_probs=50.3

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHH-HHc----CCC-eEEecCC-CcccHHHHHHHHHHHcC
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KEL----GAD-NIVKVST-NLQDIAEEVEKIQKAMG  252 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~-~~l----g~~-~~~~~~~-~~~~~~~~i~~~~~~~~  252 (364)
                      .|.++||+|+ +++|.+.++.+...|+ .|+.++++.++.+.+ +++    +.. ..+..|- +.++..+.++.+. . -
T Consensus         7 ~~k~~lItGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~-~-~   83 (263)
T PRK08339          7 SGKLAFTTASSKGIGFGVARVLARAGA-DVILLSRNEENLKKAREKIKSESNVDVSYIVADLTKREDLERTVKELK-N-I   83 (263)
T ss_pred             CCCEEEEeCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHHH-h-h
Confidence            4778999998 9999999999999999 567777776654433 222    322 1222221 2233333343332 1 2


Q ss_pred             CCccEEEECCCC
Q 017916          253 TGIDVSFDCAGF  264 (364)
Q Consensus       253 ~~~d~vid~~g~  264 (364)
                      +++|++++++|.
T Consensus        84 g~iD~lv~nag~   95 (263)
T PRK08339         84 GEPDIFFFSTGG   95 (263)
T ss_pred             CCCcEEEECCCC
Confidence            469999998874

>PRK08628 short chain dehydrogenase; Provisional

Probab=95.46  E-value=0.17  Score=44.51  Aligned_cols=82  Identities=24%  Similarity=0.209  Sum_probs=50.4

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHc---CCC-eEEecCCC-cccHHHHHHHHHHHcCCC
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKEL---GAD-NIVKVSTN-LQDIAEEVEKIQKAMGTG  254 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~l---g~~-~~~~~~~~-~~~~~~~i~~~~~~~~~~  254 (364)
                      ++.++||+|+ |.+|...++.+...|++ ++++.+++++.+..+++   +.. ..+..+-. .+++...+..+... -++
T Consensus         6 ~~~~ilItGasggiG~~la~~l~~~G~~-v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~~   83 (258)
T PRK08628          6 KDKVVIVTGGASGIGAAISLRLAEEGAI-PVIFGRSAPDDEFAEELRALQPRAEFVQVDLTDDAQCRDAVEQTVAK-FGR   83 (258)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCc-EEEEcCChhhHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHh-cCC
Confidence            4679999998 99999999988889995 55555666554444433   322 12222221 23333334443332 247


Q ss_pred             ccEEEECCCC
Q 017916          255 IDVSFDCAGF  264 (364)
Q Consensus       255 ~d~vid~~g~  264 (364)
                      +|++|.++|.
T Consensus        84 id~vi~~ag~   93 (258)
T PRK08628         84 IDGLVNNAGV   93 (258)
T ss_pred             CCEEEECCcc
Confidence            9999999883

>TIGR00417 speE spermidine synthase

Probab=95.45  E-value=0.31  Score=43.47  Aligned_cols=99  Identities=17%  Similarity=0.182  Sum_probs=61.0

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcC-CC------eEEecCCCcccHHHHHHHHHHHcC
Q 017916          180 GPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELG-AD------NIVKVSTNLQDIAEEVEKIQKAMG  252 (364)
Q Consensus       180 ~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg-~~------~~~~~~~~~~~~~~~i~~~~~~~~  252 (364)
                      +.+.+||+.|+|. |..+..+++....+.+.+++.+++-.+.+++.- ..      .-+.+  ...|..+.++    ...
T Consensus        71 ~~p~~VL~iG~G~-G~~~~~ll~~~~~~~v~~veid~~vi~~a~~~~~~~~~~~~~~~v~i--~~~D~~~~l~----~~~  143 (270)
T TIGR00417        71 PNPKHVLVIGGGD-GGVLREVLKHKSVEKATLVDIDEKVIELSKKFLPSLAGSYDDPRVDL--QIDDGFKFLA----DTE  143 (270)
T ss_pred             CCCCEEEEEcCCc-hHHHHHHHhCCCcceEEEEeCCHHHHHHHHHHhHhhcccccCCceEE--EECchHHHHH----hCC
Confidence            4456999998755 445666677665668999998887777766531 10      00000  0123222222    224


Q ss_pred             CCccEEEE-CC---C------CHHHHHHHHHhcccCCEEEEEc
Q 017916          253 TGIDVSFD-CA---G------FNKTMSTALSATRAGGKVCLVG  285 (364)
Q Consensus       253 ~~~d~vid-~~---g------~~~~~~~~~~~l~~~G~~v~~g  285 (364)
                      +.+|+||- ..   +      +.+.++.+.+.|+++|.++...
T Consensus       144 ~~yDvIi~D~~~~~~~~~~l~~~ef~~~~~~~L~pgG~lv~~~  186 (270)
T TIGR00417       144 NTFDVIIVDSTDPVGPAETLFTKEFYELLKKALNEDGIFVAQS  186 (270)
T ss_pred             CCccEEEEeCCCCCCcccchhHHHHHHHHHHHhCCCcEEEEcC
Confidence            68999874 32   1      2356678899999999998763

the SpeE subunit of spermidine synthase catalysesthe reaction (putrescine + S-adenosylmethioninamine = spermidine + 5'-methylthioadenosine) and is involved in polyamine biosynthesis and in the biosynthesis of spermidine from arganine. The region between residues 77 and 120 of the seed alignment is thought to be involved in binding to decarboxylated SAM.

>PRK08287 cobalt-precorrin-6Y C(15)-methyltransferase; Validated

Probab=95.45  E-value=0.36  Score=40.31  Aligned_cols=99  Identities=19%  Similarity=0.332  Sum_probs=63.4

Q ss_pred             HHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHH----cCCCeEEecCCCcccHHHHHHHHHHH
Q 017916          175 RRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKE----LGADNIVKVSTNLQDIAEEVEKIQKA  250 (364)
Q Consensus       175 ~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~i~~~~~~  250 (364)
                      ....+.++++||=.|+|. |..++.+++......+++++.+++..+.+++    ++...+.....   +...       .
T Consensus        25 ~~l~~~~~~~vLDiG~G~-G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~n~~~~~~~~i~~~~~---d~~~-------~   93 (187)
T PRK08287         25 SKLELHRAKHLIDVGAGT-GSVSIEAALQFPSLQVTAIERNPDALRLIKENRQRFGCGNIDIIPG---EAPI-------E   93 (187)
T ss_pred             HhcCCCCCCEEEEECCcC-CHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCCeEEEec---Cchh-------h
Confidence            445667889999888754 6677777776644479999998887666543    44332221111   1111       1


Q ss_pred             cCCCccEEEECCC---CHHHHHHHHHhcccCCEEEEE
Q 017916          251 MGTGIDVSFDCAG---FNKTMSTALSATRAGGKVCLV  284 (364)
Q Consensus       251 ~~~~~d~vid~~g---~~~~~~~~~~~l~~~G~~v~~  284 (364)
                      ....+|+++....   -.+.+..+.+.|+++|+++..
T Consensus        94 ~~~~~D~v~~~~~~~~~~~~l~~~~~~Lk~gG~lv~~  130 (187)
T PRK08287         94 LPGKADAIFIGGSGGNLTAIIDWSLAHLHPGGRLVLT  130 (187)
T ss_pred             cCcCCCEEEECCCccCHHHHHHHHHHhcCCCeEEEEE
Confidence            1346999986432   135677889999999998764

>PRK08618 ornithine cyclodeaminase; Validated

Probab=95.45  E-value=0.61  Score=42.82  Aligned_cols=99  Identities=12%  Similarity=0.109  Sum_probs=64.8

Q ss_pred             HHcCCCCCCEEEEEcCCHHHHHHHHH-HHHCCCCEEEEEecChhHHHH-HHHc----CCCeEEecCCCcccHHHHHHHHH
Q 017916          175 RRANIGPETNVLIMGAGPIGLVTMLG-ARAFGAPRIVIVDVDDYRLSV-AKEL----GADNIVKVSTNLQDIAEEVEKIQ  248 (364)
Q Consensus       175 ~~~~~~~g~~VLI~Gag~~G~~ai~l-a~~~g~~~vv~~~~~~~~~~~-~~~l----g~~~~~~~~~~~~~~~~~i~~~~  248 (364)
                      +....+...+++|.|+|..|.+.+.. +...+.+.|.+.+++.++.+. ++++    +.. +..++    +..+    ..
T Consensus       120 ~~la~~~~~~v~iiGaG~~a~~~~~al~~~~~~~~v~v~~r~~~~a~~~~~~~~~~~~~~-~~~~~----~~~~----~~  190 (325)
T PRK08618        120 KYLAREDAKTLCLIGTGGQAKGQLEAVLAVRDIERVRVYSRTFEKAYAFAQEIQSKFNTE-IYVVN----SADE----AI  190 (325)
T ss_pred             HHhcCCCCcEEEEECCcHHHHHHHHHHHhcCCccEEEEECCCHHHHHHHHHHHHHhcCCc-EEEeC----CHHH----HH
Confidence            44333456789999999888776654 456788889999888877543 3333    432 22221    2222    21


Q ss_pred             HHcCCCccEEEECCCCHHHHHHHHHhcccCCEEEEEcCCC
Q 017916          249 KAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGH  288 (364)
Q Consensus       249 ~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~  288 (364)
                          ...|+|+.|+.+...+ .. +.+++|-++..+|...
T Consensus       191 ----~~aDiVi~aT~s~~p~-i~-~~l~~G~hV~~iGs~~  224 (325)
T PRK08618        191 ----EEADIIVTVTNAKTPV-FS-EKLKKGVHINAVGSFM  224 (325)
T ss_pred             ----hcCCEEEEccCCCCcc-hH-HhcCCCcEEEecCCCC
Confidence                3689999999876433 33 8899988988888543

>COG0031 CysK Cysteine synthase [Amino acid transport and metabolism]

Probab=95.45  E-value=0.53  Score=42.15  Aligned_cols=57  Identities=23%  Similarity=0.383  Sum_probs=45.7

Q ss_pred             HHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEe--cChhHHHHHHHcCCCeEE
Q 017916          175 RRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVD--VDDYRLSVAKELGADNIV  231 (364)
Q Consensus       175 ~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~--~~~~~~~~~~~lg~~~~~  231 (364)
                      +...++||++|+---+|.+|.+.+.+|+.+|++.++++.  .+.+|..+++.+|+.-+.
T Consensus        55 ~~G~l~pG~tIVE~TSGNTGI~LA~vaa~~Gy~~iivmP~~~S~er~~~l~a~GAevi~  113 (300)
T COG0031          55 KRGLLKPGGTIVEATSGNTGIALAMVAAAKGYRLIIVMPETMSQERRKLLRALGAEVIL  113 (300)
T ss_pred             HcCCCCCCCEEEEcCCChHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHcCCEEEE
Confidence            457799999666644599999999999999998666663  377899999999987544

>PRK07453 protochlorophyllide oxidoreductase; Validated

Probab=95.43  E-value=0.19  Score=46.00  Aligned_cols=81  Identities=22%  Similarity=0.358  Sum_probs=49.1

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHH-HHHcCC---C-eEEecCC-CcccHHHHHHHHHHHcCC
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSV-AKELGA---D-NIVKVST-NLQDIAEEVEKIQKAMGT  253 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~-~~~lg~---~-~~~~~~~-~~~~~~~~i~~~~~~~~~  253 (364)
                      .+.++||+|+ |.+|...++.+...|+ .|+.+.++.++.+. .+++..   . ..+..+- ...+..+.+..+. ....
T Consensus         5 ~~k~vlVTGas~gIG~~~a~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~-~~~~   82 (322)
T PRK07453          5 AKGTVIITGASSGVGLYAAKALAKRGW-HVIMACRNLKKAEAAAQELGIPPDSYTIIHIDLGDLDSVRRFVDDFR-ALGK   82 (322)
T ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhhccCCceEEEEecCCCHHHHHHHHHHHH-HhCC
Confidence            4678999998 9999999998888898 56666676665443 334421   1 1221221 1223333333322 2245


Q ss_pred             CccEEEECCC
Q 017916          254 GIDVSFDCAG  263 (364)
Q Consensus       254 ~~d~vid~~g  263 (364)
                      ++|++|+++|
T Consensus        83 ~iD~li~nAg   92 (322)
T PRK07453         83 PLDALVCNAA   92 (322)
T ss_pred             CccEEEECCc
Confidence            6999999887

>PRK07523 gluconate 5-dehydrogenase; Provisional

Probab=95.42  E-value=0.14  Score=45.03  Aligned_cols=82  Identities=18%  Similarity=0.295  Sum_probs=49.7

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHH-HH---HcCCCe-EEecCCC-cccHHHHHHHHHHHcCC
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSV-AK---ELGADN-IVKVSTN-LQDIAEEVEKIQKAMGT  253 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~-~~---~lg~~~-~~~~~~~-~~~~~~~i~~~~~~~~~  253 (364)
                      .+.++||+|+ |.+|.+.++.+...|+ .|+.++++.++.+. ..   ..|... .+..+-. .+++.+.+..... .-+
T Consensus         9 ~~k~vlItGa~g~iG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~-~~~   86 (255)
T PRK07523          9 TGRRALVTGSSQGIGYALAEGLAQAGA-EVILNGRDPAKLAAAAESLKGQGLSAHALAFDVTDHDAVRAAIDAFEA-EIG   86 (255)
T ss_pred             CCCEEEEECCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCceEEEEEccCCCHHHHHHHHHHHHH-hcC
Confidence            4789999998 9999999998888899 56677666654332 22   223221 2222221 2333333333322 235


Q ss_pred             CccEEEECCCC
Q 017916          254 GIDVSFDCAGF  264 (364)
Q Consensus       254 ~~d~vid~~g~  264 (364)
                      ++|++|.++|.
T Consensus        87 ~~d~li~~ag~   97 (255)
T PRK07523         87 PIDILVNNAGM   97 (255)
T ss_pred             CCCEEEECCCC
Confidence            79999998874

>PRK07576 short chain dehydrogenase; Provisional

Probab=95.38  E-value=0.23  Score=44.01  Aligned_cols=81  Identities=17%  Similarity=0.220  Sum_probs=49.4

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHH-HHHH---cCCC-eEEecCCC-cccHHHHHHHHHHHcCC
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLS-VAKE---LGAD-NIVKVSTN-LQDIAEEVEKIQKAMGT  253 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~-~~~~---lg~~-~~~~~~~~-~~~~~~~i~~~~~~~~~  253 (364)
                      ++.++||+|+ |.+|...++.+...|+ .|+.+++++++.+ ..+.   .+.. ..+..|-. ..++.+.++..... .+
T Consensus         8 ~~k~ilItGasggIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~-~~   85 (264)
T PRK07576          8 AGKNVVVVGGTSGINLGIAQAFARAGA-NVAVASRSQEKVDAAVAQLQQAGPEGLGVSADVRDYAAVEAAFAQIADE-FG   85 (264)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHH-cC
Confidence            5789999998 9999999999988999 5677776665432 2222   2322 12222222 22333334443322 24


Q ss_pred             CccEEEECCC
Q 017916          254 GIDVSFDCAG  263 (364)
Q Consensus       254 ~~d~vid~~g  263 (364)
                      ++|++|.+.|
T Consensus        86 ~iD~vi~~ag   95 (264)
T PRK07576         86 PIDVLVSGAA   95 (264)
T ss_pred             CCCEEEECCC
Confidence            7999998875

>PRK07478 short chain dehydrogenase; Provisional

Probab=95.38  E-value=0.22  Score=43.72  Aligned_cols=82  Identities=21%  Similarity=0.193  Sum_probs=50.2

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHH-HH---cCCCe-EEecCC-CcccHHHHHHHHHHHcCC
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KE---LGADN-IVKVST-NLQDIAEEVEKIQKAMGT  253 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~-~~---lg~~~-~~~~~~-~~~~~~~~i~~~~~~~~~  253 (364)
                      .+.++||+|+ +++|.+.+..+...|+ .|+.+.+++++.+.+ .+   .+... .+..+- ..++..+.++.+.+. -+
T Consensus         5 ~~k~~lItGas~giG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~   82 (254)
T PRK07478          5 NGKVAIITGASSGIGRAAAKLFAREGA-KVVVGARRQAELDQLVAEIRAEGGEAVALAGDVRDEAYAKALVALAVER-FG   82 (254)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHh-cC
Confidence            3678999998 9999999998888999 466666766654432 22   33222 222222 122333334433332 24


Q ss_pred             CccEEEECCCC
Q 017916          254 GIDVSFDCAGF  264 (364)
Q Consensus       254 ~~d~vid~~g~  264 (364)
                      ++|++|.++|.
T Consensus        83 ~id~li~~ag~   93 (254)
T PRK07478         83 GLDIAFNNAGT   93 (254)
T ss_pred             CCCEEEECCCC
Confidence            79999998873

>PRK05854 short chain dehydrogenase; Provisional

Probab=95.38  E-value=0.16  Score=46.36  Aligned_cols=82  Identities=18%  Similarity=0.261  Sum_probs=48.4

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHH-HHHHc-----CCC-eEEecCCC-cccHHHHHHHHHHHc
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLS-VAKEL-----GAD-NIVKVSTN-LQDIAEEVEKIQKAM  251 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~-~~~~l-----g~~-~~~~~~~~-~~~~~~~i~~~~~~~  251 (364)
                      .|.+++|+|+ +++|.+.+..+...|+ .|+.+.++.++.+ .++++     +.. ..+..|-. ..+..+....+.. .
T Consensus        13 ~gk~~lITGas~GIG~~~a~~La~~G~-~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~~~~~~~~-~   90 (313)
T PRK05854         13 SGKRAVVTGASDGLGLGLARRLAAAGA-EVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSLASVAALGEQLRA-E   90 (313)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCHHHHHHHHHHHHH-h
Confidence            4679999998 9999999998888999 5666666665543 22222     111 12222221 1222333333322 2


Q ss_pred             CCCccEEEECCCC
Q 017916          252 GTGIDVSFDCAGF  264 (364)
Q Consensus       252 ~~~~d~vid~~g~  264 (364)
                      .+++|++|+++|.
T Consensus        91 ~~~iD~li~nAG~  103 (313)
T PRK05854         91 GRPIHLLINNAGV  103 (313)
T ss_pred             CCCccEEEECCcc
Confidence            3579999998873

>PRK08643 acetoin reductase; Validated

Probab=95.37  E-value=0.21  Score=43.87  Aligned_cols=81  Identities=21%  Similarity=0.286  Sum_probs=48.8

Q ss_pred             CCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHH-HH---cCCCe-EEecCC-CcccHHHHHHHHHHHcCCC
Q 017916          182 ETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KE---LGADN-IVKVST-NLQDIAEEVEKIQKAMGTG  254 (364)
Q Consensus       182 g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~-~~---lg~~~-~~~~~~-~~~~~~~~i~~~~~~~~~~  254 (364)
                      +.++||+|+ |.+|...++.+...|+ .|+.++++.++.+.+ .+   .+... .+..+- ..++..+.++++.+. .++
T Consensus         2 ~k~~lItGas~giG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-~~~   79 (256)
T PRK08643          2 SKVALVTGAGQGIGFAIAKRLVEDGF-KVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSDRDQVFAAVRQVVDT-FGD   79 (256)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHH-cCC
Confidence            568999998 9999999999988999 567776666544322 22   23221 222222 122333333333322 247


Q ss_pred             ccEEEECCCC
Q 017916          255 IDVSFDCAGF  264 (364)
Q Consensus       255 ~d~vid~~g~  264 (364)
                      +|++|.++|.
T Consensus        80 id~vi~~ag~   89 (256)
T PRK08643         80 LNVVVNNAGV   89 (256)
T ss_pred             CCEEEECCCC
Confidence            9999998864

>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional

Probab=95.37  E-value=0.47  Score=41.82  Aligned_cols=81  Identities=16%  Similarity=0.208  Sum_probs=46.6

Q ss_pred             CCCEEEEEcC---CHHHHHHHHHHHHCCCCEEEEEecCh---hHHH-HHHHcC-CC-eEEecCC-CcccHHHHHHHHHHH
Q 017916          181 PETNVLIMGA---GPIGLVTMLGARAFGAPRIVIVDVDD---YRLS-VAKELG-AD-NIVKVST-NLQDIAEEVEKIQKA  250 (364)
Q Consensus       181 ~g~~VLI~Ga---g~~G~~ai~la~~~g~~~vv~~~~~~---~~~~-~~~~lg-~~-~~~~~~~-~~~~~~~~i~~~~~~  250 (364)
                      .|.++||+|+   +++|.+.++.+...|++ |+.+.++.   ++.+ +.+++. .. ..+..|- ..++..+.++.+.+.
T Consensus         6 ~~k~~lItGa~~s~GIG~aia~~la~~G~~-v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~   84 (257)
T PRK08594          6 EGKTYVVMGVANKRSIAWGIARSLHNAGAK-LVFTYAGERLEKEVRELADTLEGQESLLLPCDVTSDEEITACFETIKEE   84 (257)
T ss_pred             CCCEEEEECCCCCCCHHHHHHHHHHHCCCE-EEEecCcccchHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHHHHHh
Confidence            4678999986   48999999988889995 55554332   2222 333442 11 1222221 223344444443332


Q ss_pred             cCCCccEEEECCC
Q 017916          251 MGTGIDVSFDCAG  263 (364)
Q Consensus       251 ~~~~~d~vid~~g  263 (364)
                       -+++|++++++|
T Consensus        85 -~g~ld~lv~nag   96 (257)
T PRK08594         85 -VGVIHGVAHCIA   96 (257)
T ss_pred             -CCCccEEEECcc
Confidence             257999999876

>TIGR00563 rsmB ribosomal RNA small subunit methyltransferase RsmB

Probab=95.33  E-value=0.35  Score=46.20  Aligned_cols=106  Identities=16%  Similarity=0.171  Sum_probs=65.6

Q ss_pred             HHHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHH----HcCCCe-EEecCCCcccHHHHHHHHH
Q 017916          174 CRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAK----ELGADN-IVKVSTNLQDIAEEVEKIQ  248 (364)
Q Consensus       174 l~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~----~lg~~~-~~~~~~~~~~~~~~i~~~~  248 (364)
                      .....+++|++||=.|+|+ |..+.++++.++...+++++.++++.+.++    .+|... +...+....+.    ..+.
T Consensus       231 ~~~L~~~~g~~VLDlcag~-G~kt~~la~~~~~~~v~a~D~~~~~l~~~~~n~~r~g~~~~v~~~~~d~~~~----~~~~  305 (426)
T TIGR00563       231 ATWLAPQNEETILDACAAP-GGKTTHILELAPQAQVVALDIHEHRLKRVYENLKRLGLTIKAETKDGDGRGP----SQWA  305 (426)
T ss_pred             HHHhCCCCCCeEEEeCCCc-cHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHHcCCCeEEEEeccccccc----cccc
Confidence            3556778999999887644 445556666665347999999998876553    456652 21111111110    0010


Q ss_pred             HHcCCCccEEE-E--CCCCH-------------------------HHHHHHHHhcccCCEEEEEcC
Q 017916          249 KAMGTGIDVSF-D--CAGFN-------------------------KTMSTALSATRAGGKVCLVGM  286 (364)
Q Consensus       249 ~~~~~~~d~vi-d--~~g~~-------------------------~~~~~~~~~l~~~G~~v~~g~  286 (364)
                        ....+|.|| |  |+|.+                         +.+..+++.|+|||+++....
T Consensus       306 --~~~~fD~VllDaPcSg~G~~~~~p~~~~~~~~~~~~~l~~lQ~~lL~~a~~~LkpgG~lvystc  369 (426)
T TIGR00563       306 --ENEQFDRILLDAPCSATGVIRRHPDIKWLRKPRDIAELAELQSEILDAIWPLLKTGGTLVYATC  369 (426)
T ss_pred             --cccccCEEEEcCCCCCCcccccCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeC
Confidence              134699987 4  55532                         466778899999999997643

The seed alignment is built from bacterial sequences only. Eukaryotic homologs include Nop2, a protein required for processing pre-rRNA, that is likely also a rRNA methyltransferase, although the fine specificity may differ. Cutoff scores are set to avoid treating archaeal and eukaroytic homologs automatically as functionally equivalent, although they may have very similar roles.

>PRK14901 16S rRNA methyltransferase B; Provisional

Probab=95.33  E-value=0.25  Score=47.33  Aligned_cols=106  Identities=22%  Similarity=0.267  Sum_probs=64.5

Q ss_pred             HHcCCCCCCEEEEEcCCHHHHHHHHHHHHCC-CCEEEEEecChhHHHHHH----HcCCCeEEecCCCcccHHHHHHHHHH
Q 017916          175 RRANIGPETNVLIMGAGPIGLVTMLGARAFG-APRIVIVDVDDYRLSVAK----ELGADNIVKVSTNLQDIAEEVEKIQK  249 (364)
Q Consensus       175 ~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g-~~~vv~~~~~~~~~~~~~----~lg~~~~~~~~~~~~~~~~~i~~~~~  249 (364)
                      ....+++|++||=.|+|+ |..+..+++.++ ...|++++.+.++.+.++    .+|...+........++...   . .
T Consensus       246 ~~l~~~~g~~VLDl~ag~-G~kt~~la~~~~~~g~v~a~D~~~~rl~~~~~n~~r~g~~~v~~~~~D~~~~~~~---~-~  320 (434)
T PRK14901        246 PLLDPQPGEVILDACAAP-GGKTTHIAELMGDQGEIWAVDRSASRLKKLQENAQRLGLKSIKILAADSRNLLEL---K-P  320 (434)
T ss_pred             HHhCCCCcCEEEEeCCCC-chhHHHHHHHhCCCceEEEEcCCHHHHHHHHHHHHHcCCCeEEEEeCChhhcccc---c-c
Confidence            446778999998887644 445556666553 237999999998876654    46776533222211111100   0 0


Q ss_pred             HcCCCccEEE-E--CCCC-------------------------HHHHHHHHHhcccCCEEEEEc
Q 017916          250 AMGTGIDVSF-D--CAGF-------------------------NKTMSTALSATRAGGKVCLVG  285 (364)
Q Consensus       250 ~~~~~~d~vi-d--~~g~-------------------------~~~~~~~~~~l~~~G~~v~~g  285 (364)
                      ...+.+|.|+ |  |+|.                         .+.+..+++.|++||+++...
T Consensus       321 ~~~~~fD~Vl~DaPCSg~G~~~r~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~lkpgG~lvyst  384 (434)
T PRK14901        321 QWRGYFDRILLDAPCSGLGTLHRHPDARWRQTPEKIQELAPLQAELLESLAPLLKPGGTLVYAT  384 (434)
T ss_pred             cccccCCEEEEeCCCCcccccccCcchhhhCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEe
Confidence            0124689987 4  4542                         245778899999999998664

>PRK07024 short chain dehydrogenase; Provisional

Probab=95.32  E-value=0.18  Score=44.38  Aligned_cols=80  Identities=21%  Similarity=0.181  Sum_probs=49.1

Q ss_pred             CCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHH-HHcCCC---eEEecCC-CcccHHHHHHHHHHHcCCCc
Q 017916          182 ETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KELGAD---NIVKVST-NLQDIAEEVEKIQKAMGTGI  255 (364)
Q Consensus       182 g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~-~~lg~~---~~~~~~~-~~~~~~~~i~~~~~~~~~~~  255 (364)
                      +.+|||+|+ |.+|...+..+...|+ .|+.+++++++.+.. +++...   ..+..|- ..+++.+.++.+... .+.+
T Consensus         2 ~~~vlItGas~gIG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~-~g~i   79 (257)
T PRK07024          2 PLKVFITGASSGIGQALAREYARQGA-TLGLVARRTDALQAFAARLPKAARVSVYAADVRDADALAAAAADFIAA-HGLP   79 (257)
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhcccCCeeEEEEcCCCCHHHHHHHHHHHHHh-CCCC
Confidence            358999998 9999999999888899 577777776665433 333211   1222222 123333333433332 2368


Q ss_pred             cEEEECCC
Q 017916          256 DVSFDCAG  263 (364)
Q Consensus       256 d~vid~~g  263 (364)
                      |++|.++|
T Consensus        80 d~lv~~ag   87 (257)
T PRK07024         80 DVVIANAG   87 (257)
T ss_pred             CEEEECCC
Confidence            99999877

>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type

Probab=95.31  E-value=0.087  Score=47.30  Aligned_cols=75  Identities=15%  Similarity=0.127  Sum_probs=50.2

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHH-HHcCCCe-EEecCCCcccHHHHHHHHHHHcCCCccEE
Q 017916          181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KELGADN-IVKVSTNLQDIAEEVEKIQKAMGTGIDVS  258 (364)
Q Consensus       181 ~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~-~~lg~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~d~v  258 (364)
                      .+.++||.|+|+.+.+++.-+..+|++.+.++.++.+|.+.+ +.++... +..+..    + +.+...    -..+|+|
T Consensus       124 ~~k~vlvlGaGGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~~~~~~~~~~~----~-~~~~~~----~~~~DiV  194 (282)
T TIGR01809       124 AGFRGLVIGAGGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGVQVGVITRLEG----D-SGGLAI----EKAAEVL  194 (282)
T ss_pred             CCceEEEEcCcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhhhcCcceeccc----h-hhhhhc----ccCCCEE
Confidence            578999999999999999999999998899998888776544 4444211 111110    0 111111    2468999


Q ss_pred             EECCCC
Q 017916          259 FDCAGF  264 (364)
Q Consensus       259 id~~g~  264 (364)
                      |+|+..
T Consensus       195 InaTp~  200 (282)
T TIGR01809       195 VSTVPA  200 (282)
T ss_pred             EECCCC
Confidence            999774

This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.

>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

Probab=95.30  E-value=0.19  Score=44.19  Aligned_cols=81  Identities=30%  Similarity=0.345  Sum_probs=49.5

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHc---CCCe-EEecCC-CcccHHHHHHHHHHHcCCC
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKEL---GADN-IVKVST-NLQDIAEEVEKIQKAMGTG  254 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~l---g~~~-~~~~~~-~~~~~~~~i~~~~~~~~~~  254 (364)
                      .+.++||+|+ |.+|.+.++.+...|+ .|+.+++++...+..+++   +... .+..+- ..++..+.++.+... -++
T Consensus         7 ~~k~vlVtGas~gIG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~~   84 (260)
T PRK12823          7 AGKVVVVTGAAQGIGRGVALRAAAEGA-RVVLVDRSELVHEVAAELRAAGGEALALTADLETYAGAQAAMAAAVEA-FGR   84 (260)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCchHHHHHHHHHHhcCCeEEEEEEeCCCHHHHHHHHHHHHHH-cCC
Confidence            4678999998 9999999999988999 566676654333333333   3321 122221 123333444444332 247


Q ss_pred             ccEEEECCC
Q 017916          255 IDVSFDCAG  263 (364)
Q Consensus       255 ~d~vid~~g  263 (364)
                      +|++|.++|
T Consensus        85 id~lv~nAg   93 (260)
T PRK12823         85 IDVLINNVG   93 (260)
T ss_pred             CeEEEECCc
Confidence            999999886

>PRK01683 trans-aconitate 2-methyltransferase; Provisional

Probab=95.28  E-value=0.31  Score=43.05  Aligned_cols=99  Identities=25%  Similarity=0.297  Sum_probs=66.9

Q ss_pred             HHHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCC-eEEecCCCcccHHHHHHHHHHHcC
Q 017916          174 CRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGAD-NIVKVSTNLQDIAEEVEKIQKAMG  252 (364)
Q Consensus       174 l~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~-~~~~~~~~~~~~~~~i~~~~~~~~  252 (364)
                      +....++++++||-.|+|. |..+..+++..+...+++++.++...+.+++.-.. .++.     .+.    ..+.  ..
T Consensus        24 l~~~~~~~~~~vLDiGcG~-G~~~~~la~~~~~~~v~gvD~s~~~i~~a~~~~~~~~~~~-----~d~----~~~~--~~   91 (258)
T PRK01683         24 LARVPLENPRYVVDLGCGP-GNSTELLVERWPAARITGIDSSPAMLAEARSRLPDCQFVE-----ADI----ASWQ--PP   91 (258)
T ss_pred             HhhCCCcCCCEEEEEcccC-CHHHHHHHHHCCCCEEEEEECCHHHHHHHHHhCCCCeEEE-----Cch----hccC--CC
Confidence            4556678889999998754 66778888877555899999999888877654221 1221     111    1111  13


Q ss_pred             CCccEEEECCC------CHHHHHHHHHhcccCCEEEEE
Q 017916          253 TGIDVSFDCAG------FNKTMSTALSATRAGGKVCLV  284 (364)
Q Consensus       253 ~~~d~vid~~g------~~~~~~~~~~~l~~~G~~v~~  284 (364)
                      ..+|+|+....      ....+..+.+.|+++|.++..
T Consensus        92 ~~fD~v~~~~~l~~~~d~~~~l~~~~~~LkpgG~~~~~  129 (258)
T PRK01683         92 QALDLIFANASLQWLPDHLELFPRLVSLLAPGGVLAVQ  129 (258)
T ss_pred             CCccEEEEccChhhCCCHHHHHHHHHHhcCCCcEEEEE
Confidence            47999986433      135778899999999999875

>PRK07063 short chain dehydrogenase; Provisional

Probab=95.27  E-value=0.16  Score=44.69  Aligned_cols=82  Identities=24%  Similarity=0.271  Sum_probs=50.4

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHH-HHHc-----CCC-eEEecCC-CcccHHHHHHHHHHHc
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSV-AKEL-----GAD-NIVKVST-NLQDIAEEVEKIQKAM  251 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~-~~~l-----g~~-~~~~~~~-~~~~~~~~i~~~~~~~  251 (364)
                      .+.++||+|+ +++|.+.++.+...|+ .|+.+++++++.+. .+++     +.. ..+..+- ..+++.+.++.+... 
T Consensus         6 ~~k~vlVtGas~gIG~~~a~~l~~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-   83 (260)
T PRK07063          6 AGKVALVTGAAQGIGAAIARAFAREGA-AVALADLDAALAERAAAAIARDVAGARVLAVPADVTDAASVAAAVAAAEEA-   83 (260)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHHHHHHHHHHHHHH-
Confidence            4678999998 9999999999989999 46666666655433 2333     211 1222221 223344444444332 


Q ss_pred             CCCccEEEECCCC
Q 017916          252 GTGIDVSFDCAGF  264 (364)
Q Consensus       252 ~~~~d~vid~~g~  264 (364)
                      -+++|++|.++|.
T Consensus        84 ~g~id~li~~ag~   96 (260)
T PRK07063         84 FGPLDVLVNNAGI   96 (260)
T ss_pred             hCCCcEEEECCCc
Confidence            2479999998873

>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional

Probab=95.25  E-value=0.23  Score=43.95  Aligned_cols=82  Identities=21%  Similarity=0.274  Sum_probs=48.1

Q ss_pred             CCCEEEEEcC---CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHH----HcCCCeEEecCC-CcccHHHHHHHHHHHcC
Q 017916          181 PETNVLIMGA---GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAK----ELGADNIVKVST-NLQDIAEEVEKIQKAMG  252 (364)
Q Consensus       181 ~g~~VLI~Ga---g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~----~lg~~~~~~~~~-~~~~~~~~i~~~~~~~~  252 (364)
                      .+.++||+|+   +++|.+.++.+...|++ |+.+.+.++..+.++    +++....+..|- ..++..+.+....+. -
T Consensus         5 ~~k~~lITGa~~~~GIG~a~a~~l~~~G~~-v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~-~   82 (261)
T PRK08690          5 QGKKILITGMISERSIAYGIAKACREQGAE-LAFTYVVDKLEERVRKMAAELDSELVFRCDVASDDEINQVFADLGKH-W   82 (261)
T ss_pred             CCcEEEEECCCCCCcHHHHHHHHHHHCCCE-EEEEcCcHHHHHHHHHHHhccCCceEEECCCCCHHHHHHHHHHHHHH-h
Confidence            4678999984   58999999998889995 555544333223332    234322232222 223444444444332 2


Q ss_pred             CCccEEEECCCC
Q 017916          253 TGIDVSFDCAGF  264 (364)
Q Consensus       253 ~~~d~vid~~g~  264 (364)
                      +++|++|+++|.
T Consensus        83 g~iD~lVnnAG~   94 (261)
T PRK08690         83 DGLDGLVHSIGF   94 (261)
T ss_pred             CCCcEEEECCcc
Confidence            479999998864

>PRK05717 oxidoreductase; Validated

Probab=95.24  E-value=0.26  Score=43.30  Aligned_cols=82  Identities=27%  Similarity=0.279  Sum_probs=50.0

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHH-HHHHcCCC-eEEecCCC-cccHHHHHHHHHHHcCCCcc
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLS-VAKELGAD-NIVKVSTN-LQDIAEEVEKIQKAMGTGID  256 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~-~~~~lg~~-~~~~~~~~-~~~~~~~i~~~~~~~~~~~d  256 (364)
                      .|.++||+|+ |.+|..++..+...|+ .|+.++.+.++.+ ..++++.. ..+..|-. ..+..+.+.++.+.. +++|
T Consensus         9 ~~k~vlItG~sg~IG~~~a~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-g~id   86 (255)
T PRK05717          9 NGRVALVTGAARGIGLGIAAWLIAEGW-QVVLADLDRERGSKVAKALGENAWFIAMDVADEAQVAAGVAEVLGQF-GRLD   86 (255)
T ss_pred             CCCEEEEeCCcchHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHHHHHh-CCCC
Confidence            4678999998 9999999999988898 5666666554433 33445432 12222221 223333334443322 4699


Q ss_pred             EEEECCCC
Q 017916          257 VSFDCAGF  264 (364)
Q Consensus       257 ~vid~~g~  264 (364)
                      ++|.++|.
T Consensus        87 ~li~~ag~   94 (255)
T PRK05717         87 ALVCNAAI   94 (255)
T ss_pred             EEEECCCc
Confidence            99998873

>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=95.22  E-value=0.27  Score=43.18  Aligned_cols=82  Identities=23%  Similarity=0.282  Sum_probs=49.5

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChh--HHHHHHHcCCCe-EEecCC-CcccHHHHHHHHHHHcCCCc
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDY--RLSVAKELGADN-IVKVST-NLQDIAEEVEKIQKAMGTGI  255 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~--~~~~~~~lg~~~-~~~~~~-~~~~~~~~i~~~~~~~~~~~  255 (364)
                      ++.++||+|+ +++|.+.++.+...|++ |+.+.++..  ..+.++..+... .+..|- ..+++.+.++...+. -+++
T Consensus         7 ~~k~~lItGas~gIG~aia~~l~~~G~~-vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-~g~i   84 (251)
T PRK12481          7 NGKVAIITGCNTGLGQGMAIGLAKAGAD-IVGVGVAEAPETQAQVEALGRKFHFITADLIQQKDIDSIVSQAVEV-MGHI   84 (251)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCE-EEEecCchHHHHHHHHHHcCCeEEEEEeCCCCHHHHHHHHHHHHHH-cCCC
Confidence            4789999998 99999999999999995 555544332  123334445332 222222 223344444443332 2479


Q ss_pred             cEEEECCCC
Q 017916          256 DVSFDCAGF  264 (364)
Q Consensus       256 d~vid~~g~  264 (364)
                      |+++++.|.
T Consensus        85 D~lv~~ag~   93 (251)
T PRK12481         85 DILINNAGI   93 (251)
T ss_pred             CEEEECCCc
Confidence            999998873

>PLN02233 ubiquinone biosynthesis methyltransferase

Probab=95.21  E-value=0.46  Score=42.13  Aligned_cols=104  Identities=18%  Similarity=0.202  Sum_probs=66.1

Q ss_pred             HHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCC-CEEEEEecChhHHHHHHHc-C------CCeEEecCCCcccHHHHHHH
Q 017916          175 RRANIGPETNVLIMGAGPIGLVTMLGARAFGA-PRIVIVDVDDYRLSVAKEL-G------ADNIVKVSTNLQDIAEEVEK  246 (364)
Q Consensus       175 ~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~-~~vv~~~~~~~~~~~~~~l-g------~~~~~~~~~~~~~~~~~i~~  246 (364)
                      +...++++++||-.|+|. |..+..+++..+. ..|++++.+++..+.+++. .      ...+......-.+       
T Consensus        67 ~~~~~~~~~~VLDlGcGt-G~~~~~la~~~~~~~~V~gvD~S~~ml~~A~~r~~~~~~~~~~~i~~~~~d~~~-------  138 (261)
T PLN02233         67 SWSGAKMGDRVLDLCCGS-GDLAFLLSEKVGSDGKVMGLDFSSEQLAVAASRQELKAKSCYKNIEWIEGDATD-------  138 (261)
T ss_pred             HHhCCCCCCEEEEECCcC-CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHhhhhhhccCCCeEEEEccccc-------
Confidence            345678899999998754 5567778877653 3799999999888877542 1      1111100011011       


Q ss_pred             HHHHcCCCccEEEECCC------CHHHHHHHHHhcccCCEEEEEcCC
Q 017916          247 IQKAMGTGIDVSFDCAG------FNKTMSTALSATRAGGKVCLVGMG  287 (364)
Q Consensus       247 ~~~~~~~~~d~vid~~g------~~~~~~~~~~~l~~~G~~v~~g~~  287 (364)
                      + ....+.+|.|+...+      -...++++.+.|+|||+++.+...
T Consensus       139 l-p~~~~sfD~V~~~~~l~~~~d~~~~l~ei~rvLkpGG~l~i~d~~  184 (261)
T PLN02233        139 L-PFDDCYFDAITMGYGLRNVVDRLKAMQEMYRVLKPGSRVSILDFN  184 (261)
T ss_pred             C-CCCCCCEeEEEEecccccCCCHHHHHHHHHHHcCcCcEEEEEECC
Confidence            1 001346899876432      135788999999999999887644

>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional

Probab=95.21  E-value=0.23  Score=43.60  Aligned_cols=81  Identities=15%  Similarity=0.209  Sum_probs=48.7

Q ss_pred             CCCEEEEEcCC---HHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCe--EEecCC-CcccHHHHHHHHHHHcCCC
Q 017916          181 PETNVLIMGAG---PIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADN--IVKVST-NLQDIAEEVEKIQKAMGTG  254 (364)
Q Consensus       181 ~g~~VLI~Gag---~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~--~~~~~~-~~~~~~~~i~~~~~~~~~~  254 (364)
                      .|.++||+|++   ++|.+.++.+...|++ |+.+.++++..+.++++....  .+..|- ..++..+.+..+.+. -+.
T Consensus         6 ~~k~~lItGas~~~gIG~a~a~~la~~G~~-Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~-~g~   83 (252)
T PRK06079          6 SGKKIVVMGVANKRSIAWGCAQAIKDQGAT-VIYTYQNDRMKKSLQKLVDEEDLLVECDVASDESIERAFATIKER-VGK   83 (252)
T ss_pred             CCCEEEEeCCCCCCchHHHHHHHHHHCCCE-EEEecCchHHHHHHHhhccCceeEEeCCCCCHHHHHHHHHHHHHH-hCC
Confidence            57899999874   8999999999889995 566655544334444442211  222221 223333334333332 247


Q ss_pred             ccEEEECCC
Q 017916          255 IDVSFDCAG  263 (364)
Q Consensus       255 ~d~vid~~g  263 (364)
                      +|++|+++|
T Consensus        84 iD~lv~nAg   92 (252)
T PRK06079         84 IDGIVHAIA   92 (252)
T ss_pred             CCEEEEccc
Confidence            999999887

>PRK07035 short chain dehydrogenase; Provisional

Probab=95.21  E-value=0.26  Score=43.11  Aligned_cols=81  Identities=15%  Similarity=0.196  Sum_probs=49.8

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHH-HHc---CCC-eEEecCC-CcccHHHHHHHHHHHcCC
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KEL---GAD-NIVKVST-NLQDIAEEVEKIQKAMGT  253 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~-~~l---g~~-~~~~~~~-~~~~~~~~i~~~~~~~~~  253 (364)
                      ++.++||+|+ |.+|.+.++.+...|+ .|+.++++.++.+.+ +++   +.. ..+..+- ...+..+.++.+.+.. +
T Consensus         7 ~~k~vlItGas~gIG~~l~~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~   84 (252)
T PRK07035          7 TGKIALVTGASRGIGEAIAKLLAQQGA-HVIVSSRKLDGCQAVADAIVAAGGKAEALACHIGEMEQIDALFAHIRERH-G   84 (252)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHc-C
Confidence            4578999998 9999999999999999 577777766554322 222   321 1222221 1233333344433322 4


Q ss_pred             CccEEEECCC
Q 017916          254 GIDVSFDCAG  263 (364)
Q Consensus       254 ~~d~vid~~g  263 (364)
                      .+|+++.+.|
T Consensus        85 ~id~li~~ag   94 (252)
T PRK07035         85 RLDILVNNAA   94 (252)
T ss_pred             CCCEEEECCC
Confidence            6999999887

>PRK04148 hypothetical protein; Provisional

Probab=95.20  E-value=0.14  Score=40.04  Aligned_cols=93  Identities=14%  Similarity=0.231  Sum_probs=62.6

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcCCCccEEE
Q 017916          180 GPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF  259 (364)
Q Consensus       180 ~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vi  259 (364)
                      .++.+|++.|.| .|...+..+...|. .|++++.+++..+.+++.+...+.+--. +.++    + +    -+++|++.
T Consensus        15 ~~~~kileIG~G-fG~~vA~~L~~~G~-~ViaIDi~~~aV~~a~~~~~~~v~dDlf-~p~~----~-~----y~~a~liy   82 (134)
T PRK04148         15 GKNKKIVELGIG-FYFKVAKKLKESGF-DVIVIDINEKAVEKAKKLGLNAFVDDLF-NPNL----E-I----YKNAKLIY   82 (134)
T ss_pred             ccCCEEEEEEec-CCHHHHHHHHHCCC-EEEEEECCHHHHHHHHHhCCeEEECcCC-CCCH----H-H----HhcCCEEE
Confidence            456889999988 78755555557898 7999999999999898888755443111 1111    1 1    25789999


Q ss_pred             ECCCCHHHHHHHHHhccc-CCEEEEE
Q 017916          260 DCAGFNKTMSTALSATRA-GGKVCLV  284 (364)
Q Consensus       260 d~~g~~~~~~~~~~~l~~-~G~~v~~  284 (364)
                      ..--.++....+++.-+. +.-++..
T Consensus        83 sirpp~el~~~~~~la~~~~~~~~i~  108 (134)
T PRK04148         83 SIRPPRDLQPFILELAKKINVPLIIK  108 (134)
T ss_pred             EeCCCHHHHHHHHHHHHHcCCCEEEE
Confidence            888777777666666554 3344443

>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional

Probab=95.20  E-value=0.29  Score=43.04  Aligned_cols=82  Identities=20%  Similarity=0.297  Sum_probs=49.1

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHH-H---HHHcCCCe-EEecCCCc-ccHHHHHHHHHHHcCC
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLS-V---AKELGADN-IVKVSTNL-QDIAEEVEKIQKAMGT  253 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~-~---~~~lg~~~-~~~~~~~~-~~~~~~i~~~~~~~~~  253 (364)
                      ++.++||+|+ |.+|..+++.+...|++ |+.+.+++++.+ .   +++.+... .+..+-.+ .++.+.+..+... -+
T Consensus         6 ~~~~vlItGasg~iG~~la~~l~~~G~~-v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-~~   83 (262)
T PRK13394          6 NGKTAVVTGAASGIGKEIALELARAGAA-VAIADLNQDGANAVADEINKAGGKAIGVAMDVTNEDAVNAGIDKVAER-FG   83 (262)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCe-EEEEeCChHHHHHHHHHHHhcCceEEEEECCCCCHHHHHHHHHHHHHH-cC
Confidence            4679999998 99999999999999995 666666664433 2   23344332 12222211 2222233322221 24


Q ss_pred             CccEEEECCCC
Q 017916          254 GIDVSFDCAGF  264 (364)
Q Consensus       254 ~~d~vid~~g~  264 (364)
                      ++|++|.++|.
T Consensus        84 ~~d~vi~~ag~   94 (262)
T PRK13394         84 SVDILVSNAGI   94 (262)
T ss_pred             CCCEEEECCcc
Confidence            68999998874

>PRK07904 short chain dehydrogenase; Provisional

Probab=95.19  E-value=0.26  Score=43.34  Aligned_cols=83  Identities=19%  Similarity=0.337  Sum_probs=48.7

Q ss_pred             CCCCCEEEEEcC-CHHHHHHHHHHHHCC-CCEEEEEecChhH-H-HHHH---HcCCC--eEEecCCC-cccHHHHHHHHH
Q 017916          179 IGPETNVLIMGA-GPIGLVTMLGARAFG-APRIVIVDVDDYR-L-SVAK---ELGAD--NIVKVSTN-LQDIAEEVEKIQ  248 (364)
Q Consensus       179 ~~~g~~VLI~Ga-g~~G~~ai~la~~~g-~~~vv~~~~~~~~-~-~~~~---~lg~~--~~~~~~~~-~~~~~~~i~~~~  248 (364)
                      +..+.+|||+|+ |++|.+.++-+...| + .|+.+.++.++ . ++.+   ..+..  ..+..+-. ..+..+.+++..
T Consensus         5 ~~~~~~vlItGas~giG~~la~~l~~~gg~-~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~   83 (253)
T PRK07904          5 VGNPQTILLLGGTSEIGLAICERYLKNAPA-RVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALDTDSHPKVIDAAF   83 (253)
T ss_pred             cCCCcEEEEEcCCcHHHHHHHHHHHhcCCC-eEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCChHHHHHHHHHHH
Confidence            456789999998 999999998776664 7 56666665543 2 2223   33321  23333322 233333344443


Q ss_pred             HHcCCCccEEEECCCC
Q 017916          249 KAMGTGIDVSFDCAGF  264 (364)
Q Consensus       249 ~~~~~~~d~vid~~g~  264 (364)
                      .  .+++|++|.++|.
T Consensus        84 ~--~g~id~li~~ag~   97 (253)
T PRK07904         84 A--GGDVDVAIVAFGL   97 (253)
T ss_pred             h--cCCCCEEEEeeec
Confidence            2  2579999987764

>PRK07454 short chain dehydrogenase; Provisional

Probab=95.19  E-value=0.31  Score=42.32  Aligned_cols=82  Identities=23%  Similarity=0.252  Sum_probs=50.5

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHH-H---HcCCC-eEEecCC-CcccHHHHHHHHHHHcCC
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-K---ELGAD-NIVKVST-NLQDIAEEVEKIQKAMGT  253 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~-~---~lg~~-~~~~~~~-~~~~~~~~i~~~~~~~~~  253 (364)
                      .+.++||+|+ |.+|..++..+...|. .|++++++.++.+.+ +   +.+.. ..+..+- ..+++.+.++.+.+. -+
T Consensus         5 ~~k~vlItG~sg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~   82 (241)
T PRK07454          5 SMPRALITGASSGIGKATALAFAKAGW-DLALVARSQDALEALAAELRSTGVKAAAYSIDLSNPEAIAPGIAELLEQ-FG   82 (241)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHHHHHHH-cC
Confidence            4568999998 9999999999988999 577777776554332 2   22221 1222222 123333334443332 24


Q ss_pred             CccEEEECCCC
Q 017916          254 GIDVSFDCAGF  264 (364)
Q Consensus       254 ~~d~vid~~g~  264 (364)
                      ++|++|.+.|.
T Consensus        83 ~id~lv~~ag~   93 (241)
T PRK07454         83 CPDVLINNAGM   93 (241)
T ss_pred             CCCEEEECCCc
Confidence            69999999873

>PLN02244 tocopherol O-methyltransferase

Probab=95.19  E-value=0.39  Score=44.40  Aligned_cols=97  Identities=16%  Similarity=0.224  Sum_probs=61.7

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHH----cCCCeEEecCCCcccHHHHHHHHHHHcCCCc
Q 017916          180 GPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKE----LGADNIVKVSTNLQDIAEEVEKIQKAMGTGI  255 (364)
Q Consensus       180 ~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~  255 (364)
                      +++++||=.|+|. |..+..+++..|+ .|++++.++...+.+++    .+...-+.+..  .|..+    + ....+.+
T Consensus       117 ~~~~~VLDiGCG~-G~~~~~La~~~g~-~v~gvD~s~~~i~~a~~~~~~~g~~~~v~~~~--~D~~~----~-~~~~~~F  187 (340)
T PLN02244        117 KRPKRIVDVGCGI-GGSSRYLARKYGA-NVKGITLSPVQAARANALAAAQGLSDKVSFQV--ADALN----Q-PFEDGQF  187 (340)
T ss_pred             CCCCeEEEecCCC-CHHHHHHHHhcCC-EEEEEECCHHHHHHHHHHHHhcCCCCceEEEE--cCccc----C-CCCCCCc
Confidence            7889999988754 5677788888888 78999999876665544    23321111100  01000    0 0013579


Q ss_pred             cEEEECCC-----C-HHHHHHHHHhcccCCEEEEEc
Q 017916          256 DVSFDCAG-----F-NKTMSTALSATRAGGKVCLVG  285 (364)
Q Consensus       256 d~vid~~g-----~-~~~~~~~~~~l~~~G~~v~~g  285 (364)
                      |+|+....     . ...+.++.+.|+|||+++...
T Consensus       188 D~V~s~~~~~h~~d~~~~l~e~~rvLkpGG~lvi~~  223 (340)
T PLN02244        188 DLVWSMESGEHMPDKRKFVQELARVAAPGGRIIIVT  223 (340)
T ss_pred             cEEEECCchhccCCHHHHHHHHHHHcCCCcEEEEEE
Confidence            99986322     1 357788999999999998764

>PLN03139 formate dehydrogenase; Provisional

Probab=95.18  E-value=0.35  Score=45.31  Aligned_cols=91  Identities=21%  Similarity=0.267  Sum_probs=61.6

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcCCCccEEEE
Q 017916          181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  260 (364)
Q Consensus       181 ~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid  260 (364)
                      .|.+|.|.|.|.+|...++.++.+|+ .|++.+.+....+..+++|+...       .++    .++.    ...|+|+.
T Consensus       198 ~gktVGIVG~G~IG~~vA~~L~afG~-~V~~~d~~~~~~~~~~~~g~~~~-------~~l----~ell----~~sDvV~l  261 (386)
T PLN03139        198 EGKTVGTVGAGRIGRLLLQRLKPFNC-NLLYHDRLKMDPELEKETGAKFE-------EDL----DAML----PKCDVVVI  261 (386)
T ss_pred             CCCEEEEEeecHHHHHHHHHHHHCCC-EEEEECCCCcchhhHhhcCceec-------CCH----HHHH----hhCCEEEE
Confidence            57899999999999999999999999 56777766544444455554321       122    2232    24788887


Q ss_pred             CCCCH-HH---H-HHHHHhcccCCEEEEEcCC
Q 017916          261 CAGFN-KT---M-STALSATRAGGKVCLVGMG  287 (364)
Q Consensus       261 ~~g~~-~~---~-~~~~~~l~~~G~~v~~g~~  287 (364)
                      ++... ++   + ...+..|+++..++.++.+
T Consensus       262 ~lPlt~~T~~li~~~~l~~mk~ga~lIN~aRG  293 (386)
T PLN03139        262 NTPLTEKTRGMFNKERIAKMKKGVLIVNNARG  293 (386)
T ss_pred             eCCCCHHHHHHhCHHHHhhCCCCeEEEECCCC
Confidence            66532 22   1 2467889999988888654

>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional

Probab=95.18  E-value=0.25  Score=44.02  Aligned_cols=82  Identities=24%  Similarity=0.249  Sum_probs=48.4

Q ss_pred             CCCCEEEEEcC---CHHHHHHHHHHHHCCCCEEEEEecCh---hHHH-HHHHcCCCeEEecCC-CcccHHHHHHHHHHHc
Q 017916          180 GPETNVLIMGA---GPIGLVTMLGARAFGAPRIVIVDVDD---YRLS-VAKELGADNIVKVST-NLQDIAEEVEKIQKAM  251 (364)
Q Consensus       180 ~~g~~VLI~Ga---g~~G~~ai~la~~~g~~~vv~~~~~~---~~~~-~~~~lg~~~~~~~~~-~~~~~~~~i~~~~~~~  251 (364)
                      -.+.++||+|+   +++|.+.++.+...|++ |+.+.+++   ++.+ +.++++....+..|- ..++..+.++.+.+. 
T Consensus         8 ~~~k~~lItGas~~~GIG~aia~~la~~G~~-V~l~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~-   85 (272)
T PRK08159          8 MAGKRGLILGVANNRSIAWGIAKACRAAGAE-LAFTYQGDALKKRVEPLAAELGAFVAGHCDVTDEASIDAVFETLEKK-   85 (272)
T ss_pred             ccCCEEEEECCCCCCcHHHHHHHHHHHCCCE-EEEEcCchHHHHHHHHHHHhcCCceEEecCCCCHHHHHHHHHHHHHh-
Confidence            35678999986   48999999999899995 55554443   2222 233455322232222 223333333333322 


Q ss_pred             CCCccEEEECCC
Q 017916          252 GTGIDVSFDCAG  263 (364)
Q Consensus       252 ~~~~d~vid~~g  263 (364)
                      -+++|++|+++|
T Consensus        86 ~g~iD~lv~nAG   97 (272)
T PRK08159         86 WGKLDFVVHAIG   97 (272)
T ss_pred             cCCCcEEEECCc
Confidence            247999999886

>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional

Probab=95.18  E-value=0.26  Score=43.69  Aligned_cols=81  Identities=17%  Similarity=0.199  Sum_probs=47.3

Q ss_pred             CCCEEEEEcC-C--HHHHHHHHHHHHCCCCEEEEEecChhHHHHHHH----cCCCeEEecCC-CcccHHHHHHHHHHHcC
Q 017916          181 PETNVLIMGA-G--PIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKE----LGADNIVKVST-NLQDIAEEVEKIQKAMG  252 (364)
Q Consensus       181 ~g~~VLI~Ga-g--~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~----lg~~~~~~~~~-~~~~~~~~i~~~~~~~~  252 (364)
                      .|.++||+|+ +  ++|.+.++.+...|++ |+.+.+++...+.+++    .+....+..|- ..++..+.+....+. -
T Consensus         5 ~~k~~lITGas~~~GIG~aia~~la~~G~~-vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~-~   82 (262)
T PRK07984          5 SGKRILVTGVASKLSIAYGIAQAMHREGAE-LAFTYQNDKLKGRVEEFAAQLGSDIVLPCDVAEDASIDAMFAELGKV-W   82 (262)
T ss_pred             CCCEEEEeCCCCCccHHHHHHHHHHHCCCE-EEEEecchhHHHHHHHHHhccCCceEeecCCCCHHHHHHHHHHHHhh-c
Confidence            4678999987 4  7999988888889995 5555555321222332    23222222222 223344444443332 2


Q ss_pred             CCccEEEECCC
Q 017916          253 TGIDVSFDCAG  263 (364)
Q Consensus       253 ~~~d~vid~~g  263 (364)
                      +++|++|+++|
T Consensus        83 g~iD~linnAg   93 (262)
T PRK07984         83 PKFDGFVHSIG   93 (262)
T ss_pred             CCCCEEEECCc
Confidence            46999999987

>PRK06179 short chain dehydrogenase; Provisional

Probab=95.17  E-value=0.087  Score=46.76  Aligned_cols=78  Identities=23%  Similarity=0.251  Sum_probs=48.9

Q ss_pred             CCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCe-EEecCCCcccHHHHHHHHHHHcCCCccEEE
Q 017916          182 ETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADN-IVKVSTNLQDIAEEVEKIQKAMGTGIDVSF  259 (364)
Q Consensus       182 g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~d~vi  259 (364)
                      +.+++|+|+ |.+|...++.+...|+ .|++++++.++.+..  .+... ..|+ .+.+++.+.++...+. -+++|++|
T Consensus         4 ~~~vlVtGasg~iG~~~a~~l~~~g~-~V~~~~r~~~~~~~~--~~~~~~~~D~-~d~~~~~~~~~~~~~~-~g~~d~li   78 (270)
T PRK06179          4 SKVALVTGASSGIGRATAEKLARAGY-RVFGTSRNPARAAPI--PGVELLELDV-TDDASVQAAVDEVIAR-AGRIDVLV   78 (270)
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCC-EEEEEeCChhhcccc--CCCeeEEeec-CCHHHHHHHHHHHHHh-CCCCCEEE
Confidence            468999998 9999999998888899 466776665443221  12221 1222 2234444444444332 34799999


Q ss_pred             ECCCC
Q 017916          260 DCAGF  264 (364)
Q Consensus       260 d~~g~  264 (364)
                      +++|.
T Consensus        79 ~~ag~   83 (270)
T PRK06179         79 NNAGV   83 (270)
T ss_pred             ECCCC
Confidence            99884

>PLN03075 nicotianamine synthase; Provisional

Probab=95.17  E-value=0.2  Score=44.97  Aligned_cols=98  Identities=22%  Similarity=0.256  Sum_probs=65.7

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHC-CCCEEEEEecChhHHHHHHHcC-----CCeEEecCCCcccHHHHHHHHHHHcCC
Q 017916          180 GPETNVLIMGAGPIGLVTMLGARAF-GAPRIVIVDVDDYRLSVAKELG-----ADNIVKVSTNLQDIAEEVEKIQKAMGT  253 (364)
Q Consensus       180 ~~g~~VLI~Gag~~G~~ai~la~~~-g~~~vv~~~~~~~~~~~~~~lg-----~~~~~~~~~~~~~~~~~i~~~~~~~~~  253 (364)
                      .++++|+-.|.|+.++.++.+++.. ....+.+++.+++..+.++++-     ...-+.+..  .|..+    ... ..+
T Consensus       122 ~~p~~VldIGcGpgpltaiilaa~~~p~~~~~giD~d~~ai~~Ar~~~~~~~gL~~rV~F~~--~Da~~----~~~-~l~  194 (296)
T PLN03075        122 GVPTKVAFVGSGPLPLTSIVLAKHHLPTTSFHNFDIDPSANDVARRLVSSDPDLSKRMFFHT--ADVMD----VTE-SLK  194 (296)
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHhhhccCccCCcEEEE--Cchhh----ccc-ccC
Confidence            3779999999998899888888654 4447999999998887776532     222122211  12111    110 125


Q ss_pred             CccEEEECC-------CCHHHHHHHHHhcccCCEEEEE
Q 017916          254 GIDVSFDCA-------GFNKTMSTALSATRAGGKVCLV  284 (364)
Q Consensus       254 ~~d~vid~~-------g~~~~~~~~~~~l~~~G~~v~~  284 (364)
                      ++|+||..+       .-.+.+..+.+.|+|||.++.=
T Consensus       195 ~FDlVF~~ALi~~dk~~k~~vL~~l~~~LkPGG~Lvlr  232 (296)
T PLN03075        195 EYDVVFLAALVGMDKEEKVKVIEHLGKHMAPGALLMLR  232 (296)
T ss_pred             CcCEEEEecccccccccHHHHHHHHHHhcCCCcEEEEe
Confidence            799998764       2246778899999999998854

>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=95.17  E-value=0.28  Score=43.21  Aligned_cols=82  Identities=17%  Similarity=0.188  Sum_probs=48.4

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHH---HHHHcCCC-eEEecCCC-cccHHHHHHHHHHHcCCC
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLS---VAKELGAD-NIVKVSTN-LQDIAEEVEKIQKAMGTG  254 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~---~~~~lg~~-~~~~~~~~-~~~~~~~i~~~~~~~~~~  254 (364)
                      .+.++||+|+ +.+|.+.++.+...|++ ++.+.++++..+   .+.+.+.. ..+..+-. .++..+.+++.... .++
T Consensus        14 ~~k~vlItGas~gIG~~ia~~l~~~G~~-v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~-~g~   91 (258)
T PRK06935         14 DGKVAIVTGGNTGLGQGYAVALAKAGAD-IIITTHGTNWDETRRLIEKEGRKVTFVQVDLTKPESAEKVVKEALEE-FGK   91 (258)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCE-EEEEeCCcHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHH-cCC
Confidence            5789999998 99999999999999995 555555422122   22333432 12222222 22333334333332 347


Q ss_pred             ccEEEECCCC
Q 017916          255 IDVSFDCAGF  264 (364)
Q Consensus       255 ~d~vid~~g~  264 (364)
                      +|++|.+.|.
T Consensus        92 id~li~~ag~  101 (258)
T PRK06935         92 IDILVNNAGT  101 (258)
T ss_pred             CCEEEECCCC
Confidence            9999998873

>PRK14103 trans-aconitate 2-methyltransferase; Provisional

Probab=95.16  E-value=0.34  Score=42.72  Aligned_cols=98  Identities=22%  Similarity=0.266  Sum_probs=67.9

Q ss_pred             HHHHcCCCCCCEEEEEcCCHHHHHHHHHHHHC-CCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHc
Q 017916          173 ACRRANIGPETNVLIMGAGPIGLVTMLGARAF-GAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAM  251 (364)
Q Consensus       173 ~l~~~~~~~g~~VLI~Gag~~G~~ai~la~~~-g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~  251 (364)
                      .+......++++||=.|+|. |..+..+++.. +. .+++++.++...+.+++.+.+.. .     .+.    ..+.  .
T Consensus        21 ll~~l~~~~~~~vLDlGcG~-G~~~~~l~~~~p~~-~v~gvD~s~~~~~~a~~~~~~~~-~-----~d~----~~~~--~   86 (255)
T PRK14103         21 LLARVGAERARRVVDLGCGP-GNLTRYLARRWPGA-VIEALDSSPEMVAAARERGVDAR-T-----GDV----RDWK--P   86 (255)
T ss_pred             HHHhCCCCCCCEEEEEcCCC-CHHHHHHHHHCCCC-EEEEEECCHHHHHHHHhcCCcEE-E-----cCh----hhCC--C
Confidence            34556678889999998755 66777888776 44 79999999988888877654422 1     111    1121  1


Q ss_pred             CCCccEEEECCC-----C-HHHHHHHHHhcccCCEEEEE
Q 017916          252 GTGIDVSFDCAG-----F-NKTMSTALSATRAGGKVCLV  284 (364)
Q Consensus       252 ~~~~d~vid~~g-----~-~~~~~~~~~~l~~~G~~v~~  284 (364)
                      ...+|+|+....     . ...+..+.+.|+|+|+++..
T Consensus        87 ~~~fD~v~~~~~l~~~~d~~~~l~~~~~~LkpgG~l~~~  125 (255)
T PRK14103         87 KPDTDVVVSNAALQWVPEHADLLVRWVDELAPGSWIAVQ  125 (255)
T ss_pred             CCCceEEEEehhhhhCCCHHHHHHHHHHhCCCCcEEEEE
Confidence            357999987432     2 45677889999999999865

>PRK07890 short chain dehydrogenase; Provisional

Probab=95.16  E-value=0.27  Score=43.12  Aligned_cols=82  Identities=20%  Similarity=0.175  Sum_probs=50.3

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHH-HHc---CCC-eEEecCC-CcccHHHHHHHHHHHcCC
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KEL---GAD-NIVKVST-NLQDIAEEVEKIQKAMGT  253 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~-~~l---g~~-~~~~~~~-~~~~~~~~i~~~~~~~~~  253 (364)
                      ++.++||+|+ |.+|...+..+...|+ .|+.++++.++.+.+ +++   +.. ..+..+- ..+++...++...+.. +
T Consensus         4 ~~k~vlItGa~~~IG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-g   81 (258)
T PRK07890          4 KGKVVVVSGVGPGLGRTLAVRAARAGA-DVVLAARTAERLDEVAAEIDDLGRRALAVPTDITDEDQCANLVALALERF-G   81 (258)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHhCCceEEEecCCCCHHHHHHHHHHHHHHc-C
Confidence            5678999998 9999999999999999 567777766554332 222   322 1222222 2233333333333322 4


Q ss_pred             CccEEEECCCC
Q 017916          254 GIDVSFDCAGF  264 (364)
Q Consensus       254 ~~d~vid~~g~  264 (364)
                      ++|++|.+.|.
T Consensus        82 ~~d~vi~~ag~   92 (258)
T PRK07890         82 RVDALVNNAFR   92 (258)
T ss_pred             CccEEEECCcc
Confidence            68999998863

>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B

Probab=95.15  E-value=0.18  Score=37.68  Aligned_cols=87  Identities=18%  Similarity=0.281  Sum_probs=56.7

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcCCCccEEEE
Q 017916          181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  260 (364)
Q Consensus       181 ~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid  260 (364)
                      .|.+|||.|+|.+|..-++.+...|+ .+.+++...   +..+  +......     ..+.+        .-.++++||.
T Consensus         6 ~~~~vlVvGgG~va~~k~~~Ll~~gA-~v~vis~~~---~~~~--~~i~~~~-----~~~~~--------~l~~~~lV~~   66 (103)
T PF13241_consen    6 KGKRVLVVGGGPVAARKARLLLEAGA-KVTVISPEI---EFSE--GLIQLIR-----REFEE--------DLDGADLVFA   66 (103)
T ss_dssp             TT-EEEEEEESHHHHHHHHHHCCCTB-EEEEEESSE---HHHH--TSCEEEE-----SS-GG--------GCTTESEEEE
T ss_pred             CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEECCch---hhhh--hHHHHHh-----hhHHH--------HHhhheEEEe
Confidence            57899999999999999999999999 566665554   2222  2222222     12111        1357999999


Q ss_pred             CCCCHHHHHHHHHhcccCCEEEEEcC
Q 017916          261 CAGFNKTMSTALSATRAGGKVCLVGM  286 (364)
Q Consensus       261 ~~g~~~~~~~~~~~l~~~G~~v~~g~  286 (364)
                      +.+.++.-..+.+..+..|.++....
T Consensus        67 at~d~~~n~~i~~~a~~~~i~vn~~D   92 (103)
T PF13241_consen   67 ATDDPELNEAIYADARARGILVNVVD   92 (103)
T ss_dssp             -SS-HHHHHHHHHHHHHTTSEEEETT
T ss_pred             cCCCHHHHHHHHHHHhhCCEEEEECC
Confidence            99976666667777777888887753

>PRK08226 short chain dehydrogenase; Provisional

Probab=95.15  E-value=0.28  Score=43.24  Aligned_cols=81  Identities=23%  Similarity=0.304  Sum_probs=49.1

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHc---CCCe-EEecCCC-cccHHHHHHHHHHHcCCC
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKEL---GADN-IVKVSTN-LQDIAEEVEKIQKAMGTG  254 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~l---g~~~-~~~~~~~-~~~~~~~i~~~~~~~~~~  254 (364)
                      .+.++||+|+ |.+|...+..+...|+ .|+.++++.+..+..+++   +... .+..+-. ..+..+.+..+... -++
T Consensus         5 ~~~~~lItG~s~giG~~la~~l~~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~-~~~   82 (263)
T PRK08226          5 TGKTALITGALQGIGEGIARVFARHGA-NLILLDISPEIEKLADELCGRGHRCTAVVADVRDPASVAAAIKRAKEK-EGR   82 (263)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEecCCHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHH-cCC
Confidence            4679999998 9999999999988999 467776665433333322   3221 2222221 12333333333322 347


Q ss_pred             ccEEEECCC
Q 017916          255 IDVSFDCAG  263 (364)
Q Consensus       255 ~d~vid~~g  263 (364)
                      +|++|.++|
T Consensus        83 id~vi~~ag   91 (263)
T PRK08226         83 IDILVNNAG   91 (263)
T ss_pred             CCEEEECCC
Confidence            999999887

>PRK14903 16S rRNA methyltransferase B; Provisional

Probab=95.15  E-value=0.56  Score=44.85  Aligned_cols=104  Identities=18%  Similarity=0.231  Sum_probs=65.3

Q ss_pred             HHcCCCCCCEEEEEcCCHHHHHHHHHHHHCC-CCEEEEEecChhHHHHHH----HcCCCeEEecCCCcccHHHHHHHHHH
Q 017916          175 RRANIGPETNVLIMGAGPIGLVTMLGARAFG-APRIVIVDVDDYRLSVAK----ELGADNIVKVSTNLQDIAEEVEKIQK  249 (364)
Q Consensus       175 ~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g-~~~vv~~~~~~~~~~~~~----~lg~~~~~~~~~~~~~~~~~i~~~~~  249 (364)
                      ...++++|++||=.|+|+ |.-+.+++..++ ...|++++.++++.+.++    ++|...+.....+..+    +...  
T Consensus       231 ~~l~~~~g~~VLD~cagp-Ggkt~~la~~~~~~g~V~a~Dis~~rl~~~~~n~~r~g~~~v~~~~~Da~~----l~~~--  303 (431)
T PRK14903        231 LLMELEPGLRVLDTCAAP-GGKTTAIAELMKDQGKILAVDISREKIQLVEKHAKRLKLSSIEIKIADAER----LTEY--  303 (431)
T ss_pred             HHhCCCCCCEEEEeCCCc-cHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHcCCCeEEEEECchhh----hhhh--
Confidence            346778999998887654 555666777652 337999999999887764    4676542221111111    1111  


Q ss_pred             HcCCCccEEEE---CCCCH-------------------------HHHHHHHHhcccCCEEEEEcC
Q 017916          250 AMGTGIDVSFD---CAGFN-------------------------KTMSTALSATRAGGKVCLVGM  286 (364)
Q Consensus       250 ~~~~~~d~vid---~~g~~-------------------------~~~~~~~~~l~~~G~~v~~g~  286 (364)
                       ..+.||.|+-   |+|.+                         +.+..+++.|++||+++....
T Consensus       304 -~~~~fD~Vl~DaPCsg~G~~~~~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvYsTC  367 (431)
T PRK14903        304 -VQDTFDRILVDAPCTSLGTARNHPEVLRRVNKEDFKKLSEIQLRIVSQAWKLLEKGGILLYSTC  367 (431)
T ss_pred             -hhccCCEEEECCCCCCCccccCChHHHHhCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEEC
Confidence             1346999873   44431                         236678899999999887653

>PTZ00098 phosphoethanolamine N-methyltransferase; Provisional

Probab=95.15  E-value=0.35  Score=42.89  Aligned_cols=105  Identities=17%  Similarity=0.222  Sum_probs=66.6

Q ss_pred             HHHHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCC-eEEecCCCcccHHHHHHHHHHHc
Q 017916          173 ACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGAD-NIVKVSTNLQDIAEEVEKIQKAM  251 (364)
Q Consensus       173 ~l~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~-~~~~~~~~~~~~~~~i~~~~~~~  251 (364)
                      .+...+++++.+||=.|+|. |..+..+++..++ .+++++.+++..+.+++.... ..+.+..  .++.+    . ...
T Consensus        44 ~l~~l~l~~~~~VLDiGcG~-G~~a~~la~~~~~-~v~giD~s~~~~~~a~~~~~~~~~i~~~~--~D~~~----~-~~~  114 (263)
T PTZ00098         44 ILSDIELNENSKVLDIGSGL-GGGCKYINEKYGA-HVHGVDICEKMVNIAKLRNSDKNKIEFEA--NDILK----K-DFP  114 (263)
T ss_pred             HHHhCCCCCCCEEEEEcCCC-ChhhHHHHhhcCC-EEEEEECCHHHHHHHHHHcCcCCceEEEE--CCccc----C-CCC
Confidence            34667889999999998754 5566777777777 799999998887777653211 1111100  11110    0 001


Q ss_pred             CCCccEEEEC--C---C---CHHHHHHHHHhcccCCEEEEEcC
Q 017916          252 GTGIDVSFDC--A---G---FNKTMSTALSATRAGGKVCLVGM  286 (364)
Q Consensus       252 ~~~~d~vid~--~---g---~~~~~~~~~~~l~~~G~~v~~g~  286 (364)
                      ...+|+|+..  .   .   -...++.+.+.|+|+|+++....
T Consensus       115 ~~~FD~V~s~~~l~h~~~~d~~~~l~~i~r~LkPGG~lvi~d~  157 (263)
T PTZ00098        115 ENTFDMIYSRDAILHLSYADKKKLFEKCYKWLKPNGILLITDY  157 (263)
T ss_pred             CCCeEEEEEhhhHHhCCHHHHHHHHHHHHHHcCCCcEEEEEEe
Confidence            3469999862  1   1   13467788999999999998753

>PRK06172 short chain dehydrogenase; Provisional

Probab=95.13  E-value=0.28  Score=42.92  Aligned_cols=82  Identities=26%  Similarity=0.334  Sum_probs=49.7

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHH----HHHcCCC-eEEecCCC-cccHHHHHHHHHHHcCC
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSV----AKELGAD-NIVKVSTN-LQDIAEEVEKIQKAMGT  253 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~----~~~lg~~-~~~~~~~~-~~~~~~~i~~~~~~~~~  253 (364)
                      ++.++||+|+ |.+|...++.+...|+ .|+.+.++.++.+.    +++.+.. ..+..+-. ..++.+.+....... +
T Consensus         6 ~~k~ilItGas~~iG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~-g   83 (253)
T PRK06172          6 SGKVALVTGGAAGIGRATALAFAREGA-KVVVADRDAAGGEETVALIREAGGEALFVACDVTRDAEVKALVEQTIAAY-G   83 (253)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHh-C
Confidence            4679999998 9999999998888898 56777776655332    2333432 12222221 223333333333222 4


Q ss_pred             CccEEEECCCC
Q 017916          254 GIDVSFDCAGF  264 (364)
Q Consensus       254 ~~d~vid~~g~  264 (364)
                      ++|++|.+.|.
T Consensus        84 ~id~li~~ag~   94 (253)
T PRK06172         84 RLDYAFNNAGI   94 (253)
T ss_pred             CCCEEEECCCC
Confidence            78999998873

>PF01209 Ubie_methyltran: ubiE/COQ5 methyltransferase family; InterPro: IPR004033 A number of methyltransferases have been shown to share regions of similarities []

Probab=95.12  E-value=0.12  Score=45.02  Aligned_cols=105  Identities=24%  Similarity=0.360  Sum_probs=62.6

Q ss_pred             HHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCC-CEEEEEecChhHHHHHHH----cCCCeEEecCCCcccHHHHHHHHHH
Q 017916          175 RRANIGPETNVLIMGAGPIGLVTMLGARAFGA-PRIVIVDVDDYRLSVAKE----LGADNIVKVSTNLQDIAEEVEKIQK  249 (364)
Q Consensus       175 ~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~-~~vv~~~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~i~~~~~  249 (364)
                      +....++|++||=.|+|. |..+..+++..+. ..|+++|.+++-.+.+++    .+...+.-...+.+++.     +  
T Consensus        41 ~~~~~~~g~~vLDv~~Gt-G~~~~~l~~~~~~~~~v~~vD~s~~ML~~a~~k~~~~~~~~i~~v~~da~~lp-----~--  112 (233)
T PF01209_consen   41 KLLGLRPGDRVLDVACGT-GDVTRELARRVGPNGKVVGVDISPGMLEVARKKLKREGLQNIEFVQGDAEDLP-----F--  112 (233)
T ss_dssp             HHHT--S--EEEEET-TT-SHHHHHHGGGSS---EEEEEES-HHHHHHHHHHHHHTT--SEEEEE-BTTB-------S--
T ss_pred             hccCCCCCCEEEEeCCCh-HHHHHHHHHHCCCccEEEEecCCHHHHHHHHHHHHhhCCCCeeEEEcCHHHhc-----C--
Confidence            446778999999987644 6678888888764 379999999988877764    23322211111112211     0  


Q ss_pred             HcCCCccEEEECCCC------HHHHHHHHHhcccCCEEEEEcCCC
Q 017916          250 AMGTGIDVSFDCAGF------NKTMSTALSATRAGGKVCLVGMGH  288 (364)
Q Consensus       250 ~~~~~~d~vid~~g~------~~~~~~~~~~l~~~G~~v~~g~~~  288 (364)
                       ....+|+|..+.|-      ...+.++.+.|+|||+++.+..+.
T Consensus       113 -~d~sfD~v~~~fglrn~~d~~~~l~E~~RVLkPGG~l~ile~~~  156 (233)
T PF01209_consen  113 -PDNSFDAVTCSFGLRNFPDRERALREMYRVLKPGGRLVILEFSK  156 (233)
T ss_dssp             --TT-EEEEEEES-GGG-SSHHHHHHHHHHHEEEEEEEEEEEEEB
T ss_pred             -CCCceeEEEHHhhHHhhCCHHHHHHHHHHHcCCCeEEEEeeccC
Confidence             13579999877653      467889999999999999887543

Apart from the ubiquinone/menaquinone biosynthesis methyltransferases (for example, the C-methyltransferase from the ubiE gene of Escherichia coli), the ubiquinone biosynthesis methyltransferases (for example, the C-methyltransferase from the COQ5 gene of Saccharomyces cerevisiae) and the menaquinone biosynthesis methyltransferases (for example, the C-methyltransferase from the MENH gene of Bacillus subtilis), this family also includes methyltransferases involved in biotin and sterol biosynthesis and in phosphatidylethanolamine methylation.; GO: 0008168 methyltransferase activity; PDB: 1VL5_C.

>PRK06953 short chain dehydrogenase; Provisional

Probab=95.12  E-value=0.18  Score=43.22  Aligned_cols=77  Identities=27%  Similarity=0.324  Sum_probs=48.7

Q ss_pred             CEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHH-HcCCCccEEEE
Q 017916          183 TNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQK-AMGTGIDVSFD  260 (364)
Q Consensus       183 ~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~-~~~~~~d~vid  260 (364)
                      .+++|+|+ |.+|...++.+...|+ .++.++++.++.+.++..+.. .+..+-...   +.++++.. ..+.++|++|.
T Consensus         2 ~~vlvtG~sg~iG~~la~~L~~~G~-~v~~~~r~~~~~~~~~~~~~~-~~~~D~~~~---~~v~~~~~~~~~~~~d~vi~   76 (222)
T PRK06953          2 KTVLIVGASRGIGREFVRQYRADGW-RVIATARDAAALAALQALGAE-ALALDVADP---ASVAGLAWKLDGEALDAAVY   76 (222)
T ss_pred             ceEEEEcCCCchhHHHHHHHHhCCC-EEEEEECCHHHHHHHHhccce-EEEecCCCH---HHHHHHHHHhcCCCCCEEEE
Confidence            47899997 9999999988878898 567777777766666555543 222222221   12223221 12347999999


Q ss_pred             CCCC
Q 017916          261 CAGF  264 (364)
Q Consensus       261 ~~g~  264 (364)
                      +.|.
T Consensus        77 ~ag~   80 (222)
T PRK06953         77 VAGV   80 (222)
T ss_pred             CCCc
Confidence            8774

>TIGR00138 gidB 16S rRNA methyltransferase GidB

Probab=95.11  E-value=0.21  Score=41.60  Aligned_cols=94  Identities=20%  Similarity=0.277  Sum_probs=58.9

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHH----HcCCCeEEecCCCcccHHHHHHHHHHHcCCCcc
Q 017916          181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAK----ELGADNIVKVSTNLQDIAEEVEKIQKAMGTGID  256 (364)
Q Consensus       181 ~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~----~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d  256 (364)
                      ++++||-.|+|. |..++.+++......|++++.+++..+.++    +.+...+.....   +..+    +.  ....+|
T Consensus        42 ~~~~vLDiGcGt-G~~s~~la~~~~~~~V~~iD~s~~~~~~a~~~~~~~~~~~i~~i~~---d~~~----~~--~~~~fD  111 (181)
T TIGR00138        42 DGKKVIDIGSGA-GFPGIPLAIARPELKLTLLESNHKKVAFLREVKAELGLNNVEIVNG---RAED----FQ--HEEQFD  111 (181)
T ss_pred             CCCeEEEecCCC-CccHHHHHHHCCCCeEEEEeCcHHHHHHHHHHHHHhCCCCeEEEec---chhh----cc--ccCCcc
Confidence            378999888654 556666666654447999999987665543    455543221111   2211    11  135799


Q ss_pred             EEEECC-CC-HHHHHHHHHhcccCCEEEEE
Q 017916          257 VSFDCA-GF-NKTMSTALSATRAGGKVCLV  284 (364)
Q Consensus       257 ~vid~~-g~-~~~~~~~~~~l~~~G~~v~~  284 (364)
                      +|+... .. .+.++.+.+.|+++|+++..
T Consensus       112 ~I~s~~~~~~~~~~~~~~~~LkpgG~lvi~  141 (181)
T TIGR00138       112 VITSRALASLNVLLELTLNLLKVGGYFLAY  141 (181)
T ss_pred             EEEehhhhCHHHHHHHHHHhcCCCCEEEEE
Confidence            988542 21 45667788999999999876

GidB (glucose-inhibited division protein B) appears to be present and in a single copy in nearly all complete eubacterial genomes. It is missing only from some obligate intracellular species of various lineages (Chlamydiae, Ehrlichia, Wolbachia, Anaplasma, Buchnera, etc.). GidB shows a methytransferase fold in its the crystal structure, and acts as a 7-methylguanosine (m(7)G) methyltransferase, apparently specific to 16S rRNA.

>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]

Probab=95.10  E-value=0.081  Score=47.21  Aligned_cols=47  Identities=28%  Similarity=0.339  Sum_probs=39.6

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHH-HHcC
Q 017916          180 GPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KELG  226 (364)
Q Consensus       180 ~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~-~~lg  226 (364)
                      .+|++++|.|+|+.+.+++.-++..|++.+.++.++.+|.+.+ +.++
T Consensus       124 ~~~~~vlilGAGGAarAv~~aL~~~g~~~i~V~NRt~~ra~~La~~~~  171 (283)
T COG0169         124 VTGKRVLILGAGGAARAVAFALAEAGAKRITVVNRTRERAEELADLFG  171 (283)
T ss_pred             cCCCEEEEECCcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhh
Confidence            4689999999999999999999999998899998888886554 4444

>PLN02253 xanthoxin dehydrogenase

Probab=95.10  E-value=0.22  Score=44.50  Aligned_cols=82  Identities=22%  Similarity=0.276  Sum_probs=49.7

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHH-HHHHcCC--C-eEEecCC-CcccHHHHHHHHHHHcCCC
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLS-VAKELGA--D-NIVKVST-NLQDIAEEVEKIQKAMGTG  254 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~-~~~~lg~--~-~~~~~~~-~~~~~~~~i~~~~~~~~~~  254 (364)
                      .+.++||+|+ |.+|.+.++.+...|+ .|+.++.++++.+ +..+++.  . ..+..|- ..+++.+.+..+.+. -++
T Consensus        17 ~~k~~lItGas~gIG~~la~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~-~g~   94 (280)
T PLN02253         17 LGKVALVTGGATGIGESIVRLFHKHGA-KVCIVDLQDDLGQNVCDSLGGEPNVCFFHCDVTVEDDVSRAVDFTVDK-FGT   94 (280)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhcCCCceEEEEeecCCHHHHHHHHHHHHHH-hCC
Confidence            4678999998 9999999988888899 5666666554433 3334432  1 1222221 223333444444332 247


Q ss_pred             ccEEEECCCC
Q 017916          255 IDVSFDCAGF  264 (364)
Q Consensus       255 ~d~vid~~g~  264 (364)
                      +|++|+++|.
T Consensus        95 id~li~~Ag~  104 (280)
T PLN02253         95 LDIMVNNAGL  104 (280)
T ss_pred             CCEEEECCCc
Confidence            9999998873

>PRK07985 oxidoreductase; Provisional

Probab=95.09  E-value=0.61  Score=42.07  Aligned_cols=81  Identities=20%  Similarity=0.215  Sum_probs=46.6

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecC--hhHHHH----HHHcCCCe-EEecCCC-cccHHHHHHHHHHHc
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVD--DYRLSV----AKELGADN-IVKVSTN-LQDIAEEVEKIQKAM  251 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~--~~~~~~----~~~lg~~~-~~~~~~~-~~~~~~~i~~~~~~~  251 (364)
                      ++.++||+|+ +.+|.+.++.+...|++ |+.+..+  .++.+.    +++.+... .+..+-. .++..+.++..... 
T Consensus        48 ~~k~vlITGas~gIG~aia~~L~~~G~~-Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-  125 (294)
T PRK07985         48 KDRKALVTGGDSGIGRAAAIAYAREGAD-VAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSDEKFARSLVHEAHKA-  125 (294)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHCCCE-EEEecCCcchhhHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHH-
Confidence            5679999998 99999999999999995 4554332  222222    22334321 2222222 23333333433332 


Q ss_pred             CCCccEEEECCC
Q 017916          252 GTGIDVSFDCAG  263 (364)
Q Consensus       252 ~~~~d~vid~~g  263 (364)
                      -+++|+++.+.|
T Consensus       126 ~g~id~lv~~Ag  137 (294)
T PRK07985        126 LGGLDIMALVAG  137 (294)
T ss_pred             hCCCCEEEECCC
Confidence            347999998876

>PRK05875 short chain dehydrogenase; Provisional

Probab=95.09  E-value=0.3  Score=43.47  Aligned_cols=81  Identities=22%  Similarity=0.321  Sum_probs=48.8

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHH-HHHcC-----CC-eEEecCC-CcccHHHHHHHHHHHc
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSV-AKELG-----AD-NIVKVST-NLQDIAEEVEKIQKAM  251 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~-~~~lg-----~~-~~~~~~~-~~~~~~~~i~~~~~~~  251 (364)
                      ++.++||+|+ |.+|...++.+...|+ .|+.+.++.++.+. .+++.     .. .++..+- ..+++.+.++...+. 
T Consensus         6 ~~k~vlItGasg~IG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-   83 (276)
T PRK05875          6 QDRTYLVTGGGSGIGKGVAAGLVAAGA-AVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDEDQVARAVDAATAW-   83 (276)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCHHHHHHHHHHHHHH-
Confidence            4679999998 9999999999999999 56777666554332 22221     11 1221221 122333333333222 


Q ss_pred             CCCccEEEECCC
Q 017916          252 GTGIDVSFDCAG  263 (364)
Q Consensus       252 ~~~~d~vid~~g  263 (364)
                      .+++|++|.++|
T Consensus        84 ~~~~d~li~~ag   95 (276)
T PRK05875         84 HGRLHGVVHCAG   95 (276)
T ss_pred             cCCCCEEEECCC
Confidence            247899999887

>PRK08213 gluconate 5-dehydrogenase; Provisional

Probab=95.07  E-value=0.31  Score=42.89  Aligned_cols=82  Identities=23%  Similarity=0.264  Sum_probs=50.1

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHH----HcCCC-eEEecCCC-cccHHHHHHHHHHHcCC
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAK----ELGAD-NIVKVSTN-LQDIAEEVEKIQKAMGT  253 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~----~lg~~-~~~~~~~~-~~~~~~~i~~~~~~~~~  253 (364)
                      ++.++||+|+ |.+|...++.+...|+ .|+.++++.++.+...    ..+.. ..+..+-. .+++.+.+..+... .+
T Consensus        11 ~~k~ilItGa~g~IG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~Dl~d~~~i~~~~~~~~~~-~~   88 (259)
T PRK08213         11 SGKTALVTGGSRGLGLQIAEALGEAGA-RVVLSARKAEELEEAAAHLEALGIDALWIAADVADEADIERLAEETLER-FG   88 (259)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH-hC
Confidence            5689999998 9999999999988999 5677777766544332    22222 12222221 22333333333322 24


Q ss_pred             CccEEEECCCC
Q 017916          254 GIDVSFDCAGF  264 (364)
Q Consensus       254 ~~d~vid~~g~  264 (364)
                      ++|.+|.++|.
T Consensus        89 ~id~vi~~ag~   99 (259)
T PRK08213         89 HVDILVNNAGA   99 (259)
T ss_pred             CCCEEEECCCC
Confidence            79999998873

>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional

Probab=95.06  E-value=0.25  Score=43.12  Aligned_cols=83  Identities=20%  Similarity=0.214  Sum_probs=48.8

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHH-H---HHHcCCCe-EEecCC-CcccHHHHHHHHHHHcCC
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLS-V---AKELGADN-IVKVST-NLQDIAEEVEKIQKAMGT  253 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~-~---~~~lg~~~-~~~~~~-~~~~~~~~i~~~~~~~~~  253 (364)
                      ++.++||+|+ |.+|...+..+...|+++++...++.++.+ .   ++..+... .+..+- ..++..+.++...+.. +
T Consensus         3 ~~~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~   81 (250)
T PRK08063          3 SGKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEALGRKALAVKANVGDVEKIKEMFAQIDEEF-G   81 (250)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHc-C
Confidence            4678999998 999999999999999965444445544432 2   22334321 222222 2233333333333322 4


Q ss_pred             CccEEEECCCC
Q 017916          254 GIDVSFDCAGF  264 (364)
Q Consensus       254 ~~d~vid~~g~  264 (364)
                      ++|++|.+.|.
T Consensus        82 ~id~vi~~ag~   92 (250)
T PRK08063         82 RLDVFVNNAAS   92 (250)
T ss_pred             CCCEEEECCCC
Confidence            69999998873

>PRK12743 oxidoreductase; Provisional

Probab=95.04  E-value=0.28  Score=43.12  Aligned_cols=81  Identities=19%  Similarity=0.188  Sum_probs=47.5

Q ss_pred             CCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHH----HHHHcCCC-eEEecCCC-cccHHHHHHHHHHHcCCC
Q 017916          182 ETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLS----VAKELGAD-NIVKVSTN-LQDIAEEVEKIQKAMGTG  254 (364)
Q Consensus       182 g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~----~~~~lg~~-~~~~~~~~-~~~~~~~i~~~~~~~~~~  254 (364)
                      +.+|||+|+ +.+|..+++.+...|+++++...++.++.+    .++..+.. ..+..+-. .+++.+.+.++... -++
T Consensus         2 ~k~vlItGas~giG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-~~~   80 (256)
T PRK12743          2 AQVAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSDLPEGAQALDKLIQR-LGR   80 (256)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHH-cCC
Confidence            468999998 999999999999999964444344443322    22334432 22222221 23333333333332 247


Q ss_pred             ccEEEECCC
Q 017916          255 IDVSFDCAG  263 (364)
Q Consensus       255 ~d~vid~~g  263 (364)
                      +|++|.+.|
T Consensus        81 id~li~~ag   89 (256)
T PRK12743         81 IDVLVNNAG   89 (256)
T ss_pred             CCEEEECCC
Confidence            999999887

>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional

Probab=95.02  E-value=0.3  Score=42.91  Aligned_cols=80  Identities=15%  Similarity=0.233  Sum_probs=47.3

Q ss_pred             CCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHH-HH----cCCC--eEEecCCCc-ccHHHHHHHHHHHcC
Q 017916          182 ETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KE----LGAD--NIVKVSTNL-QDIAEEVEKIQKAMG  252 (364)
Q Consensus       182 g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~-~~----lg~~--~~~~~~~~~-~~~~~~i~~~~~~~~  252 (364)
                      +.+|||+|+ |.+|.+.+..+...|+ .++.++++.++.+.. .+    .+..  ..+..+-.+ ++....+.++... -
T Consensus         2 ~k~ilItG~~~~IG~~la~~l~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~-~   79 (259)
T PRK12384          2 NQVAVVIGGGQTLGAFLCHGLAEEGY-RVAVADINSEKAANVAQEINAEYGEGMAYGFGADATSEQSVLALSRGVDEI-F   79 (259)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHHHHH-c
Confidence            468999998 9999999998888899 567776665543322 22    2211  122222221 2223333333222 2


Q ss_pred             CCccEEEECCC
Q 017916          253 TGIDVSFDCAG  263 (364)
Q Consensus       253 ~~~d~vid~~g  263 (364)
                      +++|++|.+.|
T Consensus        80 ~~id~vv~~ag   90 (259)
T PRK12384         80 GRVDLLVYNAG   90 (259)
T ss_pred             CCCCEEEECCC
Confidence            47999999887

>PRK06138 short chain dehydrogenase; Provisional

Probab=95.00  E-value=0.25  Score=43.19  Aligned_cols=82  Identities=23%  Similarity=0.246  Sum_probs=48.9

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHH-HHHc--CCC-eEEecCCC-cccHHHHHHHHHHHcCCC
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSV-AKEL--GAD-NIVKVSTN-LQDIAEEVEKIQKAMGTG  254 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~-~~~l--g~~-~~~~~~~~-~~~~~~~i~~~~~~~~~~  254 (364)
                      ++.++||+|+ |.+|...++.+...|+ .|+.+.++.++.+. ...+  +.. ..+..+-. .++..+.+..+.+. -++
T Consensus         4 ~~k~~lItG~sg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~-~~~   81 (252)
T PRK06138          4 AGRVAIVTGAGSGIGRATAKLFAREGA-RVVVADRDAEAAERVAAAIAAGGRAFARQGDVGSAEAVEALVDFVAAR-WGR   81 (252)
T ss_pred             CCcEEEEeCCCchHHHHHHHHHHHCCC-eEEEecCCHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHH-cCC
Confidence            4678999998 9999999988888898 56666666554332 2222  221 22222222 22333333333322 247


Q ss_pred             ccEEEECCCC
Q 017916          255 IDVSFDCAGF  264 (364)
Q Consensus       255 ~d~vid~~g~  264 (364)
                      +|++|.+.|.
T Consensus        82 id~vi~~ag~   91 (252)
T PRK06138         82 LDVLVNNAGF   91 (252)
T ss_pred             CCEEEECCCC
Confidence            9999998883

>TIGR03840 TMPT_Se_Te thiopurine S-methyltransferase, Se/Te detoxification family

Probab=94.96  E-value=0.48  Score=40.60  Aligned_cols=101  Identities=18%  Similarity=0.214  Sum_probs=61.6

Q ss_pred             CCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHH-HHcCCCeEE------------ecCCCcccHHHHHH
Q 017916          179 IGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KELGADNIV------------KVSTNLQDIAEEVE  245 (364)
Q Consensus       179 ~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~-~~lg~~~~~------------~~~~~~~~~~~~i~  245 (364)
                      ..++.+||+.|+|. |.-++.||. .|. .|++++.++...+.+ ++.+.....            .+.-.-.|+.+   
T Consensus        32 ~~~~~rvLd~GCG~-G~da~~LA~-~G~-~V~gvD~S~~Ai~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~---  105 (213)
T TIGR03840        32 LPAGARVFVPLCGK-SLDLAWLAE-QGH-RVLGVELSEIAVEQFFAENGLTPTVTQQGEFTRYRAGNIEIFCGDFFA---  105 (213)
T ss_pred             CCCCCeEEEeCCCc-hhHHHHHHh-CCC-eEEEEeCCHHHHHHHHHHcCCCcceeccccceeeecCceEEEEccCCC---
Confidence            35778999998866 778888875 699 699999999877764 333321100            00000001100   


Q ss_pred             HHHHHcCCCccEEEECCCC--------HHHHHHHHHhcccCCEEEEEcC
Q 017916          246 KIQKAMGTGIDVSFDCAGF--------NKTMSTALSATRAGGKVCLVGM  286 (364)
Q Consensus       246 ~~~~~~~~~~d~vid~~g~--------~~~~~~~~~~l~~~G~~v~~g~  286 (364)
                       +.......+|.++|+..-        ...++.+.++|+|+|+++....
T Consensus       106 -~~~~~~~~fD~i~D~~~~~~l~~~~R~~~~~~l~~lLkpgG~~ll~~~  153 (213)
T TIGR03840       106 -LTAADLGPVDAVYDRAALIALPEEMRQRYAAHLLALLPPGARQLLITL  153 (213)
T ss_pred             -CCcccCCCcCEEEechhhccCCHHHHHHHHHHHHHHcCCCCeEEEEEE
Confidence             000012468999996431        2457789999999998776654

Members of this family are thiopurine S-methyltransferase from a branch in which at least some member proteins can perform selenium methylation as a means to detoxify selenium, or perform a related detoxification of tellurium. Note that the EC number definition does not specify a particular thiopurine, but rather represents a class of activity.

>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=94.95  E-value=0.33  Score=42.04  Aligned_cols=82  Identities=23%  Similarity=0.287  Sum_probs=50.3

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHH----HHcCCCeEE-ecCC-CcccHHHHHHHHHHHcCC
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA----KELGADNIV-KVST-NLQDIAEEVEKIQKAMGT  253 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~----~~lg~~~~~-~~~~-~~~~~~~~i~~~~~~~~~  253 (364)
                      ++.+|||+|+ |.+|...++.+...|.+ |+++.+++++.+..    +..+....+ ..+- ...++.+.++.+... -.
T Consensus         4 ~~~~ilItGasg~iG~~l~~~l~~~g~~-v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~   81 (246)
T PRK05653          4 QGKTALVTGASRGIGRAIALRLAADGAK-VVIYDSNEEAAEALAAELRAAGGEARVLVFDVSDEAAVRALIEAAVEA-FG   81 (246)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCE-EEEEeCChhHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHH-hC
Confidence            3578999998 99999999998888995 77777776654332    233433211 1111 123333444433322 24


Q ss_pred             CccEEEECCCC
Q 017916          254 GIDVSFDCAGF  264 (364)
Q Consensus       254 ~~d~vid~~g~  264 (364)
                      ++|.+|.++|.
T Consensus        82 ~id~vi~~ag~   92 (246)
T PRK05653         82 ALDILVNNAGI   92 (246)
T ss_pred             CCCEEEECCCc
Confidence            68999998863

>PRK14904 16S rRNA methyltransferase B; Provisional

Probab=94.95  E-value=0.51  Score=45.36  Aligned_cols=104  Identities=24%  Similarity=0.321  Sum_probs=64.1

Q ss_pred             HHHHcCCCCCCEEEEEcCCHHHHHHHHHHHHC-CCCEEEEEecChhHHHHHH----HcCCCeEEecCCCcccHHHHHHHH
Q 017916          173 ACRRANIGPETNVLIMGAGPIGLVTMLGARAF-GAPRIVIVDVDDYRLSVAK----ELGADNIVKVSTNLQDIAEEVEKI  247 (364)
Q Consensus       173 ~l~~~~~~~g~~VLI~Gag~~G~~ai~la~~~-g~~~vv~~~~~~~~~~~~~----~lg~~~~~~~~~~~~~~~~~i~~~  247 (364)
                      .+.....++|++||=.|+|. |..+..+++.+ +...|++++.++++.+.++    .+|...+........+       +
T Consensus       242 ~~~~l~~~~g~~VLDlgaG~-G~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~~v~~~~~Da~~-------~  313 (445)
T PRK14904        242 ACLLLNPQPGSTVLDLCAAP-GGKSTFMAELMQNRGQITAVDRYPQKLEKIRSHASALGITIIETIEGDARS-------F  313 (445)
T ss_pred             HHHhcCCCCCCEEEEECCCC-CHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHhCCCeEEEEeCcccc-------c
Confidence            33556778999999887644 33444555544 2237999999998876554    4676542221111111       1


Q ss_pred             HHHcCCCccEEE-E--CCCCH-------------------------HHHHHHHHhcccCCEEEEEcC
Q 017916          248 QKAMGTGIDVSF-D--CAGFN-------------------------KTMSTALSATRAGGKVCLVGM  286 (364)
Q Consensus       248 ~~~~~~~~d~vi-d--~~g~~-------------------------~~~~~~~~~l~~~G~~v~~g~  286 (364)
                      .  ....+|.|+ |  |+|++                         ..+..+++.|++||+++....
T Consensus       314 ~--~~~~fD~Vl~D~Pcsg~g~~~r~p~~~~~~~~~~~~~l~~~q~~iL~~a~~~lkpgG~lvystc  378 (445)
T PRK14904        314 S--PEEQPDAILLDAPCTGTGVLGRRAELRWKLTPEKLAELVGLQAELLDHAASLLKPGGVLVYATC  378 (445)
T ss_pred             c--cCCCCCEEEEcCCCCCcchhhcCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeC
Confidence            1  134699987 4  55532                         257778889999999997653

>PRK06114 short chain dehydrogenase; Provisional

Probab=94.95  E-value=0.36  Score=42.39  Aligned_cols=82  Identities=17%  Similarity=0.277  Sum_probs=48.7

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChh-H-HHHH---HHcCCC-eEEecCC-CcccHHHHHHHHHHHcC
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDY-R-LSVA---KELGAD-NIVKVST-NLQDIAEEVEKIQKAMG  252 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~-~-~~~~---~~lg~~-~~~~~~~-~~~~~~~~i~~~~~~~~  252 (364)
                      .+.++||+|+ +++|.+.++.+...|++ ++.++++.+ . .+..   +..+.. ..+..+- ..++..+.+...... -
T Consensus         7 ~~k~~lVtG~s~gIG~~ia~~l~~~G~~-v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~-~   84 (254)
T PRK06114          7 DGQVAFVTGAGSGIGQRIAIGLAQAGAD-VALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTSKADLRAAVARTEAE-L   84 (254)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCE-EEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHH-c
Confidence            4678999998 99999999999999994 556655432 2 2222   233422 1222222 223333334443332 3


Q ss_pred             CCccEEEECCCC
Q 017916          253 TGIDVSFDCAGF  264 (364)
Q Consensus       253 ~~~d~vid~~g~  264 (364)
                      +++|++|.+.|.
T Consensus        85 g~id~li~~ag~   96 (254)
T PRK06114         85 GALTLAVNAAGI   96 (254)
T ss_pred             CCCCEEEECCCC
Confidence            579999999873

>COG2227 UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase [Coenzyme metabolism]

Probab=94.94  E-value=0.3  Score=41.98  Aligned_cols=96  Identities=22%  Similarity=0.260  Sum_probs=62.6

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeE--EecCCCcccHHHHHHHHHHHcCCCccE
Q 017916          180 GPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNI--VKVSTNLQDIAEEVEKIQKAMGTGIDV  257 (364)
Q Consensus       180 ~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~--~~~~~~~~~~~~~i~~~~~~~~~~~d~  257 (364)
                      -+|-+||=.|+|+ |+.+..+| ++|+ .|.++|.+++..+.++.-.....  ++|...      .+.++.. .++.||+
T Consensus        58 l~g~~vLDvGCGg-G~Lse~mA-r~Ga-~VtgiD~se~~I~~Ak~ha~e~gv~i~y~~~------~~edl~~-~~~~FDv  127 (243)
T COG2227          58 LPGLRVLDVGCGG-GILSEPLA-RLGA-SVTGIDASEKPIEVAKLHALESGVNIDYRQA------TVEDLAS-AGGQFDV  127 (243)
T ss_pred             CCCCeEEEecCCc-cHhhHHHH-HCCC-eeEEecCChHHHHHHHHhhhhccccccchhh------hHHHHHh-cCCCccE
Confidence            4788999988754 45555554 4577 79999999999888874322221  233321      2333332 2478999


Q ss_pred             EEE-----CCCCH-HHHHHHHHhcccCCEEEEEc
Q 017916          258 SFD-----CAGFN-KTMSTALSATRAGGKVCLVG  285 (364)
Q Consensus       258 vid-----~~g~~-~~~~~~~~~l~~~G~~v~~g  285 (364)
                      |++     .+..+ ..+..+.+.++|+|.+...-
T Consensus       128 V~cmEVlEHv~dp~~~~~~c~~lvkP~G~lf~ST  161 (243)
T COG2227         128 VTCMEVLEHVPDPESFLRACAKLVKPGGILFLST  161 (243)
T ss_pred             EEEhhHHHccCCHHHHHHHHHHHcCCCcEEEEec
Confidence            986     34444 35667999999999887664

>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional

Probab=94.93  E-value=0.29  Score=42.88  Aligned_cols=81  Identities=27%  Similarity=0.378  Sum_probs=49.1

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHH-HHc---CCC-eEEecCC-CcccHHHHHHHHHHHcCC
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KEL---GAD-NIVKVST-NLQDIAEEVEKIQKAMGT  253 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~-~~l---g~~-~~~~~~~-~~~~~~~~i~~~~~~~~~  253 (364)
                      .+.+|||+|+ |.+|...++.+...|+ .|++++++.++.+.. .++   +.. ..+..+- ..+++.+.++.+... .+
T Consensus         3 ~~~~vlItG~sg~iG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-~~   80 (258)
T PRK12429          3 KGKVALVTGAASGIGLEIALALAKEGA-KVVIADLNDEAAAAAAEALQKAGGKAIGVAMDVTDEEAINAGIDYAVET-FG   80 (258)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH-cC
Confidence            3578999998 9999999998888899 566676666554322 222   322 1222222 223333333333322 24


Q ss_pred             CccEEEECCC
Q 017916          254 GIDVSFDCAG  263 (364)
Q Consensus       254 ~~d~vid~~g  263 (364)
                      ++|++|.++|
T Consensus        81 ~~d~vi~~a~   90 (258)
T PRK12429         81 GVDILVNNAG   90 (258)
T ss_pred             CCCEEEECCC
Confidence            7999999886

>PRK06194 hypothetical protein; Provisional

Probab=94.93  E-value=0.23  Score=44.42  Aligned_cols=82  Identities=23%  Similarity=0.326  Sum_probs=49.1

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHH-HHHHc---CCCe-EEecCCC-cccHHHHHHHHHHHcCC
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLS-VAKEL---GADN-IVKVSTN-LQDIAEEVEKIQKAMGT  253 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~-~~~~l---g~~~-~~~~~~~-~~~~~~~i~~~~~~~~~  253 (364)
                      .+.++||+|+ |.+|...++.+...|+ .|+.++++.++.+ ...++   +... .+..+-. .+++.+.+..+.+. .+
T Consensus         5 ~~k~vlVtGasggIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~-~g   82 (287)
T PRK06194          5 AGKVAVITGAASGFGLAFARIGAALGM-KLVLADVQQDALDRAVAELRAQGAEVLGVRTDVSDAAQVEALADAALER-FG   82 (287)
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHH-cC
Confidence            3578999998 9999999998888999 5666766654433 22332   3221 1222221 22333333333222 34


Q ss_pred             CccEEEECCCC
Q 017916          254 GIDVSFDCAGF  264 (364)
Q Consensus       254 ~~d~vid~~g~  264 (364)
                      ++|++|.++|.
T Consensus        83 ~id~vi~~Ag~   93 (287)
T PRK06194         83 AVHLLFNNAGV   93 (287)
T ss_pred             CCCEEEECCCC
Confidence            68999999874

>PF01596 Methyltransf_3: O-methyltransferase; InterPro: IPR002935 Members of this family are O-methyltransferases

Probab=94.92  E-value=0.25  Score=41.94  Aligned_cols=103  Identities=23%  Similarity=0.296  Sum_probs=67.6

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHCCC-CEEEEEecChhHHHHHHH----cCCCeEEecCCCcccHHHHHHHHHHHc-CC
Q 017916          180 GPETNVLIMGAGPIGLVTMLGARAFGA-PRIVIVDVDDYRLSVAKE----LGADNIVKVSTNLQDIAEEVEKIQKAM-GT  253 (364)
Q Consensus       180 ~~g~~VLI~Gag~~G~~ai~la~~~g~-~~vv~~~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~i~~~~~~~-~~  253 (364)
                      ....+||-.|.+. |..++.+|+.+.- ..+++++.++++.+.+++    .|...-+.+.  ..+..+.+..+.... .+
T Consensus        44 ~~~k~vLEIGt~~-GySal~la~~l~~~g~i~tiE~~~~~~~~A~~~~~~ag~~~~I~~~--~gda~~~l~~l~~~~~~~  120 (205)
T PF01596_consen   44 TRPKRVLEIGTFT-GYSALWLAEALPEDGKITTIEIDPERAEIARENFRKAGLDDRIEVI--EGDALEVLPELANDGEEG  120 (205)
T ss_dssp             HT-SEEEEESTTT-SHHHHHHHHTSTTTSEEEEEESSHHHHHHHHHHHHHTTGGGGEEEE--ES-HHHHHHHHHHTTTTT
T ss_pred             cCCceEEEecccc-ccHHHHHHHhhcccceEEEecCcHHHHHHHHHHHHhcCCCCcEEEE--EeccHhhHHHHHhccCCC
Confidence            3456999998643 8899999998742 389999999988777654    4543222211  145555566554322 24


Q ss_pred             CccEEE-ECCCC--HHHHHHHHHhcccCCEEEEEc
Q 017916          254 GIDVSF-DCAGF--NKTMSTALSATRAGGKVCLVG  285 (364)
Q Consensus       254 ~~d~vi-d~~g~--~~~~~~~~~~l~~~G~~v~~g  285 (364)
                      .||+|| |+.=.  ...+..++++|+++|.++.=+
T Consensus       121 ~fD~VFiDa~K~~y~~y~~~~~~ll~~ggvii~DN  155 (205)
T PF01596_consen  121 QFDFVFIDADKRNYLEYFEKALPLLRPGGVIIADN  155 (205)
T ss_dssp             SEEEEEEESTGGGHHHHHHHHHHHEEEEEEEEEET
T ss_pred             ceeEEEEcccccchhhHHHHHhhhccCCeEEEEcc
Confidence            799987 55321  356778889999999988754

The family includes also bacterial O-methyltransferases that may be involved in antibiotic production [].; GO: 0008171 O-methyltransferase activity; PDB: 1SUI_C 1SUS_D 3CBG_A 2GPY_B 3TR6_A 2AVD_A 3DUL_B 3DUW_B 2ZTH_A 1VID_A ....

>PRK12747 short chain dehydrogenase; Provisional

Probab=94.92  E-value=0.58  Score=40.93  Aligned_cols=31  Identities=26%  Similarity=0.205  Sum_probs=25.8

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEE
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIV  212 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~  212 (364)
                      .+.++||+|+ +.+|.+.++.+...|++ |+.+
T Consensus         3 ~~k~~lItGas~gIG~~ia~~l~~~G~~-v~~~   34 (252)
T PRK12747          3 KGKVALVTGASRGIGRAIAKRLANDGAL-VAIH   34 (252)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCe-EEEE
Confidence            4679999998 99999999999999995 4443

>PRK06719 precorrin-2 dehydrogenase; Validated

Probab=94.91  E-value=0.65  Score=37.66  Aligned_cols=87  Identities=14%  Similarity=0.109  Sum_probs=51.8

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcCCCccEEEE
Q 017916          181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  260 (364)
Q Consensus       181 ~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid  260 (364)
                      .|.+|||.|+|.+|..-++.+...|++ |.+++  ++..+.+++++......     ..+       ....-.++|+||-
T Consensus        12 ~~~~vlVvGGG~va~rka~~Ll~~ga~-V~VIs--p~~~~~l~~l~~i~~~~-----~~~-------~~~dl~~a~lVia   76 (157)
T PRK06719         12 HNKVVVIIGGGKIAYRKASGLKDTGAF-VTVVS--PEICKEMKELPYITWKQ-----KTF-------SNDDIKDAHLIYA   76 (157)
T ss_pred             CCCEEEEECCCHHHHHHHHHHHhCCCE-EEEEc--CccCHHHHhccCcEEEe-----ccc-------ChhcCCCceEEEE
Confidence            578999999999999888888888995 55553  33333334454222211     111       1111257899999


Q ss_pred             CCCCHHHHHHHHHhcccCCEEEE
Q 017916          261 CAGFNKTMSTALSATRAGGKVCL  283 (364)
Q Consensus       261 ~~g~~~~~~~~~~~l~~~G~~v~  283 (364)
                      ++++.+ .+..+..++....++.
T Consensus        77 aT~d~e-~N~~i~~~a~~~~~vn   98 (157)
T PRK06719         77 ATNQHA-VNMMVKQAAHDFQWVN   98 (157)
T ss_pred             CCCCHH-HHHHHHHHHHHCCcEE
Confidence            998654 4555554444343443

>PRK05876 short chain dehydrogenase; Provisional

Probab=94.91  E-value=0.23  Score=44.29  Aligned_cols=81  Identities=27%  Similarity=0.318  Sum_probs=49.0

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHH-HHH---cCCCe-EEecCC-CcccHHHHHHHHHHHcCC
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSV-AKE---LGADN-IVKVST-NLQDIAEEVEKIQKAMGT  253 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~-~~~---lg~~~-~~~~~~-~~~~~~~~i~~~~~~~~~  253 (364)
                      .+.++||+|+ |.+|.+.+..+...|++ |+.++++.++.+. .++   .+... .+..|- ...++.+.+....+. -+
T Consensus         5 ~~k~vlVTGas~gIG~ala~~La~~G~~-Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~-~g   82 (275)
T PRK05876          5 PGRGAVITGGASGIGLATGTEFARRGAR-VVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVRHREEVTHLADEAFRL-LG   82 (275)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHH-cC
Confidence            4678999998 99999999999899994 6666666554432 222   23321 222221 122333333333222 34


Q ss_pred             CccEEEECCC
Q 017916          254 GIDVSFDCAG  263 (364)
Q Consensus       254 ~~d~vid~~g  263 (364)
                      ++|++|+++|
T Consensus        83 ~id~li~nAg   92 (275)
T PRK05876         83 HVDVVFSNAG   92 (275)
T ss_pred             CCCEEEECCC
Confidence            7999999887

>PRK06398 aldose dehydrogenase; Validated

Probab=94.90  E-value=0.19  Score=44.35  Aligned_cols=76  Identities=16%  Similarity=0.302  Sum_probs=46.8

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCC-CcccHHHHHHHHHHHcCCCccEE
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVST-NLQDIAEEVEKIQKAMGTGIDVS  258 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~-~~~~~~~~i~~~~~~~~~~~d~v  258 (364)
                      .|.++||+|+ +.+|.+.+..+...|+ .|+.++++..+..     .. ..+..|- ..++..+.+...... -+++|++
T Consensus         5 ~gk~vlItGas~gIG~~ia~~l~~~G~-~Vi~~~r~~~~~~-----~~-~~~~~D~~~~~~i~~~~~~~~~~-~~~id~l   76 (258)
T PRK06398          5 KDKVAIVTGGSQGIGKAVVNRLKEEGS-NVINFDIKEPSYN-----DV-DYFKVDVSNKEQVIKGIDYVISK-YGRIDIL   76 (258)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCccccC-----ce-EEEEccCCCHHHHHHHHHHHHHH-cCCCCEE
Confidence            4679999998 9999999999999999 4666665543321     11 1121221 223333344443332 3469999


Q ss_pred             EECCCC
Q 017916          259 FDCAGF  264 (364)
Q Consensus       259 id~~g~  264 (364)
                      |+++|.
T Consensus        77 i~~Ag~   82 (258)
T PRK06398         77 VNNAGI   82 (258)
T ss_pred             EECCCC
Confidence            998873

>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=94.90  E-value=0.94  Score=39.47  Aligned_cols=104  Identities=16%  Similarity=0.188  Sum_probs=59.5

Q ss_pred             CCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHH-H---HHHHcCCC-eEEecCC-CcccHHHHHHHHHHHcCCC
Q 017916          182 ETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRL-S---VAKELGAD-NIVKVST-NLQDIAEEVEKIQKAMGTG  254 (364)
Q Consensus       182 g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~-~---~~~~lg~~-~~~~~~~-~~~~~~~~i~~~~~~~~~~  254 (364)
                      +.++||+|+ |.+|...++.+...|+++++....+.++. +   .++..+.. ..+..+- ...++...++.+.... .+
T Consensus         6 ~~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~   84 (252)
T PRK06077          6 DKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKENGGEGIGVLADVSTREGCETLAKATIDRY-GV   84 (252)
T ss_pred             CcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHcCCeeEEEEeccCCHHHHHHHHHHHHHHc-CC
Confidence            578999998 99999999988889996444443332222 2   22333332 1222221 1223333344443322 47


Q ss_pred             ccEEEECCCC----------HH---------------HHHHHHHhcccCCEEEEEcC
Q 017916          255 IDVSFDCAGF----------NK---------------TMSTALSATRAGGKVCLVGM  286 (364)
Q Consensus       255 ~d~vid~~g~----------~~---------------~~~~~~~~l~~~G~~v~~g~  286 (364)
                      +|++|.++|.          .+               ..+.+.+.++..|+++.++.
T Consensus        85 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~sS  141 (252)
T PRK06077         85 ADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREGGAIVNIAS  141 (252)
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcCcEEEEEcc
Confidence            9999999873          11               12344556667788988874

>PRK06197 short chain dehydrogenase; Provisional

Probab=94.89  E-value=0.23  Score=45.01  Aligned_cols=81  Identities=22%  Similarity=0.310  Sum_probs=47.8

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHH-HHHc-----CCC-eEEecCC-CcccHHHHHHHHHHHc
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSV-AKEL-----GAD-NIVKVST-NLQDIAEEVEKIQKAM  251 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~-~~~l-----g~~-~~~~~~~-~~~~~~~~i~~~~~~~  251 (364)
                      .+.+|||+|+ |.+|..+++.+...|+ .++.+.++.++.+. .+.+     +.. ..+..+- ..++..+.+.++... 
T Consensus        15 ~~k~vlItGas~gIG~~~a~~l~~~G~-~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~-   92 (306)
T PRK06197         15 SGRVAVVTGANTGLGYETAAALAAKGA-HVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSLASVRAAADALRAA-   92 (306)
T ss_pred             CCCEEEEcCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHhh-
Confidence            5689999998 9999999998888899 46666666554332 2222     111 1222221 112333333333222 


Q ss_pred             CCCccEEEECCC
Q 017916          252 GTGIDVSFDCAG  263 (364)
Q Consensus       252 ~~~~d~vid~~g  263 (364)
                      -+++|++|.++|
T Consensus        93 ~~~iD~li~nAg  104 (306)
T PRK06197         93 YPRIDLLINNAG  104 (306)
T ss_pred             CCCCCEEEECCc
Confidence            247999999887

>PRK08277 D-mannonate oxidoreductase; Provisional

Probab=94.88  E-value=0.35  Score=43.07  Aligned_cols=81  Identities=21%  Similarity=0.294  Sum_probs=48.9

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHH-HHHHc---CCC-eEEecCCC-cccHHHHHHHHHHHcCC
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLS-VAKEL---GAD-NIVKVSTN-LQDIAEEVEKIQKAMGT  253 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~-~~~~l---g~~-~~~~~~~~-~~~~~~~i~~~~~~~~~  253 (364)
                      .+.++||+|+ |.+|.+.+..+...|+ .|+.++++.++.+ +.+++   +.. ..+..+-. ..++.+.+..+... -+
T Consensus         9 ~~k~vlVtGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~-~g   86 (278)
T PRK08277          9 KGKVAVITGGGGVLGGAMAKELARAGA-KVAILDRNQEKAEAVVAEIKAAGGEALAVKADVLDKESLEQARQQILED-FG   86 (278)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHH-cC
Confidence            4678999998 9999999999989999 5666766655433 22222   322 12222221 12233333333222 24


Q ss_pred             CccEEEECCC
Q 017916          254 GIDVSFDCAG  263 (364)
Q Consensus       254 ~~d~vid~~g  263 (364)
                      ++|++|.++|
T Consensus        87 ~id~li~~ag   96 (278)
T PRK08277         87 PCDILINGAG   96 (278)
T ss_pred             CCCEEEECCC
Confidence            7999999887

>PRK12549 shikimate 5-dehydrogenase; Reviewed

Probab=94.86  E-value=0.19  Score=45.11  Aligned_cols=43  Identities=28%  Similarity=0.400  Sum_probs=36.8

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHH
Q 017916          180 GPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA  222 (364)
Q Consensus       180 ~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~  222 (364)
                      ..+.+|+|.|+|++|.+++..+...|++.+.+++++.+|.+.+
T Consensus       125 ~~~k~vlIlGaGGaaraia~aL~~~G~~~I~I~nR~~~ka~~l  167 (284)
T PRK12549        125 ASLERVVQLGAGGAGAAVAHALLTLGVERLTIFDVDPARAAAL  167 (284)
T ss_pred             ccCCEEEEECCcHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH
Confidence            3567999999999999999999999998899998888776544

>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=94.86  E-value=0.33  Score=42.84  Aligned_cols=81  Identities=16%  Similarity=0.169  Sum_probs=47.4

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEE-ecChhHHH-HHHH----cCCC-eEEecCCC-cccHHHHHHHHHHHc
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIV-DVDDYRLS-VAKE----LGAD-NIVKVSTN-LQDIAEEVEKIQKAM  251 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~-~~~~~~~~-~~~~----lg~~-~~~~~~~~-~~~~~~~i~~~~~~~  251 (364)
                      ++.++||+|+ +++|.+.+..+...|++ |+.+ .++.++.+ ..++    .+.. ..+..|-. .+++.+.+..+.+. 
T Consensus         7 ~~k~vlItGas~gIG~~ia~~l~~~G~~-v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-   84 (260)
T PRK08416          7 KGKTLVISGGTRGIGKAIVYEFAQSGVN-IAFTYNSNVEEANKIAEDLEQKYGIKAKAYPLNILEPETYKELFKKIDED-   84 (260)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCE-EEEEcCCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHh-
Confidence            4789999998 99999999999999995 4444 33444332 2222    2322 22222222 23333333333322 


Q ss_pred             CCCccEEEECCC
Q 017916          252 GTGIDVSFDCAG  263 (364)
Q Consensus       252 ~~~~d~vid~~g  263 (364)
                      -+++|++|+++|
T Consensus        85 ~g~id~lv~nAg   96 (260)
T PRK08416         85 FDRVDFFISNAI   96 (260)
T ss_pred             cCCccEEEECcc
Confidence            247999999875

>PRK06701 short chain dehydrogenase; Provisional

Probab=94.84  E-value=0.73  Score=41.47  Aligned_cols=83  Identities=20%  Similarity=0.191  Sum_probs=47.5

Q ss_pred             CCCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecCh-hHH----HHHHHcCCCe-EEecCCC-cccHHHHHHHHHHHc
Q 017916          180 GPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDD-YRL----SVAKELGADN-IVKVSTN-LQDIAEEVEKIQKAM  251 (364)
Q Consensus       180 ~~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~-~~~----~~~~~lg~~~-~~~~~~~-~~~~~~~i~~~~~~~  251 (364)
                      -++.++||+|+ |.+|...+..+...|++ |+.+.++. ...    +.++..+... .+..|-. ..++.+.++.+... 
T Consensus        44 ~~~k~iLItGasggIG~~la~~l~~~G~~-V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~-  121 (290)
T PRK06701         44 LKGKVALITGGDSGIGRAVAVLFAKEGAD-IAIVYLDEHEDANETKQRVEKEGVKCLLIPGDVSDEAFCKDAVEETVRE-  121 (290)
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCE-EEEEeCCcchHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH-
Confidence            35679999998 99999999888888995 55554443 211    1222223222 2222222 22333333333332 


Q ss_pred             CCCccEEEECCCC
Q 017916          252 GTGIDVSFDCAGF  264 (364)
Q Consensus       252 ~~~~d~vid~~g~  264 (364)
                      .+++|++|.++|.
T Consensus       122 ~~~iD~lI~~Ag~  134 (290)
T PRK06701        122 LGRLDILVNNAAF  134 (290)
T ss_pred             cCCCCEEEECCcc
Confidence            2479999988773

>PRK11207 tellurite resistance protein TehB; Provisional

Probab=94.84  E-value=0.18  Score=42.59  Aligned_cols=98  Identities=15%  Similarity=0.207  Sum_probs=61.2

Q ss_pred             HHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHH----cCCCeEEecCCCcccHHHHHHHHHHH
Q 017916          175 RRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKE----LGADNIVKVSTNLQDIAEEVEKIQKA  250 (364)
Q Consensus       175 ~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~i~~~~~~  250 (364)
                      +.....++.+||-.|+|. |..+..+|+. |. .|++++.+++-.+.+++    .+...+...   ..++.    .+.  
T Consensus        24 ~~l~~~~~~~vLDiGcG~-G~~a~~La~~-g~-~V~gvD~S~~~i~~a~~~~~~~~~~~v~~~---~~d~~----~~~--   91 (197)
T PRK11207         24 EAVKVVKPGKTLDLGCGN-GRNSLYLAAN-GF-DVTAWDKNPMSIANLERIKAAENLDNLHTA---VVDLN----NLT--   91 (197)
T ss_pred             HhcccCCCCcEEEECCCC-CHHHHHHHHC-CC-EEEEEeCCHHHHHHHHHHHHHcCCCcceEE---ecChh----hCC--
Confidence            444556778999998765 6677788875 76 78999999876665543    233211100   01111    111  


Q ss_pred             cCCCccEEEECCC----C----HHHHHHHHHhcccCCEEEEE
Q 017916          251 MGTGIDVSFDCAG----F----NKTMSTALSATRAGGKVCLV  284 (364)
Q Consensus       251 ~~~~~d~vid~~g----~----~~~~~~~~~~l~~~G~~v~~  284 (364)
                      ....+|+|+....    .    ...+..+.+.|+|+|.++.+
T Consensus        92 ~~~~fD~I~~~~~~~~~~~~~~~~~l~~i~~~LkpgG~~~~~  133 (197)
T PRK11207         92 FDGEYDFILSTVVLMFLEAKTIPGLIANMQRCTKPGGYNLIV  133 (197)
T ss_pred             cCCCcCEEEEecchhhCCHHHHHHHHHHHHHHcCCCcEEEEE
Confidence            1346999987532    1    25667888899999996554

>PRK14902 16S rRNA methyltransferase B; Provisional

Probab=94.83  E-value=0.55  Score=45.15  Aligned_cols=103  Identities=22%  Similarity=0.319  Sum_probs=63.4

Q ss_pred             HHcCCCCCCEEEEEcCCHHHHHHHHHHHHC-CCCEEEEEecChhHHHHHH----HcCCCeEEecCCCcccHHHHHHHHHH
Q 017916          175 RRANIGPETNVLIMGAGPIGLVTMLGARAF-GAPRIVIVDVDDYRLSVAK----ELGADNIVKVSTNLQDIAEEVEKIQK  249 (364)
Q Consensus       175 ~~~~~~~g~~VLI~Gag~~G~~ai~la~~~-g~~~vv~~~~~~~~~~~~~----~lg~~~~~~~~~~~~~~~~~i~~~~~  249 (364)
                      ....++++++||=.|+|. |..++.+++.. +...+++++.++++.+.++    .+|...+.....   |..+....+  
T Consensus       244 ~~l~~~~g~~VLDlgaG~-G~~t~~la~~~~~~~~v~avDi~~~~l~~~~~n~~~~g~~~v~~~~~---D~~~~~~~~--  317 (444)
T PRK14902        244 PALDPKGGDTVLDACAAP-GGKTTHIAELLKNTGKVVALDIHEHKLKLIEENAKRLGLTNIETKAL---DARKVHEKF--  317 (444)
T ss_pred             HHhCCCCCCEEEEeCCCC-CHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEeC---Ccccccchh--
Confidence            446778899988887644 44555666665 3347999999998876654    456654222211   111111111  


Q ss_pred             HcCCCccEEE-E--CCCCH-------------------------HHHHHHHHhcccCCEEEEEc
Q 017916          250 AMGTGIDVSF-D--CAGFN-------------------------KTMSTALSATRAGGKVCLVG  285 (364)
Q Consensus       250 ~~~~~~d~vi-d--~~g~~-------------------------~~~~~~~~~l~~~G~~v~~g  285 (364)
                        ...+|.|+ |  |+|.+                         +.+..+++.|++||+++...
T Consensus       318 --~~~fD~Vl~D~Pcsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~lvyst  379 (444)
T PRK14902        318 --AEKFDKILVDAPCSGLGVIRRKPDIKYNKTKEDIESLQEIQLEILESVAQYLKKGGILVYST  379 (444)
T ss_pred             --cccCCEEEEcCCCCCCeeeccCcchhhcCCHHHHHHHHHHHHHHHHHHHHHcCCCCEEEEEc
Confidence              24699986 4  44421                         35777889999999998654

>PRK08264 short chain dehydrogenase; Validated

Probab=94.82  E-value=0.17  Score=43.93  Aligned_cols=77  Identities=21%  Similarity=0.244  Sum_probs=47.2

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCC-eEEecCCCcccHHHHHHHHHHHcCCCccEE
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGAD-NIVKVSTNLQDIAEEVEKIQKAMGTGIDVS  258 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~d~v  258 (364)
                      .+.++||+|+ |.+|...++.+...|++.|+.+.++.++.+.   .+.. ..+..+-.+   .+.++++.+. -..+|++
T Consensus         5 ~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~---~~~~~~~~~~D~~~---~~~~~~~~~~-~~~id~v   77 (238)
T PRK08264          5 KGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD---LGPRVVPLQLDVTD---PASVAAAAEA-ASDVTIL   77 (238)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh---cCCceEEEEecCCC---HHHHHHHHHh-cCCCCEE
Confidence            4578999998 9999999999999998456766666554432   2221 122212111   1223333322 2468999


Q ss_pred             EECCCC
Q 017916          259 FDCAGF  264 (364)
Q Consensus       259 id~~g~  264 (364)
                      |.++|.
T Consensus        78 i~~ag~   83 (238)
T PRK08264         78 VNNAGI   83 (238)
T ss_pred             EECCCc
Confidence            998875

>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

Probab=94.82  E-value=0.64  Score=40.58  Aligned_cols=77  Identities=18%  Similarity=0.241  Sum_probs=46.4

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCC-eEEecCC-CcccHHHHHHHHHHHcCCCccE
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGAD-NIVKVST-NLQDIAEEVEKIQKAMGTGIDV  257 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~-~~~~~~~-~~~~~~~~i~~~~~~~~~~~d~  257 (364)
                      .+.++||+|+ |.+|...+..+...|+ .++.++++.     ....+.. ..+..+- ..+++.+.+..+... .+++|+
T Consensus         7 ~~k~vlItGas~~iG~~la~~l~~~G~-~v~~~~~~~-----~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~~id~   79 (252)
T PRK08220          7 SGKTVWVTGAAQGIGYAVALAFVEAGA-KVIGFDQAF-----LTQEDYPFATFVLDVSDAAAVAQVCQRLLAE-TGPLDV   79 (252)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEecch-----hhhcCCceEEEEecCCCHHHHHHHHHHHHHH-cCCCCE
Confidence            4678999998 9999999998888999 566665544     1222221 1222221 123333334333322 246999


Q ss_pred             EEECCCC
Q 017916          258 SFDCAGF  264 (364)
Q Consensus       258 vid~~g~  264 (364)
                      +|.+.|.
T Consensus        80 vi~~ag~   86 (252)
T PRK08220         80 LVNAAGI   86 (252)
T ss_pred             EEECCCc
Confidence            9998874

>PRK07856 short chain dehydrogenase; Provisional

Probab=94.80  E-value=0.3  Score=42.82  Aligned_cols=77  Identities=22%  Similarity=0.222  Sum_probs=47.2

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCC-eEEecCC-CcccHHHHHHHHHHHcCCCccE
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGAD-NIVKVST-NLQDIAEEVEKIQKAMGTGIDV  257 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~-~~~~~~~-~~~~~~~~i~~~~~~~~~~~d~  257 (364)
                      .+.++||+|+ |.+|...++.+...|+ .|+.++++.++    +..+.. ..+..+- ..+++.+.+..+.+. .+++|+
T Consensus         5 ~~k~~lItGas~gIG~~la~~l~~~g~-~v~~~~r~~~~----~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~~id~   78 (252)
T PRK07856          5 TGRVVLVTGGTRGIGAGIARAFLAAGA-TVVVCGRRAPE----TVDGRPAEFHAADVRDPDQVAALVDAIVER-HGRLDV   78 (252)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCChhh----hhcCCceEEEEccCCCHHHHHHHHHHHHHH-cCCCCE
Confidence            4789999998 9999999999988999 56666665544    112211 1222221 122333333333332 247899


Q ss_pred             EEECCC
Q 017916          258 SFDCAG  263 (364)
Q Consensus       258 vid~~g  263 (364)
                      +|.++|
T Consensus        79 vi~~ag   84 (252)
T PRK07856         79 LVNNAG   84 (252)
T ss_pred             EEECCC
Confidence            999887

>PRK06181 short chain dehydrogenase; Provisional

Probab=94.79  E-value=0.42  Score=42.09  Aligned_cols=81  Identities=25%  Similarity=0.363  Sum_probs=48.3

Q ss_pred             CCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHH-HH---HcCCCe-EEecCC-CcccHHHHHHHHHHHcCCC
Q 017916          182 ETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSV-AK---ELGADN-IVKVST-NLQDIAEEVEKIQKAMGTG  254 (364)
Q Consensus       182 g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~-~~---~lg~~~-~~~~~~-~~~~~~~~i~~~~~~~~~~  254 (364)
                      +.+|||+|+ |.+|..+++.+...|+ .|+.+++++++.+. .+   ..+... ++..+- ..+++.+.++...+. -++
T Consensus         1 ~~~vlVtGasg~iG~~la~~l~~~g~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-~~~   78 (263)
T PRK06181          1 GKVVIITGASEGIGRALAVRLARAGA-QLVLAARNETRLASLAQELADHGGEALVVPTDVSDAEACERLIEAAVAR-FGG   78 (263)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH-cCC
Confidence            357999998 9999999999989998 57777776654332 22   223321 122221 122333333333322 246


Q ss_pred             ccEEEECCCC
Q 017916          255 IDVSFDCAGF  264 (364)
Q Consensus       255 ~d~vid~~g~  264 (364)
                      +|++|.++|.
T Consensus        79 id~vi~~ag~   88 (263)
T PRK06181         79 IDILVNNAGI   88 (263)
T ss_pred             CCEEEECCCc
Confidence            9999999873

>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated

Probab=94.79  E-value=0.38  Score=42.20  Aligned_cols=82  Identities=18%  Similarity=0.254  Sum_probs=49.3

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChh--HHHHHHHcCCC-eEEecCC-CcccHHHHHHHHHHHcCCCc
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDY--RLSVAKELGAD-NIVKVST-NLQDIAEEVEKIQKAMGTGI  255 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~--~~~~~~~lg~~-~~~~~~~-~~~~~~~~i~~~~~~~~~~~  255 (364)
                      .|.++||+|+ +.+|.+.++.+...|++ |+.++....  ..+.+++++.. ..+..+- ..++..+.+.++.+. .+++
T Consensus         9 ~~k~~lItG~~~gIG~a~a~~l~~~G~~-vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-~~~~   86 (253)
T PRK08993          9 EGKVAVVTGCDTGLGQGMALGLAEAGCD-IVGINIVEPTETIEQVTALGRRFLSLTADLRKIDGIPALLERAVAE-FGHI   86 (253)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCE-EEEecCcchHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHH-hCCC
Confidence            4679999998 99999999999999995 555544322  22333344432 1222222 223344444444332 2479


Q ss_pred             cEEEECCCC
Q 017916          256 DVSFDCAGF  264 (364)
Q Consensus       256 d~vid~~g~  264 (364)
                      |++|+++|.
T Consensus        87 D~li~~Ag~   95 (253)
T PRK08993         87 DILVNNAGL   95 (253)
T ss_pred             CEEEECCCC
Confidence            999999874

>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]

Probab=94.77  E-value=0.22  Score=44.33  Aligned_cols=84  Identities=25%  Similarity=0.255  Sum_probs=52.1

Q ss_pred             CCCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHH-HH---cCCC----eEEecCC-CcccHHHHHHHHHH
Q 017916          180 GPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KE---LGAD----NIVKVST-NLQDIAEEVEKIQK  249 (364)
Q Consensus       180 ~~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~-~~---lg~~----~~~~~~~-~~~~~~~~i~~~~~  249 (364)
                      -.|..+||+|+ .++|.+.+..+...|+ .|+.+.++.++.+.. +.   .+..    ..+..+- ..++..+.+.....
T Consensus         6 l~gkvalVTG~s~GIG~aia~~la~~Ga-~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~~~~   84 (270)
T KOG0725|consen    6 LAGKVALVTGGSSGIGKAIALLLAKAGA-KVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEFAVE   84 (270)
T ss_pred             CCCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHHHHH
Confidence            35778899987 9999999999999999 566666776664332 22   2221    1122222 22333333433333


Q ss_pred             HcCCCccEEEECCCC
Q 017916          250 AMGTGIDVSFDCAGF  264 (364)
Q Consensus       250 ~~~~~~d~vid~~g~  264 (364)
                      ...+++|+.++.+|.
T Consensus        85 ~~~GkidiLvnnag~   99 (270)
T KOG0725|consen   85 KFFGKIDILVNNAGA   99 (270)
T ss_pred             HhCCCCCEEEEcCCc
Confidence            335689999998774

>PRK08251 short chain dehydrogenase; Provisional

Probab=94.77  E-value=0.43  Score=41.58  Aligned_cols=80  Identities=24%  Similarity=0.299  Sum_probs=48.3

Q ss_pred             CCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHH-Hc-----CCC-eEEecCCC-cccHHHHHHHHHHHcC
Q 017916          182 ETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAK-EL-----GAD-NIVKVSTN-LQDIAEEVEKIQKAMG  252 (364)
Q Consensus       182 g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~-~l-----g~~-~~~~~~~~-~~~~~~~i~~~~~~~~  252 (364)
                      +.++||+|+ |.+|...++.+...|+ .|+.+++++++.+.+. .+     +.. ..+..|-. .+++.+.++.+... -
T Consensus         2 ~k~vlItGas~giG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~   79 (248)
T PRK08251          2 RQKILITGASSGLGAGMAREFAAKGR-DLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDHDQVFEVFAEFRDE-L   79 (248)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHHHHHHHH-c
Confidence            468999998 9999988888888898 5666667766544332 11     211 12222222 23334444443332 3


Q ss_pred             CCccEEEECCC
Q 017916          253 TGIDVSFDCAG  263 (364)
Q Consensus       253 ~~~d~vid~~g  263 (364)
                      +++|++|.++|
T Consensus        80 ~~id~vi~~ag   90 (248)
T PRK08251         80 GGLDRVIVNAG   90 (248)
T ss_pred             CCCCEEEECCC
Confidence            47999999886

>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase

Probab=94.74  E-value=0.55  Score=39.50  Aligned_cols=77  Identities=29%  Similarity=0.370  Sum_probs=47.2

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHH-HHc----CCCeEEecCCCcccHHHHHHHHHHHcCCC
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KEL----GADNIVKVSTNLQDIAEEVEKIQKAMGTG  254 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~-~~l----g~~~~~~~~~~~~~~~~~i~~~~~~~~~~  254 (364)
                      ++.+++|.|+ |.+|..++..+...|+ .++.+.++.++.+.+ +.+    +.. +...+.  .+.. .+.+..    .+
T Consensus        27 ~~~~vlVlGgtG~iG~~~a~~l~~~g~-~V~l~~R~~~~~~~l~~~l~~~~~~~-~~~~~~--~~~~-~~~~~~----~~   97 (194)
T cd01078          27 KGKTAVVLGGTGPVGQRAAVLLAREGA-RVVLVGRDLERAQKAADSLRARFGEG-VGAVET--SDDA-ARAAAI----KG   97 (194)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhhcCCc-EEEeeC--CCHH-HHHHHH----hc
Confidence            5689999997 9999988888888887 667777776665433 223    222 111111  1111 122222    36


Q ss_pred             ccEEEECCCCHH
Q 017916          255 IDVSFDCAGFNK  266 (364)
Q Consensus       255 ~d~vid~~g~~~  266 (364)
                      .|++|.+...+.
T Consensus        98 ~diVi~at~~g~  109 (194)
T cd01078          98 ADVVFAAGAAGV  109 (194)
T ss_pred             CCEEEECCCCCc
Confidence            899999877544

Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo

>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

Probab=94.74  E-value=0.43  Score=41.59  Aligned_cols=81  Identities=19%  Similarity=0.296  Sum_probs=49.0

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHH----HHcCCC-eEEecCC-CcccHHHHHHHHHHHcCC
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA----KELGAD-NIVKVST-NLQDIAEEVEKIQKAMGT  253 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~----~~lg~~-~~~~~~~-~~~~~~~~i~~~~~~~~~  253 (364)
                      ++.++||+|+ |.+|...++.+...|+ .|+.++++.++...+    +..+.. ..+..+- ..+++.+.++.+.+. -.
T Consensus         2 ~~~~ilItGas~~iG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~-~~   79 (250)
T TIGR03206         2 KDKTAIVTGGGGGIGGATCRRFAEEGA-KVAVFDLNREAAEKVAADIRAKGGNAQAFACDITDRDSVDTAVAAAEQA-LG   79 (250)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEecCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH-cC
Confidence            4678999998 9999999999988999 566666665443322    222322 1222222 122333334433322 24


Q ss_pred             CccEEEECCC
Q 017916          254 GIDVSFDCAG  263 (364)
Q Consensus       254 ~~d~vid~~g  263 (364)
                      ++|++|.+.|
T Consensus        80 ~~d~vi~~ag   89 (250)
T TIGR03206        80 PVDVLVNNAG   89 (250)
T ss_pred             CCCEEEECCC
Confidence            7899999887

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.

>PRK10538 malonic semialdehyde reductase; Provisional

Probab=94.73  E-value=0.34  Score=42.32  Aligned_cols=79  Identities=27%  Similarity=0.323  Sum_probs=48.9

Q ss_pred             EEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHH-HcCCCe-EEecCC-CcccHHHHHHHHHHHcCCCccEEE
Q 017916          184 NVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAK-ELGADN-IVKVST-NLQDIAEEVEKIQKAMGTGIDVSF  259 (364)
Q Consensus       184 ~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~-~lg~~~-~~~~~~-~~~~~~~~i~~~~~~~~~~~d~vi  259 (364)
                      +|+|+|+ |.+|.+.+..+...|+ .|++++++.++.+.+. .++... .+..+- ..+++.+.+..+.+. .+++|.+|
T Consensus         2 ~vlItGasg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~-~~~id~vi   79 (248)
T PRK10538          2 IVLVTGATAGFGECITRRFIQQGH-KVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAE-WRNIDVLV   79 (248)
T ss_pred             EEEEECCCchHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhccceEEEEecCCCHHHHHHHHHHHHHH-cCCCCEEE
Confidence            6899998 9999999999988999 5777777776655443 344321 111111 122333333333222 24799999


Q ss_pred             ECCCC
Q 017916          260 DCAGF  264 (364)
Q Consensus       260 d~~g~  264 (364)
                      .++|.
T Consensus        80 ~~ag~   84 (248)
T PRK10538         80 NNAGL   84 (248)
T ss_pred             ECCCc
Confidence            98763

>PRK06720 hypothetical protein; Provisional

Probab=94.72  E-value=0.7  Score=37.98  Aligned_cols=81  Identities=25%  Similarity=0.314  Sum_probs=48.9

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHH-HHH---cCCCe-EEecCCC-cccHHHHHHHHHHHcCC
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSV-AKE---LGADN-IVKVSTN-LQDIAEEVEKIQKAMGT  253 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~-~~~---lg~~~-~~~~~~~-~~~~~~~i~~~~~~~~~  253 (364)
                      ++.+++|+|+ +++|...+..+...|+ .|+.++.+.++.+. .++   .+... .+..+-. .+++.+.+...... -+
T Consensus        15 ~gk~~lVTGa~~GIG~aia~~l~~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~v~~~~~~-~G   92 (169)
T PRK06720         15 AGKVAIVTGGGIGIGRNTALLLAKQGA-KVIVTDIDQESGQATVEEITNLGGEALFVSYDMEKQGDWQRVISITLNA-FS   92 (169)
T ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH-cC
Confidence            5778999998 8899999988888898 57777766554322 222   24321 2222221 23333333333322 24


Q ss_pred             CccEEEECCC
Q 017916          254 GIDVSFDCAG  263 (364)
Q Consensus       254 ~~d~vid~~g  263 (364)
                      ++|++++++|
T Consensus        93 ~iDilVnnAG  102 (169)
T PRK06720         93 RIDMLFQNAG  102 (169)
T ss_pred             CCCEEEECCC
Confidence            7899999888

>PRK09291 short chain dehydrogenase; Provisional

Probab=94.71  E-value=0.093  Score=46.08  Aligned_cols=75  Identities=19%  Similarity=0.221  Sum_probs=45.6

Q ss_pred             CCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHH----HcCCC-eEEecCCCcccHHHHHHHHHHHcCCCc
Q 017916          182 ETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAK----ELGAD-NIVKVSTNLQDIAEEVEKIQKAMGTGI  255 (364)
Q Consensus       182 g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~----~lg~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~  255 (364)
                      +.++||+|+ |.+|..+++.+...|+ .++++.+++++.+.+.    ..+.. .++..+-  .+. +.++..   ...++
T Consensus         2 ~~~vlVtGasg~iG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~--~~~-~~~~~~---~~~~i   74 (257)
T PRK09291          2 SKTILITGAGSGFGREVALRLARKGH-NVIAGVQIAPQVTALRAEAARRGLALRVEKLDL--TDA-IDRAQA---AEWDV   74 (257)
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcceEEEeeC--CCH-HHHHHH---hcCCC
Confidence            357999998 9999999999999999 4566666655443332    22322 1111111  111 123222   13479


Q ss_pred             cEEEECCC
Q 017916          256 DVSFDCAG  263 (364)
Q Consensus       256 d~vid~~g  263 (364)
                      |++|.++|
T Consensus        75 d~vi~~ag   82 (257)
T PRK09291         75 DVLLNNAG   82 (257)
T ss_pred             CEEEECCC
Confidence            99999887

>PRK08085 gluconate 5-dehydrogenase; Provisional

Probab=94.70  E-value=0.34  Score=42.51  Aligned_cols=82  Identities=29%  Similarity=0.473  Sum_probs=49.6

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHH-HHHHc---CCC-eEEecCCC-cccHHHHHHHHHHHcCC
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLS-VAKEL---GAD-NIVKVSTN-LQDIAEEVEKIQKAMGT  253 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~-~~~~l---g~~-~~~~~~~~-~~~~~~~i~~~~~~~~~  253 (364)
                      .+.++||+|+ +.+|.+.++.+...|+ .++.++++.++.+ ...++   +.. ..+..+-. ..++.+.+..+... -+
T Consensus         8 ~~k~~lItGas~giG~~ia~~L~~~G~-~vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-~~   85 (254)
T PRK08085          8 AGKNILITGSAQGIGFLLATGLAEYGA-EIIINDITAERAELAVAKLRQEGIKAHAAPFNVTHKQEVEAAIEHIEKD-IG   85 (254)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHHHHhcCCeEEEEecCCCCHHHHHHHHHHHHHh-cC
Confidence            4678999998 9999999999988999 5666766655433 22222   322 12222222 22333333333222 24


Q ss_pred             CccEEEECCCC
Q 017916          254 GIDVSFDCAGF  264 (364)
Q Consensus       254 ~~d~vid~~g~  264 (364)
                      ++|++|.+.|.
T Consensus        86 ~id~vi~~ag~   96 (254)
T PRK08085         86 PIDVLINNAGI   96 (254)
T ss_pred             CCCEEEECCCc
Confidence            79999998873

>cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E

Probab=94.68  E-value=0.2  Score=43.41  Aligned_cols=92  Identities=14%  Similarity=0.257  Sum_probs=55.4

Q ss_pred             CCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecCh-------------------hHH----HHHHHcCCCe-EEecCCCc
Q 017916          182 ETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDD-------------------YRL----SVAKELGADN-IVKVSTNL  237 (364)
Q Consensus       182 g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~-------------------~~~----~~~~~lg~~~-~~~~~~~~  237 (364)
                      +.+|+|.|.|++|..++..+.+.|...+..++.+.                   .|.    +.+++++..- +..++   
T Consensus        11 ~~~VlVvG~GGvGs~va~~Lar~GVg~i~LvD~D~V~~sNlnRq~~~~~~diG~~Kae~~~~~l~~inP~~~V~~~~---   87 (231)
T cd00755          11 NAHVAVVGLGGVGSWAAEALARSGVGKLTLIDFDVVCVSNLNRQIHALLSTVGKPKVEVMAERIRDINPECEVDAVE---   87 (231)
T ss_pred             CCCEEEECCCHHHHHHHHHHHHcCCCEEEEECCCEECchhhcchhCcChhhCCCcHHHHHHHHHHHHCCCcEEEEee---
Confidence            46899999999999999999999998888887432                   111    1122333221 11111   


Q ss_pred             ccHH-HHHHHHHHHcCCCccEEEECCCCHHHHHHHHHhcccCC
Q 017916          238 QDIA-EEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGG  279 (364)
Q Consensus       238 ~~~~-~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G  279 (364)
                      ..+. +....+.   ..++|+||||..+......+.+.....+
T Consensus        88 ~~i~~~~~~~l~---~~~~D~VvdaiD~~~~k~~L~~~c~~~~  127 (231)
T cd00755          88 EFLTPDNSEDLL---GGDPDFVVDAIDSIRAKVALIAYCRKRK  127 (231)
T ss_pred             eecCHhHHHHHh---cCCCCEEEEcCCCHHHHHHHHHHHHHhC
Confidence            1111 1122221   3469999999998766555666555554

coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>PRK11933 yebU rRNA (cytosine-C(5)-)-methyltransferase RsmF; Reviewed

Probab=94.67  E-value=0.98  Score=43.55  Aligned_cols=100  Identities=23%  Similarity=0.303  Sum_probs=64.1

Q ss_pred             CCCCCCEEEEEcCCHHHHHHHHHHHHCC-CCEEEEEecChhHHHHH----HHcCCCeEEecCCCcccHHHHHHHHHHHcC
Q 017916          178 NIGPETNVLIMGAGPIGLVTMLGARAFG-APRIVIVDVDDYRLSVA----KELGADNIVKVSTNLQDIAEEVEKIQKAMG  252 (364)
Q Consensus       178 ~~~~g~~VLI~Gag~~G~~ai~la~~~g-~~~vv~~~~~~~~~~~~----~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~  252 (364)
                      .+++|++||=..|++ |-=+.++|..++ -..+++.+.+..|...+    +++|+..+...+.....+.+       ...
T Consensus       110 ~~~pg~~VLD~CAAP-GgKTt~la~~l~~~g~lvA~D~~~~R~~~L~~nl~r~G~~nv~v~~~D~~~~~~-------~~~  181 (470)
T PRK11933        110 DDNAPQRVLDMAAAP-GSKTTQIAALMNNQGAIVANEYSASRVKVLHANISRCGVSNVALTHFDGRVFGA-------ALP  181 (470)
T ss_pred             CCCCCCEEEEeCCCc-cHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEeCchhhhhh-------hch
Confidence            678999998886543 333456666553 23789999999886554    56788765443332222211       113


Q ss_pred             CCccEEE-E--CCCC-------------------------HHHHHHHHHhcccCCEEEEEc
Q 017916          253 TGIDVSF-D--CAGF-------------------------NKTMSTALSATRAGGKVCLVG  285 (364)
Q Consensus       253 ~~~d~vi-d--~~g~-------------------------~~~~~~~~~~l~~~G~~v~~g  285 (364)
                      ..||.|+ |  |+|.                         .+.+..+++.|++||+++..-
T Consensus       182 ~~fD~ILvDaPCSG~G~~rk~p~~~~~~s~~~v~~l~~lQ~~iL~~A~~~LkpGG~LVYST  242 (470)
T PRK11933        182 ETFDAILLDAPCSGEGTVRKDPDALKNWSPESNLEIAATQRELIESAFHALKPGGTLVYST  242 (470)
T ss_pred             hhcCeEEEcCCCCCCcccccCHHHhhhCCHHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEC
Confidence            4688876 5  6654                         246677889999999998654

>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB

Probab=94.66  E-value=0.46  Score=41.53  Aligned_cols=33  Identities=27%  Similarity=0.432  Sum_probs=29.3

Q ss_pred             CCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEec
Q 017916          182 ETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDV  214 (364)
Q Consensus       182 g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~  214 (364)
                      +.+|+|.|+|++|..+++.+.+.|...+..+|.
T Consensus        24 ~~~VlvvG~GglGs~va~~La~~Gvg~i~lvD~   56 (240)
T TIGR02355        24 ASRVLIVGLGGLGCAASQYLAAAGVGNLTLLDF   56 (240)
T ss_pred             CCcEEEECcCHHHHHHHHHHHHcCCCEEEEEeC
Confidence            478999999999999999999999988888764

This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).

>PRK11036 putative S-adenosyl-L-methionine-dependent methyltransferase; Provisional

Probab=94.64  E-value=0.57  Score=41.34  Aligned_cols=95  Identities=23%  Similarity=0.317  Sum_probs=60.7

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHc----CCC-eEEecCCCcccHHHHHHHHHHHcCCC
Q 017916          180 GPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKEL----GAD-NIVKVSTNLQDIAEEVEKIQKAMGTG  254 (364)
Q Consensus       180 ~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~l----g~~-~~~~~~~~~~~~~~~i~~~~~~~~~~  254 (364)
                      .++.+||-.|+|. |..+..+++. |. .|++++.+++..+.+++.    |.. .+....   .+..    ++.....+.
T Consensus        43 ~~~~~vLDiGcG~-G~~a~~la~~-g~-~v~~vD~s~~~l~~a~~~~~~~g~~~~v~~~~---~d~~----~l~~~~~~~  112 (255)
T PRK11036         43 PRPLRVLDAGGGE-GQTAIKLAEL-GH-QVILCDLSAEMIQRAKQAAEAKGVSDNMQFIH---CAAQ----DIAQHLETP  112 (255)
T ss_pred             CCCCEEEEeCCCc-hHHHHHHHHc-CC-EEEEEECCHHHHHHHHHHHHhcCCccceEEEE---cCHH----HHhhhcCCC
Confidence            5567888888755 6777888875 66 689999999888777652    322 111111   1111    111112457


Q ss_pred             ccEEEECC-----CC-HHHHHHHHHhcccCCEEEEE
Q 017916          255 IDVSFDCA-----GF-NKTMSTALSATRAGGKVCLV  284 (364)
Q Consensus       255 ~d~vid~~-----g~-~~~~~~~~~~l~~~G~~v~~  284 (364)
                      +|+|+...     .. ...+..+.+.|+|+|+++.+
T Consensus       113 fD~V~~~~vl~~~~~~~~~l~~~~~~LkpgG~l~i~  148 (255)
T PRK11036        113 VDLILFHAVLEWVADPKSVLQTLWSVLRPGGALSLM  148 (255)
T ss_pred             CCEEEehhHHHhhCCHHHHHHHHHHHcCCCeEEEEE
Confidence            99998532     11 35678899999999999765

>PRK07791 short chain dehydrogenase; Provisional

Probab=94.63  E-value=0.4  Score=43.08  Aligned_cols=83  Identities=27%  Similarity=0.320  Sum_probs=48.5

Q ss_pred             CCCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecCh---------hH-HHHHHHc---CCCe-EEecCC-CcccHHHH
Q 017916          180 GPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDD---------YR-LSVAKEL---GADN-IVKVST-NLQDIAEE  243 (364)
Q Consensus       180 ~~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~---------~~-~~~~~~l---g~~~-~~~~~~-~~~~~~~~  243 (364)
                      -++.++||+|+ +++|.+.++.+...|++ ++.++.+.         ++ .+..+++   +... .+..|- ..++..+.
T Consensus         4 l~~k~~lITGas~GIG~aia~~la~~G~~-vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~   82 (286)
T PRK07791          4 LDGRVVIVTGAGGGIGRAHALAFAAEGAR-VVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGEAVANGDDIADWDGAANL   82 (286)
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCCE-EEEeeCCccccccccchhHHHHHHHHHHhcCCceEEEeCCCCCHHHHHHH
Confidence            35789999998 99999999988889995 55554432         22 2222332   3221 222221 22333444


Q ss_pred             HHHHHHHcCCCccEEEECCCC
Q 017916          244 VEKIQKAMGTGIDVSFDCAGF  264 (364)
Q Consensus       244 i~~~~~~~~~~~d~vid~~g~  264 (364)
                      ++...+. -+++|++|+++|.
T Consensus        83 ~~~~~~~-~g~id~lv~nAG~  102 (286)
T PRK07791         83 VDAAVET-FGGLDVLVNNAGI  102 (286)
T ss_pred             HHHHHHh-cCCCCEEEECCCC
Confidence            4444332 2479999998874

>PRK07067 sorbitol dehydrogenase; Provisional

Probab=94.62  E-value=0.37  Score=42.31  Aligned_cols=81  Identities=30%  Similarity=0.338  Sum_probs=50.7

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHH-HHcCCC-eEEecCC-CcccHHHHHHHHHHHcCCCcc
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KELGAD-NIVKVST-NLQDIAEEVEKIQKAMGTGID  256 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~-~~lg~~-~~~~~~~-~~~~~~~~i~~~~~~~~~~~d  256 (364)
                      .+.++||+|+ |.+|...++.+...|+ .|+.++++.++.+.+ .+++.. ..+..+- ...+..+.++.+... -+++|
T Consensus         5 ~~~~vlItGas~~iG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~~id   82 (257)
T PRK07067          5 QGKVALLTGAASGIGEAVAERYLAEGA-RVVIADIKPARARLAALEIGPAAIAVSLDVTRQDSIDRIVAAAVER-FGGID   82 (257)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHH-cCCCC
Confidence            3578999998 9999999999998999 567777776655433 344422 1222221 223334444443332 24799


Q ss_pred             EEEECCC
Q 017916          257 VSFDCAG  263 (364)
Q Consensus       257 ~vid~~g  263 (364)
                      ++|.+.|
T Consensus        83 ~li~~ag   89 (257)
T PRK07067         83 ILFNNAA   89 (257)
T ss_pred             EEEECCC
Confidence            9999876

>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP

Probab=94.59  E-value=0.45  Score=37.41  Aligned_cols=94  Identities=22%  Similarity=0.301  Sum_probs=57.4

Q ss_pred             CCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecCh-------------------hHHH----HHHHcCC-CeEEecCCCc
Q 017916          182 ETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDD-------------------YRLS----VAKELGA-DNIVKVSTNL  237 (364)
Q Consensus       182 g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~-------------------~~~~----~~~~lg~-~~~~~~~~~~  237 (364)
                      ..+|+|.|+|++|..++..+...|...+..+|...                   .|.+    .++++.. ..+..+..  
T Consensus         2 ~~~v~iiG~G~vGs~va~~L~~~Gv~~i~lvD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~np~~~v~~~~~--   79 (135)
T PF00899_consen    2 NKRVLIIGAGGVGSEVAKNLARSGVGKITLVDDDIVEPSNLNRQFLYTEEDVGKNKAEAAKERLQEINPDVEVEAIPE--   79 (135)
T ss_dssp             T-EEEEESTSHHHHHHHHHHHHHTTSEEEEEESSBB-GGGCCTCTTS-GGGTTSBHHHHHHHHHHHHSTTSEEEEEES--
T ss_pred             CCEEEEECcCHHHHHHHHHHHHhCCCceeecCCcceeecccccccccccccchhHHHHHHHHHHHHhcCceeeeeeec--
Confidence            46899999999999999999889998888886321                   1222    2333432 22222211  


Q ss_pred             ccH-HHHHHHHHHHcCCCccEEEECCCCHHHHHHHHHhcccCCEEE
Q 017916          238 QDI-AEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVC  282 (364)
Q Consensus       238 ~~~-~~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v  282 (364)
                       ++ .+...++.    .++|+||+|..+.+....+.+.++..+.-.
T Consensus        80 -~~~~~~~~~~~----~~~d~vi~~~d~~~~~~~l~~~~~~~~~p~  120 (135)
T PF00899_consen   80 -KIDEENIEELL----KDYDIVIDCVDSLAARLLLNEICREYGIPF  120 (135)
T ss_dssp             -HCSHHHHHHHH----HTSSEEEEESSSHHHHHHHHHHHHHTT-EE
T ss_pred             -ccccccccccc----cCCCEEEEecCCHHHHHHHHHHHHHcCCCE
Confidence             22 22233332    368999999998766666666666555433

Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....

>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins

Probab=94.57  E-value=0.84  Score=36.20  Aligned_cols=91  Identities=21%  Similarity=0.328  Sum_probs=53.8

Q ss_pred             EEEEEcCCHHHHHHHHHHHHCCCCEEEEEecCh-------------------hHH----HHHHHcCCC-eEEecCCCccc
Q 017916          184 NVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDD-------------------YRL----SVAKELGAD-NIVKVSTNLQD  239 (364)
Q Consensus       184 ~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~-------------------~~~----~~~~~lg~~-~~~~~~~~~~~  239 (364)
                      +|+|.|+|++|...+..+...|...+..++.+.                   .|.    +.++++... .+..++..-.+
T Consensus         1 ~VliiG~GglGs~ia~~L~~~Gv~~i~ivD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~~p~v~i~~~~~~~~~   80 (143)
T cd01483           1 RVLLVGLGGLGSEIALNLARSGVGKITLIDFDTVELSNLNRQFLARQADIGKPKAEVAARRLNELNPGVNVTAVPEGISE   80 (143)
T ss_pred             CEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCcCcchhhccccCChhHCCChHHHHHHHHHHHHCCCcEEEEEeeecCh
Confidence            588999999999999999999998888886431                   121    222333322 22112111000


Q ss_pred             HHHHHHHHHHHcCCCccEEEECCCCHHHHHHHHHhcccCCE
Q 017916          240 IAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGK  280 (364)
Q Consensus       240 ~~~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~  280 (364)
                       . ...+.    -.++|+||+|..+......+.+.++..+.
T Consensus        81 -~-~~~~~----~~~~diVi~~~d~~~~~~~l~~~~~~~~i  115 (143)
T cd01483          81 -D-NLDDF----LDGVDLVIDAIDNIAVRRALNRACKELGI  115 (143)
T ss_pred             -h-hHHHH----hcCCCEEEECCCCHHHHHHHHHHHHHcCC
Confidence             0 11111    25799999999976655555555555543

This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.

>PRK03612 spermidine synthase; Provisional

Probab=94.57  E-value=0.48  Score=46.50  Aligned_cols=101  Identities=14%  Similarity=0.111  Sum_probs=62.4

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcC-CCeEE--ecCC-----CcccHHHHHHHHHHHc
Q 017916          180 GPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELG-ADNIV--KVST-----NLQDIAEEVEKIQKAM  251 (364)
Q Consensus       180 ~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg-~~~~~--~~~~-----~~~~~~~~i~~~~~~~  251 (364)
                      ++.++||+.|+|. |..+..+++.-+.+.+..++.+++-.+.+++.. .....  .+++     ...|..    ++....
T Consensus       296 ~~~~rVL~IG~G~-G~~~~~ll~~~~v~~v~~VEid~~vi~~ar~~~~l~~~~~~~~~dprv~vi~~Da~----~~l~~~  370 (521)
T PRK03612        296 ARPRRVLVLGGGD-GLALREVLKYPDVEQVTLVDLDPAMTELARTSPALRALNGGALDDPRVTVVNDDAF----NWLRKL  370 (521)
T ss_pred             CCCCeEEEEcCCc-cHHHHHHHhCCCcCeEEEEECCHHHHHHHHhCCcchhhhccccCCCceEEEEChHH----HHHHhC
Confidence            5568999998754 566667777544468999999999888888721 10000  0000     012322    222223


Q ss_pred             CCCccEEEECCCC-----------HHHHHHHHHhcccCCEEEEEc
Q 017916          252 GTGIDVSFDCAGF-----------NKTMSTALSATRAGGKVCLVG  285 (364)
Q Consensus       252 ~~~~d~vid~~g~-----------~~~~~~~~~~l~~~G~~v~~g  285 (364)
                      .+++|+|+-....           .+.++.+.++|+++|.++.-.
T Consensus       371 ~~~fDvIi~D~~~~~~~~~~~L~t~ef~~~~~~~L~pgG~lv~~~  415 (521)
T PRK03612        371 AEKFDVIIVDLPDPSNPALGKLYSVEFYRLLKRRLAPDGLLVVQS  415 (521)
T ss_pred             CCCCCEEEEeCCCCCCcchhccchHHHHHHHHHhcCCCeEEEEec
Confidence            5689998743221           245678899999999988653

>PRK09242 tropinone reductase; Provisional

Probab=94.57  E-value=0.35  Score=42.49  Aligned_cols=82  Identities=24%  Similarity=0.274  Sum_probs=50.3

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHH-HHc-----CCCe-EEecCC-CcccHHHHHHHHHHHc
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KEL-----GADN-IVKVST-NLQDIAEEVEKIQKAM  251 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~-~~l-----g~~~-~~~~~~-~~~~~~~~i~~~~~~~  251 (364)
                      .+.++||+|+ |.+|...+..+...|+ .|+.+.++.++.+.+ .++     +... .+..+- ..++..+.+..+.+. 
T Consensus         8 ~~k~~lItGa~~gIG~~~a~~l~~~G~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-   85 (257)
T PRK09242          8 DGQTALITGASKGIGLAIAREFLGLGA-DVLIVARDADALAQARDELAEEFPEREVHGLAADVSDDEDRRAILDWVEDH-   85 (257)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHHH-
Confidence            4789999998 9999999999999999 466666666554332 222     2211 121221 123333334443332 


Q ss_pred             CCCccEEEECCCC
Q 017916          252 GTGIDVSFDCAGF  264 (364)
Q Consensus       252 ~~~~d~vid~~g~  264 (364)
                      -+++|++|.+.|.
T Consensus        86 ~g~id~li~~ag~   98 (257)
T PRK09242         86 WDGLHILVNNAGG   98 (257)
T ss_pred             cCCCCEEEECCCC
Confidence            2479999999874

>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated

Probab=94.56  E-value=0.58  Score=43.17  Aligned_cols=34  Identities=38%  Similarity=0.550  Sum_probs=30.3

Q ss_pred             CCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecC
Q 017916          182 ETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVD  215 (364)
Q Consensus       182 g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~  215 (364)
                      ..+|+|.|+|++|..+++.+...|...+..++.+
T Consensus        24 ~~~VlVvG~GglGs~va~~La~aGvg~i~lvD~D   57 (339)
T PRK07688         24 EKHVLIIGAGALGTANAEMLVRAGVGKVTIVDRD   57 (339)
T ss_pred             CCcEEEECCCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence            4789999999999999999999999888888764

>PRK08263 short chain dehydrogenase; Provisional

Probab=94.56  E-value=0.5  Score=42.06  Aligned_cols=81  Identities=22%  Similarity=0.225  Sum_probs=49.3

Q ss_pred             CCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHH-cCCC-eEEecCC-CcccHHHHHHHHHHHcCCCccE
Q 017916          182 ETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKE-LGAD-NIVKVST-NLQDIAEEVEKIQKAMGTGIDV  257 (364)
Q Consensus       182 g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~-lg~~-~~~~~~~-~~~~~~~~i~~~~~~~~~~~d~  257 (364)
                      +.+|||+|+ |.+|...++.+...|+ .|+.++++.++.+.+.. ++.. ..+..+- ..+++.+.+..+... -.++|.
T Consensus         3 ~k~vlItGasg~iG~~~a~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~~~d~   80 (275)
T PRK08263          3 EKVWFITGASRGFGRAWTEAALERGD-RVVATARDTATLADLAEKYGDRLLPLALDVTDRAAVFAAVETAVEH-FGRLDI   80 (275)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHhccCCeeEEEccCCCHHHHHHHHHHHHHH-cCCCCE
Confidence            458999998 9999999998888898 56777777665544333 3321 1222221 123333333333322 247899


Q ss_pred             EEECCCC
Q 017916          258 SFDCAGF  264 (364)
Q Consensus       258 vid~~g~  264 (364)
                      +|.++|.
T Consensus        81 vi~~ag~   87 (275)
T PRK08263         81 VVNNAGY   87 (275)
T ss_pred             EEECCCC
Confidence            9999874

>PLN02476 O-methyltransferase

Probab=94.54  E-value=1  Score=40.11  Aligned_cols=106  Identities=22%  Similarity=0.231  Sum_probs=68.1

Q ss_pred             cCCCCCCEEEEEcCCHHHHHHHHHHHHCCC-CEEEEEecChhHHHHHH----HcCCCeEEecCCCcccHHHHHHHHHHHc
Q 017916          177 ANIGPETNVLIMGAGPIGLVTMLGARAFGA-PRIVIVDVDDYRLSVAK----ELGADNIVKVSTNLQDIAEEVEKIQKAM  251 (364)
Q Consensus       177 ~~~~~g~~VLI~Gag~~G~~ai~la~~~g~-~~vv~~~~~~~~~~~~~----~lg~~~~~~~~~~~~~~~~~i~~~~~~~  251 (364)
                      .+.....+||-.|.+ +|..++.+|+.++. ..+++++.+++..+.++    +.|..+-+.+.  ..+..+.+.++....
T Consensus       114 ~~~~~ak~VLEIGT~-tGySal~lA~al~~~G~V~TiE~d~e~~~~Ar~n~~~aGl~~~I~li--~GdA~e~L~~l~~~~  190 (278)
T PLN02476        114 VQILGAERCIEVGVY-TGYSSLAVALVLPESGCLVACERDSNSLEVAKRYYELAGVSHKVNVK--HGLAAESLKSMIQNG  190 (278)
T ss_pred             HHhcCCCeEEEecCC-CCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEE--EcCHHHHHHHHHhcc
Confidence            445667899999863 36777788887642 26899999998876664    45654322221  134455555443211


Q ss_pred             -CCCccEEEECCCC---HHHHHHHHHhcccCCEEEEEc
Q 017916          252 -GTGIDVSFDCAGF---NKTMSTALSATRAGGKVCLVG  285 (364)
Q Consensus       252 -~~~~d~vid~~g~---~~~~~~~~~~l~~~G~~v~~g  285 (364)
                       .+.||.||--...   .+.+..+++.|++||.++.=+
T Consensus       191 ~~~~FD~VFIDa~K~~Y~~y~e~~l~lL~~GGvIV~DN  228 (278)
T PLN02476        191 EGSSYDFAFVDADKRMYQDYFELLLQLVRVGGVIVMDN  228 (278)
T ss_pred             cCCCCCEEEECCCHHHHHHHHHHHHHhcCCCcEEEEec
Confidence             2579998743332   356778899999999988644

>PRK08644 thiamine biosynthesis protein ThiF; Provisional

Probab=94.51  E-value=0.68  Score=39.61  Aligned_cols=35  Identities=29%  Similarity=0.395  Sum_probs=30.4

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecC
Q 017916          181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVD  215 (364)
Q Consensus       181 ~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~  215 (364)
                      ...+|+|.|+|++|..+++.+...|...+..+|.+
T Consensus        27 ~~~~V~ViG~GglGs~ia~~La~~Gvg~i~lvD~D   61 (212)
T PRK08644         27 KKAKVGIAGAGGLGSNIAVALARSGVGNLKLVDFD   61 (212)
T ss_pred             hCCCEEEECcCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence            34689999999999999999999999888888765

>PLN02781 Probable caffeoyl-CoA O-methyltransferase

Probab=94.51  E-value=0.82  Score=39.78  Aligned_cols=106  Identities=21%  Similarity=0.275  Sum_probs=67.0

Q ss_pred             cCCCCCCEEEEEcCCHHHHHHHHHHHHCC-CCEEEEEecChhHHHHHHH----cCCCeEEecCCCcccHHHHHHHHHHHc
Q 017916          177 ANIGPETNVLIMGAGPIGLVTMLGARAFG-APRIVIVDVDDYRLSVAKE----LGADNIVKVSTNLQDIAEEVEKIQKAM  251 (364)
Q Consensus       177 ~~~~~g~~VLI~Gag~~G~~ai~la~~~g-~~~vv~~~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~i~~~~~~~  251 (364)
                      .+..+..+||-.|.|. |..++.+++.++ ...+++++.+++..+.+++    .|...-+.+.  ..+..+.+..+....
T Consensus        64 ~~~~~~~~vLEiGt~~-G~s~l~la~~~~~~g~v~tiD~d~~~~~~A~~n~~~~gl~~~i~~~--~gda~~~L~~l~~~~  140 (234)
T PLN02781         64 VKIMNAKNTLEIGVFT-GYSLLTTALALPEDGRITAIDIDKEAYEVGLEFIKKAGVDHKINFI--QSDALSALDQLLNND  140 (234)
T ss_pred             HHHhCCCEEEEecCcc-cHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEE--EccHHHHHHHHHhCC
Confidence            4456678999988633 667777887653 4489999999987776654    4543222211  134444444443211


Q ss_pred             -CCCccEEEECCC---CHHHHHHHHHhcccCCEEEEEc
Q 017916          252 -GTGIDVSFDCAG---FNKTMSTALSATRAGGKVCLVG  285 (364)
Q Consensus       252 -~~~~d~vid~~g---~~~~~~~~~~~l~~~G~~v~~g  285 (364)
                       .+.||+||--..   -.+.+..+++.|++||.++.-+
T Consensus       141 ~~~~fD~VfiDa~k~~y~~~~~~~~~ll~~GG~ii~dn  178 (234)
T PLN02781        141 PKPEFDFAFVDADKPNYVHFHEQLLKLVKVGGIIAFDN  178 (234)
T ss_pred             CCCCCCEEEECCCHHHHHHHHHHHHHhcCCCeEEEEEc
Confidence             357999984332   1456778899999999887643

>PRK06914 short chain dehydrogenase; Provisional

Probab=94.51  E-value=0.48  Score=42.23  Aligned_cols=80  Identities=18%  Similarity=0.235  Sum_probs=48.3

Q ss_pred             CCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHH----HcCC---CeEEecCC-CcccHHHHHHHHHHHcC
Q 017916          182 ETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAK----ELGA---DNIVKVST-NLQDIAEEVEKIQKAMG  252 (364)
Q Consensus       182 g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~----~lg~---~~~~~~~~-~~~~~~~~i~~~~~~~~  252 (364)
                      +.++||+|+ |.+|...+..+...|+ .|++++++.++.+.+.    ..+.   ...+..+- ..+++.+ +.+.... -
T Consensus         3 ~k~~lItGasg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~-~~~~~~~-~   79 (280)
T PRK06914          3 KKIAIVTGASSGFGLLTTLELAKKGY-LVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHN-FQLVLKE-I   79 (280)
T ss_pred             CCEEEEECCCchHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHH-HHHHHHh-c
Confidence            568999998 9999999998888899 4666666665543332    2221   11222222 2233333 4444332 2


Q ss_pred             CCccEEEECCCC
Q 017916          253 TGIDVSFDCAGF  264 (364)
Q Consensus       253 ~~~d~vid~~g~  264 (364)
                      +++|+++.++|.
T Consensus        80 ~~id~vv~~ag~   91 (280)
T PRK06914         80 GRIDLLVNNAGY   91 (280)
T ss_pred             CCeeEEEECCcc
Confidence            478999998873

>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

Probab=94.50  E-value=0.43  Score=41.39  Aligned_cols=82  Identities=23%  Similarity=0.278  Sum_probs=49.4

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHH-HHcCCC-eEEecCCC-cccHHHHHHHHHHHcCCCcc
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KELGAD-NIVKVSTN-LQDIAEEVEKIQKAMGTGID  256 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~-~~lg~~-~~~~~~~~-~~~~~~~i~~~~~~~~~~~d  256 (364)
                      ++.++||+|+ |.+|...+..+...|+ .|+...++.++.+.+ ..++.. ..+..+-. .+++.+.+.++.+. -+++|
T Consensus         5 ~~~~vlItGa~g~iG~~la~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~~id   82 (245)
T PRK12936          5 SGRKALVTGASGGIGEEIARLLHAQGA-IVGLHGTRVEKLEALAAELGERVKIFPANLSDRDEVKALGQKAEAD-LEGVD   82 (245)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHH-cCCCC
Confidence            4679999998 9999999988888898 566665655554433 344432 12222211 22333333333222 24799


Q ss_pred             EEEECCCC
Q 017916          257 VSFDCAGF  264 (364)
Q Consensus       257 ~vid~~g~  264 (364)
                      ++|.++|.
T Consensus        83 ~vi~~ag~   90 (245)
T PRK12936         83 ILVNNAGI   90 (245)
T ss_pred             EEEECCCC
Confidence            99999873

>PRK06482 short chain dehydrogenase; Provisional

Probab=94.47  E-value=0.53  Score=41.87  Aligned_cols=80  Identities=21%  Similarity=0.202  Sum_probs=49.1

Q ss_pred             CEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHH-cCCC-eEEecCC-CcccHHHHHHHHHHHcCCCccEE
Q 017916          183 TNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKE-LGAD-NIVKVST-NLQDIAEEVEKIQKAMGTGIDVS  258 (364)
Q Consensus       183 ~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~-lg~~-~~~~~~~-~~~~~~~~i~~~~~~~~~~~d~v  258 (364)
                      .++||+|+ |.+|...++.+...|. .|+++.++.++.+.+++ ++.. ..+..+- ..+++.+.+.++.+. ..++|++
T Consensus         3 k~vlVtGasg~IG~~la~~L~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~~id~v   80 (276)
T PRK06482          3 KTWFITGASSGFGRGMTERLLARGD-RVAATVRRPDALDDLKARYGDRLWVLQLDVTDSAAVRAVVDRAFAA-LGRIDVV   80 (276)
T ss_pred             CEEEEecCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhccCceEEEEccCCCHHHHHHHHHHHHHH-cCCCCEE
Confidence            47999998 9999999988888898 56777777766554443 2321 1122221 122333334333322 3578999


Q ss_pred             EECCCC
Q 017916          259 FDCAGF  264 (364)
Q Consensus       259 id~~g~  264 (364)
                      |.++|.
T Consensus        81 i~~ag~   86 (276)
T PRK06482         81 VSNAGY   86 (276)
T ss_pred             EECCCC
Confidence            998873

>PF02670 DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; InterPro: IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase synthesises 2-C-methyl-D-erythritol 4-phosphate from 1-deoxy-D-xylulose 5-phosphate in a single step by intramolecular rearrangement and reduction and is responsible for terpenoid biosynthesis in some organisms []

Probab=94.47  E-value=0.48  Score=36.84  Aligned_cols=95  Identities=21%  Similarity=0.296  Sum_probs=55.6

Q ss_pred             EEEEcC-CHHHHHHHHHHHHCC--CCEEEEEecChh--H-HHHHHHcCCCeEEecCCCcccHHHHHHHHHH---------
Q 017916          185 VLIMGA-GPIGLVTMLGARAFG--APRIVIVDVDDY--R-LSVAKELGADNIVKVSTNLQDIAEEVEKIQK---------  249 (364)
Q Consensus       185 VLI~Ga-g~~G~~ai~la~~~g--~~~vv~~~~~~~--~-~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~---------  249 (364)
                      |.|.|+ |.+|..++.+.+...  + .|++......  + .+.++++.+..+...+.   +..+.++....         
T Consensus         1 i~ILGsTGSIG~qtLdVi~~~~d~f-~v~~Lsa~~n~~~L~~q~~~f~p~~v~i~~~---~~~~~l~~~~~~~~~~~~v~   76 (129)
T PF02670_consen    1 IAILGSTGSIGTQTLDVIRKHPDKF-EVVALSAGSNIEKLAEQAREFKPKYVVIADE---EAYEELKKALPSKGPGIEVL   76 (129)
T ss_dssp             EEEESTTSHHHHHHHHHHHHCTTTE-EEEEEEESSTHHHHHHHHHHHT-SEEEESSH---HHHHHHHHHHHHTTSSSEEE
T ss_pred             CEEEcCCcHHHHHHHHHHHhCCCce-EEEEEEcCCCHHHHHHHHHHhCCCEEEEcCH---HHHHHHHHHhhhcCCCCEEE
Confidence            578898 999999999999987  5 3455544322  2 34556788887765432   22222222211         


Q ss_pred             --------H-cCCCccEEEECCCCHHHHHHHHHhcccCCEEEE
Q 017916          250 --------A-MGTGIDVSFDCAGFNKTMSTALSATRAGGKVCL  283 (364)
Q Consensus       250 --------~-~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~  283 (364)
                              . ...++|+++.++-+-..+.-.+..++.+-++.+
T Consensus        77 ~G~~~l~~~~~~~~~D~vv~Ai~G~aGL~pt~~Ai~~gk~iaL  119 (129)
T PF02670_consen   77 SGPEGLEELAEEPEVDIVVNAIVGFAGLKPTLAAIKAGKDIAL  119 (129)
T ss_dssp             ESHHHHHHHHTHTT-SEEEE--SSGGGHHHHHHHHHTTSEEEE
T ss_pred             eChHHHHHHhcCCCCCEEEEeCcccchHHHHHHHHHCCCeEEE
Confidence                    0 125688888876656777777777776655543

In Arabidopsis thaliana 1-deoxy-D-xylulose 5-phosphate reductoisomerase is the first committed enzyme of the non-mevalonate pathway for isoprenoid biosynthesis. The enzyme requires Mn2+, Co2+ or Mg2+ for activity, with the first being most effective. This domain is found at the N terminus of bacterial and plant 1-deoxy-D-xylulose 5-phosphate reductoisomerases.; GO: 0070402 NADPH binding, 0055114 oxidation-reduction process; PDB: 1R0K_D 1R0L_C 3A14_A 3A06_A 3AUA_A 3AU9_B 3AU8_B 3IIE_A 2Y1D_B 4AIC_A ....

>cd01487 E1_ThiF_like E1_ThiF_like

Probab=94.47  E-value=0.57  Score=38.70  Aligned_cols=33  Identities=30%  Similarity=0.329  Sum_probs=28.3

Q ss_pred             EEEEEcCCHHHHHHHHHHHHCCCCEEEEEecCh
Q 017916          184 NVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDD  216 (364)
Q Consensus       184 ~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~  216 (364)
                      +|+|.|+|++|...++.+...|...+..+|.+.
T Consensus         1 ~VlViG~GglGs~ia~~La~~Gvg~i~lvD~D~   33 (174)
T cd01487           1 KVGIAGAGGLGSNIAVLLARSGVGNLKLVDFDV   33 (174)
T ss_pred             CEEEECcCHHHHHHHHHHHHcCCCeEEEEeCCE
Confidence            589999999999999999889998888887653

Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>PF01564 Spermine_synth: Spermine/spermidine synthase; InterPro: IPR001045 Synonym(s): Spermidine aminopropyltransferase A group of polyamine biosynthetic enzymes involved in the fifth (last) step in the biosynthesis of spermidine from arginine and methionine which includes; spermidine synthase (2

Probab=94.46  E-value=0.4  Score=42.05  Aligned_cols=95  Identities=20%  Similarity=0.204  Sum_probs=62.4

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCC----C------eEEecCCCcccHHHHHHHHHHH
Q 017916          181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGA----D------NIVKVSTNLQDIAEEVEKIQKA  250 (364)
Q Consensus       181 ~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~----~------~~~~~~~~~~~~~~~i~~~~~~  250 (364)
                      +..+|||.|+|. |..+-.+++....+.+.+++-+++-.+.++++-.    .      .++.     .|-.    .+.+.
T Consensus        76 ~p~~VLiiGgG~-G~~~~ell~~~~~~~i~~VEiD~~Vv~~a~~~f~~~~~~~~d~r~~i~~-----~Dg~----~~l~~  145 (246)
T PF01564_consen   76 NPKRVLIIGGGD-GGTARELLKHPPVESITVVEIDPEVVELARKYFPEFSEGLDDPRVRIII-----GDGR----KFLKE  145 (246)
T ss_dssp             ST-EEEEEESTT-SHHHHHHTTSTT-SEEEEEES-HHHHHHHHHHTHHHHTTGGSTTEEEEE-----STHH----HHHHT
T ss_pred             CcCceEEEcCCC-hhhhhhhhhcCCcceEEEEecChHHHHHHHHhchhhccccCCCceEEEE-----hhhH----HHHHh
Confidence            678999998655 5566677777767789999999988888876421    0      1221     2322    23333


Q ss_pred             cCC-CccEEE-ECCC---------CHHHHHHHHHhcccCCEEEEEc
Q 017916          251 MGT-GIDVSF-DCAG---------FNKTMSTALSATRAGGKVCLVG  285 (364)
Q Consensus       251 ~~~-~~d~vi-d~~g---------~~~~~~~~~~~l~~~G~~v~~g  285 (364)
                      ... ++|+|| |...         +.+.++.+.++|+++|.++.-.
T Consensus       146 ~~~~~yDvIi~D~~dp~~~~~~l~t~ef~~~~~~~L~~~Gv~v~~~  191 (246)
T PF01564_consen  146 TQEEKYDVIIVDLTDPDGPAPNLFTREFYQLCKRRLKPDGVLVLQA  191 (246)
T ss_dssp             SSST-EEEEEEESSSTTSCGGGGSSHHHHHHHHHHEEEEEEEEEEE
T ss_pred             ccCCcccEEEEeCCCCCCCcccccCHHHHHHHHhhcCCCcEEEEEc
Confidence            345 899987 5543         3578899999999999998754

5.1.16 from EC), spermine synthase (2.5.1.22 from EC) and putrescine N-methyltransferase (2.1.1.53 from EC) []. The Thermotoga maritima spermidine synthase monomer consists of two domains: an N-terminal domain composed of six beta-strands, and a Rossmann-like C- terminal domain []. The larger C-terminal catalytic core domain consists of a seven-stranded beta-sheet flanked by nine alpha helices. This domain resembles a topology observed in a number of nucleotide and dinucleotide-binding enzymes, and in S-adenosyl-L-methionine (AdoMet)- dependent methyltransferase (MTases) [].; GO: 0003824 catalytic activity; PDB: 2E5W_C 2ZSU_E 2O0L_B 2O05_B 2O06_B 2O07_B 3RW9_B 2PWP_A 2HTE_B 3RIE_B ....

>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional

Probab=94.45  E-value=0.62  Score=40.86  Aligned_cols=34  Identities=26%  Similarity=0.407  Sum_probs=29.7

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEec
Q 017916          181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDV  214 (364)
Q Consensus       181 ~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~  214 (364)
                      ...+|+|.|+|++|..++..+...|...+..++.
T Consensus        31 ~~~~VliiG~GglGs~va~~La~~Gvg~i~lvD~   64 (245)
T PRK05690         31 KAARVLVVGLGGLGCAASQYLAAAGVGTLTLVDF   64 (245)
T ss_pred             cCCeEEEECCCHHHHHHHHHHHHcCCCEEEEEcC
Confidence            3479999999999999999999999988888764

>PRK12367 short chain dehydrogenase; Provisional

Probab=94.45  E-value=0.33  Score=42.56  Aligned_cols=75  Identities=21%  Similarity=0.257  Sum_probs=44.3

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecCh-hHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcCCCccEE
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDD-YRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVS  258 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~-~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~v  258 (364)
                      .+.++||+|+ |++|.+.++.+...|+ .|++++++. ++.+.... +....+..+-.  +. +.+.+.    -+++|++
T Consensus        13 ~~k~~lITGas~gIG~ala~~l~~~G~-~Vi~~~r~~~~~~~~~~~-~~~~~~~~D~~--~~-~~~~~~----~~~iDil   83 (245)
T PRK12367         13 QGKRIGITGASGALGKALTKAFRAKGA-KVIGLTHSKINNSESNDE-SPNEWIKWECG--KE-ESLDKQ----LASLDVL   83 (245)
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCC-EEEEEECCchhhhhhhcc-CCCeEEEeeCC--CH-HHHHHh----cCCCCEE
Confidence            3679999998 9999999999888999 566666554 22221111 11122222221  11 122222    2469999


Q ss_pred             EECCCC
Q 017916          259 FDCAGF  264 (364)
Q Consensus       259 id~~g~  264 (364)
                      |+++|.
T Consensus        84 VnnAG~   89 (245)
T PRK12367         84 ILNHGI   89 (245)
T ss_pred             EECCcc
Confidence            999874

>PRK05884 short chain dehydrogenase; Provisional

Probab=94.44  E-value=0.27  Score=42.40  Aligned_cols=75  Identities=23%  Similarity=0.331  Sum_probs=46.1

Q ss_pred             EEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHH-HHcCCCeEEecCCCcccHHHHHHHHHHHcCCCccEEEEC
Q 017916          184 NVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDC  261 (364)
Q Consensus       184 ~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~-~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid~  261 (364)
                      +++|+|+ +.+|.+.++.+...|+ .|+.+.++.++.+.+ ++++... +..+-.++   +.++++.+.....+|++|++
T Consensus         2 ~vlItGas~giG~~ia~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~-~~~D~~~~---~~v~~~~~~~~~~id~lv~~   76 (223)
T PRK05884          2 EVLVTGGDTDLGRTIAEGFRNDGH-KVTLVGARRDDLEVAAKELDVDA-IVCDNTDP---ASLEEARGLFPHHLDTIVNV   76 (223)
T ss_pred             eEEEEeCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhccCcE-EecCCCCH---HHHHHHHHHHhhcCcEEEEC
Confidence            5899988 9999999999988899 566677776665433 4455432 22222211   12333322222368999988


Q ss_pred             CC
Q 017916          262 AG  263 (364)
Q Consensus       262 ~g  263 (364)
                      .|
T Consensus        77 ag   78 (223)
T PRK05884         77 PA   78 (223)
T ss_pred             CC
Confidence            65

>PRK06523 short chain dehydrogenase; Provisional

Probab=94.44  E-value=0.36  Score=42.50  Aligned_cols=76  Identities=20%  Similarity=0.216  Sum_probs=45.8

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCC-CeEEecCCC-cccHHHHHHHHHHHcCCCccE
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGA-DNIVKVSTN-LQDIAEEVEKIQKAMGTGIDV  257 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~-~~~~~~~~~-~~~~~~~i~~~~~~~~~~~d~  257 (364)
                      +|.++||+|+ |.+|...++.+...|+ .|+.+.++..+.     ++. ...+..+-. .+++.+.+..+... -+++|+
T Consensus         8 ~~k~vlItGas~gIG~~ia~~l~~~G~-~v~~~~r~~~~~-----~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~~id~   80 (260)
T PRK06523          8 AGKRALVTGGTKGIGAATVARLLEAGA-RVVTTARSRPDD-----LPEGVEFVAADLTTAEGCAAVARAVLER-LGGVDI   80 (260)
T ss_pred             CCCEEEEECCCCchhHHHHHHHHHCCC-EEEEEeCChhhh-----cCCceeEEecCCCCHHHHHHHHHHHHHH-cCCCCE
Confidence            4789999998 9999999999888999 466666554321     111 111222221 12233333333222 347999


Q ss_pred             EEECCC
Q 017916          258 SFDCAG  263 (364)
Q Consensus       258 vid~~g  263 (364)
                      +|+++|
T Consensus        81 vi~~ag   86 (260)
T PRK06523         81 LVHVLG   86 (260)
T ss_pred             EEECCc
Confidence            999887

>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional

Probab=94.42  E-value=0.68  Score=42.71  Aligned_cols=34  Identities=35%  Similarity=0.537  Sum_probs=30.1

Q ss_pred             CCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecC
Q 017916          182 ETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVD  215 (364)
Q Consensus       182 g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~  215 (364)
                      +.+|+|.|+|++|..++..+...|...+..+|.+
T Consensus        24 ~~~VlIiG~GglGs~va~~La~aGvg~i~lvD~D   57 (338)
T PRK12475         24 EKHVLIVGAGALGAANAEALVRAGIGKLTIADRD   57 (338)
T ss_pred             CCcEEEECCCHHHHHHHHHHHHcCCCEEEEEcCC
Confidence            4689999999999999999999999888888764

>PRK09134 short chain dehydrogenase; Provisional

Probab=94.41  E-value=0.53  Score=41.37  Aligned_cols=83  Identities=20%  Similarity=0.194  Sum_probs=47.0

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHH-HHHH---cCCC-eEEecCCC-cccHHHHHHHHHHHcCC
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLS-VAKE---LGAD-NIVKVSTN-LQDIAEEVEKIQKAMGT  253 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~-~~~~---lg~~-~~~~~~~~-~~~~~~~i~~~~~~~~~  253 (364)
                      .+.++||+|+ |.+|...++.+...|+++++....+.++.+ ..++   .+.. ..+..+-. .+++.+.+...... .+
T Consensus         8 ~~k~vlItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~-~~   86 (258)
T PRK09134          8 APRAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEALAAEIRALGRRAVALQADLADEAEVRALVARASAA-LG   86 (258)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHH-cC
Confidence            4678999998 999999998888899954444433333332 2222   2332 12222211 22333333333222 24


Q ss_pred             CccEEEECCCC
Q 017916          254 GIDVSFDCAGF  264 (364)
Q Consensus       254 ~~d~vid~~g~  264 (364)
                      ++|++|.++|.
T Consensus        87 ~iD~vi~~ag~   97 (258)
T PRK09134         87 PITLLVNNASL   97 (258)
T ss_pred             CCCEEEECCcC
Confidence            79999999873

>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional

Probab=94.41  E-value=0.44  Score=41.40  Aligned_cols=81  Identities=16%  Similarity=0.158  Sum_probs=46.9

Q ss_pred             CEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHH-HH---HHcCCC-eEEecCCC-cccHHHHHHHHHHHcCCCc
Q 017916          183 TNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLS-VA---KELGAD-NIVKVSTN-LQDIAEEVEKIQKAMGTGI  255 (364)
Q Consensus       183 ~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~-~~---~~lg~~-~~~~~~~~-~~~~~~~i~~~~~~~~~~~  255 (364)
                      .++||+|+ |.+|...+..+...|+++++...++.++.+ ..   +..+.. ..+..+-. .+++.+.++.+.+ ..+++
T Consensus         2 ~~~lItGa~g~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~-~~~~i   80 (247)
T PRK09730          2 AIALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLITQAGGKAFVLQADISDENQVVAMFTAIDQ-HDEPL   80 (247)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhCCCeEEEEEccCCCHHHHHHHHHHHHH-hCCCC
Confidence            37899998 999999999888899964444445444332 22   222321 12222221 2233333443332 24579


Q ss_pred             cEEEECCCC
Q 017916          256 DVSFDCAGF  264 (364)
Q Consensus       256 d~vid~~g~  264 (364)
                      |++|.++|.
T Consensus        81 d~vi~~ag~   89 (247)
T PRK09730         81 AALVNNAGI   89 (247)
T ss_pred             CEEEECCCC
Confidence            999999874

>PRK06718 precorrin-2 dehydrogenase; Reviewed

Probab=94.40  E-value=1.2  Score=37.84  Aligned_cols=90  Identities=12%  Similarity=0.154  Sum_probs=50.9

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChh-H-HHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcCCCccEE
Q 017916          181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDY-R-LSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVS  258 (364)
Q Consensus       181 ~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~-~-~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~v  258 (364)
                      .|.+|||.|+|.+|...+..+...|+ .|.+++.... . .+++.. +.-...   ..  .+..       ..-.++|+|
T Consensus         9 ~~k~vLVIGgG~va~~ka~~Ll~~ga-~V~VIs~~~~~~l~~l~~~-~~i~~~---~~--~~~~-------~~l~~adlV   74 (202)
T PRK06718          9 SNKRVVIVGGGKVAGRRAITLLKYGA-HIVVISPELTENLVKLVEE-GKIRWK---QK--EFEP-------SDIVDAFLV   74 (202)
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEcCCCCHHHHHHHhC-CCEEEE---ec--CCCh-------hhcCCceEE
Confidence            46899999999999998888888998 4566643321 1 122222 211111   11  1110       012468999


Q ss_pred             EECCCCHHHHHHHHHhcccCCEEEEEc
Q 017916          259 FDCAGFNKTMSTALSATRAGGKVCLVG  285 (364)
Q Consensus       259 id~~g~~~~~~~~~~~l~~~G~~v~~g  285 (364)
                      |-|+++++. +..+......+.++...
T Consensus        75 iaaT~d~el-N~~i~~~a~~~~lvn~~  100 (202)
T PRK06718         75 IAATNDPRV-NEQVKEDLPENALFNVI  100 (202)
T ss_pred             EEcCCCHHH-HHHHHHHHHhCCcEEEC
Confidence            999996554 44433333445555543

>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]

Probab=94.38  E-value=0.4  Score=45.00  Aligned_cols=73  Identities=23%  Similarity=0.328  Sum_probs=55.3

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHH-HHHHcCCCeEEecCCCcccHHHHHHHHHHHcCCCccEE
Q 017916          180 GPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLS-VAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVS  258 (364)
Q Consensus       180 ~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~-~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~v  258 (364)
                      -.+.+|||.|+|-+|..++..+...|...++++.++.+|.. +++++|+..+ .++    +    +...    -..+|+|
T Consensus       176 L~~~~vlvIGAGem~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~~~~~~-~l~----e----l~~~----l~~~DvV  242 (414)
T COG0373         176 LKDKKVLVIGAGEMGELVAKHLAEKGVKKITIANRTLERAEELAKKLGAEAV-ALE----E----LLEA----LAEADVV  242 (414)
T ss_pred             cccCeEEEEcccHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHhCCeee-cHH----H----HHHh----hhhCCEE
Confidence            46789999999999999999999999888888888887754 6788995432 221    1    2112    1468999


Q ss_pred             EECCCCH
Q 017916          259 FDCAGFN  265 (364)
Q Consensus       259 id~~g~~  265 (364)
                      |.+++++
T Consensus       243 issTsa~  249 (414)
T COG0373         243 ISSTSAP  249 (414)
T ss_pred             EEecCCC
Confidence            9998875

>PRK12938 acetyacetyl-CoA reductase; Provisional

Probab=94.37  E-value=0.56  Score=40.83  Aligned_cols=83  Identities=19%  Similarity=0.224  Sum_probs=48.0

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecCh-hHHHHHH---HcCCCeE-EecCC-CcccHHHHHHHHHHHcCC
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDD-YRLSVAK---ELGADNI-VKVST-NLQDIAEEVEKIQKAMGT  253 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~-~~~~~~~---~lg~~~~-~~~~~-~~~~~~~~i~~~~~~~~~  253 (364)
                      ++.++||+|+ |.+|...++.+...|+++++....+. .+.+.++   ..+.... +..+- ..+++.+.+.+..+. .+
T Consensus         2 ~~k~~lVtG~s~giG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~   80 (246)
T PRK12938          2 SQRIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVGDWDSTKAAFDKVKAE-VG   80 (246)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH-hC
Confidence            3568899998 99999999999999996444343333 2223333   3343321 11221 122333333333332 25


Q ss_pred             CccEEEECCCC
Q 017916          254 GIDVSFDCAGF  264 (364)
Q Consensus       254 ~~d~vid~~g~  264 (364)
                      ++|++|.++|.
T Consensus        81 ~id~li~~ag~   91 (246)
T PRK12938         81 EIDVLVNNAGI   91 (246)
T ss_pred             CCCEEEECCCC
Confidence            79999999874

>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated

Probab=94.31  E-value=0.62  Score=40.87  Aligned_cols=82  Identities=18%  Similarity=0.233  Sum_probs=48.9

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHH----HHcCCC-eEEecCCC-cccHHHHHHHHHHHcCC
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA----KELGAD-NIVKVSTN-LQDIAEEVEKIQKAMGT  253 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~----~~lg~~-~~~~~~~~-~~~~~~~i~~~~~~~~~  253 (364)
                      .+.+|||+|+ +.+|...+..+...|++ ++.++++.++.+.+    +..+.. ..+..|-. .++..+.++.+.+. -+
T Consensus        10 ~~k~vlVtG~s~gIG~~la~~l~~~G~~-vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~-~~   87 (255)
T PRK06113         10 DGKCAIITGAGAGIGKEIAITFATAGAS-VVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFALSK-LG   87 (255)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCe-EEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH-cC
Confidence            4789999998 99999999988889995 55565655544322    222322 12222221 12333333333322 24


Q ss_pred             CccEEEECCCC
Q 017916          254 GIDVSFDCAGF  264 (364)
Q Consensus       254 ~~d~vid~~g~  264 (364)
                      ++|++|.++|.
T Consensus        88 ~~d~li~~ag~   98 (255)
T PRK06113         88 KVDILVNNAGG   98 (255)
T ss_pred             CCCEEEECCCC
Confidence            79999998873

>PRK07097 gluconate 5-dehydrogenase; Provisional

Probab=94.29  E-value=0.64  Score=41.07  Aligned_cols=82  Identities=26%  Similarity=0.287  Sum_probs=49.0

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHH----HHHcCCC-eEEecCCC-cccHHHHHHHHHHHcCC
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSV----AKELGAD-NIVKVSTN-LQDIAEEVEKIQKAMGT  253 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~----~~~lg~~-~~~~~~~~-~~~~~~~i~~~~~~~~~  253 (364)
                      .+.++||+|+ +.+|.+.+..+...|++ ++.+.+++++.+.    ++..+.. ..+..|-. .++..+.+..+... -+
T Consensus         9 ~~k~~lItGa~~~iG~~ia~~l~~~G~~-vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-~~   86 (265)
T PRK07097          9 KGKIALITGASYGIGFAIAKAYAKAGAT-IVFNDINQELVDKGLAAYRELGIEAHGYVCDVTDEDGVQAMVSQIEKE-VG   86 (265)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCe-EEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHh-CC
Confidence            5678999998 99999988888889995 5666666655432    2233432 12222222 12223333333222 24


Q ss_pred             CccEEEECCCC
Q 017916          254 GIDVSFDCAGF  264 (364)
Q Consensus       254 ~~d~vid~~g~  264 (364)
                      ++|++|.++|.
T Consensus        87 ~id~li~~ag~   97 (265)
T PRK07097         87 VIDILVNNAGI   97 (265)
T ss_pred             CCCEEEECCCC
Confidence            69999998874

>PRK10901 16S rRNA methyltransferase B; Provisional

Probab=94.28  E-value=1.2  Score=42.49  Aligned_cols=107  Identities=20%  Similarity=0.230  Sum_probs=65.1

Q ss_pred             HHHHHHHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHH----HcCCCe-EEecCCCcccHHHHH
Q 017916          170 GLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAK----ELGADN-IVKVSTNLQDIAEEV  244 (364)
Q Consensus       170 a~~~l~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~----~lg~~~-~~~~~~~~~~~~~~i  244 (364)
                      +...+....+++|++||=.|+|. |..+..+++..+...|++++.++++.+.++    .+|... ++..+.  .+    +
T Consensus       233 s~~~~~~l~~~~g~~VLDlgaG~-G~~t~~la~~~~~~~v~a~D~s~~~l~~~~~n~~~~g~~~~~~~~D~--~~----~  305 (427)
T PRK10901        233 AQLAATLLAPQNGERVLDACAAP-GGKTAHILELAPQAQVVALDIDAQRLERVRENLQRLGLKATVIVGDA--RD----P  305 (427)
T ss_pred             HHHHHHHcCCCCCCEEEEeCCCC-ChHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEcCc--cc----c
Confidence            33334556778999999887644 445556666654347999999998876654    345432 222111  11    1


Q ss_pred             HHHHHHcCCCccEEE-E--CCCCH-------------------------HHHHHHHHhcccCCEEEEEc
Q 017916          245 EKIQKAMGTGIDVSF-D--CAGFN-------------------------KTMSTALSATRAGGKVCLVG  285 (364)
Q Consensus       245 ~~~~~~~~~~~d~vi-d--~~g~~-------------------------~~~~~~~~~l~~~G~~v~~g  285 (364)
                      ..+.  ....+|.|+ |  |.+.+                         ..+..+++.|+|||+++...
T Consensus       306 ~~~~--~~~~fD~Vl~D~Pcs~~G~~~~~p~~~~~~~~~~l~~l~~~q~~iL~~a~~~LkpGG~lvyst  372 (427)
T PRK10901        306 AQWW--DGQPFDRILLDAPCSATGVIRRHPDIKWLRRPEDIAALAALQSEILDALWPLLKPGGTLLYAT  372 (427)
T ss_pred             hhhc--ccCCCCEEEECCCCCcccccccCccccccCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEe
Confidence            1111  134699987 3  33321                         36778888999999998664

>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional

Probab=94.28  E-value=0.52  Score=41.63  Aligned_cols=82  Identities=21%  Similarity=0.312  Sum_probs=47.6

Q ss_pred             CCCEEEEEcC---CHHHHHHHHHHHHCCCCEEEEEecC---hhHHH-HHHHcCCCeEEecCC-CcccHHHHHHHHHHHcC
Q 017916          181 PETNVLIMGA---GPIGLVTMLGARAFGAPRIVIVDVD---DYRLS-VAKELGADNIVKVST-NLQDIAEEVEKIQKAMG  252 (364)
Q Consensus       181 ~g~~VLI~Ga---g~~G~~ai~la~~~g~~~vv~~~~~---~~~~~-~~~~lg~~~~~~~~~-~~~~~~~~i~~~~~~~~  252 (364)
                      .+.++||+|+   +++|.+.++.+...|++ |+.+...   .++.+ +.++++....+..|- ..++..+.+..+.... 
T Consensus         5 ~~k~vlItGas~~~GIG~a~a~~l~~~G~~-v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~-   82 (260)
T PRK06997          5 AGKRILITGLLSNRSIAYGIAKACKREGAE-LAFTYVGDRFKDRITEFAAEFGSDLVFPCDVASDEQIDALFASLGQHW-   82 (260)
T ss_pred             CCcEEEEeCCCCCCcHHHHHHHHHHHCCCe-EEEEccchHHHHHHHHHHHhcCCcceeeccCCCHHHHHHHHHHHHHHh-
Confidence            4689999984   58999998888889995 4444322   23322 234445322222222 2234444444443322 


Q ss_pred             CCccEEEECCCC
Q 017916          253 TGIDVSFDCAGF  264 (364)
Q Consensus       253 ~~~d~vid~~g~  264 (364)
                      +++|++|+++|.
T Consensus        83 g~iD~lvnnAG~   94 (260)
T PRK06997         83 DGLDGLVHSIGF   94 (260)
T ss_pred             CCCcEEEEcccc
Confidence            579999998763

>PRK06125 short chain dehydrogenase; Provisional

Probab=94.27  E-value=0.6  Score=41.09  Aligned_cols=79  Identities=27%  Similarity=0.344  Sum_probs=48.9

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHH-HHc----CCC-eEEecCCCcccHHHHHHHHHHHcCC
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KEL----GAD-NIVKVSTNLQDIAEEVEKIQKAMGT  253 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~-~~l----g~~-~~~~~~~~~~~~~~~i~~~~~~~~~  253 (364)
                      .+.++||+|+ +++|...++.+...|+ .|+.++++.++.+.+ +++    +.. ..+..+-.  + .+.++.+.... +
T Consensus         6 ~~k~vlItG~~~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~--~-~~~~~~~~~~~-g   80 (259)
T PRK06125          6 AGKRVLITGASKGIGAAAAEAFAAEGC-HLHLVARDADALEALAADLRAAHGVDVAVHALDLS--S-PEAREQLAAEA-G   80 (259)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCC--C-HHHHHHHHHHh-C
Confidence            4689999998 9999999998888999 677777766554332 222    221 22222221  1 22233333322 4


Q ss_pred             CccEEEECCCC
Q 017916          254 GIDVSFDCAGF  264 (364)
Q Consensus       254 ~~d~vid~~g~  264 (364)
                      ++|++|.+.|.
T Consensus        81 ~id~lv~~ag~   91 (259)
T PRK06125         81 DIDILVNNAGA   91 (259)
T ss_pred             CCCEEEECCCC
Confidence            79999998873

>PRK08303 short chain dehydrogenase; Provisional

Probab=94.26  E-value=0.63  Score=42.29  Aligned_cols=81  Identities=19%  Similarity=0.240  Sum_probs=47.7

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecCh----------hHH----HHHHHcCCC-eEEecCC-CcccHHHH
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDD----------YRL----SVAKELGAD-NIVKVST-NLQDIAEE  243 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~----------~~~----~~~~~lg~~-~~~~~~~-~~~~~~~~  243 (364)
                      .+.++||+|+ +++|.++++.+...|++ |+.+.++.          ++.    +.++..+.. ..+..|- ..++..+.
T Consensus         7 ~~k~~lITGgs~GIG~aia~~la~~G~~-Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~   85 (305)
T PRK08303          7 RGKVALVAGATRGAGRGIAVELGAAGAT-VYVTGRSTRARRSEYDRPETIEETAELVTAAGGRGIAVQVDHLVPEQVRAL   85 (305)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCE-EEEEecccccccccccccchHHHHHHHHHhcCCceEEEEcCCCCHHHHHHH
Confidence            4679999998 89999999999999994 55555542          222    222333432 1222221 22333334


Q ss_pred             HHHHHHHcCCCccEEEECC-C
Q 017916          244 VEKIQKAMGTGIDVSFDCA-G  263 (364)
Q Consensus       244 i~~~~~~~~~~~d~vid~~-g  263 (364)
                      +..+.+. -+++|++|+++ |
T Consensus        86 ~~~~~~~-~g~iDilVnnA~g  105 (305)
T PRK08303         86 VERIDRE-QGRLDILVNDIWG  105 (305)
T ss_pred             HHHHHHH-cCCccEEEECCcc
Confidence            4433332 24799999988 5

>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2

Probab=94.25  E-value=1  Score=38.18  Aligned_cols=34  Identities=26%  Similarity=0.490  Sum_probs=29.7

Q ss_pred             CCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecC
Q 017916          182 ETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVD  215 (364)
Q Consensus       182 g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~  215 (364)
                      ..+|+|.|+|++|...++.+.+.|...+..+|.+
T Consensus        21 ~~~V~IvG~GglGs~ia~~La~~Gvg~i~lvD~D   54 (200)
T TIGR02354        21 QATVAICGLGGLGSNVAINLARAGIGKLILVDFD   54 (200)
T ss_pred             CCcEEEECcCHHHHHHHHHHHHcCCCEEEEECCC
Confidence            4789999999999999999999999878888765

Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.

>COG0144 Sun tRNA and rRNA cytosine-C5-methylases [Translation, ribosomal structure and biogenesis]

Probab=94.22  E-value=0.77  Score=42.66  Aligned_cols=103  Identities=30%  Similarity=0.412  Sum_probs=64.1

Q ss_pred             HHcCCCCCCEEEEE-cC-CHHHHHHHHHHHHC---CCCEEEEEecChhHHHHH----HHcCCCeEEecCCCcccHHHHHH
Q 017916          175 RRANIGPETNVLIM-GA-GPIGLVTMLGARAF---GAPRIVIVDVDDYRLSVA----KELGADNIVKVSTNLQDIAEEVE  245 (364)
Q Consensus       175 ~~~~~~~g~~VLI~-Ga-g~~G~~ai~la~~~---g~~~vv~~~~~~~~~~~~----~~lg~~~~~~~~~~~~~~~~~i~  245 (364)
                      ...+.++|++||=. .| |+   =+.++|..+   |. .|++.+.+++|...+    +.+|+..+.........+.+   
T Consensus       150 ~~L~p~pge~VlD~cAAPGG---KTthla~~~~~~~~-iV~A~D~~~~Rl~~l~~nl~RlG~~nv~~~~~d~~~~~~---  222 (355)
T COG0144         150 LVLDPKPGERVLDLCAAPGG---KTTHLAELMENEGA-IVVAVDVSPKRLKRLRENLKRLGVRNVIVVNKDARRLAE---  222 (355)
T ss_pred             HHcCCCCcCEEEEECCCCCC---HHHHHHHhcCCCCc-eEEEEcCCHHHHHHHHHHHHHcCCCceEEEecccccccc---
Confidence            56888999999987 44 54   334455444   44 579999999887654    56898853332221111111   


Q ss_pred             HHHHHcCCCccEEE-E--CCCCH-------------------------HHHHHHHHhcccCCEEEEEcC
Q 017916          246 KIQKAMGTGIDVSF-D--CAGFN-------------------------KTMSTALSATRAGGKVCLVGM  286 (364)
Q Consensus       246 ~~~~~~~~~~d~vi-d--~~g~~-------------------------~~~~~~~~~l~~~G~~v~~g~  286 (364)
                      .+.  .+..||.|+ |  |+|++                         +.+..+++.|++||+++..-.
T Consensus       223 ~~~--~~~~fD~iLlDaPCSg~G~irr~Pd~~~~~~~~~i~~l~~lQ~~iL~~a~~~lk~GG~LVYSTC  289 (355)
T COG0144         223 LLP--GGEKFDRILLDAPCSGTGVIRRDPDVKWRRTPEDIAELAKLQKEILAAALKLLKPGGVLVYSTC  289 (355)
T ss_pred             ccc--ccCcCcEEEECCCCCCCcccccCccccccCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEcc
Confidence            110  022488876 5  66643                         477788999999999987653

>TIGR02752 MenG_heptapren 2-heptaprenyl-1,4-naphthoquinone methyltransferase

Probab=94.21  E-value=0.65  Score=40.15  Aligned_cols=103  Identities=20%  Similarity=0.282  Sum_probs=64.9

Q ss_pred             HHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCC-CEEEEEecChhHHHHHHH----cCCCeEEecCCCcccHHHHHHHHHH
Q 017916          175 RRANIGPETNVLIMGAGPIGLVTMLGARAFGA-PRIVIVDVDDYRLSVAKE----LGADNIVKVSTNLQDIAEEVEKIQK  249 (364)
Q Consensus       175 ~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~-~~vv~~~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~i~~~~~  249 (364)
                      ....++++++||-.|+|. |..+..+++..+. ..+++++.+++..+.+++    .+.+.+.....   +..    .+. 
T Consensus        39 ~~l~~~~~~~vLDiGcG~-G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~v~~~~~---d~~----~~~-  109 (231)
T TIGR02752        39 KRMNVQAGTSALDVCCGT-ADWSIALAEAVGPEGHVIGLDFSENMLSVGRQKVKDAGLHNVELVHG---NAM----ELP-  109 (231)
T ss_pred             HhcCCCCCCEEEEeCCCc-CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEEe---chh----cCC-
Confidence            456778899999998754 5677788877643 379999999887766653    23322111111   110    010 


Q ss_pred             HcCCCccEEEECCC------CHHHHHHHHHhcccCCEEEEEcC
Q 017916          250 AMGTGIDVSFDCAG------FNKTMSTALSATRAGGKVCLVGM  286 (364)
Q Consensus       250 ~~~~~~d~vid~~g------~~~~~~~~~~~l~~~G~~v~~g~  286 (364)
                      .....+|+|+-+..      -...+.++.+.|+++|+++....
T Consensus       110 ~~~~~fD~V~~~~~l~~~~~~~~~l~~~~~~Lk~gG~l~~~~~  152 (231)
T TIGR02752       110 FDDNSFDYVTIGFGLRNVPDYMQVLREMYRVVKPGGKVVCLET  152 (231)
T ss_pred             CCCCCccEEEEecccccCCCHHHHHHHHHHHcCcCeEEEEEEC
Confidence            01357899875322      13466788999999999987653

MenG is a generic term for a methyltransferase that catalyzes the last step in menaquinone biosynthesis; the exact enzymatic activity differs for different MenG because the menaquinone differ in their prenoid side chains in different species. Members of this MenG protein family are 2-heptaprenyl-1,4-naphthoquinone methyltransferase, and are found together in operons with the two subunits of the heptaprenyl diphosphate synthase in Bacillus subtilis and related species.

>PRK07775 short chain dehydrogenase; Provisional

Probab=94.21  E-value=0.65  Score=41.33  Aligned_cols=81  Identities=19%  Similarity=0.193  Sum_probs=46.9

Q ss_pred             CCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHH-H---HHcCCCe-EEecCC-CcccHHHHHHHHHHHcCCC
Q 017916          182 ETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSV-A---KELGADN-IVKVST-NLQDIAEEVEKIQKAMGTG  254 (364)
Q Consensus       182 g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~-~---~~lg~~~-~~~~~~-~~~~~~~~i~~~~~~~~~~  254 (364)
                      ..++||+|+ |.+|...++.+...|+ .|+++.++.++... .   +..+... .+..+- ..+++.+.++..... -++
T Consensus        10 ~~~vlVtGa~g~iG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-~~~   87 (274)
T PRK07775         10 RRPALVAGASSGIGAATAIELAAAGF-PVALGARRVEKCEELVDKIRADGGEAVAFPLDVTDPDSVKSFVAQAEEA-LGE   87 (274)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHh-cCC
Confidence            458999998 9999999998888899 56666565544322 2   2223321 112222 122333333333222 246


Q ss_pred             ccEEEECCCC
Q 017916          255 IDVSFDCAGF  264 (364)
Q Consensus       255 ~d~vid~~g~  264 (364)
                      +|++|.++|.
T Consensus        88 id~vi~~Ag~   97 (274)
T PRK07775         88 IEVLVSGAGD   97 (274)
T ss_pred             CCEEEECCCc
Confidence            8999998874

>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

Probab=94.20  E-value=0.62  Score=40.53  Aligned_cols=82  Identities=20%  Similarity=0.232  Sum_probs=47.7

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHH----HHHcCCC-eEEecCC-CcccHHHHHHHHHHHcCC
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSV----AKELGAD-NIVKVST-NLQDIAEEVEKIQKAMGT  253 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~----~~~lg~~-~~~~~~~-~~~~~~~~i~~~~~~~~~  253 (364)
                      .+.+|||+|+ |.+|...+..+...|+ .|++++++.++...    ++..+.. ..+..+- ...++.+.+..+... -.
T Consensus         5 ~~~~ilItGasg~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-~~   82 (251)
T PRK12826          5 EGRVALVTGAARGIGRAIAVRLAADGA-EVIVVDICGDDAAATAELVEAAGGKARARQVDVRDRAALKAAVAAGVED-FG   82 (251)
T ss_pred             CCCEEEEcCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHH-hC
Confidence            4578999998 9999999988888899 56777666544322    2222321 1222221 122333333333222 23


Q ss_pred             CccEEEECCCC
Q 017916          254 GIDVSFDCAGF  264 (364)
Q Consensus       254 ~~d~vid~~g~  264 (364)
                      ++|++|.+.|.
T Consensus        83 ~~d~vi~~ag~   93 (251)
T PRK12826         83 RLDILVANAGI   93 (251)
T ss_pred             CCCEEEECCCC
Confidence            68999998753

>PF08241 Methyltransf_11: Methyltransferase domain; InterPro: IPR013216 Methyl transfer from the ubiquitous S-adenosyl-L-methionine (SAM) to either nitrogen, oxygen or carbon atoms is frequently employed in diverse organisms ranging from bacteria to plants and mammals

Probab=94.18  E-value=0.4  Score=34.46  Aligned_cols=84  Identities=15%  Similarity=0.258  Sum_probs=53.4

Q ss_pred             EcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCe---EEecCCCcccHHHHHHHHHHHcCCCccEEEECCC-
Q 017916          188 MGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADN---IVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAG-  263 (364)
Q Consensus       188 ~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~---~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid~~g-  263 (364)
                      .|.| .|..+..+++. +...+++++.+.+..+.+++.....   +..-+...-.+          ..+.+|+|+.... 
T Consensus         3 iG~G-~G~~~~~l~~~-~~~~v~~~D~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~----------~~~sfD~v~~~~~~   70 (95)
T PF08241_consen    3 IGCG-TGRFAAALAKR-GGASVTGIDISEEMLEQARKRLKNEGVSFRQGDAEDLPF----------PDNSFDVVFSNSVL   70 (95)
T ss_dssp             ET-T-TSHHHHHHHHT-TTCEEEEEES-HHHHHHHHHHTTTSTEEEEESBTTSSSS-----------TT-EEEEEEESHG
T ss_pred             ecCc-CCHHHHHHHhc-cCCEEEEEeCCHHHHHHHHhcccccCchheeehHHhCcc----------ccccccccccccce
Confidence            3544 47888888888 5558999999999888887754332   22211111111          1357899986422 


Q ss_pred             -----CHHHHHHHHHhcccCCEEEE
Q 017916          264 -----FNKTMSTALSATRAGGKVCL  283 (364)
Q Consensus       264 -----~~~~~~~~~~~l~~~G~~v~  283 (364)
                           -...+.++.+.|+|+|+++.
T Consensus        71 ~~~~~~~~~l~e~~rvLk~gG~l~~   95 (95)
T PF08241_consen   71 HHLEDPEAALREIYRVLKPGGRLVI   95 (95)
T ss_dssp             GGSSHHHHHHHHHHHHEEEEEEEEE
T ss_pred             eeccCHHHHHHHHHHHcCcCeEEeC
Confidence                 13677899999999999874

The reaction is catalyzed by methyltransferases (Mtases) and modifies DNA, RNA, proteins and small molecules, such as catechol for regulatory purposes. The various aspects of the role of DNA methylation in prokaryotic restriction-modification systems and in a number of cellular processes in eukaryotes including gene regulation and differentiation is well documented. This entry represents a methyltransferase domain found in a large variety of SAM-dependent methyltransferases including, but not limited to: Arsenite methyltransferase (2.1.1.137 from EC) which converts arsenical compounds to their methylated forms [] Biotin synthesis protein bioC, which is involved in the early stages of biotin biosyntheis [] Arginine N-methyltransferase 1, an arginine-methylating enzyme which acts on residues present in a glycine and argine-rich domain and can methylate histones [] Hexaprenyldihydroxybenzoate methyltransferase (2.1.1.114 from EC), a mitochodrial enzyme involved in ubiquinone biosynthesis [] A probable cobalt-precorrin-6Y C(15)-methyltransferase thought to be involved in adenosylcobalamin biosynthesis [] Sterol 24-C-methyltransferase (2.1.1.41 from EC), shown to participate in ergosterol biosynthesis [] 3-demethylubiquinone-9 3-methyltransferase (2.1.1.64 from EC) involved in ubiquinone biosynthesis [] Structural studies show that this domain forms the Rossman-like alpha-beta fold typical of SAM-dependent methyltransferases [, , ]. ; GO: 0008168 methyltransferase activity, 0008152 metabolic process; PDB: 3CGG_B 3CCF_B 3BKW_B 2PXX_A 3I9F_A 2YQZ_B 2YR0_A 3BUS_A 3EGE_A 3G5L_B ....

>PRK11761 cysM cysteine synthase B; Provisional

Probab=94.16  E-value=2  Score=38.79  Aligned_cols=57  Identities=21%  Similarity=0.307  Sum_probs=44.6

Q ss_pred             HHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEec--ChhHHHHHHHcCCCeEE
Q 017916          175 RRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDV--DDYRLSVAKELGADNIV  231 (364)
Q Consensus       175 ~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~--~~~~~~~~~~lg~~~~~  231 (364)
                      +...+.+|++|+...+|..|++++..|+.+|.+.++++..  +++|.+.++.+|++-+.
T Consensus        56 ~~g~~~~g~~vv~aSsGN~g~alA~~a~~~G~~~~i~~p~~~~~~k~~~~~~~GA~v~~  114 (296)
T PRK11761         56 KRGEIKPGDTLIEATSGNTGIALAMIAAIKGYRMKLIMPENMSQERRAAMRAYGAELIL  114 (296)
T ss_pred             HcCCCCCCCEEEEeCCChHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHcCCEEEE
Confidence            4455678888777666999999999999999987777743  55788888999987543

>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=94.16  E-value=0.47  Score=41.11  Aligned_cols=82  Identities=21%  Similarity=0.201  Sum_probs=47.3

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHH----HcCCC-eEEecCC-CcccHHHHHHHHHHHcCC
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAK----ELGAD-NIVKVST-NLQDIAEEVEKIQKAMGT  253 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~----~lg~~-~~~~~~~-~~~~~~~~i~~~~~~~~~  253 (364)
                      +..+|||+|+ |.+|...++.+...|+++++.+.+..+..+.+.    ..+.. ..+..+- ..+++.+.+..+... -.
T Consensus         5 ~~~~vlItGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~-~~   83 (249)
T PRK12825          5 MGRVALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVEALGRRAQAVQADVTDKAALEAAVAAAVER-FG   83 (249)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCcCCHHHHHHHHHHHHHH-cC
Confidence            3468999998 999999999999999965444544444333221    22322 1222222 123333333333322 24


Q ss_pred             CccEEEECCC
Q 017916          254 GIDVSFDCAG  263 (364)
Q Consensus       254 ~~d~vid~~g  263 (364)
                      ++|.+|.++|
T Consensus        84 ~id~vi~~ag   93 (249)
T PRK12825         84 RIDILVNNAG   93 (249)
T ss_pred             CCCEEEECCc
Confidence            7999999887

>PRK08300 acetaldehyde dehydrogenase; Validated

Probab=94.15  E-value=0.59  Score=42.08  Aligned_cols=93  Identities=23%  Similarity=0.249  Sum_probs=57.1

Q ss_pred             CEEEEEcCCHHHHH-HHHHHHHCCCCEEEEEecChh--HHHHHHHcCCCeEEecCCCcccHHHHHHHHHHH-cCCCccEE
Q 017916          183 TNVLIMGAGPIGLV-TMLGARAFGAPRIVIVDVDDY--RLSVAKELGADNIVKVSTNLQDIAEEVEKIQKA-MGTGIDVS  258 (364)
Q Consensus       183 ~~VLI~Gag~~G~~-ai~la~~~g~~~vv~~~~~~~--~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~d~v  258 (364)
                      -+|.|.|.|.+|.. +..+.+.-+.+.+.+++.+.+  .....+++|.....      .++    +.+... .-.++|+|
T Consensus         5 lrVAIIGtG~IGt~hm~~l~~~~~velvAVvdid~es~gla~A~~~Gi~~~~------~~i----e~LL~~~~~~dIDiV   74 (302)
T PRK08300          5 LKVAIIGSGNIGTDLMIKILRSEHLEPGAMVGIDPESDGLARARRLGVATSA------EGI----DGLLAMPEFDDIDIV   74 (302)
T ss_pred             CeEEEEcCcHHHHHHHHHHhcCCCcEEEEEEeCChhhHHHHHHHHcCCCccc------CCH----HHHHhCcCCCCCCEE
Confidence            47899999999986 445555456655555555543  34567778865321      122    222220 01469999


Q ss_pred             EECCCCHHHHHHHHHhcccCCEEEEEc
Q 017916          259 FDCAGFNKTMSTALSATRAGGKVCLVG  285 (364)
Q Consensus       259 id~~g~~~~~~~~~~~l~~~G~~v~~g  285 (364)
                      |++++...+......++..|-+++...
T Consensus        75 f~AT~a~~H~e~a~~a~eaGk~VID~s  101 (302)
T PRK08300         75 FDATSAGAHVRHAAKLREAGIRAIDLT  101 (302)
T ss_pred             EECCCHHHHHHHHHHHHHcCCeEEECC
Confidence            999997777666666666665555543

>PRK11188 rrmJ 23S rRNA methyltransferase J; Provisional

Probab=94.14  E-value=0.83  Score=38.98  Aligned_cols=98  Identities=14%  Similarity=0.225  Sum_probs=56.9

Q ss_pred             CCCCCEEEEEcCCHHHHHHHHHHHHCCC-CEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcCCCccE
Q 017916          179 IGPETNVLIMGAGPIGLVTMLGARAFGA-PRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDV  257 (364)
Q Consensus       179 ~~~g~~VLI~Gag~~G~~ai~la~~~g~-~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~  257 (364)
                      ++++++||=.|+|. |..+..+++..+. ..|++++.++..    ..-++ .++.-+-......+.+....  ..+.+|+
T Consensus        49 ~~~~~~VLDlG~Gt-G~~t~~l~~~~~~~~~V~aVDi~~~~----~~~~v-~~i~~D~~~~~~~~~i~~~~--~~~~~D~  120 (209)
T PRK11188         49 FKPGMTVVDLGAAP-GGWSQYAVTQIGDKGRVIACDILPMD----PIVGV-DFLQGDFRDELVLKALLERV--GDSKVQV  120 (209)
T ss_pred             CCCCCEEEEEcccC-CHHHHHHHHHcCCCceEEEEeccccc----CCCCc-EEEecCCCChHHHHHHHHHh--CCCCCCE
Confidence            58899988888754 5556666666653 379999887621    01122 22221211112122222211  2457999


Q ss_pred             EEECC-----CC------------HHHHHHHHHhcccCCEEEEE
Q 017916          258 SFDCA-----GF------------NKTMSTALSATRAGGKVCLV  284 (364)
Q Consensus       258 vid~~-----g~------------~~~~~~~~~~l~~~G~~v~~  284 (364)
                      |+...     |.            ...++.+.+.|++||+++..
T Consensus       121 V~S~~~~~~~g~~~~d~~~~~~~~~~~L~~~~~~LkpGG~~vi~  164 (209)
T PRK11188        121 VMSDMAPNMSGTPAVDIPRAMYLVELALDMCRDVLAPGGSFVVK  164 (209)
T ss_pred             EecCCCCccCCChHHHHHHHHHHHHHHHHHHHHHcCCCCEEEEE
Confidence            99643     22            13567889999999999874

>PRK06124 gluconate 5-dehydrogenase; Provisional

Probab=94.14  E-value=0.79  Score=40.17  Aligned_cols=82  Identities=13%  Similarity=0.257  Sum_probs=50.0

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHH-H---HHcCCC-eEEecCC-CcccHHHHHHHHHHHcCC
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSV-A---KELGAD-NIVKVST-NLQDIAEEVEKIQKAMGT  253 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~-~---~~lg~~-~~~~~~~-~~~~~~~~i~~~~~~~~~  253 (364)
                      ++.++||+|+ +.+|...+..+...|+ .|+.++++.++.+. .   ++.+.. ..+..+- ..+++.+.++...... +
T Consensus        10 ~~k~ilItGas~~IG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-~   87 (256)
T PRK06124         10 AGQVALVTGSARGLGFEIARALAGAGA-HVLVNGRNAATLEAAVAALRAAGGAAEALAFDIADEEAVAAAFARIDAEH-G   87 (256)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhc-C
Confidence            5789999998 9999999998888899 56777776554332 2   233422 1222221 2233333333333322 4


Q ss_pred             CccEEEECCCC
Q 017916          254 GIDVSFDCAGF  264 (364)
Q Consensus       254 ~~d~vid~~g~  264 (364)
                      ++|.+|.++|.
T Consensus        88 ~id~vi~~ag~   98 (256)
T PRK06124         88 RLDILVNNVGA   98 (256)
T ss_pred             CCCEEEECCCC
Confidence            78999998874

>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=94.13  E-value=0.46  Score=41.20  Aligned_cols=82  Identities=21%  Similarity=0.361  Sum_probs=49.1

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHH-HH---cCCCe-EEecCCC-cccHHHHHHHHHHHcCC
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KE---LGADN-IVKVSTN-LQDIAEEVEKIQKAMGT  253 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~-~~---lg~~~-~~~~~~~-~~~~~~~i~~~~~~~~~  253 (364)
                      .+.++||+|+ |.+|...+..+...|+ .|+.+++++++.+.. .+   .+... .+..+-. ..++.+.++.+... -+
T Consensus         6 ~~~~vlVtG~sg~iG~~l~~~L~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~   83 (239)
T PRK07666          6 QGKNALITGAGRGIGRAVAIALAKEGV-NVGLLARTEENLKAVAEEVEAYGVKVVIATADVSDYEEVTAAIEQLKNE-LG   83 (239)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCeEEEEECCCCCHHHHHHHHHHHHHH-cC
Confidence            3578999998 9999999998888999 577777766554322 22   23211 2222221 22333333333221 24


Q ss_pred             CccEEEECCCC
Q 017916          254 GIDVSFDCAGF  264 (364)
Q Consensus       254 ~~d~vid~~g~  264 (364)
                      ++|++|.+.|.
T Consensus        84 ~id~vi~~ag~   94 (239)
T PRK07666         84 SIDILINNAGI   94 (239)
T ss_pred             CccEEEEcCcc
Confidence            79999998873

>TIGR01318 gltD_gamma_fam glutamate synthase small subunit family protein, proteobacterial

Probab=94.10  E-value=0.26  Score=47.76  Aligned_cols=78  Identities=22%  Similarity=0.314  Sum_probs=51.9

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecCh---------------------hHHHHHHHcCCCeEEecCCCcc
Q 017916          180 GPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDD---------------------YRLSVAKELGADNIVKVSTNLQ  238 (364)
Q Consensus       180 ~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~---------------------~~~~~~~~lg~~~~~~~~~~~~  238 (364)
                      ..+++|+|.|+|+.|+.++..++..|.+ |++.+..+                     ...+.++++|++...+..- ..
T Consensus       139 ~~~~~V~IIG~GpaGl~aA~~l~~~G~~-V~i~e~~~~~gG~l~~gip~~~~~~~~~~~~~~~~~~~Gv~~~~~~~v-~~  216 (467)
T TIGR01318       139 PTGKRVAVIGAGPAGLACADILARAGVQ-VVVFDRHPEIGGLLTFGIPSFKLDKAVLSRRREIFTAMGIEFHLNCEV-GR  216 (467)
T ss_pred             CCCCeEEEECCCHHHHHHHHHHHHcCCe-EEEEecCCCCCceeeecCccccCCHHHHHHHHHHHHHCCCEEECCCEe-CC
Confidence            3678999999999999999999999995 56665443                     2456677888764433111 01


Q ss_pred             cHHHHHHHHHHHcCCCccEEEECCCCH
Q 017916          239 DIAEEVEKIQKAMGTGIDVSFDCAGFN  265 (364)
Q Consensus       239 ~~~~~i~~~~~~~~~~~d~vid~~g~~  265 (364)
                      ++  .+....    .++|.+|.++|+.
T Consensus       217 ~~--~~~~~~----~~~D~vilAtGa~  237 (467)
T TIGR01318       217 DI--SLDDLL----EDYDAVFLGVGTY  237 (467)
T ss_pred             cc--CHHHHH----hcCCEEEEEeCCC
Confidence            11  112221    3699999999964

This model represents one of three built for the NADPH-dependent or NADH-dependent glutamate synthase (EC 1.4.1.13 and 1.4.1.14, respectively) small subunit and homologs. TIGR01317 describes the small subunit (or equivalent region from longer forms) in eukaryotes, Gram-positive bacteria, and some other lineages, both NADH and NADPH-dependent. TIGR01316 describes a protein of similar length, from Archaea and a number of bacterial lineages, that forms glutamate synthase homotetramers without a large subunit. This model describes both glutatate synthase small subunit and closely related paralogs of unknown function from a number of gamma and alpha subdivision Proteobacteria, including E. coli.

>PRK07074 short chain dehydrogenase; Provisional

Probab=94.10  E-value=0.74  Score=40.37  Aligned_cols=81  Identities=26%  Similarity=0.326  Sum_probs=48.7

Q ss_pred             CCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHH-HHHHcCCC--eEEecCCC-cccHHHHHHHHHHHcCCCcc
Q 017916          182 ETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLS-VAKELGAD--NIVKVSTN-LQDIAEEVEKIQKAMGTGID  256 (364)
Q Consensus       182 g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~-~~~~lg~~--~~~~~~~~-~~~~~~~i~~~~~~~~~~~d  256 (364)
                      +.++||+|+ |.+|...+..+...|+ .++.++++.++.+ +.+.+.-.  ..+..+-. .+++...+..+.... +++|
T Consensus         2 ~k~ilItGat~~iG~~la~~L~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~~d   79 (257)
T PRK07074          2 KRTALVTGAAGGIGQALARRFLAAGD-RVLALDIDAAALAAFADALGDARFVPVACDLTDAASLAAALANAAAER-GPVD   79 (257)
T ss_pred             CCEEEEECCcchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHc-CCCC
Confidence            468999998 9999999988888898 5677777666544 33333211  12222221 123333333333322 4699


Q ss_pred             EEEECCCC
Q 017916          257 VSFDCAGF  264 (364)
Q Consensus       257 ~vid~~g~  264 (364)
                      ++|.+.|.
T Consensus        80 ~vi~~ag~   87 (257)
T PRK07074         80 VLVANAGA   87 (257)
T ss_pred             EEEECCCC
Confidence            99999874

>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase

Probab=94.08  E-value=0.67  Score=40.46  Aligned_cols=79  Identities=25%  Similarity=0.373  Sum_probs=48.0

Q ss_pred             CEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHH----cCCC-eEEecCC-CcccHHHHHHHHHHHcCCCc
Q 017916          183 TNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKE----LGAD-NIVKVST-NLQDIAEEVEKIQKAMGTGI  255 (364)
Q Consensus       183 ~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~----lg~~-~~~~~~~-~~~~~~~~i~~~~~~~~~~~  255 (364)
                      .++||+|+ |.+|...+..+...|+ .|+.++++.++.+.+..    .+.. ..+..+- ..+++.+.++.+.+. -.++
T Consensus         2 ~~vlItGa~g~lG~~l~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~~~   79 (255)
T TIGR01963         2 KTALVTGAASGIGLAIALALAAAGA-NVVVNDLGEAGAEAAAKVATDAGGSVIYLVADVTKEDEIADMIAAAAAE-FGGL   79 (255)
T ss_pred             CEEEEcCCcchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHh-cCCC
Confidence            57999998 9999999998888899 57777776655443322    2222 1122221 123344434444332 2468


Q ss_pred             cEEEECCC
Q 017916          256 DVSFDCAG  263 (364)
Q Consensus       256 d~vid~~g  263 (364)
                      |++|.+.+
T Consensus        80 d~vi~~a~   87 (255)
T TIGR01963        80 DILVNNAG   87 (255)
T ss_pred             CEEEECCC
Confidence            99998776

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.

>TIGR03215 ac_ald_DH_ac acetaldehyde dehydrogenase (acetylating)

Probab=94.05  E-value=0.76  Score=41.15  Aligned_cols=89  Identities=24%  Similarity=0.292  Sum_probs=57.6

Q ss_pred             EEEEEcCCHHHHHH-HHHHHHCCCCEEEEEecChhH--HHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcCCCccEEEE
Q 017916          184 NVLIMGAGPIGLVT-MLGARAFGAPRIVIVDVDDYR--LSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  260 (364)
Q Consensus       184 ~VLI~Gag~~G~~a-i~la~~~g~~~vv~~~~~~~~--~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid  260 (364)
                      +|.|.|+|.+|... ..+.+..+.+.+.+++.++++  ....+++|......      ++.    .+..  ...+|+||+
T Consensus         3 rVAIIG~G~IG~~h~~~ll~~~~~elvaV~d~d~es~~la~A~~~Gi~~~~~------~~e----~ll~--~~dIDaV~i   70 (285)
T TIGR03215         3 KVAIIGSGNIGTDLMYKLLRSEHLEMVAMVGIDPESDGLARARELGVKTSAE------GVD----GLLA--NPDIDIVFD   70 (285)
T ss_pred             EEEEEeCcHHHHHHHHHHHhCCCcEEEEEEeCCcccHHHHHHHHCCCCEEEC------CHH----HHhc--CCCCCEEEE
Confidence            68889999999754 566665677555555555543  45677788654321      212    1221  247999999


Q ss_pred             CCCCHHHHHHHHHhcccCCEEEEE
Q 017916          261 CAGFNKTMSTALSATRAGGKVCLV  284 (364)
Q Consensus       261 ~~g~~~~~~~~~~~l~~~G~~v~~  284 (364)
                      +++...+......++..|-+++..
T Consensus        71 aTp~~~H~e~a~~al~aGk~VIde   94 (285)
T TIGR03215        71 ATSAKAHARHARLLAELGKIVIDL   94 (285)
T ss_pred             CCCcHHHHHHHHHHHHcCCEEEEC
Confidence            999888877777777765555443

Members of this protein family are acetaldehyde dehydrogenase (acetylating), EC 1.2.1.10. This enzyme oxidizes acetaldehyde, using NAD(+), and attaches coenzyme A (CoA), yielding acetyl-CoA. It occurs as a late step in the meta-cleavage pathways of a variety of compounds, including catechol, biphenyl, toluene, salicylate, etc.

>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase

Probab=94.03  E-value=1.2  Score=37.76  Aligned_cols=81  Identities=20%  Similarity=0.248  Sum_probs=53.5

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHH-HcCCCeEEecCCCcccHHHHHHHHHHHcCCCccEE
Q 017916          180 GPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAK-ELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVS  258 (364)
Q Consensus       180 ~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~-~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~v  258 (364)
                      -.|.+|+|.|.|.+|..+++.+...|+ .|++.+.+.++.+.+. .+++.. ++.    ++       +.   ...+|++
T Consensus        26 l~gk~v~I~G~G~vG~~~A~~L~~~G~-~Vvv~D~~~~~~~~~~~~~g~~~-v~~----~~-------l~---~~~~Dv~   89 (200)
T cd01075          26 LEGKTVAVQGLGKVGYKLAEHLLEEGA-KLIVADINEEAVARAAELFGATV-VAP----EE-------IY---SVDADVF   89 (200)
T ss_pred             CCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHcCCEE-Ecc----hh-------hc---cccCCEE
Confidence            357899999999999999999999999 5678888777665544 446432 221    11       11   2368999


Q ss_pred             EECCCCHHHHHHHHHhcc
Q 017916          259 FDCAGFNKTMSTALSATR  276 (364)
Q Consensus       259 id~~g~~~~~~~~~~~l~  276 (364)
                      +-|+.....-...++.|+
T Consensus        90 vp~A~~~~I~~~~~~~l~  107 (200)
T cd01075          90 APCALGGVINDDTIPQLK  107 (200)
T ss_pred             EecccccccCHHHHHHcC
Confidence            866543333344556664

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc

>PRK06484 short chain dehydrogenase; Validated

Probab=94.03  E-value=0.44  Score=46.75  Aligned_cols=82  Identities=28%  Similarity=0.377  Sum_probs=53.0

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHH-HHHHcCCCe-EEecCC-CcccHHHHHHHHHHHcCCCcc
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLS-VAKELGADN-IVKVST-NLQDIAEEVEKIQKAMGTGID  256 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~-~~~~lg~~~-~~~~~~-~~~~~~~~i~~~~~~~~~~~d  256 (364)
                      .+.++||+|+ +++|.+.++.+...|+ .|+.+.++.++.+ +.++++... .+..|- ..+++.+.++.+.+. .+++|
T Consensus         4 ~~k~~lITGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~g~iD   81 (520)
T PRK06484          4 QSRVVLVTGAAGGIGRAACQRFARAGD-QVVVADRNVERARERADSLGPDHHALAMDVSDEAQIREGFEQLHRE-FGRID   81 (520)
T ss_pred             CCeEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCceeEEEeccCCHHHHHHHHHHHHHH-hCCCC
Confidence            5789999998 9999999999999999 5677767666654 445565432 122221 223344444443332 24799


Q ss_pred             EEEECCCC
Q 017916          257 VSFDCAGF  264 (364)
Q Consensus       257 ~vid~~g~  264 (364)
                      ++|++.|.
T Consensus        82 ~li~nag~   89 (520)
T PRK06484         82 VLVNNAGV   89 (520)
T ss_pred             EEEECCCc
Confidence            99998873

>PTZ00146 fibrillarin; Provisional

Probab=94.01  E-value=0.81  Score=40.95  Aligned_cols=103  Identities=15%  Similarity=0.145  Sum_probs=61.7

Q ss_pred             HHHHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCC-CEEEEEecChhHH-HHHHH----cCCCeEEecCCCcccHHHHHHH
Q 017916          173 ACRRANIGPETNVLIMGAGPIGLVTMLGARAFGA-PRIVIVDVDDYRL-SVAKE----LGADNIVKVSTNLQDIAEEVEK  246 (364)
Q Consensus       173 ~l~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~-~~vv~~~~~~~~~-~~~~~----lg~~~~~~~~~~~~~~~~~i~~  246 (364)
                      .++...++++++||=.|+|. |..+..++...|. ..|++++.+++-. ++++.    -++.. +.-+..  . ....+.
T Consensus       124 g~~~l~IkpG~~VLDLGaG~-G~~t~~lAdiVG~~G~VyAVD~s~r~~~dLl~~ak~r~NI~~-I~~Da~--~-p~~y~~  198 (293)
T PTZ00146        124 GVANIPIKPGSKVLYLGAAS-GTTVSHVSDLVGPEGVVYAVEFSHRSGRDLTNMAKKRPNIVP-IIEDAR--Y-PQKYRM  198 (293)
T ss_pred             CcceeccCCCCEEEEeCCcC-CHHHHHHHHHhCCCCEEEEEECcHHHHHHHHHHhhhcCCCEE-EECCcc--C-hhhhhc
Confidence            35667889999999888755 6677888888763 3799998875432 22222    12222 211111  1 111111


Q ss_pred             HHHHcCCCccEEEECCCCHH----HHHHHHHhcccCCEEEEE
Q 017916          247 IQKAMGTGIDVSFDCAGFNK----TMSTALSATRAGGKVCLV  284 (364)
Q Consensus       247 ~~~~~~~~~d~vid~~g~~~----~~~~~~~~l~~~G~~v~~  284 (364)
                      .    ...+|+||-.+..++    ...++.+.|+++|+++..
T Consensus       199 ~----~~~vDvV~~Dva~pdq~~il~~na~r~LKpGG~~vI~  236 (293)
T PTZ00146        199 L----VPMVDVIFADVAQPDQARIVALNAQYFLKNGGHFIIS  236 (293)
T ss_pred             c----cCCCCEEEEeCCCcchHHHHHHHHHHhccCCCEEEEE
Confidence            1    236899986554443    234567799999999873

>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated

Probab=93.98  E-value=0.52  Score=44.57  Aligned_cols=76  Identities=13%  Similarity=0.251  Sum_probs=45.6

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHH-HHHcCCC-eEEecCCCcccHHHHHHHHHHHcCCCccE
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSV-AKELGAD-NIVKVSTNLQDIAEEVEKIQKAMGTGIDV  257 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~-~~~lg~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~d~  257 (364)
                      .+.+++|+|+ |.+|.+.++.+...|+ .|+++++++++.+. ....+.. ..+..+-.  + .+.+.+.    -+++|+
T Consensus       177 ~gK~VLITGASgGIG~aLA~~La~~G~-~Vi~l~r~~~~l~~~~~~~~~~v~~v~~Dvs--d-~~~v~~~----l~~IDi  248 (406)
T PRK07424        177 KGKTVAVTGASGTLGQALLKELHQQGA-KVVALTSNSDKITLEINGEDLPVKTLHWQVG--Q-EAALAEL----LEKVDI  248 (406)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhhcCCCeEEEEeeCC--C-HHHHHHH----hCCCCE
Confidence            4789999998 9999999998888999 56666666554432 2111111 12222211  1 1223322    147999


Q ss_pred             EEECCCC
Q 017916          258 SFDCAGF  264 (364)
Q Consensus       258 vid~~g~  264 (364)
                      +|+++|.
T Consensus       249 LInnAGi  255 (406)
T PRK07424        249 LIINHGI  255 (406)
T ss_pred             EEECCCc
Confidence            9998763

>PRK13243 glyoxylate reductase; Reviewed

Probab=93.97  E-value=0.87  Score=41.93  Aligned_cols=90  Identities=21%  Similarity=0.261  Sum_probs=60.4

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcCCCccEEEE
Q 017916          181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  260 (364)
Q Consensus       181 ~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid  260 (364)
                      .|.+|.|.|.|.+|...++.++.+|+ .|++.+++.... .....+..    +    .++.    ++.    ...|+|+-
T Consensus       149 ~gktvgIiG~G~IG~~vA~~l~~~G~-~V~~~d~~~~~~-~~~~~~~~----~----~~l~----ell----~~aDiV~l  210 (333)
T PRK13243        149 YGKTIGIIGFGRIGQAVARRAKGFGM-RILYYSRTRKPE-AEKELGAE----Y----RPLE----ELL----RESDFVSL  210 (333)
T ss_pred             CCCEEEEECcCHHHHHHHHHHHHCCC-EEEEECCCCChh-hHHHcCCE----e----cCHH----HHH----hhCCEEEE
Confidence            57899999999999999999999999 577887665432 23334432    1    1222    222    24689888


Q ss_pred             CCCCHH----HH-HHHHHhcccCCEEEEEcCCC
Q 017916          261 CAGFNK----TM-STALSATRAGGKVCLVGMGH  288 (364)
Q Consensus       261 ~~g~~~----~~-~~~~~~l~~~G~~v~~g~~~  288 (364)
                      ++...+    .+ ...+..|+++..++.++...
T Consensus       211 ~lP~t~~T~~~i~~~~~~~mk~ga~lIN~aRg~  243 (333)
T PRK13243        211 HVPLTKETYHMINEERLKLMKPTAILVNTARGK  243 (333)
T ss_pred             eCCCChHHhhccCHHHHhcCCCCeEEEECcCch
Confidence            765322    11 25678899999888886543

>PRK12935 acetoacetyl-CoA reductase; Provisional

Probab=93.95  E-value=0.67  Score=40.32  Aligned_cols=83  Identities=17%  Similarity=0.222  Sum_probs=47.4

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHH-HHH---HcCCC-eEEecCCC-cccHHHHHHHHHHHcCC
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLS-VAK---ELGAD-NIVKVSTN-LQDIAEEVEKIQKAMGT  253 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~-~~~---~lg~~-~~~~~~~~-~~~~~~~i~~~~~~~~~  253 (364)
                      .+.++||+|+ |.+|...+..+...|+++++...+++++.+ ...   ..+.. ..+..+-. .+++.+.++..... -+
T Consensus         5 ~~~~~lItG~s~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~   83 (247)
T PRK12935          5 NGKVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLVNELGKEGHDVYAVQADVSKVEDANRLVEEAVNH-FG   83 (247)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEcCCcHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHH-cC
Confidence            3679999998 999999999888899964433333333322 222   22322 12222222 22333333333322 24


Q ss_pred             CccEEEECCCC
Q 017916          254 GIDVSFDCAGF  264 (364)
Q Consensus       254 ~~d~vid~~g~  264 (364)
                      .+|++|.++|.
T Consensus        84 ~id~vi~~ag~   94 (247)
T PRK12935         84 KVDILVNNAGI   94 (247)
T ss_pred             CCCEEEECCCC
Confidence            68999998874

>PRK05597 molybdopterin biosynthesis protein MoeB; Validated

Probab=93.94  E-value=0.79  Score=42.61  Aligned_cols=35  Identities=31%  Similarity=0.484  Sum_probs=30.6

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecC
Q 017916          181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVD  215 (364)
Q Consensus       181 ~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~  215 (364)
                      .+.+|||.|+|++|..++..+...|...+..++.+
T Consensus        27 ~~~~VlivG~GGlGs~~a~~La~~Gvg~i~lvD~D   61 (355)
T PRK05597         27 FDAKVAVIGAGGLGSPALLYLAGAGVGHITIIDDD   61 (355)
T ss_pred             hCCeEEEECCCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence            34799999999999999999999999988888753

>PRK06947 glucose-1-dehydrogenase; Provisional

Probab=93.94  E-value=0.62  Score=40.60  Aligned_cols=80  Identities=26%  Similarity=0.212  Sum_probs=45.6

Q ss_pred             CEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHH----HHHcCCC-eEEecCC-CcccHHHHHHHHHHHcCCCc
Q 017916          183 TNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSV----AKELGAD-NIVKVST-NLQDIAEEVEKIQKAMGTGI  255 (364)
Q Consensus       183 ~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~----~~~lg~~-~~~~~~~-~~~~~~~~i~~~~~~~~~~~  255 (364)
                      .++||+|+ |.+|...++.....|+++++...++.++.+.    ++..+.. ..+..+- ...++.+.++.+... -+++
T Consensus         3 k~ilItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-~~~i   81 (248)
T PRK06947          3 KVVLITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAVRAAGGRACVVAGDVANEADVIAMFDAVQSA-FGRL   81 (248)
T ss_pred             cEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEeccCCHHHHHHHHHHHHHh-cCCC
Confidence            47999998 9999999999988899644444444443322    2222322 1222222 122333333333322 2479


Q ss_pred             cEEEECCC
Q 017916          256 DVSFDCAG  263 (364)
Q Consensus       256 d~vid~~g  263 (364)
                      |++|.++|
T Consensus        82 d~li~~ag   89 (248)
T PRK06947         82 DALVNNAG   89 (248)
T ss_pred             CEEEECCc
Confidence            99999887

>PRK07577 short chain dehydrogenase; Provisional

Probab=93.92  E-value=0.41  Score=41.26  Aligned_cols=74  Identities=18%  Similarity=0.331  Sum_probs=45.9

Q ss_pred             CCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCC-CcccHHHHHHHHHHHcCCCccEEE
Q 017916          182 ETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVST-NLQDIAEEVEKIQKAMGTGIDVSF  259 (364)
Q Consensus       182 g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~-~~~~~~~~i~~~~~~~~~~~d~vi  259 (364)
                      +.++||+|+ |.+|...++.+...|+ .|+.+.++.++     .+.. .++..+- ..+++.+.+..+..  ..++|++|
T Consensus         3 ~k~vlItG~s~~iG~~ia~~l~~~G~-~v~~~~r~~~~-----~~~~-~~~~~D~~~~~~~~~~~~~~~~--~~~~d~vi   73 (234)
T PRK07577          3 SRTVLVTGATKGIGLALSLRLANLGH-QVIGIARSAID-----DFPG-ELFACDLADIEQTAATLAQINE--IHPVDAIV   73 (234)
T ss_pred             CCEEEEECCCCcHHHHHHHHHHHCCC-EEEEEeCCccc-----ccCc-eEEEeeCCCHHHHHHHHHHHHH--hCCCcEEE
Confidence            578999998 9999999999988998 56666665443     1111 1222221 12333344444433  23689999


Q ss_pred             ECCCC
Q 017916          260 DCAGF  264 (364)
Q Consensus       260 d~~g~  264 (364)
                      .+.|.
T Consensus        74 ~~ag~   78 (234)
T PRK07577         74 NNVGI   78 (234)
T ss_pred             ECCCC
Confidence            98873

>PRK08936 glucose-1-dehydrogenase; Provisional

Probab=93.92  E-value=0.66  Score=40.86  Aligned_cols=82  Identities=23%  Similarity=0.211  Sum_probs=46.7

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEec-ChhHHH-H---HHHcCCCe-EEecCC-CcccHHHHHHHHHHHcC
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDV-DDYRLS-V---AKELGADN-IVKVST-NLQDIAEEVEKIQKAMG  252 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~-~~~~~~-~---~~~lg~~~-~~~~~~-~~~~~~~~i~~~~~~~~  252 (364)
                      ++.++||+|+ +.+|...++.+...|+.+ +.+.+ +.++.+ .   ++..+... .+..+- ..++..+.+..+... .
T Consensus         6 ~~k~~lItGa~~gIG~~ia~~l~~~G~~v-vi~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~-~   83 (261)
T PRK08936          6 EGKVVVITGGSTGLGRAMAVRFGKEKAKV-VINYRSDEEEANDVAEEIKKAGGEAIAVKGDVTVESDVVNLIQTAVKE-F   83 (261)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEE-EEEeCCCHHHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHH-c
Confidence            5789999998 999999999999999954 44434 322222 2   22233321 222221 122333333333222 2


Q ss_pred             CCccEEEECCCC
Q 017916          253 TGIDVSFDCAGF  264 (364)
Q Consensus       253 ~~~d~vid~~g~  264 (364)
                      +++|+++.++|.
T Consensus        84 g~id~lv~~ag~   95 (261)
T PRK08936         84 GTLDVMINNAGI   95 (261)
T ss_pred             CCCCEEEECCCC
Confidence            479999998874

>PRK06101 short chain dehydrogenase; Provisional

Probab=93.90  E-value=0.61  Score=40.54  Aligned_cols=41  Identities=27%  Similarity=0.272  Sum_probs=32.0

Q ss_pred             CEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHH
Q 017916          183 TNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKE  224 (364)
Q Consensus       183 ~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~  224 (364)
                      .++||+|+ |++|...+..+...|+ .|+.+++++++.+.+.+
T Consensus         2 ~~vlItGas~giG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~   43 (240)
T PRK06101          2 TAVLITGATSGIGKQLALDYAKQGW-QVIACGRNQSVLDELHT   43 (240)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHH
Confidence            46899998 9999988888888899 57777777777655544

>PRK12749 quinate/shikimate dehydrogenase; Reviewed

Probab=93.88  E-value=0.53  Score=42.35  Aligned_cols=36  Identities=17%  Similarity=0.229  Sum_probs=29.9

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecCh
Q 017916          181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDD  216 (364)
Q Consensus       181 ~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~  216 (364)
                      .+.++||.|+|+.+.+++..+...|++.+.++.++.
T Consensus       123 ~~k~vlvlGaGGaarAi~~~l~~~g~~~i~i~nRt~  158 (288)
T PRK12749        123 KGKTMVLLGAGGASTAIGAQGAIEGLKEIKLFNRRD  158 (288)
T ss_pred             CCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCc
Confidence            567999999988888877777778998888888874

>PRK12550 shikimate 5-dehydrogenase; Reviewed

Probab=93.88  E-value=0.32  Score=43.32  Aligned_cols=54  Identities=17%  Similarity=0.167  Sum_probs=41.2

Q ss_pred             HHHHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHH-HHcC
Q 017916          173 ACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KELG  226 (364)
Q Consensus       173 ~l~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~-~~lg  226 (364)
                      +++......+.+++|.|+|+.+.+++.-++..|++.+.++.++.+|.+.+ +.++
T Consensus       113 ~L~~~~~~~~~~vlilGaGGaarAi~~aL~~~g~~~i~i~nR~~~~a~~la~~~~  167 (272)
T PRK12550        113 LLASYQVPPDLVVALRGSGGMAKAVAAALRDAGFTDGTIVARNEKTGKALAELYG  167 (272)
T ss_pred             HHHhcCCCCCCeEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhC
Confidence            34443445567999999999999999999999998888988888776544 4443

>PRK09135 pteridine reductase; Provisional

Probab=93.86  E-value=0.77  Score=39.88  Aligned_cols=81  Identities=19%  Similarity=0.117  Sum_probs=45.8

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecC-hhHHHHH-H---HcCC--CeEEecCCC-cccHHHHHHHHHHHc
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVD-DYRLSVA-K---ELGA--DNIVKVSTN-LQDIAEEVEKIQKAM  251 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~-~~~~~~~-~---~lg~--~~~~~~~~~-~~~~~~~i~~~~~~~  251 (364)
                      .+.+|||+|+ |.+|..++..+...|+ .|++++++ .++.+.+ +   ..+.  ...+..+-. .+++.+.++.+... 
T Consensus         5 ~~~~vlItGa~g~iG~~l~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-   82 (249)
T PRK09135          5 SAKVALITGGARRIGAAIARTLHAAGY-RVAIHYHRSAAEADALAAELNALRPGSAAALQADLLDPDALPELVAACVAA-   82 (249)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhhcCCceEEEEcCCCCHHHHHHHHHHHHHH-
Confidence            4578999998 9999999998888899 46666554 3332222 1   2211  112222211 12223333332221 


Q ss_pred             CCCccEEEECCC
Q 017916          252 GTGIDVSFDCAG  263 (364)
Q Consensus       252 ~~~~d~vid~~g  263 (364)
                      -.++|++|.++|
T Consensus        83 ~~~~d~vi~~ag   94 (249)
T PRK09135         83 FGRLDALVNNAS   94 (249)
T ss_pred             cCCCCEEEECCC
Confidence            246899999987

>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=93.86  E-value=0.79  Score=39.71  Aligned_cols=83  Identities=19%  Similarity=0.255  Sum_probs=45.9

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHH-HH---HHHcCCCe-EEecCCC-cccHHHHHHHHHHHcCC
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRL-SV---AKELGADN-IVKVSTN-LQDIAEEVEKIQKAMGT  253 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~-~~---~~~lg~~~-~~~~~~~-~~~~~~~i~~~~~~~~~  253 (364)
                      .+.++||+|+ |.+|...+..+...|+++++...+.+.+. ..   ++..+... .+..+-. .+++.+.++.+.+. -.
T Consensus         4 ~~~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-~~   82 (248)
T PRK05557          4 EGKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGALGGKALAVQGDVSDAESVERAVDEAKAE-FG   82 (248)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHH-cC
Confidence            3568999998 99999999999989996444443333222 22   22223221 2211221 12233333333221 24


Q ss_pred             CccEEEECCCC
Q 017916          254 GIDVSFDCAGF  264 (364)
Q Consensus       254 ~~d~vid~~g~  264 (364)
                      ++|.+|.++|.
T Consensus        83 ~id~vi~~ag~   93 (248)
T PRK05557         83 GVDILVNNAGI   93 (248)
T ss_pred             CCCEEEECCCc
Confidence            68999998873

>PRK05650 short chain dehydrogenase; Provisional

Probab=93.85  E-value=0.77  Score=40.69  Aligned_cols=79  Identities=24%  Similarity=0.305  Sum_probs=46.4

Q ss_pred             EEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHH-HH---HcCCCe-EEecCCC-cccHHHHHHHHHHHcCCCcc
Q 017916          184 NVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSV-AK---ELGADN-IVKVSTN-LQDIAEEVEKIQKAMGTGID  256 (364)
Q Consensus       184 ~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~-~~---~lg~~~-~~~~~~~-~~~~~~~i~~~~~~~~~~~d  256 (364)
                      +|||+|+ |.+|...+..+...|++ |+.++++.++.+. ..   ..+... .+..+-. .+++.+.++.+.. ..+++|
T Consensus         2 ~vlVtGasggIG~~la~~l~~~g~~-V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~i~~-~~~~id   79 (270)
T PRK05650          2 RVMITGAASGLGRAIALRWAREGWR-LALADVNEEGGEETLKLLREAGGDGFYQRCDVRDYSQLTALAQACEE-KWGGID   79 (270)
T ss_pred             EEEEecCCChHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHH-HcCCCC
Confidence            6899998 99999999888888994 6666666655332 22   223222 2222221 1223333333222 235799


Q ss_pred             EEEECCCC
Q 017916          257 VSFDCAGF  264 (364)
Q Consensus       257 ~vid~~g~  264 (364)
                      ++|.++|.
T Consensus        80 ~lI~~ag~   87 (270)
T PRK05650         80 VIVNNAGV   87 (270)
T ss_pred             EEEECCCC
Confidence            99999874

>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional

Probab=93.85  E-value=0.56  Score=40.88  Aligned_cols=84  Identities=20%  Similarity=0.317  Sum_probs=50.9

Q ss_pred             CCCCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHH----HHHcCCCe--EE--ecCC-CcccHHHHHHHHH
Q 017916          179 IGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSV----AKELGADN--IV--KVST-NLQDIAEEVEKIQ  248 (364)
Q Consensus       179 ~~~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~----~~~lg~~~--~~--~~~~-~~~~~~~~i~~~~  248 (364)
                      ..++.+|||+|+ |.+|...++.+...|+ .|++++++.++.+.    +++.+...  ++  +.+. ...++.+..+.+.
T Consensus         9 ~~~~k~vlItG~~g~iG~~la~~l~~~G~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~   87 (247)
T PRK08945          9 LLKDRIILVTGAGDGIGREAALTYARHGA-TVILLGRTEEKLEAVYDEIEAAGGPQPAIIPLDLLTATPQNYQQLADTIE   87 (247)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCC-cEEEEeCCHHHHHHHHHHHHhcCCCCceEEEecccCCCHHHHHHHHHHHH
Confidence            457889999998 9999999988888899 56677776654322    22333221  22  2221 2233333334343


Q ss_pred             HHcCCCccEEEECCCC
Q 017916          249 KAMGTGIDVSFDCAGF  264 (364)
Q Consensus       249 ~~~~~~~d~vid~~g~  264 (364)
                      +. .+++|.+|.++|.
T Consensus        88 ~~-~~~id~vi~~Ag~  102 (247)
T PRK08945         88 EQ-FGRLDGVLHNAGL  102 (247)
T ss_pred             HH-hCCCCEEEECCcc
Confidence            32 2479999988763

>PRK08328 hypothetical protein; Provisional

Probab=93.84  E-value=0.85  Score=39.62  Aligned_cols=34  Identities=26%  Similarity=0.432  Sum_probs=29.9

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEec
Q 017916          181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDV  214 (364)
Q Consensus       181 ~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~  214 (364)
                      .+.+|+|.|+|++|..++..+...|...+..+|.
T Consensus        26 ~~~~VlIiG~GGlGs~ia~~La~~Gvg~i~lvD~   59 (231)
T PRK08328         26 KKAKVAVVGVGGLGSPVAYYLAAAGVGRILLIDE   59 (231)
T ss_pred             hCCcEEEECCCHHHHHHHHHHHHcCCCEEEEEcC
Confidence            3478999999999999999999999998888863

>PRK00121 trmB tRNA (guanine-N(7)-)-methyltransferase; Reviewed

Probab=93.83  E-value=0.5  Score=40.09  Aligned_cols=98  Identities=15%  Similarity=0.132  Sum_probs=62.9

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHH----cCCCeEEecCCCcccHHHHHHHHHHHcCCCcc
Q 017916          181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKE----LGADNIVKVSTNLQDIAEEVEKIQKAMGTGID  256 (364)
Q Consensus       181 ~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d  256 (364)
                      ++.+||-.|+|. |..+..+++......+++++.+++..+.+++    .+...+....   .+..+.+...  .....+|
T Consensus        40 ~~~~VLDiGcGt-G~~~~~la~~~p~~~v~gVD~s~~~i~~a~~~~~~~~~~~v~~~~---~d~~~~l~~~--~~~~~~D  113 (202)
T PRK00121         40 DAPIHLEIGFGK-GEFLVEMAKANPDINFIGIEVHEPGVGKALKKIEEEGLTNLRLLC---GDAVEVLLDM--FPDGSLD  113 (202)
T ss_pred             CCCeEEEEccCC-CHHHHHHHHHCCCccEEEEEechHHHHHHHHHHHHcCCCCEEEEe---cCHHHHHHHH--cCccccc
Confidence            678888888765 6777788887654579999999988777654    2333222111   2221222111  1135688


Q ss_pred             EEEECCC--------------CHHHHHHHHHhcccCCEEEEE
Q 017916          257 VSFDCAG--------------FNKTMSTALSATRAGGKVCLV  284 (364)
Q Consensus       257 ~vid~~g--------------~~~~~~~~~~~l~~~G~~v~~  284 (364)
                      .++-...              ....++.+.+.|+|+|.++..
T Consensus       114 ~V~~~~~~p~~~~~~~~~~~~~~~~l~~i~~~LkpgG~l~i~  155 (202)
T PRK00121        114 RIYLNFPDPWPKKRHHKRRLVQPEFLALYARKLKPGGEIHFA  155 (202)
T ss_pred             eEEEECCCCCCCccccccccCCHHHHHHHHHHcCCCCEEEEE
Confidence            8875322              245788999999999999876

>TIGR01289 LPOR light-dependent protochlorophyllide reductase

Probab=93.83  E-value=0.68  Score=42.23  Aligned_cols=81  Identities=23%  Similarity=0.357  Sum_probs=48.5

Q ss_pred             CCEEEEEcC-CHHHHHHHHHHHHCC-CCEEEEEecChhHHH-HHHHcCCC----eEEecCC-CcccHHHHHHHHHHHcCC
Q 017916          182 ETNVLIMGA-GPIGLVTMLGARAFG-APRIVIVDVDDYRLS-VAKELGAD----NIVKVST-NLQDIAEEVEKIQKAMGT  253 (364)
Q Consensus       182 g~~VLI~Ga-g~~G~~ai~la~~~g-~~~vv~~~~~~~~~~-~~~~lg~~----~~~~~~~-~~~~~~~~i~~~~~~~~~  253 (364)
                      +.++||+|+ +++|.+.++.+...| + .|+.+.++.++.+ ..++++..    ..+..+- ...+..+.+.++... .+
T Consensus         3 ~k~vlITGas~GIG~aia~~L~~~G~~-~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~-~~   80 (314)
T TIGR01289         3 KPTVIITGASSGLGLYAAKALAATGEW-HVIMACRDFLKAEQAAKSLGMPKDSYTIMHLDLGSLDSVRQFVQQFRES-GR   80 (314)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHcCCC-EEEEEeCCHHHHHHHHHHhcCCCCeEEEEEcCCCCHHHHHHHHHHHHHh-CC
Confidence            568999998 999999888888889 7 5666666665543 33444321    1222221 122333333333222 35


Q ss_pred             CccEEEECCCC
Q 017916          254 GIDVSFDCAGF  264 (364)
Q Consensus       254 ~~d~vid~~g~  264 (364)
                      ++|++|+++|.
T Consensus        81 ~iD~lI~nAG~   91 (314)
T TIGR01289        81 PLDALVCNAAV   91 (314)
T ss_pred             CCCEEEECCCc
Confidence            79999998773

This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.

>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase

Probab=93.82  E-value=0.47  Score=41.10  Aligned_cols=80  Identities=23%  Similarity=0.253  Sum_probs=45.3

Q ss_pred             CEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEec-ChhHH-HHHHHc---CCC-eEEecCC-CcccHHHHHHHHHHHcCCC
Q 017916          183 TNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDV-DDYRL-SVAKEL---GAD-NIVKVST-NLQDIAEEVEKIQKAMGTG  254 (364)
Q Consensus       183 ~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~-~~~~~-~~~~~l---g~~-~~~~~~~-~~~~~~~~i~~~~~~~~~~  254 (364)
                      .++||+|+ |.+|...++.+...|++ ++++.+ +.++. +...++   +.. ..+..+- ...++.+.+..+.+. .++
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~-v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~~   78 (242)
T TIGR01829         1 RIALVTGGMGGIGTAICQRLAKDGYR-VAANCGPNEERAEAWLQEQGALGFDFRVVEGDVSSFESCKAAVAKVEAE-LGP   78 (242)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCE-EEEEeCCCHHHHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHH-cCC
Confidence            36899998 99999999999889995 555544 33332 222222   211 1222222 123333334333332 346


Q ss_pred             ccEEEECCCC
Q 017916          255 IDVSFDCAGF  264 (364)
Q Consensus       255 ~d~vid~~g~  264 (364)
                      +|++|.+.|.
T Consensus        79 id~vi~~ag~   88 (242)
T TIGR01829        79 IDVLVNNAGI   88 (242)
T ss_pred             CcEEEECCCC
Confidence            9999999873

(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.

>PRK15116 sulfur acceptor protein CsdL; Provisional

Probab=93.80  E-value=1.5  Score=38.91  Aligned_cols=35  Identities=20%  Similarity=0.424  Sum_probs=30.3

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecC
Q 017916          181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVD  215 (364)
Q Consensus       181 ~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~  215 (364)
                      .+.+|+|.|.|++|..++..+...|...+..++.+
T Consensus        29 ~~s~VlVvG~GGVGs~vae~Lar~GVg~itLiD~D   63 (268)
T PRK15116         29 ADAHICVVGIGGVGSWAAEALARTGIGAITLIDMD   63 (268)
T ss_pred             cCCCEEEECcCHHHHHHHHHHHHcCCCEEEEEeCC
Confidence            45789999999999999999999998888888743

>PRK12809 putative oxidoreductase Fe-S binding subunit; Reviewed

Probab=93.80  E-value=0.32  Score=49.07  Aligned_cols=77  Identities=22%  Similarity=0.274  Sum_probs=52.2

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChh---------------------HHHHHHHcCCCeEEecCCCccc
Q 017916          181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDY---------------------RLSVAKELGADNIVKVSTNLQD  239 (364)
Q Consensus       181 ~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~---------------------~~~~~~~lg~~~~~~~~~~~~~  239 (364)
                      .+.+|+|.|+|..|+.++..++..|++ |.+.+..+.                     +.++++++|++...+..- ..+
T Consensus       309 ~~kkVaIIG~GpaGl~aA~~L~~~G~~-Vtv~e~~~~~GG~l~~gip~~~l~~~~~~~~~~~~~~~Gv~~~~~~~v-~~~  386 (639)
T PRK12809        309 RSEKVAVIGAGPAGLGCADILARAGVQ-VDVFDRHPEIGGMLTFGIPPFKLDKTVLSQRREIFTAMGIDFHLNCEI-GRD  386 (639)
T ss_pred             CCCEEEEECcCHHHHHHHHHHHHcCCc-EEEEeCCCCCCCeeeccCCcccCCHHHHHHHHHHHHHCCeEEEcCCcc-CCc
Confidence            489999999999999999999999995 666665442                     456677788765443211 111


Q ss_pred             HHHHHHHHHHHcCCCccEEEECCCCH
Q 017916          240 IAEEVEKIQKAMGTGIDVSFDCAGFN  265 (364)
Q Consensus       240 ~~~~i~~~~~~~~~~~d~vid~~g~~  265 (364)
                      .  .++.+    ..++|.+|.++|+.
T Consensus       387 ~--~~~~l----~~~~DaV~latGa~  406 (639)
T PRK12809        387 I--TFSDL----TSEYDAVFIGVGTY  406 (639)
T ss_pred             C--CHHHH----HhcCCEEEEeCCCC
Confidence            1  12222    24689999999863

>PRK12744 short chain dehydrogenase; Provisional

Probab=93.79  E-value=0.67  Score=40.72  Aligned_cols=83  Identities=18%  Similarity=0.171  Sum_probs=46.0

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecC---hhHH-HHH---HHcCCCe-EEecCCC-cccHHHHHHHHHHH
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVD---DYRL-SVA---KELGADN-IVKVSTN-LQDIAEEVEKIQKA  250 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~---~~~~-~~~---~~lg~~~-~~~~~~~-~~~~~~~i~~~~~~  250 (364)
                      .+.++||+|+ |.+|.+.++.+...|+++++....+   .++. +..   +..+... .+..|-. .++..+.+......
T Consensus         7 ~~k~vlItGa~~gIG~~~a~~l~~~G~~vv~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   86 (257)
T PRK12744          7 KGKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVKAAGAKAVAFQADLTTAAAVEKLFDDAKAA   86 (257)
T ss_pred             CCcEEEEECCCchHHHHHHHHHHHCCCcEEEEecCCccchHHHHHHHHHHHHhCCcEEEEecCcCCHHHHHHHHHHHHHh
Confidence            4678999998 9999999999988999644443222   1111 222   2234321 2222221 22333333333222


Q ss_pred             cCCCccEEEECCCC
Q 017916          251 MGTGIDVSFDCAGF  264 (364)
Q Consensus       251 ~~~~~d~vid~~g~  264 (364)
                       .+++|++|.++|.
T Consensus        87 -~~~id~li~~ag~   99 (257)
T PRK12744         87 -FGRPDIAINTVGK   99 (257)
T ss_pred             -hCCCCEEEECCcc
Confidence             2479999998874

>PRK07340 ornithine cyclodeaminase; Validated

Probab=93.79  E-value=0.88  Score=41.32  Aligned_cols=100  Identities=16%  Similarity=0.140  Sum_probs=64.9

Q ss_pred             HHHcCCCCCCEEEEEcCCHHHHHHHHHHH-HCCCCEEEEEecChhHHH-HHHHcCCC--eEEecCCCcccHHHHHHHHHH
Q 017916          174 CRRANIGPETNVLIMGAGPIGLVTMLGAR-AFGAPRIVIVDVDDYRLS-VAKELGAD--NIVKVSTNLQDIAEEVEKIQK  249 (364)
Q Consensus       174 l~~~~~~~g~~VLI~Gag~~G~~ai~la~-~~g~~~vv~~~~~~~~~~-~~~~lg~~--~~~~~~~~~~~~~~~i~~~~~  249 (364)
                      .+...-....+++|.|+|..|.+.+..+. ..+.+.+.+.+++.++.+ ++.++...  .+. +    .+..+.+     
T Consensus       117 ~~~La~~~~~~v~IiGaG~qa~~~~~al~~~~~~~~v~v~~r~~~~a~~~a~~~~~~~~~~~-~----~~~~~av-----  186 (304)
T PRK07340        117 ARTLAPAPPGDLLLIGTGVQARAHLEAFAAGLPVRRVWVRGRTAASAAAFCAHARALGPTAE-P----LDGEAIP-----  186 (304)
T ss_pred             HHHhCCCCCCEEEEECCcHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHhcCCeeE-E----CCHHHHh-----
Confidence            34433356679999999999988888776 478888899988887755 44445321  111 1    1222221     


Q ss_pred             HcCCCccEEEECCCCHHHHHHHHHhcccCCEEEEEcCCC
Q 017916          250 AMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGH  288 (364)
Q Consensus       250 ~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~  288 (364)
                         .+.|+|+.|+.+.+.+-..  .++||-++..+|...
T Consensus       187 ---~~aDiVitaT~s~~Pl~~~--~~~~g~hi~~iGs~~  220 (304)
T PRK07340        187 ---EAVDLVVTATTSRTPVYPE--AARAGRLVVAVGAFT  220 (304)
T ss_pred             ---hcCCEEEEccCCCCceeCc--cCCCCCEEEecCCCC
Confidence               3789999998875533333  378888888888543

>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]

Probab=93.78  E-value=0.79  Score=38.14  Aligned_cols=80  Identities=25%  Similarity=0.444  Sum_probs=52.9

Q ss_pred             CEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecCh-hHHHHHHHcCC--Ce-EEecC-CCcccHHHHHHHHHHHcCCCcc
Q 017916          183 TNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDD-YRLSVAKELGA--DN-IVKVS-TNLQDIAEEVEKIQKAMGTGID  256 (364)
Q Consensus       183 ~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~-~~~~~~~~lg~--~~-~~~~~-~~~~~~~~~i~~~~~~~~~~~d  256 (364)
                      ...+|+|+ +++|.+..|.....|+ ++++.+.+. +..+.++.|+.  ++ .+..+ +...+....+++..+..+ .++
T Consensus        15 k~~~vtGg~sGIGrAia~~la~~Ga-rv~v~dl~~~~A~ata~~L~g~~~h~aF~~DVS~a~~v~~~l~e~~k~~g-~ps   92 (256)
T KOG1200|consen   15 KVAAVTGGSSGIGRAIAQLLAKKGA-RVAVADLDSAAAEATAGDLGGYGDHSAFSCDVSKAHDVQNTLEEMEKSLG-TPS   92 (256)
T ss_pred             ceeEEecCCchHHHHHHHHHHhcCc-EEEEeecchhhHHHHHhhcCCCCccceeeeccCcHHHHHHHHHHHHHhcC-CCc
Confidence            34577787 8999999999999999 566666544 44566777875  22 11111 122344444555555445 899


Q ss_pred             EEEECCCC
Q 017916          257 VSFDCAGF  264 (364)
Q Consensus       257 ~vid~~g~  264 (364)
                      ++++|+|.
T Consensus        93 vlVncAGI  100 (256)
T KOG1200|consen   93 VLVNCAGI  100 (256)
T ss_pred             EEEEcCcc
Confidence            99999985

>TIGR00507 aroE shikimate 5-dehydrogenase

Probab=93.77  E-value=1  Score=40.14  Aligned_cols=114  Identities=16%  Similarity=0.175  Sum_probs=64.9

Q ss_pred             CCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHH-HHHHcCCCe-EEecCCCcccHHHHHHHHHHHcCCCcc
Q 017916          179 IGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLS-VAKELGADN-IVKVSTNLQDIAEEVEKIQKAMGTGID  256 (364)
Q Consensus       179 ~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~-~~~~lg~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~d  256 (364)
                      ...+.+++|.|+|++|.+++..+...|+ .+.++.++.++.+ +.+.+.... ....     ++.+    .   ....+|
T Consensus       114 ~~~~k~vliiGaGg~g~aia~~L~~~g~-~v~v~~R~~~~~~~la~~~~~~~~~~~~-----~~~~----~---~~~~~D  180 (270)
T TIGR00507       114 LRPNQRVLIIGAGGAARAVALPLLKADC-NVIIANRTVSKAEELAERFQRYGEIQAF-----SMDE----L---PLHRVD  180 (270)
T ss_pred             CccCCEEEEEcCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhhcCceEEe-----chhh----h---cccCcc
Confidence            3457899999999999999888888898 6777777776644 344443210 1111     0110    1   124689


Q ss_pred             EEEECCCCHH--HH---HHHHHhcccCCEEEEEcCCCCCccccchhhhhcCcEEE
Q 017916          257 VSFDCAGFNK--TM---STALSATRAGGKVCLVGMGHHEMTVPLTPAAVREVDVV  306 (364)
Q Consensus       257 ~vid~~g~~~--~~---~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~  306 (364)
                      ++|+|++.+.  ..   ......++++..++++....... ..+..+-.+++.+.
T Consensus       181 ivInatp~gm~~~~~~~~~~~~~l~~~~~v~D~~y~p~~T-~ll~~A~~~G~~~v  234 (270)
T TIGR00507       181 LIINATSAGMSGNIDEPPVPAEKLKEGMVVYDMVYNPGET-PFLAEAKSLGTKTI  234 (270)
T ss_pred             EEEECCCCCCCCCCCCCCCCHHHcCCCCEEEEeccCCCCC-HHHHHHHHCCCeee
Confidence            9999988531  01   11234577777777765433322 23333444555443

This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.

>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]

Probab=93.75  E-value=1.3  Score=34.35  Aligned_cols=92  Identities=21%  Similarity=0.208  Sum_probs=52.6

Q ss_pred             EEEEEcC-CHHHHHHHHHHHH-CCCCEEEEEecChh---HHHHHHHcCCCe--EEecCCCcccHHHHHHHHHHHcCCCcc
Q 017916          184 NVLIMGA-GPIGLVTMLGARA-FGAPRIVIVDVDDY---RLSVAKELGADN--IVKVSTNLQDIAEEVEKIQKAMGTGID  256 (364)
Q Consensus       184 ~VLI~Ga-g~~G~~ai~la~~-~g~~~vv~~~~~~~---~~~~~~~lg~~~--~~~~~~~~~~~~~~i~~~~~~~~~~~d  256 (364)
                      +|.|+|+ |-+|.+.++.+.. -+.+.+.++++.+.   ..+.-.-.|...  +..+    .+    +.+..    ..+|
T Consensus         2 rV~i~G~~GrMG~~i~~~i~~~~~~~lv~~v~~~~~~~~g~d~g~~~~~~~~~~~v~----~~----l~~~~----~~~D   69 (124)
T PF01113_consen    2 RVGIVGASGRMGRAIAEAILESPGFELVGAVDRKPSAKVGKDVGELAGIGPLGVPVT----DD----LEELL----EEAD   69 (124)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSTTEEEEEEEETTTSTTTTSBCHHHCTSST-SSBEB----S-----HHHHT----TH-S
T ss_pred             EEEEECCCCHHHHHHHHHHHhcCCcEEEEEEecCCcccccchhhhhhCcCCcccccc----hh----HHHhc----ccCC
Confidence            6899999 9999999999987 67765666665541   122222222211  1111    12    33332    2389


Q ss_pred             EEEECCCCHHHHHHHHHhcccCCEEEEEcCCC
Q 017916          257 VSFDCAGFNKTMSTALSATRAGGKVCLVGMGH  288 (364)
Q Consensus       257 ~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~  288 (364)
                      ++||++. ++.....++.+...|.-+..|.++
T Consensus        70 VvIDfT~-p~~~~~~~~~~~~~g~~~ViGTTG  100 (124)
T PF01113_consen   70 VVIDFTN-PDAVYDNLEYALKHGVPLVIGTTG  100 (124)
T ss_dssp             EEEEES--HHHHHHHHHHHHHHT-EEEEE-SS
T ss_pred             EEEEcCC-hHHhHHHHHHHHhCCCCEEEECCC
Confidence            9999886 666666666555567666666544

In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....

>PRK12548 shikimate 5-dehydrogenase; Provisional

Probab=93.74  E-value=0.5  Score=42.56  Aligned_cols=37  Identities=22%  Similarity=0.322  Sum_probs=31.1

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecCh
Q 017916          180 GPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDD  216 (364)
Q Consensus       180 ~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~  216 (364)
                      -.+.+++|+|+|++|.+++..+...|++.|.++.++.
T Consensus       124 ~~~k~vlI~GAGGagrAia~~La~~G~~~V~I~~R~~  160 (289)
T PRK12548        124 VKGKKLTVIGAGGAATAIQVQCALDGAKEITIFNIKD  160 (289)
T ss_pred             cCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCc
Confidence            3567899999999999988888889998788887764

>KOG3201 consensus Uncharacterized conserved protein [Function unknown]

Probab=93.70  E-value=0.3  Score=39.17  Aligned_cols=154  Identities=16%  Similarity=0.173  Sum_probs=88.1

Q ss_pred             HHHHHHHHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCe-EEecCCC---cccHHHHH
Q 017916          169 VGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADN-IVKVSTN---LQDIAEEV  244 (364)
Q Consensus       169 ~a~~~l~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~-~~~~~~~---~~~~~~~i  244 (364)
                      .||..|+..+.-.|.+||-.|+|-+|++-+.+|...-.+.|..++.+.+..+.+++.-..+ ...+.+-   .-.+....
T Consensus        17 la~~~l~~~n~~rg~~ilelgggft~laglmia~~a~~~~v~ltdgne~svrnv~ki~~~n~~s~~tsc~vlrw~~~~aq   96 (201)
T KOG3201|consen   17 LAWTILRDPNKIRGRRILELGGGFTGLAGLMIACKAPDSSVWLTDGNEESVRNVEKIRNSNMASSLTSCCVLRWLIWGAQ   96 (201)
T ss_pred             HHHHHHhchhHHhHHHHHHhcCchhhhhhhheeeecCCceEEEecCCHHHHHHHHHHHhcccccccceehhhHHHHhhhH
Confidence            3666676655556788999999999999999999888778999999888777766532111 0001000   00111111


Q ss_pred             HHHHHHcCCCccEEE--ECCCCH----HHHHHHHHhcccCCEEEEEcCCCCC-ccccchhhhhcCcEEEeeccCC-CcHH
Q 017916          245 EKIQKAMGTGIDVSF--DCAGFN----KTMSTALSATRAGGKVCLVGMGHHE-MTVPLTPAAVREVDVVGVFRYK-NTWP  316 (364)
Q Consensus       245 ~~~~~~~~~~~d~vi--d~~g~~----~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~  316 (364)
                      .   ...+..||+|+  ||.--.    +.+...+.+|+|.|+.+.++...+. ...+.......++++.-.-.+. ..++
T Consensus        97 s---q~eq~tFDiIlaADClFfdE~h~sLvdtIk~lL~p~g~Al~fsPRRg~sL~kF~de~~~~gf~v~l~enyde~iwq  173 (201)
T KOG3201|consen   97 S---QQEQHTFDIILAADCLFFDEHHESLVDTIKSLLRPSGRALLFSPRRGQSLQKFLDEVGTVGFTVCLEENYDEAIWQ  173 (201)
T ss_pred             H---HHhhCcccEEEeccchhHHHHHHHHHHHHHHHhCcccceeEecCcccchHHHHHHHHHhceeEEEecccHhHHHHH
Confidence            1   11245799987  565533    3555677789999998777643322 2333333444444444333332 2333


Q ss_pred             HHHHHHHcC
Q 017916          317 LCLELLRSG  325 (364)
Q Consensus       317 ~~~~~l~~g  325 (364)
                      .-.++..++
T Consensus       174 rh~~Lkk~~  182 (201)
T KOG3201|consen  174 RHGRLKKGD  182 (201)
T ss_pred             HHHHHhcCC
Confidence            334443333

>PRK05562 precorrin-2 dehydrogenase; Provisional

Probab=93.61  E-value=3.1  Score=35.76  Aligned_cols=92  Identities=14%  Similarity=0.053  Sum_probs=53.5

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecCh-hHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcCCCccEEE
Q 017916          181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDD-YRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF  259 (364)
Q Consensus       181 ~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~-~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vi  259 (364)
                      ++.+|||.|+|.++.-=+..+...|++ |.+++..- .....+.+-+-...+.     .++..  ..     -.++++||
T Consensus        24 ~~~~VLVVGGG~VA~RK~~~Ll~~gA~-VtVVap~i~~el~~l~~~~~i~~~~-----r~~~~--~d-----l~g~~LVi   90 (223)
T PRK05562         24 NKIKVLIIGGGKAAFIKGKTFLKKGCY-VYILSKKFSKEFLDLKKYGNLKLIK-----GNYDK--EF-----IKDKHLIV   90 (223)
T ss_pred             CCCEEEEECCCHHHHHHHHHHHhCCCE-EEEEcCCCCHHHHHHHhCCCEEEEe-----CCCCh--HH-----hCCCcEEE
Confidence            577999999999998878888888994 55553322 1221122223222221     11111  11     14789999


Q ss_pred             ECCCCHHHHHHHHHhcccCCEEEEEc
Q 017916          260 DCAGFNKTMSTALSATRAGGKVCLVG  285 (364)
Q Consensus       260 d~~g~~~~~~~~~~~l~~~G~~v~~g  285 (364)
                      -|++.++.=.......+..+.++...
T Consensus        91 aATdD~~vN~~I~~~a~~~~~lvn~v  116 (223)
T PRK05562         91 IATDDEKLNNKIRKHCDRLYKLYIDC  116 (223)
T ss_pred             ECCCCHHHHHHHHHHHHHcCCeEEEc
Confidence            99997655445555555557666554

>PRK07370 enoyl-(acyl carrier protein) reductase; Validated

Probab=93.59  E-value=0.52  Score=41.59  Aligned_cols=104  Identities=19%  Similarity=0.246  Sum_probs=58.5

Q ss_pred             CCCEEEEEcC---CHHHHHHHHHHHHCCCCEEEEEecCh---hHHHHHHHc----CCCeEEecCC-CcccHHHHHHHHHH
Q 017916          181 PETNVLIMGA---GPIGLVTMLGARAFGAPRIVIVDVDD---YRLSVAKEL----GADNIVKVST-NLQDIAEEVEKIQK  249 (364)
Q Consensus       181 ~g~~VLI~Ga---g~~G~~ai~la~~~g~~~vv~~~~~~---~~~~~~~~l----g~~~~~~~~~-~~~~~~~~i~~~~~  249 (364)
                      .|.++||+|+   +++|.+.+..+...|++ |+.+..+.   ...+.++++    +....+..|- ..++..+.++...+
T Consensus         5 ~~k~~lItGas~~~GIG~aia~~la~~G~~-v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~   83 (258)
T PRK07370          5 TGKKALVTGIANNRSIAWGIAQQLHAAGAE-LGITYLPDEKGRFEKKVRELTEPLNPSLFLPCDVQDDAQIEETFETIKQ   83 (258)
T ss_pred             CCcEEEEeCCCCCCchHHHHHHHHHHCCCE-EEEEecCcccchHHHHHHHHHhccCcceEeecCcCCHHHHHHHHHHHHH
Confidence            4678999986   48999999999889995 44442221   112222222    2111222221 22333434444433


Q ss_pred             HcCCCccEEEECCCCH--------------H---------------HHHHHHHhcccCCEEEEEcC
Q 017916          250 AMGTGIDVSFDCAGFN--------------K---------------TMSTALSATRAGGKVCLVGM  286 (364)
Q Consensus       250 ~~~~~~d~vid~~g~~--------------~---------------~~~~~~~~l~~~G~~v~~g~  286 (364)
                      . -+++|++|+++|..              +               ..+.++..|+.+|+++.++.
T Consensus        84 ~-~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~~g~Iv~isS  148 (258)
T PRK07370         84 K-WGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSEGGSIVTLTY  148 (258)
T ss_pred             H-cCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhhCCeEEEEec
Confidence            2 24799999988731              0               12345666767788887753

>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA

Probab=93.55  E-value=1.3  Score=38.25  Aligned_cols=32  Identities=31%  Similarity=0.449  Sum_probs=28.8

Q ss_pred             CCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEe
Q 017916          182 ETNVLIMGAGPIGLVTMLGARAFGAPRIVIVD  213 (364)
Q Consensus       182 g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~  213 (364)
                      ..+|+|.|+|++|..++..+...|...+..+|
T Consensus        21 ~~~VlivG~GglGs~va~~La~~Gvg~i~lvD   52 (228)
T cd00757          21 NARVLVVGAGGLGSPAAEYLAAAGVGKLGLVD   52 (228)
T ss_pred             CCcEEEECCCHHHHHHHHHHHHcCCCEEEEEc
Confidence            57999999999999999999999998888875

Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).

>PRK05855 short chain dehydrogenase; Validated

Probab=93.52  E-value=0.72  Score=45.76  Aligned_cols=82  Identities=23%  Similarity=0.264  Sum_probs=50.2

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHH----HHcCCC-eEEecCCC-cccHHHHHHHHHHHcCC
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA----KELGAD-NIVKVSTN-LQDIAEEVEKIQKAMGT  253 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~----~~lg~~-~~~~~~~~-~~~~~~~i~~~~~~~~~  253 (364)
                      .+.++||+|+ |++|.+.++.+...|++ |+.++++.++.+.+    +..|.. ..+..|-. .++..+.+..+.+ ..+
T Consensus       314 ~~~~~lv~G~s~giG~~~a~~l~~~G~~-v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~-~~g  391 (582)
T PRK05855        314 SGKLVVVTGAGSGIGRETALAFAREGAE-VVASDIDEAAAERTAELIRAAGAVAHAYRVDVSDADAMEAFAEWVRA-EHG  391 (582)
T ss_pred             CCCEEEEECCcCHHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHH-hcC
Confidence            4578999998 99999999988889995 67777776554432    223332 12222221 2233333333322 234


Q ss_pred             CccEEEECCCC
Q 017916          254 GIDVSFDCAGF  264 (364)
Q Consensus       254 ~~d~vid~~g~  264 (364)
                      ++|++|+++|.
T Consensus       392 ~id~lv~~Ag~  402 (582)
T PRK05855        392 VPDIVVNNAGI  402 (582)
T ss_pred             CCcEEEECCcc
Confidence            79999999874

>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=93.51  E-value=0.76  Score=41.72  Aligned_cols=81  Identities=25%  Similarity=0.338  Sum_probs=46.3

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecC-hhHH-HH---HHHcCCCe-EEecCCCc-ccHHHHHHHHHHHcC
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVD-DYRL-SV---AKELGADN-IVKVSTNL-QDIAEEVEKIQKAMG  252 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~-~~~~-~~---~~~lg~~~-~~~~~~~~-~~~~~~i~~~~~~~~  252 (364)
                      .+.++||+|+ +.+|.+.++.+...|++ |+.++.. .++. +.   ++..|... .+..+-.+ ++..+.+.....  -
T Consensus        11 ~~k~~lVTGas~gIG~~ia~~L~~~Ga~-Vv~~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~d~~~~~~~~~~~~~--~   87 (306)
T PRK07792         11 SGKVAVVTGAAAGLGRAEALGLARLGAT-VVVNDVASALDASDVLDEIRAAGAKAVAVAGDISQRATADELVATAVG--L   87 (306)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCE-EEEecCCchhHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHH--h
Confidence            4678999998 99999999888889995 5555443 2222 22   22334322 12222111 222222222222  3


Q ss_pred             CCccEEEECCCC
Q 017916          253 TGIDVSFDCAGF  264 (364)
Q Consensus       253 ~~~d~vid~~g~  264 (364)
                      +++|++|+++|.
T Consensus        88 g~iD~li~nAG~   99 (306)
T PRK07792         88 GGLDIVVNNAGI   99 (306)
T ss_pred             CCCCEEEECCCC
Confidence            579999998874

>TIGR00477 tehB tellurite resistance protein TehB

Probab=93.49  E-value=0.56  Score=39.54  Aligned_cols=94  Identities=16%  Similarity=0.196  Sum_probs=57.1

Q ss_pred             cCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHc----CCC-eEEecCCCcccHHHHHHHHHHHc
Q 017916          177 ANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKEL----GAD-NIVKVSTNLQDIAEEVEKIQKAM  251 (364)
Q Consensus       177 ~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~l----g~~-~~~~~~~~~~~~~~~i~~~~~~~  251 (364)
                      ....++.+||-.|+|. |..+..+++ .|. .|++++.++.-.+.+++.    +.. ....     .+..    .+.  .
T Consensus        26 ~~~~~~~~vLDiGcG~-G~~a~~la~-~g~-~V~~iD~s~~~l~~a~~~~~~~~~~v~~~~-----~d~~----~~~--~   91 (195)
T TIGR00477        26 VKTVAPCKTLDLGCGQ-GRNSLYLSL-AGY-DVRAWDHNPASIASVLDMKARENLPLRTDA-----YDIN----AAA--L   91 (195)
T ss_pred             hccCCCCcEEEeCCCC-CHHHHHHHH-CCC-eEEEEECCHHHHHHHHHHHHHhCCCceeEe-----ccch----hcc--c
Confidence            4445567899888754 666666766 477 789999998776655432    322 1111     1111    010  1


Q ss_pred             CCCccEEEECC-----CC---HHHHHHHHHhcccCCEEEEE
Q 017916          252 GTGIDVSFDCA-----GF---NKTMSTALSATRAGGKVCLV  284 (364)
Q Consensus       252 ~~~~d~vid~~-----g~---~~~~~~~~~~l~~~G~~v~~  284 (364)
                      ...+|+|+...     ..   ...+..+.+.|+|+|.++.+
T Consensus        92 ~~~fD~I~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lli~  132 (195)
T TIGR00477        92 NEDYDFIFSTVVFMFLQAGRVPEIIANMQAHTRPGGYNLIV  132 (195)
T ss_pred             cCCCCEEEEecccccCCHHHHHHHHHHHHHHhCCCcEEEEE
Confidence            34699997642     11   35677888999999996554

Part of a tellurite-reducing operon tehA and tehB

>TIGR01138 cysM cysteine synthase B

Probab=93.45  E-value=3.4  Score=37.27  Aligned_cols=56  Identities=20%  Similarity=0.271  Sum_probs=43.5

Q ss_pred             HHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEec--ChhHHHHHHHcCCCeE
Q 017916          175 RRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDV--DDYRLSVAKELGADNI  230 (364)
Q Consensus       175 ~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~--~~~~~~~~~~lg~~~~  230 (364)
                      +...+.++++|+...+|..|.+.+..|+.+|.+.++++..  ++.|.+.++.+|++-.
T Consensus        52 ~~g~~~~g~~vv~aSsGN~g~alA~~a~~~G~~~~i~~p~~~~~~k~~~~~~~GA~v~  109 (290)
T TIGR01138        52 KRGEIKPGDVLIEATSGNTGIALAMIAALKGYRMKLLMPDNMSQERKAAMRAYGAELI  109 (290)
T ss_pred             HcCCCCCCCEEEEECCChHHHHHHHHHHHcCCeEEEEECCCCCHHHHHHHHHcCCEEE
Confidence            4455677887766566999999999999999987666643  4578888899998744

Alternate name: O-acetylserine (thiol)-lyase

>PRK13656 trans-2-enoyl-CoA reductase; Provisional

Probab=93.40  E-value=0.97  Score=42.14  Aligned_cols=82  Identities=18%  Similarity=0.144  Sum_probs=47.5

Q ss_pred             CCCEEEEEcC-CHHHHH--HHHHHHHCCCCEEEEEecCh---h-H------------HHHHHHcCCCe-EEecCCC-ccc
Q 017916          181 PETNVLIMGA-GPIGLV--TMLGARAFGAPRIVIVDVDD---Y-R------------LSVAKELGADN-IVKVSTN-LQD  239 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~--ai~la~~~g~~~vv~~~~~~---~-~------------~~~~~~lg~~~-~~~~~~~-~~~  239 (364)
                      -+.++||+|+ +++|.+  .++.+ ..|+. ++++....   + +            .+.++++|... .+..+-. .++
T Consensus        40 ggK~aLVTGaSsGIGlA~~IA~al-~~GA~-Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~G~~a~~i~~DVss~E~  117 (398)
T PRK13656         40 GPKKVLVIGASSGYGLASRIAAAF-GAGAD-TLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAAGLYAKSINGDAFSDEI  117 (398)
T ss_pred             CCCEEEEECCCchHhHHHHHHHHH-HcCCe-EEEEecCcchhhhcccccccchHHHHHHHHHhcCCceEEEEcCCCCHHH
Confidence            4578899997 899998  44455 78995 44554211   1 1            23445566532 2333322 233


Q ss_pred             HHHHHHHHHHHcCCCccEEEECCCCH
Q 017916          240 IAEEVEKIQKAMGTGIDVSFDCAGFN  265 (364)
Q Consensus       240 ~~~~i~~~~~~~~~~~d~vid~~g~~  265 (364)
                      ..+.+..+.+.. +++|+++++++.+
T Consensus       118 v~~lie~I~e~~-G~IDiLVnSaA~~  142 (398)
T PRK13656        118 KQKVIELIKQDL-GQVDLVVYSLASP  142 (398)
T ss_pred             HHHHHHHHHHhc-CCCCEEEECCccC
Confidence            444444444433 4799999998865

>PLN03013 cysteine synthase

Probab=93.37  E-value=2.7  Score=39.90  Aligned_cols=56  Identities=23%  Similarity=0.306  Sum_probs=43.5

Q ss_pred             HHcCCCCCCEEEEEc-CCHHHHHHHHHHHHCCCCEEEEEe--cChhHHHHHHHcCCCeE
Q 017916          175 RRANIGPETNVLIMG-AGPIGLVTMLGARAFGAPRIVIVD--VDDYRLSVAKELGADNI  230 (364)
Q Consensus       175 ~~~~~~~g~~VLI~G-ag~~G~~ai~la~~~g~~~vv~~~--~~~~~~~~~~~lg~~~~  230 (364)
                      +...+++|.+.+|.. +|..|++.+..|+.+|.+.++++.  .+++|.+.++.+|++-+
T Consensus       167 ~~G~l~pG~~~VVeaSSGN~G~ALA~~a~~~G~~~~VvvP~~~s~~K~~~ira~GAeVi  225 (429)
T PLN03013        167 QKGFISPGKSVLVEPTSGNTGIGLAFIAASRGYRLILTMPASMSMERRVLLKAFGAELV  225 (429)
T ss_pred             HcCCcCCCCcEEEEECCcHHHHHHHHHHHHcCCCEEEEECCCCcHHHHHHHHHcCCEEE
Confidence            456678886666664 599999999999999998766653  36678889999998654

>PRK12769 putative oxidoreductase Fe-S binding subunit; Reviewed

Probab=93.34  E-value=0.34  Score=49.12  Aligned_cols=35  Identities=29%  Similarity=0.434  Sum_probs=29.9

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecC
Q 017916          180 GPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVD  215 (364)
Q Consensus       180 ~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~  215 (364)
                      ..+.+|+|.|+|+.|++++..++..|++ |++++..
T Consensus       325 ~~~~~VaIIGaGpAGLsaA~~L~~~G~~-V~V~E~~  359 (654)
T PRK12769        325 KSDKRVAIIGAGPAGLACADVLARNGVA-VTVYDRH  359 (654)
T ss_pred             cCCCEEEEECCCHHHHHHHHHHHHCCCe-EEEEecC
Confidence            3578999999999999999999999995 6666654

>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional

Probab=93.33  E-value=0.56  Score=41.42  Aligned_cols=77  Identities=21%  Similarity=0.223  Sum_probs=46.2

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCC-CcccHHHHHHHHHHHcCCCccEE
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVST-NLQDIAEEVEKIQKAMGTGIDVS  258 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~-~~~~~~~~i~~~~~~~~~~~d~v  258 (364)
                      .+.++||+|+ |.+|.+.++.+...|+ .|+.++.+.++...   .... .+..+- ..+++.+.+..+... -+++|++
T Consensus         8 ~~k~vlItG~s~gIG~~la~~l~~~G~-~v~~~~~~~~~~~~---~~~~-~~~~D~~~~~~~~~~~~~~~~~-~g~id~l   81 (266)
T PRK06171          8 QGKIIIVTGGSSGIGLAIVKELLANGA-NVVNADIHGGDGQH---ENYQ-FVPTDVSSAEEVNHTVAEIIEK-FGRIDGL   81 (266)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCcccccc---CceE-EEEccCCCHHHHHHHHHHHHHH-cCCCCEE
Confidence            4678999998 9999999999999999 46666555443211   1111 111121 123333333333322 2479999


Q ss_pred             EECCC
Q 017916          259 FDCAG  263 (364)
Q Consensus       259 id~~g  263 (364)
                      |.++|
T Consensus        82 i~~Ag   86 (266)
T PRK06171         82 VNNAG   86 (266)
T ss_pred             EECCc
Confidence            99887

>PRK06123 short chain dehydrogenase; Provisional

Probab=93.30  E-value=0.99  Score=39.24  Aligned_cols=82  Identities=20%  Similarity=0.201  Sum_probs=46.4

Q ss_pred             CCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHH----HHHcCCCe-EEecCC-CcccHHHHHHHHHHHcCCC
Q 017916          182 ETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSV----AKELGADN-IVKVST-NLQDIAEEVEKIQKAMGTG  254 (364)
Q Consensus       182 g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~----~~~lg~~~-~~~~~~-~~~~~~~~i~~~~~~~~~~  254 (364)
                      +.++||+|+ |.+|...++.....|+.+++...+++++...    ++..+... .+..+- ..+++.+.+..+.+. .++
T Consensus         2 ~~~~lVtG~~~~iG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-~~~   80 (248)
T PRK06123          2 RKVMIITGASRGIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAIRRQGGEALAVAADVADEADVLRLFEAVDRE-LGR   80 (248)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCeEEEecCCCHHHHHHHHHHHHhCCCcEEEEEeccCCHHHHHHHHHHHHHH-hCC
Confidence            457999998 9999999988888898544333334333222    23334321 222221 123334444433322 247


Q ss_pred             ccEEEECCCC
Q 017916          255 IDVSFDCAGF  264 (364)
Q Consensus       255 ~d~vid~~g~  264 (364)
                      +|++|.++|.
T Consensus        81 id~li~~ag~   90 (248)
T PRK06123         81 LDALVNNAGI   90 (248)
T ss_pred             CCEEEECCCC
Confidence            9999998874

>COG1052 LdhA Lactate dehydrogenase and related dehydrogenases [Energy production and conversion / Coenzyme metabolism / General function prediction only]

Probab=93.28  E-value=2.1  Score=39.20  Aligned_cols=90  Identities=23%  Similarity=0.327  Sum_probs=60.5

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcCCCccEEEE
Q 017916          181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  260 (364)
Q Consensus       181 ~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid  260 (364)
                      .|.++.|.|.|.+|++.++.++.+|. .|+..+++.. .+..+.+++.++        ++.+.+        ...|++.-
T Consensus       145 ~gktvGIiG~GrIG~avA~r~~~Fgm-~v~y~~~~~~-~~~~~~~~~~y~--------~l~ell--------~~sDii~l  206 (324)
T COG1052         145 RGKTLGIIGLGRIGQAVARRLKGFGM-KVLYYDRSPN-PEAEKELGARYV--------DLDELL--------AESDIISL  206 (324)
T ss_pred             CCCEEEEECCCHHHHHHHHHHhcCCC-EEEEECCCCC-hHHHhhcCceec--------cHHHHH--------HhCCEEEE
Confidence            48999999999999999999999999 5777766654 333344554432        122222        24677654


Q ss_pred             -CCCCHHHHH----HHHHhcccCCEEEEEcCCC
Q 017916          261 -CAGFNKTMS----TALSATRAGGKVCLVGMGH  288 (364)
Q Consensus       261 -~~g~~~~~~----~~~~~l~~~G~~v~~g~~~  288 (364)
                       |-.++++..    ..++.|++++.+|..+.+.
T Consensus       207 ~~Plt~~T~hLin~~~l~~mk~ga~lVNtaRG~  239 (324)
T COG1052         207 HCPLTPETRHLINAEELAKMKPGAILVNTARGG  239 (324)
T ss_pred             eCCCChHHhhhcCHHHHHhCCCCeEEEECCCcc
Confidence             444444332    4778999999999887543

>PRK08762 molybdopterin biosynthesis protein MoeB; Validated

Probab=93.28  E-value=1.1  Score=42.02  Aligned_cols=35  Identities=40%  Similarity=0.494  Sum_probs=31.2

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecC
Q 017916          181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVD  215 (364)
Q Consensus       181 ~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~  215 (364)
                      .+.+|+|.|+|++|..++..+...|...+..++.+
T Consensus       134 ~~~~VlvvG~GG~Gs~ia~~La~~Gvg~i~lvD~d  168 (376)
T PRK08762        134 LEARVLLIGAGGLGSPAALYLAAAGVGTLGIVDHD  168 (376)
T ss_pred             hcCcEEEECCCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence            45789999999999999999999999988888765

>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional

Probab=93.26  E-value=1.1  Score=39.36  Aligned_cols=82  Identities=18%  Similarity=0.327  Sum_probs=47.2

Q ss_pred             CCCEEEEEcC---CHHHHHHHHHHHHCCCCEEEEEecCh--hHH-HHHHHcCCC-eEEecCCC-cccHHHHHHHHHHHcC
Q 017916          181 PETNVLIMGA---GPIGLVTMLGARAFGAPRIVIVDVDD--YRL-SVAKELGAD-NIVKVSTN-LQDIAEEVEKIQKAMG  252 (364)
Q Consensus       181 ~g~~VLI~Ga---g~~G~~ai~la~~~g~~~vv~~~~~~--~~~-~~~~~lg~~-~~~~~~~~-~~~~~~~i~~~~~~~~  252 (364)
                      .+.+++|+|+   +++|.+.++.+...|+ .|+.++++.  +.. ++.++++.. ..+..|-. .++..+.+..+.+. .
T Consensus         6 ~~k~~lItGa~~s~GIG~a~a~~la~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~-~   83 (256)
T PRK07889          6 EGKRILVTGVITDSSIAFHVARVAQEQGA-EVVLTGFGRALRLTERIAKRLPEPAPVLELDVTNEEHLASLADRVREH-V   83 (256)
T ss_pred             cCCEEEEeCCCCcchHHHHHHHHHHHCCC-EEEEecCccchhHHHHHHHhcCCCCcEEeCCCCCHHHHHHHHHHHHHH-c
Confidence            4678999985   6899999998888999 456565432  222 233444421 12222221 22333333333322 3


Q ss_pred             CCccEEEECCCC
Q 017916          253 TGIDVSFDCAGF  264 (364)
Q Consensus       253 ~~~d~vid~~g~  264 (364)
                      +++|++|+++|.
T Consensus        84 g~iD~li~nAG~   95 (256)
T PRK07889         84 DGLDGVVHSIGF   95 (256)
T ss_pred             CCCcEEEEcccc
Confidence            579999998873

>PRK12746 short chain dehydrogenase; Provisional

Probab=93.25  E-value=0.94  Score=39.58  Aligned_cols=83  Identities=18%  Similarity=0.304  Sum_probs=47.6

Q ss_pred             CCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHH-HHHHc---CCC-eEEecCC-CcccHHHHHHHHHHHc---
Q 017916          182 ETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLS-VAKEL---GAD-NIVKVST-NLQDIAEEVEKIQKAM---  251 (364)
Q Consensus       182 g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~-~~~~l---g~~-~~~~~~~-~~~~~~~~i~~~~~~~---  251 (364)
                      +.+++|+|+ |.+|...++.+...|+++++...++.++.+ ....+   +.. ..+..+- ..+++.+.++......   
T Consensus         6 ~~~ilItGasg~iG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~~~   85 (254)
T PRK12746          6 GKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREIESNGGKAFLIEADLNSIDGVKKLVEQLKNELQIR   85 (254)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCcCCHHHHHHHHHHHHHHhccc
Confidence            578999998 999999999888889954443445554432 22232   221 1222221 1233333333333221   


Q ss_pred             --CCCccEEEECCCC
Q 017916          252 --GTGIDVSFDCAGF  264 (364)
Q Consensus       252 --~~~~d~vid~~g~  264 (364)
                        ..++|++|.++|.
T Consensus        86 ~~~~~id~vi~~ag~  100 (254)
T PRK12746         86 VGTSEIDILVNNAGI  100 (254)
T ss_pred             cCCCCccEEEECCCC
Confidence              1469999998864

>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1

Probab=93.22  E-value=1.6  Score=35.52  Aligned_cols=87  Identities=16%  Similarity=0.230  Sum_probs=56.6

Q ss_pred             EEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcCCCccEEEECCC
Q 017916          184 NVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAG  263 (364)
Q Consensus       184 ~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid~~g  263 (364)
                      +|-+.|.|..|...++-+...|+ .|.+.++++++.+.+.+.|+..+   +    +    .+++.    ...|+||-|+.
T Consensus         3 ~Ig~IGlG~mG~~~a~~L~~~g~-~v~~~d~~~~~~~~~~~~g~~~~---~----s----~~e~~----~~~dvvi~~v~   66 (163)
T PF03446_consen    3 KIGFIGLGNMGSAMARNLAKAGY-EVTVYDRSPEKAEALAEAGAEVA---D----S----PAEAA----EQADVVILCVP   66 (163)
T ss_dssp             EEEEE--SHHHHHHHHHHHHTTT-EEEEEESSHHHHHHHHHTTEEEE---S----S----HHHHH----HHBSEEEE-SS
T ss_pred             EEEEEchHHHHHHHHHHHHhcCC-eEEeeccchhhhhhhHHhhhhhh---h----h----hhhHh----hcccceEeecc
Confidence            68888999999988888888899 67888999999888877774322   1    1    22232    23589998888


Q ss_pred             CHHHHHHH------HHhcccCCEEEEEcC
Q 017916          264 FNKTMSTA------LSATRAGGKVCLVGM  286 (364)
Q Consensus       264 ~~~~~~~~------~~~l~~~G~~v~~g~  286 (364)
                      +.+.....      +..+.++..++.++.
T Consensus        67 ~~~~v~~v~~~~~i~~~l~~g~iiid~sT   95 (163)
T PF03446_consen   67 DDDAVEAVLFGENILAGLRPGKIIIDMST   95 (163)
T ss_dssp             SHHHHHHHHHCTTHGGGS-TTEEEEE-SS
T ss_pred             cchhhhhhhhhhHHhhccccceEEEecCC
Confidence            76555554      334556666776654

1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....

>PRK00216 ubiE ubiquinone/menaquinone biosynthesis methyltransferase; Reviewed

Probab=93.21  E-value=2.1  Score=36.98  Aligned_cols=104  Identities=19%  Similarity=0.305  Sum_probs=64.9

Q ss_pred             HHcCCCCCCEEEEEcCCHHHHHHHHHHHHCC-CCEEEEEecChhHHHHHHHcCC----CeEEecCCCcccHHHHHHHHHH
Q 017916          175 RRANIGPETNVLIMGAGPIGLVTMLGARAFG-APRIVIVDVDDYRLSVAKELGA----DNIVKVSTNLQDIAEEVEKIQK  249 (364)
Q Consensus       175 ~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g-~~~vv~~~~~~~~~~~~~~lg~----~~~~~~~~~~~~~~~~i~~~~~  249 (364)
                      +....+++.+||-.|+|. |..+..+++..+ ...+++++.+++..+.+++.-.    ...+.+..  .++.+    .. 
T Consensus        45 ~~~~~~~~~~vldiG~G~-G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~--~d~~~----~~-  116 (239)
T PRK00216         45 KWLGVRPGDKVLDLACGT-GDLAIALAKAVGKTGEVVGLDFSEGMLAVGREKLRDLGLSGNVEFVQ--GDAEA----LP-  116 (239)
T ss_pred             HHhCCCCCCeEEEeCCCC-CHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHhhcccccccCeEEEe--ccccc----CC-
Confidence            445566788999998866 778888888775 3379999998887777765321    11011100  11110    00 


Q ss_pred             HcCCCccEEEECCC------CHHHHHHHHHhcccCCEEEEEcC
Q 017916          250 AMGTGIDVSFDCAG------FNKTMSTALSATRAGGKVCLVGM  286 (364)
Q Consensus       250 ~~~~~~d~vid~~g------~~~~~~~~~~~l~~~G~~v~~g~  286 (364)
                      .....+|+|+....      ....+..+.+.|+++|.++.+..
T Consensus       117 ~~~~~~D~I~~~~~l~~~~~~~~~l~~~~~~L~~gG~li~~~~  159 (239)
T PRK00216        117 FPDNSFDAVTIAFGLRNVPDIDKALREMYRVLKPGGRLVILEF  159 (239)
T ss_pred             CCCCCccEEEEecccccCCCHHHHHHHHHHhccCCcEEEEEEe
Confidence            11346898874321      24567788999999999988754

>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional

Probab=93.18  E-value=0.87  Score=41.49  Aligned_cols=89  Identities=12%  Similarity=0.177  Sum_probs=57.9

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcCCCccEEEE
Q 017916          181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  260 (364)
Q Consensus       181 ~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid  260 (364)
                      .|.+|.|.|.|.+|...++.++.+|+ .|++.+.+.++..     +.....    ...+    +.++.    ...|+|+.
T Consensus       135 ~g~tvgIvG~G~IG~~vA~~l~afG~-~V~~~~~~~~~~~-----~~~~~~----~~~~----l~e~l----~~aDvvv~  196 (312)
T PRK15469        135 EDFTIGILGAGVLGSKVAQSLQTWGF-PLRCWSRSRKSWP-----GVQSFA----GREE----LSAFL----SQTRVLIN  196 (312)
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCCCCCC-----Cceeec----cccc----HHHHH----hcCCEEEE
Confidence            57899999999999999999999999 5777765443211     111111    0112    22222    35788888


Q ss_pred             CCCCHHH----H-HHHHHhcccCCEEEEEcCC
Q 017916          261 CAGFNKT----M-STALSATRAGGKVCLVGMG  287 (364)
Q Consensus       261 ~~g~~~~----~-~~~~~~l~~~G~~v~~g~~  287 (364)
                      +....+.    + ...++.|+++..++.++.+
T Consensus       197 ~lPlt~~T~~li~~~~l~~mk~ga~lIN~aRG  228 (312)
T PRK15469        197 LLPNTPETVGIINQQLLEQLPDGAYLLNLARG  228 (312)
T ss_pred             CCCCCHHHHHHhHHHHHhcCCCCcEEEECCCc
Confidence            7664322    1 2467788999988888753

>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=93.14  E-value=0.71  Score=37.88  Aligned_cols=78  Identities=14%  Similarity=0.182  Sum_probs=52.3

Q ss_pred             CCCCCEEEEEcCCH-HHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcCCCccE
Q 017916          179 IGPETNVLIMGAGP-IGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDV  257 (364)
Q Consensus       179 ~~~g~~VLI~Gag~-~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~  257 (364)
                      --.|.+|||.|+|. +|..++..++..|+ .+.++.+..                     +++.+.+        ..+|+
T Consensus        41 ~l~gk~vlViG~G~~~G~~~a~~L~~~g~-~V~v~~r~~---------------------~~l~~~l--------~~aDi   90 (168)
T cd01080          41 DLAGKKVVVVGRSNIVGKPLAALLLNRNA-TVTVCHSKT---------------------KNLKEHT--------KQADI   90 (168)
T ss_pred             CCCCCEEEEECCcHHHHHHHHHHHhhCCC-EEEEEECCc---------------------hhHHHHH--------hhCCE
Confidence            35789999999976 69989999998999 455554331                     1111111        35899


Q ss_pred             EEECCCCHHHHHHHHHhcccCCEEEEEcCCC
Q 017916          258 SFDCAGFNKTMSTALSATRAGGKVCLVGMGH  288 (364)
Q Consensus       258 vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~  288 (364)
                      ||.+++++..+..  +.++++-.++.++.+.
T Consensus        91 VIsat~~~~ii~~--~~~~~~~viIDla~pr  119 (168)
T cd01080          91 VIVAVGKPGLVKG--DMVKPGAVVIDVGINR  119 (168)
T ss_pred             EEEcCCCCceecH--HHccCCeEEEEccCCC
Confidence            9999997654332  3466666677776543

NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a

>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase

Probab=93.13  E-value=1.2  Score=42.03  Aligned_cols=39  Identities=26%  Similarity=0.315  Sum_probs=30.9

Q ss_pred             CCCCCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChh
Q 017916          178 NIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDY  217 (364)
Q Consensus       178 ~~~~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~  217 (364)
                      +-..+.+|||+|+ |.+|..+++.+...|. .|+++.++..
T Consensus        56 ~~~~~~kVLVtGatG~IG~~l~~~Ll~~G~-~V~~l~R~~~   95 (390)
T PLN02657         56 KEPKDVTVLVVGATGYIGKFVVRELVRRGY-NVVAVAREKS   95 (390)
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEEechh
Confidence            3456789999998 9999999999988898 4666666553

>PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate

Probab=93.13  E-value=0.61  Score=35.89  Aligned_cols=92  Identities=20%  Similarity=0.209  Sum_probs=52.7

Q ss_pred             EEEEEcC-CHHHHHHHHHHHHC-CCCEEEEEecCh-hHHHHHHHcC----CCeEEecCCCcccHHHHHHHHHHHcCCCcc
Q 017916          184 NVLIMGA-GPIGLVTMLGARAF-GAPRIVIVDVDD-YRLSVAKELG----ADNIVKVSTNLQDIAEEVEKIQKAMGTGID  256 (364)
Q Consensus       184 ~VLI~Ga-g~~G~~ai~la~~~-g~~~vv~~~~~~-~~~~~~~~lg----~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d  256 (364)
                      +|.|.|+ |.+|...++++... .++.+..+.++. ....+...++    .... .+.+  .+    ...+     .++|
T Consensus         1 rV~IvGAtG~vG~~l~~lL~~hp~~e~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~~~~--~~----~~~~-----~~~D   68 (121)
T PF01118_consen    1 RVAIVGATGYVGRELLRLLAEHPDFELVALVSSSRSAGKPLSEVFPHPKGFEDL-SVED--AD----PEEL-----SDVD   68 (121)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTSTEEEEEEEESTTTTTSBHHHTTGGGTTTEEE-BEEE--TS----GHHH-----TTES
T ss_pred             CEEEECCCCHHHHHHHHHHhcCCCccEEEeeeeccccCCeeehhccccccccce-eEee--cc----hhHh-----hcCC
Confidence            5889997 99999999998763 554444454444 2222322222    1111 1111  01    1111     5799


Q ss_pred             EEEECCCCHHHHHHHHHhcccCCEEEEEcCC
Q 017916          257 VSFDCAGFNKTMSTALSATRAGGKVCLVGMG  287 (364)
Q Consensus       257 ~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~  287 (364)
                      ++|.|.+.....+..-+.+..+-+++.++..
T Consensus        69 vvf~a~~~~~~~~~~~~~~~~g~~ViD~s~~   99 (121)
T PF01118_consen   69 VVFLALPHGASKELAPKLLKAGIKVIDLSGD   99 (121)
T ss_dssp             EEEE-SCHHHHHHHHHHHHHTTSEEEESSST
T ss_pred             EEEecCchhHHHHHHHHHhhCCcEEEeCCHH
Confidence            9999999555544555556777788887643

This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C ....

>cd05211 NAD_bind_Glu_Leu_Phe_Val NAD(P) binding domain of glutamate dehydrogenase, leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase

Probab=93.10  E-value=1.3  Score=37.98  Aligned_cols=78  Identities=26%  Similarity=0.284  Sum_probs=50.3

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecCh----------hHHHHHHHcCCCeEEecCCCcccHHHHHHHHHH
Q 017916          180 GPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDD----------YRLSVAKELGADNIVKVSTNLQDIAEEVEKIQK  249 (364)
Q Consensus       180 ~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~----------~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~  249 (364)
                      -.|.+|+|.|-|.+|+.+++++...|+++|.+.+.+.          +..+..++.+...  .+..  .+..+ -.++  
T Consensus        21 l~g~~vaIqGfGnVG~~~a~~L~~~G~~vV~vsD~~g~i~~~Gld~~~l~~~~~~~~~~~--~~~~--~~~~~-~~~l--   93 (217)
T cd05211          21 LEGLTVAVQGLGNVGWGLAKKLAEEGGKVLAVSDPDGYIYDPGITTEELINYAVALGGSA--RVKV--QDYFP-GEAI--   93 (217)
T ss_pred             cCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEEcCCCcEECCCCCHHHHHHHHHhhCCcc--ccCc--ccccC-cccc--
Confidence            3688999999999999999999999997777777766          5666555544221  1111  00000 0011  


Q ss_pred             HcCCCccEEEECCCCH
Q 017916          250 AMGTGIDVSFDCAGFN  265 (364)
Q Consensus       250 ~~~~~~d~vid~~g~~  265 (364)
                       ...++|+++-|+...
T Consensus        94 -~~~~~DVlipaA~~~  108 (217)
T cd05211          94 -LGLDVDIFAPCALGN  108 (217)
T ss_pred             -eeccccEEeeccccC
Confidence             134789999888743

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NAD(P)+. This subfamily includes glutamate, leucine, phenylalanine, and valine DHs. Glutamate DH is a multi-domain enzyme that catalyzes the reaction from glutamate to 2-oxyoglutarate and ammonia in the presence of NAD or NADP. It is present in all organisms. Enzymes involved in ammonia assimilation are typically NADP+-dependent, while those involved in glutamate catabolism are generally NAD+-dependent. As in other NAD+-dependent DHs, monomers in this family have 2 domains separated by a deep cleft. Here the c-terminal domain contains a modified NAD-binding Rossmann fold with 7 rather than the usual 6 beta strands and one strand anti-parral

>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=93.09  E-value=0.57  Score=41.85  Aligned_cols=86  Identities=17%  Similarity=0.228  Sum_probs=58.4

Q ss_pred             HHHHHHcCC-CCCCEEEEEcCCH-HHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHH
Q 017916          171 LHACRRANI-GPETNVLIMGAGP-IGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQ  248 (364)
Q Consensus       171 ~~~l~~~~~-~~g~~VLI~Gag~-~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~  248 (364)
                      +..++..++ -.|.+|+|.|.|. +|..++.++...|++ |.++.+..                     .++.    +..
T Consensus       146 ~~ll~~~~i~l~Gk~vvVIGrs~~VG~pla~lL~~~gat-Vtv~~s~t---------------------~~l~----~~~  199 (286)
T PRK14175        146 MEILKHADIDLEGKNAVVIGRSHIVGQPVSKLLLQKNAS-VTILHSRS---------------------KDMA----SYL  199 (286)
T ss_pred             HHHHHHcCCCCCCCEEEEECCCchhHHHHHHHHHHCCCe-EEEEeCCc---------------------hhHH----HHH
Confidence            334455432 4789999999855 999999999999995 44443211                     1111    121


Q ss_pred             HHcCCCccEEEECCCCHHHHHHHHHhcccCCEEEEEcCCC
Q 017916          249 KAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGH  288 (364)
Q Consensus       249 ~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~  288 (364)
                          ...|++|.++|.+..+..  +.++++..++.+|...
T Consensus       200 ----~~ADIVIsAvg~p~~i~~--~~vk~gavVIDvGi~~  233 (286)
T PRK14175        200 ----KDADVIVSAVGKPGLVTK--DVVKEGAVIIDVGNTP  233 (286)
T ss_pred             ----hhCCEEEECCCCCcccCH--HHcCCCcEEEEcCCCc
Confidence                468999999997766554  4578888888888543

>PRK05599 hypothetical protein; Provisional

Probab=93.09  E-value=1.2  Score=38.98  Aligned_cols=78  Identities=18%  Similarity=0.214  Sum_probs=45.4

Q ss_pred             EEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHH-H---HcCCC--eEEecCCC-cccHHHHHHHHHHHcCCCc
Q 017916          184 NVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-K---ELGAD--NIVKVSTN-LQDIAEEVEKIQKAMGTGI  255 (364)
Q Consensus       184 ~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~-~---~lg~~--~~~~~~~~-~~~~~~~i~~~~~~~~~~~  255 (364)
                      ++||+|+ +++|.+.+.... .|. .|+.+.++.++.+.+ +   +.+..  ..+..|-. .++..+.+..+.+. .+++
T Consensus         2 ~vlItGas~GIG~aia~~l~-~g~-~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~-~g~i   78 (246)
T PRK05599          2 SILILGGTSDIAGEIATLLC-HGE-DVVLAARRPEAAQGLASDLRQRGATSVHVLSFDAQDLDTHRELVKQTQEL-AGEI   78 (246)
T ss_pred             eEEEEeCccHHHHHHHHHHh-CCC-EEEEEeCCHHHHHHHHHHHHhccCCceEEEEcccCCHHHHHHHHHHHHHh-cCCC
Confidence            6899998 999988888766 487 566666666655432 2   23432  22333222 23333333333322 3579


Q ss_pred             cEEEECCCC
Q 017916          256 DVSFDCAGF  264 (364)
Q Consensus       256 d~vid~~g~  264 (364)
                      |+++.++|.
T Consensus        79 d~lv~nag~   87 (246)
T PRK05599         79 SLAVVAFGI   87 (246)
T ss_pred             CEEEEecCc
Confidence            999988874

>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

Probab=92.98  E-value=1  Score=45.81  Aligned_cols=82  Identities=24%  Similarity=0.360  Sum_probs=50.5

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHH-HHc----CCCe--EEecCC-CcccHHHHHHHHHHHc
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KEL----GADN--IVKVST-NLQDIAEEVEKIQKAM  251 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~-~~l----g~~~--~~~~~~-~~~~~~~~i~~~~~~~  251 (364)
                      .+.++||+|+ |.+|.+.++.+...|+ .|+.++++.++.+.+ +.+    +...  .+..+- ...++.+.+.+.... 
T Consensus       413 ~gkvvLVTGasggIG~aiA~~La~~Ga-~Vvi~~r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~~i~~~-  490 (676)
T TIGR02632       413 ARRVAFVTGGAGGIGRETARRLAAEGA-HVVLADLNLEAAEAVAAEINGQFGAGRAVALKMDVTDEQAVKAAFADVALA-  490 (676)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHHHHHHHHHh-
Confidence            4789999998 9999999999988999 567777766554332 222    3211  122221 123333333333322 


Q ss_pred             CCCccEEEECCCC
Q 017916          252 GTGIDVSFDCAGF  264 (364)
Q Consensus       252 ~~~~d~vid~~g~  264 (364)
                      -+++|++|+++|.
T Consensus       491 ~g~iDilV~nAG~  503 (676)
T TIGR02632       491 YGGVDIVVNNAGI  503 (676)
T ss_pred             cCCCcEEEECCCC
Confidence            2479999999874

>PRK12827 short chain dehydrogenase; Provisional

Probab=92.96  E-value=1.1  Score=38.91  Aligned_cols=31  Identities=29%  Similarity=0.483  Sum_probs=25.3

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEE
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIV  212 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~  212 (364)
                      .+.++||+|+ |.+|...+..+...|++ ++.+
T Consensus         5 ~~~~ilItGasg~iG~~la~~l~~~g~~-v~~~   36 (249)
T PRK12827          5 DSRRVLITGGSGGLGRAIAVRLAADGAD-VIVL   36 (249)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCe-EEEE
Confidence            3568999998 99999999888889995 4443

>PLN00141 Tic62-NAD(P)-related group II protein; Provisional

Probab=92.90  E-value=1  Score=39.49  Aligned_cols=97  Identities=20%  Similarity=0.221  Sum_probs=54.9

Q ss_pred             CCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHH-H-cCCCeE-EecCCCcccHHHHHHHHHHHcCCCccE
Q 017916          182 ETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAK-E-LGADNI-VKVSTNLQDIAEEVEKIQKAMGTGIDV  257 (364)
Q Consensus       182 g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~-~-lg~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~d~  257 (364)
                      +.+|||+|+ |.+|..+++.+...|++ |+++.++.++..... . .++..+ .|+.+   .. +   .+.+..+.++|+
T Consensus        17 ~~~ilItGasG~iG~~l~~~L~~~g~~-V~~~~R~~~~~~~~~~~~~~~~~~~~Dl~d---~~-~---~l~~~~~~~~d~   88 (251)
T PLN00141         17 TKTVFVAGATGRTGKRIVEQLLAKGFA-VKAGVRDVDKAKTSLPQDPSLQIVRADVTE---GS-D---KLVEAIGDDSDA   88 (251)
T ss_pred             CCeEEEECCCcHHHHHHHHHHHhCCCE-EEEEecCHHHHHHhcccCCceEEEEeeCCC---CH-H---HHHHHhhcCCCE
Confidence            578999998 99999999888888984 666656655533221 1 112211 12211   11 1   121212247999


Q ss_pred             EEECCCCHH-------------HHHHHHHhccc--CCEEEEEcC
Q 017916          258 SFDCAGFNK-------------TMSTALSATRA--GGKVCLVGM  286 (364)
Q Consensus       258 vid~~g~~~-------------~~~~~~~~l~~--~G~~v~~g~  286 (364)
                      +|.+.|...             ....+++.+..  .++++.++.
T Consensus        89 vi~~~g~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~iV~iSS  132 (251)
T PLN00141         89 VICATGFRRSFDPFAPWKVDNFGTVNLVEACRKAGVTRFILVSS  132 (251)
T ss_pred             EEECCCCCcCCCCCCceeeehHHHHHHHHHHHHcCCCEEEEEcc
Confidence            998876421             12344555543  367887763

>PRK07102 short chain dehydrogenase; Provisional

Probab=92.87  E-value=1.1  Score=38.82  Aligned_cols=77  Identities=25%  Similarity=0.280  Sum_probs=45.6

Q ss_pred             CEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHH-HHHc---CCCe--EEecCCCcccHHHHHHHHHHHcCCCc
Q 017916          183 TNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSV-AKEL---GADN--IVKVSTNLQDIAEEVEKIQKAMGTGI  255 (364)
Q Consensus       183 ~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~-~~~l---g~~~--~~~~~~~~~~~~~~i~~~~~~~~~~~  255 (364)
                      .+++|+|+ |.+|...++.+...|+ .|+++++++++.+. .+.+   +...  .+..+-.  + .+.+++..+.....+
T Consensus         2 ~~vlItGas~giG~~~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~--~-~~~~~~~~~~~~~~~   77 (243)
T PRK07102          2 KKILIIGATSDIARACARRYAAAGA-RLYLAARDVERLERLADDLRARGAVAVSTHELDIL--D-TASHAAFLDSLPALP   77 (243)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhcCC-EEEEEeCCHHHHHHHHHHHHHhcCCeEEEEecCCC--C-hHHHHHHHHHHhhcC
Confidence            47999998 9999999999988899 56777777665432 2222   1111  2222211  1 122333332223457


Q ss_pred             cEEEECCC
Q 017916          256 DVSFDCAG  263 (364)
Q Consensus       256 d~vid~~g  263 (364)
                      |+++.++|
T Consensus        78 d~vv~~ag   85 (243)
T PRK07102         78 DIVLIAVG   85 (243)
T ss_pred             CEEEECCc
Confidence            99998776

>PRK10258 biotin biosynthesis protein BioC; Provisional

Probab=92.86  E-value=2.6  Score=36.99  Aligned_cols=99  Identities=20%  Similarity=0.311  Sum_probs=63.1

Q ss_pred             HHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCC-CeEEecCCCcccHHHHHHHHHHHcCC
Q 017916          175 RRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGA-DNIVKVSTNLQDIAEEVEKIQKAMGT  253 (364)
Q Consensus       175 ~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~-~~~~~~~~~~~~~~~~i~~~~~~~~~  253 (364)
                      +.....++.+||-.|+|. |..+..+++ .|. .+++++.+++..+.+++... ...+.-     |..    .+. ....
T Consensus        36 ~~l~~~~~~~vLDiGcG~-G~~~~~l~~-~~~-~v~~~D~s~~~l~~a~~~~~~~~~~~~-----d~~----~~~-~~~~  102 (251)
T PRK10258         36 AMLPQRKFTHVLDAGCGP-GWMSRYWRE-RGS-QVTALDLSPPMLAQARQKDAADHYLAG-----DIE----SLP-LATA  102 (251)
T ss_pred             HhcCccCCCeEEEeeCCC-CHHHHHHHH-cCC-eEEEEECCHHHHHHHHhhCCCCCEEEc-----Ccc----cCc-CCCC
Confidence            444445678899998754 555555554 466 79999999998888876532 122211     111    010 0134


Q ss_pred             CccEEEECCC------CHHHHHHHHHhcccCCEEEEEcC
Q 017916          254 GIDVSFDCAG------FNKTMSTALSATRAGGKVCLVGM  286 (364)
Q Consensus       254 ~~d~vid~~g------~~~~~~~~~~~l~~~G~~v~~g~  286 (364)
                      .+|+|+....      ....+.++.+.|+|+|.++....
T Consensus       103 ~fD~V~s~~~l~~~~d~~~~l~~~~~~Lk~gG~l~~~~~  141 (251)
T PRK10258        103 TFDLAWSNLAVQWCGNLSTALRELYRVVRPGGVVAFTTL  141 (251)
T ss_pred             cEEEEEECchhhhcCCHHHHHHHHHHHcCCCeEEEEEeC
Confidence            6999986432      13567889999999999987653

>PRK13255 thiopurine S-methyltransferase; Reviewed

Probab=92.86  E-value=0.81  Score=39.33  Aligned_cols=101  Identities=18%  Similarity=0.174  Sum_probs=59.9

Q ss_pred             cCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHH-HHcCCCeEE-------ecCCC-----cccHHHH
Q 017916          177 ANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KELGADNIV-------KVSTN-----LQDIAEE  243 (364)
Q Consensus       177 ~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~-~~lg~~~~~-------~~~~~-----~~~~~~~  243 (364)
                      ....++.+||+.|+|. |.-++.||. .|+ .|++++.++...+.+ ++.+.....       .+...     ..|+.  
T Consensus        33 ~~~~~~~rvL~~gCG~-G~da~~LA~-~G~-~V~avD~s~~Ai~~~~~~~~l~~~~~~~~~~~~~~~~~v~~~~~D~~--  107 (218)
T PRK13255         33 LALPAGSRVLVPLCGK-SLDMLWLAE-QGH-EVLGVELSELAVEQFFAENGLTPQTRQSGEFEHYQAGEITIYCGDFF--  107 (218)
T ss_pred             hCCCCCCeEEEeCCCC-hHhHHHHHh-CCC-eEEEEccCHHHHHHHHHHcCCCccccccccccccccCceEEEECccc--
Confidence            3446678999998765 777777775 699 699999998877654 333332100       00000     01111  


Q ss_pred             HHHHHHHcCCCccEEEECCC----C----HHHHHHHHHhcccCCEEEEE
Q 017916          244 VEKIQKAMGTGIDVSFDCAG----F----NKTMSTALSATRAGGKVCLV  284 (364)
Q Consensus       244 i~~~~~~~~~~~d~vid~~g----~----~~~~~~~~~~l~~~G~~v~~  284 (364)
                        .+.......+|.++|...    .    ...+..+.++|+|+|+++.+
T Consensus       108 --~l~~~~~~~fd~v~D~~~~~~l~~~~R~~~~~~l~~lL~pgG~~~l~  154 (218)
T PRK13255        108 --ALTAADLADVDAVYDRAALIALPEEMRERYVQQLAALLPAGCRGLLV  154 (218)
T ss_pred             --CCCcccCCCeeEEEehHhHhhCCHHHHHHHHHHHHHHcCCCCeEEEE
Confidence              011101246899998542    1    24577889999999875544

>PF02558 ApbA: Ketopantoate reductase PanE/ApbA; InterPro: IPR013332 ApbA, the ketopantoate reductase enzyme 1

Probab=92.86  E-value=0.12  Score=41.45  Aligned_cols=95  Identities=18%  Similarity=0.159  Sum_probs=55.3

Q ss_pred             EEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecC----CCcccHHHHHHHHHHHcCCCccEEEE
Q 017916          185 VLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVS----TNLQDIAEEVEKIQKAMGTGIDVSFD  260 (364)
Q Consensus       185 VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~----~~~~~~~~~i~~~~~~~~~~~d~vid  260 (364)
                      |+|.|+|++|...+..++..|. .|..+.+++ +.+.+++-|......-.    .........     ......+|++|-
T Consensus         1 I~I~G~GaiG~~~a~~L~~~g~-~V~l~~r~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~D~viv   73 (151)
T PF02558_consen    1 ILIIGAGAIGSLYAARLAQAGH-DVTLVSRSP-RLEAIKEQGLTITGPDGDETVQPPIVISAP-----SADAGPYDLVIV   73 (151)
T ss_dssp             EEEESTSHHHHHHHHHHHHTTC-EEEEEESHH-HHHHHHHHCEEEEETTEEEEEEEEEEESSH-----GHHHSTESEEEE
T ss_pred             CEEECcCHHHHHHHHHHHHCCC-ceEEEEccc-cHHhhhheeEEEEecccceecccccccCcc-----hhccCCCcEEEE
Confidence            6889999999988888888888 566666666 66666665543211000    000000000     011368999999


Q ss_pred             CCCCH---HHHHHHHHhcccCCEEEEEcC
Q 017916          261 CAGFN---KTMSTALSATRAGGKVCLVGM  286 (364)
Q Consensus       261 ~~g~~---~~~~~~~~~l~~~G~~v~~g~  286 (364)
                      |+=+.   +.++.+...+.+...++.+..
T Consensus        74 ~vKa~~~~~~l~~l~~~~~~~t~iv~~qN  102 (151)
T PF02558_consen   74 AVKAYQLEQALQSLKPYLDPNTTIVSLQN  102 (151)
T ss_dssp             -SSGGGHHHHHHHHCTGEETTEEEEEESS
T ss_pred             EecccchHHHHHHHhhccCCCcEEEEEeC
Confidence            88643   344445555566667777643

1.1.169 from EC of Salmonella typhimurium is required for the synthesis of thiamine via the alternative pyrimidine biosynthetic pathway []. Precursors to the pyrimidine moiety of thiamine are synthesized de novo by the purine biosynthetic pathway or the alternative pyrimidine biosynthetic (APB) pathway. The ApbA protein catalyzes the NADPH-specific reduction of ketopantoic acid to pantoic acid. This activity had previously been associated with the pantothenate biosynthetic gene panE []. ApbA and PanE are allelic [].; GO: 0008677 2-dehydropantoate 2-reductase activity, 0055114 oxidation-reduction process; PDB: 3EGO_B 3HWR_B 2QYT_A 1YJQ_A 1KS9_A 2OFP_A 1YON_A 3G17_E 3GHY_B 3I83_B ....

>PRK08278 short chain dehydrogenase; Provisional

Probab=92.84  E-value=1.4  Score=39.21  Aligned_cols=82  Identities=26%  Similarity=0.300  Sum_probs=47.7

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhH--------HHH---HHHcCCCe-EEecC-CCcccHHHHHHH
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYR--------LSV---AKELGADN-IVKVS-TNLQDIAEEVEK  246 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~--------~~~---~~~lg~~~-~~~~~-~~~~~~~~~i~~  246 (364)
                      .+.++||+|+ |.+|...++.+...|++ |+++.++.++        .+.   ++..+... .+..+ ...++..+.+..
T Consensus         5 ~~k~vlItGas~gIG~~ia~~l~~~G~~-V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~   83 (273)
T PRK08278          5 SGKTLFITGASRGIGLAIALRAARDGAN-IVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQALPLVGDVRDEDQVAAAVAK   83 (273)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCE-EEEEecccccccchhhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHH
Confidence            4578999998 99999999988889994 6666554321        111   22233321 12112 122333344444


Q ss_pred             HHHHcCCCccEEEECCCC
Q 017916          247 IQKAMGTGIDVSFDCAGF  264 (364)
Q Consensus       247 ~~~~~~~~~d~vid~~g~  264 (364)
                      +.+.. +++|++|+++|.
T Consensus        84 ~~~~~-g~id~li~~ag~  100 (273)
T PRK08278         84 AVERF-GGIDICVNNASA  100 (273)
T ss_pred             HHHHh-CCCCEEEECCCC
Confidence            33322 379999998874

>TIGR02685 pter_reduc_Leis pteridine reductase

Probab=92.83  E-value=1.1  Score=39.51  Aligned_cols=28  Identities=21%  Similarity=0.307  Sum_probs=23.6

Q ss_pred             EEEEEcC-CHHHHHHHHHHHHCCCCEEEEE
Q 017916          184 NVLIMGA-GPIGLVTMLGARAFGAPRIVIV  212 (364)
Q Consensus       184 ~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~  212 (364)
                      ++||+|+ +++|.+.++.+...|++ |+.+
T Consensus         3 ~~lITGas~gIG~~~a~~l~~~G~~-V~~~   31 (267)
T TIGR02685         3 AAVVTGAAKRIGSSIAVALHQEGYR-VVLH   31 (267)
T ss_pred             EEEEeCCCCcHHHHHHHHHHhCCCe-EEEE
Confidence            6899998 99999999999999995 4444

Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.

>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=92.83  E-value=0.58  Score=41.90  Aligned_cols=82  Identities=16%  Similarity=0.184  Sum_probs=56.1

Q ss_pred             HHHcC-CCCCCEEEEEcCCH-HHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHc
Q 017916          174 CRRAN-IGPETNVLIMGAGP-IGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAM  251 (364)
Q Consensus       174 l~~~~-~~~g~~VLI~Gag~-~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~  251 (364)
                      ++..+ --.|.+|+|.|.|. +|...+.++...|+ .|.++.+.   .                  +++.+.+       
T Consensus       150 L~~~~i~l~Gk~vvViG~gg~vGkpia~~L~~~ga-tVtv~~~~---t------------------~~L~~~~-------  200 (283)
T PRK14192        150 LKAYNIELAGKHAVVVGRSAILGKPMAMMLLNANA-TVTICHSR---T------------------QNLPELV-------  200 (283)
T ss_pred             HHHcCCCCCCCEEEEECCcHHHHHHHHHHHHhCCC-EEEEEeCC---c------------------hhHHHHh-------
Confidence            44433 35788999999966 99999999999999 56655321   0                  1111111       


Q ss_pred             CCCccEEEECCCCHHHHHHHHHhcccCCEEEEEcCC
Q 017916          252 GTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMG  287 (364)
Q Consensus       252 ~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~  287 (364)
                       ..+|++|+++|.+..+.  .+.++++..++.++..
T Consensus       201 -~~aDIvI~AtG~~~~v~--~~~lk~gavViDvg~n  233 (283)
T PRK14192        201 -KQADIIVGAVGKPELIK--KDWIKQGAVVVDAGFH  233 (283)
T ss_pred             -ccCCEEEEccCCCCcCC--HHHcCCCCEEEEEEEe
Confidence             46899999998655333  3568888888888754

>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=92.83  E-value=0.85  Score=39.53  Aligned_cols=81  Identities=28%  Similarity=0.402  Sum_probs=46.4

Q ss_pred             CCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEE-ecChhHHHHH-HHc---CCCe-EEecCCC-cccHHHHHHHHHHHcCC
Q 017916          182 ETNVLIMGA-GPIGLVTMLGARAFGAPRIVIV-DVDDYRLSVA-KEL---GADN-IVKVSTN-LQDIAEEVEKIQKAMGT  253 (364)
Q Consensus       182 g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~-~~~~~~~~~~-~~l---g~~~-~~~~~~~-~~~~~~~i~~~~~~~~~  253 (364)
                      +.++||+|+ |.+|...+..+...|++ ++.+ +++.++.+.+ ..+   +... ++..+-. .+++.+.+..+.... +
T Consensus         5 ~~~ilI~Gasg~iG~~la~~l~~~g~~-v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~   82 (247)
T PRK05565          5 GKVAIVTGASGGIGRAIAELLAKEGAK-VVIAYDINEEAAQELLEEIKEEGGDAIAVKADVSSEEDVENLVEQIVEKF-G   82 (247)
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCE-EEEEcCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHh-C
Confidence            468999998 99999988888788995 5555 6665544322 222   2211 2222211 123333333333222 3


Q ss_pred             CccEEEECCCC
Q 017916          254 GIDVSFDCAGF  264 (364)
Q Consensus       254 ~~d~vid~~g~  264 (364)
                      ++|++|.+.|.
T Consensus        83 ~id~vi~~ag~   93 (247)
T PRK05565         83 KIDILVNNAGI   93 (247)
T ss_pred             CCCEEEECCCc
Confidence            69999998873

>PF01408 GFO_IDH_MocA: Oxidoreductase family, NAD-binding Rossmann fold; InterPro: IPR000683 This group of enzymes utilise NADP or NAD, and is known as the GFO/IDH/MOCA family in UniProtKB/Swiss-Prot

Probab=92.83  E-value=3  Score=31.67  Aligned_cols=88  Identities=23%  Similarity=0.262  Sum_probs=58.2

Q ss_pred             EEEEEcCCHHHHHHHHHHHHC--CCCEEEEEecChhHHHH-HHHcCCCeEEecCCCcccHHHHHHHHHHHcCCCccEEEE
Q 017916          184 NVLIMGAGPIGLVTMLGARAF--GAPRIVIVDVDDYRLSV-AKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  260 (364)
Q Consensus       184 ~VLI~Gag~~G~~ai~la~~~--g~~~vv~~~~~~~~~~~-~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid  260 (364)
                      +|.|.|.|..|.....-++..  +.+.+.+++.++++.+. .++++.. .  |.    ++.    ++..  ..++|+|+-
T Consensus         2 ~v~iiG~G~~g~~~~~~~~~~~~~~~v~~v~d~~~~~~~~~~~~~~~~-~--~~----~~~----~ll~--~~~~D~V~I   68 (120)
T PF01408_consen    2 RVGIIGAGSIGRRHLRALLRSSPDFEVVAVCDPDPERAEAFAEKYGIP-V--YT----DLE----ELLA--DEDVDAVII   68 (120)
T ss_dssp             EEEEESTSHHHHHHHHHHHHTTTTEEEEEEECSSHHHHHHHHHHTTSE-E--ES----SHH----HHHH--HTTESEEEE
T ss_pred             EEEEECCcHHHHHHHHHHHhcCCCcEEEEEEeCCHHHHHHHHHHhccc-c--hh----HHH----HHHH--hhcCCEEEE
Confidence            578899998888877555554  45444556667666654 4667776 2  22    222    2222  247999999


Q ss_pred             CCCCHHHHHHHHHhcccCCEEEEEc
Q 017916          261 CAGFNKTMSTALSATRAGGKVCLVG  285 (364)
Q Consensus       261 ~~g~~~~~~~~~~~l~~~G~~v~~g  285 (364)
                      ++....+...+..++..|- .+++.
T Consensus        69 ~tp~~~h~~~~~~~l~~g~-~v~~E   92 (120)
T PF01408_consen   69 ATPPSSHAEIAKKALEAGK-HVLVE   92 (120)
T ss_dssp             ESSGGGHHHHHHHHHHTTS-EEEEE
T ss_pred             ecCCcchHHHHHHHHHcCC-EEEEE
Confidence            9998888888888888655 45553

GFO is a glucose--fructose oxidoreductase, which converts D-glucose and D-fructose into D-gluconolactone and D-glucitol in the sorbitol-gluconate pathway. MOCA is a rhizopine catabolism protein which may catalyse the NADH-dependent dehydrogenase reaction involved in rhizopine catabolism. Other proteins belonging to this family include Gal80, a negative regulator for the expression of lactose and galactose metabolic genes; and several hypothetical proteins from yeast, Escherichia coli and Bacillus subtilis. The oxidoreductase, N-terminal domain is almost always associated with the oxidoreductase, C-terminal domain (see IPR004104 from INTERPRO).; GO: 0016491 oxidoreductase activity; PDB: 1LC0_A 1LC3_A 1GCU_A 3IP3_E 3CEA_C 3EVN_A 3NTQ_A 3NTR_B 3NT5_A 3MZ0_A ....

>PLN02730 enoyl-[acyl-carrier-protein] reductase

Probab=92.82  E-value=2.8  Score=38.01  Aligned_cols=30  Identities=23%  Similarity=0.253  Sum_probs=25.8

Q ss_pred             CCCEEEEEcC---CHHHHHHHHHHHHCCCCEEE
Q 017916          181 PETNVLIMGA---GPIGLVTMLGARAFGAPRIV  210 (364)
Q Consensus       181 ~g~~VLI~Ga---g~~G~~ai~la~~~g~~~vv  210 (364)
                      .|.++||+|+   +++|.+.++.+...|+++++
T Consensus         8 ~gk~alITGa~~s~GIG~a~A~~la~~Ga~Vv~   40 (303)
T PLN02730          8 RGKRAFIAGVADDNGYGWAIAKALAAAGAEILV   40 (303)
T ss_pred             CCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEE
Confidence            5789999987   78999999999999996444

>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase

Probab=92.73  E-value=0.56  Score=43.44  Aligned_cols=36  Identities=25%  Similarity=0.207  Sum_probs=29.2

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChh
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDY  217 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~  217 (364)
                      .|.+|||+|+ |.+|..+++.+...|.+ |++++++..
T Consensus         3 ~~k~ilItGatG~IG~~l~~~L~~~G~~-V~~~~r~~~   39 (349)
T TIGR02622         3 QGKKVLVTGHTGFKGSWLSLWLLELGAE-VYGYSLDPP   39 (349)
T ss_pred             CCCEEEEECCCChhHHHHHHHHHHCCCE-EEEEeCCCc
Confidence            3679999998 99999999999999984 666665543

Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.

>TIGR02415 23BDH acetoin reductases

Probab=92.65  E-value=0.96  Score=39.49  Aligned_cols=79  Identities=20%  Similarity=0.281  Sum_probs=46.8

Q ss_pred             EEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHH-HHHH---cCCCe-EEecCC-CcccHHHHHHHHHHHcCCCcc
Q 017916          184 NVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLS-VAKE---LGADN-IVKVST-NLQDIAEEVEKIQKAMGTGID  256 (364)
Q Consensus       184 ~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~-~~~~---lg~~~-~~~~~~-~~~~~~~~i~~~~~~~~~~~d  256 (364)
                      ++||+|+ |.+|...++.+...|+ .++.+.+++++.+ ..+.   .+... .+..+- ..+++.+.+..+... .+++|
T Consensus         2 ~~lItG~sg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~-~~~id   79 (254)
T TIGR02415         2 VALVTGGAQGIGKGIAERLAKDGF-AVAVADLNEETAKETAKEINQAGGKAVAYKLDVSDKDQVFSAIDQAAEK-FGGFD   79 (254)
T ss_pred             EEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHH-cCCCC
Confidence            6899998 9999999999989999 5666666654432 2222   23221 222221 123333334444332 24789


Q ss_pred             EEEECCCC
Q 017916          257 VSFDCAGF  264 (364)
Q Consensus       257 ~vid~~g~  264 (364)
                      ++|.+.|.
T Consensus        80 ~vi~~ag~   87 (254)
T TIGR02415        80 VMVNNAGV   87 (254)
T ss_pred             EEEECCCc
Confidence            99998873

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).

>PRK10669 putative cation:proton antiport protein; Provisional

Probab=92.64  E-value=1.7  Score=43.11  Aligned_cols=93  Identities=13%  Similarity=0.117  Sum_probs=61.5

Q ss_pred             CEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcCCCccEEEECC
Q 017916          183 TNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCA  262 (364)
Q Consensus       183 ~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid~~  262 (364)
                      ++++|.|.|.+|+..++.++..|. .+++++.++++.+.+++.|...+.- |..+   .+.+++.   .-+.+|.++-++
T Consensus       418 ~hiiI~G~G~~G~~la~~L~~~g~-~vvvId~d~~~~~~~~~~g~~~i~G-D~~~---~~~L~~a---~i~~a~~viv~~  489 (558)
T PRK10669        418 NHALLVGYGRVGSLLGEKLLAAGI-PLVVIETSRTRVDELRERGIRAVLG-NAAN---EEIMQLA---HLDCARWLLLTI  489 (558)
T ss_pred             CCEEEECCChHHHHHHHHHHHCCC-CEEEEECCHHHHHHHHHCCCeEEEc-CCCC---HHHHHhc---CccccCEEEEEc
Confidence            789999999999999999999998 5899999999999998887654432 2222   2222222   235788887776


Q ss_pred             CCHHHHH---HHHHhcccCCEEEE
Q 017916          263 GFNKTMS---TALSATRAGGKVCL  283 (364)
Q Consensus       263 g~~~~~~---~~~~~l~~~G~~v~  283 (364)
                      ++.+.-.   .+.+...+.-+++.
T Consensus       490 ~~~~~~~~iv~~~~~~~~~~~iia  513 (558)
T PRK10669        490 PNGYEAGEIVASAREKRPDIEIIA  513 (558)
T ss_pred             CChHHHHHHHHHHHHHCCCCeEEE
Confidence            6533221   23344445555443

>KOG4022 consensus Dihydropteridine reductase DHPR/QDPR [Amino acid transport and metabolism]

Probab=92.63  E-value=1  Score=36.25  Aligned_cols=94  Identities=21%  Similarity=0.315  Sum_probs=58.1

Q ss_pred             CEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHH-----HcCCCcc
Q 017916          183 TNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQK-----AMGTGID  256 (364)
Q Consensus       183 ~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~-----~~~~~~d  256 (364)
                      .+|+|+|+ |++|.++++.-|+.++ -|..++.++...       ++.-+..+ ...+|.++-..+.+     ..+.++|
T Consensus         4 grVivYGGkGALGSacv~~Fkanny-wV~siDl~eNe~-------Ad~sI~V~-~~~swtEQe~~v~~~vg~sL~gekvD   74 (236)
T KOG4022|consen    4 GRVIVYGGKGALGSACVEFFKANNY-WVLSIDLSENEQ-------ADSSILVD-GNKSWTEQEQSVLEQVGSSLQGEKVD   74 (236)
T ss_pred             ceEEEEcCcchHhHHHHHHHHhcCe-EEEEEeeccccc-------ccceEEec-CCcchhHHHHHHHHHHHHhhcccccc
Confidence            57999998 9999999999999999 567776554321       22212221 22344443322221     1267899


Q ss_pred             EEEECCCCH--------H------------------HHHHHHHhcccCCEEEEEc
Q 017916          257 VSFDCAGFN--------K------------------TMSTALSATRAGGKVCLVG  285 (364)
Q Consensus       257 ~vid~~g~~--------~------------------~~~~~~~~l~~~G~~v~~g  285 (364)
                      .||+-+|+-        +                  ....+-.+|+++|-+-+.|
T Consensus        75 av~CVAGGWAGGnAksKdl~KNaDLMwKQSvwtSaIsa~lAt~HLK~GGLL~LtG  129 (236)
T KOG4022|consen   75 AVFCVAGGWAGGNAKSKDLVKNADLMWKQSVWTSAISAKLATTHLKPGGLLQLTG  129 (236)
T ss_pred             eEEEeeccccCCCcchhhhhhchhhHHHHHHHHHHHHHHHHHhccCCCceeeecc
Confidence            999876631        1                  1112345788999887776

>TIGR02992 ectoine_eutC ectoine utilization protein EutC

Probab=92.62  E-value=3.4  Score=37.95  Aligned_cols=93  Identities=18%  Similarity=0.205  Sum_probs=59.5

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHH-HCCCCEEEEEecChhHHH-HHHHc----CCCeEEecCCCcccHHHHHHHHHHHcCC
Q 017916          180 GPETNVLIMGAGPIGLVTMLGAR-AFGAPRIVIVDVDDYRLS-VAKEL----GADNIVKVSTNLQDIAEEVEKIQKAMGT  253 (364)
Q Consensus       180 ~~g~~VLI~Gag~~G~~ai~la~-~~g~~~vv~~~~~~~~~~-~~~~l----g~~~~~~~~~~~~~~~~~i~~~~~~~~~  253 (364)
                      +...+++|.|+|..+.+.+..+. ..+.+.+.+..++.+|.+ +++++    +.. +..+    .+..+.+        .
T Consensus       127 ~~~~~v~iiGaG~qA~~~~~al~~~~~i~~v~V~~R~~~~a~~~a~~~~~~~g~~-v~~~----~~~~~av--------~  193 (326)
T TIGR02992       127 EDSSVVAIFGAGMQARLQLEALTLVRDIRSARIWARDSAKAEALALQLSSLLGID-VTAA----TDPRAAM--------S  193 (326)
T ss_pred             CCCcEEEEECCCHHHHHHHHHHHHhCCccEEEEECCCHHHHHHHHHHHHhhcCce-EEEe----CCHHHHh--------c
Confidence            45578999999988877777665 578888888888887755 33444    432 2221    1222211        4


Q ss_pred             CccEEEECCCCHHHHHHHHHhcccCCEEEEEcC
Q 017916          254 GIDVSFDCAGFNKTMSTALSATRAGGKVCLVGM  286 (364)
Q Consensus       254 ~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~  286 (364)
                      +.|+|+.|+.+.+.+ ...+.++++-++..+|.
T Consensus       194 ~aDiVvtaT~s~~p~-i~~~~l~~g~~i~~vg~  225 (326)
T TIGR02992       194 GADIIVTTTPSETPI-LHAEWLEPGQHVTAMGS  225 (326)
T ss_pred             cCCEEEEecCCCCcE-ecHHHcCCCcEEEeeCC
Confidence            689999998864321 12346788777777774

Members of this protein family are EutA, a predicted arylmalonate decarboxylase found in a conserved ectoine utilization operon of species that include Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti, Silicibacter pomeroyi, Agrobacterium tumefaciens, and Pseudomonas putida. This family belongs to the ornithine cyclodeaminase/mu-crystallin family (pfam02423).

>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus

Probab=92.50  E-value=3.6  Score=31.02  Aligned_cols=92  Identities=18%  Similarity=0.165  Sum_probs=58.7

Q ss_pred             EEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcCCCccEEEECCCC
Q 017916          185 VLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGF  264 (364)
Q Consensus       185 VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid~~g~  264 (364)
                      |+|.|.|.+|...++.++..+. .+++++.++++.+.++..|.. ++.-+..+.   +.+++   ..-..++.++-+.++
T Consensus         1 vvI~G~g~~~~~i~~~L~~~~~-~vvvid~d~~~~~~~~~~~~~-~i~gd~~~~---~~l~~---a~i~~a~~vv~~~~~   72 (116)
T PF02254_consen    1 VVIIGYGRIGREIAEQLKEGGI-DVVVIDRDPERVEELREEGVE-VIYGDATDP---EVLER---AGIEKADAVVILTDD   72 (116)
T ss_dssp             EEEES-SHHHHHHHHHHHHTTS-EEEEEESSHHHHHHHHHTTSE-EEES-TTSH---HHHHH---TTGGCESEEEEESSS
T ss_pred             eEEEcCCHHHHHHHHHHHhCCC-EEEEEECCcHHHHHHHhcccc-cccccchhh---hHHhh---cCccccCEEEEccCC
Confidence            6788999999999999999665 789999999999999888844 333222222   22222   223578888888775


Q ss_pred             HHHHH---HHHHhcccCCEEEEE
Q 017916          265 NKTMS---TALSATRAGGKVCLV  284 (364)
Q Consensus       265 ~~~~~---~~~~~l~~~G~~v~~  284 (364)
                      .+.-.   ...+.+.+..+++..
T Consensus        73 d~~n~~~~~~~r~~~~~~~ii~~   95 (116)
T PF02254_consen   73 DEENLLIALLARELNPDIRIIAR   95 (116)
T ss_dssp             HHHHHHHHHHHHHHTTTSEEEEE
T ss_pred             HHHHHHHHHHHHHHCCCCeEEEE
Confidence            43222   233444556666654

The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....

>PLN02336 phosphoethanolamine N-methyltransferase

Probab=92.49  E-value=1.9  Score=41.92  Aligned_cols=102  Identities=22%  Similarity=0.266  Sum_probs=64.6

Q ss_pred             HHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHc--CCCeEEecCCCcccHHHHHHHHHHHcC
Q 017916          175 RRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKEL--GADNIVKVSTNLQDIAEEVEKIQKAMG  252 (364)
Q Consensus       175 ~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~l--g~~~~~~~~~~~~~~~~~i~~~~~~~~  252 (364)
                      +...++++++||-.|+|. |..++.+++..+. .+++++.+++..+.+++.  +...-+.+..  .++.+    . ....
T Consensus       260 ~~~~~~~~~~vLDiGcG~-G~~~~~la~~~~~-~v~gvDiS~~~l~~A~~~~~~~~~~v~~~~--~d~~~----~-~~~~  330 (475)
T PLN02336        260 DKLDLKPGQKVLDVGCGI-GGGDFYMAENFDV-HVVGIDLSVNMISFALERAIGRKCSVEFEV--ADCTK----K-TYPD  330 (475)
T ss_pred             HhcCCCCCCEEEEEeccC-CHHHHHHHHhcCC-EEEEEECCHHHHHHHHHHhhcCCCceEEEE--cCccc----C-CCCC
Confidence            344567889999998755 5667788887887 799999998877776542  2111011100  11110    0 0012


Q ss_pred             CCccEEEECCC------CHHHHHHHHHhcccCCEEEEEc
Q 017916          253 TGIDVSFDCAG------FNKTMSTALSATRAGGKVCLVG  285 (364)
Q Consensus       253 ~~~d~vid~~g------~~~~~~~~~~~l~~~G~~v~~g  285 (364)
                      +.+|+|+....      ....+..+.+.|+|+|+++...
T Consensus       331 ~~fD~I~s~~~l~h~~d~~~~l~~~~r~LkpgG~l~i~~  369 (475)
T PLN02336        331 NSFDVIYSRDTILHIQDKPALFRSFFKWLKPGGKVLISD  369 (475)
T ss_pred             CCEEEEEECCcccccCCHHHHHHHHHHHcCCCeEEEEEE
Confidence            46999986321      1467789999999999988764

>PRK12480 D-lactate dehydrogenase; Provisional

Probab=92.43  E-value=4  Score=37.53  Aligned_cols=88  Identities=20%  Similarity=0.158  Sum_probs=58.2

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcCCCccEEEE
Q 017916          181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  260 (364)
Q Consensus       181 ~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid  260 (364)
                      .|.+|.|.|.|.+|...++.++.+|. .|++.+.+.+.....    ..    +   ..+    +.+..    ...|+|+-
T Consensus       145 ~g~~VgIIG~G~IG~~vA~~L~~~G~-~V~~~d~~~~~~~~~----~~----~---~~~----l~ell----~~aDiVil  204 (330)
T PRK12480        145 KNMTVAIIGTGRIGAATAKIYAGFGA-TITAYDAYPNKDLDF----LT----Y---KDS----VKEAI----KDADIISL  204 (330)
T ss_pred             CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEeCChhHhhhh----hh----c---cCC----HHHHH----hcCCEEEE
Confidence            56789999999999999999999999 677887665432110    00    1   012    22221    35799888


Q ss_pred             CCCCHH-----HHHHHHHhcccCCEEEEEcCCC
Q 017916          261 CAGFNK-----TMSTALSATRAGGKVCLVGMGH  288 (364)
Q Consensus       261 ~~g~~~-----~~~~~~~~l~~~G~~v~~g~~~  288 (364)
                      ++....     .....+..|+++..++..+.+.
T Consensus       205 ~lP~t~~t~~li~~~~l~~mk~gavlIN~aRG~  237 (330)
T PRK12480        205 HVPANKESYHLFDKAMFDHVKKGAILVNAARGA  237 (330)
T ss_pred             eCCCcHHHHHHHhHHHHhcCCCCcEEEEcCCcc
Confidence            776432     2234667888888888886543

>PRK05600 thiamine biosynthesis protein ThiF; Validated

Probab=92.36  E-value=2  Score=40.16  Aligned_cols=35  Identities=31%  Similarity=0.532  Sum_probs=30.6

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecC
Q 017916          181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVD  215 (364)
Q Consensus       181 ~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~  215 (364)
                      .+.+|+|.|+|++|..++..+.+.|...+..++.+
T Consensus        40 ~~~~VliiG~GglG~~v~~~La~~Gvg~i~ivD~D   74 (370)
T PRK05600         40 HNARVLVIGAGGLGCPAMQSLASAGVGTITLIDDD   74 (370)
T ss_pred             cCCcEEEECCCHHHHHHHHHHHHcCCCEEEEEeCC
Confidence            35789999999999999999999999888888754

>COG4106 Tam Trans-aconitate methyltransferase [General function prediction only]

Probab=92.33  E-value=0.9  Score=38.48  Aligned_cols=97  Identities=22%  Similarity=0.260  Sum_probs=69.4

Q ss_pred             HcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcCCCc
Q 017916          176 RANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGI  255 (364)
Q Consensus       176 ~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~  255 (364)
                      +..+.+-..|.=.|.|. |...-.|+++....++.++++|++..+.+++...+.-+.  .      ..++.|+.  ....
T Consensus        25 ~Vp~~~~~~v~DLGCGp-GnsTelL~~RwP~A~i~GiDsS~~Mla~Aa~rlp~~~f~--~------aDl~~w~p--~~~~   93 (257)
T COG4106          25 RVPLERPRRVVDLGCGP-GNSTELLARRWPDAVITGIDSSPAMLAKAAQRLPDATFE--E------ADLRTWKP--EQPT   93 (257)
T ss_pred             hCCccccceeeecCCCC-CHHHHHHHHhCCCCeEeeccCCHHHHHHHHHhCCCCcee--c------ccHhhcCC--CCcc
Confidence            33445566777778777 888999999987779999999999999888766543221  1      12566643  3467


Q ss_pred             cEEEECCC------CHHHHHHHHHhcccCCEEEE
Q 017916          256 DVSFDCAG------FNKTMSTALSATRAGGKVCL  283 (364)
Q Consensus       256 d~vid~~g------~~~~~~~~~~~l~~~G~~v~  283 (364)
                      |++|..+-      -++.+..++..|+|||.+..
T Consensus        94 dllfaNAvlqWlpdH~~ll~rL~~~L~Pgg~LAV  127 (257)
T COG4106          94 DLLFANAVLQWLPDHPELLPRLVSQLAPGGVLAV  127 (257)
T ss_pred             chhhhhhhhhhccccHHHHHHHHHhhCCCceEEE
Confidence            88875432      25788899999999998754

>PLN02589 caffeoyl-CoA O-methyltransferase

Probab=92.32  E-value=4  Score=35.78  Aligned_cols=103  Identities=13%  Similarity=0.203  Sum_probs=66.1

Q ss_pred             CCCCCCEEEEEcCCHHHHHHHHHHHHCCC-CEEEEEecChhHHHHHH----HcCCCeEEecCCCcccHHHHHHHHHHHc-
Q 017916          178 NIGPETNVLIMGAGPIGLVTMLGARAFGA-PRIVIVDVDDYRLSVAK----ELGADNIVKVSTNLQDIAEEVEKIQKAM-  251 (364)
Q Consensus       178 ~~~~g~~VLI~Gag~~G~~ai~la~~~g~-~~vv~~~~~~~~~~~~~----~lg~~~~~~~~~~~~~~~~~i~~~~~~~-  251 (364)
                      +.....+||-.|. .+|..++.+|+.++. ..+++++.++++.+.++    +.|...-+.+.  ..+..+.+..+.... 
T Consensus        76 ~~~~ak~iLEiGT-~~GySal~la~al~~~g~v~tiE~~~~~~~~Ar~~~~~ag~~~~I~~~--~G~a~e~L~~l~~~~~  152 (247)
T PLN02589         76 KLINAKNTMEIGV-YTGYSLLATALALPEDGKILAMDINRENYELGLPVIQKAGVAHKIDFR--EGPALPVLDQMIEDGK  152 (247)
T ss_pred             HHhCCCEEEEEeC-hhhHHHHHHHhhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEE--eccHHHHHHHHHhccc
Confidence            3344568888885 458888889887642 27999999888776654    45643323321  134455555543321 


Q ss_pred             -CCCccEEE-ECCC--CHHHHHHHHHhcccCCEEEE
Q 017916          252 -GTGIDVSF-DCAG--FNKTMSTALSATRAGGKVCL  283 (364)
Q Consensus       252 -~~~~d~vi-d~~g--~~~~~~~~~~~l~~~G~~v~  283 (364)
                       .+.||+|| |+--  -.+.+..+++.|++||.++.
T Consensus       153 ~~~~fD~iFiDadK~~Y~~y~~~~l~ll~~GGviv~  188 (247)
T PLN02589        153 YHGTFDFIFVDADKDNYINYHKRLIDLVKVGGVIGY  188 (247)
T ss_pred             cCCcccEEEecCCHHHhHHHHHHHHHhcCCCeEEEE
Confidence             25799997 4322  13567788999999998775

>PLN02490 MPBQ/MSBQ methyltransferase

Probab=92.29  E-value=1.7  Score=40.11  Aligned_cols=103  Identities=21%  Similarity=0.310  Sum_probs=64.3

Q ss_pred             HHHcCC-CCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCC-CeEEecCCCcccHHHHHHHHHHHc
Q 017916          174 CRRANI-GPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGA-DNIVKVSTNLQDIAEEVEKIQKAM  251 (364)
Q Consensus       174 l~~~~~-~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~-~~~~~~~~~~~~~~~~i~~~~~~~  251 (364)
                      ++...+ .++++||-.|+|. |..+..+++..+...+++++.+++-.+.+++... ..+ .+  ...+..    ++. ..
T Consensus       105 l~~~~l~~~~~~VLDLGcGt-G~~~l~La~~~~~~~VtgVD~S~~mL~~A~~k~~~~~i-~~--i~gD~e----~lp-~~  175 (340)
T PLN02490        105 LEPADLSDRNLKVVDVGGGT-GFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKEC-KI--IEGDAE----DLP-FP  175 (340)
T ss_pred             HhhcccCCCCCEEEEEecCC-cHHHHHHHHHCCCCEEEEEECCHHHHHHHHHhhhccCC-eE--EeccHH----hCC-CC
Confidence            343443 4678999998755 6677788887755579999998887777665321 111 11  011211    110 01


Q ss_pred             CCCccEEEECCC------CHHHHHHHHHhcccCCEEEEEc
Q 017916          252 GTGIDVSFDCAG------FNKTMSTALSATRAGGKVCLVG  285 (364)
Q Consensus       252 ~~~~d~vid~~g------~~~~~~~~~~~l~~~G~~v~~g  285 (364)
                      .+.+|+|+.+..      ....++++.+.|+++|+++..+
T Consensus       176 ~~sFDvVIs~~~L~~~~d~~~~L~e~~rvLkPGG~LvIi~  215 (340)
T PLN02490        176 TDYADRYVSAGSIEYWPDPQRGIKEAYRVLKIGGKACLIG  215 (340)
T ss_pred             CCceeEEEEcChhhhCCCHHHHHHHHHHhcCCCcEEEEEE
Confidence            346899886421      1357788999999999998765

>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=92.29  E-value=1.7  Score=37.93  Aligned_cols=80  Identities=24%  Similarity=0.246  Sum_probs=45.7

Q ss_pred             CEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecCh-hH-HHHHH---HcCCC-eEEecCCC-cccHHHHHHHHHHHcCCC
Q 017916          183 TNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDD-YR-LSVAK---ELGAD-NIVKVSTN-LQDIAEEVEKIQKAMGTG  254 (364)
Q Consensus       183 ~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~-~~-~~~~~---~lg~~-~~~~~~~~-~~~~~~~i~~~~~~~~~~  254 (364)
                      .++||+|+ |.+|...+..+...|++ ++.++++. .+ .....   ..+.. ..+..+-. ..++.+.+..+.+. -++
T Consensus         3 k~vlItG~sg~iG~~la~~L~~~g~~-vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~~   80 (256)
T PRK12745          3 PVALVTGGRRGIGLGIARALAAAGFD-LAINDRPDDEELAATQQELRALGVEVIFFPADVADLSAHEAMLDAAQAA-WGR   80 (256)
T ss_pred             cEEEEeCCCchHHHHHHHHHHHCCCE-EEEEecCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHh-cCC
Confidence            47899998 99999999999889995 55555433 22 22222   22321 22222221 23333333333332 246


Q ss_pred             ccEEEECCCC
Q 017916          255 IDVSFDCAGF  264 (364)
Q Consensus       255 ~d~vid~~g~  264 (364)
                      +|++|.+.|.
T Consensus        81 id~vi~~ag~   90 (256)
T PRK12745         81 IDCLVNNAGV   90 (256)
T ss_pred             CCEEEECCcc
Confidence            9999998873

>PF07991 IlvN: Acetohydroxy acid isomeroreductase, catalytic domain; InterPro: IPR013116 Acetohydroxy acid isomeroreductase catalyses the conversion of acetohydroxy acids into dihydroxy valerates

Probab=92.29  E-value=2.9  Score=33.89  Aligned_cols=87  Identities=20%  Similarity=0.223  Sum_probs=53.6

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcCCCccEEEE
Q 017916          181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  260 (364)
Q Consensus       181 ~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid  260 (364)
                      .+.+|.|.|-|.-|.+-++=+|-.|.+++++........+.+++-|+..        .+..+.+        ...|+|+-
T Consensus         3 ~~k~IAViGyGsQG~a~AlNLrDSG~~V~Vglr~~s~s~~~A~~~Gf~v--------~~~~eAv--------~~aDvV~~   66 (165)
T PF07991_consen    3 KGKTIAVIGYGSQGHAHALNLRDSGVNVIVGLREGSASWEKAKADGFEV--------MSVAEAV--------KKADVVML   66 (165)
T ss_dssp             CTSEEEEES-SHHHHHHHHHHHHCC-EEEEEE-TTCHHHHHHHHTT-EC--------CEHHHHH--------HC-SEEEE
T ss_pred             CCCEEEEECCChHHHHHHHHHHhCCCCEEEEecCCCcCHHHHHHCCCee--------ccHHHHH--------hhCCEEEE
Confidence            4789999999888999999999999977777765555788888888752        1222222        35789888


Q ss_pred             CCCCHHHHHH-----HHHhcccCCEEEEE
Q 017916          261 CAGFNKTMST-----ALSATRAGGKVCLV  284 (364)
Q Consensus       261 ~~g~~~~~~~-----~~~~l~~~G~~v~~  284 (364)
                      .+. .+....     ....|+++-.+++.
T Consensus        67 L~P-D~~q~~vy~~~I~p~l~~G~~L~fa   94 (165)
T PF07991_consen   67 LLP-DEVQPEVYEEEIAPNLKPGATLVFA   94 (165)
T ss_dssp             -S--HHHHHHHHHHHHHHHS-TT-EEEES
T ss_pred             eCC-hHHHHHHHHHHHHhhCCCCCEEEeC
Confidence            776 333333     34567766666543

This reaction is the second in the synthetic pathway of the essential branched side chain amino acids valine and isoleucine.; GO: 0004455 ketol-acid reductoisomerase activity, 0008652 cellular amino acid biosynthetic process, 0055114 oxidation-reduction process; PDB: 1QMG_A 1YVE_J 3FR8_B 3FR7_A 1NP3_C 1YRL_C.

>PRK06940 short chain dehydrogenase; Provisional

Probab=92.24  E-value=1.7  Score=38.79  Aligned_cols=78  Identities=22%  Similarity=0.324  Sum_probs=45.5

Q ss_pred             CEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHH-HHHHc---CCC-eEEecCC-CcccHHHHHHHHHHHcCCCcc
Q 017916          183 TNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLS-VAKEL---GAD-NIVKVST-NLQDIAEEVEKIQKAMGTGID  256 (364)
Q Consensus       183 ~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~-~~~~l---g~~-~~~~~~~-~~~~~~~~i~~~~~~~~~~~d  256 (364)
                      .+++|+|+|++|.+.+..+. .|+ .|+.++++.++.+ ..+++   +.. ..+..|- ..+++.+.+..+ .. -+++|
T Consensus         3 k~~lItGa~gIG~~la~~l~-~G~-~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~i~~~~~~~-~~-~g~id   78 (275)
T PRK06940          3 EVVVVIGAGGIGQAIARRVG-AGK-KVLLADYNEENLEAAAKTLREAGFDVSTQEVDVSSRESVKALAATA-QT-LGPVT   78 (275)
T ss_pred             CEEEEECCChHHHHHHHHHh-CCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHH-Hh-cCCCC
Confidence            57888998899999888875 788 5666667665443 22222   322 1222222 122333333333 21 24799


Q ss_pred             EEEECCCC
Q 017916          257 VSFDCAGF  264 (364)
Q Consensus       257 ~vid~~g~  264 (364)
                      ++|+++|.
T Consensus        79 ~li~nAG~   86 (275)
T PRK06940         79 GLVHTAGV   86 (275)
T ss_pred             EEEECCCc
Confidence            99999874

>PRK06141 ornithine cyclodeaminase; Validated

Probab=92.21  E-value=5.3  Score=36.48  Aligned_cols=98  Identities=18%  Similarity=0.183  Sum_probs=60.3

Q ss_pred             HHcCCCCCCEEEEEcCCHHHHHHHHHHH-HCCCCEEEEEecChhHHH-HHHHc---CCCeEEecCCCcccHHHHHHHHHH
Q 017916          175 RRANIGPETNVLIMGAGPIGLVTMLGAR-AFGAPRIVIVDVDDYRLS-VAKEL---GADNIVKVSTNLQDIAEEVEKIQK  249 (364)
Q Consensus       175 ~~~~~~~g~~VLI~Gag~~G~~ai~la~-~~g~~~vv~~~~~~~~~~-~~~~l---g~~~~~~~~~~~~~~~~~i~~~~~  249 (364)
                      +...-....+|+|.|+|..|...+.... ..+.+.+.+..++.++.+ +++++   +.. +...    .+    +.+.. 
T Consensus       118 ~~La~~~~~~v~iiG~G~~a~~~~~al~~~~~~~~V~V~~Rs~~~a~~~a~~~~~~g~~-~~~~----~~----~~~av-  187 (314)
T PRK06141        118 SYLARKDASRLLVVGTGRLASLLALAHASVRPIKQVRVWGRDPAKAEALAAELRAQGFD-AEVV----TD----LEAAV-  187 (314)
T ss_pred             HHhCCCCCceEEEECCcHHHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHhcCCc-eEEe----CC----HHHHH-
Confidence            3333356789999999999988876444 467778889888887754 44444   321 1111    11    12111 


Q ss_pred             HcCCCccEEEECCCCHHHHHHHHHhcccCCEEEEEcC
Q 017916          250 AMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGM  286 (364)
Q Consensus       250 ~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~  286 (364)
                         .+.|+|+.|+.++..+ .-.+.++++-.+...|.
T Consensus       188 ---~~aDIVi~aT~s~~pv-l~~~~l~~g~~i~~ig~  220 (314)
T PRK06141        188 ---RQADIISCATLSTEPL-VRGEWLKPGTHLDLVGN  220 (314)
T ss_pred             ---hcCCEEEEeeCCCCCE-ecHHHcCCCCEEEeeCC
Confidence               4689999988865221 11256788776666664

>KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=92.21  E-value=1.4  Score=35.74  Aligned_cols=83  Identities=24%  Similarity=0.353  Sum_probs=54.5

Q ss_pred             CCCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEec-ChhHHHHHHHcCCCeEEec-C-CCcccHHHHHHHHHHHcCCCc
Q 017916          180 GPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDV-DDYRLSVAKELGADNIVKV-S-TNLQDIAEEVEKIQKAMGTGI  255 (364)
Q Consensus       180 ~~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~-~~~~~~~~~~lg~~~~~~~-~-~~~~~~~~~i~~~~~~~~~~~  255 (364)
                      .+|-.-||+|+ +++|.+++..+...|++ ++..+. +....+.++++|-.-++.- + .+.+|....+..... .-+.+
T Consensus         7 ~kglvalvtggasglg~ataerlakqgas-v~lldlp~skg~~vakelg~~~vf~padvtsekdv~aala~ak~-kfgrl   84 (260)
T KOG1199|consen    7 TKGLVALVTGGASGLGKATAERLAKQGAS-VALLDLPQSKGADVAKELGGKVVFTPADVTSEKDVRAALAKAKA-KFGRL   84 (260)
T ss_pred             hcCeeEEeecCcccccHHHHHHHHhcCce-EEEEeCCcccchHHHHHhCCceEEeccccCcHHHHHHHHHHHHh-hccce
Confidence            35666788865 99999999999999996 455554 4456788899997544321 1 223444443333322 13468


Q ss_pred             cEEEECCCC
Q 017916          256 DVSFDCAGF  264 (364)
Q Consensus       256 d~vid~~g~  264 (364)
                      |+.++|.|.
T Consensus        85 d~~vncagi   93 (260)
T KOG1199|consen   85 DALVNCAGI   93 (260)
T ss_pred             eeeeeccce
Confidence            999999984

>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]

Probab=92.20  E-value=4.4  Score=36.46  Aligned_cols=108  Identities=18%  Similarity=0.153  Sum_probs=62.9

Q ss_pred             CCCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHc--CCCeEEecC-CCcccHHHHHHHHHHHc-CCC
Q 017916          180 GPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKEL--GADNIVKVS-TNLQDIAEEVEKIQKAM-GTG  254 (364)
Q Consensus       180 ~~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~l--g~~~~~~~~-~~~~~~~~~i~~~~~~~-~~~  254 (364)
                      ..+..|||+|+ ++.|...+.-+...|+.+++++-.++...++..+.  +--..+..| ..+++..+..+-..+.. ..+
T Consensus        27 ~~~k~VlITGCDSGfG~~LA~~L~~~Gf~V~Agcl~~~gae~L~~~~~s~rl~t~~LDVT~~esi~~a~~~V~~~l~~~g  106 (322)
T KOG1610|consen   27 LSDKAVLITGCDSGFGRLLAKKLDKKGFRVFAGCLTEEGAESLRGETKSPRLRTLQLDVTKPESVKEAAQWVKKHLGEDG  106 (322)
T ss_pred             cCCcEEEEecCCcHHHHHHHHHHHhcCCEEEEEeecCchHHHHhhhhcCCcceeEeeccCCHHHHHHHHHHHHHhccccc
Confidence            45567999998 99999999999999997777663333323333333  111122222 22334443333333322 345


Q ss_pred             ccEEEECCCCH--------------------------HHHHHHHHhccc-CCEEEEEcCC
Q 017916          255 IDVSFDCAGFN--------------------------KTMSTALSATRA-GGKVCLVGMG  287 (364)
Q Consensus       255 ~d~vid~~g~~--------------------------~~~~~~~~~l~~-~G~~v~~g~~  287 (364)
                      .--+++++|..                          +.....+..+++ .||++.++..
T Consensus       107 LwglVNNAGi~~~~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr~arGRvVnvsS~  166 (322)
T KOG1610|consen  107 LWGLVNNAGISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLRRARGRVVNVSSV  166 (322)
T ss_pred             ceeEEeccccccccCccccccHHHHHHHHhhhhhhHHHHHHHHHHHHHhccCeEEEeccc
Confidence            77788888721                          233445556654 5999988743

>KOG1252 consensus Cystathionine beta-synthase and related enzymes [Amino acid transport and metabolism]

Probab=92.19  E-value=0.72  Score=41.59  Aligned_cols=57  Identities=23%  Similarity=0.302  Sum_probs=46.3

Q ss_pred             HHcCCCCCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEe--cChhHHHHHHHcCCCeEE
Q 017916          175 RRANIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVD--VDDYRLSVAKELGADNIV  231 (364)
Q Consensus       175 ~~~~~~~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~--~~~~~~~~~~~lg~~~~~  231 (364)
                      ....+.||.++||-.. |.+|...+-.+...|++.+++.-  .+.+|...++.||+..+.
T Consensus        96 ~~G~i~pg~stliEpTSGNtGigLA~~~a~~Gyk~i~tmP~~ms~Ek~~~l~a~Gaeii~  155 (362)
T KOG1252|consen   96 KKGLITPGKSTLIEPTSGNTGIGLAYMAALRGYKCIITMPEKMSKEKRILLRALGAEIIL  155 (362)
T ss_pred             HcCCccCCceEEEecCCCchHHHHHHHHHHcCceEEEEechhhhHHHHHHHHHcCCEEEe
Confidence            4478999999999876 99999999999999996555542  266889999999987544

>PLN00203 glutamyl-tRNA reductase

Probab=92.13  E-value=1.1  Score=43.77  Aligned_cols=74  Identities=22%  Similarity=0.359  Sum_probs=50.4

Q ss_pred             CCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHH-HHcCCCeEEecCCCcccHHHHHHHHHHHcCCCccEEEE
Q 017916          182 ETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  260 (364)
Q Consensus       182 g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~-~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid  260 (364)
                      +.+|+|.|+|.+|.++++.+...|+..++++.++.++.+.+ ..++-..+ .+    ..+.+ +...    -.+.|+||.
T Consensus       266 ~kkVlVIGAG~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~~~g~~i-~~----~~~~d-l~~a----l~~aDVVIs  335 (519)
T PLN00203        266 SARVLVIGAGKMGKLLVKHLVSKGCTKMVVVNRSEERVAALREEFPDVEI-IY----KPLDE-MLAC----AAEADVVFT  335 (519)
T ss_pred             CCEEEEEeCHHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHhCCCce-Ee----ecHhh-HHHH----HhcCCEEEE
Confidence            68999999999999999999999987788888888776544 44532111 11    01111 1111    146899999


Q ss_pred             CCCCH
Q 017916          261 CAGFN  265 (364)
Q Consensus       261 ~~g~~  265 (364)
                      |++++
T Consensus       336 AT~s~  340 (519)
T PLN00203        336 STSSE  340 (519)
T ss_pred             ccCCC
Confidence            98764

>TIGR00452 methyltransferase, putative

Probab=92.11  E-value=2.2  Score=38.93  Aligned_cols=100  Identities=16%  Similarity=0.162  Sum_probs=60.1

Q ss_pred             HHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHH---HHHHc-CCCeEEecCCCcccHHHHHHHHHHH
Q 017916          175 RRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLS---VAKEL-GADNIVKVSTNLQDIAEEVEKIQKA  250 (364)
Q Consensus       175 ~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~---~~~~l-g~~~~~~~~~~~~~~~~~i~~~~~~  250 (364)
                      ......+|++||-.|+|. |..+..+++ .|+..|++++.+..-..   .++.+ +...-+.+..  .+    +.++.. 
T Consensus       115 ~~l~~~~g~~VLDvGCG~-G~~~~~~~~-~g~~~v~GiDpS~~ml~q~~~~~~~~~~~~~v~~~~--~~----ie~lp~-  185 (314)
T TIGR00452       115 PHLSPLKGRTILDVGCGS-GYHMWRMLG-HGAKSLVGIDPTVLFLCQFEAVRKLLDNDKRAILEP--LG----IEQLHE-  185 (314)
T ss_pred             HhcCCCCCCEEEEeccCC-cHHHHHHHH-cCCCEEEEEcCCHHHHHHHHHHHHHhccCCCeEEEE--CC----HHHCCC-
Confidence            445667789999998765 666666654 47767999998875433   23332 2111111100  11    111211 


Q ss_pred             cCCCccEEEECC-----CC-HHHHHHHHHhcccCCEEEEE
Q 017916          251 MGTGIDVSFDCA-----GF-NKTMSTALSATRAGGKVCLV  284 (364)
Q Consensus       251 ~~~~~d~vid~~-----g~-~~~~~~~~~~l~~~G~~v~~  284 (364)
                       ...||+|+...     .+ .+.+.++.++|++||+++..
T Consensus       186 -~~~FD~V~s~gvL~H~~dp~~~L~el~r~LkpGG~Lvle  224 (314)
T TIGR00452       186 -LYAFDTVFSMGVLYHRKSPLEHLKQLKHQLVIKGELVLE  224 (314)
T ss_pred             -CCCcCEEEEcchhhccCCHHHHHHHHHHhcCCCCEEEEE
Confidence             23699998632     12 36888999999999999864

Known examples to date are restricted to the proteobacteria.

>PRK07069 short chain dehydrogenase; Validated

Probab=92.10  E-value=1.4  Score=38.30  Aligned_cols=78  Identities=22%  Similarity=0.325  Sum_probs=45.2

Q ss_pred             EEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecC-hhHHHH-HHHcC----CCeE--E--ecCCCcccHHHHHHHHHHHcC
Q 017916          184 NVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVD-DYRLSV-AKELG----ADNI--V--KVSTNLQDIAEEVEKIQKAMG  252 (364)
Q Consensus       184 ~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~-~~~~~~-~~~lg----~~~~--~--~~~~~~~~~~~~i~~~~~~~~  252 (364)
                      ++||+|+ |.+|...++.+...|+ .|+.++++ .++.+. .+++.    ...+  +  |.. ..+++.+.+....+. -
T Consensus         1 ~ilVtG~~~~iG~~~a~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~-~~~~~~~~~~~~~~~-~   77 (251)
T PRK07069          1 RAFITGAAGGLGRAIARRMAEQGA-KVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVT-DEAQWQALLAQAADA-M   77 (251)
T ss_pred             CEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHHHHhcCCCceEEEEEeecC-CHHHHHHHHHHHHHH-c
Confidence            3789987 9999999988888899 56666655 443332 22221    1111  1  221 223333333333322 2


Q ss_pred             CCccEEEECCCC
Q 017916          253 TGIDVSFDCAGF  264 (364)
Q Consensus       253 ~~~d~vid~~g~  264 (364)
                      +++|++|.++|.
T Consensus        78 ~~id~vi~~ag~   89 (251)
T PRK07069         78 GGLSVLVNNAGV   89 (251)
T ss_pred             CCccEEEECCCc
Confidence            469999999873

>PRK07411 hypothetical protein; Validated

Probab=92.07  E-value=1.5  Score=41.28  Aligned_cols=33  Identities=39%  Similarity=0.502  Sum_probs=29.6

Q ss_pred             CCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEec
Q 017916          182 ETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDV  214 (364)
Q Consensus       182 g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~  214 (364)
                      ..+|||.|+|++|..+++.+.+.|...+..+|.
T Consensus        38 ~~~VlivG~GGlG~~va~~La~~Gvg~l~lvD~   70 (390)
T PRK07411         38 AASVLCIGTGGLGSPLLLYLAAAGIGRIGIVDF   70 (390)
T ss_pred             cCcEEEECCCHHHHHHHHHHHHcCCCEEEEECC
Confidence            468999999999999999999999998888864

>TIGR00308 TRM1 tRNA(guanine-26,N2-N2) methyltransferase

Probab=92.03  E-value=2.6  Score=39.43  Aligned_cols=92  Identities=18%  Similarity=0.222  Sum_probs=63.4

Q ss_pred             EEcC-CHHHHHHHHHHHHC-CCCEEEEEecChhHHHHHHH----cCCCeEEecCCCcccHHHHHHHHHHHcCCCccEE-E
Q 017916          187 IMGA-GPIGLVTMLGARAF-GAPRIVIVDVDDYRLSVAKE----LGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVS-F  259 (364)
Q Consensus       187 I~Ga-g~~G~~ai~la~~~-g~~~vv~~~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~v-i  259 (364)
                      |.-+ +++|..++.+++.. |++.|+.++.+++..+.+++    .+...+..+.   .|....+..    .+..+|+| +
T Consensus        48 vLD~faGsG~rgir~a~e~~ga~~Vv~nD~n~~Av~~i~~N~~~N~~~~~~v~~---~Da~~~l~~----~~~~fDvIdl  120 (374)
T TIGR00308        48 IADALSASGIRAIRYAHEIEGVREVFANDINPKAVESIKNNVEYNSVENIEVPN---EDAANVLRY----RNRKFHVIDI  120 (374)
T ss_pred             EEECCCchhHHHHHHHhhCCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEc---hhHHHHHHH----hCCCCCEEEe
Confidence            4444 66788899999875 88899999999988777654    3443222221   233332222    24579998 7


Q ss_pred             ECCCCH-HHHHHHHHhcccCCEEEEEc
Q 017916          260 DCAGFN-KTMSTALSATRAGGKVCLVG  285 (364)
Q Consensus       260 d~~g~~-~~~~~~~~~l~~~G~~v~~g  285 (364)
                      |..|++ +.+..+++.++++|.+....
T Consensus       121 DPfGs~~~fld~al~~~~~~glL~vTa  147 (374)
T TIGR00308       121 DPFGTPAPFVDSAIQASAERGLLLVTA  147 (374)
T ss_pred             CCCCCcHHHHHHHHHhcccCCEEEEEe
Confidence            999874 77788999999999887764

This enzyme is responsible for two methylations of a characteristic guanine of most tRNA molecules. The activity has been demonstrated for eukaryotic and archaeal proteins, which are active when expressed in E. coli, a species that lacks this enzyme. At least one Eubacterium, Aquifex aeolicus, has an ortholog, as do all completed archaeal genomes.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	364
1e3j_A	352	Ketose Reductase (Sorbitol Dehydrogenase) From Silv		5e-91
1pl7_A	356	Human Sorbitol Dehydrogenase (Apo) Length = 356		4e-90
3qe3_A	355	Sheep Liver Sorbitol Dehydrogenase Length = 355		5e-90
1pl6_A	356	Human SdhNADHINHIBITOR COMPLEX Length = 356		7e-88
3m6i_A	363	L-Arabinitol 4-Dehydrogenase Length = 363		1e-61
2dfv_A	347	Hyperthermophilic Threonine Dehydrogenase From Pyro		1e-41
2d8a_A	348	Crystal Structure Of Ph0655 From Pyrococcus Horikos		1e-41
3gfb_A	350	L-Threonine Dehydrogenase (Tktdh) From The Hyperthe		2e-40
4ej6_A	370	Crystal Structure Of A Putative Zinc-Binding Dehydr		3e-39
2dq4_A	343	Crystal Structure Of Threonine 3-Dehydrogenase Leng		3e-38
4a2c_A	346	Crystal Structure Of Galactitol-1-Phosphate Dehydro		1e-32
1rjw_A	339	Crystal Structure Of Nad(+)-Dependent Alcohol Dehyd		2e-30
3pii_A	339	Crystal Structure Of Mutant Of Ht- Alcohol Dehydrog		3e-30
4ilk_A	359	Crystal Structure Of Short Chain Alcohol Dehydrogen		1e-29
2eih_A	343	Crystal Structure Of Nad-Dependent Alcohol Dehydrog		2e-25
2eer_A	347	Structural Study Of Project Id St2577 From Sulfolob		3e-25
1e3l_A	376	P47h Mutant Of Mouse Class Ii Alcohol Dehydrogenase		7e-25
1ee2_B	373	The Structure Of Steroid-Active Alcohol Dehydrogena		8e-25
1ee2_A	373	The Structure Of Steroid-Active Alcohol Dehydrogena		8e-25
1e3e_A	376	Mouse Class Ii Alcohol Dehydrogenase Complex With N		8e-25
1mgo_A	374	Horse Liver Alcohol Dehydrogenase Phe93ala Mutant L		2e-24
1hdz_A	374	Three-Dimensional Structures Of Three Human Alcohol		2e-24
1axe_A	374	Crystal Structure Of The Active-Site Mutant Phe93->		3e-24
6adh_A	374	Structure Of Triclinic Ternary Complex Of Horse Liv		3e-24
3fpl_A	351	Chimera Of Alcohol Dehydrogenase By Exchange Of The		4e-24
2nvb_A	352	Contribution Of Pro275 To The Thermostability Of Th		4e-24
3oq6_A	374	Horse Liver Alcohol Dehydrogenase A317c Mutant Comp		4e-24
1ykf_A	352	Nadp-Dependent Alcohol Dehydrogenase From Thermoana		4e-24
1qv6_A	374	Horse Liver Alcohol Dehydrogenase His51glnLYS228ARG		7e-24
1a71_A	374	Ternary Complex Of An Active Site Double Mutant Of		7e-24
1n8k_A	374	Horse Liver Alcohol Dehydrogenase Val292thr Mutant		8e-24
1axg_A	374	Crystal Structure Of The Val203->ala Mutant Of Live		9e-24
1qlh_A	374	Horse Liver Alcohol Dehydrogenase Complexed To Nad		1e-23
1htb_A	374	Crystallization Of Human Beta3 Alcohol Dehydrogenas		1e-23
1hso_A	374	Human Alpha Alcohol Dehydrogenase (Adh1a) Length =		1e-23
1ju9_A	374	Horse Liver Alcohol Dehydrogenase Val292ser Mutant		1e-23
4eez_A	348	Crystal Structure Of Lactococcus Lactis Alcohol Deh		1e-23
1hdx_A	374	Three-Dimensional Structures Of Three Human Alcohol		1e-23
1hdy_A	374	Three-Dimensional Structures Of Three Human Alcohol		1e-23
1ht0_A	374	Human Gamma-2 Alcohol Dehydrogense Length = 374		2e-23
4eex_A	348	Crystal Structure Of Lactococcus Lactis Alcohol Deh		3e-23
3fpc_A	352	Chimera Of Alcohol Dehydrogenase By Exchange Of The		3e-23
2xaa_A	345	Alcohol Dehydrogenase Adh-'a' From Rhodococcus Rube		4e-23
1llu_A	342	The Ternary Complex Of Pseudomonas Aeruginosa Alcoh		6e-23
1ped_A	351	Bacterial Secondary Alcohol Dehydrogenase (Apo-Form		1e-22
2b83_A	351	A Single Amino Acid Substitution In The Clostridium		2e-22
3fsr_A	352	Chimera Of Alcohol Dehydrogenase By Exchange Of The		2e-22
3cos_A	381	Crystal Structure Of Human Class Ii Alcohol Dehydro		3e-22
1y9a_A	360	Alcohol Dehydrogenase From Entamoeba Histolotica In		5e-22
3meq_A	365	Crystal Structure Of Alcohol Dehydrogenase From Bru		6e-22
3ftn_A	352	Q165eS254K DOUBLE MUTANT CHIMERA OF ALCOHOL DEHYDRO		8e-22
2oui_A	360	D275p Mutant Of Alcohol Dehydrogenase From Protozoa		9e-22
1jqb_A	351	Alcohol Dehydrogenase From Clostridium Beijerinckii		1e-21
3s1l_A	340	Crystal Structure Of Apo-Form Furx Length = 340		7e-21
1h2b_A	359	Crystal Structure Of The Alcohol Dehydrogenase From		9e-21
1vj0_A	380	Crystal Structure Of Alcohol Dehydrogenase (Tm0436)		1e-20
1r37_A	347	Alcohol Dehydrogenase From Sulfolobus Solfataricus		1e-20
1nto_A	347	N249y Mutant Of Alcohol Dehydrogenase From The Arch		3e-20
3i4c_A	347	Crystal Structure Of Sulfolobus Solfataricus Adh(Ss		5e-20
1jvb_A	347	Alcohol Dehydrogenase From The Archaeon Sulfolobus		6e-19
1f8f_A	371	Crystal Structure Of Benzyl Alcohol Dehydrogenase F		7e-19
3uko_A	378	Crystal Structure Of S-Nitrosoglutathione Reductase		9e-19
3qj5_A	374	S-Nitrosoglutathione Reductase (Gsnor) In Complex W		9e-19
1teh_A	373	Structure Of Human Liver Chichi Alcohol Dehydrogena		9e-19
1mc5_A	374	Ternary Complex Of Human Glutathione-Dependent Form		1e-18
3ip1_A	404	Structure Of Putative Alcohol Dehydrogenase (Tm_042		1e-18
1p0c_A	373	Crystal Structure Of The Nadp(H)-Dependent Vertebra		5e-18
2fzw_A	373	Structure Of The Binary Complex Of The E67l Mutant		8e-18
4dl9_A	396	Crystal Structure Of S-nitrosoglutathione Reductase		9e-18
1cdo_A	374	Alcohol Dehydrogenase (E.C.1.1.1.1) (Ee Isozyme) Co		1e-17
1agn_A	373	X-Ray Structure Of Human Sigma Alcohol Dehydrogenas		2e-17
1d1t_A	373	Mutant Of Human Sigma Alcohol Dehydrogenase With Le		2e-17
2dph_A	398	Crystal Structure Of Formaldehyde Dismutase Length		2e-15
1yqd_A	366	Sinapyl Alcohol Dehydrogenase Complexed With Nadp+		1e-14
1kol_A	398	Crystal Structure Of Formaldehyde Dehydrogenase Len		9e-13
2h6e_A	344	Crystal Structure Of The D-Arabinose Dehydrogenase		5e-12
1wly_A	333	Crystal Structure Of 2-haloacrylate Reductase Lengt		4e-11
3uog_A	363	Crystal Structure Of Putative Alcohol Dehydrogenase		8e-11
3two_A	348	The Crystal Structure Of Cad From Helicobacter Pylo		1e-10
3jyl_A	325	Crystal Structures Of Pseudomonas Syringae Pv. Toma		9e-10
2hcy_A	347	Yeast Alcohol Dehydrogenase I, Saccharomyces Cerevi		1e-09
3qwa_A	334	Crystal Structure Of Saccharomyces Cerevisiae Zeta-		5e-09
1ps0_A	360	Crystal Structure Of The Nadp(H)-Dependent Cinnamyl		2e-08
1uuf_A	369	Crystal Structure Of A Zinc-Type Alcohol Dehydrogen		2e-08
3goh_A	315	Crystal Structure Of Alcohol Dehydrogenase Superfam		2e-07
3fbg_A	346	Crystal Structure Of A Putative Arginate Lyase From		2e-07
3krt_A	456	Crystal Structure Of Putative Crotonyl Coa Reductas		1e-06
2b5w_A	357	Crystal Structure Of D38c Glucose Dehydrogenase Mut		5e-06
4a27_A	349	Crystal Structure Of Human Synaptic Vesicle Membran		5e-06
1yb5_A	351	Crystal Structure Of Human Zeta-crystallin With Bou		6e-06
2b5v_A	357	Crystal Structure Of Glucose Dehydrogenase From Hal		9e-05
2cd9_A	366	Sulfolobus Solfataricus Glucose Dehydrogenase 1 - A		6e-04
1qor_A	327	Crystal Structure Of Escherichia Coli Quinone Oxido		6e-04
2cdb_A	366	Sulfolobus Solfataricus Glucose Dehydrogenase 1 In		6e-04

>pdb|1E3J|A Chain A, Ketose Reductase (Sorbitol Dehydrogenase) From Silverleaf Whitefly Length = 352

Iteration: 1
 Score =  331 bits (848), Expect = 5e-91,   Method: Compositional matrix adjust.
 Identities = 172/347 (49%), Positives = 231/347 (66%), Gaps = 4/347 (1%)
Query: 18  NMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVI 77
           N++A L   N L+++   +P     +VL++M  VGICGSDVHY +  R ADF+VK+PMVI
Sbjct: 5   NLSAVLYKQNDLRLEQRPIPEPKEDEVLLQMAYVGICGSDVHYYEHGRIADFIVKDPMVI 64
Query: 78  GHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGS 137
           GHE +G + KVG  VK L  GDRVA+EPG+ C RC  CK G+YNLCP++ F ATPP  G+
Sbjct: 65  GHEASGTVVKVGKNVKHLKKGDRVAVEPGVPCRRCQFCKEGKYNLCPDLTFCATPPDDGN 124
Query: 138 LANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVT 197
           LA   VH AD C KLPDNVSLEEGA+ EPLSVG+HACRRA +   T VL++GAGPIGLV+
Sbjct: 125 LARYYVHAADFCHKLPDNVSLEEGALLEPLSVGVHACRRAGVQLGTTVLVIGAGPIGLVS 184
Query: 198 MLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDV 257
           +L A+A+GA  +V       RL VAK  GAD  + V    ++ +  +E+I+ A+G   +V
Sbjct: 185 VLAAKAYGA-FVVCTARSPRRLEVAKNCGADVTLVVDPAKEEESSIIERIRSAIGDLPNV 243
Query: 258 SFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKNTWPL 317
           + DC+G  K ++  ++ TR GG + LVGMG   +TVPL  A  RE+D+  VFRY N +P+
Sbjct: 244 TIDCSGNEKCITIGINITRTGGTLMLVGMGSQMVTVPLVNACAREIDIKSVFRYCNDYPI 303
Query: 318 CLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETS-ARGGTAIKVMFN 363
            LE++ SG+ +VK LVTH F   Q    +AFE +  +    IKVM +
Sbjct: 304 ALEMVASGRCNVKQLVTHSFKLEQ--TVDAFEAARKKADNTIKVMIS 348

>pdb|1PL7|A Chain A, Human Sorbitol Dehydrogenase (Apo) Length = 356

Iteration: 1
 Score =  328 bits (840), Expect = 4e-90,   Method: Compositional matrix adjust.
 Identities = 170/347 (48%), Positives = 235/347 (67%), Gaps = 7/347 (2%)
Query: 18  NMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVI 77
           N++  + G   L+++ + +P  GP +VL+RM +VGICGSDVHY +  R  +F+VK+PMV+
Sbjct: 8   NLSLVVHGPGDLRLENYPIPEPGPNEVLLRMHSVGICGSDVHYWEYGRIGNFIVKKPMVL 67
Query: 78  GHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGS 137
           GHE +G +EKVGS VK L PGDRVA+EPG      + CK GRYNL P + F ATPP  G+
Sbjct: 68  GHEASGTVEKVGSSVKHLKPGDRVAIEPGAPRENDEFCKMGRYNLSPSIFFCATPPDDGN 127
Query: 138 LANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVT 197
           L     H A  C+KLPDNV+ EEGA+ EPLSVG+HACRR  +     VL+ GAGPIG+VT
Sbjct: 128 LCRFYKHNAAFCYKLPDNVTFEEGALIEPLSVGIHACRRGGVTLGHKVLVCGAGPIGMVT 187
Query: 198 MLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVST-NLQDIAEEVEKIQKAMGTGID 256
           +L A+A GA ++V+ D+   RLS AKE+GAD ++++S  + Q+IA +VE     +G   +
Sbjct: 188 LLVAKAMGAAQVVVTDLSATRLSKAKEIGADLVLQISKESPQEIARKVE---GQLGCKPE 244
Query: 257 VSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKNTWP 316
           V+ +C G   ++   + ATR+GG + LVG+G    TVPL  AA+REVD+ GVFRY NTWP
Sbjct: 245 VTIECTGAEASIQAGIYATRSGGTLVLVGLGSEMTTVPLLHAAIREVDIKGVFRYCNTWP 304
Query: 317 LCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFN 363
           + + +L S  ++VKPLVTHRF    ++  EAFET  + G  +K+M  
Sbjct: 305 VAISMLASKSVNVKPLVTHRFPL--EKALEAFETFKK-GLGLKIMLK 348

>pdb|3QE3|A Chain A, Sheep Liver Sorbitol Dehydrogenase Length = 355

Iteration: 1
 Score =  327 bits (839), Expect = 5e-90,   Method: Compositional matrix adjust.
 Identities = 169/346 (48%), Positives = 237/346 (68%), Gaps = 7/346 (2%)
Query: 18  NMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVI 77
           N++  + G   L+++ + +P  GP +VL++M +VGICGSDVHY +  R  DFVVK+PMV+
Sbjct: 7   NLSLVVHGPGDLRLENYPIPEPGPNEVLLKMHSVGICGSDVHYWQHGRIGDFVVKKPMVL 66
Query: 78  GHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGS 137
           GHE +G + KVGS V+ L PGDRVA++PG      + CK GRYNL P + F ATPP  G+
Sbjct: 67  GHEASGTVVKVGSLVRHLQPGDRVAIQPGAPRQTDEFCKIGRYNLSPTIFFCATPPDDGN 126
Query: 138 LANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVT 197
           L     H A+ C+KLPDNV+ EEGA+ EPLSVG+HACRRA +     VL+ GAGPIGLV 
Sbjct: 127 LCRFYKHNANFCYKLPDNVTFEEGALIEPLSVGIHACRRAGVTLGNKVLVCGAGPIGLVN 186
Query: 198 MLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVST-NLQDIAEEVEKIQKAMGTGID 256
           +L A+A GA ++V+ D+   RLS AKE+GAD I+++S  + ++IA++VE +   +G+  +
Sbjct: 187 LLAAKAMGAAQVVVTDLSASRLSKAKEVGADFILEISNESPEEIAKKVEGL---LGSKPE 243
Query: 257 VSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKNTWP 316
           V+ +C G   ++   + AT +GG + LVG+G    +VPL  AA REVD+ GVFRY NTWP
Sbjct: 244 VTIECTGVETSIQAGIYATHSGGTLVLVGLGSEMTSVPLVHAATREVDIKGVFRYCNTWP 303
Query: 317 LCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMF 362
           + + +L S  ++VKPLVTHRF    ++  EAFETS + G  +KVM 
Sbjct: 304 MAISMLASKSVNVKPLVTHRFPL--EKALEAFETSKK-GLGLKVMI 346

>pdb|1PL6|A Chain A, Human SdhNADHINHIBITOR COMPLEX Length = 356

Iteration: 1
 Score =  320 bits (821), Expect = 7e-88,   Method: Compositional matrix adjust.
 Identities = 166/338 (49%), Positives = 227/338 (67%), Gaps = 6/338 (1%)
Query: 18  NMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVI 77
           N++  + G   L+++ + +P  GP +VL+R  +VGICGSDVHY +  R  +F+VK+P V+
Sbjct: 8   NLSLVVHGPGDLRLENYPIPEPGPNEVLLRXHSVGICGSDVHYWEYGRIGNFIVKKPXVL 67
Query: 78  GHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGS 137
           GHE +G +EKVGS VK L PGDRVA+EPG      + CK GRYNL P + F ATPP  G+
Sbjct: 68  GHEASGTVEKVGSSVKHLKPGDRVAIEPGAPRENDEFCKXGRYNLSPSIFFCATPPDDGN 127
Query: 138 LANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVT 197
           L     H A  C+KLPDNV+ EEGA+ EPLSVG+HACRR  +     VL+ GAGPIG VT
Sbjct: 128 LCRFYKHNAAFCYKLPDNVTFEEGALIEPLSVGIHACRRGGVTLGHKVLVCGAGPIGXVT 187
Query: 198 MLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVST-NLQDIAEEVEKIQKAMGTGID 256
           +L A+A GA ++V+ D+   RLS AKE+GAD ++++S  + Q+IA +VE     +G   +
Sbjct: 188 LLVAKAXGAAQVVVTDLSATRLSKAKEIGADLVLQISKESPQEIARKVE---GQLGCKPE 244
Query: 257 VSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKNTWP 316
           V+ +C G   ++   + ATR+GG + LVG+G    TVPL  AA+REVD+ GVFRY NTWP
Sbjct: 245 VTIECTGAEASIQAGIYATRSGGTLVLVGLGSEXTTVPLLHAAIREVDIKGVFRYCNTWP 304
Query: 317 LCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARG 354
           + +  L S  ++VKPLVTHRF    ++  EAFET  +G
Sbjct: 305 VAISXLASKSVNVKPLVTHRFPL--EKALEAFETFKKG 340

>pdb|3M6I|A Chain A, L-Arabinitol 4-Dehydrogenase Length = 363

Iteration: 1
 Score =  233 bits (594), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 139/324 (42%), Positives = 197/324 (60%), Gaps = 8/324 (2%)
Query: 43  DVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVA 102
           +V V +++ GICGSDVH+ K       +V+   V+GHE AG +  V   VK++  GDRVA
Sbjct: 42  EVTVAVRSTGICGSDVHFWKHGCIGPMIVECDHVLGHESAGEVIAVHPSVKSIKVGDRVA 101
Query: 103 LEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGA 162
           +EP + C  C+ C  GRYN C  + F +TPPV G L   V HPA  C K+  N+S E GA
Sbjct: 102 IEPQVICNACEPCLTGRYNGCERVDFLSTPPVPGLLRRYVNHPAVWCHKI-GNMSYENGA 160
Query: 163 MCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA 222
           M EPLSV L   +RA +     VLI GAGPIGL+TML A+A GA  +VI D+D+ RL  A
Sbjct: 161 MLEPLSVALAGLQRAGVRLGDPVLICGAGPIGLITMLCAKAAGACPLVITDIDEGRLKFA 220
Query: 223 KELGADNIVKVSTNLQDIAEEVEKIQKAMGTGID--VSFDCAGFNKTMSTALSATRAGGK 280
           KE+  + +      L    E  +KI ++ G GI+  V+ +C G   +++ A+ A + GGK
Sbjct: 221 KEICPEVVTHKVERL-SAEESAKKIVESFG-GIEPAVALECTGVESSIAAAIWAVKFGGK 278
Query: 281 VCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFS 340
           V ++G+G +E+ +P   A+VREVD+   +RY NTWP  + L+ +G +D+  LVTHRF   
Sbjct: 279 VFVIGVGKNEIQIPFMRASVREVDLQFQYRYCNTWPRAIRLVENGLVDLTRLVTHRFPL- 337
Query: 341 QKEVEEAFETSARGGT-AIKVMFN 363
            ++  +AFET++   T AIKV   
Sbjct: 338 -EDALKAFETASDPKTGAIKVQIQ 360

>pdb|2DFV|A Chain A, Hyperthermophilic Threonine Dehydrogenase From Pyrococcus Horikoshii Length = 347

Iteration: 1
 Score =  166 bits (421), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 107/334 (32%), Positives = 180/334 (53%), Gaps = 13/334 (3%)
Query: 35  ELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT 94
           ++P  GP +VL+++ A  ICG+D+H  +    A   +K P + GHE AG + ++G  V+ 
Sbjct: 22  DVPKPGPGEVLIKVLATSICGTDLHIYEWNEWAQSRIKPPQIXGHEVAGEVVEIGPGVEG 81
Query: 95  LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPD 154
           +  GD V++E  I C +C  C+ G+Y++C   K F      G  A   V PA   +K P 
Sbjct: 82  IEVGDYVSVETHIVCGKCYACRRGQYHVCQNTKIFGV-DTDGVFAEYAVVPAQNIWKNPK 140
Query: 155 NVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDV 214
           ++  E   + EPL   +       I  ++ VLI GAGP+GL+ +  A+A GA  +++ + 
Sbjct: 141 SIPPEYATLQEPLGNAVDTVLAGPISGKS-VLITGAGPLGLLGIAVAKASGAYPVIVSEP 199
Query: 215 DDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSA 274
            D+R  +AK++GAD +  ++   +D+ +EV  I    G G+DV  + +G  K +   L A
Sbjct: 200 SDFRRELAKKVGADYV--INPFEEDVVKEVXDITD--GNGVDVFLEFSGAPKALEQGLQA 255
Query: 275 TRAGGKVCLVGMGHHEMTVPLTPAAV-REVDVVGVF--RYKNTWPLCLELLRSGKIDVKP 331
               G+V L+G+   ++T+      + + + + G+       TW     LL+SGK+++ P
Sbjct: 256 VTPAGRVSLLGLYPGKVTIDFNNLIIFKALTIYGITGRHLWETWYTVSRLLQSGKLNLDP 315
Query: 332 LVTHRF-GFSQKEVEEAFETSARGGTAIKVMFNL 364
           ++TH++ GF +   EEAFE   R G   KV+F L
Sbjct: 316 IITHKYKGFDK--YEEAFEL-XRAGKTGKVVFXL 346

>pdb|2D8A|A Chain A, Crystal Structure Of Ph0655 From Pyrococcus Horikoshii Ot3 Length = 348

Iteration: 1
 Score =  166 bits (421), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 107/334 (32%), Positives = 180/334 (53%), Gaps = 13/334 (3%)
Query: 35  ELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT 94
           ++P  GP +VL+++ A  ICG+D+H  +    A   +K P + GHE AG + ++G  V+ 
Sbjct: 23  DVPKPGPGEVLIKVLATSICGTDLHIYEWNEWAQSRIKPPQIXGHEVAGEVVEIGPGVEG 82
Query: 95  LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPD 154
           +  GD V++E  I C +C  C+ G+Y++C   K F      G  A   V PA   +K P 
Sbjct: 83  IEVGDYVSVETHIVCGKCYACRRGQYHVCQNTKIFGV-DTDGVFAEYAVVPAQNIWKNPK 141
Query: 155 NVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDV 214
           ++  E   + EPL   +       I  ++ VLI GAGP+GL+ +  A+A GA  +++ + 
Sbjct: 142 SIPPEYATLQEPLGNAVDTVLAGPISGKS-VLITGAGPLGLLGIAVAKASGAYPVIVSEP 200
Query: 215 DDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSA 274
            D+R  +AK++GAD +  ++   +D+ +EV  I    G G+DV  + +G  K +   L A
Sbjct: 201 SDFRRELAKKVGADYV--INPFEEDVVKEVXDITD--GNGVDVFLEFSGAPKALEQGLQA 256
Query: 275 TRAGGKVCLVGMGHHEMTVPLTPAAV-REVDVVGVF--RYKNTWPLCLELLRSGKIDVKP 331
               G+V L+G+   ++T+      + + + + G+       TW     LL+SGK+++ P
Sbjct: 257 VTPAGRVSLLGLYPGKVTIDFNNLIIFKALTIYGITGRHLWETWYTVSRLLQSGKLNLDP 316
Query: 332 LVTHRF-GFSQKEVEEAFETSARGGTAIKVMFNL 364
           ++TH++ GF +   EEAFE   R G   KV+F L
Sbjct: 317 IITHKYKGFDK--YEEAFEL-XRAGKTGKVVFXL 347

>pdb|3GFB|A Chain A, L-Threonine Dehydrogenase (Tktdh) From The Hyperthermophilic Archaeon Thermococcus Kodakaraensis Length = 350

Iteration: 1
 Score =  162 bits (411), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 106/332 (31%), Positives = 178/332 (53%), Gaps = 12/332 (3%)
Query: 35  ELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT 94
           ++P  GP +VL+++ A  ICG+D+H  +    A   +K P ++GHE AG + +VG  V+ 
Sbjct: 23  DVPKPGPGEVLIKVLATSICGTDLHIYEWNEWAQSRIKPPQIMGHEVAGEVVEVGPGVED 82
Query: 95  LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPD 154
           L  GD +++E  I C +C  CK  RY++C   K F    + G  A+  + PA   +K P 
Sbjct: 83  LQVGDYISVETHIVCGKCYACKHNRYHVCQNTKIFGV-DMDGVFAHYAIVPAKNAWKNPK 141
Query: 155 NVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDV 214
           ++  E  A+ EPL   +       I   +  LI GAGP+GL+ +  A+A GA  +++ + 
Sbjct: 142 DMPPEYAALQEPLGNAVDTVLAGPIAGRST-LITGAGPLGLLGIAVAKASGAYPVIVSEP 200
Query: 215 DDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSA 274
            ++R  +AK++GAD +  V+   +D  + V  I    G G++V  + +G  K +   L A
Sbjct: 201 SEFRRKLAKKVGADYV--VNPFEEDPVKFVMDITD--GAGVEVFLEFSGAPKALEQGLKA 256
Query: 275 TRAGGKVCLVGMGHHEMTVPLTPAAV-REVDVVGVF--RYKNTWPLCLELLRSGKIDVKP 331
              GG+V L+G+   E+T+      + + ++V G+       TW     L++SGK+++ P
Sbjct: 257 VTPGGRVSLLGLFPREVTIDFNNLIIFKALEVHGITGRHLWETWYTVSSLIQSGKLNLDP 316
Query: 332 LVTHRF-GFSQKEVEEAFETSARGGTAIKVMF 362
           ++TH++ GF +   EEAFE    G T   V F
Sbjct: 317 IITHKYKGFDK--FEEAFELMRAGKTGKVVFF 346

>pdb|4EJ6|A Chain A, Crystal Structure Of A Putative Zinc-Binding Dehydrogenase (Target Psi-012003) From Sinorhizobium Meliloti 1021 Length = 370

Iteration: 1
 Score =  159 bits (401), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 100/326 (30%), Positives = 164/326 (50%), Gaps = 13/326 (3%)
Query: 20  AAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGH 79
           A  L  V  + ++   +P  GP D+LV+++A GICG+D H L      +F    P+ +GH
Sbjct: 26  AVRLESVGNISVRNVGIPEPGPDDLLVKVEACGICGTDRHLLH----GEFPSTPPVTLGH 81
Query: 80  ECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVH--GS 137
           E  G++ + GS V+ + PG R+  +P ISC RC  C+ GR NLC  ++      +H  G 
Sbjct: 82  EFCGIVVEAGSAVRDIAPGARITGDPNISCGRCPQCQAGRVNLCRNLRAIG---IHRDGG 138
Query: 138 LANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVT 197
            A  V+ P    F++P  +    GA CEPL+  LH    + I   + V I+G G IGL+T
Sbjct: 139 FAEYVLVPRKQAFEIPLTLDPVHGAFCEPLACCLHGVDLSGIKAGSTVAILGGGVIGLLT 198
Query: 198 MLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDV 257
           +  AR  GA  +++      +  +A+E+GA   V  S    D+ E +      +  G+DV
Sbjct: 199 VQLARLAGATTVILSTRQATKRRLAEEVGATATVDPSAG--DVVEAIAGPVGLVPGGVDV 256
Query: 258 SFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAV--REVDVVGVFRYKNTW 315
             +CAG  +T+  +    +AGG V ++G+      V + P  +  RE+ V+G F      
Sbjct: 257 VIECAGVAETVKQSTRLAKAGGTVVILGVLPQGEKVEIEPFDILFRELRVLGSFINPFVH 316
Query: 316 PLCLELLRSGKIDVKPLVTHRFGFSQ 341
               +L+ +G I++   ++ R    +
Sbjct: 317 RRAADLVATGAIEIDRXISRRISLDE 342

>pdb|2DQ4|A Chain A, Crystal Structure Of Threonine 3-Dehydrogenase Length = 343

Iteration: 1
 Score =  155 bits (393), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 108/331 (32%), Positives = 171/331 (51%), Gaps = 13/331 (3%)
Query: 36  LPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTL 95
           +P  GP ++LVR++A  ICG+D+H  K    A   ++ P+V GHE +GV+E VG  V+  
Sbjct: 20  VPEPGPGEILVRVEAASICGTDLHIWKWDAWARGRIRPPLVTGHEFSGVVEAVGPGVRRP 79
Query: 96  VPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDN 155
             GD V+LE  I C  C  C+ G Y++C   +        G  A  VV PA+  +  P +
Sbjct: 80  QVGDHVSLESHIVCHACPACRTGNYHVCLNTQILGV-DRDGGFAEYVVVPAENAWVNPKD 138
Query: 156 VSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVD 215
           +  E  A+ EP    +H     +     +VLI GAGPIGL+  +  RA GA  I++ D +
Sbjct: 139 LPFEVAAILEPFGNAVHTVYAGSGVSGKSVLITGAGPIGLMAAMVVRASGAGPILVSDPN 198
Query: 216 DYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSAT 275
            YRL+ A+   AD +V     L++  + +E +++  G+G++V  + +G    +   L A 
Sbjct: 199 PYRLAFARPY-ADRLVN---PLEE--DLLEVVRRVTGSGVEVLLEFSGNEAAIHQGLMAL 252
Query: 276 RAGGKVCLVGMGHHEMTVPLTPAAV-REVDVVGVF--RYKNTWPLCLELLRSGKIDVKPL 332
             GG+  ++G+    +   L    V R +   G+   R   TW     L+ SG++D+ PL
Sbjct: 253 IPGGEARILGIPSDPIRFDLAGELVMRGITAFGIAGRRLWQTWMQGTALVYSGRVDLSPL 312
Query: 333 VTHRFGFSQKEVEEAFETSARGGTAIKVMFN 363
           +THR   S+    EAF   A  G A+KV+ +
Sbjct: 313 LTHRLPLSR--YREAFGLLA-SGQAVKVILD 340

>pdb|4A2C|A Chain A, Crystal Structure Of Galactitol-1-Phosphate Dehydrogenase From Escherichia Coli Length = 346

Iteration: 1
 Score =  137 bits (344), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 104/343 (30%), Positives = 159/343 (46%), Gaps = 48/343 (13%)
Query: 43  DVLVRMKAVGICGSDV--------HYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT 94
           +V V++ + G+CGSD+        HY             P+ +GHE +G I+ VGS V  
Sbjct: 27  EVRVKIASSGLCGSDLPRIFKNGAHYY------------PITLGHEFSGYIDAVGSGVDD 74
Query: 95  LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPD 154
           L PGD VA  P + C+ C  C  G Y+ C +  F  +    G  A  +V      F LP 
Sbjct: 75  LHPGDAVACVPLLPCFTCPECLKGFYSQCAKYDFIGSRR-DGGFAEYIVVKRKNVFALPT 133
Query: 155 NVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDV 214
           ++ +E+GA  EP++VGLHA   A      NV+I+GAG IGL+ +  A A GA  +  +D+
Sbjct: 134 DMPIEDGAFIEPITVGLHAFHLAQGCENKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDI 193
Query: 215 DDYRLSVAKELGADNIVKVST----NLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMST 270
              +L++AK  GA      S      +Q +  E+   Q  + T        AG  +T+  
Sbjct: 194 SSEKLALAKSFGAMQTFNSSEMSAPQMQSVLRELRFNQLILET--------AGVPQTVEL 245
Query: 271 ALSATRAGGKVCLVGMGHHEMTVPLTPAAV-----REVDVVGVF-RYKNTWP-----LCL 319
           A+       ++ LVG  H ++   LT A       +E+ V+G +  Y + WP        
Sbjct: 246 AVEIAGPHAQLALVGTLHQDLH--LTSATFGKILRKELTVIGSWMNYSSPWPGQEWETAS 303
Query: 320 ELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMF 362
            LL   K+ ++PL+ HR  F  +   +A    AR     KV+ 
Sbjct: 304 RLLTERKLSLEPLIAHRGSF--ESFAQAVRDIARNAMPGKVLL 344

>pdb|1RJW|A Chain A, Crystal Structure Of Nad(+)-Dependent Alcohol Dehydrogenase From Bacillus Stearothermophilus Strain Lld-R Length = 339

Iteration: 1
 Score =  129 bits (325), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 108/347 (31%), Positives = 166/347 (47%), Gaps = 34/347 (9%)
Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKE--PMVIGHECAGVIE 86
           LKI+  E P++   +VLVR+KA G+C +D+H        D+ VK   P++ GHE  G++E
Sbjct: 13  LKIKEVEKPTISYGEVLVRIKACGVCHTDLHAAH----GDWPVKPKLPLIPGHEGVGIVE 68
Query: 87  KVGSEVKTLVPGDRVALEPGI--SCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVH 144
           +VG  V  L  GDRV + P +  +C  CD+C  G+  LC   K  A   V G  A     
Sbjct: 69  EVGPGVTHLKVGDRVGI-PWLYSACGHCDYCLSGQETLCEHQK-NAGYSVDGGYAEYCRA 126
Query: 145 PADLCFKLPDNVSLEEGA--MCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGAR 202
            AD   K+PDN+S EE A   C  ++    A +     P   V I G G +G V +  A+
Sbjct: 127 AADYVVKIPDNLSFEEAAPIFCAGVTT-YKALKVTGAKPGEWVAIYGIGGLGHVAVQYAK 185
Query: 203 AFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCA 262
           A G   +V VD+ D +L +AKELGAD +V        + E+  K  K    G+  +   A
Sbjct: 186 AMGL-NVVAVDIGDEKLELAKELGADLVV------NPLKEDAAKFMKEKVGGVHAAVVTA 238
Query: 263 GFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAVREVDVVG-VFRYKNTWPLCLEL 321
                  +A ++ R GG   LVG+   EM +P+    +  + ++G +   +      L+ 
Sbjct: 239 VSKPAFQSAYNSIRRGGACVLVGLPPEEMPIPIFDTVLNGIKIIGSIVGTRKDLQEALQF 298
Query: 322 LRSGK----IDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL 364
              GK    I+V+PL         +++ E F+   +G    +V+  L
Sbjct: 299 AAEGKVKTIIEVQPL---------EKINEVFDRMLKGQINGRVVLTL 336

>pdb|3PII|A Chain A, Crystal Structure Of Mutant Of Ht- Alcohol Dehydrogenase With Substrate Analogue Butyramide Length = 339

Iteration: 1
 Score =  129 bits (324), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 108/347 (31%), Positives = 165/347 (47%), Gaps = 34/347 (9%)
Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKE--PMVIGHECAGVIE 86
           LKI+  E P++   +VLVR+KA G+C +D+H        D+ VK   P++ GHE  G++E
Sbjct: 13  LKIKEVEKPTISYGEVLVRIKACGVCHTDLHAAH----GDWPVKPKLPLIPGHEGVGIVE 68
Query: 87  KVGSEVKTLVPGDRVALEPGI--SCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVH 144
           +VG  V  L  GDRV + P +  +C  CD+C  G+  LC   K  A   V G  A     
Sbjct: 69  EVGPGVTHLKVGDRVGI-PWLYSACGHCDYCLSGQETLCEHQK-NAGYSVDGGYAEYCRA 126
Query: 145 PADLCFKLPDNVSLEEGA--MCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGAR 202
            AD   K+PDN+S EE A   C  ++    A +     P   V I G G  G V +  A+
Sbjct: 127 AADYVVKIPDNLSFEEAAPIFCAGVTT-YKALKVTGAKPGEWVAIYGIGGFGHVAVQYAK 185
Query: 203 AFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCA 262
           A G   +V VD+ D +L +AKELGAD +V        + E+  K  K    G+  +   A
Sbjct: 186 AMGL-NVVAVDIGDEKLELAKELGADLVV------NPLKEDAAKFMKEKVGGVHAAVVTA 238
Query: 263 GFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAVREVDVVG-VFRYKNTWPLCLEL 321
                  +A ++ R GG   LVG+   EM +P+    +  + ++G +   +      L+ 
Sbjct: 239 VSKPAFQSAYNSIRRGGACVLVGLPPEEMPIPIFDTVLNGIKIIGSIVGTRKDLQEALQF 298
Query: 322 LRSGK----IDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL 364
              GK    I+V+PL         +++ E F+   +G    +V+  L
Sbjct: 299 AAEGKVKTIIEVQPL---------EKINEVFDRMLKGQINGRVVLTL 336

>pdb|4ILK|A Chain A, Crystal Structure Of Short Chain Alcohol Dehydrogenase (rspb) From E. Coli Cft073 (efi Target Efi-506413) Complexed With Cofactor Nadh Length = 359

Iteration: 1
 Score =  127 bits (318), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 93/320 (29%), Positives = 144/320 (45%), Gaps = 19/320 (5%)
Query: 27  NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIE 86
           N L I   E+P+    +V V++K  GICGSD H     R  +   K P VIGHE  GVI+
Sbjct: 30  NQLSIIEREIPTPSAGEVRVKVKLAGICGSDSH---IYRGHNPFAKYPRVIGHEFFGVID 86
Query: 87  KVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVH--GSLANQVVH 144
            VG  V++   G+RVA++P +SC  C  C  G+ N+C  +       VH  G  +   V 
Sbjct: 87  AVGEGVESARVGERVAVDPVVSCGHCYPCSIGKPNVCTTLAVLG---VHADGGFSEYAVV 143
Query: 145 PADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGL-VTMLGARA 203
           PA   +K+P+ V+ +   M EP ++  +            VL+ GAGPIGL +  +    
Sbjct: 144 PAKNAWKIPEAVADQYAVMIEPFTIAANVTGHGQPTENDTVLVYGAGPIGLTIVQVLKGV 203
Query: 204 FGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNL--QDIAEEVEKIQKAMGTGIDVSFDC 261
           +    +++ D  D RL  AKE GAD  +  S     +  AE+        G    +  D 
Sbjct: 204 YNVKNVIVADRIDERLEKAKESGADWAINNSQTPLGESFAEK--------GIKPTLIIDA 255
Query: 262 AGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKNTWPLCLEL 321
           A     +  A++      ++ L+G       V       +E+ +       N +P+ ++ 
Sbjct: 256 ACHPSILKEAVTLASPAARIVLMGFSSEPSEVIQQGITGKELSIFSSRLNANKFPVVIDW 315
Query: 322 LRSGKIDVKPLVTHRFGFSQ 341
           L  G I  + L+TH F F  
Sbjct: 316 LSKGLIKPEKLITHTFDFQH 335

>pdb|2EIH|A Chain A, Crystal Structure Of Nad-Dependent Alcohol Dehydrogenase Length = 343

Iteration: 1
 Score =  113 bits (282), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 97/316 (30%), Positives = 149/316 (47%), Gaps = 20/316 (6%)
Query: 25  GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGV 84
           G   L++    +P  GP +V VR+KA  +   DV   K +      +  P V+G + +GV
Sbjct: 11  GPEVLEVADLPVPEPGPKEVRVRLKAAALNHLDVWVRKGVASPKLPL--PHVLGADGSGV 68
Query: 85  IEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVH 144
           ++ VG  V+   PGD V + PG+SC RC+ C  G  NLCP  +       HG+ A  VV 
Sbjct: 69  VDAVGPGVEGFAPGDEVVINPGLSCGRCERCLAGEDNLCPRYQILGE-HRHGTYAEYVVL 127
Query: 145 PADLCFKLPDNVSLEEGAMCEPLSVGLHACR----RANIGPETNVLIMGAGP-IGLVTML 199
           P       P N+S EE A   PL+  L A +    +  + P  +VL+M AG  + +  + 
Sbjct: 128 PEANLAPKPKNLSFEEAAAI-PLTF-LTAWQMVVDKLGVRPGDDVLVMAAGSGVSVAAIQ 185
Query: 200 GARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF 259
            A+ FGA R++     + +L  AK LGAD  V  +    D  +EV ++    G G D   
Sbjct: 186 IAKLFGA-RVIATAGSEDKLRRAKALGADETVNYTH--PDWPKEVRRLTG--GKGADKVV 240
Query: 260 DCAGFNKTMSTALSATRAGGKVCLVGMGH-HEMTVPLTPAAVREVDVVG-VFRYKNTWPL 317
           D  G        + AT  GG++ + G    +E T+P      R++ ++G     K+    
Sbjct: 241 DHTG-ALYFEGVIKATANGGRIAIAGASSGYEGTLPFAHVFYRQLSILGSTMASKSRLFP 299
Query: 318 CLELLRSGKIDVKPLV 333
            L  +  GK+  KP+V
Sbjct: 300 ILRFVEEGKL--KPVV 313

>pdb|2EER|A Chain A, Structural Study Of Project Id St2577 From Sulfolobus Tokodaii Strain7 Length = 347

Iteration: 1
 Score =  112 bits (280), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 97/330 (29%), Positives = 153/330 (46%), Gaps = 17/330 (5%)
Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLK----TLRCA-DFVVKEPMVIGHECAG 83
           LK++   +P      VL++++A G+C SDVH  +     LR   D  VK P+ +GHE AG
Sbjct: 13  LKLEDIPIPKPKGSQVLIKIEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHEIAG 72
Query: 84  VIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVV 143
            IE+VG EV     GD VA+ P      C +C+ G  +LC   ++       G+ A  V+
Sbjct: 73  RIEEVGDEVVGYSKGDLVAVNPWEGEGNCYYCRIGEEHLCDSPRWLGI-NYDGAYAEYVL 131
Query: 144 HP-ADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGA-GPIGLVTMLGA 201
            P     +KL    ++E   +         A R+A++ P   ++++GA G +G + +  A
Sbjct: 132 VPHYKYLYKLRRLSAVEAAPLTCSGVTTYRAVRKASLDPSKTLVVIGAGGGLGTMAIQIA 191
Query: 202 RAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDC 261
           +A     I+ VDV +  L  AK  GAD ++  S+  QD   E+ +I +  G G D   D 
Sbjct: 192 KAVSGATIIGVDVREEALEAAKRAGADYVINASS--QDPVSEIRRITQ--GKGADAVIDL 247
Query: 262 AGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKNTWPL-CLE 320
               KT+S         GK  +VG+   ++        + EV  +G      +  L  + 
Sbjct: 248 NNSEKTLSIYPYVLAKQGKYVMVGLFGADLKYHAPLITLNEVQFIGSLVGNQSDFLGIMS 307
Query: 321 LLRSGKIDVKPLVTHRFGFSQKEVEEAFET 350
           L  +GK  VKP+VT       +E  EA + 
Sbjct: 308 LAEAGK--VKPMVTKTMKL--EEANEAIDN 333

>pdb|1E3L|A Chain A, P47h Mutant Of Mouse Class Ii Alcohol Dehydrogenase Complex With Nadh Length = 376

Iteration: 1
 Score =  111 bits (277), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 96/351 (27%), Positives = 159/351 (45%), Gaps = 42/351 (11%)
Query: 21  AWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHE 80
           AW  G + L I+  E+      +V +++ A  +C +D++     + A F    P+V+GHE
Sbjct: 14  AWKTG-SPLCIEEIEVSPPKACEVRIQVIATCVCHTDINATDPKKKALF----PVVLGHE 68
Query: 81  CAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLAN 140
           CAG++E VG  V    PGD+V       C RC  C     NLC +++ F  P +   L  
Sbjct: 69  CAGIVESVGPGVTNFKPGDKVIPFFAPQCKRCKLCLSPLTNLCGKLRNFKYPTIDQELME 128
Query: 141 Q-------------------------VVHPADLCFKLPDNVSLEEGAM--CEPLSVGLHA 173
                                     VV  A+L  ++ D  +LE   +  C   S    A
Sbjct: 129 DRTSRFTCKGRSIYHFMGVSSFSQYTVVSEANLA-RVDDEANLERVCLIGCGFSSGYGAA 187
Query: 174 CRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKV 233
              A + P +   + G G +GL  ++G +  GA RI+ +D++  +   AK LGA + +  
Sbjct: 188 INTAKVTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKALGATDCL-- 245
Query: 234 STNLQDIAEEVEK-IQKAMGTGIDVSFDCAGFNKTMSTALSATRAG-GKVCLVGMGHHEM 291
             N +++ + V+  I +    G+D S DCAG  +T+  A+  T  G G   +VG    EM
Sbjct: 246 --NPRELDKPVQDVITELTAGGVDYSLDCAGTAQTLKAAVDCTVLGWGSCTVVGAKVDEM 303
Query: 292 TVPLTPAAV-REVD--VVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGF 339
           T+P     + R ++    G ++  ++ P  +   ++ K D+  LVTH   F
Sbjct: 304 TIPTVDVILGRSINGTFFGGWKSVDSVPNLVSDYKNKKFDLDLLVTHALPF 354

>pdb|1EE2|B Chain B, The Structure Of Steroid-Active Alcohol Dehydrogenase At 1.54 A Resolution Length = 373

Iteration: 1
 Score =  111 bits (277), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 98/370 (26%), Positives = 163/370 (44%), Gaps = 51/370 (13%)
Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
             I+  E+     ++V ++M A GIC SD H +        V   P++ GHE AG++E +
Sbjct: 21  FSIEEVEVAPPKAHEVRIKMVAAGICRSDDHVVS----GTLVAPLPVIAGHEAAGIVESI 76
Query: 89  GSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATP---------------- 132
           G  V T+ PGD+V       C +C  CK    NLC  +K  + P                
Sbjct: 77  GEGVTTVRPGDKVIPLFIPQCGKCSVCKHPEGNLC--LKNLSMPRGTMQDGTSRFTCRGK 134
Query: 133 PVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPL----------SVGL-HACRRANIGP 181
           P+H  L           + + D +S+ +     PL          S G   A + A +  
Sbjct: 135 PIHHFLGTSTFSQ----YTVVDEISVAKIDAASPLEKVCLVGCGFSTGYGSAVKVAKVTQ 190
Query: 182 ETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIA 241
            +   + G G +GL  ++G +A GA RI+ VD++  + + AKE+GA   V    N QD  
Sbjct: 191 GSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECV----NPQDYK 246
Query: 242 EEVEKIQKAMGT-GIDVSFDCAGFNKTMSTALSATR-AGGKVCLVGMGHHEMTVPLTP-- 297
           + ++++   M   G+D SF+  G   TM  ALS  + A G   +VG+      + + P  
Sbjct: 247 KPIQEVLTEMSNGGVDFSFEVIGRLDTMVAALSCCQEAYGVSVIVGVPPDSQNLSMNPML 306
Query: 298 ---AAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARG 354
                  +  + G F+ K++ P  +    + K  + PL+TH   F  +++ E F+   R 
Sbjct: 307 LLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPF--EKINEGFDL-LRS 363
Query: 355 GTAIKVMFNL 364
           G +I+ +   
Sbjct: 364 GKSIRTILTF 373

>pdb|1EE2|A Chain A, The Structure Of Steroid-Active Alcohol Dehydrogenase At 1.54 A Resolution Length = 373

Iteration: 1
 Score =  111 bits (277), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 98/370 (26%), Positives = 163/370 (44%), Gaps = 51/370 (13%)
Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
             I+  E+     ++V ++M A GIC SD H +        V   P++ GHE AG++E +
Sbjct: 21  FSIEEVEVAPPKAHEVRIKMVAAGICRSDDHVVS----GTLVAPLPVIAGHEAAGIVESI 76
Query: 89  GSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATP---------------- 132
           G  V T+ PGD+V       C +C  CK    NLC  +K  + P                
Sbjct: 77  GEGVTTVRPGDKVIPLFIPQCGKCSVCKHPEGNLC--LKNLSMPRGTMQDGTSRFTCRGK 134
Query: 133 PVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPL----------SVGL-HACRRANIGP 181
           P+H  L           + + D +S+ +     PL          S G   A + A +  
Sbjct: 135 PIHHFLGTSTFSQ----YTVVDEISVAKIDAASPLEKVCLVGCGFSTGYGSAVKVAKVTQ 190
Query: 182 ETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIA 241
            +   + G G +GL  ++G +A GA RI+ VD++  + + AKE+GA   V    N QD  
Sbjct: 191 GSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECV----NPQDYK 246
Query: 242 EEVEKIQKAMGT-GIDVSFDCAGFNKTMSTALSATR-AGGKVCLVGMGHHEMTVPLTP-- 297
           + ++++   M   G+D SF+  G   TM  ALS  + A G   +VG+      + + P  
Sbjct: 247 KPIQEVLTEMSNGGVDFSFEVIGRLDTMVAALSCCQEAYGVSVIVGVPPDSQNLSMNPML 306
Query: 298 ---AAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARG 354
                  +  + G F+ K++ P  +    + K  + PL+TH   F  +++ E F+   R 
Sbjct: 307 LLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPF--EKINEGFDL-LRS 363
Query: 355 GTAIKVMFNL 364
           G +I+ +   
Sbjct: 364 GKSIRTILTF 373

>pdb|1E3E|A Chain A, Mouse Class Ii Alcohol Dehydrogenase Complex With Nadh Length = 376

Iteration: 1
 Score =  110 bits (276), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 96/351 (27%), Positives = 159/351 (45%), Gaps = 42/351 (11%)
Query: 21  AWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHE 80
           AW  G + L I+  E+      +V +++ A  +C +D++     + A F    P+V+GHE
Sbjct: 14  AWKTG-SPLCIEEIEVSPPKACEVRIQVIATCVCPTDINATDPKKKALF----PVVLGHE 68
Query: 81  CAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLAN 140
           CAG++E VG  V    PGD+V       C RC  C     NLC +++ F  P +   L  
Sbjct: 69  CAGIVESVGPGVTNFKPGDKVIPFFAPQCKRCKLCLSPLTNLCGKLRNFKYPTIDQELME 128
Query: 141 Q-------------------------VVHPADLCFKLPDNVSLEEGAM--CEPLSVGLHA 173
                                     VV  A+L  ++ D  +LE   +  C   S    A
Sbjct: 129 DRTSRFTCKGRSIYHFMGVSSFSQYTVVSEANLA-RVDDEANLERVCLIGCGFSSGYGAA 187
Query: 174 CRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKV 233
              A + P +   + G G +GL  ++G +  GA RI+ +D++  +   AK LGA + +  
Sbjct: 188 INTAKVTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKALGATDCL-- 245
Query: 234 STNLQDIAEEVEK-IQKAMGTGIDVSFDCAGFNKTMSTALSATRAG-GKVCLVGMGHHEM 291
             N +++ + V+  I +    G+D S DCAG  +T+  A+  T  G G   +VG    EM
Sbjct: 246 --NPRELDKPVQDVITELTAGGVDYSLDCAGTAQTLKAAVDCTVLGWGSCTVVGAKVDEM 303
Query: 292 TVPLTPAAV-REVD--VVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGF 339
           T+P     + R ++    G ++  ++ P  +   ++ K D+  LVTH   F
Sbjct: 304 TIPTVDVILGRSINGTFFGGWKSVDSVPNLVSDYKNKKFDLDLLVTHALPF 354

>pdb|1MGO|A Chain A, Horse Liver Alcohol Dehydrogenase Phe93ala Mutant Length = 374

Iteration: 1
 Score =  110 bits (274), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 97/370 (26%), Positives = 162/370 (43%), Gaps = 50/370 (13%)
Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
             I+  E+     ++V ++M A GIC SD H +        V   P++ GHE AG++E +
Sbjct: 21  FSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVS----GTLVTPLPVIAGHEAAGIVESI 76
Query: 89  GSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATP---------------- 132
           G  V T+ PGD+V       C +C  CK    N C +    + P                
Sbjct: 77  GEGVTTVRPGDKVIPLATPQCGKCRVCKHPEGNFCLKNDL-SMPRGTMQDGTSRFTCRGK 135
Query: 133 PVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPL----------SVGL-HACRRANIGP 181
           P+H  L           + + D +S+ +     PL          S G   A + A +  
Sbjct: 136 PIHHFLGTSTFSQ----YTVVDEISVAKIDAASPLEKVCLIGCGFSTGYGSAVKVAKVTQ 191
Query: 182 ETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIA 241
            +   + G G +GL  ++G +A GA RI+ VD++  + + AKE+GA   V    N QD  
Sbjct: 192 GSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECV----NPQDYK 247
Query: 242 EEVEKIQKAMGT-GIDVSFDCAGFNKTMSTALSATR-AGGKVCLVGMGHHEMTVPLTP-- 297
           + ++++   M   G+D SF+  G   TM TALS  + A G   +VG+      + + P  
Sbjct: 248 KPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDSQNLSMNPML 307
Query: 298 ---AAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARG 354
                  +  + G F+ K++ P  +    + K  + PL+TH   F  +++ E F+   R 
Sbjct: 308 LLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPF--EKINEGFDL-LRS 364
Query: 355 GTAIKVMFNL 364
           G +I+ +   
Sbjct: 365 GESIRTILTF 374

>pdb|1HDZ|A Chain A, Three-Dimensional Structures Of Three Human Alcohol Dehydrogenase Variants: Correlations With Their Functional Differences Length = 374

Iteration: 1
 Score =  109 bits (273), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 94/354 (26%), Positives = 155/354 (43%), Gaps = 47/354 (13%)
Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
             I+  E+     Y+V ++M AVGICG+D H +      + V   P+++GHE AG++E V
Sbjct: 21  FSIEDVEVAPPKAYEVRIKMVAVGICGTDDHVVS----GNLVTPLPVILGHEAAGIVESV 76
Query: 89  GSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPE-------------MKFFAT--PP 133
           G  V T+ PGD+V       C +C  CK    N C +              + F     P
Sbjct: 77  GEGVTTVKPGDKVIPLFTPQCGKCRVCKNPESNYCLKNDLGNPRGTLQDGTRRFTCRGKP 136
Query: 134 VHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPL----------SVGL-HACRRANIGPE 182
           +H  L           + + D  ++ +     PL          S G   A   A + P 
Sbjct: 137 IHHFLGTSTFSQ----YTVVDENAVAKIDAASPLEKVCLIGCGFSTGYGSAVNVAKVTPG 192
Query: 183 TNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAE 242
           +   + G G +GL  ++G +A GA RI+ VD++  + + AKELGA   +    N QD  +
Sbjct: 193 STCAVFGLGGVGLSAVMGCKAAGAARIIAVDINKDKFAKAKELGATECI----NPQDYKK 248
Query: 243 EVEKIQKAMGT-GIDVSFDCAG-FNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTP--- 297
            ++++ K M   G+D SF+  G  +  M++ L    A G   +VG+      + + P   
Sbjct: 249 PIQEVLKEMTDGGVDFSFEVIGRLDTMMASLLCCHEACGTSVIVGVPPASQNLSINPMLL 308
Query: 298 --AAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFE 349
                 +  V G F+ K   P  +    + K  +  L+TH   F  +++ E F+
Sbjct: 309 LTGRTWKGAVYGGFKSKEGIPKLVADFMAKKFSLDALITHVLPF--EKINEGFD 360

>pdb|1AXE|A Chain A, Crystal Structure Of The Active-Site Mutant Phe93->trp Of Horse Liver Alcohol Dehydrogenase In Complex With Nad And Inhibitor Trifluoroethanol Length = 374

Iteration: 1
 Score =  109 bits (272), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 97/370 (26%), Positives = 162/370 (43%), Gaps = 50/370 (13%)
Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
             I+  E+     ++V ++M A GIC SD H +        V   P++ GHE AG++E +
Sbjct: 21  FSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVS----GTLVTPLPVIAGHEAAGIVESI 76
Query: 89  GSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATP---------------- 132
           G  V T+ PGD+V       C +C  CK    N C +    + P                
Sbjct: 77  GEGVTTVRPGDKVIPLWTPQCGKCRVCKHPEGNFCLKNDL-SMPRGTMQDGTSRFTCRGK 135
Query: 133 PVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPL----------SVGL-HACRRANIGP 181
           P+H  L           + + D +S+ +     PL          S G   A + A +  
Sbjct: 136 PIHHFLGTSTFSQ----YTVVDEISVAKIDAASPLEKVCLIGCGFSTGYGSAVKVAKVTQ 191
Query: 182 ETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIA 241
            +   + G G +GL  ++G +A GA RI+ VD++  + + AKE+GA   V    N QD  
Sbjct: 192 GSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECV----NPQDYK 247
Query: 242 EEVEKIQKAMGT-GIDVSFDCAGFNKTMSTALSATR-AGGKVCLVGMGHHEMTVPLTP-- 297
           + ++++   M   G+D SF+  G   TM TALS  + A G   +VG+      + + P  
Sbjct: 248 KPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDSQNLSMNPML 307
Query: 298 ---AAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARG 354
                  +  + G F+ K++ P  +    + K  + PL+TH   F  +++ E F+   R 
Sbjct: 308 LLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPF--EKINEGFDL-LRS 364
Query: 355 GTAIKVMFNL 364
           G +I+ +   
Sbjct: 365 GESIRTILTF 374

>pdb|6ADH|A Chain A, Structure Of Triclinic Ternary Complex Of Horse Liver Alcohol Dehydrogenase At 2.9 Angstroms Resolution Length = 374

Iteration: 1
 Score =  109 bits (272), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 97/370 (26%), Positives = 162/370 (43%), Gaps = 50/370 (13%)
Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
             I+  E+     ++V ++M A GIC SD H +        V   P++ GHE AG++E +
Sbjct: 21  FSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVS----GTLVTPLPVIAGHEAAGIVESI 76
Query: 89  GSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATP---------------- 132
           G  V T+ PGD+V       C +C  CK    N C +    + P                
Sbjct: 77  GEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDL-SMPRGTMQDGTSRFTCRGK 135
Query: 133 PVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPL----------SVGL-HACRRANIGP 181
           P+H  L           + + D +S+ +     PL          S G   A + A +  
Sbjct: 136 PIHHFLGTSTFSQ----YTVVDEISVAKIDAASPLEKVCLIGCGFSTGYGSAVKVAKVTQ 191
Query: 182 ETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIA 241
            +   + G G +GL  ++G +A GA RI+ VD++  + + AKE+GA   V    N QD  
Sbjct: 192 GSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECV----NPQDYK 247
Query: 242 EEVEKIQKAMGT-GIDVSFDCAGFNKTMSTALSATR-AGGKVCLVGMGHHEMTVPLTP-- 297
           + ++++   M   G+D SF+  G   TM TALS  + A G   +VG+      + + P  
Sbjct: 248 KPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDSQNLSMNPML 307
Query: 298 ---AAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARG 354
                  +  + G F+ K++ P  +    + K  + PL+TH   F  +++ E F+   R 
Sbjct: 308 LLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPF--EKINEGFDL-LRS 364
Query: 355 GTAIKVMFNL 364
           G +I+ +   
Sbjct: 365 GESIRTILTF 374

>pdb|3FPL|A Chain A, Chimera Of Alcohol Dehydrogenase By Exchange Of The Cofactor Binding Domain Res 153-295 Of C. Beijerinckii Adh By T. Brockii Adh Length = 351

Iteration: 1
 Score =  108 bits (271), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 103/352 (29%), Positives = 154/352 (43%), Gaps = 49/352 (13%)
Query: 23  LLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECA 82
           +LG+N L     E P  G YD +VR  AV  C SD+H +      D   ++ M++GHE  
Sbjct: 6   MLGINKLGWIEKERPVAGSYDAIVRPLAVSPCTSDIHTVFEGALGD---RKNMILGHEAV 62
Query: 83  GVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEM----KFFATPP-VHGS 137
           G + +VGSEVK   PGDRV +      WR    + G       M    KF      V G 
Sbjct: 63  GEVVEVGSEVKDFKPGDRVIVPCTTPDWRSLEVQAGFQQHSNGMLAGWKFSNFKDGVFGE 122
Query: 138 LANQVVHPADLCFK-LPDNVSLEEGAM-CEPLSVGLHACRRANIGPETNVLIMGAGPIGL 195
             +  V+ AD+    LP ++ LE   M  + ++ G H    A+I     V ++G GP+GL
Sbjct: 123 YFH--VNDADMNLAILPKDMPLENAVMITDMMTTGFHGAELADIELGATVAVLGIGPVGL 180
Query: 196 VTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGI 255
           + + GA+  GA RI+ V      +  AK  GA +IV    N +D   E + +    G G+
Sbjct: 181 MAVAGAKLRGAGRIIAVGSRPVCVDAAKYYGATDIV----NYKDGPIESQIMNLTEGKGV 236
Query: 256 DVSFDCAGFNKTMSTALSATRAGGKVCLV------------------GMGHHEMTVPLTP 297
           D +    G    M+TA+   + GG +  V                  GM H  +   L P
Sbjct: 237 DAAIIAGGNADIMATAVKIVKPGGTIANVNYFGEGEVLPVPRLEWGCGMAHKTIKGGLCP 296
Query: 298 AAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRF-GFSQKEVEEAF 348
                    G  R +    +  +++   ++D+  LVTH + GF    +EEA 
Sbjct: 297 G--------GRLRAE----MLRDMVVYNRVDLSKLVTHVYHGFDH--IEEAL 334

>pdb|2NVB|A Chain A, Contribution Of Pro275 To The Thermostability Of The Alcohol Dehydrogenases (Adhs) Length = 352

Iteration: 1
 Score =  108 bits (271), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 101/340 (29%), Positives = 149/340 (43%), Gaps = 49/340 (14%)
Query: 35  ELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT 94
           E P+ GP+D +VR  AV  C SD+H   T+       +  M++GHE  G + +VGSEVK 
Sbjct: 18  EKPAPGPFDAIVRPLAVAPCTSDIH---TVFEGAIGERHNMILGHEAVGEVVEVGSEVKD 74
Query: 95  LVPGDRVALEPGISCWRCDHCKGGRYNLCPEM----KFFATPP-VHGSLANQVVHPADLC 149
             PGDRV +      WR    + G +     M    KF      V G   +  V+ AD+ 
Sbjct: 75  FKPGDRVVVPAITPDWRTSEVQRGYHQHSGGMLAGWKFSNVKDGVFGEFFH--VNDADMN 132
Query: 150 F-KLPDNVSLEEGAMC-EPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAP 207
              LP  + LE   M  + ++ G H    A+I     V ++G GP+GL+ + GA+  GA 
Sbjct: 133 LAHLPKEIPLEAAVMIPDMMTTGFHGAELADIELGATVAVLGIGPVGLMAVAGAKLRGAG 192
Query: 208 RIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKT 267
           RI+ V      +  AK  GA +IV    N +D   E + +    G G+D +    G    
Sbjct: 193 RIIAVGSRPVCVDAAKYYGATDIV----NYKDGPIESQIMNLTEGKGVDAAIIAGGNADI 248
Query: 268 MSTALSATRAGGKVCLV------------------GMGHHEMTVPLTPAAVREVDVVGVF 309
           M+TA+   + GG +  V                  GM H  +   L P         G  
Sbjct: 249 MATAVKIVKPGGTIANVNYFGEGEVLDVPRLEWGCGMAHKTIKGGLCPG--------GRL 300
Query: 310 RYKNTWPLCLELLRSGKIDVKPLVTHRF-GFSQKEVEEAF 348
           R +      ++L+   ++D   LVTH F GF    +E+AF
Sbjct: 301 RMER----LIDLVFYKRVDPSKLVTHVFRGFDN--IEKAF 334

>pdb|3OQ6|A Chain A, Horse Liver Alcohol Dehydrogenase A317c Mutant Complexed With Nad+ And 2,3,4,5,6-Pentafluorobenzyl Alcohol Length = 374

Iteration: 1
 Score =  108 bits (271), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 97/370 (26%), Positives = 162/370 (43%), Gaps = 50/370 (13%)
Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
             I+  E+     ++V ++M A GIC SD H +        V   P++ GHE AG++E +
Sbjct: 21  FSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVS----GTLVTPLPVIAGHEAAGIVESI 76
Query: 89  GSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATP---------------- 132
           G  V T+ PGD+V       C +C  CK    N C +    + P                
Sbjct: 77  GEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDL-SMPRGTMQDGTSRFTCRGK 135
Query: 133 PVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPL----------SVGL-HACRRANIGP 181
           P+H  L           + + D +S+ +     PL          S G   A + A +  
Sbjct: 136 PIHHFLGTSTFSQ----YTVVDEISVAKIDAASPLEKVCLIGCGFSTGYGSAVKVAKVTQ 191
Query: 182 ETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIA 241
            +   + G G +GL  ++G +A GA RI+ VD++  + + AKE+GA   V    N QD  
Sbjct: 192 GSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECV----NPQDYK 247
Query: 242 EEVEKIQKAMGT-GIDVSFDCAGFNKTMSTALSATR-AGGKVCLVGMGHHEMTVPLTPAA 299
           + ++++   M   G+D SF+  G   TM TALS  + A G   +VG+      + + P  
Sbjct: 248 KPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDSQNLSMNPML 307
Query: 300 VREVD-----VVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARG 354
           +         + G F+ K++ P  +    + K  + PL+TH   F  +++ E F+   R 
Sbjct: 308 LLSGRTWKGCIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPF--EKINEGFDL-LRS 364
Query: 355 GTAIKVMFNL 364
           G +I+ +   
Sbjct: 365 GESIRTILTF 374

>pdb|1YKF|A Chain A, Nadp-Dependent Alcohol Dehydrogenase From Thermoanaerobium Brockii Length = 352

Iteration: 1
 Score =  108 bits (270), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 101/340 (29%), Positives = 149/340 (43%), Gaps = 49/340 (14%)
Query: 35  ELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT 94
           E P+ GP+D +VR  AV  C SD+H   T+       +  M++GHE  G + +VGSEVK 
Sbjct: 18  EKPAPGPFDAIVRPLAVAPCTSDIH---TVFEGAIGERHNMILGHEAVGEVVEVGSEVKD 74
Query: 95  LVPGDRVALEPGISCWRCDHCKGGRYNLCPEM----KFFATPP-VHGSLANQVVHPADLC 149
             PGDRV +      WR    + G +     M    KF      V G   +  V+ AD+ 
Sbjct: 75  FKPGDRVVVPAITPDWRTSEVQRGYHQHSGGMLAGWKFSNVKDGVFGEFFH--VNDADMN 132
Query: 150 F-KLPDNVSLEEGAMC-EPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAP 207
              LP  + LE   M  + ++ G H    A+I     V ++G GP+GL+ + GA+  GA 
Sbjct: 133 LAHLPKEIPLEAAVMIPDMMTTGFHGAELADIELGATVAVLGIGPVGLMAVAGAKLRGAG 192
Query: 208 RIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKT 267
           RI+ V      +  AK  GA +IV    N +D   E + +    G G+D +    G    
Sbjct: 193 RIIAVGSRPVCVDAAKYYGATDIV----NYKDGPIESQIMNLTEGKGVDAAIIAGGNADI 248
Query: 268 MSTALSATRAGGKVCLV------------------GMGHHEMTVPLTPAAVREVDVVGVF 309
           M+TA+   + GG +  V                  GM H  +   L P         G  
Sbjct: 249 MATAVKIVKPGGTIANVNYFGEGEVLPVPRLEWGCGMAHKTIKGGLCPG--------GRL 300
Query: 310 RYKNTWPLCLELLRSGKIDVKPLVTHRF-GFSQKEVEEAF 348
           R +      ++L+   ++D   LVTH F GF    +E+AF
Sbjct: 301 RMER----LIDLVFYKRVDPSKLVTHVFRGFDN--IEKAF 334

>pdb|1QV6|A Chain A, Horse Liver Alcohol Dehydrogenase His51glnLYS228ARG MUTANT Complexed With Nad+ And 2,4-Difluorobenzyl Alcohol Length = 374

Iteration: 1
 Score =  108 bits (269), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 97/370 (26%), Positives = 161/370 (43%), Gaps = 50/370 (13%)
Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
             I+  E+     ++V ++M A GIC SD   +        V   P++ GHE AG++E +
Sbjct: 21  FSIEEVEVAPPKAHEVRIKMVATGICRSDDQVVS----GTLVTPLPVIAGHEAAGIVESI 76
Query: 89  GSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATP---------------- 132
           G  V T+ PGD+V       C +C  CK    N C +    + P                
Sbjct: 77  GEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDL-SMPRGTMQDGTSRFTCRGK 135
Query: 133 PVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPL----------SVGL-HACRRANIGP 181
           P+H  L           + + D +S+ +     PL          S G   A + A +  
Sbjct: 136 PIHHFLGTSTFSQ----YTVVDEISVAKIDAASPLEKVCLIGCGFSTGYGSAVKVAKVTQ 191
Query: 182 ETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIA 241
            +   + G G +GL  ++G +A GA RI+ VD++  R + AKE+GA   V    N QD  
Sbjct: 192 GSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDRFAKAKEVGATECV----NPQDYK 247
Query: 242 EEVEKIQKAMGT-GIDVSFDCAGFNKTMSTALSATR-AGGKVCLVGMGHHEMTVPLTP-- 297
           + ++++   M   G+D SF+  G   TM TALS  + A G   +VG+      + + P  
Sbjct: 248 KPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDSQNLSMNPML 307
Query: 298 ---AAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARG 354
                  +  + G F+ K++ P  +    + K  + PL+TH   F  +++ E F+   R 
Sbjct: 308 LLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPF--EKINEGFDL-LRS 364
Query: 355 GTAIKVMFNL 364
           G +I+ +   
Sbjct: 365 GESIRTILTF 374

>pdb|1A71|A Chain A, Ternary Complex Of An Active Site Double Mutant Of Horse Liver Alcohol Dehydrogenase, Phe93>trp, Val203>ala With Nad And Trifluoroethanol Length = 374

Iteration: 1
 Score =  107 bits (268), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 97/370 (26%), Positives = 161/370 (43%), Gaps = 50/370 (13%)
Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
             I+  E+     ++V ++M A GIC SD H +        V   P++ GHE AG++E +
Sbjct: 21  FSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVS----GTLVTPLPVIAGHEAAGIVESI 76
Query: 89  GSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATP---------------- 132
           G  V T+ PGD+V       C +C  CK    N C +    + P                
Sbjct: 77  GEGVTTVRPGDKVIPLWTPQCGKCRVCKHPEGNFCLKNDL-SMPRGTMQDGTSRFTCRGK 135
Query: 133 PVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPL----------SVGL-HACRRANIGP 181
           P+H  L           + + D +S+ +     PL          S G   A + A +  
Sbjct: 136 PIHHFLGTSTFSQ----YTVVDEISVAKIDAASPLEKVCLIGCGFSTGYGSAVKVAKVTQ 191
Query: 182 ETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIA 241
            +   + G G  GL  ++G +A GA RI+ VD++  + + AKE+GA   V    N QD  
Sbjct: 192 GSTCAVFGLGGAGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECV----NPQDYK 247
Query: 242 EEVEKIQKAMGT-GIDVSFDCAGFNKTMSTALSATR-AGGKVCLVGMGHHEMTVPLTP-- 297
           + ++++   M   G+D SF+  G   TM TALS  + A G   +VG+      + + P  
Sbjct: 248 KPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDSQNLSMNPML 307
Query: 298 ---AAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARG 354
                  +  + G F+ K++ P  +    + K  + PL+TH   F  +++ E F+   R 
Sbjct: 308 LLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPF--EKINEGFDL-LRS 364
Query: 355 GTAIKVMFNL 364
           G +I+ +   
Sbjct: 365 GESIRTILTF 374

>pdb|1N8K|A Chain A, Horse Liver Alcohol Dehydrogenase Val292thr Mutant Complexed To Nad+ And Pyrazole Length = 374

Iteration: 1
 Score =  107 bits (268), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 96/370 (25%), Positives = 161/370 (43%), Gaps = 50/370 (13%)
Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
             I+  E+     ++V ++M A GIC SD H +        V   P++ GHE AG++E +
Sbjct: 21  FSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVS----GTLVTPLPVIAGHEAAGIVESI 76
Query: 89  GSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATP---------------- 132
           G  V T+ PGD+V       C +C  CK    N C +    + P                
Sbjct: 77  GEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDL-SMPRGTMQDGTSRFTCRGK 135
Query: 133 PVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPL----------SVGL-HACRRANIGP 181
           P+H  L           + + D +S+ +     PL          S G   A + A +  
Sbjct: 136 PIHHFLGTSTFSQ----YTVVDEISVAKIDAASPLEKVCLIGCGFSTGYGSAVKVAKVTQ 191
Query: 182 ETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIA 241
            +   + G G +GL  ++G +A GA RI+ VD++  + + AKE+GA   V    N QD  
Sbjct: 192 GSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECV----NPQDYK 247
Query: 242 EEVEKIQKAMGT-GIDVSFDCAGFNKTMSTALSATR-AGGKVCLVGMGHHEMTVPLTP-- 297
           + ++++   M   G+D SF+  G   TM TALS  + A G   + G+      + + P  
Sbjct: 248 KPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVITGVPPDSQNLSMNPML 307
Query: 298 ---AAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARG 354
                  +  + G F+ K++ P  +    + K  + PL+TH   F  +++ E F+   R 
Sbjct: 308 LLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPF--EKINEGFDL-LRS 364
Query: 355 GTAIKVMFNL 364
           G +I+ +   
Sbjct: 365 GESIRTILTF 374

>pdb|1AXG|A Chain A, Crystal Structure Of The Val203->ala Mutant Of Liver Alcohol Dehydrogenase Complexed With Cofactor Nad And Inhibitor Trifluoroethanol Solved To 2.5 Angstrom Resolution Length = 374

Iteration: 1
 Score =  107 bits (268), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 97/370 (26%), Positives = 161/370 (43%), Gaps = 50/370 (13%)
Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
             I+  E+     ++V ++M A GIC SD H +        V   P++ GHE AG++E +
Sbjct: 21  FSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVS----GTLVTPLPVIAGHEAAGIVESI 76
Query: 89  GSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATP---------------- 132
           G  V T+ PGD+V       C +C  CK    N C +    + P                
Sbjct: 77  GEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDL-SMPRGTMQDGTSRFTCRGK 135
Query: 133 PVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPL----------SVGL-HACRRANIGP 181
           P+H  L           + + D +S+ +     PL          S G   A + A +  
Sbjct: 136 PIHHFLGTSTFSQ----YTVVDEISVAKIDAASPLEKVCLIGCGFSTGYGSAVKVAKVTQ 191
Query: 182 ETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIA 241
            +   + G G  GL  ++G +A GA RI+ VD++  + + AKE+GA   V    N QD  
Sbjct: 192 GSTCAVFGLGGAGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECV----NPQDYK 247
Query: 242 EEVEKIQKAMGT-GIDVSFDCAGFNKTMSTALSATR-AGGKVCLVGMGHHEMTVPLTP-- 297
           + ++++   M   G+D SF+  G   TM TALS  + A G   +VG+      + + P  
Sbjct: 248 KPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDSQNLSMNPML 307
Query: 298 ---AAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARG 354
                  +  + G F+ K++ P  +    + K  + PL+TH   F  +++ E F+   R 
Sbjct: 308 LLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPF--EKINEGFDL-LRS 364
Query: 355 GTAIKVMFNL 364
           G +I+ +   
Sbjct: 365 GESIRTILTF 374

>pdb|1QLH|A Chain A, Horse Liver Alcohol Dehydrogenase Complexed To Nad Double Mutant Of Gly 293 Ala And Pro 295 Thr Length = 374

Iteration: 1
 Score =  107 bits (267), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 96/370 (25%), Positives = 161/370 (43%), Gaps = 50/370 (13%)
Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
             I+  E+     ++V ++M A GIC SD H +        V   P++ GHE AG++E +
Sbjct: 21  FSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVS----GTLVTPLPVIAGHEAAGIVESI 76
Query: 89  GSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATP---------------- 132
           G  V T+ PGD+V       C +C  CK    N C +    + P                
Sbjct: 77  GEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDL-SMPRGTMQDGTSRFTCRGK 135
Query: 133 PVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPL----------SVGL-HACRRANIGP 181
           P+H  L           + + D +S+ +     PL          S G   A + A +  
Sbjct: 136 PIHHFLGTSTFSQ----YTVVDEISVAKIDAASPLEKVCLIGCGFSTGYGSAVKVAKVTQ 191
Query: 182 ETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIA 241
            +   + G G +GL  ++G +A GA RI+ VD++  + + AKE+GA   V    N QD  
Sbjct: 192 GSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECV----NPQDYK 247
Query: 242 EEVEKIQKAMGT-GIDVSFDCAGFNKTMSTALSATR-AGGKVCLVGMGHHEMTVPLTP-- 297
           + ++++   M   G+D SF+  G   TM TALS  + A G   +V +      + + P  
Sbjct: 248 KPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVAVTPDSQNLSMNPML 307
Query: 298 ---AAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARG 354
                  +  + G F+ K++ P  +    + K  + PL+TH   F  +++ E F+   R 
Sbjct: 308 LLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPF--EKINEGFDL-LRS 364
Query: 355 GTAIKVMFNL 364
           G +I+ +   
Sbjct: 365 GESIRTILTF 374

>pdb|1HTB|A Chain A, Crystallization Of Human Beta3 Alcohol Dehydrogenase (10 MgML) IN 100 MM SODIUM PHOSPHATE (PH 7.5), 7.5 MM NAD+ And 1 Mm 4-Iodopyrazole At 25 C Length = 374

Iteration: 1
 Score =  107 bits (267), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 95/366 (25%), Positives = 158/366 (43%), Gaps = 47/366 (12%)
Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
             I+  E+     Y+V ++M AVGIC +D H +      + V   P+++GHE AG++E V
Sbjct: 21  FSIEDVEVAPPKAYEVRIKMVAVGICRTDDHVVS----GNLVTPLPVILGHEAAGIVESV 76
Query: 89  GSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPE-------------MKFFAT--PP 133
           G  V T+ PGD+V       C +C  CK    N C +              + F     P
Sbjct: 77  GEGVTTVKPGDKVIPLFTPQCGKCRVCKNPESNYCLKNDLGNPRGTLQDGTRRFTCRGKP 136
Query: 134 VHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPL----------SVGL-HACRRANIGPE 182
           +H  L           + + D  ++ +     PL          S G   A   A + P 
Sbjct: 137 IHHFLGTSTFSQ----YTVVDENAVAKIDAASPLEKVCLIGCGFSTGYGSAVNVAKVTPG 192
Query: 183 TNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAE 242
           +   + G G +GL  ++G +A GA RI+ VD++  + + AKELGA   +    N QD  +
Sbjct: 193 STCAVFGLGGVGLSAVMGCKAAGAARIIAVDINKDKFAKAKELGATECI----NPQDYKK 248
Query: 243 EVEKIQKAMGT-GIDVSFDCAG-FNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTP--- 297
            ++++ K M   G+D SF+  G  +  M++ L    A G   +VG+      + + P   
Sbjct: 249 PIQEVLKEMTDGGVDFSFEVIGRLDTMMASLLCCHEACGTSVIVGVPPASQNLSINPMLL 308
Query: 298 --AAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGG 355
                 +  V G F+ K   P  +    + K  +  L+TH   F  +++ E F+    G 
Sbjct: 309 LTGRTWKGAVYGGFKSKEGIPKLVADFMAKKFSLDALITHVLPF--EKINEGFDLLHSGK 366
Query: 356 TAIKVM 361
           +   V+
Sbjct: 367 SICTVL 372

>pdb|1HSO|A Chain A, Human Alpha Alcohol Dehydrogenase (Adh1a) Length = 374

Iteration: 1
 Score =  107 bits (267), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 93/350 (26%), Positives = 158/350 (45%), Gaps = 39/350 (11%)
Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
             I+  E+     ++V ++M AVGICG+D H +        V   P+++GHE AG++E V
Sbjct: 21  FSIEEVEVAPPKAHEVRIKMVAVGICGTDDHVVS----GTMVTPLPVILGHEAAGIVESV 76
Query: 89  GSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLC-------PE-------MKFFAT-PP 133
           G  V T+ PGD+V       C +C  CK    N C       P+        +F     P
Sbjct: 77  GEGVTTVKPGDKVIPLAIPQCGKCRICKNPESNYCLKNDVSNPQGTLQDGTSRFTCRRKP 136
Query: 134 VH-----GSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGL-HACRRANIGPETNVL 186
           +H      + +   V   +   K+     LE+  +     S G   A   A + P +   
Sbjct: 137 IHHFLGISTFSQYTVVDENAVAKIDAASPLEKVCLIGCGFSTGYGSAVNVAKVTPGSTCA 196
Query: 187 IMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEK 246
           + G G +GL  ++G +A GA RI+ VD++  + + AKELGA   +    N QD  + +++
Sbjct: 197 VFGLGGVGLSAIMGCKAAGAARIIAVDINKDKFAKAKELGATECI----NPQDYKKPIQE 252
Query: 247 IQKAMGT-GIDVSFDCAG-FNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAVR--- 301
           + K M   G+D SF+  G  +  M++ L    A G   +VG+      + + P  +    
Sbjct: 253 VLKEMTDGGVDFSFEVIGRLDTMMASLLCCHEACGTSVIVGVPPDSQNLSMNPMLLLTGR 312
Query: 302 --EVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFE 349
             +  ++G F+ K   P  +    + K  +  L+TH   F  +++ E F+
Sbjct: 313 TWKGAILGGFKSKECVPKLVADFMAKKFSLDALITHVLPF--EKINEGFD 360

>pdb|1JU9|A Chain A, Horse Liver Alcohol Dehydrogenase Val292ser Mutant Length = 374

Iteration: 1
 Score =  107 bits (266), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 96/370 (25%), Positives = 161/370 (43%), Gaps = 50/370 (13%)
Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
             I+  E+     ++V ++M A GIC SD H +        V   P++ GHE AG++E +
Sbjct: 21  FSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVS----GTLVTPLPVIAGHEAAGIVESI 76
Query: 89  GSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATP---------------- 132
           G  V T+ PGD+V       C +C  CK    N C +    + P                
Sbjct: 77  GEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDL-SMPRGTMQDGTSRFTCRGK 135
Query: 133 PVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPL----------SVGL-HACRRANIGP 181
           P+H  L           + + D +S+ +     PL          S G   A + A +  
Sbjct: 136 PIHHFLGTSTFSQ----YTVVDEISVAKIDAASPLEKVCLIGCGFSTGYGSAVKVAKVTQ 191
Query: 182 ETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIA 241
            +   + G G +GL  ++G +A GA RI+ VD++  + + AKE+GA   V    N QD  
Sbjct: 192 GSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECV----NPQDYK 247
Query: 242 EEVEKIQKAMGT-GIDVSFDCAGFNKTMSTALSATR-AGGKVCLVGMGHHEMTVPLTP-- 297
           + ++++   M   G+D SF+  G   TM TALS  + A G   + G+      + + P  
Sbjct: 248 KPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVISGVPPDSQNLSMNPML 307
Query: 298 ---AAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARG 354
                  +  + G F+ K++ P  +    + K  + PL+TH   F  +++ E F+   R 
Sbjct: 308 LLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPF--EKINEGFDL-LRS 364
Query: 355 GTAIKVMFNL 364
           G +I+ +   
Sbjct: 365 GESIRTILTF 374

>pdb|4EEZ|A Chain A, Crystal Structure Of Lactococcus Lactis Alcohol Dehydrogenase Variant Re1 Length = 348

Iteration: 1
 Score =  107 bits (266), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 85/307 (27%), Positives = 154/307 (50%), Gaps = 18/307 (5%)
Query: 35  ELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT 94
           EL ++ P + L+ M+  G+C +D+H    +   DF  K   V+GHE  G+++++G++V +
Sbjct: 20  ELRAIKPNEALLDMEYCGVCHTDLH----VAAGDFGNKAGTVLGHEGIGIVKEIGADVSS 75
Query: 95  LVPGDRVALEPGIS-CWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLP 153
           L  GDRV++      C  C++C  G    C E+K  A   V G +A + +  AD   K+P
Sbjct: 76  LQVGDRVSVAWFFEGCGHCEYCVSGNETFCREVK-NAGYSVDGGMAEEAIVVADYAVKVP 134
Query: 154 DNVSLEEGAMCEPLSVGLH-ACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIV 212
           D +   E +      V  + A + + + P    +I GAG +G + +  A+     +++ V
Sbjct: 135 DGLDPIEASSITCAGVTTYKAIKVSGVKPGDWQVIFGAGGLGNLAIQYAKNVFGAKVIAV 194
Query: 213 DVDDYRLSVAKELGADNIVKVSTNLQDI--AEEVEKIQKAMGTGIDVSFDCAGFNKTMST 270
           D++  +L++AK++GAD    V+ N  D+   +E++KI    G G+  +  CA        
Sbjct: 195 DINQDKLNLAKKIGAD----VTINSGDVNPVDEIKKITG--GLGVQSAIVCAVARIAFEQ 248
Query: 271 ALSATRAGGKVCLVGMGHHEMTVPLTPAAVREVDVVG-VFRYKNTWPLCLELLRSGKIDV 329
           A+++ +  GK+  V + + EMT+ +       V+V G +   +       +    GK  V
Sbjct: 249 AVASLKPMGKMVAVAVPNTEMTLSVPTVVFDGVEVAGSLVGTRLDLAEAFQFGAEGK--V 306
Query: 330 KPLVTHR 336
           KP+V  R
Sbjct: 307 KPIVATR 313

>pdb|1HDX|A Chain A, Three-Dimensional Structures Of Three Human Alcohol Dehydrogenase Variants: Correlations With Their Functional Differences Length = 374

Iteration: 1
 Score =  107 bits (266), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 93/354 (26%), Positives = 154/354 (43%), Gaps = 47/354 (13%)
Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
             I+  E+     Y+V ++M AVGIC +D H +      + V   P+++GHE AG++E V
Sbjct: 21  FSIEDVEVAPPKAYEVRIKMVAVGICRTDDHVVS----GNLVTPLPVILGHEAAGIVESV 76
Query: 89  GSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPE-------------MKFFAT--PP 133
           G  V T+ PGD+V       C +C  CK    N C +              + F     P
Sbjct: 77  GEGVTTVKPGDKVIPLFTPQCGKCRVCKNPESNYCLKNDLGNPRGTLQDGTRRFTCRGKP 136
Query: 134 VHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPL----------SVGL-HACRRANIGPE 182
           +H  L           + + D  ++ +     PL          S G   A   A + P 
Sbjct: 137 IHHFLGTSTFSQ----YTVVDENAVAKIDAASPLEKVCLIGCGFSTGYGSAVNVAKVTPG 192
Query: 183 TNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAE 242
           +   + G G +GL  ++G +A GA RI+ VD++  + + AKELGA   +    N QD  +
Sbjct: 193 STCAVFGLGGVGLSAVMGCKAAGAARIIAVDINKDKFAKAKELGATECI----NPQDYKK 248
Query: 243 EVEKIQKAMGT-GIDVSFDCAG-FNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTP--- 297
            ++++ K M   G+D SF+  G  +  M++ L    A G   +VG+      + + P   
Sbjct: 249 PIQEVLKEMTDGGVDFSFEVIGRLDTMMASLLCCHEACGTSVIVGVPPASQNLSINPMLL 308
Query: 298 --AAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFE 349
                 +  V G F+ K   P  +    + K  +  L+TH   F  +++ E F+
Sbjct: 309 LTGRTWKGAVYGGFKSKEGIPKLVADFMAKKFSLDALITHVLPF--EKINEGFD 360

>pdb|1HDY|A Chain A, Three-Dimensional Structures Of Three Human Alcohol Dehydrogenase Variants: Correlations With Their Functional Differences Length = 374

Iteration: 1
 Score =  107 bits (266), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 93/354 (26%), Positives = 154/354 (43%), Gaps = 47/354 (13%)
Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
             I+  E+     Y+V ++M AVGIC +D H +      + V   P+++GHE AG++E V
Sbjct: 21  FSIEDVEVAPPKAYEVRIKMVAVGICHTDDHVVS----GNLVTPLPVILGHEAAGIVESV 76
Query: 89  GSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPE-------------MKFFAT--PP 133
           G  V T+ PGD+V       C +C  CK    N C +              + F     P
Sbjct: 77  GEGVTTVKPGDKVIPLFTPQCGKCRVCKNPESNYCLKNDLGNPRGTLQDGTRRFTCRGKP 136
Query: 134 VHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPL----------SVGL-HACRRANIGPE 182
           +H  L           + + D  ++ +     PL          S G   A   A + P 
Sbjct: 137 IHHFLGTSTFSQ----YTVVDENAVAKIDAASPLEKVCLIGCGFSTGYGSAVNVAKVTPG 192
Query: 183 TNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAE 242
           +   + G G +GL  ++G +A GA RI+ VD++  + + AKELGA   +    N QD  +
Sbjct: 193 STCAVFGLGGVGLSAVMGCKAAGAARIIAVDINKDKFAKAKELGATECI----NPQDYKK 248
Query: 243 EVEKIQKAMGT-GIDVSFDCAG-FNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTP--- 297
            ++++ K M   G+D SF+  G  +  M++ L    A G   +VG+      + + P   
Sbjct: 249 PIQEVLKEMTDGGVDFSFEVIGRLDTMMASLLCCHEACGTSVIVGVPPASQNLSINPMLL 308
Query: 298 --AAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFE 349
                 +  V G F+ K   P  +    + K  +  L+TH   F  +++ E F+
Sbjct: 309 LTGRTWKGAVYGGFKSKEGIPKLVADFMAKKFSLDALITHVLPF--EKINEGFD 360

>pdb|1HT0|A Chain A, Human Gamma-2 Alcohol Dehydrogense Length = 374

Iteration: 1
 Score =  106 bits (264), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 93/365 (25%), Positives = 163/365 (44%), Gaps = 40/365 (10%)
Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
             I+  E+     ++V ++M A GIC SD H +      + V   P+++GHE AG++E V
Sbjct: 21  FSIEEVEVAPPKAHEVRIKMVAAGICRSDEHVVS----GNLVTPLPVILGHEAAGIVESV 76
Query: 89  GSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPE--------------MKFFAT-PP 133
           G  V T+ PGD+V       C +C  CK    N C +               +F  +  P
Sbjct: 77  GEGVTTVKPGDKVIPLFTPQCGKCRICKNPESNYCLKNDLGNPRGTLQDGTRRFTCSGKP 136
Query: 134 VH-----GSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGL-HACRRANIGPETNVL 186
           +H      + +   V   +   K+     LE+  +     S G   A + A + P +   
Sbjct: 137 IHHFVGVSTFSQYTVVDENAVAKIDAASPLEKVCLIGCGFSTGYGSAVKVAKVTPGSTCA 196
Query: 187 IMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEK 246
           + G G +GL  ++G +A GA RI+ VD++  + + AKELGA   +    N QD  + +++
Sbjct: 197 VFGLGGVGLSVVMGCKAAGAARIIAVDINKDKFAKAKELGATECI----NPQDYKKPIQE 252
Query: 247 IQKAMGT-GIDVSFDCAG-FNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTP-----AA 299
           + K M   G+D SF+  G  +  M++ L    A G   +VG+      + + P       
Sbjct: 253 VLKEMTDGGVDFSFEVIGQLDTMMASLLCCHEACGTSVIVGVPPDSQNLSINPMLLLTGR 312
Query: 300 VREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIK 359
             +  + G F+ K + P  +    + K  +  L+T+   F  +++ E F+   R G +I+
Sbjct: 313 TWKGAIFGGFKSKESVPKLVADFMAKKFSLDALITNVLPF--EKINEGFDL-LRSGKSIR 369
Query: 360 VMFNL 364
            +   
Sbjct: 370 TVLTF 374

>pdb|4EEX|A Chain A, Crystal Structure Of Lactococcus Lactis Alcohol Dehydrogenase Length = 348

Iteration: 1
 Score =  105 bits (263), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 84/307 (27%), Positives = 154/307 (50%), Gaps = 18/307 (5%)
Query: 35  ELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT 94
           EL ++ P + L+ M+  G+C +D+H    +   D+  K   V+GHE  G+++++G++V +
Sbjct: 20  ELRAIKPNEALLDMEYCGVCHTDLH----VAAGDYGNKAGTVLGHEGIGIVKEIGADVSS 75
Query: 95  LVPGDRVALEPGIS-CWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLP 153
           L  GDRV++      C  C++C  G    C E+K  A   V G +A + +  AD   K+P
Sbjct: 76  LQVGDRVSVAWFFEGCGHCEYCVSGNETFCREVKN-AGYSVDGGMAEEAIVVADYAVKVP 134
Query: 154 DNVSLEEGAMCEPLSVGLH-ACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIV 212
           D +   E +      V  + A + + + P    +I GAG +G + +  A+     +++ V
Sbjct: 135 DGLDPIEASSITCAGVTTYKAIKVSGVKPGDWQVIFGAGGLGNLAIQYAKNVFGAKVIAV 194
Query: 213 DVDDYRLSVAKELGADNIVKVSTNLQDI--AEEVEKIQKAMGTGIDVSFDCAGFNKTMST 270
           D++  +L++AK++GAD I+    N  D+   +E++KI    G G+  +  CA        
Sbjct: 195 DINQDKLNLAKKIGADVII----NSGDVNPVDEIKKITG--GLGVQSAIVCAVARIAFEQ 248
Query: 271 ALSATRAGGKVCLVGMGHHEMTVPLTPAAVREVDVVG-VFRYKNTWPLCLELLRSGKIDV 329
           A+++ +  GK+  V + + EMT+ +       V+V G +   +       +    GK  V
Sbjct: 249 AVASLKPMGKMVAVALPNTEMTLSVPTVVFDGVEVAGSLVGTRLDLAEAFQFGAEGK--V 306
Query: 330 KPLVTHR 336
           KP+V  R
Sbjct: 307 KPIVATR 313

>pdb|3FPC|A Chain A, Chimera Of Alcohol Dehydrogenase By Exchange Of The Cofactor Binding Domain Res 153-294 Of T. Brockii Adh By E. Histolytica Adh Length = 352

Iteration: 1
 Score =  105 bits (263), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 101/340 (29%), Positives = 147/340 (43%), Gaps = 49/340 (14%)
Query: 35  ELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT 94
           E P+ GP+D +VR  AV  C SD+H   T+       +  M++GHE  G + +VGSEVK 
Sbjct: 18  EKPAPGPFDAIVRPLAVAPCTSDIH---TVFEGAIGERHNMILGHEAVGEVVEVGSEVKD 74
Query: 95  LVPGDRVALEPGISCWRCDHCKGGRYNLCPEM----KFFATPP-VHGSLANQVVHPADLC 149
             PGDRV +      WR    + G +     M    KF      V G   +  V+ AD+ 
Sbjct: 75  FKPGDRVVVPAITPDWRTSEVQRGYHQHSGGMLAGWKFSNVKDGVFGEFFH--VNDADMN 132
Query: 150 F-KLPDNVSLEEGAMC-EPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAP 207
              LP  + LE   M  + ++ G H    ANI     V ++G GP+GL+++ GA   GA 
Sbjct: 133 LAHLPKEIPLEAAVMIPDMMTTGFHGAELANIKLGDTVCVIGIGPVGLMSVAGANHLGAG 192
Query: 208 RIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKT 267
           RI  V    +   +A E GA +I+       DI E++ K     G G+D      G   T
Sbjct: 193 RIFAVGSRKHCCDIALEYGATDIINYKNG--DIVEQILKATD--GKGVDKVVIAGGDVHT 248
Query: 268 MSTALSATRAGGKV------------------CLVGMGHHEMTVPLTPAAVREVDVVGVF 309
            + A+   + G  +                    VGMGH  +   L P         G  
Sbjct: 249 FAQAVKMIKPGSDIGNVNYLGEGDNIDIPRSEWGVGMGHKHIHGGLCPG--------GRL 300
Query: 310 RYKNTWPLCLELLRSGKIDVKPLVTHRF-GFSQKEVEEAF 348
           R +      ++L+   ++D   LVTH F GF    +E+AF
Sbjct: 301 RMER----LIDLVFYKRVDPSKLVTHVFRGFDN--IEKAF 334

>pdb|2XAA|A Chain A, Alcohol Dehydrogenase Adh-'a' From Rhodococcus Ruber Dsm 44541 At Ph 8.5 In Complex With Nad And Butane-1,4-Diol Length = 345

Iteration: 1
 Score =  105 bits (262), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 93/335 (27%), Positives = 146/335 (43%), Gaps = 33/335 (9%)
Query: 37  PSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLV 96
           P+ GP ++L+++ A G+C SD+ ++  +  A +    P+ +GHE  G + ++G  V    
Sbjct: 21  PTPGPGEILLKVTAAGLCHSDI-FVMDMPAAQYAYGLPLTLGHEGVGTVAELGEGVTGFG 79
Query: 97  PGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFA-TPPVHGSLANQ----VVHPADLCFK 151
            GD VA+     C  C  C  GR N C        TPP  GS  +     +V  A     
Sbjct: 80  VGDAVAVYGPWGCGACHACARGRENYCTRAADLGITPPGLGSPGSMAEYMIVDSARHLVP 139
Query: 152 LPDNVSLEEGAMCEPLSVGLHACRRAN--IGPETNVLIMGAGPIGLVTMLGARAFGAPRI 209
           + D   +    + +      HA  R    +GP +  +++G G +G V +   RA  A R+
Sbjct: 140 IGDLDPVAAAPLTDAGLTPYHAISRVLPLLGPGSTAVVIGVGGLGHVGIQILRAVSAARV 199
Query: 210 VIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMS 269
           + VD+DD RL++A+E+GAD  VK      D   E+       G G    FD  G   T+ 
Sbjct: 200 IAVDLDDDRLALAREVGADAAVKSGAGAADAIRELTG-----GQGATAVFDFVGAQSTID 254
Query: 270 TALSATRAGGKVCLVGM---GHHEMTVPLTPAAVREVDVVGVFRYKNTWPLCLE---LLR 323
           TA       G + +VG+    H ++   + P     V       Y  T    +E   L R
Sbjct: 255 TAQQVVAVDGHISVVGIHAGAHAKVGFFMIPFGASVVT-----PYWGTRSELMEVVALAR 309
Query: 324 SGKIDVKPLVTHRFGFSQKEVEEAF----ETSARG 354
           +G++D+     H   F+  E   A+    E S RG
Sbjct: 310 AGRLDI-----HTETFTLDEGPAAYRRLREGSIRG 339

>pdb|1LLU|A Chain A, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol Dehydrogenase With Its Coenzyme And Weak Substrate Length = 342

Iteration: 1
 Score =  105 bits (261), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 88/285 (30%), Positives = 138/285 (48%), Gaps = 20/285 (7%)
Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPM--VIGHECAGVIE 86
           L+I+  ++P  GP  VLV+++A G+C +D+H  +     D+ VK P+  + GHE  G + 
Sbjct: 19  LRIEEVKVPLPGPGQVLVKIEASGVCHTDLHAAE----GDWPVKPPLPFIPGHEGVGYVA 74
Query: 87  KVGSEVKTLVPGDRVALEPGI--SCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVH 144
            VGS V  +  GDRV + P +  +C  C+HC  G   LC E +      V+G  A  V+ 
Sbjct: 75  AVGSGVTRVKEGDRVGI-PWLYTACGCCEHCLTGWETLC-ESQQNTGYSVNGGYAEYVLA 132
Query: 145 PADLCFKLPDNVSLEEGA--MCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGAR 202
             +    LP NV   E A  +C  ++V     ++ N  P   V I G G +G V +  AR
Sbjct: 133 DPNYVGILPKNVEFAEIAPILCAGVTV-YKGLKQTNARPGQWVAISGIGGLGHVAVQYAR 191
Query: 203 AFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCA 262
           A G   +  +D+DD +L +A++LGA   V          + VE IQ+ +G G       A
Sbjct: 192 AMGL-HVAAIDIDDAKLELARKLGASLTVNARQE-----DPVEAIQRDIG-GAHGVLVTA 244
Query: 263 GFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAVREVDVVG 307
             N     A+   R GG + LVG+   +   P+    ++ + + G
Sbjct: 245 VSNSAFGQAIGMARRGGTIALVGLPPGDFPTPIFDVVLKGLHIAG 289

>pdb|1PED|A Chain A, Bacterial Secondary Alcohol Dehydrogenase (Apo-Form) Length = 351

Iteration: 1
 Score =  103 bits (258), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 101/352 (28%), Positives = 158/352 (44%), Gaps = 49/352 (13%)
Query: 23  LLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECA 82
           +LG+N L     E P  G YD +VR  AV  C SD+H +      D   ++ M++GHE  
Sbjct: 6   MLGINKLGWIEKERPVAGSYDAIVRPLAVSPCTSDIHTVFEGALGD---RKNMILGHEAV 62
Query: 83  GVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEM----KFFATPP-VHGS 137
           G + +VGSEVK   PGDRV +      WR    + G       M    KF      V G 
Sbjct: 63  GEVVEVGSEVKDFKPGDRVIVPCTTPDWRSLEVQAGFQQHSNGMLAGWKFSNFKDGVFGE 122
Query: 138 LANQVVHPADLCFK-LPDNVSLEEGAM-CEPLSVGLHACRRANIGPETNVLIMGAGPIGL 195
             +  V+ AD+    LP ++ LE   M  + ++ G H    A+I   ++V+++G G +GL
Sbjct: 123 YFH--VNDADMNLAILPKDMPLENAVMITDMMTTGFHGAELADIQMGSSVVVIGIGAVGL 180
Query: 196 VTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGI 255
           + + GA+  GA RI+ V      +  AK  GA +I+        I ++V K+    G G+
Sbjct: 181 MGIAGAKLRGAGRIIGVGSRPICVEAAKFYGATDILNYKNG--HIVDQVMKLTN--GKGV 236
Query: 256 DVSFDCAGFNKTMSTALSATRAGGKVCLV------------------GMGHHEMTVPLTP 297
           D      G ++T+S A+S  + GG +  +                  GM H  +   L P
Sbjct: 237 DRVIMAGGGSETLSQAVSMVKPGGIISNINYHGSGDALLIPRVEWGCGMAHKTIKGGLCP 296
Query: 298 AAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRF-GFSQKEVEEAF 348
                    G  R +    +  +++   ++D+  LVTH + GF    +EEA 
Sbjct: 297 G--------GRLRAE----MLRDMVVYNRVDLSKLVTHVYHGFDH--IEEAL 334

>pdb|2B83|A Chain A, A Single Amino Acid Substitution In The Clostridium Beijerinckii Alcohol Dehydrogenase Is Critical For Thermostabilization Length = 351

Iteration: 1
 Score =  103 bits (257), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 100/352 (28%), Positives = 158/352 (44%), Gaps = 49/352 (13%)
Query: 23  LLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECA 82
           +LG+N L     E P  G YD +VR  AV  C SD+H +      D   ++ M++GHE  
Sbjct: 6   MLGINKLGWIEKERPVAGSYDAIVRPLAVSPCTSDIHTVFEGALGD---RKNMILGHEAV 62
Query: 83  GVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGG----RYNLCPEMKFFATPP-VHGS 137
           G + +VGSEVK   PGDRV +      WR    + G       +    KF      V G 
Sbjct: 63  GEVVEVGSEVKDFKPGDRVIVPCTTPDWRSLEVQAGFPQHSNGMLAGWKFSNFKDGVFGE 122
Query: 138 LANQVVHPADLCFK-LPDNVSLEEGAM-CEPLSVGLHACRRANIGPETNVLIMGAGPIGL 195
             +  V+ AD+    LP ++ LE   M  + ++ G H    A+I   ++V+++G G +GL
Sbjct: 123 YFH--VNDADMNLAILPKDMPLENAVMITDMMTTGFHGAELADIQMGSSVVVIGIGAVGL 180
Query: 196 VTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGI 255
           + + GA+  GA RI+ V      +  AK  GA +I+        I ++V K+    G G+
Sbjct: 181 MGIAGAKLRGAGRIIGVGSRPICVEAAKFYGATDILNYKNG--HIVDQVMKLTN--GKGV 236
Query: 256 DVSFDCAGFNKTMSTALSATRAGGKVCLV------------------GMGHHEMTVPLTP 297
           D      G ++T+S A+S  + GG +  +                  GM H  +   L P
Sbjct: 237 DRVIMAGGGSETLSQAVSMVKPGGIISNINYHGSGDALLIPRVEWGCGMAHKTIKGGLCP 296
Query: 298 AAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRF-GFSQKEVEEAF 348
                    G  R +    +  +++   ++D+  LVTH + GF    +EEA 
Sbjct: 297 G--------GRLRAE----MLRDMVVYNRVDLSKLVTHVYHGFDH--IEEAL 334

>pdb|3FSR|A Chain A, Chimera Of Alcohol Dehydrogenase By Exchange Of The Cofactor Binding Domain Res 153-295 Of T. Brockii Adh By C. Beijerinckii Adh Length = 352

Iteration: 1
 Score =  103 bits (256), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 99/340 (29%), Positives = 153/340 (45%), Gaps = 49/340 (14%)
Query: 35  ELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT 94
           E P+ GP+D +VR  AV  C SD+H   T+       +  M++GHE  G + +VGSEVK 
Sbjct: 18  EKPAPGPFDAIVRPLAVAPCTSDIH---TVFEGAIGERHNMILGHEAVGEVVEVGSEVKD 74
Query: 95  LVPGDRVALEPGISCWRCDHCKGGRYNLCPEM----KFFATPP-VHGSLANQVVHPADLC 149
             PGDRV +      WR    + G +     M    KF      V G   +  V+ AD+ 
Sbjct: 75  FKPGDRVVVPAITPDWRTSEVQRGYHQHSGGMLAGWKFSNVKDGVFGEFFH--VNDADMN 132
Query: 150 F-KLPDNVSLEEGAMC-EPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAP 207
              LP  + LE   M  + ++ G H    A+I   ++V+++G G +GL+ + GA+  GA 
Sbjct: 133 LAHLPKEIPLEAAVMIPDMMTTGFHGAELADIQMGSSVVVIGIGAVGLMGIAGAKLRGAG 192
Query: 208 RIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKT 267
           RI+ V      +  AK  GA +I+        I ++V K+    G G+D      G ++T
Sbjct: 193 RIIGVGSRPICVEAAKFYGATDILNYKNG--HIVDQVMKLTN--GKGVDRVIMAGGGSET 248
Query: 268 MSTALSATRAGGKVCLV------------------GMGHHEMTVPLTPAAVREVDVVGVF 309
           +S A+S  + GG +  +                  GM H  +   L P         G  
Sbjct: 249 LSQAVSMVKPGGIISNINYHGSGDALLIPRVEWGCGMAHKTIKGGLCPG--------GRL 300
Query: 310 RYKNTWPLCLELLRSGKIDVKPLVTHRF-GFSQKEVEEAF 348
           R +      ++L+   ++D   LVTH F GF    +E+AF
Sbjct: 301 RMER----LIDLVFYKRVDPSKLVTHVFRGFDN--IEKAF 334

>pdb|3COS|A Chain A, Crystal Structure Of Human Class Ii Alcohol Dehydrogenase (Adh4) In Complex With Nad And Zn Length = 381

Iteration: 1
 Score =  102 bits (254), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 95/369 (25%), Positives = 165/369 (44%), Gaps = 47/369 (12%)
Query: 21  AWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHE 80
           AW  G   L I+  E+     ++V +++ A  +C +D   + +       +  P+++GHE
Sbjct: 16  AWEAG-KPLCIEEVEVAPPKAHEVRIQIIATSLCHTDATVIDSKFEG---LAFPVIVGHE 71
Query: 81  CAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATP-------- 132
            AG++E +G  V  + PGD+V       C +C  C     NLC ++    +P        
Sbjct: 72  AAGIVESIGPGVTNVKPGDKVIPLYAPLCRKCKFCLSPLTNLCGKISNLKSPASDQQLME 131
Query: 133 -----------PVH----GSLANQVVHPADLCF-KLPDNVSLEEGAMCEPLSVGLH---- 172
                      PV+     S  +Q    +D+   K+ D+ +LE   +   L  G      
Sbjct: 132 DKTSRFTCKGKPVYHFFGTSTFSQYTVVSDINLAKIDDDANLERVCL---LGCGFSTGYG 188
Query: 173 -ACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIV 231
            A   A + P +   + G G +GL  ++G +A GA RI+ +D++  +   AK LGA + +
Sbjct: 189 AAINNAKVTPGSTCAVFGLGGVGLSAVMGCKAAGASRIIGIDINSEKFVKAKALGATDCL 248
Query: 232 KVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCL---VGMGH 288
                 + I E + ++ K    G+D + DCAG ++TM  AL  T AG   C    V  G 
Sbjct: 249 NPRDLHKPIQEVIIELTKG---GVDFALDCAGGSETMKAALDCTTAGWGSCTFIGVAAGS 305
Query: 289 HEMTV-PLTPAAVREVD--VVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVE 345
             +TV P      R ++    G ++  ++ P  +   ++ K ++  LVTH   F +  + 
Sbjct: 306 KGLTVFPEELIIGRTINGTFFGGWKSVDSIPKLVTDYKNKKFNLDALVTHTLPFDK--IS 363
Query: 346 EAFETSARG 354
           EAF+   +G
Sbjct: 364 EAFDLMNQG 372

>pdb|1Y9A|A Chain A, Alcohol Dehydrogenase From Entamoeba Histolotica In Complex With Cacodylate Length = 360

Iteration: 1
 Score =  102 bits (253), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 97/350 (27%), Positives = 150/350 (42%), Gaps = 45/350 (12%)
Query: 23  LLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECA 82
           +LG+  +     ++P  GP D LVR  A+  C SD H +      D   +  M++GHE  
Sbjct: 6   MLGIGRIGWIEKKIPECGPLDALVRPLALAPCTSDTHTVWAGAIGD---RHDMILGHEAV 62
Query: 83  GVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGR-YNLCPEMKFFATPPVHGSLANQ 141
           G I KVGS VK L  GD+V +      W  +  + G   +    +  +        + ++
Sbjct: 63  GQIVKVGSLVKRLKVGDKVIVPAITPDWGEEESQRGYPMHSGGMLGGWKFSNFKDGVFSE 122
Query: 142 VVH----PADLCFKLPDNVSLEEGAMCEPL-SVGLHACRRANIGPETNVLIMGAGPIGLV 196
           V H     A+L   LP ++  E+  M   + + G H    ANI     V ++G GP+GL+
Sbjct: 123 VFHVNEADANLAL-LPRDIKPEDAVMLSDMVTTGFHGAELANIKLGDTVCVIGIGPVGLM 181
Query: 197 TMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGID 256
           ++ GA   GA RI  V    +   +A E GA +I+       DI E++  ++   G G+D
Sbjct: 182 SVAGANHLGAGRIFAVGSRKHCCDIALEYGATDIINYKNG--DIVEQI--LKATDGKGVD 237
Query: 257 VSFDCAGFNKTMSTALSATRAGGKV------------------CLVGMGHHEMTVPLTPA 298
                 G   T + A+   + G  +                    VGMGH  +   LTP 
Sbjct: 238 KVVIAGGXVHTFAQAVKMIKPGSDIGNVNYLGEGDNIDIPRSEWGVGMGHKHIHGGLTPG 297
Query: 299 AVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAF 348
                   G  R +        L+ +GK+D   L+THRF   +K VE+A 
Sbjct: 298 --------GRVRMEK----LASLISTGKLDTSKLITHRFEGLEK-VEDAL 334

>pdb|3MEQ|A Chain A, Crystal Structure Of Alcohol Dehydrogenase From Brucella Mel Length = 365

Iteration: 1
 Score =  101 bits (252), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 84/264 (31%), Positives = 123/264 (46%), Gaps = 18/264 (6%)
Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKE--PMVIGHECAGVIE 86
           L I    +P  GP  + V ++A G+C +D+H  +     D+ VK   P + GHE  G + 
Sbjct: 38  LTIDEVPIPQPGPGQIQVAIQASGVCHTDLHAAE----GDWPVKPNPPFIPGHEGVGFVS 93
Query: 87  KVGSEVKTLVPGDRVALEPGI--SCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVH 144
            VGS VK +  GDRV + P +  +C  C HC GG   LC E +      V+G  A  VV 
Sbjct: 94  AVGSGVKHVKEGDRVGI-PWLYTACGHCRHCLGGWETLCEE-QLNTGYSVNGGFAEYVVA 151
Query: 145 PADLCFKLPDNVSLEEGA--MCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGAR 202
             +    LP N+   E A  +C  ++V     +  +  P   V+I G G +G + +  AR
Sbjct: 152 DPNFVGHLPKNIDFNEIAPVLCAGVTV-YKGLKVTDTKPGDWVVISGIGGLGHMAVQYAR 210
Query: 203 AFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCA 262
           A G   +  VD+DD +L +A+ LGA     V+ N + +A+    I+K    G       A
Sbjct: 211 AMGL-NVAAVDIDDRKLDLARRLGA----TVTVNAKTVADPAAYIRKETDGGAQGVLVTA 265
Query: 263 GFNKTMSTALSATRAGGKVCLVGM 286
              K    AL     GG V L G+
Sbjct: 266 VSPKAFEQALGMVARGGTVSLNGL 289

>pdb|3FTN|A Chain A, Q165eS254K DOUBLE MUTANT CHIMERA OF ALCOHOL DEHYDROGENASE BY EXCHANGE Of The Cofactor Binding Domain Res 153-295 Of T. Brockii Adh By C. Beijerinckii Adh Length = 352

Iteration: 1
 Score =  101 bits (251), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 98/340 (28%), Positives = 152/340 (44%), Gaps = 49/340 (14%)
Query: 35  ELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT 94
           E P+ GP+D +VR  AV  C SD+H   T+       +  M++GHE  G + +VGSEVK 
Sbjct: 18  EKPAPGPFDAIVRPLAVAPCTSDIH---TVFEGAIGERHNMILGHEAVGEVVEVGSEVKD 74
Query: 95  LVPGDRVALEPGISCWRCDHCKGGRYNLCPEM----KFFATPP-VHGSLANQVVHPADLC 149
             PGDRV +      WR    + G +     M    KF      V G   +  V+ AD+ 
Sbjct: 75  FKPGDRVVVPAITPDWRTSEVQRGYHQHSGGMLAGWKFSNVKDGVFGEFFH--VNDADMN 132
Query: 150 F-KLPDNVSLEEGAMC-EPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAP 207
              LP  + LE   M  + ++ G H    A+I   ++V+++G G +GL+ + GA+  GA 
Sbjct: 133 LAHLPKEIPLEAAVMIPDMMTTGFHGAELADIEMGSSVVVIGIGAVGLMGIAGAKLRGAG 192
Query: 208 RIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKT 267
           RI+ V      +  AK  GA +I+        I ++V K+    G G+D      G ++T
Sbjct: 193 RIIGVGSRPICVEAAKFYGATDILNYKNG--HIVDQVMKLTN--GKGVDRVIMAGGGSET 248
Query: 268 MSTALSATRAGGKVCLV------------------GMGHHEMTVPLTPAAVREVDVVGVF 309
           +S A+   + GG +  +                  GM H  +   L P         G  
Sbjct: 249 LSQAVKMVKPGGIISNINYHGSGDALLIPRVEWGCGMAHKTIKGGLCPG--------GRL 300
Query: 310 RYKNTWPLCLELLRSGKIDVKPLVTHRF-GFSQKEVEEAF 348
           R +      ++L+   ++D   LVTH F GF    +E+AF
Sbjct: 301 RMER----LIDLVFYKRVDPSKLVTHVFRGFDN--IEKAF 334

>pdb|2OUI|A Chain A, D275p Mutant Of Alcohol Dehydrogenase From Protozoa Entamoeba Histolytica Length = 360

Iteration: 1
 Score =  100 bits (250), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 98/350 (28%), Positives = 149/350 (42%), Gaps = 45/350 (12%)
Query: 23  LLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECA 82
           +LG+  +     ++P  GP D LVR  A+  C SD H +      D   +  M++GHE  
Sbjct: 6   MLGIGRIGWIEKKIPECGPLDALVRPLALAPCTSDTHTVWAGAIGD---RHDMILGHEAV 62
Query: 83  GVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGR-YNLCPEMKFFATPPVHGSLANQ 141
           G I KVGS VK L  GD+V +      W  +  + G   +    +  +        + ++
Sbjct: 63  GQIVKVGSLVKRLKVGDKVIVPAITPDWGEEESQRGYPMHSGGMLGGWKFSNFKDGVFSE 122
Query: 142 VVH----PADLCFKLPDNVSLEEGAMCEPL-SVGLHACRRANIGPETNVLIMGAGPIGLV 196
           V H     A+L   LP ++  E+  M   + + G H    ANI     V ++G GP+GL+
Sbjct: 123 VFHVNEADANLAL-LPRDIKPEDAVMLSDMVTTGFHGAELANIKLGDTVCVIGIGPVGLM 181
Query: 197 TMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGID 256
           ++ GA   GA RI  V    +   +A E GA +I+       DI E++ K     G G+D
Sbjct: 182 SVAGANHLGAGRIFAVGSRKHCCDIALEYGATDIINYKNG--DIVEQILKATD--GKGVD 237
Query: 257 VSFDCAGFNKTMSTALSATRAGGKV------------------CLVGMGHHEMTVPLTPA 298
                 G   T + A+   + G  +                    VGMGH  +   LTP 
Sbjct: 238 KVVIAGGDVHTFAQAVKMIKPGSDIGNVNYLGEGDNIPIPRSEWGVGMGHKHIHGGLTPG 297
Query: 299 AVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAF 348
                   G  R +        L+ +GK+D   L+THRF   +K VE+A 
Sbjct: 298 --------GRVRMEK----LASLISTGKLDTSKLITHRFEGLEK-VEDAL 334

>pdb|1JQB|A Chain A, Alcohol Dehydrogenase From Clostridium Beijerinckii: Crystal Structure Of Mutant With Enhanced Thermal Stability Length = 351

Iteration: 1
 Score =  100 bits (249), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 100/352 (28%), Positives = 156/352 (44%), Gaps = 49/352 (13%)
Query: 23  LLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECA 82
           +LG+N L     E P  G YD +VR  AV  C SD+H +      D   ++ M++GHE  
Sbjct: 6   MLGINKLGWIEKERPVAGSYDAIVRPLAVSPCTSDIHTVFEGALGD---RKNMILGHEAV 62
Query: 83  GVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEM----KFFATPP-VHGS 137
           G + +VGSEVK   PGDRV +      WR    + G       M    KF      V G 
Sbjct: 63  GEVVEVGSEVKDFKPGDRVIVPCTTPDWRSLEVQAGFQQHSNGMLAGWKFSNFKDGVFGE 122
Query: 138 LANQVVHPADLCFK-LPDNVSLEEGAM-CEPLSVGLHACRRANIGPETNVLIMGAGPIGL 195
             +  V+ AD+    LP ++ LE   M  + ++ G H    A+I   ++V+++G G +GL
Sbjct: 123 YFH--VNDADMNLAILPKDMPLENAVMITDMMTTGFHGAELADIEMGSSVVVIGIGAVGL 180
Query: 196 VTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGI 255
           + + GA+  GA RI+ V      +  AK  GA +I+        I ++V K+    G G+
Sbjct: 181 MGIAGAKLRGAGRIIGVGSRPICVEAAKFYGATDILNYKNG--HIEDQVMKLTN--GKGV 236
Query: 256 DVSFDCAGFNKTMSTALSATRAGGKVCLV------------------GMGHHEMTVPLTP 297
           D      G ++T+S A+   + GG +  +                  GM H  +   L P
Sbjct: 237 DRVIMAGGGSETLSQAVKMVKPGGIISNINYHGSGDALLIPRVEWGCGMAHKTIKGGLCP 296
Query: 298 AAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRF-GFSQKEVEEAF 348
                    G  R +       +++   ++D+  LVTH + GF    +EEA 
Sbjct: 297 G--------GRLRAER----LRDMVVYNRVDLSKLVTHVYHGFDH--IEEAL 334

>pdb|3S1L|A Chain A, Crystal Structure Of Apo-Form Furx Length = 340

Iteration: 1
 Score = 97.8 bits (242), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 88/285 (30%), Positives = 135/285 (47%), Gaps = 20/285 (7%)
Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKE--PMVIGHECAGVIE 86
           L I    +P  GP  V V+++A G+C +D+H        D+ VK   P + GHE  G + 
Sbjct: 15  LTIDEVPVPQPGPGQVQVKIEASGVCHTDLHAAD----GDWPVKPTLPFIPGHEGVGYVS 70
Query: 87  KVGSEVKTLVPGDRVALEPGI--SCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVH 144
            VGS V  +  GDRV + P +  +C  C+HC  G   LC E +      V+G     VV 
Sbjct: 71  AVGSGVSRVKEGDRVGV-PWLYSACGYCEHCLQGWETLC-EKQQNTGYSVNGGYGEYVVA 128
Query: 145 PADLCFKLPDNVSLEEGA--MCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGAR 202
             +    LPD V   E A  +C  ++V     +  +  P   V+I G G +G V +  AR
Sbjct: 129 DPNYVGLLPDKVGFVEIAPILCAGVTV-YKGLKVTDTRPGQWVVISGIGGLGHVAVQYAR 187
Query: 203 AFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCA 262
           A G  R+  VD+DD +L++A+ LGA+    V+ N +D  +    +QK +G G       A
Sbjct: 188 AMGL-RVAAVDIDDAKLNLARRLGAE----VAVNARD-TDPAAWLQKEIG-GAHGVLVTA 240
Query: 263 GFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAVREVDVVG 307
              K  S A+   R GG + L G+   +   P+    ++ + + G
Sbjct: 241 VSPKAFSQAIGMVRRGGTIALNGLPPGDFGTPIFDVVLKGITIRG 285

>pdb|1H2B|A Chain A, Crystal Structure Of The Alcohol Dehydrogenase From The Hyperthermophilic Archaeon Aeropyrum Pernix At 1.65a Resolution Length = 359

Iteration: 1
 Score = 97.8 bits (242), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 73/266 (27%), Positives = 128/266 (48%), Gaps = 13/266 (4%)
Query: 29  LKIQPFELPSL-GPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEK 87
           L+I+  + P L G +DV+VR+   G+C +D+H ++ +       K P  +GHE  G IE+
Sbjct: 28  LRIEDVDYPRLEGRFDVIVRIAGAGVCHTDLHLVQGMWHELLQPKLPYTLGHENVGYIEE 87
Query: 88  VGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPAD 147
           V   V+ L  GD V L P ++   C  C+ G    C  ++F     + G  A  +     
Sbjct: 88  VAEGVEGLEKGDPVILHPAVTDGTCLACRAGEDMHCENLEFPGL-NIDGGFAEFMRTSHR 146
Query: 148 LCFKLPDNVSLEEGAMCEPLS-VGLHACRRA-----NIGPETNVLIMGAGPIGLVTMLGA 201
              KLP ++S E+     PL+  G+ A R        + P   V I+G G +G + +   
Sbjct: 147 SVIKLPKDISREKLVEMAPLADAGITAYRAVKKAARTLYPGAYVAIVGVGGLGHIAVQLL 206
Query: 202 RAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDC 261
           +      ++ +DV + +L +A+ LGAD++V      +D  ++V ++ +  G G++V+ D 
Sbjct: 207 KVMTPATVIALDVKEEKLKLAERLGADHVVDAR---RDPVKQVMELTR--GRGVNVAMDF 261
Query: 262 AGFNKTMSTALSATRAGGKVCLVGMG 287
            G   T+          G++ +VG G
Sbjct: 262 VGSQATVDYTPYLLGRMGRLIIVGYG 287

>pdb|1VJ0|A Chain A, Crystal Structure Of Alcohol Dehydrogenase (Tm0436) From Thermotoga Maritima At 2.00 A Resolution Length = 380

Iteration: 1
 Score = 97.4 bits (241), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 88/310 (28%), Positives = 144/310 (46%), Gaps = 37/310 (11%)
Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
           L  + FE+  +    +LV + + G+CGSDVH     R  D  V  P+++GHE AG + +V
Sbjct: 30  LVYKEFEISDIPRGSILVEILSAGVCGSDVH---MFRGEDPRVPLPIILGHEGAGRVVEV 86
Query: 89  GSEVKTL-----VPGDRVALEPGISCWRCDHCKGGRY-NLCPEMKFFAT-------PPVH 135
             E + L      PGD +    GI+C  C  CK  +   LCP  K +         P + 
Sbjct: 87  NGEKRDLNGELLKPGDLIVWNRGITCGECYWCKVSKEPYLCPNRKVYGINRGCSEYPHLR 146
Query: 136 GSLANQVV-HPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPET----NVLIMGA 190
           G  ++ +V  P     K+ +   L+  AM   +  G  A    +  PE+     V+I GA
Sbjct: 147 GCYSSHIVLDPETDVLKVSEKDDLDVLAMA--MCSGATAYHAFDEYPESFAGKTVVIQGA 204
Query: 191 GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKA 250
           GP+GL  ++ AR+ GA  ++++     RL +A+E+GAD    ++ N ++ +  VE+ +KA
Sbjct: 205 GPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEEIGAD----LTLNRRETS--VEERRKA 258
Query: 251 M-----GTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAVREVDV 305
           +     G G D   +  G ++ +       R GG   + G+   +  VP     V E  V
Sbjct: 259 IMDITHGRGADFILEATGDSRALLEGSELLRRGGFYSVAGVAVPQDPVPFK---VYEWLV 315
Query: 306 VGVFRYKNTW 315
           +    +K  W
Sbjct: 316 LKNATFKGIW 325

>pdb|1R37|A Chain A, Alcohol Dehydrogenase From Sulfolobus Solfataricus Complexed With Nad(H) And 2-Ethoxyethanol Length = 347

Iteration: 1
 Score = 97.1 bits (240), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 94/330 (28%), Positives = 153/330 (46%), Gaps = 17/330 (5%)
Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLK----TLRCA-DFVVKEPMVIGHECAG 83
           L +Q   +P      VL++++A G+C SDVH  +     LR   D  VK P+ +GHE AG
Sbjct: 13  LSLQEIGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHEIAG 72
Query: 84  VIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVV 143
            IE+VG EV     GD VA+ P      C +C+ G  +LC   ++       G+ A  V+
Sbjct: 73  KIEEVGDEVVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPRWLGI-NFDGAYAEYVI 131
Query: 144 HP-ADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGP-ETNVLIMGAGPIGLVTMLGA 201
            P     +KL    ++E   +         A R+A++ P +T +++   G +G + +  A
Sbjct: 132 VPHYKYMYKLRRLNAVEAAPLTCSGITTYRAVRKASLDPTKTLLVVGAGGGLGTMAVQIA 191
Query: 202 RAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDC 261
           +A     I+ VDV +  +  AK  GAD ++  S  +QD   E+ +I ++   G+D   D 
Sbjct: 192 KAVSGATIIGVDVREEAVEAAKRAGADYVINAS--MQDPLAEIRRITES--KGVDAVIDL 247
Query: 262 AGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKNTWPL-CLE 320
               KT+S    A    GK  +VG+   ++        + E+  VG      +  L  + 
Sbjct: 248 NNSEKTLSVYPKALAKQGKYVMVGLFGADLHYHAPLITLSEIQFVGSLVGNQSDFLGIMR 307
Query: 321 LLRSGKIDVKPLVTHRFGFSQKEVEEAFET 350
           L  +GK  VKP++T       +E  EA + 
Sbjct: 308 LAEAGK--VKPMITKTMKL--EEANEAIDN 333

>pdb|1NTO|A Chain A, N249y Mutant Of Alcohol Dehydrogenase From The Archaeon Sulfolobus Solfataricus-Monoclinic Crystal Form Length = 347

Iteration: 1
 Score = 95.9 bits (237), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 94/330 (28%), Positives = 153/330 (46%), Gaps = 17/330 (5%)
Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLK----TLRCA-DFVVKEPMVIGHECAG 83
           L +Q   +P      VL++++A G+C SDVH  +     LR   D  VK P+ +GHE AG
Sbjct: 13  LSLQEIGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHEIAG 72
Query: 84  VIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVV 143
            IE+VG EV     GD VA+ P      C +C+ G  +LC   ++       G+ A  V+
Sbjct: 73  KIEEVGDEVVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPRWLGI-NFDGAYAEYVI 131
Query: 144 HP-ADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGP-ETNVLIMGAGPIGLVTMLGA 201
            P     +KL    ++E   +         A R+A++ P +T +++   G +G + +  A
Sbjct: 132 VPHYKYMYKLRRLNAVEAAPLTCSGITTYRAVRKASLDPTKTLLVVGAGGGLGTMAVQIA 191
Query: 202 RAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDC 261
           +A     I+ VDV +  +  AK  GAD ++  S  +QD   E+ +I ++   G+D   D 
Sbjct: 192 KAVSGATIIGVDVREEAVEAAKRAGADYVINAS--MQDPLAEIRRITES--KGVDAVIDL 247
Query: 262 AGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKNTWPL-CLE 320
               KT+S    A    GK  +VG+   ++        + E+  VG      +  L  + 
Sbjct: 248 NYSEKTLSVYPKALAKQGKYVMVGLFGADLHYHAPLITLSEIQFVGSLVGNQSDFLGIMR 307
Query: 321 LLRSGKIDVKPLVTHRFGFSQKEVEEAFET 350
           L  +GK  VKP++T       +E  EA + 
Sbjct: 308 LAEAGK--VKPMITKTMKL--EEANEAIDN 333

>pdb|3I4C|A Chain A, Crystal Structure Of Sulfolobus Solfataricus Adh(Ssadh) Double Mutant (W95l,N249y) Length = 347

Iteration: 1
 Score = 95.1 bits (235), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 94/330 (28%), Positives = 153/330 (46%), Gaps = 17/330 (5%)
Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLK----TLRCA-DFVVKEPMVIGHECAG 83
           L +Q   +P      VL++++A G+C SDVH  +     LR   D  VK P+ +GHE AG
Sbjct: 13  LSLQEIGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHEIAG 72
Query: 84  VIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVV 143
            IE+VG EV     GD VA+ P      C +C+ G  +LC   ++       G+ A  V+
Sbjct: 73  KIEEVGDEVVGYSKGDLVAVNPLQGEGNCYYCRIGEEHLCDSPRWLGI-NFDGAYAEYVI 131
Query: 144 HP-ADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGP-ETNVLIMGAGPIGLVTMLGA 201
            P     +KL    ++E   +         A R+A++ P +T +++   G +G + +  A
Sbjct: 132 VPHYKYMYKLRRLNAVEAAPLTCSGITTYRAVRKASLDPTKTLLVVGAGGGLGTMAVQIA 191
Query: 202 RAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDC 261
           +A     I+ VDV +  +  AK  GAD ++  S  +QD   E+ +I ++   G+D   D 
Sbjct: 192 KAVSGATIIGVDVREEAVEAAKRAGADYVINAS--MQDPLAEIRRITES--KGVDAVIDL 247
Query: 262 AGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKNTWPL-CLE 320
               KT+S    A    GK  +VG+   ++        + E+  VG      +  L  + 
Sbjct: 248 NYSEKTLSVYPKALAKQGKYVMVGLFGADLHYHAPLITLSEIQFVGSLVGNQSDFLGIMR 307
Query: 321 LLRSGKIDVKPLVTHRFGFSQKEVEEAFET 350
           L  +GK  VKP++T       +E  EA + 
Sbjct: 308 LAEAGK--VKPMITKTMKL--EEANEAIDN 333

>pdb|1JVB|A Chain A, Alcohol Dehydrogenase From The Archaeon Sulfolobus Solfataricus Length = 347

Iteration: 1
 Score = 91.7 bits (226), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 91/314 (28%), Positives = 145/314 (46%), Gaps = 15/314 (4%)
Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLK----TLRCA-DFVVKEPMVIGHECAG 83
           L +Q   +P      VL++++A G+C SDVH  +     LR   D  VK P+ +GHE AG
Sbjct: 13  LSLQEIGVPKPKGPQVLIKVEAAGVCHSDVHXRQGRFGNLRIVEDLGVKLPVTLGHEIAG 72
Query: 84  VIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVV 143
            IE+VG EV     GD VA+ P      C +C+ G  +LC   ++       G+ A  V+
Sbjct: 73  KIEEVGDEVVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPRWLGI-NFDGAYAEYVI 131
Query: 144 HP-ADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGP-ETNVLIMGAGPIGLVTMLGA 201
            P     +KL    ++E   +         A R+A++ P +T +++   G +G   +  A
Sbjct: 132 VPHYKYXYKLRRLNAVEAAPLTCSGITTYRAVRKASLDPTKTLLVVGAGGGLGTXAVQIA 191
Query: 202 RAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDC 261
           +A     I+ VDV +  +  AK  GAD ++  S  +QD   E+ +I ++   G+D   D 
Sbjct: 192 KAVSGATIIGVDVREEAVEAAKRAGADYVINAS--MQDPLAEIRRITES--KGVDAVIDL 247
Query: 262 AGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKNTWPLCL-E 320
               KT+S    A    GK   VG+   ++        + E+  VG      +  L +  
Sbjct: 248 NNSEKTLSVYPKALAKQGKYVXVGLFGADLHYHAPLITLSEIQFVGSLVGNQSDFLGIXR 307
Query: 321 LLRSGKIDVKPLVT 334
           L  +GK  VKP +T
Sbjct: 308 LAEAGK--VKPXIT 319

>pdb|1F8F|A Chain A, Crystal Structure Of Benzyl Alcohol Dehydrogenase From Acinetobacter Calcoaceticus Length = 371

Iteration: 1
 Score = 91.3 bits (225), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 75/274 (27%), Positives = 122/274 (44%), Gaps = 48/274 (17%)
Query: 43  DVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVA 102
           +VLV++ A G+C +D+     +R   + V  P V+GHE +G+IE +G  V  L  GD V 
Sbjct: 33  EVLVKVVATGMCHTDL----IVRDQKYPVPLPAVLGHEGSGIIEAIGPNVTELQVGDHVV 88
Query: 103 LEPGISCWRCDHCKGGRYNLCPEM--------------------------KFFATPPVHG 136
           L  G  C +C  C  G    C E                            FFA      
Sbjct: 89  LSYGY-CGKCTQCNTGNPAYCSEFFGRNFSGADSEGNHALCTHDQGVVNDHFFA----QS 143
Query: 137 SLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLH----ACRRA-NIGPETNVLIMGAG 191
           S A   +   +   K+  +V +E   +  PL  G+     AC  A  + P ++ +  GAG
Sbjct: 144 SFATYALSRENNTVKVTKDVPIE---LLGPLGCGIQTGAGACINALKVTPASSFVTWGAG 200
Query: 192 PIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAM 251
            +GL  +L A+  GA  I+ VD+ + RL +AK+LGA +++   T      + V  I++  
Sbjct: 201 AVGLSALLAAKVCGASIIIAVDIVESRLELAKQLGATHVINSKTQ-----DPVAAIKEIT 255
Query: 252 GTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVG 285
             G++ + +  G  + +   + A    GK+ +VG
Sbjct: 256 DGGVNFALESTGSPEILKQGVDALGILGKIAVVG 289

>pdb|3UKO|A Chain A, Crystal Structure Of S-Nitrosoglutathione Reductase From Arabidopsis Thaliana, Complex With Nadh Length = 378

Iteration: 1
 Score = 90.9 bits (224), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 87/340 (25%), Positives = 140/340 (41%), Gaps = 45/340 (13%)
Query: 43  DVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVA 102
           +V +++    +C +D +   T    D     P ++GHE AG++E VG  V  +  GD V 
Sbjct: 35  EVRIKILYTALCHTDAY---TWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQAGDHVI 91
Query: 103 LEPGISCWRCDHCKGGRYNLCPEMKF--------------FAT--PPVHGSLANQVVHPA 146
                 C  C  CK G+ NLC +++               F+    P++  +        
Sbjct: 92  PCYQAECRECKFCKSGKTNLCGKVRSATGVGIMMNDRKSRFSVNGKPIYHFMGTSTFSQ- 150
Query: 147 DLCFKLPDNVSLEEGAMCEPLS-VGLHAC----------RRANIGPETNVLIMGAGPIGL 195
              + +  +VS+ +     PL  V L  C            A + P +NV I G G +GL
Sbjct: 151 ---YTVVHDVSVAKIDPTAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSNVAIFGLGTVGL 207
Query: 196 VTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGI 255
               GA+  GA RI+ +D+D  +   AK+ G +  V    + + I E +  +      G+
Sbjct: 208 AVAEGAKTAGASRIIGIDIDSKKYETAKKFGVNEFVNPKDHDKPIQEVIVDLTDG---GV 264
Query: 256 DVSFDCAGFNKTMSTALSATRAG-GKVCLVGM---GHHEMTVP--LTPAAVREVDVVGVF 309
           D SF+C G    M  AL     G G   +VG+   G    T P  L    V +    G F
Sbjct: 265 DYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGF 324
Query: 310 RYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFE 349
           + +   P  +E   + +I V   +TH       E+ +AF+
Sbjct: 325 KSRTQVPWLVEKYMNKEIKVDEYITHNLTLG--EINKAFD 362

>pdb|3QJ5|A Chain A, S-Nitrosoglutathione Reductase (Gsnor) In Complex With N6022 Length = 374

Iteration: 1
 Score = 90.9 bits (224), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 92/367 (25%), Positives = 144/367 (39%), Gaps = 47/367 (12%)
Query: 21  AWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHE 80
           AW  G   L I+  E+     ++V +++ A  +C +D +   TL  AD     P+++GHE
Sbjct: 13  AWEAG-KPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAY---TLSGADPEGCFPVILGHE 68
Query: 81  CAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLAN 140
            AG++E VG  V  L  GD V       C  C  C   + NLC +++      +     +
Sbjct: 69  GAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLMPDGTS 128
Query: 141 QVVHPADLCFKLPDNVSLEEGAMCEPLSVGL----------------------HACRRAN 178
           +               +  E  +   +SV                         A   A 
Sbjct: 129 RFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGISTGYGAAVNTAK 188
Query: 179 IGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQ 238
           + P +   + G G +GL  ++G +  GA RI+ VD++  + + AKE GA   +    N Q
Sbjct: 189 LEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATECI----NPQ 244
Query: 239 DIAEEVEKIQKAMGT-GIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTP 297
           D ++ ++++   M   G+D SF+C G  K M  AL A   G            +      
Sbjct: 245 DFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKG----WGVSVVVGVAASGEE 300
Query: 298 AAVREVDVVGVFRYKNT----W------PLCLELLRSGKIDVKPLVTHRFGFSQKEVEEA 347
            A R   +V    +K T    W      P  +    S KI V   VTH   F   E+ +A
Sbjct: 301 IATRPFQLVTGRTWKGTAFGGWKSVESVPKLVSEYMSKKIKVDEFVTHNLSFD--EINKA 358
Query: 348 FETSARG 354
           FE    G
Sbjct: 359 FELMHSG 365

>pdb|1TEH|A Chain A, Structure Of Human Liver Chichi Alcohol Dehydrogenase (A Glutathione- Dependent Formaldehyde Dehydrogenase) Length = 373

Iteration: 1
 Score = 90.9 bits (224), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 92/367 (25%), Positives = 144/367 (39%), Gaps = 47/367 (12%)
Query: 21  AWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHE 80
           AW  G   L I+  E+     ++V +++ A  +C +D +   TL  AD     P+++GHE
Sbjct: 12  AWEAG-KPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAY---TLSGADPEGCFPVILGHE 67
Query: 81  CAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLAN 140
            AG++E VG  V  L  GD V       C  C  C   + NLC +++      +     +
Sbjct: 68  GAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLMPDGTS 127
Query: 141 QVVHPADLCFKLPDNVSLEEGAMCEPLSVGL----------------------HACRRAN 178
           +               +  E  +   +SV                         A   A 
Sbjct: 128 RFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGISTGYGAAVNTAK 187
Query: 179 IGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQ 238
           + P +   + G G +GL  ++G +  GA RI+ VD++  + + AKE GA   +    N Q
Sbjct: 188 LEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATECI----NPQ 243
Query: 239 DIAEEVEKIQKAMGT-GIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTP 297
           D ++ ++++   M   G+D SF+C G  K M  AL A   G            +      
Sbjct: 244 DFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKG----WGVSVVVGVAASGEE 299
Query: 298 AAVREVDVVGVFRYKNT----W------PLCLELLRSGKIDVKPLVTHRFGFSQKEVEEA 347
            A R   +V    +K T    W      P  +    S KI V   VTH   F   E+ +A
Sbjct: 300 IATRPFQLVTGRTWKGTAFGGWKSVESVPKLVSEYMSKKIKVDEFVTHNLSFD--EINKA 357
Query: 348 FETSARG 354
           FE    G
Sbjct: 358 FELMHSG 364

>pdb|1MC5|A Chain A, Ternary Complex Of Human Glutathione-Dependent Formaldehyde Dehydrogenase With S-(Hydroxymethyl)glutathione And Nadh Length = 374

Iteration: 1
 Score = 90.9 bits (224), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 93/367 (25%), Positives = 145/367 (39%), Gaps = 47/367 (12%)
Query: 21  AWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHE 80
           AW  G   L I+  E+     ++V +++ A  +C +D +   TL  AD     P+++GHE
Sbjct: 13  AWEAG-KPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAY---TLSGADPEGCFPVILGHE 68
Query: 81  CAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLAN 140
            AG++E VG  V  L  GD V       C  C  C   + NLC +++      +     +
Sbjct: 69  GAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLMPDGTS 128
Query: 141 QVVHPADLCFKLPDNVSLEEGAMCEPLSVG------------LHAC----------RRAN 178
           +               +  E  +   +SV             L  C            A 
Sbjct: 129 RFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGISTGYGAAVNTAK 188
Query: 179 IGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQ 238
           + P +   + G G +GL  ++G +  GA RI+ VD++  + + AKE GA   +    N Q
Sbjct: 189 LEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATECI----NPQ 244
Query: 239 DIAEEVEKIQKAMGT-GIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTP 297
           D ++ ++++   M   G+D SF+C G  K M  AL A   G            +      
Sbjct: 245 DFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKG----WGVSVVVGVAASGEE 300
Query: 298 AAVREVDVVGVFRYKNT----W------PLCLELLRSGKIDVKPLVTHRFGFSQKEVEEA 347
            A R   +V    +K T    W      P  +    S KI V   VTH   F   E+ +A
Sbjct: 301 IATRPFQLVTGRTWKGTAFGGWKSVESVPKLVSEYMSKKIKVDEFVTHNLSFD--EINKA 358
Query: 348 FETSARG 354
           FE    G
Sbjct: 359 FELMHSG 365

>pdb|3IP1|A Chain A, Structure Of Putative Alcohol Dehydrogenase (Tm_042) From Thermotoga Maritima Length = 404

Iteration: 1
 Score = 90.9 bits (224), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 86/311 (27%), Positives = 140/311 (45%), Gaps = 31/311 (9%)
Query: 41  PYDVLVRMKAVGICGSDVHYLKTLRCADFVVKE----PMVIGHECAGVIEKVGSEV---- 92
           P ++++++KA GICGSDVH  +T      +       P+ +GHE +GV+ + G E     
Sbjct: 55  PTEIIIKVKACGICGSDVHXAQTDEEGYILYPGLTGFPVTLGHEFSGVVVEAGPEAINRR 114
Query: 93  --KTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCF 150
             K    G+ V  E  + C  C  C  G  N C  +       V G+ A  V   A   +
Sbjct: 115 TNKRFEIGEPVCAEEXLWCGHCRPCAEGFPNHCENLNELGFN-VDGAFAEYVKVDAKYAW 173
Query: 151 KLPDNVSLEEG-------AMCEPLSVGLHAC--RRANIGPETNVLIMGAGPIGLVTMLGA 201
            L +   + EG       ++ EP SV  +A   R   I P  NV+I+G GPIGL  +   
Sbjct: 174 SLRELEGVYEGDRLFLAGSLVEPTSVAYNAVIVRGGGIRPGDNVVILGGGPIGLAAVAIL 233
Query: 202 RAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDC 261
           +  GA ++++ +  + R ++AKELGAD+++  +   ++  E V  +    G G  +  + 
Sbjct: 234 KHAGASKVILSEPSEVRRNLAKELGADHVIDPTK--ENFVEAV--LDYTNGLGAKLFLEA 289
Query: 262 AGFNKTMSTALSAT--RAGGKVCLVGM-GHHEMTVPLTPAA--VREVDVVGVFRYK--NT 314
            G  + +   +     RA G    V +    +  +PLT     VR   +VG   +    T
Sbjct: 290 TGVPQLVWPQIEEVIWRARGINATVAIVARADAKIPLTGEVFQVRRAQIVGSQGHSGHGT 349
Query: 315 WPLCLELLRSG 325
           +P  + L  SG
Sbjct: 350 FPRVISLXASG 360

>pdb|1P0C|A Chain A, Crystal Structure Of The Nadp(H)-Dependent Vertebrate Alcohol Dehydrogenase (Adh8) Length = 373

Iteration: 1
 Score = 88.6 bits (218), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 92/367 (25%), Positives = 156/367 (42%), Gaps = 44/367 (11%)
Query: 24  LGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAG 83
           L + T+ + P +      ++V +++ A GICGSD   LK +  + F    P+++GHE  G
Sbjct: 22  LSLETITVAPPK-----AHEVRIKILASGICGSDSSVLKEIIPSKF----PVILGHEAVG 72
Query: 84  VIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVV 143
           V+E +G+ V  + PGD+V       C  C  CK    N C +    A   +   + ++  
Sbjct: 73  VVESIGAGVTCVKPGDKVIPLFVPQCGSCRACKSSNSNFCEKNDMGAKTGLMADMTSRFT 132
Query: 144 HPADLCFKLPDNVSLEEGAMCEPLSVG-------LHAC--------------RRANIGPE 182
                 + L    +  E  +   ++V        L +C                A + P 
Sbjct: 133 CRGKPIYNLMGTSTFTEYTVVADIAVAKIDPKAPLESCLIGCGFATGYGAAVNTAKVTPG 192
Query: 183 TNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAE 242
           +   + G G +G   ++G +A GA RI+ V     +   A ELGA   +    N +D  +
Sbjct: 193 STCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIELGATECL----NPKDYDK 248
Query: 243 EV-EKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLV-GMG---HHEMTVPLTP 297
            + E I +    G+D + +CAG  +TM  AL +T  G  V +V G+          PL  
Sbjct: 249 PIYEVICEKTNGGVDYAVECAGRIETMMNALQSTYCGSGVTVVLGLASPNERLPLDPLLL 308
Query: 298 AAVREV--DVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGG 355
              R +   V G F+ +    L  + ++  KI+V  LV+ +    Q  + +AFE  + G 
Sbjct: 309 LTGRSLKGSVFGGFKGEEVSRLVDDYMKK-KINVNFLVSTKLTLDQ--INKAFELLSSGQ 365
Query: 356 TAIKVMF 362
               +M 
Sbjct: 366 GVRSIMI 372

>pdb|2FZW|A Chain A, Structure Of The Binary Complex Of The E67l Mutant Of Human Glutathione-Dependent Formaldehyde Dehydrogenase With Nad(H) Length = 373

Iteration: 1
 Score = 87.8 bits (216), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 92/367 (25%), Positives = 144/367 (39%), Gaps = 47/367 (12%)
Query: 21  AWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHE 80
           AW  G   L I+  E+     ++V +++ A  +C +D +   TL  AD     P+++GH 
Sbjct: 12  AWEAG-KPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAY---TLSGADPEGCFPVILGHL 67
Query: 81  CAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLAN 140
            AG++E VG  V  L  GD V       C  C  C   + NLC +++      +     +
Sbjct: 68  GAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLMPDGTS 127
Query: 141 QVVHPADLCFKLPDNVSLEEGAMCEPLSVG------------LHAC----------RRAN 178
           +               +  E  +   +SV             L  C            A 
Sbjct: 128 RFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGISTGYGAAVNTAK 187
Query: 179 IGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQ 238
           + P +   + G G +GL  ++G +  GA RI+ VD++  + + AKE GA   +    N Q
Sbjct: 188 LEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATECI----NPQ 243
Query: 239 DIAEEVEKIQKAMGT-GIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTP 297
           D ++ ++++   M   G+D SF+C G  K M  AL A   G            +      
Sbjct: 244 DFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKG----WGVSVVVGVAASGEE 299
Query: 298 AAVREVDVVGVFRYKNT----W------PLCLELLRSGKIDVKPLVTHRFGFSQKEVEEA 347
            A R   +V    +K T    W      P  +    S KI V   VTH   F   E+ +A
Sbjct: 300 IATRPFQLVTGRTWKGTAFGGWKSVESVPKLVSEYMSKKIKVDEFVTHNLSFD--EINKA 357
Query: 348 FETSARG 354
           FE    G
Sbjct: 358 FELMHSG 364

>pdb|4DL9|A Chain A, Crystal Structure Of S-nitrosoglutathione Reductase From Tomato (solanum Lycopersicum) In Complex With Nad+ Length = 396

Iteration: 1
 Score = 87.8 bits (216), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 87/355 (24%), Positives = 146/355 (41%), Gaps = 46/355 (12%)
Query: 43  DVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVA 102
           +V V++    +C +D +   T    D     P V+GHE AG++E VG  V  + PGD V 
Sbjct: 53  EVRVKVLYTALCHTDAY---TWSGKDPEGLFPCVLGHEAAGIVESVGEGVTEVQPGDHVI 109
Query: 103 LEPGISCWRCDHCKGGRYNLCPEMK----------------FFATPPVHGSLANQVVHPA 146
                 C  C  CK G+ NLC +++                     P++  +        
Sbjct: 110 PCYQAECRECKFCKSGKTNLCGKVRAATGVGVMMNDRKSRFSINGKPIYHFMGTSTFSQ- 168
Query: 147 DLCFKLPDNVSLEEGAMCEPL-SVGLHAC----------RRANIGPETNVLIMGAGPIGL 195
              + +  +VS+ +     PL  V L  C            A + P + V + G G +GL
Sbjct: 169 ---YTVVHDVSVAKIDPVAPLEKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGL 225
Query: 196 VTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGI 255
               GA+A GA RI+ +D+D  +   AK  G    +    + Q I + +  +      G+
Sbjct: 226 AVAEGAKAAGASRIIGIDIDSKKFDRAKNFGVTEFINPKEHEQPIQQVIVDLTDG---GV 282
Query: 256 DVSFDCAGFNKTMSTALSATRAG-GKVCLVGM---GHHEMTVP--LTPAAVREVDVVGVF 309
           D SF+C G    M +AL     G G   +VG+   G    T P  L    V +    G F
Sbjct: 283 DYSFECIGNVSVMRSALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGF 342
Query: 310 RYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL 364
           + ++  P  ++     +I V   +TH    +  ++ +AF+     G  ++V+ ++
Sbjct: 343 KSRSQVPSLVDKYLKKEIKVDEYITHNMTLA--DINKAFDL-MHDGDCLRVVLDM 394

>pdb|1CDO|A Chain A, Alcohol Dehydrogenase (E.C.1.1.1.1) (Ee Isozyme) Complexed With Nicotinamide Adenine Dinucleotide (Nad), And Zinc Length = 374

Iteration: 1
 Score = 87.4 bits (215), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 83/336 (24%), Positives = 148/336 (44%), Gaps = 33/336 (9%)
Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
           L I+  E+      ++ +++ A G+C +D+++L   +  D     P+V+GHE AG++E V
Sbjct: 21  LVIEEIEVDVPHANEIRIKIIATGVCHTDLYHLFEGKHKDGF---PVVLGHEGAGIVESV 77
Query: 89  GSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPV----------HGSL 138
           G  V    PG++V       C  C  C+  + N C +     +P V           G  
Sbjct: 78  GPGVTEFQPGEKVIPLFISQCGECRFCQSPKTNQCVKGWANESPDVMSPKETRFTCKGRK 137
Query: 139 ANQVVHPADLC-FKLPDNVSLEEGAMCEPL-SVGLHAC----------RRANIGPETNVL 186
             Q +  +    + + + +++ +     PL +V L  C            A + P +   
Sbjct: 138 VLQFLGTSTFSQYTVVNQIAVAKIDPSAPLDTVCLLGCGVSTGFGAAVNTAKVEPGSTCA 197
Query: 187 IMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEK 246
           + G G +GL  ++G  + GA RI+ VD++  +   AK  GA + V  + + + I++ + K
Sbjct: 198 VFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVFGATDFVNPNDHSEPISQVLSK 257
Query: 247 IQKAMGTGIDVSFDCAGFNKTMSTAL-SATRAGGKVCLVGMG--HHEMTVPLTPAAVR-- 301
           +      G+D S +C G    M  AL S  +  G   LVG    H   T P+   A R  
Sbjct: 258 MTNG---GVDFSLECVGNVGVMRNALESCLKGWGVSVLVGWTDLHDVATRPIQLIAGRTW 314
Query: 302 EVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRF 337
           +  + G F+ K+  P  ++     K+ +   +THR 
Sbjct: 315 KGSMFGGFKGKDGVPKMVKAYLDKKVKLDEFITHRM 350

>pdb|1AGN|A Chain A, X-Ray Structure Of Human Sigma Alcohol Dehydrogenase Length = 373

Iteration: 1
 Score = 86.7 bits (213), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 79/348 (22%), Positives = 147/348 (42%), Gaps = 36/348 (10%)
Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
             I+  E+      +V +++ A GIC +D H +K       V K P+++GHE  G++E +
Sbjct: 21  FSIEEIEVAPPKTKEVRIKILATGICRTDDHVIK----GTMVSKFPVIVGHEATGIVESI 76
Query: 89  GSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKF-----FATPPVHGSLANQVV 143
           G  V T+ PGD+V       C  C+ C+    NLC           A      +   + V
Sbjct: 77  GEGVTTVKPGDKVIPLFLPQCRECNACRNPDGNLCIRSDITGRGVLADGTTRFTCKGKPV 136
Query: 144 HPADLCFKLPDNVSLEEGAMCE------PLSVGLHAC----------RRANIGPETNVLI 187
           H         +   ++E ++ +      P  V L  C          +   + P +  ++
Sbjct: 137 HHFMNTSTFTEYTVVDESSVAKIDDAAPPEKVCLIGCGFSTGYGAAVKTGKVKPGSTCVV 196
Query: 188 MGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKI 247
            G G +GL  ++G ++ GA RI+ +D++  +   A  +GA   +    + + I+E + ++
Sbjct: 197 FGLGGVGLSVIMGCKSAGASRIIGIDLNKDKFEKAMAVGATECISPKDSTKPISEVLSEM 256
Query: 248 QKAMGTGIDVSFDCAGFNKTMSTALSATRAG-GKVCLVGMGHHEMTVPLTPAAVREVD-- 304
               G  +  +F+  G  +TM  AL++     G   +VG+      +   P  +      
Sbjct: 257 T---GNNVGYTFEVIGHLETMIDALASCHMNYGTSVVVGVPPSAKMLTYDPMLLFTGRTW 313
Query: 305 ---VVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFE 349
              V G  + ++  P  +    + K D+  L+TH   F  K++ E FE
Sbjct: 314 KGCVFGGLKSRDDVPKLVTEFLAKKFDLDQLITHVLPF--KKISEGFE 359

>pdb|1D1T|A Chain A, Mutant Of Human Sigma Alcohol Dehydrogenase With Leucine At Position 141 Length = 373

Iteration: 1
 Score = 86.3 bits (212), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 79/348 (22%), Positives = 147/348 (42%), Gaps = 36/348 (10%)
Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
             I+  E+      +V +++ A GIC +D H +K       V K P+++GHE  G++E +
Sbjct: 21  FSIEEIEVAPPKTKEVRIKILATGICRTDDHVIK----GTMVSKFPVIVGHEATGIVESI 76
Query: 89  GSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKF-----FATPPVHGSLANQVV 143
           G  V T+ PGD+V       C  C+ C+    NLC           A      +   + V
Sbjct: 77  GEGVTTVKPGDKVIPLFLPQCRECNACRNPDGNLCIRSDITGRGVLADGTTRFTCKGKPV 136
Query: 144 HPADLCFKLPDNVSLEEGAMCE------PLSVGLHAC----------RRANIGPETNVLI 187
           H         +   ++E ++ +      P  V L  C          +   + P +  ++
Sbjct: 137 HHFLNTSTFTEYTVVDESSVAKIDDAAPPEKVCLIGCGFSTGYGAAVKTGKVKPGSTCVV 196
Query: 188 MGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKI 247
            G G +GL  ++G ++ GA RI+ +D++  +   A  +GA   +    + + I+E + ++
Sbjct: 197 FGLGGVGLSVIMGCKSAGASRIIGIDLNKDKFEKAMAVGATECISPKDSTKPISEVLSEM 256
Query: 248 QKAMGTGIDVSFDCAGFNKTMSTALSATRAG-GKVCLVGMGHHEMTVPLTPAAVREVD-- 304
               G  +  +F+  G  +TM  AL++     G   +VG+      +   P  +      
Sbjct: 257 T---GNNVGYTFEVIGHLETMIDALASCHMNYGTSVVVGVPPSAKMLTYDPMLLFTGRTW 313
Query: 305 ---VVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFE 349
              V G  + ++  P  +    + K D+  L+TH   F  K++ E FE
Sbjct: 314 KGCVFGGLKSRDDVPKLVTEFLAKKFDLDQLITHVLPF--KKISEGFE 359

>pdb|2DPH|A Chain A, Crystal Structure Of Formaldehyde Dismutase Length = 398

Iteration: 1
 Score = 79.7 bits (195), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 80/307 (26%), Positives = 136/307 (44%), Gaps = 47/307 (15%)
Query: 18  NMAAWLLGVNTLKIQPFELPSLG------PYDVLVRMKAVGICGSDVHYLKTLRCADFVV 71
           N +    G   L+++    P L        + V++++ +  ICGSD H  +      F+V
Sbjct: 3   NKSVVYHGTRDLRVETVPYPKLEHNNRKLEHAVILKVVSTNICGSDQHIYR----GRFIV 58
Query: 72  KEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLC------PE 125
            +  V+GHE  G + + GS+V+ +  GD V++   ++C RC +CK  R ++C      P+
Sbjct: 59  PKGHVLGHEITGEVVEKGSDVELMDIGDLVSVPFNVACGRCRNCKEARSDVCENNLVNPD 118
Query: 126 MKF----FATPPVHGSLANQVVHP-AD-LCFKLPDNVSLEEGA-----MCEPLSVGLHAC 174
                  F      G  A  V+ P AD +  K  D     E       + + L  G H C
Sbjct: 119 ADLGAFGFDLKGWSGGQAEYVLVPYADYMLLKFGDKEQAMEKIKDLTLISDILPTGFHGC 178
Query: 175 RRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVS 234
             A + P ++V I GAGP+G     GAR  GA  +++ D +  RL +  + G + I    
Sbjct: 179 VSAGVKPGSHVYIAGAGPVGRCAAAGARLLGAACVIVGDQNPERLKLLSDAGFETI---- 234
Query: 235 TNLQDIAEEVEKIQKAMGT-GIDVSFDCAGF--------------NKTMSTALSATRAGG 279
            +L++ A   ++I + +G   +D   D  GF              N  +++     RAGG
Sbjct: 235 -DLRNSAPLRDQIDQILGKPEVDCGVDAVGFEAHGLGDEANTETPNGALNSLFDVVRAGG 293
Query: 280 KVCLVGM 286
            + + G+
Sbjct: 294 AIGIPGI 300

>pdb|1YQD|A Chain A, Sinapyl Alcohol Dehydrogenase Complexed With Nadp+ Length = 366

Iteration: 1
 Score = 77.4 bits (189), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 81/305 (26%), Positives = 134/305 (43%), Gaps = 26/305 (8%)
Query: 2   GKGGMSQGEKEDGEEVNMAAWLLGVNTLKIQPFELP--SLGPYDVLVRMKAVGICGSDVH 59
           G  GMS+  +E+   V    W     +  + PF     + G  DV  ++   G+C SD+H
Sbjct: 1   GSHGMSKSPEEE-HPVKAFGWAARDQSGHLSPFNFSRRATGEEDVRFKVLYCGVCHSDLH 59
Query: 60  YLKTLRCADF-VVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGI-SCWRCDHCKG 117
            +K     D+     P+V GHE  G + +VGS+VK +  GD+V +   + +C  C+ C  
Sbjct: 60  SIKN----DWGFSMYPLVPGHEIVGEVTEVGSKVKKVNVGDKVGVGCLVGACHSCESCAN 115
Query: 118 GRYNLCPEMKFFATPPVH------GSLANQVVHPADLCFKLPDNVSLEEGA--MCEPLSV 169
              N CP+M        H      G  +N +V       + PDN+ L+ GA  +C  ++V
Sbjct: 116 DLENYCPKMILTYASIYHDGTITYGGYSNHMVANERYIIRFPDNMPLDGGAPLLCAGITV 175
Query: 170 GLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADN 229
                      P  ++ I+G G +G V +  A+AFG+   VI      +    K  GAD+
Sbjct: 176 YSPLKYFGLDEPGKHIGIVGLGGLGHVAVKFAKAFGSKVTVISTSPSKKEEALKNFGADS 235
Query: 230 IVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHH 289
            +        ++ + E++Q A GT +D   D       +       ++ GK+ LVG    
Sbjct: 236 FL--------VSRDQEQMQAAAGT-LDGIIDTVSAVHPLLPLFGLLKSHGKLILVGAPEK 286
Query: 290 EMTVP 294
            + +P
Sbjct: 287 PLELP 291

>pdb|1KOL|A Chain A, Crystal Structure Of Formaldehyde Dehydrogenase Length = 398

Iteration: 1
 Score = 71.2 bits (173), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 80/311 (25%), Positives = 132/311 (42%), Gaps = 54/311 (17%)
Query: 18  NMAAWLLGVNTLKIQPFELPSLG-------PYDVLVRMKAVGICGSDVHYLKTLRCADFV 70
           N     LG   +++Q  + P +         + V++++ +  ICGSD H ++    A   
Sbjct: 3   NRGVVYLGSGKVEVQKIDYPKMQDPRGKKIEHGVILKVVSTNICGSDQHMVRGRTTAQV- 61
Query: 71  VKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMK--- 127
               +V+GHE  G + + G +V+ L  GD V++   ++C RC  CK     +C  +    
Sbjct: 62  ---GLVLGHEITGEVIEKGRDVENLQIGDLVSVPFNVACGRCRSCKEMHTGVCLTVNPAR 118
Query: 128 ------FFATPPVHGSLANQVVHP-ADL-CFKLPDNVSLEEG-----AMCEPLSVGLHAC 174
                 +       G  A  V+ P AD    KLPD     E       + + L  G H  
Sbjct: 119 AGGAYGYVDMGDWTGGQAEYVLVPYADFNLLKLPDRDKAMEKIRDLTCLSDILPTGYHGA 178
Query: 175 RRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELG---ADNIV 231
             A +GP + V + GAGP+GL     AR  GA  +++ D++  RL+ AK  G   AD  +
Sbjct: 179 VTAGVGPGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLNPARLAHAKAQGFEIAD--L 236
Query: 232 KVSTNLQDIAEEVEKIQKAMGT-GIDVSFDCAGFN---------------KTMSTALSAT 275
            + T L       E+I   +G   +D + D  GF                  +++ +  T
Sbjct: 237 SLDTPLH------EQIAALLGEPEVDCAVDAVGFEARGHGHEGAKHEAPATVLNSLMQVT 290
Query: 276 RAGGKVCLVGM 286
           R  GK+ + G+
Sbjct: 291 RVAGKIGIPGL 301

>pdb|2H6E|A Chain A, Crystal Structure Of The D-Arabinose Dehydrogenase From Sulfolobus Solfataricus Length = 344

Iteration: 1
 Score = 68.9 bits (167), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 75/312 (24%), Positives = 132/312 (42%), Gaps = 18/312 (5%)
Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
           L I+   +P     +VL+R+   G+C +D+   K +  A    + P+++GHE AG I +V
Sbjct: 16  LSIEDVNIPEPQGEEVLIRIGGAGVCRTDLRVWKGVE-AKQGFRLPIILGHENAGTIVEV 74
Query: 89  GSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADL 148
           G E+  +  GD V +        C +C+ G++N+C            G     +V  +  
Sbjct: 75  G-ELAKVKKGDNVVVYATWGDLTCRYCREGKFNICKNQIIPGQTTNGGFSEYMLVKSSRW 133
Query: 149 CFKLPDNVSLEEGAMCEPLSVGLHACRRA----NIGPETNVLIMGAGPIGLVTMLGARAF 204
             KL     +E   + +  +  + A R+A    +   E  V++ G G + + T+   +A 
Sbjct: 134 LVKLNSLSPVEAAPLADAGTTSMGAIRQALPFISKFAEPVVIVNGIGGLAVYTIQILKAL 193
Query: 205 GAPRIVIVDVDDYR--LSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCA 262
               I IV +   +     A ELGAD +    + ++D    + K+   +G  I  + D  
Sbjct: 194 -MKNITIVGISRSKKHRDFALELGADYV----SEMKDAESLINKLTDGLGASI--AIDLV 246
Query: 263 GFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGV-FRYKNTWPLCLEL 321
           G  +T           G + LVGM    +++     AV    ++G  +   N     + L
Sbjct: 247 GTEETTYNLGKLLAQEGAIILVGMEGKRVSLEAFDTAVWNKKLLGSNYGSLNDLEDVVRL 306
Query: 322 LRSGKIDVKPLV 333
             SGKI  KP +
Sbjct: 307 SESGKI--KPYI 316

>pdb|1WLY|A Chain A, Crystal Structure Of 2-haloacrylate Reductase Length = 333

Iteration: 1
 Score = 65.9 bits (159), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 68/253 (26%), Positives = 113/253 (44%), Gaps = 38/253 (15%)
Query: 38  SLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVP 97
           S GP  V +R  A+G+   D ++   +     V + P+V+G E A V+E+VG  V     
Sbjct: 25  SPGPGQVRLRNTAIGVNFLDTYHRAGIPHPLVVGEPPIVVGFEAAAVVEEVGPGVTDFTV 84
Query: 98  GDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVS 157
           G+RV      +C                      PP+ G+ + + ++PA+   K+P ++ 
Sbjct: 85  GERVC-----TC---------------------LPPL-GAYSQERLYPAEKLIKVPKDLD 117
Query: 158 LEE----GAMCEPLSVGLHACRRANIGPETNVLI-MGAGPIGLVTMLGARAFGAPRIVIV 212
           L++    G M + ++      +   + P   VLI   AG +G + +  AR  GA  I  V
Sbjct: 118 LDDVHLAGLMLKGMTAQYLLHQTHKVKPGDYVLIHAAAGGMGHIMVPWARHLGATVIGTV 177
Query: 213 DVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTAL 272
             ++ +   A++LG  + +  ST  QD AE V +I    G G+DV +D  G   T+  +L
Sbjct: 178 STEE-KAETARKLGCHHTINYST--QDFAEVVREITG--GKGVDVVYDSIG-KDTLQKSL 231
Query: 273 SATRAGGKVCLVG 285
              R  G     G
Sbjct: 232 DCLRPRGMCAAYG 244

>pdb|3UOG|A Chain A, Crystal Structure Of Putative Alcohol Dehydrogenase From Sinorhizobium Meliloti 1021 Length = 363

Iteration: 1
 Score = 64.7 bits (156), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 84/335 (25%), Positives = 142/335 (42%), Gaps = 26/335 (7%)
Query: 27  NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIE 86
           + LK+    +P  G +D++VR  AV +   D   L+T    D     P V   + +GV+E
Sbjct: 39  HDLKLAERPVPEAGEHDIIVRTLAVSLNYRDKLVLETGXGLDLAF--PFVPASDXSGVVE 96
Query: 87  KVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVH-GSLANQVVHP 145
            VG  V    PGDRV     IS +      G R        +      H G L+  VV P
Sbjct: 97  AVGKSVTRFRPGDRV-----ISTFAPGWLDGLRPGTGRTPAYETLGGAHPGVLSEYVVLP 151
Query: 146 ADLCFKLPDNVSLEEGAM--CEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARA 203
                  P ++   E +   C  L+       + ++     V++ G G + L  +  A+A
Sbjct: 152 EGWFVAAPKSLDAAEASTLPCAGLTAWFALVEKGHLRAGDRVVVQGTGGVALFGLQIAKA 211
Query: 204 FGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGT-GIDVSFDCA 262
            GA  +++      +L  A  LGAD+ +     L++  + VE++    G  G D   + A
Sbjct: 212 TGA-EVIVTSSSREKLDRAFALGADHGIN---RLEE--DWVERVYALTGDRGADHILEIA 265
Query: 263 GFNKTMSTALSATRAGGKVCLVG-MGHHEMTVPLTPAAVREVDVVGVFRYKNTWPLCLEL 321
           G    +  +L A    G++ ++G +   E++ P+ P  ++   V G+          LE 
Sbjct: 266 G-GAGLGQSLKAVAPDGRISVIGVLEGFEVSGPVGPLLLKSPVVQGISVGHRR---ALED 321
Query: 322 LRSG--KIDVKPLVTHRFGFSQKEVEEAFETSARG 354
           L     ++ +KP++  R+ F+  EV EA     RG
Sbjct: 322 LVGAVDRLGLKPVIDXRYKFT--EVPEALAHLDRG 354

>pdb|3TWO|A Chain A, The Crystal Structure Of Cad From Helicobacter Pylori Complexed With Nadp(H) Length = 348

Iteration: 1
 Score = 63.9 bits (154), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 64/243 (26%), Positives = 107/243 (44%), Gaps = 25/243 (10%)
Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKE---PMVIGHECAGVI 85
            K   F   ++GP DVL+ +   GIC SD+H       A    KE   PM+ GHE AG+I
Sbjct: 17  FKPHDFSRHAVGPRDVLIDILYAGICHSDIH------SAYSEWKEGIYPMIPGHEIAGII 70
Query: 86  EKVGSEVKTLVPGDRVALEPGI-SCWRCDHCKGGRYNLCPEM--------KFFATPPVHG 136
           ++VG  VK    GD V +   + SC  C  CK  +   C ++         F    P  G
Sbjct: 71  KEVGKGVKKFKIGDVVGVGCFVNSCKACKPCKEHQEQFCTKVVFTYDCLDSFHDNEPHMG 130
Query: 137 SLANQVVHPADLCFKLPDNVSLEEGA--MCEPLSVGLHACRRANIGPETNVLIMGAGPIG 194
             +N +V   +    +  N  LE+ A  +C  ++      + + +   T V + G G +G
Sbjct: 131 GYSNNIVVDENYVISVDKNAPLEKVAPLLCAGITT-YSPLKFSKVTKGTKVGVAGFGGLG 189
Query: 195 LVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTG 254
            + +  A A GA  + +   ++++   A  +G  +     T+ +   EE++ I   + T 
Sbjct: 190 SMAVKYAVAMGA-EVSVFARNEHKKQDALSMGVKHFY---TDPKQCKEELDFIISTIPTH 245
Query: 255 IDV 257
            D+
Sbjct: 246 YDL 248

>pdb|3JYL|A Chain A, Crystal Structures Of Pseudomonas Syringae Pv. Tomato Dc3000 Quinone Oxidoreductase Length = 325

Iteration: 1
 Score = 61.2 bits (147), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 78/264 (29%), Positives = 113/264 (42%), Gaps = 39/264 (14%)
Query: 25  GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGV 84
           G   L+   FE  + GP  V+VR KA+G+   D +Y   L  A F+   P  +G E AGV
Sbjct: 12  GPEVLEYVDFEPEAPGPQAVVVRNKAIGLNFIDTYYRSGLYPAPFL---PSGLGAEGAGV 68
Query: 85  IEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVH 144
           +E VG EV     GDRVA                          + T P+ G+ +   V 
Sbjct: 69  VEAVGDEVTRFKVGDRVA--------------------------YGTGPL-GAYSEVHVL 101
Query: 145 PADLCFKLPDNVSLEEGA--MCEPLSVGLHACRRANIGPETNVLI-MGAGPIGLVTMLGA 201
           P     KL D+VS E+ A  M + L+V     +   + P   +L    AG +G +    A
Sbjct: 102 PEANLVKLADSVSFEQAAALMLKGLTVQYLLRQTYQVKPGEIILFHAAAGGVGSLACQWA 161
Query: 202 RAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDC 261
           +A GA  I  V   + + + AK LGA   +  S   +D+A+ V ++    G    V +D 
Sbjct: 162 KALGAKLIGTVSSPE-KAAHAKALGAWETIDYSH--EDVAKRVLELTD--GKKCPVVYDG 216
Query: 262 AGFNKTMSTALSATRAGGKVCLVG 285
            G   T  T+L +    G V   G
Sbjct: 217 VG-QDTWLTSLDSVAPRGLVVSFG 239

>pdb|2HCY|A Chain A, Yeast Alcohol Dehydrogenase I, Saccharomyces Cerevisiae Fermentative Enzyme Length = 347

Iteration: 1
 Score = 60.8 bits (146), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 71/265 (26%), Positives = 116/265 (43%), Gaps = 19/265 (7%)
Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFV--VKEPMVIGHECAGVIE 86
           L+ +   +P     ++L+ +K  G+C +D+H        D+   VK P+V GHE AGV+ 
Sbjct: 18  LEYKDIPVPKPKANELLINVKYSGVCHTDLHAWH----GDWPLPVKLPLVGGHEGAGVVV 73
Query: 87  KVGSEVKTLVPGDRVALEP-GISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHP 145
            +G  VK    GD   ++    SC  C++C+ G  + CP           GS        
Sbjct: 74  GMGENVKGWKIGDYAGIKWLNGSCMACEYCELGNESNCPHADLSGYTH-DGSFQQYATAD 132
Query: 146 ADLCFKLPDNVSLEEGA--MCEPLSVGLHACRRANIGPETNVLIMG-AGPIGLVTMLGAR 202
           A     +P    L + A  +C  ++V   A + AN+     V I G AG +G + +  A+
Sbjct: 133 AVQAAHIPQGTDLAQVAPILCAGITV-YKALKSANLMAGHWVAISGAAGGLGSLAVQYAK 191
Query: 203 AFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTG-IDVSFDC 261
           A G  R++ +D  + +  + + +G +  +   T  +DI   V K       G I+VS   
Sbjct: 192 AMGY-RVLGIDGGEGKEELFRSIGGEVFIDF-TKEKDIVGAVLKATDGGAHGVINVSVSE 249
Query: 262 AGFNKTMSTALSATRAGGKVCLVGM 286
           A     +  +    RA G   LVGM
Sbjct: 250 A----AIEASTRYVRANGTTVLVGM 270

>pdb|3QWA|A Chain A, Crystal Structure Of Saccharomyces Cerevisiae Zeta-Crystallin-Like Quinone Oxidoreductase Zta1 Length = 334

Iteration: 1
 Score = 58.5 bits (140), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 77/330 (23%), Positives = 135/330 (40%), Gaps = 60/330 (18%)
Query: 25  GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKT-LRCADFVVKEPMVIGHECAG 83
           G + +K + + +PS+   ++L++ K  G     V+Y+++  R   +  ++P V+G E +G
Sbjct: 19  GYDVIKYEDYPVPSISEEELLIKNKYTG-----VNYIESYFRKGIYPCEKPYVLGREASG 73
Query: 84  VIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVV 143
            +   G  V     GD+VA           +    +Y+     K  +  PV         
Sbjct: 74  TVVAKGKGVTNFEVGDQVAY--------ISNSTFAQYS-----KISSQGPV--------- 111
Query: 144 HPADLCFKLPDNVSLEE-----GAMCEPLSVGLHACRRANIGPETNVLIMGA-GPIGLVT 197
                  KLP   S EE       + + L+         ++     VL+  A G +GL+ 
Sbjct: 112 ------MKLPKGTSDEELKLYAAGLLQVLTALSFTNEAYHVKKGDYVLLFAAAGGVGLIL 165
Query: 198 MLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDV 257
               +  GA  I +   D+ +L +AKE GA+ ++  S   +DI  +V K     G G+D 
Sbjct: 166 NQLLKMKGAHTIAVASTDE-KLKIAKEYGAEYLINASK--EDILRQVLKFTN--GKGVDA 220
Query: 258 SFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVP------LTPAAVREV--DVVGVF 309
           SFD  G   T   +L+A +  G    V  G+    +P      L+P  +  V   + G  
Sbjct: 221 SFDSVG-KDTFEISLAALKRKG--VFVSFGNASGLIPPFSITRLSPKNITLVRPQLYGYI 277
Query: 310 RYKNTWPLCLE----LLRSGKIDVKPLVTH 335
                W    +    L+ S K+++K   T+
Sbjct: 278 ADPEEWKYYSDEFFGLVNSKKLNIKIYKTY 307

>pdb|1PS0|A Chain A, Crystal Structure Of The Nadp(H)-Dependent Cinnamyl Alcohol Dehydrogenase From Saccharomyces Cerevisiae Length = 360

Iteration: 1
 Score = 57.0 bits (136), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 74/279 (26%), Positives = 119/279 (42%), Gaps = 31/279 (11%)
Query: 42  YDVLVRMKAVGICGSDVHYLKTLRCAD---FVVKEPMVIGHECAGVIEKVGSEVKT-LVP 97
           +D+ ++++A G+CGSD+H      CA      +K P+V+GHE  G + K+G +  + L  
Sbjct: 34  HDIDIKIEACGVCGSDIH------CAAGHWGNMKMPLVVGHEIVGKVVKLGPKSNSGLKV 87
Query: 98  GDRVALEPGI-SCWRCDHCKGGRYNLCPEMKFFATPPV------HGSLANQVVHPADLCF 150
           G RV +   + SC  CD CK      C +     + P        G  AN V        
Sbjct: 88  GQRVGVGAQVFSCLECDRCKNDNEPYCTKFVTTYSQPYEDGYVSQGGYANYVRVHEHFVV 147
Query: 151 KLPDNVSLEEGA--MCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPR 208
            +P+N+     A  +C  L+V      R   GP   V I+G G IG +  L ++A GA  
Sbjct: 148 PIPENIPSHLAAPLLCGGLTV-YSPLVRNGCGPGKKVGIVGLGGIGSMGTLISKAMGAET 206
Query: 209 IVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTM 268
            VI      R    K +GAD+ +          EE +  +K   T  D+   CA     +
Sbjct: 207 YVISRSSRKREDAMK-MGADHYIAT-------LEEGDWGEKYFDT-FDLIVVCASSLTDI 257
Query: 269 STAL--SATRAGGKVCLVGMGHHEMTVPLTPAAVREVDV 305
              +   A + GG++  + +      + L P  ++ V +
Sbjct: 258 DFNIMPKAMKVGGRIVSISIPEQHEMLSLKPYGLKAVSI 296

>pdb|1UUF|A Chain A, Crystal Structure Of A Zinc-Type Alcohol Dehydrogenase-Like Protein Yahk Length = 369

Iteration: 1
 Score = 56.6 bits (135), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 63/226 (27%), Positives = 98/226 (43%), Gaps = 19/226 (8%)
Query: 40  GPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGD 99
           GP DV + +   G+C SD+H +++          P V GHE  G +  VG +V+   PGD
Sbjct: 46  GPNDVKIEIAYCGVCHSDLHQVRSEWAGTVY---PCVPGHEIVGRVVAVGDQVEKYAPGD 102
Query: 100 RVALEPGI-SCWRCDHCKGGRYNLCPEMK-FFATP----PVH--GSLANQVVHPADLCFK 151
            V +   + SC  C+ C+ G  N C  M   + +P    P H  G  + Q+V       +
Sbjct: 103 LVGVGCIVDSCKHCEECEDGLENYCDHMTGTYNSPTPDEPGHTLGGYSQQIVVHERYVLR 162
Query: 152 LPDNVSLEEGAMCEPLSVG----LHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAP 207
           +      E+ A   PL           R    GP   V ++G G +G + +  A A GA 
Sbjct: 163 I--RHPQEQLAAVAPLLCAGITTYSPLRHWQAGPGKKVGVVGIGGLGHMGIKLAHAMGA- 219
Query: 208 RIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGT 253
            +V     + +   AK LGAD +V  S N  ++A  ++     + T
Sbjct: 220 HVVAFTTSEAKREAAKALGADEVVN-SRNADEMAAHLKSFDFILNT 264

>pdb|3GOH|A Chain A, Crystal Structure Of Alcohol Dehydrogenase Superfamily Protein (np_718042.1) From Shewanella Oneidensis At 1.55 A Resolution Length = 315

Iteration: 1
 Score = 53.1 bits (126), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 49/180 (27%), Positives = 75/180 (41%), Gaps = 29/180 (16%)
Query: 15  EEVNMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEP 74
           E+  + A+    +++ +   ++P+L   D+LV+ +A+GI   D  ++K            
Sbjct: 3   EQHQVWAYQTKTHSVTLNSVDIPALAADDILVQNQAIGINPVDWKFIK---ANPINWSNG 59
Query: 75  MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPV 134
            V G + AGVI KVG++V +   G RVA           H    R               
Sbjct: 60  HVPGVDGAGVIVKVGAKVDSKXLGRRVAY----------HTSLKR--------------- 94
Query: 135 HGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHACRRANIGPETNVLIMGAGPI 193
           HGS A   V   D    LPDN+S E  A    PL     A  +  +  +  VLI+G G +
Sbjct: 95  HGSFAEFTVLNTDRVXTLPDNLSFERAAALPCPLLTAWQAFEKIPLTKQREVLIVGFGAV 154

>pdb|3FBG|A Chain A, Crystal Structure Of A Putative Arginate Lyase From Staphylococcus Haemolyticus Length = 346

Iteration: 1
 Score = 53.1 bits (126), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 54/213 (25%), Positives = 91/213 (42%), Gaps = 44/213 (20%)
Query: 27  NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIE 86
           N  K    ++P    +++LV+++++ +   D       R  D V K P V+G +  GV+E
Sbjct: 18  NLFKTFNLDIPEPKVHEILVKIQSISVNPVDTKQ----RLMD-VSKAPRVLGFDAIGVVE 72
Query: 87  KVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPA 146
            VG+EV     GD V                          +  +P  +GS A   +   
Sbjct: 73  SVGNEVTMFNQGDIVY-------------------------YSGSPDQNGSNAEYQLINE 107
Query: 147 DLCFKLPDNVSLEEGAMCEPLS-----------VGLHACRRANIGPETNVLIMGAGPIGL 195
            L  K P N+S E+ A+  PL+            G+   R  N G +T ++I GAG +G 
Sbjct: 108 RLVAKAPKNISAEQ-AVSLPLTGITAYETLFDVFGISRNRNENEG-KTLLIINGAGGVGS 165
Query: 196 VTMLGARAFGAPRIVIVDVDDYRLSVAKELGAD 228
           +    A+A+G  R++     +  +   K++GAD
Sbjct: 166 IATQIAKAYGL-RVITTASRNETIEWTKKMGAD 197

>pdb|3KRT|A Chain A, Crystal Structure Of Putative Crotonyl Coa Reductase From Streptomyces Coelicolor A3(2) Length = 456

Iteration: 1
 Score = 50.8 bits (120), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 84/342 (24%), Positives = 136/342 (39%), Gaps = 52/342 (15%)
Query: 28  TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHY-----LKTL-------RCADFVVKEPM 75
           ++ +    +P LGP + LV + A  +  + VH      L T        R +D   +  +
Sbjct: 57  SIHLDDVPVPELGPGEALVAVMASSVNYNSVHTSIFEPLSTFGFLERYGRVSDLAKRHDL 116
Query: 76  ---VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYN---LCPEMKFF 129
              VIG + AGV+ + G  V     GD V       C   +      +N   L PE + +
Sbjct: 117 PYHVIGSDLAGVVLRTGPGVNAWQAGDEVVAH----CLSVELESSDGHNDTMLDPEQRIW 172
Query: 130 ATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRR------ANIGPET 183
                 G LA   +  ++     PD++S EE A   P  V   A R+      A +    
Sbjct: 173 GFETNFGGLAEIALVKSNQLMPKPDHLSWEEAAA--PGLVNSTAYRQLVSRNGAGMKQGD 230
Query: 184 NVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVST------- 235
           NVLI GA G +G      A A GA  I +V     +  + + +GA+ I+  +        
Sbjct: 231 NVLIWGASGGLGSYATQFALAGGANPICVVSSPQ-KAEICRAMGAEAIIDRNAEGYRFWK 289
Query: 236 --NLQDIAEEVEKIQKAM-----GTGIDVSFDCAGFNKTMSTALSATRAGGKV--CLVGM 286
             N QD  +E ++  K +     G  ID+ F+  G  +T   ++  TR GG +  C    
Sbjct: 290 DENTQD-PKEWKRFGKRIRELTGGEDIDIVFEHPG-RETFGASVFVTRKGGTITTCASTS 347
Query: 287 GH-HEMTVPLTPAAVREVDVVGVFRYKNTWPLCLELLRSGKI 327
           G+ HE        +++ +       Y+  W     L+  G+I
Sbjct: 348 GYMHEYDNRYLWMSLKRIIGSHFANYREAWE-ANRLIAKGRI 388

>pdb|2B5W|A Chain A, Crystal Structure Of D38c Glucose Dehydrogenase Mutant From Haloferax Mediterranei Length = 357

Iteration: 1
 Score = 48.9 bits (115), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 58/261 (22%), Positives = 112/261 (42%), Gaps = 30/261 (11%)
Query: 43  DVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVI----EKVGSEVKTLVPG 98
           + LVR   VG+CG+D   +          ++ +V+GHE  GV+    +    E   +VP 
Sbjct: 27  EALVRTLRVGVCGTDHEVIAGGHGGFPEGEDHLVLGHEAVGVVVDPNDTELEEGDIVVPT 86
Query: 99  DRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPV--HGSLANQVVHPADLCFKLPDNV 156
            R     G +    ++ +  + ++ P+  +F    V  HG ++     P     ++P + 
Sbjct: 87  VRRPPASGTN----EYFERDQPDMAPDGMYFERGIVGAHGYMSEFFTSPEKYLVRIPRSQ 142
Query: 157 SLEEGAMCEPLSVG------LHACRRANIGPETNVLIMGAGPIGLVT--MLGARAFGAPR 208
           + E G + EP+S+        +A R A     ++  ++G G +GL+T  ML     G   
Sbjct: 143 A-ELGFLIEPISITEKALEHAYASRSAFDWDPSSAFVLGNGSLGLLTLAMLKVDDKGYEN 201
Query: 209 IVIV---DVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFN 265
           +  +   D  D  + + +EL A  +    T ++D+ +  E+        +D  ++  GF 
Sbjct: 202 LYCLGRRDRPDPTIDIIEELDATYVDSRQTPVEDVPDVYEQ--------MDFIYEATGFP 253
Query: 266 KTMSTALSATRAGGKVCLVGM 286
           K    ++ A    G   L+G+
Sbjct: 254 KHAIQSVQALAPNGVGALLGV 274

>pdb|4A27|A Chain A, Crystal Structure Of Human Synaptic Vesicle Membrane Protein Vat-1 Homolog-Like Protein Length = 349

Iteration: 1
 Score = 48.9 bits (115), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 54/240 (22%), Positives = 96/240 (40%), Gaps = 41/240 (17%)
Query: 25  GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGV 84
           G+N L++    +P     ++ +R+KA G+   D+   +     D   K P+V G EC+G+
Sbjct: 14  GLNKLRLFRKAMPEPQDGELKIRVKACGLNFIDLMVRQG--NIDNPPKTPLVPGFECSGI 71
Query: 85  IEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVH 144
           +E +G  VK    GDRV      + W                            A  V  
Sbjct: 72  VEALGDSVKGYEIGDRVMAFVNYNAW----------------------------AEVVCT 103
Query: 145 PADLCFKLPDNVSLEEGAM--CEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGAR 202
           P +  +K+PD++S  E A      ++  +     AN+    +VL+  AG  G+   +   
Sbjct: 104 PVEFVYKIPDDMSFSEAAAFPMNFVTAYVMLFEVANLREGMSVLVHSAGG-GVGQAVAQL 162
Query: 203 AFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDI-AEEVEKIQKAMGTGIDVSFDC 261
               P + +          A     + I    T+L D  A+ V+++++    G+D+  DC
Sbjct: 163 CSTVPNVTV-------FGTASTFKHEAIKDSVTHLFDRNADYVQEVKRISAEGVDIVLDC 215

>pdb|1YB5|A Chain A, Crystal Structure Of Human Zeta-crystallin With Bound Nadp Length = 351

Iteration: 1
 Score = 48.5 bits (114), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 67/281 (23%), Positives = 115/281 (40%), Gaps = 49/281 (17%)
Query: 42  YDVLVRMKAVGICGSDVHYLKTLRCADFVVKE--PMVIGHECAGVIEKVGSEVKTLVPGD 99
           + VL+++ A G+   + +    +R   +  K   P   G + AGVIE VG        GD
Sbjct: 58  HQVLIKVHACGVNPVETY----IRSGTYSRKPLLPYTPGSDVAGVIEAVGDNASAFKKGD 113
Query: 100 RVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLE 159
           RV                           F +  + G  A   +      +KLP+ +  +
Sbjct: 114 RV---------------------------FTSSTISGGYAEYALAADHTVYKLPEKLDFK 146
Query: 160 EGAMCE-PLSVGLHA-CRRANIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDD 216
           +GA    P      A    A +    +VL+ GA G +GL     ARA+G   +     ++
Sbjct: 147 QGAAIGIPYFTAYRALIHSACVKAGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEE 206
Query: 217 YRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMG-TGIDVSFDCAGFNKTMSTALSAT 275
            +  V +  GA  +     N +++   ++KI+K +G  GID+  +    N  +S  LS  
Sbjct: 207 GQKIVLQN-GAHEVF----NHREV-NYIDKIKKYVGEKGIDIIIEMLA-NVNLSKDLSLL 259
Query: 276 RAGGKVCLVGMGHHEMTVPLTP--AAVREVDVVGVFRYKNT 314
             GG+V +VG      T+ + P     +E  ++GV  + +T
Sbjct: 260 SHGGRVIVVG---SRGTIEINPRDTMAKESSIIGVTLFSST 297

>pdb|2B5V|A Chain A, Crystal Structure Of Glucose Dehydrogenase From Haloferax Mediterranei Length = 357

Iteration: 1
 Score = 44.7 bits (104), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 57/259 (22%), Positives = 110/259 (42%), Gaps = 26/259 (10%)
Query: 43  DVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRV- 101
           + LVR   VG+ G+D   +          ++ +V+GHE  GV+  V      L  GD V 
Sbjct: 27  EALVRTLRVGVDGTDHEVIAGGHGGFPEGEDHLVLGHEAVGVV--VDPNDTELEEGDIVV 84
Query: 102 -ALEPGISCWRCDHCKGGRYNLCPEMKFFATPPV--HGSLANQVVHPADLCFKLPDNVSL 158
             +    +    ++ +  + ++ P+  +F    V  HG ++     P     ++P + + 
Sbjct: 85  PTVRRPPASGTNEYFERDQPDMAPDGMYFERGIVGAHGYMSEFFTSPEKYLVRIPRSQA- 143
Query: 159 EEGAMCEPLSVG------LHACRRANIGPETNVLIMGAGPIGLVT--MLGARAFGAPRIV 210
           E G + EP+S+        +A R A     ++  ++G G +GL+T  ML     G   + 
Sbjct: 144 ELGFLIEPISITEKALEHAYASRSAFDWDPSSAFVLGNGSLGLLTLAMLKVDDKGYENLY 203
Query: 211 IV---DVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKT 267
            +   D  D  + + +EL A  +    T ++D+ +  E+        +D  ++  GF K 
Sbjct: 204 CLGRRDRPDPTIDIIEELDATYVDSRQTPVEDVPDVYEQ--------MDFIYEATGFPKH 255
Query: 268 MSTALSATRAGGKVCLVGM 286
              ++ A    G   L+G+
Sbjct: 256 AIQSVQALAPNGVGALLGV 274

>pdb|2CD9|A Chain A, Sulfolobus Solfataricus Glucose Dehydrogenase 1 - Apo Form Length = 366

Iteration: 1
 Score = 42.0 bits (97), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 64/264 (24%), Positives = 103/264 (39%), Gaps = 45/264 (17%)
Query: 25  GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHY------LKTL-RCADFVVKEPMVI 77
           GV    +   +L S G   + +R    GICG+D         L TL +  DF     +V+
Sbjct: 12  GVQVKDVDEKKLDSYGK--IKIRTIYNGICGTDREIVNGKLTLSTLPKGKDF-----LVL 64
Query: 78  GHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVH-- 135
           GHE  GV+E+          GD V       C  C +C  GR + C E   F    +H  
Sbjct: 65  GHEAIGVVEE---SYHGFSQGDLVMPVNRRGCGICRNCLVGRPDFC-ETGEFGEAGIHKM 120
Query: 136 -GSLANQVVHPADLCFKLPDNVSLEEGAMCEPLS---------------VGLHACRRANI 179
            G +            K+P ++  + G + +PL+               V +  C    +
Sbjct: 121 DGFMREWWYDDPKYLVKIPKSIE-DIGILAQPLADIEKSIEEILEVQKRVPVWTCDDGTL 179
Query: 180 GPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQD 239
                VL++G GPIG++  L  R +G      ++V         E+    I +  TN  +
Sbjct: 180 NCR-KVLVVGTGPIGVLFTLLFRTYG------LEVWMANRREPTEVEQTVIEETKTNYYN 232
Query: 240 IAEEVEKIQKAMGTGIDVSFDCAG 263
            +   +K++ ++G   DV  D  G
Sbjct: 233 SSNGYDKLKDSVGK-FDVIIDATG 255

>pdb|1QOR|A Chain A, Crystal Structure Of Escherichia Coli Quinone Oxidoreductase Complexed With Nadph Length = 327

Iteration: 1
 Score = 42.0 bits (97), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 58/224 (25%), Positives = 88/224 (39%), Gaps = 38/224 (16%)
Query: 43  DVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVA 102
           ++ V  KA+GI   D +    L     +   P  +G E AG++ KVGS VK +  GDRV 
Sbjct: 30  EIQVENKAIGINFIDTYIRSGLYPPPSL---PSGLGTEAAGIVSKVGSGVKHIKAGDRV- 85
Query: 103 LEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGA 162
                              +  +    A   VH  +       AD    LP  +S E+ A
Sbjct: 86  -------------------VYAQSALGAYSSVHNII-------ADKAAILPAAISFEQAA 119
Query: 163 --MCEPLSVGLHACRRANIGPETNVLI-MGAGPIGLVTMLGARAFGAPRIVIVDVDDYRL 219
               + L+V     +   I P+   L    AG +GL+    A+A GA  I  V       
Sbjct: 120 ASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQ 179
Query: 220 SVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAG 263
           S  K  GA  ++      +D+ E +++I    G  + V +D  G
Sbjct: 180 SALKA-GAWQVINYRE--EDLVERLKEITG--GKKVRVVYDSVG 218

>pdb|2CDB|A Chain A, Sulfolobus Solfataricus Glucose Dehydrogenase 1 In Complex With Nadp And Glucose Length = 366

Iteration: 1
 Score = 41.6 bits (96), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 64/264 (24%), Positives = 103/264 (39%), Gaps = 45/264 (17%)
Query: 25  GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHY------LKTL-RCADFVVKEPMVI 77
           GV    +   +L S G   + +R    GICG+D         L TL +  DF     +V+
Sbjct: 12  GVQVKDVDEKKLDSYGK--IKIRTIYNGICGADREIVNGKLTLSTLPKGKDF-----LVL 64
Query: 78  GHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVH-- 135
           GHE  GV+E+          GD V       C  C +C  GR + C E   F    +H  
Sbjct: 65  GHEAIGVVEE---SYHGFSQGDLVMPVNRRGCGICRNCLVGRPDFC-ETGEFGEAGIHKM 120
Query: 136 -GSLANQVVHPADLCFKLPDNVSLEEGAMCEPLS---------------VGLHACRRANI 179
            G +            K+P ++  + G + +PL+               V +  C    +
Sbjct: 121 DGFMREWWYDDPKYLVKIPKSIE-DIGILAQPLADIEKSIEEILEVQKRVPVWTCDDGTL 179
Query: 180 GPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQD 239
                VL++G GPIG++  L  R +G      ++V         E+    I +  TN  +
Sbjct: 180 NCR-KVLVVGTGPIGVLFTLLFRTYG------LEVWMANRREPTEVEQTVIEETKTNYYN 232
Query: 240 IAEEVEKIQKAMGTGIDVSFDCAG 263
            +   +K++ ++G   DV  D  G
Sbjct: 233 SSNGYDKLKDSVGK-FDVIIDATG 255

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	364
1pl8_A	356	Human sorbitol dehydrogenase; NAD, oxidoreductase;	1e-177
1e3j_A	352	NADP(H)-dependent ketose reductase; oxidoreductase	1e-173
3m6i_A	363	L-arabinitol 4-dehydrogenase; medium chain dehydro	1e-166
2dq4_A	343	L-threonine 3-dehydrogenase; NAD-dependent, oxidor	1e-159
4ej6_A	370	Putative zinc-binding dehydrogenase; structural ge	1e-157
4a2c_A	346	Galactitol-1-phosphate 5-dehydrogenase; oxidoreduc	1e-152
2d8a_A	348	PH0655, probable L-threonine 3-dehydrogenase; pyro	1e-149
2b5w_A	357	Glucose dehydrogenase; nucleotide binding motif, o	1e-131
3ip1_A	404	Alcohol dehydrogenase, zinc-containing; structural	1e-124
2cdc_A	366	Glucose dehydrogenase glucose 1-dehydrogenase, DHG	4e-99
1vj0_A	380	Alcohol dehydrogenase, zinc-containing; TM0436, st	6e-88
3fpc_A	352	NADP-dependent alcohol dehydrogenase; oxydoreducta	1e-75
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	2e-73
3jv7_A	345	ADH-A; dehydrogenase, nucleotide binding, rossmann	6e-70
1h2b_A	359	Alcohol dehydrogenase; oxidoreductase, archaea, hy	1e-66
2h6e_A	344	ADH-4, D-arabinose 1-dehydrogenase; rossman fold,	3e-60
1f8f_A	371	Benzyl alcohol dehydrogenase; rossmann fold, oxido	5e-58
1e3i_A	376	Alcohol dehydrogenase, class II; HET: NAD; 2.08A {	2e-52
2dph_A	398	Formaldehyde dismutase; dismutation of aldehydes,	6e-52
2fzw_A	373	Alcohol dehydrogenase class III CHI chain; S-nitro	9e-52
1p0f_A	373	NADP-dependent alcohol dehydrogenase; ADH topology	2e-51
1kol_A	398	Formaldehyde dehydrogenase; oxidoreductase; HET: N	4e-51
2jhf_A	374	Alcohol dehydrogenase E chain; oxidoreductase, met	9e-51
3s2e_A	340	Zinc-containing alcohol dehydrogenase superfamily;	7e-49
1cdo_A	374	Alcohol dehydrogenase; oxidoreductase, oxidoreduct	2e-48
1rjw_A	339	ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD	2e-47
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	2e-45
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	5e-45
3uog_A	363	Alcohol dehydrogenase; structural genomics, protei	5e-44
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	3e-43
3krt_A	456	Crotonyl COA reductase; structural genomics, prote	6e-43
1zsy_A	357	Mitochondrial 2-enoyl thioester reductase; medium-	7e-37
1gu7_A	364	Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s	1e-35
1piw_A	360	Hypothetical zinc-type alcohol dehydrogenase- like	6e-34
1yqd_A	366	Sinapyl alcohol dehydrogenase; lignin, monolignol,	9e-32
3tqh_A	321	Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella	2e-31
2cf5_A	357	Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign	3e-31
3two_A	348	Mannitol dehydrogenase; cinnamyl-alcohol dehydroge	4e-31
1uuf_A	369	YAHK, zinc-type alcohol dehydrogenase-like protein	6e-30
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	6e-30
4eye_A	342	Probable oxidoreductase; structural genomics, niai	1e-29
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	4e-29
3gqv_A	371	Enoyl reductase; medium-chain reductase (MDR super	1e-28
3goh_A	315	Alcohol dehydrogenase, zinc-containing; NP_718042.	7e-28
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	2e-27
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	3e-27
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	3e-27
3gms_A	340	Putative NADPH:quinone reductase; structural genom	4e-27
4a27_A	349	Synaptic vesicle membrane protein VAT-1 homolog-L;	1e-26
3iup_A	379	Putative NADPH:quinone oxidoreductase; YP_296108.1	8e-26
3gaz_A	343	Alcohol dehydrogenase superfamily protein; oxidore	3e-25
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	5e-25
2vn8_A	375	Reticulon-4-interacting protein 1; mitochondrion,	2e-24
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	2e-24
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	5e-23
4dvj_A	363	Putative zinc-dependent alcohol dehydrogenase Pro;	6e-23
3fbg_A	346	Putative arginate lyase; structural genomics, unkn	3e-21
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	5e-20
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	1e-17
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	2e-17
1tt7_A	330	YHFP; alcohol dehydrogenase, Zn-dependent, NAD, st	1e-07
1xa0_A	328	Putative NADPH dependent oxidoreductases; structur	3e-07
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	7e-07
3nx4_A	324	Putative oxidoreductase; csgid, structural genomic	4e-05
3fpf_A	298	Mtnas, putative uncharacterized protein; thermonic	6e-04

>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A Length = 356

 Score =  495 bits (1277), Expect = e-177
 Identities = 167/346 (48%), Positives = 232/346 (67%), Gaps = 5/346 (1%)

Query: 18  NMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVI 77
           N++  + G   L+++ + +P  GP +VL+RM +VGICGSDVHY +  R  +F+VK+PMV+
Sbjct: 8   NLSLVVHGPGDLRLENYPIPEPGPNEVLLRMHSVGICGSDVHYWEYGRIGNFIVKKPMVL 67

Query: 78  GHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGS 137
           GHE +G +EKVGS VK L PGDRVA+EPG      + CK GRYNL P + F ATPP  G+
Sbjct: 68  GHEASGTVEKVGSSVKHLKPGDRVAIEPGAPRENDEFCKMGRYNLSPSIFFCATPPDDGN 127

Query: 138 LANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVT 197
           L     H A  C+KLPDNV+ EEGA+ EPLSVG+HACRR  +     VL+ GAGPIG+VT
Sbjct: 128 LCRFYKHNAAFCYKLPDNVTFEEGALIEPLSVGIHACRRGGVTLGHKVLVCGAGPIGMVT 187

Query: 198 MLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDV 257
           +L A+A GA ++V+ D+   RLS AKE+GAD ++++S   +   E   K++  +G   +V
Sbjct: 188 LLVAKAMGAAQVVVTDLSATRLSKAKEIGADLVLQISK--ESPQEIARKVEGQLGCKPEV 245

Query: 258 SFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKNTWPL 317
           + +C G   ++   + ATR+GG + LVG+G    TVPL  AA+REVD+ GVFRY NTWP+
Sbjct: 246 TIECTGAEASIQAGIYATRSGGTLVLVGLGSEMTTVPLLHAAIREVDIKGVFRYCNTWPV 305

Query: 318 CLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFN 363
            + +L S  ++VKPLVTHRF    ++  EAFET  + G  +K+M  
Sbjct: 306 AISMLASKSVNVKPLVTHRFPL--EKALEAFET-FKKGLGLKIMLK 348

>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1 Length = 352

 Score =  485 bits (1250), Expect = e-173
 Identities = 171/347 (49%), Positives = 232/347 (66%), Gaps = 4/347 (1%)

Query: 18  NMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVI 77
           N++A L   N L+++   +P     +VL++M  VGICGSDVHY +  R ADF+VK+PMVI
Sbjct: 5   NLSAVLYKQNDLRLEQRPIPEPKEDEVLLQMAYVGICGSDVHYYEHGRIADFIVKDPMVI 64

Query: 78  GHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGS 137
           GHE +G + KVG  VK L  GDRVA+EPG+ C RC  CK G+YNLCP++ F ATPP  G+
Sbjct: 65  GHEASGTVVKVGKNVKHLKKGDRVAVEPGVPCRRCQFCKEGKYNLCPDLTFCATPPDDGN 124

Query: 138 LANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVT 197
           LA   VH AD C KLPDNVSLEEGA+ EPLSVG+HACRRA +   T VL++GAGPIGLV+
Sbjct: 125 LARYYVHAADFCHKLPDNVSLEEGALLEPLSVGVHACRRAGVQLGTTVLVIGAGPIGLVS 184

Query: 198 MLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDV 257
           +L A+A+GA  +V       RL VAK  GAD  + V    ++ +  +E+I+ A+G   +V
Sbjct: 185 VLAAKAYGA-FVVCTARSPRRLEVAKNCGADVTLVVDPAKEEESSIIERIRSAIGDLPNV 243

Query: 258 SFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKNTWPL 317
           + DC+G  K ++  ++ TR GG + LVGMG   +TVPL  A  RE+D+  VFRY N +P+
Sbjct: 244 TIDCSGNEKCITIGINITRTGGTLMLVGMGSQMVTVPLVNACAREIDIKSVFRYCNDYPI 303

Query: 318 CLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARG-GTAIKVMFN 363
            LE++ SG+ +VK LVTH F    ++  +AFE + +     IKVM +
Sbjct: 304 ALEMVASGRCNVKQLVTHSFKL--EQTVDAFEAARKKADNTIKVMIS 348

>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa} Length = 363

 Score =  468 bits (1206), Expect = e-166
 Identities = 137/358 (38%), Positives = 202/358 (56%), Gaps = 16/358 (4%)

Query: 15  EEVNMAAWLLGVNTLKIQPFEL--------PSLGPYDVLVRMKAVGICGSDVHYLKTLRC 66
            + N+  +    + L I               L   +V V +++ GICGSDVH+ K    
Sbjct: 6   SKTNIGVFTNPQHDLWISEASPSLESVQKGEELKEGEVTVAVRSTGICGSDVHFWKHGCI 65

Query: 67  ADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEM 126
              +V+   V+GHE AG +  V   VK++  GDRVA+EP + C  C+ C  GRYN C  +
Sbjct: 66  GPMIVECDHVLGHESAGEVIAVHPSVKSIKVGDRVAIEPQVICNACEPCLTGRYNGCERV 125

Query: 127 KFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVL 186
            F +TPPV G L   V HPA  C K+ + +S E GAM EPLSV L   +RA +     VL
Sbjct: 126 DFLSTPPVPGLLRRYVNHPAVWCHKIGN-MSYENGAMLEPLSVALAGLQRAGVRLGDPVL 184

Query: 187 IMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNL--QDIAEEV 244
           I GAGPIGL+TML A+A GA  +VI D+D+ RL  AKE+  + +      L  ++ A+++
Sbjct: 185 ICGAGPIGLITMLCAKAAGACPLVITDIDEGRLKFAKEICPEVVTHKVERLSAEESAKKI 244

Query: 245 EKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAVREVD 304
            +     G    V+ +C G   +++ A+ A + GGKV ++G+G +E+ +P   A+VREVD
Sbjct: 245 VES--FGGIEPAVALECTGVESSIAAAIWAVKFGGKVFVIGVGKNEIQIPFMRASVREVD 302

Query: 305 VVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARG-GTAIKVM 361
           +   +RY NTWP  + L+ +G +D+  LVTHRF    ++  +AFET++     AIKV 
Sbjct: 303 LQFQYRYCNTWPRAIRLVENGLVDLTRLVTHRFPL--EDALKAFETASDPKTGAIKVQ 358

>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A* Length = 343

 Score =  448 bits (1156), Expect = e-159
 Identities = 107/347 (30%), Positives = 169/347 (48%), Gaps = 13/347 (3%)

Query: 20  AAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGH 79
            A L     L +    +P  GP ++LVR++A  ICG+D+H  K    A   ++ P+V GH
Sbjct: 4   LAKLAPEEGLTLVDRPVPEPGPGEILVRVEAASICGTDLHIWKWDAWARGRIRPPLVTGH 63

Query: 80  ECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLA 139
           E +GV+E VG  V+    GD V+LE  I C  C  C+ G Y++C   +        G  A
Sbjct: 64  EFSGVVEAVGPGVRRPQVGDHVSLESHIVCHACPACRTGNYHVCLNTQILGVDR-DGGFA 122

Query: 140 NQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTML 199
             VV PA+  +  P ++  E  A+ EP    +H     +     +VLI GAGPIGL+  +
Sbjct: 123 EYVVVPAENAWVNPKDLPFEVAAILEPFGNAVHTVYAGSGVSGKSVLITGAGPIGLMAAM 182

Query: 200 GARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF 259
             RA GA  I++ D + YRL+ A+      +  +  +L      +E +++  G+G++V  
Sbjct: 183 VVRASGAGPILVSDPNPYRLAFARPYADRLVNPLEEDL------LEVVRRVTGSGVEVLL 236

Query: 260 DCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAV-REVDVVGVF--RYKNTWP 316
           + +G    +   L A   GG+  ++G+    +   L    V R +   G+   R   TW 
Sbjct: 237 EFSGNEAAIHQGLMALIPGGEARILGIPSDPIRFDLAGELVMRGITAFGIAGRRLWQTWM 296

Query: 317 LCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFN 363
               L+ SG++D+ PL+THR   S     EAF      G A+KV+ +
Sbjct: 297 QGTALVYSGRVDLSPLLTHRLPLS--RYREAFGL-LASGQAVKVILD 340

>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A* Length = 370

 Score =  446 bits (1149), Expect = e-157
 Identities = 105/361 (29%), Positives = 174/361 (48%), Gaps = 13/361 (3%)

Query: 5   GMSQGEKEDGEEVNM-AAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKT 63
           G+  G +    +  M A  L  V  + ++   +P  GP D+LV+++A GICG+D H L  
Sbjct: 10  GVDLGTENLYFQSMMKAVRLESVGNISVRNVGIPEPGPDDLLVKVEACGICGTDRHLLH- 68

Query: 64  LRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLC 123
               +F    P+ +GHE  G++ + GS V+ + PG R+  +P ISC RC  C+ GR NLC
Sbjct: 69  ---GEFPSTPPVTLGHEFCGIVVEAGSAVRDIAPGARITGDPNISCGRCPQCQAGRVNLC 125

Query: 124 PEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPET 183
             ++        G  A  V+ P    F++P  +    GA CEPL+  LH    + I   +
Sbjct: 126 RNLRAIGIHR-DGGFAEYVLVPRKQAFEIPLTLDPVHGAFCEPLACCLHGVDLSGIKAGS 184

Query: 184 NVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEE 243
            V I+G G IGL+T+  AR  GA  +++      +  +A+E+GA   V  S    D+ E 
Sbjct: 185 TVAILGGGVIGLLTVQLARLAGATTVILSTRQATKRRLAEEVGATATVDPSA--GDVVEA 242

Query: 244 VEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAV--R 301
           +      +  G+DV  +CAG  +T+  +    +AGG V ++G+      V + P  +  R
Sbjct: 243 IAGPVGLVPGGVDVVIECAGVAETVKQSTRLAKAGGTVVILGVLPQGEKVEIEPFDILFR 302

Query: 302 EVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVM 361
           E+ V+G F          +L+ +G I++  +++ R      E  +           +KV+
Sbjct: 303 ELRVLGSFINPFVHRRAADLVATGAIEIDRMISRRISLD--EAPDVISN-PAAAGEVKVL 359

Query: 362 F 362
            
Sbjct: 360 V 360

>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli} Length = 346

 Score =  432 bits (1113), Expect = e-152
 Identities = 94/353 (26%), Positives = 156/353 (44%), Gaps = 21/353 (5%)

Query: 20  AAWLLGVNTLKIQPFELPSL-GPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIG 78
           +        +++    +P +    +V V++ + G+CGSD+  +       +    P+ +G
Sbjct: 3   SVVNDTDGIVRVAESVIPEIKHQDEVRVKIASSGLCGSDLPRIFKNGAHYY----PITLG 58

Query: 79  HECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSL 138
           HE +G I+ VGS V  L PGD VA  P + C+ C  C  G Y+ C +  F  +    G  
Sbjct: 59  HEFSGYIDAVGSGVDDLHPGDAVACVPLLPCFTCPECLKGFYSQCAKYDFIGSRR-DGGF 117

Query: 139 ANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTM 198
           A  +V      F LP ++ +E+GA  EP++VGLHA   A      NV+I+GAG IGL+ +
Sbjct: 118 AEYIVVKRKNVFALPTDMPIEDGAFIEPITVGLHAFHLAQGCENKNVIIIGAGTIGLLAI 177

Query: 199 LGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVS 258
             A A GA  +  +D+   +L++AK  GA      S       +    +         + 
Sbjct: 178 QCAVALGAKSVTAIDISSEKLALAKSFGAMQTFNSSE--MSAPQMQSVL--RELRFNQLI 233

Query: 259 FDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTP---AAVREVDVVGVFRY---- 311
            + AG  +T+  A+       ++ LVG  H ++ +          +E+ V+G +      
Sbjct: 234 LETAGVPQTVELAVEIAGPHAQLALVGTLHQDLHLTSATFGKILRKELTVIGSWMNYSSP 293

Query: 312 --KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMF 362
                W     LL   K+ ++PL+ HR  F      +A    AR     KV+ 
Sbjct: 294 WPGQEWETASRLLTERKLSLEPLIAHRGSFE--SFAQAVRDIARNAMPGKVLL 344

>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A* Length = 348

 Score =  424 bits (1092), Expect = e-149
 Identities = 105/339 (30%), Positives = 180/339 (53%), Gaps = 11/339 (3%)

Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
            ++   ++P  GP +VL+++ A  ICG+D+H  +    A   +K P ++GHE AG + ++
Sbjct: 17  AELVEVDVPKPGPGEVLIKVLATSICGTDLHIYEWNEWAQSRIKPPQIMGHEVAGEVVEI 76

Query: 89  GSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADL 148
           G  V+ +  GD V++E  I C +C  C+ G+Y++C   K F      G  A   V PA  
Sbjct: 77  GPGVEGIEVGDYVSVETHIVCGKCYACRRGQYHVCQNTKIFGV-DTDGVFAEYAVVPAQN 135

Query: 149 CFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPR 208
            +K P ++  E   + EPL   +       I  ++ VLI GAGP+GL+ +  A+A GA  
Sbjct: 136 IWKNPKSIPPEYATLQEPLGNAVDTVLAGPISGKS-VLITGAGPLGLLGIAVAKASGAYP 194

Query: 209 IVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTM 268
           +++ +  D+R  +AK++GAD ++      +D+ +EV  I    G G+DV  + +G  K +
Sbjct: 195 VIVSEPSDFRRELAKKVGADYVINPFE--EDVVKEVMDI--TDGNGVDVFLEFSGAPKAL 250

Query: 269 STALSATRAGGKVCLVGMGHHEMTVPLTPAAV-REVDVVGVF--RYKNTWPLCLELLRSG 325
              L A    G+V L+G+   ++T+      + + + + G+       TW     LL+SG
Sbjct: 251 EQGLQAVTPAGRVSLLGLYPGKVTIDFNNLIIFKALTIYGITGRHLWETWYTVSRLLQSG 310

Query: 326 KIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL 364
           K+++ P++TH++     + EEAFE   R G   KV+F L
Sbjct: 311 KLNLDPIITHKY-KGFDKYEEAFEL-MRAGKTGKVVFML 347

>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A* Length = 357

 Score =  377 bits (970), Expect = e-131
 Identities = 73/364 (20%), Positives = 134/364 (36%), Gaps = 38/364 (10%)

Query: 20  AAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGH 79
            A   G +   +     P     + LVR   VG+CG+D   +          ++ +V+GH
Sbjct: 4   IAVKRGEDRPVVIEKPRPEPESGEALVRTLRVGVCGTDHEVIAGGHGGFPEGEDHLVLGH 63

Query: 80  ECAGVIEKVGSEVKTLVPGDRVALEPG--ISCWRCDHCKGGRYNLCPEMKFFATPPV--H 135
           E  GV+  V      L  GD V        +    ++ +  + ++ P+  +F    V  H
Sbjct: 64  EAVGVV--VDPNDTELEEGDIVVPTVRRPPASGTNEYFERDQPDMAPDGMYFERGIVGAH 121

Query: 136 GSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANI------GPETNVLIMG 189
           G ++     P     ++P + + E G + EP+S+   A   A           ++  ++G
Sbjct: 122 GYMSEFFTSPEKYLVRIPRSQA-ELGFLIEPISITEKALEHAYASRSAFDWDPSSAFVLG 180

Query: 190 AGPIGLVTMLGARAF--GAPRIVIV---DVDDYRLSVAKELGADNIVKVSTNLQDIAEEV 244
            G +GL+T+   +    G   +  +   D  D  + + +EL A  +    T ++D+ +  
Sbjct: 181 NGSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDIIEELDATYVDSRQTPVEDVPDVY 240

Query: 245 EKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAA----- 299
           E         +D  ++  GF K    ++ A    G   L+G+           A      
Sbjct: 241 E--------QMDFIYEATGFPKHAIQSVQALAPNGVGALLGVPSDWAFEVDAGAFHREMV 292

Query: 300 VREVDVVGVFRYKN--TWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTA 357
           +    +VG             +   +  K  ++ LVT     S  E E AF+      T 
Sbjct: 293 LHNKALVGSVNSHVEHFEAATVTFTKLPKWFLEDLVTGVHPLS--EFEAAFD---DDDTT 347

Query: 358 IKVM 361
           IK  
Sbjct: 348 IKTA 351

>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima} Length = 404

 Score =  363 bits (933), Expect = e-124
 Identities = 90/388 (23%), Positives = 166/388 (42%), Gaps = 36/388 (9%)

Query: 3   KGGMSQGEKE-DGEEVNMAAWLLGVNTLKIQPFELPSL-GPYDVLVRMKAVGICGSDVHY 60
           +     G K+ +G+   + + +     ++++    P +  P ++++++KA GICGSDVH 
Sbjct: 15  RPEFKLGPKDIEGKLTWLGSKVWRYPEVRVEEVPEPRIEKPTEIIIKVKACGICGSDVHM 74

Query: 61  LKTLRCADFVV----KEPMVIGHECAGVIEKVGSEV------KTLVPGDRVALEPGISCW 110
            +T      +       P+ +GHE +GV+ + G E       K    G+ V  E  + C 
Sbjct: 75  AQTDEEGYILYPGLTGFPVTLGHEFSGVVVEAGPEAINRRTNKRFEIGEPVCAEEMLWCG 134

Query: 111 RCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPD-------NVSLEEGAM 163
            C  C  G  N C  +       V G+ A  V   A   + L +       +     G++
Sbjct: 135 HCRPCAEGFPNHCENLNELGFN-VDGAFAEYVKVDAKYAWSLRELEGVYEGDRLFLAGSL 193

Query: 164 CEPLSVGLHAC--RRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSV 221
            EP SV  +A   R   I P  NV+I+G GPIGL  +   +  GA ++++ +  + R ++
Sbjct: 194 VEPTSVAYNAVIVRGGGIRPGDNVVILGGGPIGLAAVAILKHAGASKVILSEPSEVRRNL 253

Query: 222 AKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRA---G 278
           AKELGAD+++  +   ++  E V       G G  +  +  G  + +   +        G
Sbjct: 254 AKELGADHVIDPTK--ENFVEAVLDY--TNGLGAKLFLEATGVPQLVWPQIEEVIWRARG 309

Query: 279 GKVCLVGMGHHEMTVPLTPAAV--REVDVVGVFRYK--NTWPLCLELLRSGKIDVKPLVT 334
               +  +   +  +PLT      R   +VG   +    T+P  + L+ SG +D+  +++
Sbjct: 310 INATVAIVARADAKIPLTGEVFQVRRAQIVGSQGHSGHGTFPRVISLMASG-MDMTKIIS 368

Query: 335 HRFGFSQKEVEEAFETSARGGTAIKVMF 362
                   E+ E  +      + +KV  
Sbjct: 369 KTVSME--EIPEYIKRLQTDKSLVKVTM 394

>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A* Length = 366

 Score =  297 bits (762), Expect = 4e-99
 Identities = 65/364 (17%), Positives = 125/364 (34%), Gaps = 45/364 (12%)

Query: 29  LKIQPFELPSL-GPYDVLVRMKAVGICGSDVHYLK--TLRCADFVVKEPMVIGHECAGVI 85
           ++++  +   L     + +R    GICG+D   +            K+ +V+GHE  GV+
Sbjct: 13  VQVKDVDEKKLDSYGKIKIRTIYNGICGADREIVNGKLTLSTLPKGKDFLVLGHEAIGVV 72

Query: 86  EKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFF--ATPPVHGSLANQVV 143
           E+          GD V       C  C +C  GR + C   +F       + G +     
Sbjct: 73  EESYHGFS---QGDLVMPVNRRGCGICRNCLVGRPDFCETGEFGEAGIHKMDGFMREWWY 129

Query: 144 HPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRA--------------NIGPETNVLIMG 189
                  K+P ++  + G + +PL+    +                         VL++G
Sbjct: 130 DDPKYLVKIPKSIE-DIGILAQPLADIEKSIEEILEVQKRVPVWTCDDGTLNCRKVLVVG 188

Query: 190 AGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQK 249
            GPIG++  L  R +G    +    +   +               TN  + +   +K++ 
Sbjct: 189 TGPIGVLFTLLFRTYGLEVWMANRREPTEVEQTVIEETK------TNYYNSSNGYDKLKD 242

Query: 250 AMGTGIDVSFDCAGFNKT-MSTALSATRAGGKVCLVGMGHHEMTVPLTPAAV-----REV 303
           ++G   DV  D  G +   +   +      G + L G      +VPL    +        
Sbjct: 243 SVG-KFDVIIDATGADVNILGNVIPLLGRNGVLGLFGFS-TSGSVPLDYKTLQEIVHTNK 300

Query: 304 DVVGVFRYKNT-WPLCLELLRSGKI----DVKPLVTHRFGFSQKEVEEAFETSARG-GTA 357
            ++G+   +   +   +  L S K       K L+T     +  + +E  +         
Sbjct: 301 TIIGLVNGQKPHFQQAVVHLASWKTLYPKAAKMLITKTVSIN--DEKELLKVLREKEHGE 358

Query: 358 IKVM 361
           IK+ 
Sbjct: 359 IKIR 362

>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1 Length = 380

 Score =  269 bits (689), Expect = 6e-88
 Identities = 87/354 (24%), Positives = 149/354 (42%), Gaps = 29/354 (8%)

Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
           L  + FE+  +    +LV + + G+CGSDVH  +     D  V  P+++GHE AG + +V
Sbjct: 30  LVYKEFEISDIPRGSILVEILSAGVCGSDVHMFRG---EDPRVPLPIILGHEGAGRVVEV 86

Query: 89  GSEVK-----TLVPGDRVALEPGISCWRCDHCK-GGRYNLCPEMKFFATP-------PVH 135
             E +      L PGD +    GI+C  C  CK      LCP  K +           + 
Sbjct: 87  NGEKRDLNGELLKPGDLIVWNRGITCGECYWCKVSKEPYLCPNRKVYGINRGCSEYPHLR 146

Query: 136 GSLANQ-VVHPADLCFKLPDNVSLEEGAMCEP-LSVGLHACRR-ANIGPETNVLIMGAGP 192
           G  ++  V+ P     K+ +   L+  AM     +   HA            V+I GAGP
Sbjct: 147 GCYSSHIVLDPETDVLKVSEKDDLDVLAMAMCSGATAYHAFDEYPESFAGKTVVIQGAGP 206

Query: 193 IGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVS-TNLQDIAEEVEKIQKAM 251
           +GL  ++ AR+ GA  ++++     RL +A+E+GAD  +    T++++  + +  I    
Sbjct: 207 LGLFGVVIARSLGAENVIVIAGSPNRLKLAEEIGADLTLNRRETSVEERRKAIMDI--TH 264

Query: 252 GTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAVR---EVDVVGV 308
           G G D   +  G ++ +       R GG   + G+   +  VP               G+
Sbjct: 265 GRGADFILEATGDSRALLEGSELLRRGGFYSVAGVAVPQDPVPFKVYEWLVLKNATFKGI 324

Query: 309 FRYKNT-WPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVM 361
           +    + +   + +       +  L+THR      E  +A E       A+KV+
Sbjct: 325 WVSDTSHFVKTVSITSRNYQLLSKLITHRLPLK--EANKALEL-MESREALKVI 375

>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A Length = 352

 Score =  236 bits (604), Expect = 1e-75
 Identities = 94/357 (26%), Positives = 148/357 (41%), Gaps = 26/357 (7%)

Query: 20  AAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGH 79
              +L +  +     E P+ GP+D +VR  AV  C SD+H +          +  M++GH
Sbjct: 3   GFAMLSIGKVGWIEKEKPAPGPFDAIVRPLAVAPCTSDIHTVFEGAIG---ERHNMILGH 59

Query: 80  ECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFF--ATPPVHGS 137
           E  G + +VGSEVK   PGDRV +      WR    + G +     M      +    G 
Sbjct: 60  EAVGEVVEVGSEVKDFKPGDRVVVPAITPDWRTSEVQRGYHQHSGGMLAGWKFSNVKDGV 119

Query: 138 LANQV-VHPADL-CFKLPDNVSLEEGAMC-EPLSVGLHACRRANIGPETNVLIMGAGPIG 194
                 V+ AD+    LP  + LE   M  + ++ G H    ANI     V ++G GP+G
Sbjct: 120 FGEFFHVNDADMNLAHLPKEIPLEAAVMIPDMMTTGFHGAELANIKLGDTVCVIGIGPVG 179

Query: 195 LVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTG 254
           L+++ GA   GA RI  V    +   +A E GA +I+       DI E++ K     G G
Sbjct: 180 LMSVAGANHLGAGRIFAVGSRKHCCDIALEYGATDIINYKN--GDIVEQILKATD--GKG 235

Query: 255 IDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAA----VREVDVVG--- 307
           +D      G   T + A+   + G  +  V        + +  +     +    + G   
Sbjct: 236 VDKVVIAGGDVHTFAQAVKMIKPGSDIGNVNYLGEGDNIDIPRSEWGVGMGHKHIHGGLC 295

Query: 308 -VFRYKNTWPLCLELLRSGKIDVKPLVTHRF-GFSQKEVEEAFET-SARGGTAIKVM 361
              R        ++L+   ++D   LVTH F GF    +E+AF     +    IK +
Sbjct: 296 PGGRL--RMERLIDLVFYKRVDPSKLVTHVFRGFD--NIEKAFMLMKDKPKDLIKPV 348

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A* Length = 347

 Score =  230 bits (590), Expect = 2e-73
 Identities = 95/332 (28%), Positives = 152/332 (45%), Gaps = 23/332 (6%)

Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVH-----YLKTLRCADFVVKEPMVIGHECAG 83
           L +Q   +P      VL++++A G+C SDVH     +       D  VK P+ +GHE AG
Sbjct: 13  LSLQEIGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHEIAG 72

Query: 84  VIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVV 143
            IE+VG EV     GD VA+ P      C +C+ G  +LC   ++       G+ A  V+
Sbjct: 73  KIEEVGDEVVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPRWLGI-NFDGAYAEYVI 131

Query: 144 HPADLCFKLPDNVSLEEGAMCEPLS-VGL---HACRRANIGPETNVLIMGA-GPIGLVTM 198
            P          ++  E A   PL+  G+    A R+A++ P   +L++GA G +G + +
Sbjct: 132 VPHYKYMYKLRRLNAVEAA---PLTCSGITTYRAVRKASLDPTKTLLVVGAGGGLGTMAV 188

Query: 199 LGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVS 258
             A+A     I+ VDV +  +  AK  GAD ++  S   QD   E+ +I +    G+D  
Sbjct: 189 QIAKAVSGATIIGVDVREEAVEAAKRAGADYVINASM--QDPLAEIRRITE--SKGVDAV 244

Query: 259 FDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY-KNTWPL 317
            D     KT+S    A    GK  +VG+   ++        + E+  VG     ++ +  
Sbjct: 245 IDLNNSEKTLSVYPKALAKQGKYVMVGLFGADLHYHAPLITLSEIQFVGSLVGNQSDFLG 304

Query: 318 CLELLRSGKIDVKPLVTHRFGFSQKEVEEAFE 349
            + L  +GK  VKP++T        E  EA +
Sbjct: 305 IMRLAEAGK--VKPMITKTMKLE--EANEAID 332

>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A* Length = 345

 Score =  221 bits (566), Expect = 6e-70
 Identities = 85/337 (25%), Positives = 137/337 (40%), Gaps = 25/337 (7%)

Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
             +     P+ GP ++L+++ A G+C SD+  +     A +    P+ +GHE  G + ++
Sbjct: 13  PVVVDIPTPTPGPGEILLKVTAAGLCHSDIFVMDMPA-AQYAYGLPLTLGHEGVGTVAEL 71

Query: 89  GSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPP----VHGSLANQVVH 144
           G  V     GD VA+     C  C  C  GR N C         P      GS+A  ++ 
Sbjct: 72  GEGVTGFGVGDAVAVYGPWGCGACHACARGRENYCTRAADLGITPPGLGSPGSMAEYMIV 131

Query: 145 PADLCFKLPDNVSLEEGA--MCEPLSVGLHACRR--ANIGPETNVLIMGAGPIGLVTMLG 200
            +        ++     A      L+   HA  R    +GP +  +++G G +G V +  
Sbjct: 132 DSARHLVPIGDLDPVAAAPLTDAGLTPY-HAISRVLPLLGPGSTAVVIGVGGLGHVGIQI 190

Query: 201 ARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD 260
            RA  A R++ VD+DD RL++A+E+GAD  VK        A+ + ++    G G    FD
Sbjct: 191 LRAVSAARVIAVDLDDDRLALAREVGADAAVKSGA---GAADAIRELTG--GQGATAVFD 245

Query: 261 CAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKNTW---PL 317
             G   T+ TA       G + +VG+                  VV    Y  T      
Sbjct: 246 FVGAQSTIDTAQQVVAVDGHISVVGIHAGAHAKVGFFMIPFGASVVTP--YWGTRSELME 303

Query: 318 CLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARG 354
            + L R+G++D   + T  F     E   A+     G
Sbjct: 304 VVALARAGRLD---IHTETFTLD--EGPAAYRRLREG 335

>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1 Length = 359

 Score =  213 bits (544), Expect = 1e-66
 Identities = 83/331 (25%), Positives = 147/331 (44%), Gaps = 24/331 (7%)

Query: 29  LKIQPFELPSL-GPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEK 87
           L+I+  + P L G +DV+VR+   G+C +D+H ++ +       K P  +GHE  G IE+
Sbjct: 28  LRIEDVDYPRLEGRFDVIVRIAGAGVCHTDLHLVQGMWHELLQPKLPYTLGHENVGYIEE 87

Query: 88  VGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPAD 147
           V   V+ L  GD V L P ++   C  C+ G    C  ++F     + G  A  +     
Sbjct: 88  VAEGVEGLEKGDPVILHPAVTDGTCLACRAGEDMHCENLEFPGL-NIDGGFAEFMRTSHR 146

Query: 148 LCFKLPDNVSLEEGAMCEPLS-VGL---HACRRA--NIGPETNVLIMGAGPIGLVTMLGA 201
              KLP ++S E+     PL+  G+    A ++A   + P   V I+G G +G + +   
Sbjct: 147 SVIKLPKDISREKLVEMAPLADAGITAYRAVKKAARTLYPGAYVAIVGVGGLGHIAVQLL 206

Query: 202 RAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDC 261
           +      ++ +DV + +L +A+ LGAD++V      +D  ++V ++ +  G G++V+ D 
Sbjct: 207 KVMTPATVIALDVKEEKLKLAERLGADHVVDAR---RDPVKQVMELTR--GRGVNVAMDF 261

Query: 262 AGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKNTW---PLC 318
            G   T+          G++ +VG G  E+  P       EV   G       +      
Sbjct: 262 VGSQATVDYTPYLLGRMGRLIIVGYG-GELRFPTIRVISSEVSFEGS--LVGNYVELHEL 318

Query: 319 LELLRSGKIDVKPLVTHRFGFSQKEVEEAFE 349
           + L   GK+    +          E+ +  E
Sbjct: 319 VTLALQGKVR---VEVDIHKLD--EINDVLE 344

>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus} Length = 344

 Score =  196 bits (501), Expect = 3e-60
 Identities = 74/333 (22%), Positives = 136/333 (40%), Gaps = 31/333 (9%)

Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
           L I+   +P     +VL+R+   G+C +D+   K +  A    + P+++GHE AG I +V
Sbjct: 16  LSIEDVNIPEPQGEEVLIRIGGAGVCRTDLRVWKGVE-AKQGFRLPIILGHENAGTIVEV 74

Query: 89  GSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADL 148
           G E+  +  GD V +        C +C+ G++N+C           +G  +  ++  +  
Sbjct: 75  G-ELAKVKKGDNVVVYATWGDLTCRYCREGKFNICKNQIIPGQT-TNGGFSEYMLVKSSR 132

Query: 149 CFKLPDNVSLEEGAMCEPLSV-GL---HACRRA----NIGPETNVLIMGAGPIGLVTMLG 200
                +++S  E A   PL+  G     A R+A    +   E  V++ G G + + T+  
Sbjct: 133 WLVKLNSLSPVEAA---PLADAGTTSMGAIRQALPFISKFAEPVVIVNGIGGLAVYTIQI 189

Query: 201 ARAFGA-PRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF 259
            +A      IV +         A ELGAD +      ++D    + K+    G G  ++ 
Sbjct: 190 LKALMKNITIVGISRSKKHRDFALELGADYVS----EMKDAESLINKLTD--GLGASIAI 243

Query: 260 DCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKNTWPLCL 319
           D  G  +T           G + LVGM    +++     AV    ++G      +     
Sbjct: 244 DLVGTEETTYNLGKLLAQEGAIILVGMEGKRVSLEAFDTAVWNKKLLGS--NYGSLNDLE 301

Query: 320 ELL---RSGKIDVKPLVTHRFGFSQKEVEEAFE 349
           +++    SGKI        +      ++ +AF 
Sbjct: 302 DVVRLSESGKIKP---YIIKVPLD--DINKAFT 329

>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1 Length = 371

 Score =  191 bits (488), Expect = 5e-58
 Identities = 85/368 (23%), Positives = 143/368 (38%), Gaps = 67/368 (18%)

Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
            ++Q  ++      +VLV++ A G+C +D+               P V+GHE +G+IE +
Sbjct: 19  FELQALKIRQPQGDEVLVKVVATGMCHTDLIVRDQKYPVPL----PAVLGHEGSGIIEAI 74

Query: 89  GSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMK--------------------- 127
           G  V  L  GD V L  G  C +C  C  G    C E                       
Sbjct: 75  GPNVTELQVGDHVVLSYG-YCGKCTQCNTGNPAYCSEFFGRNFSGADSEGNHALCTHDQG 133

Query: 128 -----FFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHAC-------- 174
                FFA      S A   +   +   K+  +V +E         +G   C        
Sbjct: 134 VVNDHFFAQ----SSFATYALSRENNTVKVTKDVPIEL--------LGPLGCGIQTGAGA 181

Query: 175 --RRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVK 232
                 + P ++ +  GAG +GL  +L A+  GA  I+ VD+ + RL +AK+LGA +++ 
Sbjct: 182 CINALKVTPASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRLELAKQLGATHVI- 240

Query: 233 VSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMT 292
              N +   + V  I++    G++ + +  G  + +   + A    GK+ +VG      T
Sbjct: 241 ---NSKT-QDPVAAIKEITDGGVNFALESTGSPEILKQGVDALGILGKIAVVGAPQLGTT 296

Query: 293 VPLTPAA--VREVDVVGVF----RYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEE 346
                    +    ++GV       K   P  + L + GK     LV   + F   E+ +
Sbjct: 297 AQFDVNDLLLGGKTILGVVEGSGSPKKFIPELVRLYQQGKFPFDQLVKF-YAFD--EINQ 353

Query: 347 AFETSARG 354
           A   S +G
Sbjct: 354 AAIDSRKG 361

>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A* Length = 376

 Score =  177 bits (450), Expect = 2e-52
 Identities = 89/361 (24%), Positives = 152/361 (42%), Gaps = 49/361 (13%)

Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
           L I+  E+      +V +++ A  +C +D++              P+V+GHECAG++E V
Sbjct: 21  LCIEEIEVSPPKACEVRIQVIATCVCPTDINATD----PKKKALFPVVLGHECAGIVESV 76

Query: 89  GSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATP---------------- 132
           G  V    PGD+V       C RC  C     NLC +++ F  P                
Sbjct: 77  GPGVTNFKPGDKVIPFFAPQCKRCKLCLSPLTNLCGKLRNFKYPTIDQELMEDRTSRFTC 136

Query: 133 ---PVH-----GSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLH-----ACRRANI 179
               ++      S +   V       ++ D  +LE       +  G       A   A +
Sbjct: 137 KGRSIYHFMGVSSFSQYTVVSEANLARVDDEANLERVC---LIGCGFSSGYGAAINTAKV 193

Query: 180 GPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQD 239
            P +   + G G +GL  ++G +  GA RI+ +D++  +   AK LGA + +    N ++
Sbjct: 194 TPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKALGATDCL----NPRE 249

Query: 240 IAEEV-EKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAG-GKVCLVGMGHHEMTVPLTP 297
           + + V + I +    G+D S DCAG  +T+  A+  T  G G   +VG    EMT+P   
Sbjct: 250 LDKPVQDVITELTAGGVDYSLDCAGTAQTLKAAVDCTVLGWGSCTVVGAKVDEMTIPTVD 309

Query: 298 AAVREVDVVGVF----RYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSAR 353
             +    + G F    +  ++ P  +   ++ K D+  LVTH   F    + +A +    
Sbjct: 310 -VILGRSINGTFFGGWKSVDSVPNLVSDYKNKKFDLDLLVTHALPFE--SINDAIDLMKE 366

Query: 354 G 354
           G
Sbjct: 367 G 367

>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida} Length = 398

 Score =  176 bits (449), Expect = 6e-52
 Identities = 80/370 (21%), Positives = 141/370 (38%), Gaps = 60/370 (16%)

Query: 41  PYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDR 100
            + V++++ +  ICGSD H  +      F+V +  V+GHE  G + + GS+V+ +  GD 
Sbjct: 32  EHAVILKVVSTNICGSDQHIYR----GRFIVPKGHVLGHEITGEVVEKGSDVELMDIGDL 87

Query: 101 VALEPGISCWRCDHCKGGRYNLCPEMKF----------FATPPVHGSLANQV-VHPADL- 148
           V++   ++C RC +CK  R ++C               F      G  A  V V  AD  
Sbjct: 88  VSVPFNVACGRCRNCKEARSDVCENNLVNPDADLGAFGFDLKGWSGGQAEYVLVPYADYM 147

Query: 149 CFKLPDNVSLEEG-----AMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARA 203
             K  D     E       + + L  G H C  A + P ++V I GAGP+G     GAR 
Sbjct: 148 LLKFGDKEQAMEKIKDLTLISDILPTGFHGCVSAGVKPGSHVYIAGAGPVGRCAAAGARL 207

Query: 204 FGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAM-GTGIDVSFDCA 262
            GA  +++ D +  RL +  + G + I     +L++ A   ++I + +    +D   D  
Sbjct: 208 LGAACVIVGDQNPERLKLLSDAGFETI-----DLRNSAPLRDQIDQILGKPEVDCGVDAV 262

Query: 263 GF--------------NKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAVREVDVV-- 306
           GF              N  +++     RAGG + + G+       P+   A      +  
Sbjct: 263 GFEAHGLGDEANTETPNGALNSLFDVVRAGGAIGIPGIYVGSDPDPVNKDAGSGRLHLDF 322

Query: 307 GVFRYKN------------TWPLCLELLRSGKIDVKP--LVTHRFGFSQKEVEEAFETSA 352
           G    K+                  E +   ++      +          +  + +    
Sbjct: 323 GKMWTKSIRIMTGMAPVTNYNRHLTEAILWDQMPYLSKVMNIEVITLD--QAPDGYAKFD 380

Query: 353 RGGTAIKVMF 362
           +G    K + 
Sbjct: 381 KGS-PAKFVI 389

>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A* Length = 373

 Score =  175 bits (446), Expect = 9e-52
 Identities = 93/366 (25%), Positives = 148/366 (40%), Gaps = 41/366 (11%)

Query: 20  AAWLLGVNT-LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIG 78
           AA        L I+  E+     ++V +++ A  +C +D +   TL  AD     P+++G
Sbjct: 9   AAVAWEAGKPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAY---TLSGADPEGCFPVILG 65

Query: 79  HECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATP------ 132
           H  AG++E VG  V  L  GD V       C  C  C   + NLC +++           
Sbjct: 66  HLGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLMPDG 125

Query: 133 ---------PVH-----GSLANQVVHPADLCFKLPDNVSLEEGAM--CEPLSVGLHAC-R 175
                     +       + +   V       K+     L++  +  C  +S G  A   
Sbjct: 126 TSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCG-ISTGYGAAVN 184

Query: 176 RANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVST 235
            A + P +   + G G +GL  ++G +  GA RI+ VD++  + + AKE GA   +    
Sbjct: 185 TAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATECI---- 240

Query: 236 NLQDIAEEV-EKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAG-GKVCLVGMGHHEMTV 293
           N QD ++ + E + +    G+D SF+C G  K M  AL A   G G   +VG+      +
Sbjct: 241 NPQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWGVSVVVGVAASGEEI 300

Query: 294 PLTPAA-VREVDVVGVF----RYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAF 348
              P   V      G      +   + P  +    S KI V   VTH   F   E+ +AF
Sbjct: 301 ATRPFQLVTGRTWKGTAFGGWKSVESVPKLVSEYMSKKIKVDEFVTHNLSFD--EINKAF 358

Query: 349 ETSARG 354
           E    G
Sbjct: 359 ELMHSG 364

>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A* Length = 373

 Score =  174 bits (443), Expect = 2e-51
 Identities = 85/353 (24%), Positives = 143/353 (40%), Gaps = 47/353 (13%)

Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
           L ++   +     ++V +++ A GICGSD   LK         K P+++GHE  GV+E +
Sbjct: 22  LSLETITVAPPKAHEVRIKILASGICGSDSSVLK----EIIPSKFPVILGHEAVGVVESI 77

Query: 89  GSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATP---------------P 133
           G+ V  + PGD+V       C  C  CK    N C +    A                 P
Sbjct: 78  GAGVTCVKPGDKVIPLFVPQCGSCRACKSSNSNFCEKNDMGAKTGLMADMTSRFTCRGKP 137

Query: 134 VH-----GSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHAC-RRANIGPETNVLI 187
           ++      +     V       K+     LE   +    + G  A    A + P +   +
Sbjct: 138 IYNLMGTSTFTEYTVVADIAVAKIDPKAPLESCLIGCGFATGYGAAVNTAKVTPGSTCAV 197

Query: 188 MGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEV-EK 246
            G G +G   ++G +A GA RI+ V     +   A ELGA   +    N +D  + + E 
Sbjct: 198 FGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIELGATECL----NPKDYDKPIYEV 253

Query: 247 IQKAMGTGIDVSFDCAGFNKTMSTALSATRAG-GKVCLVGMGHHEMTVPLTPAAVREVDV 305
           I +    G+D + +CAG  +TM  AL +T  G G   ++G+      +PL P     + +
Sbjct: 254 ICEKTNGGVDYAVECAGRIETMMNALQSTYCGSGVTVVLGLASPNERLPLDP-----LLL 308

Query: 306 VGVFRYKNTW---------PLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFE 349
           +     K +             ++     KI+V  LV+ +      ++ +AFE
Sbjct: 309 LTGRSLKGSVFGGFKGEEVSRLVDDYMKKKINVNFLVSTKLTLD--QINKAFE 359

>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1 Length = 398

 Score =  174 bits (443), Expect = 4e-51
 Identities = 74/371 (19%), Positives = 138/371 (37%), Gaps = 63/371 (16%)

Query: 41  PYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDR 100
            + V++++ +  ICGSD H ++         +  +V+GHE  G + + G +V+ L  GD 
Sbjct: 33  EHGVILKVVSTNICGSDQHMVR----GRTTAQVGLVLGHEITGEVIEKGRDVENLQIGDL 88

Query: 101 VALEPGISCWRCDHCKGGRYNLCPEMK---------FFATPPVHGSLANQVVHP-ADL-C 149
           V++   ++C RC  CK     +C  +          +       G  A  V+ P AD   
Sbjct: 89  VSVPFNVACGRCRSCKEMHTGVCLTVNPARAGGAYGYVDMGDWTGGQAEYVLVPYADFNL 148

Query: 150 FKLPDNVSLEEG-----AMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAF 204
            KLPD     E       + + L  G H    A +GP + V + GAGP+GL     AR  
Sbjct: 149 LKLPDRDKAMEKIRDLTCLSDILPTGYHGAVTAGVGPGSTVYVAGAGPVGLAAAASARLL 208

Query: 205 GAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGF 264
           GA  +++ D++  RL+ AK  G +      +    + E++  +       +D + D  GF
Sbjct: 209 GAAVVIVGDLNPARLAHAKAQGFEIA--DLSLDTPLHEQIAALLG--EPEVDCAVDAVGF 264

Query: 265 ---------------NKTMSTALSATRAGGKVCLVG-------------MGHHEMTVPLT 296
                             +++ +  TR  GK+ + G                  +++   
Sbjct: 265 EARGHGHEGAKHEAPATVLNSLMQVTRVAGKIGIPGLYVTEDPGAVDAAAKIGSLSIRFG 324

Query: 297 PAAVREVDVVG----VFRYKNTWPLCLELLRSGKIDVKPLV-THRFGFSQKEVEEAFETS 351
               +          V +Y       ++ +   +I++  +V          +    +   
Sbjct: 325 LGWAKSHSFHTGQTPVMKY---NRALMQAIMWDRINIAEVVGVQVISLD--DAPRGYGEF 379

Query: 352 ARGGTAIKVMF 362
              G   K + 
Sbjct: 380 DA-GVPKKFVI 389

>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ... Length = 374

 Score =  172 bits (439), Expect = 9e-51
 Identities = 93/361 (25%), Positives = 152/361 (42%), Gaps = 42/361 (11%)

Query: 20  AAWLLGVNT-LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIG 78
           AA L        I+  E+     ++V ++M A GIC SD H +        V   P++ G
Sbjct: 11  AAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVS----GTLVTPLPVIAG 66

Query: 79  HECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATP------ 132
           HE AG++E +G  V T+ PGD+V       C +C  CK    N C +             
Sbjct: 67  HEAAGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDG 126

Query: 133 ---------PVH-----GSLANQVVHPADLCFKLPDNVSLEEGAM--CEPLSVGLHAC-R 175
                    P+H      + +   V       K+     LE+  +  C   S G  +  +
Sbjct: 127 TSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCG-FSTGYGSAVK 185

Query: 176 RANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVST 235
            A +   +   + G G +GL  ++G +A GA RI+ VD++  + + AKE+GA   V    
Sbjct: 186 VAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECV---- 241

Query: 236 NLQDIAEEV-EKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAG-GKVCLVGMGHHEMTV 293
           N QD  + + E + +    G+D SF+  G   TM TALS  +   G   +VG+      +
Sbjct: 242 NPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDSQNL 301

Query: 294 PLTPAA-VREVDVVGVF----RYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAF 348
            + P   +      G      + K++ P  +    + K  + PL+TH   F   ++ E F
Sbjct: 302 SMNPMLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPFE--KINEGF 359

Query: 349 E 349
           +
Sbjct: 360 D 360

>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A* Length = 340

 Score =  166 bits (424), Expect = 7e-49
 Identities = 85/292 (29%), Positives = 130/292 (44%), Gaps = 32/292 (10%)

Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADF--VVKEPMVIGHECAGVIE 86
           L I    +P  GP  V V+++A G+C +D+H        D+      P + GHE  G + 
Sbjct: 15  LTIDEVPVPQPGPGQVQVKIEASGVCHTDLHAAD----GDWPVKPTLPFIPGHEGVGYVS 70

Query: 87  KVGSEVKTLVPGDRVALEPGI-----SCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQ 141
            VGS V  +  GDRV    G+     +C  C+HC  G   LC + +      V+G     
Sbjct: 71  AVGSGVSRVKEGDRV----GVPWLYSACGYCEHCLQGWETLCEKQQ-NTGYSVNGGYGEY 125

Query: 142 VVHPADLCFKLPDNVSLEEGA--MCEPLSVGL---HACRRANIGPETNVLIMGAGPIGLV 196
           VV   +    LPD V   E A  +C     G+      +  +  P   V+I G G +G V
Sbjct: 126 VVADPNYVGLLPDKVGFVEIAPILC----AGVTVYKGLKVTDTRPGQWVVISGIGGLGHV 181

Query: 197 TMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGID 256
            +  ARA G  R+  VD+DD +L++A+ LGA+  V  + +  D A     +QK +G G  
Sbjct: 182 AVQYARAMGL-RVAAVDIDDAKLNLARRLGAEVAV-NARD-TDPAAW---LQKEIG-GAH 234

Query: 257 VSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGV 308
                A   K  S A+   R GG + L G+   +   P+    ++ + + G 
Sbjct: 235 GVLVTAVSPKAFSQAIGMVRRGGTIALNGLPPGDFGTPIFDVVLKGITIRGS 286

>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1 Length = 374

 Score =  166 bits (423), Expect = 2e-48
 Identities = 89/365 (24%), Positives = 147/365 (40%), Gaps = 40/365 (10%)

Query: 20  AAWLLGVNT-LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIG 78
           AA     N  L I+  E+      ++ +++ A G+C +D++    L         P+V+G
Sbjct: 11  AAVAWEANKPLVIEEIEVDVPHANEIRIKIIATGVCHTDLY---HLFEGKHKDGFPVVLG 67

Query: 79  HECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATP------ 132
           HE AG++E VG  V    PG++V       C  C  C+  + N C +     +P      
Sbjct: 68  HEGAGIVESVGPGVTEFQPGEKVIPLFISQCGECRFCQSPKTNQCVKGWANESPDVMSPK 127

Query: 133 ---------PVH-----GSLANQVVHPADLCFKLPDNVSLEEGAM--CEPLSVGLHAC-R 175
                     V       + +   V       K+  +  L+   +  C  +S G  A   
Sbjct: 128 ETRFTCKGRKVLQFLGTSTFSQYTVVNQIAVAKIDPSAPLDTVCLLGCG-VSTGFGAAVN 186

Query: 176 RANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVST 235
            A + P +   + G G +GL  ++G  + GA RI+ VD++  +   AK  GA + V    
Sbjct: 187 TAKVEPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVFGATDFV---- 242

Query: 236 NLQDIAEEV-EKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAG-GKVCLVGMGHHEM-- 291
           N  D +E + + + K    G+D S +C G    M  AL +   G G   LVG        
Sbjct: 243 NPNDHSEPISQVLSKMTNGGVDFSLECVGNVGVMRNALESCLKGWGVSVLVGWTDLHDVA 302

Query: 292 TVPLTPAAVREVD--VVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFE 349
           T P+   A R     + G F+ K+  P  ++     K+ +   +THR       V +A +
Sbjct: 303 TRPIQLIAGRTWKGSMFGGFKGKDGVPKMVKAYLDKKVKLDEFITHRMPLE--SVNDAID 360

Query: 350 TSARG 354
               G
Sbjct: 361 LMKHG 365

>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A Length = 339

 Score =  163 bits (414), Expect = 2e-47
 Identities = 97/291 (33%), Positives = 144/291 (49%), Gaps = 32/291 (10%)

Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADF--VVKEPMVIGHECAGVIE 86
           LKI+  E P++   +VLVR+KA G+C +D+H        D+    K P++ GHE  G++E
Sbjct: 13  LKIKEVEKPTISYGEVLVRIKACGVCHTDLHAAH----GDWPVKPKLPLIPGHEGVGIVE 68

Query: 87  KVGSEVKTLVPGDRVALEPGI-----SCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQ 141
           +VG  V  L  GDRV    GI     +C  CD+C  G+  LC   K  A   V G  A  
Sbjct: 69  EVGPGVTHLKVGDRV----GIPWLYSACGHCDYCLSGQETLCEHQK-NAGYSVDGGYAEY 123

Query: 142 VVHPADLCFKLPDNVSLEEGA--MCEPLSVGL---HACRRANIGPETNVLIMGAGPIGLV 196
               AD   K+PDN+S EE A   C     G+    A +     P   V I G G +G V
Sbjct: 124 CRAAADYVVKIPDNLSFEEAAPIFC----AGVTTYKALKVTGAKPGEWVAIYGIGGLGHV 179

Query: 197 TMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGID 256
            +  A+A G   +V VD+ D +L +AKELGAD +V      +D A+    +++ +G G+ 
Sbjct: 180 AVQYAKAMGL-NVVAVDIGDEKLELAKELGADLVV-NPLK-EDAAKF---MKEKVG-GVH 232

Query: 257 VSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAVREVDVVG 307
            +   A       +A ++ R GG   LVG+   EM +P+    +  + ++G
Sbjct: 233 AAVVTAVSKPAFQSAYNSIRRGGACVLVGLPPEEMPIPIFDTVLNGIKIIG 283

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae} Length = 347

 Score =  157 bits (400), Expect = 2e-45
 Identities = 73/301 (24%), Positives = 119/301 (39%), Gaps = 48/301 (15%)

Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADF--VVKEPMVIGHECAGVIE 86
           L+ +   +P     ++L+ +K  G+C +D+H        D+   VK P+V GHE AGV+ 
Sbjct: 18  LEYKDIPVPKPKANELLINVKYSGVCHTDLHAWH----GDWPLPVKLPLVGGHEGAGVVV 73

Query: 87  KVGSEVKTLVPGDRVALEPGI-----SCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQ 141
            +G  VK    GD      GI     SC  C++C+ G  + CP     +     GS    
Sbjct: 74  GMGENVKGWKIGDYA----GIKWLNGSCMACEYCELGNESNCPHAD-LSGYTHDGSFQQY 128

Query: 142 VVHPADLCFKLPDNVSLEEGA--MC------EPLSVGLHACRRANIGPETNVLIMGAGPI 193
               A     +P    L + A  +C      + L       + AN+     V I GA   
Sbjct: 129 ATADAVQAAHIPQGTDLAQVAPILCAGITVYKAL-------KSANLMAGHWVAISGAAG- 180

Query: 194 GLVTMLG------ARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKI 247
           G    LG      A+A G  R++ +D  + +  + + +G +  +   T  +DI   V   
Sbjct: 181 G----LGSLAVQYAKAMGY-RVLGIDGGEGKEELFRSIGGEVFI-DFTKEKDIVGAV--- 231

Query: 248 QKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGM-GHHEMTVPLTPAAVREVDVV 306
            KA   G     + +     +  +    RA G   LVGM    +    +    V+ + +V
Sbjct: 232 LKATDGGAHGVINVSVSEAAIEASTRYVRANGTTVLVGMPAGAKCCSDVFNQVVKSISIV 291

Query: 307 G 307
           G
Sbjct: 292 G 292

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus} Length = 343

 Score =  156 bits (398), Expect = 5e-45
 Identities = 99/342 (28%), Positives = 149/342 (43%), Gaps = 26/342 (7%)

Query: 19  MAAWLL----GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEP 74
           M A ++    G   L++    +P  GP +V VR+KA  +   DV   K +      +  P
Sbjct: 1   MRAVVMRARGGPEVLEVADLPVPEPGPKEVRVRLKAAALNHLDVWVRKGVASPK--LPLP 58

Query: 75  MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPV 134
            V+G + +GV++ VG  V+   PGD V + PG+SC RC+ C  G  NLCP  +       
Sbjct: 59  HVLGADGSGVVDAVGPGVEGFAPGDEVVINPGLSCGRCERCLAGEDNLCPRYQILGEHR- 117

Query: 135 HGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGL---HA-CRRANIGPETNVLIMGA 190
           HG+ A  VV P       P N+S EE A   PL   L        +  + P  +VL+M A
Sbjct: 118 HGTYAEYVVLPEANLAPKPKNLSFEEAA-AIPL-TFLTAWQMVVDKLGVRPGDDVLVMAA 175

Query: 191 -GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQK 249
              + +  +  A+ FGA  I     +D +L  AK LGAD  V  +    D  +EV ++  
Sbjct: 176 GSGVSVAAIQIAKLFGARVIATAGSED-KLRRAKALGADETVNYTH--PDWPKEVRRLTG 232

Query: 250 AMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVG-MGHHEMTVPLTPAAVREVDVVGV 308
             G G D   D  G        + AT  GG++ + G    +E T+P      R++ ++G 
Sbjct: 233 --GKGADKVVDHTG-ALYFEGVIKATANGGRIAIAGASSGYEGTLPFAHVFYRQLSILGS 289

Query: 309 F-RYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFE 349
               K+     L  +  GK+  KP+V            E   
Sbjct: 290 TMASKSRLFPILRFVEEGKL--KPVVGQVLPLE--AAAEGHR 327

>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021} Length = 363

 Score =  154 bits (392), Expect = 5e-44
 Identities = 80/350 (22%), Positives = 132/350 (37%), Gaps = 37/350 (10%)

Query: 19  MAAWLL---GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDV-----HYLKTLRCADFV 70
           M  W       + LK+    +P  G +D++VR  AV +   D                  
Sbjct: 28  MQEWSTETVAPHDLKLAERPVPEAGEHDIIVRTLAVSLNYRDKLVLETGM-------GLD 80

Query: 71  VKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFA 130
           +  P V   + +GV+E VG  V    PGDRV                GR           
Sbjct: 81  LAFPFVPASDMSGVVEAVGKSVTRFRPGDRVISTFAPGWLDGLRPGTGR----TPAYETL 136

Query: 131 TPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGL---HA-CRRANIGPETNVL 186
                G L+  VV P       P ++   E +   P   GL    A   + ++     V+
Sbjct: 137 GGAHPGVLSEYVVLPEGWFVAAPKSLDAAEAS-TLPC-AGLTAWFALVEKGHLRAGDRVV 194

Query: 187 IMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEK 246
           + G G + L  +  A+A GA  IV     + +L  A  LGAD+ +      +D  E V  
Sbjct: 195 VQGTGGVALFGLQIAKATGAEVIVTSSSRE-KLDRAFALGADHGINRLE--EDWVERVYA 251

Query: 247 IQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVG-MGHHEMTVPLTPAAVREVDV 305
           +      G D   + AG    +  +L A    G++ ++G +   E++ P+ P  ++   V
Sbjct: 252 LTG--DRGADHILEIAG-GAGLGQSLKAVAPDGRISVIGVLEGFEVSGPVGPLLLKSPVV 308

Query: 306 VGVF-RYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARG 354
            G+   ++      +  +    +  KP++  R+ F+  EV EA     RG
Sbjct: 309 QGISVGHRRALEDLVGAVDRLGL--KPVIDMRYKFT--EVPEALAHLDRG 354

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A Length = 447

 Score =  154 bits (391), Expect = 3e-43
 Identities = 73/362 (20%), Positives = 127/362 (35%), Gaps = 46/362 (12%)

Query: 25  GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKE----------- 73
              +L++    +P L P +VLV + A  I  + V          F   +           
Sbjct: 46  VRKSLRLGEVPMPELAPDEVLVAVMASSINYNTVWSAMFEPIPTFHFLKQNARQGGWATR 105

Query: 74  ----PMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFF 129
                 V+G +C+GV+ + G  V+   PGD V + P       +    G   L  E + +
Sbjct: 106 HDQPYHVLGSDCSGVVVRTGIGVRRWKPGDHVIVHPAH-VDEQEPATHGDGMLGTEQRAW 164

Query: 130 ATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVG-----LHACRRANIGPETN 184
                 G LA   V  A      P +++ EE A   PL  G     L + R A +     
Sbjct: 165 GFETNFGGLAEYGVVRASQLLPKPAHLTWEEAA-VSPLCAGTAYRMLVSDRGAQMKQGDI 223

Query: 185 VLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIV------------ 231
           VLI GA G +G   +   +  G   + +V     + +  + LG D ++            
Sbjct: 224 VLIWGASGGLGSYAIQFVKNGGGIPVAVVSSAQ-KEAAVRALGCDLVINRAELGITDDIA 282

Query: 232 -KVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVG-MGHH 289
                 ++   +  + + +  G   D+ F+  G   T   ++   R GG V   G    +
Sbjct: 283 DDPRRVVETGRKLAKLVVEKAGREPDIVFEHTG-RVTFGLSVIVARRGGTVVTCGSSSGY 341

Query: 290 EMTVPLTPAAVREVDVVGVF--RYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEA 347
             T       ++   +VG     ++        L  SG +   P ++  +  +  E  EA
Sbjct: 342 LHTFDNRYLWMKLKKIVGSHGANHEEQQAT-NRLFESGAV--VPAMSAVYPLA--EAAEA 396

Query: 348 FE 349
             
Sbjct: 397 CR 398

>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A Length = 456

 Score =  154 bits (390), Expect = 6e-43
 Identities = 76/381 (19%), Positives = 132/381 (34%), Gaps = 57/381 (14%)

Query: 14  GEEVNMAAWLL-----GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDV---------- 58
            +E  M A L         ++ +    +P LGP + LV + A  +  + V          
Sbjct: 38  KDETEMFAGLETRDKDPRKSIHLDDVPVPELGPGEALVAVMASSVNYNSVHTSIFEPLST 97

Query: 59  --HYLKTLRCADFVVKEPM---VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCD 113
                +  R +D   +  +   VIG + AGV+ + G  V     GD V      S     
Sbjct: 98  FGFLERYGRVSDLAKRHDLPYHVIGSDLAGVVLRTGPGVNAWQAGDEVVAHCL-SVELES 156

Query: 114 HCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVG--- 170
                   L PE + +      G LA   +  ++     PD++S EE A    L      
Sbjct: 157 SDGHNDTMLDPEQRIWGFETNFGGLAEIALVKSNQLMPKPDHLSWEEAA-APGLVNSTAY 215

Query: 171 --LHACRRANIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDV-DDYRLSVAKELG 226
             L +   A +    NVLI GA G +G      A A GA    I  V    +  + + +G
Sbjct: 216 RQLVSRNGAGMKQGDNVLIWGASGGLGSYATQFALAGGA--NPICVVSSPQKAEICRAMG 273

Query: 227 ADNIV---------------KVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTA 271
           A+ I+               +     +   + + ++    G  ID+ F+  G  +T   +
Sbjct: 274 AEAIIDRNAEGYRFWKDENTQDPKEWKRFGKRIRELTG--GEDIDIVFEHPG-RETFGAS 330

Query: 272 LSATRAGGKVCLVG-MGHHEMTVPLTPAAVREVDVVGVF--RYKNTWPLCLELLRSGKID 328
           +  TR GG +        +          +    ++G     Y+  W     L+  G+I 
Sbjct: 331 VFVTRKGGTITTCASTSGYMHEYDNRYLWMSLKRIIGSHFANYREAWEA-NRLIAKGRI- 388

Query: 329 VKPLVTHRFGFSQKEVEEAFE 349
             P ++  +     +  +A  
Sbjct: 389 -HPTLSKVYSLE--DTGQAAY 406

>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A Length = 357

 Score =  135 bits (342), Expect = 7e-37
 Identities = 60/360 (16%), Positives = 119/360 (33%), Gaps = 68/360 (18%)

Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCAD---FVVKEPMVIGHECAGVI 85
           ++++  EL ++   DV V+M A  I  SD+              + + P V G+E    +
Sbjct: 42  VELKNLELAAVRGSDVRVKMLAAPINPSDI-----NMIQGNYGLLPELPAVGGNEGVAQV 96

Query: 86  EKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHP 145
             VGS V  L PGD V                                  G+   + V  
Sbjct: 97  VAVGSNVTGLKPGDWVI---------------------------PANAGLGTWRTEAVFS 129

Query: 146 ADLCFKLPDNVSLEEGAMCEPLSV----GLHAC-RRANIGPETNVLIMGA-GPIGLVTML 199
            +   ++P ++ L+  A    L V              + P  +V+   +   +G   + 
Sbjct: 130 EEALIQVPSDIPLQSAAT---LGVNPCTAYRMLMDFEQLQPGDSVIQNASNSGVGQAVIQ 186

Query: 200 GARAFGAPRIVIV---DVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGID 256
            A A G   I +V             K LGA++++          E     +        
Sbjct: 187 IAAALGLRTINVVRDRPDIQKLSDRLKSLGAEHVITEEE--LRRPEMKNFFKD--MPQPR 242

Query: 257 VSFDCAGFNKTMSTALSATRAGGKVCLVG-MGHHEMTVPLTPAAVREVDVVGVF------ 309
           ++ +C G  K+ +  L     GG +   G M    +   ++    +++ + G +      
Sbjct: 243 LALNCVG-GKSSTELLRQLARGGTMVTYGGMAKQPVVASVSLLIFKDLKLRGFWLSQWKK 301

Query: 310 -----RYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL 364
                ++K       +L+R G++        +      + + A E S +   + K +  +
Sbjct: 302 DHSPDQFKELILTLCDLIRRGQL--TAPACSQVPLQ--DYQSALEASMKPFISSKQILTM 357

>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A Length = 364

 Score =  132 bits (334), Expect = 1e-35
 Identities = 55/378 (14%), Positives = 114/378 (30%), Gaps = 74/378 (19%)

Query: 26  VNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLK-------TLRCADFVVKEPMVIG 78
           V   +    +  +L P +V+V+     +  SD++ ++                +     G
Sbjct: 18  VLFTQSFEIDDDNLAPNEVIVKTLGSPVNPSDINQIQGVYPSKPAKTTGFGTTEPAAPCG 77

Query: 79  HECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSL 138
           +E    + KVGS V +L  GD V                             +    G+ 
Sbjct: 78  NEGLFEVIKVGSNVSSLEAGDWVI---------------------------PSHVNFGTW 110

Query: 139 ANQVVHPADLCFKL-----------PDNVSLEEGAMCEPLSV----GLHAC-RRANIGPE 182
               +   D   KL           P+ +++ +GA    +SV              + P 
Sbjct: 111 RTHALGNDDDFIKLPNPAQSKANGKPNGLTINQGAT---ISVNPLTAYLMLTHYVKLTPG 167

Query: 183 TNVLIMGA--GPIGLVTMLGARAFGAPRIVIV---DVDDYRLSVAKELGADNIVKVST-N 236
            +  I       +G       +      I ++      D  ++  KELGA  ++     N
Sbjct: 168 KDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKELGATQVITEDQNN 227

Query: 237 LQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVG-MGHHEMTVPL 295
            ++    +++  K  G    ++ +C G  K+ +         G +   G M    +T+P 
Sbjct: 228 SREFGPTIKEWIKQSGGEAKLALNCVG-GKSSTGIARKLNNNGLMLTYGGMSFQPVTIPT 286

Query: 296 TPAAVREVDVVGVF----------RYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQ-KEV 344
           +    +     G +             +T    +     GK+      +    +   K +
Sbjct: 287 SLYIFKNFTSAGFWVTELLKNNKELKTSTLNQIIAWYEEGKL--TDAKSIETLYDGTKPL 344

Query: 345 EEAFETSARGGTAIKVMF 362
            E ++         K + 
Sbjct: 345 HELYQDGVANSKDGKQLI 362

>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A Length = 360

 Score =  127 bits (322), Expect = 6e-34
 Identities = 72/295 (24%), Positives = 118/295 (40%), Gaps = 45/295 (15%)

Query: 25  GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGV 84
                K   ++      +D+ ++++A G+CGSD+H           +K P+V+GHE  G 
Sbjct: 17  DWKNPKKTKYDPKPFYDHDIDIKIEACGVCGSDIH---CAAGHWGNMKMPLVVGHEIVGK 73

Query: 85  IEKVGSEVKTLV-PGDRVALEPGI-----SCWRCDHCKGGRYNLCPEMKF-FATPPVHGS 137
           + K+G +  + +  G RV    G+     SC  CD CK      C +    ++ P   G 
Sbjct: 74  VVKLGPKSNSGLKVGQRV----GVGAQVFSCLECDRCKNDNEPYCTKFVTTYSQPYEDGY 129

Query: 138 L-----ANQVVHPADLCFKLPDNVSLEEGA--MC------EPLSVGLHACRRANIGPETN 184
           +     AN V         +P+N+     A  +C       PL        R   GP   
Sbjct: 130 VSQGGYANYVRVHEHFVVPIPENIPSHLAAPLLCGGLTVYSPL-------VRNGCGPGKK 182

Query: 185 VLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEV 244
           V I+G G IG +  L ++A GA   VI      R   A ++GAD+ +  +       EE 
Sbjct: 183 VGIVGLGGIGSMGTLISKAMGAETYVISRSSRKR-EDAMKMGADHYI-ATL------EEG 234

Query: 245 EKIQKAMGTGIDVSFDCAGFNKTMSTA--LSATRAGGKVCLVGMGHHEMTVPLTP 297
           +  +K   T  D+   CA     +       A + GG++  + +      + L P
Sbjct: 235 DWGEKYFDT-FDLIVVCASSLTDIDFNIMPKAMKVGGRIVSISIPEQHEMLSLKP 288

>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A* Length = 366

 Score =  121 bits (307), Expect = 9e-32
 Identities = 75/289 (25%), Positives = 123/289 (42%), Gaps = 43/289 (14%)

Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
           L    F   + G  DV  ++   G+C SD+H   +++        P+V GHE  G + +V
Sbjct: 29  LSPFNFSRRATGEEDVRFKVLYCGVCHSDLH---SIKNDWGFSMYPLVPGHEIVGEVTEV 85

Query: 89  GSEVKTLVPGDRVALEPGI-----SCWRCDHCKGGRYNLCPEM------KFFATPPVHGS 137
           GS+VK +  GD+V    G+     +C  C+ C     N CP+M       +      +G 
Sbjct: 86  GSKVKKVNVGDKV----GVGCLVGACHSCESCANDLENYCPKMILTYASIYHDGTITYGG 141

Query: 138 LANQVVHPADLCFKLPDNVSLEEGA--MC------EPLSVGLHACRRANIG-PETNVLIM 188
            +N +V       + PDN+ L+ GA  +C       PL       +   +  P  ++ I+
Sbjct: 142 YSNHMVANERYIIRFPDNMPLDGGAPLLCAGITVYSPL-------KYFGLDEPGKHIGIV 194

Query: 189 GAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQ 248
           G G +G V +  A+AFG+   VI      +    K  GAD+ + VS +        E++Q
Sbjct: 195 GLGGLGHVAVKFAKAFGSKVTVISTSPSKKEEALKNFGADSFL-VSRD-------QEQMQ 246

Query: 249 KAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTP 297
            A GT +D   D       +       ++ GK+ LVG     + +P   
Sbjct: 247 AAAGT-LDGIIDTVSAVHPLLPLFGLLKSHGKLILVGAPEKPLELPAFS 294

>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii} Length = 321

 Score =  119 bits (302), Expect = 2e-31
 Identities = 63/358 (17%), Positives = 114/358 (31%), Gaps = 64/358 (17%)

Query: 19  MAAWLL----GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVH------YLKTLRCAD 68
           M A           LK+     P      +L+++ A  +   D        ++      +
Sbjct: 7   MKAIQFDQFGPPKVLKLVDTPTPEYRKNQMLIKVHAASLNPIDYKTRNGSGFVAKKLKNN 66

Query: 69  FVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKF 128
                P  +G++ +G + ++GS+V  +  GD+V    G                      
Sbjct: 67  L----PSGLGYDFSGEVIELGSDVNNVNIGDKVMGIAGF--------------------- 101

Query: 129 FATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGL---HACRRANIGPETNV 185
              P      A  V    D   +  + +S  + A   P   GL    A  +A +     V
Sbjct: 102 ---PDHPCCYAEYVCASPDTIIQKLEKLSFLQAA-SLPT-AGLTALQALNQAEVKQGDVV 156

Query: 186 LIMG-AGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEV 244
           LI   AG +G + +  A+  G    VI        +  K LGA+  +      +D    +
Sbjct: 157 LIHAGAGGVGHLAIQLAKQKGT--TVITTASKRNHAFLKALGAEQCINYHE--EDFLLAI 212

Query: 245 EKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAVREVD 304
                   T +D   D  G       ++   +  G   +V +        +  A  +   
Sbjct: 213 -------STPVDAVIDLVG-GDVGIQSIDCLKETGC--IVSVPTITAGRVIEVAKQKHRR 262

Query: 305 VVGVFRYKNTWPL--CLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKV 360
             G+ +  N   L    +L+   K+  +  ++  F  S  E   A E    G    K+
Sbjct: 263 AFGLLKQFNIEELHYLGKLVSEDKL--RIEISRIFQLS--EAVTAHELLETGHVRGKL 316

>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A* Length = 357

 Score =  120 bits (303), Expect = 3e-31
 Identities = 68/294 (23%), Positives = 117/294 (39%), Gaps = 43/294 (14%)

Query: 34  FELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVK 93
           + L   GP DV +R+   GIC +D+H     +    +   PMV GHE  G + +VGS+V 
Sbjct: 27  YTLRETGPEDVNIRIICCGICHTDLH---QTKNDLGMSNYPMVPGHEVVGEVVEVGSDVS 83

Query: 94  TLVPGDRVALEPGI-----SCWRCDHCKGGRYNLCPEM------KFFATPPVHGSLANQV 142
               GD V    G+      C  C  C+      CP+        +    P  G  A   
Sbjct: 84  KFTVGDIV----GVGCLVGCCGGCSPCERDLEQYCPKKIWSYNDVYINGQPTQGGFAKAT 139

Query: 143 VHPADLCFKLPDNVSLEEGA--MC------EPLSVGLHACRRANIG-PETNVLIMGAGPI 193
           V       K+P+ +++E+ A  +C       PL           +  P     I+G G +
Sbjct: 140 VVHQKFVVKIPEGMAVEQAAPLLCAGVTVYSPL-------SHFGLKQPGLRGGILGLGGV 192

Query: 194 GLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGT 253
           G + +  A+A G    VI   +  R    ++LGAD+ V + ++         K+ +   +
Sbjct: 193 GHMGVKIAKAMGHHVTVISSSNKKREEALQDLGADDYV-IGSD-------QAKMSELADS 244

Query: 254 GIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAVREVDVVG 307
            +D   D    +  +   LS  +  GK+ L+G+ ++ +        +    + G
Sbjct: 245 -LDYVIDTVPVHHALEPYLSLLKLDGKLILMGVINNPLQFLTPLLMLGRKVITG 297

>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori} Length = 348

 Score =  119 bits (302), Expect = 4e-31
 Identities = 67/292 (22%), Positives = 107/292 (36%), Gaps = 50/292 (17%)

Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
            K   F   ++GP DVL+ +   GIC SD+H   +          PM+ GHE AG+I++V
Sbjct: 17  FKPHDFSRHAVGPRDVLIDILYAGICHSDIH---SAYSEWKEGIYPMIPGHEIAGIIKEV 73

Query: 89  GSEVKTLVPGDRVALEPGI-----SCWRCDHCKGGRYNLCPEM--------KFFATPPVH 135
           G  VK    GD V    G+     SC  C  CK  +   C ++         F    P  
Sbjct: 74  GKGVKKFKIGDVV----GVGCFVNSCKACKPCKEHQEQFCTKVVFTYDCLDSFHDNEPHM 129

Query: 136 GSLANQVVHPADLCFKLPDNVSLEEGA--MC------EPLSVGLHACRRANIGPETNVLI 187
           G  +N +V   +    +  N  LE+ A  +C       PL       + + +   T V +
Sbjct: 130 GGYSNNIVVDENYVISVDKNAPLEKVAPLLCAGITTYSPL-------KFSKVTKGTKVGV 182

Query: 188 MGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKI 247
            G G +G + +  A A GA   V    +  +   A  +G  +                  
Sbjct: 183 AGFGGLGSMAVKYAVAMGAEVSVFARNEHKK-QDALSMGVKHFY-TDP------------ 228

Query: 248 QKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAA 299
           ++     +D        +  +   L      G + LVG+   E+   L+   
Sbjct: 229 KQCKEE-LDFIISTIPTHYDLKDYLKLLTYNGDLALVGLPPVEVAPVLSVFD 279

>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1 Length = 369

 Score =  116 bits (294), Expect = 6e-30
 Identities = 65/279 (23%), Positives = 100/279 (35%), Gaps = 45/279 (16%)

Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
           L+         GP DV + +   G+C SD+H    +R        P V GHE  G +  V
Sbjct: 35  LEPMDITRREPGPNDVKIEIAYCGVCHSDLH---QVRSEWAGTVYPCVPGHEIVGRVVAV 91

Query: 89  GSEVKTLVPGDRVALEPGI-----SCWRCDHCKGGRYNLCPEMKF-------FATPPVHG 136
           G +V+   PGD V    G+     SC  C+ C+ G  N C  M                G
Sbjct: 92  GDQVEKYAPGDLV----GVGCIVDSCKHCEECEDGLENYCDHMTGTYNSPTPDEPGHTLG 147

Query: 137 SLANQVVHPADLCFKLPDNVSLEEGA---MC------EPLSVGLHACRRANIGPETNVLI 187
             + Q+V       ++             +C       PL       R    GP   V +
Sbjct: 148 GYSQQIVVHERYVLRIRHPQEQLAAVAPLLCAGITTYSPL-------RHWQAGPGKKVGV 200

Query: 188 MGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKI 247
           +G G +G + +  A A GA  +     +  R   AK LGAD +V  S N        +++
Sbjct: 201 VGIGGLGHMGIKLAHAMGAHVVAFTTSEAKR-EAAKALGADEVV-NSRN-------ADEM 251

Query: 248 QKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGM 286
              + +  D   +       +    +  +  G + LVG 
Sbjct: 252 AAHLKS-FDFILNTVAAPHNLDDFTTLLKRDGTMTLVGA 289

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP} Length = 333

 Score =  116 bits (292), Expect = 6e-30
 Identities = 69/268 (25%), Positives = 116/268 (43%), Gaps = 40/268 (14%)

Query: 25  GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGV 84
           G +    +  ++ S GP  V +R  A+G+   D ++   +     V + P+V+G E A V
Sbjct: 12  GPDNFVWEEVKVGSPGPGQVRLRNTAIGVNFLDTYHRAGIPHPLVVGEPPIVVGFEAAAV 71

Query: 85  IEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVH 144
           +E+VG  V     G+RV                              PP+ G+ + + ++
Sbjct: 72  VEEVGPGVTDFTVGERVC--------------------------TCLPPL-GAYSQERLY 104

Query: 145 PADLCFKLPDNVSLEEGAMCEPLSVGLHAC----RRANIGPETNVLIM-GAGPIGLVTML 199
           PA+   K+P ++ L++  +   +  G+ A     +   + P   VLI   AG +G + + 
Sbjct: 105 PAEKLIKVPKDLDLDDVHLAGLMLKGMTAQYLLHQTHKVKPGDYVLIHAAAGGMGHIMVP 164

Query: 200 GARAFGAPRIVIVDV-DDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVS 258
            AR  GA   VI  V  + +   A++LG  + +  ST  QD AE V +I    G G+DV 
Sbjct: 165 WARHLGA--TVIGTVSTEEKAETARKLGCHHTINYST--QDFAEVVREITG--GKGVDVV 218

Query: 259 FDCAGFNKTMSTALSATRAGGKVCLVGM 286
           +D  G   T+  +L   R  G     G 
Sbjct: 219 YDSIG-KDTLQKSLDCLRPRGMCAAYGH 245

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus} Length = 342

 Score =  115 bits (291), Expect = 1e-29
 Identities = 83/379 (21%), Positives = 130/379 (34%), Gaps = 71/379 (18%)

Query: 6   MSQGEKEDGEEVNMAAWLL----GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYL 61
           M   E +     +M A       G   L     E P  GP  V+V +KA G+C  D    
Sbjct: 9   MGTLEAQTQGPGSMKAIQAQSLSGPEGLVYTDVETPGAGPNVVVVDVKAAGVCFPDY--- 65

Query: 62  KTLRCAD---FVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGG 118
             L         ++ P V G E AGV+     E   + PGDRV                 
Sbjct: 66  --LMTKGEYQLKMEPPFVPGIETAGVVRSAP-EGSGIKPGDRVMAFNF------------ 110

Query: 119 RYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVG--LHA-CR 175
                            G  A +V          P  +   E       +      A  R
Sbjct: 111 ----------------IGGYAERVAVAPSNILPTPPQLDDAEAV-ALIANYHTMYFAYAR 153

Query: 176 RANIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVS 234
           R  +     VL++GA G IG   +  A+  GA  I +V+         K +GAD ++ + 
Sbjct: 154 RGQLRAGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTA-ATEFVKSVGADIVLPLE 212

Query: 235 TNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGM--GHHEMT 292
              +  A+ V +     G G+D+  D  G       A+    + G++ +VG   G    T
Sbjct: 213 ---EGWAKAVREATG--GAGVDMVVDPIG-GPAFDDAVRTLASEGRLLVVGFAAGGIP-T 265

Query: 293 VPLTPAAVREVDVVGVF----------RYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQK 342
           + +    +R   ++GV               T     +L+  G   ++P V+ R   S  
Sbjct: 266 IKVNRLLLRNASLIGVAWGEFLRTHADYLYETQAGLEKLVAEG---MRPPVSARIPLS-- 320

Query: 343 EVEEAFETSARGGTAIKVM 361
           E  +A +  A G    K++
Sbjct: 321 EGRQALQDFADGKVYGKMV 339

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti} Length = 349

 Score =  114 bits (287), Expect = 4e-29
 Identities = 63/369 (17%), Positives = 112/369 (30%), Gaps = 67/369 (18%)

Query: 15  EEVNMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDV-----HYLKTLRCADF 69
           +  + +A       L+     +P+ GP  VL+++    I  SDV      Y         
Sbjct: 23  KTPSGSALEAMEPYLEQGRIAVPAPGPSQVLIKVNLASINPSDVAFIKGQY-------GQ 75

Query: 70  VVKEPMVIGHECAGVIEKVGSEVKT-LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKF 128
              +    G E  G I   G E     + G RVA   G+S                    
Sbjct: 76  PRVKGRPAGFEGVGTIVAGGDEPYAKSLVGKRVAFATGLS-------------------- 115

Query: 129 FATPPVHGSLANQVVHPADLCFKLPDNVSLEEGA--MCEPLSVGLHACRRANIGPETNVL 186
                  GS A   V  A  C  L D V  E+GA  +  PL+  +          E   +
Sbjct: 116 -----NWGSWAEYAVAEAAACIPLLDTVRDEDGAAMIVNPLTA-IAMFDIVKQEGEKAFV 169

Query: 187 IMGA-GPIGL-VTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEV 244
           +      +   +  L A+  G   IV V  D+ ++++ K++GA +++       D    +
Sbjct: 170 MTAGASQLCKLIIGL-AKEEGFRPIVTVRRDE-QIALLKDIGAAHVLNEKA--PDFEATL 225

Query: 245 EKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGM--GHHEMTVPLTPAAVRE 302
            ++ K       +  D        S   +A     +  + G       +         + 
Sbjct: 226 REVMK--AEQPRIFLDAVT-GPLASAIFNAMPKRARWIIYGRLDPDATVIREPGQLIFQH 282

Query: 303 VDVVGVF--RYKNTWPLCL--------ELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSA 352
             + G +   +   +            +    G+      VT     ++       E + 
Sbjct: 283 KHIEGFWLSEWMRQFKERRGPAILEAQKRFSDGRW--STDVTAVVPLAEAIAWVPAELTK 340

Query: 353 RGGTAIKVM 361
             G   KV 
Sbjct: 341 PNG---KVF 346

>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A* Length = 371

 Score =  113 bits (284), Expect = 1e-28
 Identities = 66/381 (17%), Positives = 113/381 (29%), Gaps = 86/381 (22%)

Query: 18  NMAAWLLGV--NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPM 75
              A  +              P L    V VR++AV I  SD                  
Sbjct: 11  QQTALTVNDHDEVTVWNAAPCPMLPRDQVYVRVEAVAINPSDTSM------RGQFATPWA 64

Query: 76  VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVH 135
            +G + AG +  VGS+V  +  GDRV                               P  
Sbjct: 65  FLGTDYAGTVVAVGSDVTHIQVGDRV----------YGAQNEMCPR----------TPDQ 104

Query: 136 GSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSV-----GLH----------ACRRANIG 180
           G+ +   V    +  K+P  +S E+ A   P  +      +           A +     
Sbjct: 105 GAFSQYTVTRGRVWAKIPKGLSFEQAA-ALPAGISTAGLAMKLLGLPLPSPSADQPPTHS 163

Query: 181 PETNVLIMG-AGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQD 239
               VL+ G +     VTM   R  G   I I     +   +AK  GA+ +        +
Sbjct: 164 KPVYVLVYGGSTATATVTMQMLRLSGY--IPIATCSPHNFDLAKSRGAEEV--FDYRAPN 219

Query: 240 IAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSAT-RAGGKVCLVGMGHHEMTVPLTPA 298
           +    + I+      +  + DC    ++ +   +A  RAGG    +         P   A
Sbjct: 220 L---AQTIRTYTKNNLRYALDCITNVESTTFCFAAIGRAGGHYVSL------NPFPEHAA 270

Query: 299 AVREVDVVGVFRY-------------------------KNTWPLCLELLRSGKIDVKPLV 333
             + V                                 ++ W +  +L+  G++   PL 
Sbjct: 271 TRKMVTTDWTLGPTIFGEGSTWPAPYGRPGSEEERQFGEDLWRIAGQLVEDGRLVHHPLR 330

Query: 334 THRFGFSQKEVEEAFETSARG 354
             + GF    +++  E   +G
Sbjct: 331 VVQGGFDH--IKQGMELVRKG 349

>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis} Length = 315

 Score =  110 bits (277), Expect = 7e-28
 Identities = 67/361 (18%), Positives = 127/361 (35%), Gaps = 73/361 (20%)

Query: 21  AWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHE 80
           A+    +++ +   ++P+L   D+LV+ +A+GI   D    K ++          V G +
Sbjct: 9   AYQTKTHSVTLNSVDIPALAADDILVQNQAIGINPVDW---KFIKANPINWSNGHVPGVD 65

Query: 81  CAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVH-GSLA 139
            AGVI KVG++V + + G RV                           + T     GS A
Sbjct: 66  GAGVIVKVGAKVDSKMLGRRV--------------------------AYHTSLKRHGSFA 99

Query: 140 NQVVHPADLCFKLPDNVSLEEGAMCEPLSVGL---HACRRANIGPETNVLIMGAGPIGLV 196
              V   D    LPDN+S E  A   P    L    A  +  +  +  VLI+G G +  +
Sbjct: 100 EFTVLNTDRVMTLPDNLSFERAA-ALPC-PLLTAWQAFEKIPLTKQREVLIVGFGAVNNL 157

Query: 197 TMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGID 256
                   G   +V +       ++A + G  ++       ++ ++  +           
Sbjct: 158 LTQMLNNAGY--VVDLVSASLSQALAAKRGVRHLY------REPSQVTQ--------KYF 201

Query: 257 VSFDCAGFNKTMSTALSATRAGGKVCLV--------------GMGHHEMTVPLTPAAVRE 302
             FD    ++  +  + + +A G +  +               + +HE+ +         
Sbjct: 202 AIFDAVN-SQNAAALVPSLKANGHIICIQDRIPAPIDPAFTRTISYHEIALGALHDFGDR 260

Query: 303 VDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMF 362
            D   + +        L L+  GK+  +      F F Q  + EA + S +      +  
Sbjct: 261 QDWQILMQQGEA---LLTLIAQGKM--EIAAPDIFRFEQ--MIEALDHSEQTKLKTVLTL 313

Query: 363 N 363
           N
Sbjct: 314 N 314

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1 Length = 327

 Score =  109 bits (274), Expect = 2e-27
 Identities = 63/268 (23%), Positives = 99/268 (36%), Gaps = 45/268 (16%)

Query: 25  GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKE-PMVIGHECAG 83
           G   L+   F        ++ V  KA+GI   D +     R   +     P  +G E AG
Sbjct: 12  GPEVLQAVEFTPADPAENEIQVENKAIGINFIDTYI----RSGLYPPPSLPSGLGTEAAG 67

Query: 84  VIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVV 143
           ++ KVGS VK +  GDRV                           +A   + G+ ++   
Sbjct: 68  IVSKVGSGVKHIKAGDRVV--------------------------YAQSAL-GAYSSVHN 100

Query: 144 HPADLCFKLPDNVSLEEGAMCEPLSVGLHA----CRRANIGPETNVLIMG-AGPIGLVTM 198
             AD    LP  +S E+ A       GL       +   I P+   L    AG +GL+  
Sbjct: 101 IIADKAAILPAAISFEQAAAS--FLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIAC 158

Query: 199 LGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVS 258
             A+A GA  I  V     +   A + GA  ++      +D+ E +++I    G  + V 
Sbjct: 159 QWAKALGAKLIGTVGTAQ-KAQSALKAGAWQVINYRE--EDLVERLKEITG--GKKVRVV 213

Query: 259 FDCAGFNKTMSTALSATRAGGKVCLVGM 286
           +D  G   T   +L   +  G +   G 
Sbjct: 214 YDSVG-RDTWERSLDCLQRRGLMVSFGN 240

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A* Length = 325

 Score =  108 bits (273), Expect = 3e-27
 Identities = 75/273 (27%), Positives = 108/273 (39%), Gaps = 55/273 (20%)

Query: 25  GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHY------LKTLRCADFVVKEPMVIG 78
           G   L+   FE  + GP  V+VR KA+G+   D +Y         L         P  +G
Sbjct: 12  GPEVLEYVDFEPEAPGPQAVVVRNKAIGLNFIDTYYRSGLYPAPFL---------PSGLG 62

Query: 79  HECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSL 138
            E AGV+E VG EV     GDRVA                          + T P+ G+ 
Sbjct: 63  AEGAGVVEAVGDEVTRFKVGDRVA--------------------------YGTGPL-GAY 95

Query: 139 ANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHAC----RRANIGPETNVLIMG-AGPI 193
           +   V P     KL D+VS E+ A    +  GL       +   + P   +L    AG +
Sbjct: 96  SEVHVLPEANLVKLADSVSFEQAAAL--MLKGLTVQYLLRQTYQVKPGEIILFHAAAGGV 153

Query: 194 GLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGT 253
           G +    A+A GA  I  V   + + + AK LGA   +  S   +D+A+ V ++    G 
Sbjct: 154 GSLACQWAKALGAKLIGTVSSPE-KAAHAKALGAWETIDYSH--EDVAKRVLELTD--GK 208

Query: 254 GIDVSFDCAGFNKTMSTALSATRAGGKVCLVGM 286
              V +D  G   T  T+L +    G V   G 
Sbjct: 209 KCPVVYDGVG-QDTWLTSLDSVAPRGLVVSFGN 240

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 Length = 351

 Score =  109 bits (274), Expect = 3e-27
 Identities = 70/346 (20%), Positives = 121/346 (34%), Gaps = 74/346 (21%)

Query: 35  ELPSLGPYDVLVRMKAVGICGSDV-----HYLKTLRCADFVVKEPMVIGHECAGVIEKVG 89
            +P    + VL+++ A G+   +       Y             P   G + AGVIE VG
Sbjct: 51  AVPIPKDHQVLIKVHACGVNPVETYIRSGTY-------SRKPLLPYTPGSDVAGVIEAVG 103

Query: 90  SEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLC 149
                   GDRV                   +              G  A   +      
Sbjct: 104 DNASAFKKGDRVF-----------------TSSTI----------SGGYAEYALAADHTV 136

Query: 150 FKLPDNVSLEEGA-MCEPLSVGLHACR-RANIGPETNVLIMGA-GPIGLVTMLGARAFGA 206
           +KLP+ +  ++GA +  P      A    A +    +VL+ GA G +GL     ARA+G 
Sbjct: 137 YKLPEKLDFKQGAAIGIPYFTAYRALIHSACVKAGESVLVHGASGGVGLAACQIARAYGL 196

Query: 207 PRIVIVDV-DDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFN 265
              ++     +    +  + GA  +        +  ++++K       GID+  +    N
Sbjct: 197 --KILGTAGTEEGQKIVLQNGAHEVFNHRE--VNYIDKIKKYVG--EKGIDIIIEMLA-N 249

Query: 266 KTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAV--REVDVVGVFRYKNT--------- 314
             +S  LS    GG+V +VG      T+ + P     +E  ++GV  + +T         
Sbjct: 250 VNLSKDLSLLSHGGRVIVVGSRG---TIEINPRDTMAKESSIIGVTLFSSTKEEFQQYAA 306

Query: 315 --WPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAI 358
                    +  G +  KP++  ++     +V EA E    G  A 
Sbjct: 307 ALQA----GMEIGWL--KPVIGSQYPLE--KVAEAHENIIHGSGAT 344

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis} Length = 340

 Score =  108 bits (272), Expect = 4e-27
 Identities = 60/345 (17%), Positives = 114/345 (33%), Gaps = 73/345 (21%)

Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDV-----HYLKTLRCADFVVKEPMVIGHECAG 83
           L+++   +  L   +V VRM    I  SD+      Y          +  P + G+E  G
Sbjct: 20  LQVEYKNIEPLKDNEVFVRMLVRPINPSDLIPITGAY-------AHRIPLPNIPGYEGVG 72

Query: 84  VIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVV 143
           ++E VG+ V   + G RV    G                             G+    V 
Sbjct: 73  IVENVGAFVSRELIGKRVLPLRG----------------------------EGTWQEYVK 104

Query: 144 HPADLCFKLPDNVSLEEGA--MCEPLSVGLHACRRANIGPETNVLIMGA-GPIGL-VTML 199
             AD    +PD++     A     PL+  +      N+     +L+      IG     L
Sbjct: 105 TSADFVVPIPDSIDDFTAAQMYINPLTAWVTCTETLNLQRNDVLLVNACGSAIGHLFAQL 164

Query: 200 GARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF 259
            ++      I +   +         LGA  ++  ST    + E V ++    G G D + 
Sbjct: 165 -SQILNFRLIAVTRNNK-HTEELLRLGAAYVIDTST--APLYETVMELTN--GIGADAAI 218

Query: 260 DCAGFNKTMSTALSATRAGGKVCLVGM--GHHEMTVPLTPAAVREVDVVGVFR------- 310
           D  G     +    + R  G    +G+  G   + V       +      +F        
Sbjct: 219 DSIG-GPDGNELAFSLRPNGHFLTIGLLSG---IQVNWAEIVTKAKVHANIFHLRHWNDE 274

Query: 311 -----YKNTWPLCLELLRSGKIDVKPL-VTHRFGFSQKEVEEAFE 349
                ++ T+   + L+ + ++  + + V   +  +  +V+ A +
Sbjct: 275 VSPYKWQETFRHLIRLVENEQL--RFMKVHSTYELA--DVKAAVD 315

>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens} Length = 349

 Score =  107 bits (270), Expect = 1e-26
 Identities = 73/380 (19%), Positives = 118/380 (31%), Gaps = 105/380 (27%)

Query: 19  MAAWLL----GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDV-----HYLKTLRCADF 69
           M A +L    G+N L++    +P     ++ +R+KA G+   D+     +        D 
Sbjct: 4   MRAVVLAGFGGLNKLRLFRKAMPEPQDGELKIRVKACGLNFIDLMVRQGNI-------DN 56

Query: 70  VVKEPMVIGHECAGVIEKVGSEVKTLVPGDRV-ALEPGISCWRCDHCKGGRYNLCPEMKF 128
             K P+V G EC+G++E +G  VK    GDRV A                          
Sbjct: 57  PPKTPLVPGFECSGIVEALGDSVKGYEIGDRVMAFVNY---------------------- 94

Query: 129 FATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVG-----LHACRRANIGPET 183
                   + A  V  P +  +K+PD++S  E A   P++       L     AN+    
Sbjct: 95  -------NAWAEVVCTPVEFVYKIPDDMSFSEAA-AFPMNFVTAYVMLF--EVANLREGM 144

Query: 184 NVLI-MGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAE 242
           +VL+    G +G               V      ++    K+       +      D  +
Sbjct: 145 SVLVHSAGGGVGQAVAQLCSTVPN-VTVFGTASTFKHEAIKDSVTHLFDRN----ADYVQ 199

Query: 243 EVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGM---------------- 286
           EV++I      G+D+  DC          LS  +  G   L G                 
Sbjct: 200 EVKRIS---AEGVDIVLDCLC-GDNTGKGLSLLKPLGTYILYGSSNMVTGETKSFFSFAK 255

Query: 287 -GHHEMTVPLTPAAVREVDVVGVF----------------RYKNTWPLCLELLRSGKIDV 329
                  V           + G                    +        L    KI  
Sbjct: 256 SWWQVEKVNPIKLYEENKVIAGFSLLNLLFKQGRAGLIRGVVEKLIG----LYNQKKI-- 309

Query: 330 KPLVTHRFGFSQKEVEEAFE 349
           KP+V   +     EV+EA +
Sbjct: 310 KPVVDSLWALE--EVKEAMQ 327

>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha} Length = 379

 Score =  105 bits (264), Expect = 8e-26
 Identities = 51/303 (16%), Positives = 95/303 (31%), Gaps = 74/303 (24%)

Query: 6   MSQGEKEDGEEVNMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLK--- 62
           +    K  GE             L +   + P  GP +VL+R++A  +  SD+  L    
Sbjct: 8   LRSRIKSSGELE-----------LSLDSIDTPHPGPDEVLIRIEASPLNPSDLGLLFGAA 56

Query: 63  -----------------------TLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGD 99
                                   +R     +   M +G+E AGV+ + GS         
Sbjct: 57  DMSTAKASGTAERPIVTARVPEGAMRSMAGRLDASMPVGNEGAGVVVEAGSSPAAQALMG 116

Query: 100 RVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLE 159
           +     G + +                            +     PAD C  LP+  +  
Sbjct: 117 KTVAAIGGAMY----------------------------SQYRCIPADQCLVLPEGATPA 148

Query: 160 EGAMC--EPLSVGLHACRRANIGPETNVLIMG-AGPIGLVTMLGARAFGAPRIVIVDVDD 216
           +GA     PL+  L       +   + ++    A  +G +        G   + IV   +
Sbjct: 149 DGASSFVNPLTA-LGMVETMRLEGHSALVHTAAASNLGQMLNQICLKDGIKLVNIVRKQE 207

Query: 217 YRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATR 276
            +  + K  GA ++   +       +++ +    + TG  ++FD  G  K     L+   
Sbjct: 208 -QADLLKAQGAVHV--CNAASPTFMQDLTEA--LVSTGATIAFDATGGGKLGGQILTCME 262

Query: 277 AGG 279
           A  
Sbjct: 263 AAL 265

>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans} Length = 343

 Score =  103 bits (260), Expect = 3e-25
 Identities = 76/342 (22%), Positives = 123/342 (35%), Gaps = 70/342 (20%)

Query: 31  IQPFELPSLGPYDVLVRMKAVGICGSDVH----YLKTLRCADFVVKEPMVIGHECAGVIE 86
           ++    P   P  VLV+++A G    D           +        P ++G + AG + 
Sbjct: 22  LRKLARPQPAPGQVLVQIEASGTNPLDAKIRAGEAPHAQQPL-----PAILGMDLAGTVV 76

Query: 87  KVGSEVKTLVPGDRV-ALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHP 145
            VG EV +   GD V  L  G+                          + G+ A      
Sbjct: 77  AVGPEVDSFRVGDAVFGLTGGV------------------------GGLQGTHAQFAAVD 112

Query: 146 ADLCFKLPDNVSLEEGAMCEPLSVGLHA----CRRANIGPETNVLIM-GAGPIGLVTMLG 200
           A L    P  +++ + +   PL V + A      RA +     VLI  G G +G V +  
Sbjct: 113 ARLLASKPAALTMRQAS-VLPL-VFITAWEGLVDRAQVQDGQTVLIQGGGGGVGHVAIQI 170

Query: 201 ARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD 260
           A A GA   V        L   ++LGA  I       ++  +   +     G G D+ +D
Sbjct: 171 ALARGA--RVFATARGSDLEYVRDLGATPID----ASREPEDYAAEH--TAGQGFDLVYD 222

Query: 261 CAGFNKTMSTALSATRAGGK-VCLVGMGHHEMTVPLTPAAVREVDVVGVF----RYKNTW 315
             G    +  + SA +  G  V  +G G H+    L P + ++    GVF       N  
Sbjct: 223 TLG-GPVLDASFSAVKRFGHVVSCLGWGTHK----LAPLSFKQATYSGVFTLHTLLANEG 277

Query: 316 PL--------CLELLRSGKIDVKPLVTHRFGFSQKEVEEAFE 349
                        L+++GK+   P +  R  FS  E+  A++
Sbjct: 278 LAHFGEMLREADALVQTGKL--APRLDPRT-FSIAEIGSAYD 316

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A* Length = 334

 Score =  102 bits (257), Expect = 5e-25
 Identities = 60/268 (22%), Positives = 106/268 (39%), Gaps = 44/268 (16%)

Query: 25  GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGV 84
           G + +K + + +PS+   ++L++ K  G+   + ++    R   +  ++P V+G E +G 
Sbjct: 19  GYDVIKYEDYPVPSISEEELLIKNKYTGVNYIESYF----RKGIYPCEKPYVLGREASGT 74

Query: 85  IEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVH 144
           +   G  V     GD+VA                          + +       +   + 
Sbjct: 75  VVAKGKGVTNFEVGDQVA--------------------------YISNSTFAQYS--KIS 106

Query: 145 PADLCFKLPDNVSLEEGAMCEPLSV-GLHAC----RRANIGPETNVLIMG-AGPIGLVTM 198
                 KLP   S EE  +     +  L A        ++     VL+   AG +GL+  
Sbjct: 107 SQGPVMKLPKGTSDEELKLYAAGLLQVLTALSFTNEAYHVKKGDYVLLFAAAGGVGLILN 166

Query: 199 LGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVS 258
              +  GA  I +   D+ +L +AKE GA+ ++  S   +DI  +V K     G G+D S
Sbjct: 167 QLLKMKGAHTIAVASTDE-KLKIAKEYGAEYLINASK--EDILRQVLKFTN--GKGVDAS 221

Query: 259 FDCAGFNKTMSTALSATRAGGKVCLVGM 286
           FD  G   T   +L+A +  G     G 
Sbjct: 222 FDSVG-KDTFEISLAALKRKGVFVSFGN 248

>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens} Length = 375

 Score =  102 bits (255), Expect = 2e-24
 Identities = 76/391 (19%), Positives = 131/391 (33%), Gaps = 91/391 (23%)

Query: 19  MAAWLL----GVNTLKI-QPFELPSLG-PYDVLVRMKAVGICGSDVH----YLKTLR--- 65
             AW++        L+  Q   +P +  P +V+V++ A  +   DV+    Y  T     
Sbjct: 22  SMAWVIDKYGKNEVLRFTQNMMMPIIHYPNEVIVKVHAASVNPIDVNMRSGYGATALNMK 81

Query: 66  -----CADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRY 120
                      + P+ +G + +GV+ + G +VK   PGD V                   
Sbjct: 82  RDPLHVKIKGEEFPLTLGRDVSGVVMECGLDVKYFKPGDEV------------------- 122

Query: 121 NLCPEMKFFATPPVH-GSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGL-------- 171
                  + A PP   G+L+  VV   +     P +++  + A   P  V L        
Sbjct: 123 -------WAAVPPWKQGTLSEFVVVSGNEVSHKPKSLTHTQAA-SLPY-VALTAWSAINK 173

Query: 172 HACRRANIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNI 230
                        VLI+GA G +G   +   +A+ A   V          + ++LGAD++
Sbjct: 174 VGGLNDKNCTGKRVLILGASGGVGTFAIQVMKAWDA--HVTAVCSQDASELVRKLGADDV 231

Query: 231 VKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHE 290
           +   +    + E+++          D   D  G   T + A    +       V +    
Sbjct: 232 IDYKS--GSVEEQLKS-----LKPFDFILDNVG-GSTETWAPDFLKKWSGATYVTLVTPF 283

Query: 291 -------------------MTVPLTPAAVREVDVVGVFRYKNTWPL--CLELLRSGKIDV 329
                              +         + V     F   +   L    EL+ +GKI  
Sbjct: 284 LLNMDRLGIADGMLQTGVTVGSKALKHFWKGVHYRWAFFMASGPCLDDIAELVDAGKI-- 341

Query: 330 KPLVTHRFGFSQKEVEEAFETSARGGTAIKV 360
           +P++   F FS  +V EAF    RG    K 
Sbjct: 342 RPVIEQTFPFS--KVPEAFLKVERGHARGKT 370

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli} Length = 353

 Score =  101 bits (254), Expect = 2e-24
 Identities = 82/373 (21%), Positives = 126/373 (33%), Gaps = 79/373 (21%)

Query: 18  NMAAWLL----GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDV-----HYLKTLRCAD 68
            M    L    G + + I    LP  G  +VLVR +A+G+   D+      Y        
Sbjct: 28  EMRFVDLKSFGGPDVMVIGKRPLPVAGEGEVLVRAEAIGVNRPDIAQRQGSY-------P 80

Query: 69  FVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKF 128
                  ++G E +G I  VG  V     GD+V          C    GG Y        
Sbjct: 81  PPKDASPILGLELSGEIVGVGPGVSGYAVGDKV----------CGLANGGAY-------- 122

Query: 129 FATPPVHGSLANQVVHPADLCFKLPDNVSLEEGA-MCEP-LSVGLHACRRANIGPETNVL 186
                     A   + PA      P      + A + E   +V  +  + A +    +VL
Sbjct: 123 ----------AEYCLLPAGQILPFPKGYDAVKAAALPETFFTVWANLFQMAGLTEGESVL 172

Query: 187 IM-GAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVE 245
           I  G   IG   +  ARAFGA           +    + LGA   +   +  +D A  ++
Sbjct: 173 IHGGTSGIGTTAIQLARAFGAEVYATAGSTG-KCEACERLGAKRGINYRS--EDFAAVIK 229

Query: 246 KIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGM--GHHEMTVPLTPAAVREV 303
                 G G+D+  D  G        +++    G + ++    G     V L+P  V+ +
Sbjct: 230 AET---GQGVDIILDMIG-AAYFERNIASLAKDGCLSIIAFLGGAVAEKVNLSPIMVKRL 285

Query: 304 DVVGVF------RYK---------NTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAF 348
            V G          K           WP    LL +G +   P++   F F   +V +A 
Sbjct: 286 TVTGSTMRPRTAEEKRAIRDDLLSEVWP----LLEAGTV--APVIHKVFAFE--DVADAH 337

Query: 349 ETSARGGTAIKVM 361
                G    KVM
Sbjct: 338 RLLEEGSHVGKVM 350

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D Length = 302

 Score = 96.4 bits (241), Expect = 5e-23
 Identities = 77/353 (21%), Positives = 123/353 (34%), Gaps = 86/353 (24%)

Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCAD---FVVKEPMVIGHECAGVI 85
           L++     P     +V++R++AVG+  +D      L         +  P + G E  GV+
Sbjct: 13  LELVDLPEPEAEEGEVVLRVEAVGLNFADH-----LMRLGAYLTRLHPPFIPGMEVVGVV 67

Query: 86  EKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHP 145
           E           G R A                           A  P  G LA +V  P
Sbjct: 68  E-----------GRRYA---------------------------ALVP-QGGLAERVAVP 88

Query: 146 ADLCFKLPDNVSLEEGAMCEPLSVG--LHACRRANIGPETNVLIMG-AGPIGLVTMLGAR 202
                 LP+ +S EE A   P+S      A +RA   P   VL+   AG +G   +  AR
Sbjct: 89  KGALLPLPEGLSPEEAA-AFPVSFLTAYLALKRAQARPGEKVLVQAAAGALGTAAVQVAR 147

Query: 203 AFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCA 262
           A G   +      + +L++   LGA+            AE  E+ +     G+D+  +  
Sbjct: 148 AMGLRVLAAASRPE-KLALPLALGAEEAA-------TYAEVPERAKA--WGGLDLVLEVR 197

Query: 263 GFNKTMSTALSATRAGGKVCLVGM-GHHEMTVPLTPAAVREVDVVGVF-RY--------- 311
           G  K +  +L     GG++  +G        +P      R + V+G +            
Sbjct: 198 G--KEVEESLGLLAHGGRLVYIGAAEGEVAPIPPLRLMRRNLAVLGFWLTPLLREGALVE 255

Query: 312 ---KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVM 361
                  P         ++  +P+V   F F+  E E AF      G   KV+
Sbjct: 256 EALGFLLPRL-----GREL--RPVVGPVFPFA--EAEAAFRALLDRGHTGKVV 299

>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli} Length = 363

 Score = 97.4 bits (243), Expect = 6e-23
 Identities = 63/358 (17%), Positives = 117/358 (32%), Gaps = 65/358 (18%)

Query: 27  NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIE 86
            +L       P+   +D+LV +KAV +   D    K  R       +  VIG++ AG++ 
Sbjct: 38  ASLLDIELPKPAPAGHDILVEVKAVSVNPVDY---KVRRSTPPDGTDWKVIGYDAAGIVS 94

Query: 87  KVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVH-GSLANQVVHP 145
            VG +V    PGD V                          F+A   +  G+ A   +  
Sbjct: 95  AVGPDVTLFRPGDEV--------------------------FYAGSIIRPGTNAEFHLVD 128

Query: 146 ADLCFKLPDNVSLEEGAMCEPLSVGLHA----CRRANIGPETN-----VLIM-GAGPIGL 195
             +  + P  +   E A   PL   + A      R ++          +LI+ GAG +G 
Sbjct: 129 ERIVGRKPKTLDWAEAA-ALPL-TSITAWEAFFDRLDVNKPVPGAAPAILIVGGAGGVGS 186

Query: 196 VTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGI 255
           + +  AR      ++            K LGA +++  S   + +A EV  +        
Sbjct: 187 IAVQIARQRTDLTVIATASRPETQEWVKSLGAHHVIDHS---KPLAAEVAALG---LGAP 240

Query: 256 DVSFDCAGFNKTMSTALSATRAGGKVCL-VGMGHHEMTVPLTPAAVREVDVVGVFRYKNT 314
              F     +K  +         G+ CL            +     + V +     +   
Sbjct: 241 AFVFSTTHTDKHAAEIADLIAPQGRFCLIDDPS----AFDIMLFKRKAVSIHHELMFTRP 296

Query: 315 WPLCLELLRSGKI-----------DVKPLVTHRFG-FSQKEVEEAFETSARGGTAIKV 360
                ++   G++            ++  +T+R    +   +++A      G    KV
Sbjct: 297 MFGTPDMSEQGRLLNDVSRLVDEGRLRTTLTNRLSPINAANLKQAHALVESGTARGKV 354

>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus} Length = 346

 Score = 92.3 bits (230), Expect = 3e-21
 Identities = 66/365 (18%), Positives = 125/365 (34%), Gaps = 80/365 (21%)

Query: 27  NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIE 86
           N  K    ++P    +++LV+++++ +   D       R    V K P V+G +  GV+E
Sbjct: 18  NLFKTFNLDIPEPKVHEILVKIQSISVNPVDTK----QR-LMDVSKAPRVLGFDAIGVVE 72

Query: 87  KVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFA-TPPVHGSLANQVVHP 145
            VG+EV     GD V                          +++ +P  +GS A   +  
Sbjct: 73  SVGNEVTMFNQGDIV--------------------------YYSGSPDQNGSNAEYQLIN 106

Query: 146 ADLCFKLPDNVSLEE-GAMCEPLSVGLHA----CRRANIGPETN------VLIM-GAGPI 193
             L  K P N+S E+  ++  PL  G+ A         I    N      +LI+ GAG +
Sbjct: 107 ERLVAKAPKNISAEQAVSL--PL-TGITAYETLFDVFGISRNRNENEGKTLLIINGAGGV 163

Query: 194 GLVTMLGARAFGAPRIVIVDV-DDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMG 252
           G +    A+A+G    VI     +  +   K++GAD ++    +L      + + +    
Sbjct: 164 GSIATQIAKAYGL--RVITTASRNETIEWTKKMGADIVLNHKESL------LNQFKTQGI 215

Query: 253 TGIDVSFDCAGFNKTMSTALSATRAGGKVCL-VGMGHHEMTVPLTPAAVREVDVVGVFRY 311
             +D  F     +      +   +  G +   V   +      L     + +     F +
Sbjct: 216 ELVDYVFCTFNTDMYYDDMIQLVKPRGHIATIVAFEN---DQDLNALKPKSLSFSHEFMF 272

Query: 312 KNTWPLCL---------------ELLRSGKIDVKPLVTHRFG-FSQKEVEEAFETSARGG 355
               PL                   +       +P  T      + + + +A +      
Sbjct: 273 --ARPLNQTDDMIKHHEYLEDITNKVEQNIY--QPTTTKVIEGLTTENIYQAHQILESNT 328

Query: 356 TAIKV 360
              K+
Sbjct: 329 MIGKL 333

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A* Length = 354

 Score = 88.8 bits (221), Expect = 5e-20
 Identities = 65/376 (17%), Positives = 122/376 (32%), Gaps = 80/376 (21%)

Query: 18  NMAAWLL----GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDV-----HYLKTLRCAD 68
           +M A       G   L ++    PS G  +VL+++ A  +  +D+      Y        
Sbjct: 22  SMLAVHFDKPGGPENLYVKEVAKPSPGEGEVLLKVAASALNRADLMQRQGQY-------- 73

Query: 69  FVVK--EPMVIGHECAGVIEKVGSEVKT-LVPGDRVALEPGISCWRCDHCKGGRYNLCPE 125
                    ++G E +G + ++G   +     GD                 GG       
Sbjct: 74  -DPPPGASNILGLEASGHVAELGPGCQGHWKIGDTA----------MALLPGGGQ----- 117

Query: 126 MKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGA-MCEP-LSVGLHACRRANIGPET 183
                        A  V  P  L   +P+ ++L + A + E  L+         N+    
Sbjct: 118 -------------AQYVTVPEGLLMPIPEGLTLTQAAAIPEAWLTAFQLLHLVGNVQAGD 164

Query: 184 NVLIM-GAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAE 242
            VLI  G   +G   +   R  GA  +V       +L +A++LGA          +D +E
Sbjct: 165 YVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQK-KLQMAEKLGAAAGFNYKK--EDFSE 221

Query: 243 EVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGM--GHHEMTVPLTPAAV 300
              K  K  G G+++  DC G        ++     G+  L G+  G        +    
Sbjct: 222 ATLKFTK--GAGVNLILDCIG-GSYWEKNVNCLALDGRWVLYGLMGGGDINGPLFSKLLF 278

Query: 301 REVDVVGVF------RYK---------NTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVE 345
           +   ++         +YK            P         ++   P++   +  +  E++
Sbjct: 279 KRGSLITSLLRSRDNKYKQMLVNAFTEQILPH-FSTEGPQRL--LPVLDRIYPVT--EIQ 333

Query: 346 EAFETSARGGTAIKVM 361
           EA +         K++
Sbjct: 334 EAHKYMEANKNIGKIV 349

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa} Length = 795

 Score = 83.2 bits (206), Expect = 1e-17
 Identities = 64/335 (19%), Positives = 109/335 (32%), Gaps = 62/335 (18%)

Query: 32  QPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSE 91
           +P     LG  +V + M+A G+   D   L  L     +      +G E AGV+ + G  
Sbjct: 229 EPTATAPLGDGEVRIAMRAAGVNFRDA--LIALG----MYPGVASLGSEGAGVVVETGPG 282

Query: 92  VKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFK 151
           V  L PGDRV                                +  +     V    +  +
Sbjct: 283 VTGLAPGDRVMG-----------------------------MIPKAFGPLAVADHRMVTR 313

Query: 152 LPDNVSLEEGAMCEPLSVG--LHA-CRRANIGPETNVLI-MGAGPIGLVTMLGARAFGAP 207
           +P   S    A   P+      +A    A + P  ++L+   AG +G+  +  AR  GA 
Sbjct: 314 IPAGWSFARAA-SVPIVFLTAYYALVDLAGLRPGESLLVHSAAGGVGMAAIQLARHLGAE 372

Query: 208 RIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKT 267
                  D ++   A EL  +++   S    D  ++        G G+DV  +     + 
Sbjct: 373 VYATASEDKWQ---AVELSREHLA-SSRTC-DFEQQFLGATG--GRGVDVVLNSLA-GEF 424

Query: 268 MSTALSATRAGGKVCLVGMG------HHEMTVPLTPAAVREVDVVGVF--RYKNTWPLCL 319
              +L     GG    + +G        E+       + +  D V     R        +
Sbjct: 425 ADASLRMLPRGG--RFLELGKTDVRDPVEVADAHPGVSYQAFDTVEAGPQRIGEMLHELV 482

Query: 320 ELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARG 354
           EL     +  +PL    +   Q    EA    ++ 
Sbjct: 483 ELFEGRVL--EPLPVTAWDVRQ--APEALRHLSQA 513

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A* Length = 362

 Score = 81.5 bits (202), Expect = 2e-17
 Identities = 64/356 (17%), Positives = 112/356 (31%), Gaps = 74/356 (20%)

Query: 35  ELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT 94
            +P  G  D+LVR + VG+  SD++Y       D  VK P  IG E  G +  +G     
Sbjct: 47  PVPLPGDGDLLVRNRFVGVNASDINYSAGR--YDPSVKPPFDIGFEGIGEVVALGLSASA 104

Query: 95  -LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLP 153
               G  VA                                 GS A   V PA +   +P
Sbjct: 105 RYTVGQAVAYMAP-----------------------------GSFAEYTVVPASIATPVP 135

Query: 154 DNVSLEEGAMCEPL---SVGLHACRRANIGP-ETNVLIMGA-GPIG-LVTMLGARAFGAP 207
                E   +        + L       +   +  VL+  A G  G     L ++     
Sbjct: 136 SVKP-EYLTLLVSGTTAYISLK--ELGGLSEGKK-VLVTAAAGGTGQFAMQL-SKKAKCH 190

Query: 208 RIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKT 267
            I     D+ + +  K LG D  +   T  + +   ++   +    G+DV ++  G    
Sbjct: 191 VIGTCSSDE-KSAFLKSLGCDRPINYKT--EPVGTVLK---QEYPEGVDVVYESVG-GAM 243

Query: 268 MSTALSATRAGGKVCLVGM-GHHEMTVPLTPAA---------VREVDVVG--VFRYKNTW 315
              A+ A    G++ ++G    ++    L+P            +   V G  +  Y + +
Sbjct: 244 FDLAVDALATKGRLIVIGFISGYQTPTGLSPVKAGTLPAKLLKKSASVQGFFLNHYLSKY 303

Query: 316 PLCLE----LLRSGKIDVK------PLVTHRFGFSQKEVEEAFETSARGGTAIKVM 361
              +     +  SG +  +             G     +  A      G    K++
Sbjct: 304 QAAMSHLLEMCVSGDLVCEVDLGDLSPEGRFTGLES--IFRAVNYMYMGKNTGKIV 357

>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A* Length = 330

 Score = 51.5 bits (124), Expect = 1e-07
 Identities = 58/294 (19%), Positives = 110/294 (37%), Gaps = 53/294 (18%)

Query: 28  TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADF--VVKE-PMVIGHECAGV 84
           ++ ++      L    VL+++       S ++Y   L       +V+E P+++G + AG 
Sbjct: 18  SVHVKTISTEDLPKDGVLIKVAY-----SGINYKDGLAGKAGGNIVREYPLILGIDAAGT 72

Query: 85  IEKVGSEVKTLVPGDRVALEPGISCWR--CDHCKGGRYNLCPEMKFFATPPVHGSLANQV 142
           +    S       GD V      + +                           G L+   
Sbjct: 73  VVS--SNDPRFAEGDEVIA----TSYELGVSR--------------------DGGLSEYA 106

Query: 143 VHPADLCFKLPDNVSLEE----GAMCEPLSVGLHACRRANIGPE-TNVLIMGA-GPIGLV 196
             P D    LP N+SL+E    G      ++ +H   +  + PE  +VL+ GA G +G +
Sbjct: 107 SVPGDWLVPLPQNLSLKEAMVYGTAGFTAALSVHRLEQNGLSPEKGSVLVTGATGGVGGI 166

Query: 197 TMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGI- 255
            +      G   +     +       K+LGA  ++          +  +   KA+     
Sbjct: 167 AVSMLNKRGYDVVAST-GNREAADYLKQLGASEVI-------SREDVYDGTLKALSKQQW 218

Query: 256 DVSFDCAGFNKTMSTALSATRAGGKVCLVGM-GHHEMTVPLTPAAVREVDVVGV 308
             + D  G  K +++ LS  + GG V + G+ G  E+   + P  +R V ++G+
Sbjct: 219 QGAVDPVG-GKQLASLLSKIQYGGSVAVSGLTGGGEVPATVYPFILRGVSLLGI 271

>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 Length = 328

 Score = 50.4 bits (121), Expect = 3e-07
 Identities = 58/295 (19%), Positives = 104/295 (35%), Gaps = 55/295 (18%)

Query: 28  TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADF--VVKE-PMVIGHECAGV 84
           T  +Q   +  L   DVLVR+       S V+Y   L       +VK  P V G + AGV
Sbjct: 17  TAGVQTISMDDLPEGDVLVRVHY-----SSVNYKDGLASIPDGKIVKTYPFVPGIDLAGV 71

Query: 85  IEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVH 144
           +    S+      GD V      + +      G  +               G  +     
Sbjct: 72  VVS--SQHPRFREGDEVIA----TGYEI----GVTH--------------FGGYSEYARL 107

Query: 145 PADLCFKLPDNVSLEE----GAMCEPLSVGLHACRRANIGPETNVLIMGAGP--IGLVTM 198
             +    LP  ++L+E    G      ++ +H      + PE   +++      +G + +
Sbjct: 108 HGEWLVPLPKGLTLKEAMAIGTAGFTAALSIHRLEEHGLTPERGPVLVTGATGGVGSLAV 167

Query: 199 LGARAFGAPRIVIV---DVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGI 255
                 G             DY     + LGA  ++          + + +  + +    
Sbjct: 168 SMLAKRGYTVEASTGKAAEHDY----LRVLGAKEVL-------AREDVMAERIRPLDKQR 216

Query: 256 -DVSFDCAGFNKTMSTALSATRAGGKVCLVGM-GHHEMTVPLTPAAVREVDVVGV 308
              + D  G  +T++T LS  R GG V + G+ G  E+   + P  +R V ++G+
Sbjct: 217 WAAAVDPVG-GRTLATVLSRMRYGGAVAVSGLTGGAEVPTTVHPFILRGVSLLGI 270

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* Length = 2512

 Score = 50.3 bits (120), Expect = 7e-07
 Identities = 59/352 (16%), Positives = 101/352 (28%), Gaps = 78/352 (22%)

Query: 35   ELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT 94
                    D L  +    +   DV  +         +    + G                
Sbjct: 1553 YALPASCQDRLCSVYYTSLNFRDV--MLATG----KLSPDSIPGKWLTRDCMLGMEFSGR 1606

Query: 95   LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPD 154
               G RV                        M           LA  V+      +++P 
Sbjct: 1607 DASGRRV------------------------MGMVPA----EGLATSVLLLQHATWEVPS 1638

Query: 155  NVSLEEGAMCEPLSV---------GLHACRRANIGPETNVLI-MGAGPIGLVTMLGARAF 204
              +LEE A     SV          L    R  + P  +VLI  G+G +G   +  A + 
Sbjct: 1639 TWTLEEAA-----SVPIVYTTAYYSLV--VRGRMQPGESVLIHSGSGGVGQAAIAIALSR 1691

Query: 205  GAPRIVIVDVD---DYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDC 261
            G      V       Y  +   +L          N +D + E   ++   G G+D+  + 
Sbjct: 1692 GCRVFTTVGSAEKRAYLQARFPQLDETCFA----NSRDTSFEQHVLRHTAGKGVDLVLNS 1747

Query: 262  AGFNKTMSTALSATRAGGKVCLVGMG--------HHEMTVPLTPAAVREVDVVGVF---- 309
                + +  ++      G    + +G           M V L       + +  +F    
Sbjct: 1748 LA-EEKLQASVRCLAQHG--RFLEIGKFDLSNNHALGMAVFLKNVTFHGILLDSLFEEGG 1804

Query: 310  -RYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKV 360
              ++    L    ++ G   V+PL    F  +  +VE AF   A+G    KV
Sbjct: 1805 ATWQEVSELLKAGIQEGV--VQPLKCTVFPRT--KVEAAFRYMAQGKHIGKV 1852

>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A* Length = 324

 Score = 43.9 bits (104), Expect = 4e-05
 Identities = 60/305 (19%), Positives = 102/305 (33%), Gaps = 55/305 (18%)

Query: 19  MAAWLL----GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADF--VVK 72
           M A +L    G     +Q  E   L   DV V +       S ++Y   L       +++
Sbjct: 1   MQALILEQQDGKTLASVQHLEESQLPAGDVTVDVHW-----SSLNYKDALAITGKGKIIR 55

Query: 73  E-PMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFAT 131
             PM+ G + AG +    SE      G  V L    + W      G  +           
Sbjct: 56  HFPMIPGIDFAGTVHA--SEDPRFHAGQEVLL----TGWGV----GENH----------- 94

Query: 132 PPVHGSLANQVVHPADLCFKLPDNVSLEE----GAMCEPLSVGLHACRRANIGPETNVLI 187
               G LA +     D    LP  +S       G       + + A   A I P+   ++
Sbjct: 95  ---WGGLAERARVKGDWLVALPAGLSSRNAMIIGTAGFTAMLCVMALEDAGIRPQDGEVV 151

Query: 188 MGAGP--IGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVE 245
           +      +G   +      G     +   +       K LGA+ I+    +  + AE   
Sbjct: 152 VTGASGGVGSTAVALLHKLGYQVAAVSGRESTH-GYLKSLGANRIL----SRDEFAES-- 204

Query: 246 KIQKAMGTGI-DVSFDCAGFNKTMSTALSATRAGGKVCLVGM-GHHEMTVPLTPAAVREV 303
              + +   +   + D  G +K ++  L+    GG V   G+ G   +   + P  +R V
Sbjct: 205 ---RPLEKQLWAGAIDTVG-DKVLAKVLAQMNYGGCVAACGLAGGFALPTTVMPFILRNV 260

Query: 304 DVVGV 308
            + GV
Sbjct: 261 RLQGV 265

>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A* Length = 298

 Score = 40.2 bits (93), Expect = 6e-04
 Identities = 10/58 (17%), Positives = 27/58 (46%), Gaps = 5/58 (8%)

Query: 177 ANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKEL----GADNI 230
                    + +G GP+ L  +L +  +G  R+ +V+++     +++++    G D +
Sbjct: 118 GRFRRGERAVFIGGGPLPLTGILLSHVYGM-RVNVVEIEPDIAELSRKVIEGLGVDGV 174

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	364
3m6i_A	363	L-arabinitol 4-dehydrogenase; medium chain dehydro	100.0
1pl8_A	356	Human sorbitol dehydrogenase; NAD, oxidoreductase;	100.0
1e3j_A	352	NADP(H)-dependent ketose reductase; oxidoreductase	100.0
4ej6_A	370	Putative zinc-binding dehydrogenase; structural ge	100.0
4a2c_A	346	Galactitol-1-phosphate 5-dehydrogenase; oxidoreduc	100.0
2d8a_A	348	PH0655, probable L-threonine 3-dehydrogenase; pyro	100.0
3uko_A	378	Alcohol dehydrogenase class-3; alcohol dehydrogena	100.0
1p0f_A	373	NADP-dependent alcohol dehydrogenase; ADH topology	100.0
2dq4_A	343	L-threonine 3-dehydrogenase; NAD-dependent, oxidor	100.0
1e3i_A	376	Alcohol dehydrogenase, class II; HET: NAD; 2.08A {	100.0
3s2e_A	340	Zinc-containing alcohol dehydrogenase superfamily;	100.0
1h2b_A	359	Alcohol dehydrogenase; oxidoreductase, archaea, hy	100.0
1cdo_A	374	Alcohol dehydrogenase; oxidoreductase, oxidoreduct	100.0
2jhf_A	374	Alcohol dehydrogenase E chain; oxidoreductase, met	100.0
3jv7_A	345	ADH-A; dehydrogenase, nucleotide binding, rossmann	100.0
1f8f_A	371	Benzyl alcohol dehydrogenase; rossmann fold, oxido	100.0
3fpc_A	352	NADP-dependent alcohol dehydrogenase; oxydoreducta	100.0
1vj0_A	380	Alcohol dehydrogenase, zinc-containing; TM0436, st	100.0
2fzw_A	373	Alcohol dehydrogenase class III CHI chain; S-nitro	100.0
4eez_A	348	Alcohol dehydrogenase 1; site-saturation mutagenes	100.0
1rjw_A	339	ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD	100.0
3two_A	348	Mannitol dehydrogenase; cinnamyl-alcohol dehydroge	100.0
3uog_A	363	Alcohol dehydrogenase; structural genomics, protei	100.0
2h6e_A	344	ADH-4, D-arabinose 1-dehydrogenase; rossman fold,	100.0
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	100.0
1piw_A	360	Hypothetical zinc-type alcohol dehydrogenase- like	100.0
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	100.0
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	100.0
2dph_A	398	Formaldehyde dismutase; dismutation of aldehydes,	100.0
3ip1_A	404	Alcohol dehydrogenase, zinc-containing; structural	100.0
2b5w_A	357	Glucose dehydrogenase; nucleotide binding motif, o	100.0
1kol_A	398	Formaldehyde dehydrogenase; oxidoreductase; HET: N	100.0
1uuf_A	369	YAHK, zinc-type alcohol dehydrogenase-like protein	100.0
2cf5_A	357	Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign	100.0
3krt_A	456	Crotonyl COA reductase; structural genomics, prote	100.0
1yqd_A	366	Sinapyl alcohol dehydrogenase; lignin, monolignol,	100.0
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	100.0
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	100.0
4eye_A	342	Probable oxidoreductase; structural genomics, niai	100.0
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	100.0
2cdc_A	366	Glucose dehydrogenase glucose 1-dehydrogenase, DHG	100.0
3gqv_A	371	Enoyl reductase; medium-chain reductase (MDR super	100.0
3fbg_A	346	Putative arginate lyase; structural genomics, unkn	100.0
4dvj_A	363	Putative zinc-dependent alcohol dehydrogenase Pro;	100.0
3tqh_A	321	Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella	100.0
3gaz_A	343	Alcohol dehydrogenase superfamily protein; oxidore	100.0
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	100.0
3gms_A	340	Putative NADPH:quinone reductase; structural genom	100.0
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	100.0
3goh_A	315	Alcohol dehydrogenase, zinc-containing; NP_718042.	100.0
4a27_A	349	Synaptic vesicle membrane protein VAT-1 homolog-L;	100.0
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	100.0
1zsy_A	357	Mitochondrial 2-enoyl thioester reductase; medium-	100.0
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	100.0
1gu7_A	364	Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s	100.0
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	100.0
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	100.0
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	100.0
4b7c_A	336	Probable oxidoreductase; NADP cofactor, rossmann f	100.0
3nx4_A	324	Putative oxidoreductase; csgid, structural genomic	100.0
2vn8_A	375	Reticulon-4-interacting protein 1; mitochondrion,	100.0
1tt7_A	330	YHFP; alcohol dehydrogenase, Zn-dependent, NAD, st	100.0
3iup_A	379	Putative NADPH:quinone oxidoreductase; YP_296108.1	100.0
1xa0_A	328	Putative NADPH dependent oxidoreductases; structur	100.0
2zb4_A	357	Prostaglandin reductase 2; rossmann fold, alternat	100.0
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	100.0
2j3h_A	345	NADP-dependent oxidoreductase P1; double bond redu	100.0
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	100.0
1v3u_A	333	Leukotriene B4 12- hydroxydehydrogenase/prostaglan	100.0
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	100.0
1pqw_A	198	Polyketide synthase; rossmann fold, dimer, structu	99.84
2yvl_A	248	TRMI protein, hypothetical protein; tRNA, methyltr	99.07
1gpj_A	404	Glutamyl-tRNA reductase; tRNA-dependent tetrapyrro	98.93
1pjc_A	361	Protein (L-alanine dehydrogenase); oxidoreductase,	98.83
1l7d_A	384	Nicotinamide nucleotide transhydrogenase, subunit	98.57
2eez_A	369	Alanine dehydrogenase; TTHA0216, structural genomi	98.57
1x13_A	401	NAD(P) transhydrogenase subunit alpha; NAD(H)-bind	98.53
2vhw_A	377	Alanine dehydrogenase; NAD, secreted, oxidoreducta	98.52
3ce6_A	494	Adenosylhomocysteinase; protein-substrate complex,	98.39
4dio_A	405	NAD(P) transhydrogenase subunit alpha PART 1; stru	98.16
1o54_A	277	SAM-dependent O-methyltransferase; TM0748, structu	98.12
3p2y_A	381	Alanine dehydrogenase/pyridine nucleotide transhy;	98.06
3oj0_A	144	Glutr, glutamyl-tRNA reductase; structural genomic	98.01
3fpf_A	298	Mtnas, putative uncharacterized protein; thermonic	97.98
1i9g_A	280	Hypothetical protein RV2118C; mtase, adoMet, cryst	97.85
1p91_A	269	Ribosomal RNA large subunit methyltransferase A; R	97.83
3ic5_A	118	Putative saccharopine dehydrogenase; structural ge	97.81
3gvp_A	435	Adenosylhomocysteinase 3; protein CO-factor comple	97.74
3d4o_A	293	Dipicolinate synthase subunit A; NP_243269.1, stru	97.7
2b25_A	336	Hypothetical protein; structural genomics, methyl	97.63
2g1u_A	155	Hypothetical protein TM1088A; structural genomics,	97.62
2rir_A	300	Dipicolinate synthase, A chain; structural genomic	97.5
3n58_A	464	Adenosylhomocysteinase; ssgcid, hydrolase, structu	97.33
3ond_A	488	Adenosylhomocysteinase; plant protein, enzyme-subs	97.31
3e05_A	204	Precorrin-6Y C5,15-methyltransferase (decarboxyla;	97.31
3c85_A	183	Putative glutathione-regulated potassium-efflux S	97.3
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	97.29
3njr_A	204	Precorrin-6Y methylase; methyltransferase, decarbo	97.27
3fwz_A	140	Inner membrane protein YBAL; TRKA-N domain, E.coli	97.26
3grz_A	205	L11 mtase, ribosomal protein L11 methyltransferase	97.18
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	97.16
3hm2_A	178	Precorrin-6Y C5,15-methyltransferase; alpha-beta-s	97.14
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	97.12
1jg1_A	235	PIMT;, protein-L-isoaspartate O-methyltransferase;	97.1
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	97.07
2pwy_A	258	TRNA (adenine-N(1)-)-methyltransferase; mtase, ado	96.98
3lbf_A	210	Protein-L-isoaspartate O-methyltransferase; modifi	96.95
2nyu_A	196	Putative ribosomal RNA methyltransferase 2; SAM, s	96.95
3h9u_A	436	Adenosylhomocysteinase; NAD CO-factor complex, str	96.95
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	96.94
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	96.93
3llv_A	141	Exopolyphosphatase-related protein; NAD(P)-binding	96.91
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	96.87
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	96.87
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	96.86
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	96.84
2yxe_A	215	Protein-L-isoaspartate O-methyltransferase; rossma	96.82
4fs3_A	256	Enoyl-[acyl-carrier-protein] reductase [NADPH] FA;	96.8
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	96.79
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	96.77
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	96.77
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	96.75
3mb5_A	255	SAM-dependent methyltransferase; RNA methyltransfe	96.73
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	96.73
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	96.69
2hnk_A	239	SAM-dependent O-methyltransferase; modified rossma	96.68
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	96.67
2fk8_A	318	Methoxy mycolic acid synthase 4; S-adenosylmethion	96.65
3ged_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	96.64
2gpy_A	233	O-methyltransferase; structural genomics, PSI, pro	96.64
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	96.63
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	96.62
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	96.6
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	96.6
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	96.6
2hmt_A	144	YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane	96.6
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	96.6
4df3_A	233	Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase;	96.59
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	96.59
3hem_A	302	Cyclopropane-fatty-acyl-phospholipid synthase 2; p	96.59
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	96.59
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	96.58
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	96.58
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	96.57
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	96.55
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	96.54
2pbf_A	227	Protein-L-isoaspartate O-methyltransferase beta-A	96.54
3mti_A	185	RRNA methylase; SAM-dependent, PSI, MCSG, structur	96.53
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	96.53
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	96.51
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	96.51
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	96.51
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	96.5
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	96.5
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	96.5
4b79_A	242	PA4098, probable short-chain dehydrogenase; oxidor	96.49
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	96.48
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	96.48
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	96.48
1vl6_A	388	Malate oxidoreductase; TM0542, NAD-dependent malic	96.47
3m4x_A	456	NOL1/NOP2/SUN family protein; mtase domain, PUA do	96.46
3ujc_A	266	Phosphoethanolamine N-methyltransferase; parasite;	96.46
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	96.46
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	96.44
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	96.44
3imf_A	257	Short chain dehydrogenase; structural genomics, in	96.43
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	96.42
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	96.42
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	96.41
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	96.39
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	96.39
4dqx_A	277	Probable oxidoreductase protein; structural genomi	96.39
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	96.39
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	96.38
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	96.38
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	96.37
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	96.37
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	96.36
1ixk_A	315	Methyltransferase; open beta sheet; 1.90A {Pyrococ	96.36
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	96.36
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	96.36
1dl5_A	317	Protein-L-isoaspartate O-methyltransferase; isoasp	96.34
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	96.33
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	96.33
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	96.32
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	96.32
1jw9_B	249	Molybdopterin biosynthesis MOEB protein; MOEB: mod	96.32
3rih_A	293	Short chain dehydrogenase or reductase; structural	96.32
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	96.32
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	96.31
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	96.31
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	96.31
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	96.3
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	96.3
4gkb_A	258	3-oxoacyl-[acyl-carrier protein] reductase; putati	96.3
3orh_A	236	Guanidinoacetate N-methyltransferase; structura ge	96.29
1xq1_A	266	Putative tropinone reducatse; structural genomics,	96.28
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	96.27
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	96.27
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	96.27
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	96.26
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	96.26
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	96.26
1r18_A	227	Protein-L-isoaspartate(D-aspartate)-O-methyltrans;	96.26
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	96.26
3eey_A	197	Putative rRNA methylase; rRNA methylation, S-adeno	96.25
1xkq_A	280	Short-chain reductase family member (5D234); parra	96.25
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	96.24
3cxt_A	291	Dehydrogenase with different specificities; rossma	96.24
1c1d_A	355	L-phenylalanine dehydrogenase; amino acid dehydrog	96.24
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	96.23
1lss_A	140	TRK system potassium uptake protein TRKA homolog;	96.23
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	96.22
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	96.21
4ibo_A	271	Gluconate dehydrogenase; enzyme function initiativ	96.21
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	96.21
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	96.2
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	96.2
3cea_A	346	MYO-inositol 2-dehydrogenase; NP_786804.1, oxidore	96.2
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	96.19
3tfw_A	248	Putative O-methyltransferase; PSI-biology, nysgrc,	96.19
3dfz_A	223	SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase	96.19
2nxc_A	254	L11 mtase, ribosomal protein L11 methyltransferase	96.19
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	96.19
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	96.19
1xhl_A	297	Short-chain dehydrogenase/reductase family member	96.17
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	96.17
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	96.17
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	96.17
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	96.17
1fbn_A	230	MJ fibrillarin homologue; MJ proteins, ribosomal R	96.16
2avd_A	229	Catechol-O-methyltransferase; structural genomics,	96.15
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	96.15
3abi_A	365	Putative uncharacterized protein PH1688; L-lysine	96.14
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	96.14
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	96.14
1i1n_A	226	Protein-L-isoaspartate O-methyltransferase; S-aden	96.14
3e18_A	359	Oxidoreductase; dehydrogenase, NAD-binding, struct	96.14
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	96.12
4imr_A	275	3-oxoacyl-(acyl-carrier-protein) reductase; oxidor	96.12
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	96.12
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	96.12
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	96.11
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	96.1
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	96.1
3duw_A	223	OMT, O-methyltransferase, putative; alternating of	96.1
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	96.1
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	96.09
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	96.09
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	96.09
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	96.08
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	96.08
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	96.08
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	96.07
1kpg_A	287	CFA synthase;, cyclopropane-fatty-acyl-phospholipi	96.07
3uwp_A	438	Histone-lysine N-methyltransferase, H3 lysine-79;	96.07
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	96.07
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	96.06
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	96.02
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	96.02
3vc1_A	312	Geranyl diphosphate 2-C-methyltransferase; rossman	96.02
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	96.0
3ou2_A	218	SAM-dependent methyltransferase; O-methyltransfera	95.99
2z2v_A	365	Hypothetical protein PH1688; L-lysine dehydrogenas	95.98
1nvm_B	312	Acetaldehyde dehydrogenase (acylating), 4-hydroxy-	95.98
1l3i_A	192	Precorrin-6Y methyltransferase/putative decarboxyl	95.97
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	95.97
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	95.97
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	95.97
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	95.95
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	95.95
4h15_A	261	Short chain alcohol dehydrogenase-related dehydro;	95.94
3dr5_A	221	Putative O-methyltransferase; Q8NRD3, CGL1119, PF0	95.93
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	95.92
4iin_A	271	3-ketoacyl-acyl carrier protein reductase (FABG);	95.92
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	95.91
3ajd_A	274	Putative methyltransferase MJ0026; tRNA, M5C, ross	95.9
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	95.9
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	95.9
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	95.89
1nkv_A	256	Hypothetical protein YJHP; structural genomics, PS	95.89
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	95.88
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	95.88
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	95.88
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	95.88
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	95.87
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	95.87
2frx_A	479	Hypothetical protein YEBU; rossmann-type S-adenosy	95.84
3adn_A	294	Spermidine synthase; aminopropyltransferase, polya	95.84
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	95.84
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	95.83
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	95.83
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	95.83
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	95.83
4iiu_A	267	3-oxoacyl-[acyl-carrier protein] reductase; struct	95.82
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	95.82
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	95.82
1mjf_A	281	Spermidine synthase; spermidine synthetase, struct	95.8
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	95.8
3l9w_A	413	Glutathione-regulated potassium-efflux system Pro	95.78
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	95.77
1yb2_A	275	Hypothetical protein TA0852; structural genomics,	95.77
2yxl_A	450	PH0851 protein, 450AA long hypothetical FMU protei	95.76
1vbf_A	231	231AA long hypothetical protein-L-isoaspartate O-	95.76
3uce_A	223	Dehydrogenase; rossmann fold, oxidoreductase; HET:	95.76
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	95.75
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	95.75
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	95.75
1iy9_A	275	Spermidine synthase; rossmann fold, structural gen	95.75
3d64_A	494	Adenosylhomocysteinase; structural genomics, ssgci	95.74
2o57_A	297	Putative sarcosine dimethylglycine methyltransfera	95.73
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	95.73
1u2z_A	433	Histone-lysine N-methyltransferase, H3 lysine-79 s	95.73
1ej0_A	180	FTSJ; methyltransferase, adoMet, adenosyl methioni	95.71
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	95.69
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	95.69
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	95.69
3pwz_A	272	Shikimate dehydrogenase 3; alpha-beta, oxidoreduct	95.68
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	95.68
3m6w_A	464	RRNA methylase; rRNA methyltransferase, 5-methylcy	95.68
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	95.68
3g89_A	249	Ribosomal RNA small subunit methyltransferase G; 1	95.68
2egg_A	297	AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff	95.67
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	95.67
1vl5_A	260	Unknown conserved protein BH2331; putative methylt	95.66
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	95.65
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	95.63
2i7c_A	283	Spermidine synthase; transferase, structural genom	95.62
2b2c_A	314	Spermidine synthase; beta-alpha, transferase; 2.50	95.62
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	95.61
1pjz_A	203	Thiopurine S-methyltransferase; polymorphism, S-ad	95.61
3c3y_A	237	Pfomt, O-methyltransferase; plant secondary metabo	95.61
1sui_A	247	Caffeoyl-COA O-methyltransferase; rossmann fold, p	95.6
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	95.6
3o8q_A	281	Shikimate 5-dehydrogenase I alpha; structural geno	95.59
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	95.58
2o07_A	304	Spermidine synthase; structural genomics, structur	95.58
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	95.58
1spx_A	278	Short-chain reductase family member (5L265); paral	95.58
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	95.57
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	95.54
1v8b_A	479	Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2	95.54
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	95.54
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	95.53
1inl_A	296	Spermidine synthase; beta-barrel, rossman fold, st	95.53
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	95.53
3bus_A	273	REBM, methyltransferase; rebeccamycin synthesis; H	95.52
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	95.52
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	95.51
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	95.5
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	95.5
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	95.49
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	95.49
3tnl_A	315	Shikimate dehydrogenase; structural genomics, cent	95.48
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	95.47
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	95.46
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	95.45
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	95.44
3cbg_A	232	O-methyltransferase; cyanobacterium; HET: SAH FER	95.43
1wwk_A	307	Phosphoglycerate dehydrogenase; riken structural g	95.42
3g0o_A	303	3-hydroxyisobutyrate dehydrogenase; NAD(P), valine	95.41
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	95.38
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	95.38
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	95.37
1sqg_A	429	SUN protein, FMU protein; rossmann-fold, mixed bet	95.36
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	95.36
1xj5_A	334	Spermidine synthase 1; structural genomics, protei	95.33
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	95.33
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	95.33
3phh_A	269	Shikimate dehydrogenase; shikimate pathway, helico	95.31
3tr6_A	225	O-methyltransferase; cellular processes; HET: SAH;	95.31
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	95.3
4hkt_A	331	Inositol 2-dehydrogenase; structural genomics, nys	95.3
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	95.3
3bwc_A	304	Spermidine synthase; SAM, SGPP, structura genomics	95.3
4had_A	350	Probable oxidoreductase protein; structural genomi	95.3
1npy_A	271	Hypothetical shikimate 5-dehydrogenase-like protei	95.29
3rc1_A	350	Sugar 3-ketoreductase; sugar biosynthesis, TDP bin	95.29
3iv6_A	261	Putative Zn-dependent alcohol dehydrogenase; alpha	95.28
3h8v_A	292	Ubiquitin-like modifier-activating enzyme 5; rossm	95.28
4gek_A	261	TRNA (CMO5U34)-methyltransferase; structural genom	95.27
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	95.27
1nt2_A	210	Fibrillarin-like PRE-rRNA processing protein; adeM	95.25
3g5t_A	299	Trans-aconitate 3-methyltransferase; structural ge	95.25
3m33_A	226	Uncharacterized protein; structural genomics, PSI-	95.24
2pxx_A	215	Uncharacterized protein MGC2408; structural genomi	95.24
4ina_A	405	Saccharopine dehydrogenase; structural genomics, P	95.22
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	95.22
2pt6_A	321	Spermidine synthase; transferase, structural genom	95.21
1g8a_A	227	Fibrillarin-like PRE-rRNA processing protein; rRNA	95.19
3id6_C	232	Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase;	95.19
3sm3_A	235	SAM-dependent methyltransferases; NESG, structural	95.18
2gb4_A	252	Thiopurine S-methyltransferase; 18204406, thiopuri	95.18
2ekl_A	313	D-3-phosphoglycerate dehydrogenase; structural gen	95.18
4hp8_A	247	2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi	95.18
2gn4_A	344	FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann	95.17
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	95.17
1xxl_A	239	YCGJ protein; structural genomics, protein structu	95.15
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	95.15
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	95.15
1vpd_A	299	Tartronate semialdehyde reductase; structural geno	95.14
1xq6_A	253	Unknown protein; structural genomics, protein stru	95.14
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	95.14
3pef_A	287	6-phosphogluconate dehydrogenase, NAD-binding; gam	95.12
3s8m_A	422	Enoyl-ACP reductase; rossmann fold, oxidoreductase	95.11
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	95.1
4dll_A	320	2-hydroxy-3-oxopropionate reductase; structural ge	95.07
2j6i_A	364	Formate dehydrogenase; oxidoreductase, D-specific-	95.07
2p35_A	259	Trans-aconitate 2-methyltransferase; SAM dependent	95.04
1uir_A	314	Polyamine aminopropyltransferase; spermidien synth	95.03
2a9f_A	398	Putative malic enzyme ((S)-malate:NAD+ oxidoreduct	95.02
3kkz_A	267	Uncharacterized protein Q5LES9; putative methyltra	95.0
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	94.98
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	94.97
3f4k_A	257	Putative methyltransferase; structural genomics, P	94.96
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	94.95
3db2_A	354	Putative NADPH-dependent oxidoreductase; two domai	94.95
3jtm_A	351	Formate dehydrogenase, mitochondrial; mitochondrio	94.95
3tum_A	269	Shikimate dehydrogenase family protein; rossmann-f	94.93
2h78_A	302	Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC601	94.92
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	94.91
3q2i_A	354	Dehydrogenase; rossmann fold, UDP-sugar binding, N	94.91
3euw_A	344	MYO-inositol dehydrogenase; protein structure init	94.88
1dus_A	194	MJ0882; hypothetical protein, methanococcus jannas	94.88
3g07_A	292	7SK snRNA methylphosphate capping enzyme; structur	94.87
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	94.87
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	94.85
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	94.83
2z5l_A	511	Tylkr1, tylactone synthase starter module and modu	94.82
1zud_1	251	Adenylyltransferase THIF; thiamin, thiazole, prote	94.82
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	94.81
1nyt_A	271	Shikimate 5-dehydrogenase; alpha/beta domains, WID	94.81
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	94.79
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	94.78
3dli_A	240	Methyltransferase; PSI-II, NYSGXRC, structural gen	94.77
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	94.76
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	94.75
2g76_A	335	3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidor	94.75
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	94.74
3doj_A	310	AT3G25530, dehydrogenase-like protein; gamma-hydro	94.73
3e8s_A	227	Putative SAM dependent methyltransferase; NP_74470	94.73
2nac_A	393	NAD-dependent formate dehydrogenase; oxidoreductas	94.72
2dbq_A	334	Glyoxylate reductase; D-3-phosphoglycerate dehydro	94.69
1yzh_A	214	TRNA (guanine-N(7)-)-methyltransferase; alpha-beta	94.67
1id1_A	153	Putative potassium channel protein; RCK domain, E.	94.66
2glx_A	332	1,5-anhydro-D-fructose reductase; NADP(H) dependen	94.65
3evz_A	230	Methyltransferase; NYSGXRC, NEW YORK SGX research	94.63
3zu3_A	405	Putative reductase YPO4104/Y4119/YP_4011; oxidored	94.61
2axq_A	467	Saccharopine dehydrogenase; rossmann fold variant,	94.58
3ggo_A	314	Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-b	94.58
3l4b_C	218	TRKA K+ channel protien TM1088B; potassium channel	94.58
3bkw_A	243	MLL3908 protein, S-adenosylmethionine dependent me	94.57
2fca_A	213	TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bac	94.53
3gjy_A	317	Spermidine synthase; APC62791, structural genomics	94.52
3nzo_A	399	UDP-N-acetylglucosamine 4,6-dehydratase; structura	94.5
2ph5_A	480	Homospermidine synthase; alpha-beta protein, struc	94.48
3gg9_A	352	D-3-phosphoglycerate dehydrogenase oxidoreductase;	94.47
2z1m_A	345	GDP-D-mannose dehydratase; short-chain dehydrogena	94.45
2esr_A	177	Methyltransferase; structural genomics, hypothetic	94.44
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	94.43
2g5c_A	281	Prephenate dehydrogenase; TYRA, oxidoreductase; HE	94.42
3l8d_A	242	Methyltransferase; structural genomics, PSI, nysgr	94.39
3e23_A	211	Uncharacterized protein RPA2492; alpha-beta protei	94.37
3ntv_A	232	MW1564 protein; rossmann fold, putative methyltran	94.36
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	94.34
4fb5_A	393	Probable oxidoreductase protein; PSI-biology, nysg	94.33
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	94.32
3dlc_A	219	Putative S-adenosyl-L-methionine-dependent methylt	94.27
1xdz_A	240	Methyltransferase GIDB; MCSG, protein structure in	94.25
4dmg_A	393	Putative uncharacterized protein TTHA1493; rRNA, m	94.23
3cgg_A	195	SAM-dependent methyltransferase; NP_600671.1, meth	94.2
1rpn_A	335	GDP-mannose 4,6-dehydratase; short-chain dehydroge	94.19
3qp9_A	525	Type I polyketide synthase pikaii; rossmann fold,	94.18
2yqz_A	263	Hypothetical protein TTHA0223; RNA methyltransfera	94.15
3dxy_A	218	TRNA (guanine-N(7)-)-methyltransferase; rossmann f	94.13
3e9m_A	330	Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA,	94.06
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	94.05
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	94.04
2cmg_A	262	Spermidine synthase; transferase, putrescine amino	94.04
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	94.01
2gcg_A	330	Glyoxylate reductase/hydroxypyruvate reductase; NA	93.99
4eue_A	418	Putative reductase CA_C0462; TER, biofuel, synthet	93.96
3g5l_A	253	Putative S-adenosylmethionine dependent methyltran	93.94
1gdh_A	320	D-glycerate dehydrogenase; oxidoreductase(CHOH (D)	93.94
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	93.94
4hg2_A	257	Methyltransferase type 11; structural genomics, PS	93.92
3ezy_A	344	Dehydrogenase; structural genomics, unknown functi	93.91
3dh0_A	219	SAM dependent methyltransferase; cystal structure,	93.91
2fr1_A	486	Erythromycin synthase, eryai; short chain dehydrog	93.9
3c3p_A	210	Methyltransferase; NP_951602.1, structural genomic	93.89
2pk3_A	321	GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor	93.86
3ccf_A	279	Cyclopropane-fatty-acyl-phospholipid synthase; YP_	93.85
2dul_A	378	N(2),N(2)-dimethylguanosine tRNA methyltransferas;	93.85
3pdu_A	287	3-hydroxyisobutyrate dehydrogenase family protein;	93.83
4e5n_A	330	Thermostable phosphite dehydrogenase; D-2-hydroxya	93.83
3mje_A	496	AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.	93.81
2w2k_A	348	D-mandelate dehydrogenase; 2-hydroxyacid dehydroge	93.81
3mgg_A	276	Methyltransferase; NYSGXRC, PSI-II, protein struct	93.79
2ipx_A	233	RRNA 2'-O-methyltransferase fibrillarin; FBL, stru	93.75
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	93.75

>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}

Probab=100.00  E-value=1.2e-59  Score=437.39  Aligned_cols=345  Identities=40%  Similarity=0.656  Sum_probs=310.4

Q ss_pred             chhcceeEEEecCCceEEEEecCC--------CCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEE
Q 017916           14 GEEVNMAAWLLGVNTLKIQPFELP--------SLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVI   85 (364)
Q Consensus        14 ~~~~~~~~~~~~~~~~~~~~~~~p--------~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V   85 (364)
                      ++.+|+++++.+++.+++.+.|.|        +++++||+|||+++++|++|++.+.+...+.+...+|.++|||++|+|
T Consensus         5 ~~~~mka~~~~~~~~l~~~~~~~P~~~~~~~~~~~~~eVlVkv~a~gi~~~D~~~~~~~~~~~~~~~~p~v~G~E~~G~V   84 (363)
T 3m6i_A            5 ASKTNIGVFTNPQHDLWISEASPSLESVQKGEELKEGEVTVAVRSTGICGSDVHFWKHGCIGPMIVECDHVLGHESAGEV   84 (363)
T ss_dssp             CCSCCEEEEECTTCCEEEEECSSCHHHHHHTCSCCTTEEEEEEEEEECCHHHHHHHHHSBSSSCBCCSCEECCCEEEEEE
T ss_pred             CcccceeEEEeCCCcEEEEEecCCccccccCCCcCCCeEEEEEeEEeecHhhHHHHcCCCCCCccCCCCcccCcceEEEE
Confidence            455689999999999999999999        999999999999999999999998865544445678999999999999


Q ss_pred             EEeCCCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCccchhhhh
Q 017916           86 EKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE  165 (364)
Q Consensus        86 ~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~lP~~~~~~~aa~~~  165 (364)
                      +++|++|++|++||||++.+..+|..|.+|+.++.++|.+..+.+....+|+|+||+++++++++++|+ +++++||++.
T Consensus        85 ~~vG~~v~~~~vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~g~~~~~G~~aey~~v~~~~~~~iP~-~s~~~aa~~~  163 (363)
T 3m6i_A           85 IAVHPSVKSIKVGDRVAIEPQVICNACEPCLTGRYNGCERVDFLSTPPVPGLLRRYVNHPAVWCHKIGN-MSYENGAMLE  163 (363)
T ss_dssp             EEECTTCCSCCTTCEEEECCEECCSCSHHHHTTCGGGCTTCEETTSTTSCCSCBSEEEEEGGGEEECTT-CCHHHHHHHH
T ss_pred             EEECCCCCCCCCCCEEEEecccCCCCCHHHHCcCcccCCCccccCCCCCCccceeEEEEehhhEEECCC-CCHHHHHhhh
Confidence            999999999999999999999999999999999999999998888766889999999999999999999 9999999888


Q ss_pred             hhHHHHHHHHHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCC---CcccHHH
Q 017916          166 PLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVST---NLQDIAE  242 (364)
Q Consensus       166 ~~~~a~~~l~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~---~~~~~~~  242 (364)
                      +++|||++++.+++++|++|||+|+|++|++++|+|+.+|+++|++++.+++|.++++++ ++.+++|..   ..+++.+
T Consensus       164 ~~~ta~~~l~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l-~~~~~~~~~~~~~~~~~~~  242 (363)
T 3m6i_A          164 PLSVALAGLQRAGVRLGDPVLICGAGPIGLITMLCAKAAGACPLVITDIDEGRLKFAKEI-CPEVVTHKVERLSAEESAK  242 (363)
T ss_dssp             HHHHHHHHHHHHTCCTTCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHH-CTTCEEEECCSCCHHHHHH
T ss_pred             HHHHHHHHHHHcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh-chhcccccccccchHHHHH
Confidence            899999999889999999999999999999999999999997789999999999999999 766665532   2356666


Q ss_pred             HHHHHHHHcCCCccEEEECCCCHHHHHHHHHhcccCCEEEEEcCCCCCccccchhhhhcCcEEEeeccCCCcHHHHHHHH
Q 017916          243 EVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKNTWPLCLELL  322 (364)
Q Consensus       243 ~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  322 (364)
                      .+++++  .+.++|++|||+|++..++.++++|+++|+++.+|.......++...+..+++++.+.+...+.++++++++
T Consensus       243 ~v~~~t--~g~g~Dvvid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~l~  320 (363)
T 3m6i_A          243 KIVESF--GGIEPAVALECTGVESSIAAAIWAVKFGGKVFVIGVGKNEIQIPFMRASVREVDLQFQYRYCNTWPRAIRLV  320 (363)
T ss_dssp             HHHHHT--SSCCCSEEEECSCCHHHHHHHHHHSCTTCEEEECCCCCSCCCCCHHHHHHHTCEEEECCSCSSCHHHHHHHH
T ss_pred             HHHHHh--CCCCCCEEEECCCChHHHHHHHHHhcCCCEEEEEccCCCCccccHHHHHhcCcEEEEccCCHHHHHHHHHHH
Confidence            666653  367899999999987789999999999999999997666556677788899999999988788999999999


Q ss_pred             HcCCCCCCCceEEEeeCChhhHHHHHHHHhcC-CCceEEEEeC
Q 017916          323 RSGKIDVKPLVTHRFGFSQKEVEEAFETSARG-GTAIKVMFNL  364 (364)
Q Consensus       323 ~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~-~~~gkvvv~~  364 (364)
                      ++|++.+.+.+++.|+|  +++++||+.++++ ...+|+++++
T Consensus       321 ~~g~i~~~~~i~~~~~l--~~~~~A~~~~~~~~~~~~Kvvi~~  361 (363)
T 3m6i_A          321 ENGLVDLTRLVTHRFPL--EDALKAFETASDPKTGAIKVQIQS  361 (363)
T ss_dssp             HTTSSCCGGGEEEEEEG--GGHHHHHHHHHCGGGCCSEEEEEC
T ss_pred             HhCCCChHHceeeeeeH--HHHHHHHHHHhccCCCeEEEEEec
Confidence            99999888889999999  9999999999988 7889999874

>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A

Probab=100.00  E-value=3e-58  Score=426.61  Aligned_cols=342  Identities=50%  Similarity=0.869  Sum_probs=303.4

Q ss_pred             cceeEEEecCCceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCCCCCCCC
Q 017916           17 VNMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLV   96 (364)
Q Consensus        17 ~~~~~~~~~~~~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~   96 (364)
                      +|+++++.+++.+++.+.|.|+++++||+|||+++|+|++|++.+.|.+.+.+...+|.++|||++|+|+++|++|++|+
T Consensus         7 ~mka~~~~~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~v~G~E~~G~V~~vG~~V~~~~   86 (356)
T 1pl8_A            7 NNLSLVVHGPGDLRLENYPIPEPGPNEVLLRMHSVGICGSDVHYWEYGRIGNFIVKKPMVLGHEASGTVEKVGSSVKHLK   86 (356)
T ss_dssp             CCEEEEEEETTEEEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHHSEETTEECSSCEECCCEEEEEEEEECTTCCSCC
T ss_pred             CceEEEEecCCcEEEEEccCCCCCCCeEEEEEEEeeeCHHHHHHHcCCCCCCccCCCCcccccceEEEEEEECCCCCCCC
Confidence            47899999888999999999999999999999999999999998875433222346799999999999999999999999


Q ss_pred             CCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCccchhhhhhhHHHHHHHHH
Q 017916           97 PGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRR  176 (364)
Q Consensus        97 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~lP~~~~~~~aa~~~~~~~a~~~l~~  176 (364)
                      +||||++.+..+|..|.+|+.++.++|.+..+.+....+|+|+||+++++++++++|+++++++|+++.++++||++++.
T Consensus        87 vGdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~~G~~aey~~v~~~~~~~iP~~l~~~~aa~~~~~~ta~~al~~  166 (356)
T 1pl8_A           87 PGDRVAIEPGAPRENDEFCKMGRYNLSPSIFFCATPPDDGNLCRFYKHNAAFCYKLPDNVTFEEGALIEPLSVGIHACRR  166 (356)
T ss_dssp             TTCEEEECSEECSSCCHHHHTTCGGGCTTCEETTBTTBCCSCBSEEEEEGGGEEECCTTSCHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeccCCCCCChHHHCcCcccCCCccccCcCCCCCccccEEEeehHHEEECcCCCCHHHHHhhchHHHHHHHHHh
Confidence            99999999999999999999999999999877665456899999999999999999999999999988889999999988


Q ss_pred             cCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCC-cccHHHHHHHHHHHcCCCc
Q 017916          177 ANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTN-LQDIAEEVEKIQKAMGTGI  255 (364)
Q Consensus       177 ~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~-~~~~~~~i~~~~~~~~~~~  255 (364)
                      +++++|++|||+|+|++|++++|+|+.+|++.|++++.+++|.++++++|++++++++.. .+++.+.+++..   +.++
T Consensus       167 ~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~~i~~~~---~~g~  243 (356)
T 1pl8_A          167 GGVTLGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGADLVLQISKESPQEIARKVEGQL---GCKP  243 (356)
T ss_dssp             HTCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCSEEEECSSCCHHHHHHHHHHHH---TSCC
T ss_pred             cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEEcCcccccchHHHHHHHHh---CCCC
Confidence            999999999999999999999999999999778999999999999999999998886521 245555665543   3689


Q ss_pred             cEEEECCCCHHHHHHHHHhcccCCEEEEEcCCCCCccccchhhhhcCcEEEeeccCCCcHHHHHHHHHcCCCCCCCceEE
Q 017916          256 DVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTH  335 (364)
Q Consensus       256 d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~~  335 (364)
                      |++||++|++..+..++++|+++|+++.+|.......++...+..+++++.+...+...++++++++++|++.+.+.+++
T Consensus       244 D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~l~~~g~i~~~~~i~~  323 (356)
T 1pl8_A          244 EVTIECTGAEASIQAGIYATRSGGTLVLVGLGSEMTTVPLLHAAIREVDIKGVFRYCNTWPVAISMLASKSVNVKPLVTH  323 (356)
T ss_dssp             SEEEECSCCHHHHHHHHHHSCTTCEEEECSCCCSCCCCCHHHHHHTTCEEEECCSCSSCHHHHHHHHHTTSCCCGGGEEE
T ss_pred             CEEEECCCChHHHHHHHHHhcCCCEEEEEecCCCCCccCHHHHHhcceEEEEecccHHHHHHHHHHHHcCCCChHHheEE
Confidence            99999999887889999999999999999875444456666788899999998877788999999999999877788899


Q ss_pred             EeeCChhhHHHHHHHHhcCCCceEEEEeC
Q 017916          336 RFGFSQKEVEEAFETSARGGTAIKVMFNL  364 (364)
Q Consensus       336 ~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  364 (364)
                      +|+|  +++++|++.++++ ..||+|+++
T Consensus       324 ~~~l--~~~~~A~~~~~~~-~~gKvvi~~  349 (356)
T 1pl8_A          324 RFPL--EKALEAFETFKKG-LGLKIMLKC  349 (356)
T ss_dssp             EEEG--GGHHHHHHHHHTT-CCSEEEEEC
T ss_pred             EecH--HHHHHHHHHHhCC-CceEEEEeC
Confidence            9999  9999999999988 899999875

>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=3.2e-58  Score=425.87  Aligned_cols=345  Identities=49%  Similarity=0.841  Sum_probs=303.8

Q ss_pred             hcceeEEEecCCceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCCCCCCC
Q 017916           16 EVNMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTL   95 (364)
Q Consensus        16 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~   95 (364)
                      .+|+++++.+++.+++.+.|.|+++++||+|||++++||++|++.+.+.....+...+|.++|||++|+|+++|++|++|
T Consensus         3 ~~mka~~~~~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~~g~~~~~~~~~p~v~G~E~~G~V~~vG~~v~~~   82 (352)
T 1e3j_A            3 SDNLSAVLYKQNDLRLEQRPIPEPKEDEVLLQMAYVGICGSDVHYYEHGRIADFIVKDPMVIGHEASGTVVKVGKNVKHL   82 (352)
T ss_dssp             -CCEEEEEEETTEEEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHHSBSSSCBCCSCEECCCEEEEEEEEECTTCCSC
T ss_pred             ccCEEEEEEcCCcEEEEEecCCCCCCCeEEEEEEEEEEChhhHHHHcCCCCccccCCCCccccccceEEEEEeCCCCCCC
Confidence            45899999998999999999999999999999999999999999887543322234679999999999999999999999


Q ss_pred             CCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCccchhhhhhhHHHHHHHH
Q 017916           96 VPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACR  175 (364)
Q Consensus        96 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~lP~~~~~~~aa~~~~~~~a~~~l~  175 (364)
                      ++||+|++.+..+|..|.+|+.++.++|.+..+.+....+|+|+||+++++++++++|+++++++|+++.++++||++++
T Consensus        83 ~vGdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~~~~~~ta~~al~  162 (352)
T 1e3j_A           83 KKGDRVAVEPGVPCRRCQFCKEGKYNLCPDLTFCATPPDDGNLARYYVHAADFCHKLPDNVSLEEGALLEPLSVGVHACR  162 (352)
T ss_dssp             CTTCEEEECCEECCSSSHHHHTTCGGGCTTCEETTBTTBCCSCBSEEEEEGGGEEECCTTSCHHHHHTHHHHHHHHHHHH
T ss_pred             CCCCEEEEcCcCCCCCChhhhCcCcccCCCCcccCcCCCCccceeEEEeChHHeEECcCCCCHHHHHhhchHHHHHHHHH
Confidence            99999999999999999999999999999988776555689999999999999999999999999998888999999998


Q ss_pred             HcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHH-cCCC
Q 017916          176 RANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKA-MGTG  254 (364)
Q Consensus       176 ~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~-~~~~  254 (364)
                      .+++++|++|||+|+|++|++++|+|+.+|++ |++++.++++.++++++|++.++++.+ ..++.+.+++.... .+.+
T Consensus       163 ~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~-Vi~~~~~~~~~~~~~~lGa~~~~~~~~-~~~~~~~i~~~~~~~~g~g  240 (352)
T 1e3j_A          163 RAGVQLGTTVLVIGAGPIGLVSVLAAKAYGAF-VVCTARSPRRLEVAKNCGADVTLVVDP-AKEEESSIIERIRSAIGDL  240 (352)
T ss_dssp             HHTCCTTCEEEEECCSHHHHHHHHHHHHTTCE-EEEEESCHHHHHHHHHTTCSEEEECCT-TTSCHHHHHHHHHHHSSSC
T ss_pred             hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCE-EEEEcCCHHHHHHHHHhCCCEEEcCcc-cccHHHHHHHHhccccCCC
Confidence            89999999999999999999999999999995 888889999999999999999888652 14566666654310 1468


Q ss_pred             ccEEEECCCCHHHHHHHHHhcccCCEEEEEcCCCCCccccchhhhhcCcEEEeeccCCCcHHHHHHHHHcCCCCCCCceE
Q 017916          255 IDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVT  334 (364)
Q Consensus       255 ~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~  334 (364)
                      +|++||++|+...++.++++|+++|+++.+|.......++...+..+++++.+...+...++++++++++|++.+.+.++
T Consensus       241 ~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~l~~~g~i~~~~~i~  320 (352)
T 1e3j_A          241 PNVTIDCSGNEKCITIGINITRTGGTLMLVGMGSQMVTVPLVNACAREIDIKSVFRYCNDYPIALEMVASGRCNVKQLVT  320 (352)
T ss_dssp             CSEEEECSCCHHHHHHHHHHSCTTCEEEECSCCSSCCCCCHHHHHTTTCEEEECCSCSSCHHHHHHHHHTTSCCCGGGEE
T ss_pred             CCEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCCCccccHHHHHhcCcEEEEeccchHHHHHHHHHHHcCCCChHHhee
Confidence            99999999987788999999999999999987544445566678899999999887778899999999999987788889


Q ss_pred             EEeeCChhhHHHHHHHHhcCC-CceEEEEeC
Q 017916          335 HRFGFSQKEVEEAFETSARGG-TAIKVMFNL  364 (364)
Q Consensus       335 ~~~~~~~~~~~~a~~~~~~~~-~~gkvvv~~  364 (364)
                      ++|+|  +++++|++.+++++ ..||+|+++
T Consensus       321 ~~~~l--~~~~~A~~~~~~~~~~~~Kvvi~~  349 (352)
T 1e3j_A          321 HSFKL--EQTVDAFEAARKKADNTIKVMISC  349 (352)
T ss_dssp             EEEEG--GGHHHHHHHHHHCCTTCSEEEEEC
T ss_pred             EEecH--HHHHHHHHHHhcCCCCceEEEEec
Confidence            99999  99999999999887 689999975

>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*

Probab=100.00  E-value=1.4e-58  Score=430.38  Aligned_cols=346  Identities=29%  Similarity=0.538  Sum_probs=306.9

Q ss_pred             ccccchhcceeEEEecCCceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeC
Q 017916           10 EKEDGEEVNMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVG   89 (364)
Q Consensus        10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG   89 (364)
                      +...++.+|+++++.++..+++.+.|.|+++++||+|||++++||++|++.+.|.+    ...+|.++|+|++|+|+++|
T Consensus        16 ~~~~~p~~mkA~v~~~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~----~~~~p~v~G~e~~G~V~~vG   91 (370)
T 4ej6_A           16 ENLYFQSMMKAVRLESVGNISVRNVGIPEPGPDDLLVKVEACGICGTDRHLLHGEF----PSTPPVTLGHEFCGIVVEAG   91 (370)
T ss_dssp             -----CCEEEEEEEEETTEEEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHTTSS----CCCSSEECCCSEEEEEEEEC
T ss_pred             cccccchheEEEEEecCCceEEEEccCCCCCCCeEEEEEEEEeecHHHHHHHcCCC----CCCCCeecCcceEEEEEEEC
Confidence            44567778999999999999999999999999999999999999999999998754    35679999999999999999


Q ss_pred             CCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCccchhhhhhhHH
Q 017916           90 SEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSV  169 (364)
Q Consensus        90 ~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~lP~~~~~~~aa~~~~~~~  169 (364)
                      ++|++|++||+|++.+..+|..|++|..++.++|.+....+. ..+|+|+||+++++++++++|+++++++||++.++++
T Consensus        92 ~~v~~~~vGdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~-~~~G~~aey~~v~~~~~~~~P~~~~~~~aal~~~~~t  170 (370)
T 4ej6_A           92 SAVRDIAPGARITGDPNISCGRCPQCQAGRVNLCRNLRAIGI-HRDGGFAEYVLVPRKQAFEIPLTLDPVHGAFCEPLAC  170 (370)
T ss_dssp             TTCCSSCTTCEEEECCEECCSSSHHHHTTCGGGCTTCEEBTT-TBCCSSBSEEEEEGGGEEEECTTSCTTGGGGHHHHHH
T ss_pred             CCCCCCCCCCEEEECCCCCCCCChHHhCcCcccCCCccccCC-CCCCcceEEEEEchhhEEECCCCCCHHHHhhhhHHHH
Confidence            999999999999999999999999999999999999887765 4789999999999999999999999999997779999


Q ss_pred             HHHHHHHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHH
Q 017916          170 GLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQK  249 (364)
Q Consensus       170 a~~~l~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~  249 (364)
                      ||++++.+++++|++|||+|+|++|++++|+|+++|++.|++++++++|.++++++|++.++++..  +++.+.+++...
T Consensus       171 a~~~l~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~--~~~~~~i~~~~~  248 (370)
T 4ej6_A          171 CLHGVDLSGIKAGSTVAILGGGVIGLLTVQLARLAGATTVILSTRQATKRRLAEEVGATATVDPSA--GDVVEAIAGPVG  248 (370)
T ss_dssp             HHHHHHHHTCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHTCSEEECTTS--SCHHHHHHSTTS
T ss_pred             HHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCCEEECCCC--cCHHHHHHhhhh
Confidence            999998899999999999999999999999999999988999999999999999999999988643  577777665221


Q ss_pred             HcCCCccEEEECCCCHHHHHHHHHhcccCCEEEEEcCCCC--CccccchhhhhcCcEEEeeccCCCcHHHHHHHHHcCCC
Q 017916          250 AMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHH--EMTVPLTPAAVREVDVVGVFRYKNTWPLCLELLRSGKI  327 (364)
Q Consensus       250 ~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~  327 (364)
                      ..++++|++|||+|+++.+..++++|+++|+++.+|....  ...++...++.+++++.|.+.....++++++++++|++
T Consensus       249 ~~~gg~Dvvid~~G~~~~~~~~~~~l~~~G~vv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~l~~~g~i  328 (370)
T 4ej6_A          249 LVPGGVDVVIECAGVAETVKQSTRLAKAGGTVVILGVLPQGEKVEIEPFDILFRELRVLGSFINPFVHRRAADLVATGAI  328 (370)
T ss_dssp             SSTTCEEEEEECSCCHHHHHHHHHHEEEEEEEEECSCCCTTCCCCCCHHHHHHTTCEEEECCSCTTCHHHHHHHHHTTCS
T ss_pred             ccCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEEeccCCCCccccCHHHHHhCCcEEEEeccChHHHHHHHHHHHcCCC
Confidence            2244899999999988899999999999999999986544  44666777889999999998888889999999999999


Q ss_pred             CCCCceEEEeeCChhhHHHHHHHHhcCC-CceEEEEeC
Q 017916          328 DVKPLVTHRFGFSQKEVEEAFETSARGG-TAIKVMFNL  364 (364)
Q Consensus       328 ~~~~~~~~~~~~~~~~~~~a~~~~~~~~-~~gkvvv~~  364 (364)
                      .+.+.++++|+|  +++++|++.++++. ..+|+++++
T Consensus       329 ~~~~~i~~~~~l--~~~~~A~~~~~~~~~~~~kvv~~~  364 (370)
T 4ej6_A          329 EIDRMISRRISL--DEAPDVISNPAAAGEVKVLVIPSA  364 (370)
T ss_dssp             CCGGGEEEEECG--GGHHHHHHSCCCTTCSEEEECCC-
T ss_pred             ChhHcEEEEEEH--HHHHHHHHHHHcCCCCeEEEEEcc
Confidence            888889999999  99999999998875 568888763

>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}

Probab=100.00  E-value=4.1e-57  Score=417.83  Aligned_cols=336  Identities=28%  Similarity=0.478  Sum_probs=301.9

Q ss_pred             ceeEEEecCCceEEEEecCCCC-CCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCCCCCCCC
Q 017916           18 NMAAWLLGVNTLKIQPFELPSL-GPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLV   96 (364)
Q Consensus        18 ~~~~~~~~~~~~~~~~~~~p~~-~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~   96 (364)
                      |||+++.++..+++.+.|.|++ +||||||||.++|||++|++.+.|..    ...+|+++|||++|+|+++|++|++++
T Consensus         1 MkAvv~~~~g~l~v~e~p~P~~~~~~eVlVkv~a~gi~~sD~~~~~g~~----~~~~P~i~G~E~~G~V~~vG~~V~~~~   76 (346)
T 4a2c_A            1 MKSVVNDTDGIVRVAESVIPEIKHQDEVRVKIASSGLCGSDLPRIFKNG----AHYYPITLGHEFSGYIDAVGSGVDDLH   76 (346)
T ss_dssp             CEEEEECSSSCEEEEECCCCCCCSTTEEEEEEEEEECCTTHHHHHHSSC----SSSSSBCCCCEEEEEEEEECTTCCSCC
T ss_pred             CCEEEEecCCCEEEEEEeCCCCCCcCEEEEEEEEEEECHHHHHHHcCCC----CCCCCccccEEEEEEEEEECCCccccc
Confidence            7899999999999999999985 79999999999999999999887643    246799999999999999999999999


Q ss_pred             CCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCccchhhhhhhHHHHHHHHH
Q 017916           97 PGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRR  176 (364)
Q Consensus        97 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~lP~~~~~~~aa~~~~~~~a~~~l~~  176 (364)
                      +||+|++.+...|..|.+|..++.++|.+..+.+. ..+|+|+||+++++++++++|+++++++||+++++++++++++.
T Consensus        77 ~GdrV~~~~~~~~g~c~~c~~g~~~~c~~~~~~g~-~~~G~~aey~~v~~~~~~~iP~~l~~~~aa~l~~~~~~~~~~~~  155 (346)
T 4a2c_A           77 PGDAVACVPLLPCFTCPECLKGFYSQCAKYDFIGS-RRDGGFAEYIVVKRKNVFALPTDMPIEDGAFIEPITVGLHAFHL  155 (346)
T ss_dssp             TTCEEEECCEECCSCSHHHHTTCGGGCSSCEEBTT-TBCCSSBSEEEEEGGGEEECCTTSCGGGGGGHHHHHHHHHHHHH
T ss_pred             CCCeEEeeeccCCCCcccccCCccccCCCcccccC-CCCcccccccccchheEEECCCCCCHHHHHhchHHHHHHHHHHH
Confidence            99999999999999999999999999999887764 67899999999999999999999999999998888888888899


Q ss_pred             cCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcCCCcc
Q 017916          177 ANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGID  256 (364)
Q Consensus       177 ~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d  256 (364)
                      .++++|++|||+|+|++|++++|+|+++|+.++++++++++|.+++++||+++++++.+  .++.+.++.++  .+.++|
T Consensus       156 ~~~~~g~~VlV~GaG~vG~~aiq~ak~~G~~~vi~~~~~~~k~~~a~~lGa~~~i~~~~--~~~~~~~~~~~--~~~g~d  231 (346)
T 4a2c_A          156 AQGCENKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDISSEKLALAKSFGAMQTFNSSE--MSAPQMQSVLR--ELRFNQ  231 (346)
T ss_dssp             TTCCTTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCSEEEETTT--SCHHHHHHHHG--GGCSSE
T ss_pred             hccCCCCEEEEECCCCcchHHHHHHHHcCCcEEEEEechHHHHHHHHHcCCeEEEeCCC--CCHHHHHHhhc--ccCCcc
Confidence            99999999999999999999999999999998899999999999999999999998754  56666666654  367899


Q ss_pred             EEEECCCCHHHHHHHHHhcccCCEEEEEcCCCCCcc---ccchhhhhcCcEEEeeccC------CCcHHHHHHHHHcCCC
Q 017916          257 VSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMT---VPLTPAAVREVDVVGVFRY------KNTWPLCLELLRSGKI  327 (364)
Q Consensus       257 ~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~---~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~l~~g~~  327 (364)
                      ++||++|++..++.++++++++|+++.+|....+..   .+...++.|++++.|++..      .+.++++++++++|++
T Consensus       232 ~v~d~~G~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~k~~~i~G~~~~~~~~~~~~~~~~~~~l~~~g~l  311 (346)
T 4a2c_A          232 LILETAGVPQTVELAVEIAGPHAQLALVGTLHQDLHLTSATFGKILRKELTVIGSWMNYSSPWPGQEWETASRLLTERKL  311 (346)
T ss_dssp             EEEECSCSHHHHHHHHHHCCTTCEEEECCCCSSCEEECHHHHHHHHHHTCEEEECCTTCCSSTTCHHHHHHHHHHHTTCS
T ss_pred             cccccccccchhhhhhheecCCeEEEEEeccCCCccccccCHHHHhhceeEEEEEeccccCcchHHHHHHHHHHHHcCCC
Confidence            999999999999999999999999999997655432   3344577899999997653      4578999999999999


Q ss_pred             CCCCceEEEeeCChhhHHHHHHHHhcCCCceEEEEeC
Q 017916          328 DVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  364 (364)
Q Consensus       328 ~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  364 (364)
                      ++++.++++|+|  +++++|++.++++...||+||+.
T Consensus       312 ~~~~lI~~~~~l--~~~~~A~~~l~~~~~~GKvVl~P  346 (346)
T 4a2c_A          312 SLEPLIAHRGSF--ESFAQAVRDIARNAMPGKVLLIP  346 (346)
T ss_dssp             CCGGGEEEEECH--HHHHHHHHHHTTSCCCSEEEECC
T ss_pred             CCCccEeEEEeH--HHHHHHHHHHHcCCCceEEEEEC
Confidence            888889999999  99999999999999999999863

>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*

Probab=100.00  E-value=6.8e-57  Score=416.36  Aligned_cols=340  Identities=31%  Similarity=0.563  Sum_probs=286.8

Q ss_pred             hhcceeEEEecCC-ceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhh-cccCCccCCCCcccccceeEEEEEeCCCC
Q 017916           15 EEVNMAAWLLGVN-TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKT-LRCADFVVKEPMVIGHECAGVIEKVGSEV   92 (364)
Q Consensus        15 ~~~~~~~~~~~~~-~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g-~~~~~~~~~~p~~~G~e~~G~V~~vG~~v   92 (364)
                      |.+|+++++.++. .+++.+.|.|+++++||+|||.++++|++|++.+.| .+.. ....+|.++|||++|+|+++|++|
T Consensus         2 m~~mka~~~~~~g~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~-~~~~~p~v~G~E~~G~V~~vG~~v   80 (348)
T 2d8a_A            2 SEKMVAIMKTKPGYGAELVEVDVPKPGPGEVLIKVLATSICGTDLHIYEWNEWAQ-SRIKPPQIMGHEVAGEVVEIGPGV   80 (348)
T ss_dssp             -CEEEEEEECSSSSSCEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHHTCTTHH-HHCCSSEECCCEEEEEEEEECTTC
T ss_pred             CCcceEEEEECCCCCEEEEECCCCCCCcCEEEEEEeEEEecHHHHHHHcCCCCCc-ccCCCCCccCccceEEEEEECCCC
Confidence            4568999998877 899999999999999999999999999999999887 3210 114679999999999999999999


Q ss_pred             CCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCccchhhhhhhHHHHH
Q 017916           93 KTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLH  172 (364)
Q Consensus        93 ~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~lP~~~~~~~aa~~~~~~~a~~  172 (364)
                      ++|++||||++.+..+|..|.+|+.++.++|++..+++. ..+|+|+||+++++++++++|+++++++||++++++|||+
T Consensus        81 ~~~~vGdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~-~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~~~~~~ta~~  159 (348)
T 2d8a_A           81 EGIEVGDYVSVETHIVCGKCYACRRGQYHVCQNTKIFGV-DTDGVFAEYAVVPAQNIWKNPKSIPPEYATLQEPLGNAVD  159 (348)
T ss_dssp             CSCCTTCEEEECCEECCSCCC------------CEETTT-SSCCSSBSEEEEEGGGEEECCTTSCHHHHTTHHHHHHHHH
T ss_pred             CcCCCCCEEEEcCCCCCCCChhhhCcCcccCCCCCeecC-CCCCcCcceEEeChHHeEECCCCCCHHHHHhhhHHHHHHH
Confidence            999999999999999999999999999999998876653 4679999999999999999999999999998888999999


Q ss_pred             HHHHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcC
Q 017916          173 ACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMG  252 (364)
Q Consensus       173 ~l~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~  252 (364)
                      +++.+++ +|++|||+|+|++|++++|+|+.+|++.|+++++++++.++++++|++++++++.  +++.+.+++++  .+
T Consensus       160 ~l~~~~~-~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~--~~~~~~v~~~~--~g  234 (348)
T 2d8a_A          160 TVLAGPI-SGKSVLITGAGPLGLLGIAVAKASGAYPVIVSEPSDFRRELAKKVGADYVINPFE--EDVVKEVMDIT--DG  234 (348)
T ss_dssp             HHTTSCC-TTCCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHHHHTCSEEECTTT--SCHHHHHHHHT--TT
T ss_pred             HHHhcCC-CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEECCCC--cCHHHHHHHHc--CC
Confidence            9988889 9999999999999999999999999966888889999999999999999887643  57777776653  24


Q ss_pred             CCccEEEECCCCHHHHHHHHHhcccCCEEEEEcCCCCCccccc-hhhhhcCcEEEeeccC--CCcHHHHHHHHHcCCCCC
Q 017916          253 TGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPL-TPAAVREVDVVGVFRY--KNTWPLCLELLRSGKIDV  329 (364)
Q Consensus       253 ~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~g~~~~  329 (364)
                      .++|++||++|.++.++.++++|+++|+++.+|.......++. ..+..+++++.+....  .+.++++++++++|++++
T Consensus       235 ~g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~l~~~g~i~~  314 (348)
T 2d8a_A          235 NGVDVFLEFSGAPKALEQGLQAVTPAGRVSLLGLYPGKVTIDFNNLIIFKALTIYGITGRHLWETWYTVSRLLQSGKLNL  314 (348)
T ss_dssp             SCEEEEEECSCCHHHHHHHHHHEEEEEEEEECCCCSSCCCCCHHHHTTTTTCEEEECCCCCSHHHHHHHHHHHHHTCCCC
T ss_pred             CCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEccCCCCcccCchHHHHhCCcEEEEecCCCcHHHHHHHHHHHHcCCCCh
Confidence            5899999999987899999999999999999986554445555 5677899999997654  467899999999999877


Q ss_pred             CCceEEEee-CChhhHHHHHHHHhcCCCceEEEEeC
Q 017916          330 KPLVTHRFG-FSQKEVEEAFETSARGGTAIKVMFNL  364 (364)
Q Consensus       330 ~~~~~~~~~-~~~~~~~~a~~~~~~~~~~gkvvv~~  364 (364)
                      ++.++++|+ |  +++++|++.+++ ...||+|+++
T Consensus       315 ~~~i~~~~~gl--~~~~~A~~~~~~-~~~gKvvi~~  347 (348)
T 2d8a_A          315 DPIITHKYKGF--DKYEEAFELMRA-GKTGKVVFML  347 (348)
T ss_dssp             TTTEEEEEESS--TTHHHHHHHHHT-TCCSEEEEEC
T ss_pred             HHhheeeCCCH--HHHHHHHHHHhC-CCceEEEEee
Confidence            889999999 9  999999999987 5789999975

>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}

Probab=100.00  E-value=1.6e-56  Score=418.29  Aligned_cols=343  Identities=24%  Similarity=0.372  Sum_probs=296.4

Q ss_pred             ccchhcceeEEEecCC-ceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCC
Q 017916           12 EDGEEVNMAAWLLGVN-TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGS   90 (364)
Q Consensus        12 ~~~~~~~~~~~~~~~~-~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~   90 (364)
                      +.++.+|+|+++.++. .+++.+.|.|+++++||+|||++++||++|++.+.|.+.   ...+|.++|||++|+|+++|+
T Consensus         3 ~~~~~tmkA~v~~~~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~---~~~~P~v~GhE~~G~V~~vG~   79 (378)
T 3uko_A            3 QGQVITCKAAVAYEPNKPLVIEDVQVAPPQAGEVRIKILYTALCHTDAYTWSGKDP---EGLFPCILGHEAAGIVESVGE   79 (378)
T ss_dssp             TTSCEEEEEEEBCSTTSCCEEEEEEECCCCTTEEEEEEEEEEECHHHHHHHTTCCT---TCCSSBCCCCEEEEEEEEECT
T ss_pred             cccceeeEEEEEecCCCccEEEEecCCCCCCCeEEEEEEEeecCHHHHHHhcCCCC---CCCCCccCCccceEEEEEeCC
Confidence            3456679999998775 499999999999999999999999999999999987642   246899999999999999999


Q ss_pred             CCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCcccccc---------------------CCCCCcceeEEEecCCce
Q 017916           91 EVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFAT---------------------PPVHGSLANQVVHPADLC  149 (364)
Q Consensus        91 ~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------~~~~g~~~~~v~~~~~~~  149 (364)
                      +|++|++||||++.+..+|..|++|+.++.++|.+......                     ....|+|+||++++++++
T Consensus        80 ~v~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~  159 (378)
T 3uko_A           80 GVTEVQAGDHVIPCYQAECRECKFCKSGKTNLCGKVRSATGVGIMMNDRKSRFSVNGKPIYHFMGTSTFSQYTVVHDVSV  159 (378)
T ss_dssp             TCCSCCTTCEEEECSSCCCSSSHHHHHTSCSCCCSSHHHHTTTCCTTTSSCSEEETTEEEBCCTTTCCSBSEEEEEGGGE
T ss_pred             CCCcCCCCCEEEEecCCCCCCChhhhCcCcCcCcCcccccccccccccCccccccCCcccccccCCcceEeEEEechhhe
Confidence            99999999999999999999999999999999998643110                     112379999999999999


Q ss_pred             EECCCCCCccchhhhh-hhHHHHHHH-HHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCC
Q 017916          150 FKLPDNVSLEEGAMCE-PLSVGLHAC-RRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGA  227 (364)
Q Consensus       150 ~~lP~~~~~~~aa~~~-~~~~a~~~l-~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~  227 (364)
                      +++|+++++++|++++ ++.|||+++ +.+++++|++|||+|+|++|++++|+|+++|++.|++++.+++|.++++++|+
T Consensus       160 ~~iP~~~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlV~GaG~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a~~lGa  239 (378)
T 3uko_A          160 AKIDPTAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSNVAIFGLGTVGLAVAEGAKTAGASRIIGIDIDSKKYETAKKFGV  239 (378)
T ss_dssp             EECCTTSCHHHHGGGGTHHHHHHHHHHTTTCCCTTCCEEEECCSHHHHHHHHHHHHHTCSCEEEECSCTTHHHHHHTTTC
T ss_pred             EECCCCCCHHHhhhhhhhHHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCC
Confidence            9999999999999886 889999988 56899999999999999999999999999999778999999999999999999


Q ss_pred             CeEEecCCCcccHHHHHHHHHHHcCCCccEEEECCCCHHHHHHHHHhcccC-CEEEEEcCCCCC--ccccchhhhhcCcE
Q 017916          228 DNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAG-GKVCLVGMGHHE--MTVPLTPAAVREVD  304 (364)
Q Consensus       228 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~--~~~~~~~~~~~~~~  304 (364)
                      ++++++.+..+++.+.+++++   ++++|++|||+|+++.+..++++|+++ |+++.+|.....  ..+....+. ++++
T Consensus       240 ~~vi~~~~~~~~~~~~i~~~~---~gg~D~vid~~g~~~~~~~~~~~l~~g~G~iv~~G~~~~~~~~~~~~~~~~-~~~~  315 (378)
T 3uko_A          240 NEFVNPKDHDKPIQEVIVDLT---DGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLV-TGRV  315 (378)
T ss_dssp             CEEECGGGCSSCHHHHHHHHT---TSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECSCCCTTCCEEECTHHHH-TTCE
T ss_pred             cEEEccccCchhHHHHHHHhc---CCCCCEEEECCCCHHHHHHHHHHhhccCCEEEEEcccCCCCccccCHHHHh-cCcE
Confidence            999987654578888887764   349999999999888999999999996 999999965432  233333344 4889


Q ss_pred             EEeeccC----CCcHHHHHHHHHcCCCCCCCceEEEeeCChhhHHHHHHHHhcCCCceEEEEeC
Q 017916          305 VVGVFRY----KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  364 (364)
Q Consensus       305 ~~~~~~~----~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  364 (364)
                      +.+....    .+.++++++++++|++.+.+.++++|+|  +++++||+.+++++.. |+|+++
T Consensus       316 i~g~~~~~~~~~~~~~~~~~l~~~g~l~~~~~i~~~~~l--~~~~~A~~~~~~g~~~-Kvvi~~  376 (378)
T 3uko_A          316 WKGTAFGGFKSRTQVPWLVEKYMNKEIKVDEYITHNLTL--GEINKAFDLLHEGTCL-RCVLDT  376 (378)
T ss_dssp             EEECSGGGCCHHHHHHHHHHHHHTTSSCCGGGEEEEEEG--GGHHHHHHHTTCTTCS-EEEEET
T ss_pred             EEEEEecCCCchHHHHHHHHHHHcCCCChhHheeeEeeH--HHHHHHHHHHHCCCce-EEEEec
Confidence            9887643    4678999999999999877889999999  9999999999988765 999875

>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*

Probab=100.00  E-value=5.1e-55  Score=407.55  Aligned_cols=337  Identities=24%  Similarity=0.374  Sum_probs=290.2

Q ss_pred             hcceeEEEecCC-ceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCCCCCC
Q 017916           16 EVNMAAWLLGVN-TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT   94 (364)
Q Consensus        16 ~~~~~~~~~~~~-~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~   94 (364)
                      .+|+++++.++. .+++.+.|.|+++++||+|||++++||++|++.+.|.+.    ..+|.++|||++|+|+++|++|++
T Consensus         8 ~~mka~~~~~~g~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~----~~~P~v~GhE~~G~V~~vG~~v~~   83 (373)
T 1p0f_A            8 ITCKAAVAWEPHKPLSLETITVAPPKAHEVRIKILASGICGSDSSVLKEIIP----SKFPVILGHEAVGVVESIGAGVTC   83 (373)
T ss_dssp             EEEEEEEBSSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHTTSSC----CCSSBCCCCCEEEEEEEECTTCCS
T ss_pred             ceeEEEEEEcCCCCeeEEEeeCCCCCCCeEEEEEeEEeecchhHHHhcCCCC----CCCCcccCcCceEEEEEECCCCCc
Confidence            358898888775 699999999999999999999999999999999887542    457999999999999999999999


Q ss_pred             CCCCCEEEEcCCcCCCCCccccCCCCCCCCCcccc---cc-----------------CCCCCcceeEEEecCCceEECCC
Q 017916           95 LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFF---AT-----------------PPVHGSLANQVVHPADLCFKLPD  154 (364)
Q Consensus        95 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-----------------~~~~g~~~~~v~~~~~~~~~lP~  154 (364)
                      |++||||++.+..+|..|.+|+.++.++|.+....   +.                 ....|+|+||+++++++++++|+
T Consensus        84 ~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~G~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP~  163 (373)
T 1p0f_A           84 VKPGDKVIPLFVPQCGSCRACKSSNSNFCEKNDMGAKTGLMADMTSRFTCRGKPIYNLMGTSTFTEYTVVADIAVAKIDP  163 (373)
T ss_dssp             CCTTCEEEECSSCCCSSSHHHHCTTCCCCTTCSTTTCCCSCTTSCCSEEETTEEEBCSTTTCCSBSEEEEETTSEEEECT
T ss_pred             cCCCCEEEECCCCCCCCChhhcCCCcCcCcCCCcccccccccCCccccccCCcccccccCCccceeEEEEchhhEEECCC
Confidence            99999999999999999999999999999986431   10                 01359999999999999999999


Q ss_pred             CCCccchhhhh-hhHHHHHHH-HHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEe
Q 017916          155 NVSLEEGAMCE-PLSVGLHAC-RRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVK  232 (364)
Q Consensus       155 ~~~~~~aa~~~-~~~~a~~~l-~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~  232 (364)
                      +++++ ||+++ ++.|||+++ +.+++++|++|||+|+|++|++++|+|+++|++.|++++.+++|.++++++|++++++
T Consensus       164 ~l~~~-aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~  242 (373)
T 1p0f_A          164 KAPLE-SCLIGCGFATGYGAAVNTAKVTPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIELGATECLN  242 (373)
T ss_dssp             TCCGG-GGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHTTCSEEEC
T ss_pred             CCChh-hhhhhhHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCcEEEe
Confidence            99999 88876 889999988 5689999999999999999999999999999977899999999999999999999988


Q ss_pred             cCCCcccHHHHHHHHHHHcCCCccEEEECCCCHHHHHHHHHhcccC-CEEEEEcCCCC--CccccchhhhhcCcEEEeec
Q 017916          233 VSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAG-GKVCLVGMGHH--EMTVPLTPAAVREVDVVGVF  309 (364)
Q Consensus       233 ~~~~~~~~~~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~--~~~~~~~~~~~~~~~~~~~~  309 (364)
                      +.+..+++.+.+++++   ++++|++|||+|.++.+..++++|+++ |+++.+|....  ...++...+..++ ++.+..
T Consensus       243 ~~~~~~~~~~~i~~~t---~gg~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~-~i~g~~  318 (373)
T 1p0f_A          243 PKDYDKPIYEVICEKT---NGGVDYAVECAGRIETMMNALQSTYCGSGVTVVLGLASPNERLPLDPLLLLTGR-SLKGSV  318 (373)
T ss_dssp             GGGCSSCHHHHHHHHT---TSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECCCCCTTCCEEECTHHHHTTC-EEEECS
T ss_pred             cccccchHHHHHHHHh---CCCCCEEEECCCCHHHHHHHHHHHhcCCCEEEEEccCCCCCccccCHHHhccCc-eEEeec
Confidence            7543356777777664   348999999999878999999999999 99999986543  2344445566677 888875


Q ss_pred             cC---CCcHHHHHHHHHcCCCCCCCceEEEeeCChhhHHHHHHHHhcCCCceEEEEeC
Q 017916          310 RY---KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  364 (364)
Q Consensus       310 ~~---~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  364 (364)
                      ..   .+.++++++++++|++.+.+.+.++|+|  +++++|++.++++.. +|+++++
T Consensus       319 ~~~~~~~~~~~~~~l~~~g~i~~~~~i~~~~~l--~~~~~A~~~~~~~~~-~kvvi~~  373 (373)
T 1p0f_A          319 FGGFKGEEVSRLVDDYMKKKINVNFLVSTKLTL--DQINKAFELLSSGQG-VRSIMIY  373 (373)
T ss_dssp             GGGCCGGGHHHHHHHHHTTSSCGGGGEEEEECG--GGHHHHHHHTTTSSC-SEEEEEC
T ss_pred             cCCcCHHHHHHHHHHHHcCCCCchheEEEEeeH--HHHHHHHHHHHCCCc-ceEEEeC
Confidence            43   3689999999999999766788999999  999999999988764 7999875

>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*

Probab=100.00  E-value=4.6e-56  Score=410.00  Aligned_cols=336  Identities=32%  Similarity=0.568  Sum_probs=296.3

Q ss_pred             ceeEEEecCCc-eEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCCCCCCCC
Q 017916           18 NMAAWLLGVNT-LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLV   96 (364)
Q Consensus        18 ~~~~~~~~~~~-~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~   96 (364)
                      |+++++.++.. +++.+.|.|+++++||+|||+++++|++|++.+.|.+.......+|.++|||++|+|+++|++|++|+
T Consensus         1 Mka~~~~~~g~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~v~G~E~~G~V~~vG~~v~~~~   80 (343)
T 2dq4_A            1 MRALAKLAPEEGLTLVDRPVPEPGPGEILVRVEAASICGTDLHIWKWDAWARGRIRPPLVTGHEFSGVVEAVGPGVRRPQ   80 (343)
T ss_dssp             CEEEEECSSSSSCEEEECCCCCCCTTEEEEEEEEEECCHHHHHHHTTCHHHHHHCCSSEECCCEEEEEEEEECTTCCSSC
T ss_pred             CeEEEEeCCCCcEEEEeccCCCCCCCEEEEEEEEEeechhhHHHHcCCCCccccCCCCCcCCccceEEEEEECCCCCcCC
Confidence            57888887665 99999999999999999999999999999999887532101246799999999999999999999999


Q ss_pred             CCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCccchhhhhhhHHHHHHHH-
Q 017916           97 PGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACR-  175 (364)
Q Consensus        97 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~lP~~~~~~~aa~~~~~~~a~~~l~-  175 (364)
                      +||||++.+..+|..|.+|+.++.++|.+..+.+. ..+|+|+||+++++++++++|+++++++|+++.++++||++++ 
T Consensus        81 vGdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~-~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~~~~~~ta~~~l~~  159 (343)
T 2dq4_A           81 VGDHVSLESHIVCHACPACRTGNYHVCLNTQILGV-DRDGGFAEYVVVPAENAWVNPKDLPFEVAAILEPFGNAVHTVYA  159 (343)
T ss_dssp             TTCEEEECCEECCSCSHHHHTTCGGGCTTCEEBTT-TBCCSSBSEEEEEGGGEEEECTTSCHHHHTTHHHHHHHHHHHHS
T ss_pred             CCCEEEECCCCCCCCChhhhCcCcccCCCcceecC-CCCCcceeEEEEchHHeEECCCCCCHHHHHhhhHHHHHHHHHHH
Confidence            99999999999999999999999999999876653 4679999999999999999999999999998888899999997 


Q ss_pred             HcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcCCCc
Q 017916          176 RANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGI  255 (364)
Q Consensus       176 ~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~  255 (364)
                      .+++ +|++|||+|+|++|++++|+|+.+|++.|+++++++++.++++++ ++.++++..  +++.+.+++++   +.++
T Consensus       160 ~~~~-~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~l-a~~v~~~~~--~~~~~~~~~~~---~~g~  232 (343)
T 2dq4_A          160 GSGV-SGKSVLITGAGPIGLMAAMVVRASGAGPILVSDPNPYRLAFARPY-ADRLVNPLE--EDLLEVVRRVT---GSGV  232 (343)
T ss_dssp             TTCC-TTSCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHGGGTTT-CSEEECTTT--SCHHHHHHHHH---SSCE
T ss_pred             hCCC-CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh-HHhccCcCc--cCHHHHHHHhc---CCCC
Confidence            7899 999999999999999999999999995688888899999999999 998887653  57777777654   6689


Q ss_pred             cEEEECCCCHHHHHHHHHhcccCCEEEEEcCCCCCccccc-hhhhhcCcEEEeeccC--CCcHHHHHHHHHcCCCCCCCc
Q 017916          256 DVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPL-TPAAVREVDVVGVFRY--KNTWPLCLELLRSGKIDVKPL  332 (364)
Q Consensus       256 d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~g~~~~~~~  332 (364)
                      |++||++|..+.++.++++|+++|+++.+|.......++. ..++.+++++.+....  .+.++++++++++|++++++.
T Consensus       233 D~vid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~l~~~g~~~~~~~  312 (343)
T 2dq4_A          233 EVLLEFSGNEAAIHQGLMALIPGGEARILGIPSDPIRFDLAGELVMRGITAFGIAGRRLWQTWMQGTALVYSGRVDLSPL  312 (343)
T ss_dssp             EEEEECSCCHHHHHHHHHHEEEEEEEEECCCCSSCEEECHHHHTGGGTCEEEECCSCCTTHHHHHHHHHHHHTSSCCGGG
T ss_pred             CEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCCCceeCcHHHHHhCceEEEEeecCCCHHHHHHHHHHHHcCCCChHHh
Confidence            9999999987889999999999999999987554445555 6678899999998654  667999999999999877888


Q ss_pred             eEEEeeCChhhHHHHHHHHhcCCCceEEEEeC
Q 017916          333 VTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  364 (364)
Q Consensus       333 ~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  364 (364)
                      ++++|+|  +++++|++.++++.. ||+|+++
T Consensus       313 i~~~~~l--~~~~~A~~~~~~~~~-gKvv~~~  341 (343)
T 2dq4_A          313 LTHRLPL--SRYREAFGLLASGQA-VKVILDP  341 (343)
T ss_dssp             EEEEEEG--GGHHHHHHHHHHSSC-SEEEEET
T ss_pred             eeEEecH--HHHHHHHHHHhcCCc-eEEEEee
Confidence            9999999  999999999998877 9999975

>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*

Probab=100.00  E-value=4e-55  Score=408.64  Aligned_cols=339  Identities=26%  Similarity=0.436  Sum_probs=292.1

Q ss_pred             hhcceeEEEecCC-ceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCCCCC
Q 017916           15 EEVNMAAWLLGVN-TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVK   93 (364)
Q Consensus        15 ~~~~~~~~~~~~~-~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~   93 (364)
                      +.+|+++++.++. .+++.+.|.|+++++||+|||++++||++|++.+.|. .   ...+|.++|||++|+|+++|++|+
T Consensus         6 p~~mka~~~~~~g~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~-~---~~~~P~v~GhE~~G~V~~vG~~v~   81 (376)
T 1e3i_A            6 VIKCKAAIAWKTGSPLCIEEIEVSPPKACEVRIQVIATCVCPTDINATDPK-K---KALFPVVLGHECAGIVESVGPGVT   81 (376)
T ss_dssp             CEEEEEEEBCSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHTTCTT-S---CCCSSBCCCCEEEEEEEEECTTCC
T ss_pred             ChheeEEEEecCCCCeEEEEeeCCCCCCCeEEEEEeEEeEchhhHHHhcCC-C---CCCCCcccCccccEEEEEECCCCc
Confidence            3458899888775 6999999999999999999999999999999988774 1   246799999999999999999999


Q ss_pred             CCCCCCEEEEcCCcCCCCCccccCCCCCCCCCcc----c---cccC-----------------CCCCcceeEEEecCCce
Q 017916           94 TLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMK----F---FATP-----------------PVHGSLANQVVHPADLC  149 (364)
Q Consensus        94 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~----~---~~~~-----------------~~~g~~~~~v~~~~~~~  149 (364)
                      +|++||||++.+..+|..|.+|+.++.++|.+..    +   .+..                 ...|+|+||++++++++
T Consensus        82 ~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~G~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~  161 (376)
T 1e3i_A           82 NFKPGDKVIPFFAPQCKRCKLCLSPLTNLCGKLRNFKYPTIDQELMEDRTSRFTCKGRSIYHFMGVSSFSQYTVVSEANL  161 (376)
T ss_dssp             SCCTTCEEEECSSCCCSSSHHHHCTTCCCCTTCCCSSCGGGSSCSCTTSCCSEEETTEEEBCCTTTCCSBSEEEEEGGGE
T ss_pred             cCCCCCEEEECCcCCCCCCccccCCCcccCcCcCccccccccccccccCccccccCCcccccccCCccceeEEEeccccE
Confidence            9999999999999999999999999999999754    1   0110                 12499999999999999


Q ss_pred             EECCCCCCccchhhhh-hhHHHHHHH-HHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCC
Q 017916          150 FKLPDNVSLEEGAMCE-PLSVGLHAC-RRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGA  227 (364)
Q Consensus       150 ~~lP~~~~~~~aa~~~-~~~~a~~~l-~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~  227 (364)
                      +++|+++++++|++++ ++.|||+++ +.+++++|++|||+|+|++|++++|+|+++|++.|++++.+++|.++++++|+
T Consensus       162 ~~iP~~l~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa  241 (376)
T 1e3i_A          162 ARVDDEANLERVCLIGCGFSSGYGAAINTAKVTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKALGA  241 (376)
T ss_dssp             EECCTTCCHHHHGGGGTHHHHHHHHHHTTSCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTC
T ss_pred             EECCCCCCHHHhhhhccHHHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCC
Confidence            9999999999999886 789999988 56899999999999999999999999999999778999999999999999999


Q ss_pred             CeEEecCCCcccHHHHHHHHHHHcCCCccEEEECCCCHHHHHHHHHhcccC-CEEEEEcCCCCCccccchhhhhcCcEEE
Q 017916          228 DNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAG-GKVCLVGMGHHEMTVPLTPAAVREVDVV  306 (364)
Q Consensus       228 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~  306 (364)
                      ++++++.+..+++.+.+++++   ++++|++|||+|.++.++.++++|+++ |+++.+|.......++...+..++ ++.
T Consensus       242 ~~vi~~~~~~~~~~~~v~~~~---~~g~Dvvid~~G~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~-~i~  317 (376)
T 1e3i_A          242 TDCLNPRELDKPVQDVITELT---AGGVDYSLDCAGTAQTLKAAVDCTVLGWGSCTVVGAKVDEMTIPTVDVILGR-SIN  317 (376)
T ss_dssp             SEEECGGGCSSCHHHHHHHHH---TSCBSEEEESSCCHHHHHHHHHTBCTTTCEEEECCCSSSEEEEEHHHHHTTC-EEE
T ss_pred             cEEEccccccchHHHHHHHHh---CCCccEEEECCCCHHHHHHHHHHhhcCCCEEEEECCCCCccccCHHHhhccC-eEE
Confidence            999887543356777777765   348999999999878899999999999 999999874433444555566777 888


Q ss_pred             eeccC----CCcHHHHHHHHHcCCCCCCCceEEEeeCChhhHHHHHHHHhcCCCceEEEEeC
Q 017916          307 GVFRY----KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  364 (364)
Q Consensus       307 ~~~~~----~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  364 (364)
                      +....    .+.++++++++++|++.+.+.++++|+|  +++++|++.++++. .+|+++++
T Consensus       318 g~~~~~~~~~~~~~~~~~l~~~g~i~~~~~i~~~~~l--~~~~~A~~~~~~~~-~~Kvvi~~  376 (376)
T 1e3i_A          318 GTFFGGWKSVDSVPNLVSDYKNKKFDLDLLVTHALPF--ESINDAIDLMKEGK-SIRTILTF  376 (376)
T ss_dssp             ECSGGGCCHHHHHHHHHHHHHTTSSCGGGGEEEEEEG--GGHHHHHHHHHTTC-CSEEEEEC
T ss_pred             EEecCCCCcHHHHHHHHHHHHcCCCCcHHhEeeeecH--HHHHHHHHHHhcCC-cceEEEeC
Confidence            87643    4578999999999999766788999999  99999999998876 57999875

>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*

Probab=100.00  E-value=5.5e-55  Score=402.42  Aligned_cols=332  Identities=27%  Similarity=0.400  Sum_probs=295.6

Q ss_pred             ceeEEEecC-CceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCCCCCCCC
Q 017916           18 NMAAWLLGV-NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLV   96 (364)
Q Consensus        18 ~~~~~~~~~-~~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~   96 (364)
                      |+++++.++ .++++.+.|.|+++++||+|||+++++|++|++.+.|.+..  ...+|.++|||++|+|+++|+++++|+
T Consensus         3 MkA~~~~~~g~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~--~~~~P~v~G~E~~G~V~~vG~~v~~~~   80 (340)
T 3s2e_A            3 MKAAVVRAFGAPLTIDEVPVPQPGPGQVQVKIEASGVCHTDLHAADGDWPV--KPTLPFIPGHEGVGYVSAVGSGVSRVK   80 (340)
T ss_dssp             EEEEEBCSTTSCCEEEEEECCCCCTTCEEEEEEEEEECHHHHHHHHTCSSS--CCCSSBCCCSEEEEEEEEECSSCCSCC
T ss_pred             eEEEEEecCCCCCEEEEccCCCCCCCeEEEEEEEeccCHHHHHHHcCCCCC--CCCCCcccCCcceEEEEEECCCCCcCC
Confidence            778888764 57999999999999999999999999999999999886532  246899999999999999999999999


Q ss_pred             CCCEE-EEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCccchhhhh-hhHHHHHHH
Q 017916           97 PGDRV-ALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHAC  174 (364)
Q Consensus        97 ~Gd~V-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~lP~~~~~~~aa~~~-~~~~a~~~l  174 (364)
                      +||+| +..+..+|..|.+|..++.++|.+....+. ..+|+|+||+++++++++++|+++++++|+.++ .+.|||+++
T Consensus        81 vGdrV~~~~~~~~cg~C~~c~~g~~~~c~~~~~~g~-~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l  159 (340)
T 3s2e_A           81 EGDRVGVPWLYSACGYCEHCLQGWETLCEKQQNTGY-SVNGGYGEYVVADPNYVGLLPDKVGFVEIAPILCAGVTVYKGL  159 (340)
T ss_dssp             TTCEEEEESEEECCSSSHHHHTTCGGGCTTCEEBTT-TBCCSSBSEEEECTTTSEECCTTSCHHHHGGGGTHHHHHHHHH
T ss_pred             CCCEEEecCCCCCCCCChHHhCcCcccCccccccCC-CCCCcceeEEEechHHEEECCCCCCHHHhhcccchhHHHHHHH
Confidence            99999 556778899999999999999999887664 578999999999999999999999999999665 888999999


Q ss_pred             HHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcCCC
Q 017916          175 RRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTG  254 (364)
Q Consensus       175 ~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~  254 (364)
                      +..++++|++|||+|+|++|++++|+|+.+|+ .|++++.+++|.++++++|++.++++.+  +++.+.+++ .  .+ +
T Consensus       160 ~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~~~lGa~~~i~~~~--~~~~~~~~~-~--~g-~  232 (340)
T 3s2e_A          160 KVTDTRPGQWVVISGIGGLGHVAVQYARAMGL-RVAAVDIDDAKLNLARRLGAEVAVNARD--TDPAAWLQK-E--IG-G  232 (340)
T ss_dssp             HTTTCCTTSEEEEECCSTTHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTTCSEEEETTT--SCHHHHHHH-H--HS-S
T ss_pred             HHcCCCCCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHcCCCEEEeCCC--cCHHHHHHH-h--CC-C
Confidence            88999999999999999999999999999999 7899999999999999999999988654  577777766 2  24 8


Q ss_pred             ccEEEECCCCHHHHHHHHHhcccCCEEEEEcCCCCCccccchhhhhcCcEEEeeccC-CCcHHHHHHHHHcCCCCCCCce
Q 017916          255 IDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY-KNTWPLCLELLRSGKIDVKPLV  333 (364)
Q Consensus       255 ~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~g~~~~~~~~  333 (364)
                      +|++||++|+++.++.++++|+++|+++.+|........+...+..+++++.+.... .+.++++++++++|++  ++. 
T Consensus       233 ~d~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g~l--~~~-  309 (340)
T 3s2e_A          233 AHGVLVTAVSPKAFSQAIGMVRRGGTIALNGLPPGDFGTPIFDVVLKGITIRGSIVGTRSDLQESLDFAAHGDV--KAT-  309 (340)
T ss_dssp             EEEEEESSCCHHHHHHHHHHEEEEEEEEECSCCSSEEEEEHHHHHHTTCEEEECCSCCHHHHHHHHHHHHTTSC--CCC-
T ss_pred             CCEEEEeCCCHHHHHHHHHHhccCCEEEEeCCCCCCCCCCHHHHHhCCeEEEEEecCCHHHHHHHHHHHHhCCC--Cce-
Confidence            999999999899999999999999999999976655566667788899999998776 5789999999999999  444 


Q ss_pred             EEEeeCChhhHHHHHHHHhcCCCceEEEEeC
Q 017916          334 THRFGFSQKEVEEAFETSARGGTAIKVMFNL  364 (364)
Q Consensus       334 ~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  364 (364)
                      .+.|+|  +++++|++.++++...||+|+++
T Consensus       310 ~~~~~l--~~~~~A~~~~~~~~~~Gkvvv~~  338 (340)
T 3s2e_A          310 VSTAKL--DDVNDVFGRLREGKVEGRVVLDF  338 (340)
T ss_dssp             EEEECG--GGHHHHHHHHHTTCCCSEEEEEC
T ss_pred             EEEEeH--HHHHHHHHHHHcCCCceEEEEec
Confidence            467888  99999999999999999999975

>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=1.7e-55  Score=408.41  Aligned_cols=335  Identities=25%  Similarity=0.411  Sum_probs=288.7

Q ss_pred             hhcceeEEEecCC-ceEEEEecCCC-CCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCCCC
Q 017916           15 EEVNMAAWLLGVN-TLKIQPFELPS-LGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEV   92 (364)
Q Consensus        15 ~~~~~~~~~~~~~-~~~~~~~~~p~-~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v   92 (364)
                      +.+|+++++.++. .+++.+.|.|+ ++++||+|||+++++|++|++.+.|.+.......+|.++|||++|+|+++|++|
T Consensus        13 ~~~mka~~~~~~g~~l~~~~~p~P~~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~v~G~E~~G~V~~vG~~v   92 (359)
T 1h2b_A           13 VERLKAARLHEYNKPLRIEDVDYPRLEGRFDVIVRIAGAGVCHTDLHLVQGMWHELLQPKLPYTLGHENVGYIEEVAEGV   92 (359)
T ss_dssp             ----CEEEESSTTSCCEEECCCCCCCBTTBCEEEEEEEEECCHHHHHHHHTTTHHHHCCCSSEECCCCEEEEEEEECTTC
T ss_pred             hhhceEEEEecCCCCcEEEEccCCCCCCCCEEEEEEEEEEecccchHHHhCCCccccCCCCCeecCcCceEEEEEECCCC
Confidence            4568899998774 79999999999 999999999999999999999988754210123679999999999999999999


Q ss_pred             CCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCccchh---hhh-hhH
Q 017916           93 KTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGA---MCE-PLS  168 (364)
Q Consensus        93 ~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~lP~~~~~~~aa---~~~-~~~  168 (364)
                      ++|++||+|++.+..+|..|.+|+.++.++|++....+. ..+|+|+||+++++++++++|+++++++|+   .+. .+.
T Consensus        93 ~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~G~-~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~~~~l~~~~~  171 (359)
T 1h2b_A           93 EGLEKGDPVILHPAVTDGTCLACRAGEDMHCENLEFPGL-NIDGGFAEFMRTSHRSVIKLPKDISREKLVEMAPLADAGI  171 (359)
T ss_dssp             CSCCTTCEEEECSCBCCSCSHHHHTTCGGGCTTCBCBTT-TBCCSSBSEEEECGGGEEECCTTCCHHHHHHTGGGGTHHH
T ss_pred             CCCCCCCEEEeCCCCCCCCChhhhCcCcccCCCcccccc-CCCCcccceEEechHhEEECCCCCCHHHHhhccchhhhHH
Confidence            999999999999889999999999999999998876653 567999999999999999999999999988   443 677


Q ss_pred             HHHHHHHH--cCCCCCCEEEEEcCCHHHHHHHHHHHHC-CCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHH
Q 017916          169 VGLHACRR--ANIGPETNVLIMGAGPIGLVTMLGARAF-GAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVE  245 (364)
Q Consensus       169 ~a~~~l~~--~~~~~g~~VLI~Gag~~G~~ai~la~~~-g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~  245 (364)
                      |||++++.  +++++|++|||+|+|++|++++|+|+++ |+ .|++++++++|.++++++|+++++++.+  + +.+.++
T Consensus       172 ta~~al~~~~~~~~~g~~VlV~GaG~vG~~avqlak~~~Ga-~Vi~~~~~~~~~~~~~~lGa~~vi~~~~--~-~~~~v~  247 (359)
T 1h2b_A          172 TAYRAVKKAARTLYPGAYVAIVGVGGLGHIAVQLLKVMTPA-TVIALDVKEEKLKLAERLGADHVVDARR--D-PVKQVM  247 (359)
T ss_dssp             HHHHHHHHHHTTCCTTCEEEEECCSHHHHHHHHHHHHHCCC-EEEEEESSHHHHHHHHHTTCSEEEETTS--C-HHHHHH
T ss_pred             HHHHHHHhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCC-eEEEEeCCHHHHHHHHHhCCCEEEeccc--h-HHHHHH
Confidence            89999977  8999999999999999999999999999 99 6899989999999999999999998653  3 667776


Q ss_pred             HHHHHcCCCccEEEECCCCHH--HHHHHHHhcccCCEEEEEcCCCCCccccchhhhhcCcEEEeeccC-CCcHHHHHHHH
Q 017916          246 KIQKAMGTGIDVSFDCAGFNK--TMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY-KNTWPLCLELL  322 (364)
Q Consensus       246 ~~~~~~~~~~d~vid~~g~~~--~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l  322 (364)
                      +++.  +.++|++||++|++.  .+..++++  ++|+++.+|..... .++...++.+++++.+.... .+.++++++++
T Consensus       248 ~~~~--g~g~Dvvid~~G~~~~~~~~~~~~~--~~G~~v~~g~~~~~-~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~  322 (359)
T 1h2b_A          248 ELTR--GRGVNVAMDFVGSQATVDYTPYLLG--RMGRLIIVGYGGEL-RFPTIRVISSEVSFEGSLVGNYVELHELVTLA  322 (359)
T ss_dssp             HHTT--TCCEEEEEESSCCHHHHHHGGGGEE--EEEEEEECCCSSCC-CCCHHHHHHTTCEEEECCSCCHHHHHHHHHHH
T ss_pred             HHhC--CCCCcEEEECCCCchHHHHHHHhhc--CCCEEEEEeCCCCC-CCCHHHHHhCCcEEEEecCCCHHHHHHHHHHH
Confidence            6542  458999999999776  78888887  89999999865444 55555678899999998765 56799999999


Q ss_pred             HcCCCCCCCceEEEeeCChhhHHHHHHHHhcCCCceEEEEeC
Q 017916          323 RSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  364 (364)
Q Consensus       323 ~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  364 (364)
                      ++|++  ++.+ ++|+|  +++++|++.++++...||+|+++
T Consensus       323 ~~g~l--~~~i-~~~~l--~~~~~A~~~~~~~~~~gKvvv~~  359 (359)
T 1h2b_A          323 LQGKV--RVEV-DIHKL--DEINDVLERLEKGEVLGRAVLIP  359 (359)
T ss_dssp             HTTSC--CCCE-EEEEG--GGHHHHHHHHHTTCCSSEEEEEC
T ss_pred             HcCCC--cceE-EEEeH--HHHHHHHHHHHcCCCceEEEeeC
Confidence            99998  5667 99999  99999999999998899999975

>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=1.2e-54  Score=405.18  Aligned_cols=339  Identities=24%  Similarity=0.390  Sum_probs=291.5

Q ss_pred             hhcceeEEEecCC-ceEEEEecCCCCCCCcEEEEEeeeeeCcccHh-hhhhcccCCccCCCCcccccceeEEEEEeCCCC
Q 017916           15 EEVNMAAWLLGVN-TLKIQPFELPSLGPYDVLVRMKAVGICGSDVH-YLKTLRCADFVVKEPMVIGHECAGVIEKVGSEV   92 (364)
Q Consensus        15 ~~~~~~~~~~~~~-~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~-~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v   92 (364)
                      +.+|+++++.++. .+++.+.|.|+++++||+|||++++||++|++ .+.|.+.    ..+|.++|||++|+|+++|++|
T Consensus         6 ~~~mka~~~~~~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~~g~~~----~~~P~v~GhE~~G~V~~vG~~V   81 (374)
T 1cdo_A            6 VIKCKAAVAWEANKPLVIEEIEVDVPHANEIRIKIIATGVCHTDLYHLFEGKHK----DGFPVVLGHEGAGIVESVGPGV   81 (374)
T ss_dssp             CEEEEEEEBCSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHHTTCCT----TSCSEECCCCEEEEEEEECTTC
T ss_pred             cceeEEEEEecCCCCeEEEEeeCCCCCCCEEEEEEeEEeechhhHHHHhCCCCC----CCCCcccCccceEEEEEECCCC
Confidence            3458888888764 69999999999999999999999999999999 7877432    4679999999999999999999


Q ss_pred             CCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCcccc---cc--C---------------CCCCcceeEEEecCCceEEC
Q 017916           93 KTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFF---AT--P---------------PVHGSLANQVVHPADLCFKL  152 (364)
Q Consensus        93 ~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~--~---------------~~~g~~~~~v~~~~~~~~~l  152 (364)
                      ++|++||||++.+..+|..|.+|+.++.++|.+....   +.  .               ...|+|+||+++++++++++
T Consensus        82 ~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~G~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~~  161 (374)
T 1cdo_A           82 TEFQPGEKVIPLFISQCGECRFCQSPKTNQCVKGWANESPDVMSPKETRFTCKGRKVLQFLGTSTFSQYTVVNQIAVAKI  161 (374)
T ss_dssp             CSCCTTCEEEECSSCCCSSSHHHHCTTCCCCSCSGGGTCTTTTSCSCCCEEETTEEEEEGGGTCCSBSEEEEEGGGEEEC
T ss_pred             ccCCCCCEEEeCCCCCCCCChhhcCCCcCcCCCcccccccccccCCccccccCCcccccccCCccceeEEEEchhheEEC
Confidence            9999999999999999999999999999999976431   10  0               12599999999999999999


Q ss_pred             CCCCCccchhhhh-hhHHHHHHH-HHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeE
Q 017916          153 PDNVSLEEGAMCE-PLSVGLHAC-RRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNI  230 (364)
Q Consensus       153 P~~~~~~~aa~~~-~~~~a~~~l-~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~  230 (364)
                      |+++++++||+++ ++.|||+++ +.+++++|++|||+|+|++|++++|+|+.+|++.|++++.++++.++++++|++++
T Consensus       162 P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~v  241 (374)
T 1cdo_A          162 DPSAPLDTVCLLGCGVSTGFGAAVNTAKVEPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVFGATDF  241 (374)
T ss_dssp             CTTCCHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCCEE
T ss_pred             CCCCCHHHHhhhccHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhCCceE
Confidence            9999999999886 889999988 56899999999999999999999999999999778999899999999999999998


Q ss_pred             EecCCCcccHHHHHHHHHHHcCCCccEEEECCCCHHHHHHHHHhcccC-CEEEEEcCCCC-CccccchhhhhcCcEEEee
Q 017916          231 VKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAG-GKVCLVGMGHH-EMTVPLTPAAVREVDVVGV  308 (364)
Q Consensus       231 ~~~~~~~~~~~~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~  308 (364)
                      +++.+..+++.+.++++.   ++++|++||++|.++.+..++++|+++ |+++.+|.... ...++...+..++ ++.+.
T Consensus       242 i~~~~~~~~~~~~~~~~~---~~g~D~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~-~i~g~  317 (374)
T 1cdo_A          242 VNPNDHSEPISQVLSKMT---NGGVDFSLECVGNVGVMRNALESCLKGWGVSVLVGWTDLHDVATRPIQLIAGR-TWKGS  317 (374)
T ss_dssp             ECGGGCSSCHHHHHHHHH---TSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECSCCSSSCEEECHHHHHTTC-EEEEC
T ss_pred             EeccccchhHHHHHHHHh---CCCCCEEEECCCCHHHHHHHHHHhhcCCcEEEEEcCCCCCCcccCHHHHhcCC-eEEEE
Confidence            887543356777777765   348999999999878899999999999 99999986543 3334444566677 88887


Q ss_pred             ccC----CCcHHHHHHHHHcCCCCCCCceEEEeeCChhhHHHHHHHHhcCCCceEEEEeC
Q 017916          309 FRY----KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  364 (364)
Q Consensus       309 ~~~----~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  364 (364)
                      ...    .+.++++++++++|++.+.+.+.+.|+|  +++++|++.+++++. +|+++++
T Consensus       318 ~~~~~~~~~~~~~~~~l~~~g~l~~~~~i~~~~~l--~~~~~A~~~~~~~~~-~kvvi~~  374 (374)
T 1cdo_A          318 MFGGFKGKDGVPKMVKAYLDKKVKLDEFITHRMPL--ESVNDAIDLMKHGKC-IRTVLSL  374 (374)
T ss_dssp             SGGGCCHHHHHHHHHHHHHTTSSCCGGGEEEEEEG--GGHHHHHHHHHTTCC-SEEEEEC
T ss_pred             ecCCCCcHHHHHHHHHHHHcCCCChHHheeeEecH--HHHHHHHHHHHCCCe-eEEEEeC
Confidence            543    4578999999999999766788999999  999999999998864 7999875

>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...

Probab=100.00  E-value=1.6e-54  Score=404.37  Aligned_cols=338  Identities=26%  Similarity=0.407  Sum_probs=291.0

Q ss_pred             hcceeEEEecCC-ceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCCCCCC
Q 017916           16 EVNMAAWLLGVN-TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT   94 (364)
Q Consensus        16 ~~~~~~~~~~~~-~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~   94 (364)
                      .+|+++++.++. .+++.+.|.|+++++||+|||++++||++|++.+.|.+.    ..+|.++|||++|+|+++|++|++
T Consensus         7 ~~mkA~~~~~~g~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~----~~~P~v~GhE~~G~V~~vG~~v~~   82 (374)
T 2jhf_A            7 IKCKAAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTLV----TPLPVIAGHEAAGIVESIGEGVTT   82 (374)
T ss_dssp             EEEEEEEBCSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHHTSSC----CCSSBCCCCSEEEEEEEECTTCCS
T ss_pred             eeEEEEEEecCCCceEEEEccCCCCCCCeEEEEEeEEeechhhHHHHcCCCC----CCCCcccCcCceEEEEEECCCCCC
Confidence            357888888764 699999999999999999999999999999999887542    237999999999999999999999


Q ss_pred             CCCCCEEEEcCCcCCCCCccccCCCCCCCCCcccc---cc-----------------CCCCCcceeEEEecCCceEECCC
Q 017916           95 LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFF---AT-----------------PPVHGSLANQVVHPADLCFKLPD  154 (364)
Q Consensus        95 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-----------------~~~~g~~~~~v~~~~~~~~~lP~  154 (364)
                      |++||||++.+..+|..|.+|+.++.++|.+....   +.                 ....|+|+||+++++++++++|+
T Consensus        83 ~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~g~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP~  162 (374)
T 2jhf_A           83 VRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDA  162 (374)
T ss_dssp             CCTTCEEEECSSCCCSCSHHHHSTTCCCCTTCSSSSCCCSCTTSCCSEEETTEEEBCSTTTCCSBSEEEEEGGGEEECCT
T ss_pred             CCCCCEEEECCCCCCCCCccccCCCcCcCCCCccccccccccCCcccccccccccccccCCccCeeEEEEchHHeEECCC
Confidence            99999999999999999999999999999986531   11                 01359999999999999999999


Q ss_pred             CCCccchhhhh-hhHHHHHHH-HHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEe
Q 017916          155 NVSLEEGAMCE-PLSVGLHAC-RRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVK  232 (364)
Q Consensus       155 ~~~~~~aa~~~-~~~~a~~~l-~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~  232 (364)
                      ++++++|++++ ++.|||+++ +.+++++|++|||+|+|++|++++|+|+.+|++.|+++++++++.++++++|++++++
T Consensus       163 ~l~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~  242 (374)
T 2jhf_A          163 ASPLEKVCLIGCGFSTGYGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVN  242 (374)
T ss_dssp             TCCHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEEEC
T ss_pred             CCCHHHhhhhccHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCceEec
Confidence            99999999886 789999998 5689999999999999999999999999999977899989999999999999999988


Q ss_pred             cCCCcccHHHHHHHHHHHcCCCccEEEECCCCHHHHHHHHHhcccC-CEEEEEcCCCC--CccccchhhhhcCcEEEeec
Q 017916          233 VSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAG-GKVCLVGMGHH--EMTVPLTPAAVREVDVVGVF  309 (364)
Q Consensus       233 ~~~~~~~~~~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~--~~~~~~~~~~~~~~~~~~~~  309 (364)
                      +.+..+++.+.++++.   ++++|++||++|.++.+..++++|+++ |+++.+|....  ...++...++.++ ++.+.+
T Consensus       243 ~~~~~~~~~~~~~~~~---~~g~D~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~-~i~g~~  318 (374)
T 2jhf_A          243 PQDYKKPIQEVLTEMS---NGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDSQNLSMNPMLLLSGR-TWKGAI  318 (374)
T ss_dssp             GGGCSSCHHHHHHHHT---TSCBSEEEECSCCHHHHHHHHHHBCTTTCEEEECSCCCTTCCEEECTHHHHTTC-EEEECS
T ss_pred             ccccchhHHHHHHHHh---CCCCcEEEECCCCHHHHHHHHHHhhcCCcEEEEeccCCCCCccccCHHHHhcCC-eEEEec
Confidence            7543356777776654   348999999999888999999999999 99999986443  2344555566777 888876


Q ss_pred             cC----CCcHHHHHHHHHcCCCCCCCceEEEeeCChhhHHHHHHHHhcCCCceEEEEeC
Q 017916          310 RY----KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  364 (364)
Q Consensus       310 ~~----~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  364 (364)
                      ..    .+.++++++++++|++.+.+.+++.|+|  +++++|++.++++.. +|+++++
T Consensus       319 ~~~~~~~~~~~~~~~l~~~g~i~~~~~i~~~~~l--~~~~~A~~~~~~~~~-~Kvvi~~  374 (374)
T 2jhf_A          319 FGGFKSKDSVPKLVADFMAKKFALDPLITHVLPF--EKINEGFDLLRSGES-IRTILTF  374 (374)
T ss_dssp             GGGCCHHHHHHHHHHHHHTTSSCCGGGEEEEEEG--GGHHHHHHHHHTTCC-SEEEEEC
T ss_pred             cCCCChHHHHHHHHHHHHcCCCCchhheEEEEeH--HHHHHHHHHHHCCCc-ceEEEeC
Confidence            43    4578999999999999777788999999  999999999988764 7999875

>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*

Probab=100.00  E-value=6.4e-55  Score=402.78  Aligned_cols=334  Identities=25%  Similarity=0.397  Sum_probs=291.1

Q ss_pred             ceeEEEecCCc-eEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCCCCCCCC
Q 017916           18 NMAAWLLGVNT-LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLV   96 (364)
Q Consensus        18 ~~~~~~~~~~~-~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~   96 (364)
                      |+++++.++.. +++.+.|.|+++++||+|||+++++|++|++.+.|.+. .....+|.++|||++|+|+++|++|++|+
T Consensus         1 MkA~~~~~~g~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~-~~~~~~p~i~G~e~~G~V~~vG~~v~~~~   79 (345)
T 3jv7_A            1 MKAVQYTEIGSEPVVVDIPTPTPGPGEILLKVTAAGLCHSDIFVMDMPAA-QYAYGLPLTLGHEGVGTVAELGEGVTGFG   79 (345)
T ss_dssp             CEEEEECSTTSCCEEEECCCCCCCTTCEEEEEEEEECCHHHHHHHHSCTT-TCCSCSSEECCSEEEEEEEEECTTCCSCC
T ss_pred             CeEEEEcCCCCceEEEEecCCCCCCCeEEEEEEEEeeCHHHHHHHcCCCC-ccCCCCCcccCcccEEEEEEECCCCCCCC
Confidence            68888887754 99999999999999999999999999999999987543 22357899999999999999999999999


Q ss_pred             CCCEEEEcCCcCCCCCccccCCCCCCCCCcccc----ccCCCCCcceeEEEec-CCceEECCCCCCccchhhhh-hhHHH
Q 017916           97 PGDRVALEPGISCWRCDHCKGGRYNLCPEMKFF----ATPPVHGSLANQVVHP-ADLCFKLPDNVSLEEGAMCE-PLSVG  170 (364)
Q Consensus        97 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~g~~~~~v~~~-~~~~~~lP~~~~~~~aa~~~-~~~~a  170 (364)
                      +||+|++.+..+|..|.+|+.++.++|.....+    .....+|+|+||++++ ++.++++|+ +++++||.++ ++.||
T Consensus        80 vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~~~p~-~~~~~aa~l~~~~~ta  158 (345)
T 3jv7_A           80 VGDAVAVYGPWGCGACHACARGRENYCTRAADLGITPPGLGSPGSMAEYMIVDSARHLVPIGD-LDPVAAAPLTDAGLTP  158 (345)
T ss_dssp             TTCEEEECCSCCCSSSHHHHTTCGGGCSSHHHHTCCCBTTTBCCSSBSEEEESCGGGEEECTT-CCHHHHGGGGTTTHHH
T ss_pred             CCCEEEEecCCCCCCChHHHCcCcCcCccccccccccCCcCCCceeeEEEEecchhceEeCCC-CCHHHhhhhhhhHHHH
Confidence            999999999999999999999999999432222    1234679999999999 899999999 9999999665 89999


Q ss_pred             HHHHHHc--CCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHH
Q 017916          171 LHACRRA--NIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQ  248 (364)
Q Consensus       171 ~~~l~~~--~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~  248 (364)
                      |++++..  ++++|++|||+|+|++|++++|+|+++|...|++++.+++|.++++++|++.+++++.   ++.+.+++++
T Consensus       159 ~~~l~~~~~~~~~g~~vlv~GaG~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~~~lGa~~~i~~~~---~~~~~v~~~t  235 (345)
T 3jv7_A          159 YHAISRVLPLLGPGSTAVVIGVGGLGHVGIQILRAVSAARVIAVDLDDDRLALAREVGADAAVKSGA---GAADAIRELT  235 (345)
T ss_dssp             HHHHHTTGGGCCTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESCHHHHHHHHHTTCSEEEECST---THHHHHHHHH
T ss_pred             HHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCCEEEcCCC---cHHHHHHHHh
Confidence            9999764  8999999999999999999999999995558999999999999999999999988643   7777777765


Q ss_pred             HHcCCCccEEEECCCCHHHHHHHHHhcccCCEEEEEcCCCC-CccccchhhhhcCcEEEeeccC-CCcHHHHHHHHHcCC
Q 017916          249 KAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHH-EMTVPLTPAAVREVDVVGVFRY-KNTWPLCLELLRSGK  326 (364)
Q Consensus       249 ~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~g~  326 (364)
                      .  +.++|++|||+|++..++.++++|+++|+++.+|.... ...++. .++.+++++.+.... .+.++++++++++|+
T Consensus       236 ~--g~g~d~v~d~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~-~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g~  312 (345)
T 3jv7_A          236 G--GQGATAVFDFVGAQSTIDTAQQVVAVDGHISVVGIHAGAHAKVGF-FMIPFGASVVTPYWGTRSELMEVVALARAGR  312 (345)
T ss_dssp             G--GGCEEEEEESSCCHHHHHHHHHHEEEEEEEEECSCCTTCCEEEST-TTSCTTCEEECCCSCCHHHHHHHHHHHHTTC
T ss_pred             C--CCCCeEEEECCCCHHHHHHHHHHHhcCCEEEEECCCCCCCCCcCH-HHHhCCCEEEEEecCCHHHHHHHHHHHHcCC
Confidence            3  56899999999988799999999999999999996554 444554 677899999998766 568999999999999


Q ss_pred             CCCCCceEEEeeCChhhHHHHHHHHhcCCCceEEEEeC
Q 017916          327 IDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  364 (364)
Q Consensus       327 ~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  364 (364)
                      ++  + +.++|+|  +++++|++.++++...||+|+++
T Consensus       313 l~--~-~~~~~~l--~~~~~A~~~~~~~~~~Gkvvv~p  345 (345)
T 3jv7_A          313 LD--I-HTETFTL--DEGPAAYRRLREGSIRGRGVVVP  345 (345)
T ss_dssp             CC--C-CEEEECS--TTHHHHHHHHHHTCCSSEEEECC
T ss_pred             Cc--e-EEEEEcH--HHHHHHHHHHHcCCCceeEEeCC
Confidence            94  4 4589999  99999999999999999999974

>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=5.3e-55  Score=407.15  Aligned_cols=334  Identities=26%  Similarity=0.422  Sum_probs=289.8

Q ss_pred             cceeEEEecCC-ceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCCCCCCC
Q 017916           17 VNMAAWLLGVN-TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTL   95 (364)
Q Consensus        17 ~~~~~~~~~~~-~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~   95 (364)
                      +|+++++.++. .+++.+.|.|+++++||+|||++++||++|++.+.|.+.    ..+|.++|||++|+|+++|++|++|
T Consensus         6 ~mka~~~~~~g~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~----~~~P~v~GhE~~G~V~~vG~~v~~~   81 (371)
T 1f8f_A            6 DIIAAVTPCKGADFELQALKIRQPQGDEVLVKVVATGMCHTDLIVRDQKYP----VPLPAVLGHEGSGIIEAIGPNVTEL   81 (371)
T ss_dssp             EEEEEEBCSTTCCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHTTSSC----CCSSBCCCCEEEEEEEEECTTCCSC
T ss_pred             cceEEEEcCCCCCeEEEEecCCCCCCCEEEEEEEEeecCchhHHHHcCCCC----CCCCcccCcccceEEEEeCCCCCCC
Confidence            47888888764 699999999999999999999999999999999887542    4579999999999999999999999


Q ss_pred             CCCCEEEEcCCcCCCCCccccCCCCCCCCCcccccc--------------C--------CCCCcceeEEEecCCceEECC
Q 017916           96 VPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFAT--------------P--------PVHGSLANQVVHPADLCFKLP  153 (364)
Q Consensus        96 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~--------~~~g~~~~~v~~~~~~~~~lP  153 (364)
                      ++||+|++.+ .+|..|++|+.++.++|.+....+.              .        ...|+|+||+++++++++++|
T Consensus        82 ~~GdrV~~~~-~~Cg~C~~C~~g~~~~C~~~~~~~~~g~~~~g~~~~~~~~g~~~~~~~~~~G~~aey~~v~~~~~~~iP  160 (371)
T 1f8f_A           82 QVGDHVVLSY-GYCGKCTQCNTGNPAYCSEFFGRNFSGADSEGNHALCTHDQGVVNDHFFAQSSFATYALSRENNTVKVT  160 (371)
T ss_dssp             CTTCEEEECC-CCCSSSHHHHTTCGGGCTTHHHHSSSSSCSSSCCSBC------CBCCGGGTCCSBSEEEEEGGGEEEEC
T ss_pred             CCCCEEEecC-CCCCCChhhhCcCccccccccccccccccccccccccccCCccccccccCCccccCeEEechhheEECC
Confidence            9999999998 9999999999999999987642110              0        135999999999999999999


Q ss_pred             CCCCccchhhhh-hhHHHHHHH-HHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEE
Q 017916          154 DNVSLEEGAMCE-PLSVGLHAC-RRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIV  231 (364)
Q Consensus       154 ~~~~~~~aa~~~-~~~~a~~~l-~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~  231 (364)
                      +++++++|++++ ++.|||+++ +.+++++|++|||+|+|++|++++|+|+.+|++.|++++.+++|.++++++|+++++
T Consensus       161 ~~~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlV~GaG~vG~~a~qlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi  240 (371)
T 1f8f_A          161 KDVPIELLGPLGCGIQTGAGACINALKVTPASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRLELAKQLGATHVI  240 (371)
T ss_dssp             TTSCGGGTGGGGTHHHHHHHHHHTTTCCCTTCEEEEESCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHHHTCSEEE
T ss_pred             CCCCHHHHHHhcchHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCCEEe
Confidence            999999998886 899999999 578999999999999999999999999999997789999999999999999999998


Q ss_pred             ecCCCcccHHHHHHHHHHHcCCCccEEEECCCCHHHHHHHHHhcccCCEEEEEcCCCC--CccccchhhhhcCcEEEeec
Q 017916          232 KVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHH--EMTVPLTPAAVREVDVVGVF  309 (364)
Q Consensus       232 ~~~~~~~~~~~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~--~~~~~~~~~~~~~~~~~~~~  309 (364)
                      ++..  +++.+.++++.   ++++|++||++|.+..+..++++|+++|+++.+|....  ...++...+..+++++.+.+
T Consensus       241 ~~~~--~~~~~~~~~~~---~gg~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~  315 (371)
T 1f8f_A          241 NSKT--QDPVAAIKEIT---DGGVNFALESTGSPEILKQGVDALGILGKIAVVGAPQLGTTAQFDVNDLLLGGKTILGVV  315 (371)
T ss_dssp             ETTT--SCHHHHHHHHT---TSCEEEEEECSCCHHHHHHHHHTEEEEEEEEECCCCSTTCCCCCCHHHHHHTTCEEEECS
T ss_pred             cCCc--cCHHHHHHHhc---CCCCcEEEECCCCHHHHHHHHHHHhcCCEEEEeCCCCCCCccccCHHHHHhCCCEEEEeC
Confidence            8653  57777776653   33899999999987889999999999999999986542  23455556778999999976


Q ss_pred             cC----CCcHHHHHHHHHcCCCCCCCceEEEeeCChhhHHHHHHHHhcCCCceEEEEeC
Q 017916          310 RY----KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  364 (364)
Q Consensus       310 ~~----~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  364 (364)
                      ..    .+.++++++++++|++.+.+.+.+ |+|  +++++|++.++++.. +|+|+++
T Consensus       316 ~~~~~~~~~~~~~~~l~~~g~l~~~~~i~~-~~l--~~~~~A~~~~~~~~~-~Kvvv~~  370 (371)
T 1f8f_A          316 EGSGSPKKFIPELVRLYQQGKFPFDQLVKF-YAF--DEINQAAIDSRKGIT-LKPIIKI  370 (371)
T ss_dssp             GGGSCHHHHHHHHHHHHHTTSCCGGGGEEE-EEG--GGHHHHHHHHHHTSC-SEEEEEC
T ss_pred             CCCCchHHHHHHHHHHHHcCCCCcccceeE-ecH--HHHHHHHHHHHCCCc-eEEEEee
Confidence            53    356899999999999976667878 999  999999999988765 7999875

>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A

Probab=100.00  E-value=4.6e-55  Score=404.72  Aligned_cols=337  Identities=27%  Similarity=0.378  Sum_probs=292.0

Q ss_pred             ceeEEEecCCceEEEEecCCCCCCCcEEEEEeeeeeCcccHh-hhhhcccCCccCCCCcccccceeEEEEEeCCCCCCCC
Q 017916           18 NMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVH-YLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLV   96 (364)
Q Consensus        18 ~~~~~~~~~~~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~-~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~   96 (364)
                      |+++++.++..+++.+.|.|+++++||+|||+++++|++|++ +..|.+    ...+|.++|||++|+|+++|++|++|+
T Consensus         1 MkA~~~~~~~~~~~~e~~~P~~~~~eVlVkv~a~gi~~~D~~~~~~g~~----~~~~p~v~G~E~~G~V~~vG~~v~~~~   76 (352)
T 3fpc_A            1 MKGFAMLSIGKVGWIEKEKPAPGPFDAIVRPLAVAPCTSDIHTVFEGAI----GERHNMILGHEAVGEVVEVGSEVKDFK   76 (352)
T ss_dssp             CEEEEEEETTEEEEEECCCCCCCTTCEEEEEEEEECCHHHHHHHHSCTT----CCCSSEECCCEEEEEEEEECTTCCSCC
T ss_pred             CeEEEEccCCCceEEeCCCCCCCCCeEEEEeCEEeEcccchHHHhCCCC----CCCCCcccCCcceEEEEEECCCCCcCC
Confidence            688999999899999999999999999999999999999999 556543    246799999999999999999999999


Q ss_pred             CCCEEEEcCCcCCCCCccccCCCCCCCCCcccc--ccCCCCCcceeEEEecCC--ceEECCCCCCccchhhhh-hhHHHH
Q 017916           97 PGDRVALEPGISCWRCDHCKGGRYNLCPEMKFF--ATPPVHGSLANQVVHPAD--LCFKLPDNVSLEEGAMCE-PLSVGL  171 (364)
Q Consensus        97 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~g~~~~~v~~~~~--~~~~lP~~~~~~~aa~~~-~~~~a~  171 (364)
                      +||+|++.+..+|..|.+|+.++.++|.+....  .....+|+|+||+.++++  +++++|+++++++|++++ +++|||
T Consensus        77 vGdrV~~~~~~~c~~c~~c~~g~~~~~~~~~~~~~~~~~~~G~~aey~~v~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~  156 (352)
T 3fpc_A           77 PGDRVVVPAITPDWRTSEVQRGYHQHSGGMLAGWKFSNVKDGVFGEFFHVNDADMNLAHLPKEIPLEAAVMIPDMMTTGF  156 (352)
T ss_dssp             TTCEEEECSBCCCSSSHHHHTTCGGGTTSTTTTBCBTTTBCCSSBSCEEESSHHHHCEECCTTSCHHHHTTTTTHHHHHH
T ss_pred             CCCEEEEccccCCCCchhhcCCCcCCccccccccccccCCCCcccceEEeccccCeEEECCCCCCHHHHhhccchhHHHH
Confidence            999999999999999999999999888765322  123468999999999986  999999999999999885 899999


Q ss_pred             HHHHHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHc
Q 017916          172 HACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAM  251 (364)
Q Consensus       172 ~~l~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~  251 (364)
                      ++++.+++++|++|||+|+|++|++++|+|+.+|++.|++++.+++|.++++++|+++++++..  +++.+.+++++  .
T Consensus       157 ~al~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~--~~~~~~v~~~t--~  232 (352)
T 3fpc_A          157 HGAELANIKLGDTVCVIGIGPVGLMSVAGANHLGAGRIFAVGSRKHCCDIALEYGATDIINYKN--GDIVEQILKAT--D  232 (352)
T ss_dssp             HHHHHTTCCTTCCEEEECCSHHHHHHHHHHHTTTCSSEEEECCCHHHHHHHHHHTCCEEECGGG--SCHHHHHHHHT--T
T ss_pred             HHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCceEEcCCC--cCHHHHHHHHc--C
Confidence            9999999999999999999999999999999999977888999999999999999999988643  67887777664  3


Q ss_pred             CCCccEEEECCCCHHHHHHHHHhcccCCEEEEEcCCCCCccccchh----hhhcCcEEEeeccC--CCcHHHHHHHHHcC
Q 017916          252 GTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTP----AAVREVDVVGVFRY--KNTWPLCLELLRSG  325 (364)
Q Consensus       252 ~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~----~~~~~~~~~~~~~~--~~~~~~~~~~l~~g  325 (364)
                      +.++|++||++|+++.++.++++|+++|+++.+|.......++...    ...+++++.+....  ...++++++++++|
T Consensus       233 g~g~D~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~l~~~g  312 (352)
T 3fpc_A          233 GKGVDKVVIAGGDVHTFAQAVKMIKPGSDIGNVNYLGEGDNIDIPRSEWGVGMGHKHIHGGLCPGGRLRMERLIDLVFYK  312 (352)
T ss_dssp             TCCEEEEEECSSCTTHHHHHHHHEEEEEEEEECCCCCSCSEEEEETTTTGGGTBCEEEEEBCCCCHHHHHHHHHHHHHTT
T ss_pred             CCCCCEEEECCCChHHHHHHHHHHhcCCEEEEecccCCCCceecchhHhhhhccccEEEEeeccCchhHHHHHHHHHHcC
Confidence            5689999999998788999999999999999998654333332222    33578888887654  56799999999999


Q ss_pred             CCCCCCceEEEee-CChhhHHHHHHHHhcCCC-ceEEEEeC
Q 017916          326 KIDVKPLVTHRFG-FSQKEVEEAFETSARGGT-AIKVMFNL  364 (364)
Q Consensus       326 ~~~~~~~~~~~~~-~~~~~~~~a~~~~~~~~~-~gkvvv~~  364 (364)
                      ++.+.+.++++|+ |  +++++||+.++++.. .+|+|+++
T Consensus       313 ~i~~~~~i~~~~~gl--~~~~~A~~~~~~~~~~~~Kvvi~~  351 (352)
T 3fpc_A          313 RVDPSKLVTHVFRGF--DNIEKAFMLMKDKPKDLIKPVVIL  351 (352)
T ss_dssp             SCCGGGGEEEEEEST--THHHHHHHHHHSCCTTCSEEEEEC
T ss_pred             CCChhHhheeeCCCH--HHHHHHHHHHHhCCCCcEEEEEEe
Confidence            9977778999999 9  999999999998644 48999975

>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=1.7e-55  Score=411.39  Aligned_cols=353  Identities=24%  Similarity=0.412  Sum_probs=297.3

Q ss_pred             CCCCCCCccccccchhcceeEEEecCC-ceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCccccc
Q 017916            1 MGKGGMSQGEKEDGEEVNMAAWLLGVN-TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGH   79 (364)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~   79 (364)
                      ||+.+-..---..|.-+|+++++.++. .+++.+.|.|+++++||+|||++++||++|+..+.|.+.   ...+|.++||
T Consensus         1 ~~~~~~~~~~~~~~~~~mka~~~~~~g~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~---~~~~P~v~Gh   77 (380)
T 1vj0_A            1 MGSDKIHHHHHHMMGLKAHAMVLEKFNQPLVYKEFEISDIPRGSILVEILSAGVCGSDVHMFRGEDP---RVPLPIILGH   77 (380)
T ss_dssp             -------------CCEEEEEEEBCSTTSCCEEEEEEECCCCTTCEEEEEEEEEECHHHHHHHTTCCT---TCCSSBCCCC
T ss_pred             CCccccchhhhhHhhhheEEEEEecCCCCeEEEEccCCCCCCCEEEEEEeEEeecccchHHhcCCCC---CCCCCcccCc
Confidence            444444333445566788999998886 999999999999999999999999999999999887542   1367999999


Q ss_pred             ceeEEEEEeCCCCC------CCCCCCEEEEcCCcCCCCCcccc-CCCCCCCCCccccccC-------CCCCcceeEEEe-
Q 017916           80 ECAGVIEKVGSEVK------TLVPGDRVALEPGISCWRCDHCK-GGRYNLCPEMKFFATP-------PVHGSLANQVVH-  144 (364)
Q Consensus        80 e~~G~V~~vG~~v~------~~~~Gd~V~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-------~~~g~~~~~v~~-  144 (364)
                      |++|+|+++| +|+      +|++||+|++.+..+|..|.+|. .++.++|.+..+.+..       ..+|+|+||+++ 
T Consensus        78 E~~G~V~~vG-~V~~~~~~~~~~vGdrV~~~~~~~cg~C~~C~~~g~~~~C~~~~~~g~~~~~~~~~~~~G~~aey~~v~  156 (380)
T 1vj0_A           78 EGAGRVVEVN-GEKRDLNGELLKPGDLIVWNRGITCGECYWCKVSKEPYLCPNRKVYGINRGCSEYPHLRGCYSSHIVLD  156 (380)
T ss_dssp             EEEEEEEEES-SCCBCTTSCBCCTTCEEEECSEECCSSSHHHHTSCCGGGCTTCEETTTTCCSSSTTCCCSSSBSEEEEC
T ss_pred             CcEEEEEEeC-CccccccCCCCCCCCEEEEcccCCCCCCHHHhcCCCcccCCCcceeccccccCCCCCCCccccceEEEc
Confidence            9999999999 999      99999999999999999999999 9999999987655431       357999999999 


Q ss_pred             cCCceEECCCCCCcc-chhhhhhhHHHHHHHHHcC-CCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHH
Q 017916          145 PADLCFKLPDNVSLE-EGAMCEPLSVGLHACRRAN-IGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA  222 (364)
Q Consensus       145 ~~~~~~~lP~~~~~~-~aa~~~~~~~a~~~l~~~~-~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~  222 (364)
                      ++++++++|++++++ +|+++++++|||++++.++ +++|++|||+|+|++|++++|+|+.+|+..|++++.++++.+++
T Consensus       157 ~~~~~~~iP~~l~~~~~Aa~~~~~~ta~~al~~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~  236 (380)
T 1vj0_A          157 PETDVLKVSEKDDLDVLAMAMCSGATAYHAFDEYPESFAGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGSPNRLKLA  236 (380)
T ss_dssp             TTCCEEEECTTSCHHHHHHHTTHHHHHHHHHHTCSSCCBTCEEEEECCSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHH
T ss_pred             ccceEEECCCCCChHHhHhhhcHHHHHHHHHHhcCCCCCCCEEEEECcCHHHHHHHHHHHHcCCceEEEEcCCHHHHHHH
Confidence            999999999999999 7888889999999998888 99999999999999999999999999954789998999999999


Q ss_pred             HHcCCCeEEecCC-CcccHHHHHHHHHHHcCCCccEEEECCCCHHHHHHHHHhcccCCEEEEEcCCC-C-Cccccchh-h
Q 017916          223 KELGADNIVKVST-NLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGH-H-EMTVPLTP-A  298 (364)
Q Consensus       223 ~~lg~~~~~~~~~-~~~~~~~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~-~-~~~~~~~~-~  298 (364)
                      +++|++.++++.. ..+++.+.+++++  .+.++|++|||+|.++.+..++++|+++|+++.+|... . ...++... +
T Consensus       237 ~~lGa~~vi~~~~~~~~~~~~~v~~~~--~g~g~Dvvid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~  314 (380)
T 1vj0_A          237 EEIGADLTLNRRETSVEERRKAIMDIT--HGRGADFILEATGDSRALLEGSELLRRGGFYSVAGVAVPQDPVPFKVYEWL  314 (380)
T ss_dssp             HHTTCSEEEETTTSCHHHHHHHHHHHT--TTSCEEEEEECSSCTTHHHHHHHHEEEEEEEEECCCCSCCCCEEECHHHHT
T ss_pred             HHcCCcEEEeccccCcchHHHHHHHHh--CCCCCcEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCCCCCeeEchHHHH
Confidence            9999999888641 1346666666553  24589999999997778999999999999999998654 3 44555556 7


Q ss_pred             hhcCcEEEeeccC-CCcHHHHHHHHHc--CCCCCCCceEEEeeCChhhHHHHHHHHhcCCCceEEEEeC
Q 017916          299 AVREVDVVGVFRY-KNTWPLCLELLRS--GKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  364 (364)
Q Consensus       299 ~~~~~~~~~~~~~-~~~~~~~~~~l~~--g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  364 (364)
                      +.+++++.+.+.. .+.++++++++++  |++  ++.+.++|+|  +++++|++.++++... |+|+++
T Consensus       315 ~~~~~~i~g~~~~~~~~~~~~~~l~~~~~g~l--~~~i~~~~~l--~~~~~A~~~~~~~~~~-Kvvl~~  378 (380)
T 1vj0_A          315 VLKNATFKGIWVSDTSHFVKTVSITSRNYQLL--SKLITHRLPL--KEANKALELMESREAL-KVILYP  378 (380)
T ss_dssp             TTTTCEEEECCCCCHHHHHHHHHHHHTCHHHH--GGGCCEEEEG--GGHHHHHHHHHHTSCS-CEEEEC
T ss_pred             HhCCeEEEEeecCCHHHHHHHHHHHHhhcCCe--eeEEEEEEeH--HHHHHHHHHHhcCCCc-eEEEEe
Confidence            8899999998765 5679999999999  988  7788899999  9999999999988878 999874

>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*

Probab=100.00  E-value=2e-54  Score=403.60  Aligned_cols=339  Identities=26%  Similarity=0.379  Sum_probs=291.2

Q ss_pred             hcceeEEEecCC-ceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCCCCCC
Q 017916           16 EVNMAAWLLGVN-TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT   94 (364)
Q Consensus        16 ~~~~~~~~~~~~-~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~   94 (364)
                      .+|+++++.++. .+++.+.|.|+++++||+|||++++||++|++.+.|.+.   ...+|.++|||++|+|+++|++|++
T Consensus         5 ~~mkA~~~~~~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~---~~~~P~v~GhE~~G~V~~vG~~V~~   81 (373)
T 2fzw_A            5 IKCKAAVAWEAGKPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADP---EGCFPVILGHLGAGIVESVGEGVTK   81 (373)
T ss_dssp             EEEEEEEBCSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHHTCCT---TCCSSBCCCCEEEEEEEEECTTCCS
T ss_pred             cceEEEEEecCCCCcEEEEeeCCCCCCCEEEEEEEEEEEchhhHHHhcCCCC---CCCCCccccccccEEEEEECCCCCC
Confidence            357888888764 699999999999999999999999999999999887542   1357999999999999999999999


Q ss_pred             CCCCCEEEEcCCcCCCCCccccCCCCCCCCCcccc---cc-----------------CCCCCcceeEEEecCCceEECCC
Q 017916           95 LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFF---AT-----------------PPVHGSLANQVVHPADLCFKLPD  154 (364)
Q Consensus        95 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-----------------~~~~g~~~~~v~~~~~~~~~lP~  154 (364)
                      |++||||++.+..+|..|.+|+.++.++|.+....   +.                 ....|+|+||+++++++++++|+
T Consensus        82 ~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~g~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP~  161 (373)
T 2fzw_A           82 LKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLMPDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDP  161 (373)
T ss_dssp             CCTTCEEEECSSCCCSCSHHHHCTTCCCCCTTHHHHHTTCCTTSCCSEEETTEEEBCCTTTCCSBSEEEEEGGGEEECCT
T ss_pred             CCCCCEEEECCCCCCCCChHHcCcCcccCCCcccccccccccCCcccccccccccccccCCccceeEEEEchhheEECCC
Confidence            99999999999999999999999999999975321   10                 01359999999999999999999


Q ss_pred             CCCccchhhhh-hhHHHHHHH-HHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEe
Q 017916          155 NVSLEEGAMCE-PLSVGLHAC-RRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVK  232 (364)
Q Consensus       155 ~~~~~~aa~~~-~~~~a~~~l-~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~  232 (364)
                      ++++++||+++ ++.|||+++ +.+++++|++|||+|+|++|++++|+|+.+|++.|++++++++|.++++++|++++++
T Consensus       162 ~l~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~GaG~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~  241 (373)
T 2fzw_A          162 LAPLDKVCLLGCGISTGYGAAVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATECIN  241 (373)
T ss_dssp             TSCHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHHTCSEEEC
T ss_pred             CCCHHHHhhhccHHHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEec
Confidence            99999999886 789999998 5689999999999999999999999999999977899989999999999999999888


Q ss_pred             cCCCcccHHHHHHHHHHHcCCCccEEEECCCCHHHHHHHHHhcccC-CEEEEEcCCCC--CccccchhhhhcCcEEEeec
Q 017916          233 VSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAG-GKVCLVGMGHH--EMTVPLTPAAVREVDVVGVF  309 (364)
Q Consensus       233 ~~~~~~~~~~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~--~~~~~~~~~~~~~~~~~~~~  309 (364)
                      +.+..+++.+.++++.   ++++|++||++|..+.+..++++|+++ |+++.+|....  ...++...+..++ ++.+..
T Consensus       242 ~~~~~~~~~~~v~~~~---~~g~D~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~-~i~g~~  317 (373)
T 2fzw_A          242 PQDFSKPIQEVLIEMT---DGGVDYSFECIGNVKVMRAALEACHKGWGVSVVVGVAASGEEIATRPFQLVTGR-TWKGTA  317 (373)
T ss_dssp             GGGCSSCHHHHHHHHT---TSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECSCCCTTCCEEECTHHHHTTC-EEEECS
T ss_pred             cccccccHHHHHHHHh---CCCCCEEEECCCcHHHHHHHHHhhccCCcEEEEEecCCCCceeeeCHHHHhcCC-EEEEec
Confidence            7543356777777654   348999999999878899999999999 99999986543  2344455566677 888875


Q ss_pred             cC----CCcHHHHHHHHHcCCCCCCCceEEEeeCChhhHHHHHHHHhcCCCceEEEEeC
Q 017916          310 RY----KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  364 (364)
Q Consensus       310 ~~----~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  364 (364)
                      ..    .+.++++++++++|++.+.+.+.++|+|  +++++|++.++++.. +|+++++
T Consensus       318 ~~~~~~~~~~~~~~~l~~~g~l~~~~~i~~~~~l--~~~~~A~~~~~~~~~-~kvvi~~  373 (373)
T 2fzw_A          318 FGGWKSVESVPKLVSEYMSKKIKVDEFVTHNLSF--DEINKAFELMHSGKS-IRTVVKI  373 (373)
T ss_dssp             GGGCCHHHHHHHHHHHHHTTSSCSGGGEEEEEEG--GGHHHHHHHHHHTCC-SEEEEEC
T ss_pred             cCCCCcHHHHHHHHHHHHcCCCCchheEeEEeeH--HHHHHHHHHHhCCCc-ceEEEeC
Confidence            43    4578999999999999766788999999  999999999988765 7999875

>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*

Probab=100.00  E-value=1.6e-54  Score=400.79  Aligned_cols=333  Identities=24%  Similarity=0.407  Sum_probs=297.3

Q ss_pred             ceeEEEe--cCCceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCCCCCCC
Q 017916           18 NMAAWLL--GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTL   95 (364)
Q Consensus        18 ~~~~~~~--~~~~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~   95 (364)
                      |||+++.  ++..+++.+.|+|+++||||||||.++|||++|++++.|.+    ...+|.++|||++|+|+++|++|++|
T Consensus         1 MKA~v~~~~~~~~~~l~e~~~P~~~p~eVLVkv~a~gic~~D~~~~~G~~----~~~~p~i~GhE~aG~V~~vG~~V~~~   76 (348)
T 4eez_A            1 MKAAVVRHNPDGYADLVEKELRAIKPNEALLDMEYCGVCHTDLHVAAGDF----GNKAGTVLGHEGIGIVKEIGADVSSL   76 (348)
T ss_dssp             CEEEEECSSCCSSEEEEECCCCCCCTTEEEEEEEEEECCHHHHHHHTTTT----CCCTTCBCCSEEEEEEEEECTTCCSC
T ss_pred             CeEEEEEcCCCCcEEEEEeECCCCCCCEEEEEEEEEEECHHHHHHhcCCC----CCCCCcccceeEEEEEEEECceeeec
Confidence            6788775  34689999999999999999999999999999999998754    34689999999999999999999999


Q ss_pred             CCCCEEEEcCCc-CCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCccchhhhh-hhHHHHHH
Q 017916           96 VPGDRVALEPGI-SCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHA  173 (364)
Q Consensus        96 ~~Gd~V~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~lP~~~~~~~aa~~~-~~~~a~~~  173 (364)
                      ++||||++.+.. .|..|.+|.....++|.+....+. ..+|+|+||+.+++++++++|+++++++|++++ .+.|||++
T Consensus        77 ~~GdrV~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~G~~ae~~~~~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~  155 (348)
T 4eez_A           77 QVGDRVSVAWFFEGCGHCEYCVSGNETFCREVKNAGY-SVDGGMAEEAIVVADYAVKVPDGLDPIEASSITCAGVTTYKA  155 (348)
T ss_dssp             CTTCEEEEESEEECCSSSHHHHTTCGGGCTTCEEBTT-TBCCSSBSEEEEEGGGSCBCCTTSCHHHHHHHHHHHHHHHHH
T ss_pred             ccCCeEeecccccccCccccccCCccccccccccccc-ccCCcceeeccccccceeecCCCCCHHHHhhcccceeeEEee
Confidence            999999887654 488999999999999998877664 678999999999999999999999999998776 78899999


Q ss_pred             HHHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcCC
Q 017916          174 CRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGT  253 (364)
Q Consensus       174 l~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~  253 (364)
                      ++.+++++|++|||+|+|++|.+++|+|+.++...|++++++++|.++++++|++.++++.+  +++.+.+++++  .+.
T Consensus       156 l~~~~~~~g~~VlV~GaG~~g~~a~~~a~~~~g~~Vi~~~~~~~r~~~~~~~Ga~~~i~~~~--~~~~~~v~~~t--~g~  231 (348)
T 4eez_A          156 IKVSGVKPGDWQVIFGAGGLGNLAIQYAKNVFGAKVIAVDINQDKLNLAKKIGADVTINSGD--VNPVDEIKKIT--GGL  231 (348)
T ss_dssp             HHHHTCCTTCEEEEECCSHHHHHHHHHHHHTSCCEEEEEESCHHHHHHHHHTTCSEEEEC-C--CCHHHHHHHHT--TSS
T ss_pred             ecccCCCCCCEEEEEcCCCccHHHHHHHHHhCCCEEEEEECcHHHhhhhhhcCCeEEEeCCC--CCHHHHhhhhc--CCC
Confidence            99899999999999999999999999999876668999999999999999999999998654  67888887764  367


Q ss_pred             CccEEEECCCCHHHHHHHHHhcccCCEEEEEcCCCCCccccchhhhhcCcEEEeeccC-CCcHHHHHHHHHcCCCCCCCc
Q 017916          254 GIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY-KNTWPLCLELLRSGKIDVKPL  332 (364)
Q Consensus       254 ~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~g~~~~~~~  332 (364)
                      ++|.++|+++++..+..++++++++|+++.+|.......++...+..+++++.|++.. +.+++++++++++|++  ++.
T Consensus       232 g~d~~~~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~gs~~~~~~~~~~~~~l~~~g~i--~p~  309 (348)
T 4eez_A          232 GVQSAIVCAVARIAFEQAVASLKPMGKMVAVAVPNTEMTLSVPTVVFDGVEVAGSLVGTRLDLAEAFQFGAEGKV--KPI  309 (348)
T ss_dssp             CEEEEEECCSCHHHHHHHHHTEEEEEEEEECCCCSCEEEECHHHHHHSCCEEEECCSCCHHHHHHHHHHHHTTSC--CCC
T ss_pred             CceEEEEeccCcchhheeheeecCCceEEEEeccCCCCccCHHHHHhCCeEEEEEecCCHHHHHHHHHHHHcCCC--EEE
Confidence            8999999999999999999999999999999987776677788889999999998776 5679999999999998  555


Q ss_pred             eEEEeeCChhhHHHHHHHHhcCCCceEEEEeC
Q 017916          333 VTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  364 (364)
Q Consensus       333 ~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  364 (364)
                      + ++|+|  +++++|++.+++++..||+||+|
T Consensus       310 ~-~~~~l--~~~~~A~~~l~~g~~~GKvVl~~  338 (348)
T 4eez_A          310 V-ATRKL--EEINDIIDEMKAGKIEGRMVIDF  338 (348)
T ss_dssp             E-EEECG--GGHHHHHHHHHTTCCSSEEEEEC
T ss_pred             E-EEEeH--HHHHHHHHHHHCCCCccEEEEEc
Confidence            4 78999  99999999999999999999986

>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A

Probab=100.00  E-value=1.5e-53  Score=392.43  Aligned_cols=332  Identities=30%  Similarity=0.457  Sum_probs=289.7

Q ss_pred             ceeEEEecCC-ceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCCCCCCCC
Q 017916           18 NMAAWLLGVN-TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLV   96 (364)
Q Consensus        18 ~~~~~~~~~~-~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~   96 (364)
                      |+++++.++. .+++.+.|.|+++++||+|||++++||++|++.+.|.+.  ....+|.++|||++|+|+++|++|++|+
T Consensus         1 Mka~~~~~~g~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~--~~~~~p~v~GhE~~G~V~~vG~~v~~~~   78 (339)
T 1rjw_A            1 MKAAVVEQFKEPLKIKEVEKPTISYGEVLVRIKACGVCHTDLHAAHGDWP--VKPKLPLIPGHEGVGIVEEVGPGVTHLK   78 (339)
T ss_dssp             CEEEEBSSTTSCCEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHTCSS--SCCCSSBCCCSCEEEEEEEECTTCCSCC
T ss_pred             CeEEEEcCCCCCcEEEEeeCCCCCCCEEEEEEEEEeEchhhHHHhcCCCC--cCCCCCeeccccceEEEEEECCCCCcCC
Confidence            5777877765 799999999999999999999999999999999887543  1246799999999999999999999999


Q ss_pred             CCCEEEEcCCc-CCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCccchhhhh-hhHHHHHHH
Q 017916           97 PGDRVALEPGI-SCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHAC  174 (364)
Q Consensus        97 ~Gd~V~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~lP~~~~~~~aa~~~-~~~~a~~~l  174 (364)
                      +||+|++.+.. .|..|.+|+.++.++|.+....+. ..+|+|+||+++++++++++|+++++++||.++ .+.|||+++
T Consensus        79 vGdrV~~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~-~~~G~~aey~~v~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l  157 (339)
T 1rjw_A           79 VGDRVGIPWLYSACGHCDYCLSGQETLCEHQKNAGY-SVDGGYAEYCRAAADYVVKIPDNLSFEEAAPIFCAGVTTYKAL  157 (339)
T ss_dssp             TTCEEEECSEEECCSCSHHHHTTCGGGCTTCEEBTT-TBCCSSBSEEEEEGGGCEECCTTSCHHHHGGGGTHHHHHHHHH
T ss_pred             CCCEEEEecCCCCCCCCchhhCcCcccCCCcceeec-CCCCcceeeEEechHHEEECCCCCCHHHhhhhhhhHHHHHHHH
Confidence            99999987654 499999999999999998876653 568999999999999999999999999988775 788999999


Q ss_pred             HHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcCCC
Q 017916          175 RRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTG  254 (364)
Q Consensus       175 ~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~  254 (364)
                      +..++++|++|||+|+|++|++++|+|+.+|+ .|++++.++++.++++++|++.++++.+  +++.+.+++..    ++
T Consensus       158 ~~~~~~~g~~VlV~GaG~vG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~lGa~~~~d~~~--~~~~~~~~~~~----~~  230 (339)
T 1rjw_A          158 KVTGAKPGEWVAIYGIGGLGHVAVQYAKAMGL-NVVAVDIGDEKLELAKELGADLVVNPLK--EDAAKFMKEKV----GG  230 (339)
T ss_dssp             HHHTCCTTCEEEEECCSTTHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCSEEECTTT--SCHHHHHHHHH----SS
T ss_pred             HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHCCCCEEecCCC--ccHHHHHHHHh----CC
Confidence            87799999999999998899999999999999 7899989999999999999998887653  57777776653    48


Q ss_pred             ccEEEECCCCHHHHHHHHHhcccCCEEEEEcCCCCCccccchhhhhcCcEEEeeccC-CCcHHHHHHHHHcCCCCCCCce
Q 017916          255 IDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY-KNTWPLCLELLRSGKIDVKPLV  333 (364)
Q Consensus       255 ~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~g~~~~~~~~  333 (364)
                      +|++||++|.+..++.++++|+++|+++.+|.......++...++.+++++.+.... .+.++++++++++|++  ++. 
T Consensus       231 ~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g~l--~~~-  307 (339)
T 1rjw_A          231 VHAAVVTAVSKPAFQSAYNSIRRGGACVLVGLPPEEMPIPIFDTVLNGIKIIGSIVGTRKDLQEALQFAAEGKV--KTI-  307 (339)
T ss_dssp             EEEEEESSCCHHHHHHHHHHEEEEEEEEECCCCSSEEEEEHHHHHHTTCEEEECCSCCHHHHHHHHHHHHTTSC--CCC-
T ss_pred             CCEEEECCCCHHHHHHHHHHhhcCCEEEEecccCCCCccCHHHHHhCCcEEEEeccCCHHHHHHHHHHHHcCCC--Ccc-
Confidence            999999999878999999999999999999876544445555677899999998765 5679999999999998  444 


Q ss_pred             EEEeeCChhhHHHHHHHHhcCCCceEEEEeC
Q 017916          334 THRFGFSQKEVEEAFETSARGGTAIKVMFNL  364 (364)
Q Consensus       334 ~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  364 (364)
                      .++|+|  +++++|++.+++++..||+|+++
T Consensus       308 ~~~~~l--~~~~~A~~~~~~~~~~gKvvi~~  336 (339)
T 1rjw_A          308 IEVQPL--EKINEVFDRMLKGQINGRVVLTL  336 (339)
T ss_dssp             EEEEEG--GGHHHHHHHHHTTCCSSEEEEEC
T ss_pred             EEEEcH--HHHHHHHHHHHcCCCceEEEEec
Confidence            478999  99999999999988899999974

>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}

Probab=100.00  E-value=2e-54  Score=399.78  Aligned_cols=325  Identities=21%  Similarity=0.290  Sum_probs=281.8

Q ss_pred             hcceeEEEecC-CceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCCCCCC
Q 017916           16 EVNMAAWLLGV-NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT   94 (364)
Q Consensus        16 ~~~~~~~~~~~-~~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~   94 (364)
                      .+|+++++.++ +.+++.+.|.|+++++||+|||+++++|++|++.+.|.+..   ..+|.++|||++|+|+++|++|++
T Consensus         3 m~mka~~~~~~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~---~~~p~i~G~E~~G~V~~vG~~v~~   79 (348)
T 3two_A            3 VQSKGFAIFSKDEHFKPHDFSRHAVGPRDVLIDILYAGICHSDIHSAYSEWKE---GIYPMIPGHEIAGIIKEVGKGVKK   79 (348)
T ss_dssp             EEEEEEEBCSTTSCCEEEEEEECCCCTTEEEEEEEEEEECHHHHHHHTTSSSC---CCSSBCCCCCEEEEEEEECTTCCS
T ss_pred             eEEEEEEEccCCCCCeEEEeeCCCCCCCeEEEEEEEeeecccchhhhcCCCCC---CCCCeecCcceeEEEEEECCCCCC
Confidence            35888888865 68999999999999999999999999999999999875432   467999999999999999999999


Q ss_pred             CCCCCEEEEcCC-cCCCCCccccCCCCCCCCCccccccC---------CCCCcceeEEEecCCceEECCCCCCccchhhh
Q 017916           95 LVPGDRVALEPG-ISCWRCDHCKGGRYNLCPEMKFFATP---------PVHGSLANQVVHPADLCFKLPDNVSLEEGAMC  164 (364)
Q Consensus        95 ~~~Gd~V~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~g~~~~~v~~~~~~~~~lP~~~~~~~aa~~  164 (364)
                      |++||+|++.+. .+|..|.+|+.+++++|. ....+..         ..+|+|+||+++++++++++|+++++++||.+
T Consensus        80 ~~vGdrV~~~~~~~~Cg~C~~C~~g~~~~c~-~~~~~~~~~~~~~~~~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l  158 (348)
T 3two_A           80 FKIGDVVGVGCFVNSCKACKPCKEHQEQFCT-KVVFTYDCLDSFHDNEPHMGGYSNNIVVDENYVISVDKNAPLEKVAPL  158 (348)
T ss_dssp             CCTTCEEEECSEEECCSCSHHHHTTCGGGCT-TCEESSSSEEGGGTTEECCCSSBSEEEEEGGGCEECCTTSCHHHHGGG
T ss_pred             CCCCCEEEEeCCcCCCCCChhHhCCCcccCc-ccccccccccccccCCcCCccccceEEechhhEEECCCCCCHHHhhhh
Confidence            999999998664 689999999999999998 3332221         12399999999999999999999999999977


Q ss_pred             h-hhHHHHHHHHHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHH
Q 017916          165 E-PLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEE  243 (364)
Q Consensus       165 ~-~~~~a~~~l~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~  243 (364)
                      + .+.|||+++++.++++|++|||+|+|++|++++|+|+.+|+ .|++++.+++|.++++++|+++++ .+  .+.+   
T Consensus       159 ~~~~~ta~~~l~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~~~lGa~~v~-~~--~~~~---  231 (348)
T 3two_A          159 LCAGITTYSPLKFSKVTKGTKVGVAGFGGLGSMAVKYAVAMGA-EVSVFARNEHKKQDALSMGVKHFY-TD--PKQC---  231 (348)
T ss_dssp             GTHHHHHHHHHHHTTCCTTCEEEEESCSHHHHHHHHHHHHTTC-EEEEECSSSTTHHHHHHTTCSEEE-SS--GGGC---
T ss_pred             hhhHHHHHHHHHhcCCCCCCEEEEECCcHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHhcCCCeec-CC--HHHH---
Confidence            5 78899999988899999999999999999999999999999 788989999999999999999887 21  1111   


Q ss_pred             HHHHHHHcCCCccEEEECCCCHHHHHHHHHhcccCCEEEEEcCCC-CCcc-ccchhhh-hcCcEEEeeccC-CCcHHHHH
Q 017916          244 VEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGH-HEMT-VPLTPAA-VREVDVVGVFRY-KNTWPLCL  319 (364)
Q Consensus       244 i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~-~~~~-~~~~~~~-~~~~~~~~~~~~-~~~~~~~~  319 (364)
                              ..++|++||++|+...++.++++|+++|+++.+|... .... ++...++ .+++++.+.... ...+++++
T Consensus       232 --------~~~~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~  303 (348)
T 3two_A          232 --------KEELDFIISTIPTHYDLKDYLKLLTYNGDLALVGLPPVEVAPVLSVFDFIHLGNRKVYGSLIGGIKETQEMV  303 (348)
T ss_dssp             --------CSCEEEEEECCCSCCCHHHHHTTEEEEEEEEECCCCCGGGCCEEEHHHHHHTCSCEEEECCSCCHHHHHHHH
T ss_pred             --------hcCCCEEEECCCcHHHHHHHHHHHhcCCEEEEECCCCCCCcccCCHHHHHhhCCeEEEEEecCCHHHHHHHH
Confidence                    2389999999997668899999999999999998765 4444 5556677 899999998776 56799999


Q ss_pred             HHHHcCCCCCCCceEEEeeCChhhHHHHHHHHhcCCCceEEEEeC
Q 017916          320 ELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  364 (364)
Q Consensus       320 ~~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  364 (364)
                      +++++|++  ++.+ ++|+|  +++++|++.++++...||+|+++
T Consensus       304 ~l~~~g~l--~~~~-~~~~l--~~~~~A~~~~~~~~~~gKvVi~~  343 (348)
T 3two_A          304 DFSIKHNI--YPEI-DLILG--KDIDTAYHNLTHGKAKFRYVIDM  343 (348)
T ss_dssp             HHHHHTTC--CCCE-EEECG--GGHHHHHHHHHTTCCCSEEEEEG
T ss_pred             HHHHhCCC--CceE-EEEEH--HHHHHHHHHHHcCCCceEEEEec
Confidence            99999999  4444 78999  99999999999999999999974

>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}

Probab=100.00  E-value=2.7e-53  Score=394.21  Aligned_cols=333  Identities=23%  Similarity=0.275  Sum_probs=287.8

Q ss_pred             ccchhcceeEEEe--cCCceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeC
Q 017916           12 EDGEEVNMAAWLL--GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVG   89 (364)
Q Consensus        12 ~~~~~~~~~~~~~--~~~~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG   89 (364)
                      .+|+.+|+++++.  +++.+++.+.|.|+++++||+|||++++||++|++.+.|.+..  ...+|.++|||++|+|+++|
T Consensus        22 ~~m~~~mkA~~~~~~~~~~l~~~e~p~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~--~~~~P~v~GhE~~G~V~~vG   99 (363)
T 3uog_A           22 SMMSKWMQEWSTETVAPHDLKLAERPVPEAGEHDIIVRTLAVSLNYRDKLVLETGMGL--DLAFPFVPASDMSGVVEAVG   99 (363)
T ss_dssp             -CCCSEEEEEEBSCTTTTCCEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHHHCTTC--CCCSSBCCCCEEEEEEEEEC
T ss_pred             ccCchhhEEEEEccCCCCCcEEEeeeCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCC--CCCCCcCcccceEEEEEEEC
Confidence            3456678999988  5689999999999999999999999999999999999886532  25689999999999999999


Q ss_pred             CCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCc---cccccCCCCCcceeEEEecCCceEECCCCCCccchhhhh-
Q 017916           90 SEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEM---KFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-  165 (364)
Q Consensus        90 ~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~g~~~~~v~~~~~~~~~lP~~~~~~~aa~~~-  165 (364)
                      ++|++|++||+|++.+..      .|..++ ++|.+.   ........+|+|+||+++++++++++|+++++++||+++ 
T Consensus       100 ~~v~~~~vGDrV~~~~~~------~c~~g~-~~c~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~  172 (363)
T 3uog_A          100 KSVTRFRPGDRVISTFAP------GWLDGL-RPGTGRTPAYETLGGAHPGVLSEYVVLPEGWFVAAPKSLDAAEASTLPC  172 (363)
T ss_dssp             TTCCSCCTTCEEEECSST------TCCSSS-CCSCSSCCCCCCTTTTSCCCCBSEEEEEGGGEEECCTTSCHHHHHTTTT
T ss_pred             CCCCCCCCCCEEEEeccc------cccccc-cccccccccccccCcCCCCcceeEEEechHHeEECCCCCCHHHHhhccc
Confidence            999999999999987543      566666 788732   210123467999999999999999999999999999776 


Q ss_pred             hhHHHHHHH-HHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHH
Q 017916          166 PLSVGLHAC-RRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEV  244 (364)
Q Consensus       166 ~~~~a~~~l-~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i  244 (364)
                      .+.|||+++ +.+++++|++|||+|+|++|++++|+|+.+|+ .|++++.++++.++++++|++.+++  ...+++.+.+
T Consensus       173 ~~~ta~~al~~~~~~~~g~~VlV~G~G~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~~~lGa~~vi~--~~~~~~~~~v  249 (363)
T 3uog_A          173 AGLTAWFALVEKGHLRAGDRVVVQGTGGVALFGLQIAKATGA-EVIVTSSSREKLDRAFALGADHGIN--RLEEDWVERV  249 (363)
T ss_dssp             HHHHHHHHHTTTTCCCTTCEEEEESSBHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTCSEEEE--TTTSCHHHHH
T ss_pred             HHHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-EEEEEecCchhHHHHHHcCCCEEEc--CCcccHHHHH
Confidence            788999999 67999999999999999999999999999999 7888889999999999999999887  3346788888


Q ss_pred             HHHHHHcCCCccEEEECCCCHHHHHHHHHhcccCCEEEEEcCCCC-CccccchhhhhcCcEEEeeccC-CCcHHHHHHHH
Q 017916          245 EKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHH-EMTVPLTPAAVREVDVVGVFRY-KNTWPLCLELL  322 (364)
Q Consensus       245 ~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l  322 (364)
                      +++..  +.++|++|||+| .+.+..++++|+++|+++.+|.... ...++...+..+++++.+.... .+.++++++++
T Consensus       250 ~~~~~--g~g~D~vid~~g-~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~  326 (363)
T 3uog_A          250 YALTG--DRGADHILEIAG-GAGLGQSLKAVAPDGRISVIGVLEGFEVSGPVGPLLLKSPVVQGISVGHRRALEDLVGAV  326 (363)
T ss_dssp             HHHHT--TCCEEEEEEETT-SSCHHHHHHHEEEEEEEEEECCCSSCEECCBTTHHHHTCCEEEECCCCCHHHHHHHHHHH
T ss_pred             HHHhC--CCCceEEEECCC-hHHHHHHHHHhhcCCEEEEEecCCCcccCcCHHHHHhCCcEEEEEecCCHHHHHHHHHHH
Confidence            77653  568999999999 6788999999999999999986544 2456667788999999998776 57899999999


Q ss_pred             HcCCCCCCCceEEEeeCChhhHHHHHHHHhcCCCceEEEEeC
Q 017916          323 RSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  364 (364)
Q Consensus       323 ~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  364 (364)
                      ++|++  ++.+.++|+|  +++++||+.++++. .||+|+++
T Consensus       327 ~~g~l--~~~i~~~~~l--~~~~~A~~~~~~~~-~gKvvi~~  363 (363)
T 3uog_A          327 DRLGL--KPVIDMRYKF--TEVPEALAHLDRGP-FGKVVIEF  363 (363)
T ss_dssp             HHHTC--CCCEEEEEEG--GGHHHHHHTGGGCC-SBEEEEEC
T ss_pred             HcCCC--ccceeeEEcH--HHHHHHHHHHHcCC-CccEEEeC
Confidence            99998  7889999999  99999999999998 99999986

>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}

Probab=100.00  E-value=1.4e-53  Score=393.58  Aligned_cols=332  Identities=23%  Similarity=0.364  Sum_probs=267.1

Q ss_pred             hcceeEEEecCC-ceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCCCCCC
Q 017916           16 EVNMAAWLLGVN-TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT   94 (364)
Q Consensus        16 ~~~~~~~~~~~~-~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~   94 (364)
                      ++|+++++.++. .+++.+.|.|+++++||+|||+++++|++|++.+.|.+.. ....+|.++|||++|+|+++|++ ++
T Consensus         2 ~~mka~~~~~~g~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~-~~~~~p~i~G~E~~G~V~~vG~~-~~   79 (344)
T 2h6e_A            2 VKSKAALLKKFSEPLSIEDVNIPEPQGEEVLIRIGGAGVCRTDLRVWKGVEAK-QGFRLPIILGHENAGTIVEVGEL-AK   79 (344)
T ss_dssp             EEEEBCEECSCCC-----EEEECCCCTTCEEEEEEEEECCHHHHHHHTTSCCC-TTCCSSEECCCCEEEEEEEECTT-CC
T ss_pred             ceeEEEEEecCCCCCeEEEeeCCCCCCCEEEEEEEEEEechhhHHHHcCCCcc-cCCCCCccccccceEEEEEECCC-CC
Confidence            358888888774 7999999999999999999999999999999999875421 12367999999999999999999 99


Q ss_pred             CCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEec-CCceEECCCCCCccchhhhh-hhHHHHH
Q 017916           95 LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHP-ADLCFKLPDNVSLEEGAMCE-PLSVGLH  172 (364)
Q Consensus        95 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-~~~~~~lP~~~~~~~aa~~~-~~~~a~~  172 (364)
                      |++||||++.+..+|..|.+|+.++.++|.+...++. ..+|+|+||++++ +++++++ +++++++|+.++ .+.|||+
T Consensus        80 ~~~GdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~G~-~~~G~~aey~~v~~~~~~~~i-~~l~~~~aa~l~~~~~ta~~  157 (344)
T 2h6e_A           80 VKKGDNVVVYATWGDLTCRYCREGKFNICKNQIIPGQ-TTNGGFSEYMLVKSSRWLVKL-NSLSPVEAAPLADAGTTSMG  157 (344)
T ss_dssp             CCTTCEEEECSCBCCSCSTTGGGTCGGGCTTCBCBTT-TBCCSSBSEEEESCGGGEEEE-SSSCHHHHGGGGTHHHHHHH
T ss_pred             CCCCCEEEECCCCCCCCChhhhCCCcccCCCcccccc-ccCCcceeeEEecCcccEEEe-CCCCHHHhhhhhhhhHHHHH
Confidence            9999999998888999999999999999998766553 5679999999999 9999999 999999988665 7889999


Q ss_pred             HHHHc-----CCCCCCEEEEEcCCHHHHHHHHHHHHC--CCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHH
Q 017916          173 ACRRA-----NIGPETNVLIMGAGPIGLVTMLGARAF--GAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVE  245 (364)
Q Consensus       173 ~l~~~-----~~~~g~~VLI~Gag~~G~~ai~la~~~--g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~  245 (364)
                      +++..     ++ +|++|||+|+|++|++++|+|+.+  |+ .|++++.+++|.++++++|+++++++.+. ++   .++
T Consensus       158 al~~~~~~~~~~-~g~~VlV~GaG~vG~~aiqlak~~~~Ga-~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~-~~---~~~  231 (344)
T 2h6e_A          158 AIRQALPFISKF-AEPVVIVNGIGGLAVYTIQILKALMKNI-TIVGISRSKKHRDFALELGADYVSEMKDA-ES---LIN  231 (344)
T ss_dssp             HHHHHHHHHTTC-SSCEEEEECCSHHHHHHHHHHHHHCTTC-EEEEECSCHHHHHHHHHHTCSEEECHHHH-HH---HHH
T ss_pred             HHHhhhhcccCC-CCCEEEEECCCHHHHHHHHHHHHhcCCC-EEEEEeCCHHHHHHHHHhCCCEEeccccc-hH---HHH
Confidence            99766     89 999999999999999999999999  99 68999899999999999999998875320 12   233


Q ss_pred             HHHHHcCCCccEEEECCCCHHHHHHHHHhcccCCEEEEEcCCCCCccccchhhhhcCcEEEeeccC-CCcHHHHHHHHHc
Q 017916          246 KIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY-KNTWPLCLELLRS  324 (364)
Q Consensus       246 ~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~  324 (364)
                      ++.  .+.++|++|||+|....++.++++|+++|+++.+|.......++...+..+++++.+.... .+.++++++++++
T Consensus       232 ~~~--~g~g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~  309 (344)
T 2h6e_A          232 KLT--DGLGASIAIDLVGTEETTYNLGKLLAQEGAIILVGMEGKRVSLEAFDTAVWNKKLLGSNYGSLNDLEDVVRLSES  309 (344)
T ss_dssp             HHH--TTCCEEEEEESSCCHHHHHHHHHHEEEEEEEEECCCCSSCCCCCHHHHHHTTCEEEECCSCCHHHHHHHHHHHHT
T ss_pred             Hhh--cCCCccEEEECCCChHHHHHHHHHhhcCCEEEEeCCCCCCcccCHHHHhhCCcEEEEEecCCHHHHHHHHHHHHc
Confidence            333  2458999999999877999999999999999999865544455566678899999998765 5679999999999


Q ss_pred             CCCCCCCceEEEeeCChhhHHHHHHHHhcCCCceEEEEeC
Q 017916          325 GKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  364 (364)
Q Consensus       325 g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  364 (364)
                      |++  ++.+ ++|+|  +++++|++.++++...||+|+++
T Consensus       310 g~i--~~~i-~~~~l--~~~~~A~~~~~~~~~~gKvvl~~  344 (344)
T 2h6e_A          310 GKI--KPYI-IKVPL--DDINKAFTNLDEGRVDGRQVITP  344 (344)
T ss_dssp             TSS--CCCE-EEECC------------------CEEEECC
T ss_pred             CCC--Ccce-EEEeH--HHHHHHHHHHHcCCCceEEEEeC
Confidence            998  5667 99999  99999999999988889999974

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}

Probab=100.00  E-value=7.4e-53  Score=389.18  Aligned_cols=338  Identities=22%  Similarity=0.324  Sum_probs=292.4

Q ss_pred             chhcceeEEEecCC-ceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCCCC
Q 017916           14 GEEVNMAAWLLGVN-TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEV   92 (364)
Q Consensus        14 ~~~~~~~~~~~~~~-~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v   92 (364)
                      ++.+|+++++.++. .+++.+.|.|+++++||+|||++++||++|++.+.|.+.  ....+|.++|||++|+|+++|++|
T Consensus         2 ~p~~mka~~~~~~g~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~--~~~~~p~v~G~E~~G~V~~vG~~v   79 (347)
T 2hcy_A            2 IPETQKGVIFYESHGKLEYKDIPVPKPKANELLINVKYSGVCHTDLHAWHGDWP--LPVKLPLVGGHEGAGVVVGMGENV   79 (347)
T ss_dssp             CCSEEEEEEESSTTCCCEEEEEECCCCCTTEEEEEEEEEEECHHHHHHHHTCSS--SCCCSSEECCCEEEEEEEEECTTC
T ss_pred             CCcccEEEEEeCCCCCCEEEEeeCCCCCCCEEEEEEEEEEechhHHHHhcCCCC--CCCCCCcccCccceEEEEEECCCC
Confidence            45568999998775 799999999999999999999999999999999887542  124679999999999999999999


Q ss_pred             CCCCCCCEEEEcCCc-CCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCccchhhhh-hhHHH
Q 017916           93 KTLVPGDRVALEPGI-SCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVG  170 (364)
Q Consensus        93 ~~~~~Gd~V~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~lP~~~~~~~aa~~~-~~~~a  170 (364)
                      ++|++||||++.+.. .|..|.+|+.++.++|.+....+ ...+|+|+||+++++++++++|+++++++|+.++ .+.||
T Consensus        80 ~~~~~GdrV~~~~~~~~cg~C~~C~~g~~~~C~~~~~~g-~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta  158 (347)
T 2hcy_A           80 KGWKIGDYAGIKWLNGSCMACEYCELGNESNCPHADLSG-YTHDGSFQQYATADAVQAAHIPQGTDLAQVAPILCAGITV  158 (347)
T ss_dssp             CSCCTTCEEEECSEEECCSSSTTTTTTCGGGCTTCEEBT-TTBCCSSBSEEEEETTTSEEECTTCCHHHHGGGGTHHHHH
T ss_pred             CCCcCCCEEEEecCCCCCCCChhhhCCCcccCccccccc-cCCCCcceeEEEeccccEEECCCCCCHHHHHHHhhhHHHH
Confidence            999999999987654 49999999999999999887665 3568999999999999999999999999988775 78899


Q ss_pred             HHHHHHcCCCCCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHH
Q 017916          171 LHACRRANIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQK  249 (364)
Q Consensus       171 ~~~l~~~~~~~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~  249 (364)
                      |+++++.++++|++|||+|+ |++|++++|+++..|+ .|+++++++++.+.++++|++.++++.+ .+++.+.+++...
T Consensus       159 ~~~l~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga-~V~~~~~~~~~~~~~~~~g~~~~~d~~~-~~~~~~~~~~~~~  236 (347)
T 2hcy_A          159 YKALKSANLMAGHWVAISGAAGGLGSLAVQYAKAMGY-RVLGIDGGEGKEELFRSIGGEVFIDFTK-EKDIVGAVLKATD  236 (347)
T ss_dssp             HHHHHTTTCCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECSTTHHHHHHHTTCCEEEETTT-CSCHHHHHHHHHT
T ss_pred             HHHHHhcCCCCCCEEEEECCCchHHHHHHHHHHHCCC-cEEEEcCCHHHHHHHHHcCCceEEecCc-cHhHHHHHHHHhC
Confidence            99998889999999999998 9999999999999999 7888888889999999999988887642 3577777766542


Q ss_pred             HcCCCccEEEECCCCHHHHHHHHHhcccCCEEEEEcCCCC-CccccchhhhhcCcEEEeeccC-CCcHHHHHHHHHcCCC
Q 017916          250 AMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHH-EMTVPLTPAAVREVDVVGVFRY-KNTWPLCLELLRSGKI  327 (364)
Q Consensus       250 ~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~g~~  327 (364)
                        + ++|++||++|....++.++++|+++|+++.+|.... ...++...++.+++++.+.... .+.++++++++++|++
T Consensus       237 --~-~~D~vi~~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g~l  313 (347)
T 2hcy_A          237 --G-GAHGVINVSVSEAAIEASTRYVRANGTTVLVGMPAGAKCCSDVFNQVVKSISIVGSYVGNRADTREALDFFARGLV  313 (347)
T ss_dssp             --S-CEEEEEECSSCHHHHHHHTTSEEEEEEEEECCCCTTCEEEEEHHHHHHTTCEEEECCCCCHHHHHHHHHHHHTTSC
T ss_pred             --C-CCCEEEECCCcHHHHHHHHHHHhcCCEEEEEeCCCCCCCCCCHHHHhhCCcEEEEccCCCHHHHHHHHHHHHhCCC
Confidence              4 899999999987899999999999999999986542 2345555677899999998765 5678999999999998


Q ss_pred             CCCCceEEEeeCChhhHHHHHHHHhcCCCceEEEEeC
Q 017916          328 DVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  364 (364)
Q Consensus       328 ~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  364 (364)
                        ++. .++|+|  +++++|++.++++...||+|+++
T Consensus       314 --~~~-~~~~~l--~~~~~A~~~~~~~~~~gKvvv~~  345 (347)
T 2hcy_A          314 --KSP-IKVVGL--STLPEIYEKMEKGQIVGRYVVDT  345 (347)
T ss_dssp             --CCC-EEEEEG--GGHHHHHHHHHTTCCSSEEEEES
T ss_pred             --ccc-eEEEcH--HHHHHHHHHHHcCCcceeEEEec
Confidence              444 478999  99999999999988899999974

>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A

Probab=100.00  E-value=4.5e-54  Score=399.13  Aligned_cols=334  Identities=23%  Similarity=0.333  Sum_probs=285.1

Q ss_pred             cchhcceeEEEecCC-ceEEEE--ecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeC
Q 017916           13 DGEEVNMAAWLLGVN-TLKIQP--FELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVG   89 (364)
Q Consensus        13 ~~~~~~~~~~~~~~~-~~~~~~--~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG   89 (364)
                      +++++|+++++.++. .+++.+  .|.|+++++||+|||++++||++|++.+.|.+..   ..+|.++|||++|+|+++|
T Consensus         2 ~~p~~mka~~~~~~~~~l~~~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~---~~~p~v~GhE~~G~V~~vG   78 (360)
T 1piw_A            2 SYPEKFEGIAIQSHEDWKNPKKTKYDPKPFYDHDIDIKIEACGVCGSDIHCAAGHWGN---MKMPLVVGHEIVGKVVKLG   78 (360)
T ss_dssp             CTTTCEEEEEECCSSSTTSCEEEEECCCCCCTTEEEEEEEEEEECHHHHHHHTTTTSC---CCSSEECCCCEEEEEEEEC
T ss_pred             CCChheEEEEEecCCCCeeEEeccccCCCCCCCeEEEEEEEeccchhhHHHhcCCCCC---CCCCcccCcCceEEEEEeC
Confidence            345578999988764 688899  9999999999999999999999999998875421   3579999999999999999


Q ss_pred             CCCC-CCCCCCEEEEcC-CcCCCCCccccCCCCCCCCCc-cccc-----cCCCCCcceeEEEecCCceEECCCCCCccch
Q 017916           90 SEVK-TLVPGDRVALEP-GISCWRCDHCKGGRYNLCPEM-KFFA-----TPPVHGSLANQVVHPADLCFKLPDNVSLEEG  161 (364)
Q Consensus        90 ~~v~-~~~~Gd~V~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~-----~~~~~g~~~~~v~~~~~~~~~lP~~~~~~~a  161 (364)
                      ++|+ +|++||||+..+ ..+|..|.+|+.++.++|.+. ..+.     ....+|+|+||+++++++++++|+++++++|
T Consensus        79 ~~v~~~~~~GdrV~~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~a  158 (360)
T 1piw_A           79 PKSNSGLKVGQRVGVGAQVFSCLECDRCKNDNEPYCTKFVTTYSQPYEDGYVSQGGYANYVRVHEHFVVPIPENIPSHLA  158 (360)
T ss_dssp             TTCCSSCCTTCEEEECSEEECCSCSHHHHTTCGGGCTTCEESSSCBCTTSCBCCCSSBSEEEEEGGGEEECCTTSCHHHH
T ss_pred             CCCCCCCCCCCEEEEecCCCCCCCChhhcCCCcccCcchhhccccccCCCccCCCcceeEEEEchhheEECCCCCCHHHh
Confidence            9999 999999996544 468999999999999999976 2220     1235799999999999999999999999998


Q ss_pred             hhhh-hhHHHHHHHHHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccH
Q 017916          162 AMCE-PLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDI  240 (364)
Q Consensus       162 a~~~-~~~~a~~~l~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~  240 (364)
                      |.++ .+.|||++++++++++|++|||+|+|++|++++|+|+.+|+ .|++++.++++.++++++|+++++++.+. .++
T Consensus       159 a~l~~~~~ta~~~l~~~~~~~g~~VlV~GaG~vG~~~~qlak~~Ga-~Vi~~~~~~~~~~~~~~lGa~~v~~~~~~-~~~  236 (360)
T 1piw_A          159 APLLCGGLTVYSPLVRNGCGPGKKVGIVGLGGIGSMGTLISKAMGA-ETYVISRSSRKREDAMKMGADHYIATLEE-GDW  236 (360)
T ss_dssp             GGGGTHHHHHHHHHHHTTCSTTCEEEEECCSHHHHHHHHHHHHHTC-EEEEEESSSTTHHHHHHHTCSEEEEGGGT-SCH
T ss_pred             hhhhhhHHHHHHHHHHcCCCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHcCCCEEEcCcCc-hHH
Confidence            8765 78899999988999999999999999999999999999999 58889889999999999999999886532 144


Q ss_pred             HHHHHHHHHHcCCCccEEEECCCC--HHHHHHHHHhcccCCEEEEEcCCCCCc-cccchhhhhcCcEEEeeccC-CCcHH
Q 017916          241 AEEVEKIQKAMGTGIDVSFDCAGF--NKTMSTALSATRAGGKVCLVGMGHHEM-TVPLTPAAVREVDVVGVFRY-KNTWP  316 (364)
Q Consensus       241 ~~~i~~~~~~~~~~~d~vid~~g~--~~~~~~~~~~l~~~G~~v~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~  316 (364)
                      .+.+       .+++|++||++|.  +..++.++++|+++|+++.+|.... . .++...++.+++++.+.... .+.++
T Consensus       237 ~~~~-------~~~~D~vid~~g~~~~~~~~~~~~~l~~~G~iv~~g~~~~-~~~~~~~~~~~~~~~i~g~~~~~~~~~~  308 (360)
T 1piw_A          237 GEKY-------FDTFDLIVVCASSLTDIDFNIMPKAMKVGGRIVSISIPEQ-HEMLSLKPYGLKAVSISYSALGSIKELN  308 (360)
T ss_dssp             HHHS-------CSCEEEEEECCSCSTTCCTTTGGGGEEEEEEEEECCCCCS-SCCEEECGGGCBSCEEEECCCCCHHHHH
T ss_pred             HHHh-------hcCCCEEEECCCCCcHHHHHHHHHHhcCCCEEEEecCCCC-ccccCHHHHHhCCeEEEEEecCCHHHHH
Confidence            3332       2489999999997  5778899999999999999986544 3 45555678899999998765 56799


Q ss_pred             HHHHHHHcCCCCCCCceEEEeeCChhh--HHHHHHHHhcCCCceEEEEeC
Q 017916          317 LCLELLRSGKIDVKPLVTHRFGFSQKE--VEEAFETSARGGTAIKVMFNL  364 (364)
Q Consensus       317 ~~~~~l~~g~~~~~~~~~~~~~~~~~~--~~~a~~~~~~~~~~gkvvv~~  364 (364)
                      ++++++++|++  ++.+ ++|+|  ++  +++|++.++++...||+|+++
T Consensus       309 ~~~~l~~~g~l--~~~i-~~~~l--~~~~~~~A~~~~~~~~~~gKvvi~~  353 (360)
T 1piw_A          309 QLLKLVSEKDI--KIWV-ETLPV--GEAGVHEAFERMEKGDVRYRFTLVG  353 (360)
T ss_dssp             HHHHHHHHTTC--CCCE-EEEES--SHHHHHHHHHHHHHTCCSSEEEEEC
T ss_pred             HHHHHHHhCCC--cceE-EEEec--cHhHHHHHHHHHHCCCCceEEEEec
Confidence            99999999998  5666 89999  88  999999999988899999874

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}

Probab=100.00  E-value=5.3e-53  Score=389.54  Aligned_cols=334  Identities=28%  Similarity=0.468  Sum_probs=290.9

Q ss_pred             ceeEEEecCC---ceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCCCCCC
Q 017916           18 NMAAWLLGVN---TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT   94 (364)
Q Consensus        18 ~~~~~~~~~~---~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~   94 (364)
                      |+++++.++.   .+++.+.|.|+++++||+|||++++||++|++.+.|.+..  ...+|.++|||++|+|+++|++|++
T Consensus         1 Mka~~~~~~g~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~--~~~~p~v~G~E~~G~V~~vG~~v~~   78 (343)
T 2eih_A            1 MRAVVMRARGGPEVLEVADLPVPEPGPKEVRVRLKAAALNHLDVWVRKGVASP--KLPLPHVLGADGSGVVDAVGPGVEG   78 (343)
T ss_dssp             CEEEEECSSSSGGGEEEEECCCCCCCTTEEEEEEEEEECCHHHHHHHHTSSST--TCCSSEECCSEEEEEEEEECSSCCS
T ss_pred             CeEEEEecCCCCceEEEEecCCCCCCCCEEEEEEEEEEeCHHHHHHhcCCCCC--CCCCCcccccceEEEEEEECCCCCC
Confidence            5778877654   4999999999999999999999999999999998875421  1367999999999999999999999


Q ss_pred             CCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCccchhhh-hhhHHHHHH
Q 017916           95 LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMC-EPLSVGLHA  173 (364)
Q Consensus        95 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~lP~~~~~~~aa~~-~~~~~a~~~  173 (364)
                      |++||+|+..+..+|..|.+|+.++.++|.+..+.+. ..+|+|+||+++++++++++|+++++++|+++ .++.|||++
T Consensus        79 ~~vGdrV~~~~~~~cg~c~~C~~g~~~~C~~~~~~G~-~~~G~~aey~~v~~~~~~~~P~~~~~~~aa~l~~~~~ta~~a  157 (343)
T 2eih_A           79 FAPGDEVVINPGLSCGRCERCLAGEDNLCPRYQILGE-HRHGTYAEYVVLPEANLAPKPKNLSFEEAAAIPLTFLTAWQM  157 (343)
T ss_dssp             CCTTCEEEECCEECCSCSHHHHTTCGGGCTTCEETTT-SSCCSSBSEEEEEGGGEEECCTTSCHHHHHHSHHHHHHHHHH
T ss_pred             CCCCCEEEECCCCCcccchhhccCcccccccccccCc-CCCccceeEEEeChHHeEECCCCCCHHHHhhchhhHHHHHHH
Confidence            9999999999989999999999999999999876653 45799999999999999999999999999855 589999999


Q ss_pred             HHH-cCCCCCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHc
Q 017916          174 CRR-ANIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAM  251 (364)
Q Consensus       174 l~~-~~~~~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~  251 (364)
                      +.. +++++|++|||+|+ |++|++++|+|+..|+ .|+++++++++.++++++|++.++++..  +++.+.+++..  .
T Consensus       158 l~~~~~~~~g~~vlV~Gasg~iG~~~~~~a~~~G~-~Vi~~~~~~~~~~~~~~~ga~~~~d~~~--~~~~~~~~~~~--~  232 (343)
T 2eih_A          158 VVDKLGVRPGDDVLVMAAGSGVSVAAIQIAKLFGA-RVIATAGSEDKLRRAKALGADETVNYTH--PDWPKEVRRLT--G  232 (343)
T ss_dssp             HTTTSCCCTTCEEEECSTTSTTHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHTCSEEEETTS--TTHHHHHHHHT--T
T ss_pred             HHHhcCCCCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhcCCCEEEcCCc--ccHHHHHHHHh--C
Confidence            966 79999999999998 9999999999999999 7888889999999999999998887643  46666666553  2


Q ss_pred             CCCccEEEECCCCHHHHHHHHHhcccCCEEEEEcCCCCC-ccccchhhhhcCcEEEeeccC-CCcHHHHHHHHHcCCCCC
Q 017916          252 GTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHE-MTVPLTPAAVREVDVVGVFRY-KNTWPLCLELLRSGKIDV  329 (364)
Q Consensus       252 ~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~g~~~~  329 (364)
                      +.++|++||++| .+.++.++++|+++|+++.+|..... ..++...++.+++++.+.... .+.++++++++++|++  
T Consensus       233 ~~~~d~vi~~~g-~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~g~l--  309 (343)
T 2eih_A          233 GKGADKVVDHTG-ALYFEGVIKATANGGRIAIAGASSGYEGTLPFAHVFYRQLSILGSTMASKSRLFPILRFVEEGKL--  309 (343)
T ss_dssp             TTCEEEEEESSC-SSSHHHHHHHEEEEEEEEESSCCCSCCCCCCTTHHHHTTCEEEECCSCCGGGHHHHHHHHHHTSS--
T ss_pred             CCCceEEEECCC-HHHHHHHHHhhccCCEEEEEecCCCCcCccCHHHHHhCCcEEEEecCccHHHHHHHHHHHHcCCC--
Confidence            458999999999 67889999999999999999865433 235556677899999998654 6789999999999998  


Q ss_pred             CCceEEEeeCChhhHHHHHHHHhcCCCceEEEEeC
Q 017916          330 KPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  364 (364)
Q Consensus       330 ~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  364 (364)
                      ++.++++|+|  +++++||+.++++...||+|+++
T Consensus       310 ~~~i~~~~~l--~~~~~A~~~~~~~~~~gKvvv~~  342 (343)
T 2eih_A          310 KPVVGQVLPL--EAAAEGHRLLEERRVFGKVVLQV  342 (343)
T ss_dssp             CCCEEEEEEG--GGHHHHHHHHHTTCSSSEEEEEC
T ss_pred             CCceeEEeeH--HHHHHHHHHHHcCCCceEEEEec
Confidence            6788899999  99999999999988899999874

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*

Probab=100.00  E-value=1.6e-52  Score=386.98  Aligned_cols=335  Identities=29%  Similarity=0.428  Sum_probs=291.3

Q ss_pred             ceeEEEecC-CceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccC-----CccCCCCcccccceeEEEEEeCCC
Q 017916           18 NMAAWLLGV-NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCA-----DFVVKEPMVIGHECAGVIEKVGSE   91 (364)
Q Consensus        18 ~~~~~~~~~-~~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~-----~~~~~~p~~~G~e~~G~V~~vG~~   91 (364)
                      |+++++.++ ..+++.+.|.|+++++||+|||+++++|++|++.+.|.+..     .....+|.++|||++|+|+++|++
T Consensus         1 Mka~~~~~~g~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~   80 (347)
T 1jvb_A            1 MRAVRLVEIGKPLSLQEIGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHEIAGKIEEVGDE   80 (347)
T ss_dssp             CEEEEECSTTSCCEEEECCCCCCCTTCEEEEEEEEEECTHHHHHTTTEETTEETTTTTCCCSCEECCCEEEEEEEEECTT
T ss_pred             CeEEEEecCCCCeEEEEeeCCCCCCCeEEEEEEEEEecHHHHHHhcCCCcccccccccCCCCCccccccceEEEEEECCC
Confidence            578888876 47999999999999999999999999999999998875431     012367999999999999999999


Q ss_pred             CCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecC-CceEECCCCCCccchhhhh-hhHH
Q 017916           92 VKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPA-DLCFKLPDNVSLEEGAMCE-PLSV  169 (364)
Q Consensus        92 v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~-~~~~~lP~~~~~~~aa~~~-~~~~  169 (364)
                      |++|++||+|++.+..+|..|.+|+.+++++|.+....+. ..+|+|+||+++++ ++++++ +++++++|+.++ .+.|
T Consensus        81 v~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~G~-~~~G~~aey~~v~~~~~~~~i-~~~~~~~aa~l~~~~~t  158 (347)
T 1jvb_A           81 VVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPRWLGI-NFDGAYAEYVIVPHYKYMYKL-RRLNAVEAAPLTCSGIT  158 (347)
T ss_dssp             CCSCCTTCEEEECCEECCSSSHHHHTTCGGGCSSCEEBTT-TBCCSSBSEEEESCGGGEEEC-SSSCHHHHGGGGTHHHH
T ss_pred             CCCCCCCCEEEeCCCCCCCCChhhhCcCcccCcccccccc-cCCCcceeEEEecCccceEEe-CCCCHHHcccchhhHHH
Confidence            9999999999998888999999999999999998876653 56799999999999 999999 999999988665 7889


Q ss_pred             HHHHHHHcCCCCCCEEEEEcC-CHHHHHHHHHHHHC-CCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHH
Q 017916          170 GLHACRRANIGPETNVLIMGA-GPIGLVTMLGARAF-GAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKI  247 (364)
Q Consensus       170 a~~~l~~~~~~~g~~VLI~Ga-g~~G~~ai~la~~~-g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~  247 (364)
                      ||++++++++++|++|||+|+ |++|++++|+|+.. |+ .|++++.++++.++++++|++.++++.+  .++.+.++++
T Consensus       159 a~~~l~~~~~~~g~~vlV~Gagg~iG~~~~~~a~~~~Ga-~Vi~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~~~~~~  235 (347)
T 1jvb_A          159 TYRAVRKASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGA-TIIGVDVREEAVEAAKRAGADYVINASM--QDPLAEIRRI  235 (347)
T ss_dssp             HHHHHHHTTCCTTCEEEEETTTSHHHHHHHHHHHHHTCC-EEEEEESSHHHHHHHHHHTCSEEEETTT--SCHHHHHHHH
T ss_pred             HHHHHHhcCCCCCCEEEEECCCccHHHHHHHHHHHcCCC-eEEEEcCCHHHHHHHHHhCCCEEecCCC--ccHHHHHHHH
Confidence            999998899999999999998 69999999999999 99 6888888999999999999998887654  5666666555


Q ss_pred             HHHcCCCccEEEECCCCHHHHHHHHHhcccCCEEEEEcCCC-CCccccchhhhhcCcEEEeeccC-CCcHHHHHHHHHcC
Q 017916          248 QKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGH-HEMTVPLTPAAVREVDVVGVFRY-KNTWPLCLELLRSG  325 (364)
Q Consensus       248 ~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~g  325 (364)
                      ..  .+++|++||++|....++.++++|+++|+++.+|... .. .++...+..+++++.+.... .+.++++++++++|
T Consensus       236 ~~--~~~~d~vi~~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~-~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g  312 (347)
T 1jvb_A          236 TE--SKGVDAVIDLNNSEKTLSVYPKALAKQGKYVMVGLFGADL-HYHAPLITLSEIQFVGSLVGNQSDFLGIMRLAEAG  312 (347)
T ss_dssp             TT--TSCEEEEEESCCCHHHHTTGGGGEEEEEEEEECCSSCCCC-CCCHHHHHHHTCEEEECCSCCHHHHHHHHHHHHTT
T ss_pred             hc--CCCceEEEECCCCHHHHHHHHHHHhcCCEEEEECCCCCCC-CCCHHHHHhCceEEEEEeccCHHHHHHHHHHHHcC
Confidence            31  1489999999998778899999999999999998654 43 55555677899999998765 56799999999999


Q ss_pred             CCCCCCceEEEeeCChhhHHHHHHHHhcCCCceEEEEeC
Q 017916          326 KIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  364 (364)
Q Consensus       326 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  364 (364)
                      ++  ++.++++|+|  +++++|++.++++...||+|+++
T Consensus       313 ~l--~~~i~~~~~l--~~~~~A~~~~~~~~~~gKvvl~~  347 (347)
T 1jvb_A          313 KV--KPMITKTMKL--EEANEAIDNLENFKAIGRQVLIP  347 (347)
T ss_dssp             SS--CCCCEEEEEG--GGHHHHHHHHHTTCCCSEEEEEC
T ss_pred             CC--CceEEEEEcH--HHHHHHHHHHHCCCCcceEEecC
Confidence            98  6778899999  99999999999998899999975

>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}

Probab=100.00  E-value=2.1e-53  Score=399.77  Aligned_cols=336  Identities=23%  Similarity=0.417  Sum_probs=286.7

Q ss_pred             cceeEEEecCCceEEEEecCCCC-CC-----CcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCC
Q 017916           17 VNMAAWLLGVNTLKIQPFELPSL-GP-----YDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGS   90 (364)
Q Consensus        17 ~~~~~~~~~~~~~~~~~~~~p~~-~~-----~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~   90 (364)
                      +|+++++.++..+++.++|.|++ ++     +||+|||.+++||++|++.+.|.+    ...+|.++|||++|+|+++|+
T Consensus         2 ~MkA~~~~~~~~l~~~~~p~P~~~~~~~~~~~eVlVkv~a~gic~~D~~~~~G~~----~~~~p~v~GhE~~G~V~~vG~   77 (398)
T 2dph_A            2 GNKSVVYHGTRDLRVETVPYPKLEHNNRKLEHAVILKVVSTNICGSDQHIYRGRF----IVPKGHVLGHEITGEVVEKGS   77 (398)
T ss_dssp             CEEEEEEEETTEEEEEEECCCCSEETTEECTTCEEEEEEEEECCHHHHHHHTTSS----CCCTTCBCCCCEEEEEEEECT
T ss_pred             ccEEEEEEcCCCEEEEEccCCCCCCCcCCCCCeEEEEEEEEeecHHHHHHhcCCC----CCCCCcccCCceEEEEEEECC
Confidence            47889999889999999999997 68     999999999999999999988742    246799999999999999999


Q ss_pred             CCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCC--cc------cccc--CCCCCcceeEEEecCC--ceEECCCCCCc
Q 017916           91 EVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPE--MK------FFAT--PPVHGSLANQVVHPAD--LCFKLPDNVSL  158 (364)
Q Consensus        91 ~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~--~~------~~~~--~~~~g~~~~~v~~~~~--~~~~lP~~~~~  158 (364)
                      +|++|++||+|++.+...|..|.+|+.++.++|.+  ..      .++.  ...+|+|+||++++++  +++++|+++++
T Consensus        78 ~v~~~~vGDrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~~G~~~~~~~G~~aey~~v~~~~~~~~~iP~~~~~  157 (398)
T 2dph_A           78 DVELMDIGDLVSVPFNVACGRCRNCKEARSDVCENNLVNPDADLGAFGFDLKGWSGGQAEYVLVPYADYMLLKFGDKEQA  157 (398)
T ss_dssp             TCCSCCTTCEEECCSBCCCSCSHHHHTTCGGGCCCTTTCSSSSCCBTTTTBSSCCCSSBSEEEESSHHHHCEECSSHHHH
T ss_pred             CCCCCCCCCEEEEcCCCCCCCChhhhCcCcccCCCccccccccccccccccCCCCceeeeeEEeccccCeEEECCCCCCh
Confidence            99999999999999999999999999999999987  21      1221  1357999999999987  89999999998


Q ss_pred             cc----hhhhh-hhHHHHHHHHHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEec
Q 017916          159 EE----GAMCE-PLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKV  233 (364)
Q Consensus       159 ~~----aa~~~-~~~~a~~~l~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~  233 (364)
                      ++    |+++. ++.|||++++.+++++|++|||+|+|++|++++|+|+.+|++.|++++.+++|.++++++|++ ++++
T Consensus       158 ~~~~~~aa~l~~~~~ta~~al~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~-~i~~  236 (398)
T 2dph_A          158 MEKIKDLTLISDILPTGFHGCVSAGVKPGSHVYIAGAGPVGRCAAAGARLLGAACVIVGDQNPERLKLLSDAGFE-TIDL  236 (398)
T ss_dssp             HHTHHHHTTTTTHHHHHHHHHHHTTCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHTTTCE-EEET
T ss_pred             hhhcchhhhhcCHHHHHHHHHHHcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCc-EEcC
Confidence            87    66664 899999999889999999999999999999999999999997789999999999999999995 7776


Q ss_pred             CCCcccH-HHHHHHHHHHcCCCccEEEECCCCH--------------HHHHHHHHhcccCCEEEEEcCCC----------
Q 017916          234 STNLQDI-AEEVEKIQKAMGTGIDVSFDCAGFN--------------KTMSTALSATRAGGKVCLVGMGH----------  288 (364)
Q Consensus       234 ~~~~~~~-~~~i~~~~~~~~~~~d~vid~~g~~--------------~~~~~~~~~l~~~G~~v~~g~~~----------  288 (364)
                      ..  +++ .+.+++++  .+.++|++|||+|..              ..+..++++|+++|+++.+|...          
T Consensus       237 ~~--~~~~~~~~~~~~--~g~g~Dvvid~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~gG~iv~~G~~~~~~~~~~~~~  312 (398)
T 2dph_A          237 RN--SAPLRDQIDQIL--GKPEVDCGVDAVGFEAHGLGDEANTETPNGALNSLFDVVRAGGAIGIPGIYVGSDPDPVNKD  312 (398)
T ss_dssp             TS--SSCHHHHHHHHH--SSSCEEEEEECSCTTCBCSGGGTTSBCTTHHHHHHHHHEEEEEEEECCSCCCSCCSSCSSHH
T ss_pred             CC--cchHHHHHHHHh--CCCCCCEEEECCCCccccccccccccccHHHHHHHHHHHhcCCEEEEecccccccccccccc
Confidence            43  454 67776664  245899999999964              37889999999999999998641          


Q ss_pred             ---CCccccchhhhhcCcEEEeeccC-CCcHHHHHHHHHcCCCC--CCCceEEEeeCChhhHHHHHHHHhcCCCceEEEE
Q 017916          289 ---HEMTVPLTPAAVREVDVVGVFRY-KNTWPLCLELLRSGKID--VKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMF  362 (364)
Q Consensus       289 ---~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~g~~~--~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv  362 (364)
                         ....++...++.+++++.+.... .+.++++++++++|++.  +.+.++++|+|  +++++|++.++++.. ||+|+
T Consensus       313 ~~~~~~~~~~~~~~~k~~~i~g~~~~~~~~~~~~~~l~~~g~l~~~~~~~i~~~~~l--~~~~~A~~~~~~~~~-gKvvv  389 (398)
T 2dph_A          313 AGSGRLHLDFGKMWTKSIRIMTGMAPVTNYNRHLTEAILWDQMPYLSKVMNIEVITL--DQAPDGYAKFDKGSP-AKFVI  389 (398)
T ss_dssp             HHTTEEEEEHHHHHHTTCEEECSSCCGGGTHHHHHHHHHTTCCHHHHHHHCEEEECS--TTHHHHHHHHHTTCS-CEEEE
T ss_pred             ccCCcccccHHHHhhcCCEEEEeccCcHHHHHHHHHHHHcCCCCccchhhEEEEEcH--HHHHHHHHHHhcCCc-eEEEE
Confidence               12234445677899999887654 56799999999999995  44578899999  999999999998877 99998


Q ss_pred             eC
Q 017916          363 NL  364 (364)
Q Consensus       363 ~~  364 (364)
                      ++
T Consensus       390 ~~  391 (398)
T 2dph_A          390 DP  391 (398)
T ss_dssp             CT
T ss_pred             ec
Confidence            74

>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}

Probab=100.00  E-value=3.4e-53  Score=398.89  Aligned_cols=336  Identities=25%  Similarity=0.428  Sum_probs=288.3

Q ss_pred             hcceeEEEecCCceEEEEecCCC-CCCCcEEEEEeeeeeCcccHhhhhhcccCC----ccCCCCcccccceeEEEEEeCC
Q 017916           16 EVNMAAWLLGVNTLKIQPFELPS-LGPYDVLVRMKAVGICGSDVHYLKTLRCAD----FVVKEPMVIGHECAGVIEKVGS   90 (364)
Q Consensus        16 ~~~~~~~~~~~~~~~~~~~~~p~-~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~----~~~~~p~~~G~e~~G~V~~vG~   90 (364)
                      .+|+++++..+..+++.++|.|+ ++++||+|||.+++||++|++.+.|...+.    ....+|.++|||++|+|+++|+
T Consensus        29 ~~m~a~~~~~~~~l~~~~~~~P~~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~~~~~P~i~G~E~~G~V~~vG~  108 (404)
T 3ip1_A           29 LTWLGSKVWRYPEVRVEEVPEPRIEKPTEIIIKVKACGICGSDVHMAQTDEEGYILYPGLTGFPVTLGHEFSGVVVEAGP  108 (404)
T ss_dssp             BBSCGGGTEEEEEEEEEEECCCCCCSTTEEEEEEEEEECCHHHHHHHCBCTTSBBSCCSCBCSSEECCCEEEEEEEEECT
T ss_pred             hhcceEEEEeCCceEEEEcCCCCCCCcCEEEEEEeEeeeCHHHHHHhcCCCCccccccccCCCCcccCccceEEEEEECC
Confidence            34555555555589999999999 999999999999999999999987643221    1246799999999999999999


Q ss_pred             CC------CCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCc------
Q 017916           91 EV------KTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSL------  158 (364)
Q Consensus        91 ~v------~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~lP~~~~~------  158 (364)
                      +|      ++|++||+|++.+..+|..|.+|+.++.++|.+....+. ..+|+|+||+++++++++++|+++++      
T Consensus       109 ~v~~~~~~~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~g~-~~~G~~aey~~v~~~~~~~iP~~~~~~~~~~~  187 (404)
T 3ip1_A          109 EAINRRTNKRFEIGEPVCAEEMLWCGHCRPCAEGFPNHCENLNELGF-NVDGAFAEYVKVDAKYAWSLRELEGVYEGDRL  187 (404)
T ss_dssp             TCEETTTTEECCTTCEEEECSEECCSCSHHHHTTCGGGCTTCEEBTT-TBCCSSBSEEEEEGGGEEECGGGBTTBCTHHH
T ss_pred             CccccccCCCCCCCCEEEECCccCCCCCHHHHCcCcccCccccccCC-CCCCCCcceEEechHHeEeccccccccccccc
Confidence            99      899999999999999999999999999999999887764 57899999999999999999998753      


Q ss_pred             cchh-hhhhhHHHHHHHH-H-cCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCC
Q 017916          159 EEGA-MCEPLSVGLHACR-R-ANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVST  235 (364)
Q Consensus       159 ~~aa-~~~~~~~a~~~l~-~-~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~  235 (364)
                      .+++ +..+++|||+++. . +++++|++|||+|+|++|++++|+|+.+|++.|++++.+++|.++++++|+++++++..
T Consensus       188 ~~aa~l~~~~~ta~~al~~~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~  267 (404)
T 3ip1_A          188 FLAGSLVEPTSVAYNAVIVRGGGIRPGDNVVILGGGPIGLAAVAILKHAGASKVILSEPSEVRRNLAKELGADHVIDPTK  267 (404)
T ss_dssp             HHHHHTHHHHHHHHHHHTTTSCCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHTCSEEECTTT
T ss_pred             hhHHhhhhHHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCCEEEcCCC
Confidence            3344 4458999999994 3 58999999999999999999999999999988999999999999999999999988643


Q ss_pred             CcccHHHHHHHHHHHcCCCccEEEECCCCH-HHHHHHHHhc----ccCCEEEEEcCCCCCccccchhhhhcCcEEEeecc
Q 017916          236 NLQDIAEEVEKIQKAMGTGIDVSFDCAGFN-KTMSTALSAT----RAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFR  310 (364)
Q Consensus       236 ~~~~~~~~i~~~~~~~~~~~d~vid~~g~~-~~~~~~~~~l----~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~  310 (364)
                        +++.+.+++++  .+.++|++|||+|++ ..+..++++|    +++|+++.+|.......++...+..+++++.+...
T Consensus       268 --~~~~~~i~~~t--~g~g~D~vid~~g~~~~~~~~~~~~l~~~~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~i~g~~~  343 (404)
T 3ip1_A          268 --ENFVEAVLDYT--NGLGAKLFLEATGVPQLVWPQIEEVIWRARGINATVAIVARADAKIPLTGEVFQVRRAQIVGSQG  343 (404)
T ss_dssp             --SCHHHHHHHHT--TTCCCSEEEECSSCHHHHHHHHHHHHHHCSCCCCEEEECSCCCSCEEECHHHHHHTTCEEEECCC
T ss_pred             --CCHHHHHHHHh--CCCCCCEEEECCCCcHHHHHHHHHHHHhccCCCcEEEEeCCCCCCCcccHHHHhccceEEEEecC
Confidence              67888887764  356899999999976 3666777777    99999999997766667777788899999999875


Q ss_pred             C--CCcHHHHHHHHHcCCCCCCCceEEEeeCChhhHHHHHHHHhcCCCceEEEEe
Q 017916          311 Y--KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFN  363 (364)
Q Consensus       311 ~--~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~  363 (364)
                      .  ...++++++++++| +.+.+.++++|+|  +++++|++.++    .||+|++
T Consensus       344 ~~~~~~~~~~~~ll~~g-l~~~~~i~~~~~l--~~~~~A~~~~~----~GKvvl~  391 (404)
T 3ip1_A          344 HSGHGTFPRVISLMASG-MDMTKIISKTVSM--EEIPEYIKRLQ----TDKSLVK  391 (404)
T ss_dssp             CCSTTHHHHHHHHHHTT-CCGGGGCCEEECG--GGHHHHHHHTT----TCTTCSC
T ss_pred             CCchHHHHHHHHHHHcC-CChhheEEEEeeH--HHHHHHHHHHh----CCcEEEe
Confidence            4  67899999999999 8777888999999  99999999987    4677765

>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*

Probab=100.00  E-value=6.7e-54  Score=397.54  Aligned_cols=327  Identities=20%  Similarity=0.301  Sum_probs=284.1

Q ss_pred             ceeEEEecCCc-eEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCC---CcccccceeEEEEEeCCCCC
Q 017916           18 NMAAWLLGVNT-LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKE---PMVIGHECAGVIEKVGSEVK   93 (364)
Q Consensus        18 ~~~~~~~~~~~-~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~---p~~~G~e~~G~V~~vG~~v~   93 (364)
                      |+++++.++.. +++.+.|.|+++++||+|||++++||++|++++.|.+..   ..+   |.++|||++| |+++|++ +
T Consensus         1 MkA~~~~~~~~~l~~~~~p~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~---~~~~~~p~v~G~E~~G-V~~vG~~-~   75 (357)
T 2b5w_A            1 MKAIAVKRGEDRPVVIEKPRPEPESGEALVRTLRVGVCGTDHEVIAGGHGG---FPEGEDHLVLGHEAVG-VVVDPND-T   75 (357)
T ss_dssp             CEEEEEETTCSSCEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHSCSTT---SCTTCSEEECCSEEEE-EEEECTT-S
T ss_pred             CeEEEEeCCCCceEEEECCCCCCCcCEEEEEEeEEeechhcHHHHcCCCCC---CCCCCCCcccCceeEE-EEEECCC-C
Confidence            57888887766 999999999999999999999999999999999875421   345   8999999999 9999999 9


Q ss_pred             CCCCCCEEEEcCCcC--CCCCccccCCCCCCCCCcccc--ccCCCCCcceeEEEecCCceEECCCCCCccchhhhhhhHH
Q 017916           94 TLVPGDRVALEPGIS--CWRCDHCKGGRYNLCPEMKFF--ATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSV  169 (364)
Q Consensus        94 ~~~~Gd~V~~~~~~~--~~~~~~~~~~~~~~~~~~~~~--~~~~~~g~~~~~v~~~~~~~~~lP~~~~~~~aa~~~~~~~  169 (364)
                      +|++||||++.+...  |..|.+|+.++.++|.+..+.  +....+|+|+||+++++++++++|++++ ++|++..+++|
T Consensus        76 ~~~vGdrV~~~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~g~~~~~G~~aey~~v~~~~~~~iP~~~~-~~aal~~~~~t  154 (357)
T 2b5w_A           76 ELEEGDIVVPTVRRPPASGTNEYFERDQPDMAPDGMYFERGIVGAHGYMSEFFTSPEKYLVRIPRSQA-ELGFLIEPISI  154 (357)
T ss_dssp             SCCTTCEEEECSEECCTTCCCHHHHTTCGGGCCTTSCEEETTBEECCSCBSEEEEEGGGEEECCGGGS-TTGGGHHHHHH
T ss_pred             CCCCCCEEEECCcCCCCCCCChHHhCcCcccCCCCcccccCccCCCcceeeEEEEchHHeEECCCCcc-hhhhhhchHHH
Confidence            999999999988777  999999999999999998765  3223579999999999999999999999 77776679999


Q ss_pred             HHHHHHHcCCCCC------CEEEEEcCCHHHHHH-HHHH-HHCCCCEEEEEecChh---HHHHHHHcCCCeEEecCCCcc
Q 017916          170 GLHACRRANIGPE------TNVLIMGAGPIGLVT-MLGA-RAFGAPRIVIVDVDDY---RLSVAKELGADNIVKVSTNLQ  238 (364)
Q Consensus       170 a~~~l~~~~~~~g------~~VLI~Gag~~G~~a-i~la-~~~g~~~vv~~~~~~~---~~~~~~~lg~~~~~~~~~~~~  238 (364)
                      ||++++.+++++|      ++|||+|+|++|+++ +|+| +.+|++.|++++++++   |.++++++|++++ ++.+  +
T Consensus       155 a~~al~~~~~~~g~~~~~~~~VlV~GaG~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~~~~~lGa~~v-~~~~--~  231 (357)
T 2b5w_A          155 TEKALEHAYASRSAFDWDPSSAFVLGNGSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDIIEELDATYV-DSRQ--T  231 (357)
T ss_dssp             HHHHHHHHHHTTTTSCCCCCEEEEECCSHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHHHHHHTTCEEE-ETTT--S
T ss_pred             HHHHHHhcCCCCCcccCCCCEEEEECCCHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHHHHHHcCCccc-CCCc--c
Confidence            9999988889999      999999999999999 9999 9999976888988888   9999999999988 7653  5


Q ss_pred             cHHHHHHHHHHHcCCCccEEEECCCCHHHHHHHHHhcccCCEEEEEcCCC-CCccccchhh----hhcCcEEEeeccC-C
Q 017916          239 DIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGH-HEMTVPLTPA----AVREVDVVGVFRY-K  312 (364)
Q Consensus       239 ~~~~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~-~~~~~~~~~~----~~~~~~~~~~~~~-~  312 (364)
                      ++.+ ++++   .+ ++|++|||+|....+..++++|+++|+++.+|... ....++...+    +.+++++.+.... .
T Consensus       232 ~~~~-i~~~---~g-g~Dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~  306 (357)
T 2b5w_A          232 PVED-VPDV---YE-QMDFIYEATGFPKHAIQSVQALAPNGVGALLGVPSDWAFEVDAGAFHREMVLHNKALVGSVNSHV  306 (357)
T ss_dssp             CGGG-HHHH---SC-CEEEEEECSCCHHHHHHHHHHEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHTTCEEEECCCCCH
T ss_pred             CHHH-HHHh---CC-CCCEEEECCCChHHHHHHHHHHhcCCEEEEEeCCCCCCceecHHHHhHHHHhCCeEEEEeccCCH
Confidence            6666 6655   24 89999999998778999999999999999998654 4445555556    7899999998765 5


Q ss_pred             CcHHHHHHHHHcC--CCCCCCceEEEeeCChhhHHHHHHHHhcCCCceEEEEeC
Q 017916          313 NTWPLCLELLRSG--KIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  364 (364)
Q Consensus       313 ~~~~~~~~~l~~g--~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  364 (364)
                      +.++++++++++|  ++ +++.++++|+|  +++++|++.+   ...||+|+++
T Consensus       307 ~~~~~~~~l~~~g~~~~-~~~~i~~~~~l--~~~~~A~~~~---~~~gKvvi~~  354 (357)
T 2b5w_A          307 EHFEAATVTFTKLPKWF-LEDLVTGVHPL--SEFEAAFDDD---DTTIKTAIEF  354 (357)
T ss_dssp             HHHHHHHHHHHHSCHHH-HHHHEEEEEEG--GGGGGGGCCS---TTCCEEEEEC
T ss_pred             HHHHHHHHHHHhCchhh-hhhhcceeecH--HHHHHHHHHh---CCCceEEEEe
Confidence            6799999999999  84 47888899999  9999999988   3578999875

>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=1.4e-52  Score=394.36  Aligned_cols=337  Identities=23%  Similarity=0.403  Sum_probs=284.1

Q ss_pred             cceeEEEecCCceEEEEecCCCCC-CCc------EEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeC
Q 017916           17 VNMAAWLLGVNTLKIQPFELPSLG-PYD------VLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVG   89 (364)
Q Consensus        17 ~~~~~~~~~~~~~~~~~~~~p~~~-~~~------VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG   89 (364)
                      +|+++++.++..+++.+.|.|+++ ++|      |+|||++++||++|++.+.|.+    ...+|.++|||++|+|+++|
T Consensus         2 ~Mka~~~~~~~~l~~~~~p~P~~~~~~e~~~~~eVlVkv~a~gi~~~D~~~~~g~~----~~~~p~v~GhE~~G~V~~vG   77 (398)
T 1kol_A            2 GNRGVVYLGSGKVEVQKIDYPKMQDPRGKKIEHGVILKVVSTNICGSDQHMVRGRT----TAQVGLVLGHEITGEVIEKG   77 (398)
T ss_dssp             CEEEEEEEETTEEEEEEECCCCSBCTTSCBCSSCEEEEEEEEECCHHHHHHHTTCS----CCCTTCBCCCCEEEEEEEEC
T ss_pred             ccEEEEEecCCceEEEEecCCCCCCCCcccccceEEEEEEEEeechhhHHHHcCCC----CCCCCcccCcccEEEEEEEC
Confidence            478888888889999999999997 898      9999999999999999988743    23578999999999999999


Q ss_pred             CCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCcc------cccc---CCCCCcceeEEEecCC--ceEECCCCCCc
Q 017916           90 SEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMK------FFAT---PPVHGSLANQVVHPAD--LCFKLPDNVSL  158 (364)
Q Consensus        90 ~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~---~~~~g~~~~~v~~~~~--~~~~lP~~~~~  158 (364)
                      ++|++|++||+|++.+..+|..|++|+.++.++|.+..      .++.   ....|+|+||++++++  +++++|+++++
T Consensus        78 ~~v~~~~vGDrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~g~~~~~~~~G~~aey~~v~~~~~~~~~~P~~~~~  157 (398)
T 1kol_A           78 RDVENLQIGDLVSVPFNVACGRCRSCKEMHTGVCLTVNPARAGGAYGYVDMGDWTGGQAEYVLVPYADFNLLKLPDRDKA  157 (398)
T ss_dssp             TTCCSCCTTCEEECCSEECCSSSHHHHTTCGGGCSSSCSSSSCEEBTCTTSCCBCCCSBSEEEESSHHHHCEECSCHHHH
T ss_pred             CCCCcCCCCCEEEECCcCCCCCChHHhCcCcccCCCcccccccceeeeccCCCCCceeeeEEEecchhCeEEECCCCcch
Confidence            99999999999999888899999999999999999764      1221   1356999999999987  89999999988


Q ss_pred             cc----hhhhh-hhHHHHHHHHHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEec
Q 017916          159 EE----GAMCE-PLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKV  233 (364)
Q Consensus       159 ~~----aa~~~-~~~~a~~~l~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~  233 (364)
                      ++    ++.+. ++.|||++++.+++++|++|||+|+|++|++++|+|+++|+++|++++.+++|.++++++|++ ++++
T Consensus       158 ~~~~~~aa~l~~~~~ta~~al~~~~~~~g~~VlV~GaG~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~~~a~~lGa~-~i~~  236 (398)
T 1kol_A          158 MEKIRDLTCLSDILPTGYHGAVTAGVGPGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLNPARLAHAKAQGFE-IADL  236 (398)
T ss_dssp             HHTHHHHGGGGTHHHHHHHHHHHTTCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCE-EEET
T ss_pred             hhhcccccccccHHHHHHHHHHHcCCCCCCEEEEECCcHHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHcCCc-EEcc
Confidence            77    55554 889999999889999999999999999999999999999998889999999999999999997 6776


Q ss_pred             CCCcccHHHHHHHHHHHcCCCccEEEECCCCH---------------HHHHHHHHhcccCCEEEEEcCC-C-C-------
Q 017916          234 STNLQDIAEEVEKIQKAMGTGIDVSFDCAGFN---------------KTMSTALSATRAGGKVCLVGMG-H-H-------  289 (364)
Q Consensus       234 ~~~~~~~~~~i~~~~~~~~~~~d~vid~~g~~---------------~~~~~~~~~l~~~G~~v~~g~~-~-~-------  289 (364)
                      ... .++.+.+++++  .+.++|++|||+|..               ..++.++++|+++|+++.+|.. . .       
T Consensus       237 ~~~-~~~~~~v~~~t--~g~g~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~  313 (398)
T 1kol_A          237 SLD-TPLHEQIAALL--GEPEVDCAVDAVGFEARGHGHEGAKHEAPATVLNSLMQVTRVAGKIGIPGLYVTEDPGAVDAA  313 (398)
T ss_dssp             TSS-SCHHHHHHHHH--SSSCEEEEEECCCTTCBCSSTTGGGSBCTTHHHHHHHHHEEEEEEEEECSCCCSCCTTCSSHH
T ss_pred             CCc-chHHHHHHHHh--CCCCCCEEEECCCCcccccccccccccchHHHHHHHHHHHhcCCEEEEeccccCCcccccccc
Confidence            432 34677777664  256899999999964               3788999999999999999854 1 1       


Q ss_pred             ----CccccchhhhhcCcEEEeeccC-CCcHHHHHHHHHcCCCC-CCCceEEEeeCChhhHHHHHHHHhcCCCceEEEEe
Q 017916          290 ----EMTVPLTPAAVREVDVVGVFRY-KNTWPLCLELLRSGKID-VKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFN  363 (364)
Q Consensus       290 ----~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~g~~~-~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~  363 (364)
                          ...++...++.+++++.+.... .+.++++++++.+|++. ..+.++++|+|  +++++|++.++++.. ||+|++
T Consensus       314 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~g~l~~~~~~i~~~~~l--~~~~~A~~~~~~~~~-gKvvi~  390 (398)
T 1kol_A          314 AKIGSLSIRFGLGWAKSHSFHTGQTPVMKYNRALMQAIMWDRINIAEVVGVQVISL--DDAPRGYGEFDAGVP-KKFVID  390 (398)
T ss_dssp             HHTTCCCCCHHHHHHTTCEEEESSCCHHHHHHHHHHHHHTTSCCHHHHHTEEEECG--GGHHHHHHHHHHTCS-CEEEEC
T ss_pred             cccccccccHHHHhhcccEEEecccChHHHHHHHHHHHHcCCCCCccceeEEEEcH--HHHHHHHHHHhCCCc-eEEEEE
Confidence                1233444567788998876543 45678999999999984 22567899999  999999999998877 999987


Q ss_pred             C
Q 017916          364 L  364 (364)
Q Consensus       364 ~  364 (364)
                      +
T Consensus       391 ~  391 (398)
T 1kol_A          391 P  391 (398)
T ss_dssp             T
T ss_pred             e
Confidence            4

>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=1.1e-52  Score=390.48  Aligned_cols=330  Identities=21%  Similarity=0.311  Sum_probs=277.8

Q ss_pred             cceeEEEecC-CceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCCCCCCC
Q 017916           17 VNMAAWLLGV-NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTL   95 (364)
Q Consensus        17 ~~~~~~~~~~-~~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~   95 (364)
                      +|++....++ +.+++.+.|.|+++++||+|||++++||++|+..+.|.+..   ..+|.++|||++|+|+++|++|++|
T Consensus        22 ~~~a~~~~~~~~~l~~~~~p~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~---~~~P~v~GhE~~G~V~~vG~~V~~~   98 (369)
T 1uuf_A           22 KIKAVGAYSAKQPLEPMDITRREPGPNDVKIEIAYCGVCHSDLHQVRSEWAG---TVYPCVPGHEIVGRVVAVGDQVEKY   98 (369)
T ss_dssp             -CEEEEBSSTTSCCEEEECCCCCCCTTEEEEEEEEEECCHHHHHHHHCTTSC---CCSSBCCCCCEEEEEEEECTTCCSC
T ss_pred             eEEEEEEcCCCCCcEEEEecCCCCCCCeEEEEEEEEeecHHHHHHhcCCCCC---CCCCeecccCceEEEEEECCCCCCC
Confidence            4677776654 78999999999999999999999999999999998875321   3579999999999999999999999


Q ss_pred             CCCCEEEEcCCc-CCCCCccccCCCCCCCCCcc--ccc-----cCCCCCcceeEEEecCCceEECCCC-CCccchhhhh-
Q 017916           96 VPGDRVALEPGI-SCWRCDHCKGGRYNLCPEMK--FFA-----TPPVHGSLANQVVHPADLCFKLPDN-VSLEEGAMCE-  165 (364)
Q Consensus        96 ~~Gd~V~~~~~~-~~~~~~~~~~~~~~~~~~~~--~~~-----~~~~~g~~~~~v~~~~~~~~~lP~~-~~~~~aa~~~-  165 (364)
                      ++||+|++.+.. .|..|.+|+.++.++|.+..  +.+     ....+|+|+||+++++++++++|++ +++++||.++ 
T Consensus        99 ~vGDrV~~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~~g~~~~G~~aeyv~v~~~~~~~~P~~~ls~~~aa~l~~  178 (369)
T 1uuf_A           99 APGDLVGVGCIVDSCKHCEECEDGLENYCDHMTGTYNSPTPDEPGHTLGGYSQQIVVHERYVLRIRHPQEQLAAVAPLLC  178 (369)
T ss_dssp             CTTCEEEECSEEECCSSSHHHHTTCGGGCTTCEETTTSBCSSTTSBCCCSSBSEEEEEGGGCEECCSCGGGHHHHGGGGT
T ss_pred             CCCCEEEEccCCCCCCCCcccCCCCcccCcchhcccccccccCCCCCCCcccceEEEcchhEEECCCCCCCHHHhhhhhh
Confidence            999999988764 59999999999999999863  211     1135699999999999999999999 9999988665 


Q ss_pred             hhHHHHHHHHHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHH
Q 017916          166 PLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVE  245 (364)
Q Consensus       166 ~~~~a~~~l~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~  245 (364)
                      .+.|||++++..++++|++|||+|+|++|++++|+|+.+|+ .|++++.++++.++++++|++.++++.+  +++   ++
T Consensus       179 ~~~tA~~al~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga-~Vi~~~~~~~~~~~a~~lGa~~vi~~~~--~~~---~~  252 (369)
T 1uuf_A          179 AGITTYSPLRHWQAGPGKKVGVVGIGGLGHMGIKLAHAMGA-HVVAFTTSEAKREAAKALGADEVVNSRN--ADE---MA  252 (369)
T ss_dssp             HHHHHHHHHHHTTCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHTCSEEEETTC--HHH---HH
T ss_pred             hHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCcEEecccc--HHH---HH
Confidence            88899999988899999999999999999999999999999 5888889999999999999999888643  232   22


Q ss_pred             HHHHHcCCCccEEEECCCCHHHHHHHHHhcccCCEEEEEcCCCCCc-cccchhhhhcCcEEEeeccC-CCcHHHHHHHHH
Q 017916          246 KIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEM-TVPLTPAAVREVDVVGVFRY-KNTWPLCLELLR  323 (364)
Q Consensus       246 ~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~  323 (364)
                      ++    ..++|++||++|.+..++.++++|+++|+++.+|...... .++...++.+++++.+.... .+.+++++++++
T Consensus       253 ~~----~~g~Dvvid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~  328 (369)
T 1uuf_A          253 AH----LKSFDFILNTVAAPHNLDDFTTLLKRDGTMTLVGAPATPHKSPEVFNLIMKRRAIAGSMIGGIPETQEMLDFCA  328 (369)
T ss_dssp             TT----TTCEEEEEECCSSCCCHHHHHTTEEEEEEEEECCCC-------CHHHHHTTTCEEEECCSCCHHHHHHHHHHHH
T ss_pred             Hh----hcCCCEEEECCCCHHHHHHHHHHhccCCEEEEeccCCCCccccCHHHHHhCCcEEEEeecCCHHHHHHHHHHHH
Confidence            22    2589999999997667889999999999999998654433 44555677899999998765 467899999999


Q ss_pred             cCCCCCCCceEEEeeCChhhHHHHHHHHhcCCCceEEEEeC
Q 017916          324 SGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  364 (364)
Q Consensus       324 ~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  364 (364)
                      +|++  ++.+ +.|+|  +++++|++.++++...||+|+++
T Consensus       329 ~g~i--~~~i-~~~~l--~~~~~A~~~~~~~~~~gKvvi~~  364 (369)
T 1uuf_A          329 EHGI--VADI-EMIRA--DQINEAYERMLRGDVKYRFVIDN  364 (369)
T ss_dssp             HHTC--CCCE-EEECG--GGHHHHHHHHHTTCSSSEEEEEG
T ss_pred             hCCC--Ccce-EEEcH--HHHHHHHHHHHcCCCceEEEEec
Confidence            9998  4555 56888  99999999999988889999864

>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*

Probab=100.00  E-value=2.4e-52  Score=386.97  Aligned_cols=331  Identities=22%  Similarity=0.331  Sum_probs=279.7

Q ss_pred             hhcceeEEEecC-CceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCCCCC
Q 017916           15 EEVNMAAWLLGV-NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVK   93 (364)
Q Consensus        15 ~~~~~~~~~~~~-~~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~   93 (364)
                      ++.++++...++ +.+++.+.|.|+++++||+|||+++++|++|++.+.|.+..   ..+|.++|||++|+|+++|++|+
T Consensus         7 ~m~~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~---~~~P~v~GhE~~G~V~~vG~~v~   83 (357)
T 2cf5_A            7 ERKTTGWAARDPSGILSPYTYTLRETGPEDVNIRIICCGICHTDLHQTKNDLGM---SNYPMVPGHEVVGEVVEVGSDVS   83 (357)
T ss_dssp             CCEEEEEEECSTTCCEEEEEEECCCCCTTEEEEEEEEEEECHHHHHHHTCTTTC---CCSSBCCCCEEEEEEEEECSSCC
T ss_pred             cceeEEEEEccCCCCcEEEEecCCCCCCCEEEEEEEEEeecchhhhhhcCCCCC---CCCCeecCcceeEEEEEECCCCC
Confidence            345667776654 78999999999999999999999999999999998875421   45799999999999999999999


Q ss_pred             CCCCCCEEEEcCC-cCCCCCccccCCCCCCCCCccccc------cCCCCCcceeEEEecCCceEECCCCCCccchhhhh-
Q 017916           94 TLVPGDRVALEPG-ISCWRCDHCKGGRYNLCPEMKFFA------TPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-  165 (364)
Q Consensus        94 ~~~~Gd~V~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~g~~~~~v~~~~~~~~~lP~~~~~~~aa~~~-  165 (364)
                      +|++||+|++.+. .+|..|.+|+.++.++|.+..+..      ....+|+|+||+++++++++++|+++++++||.++ 
T Consensus        84 ~~~vGdrV~~~~~~~~Cg~C~~c~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~~P~~ls~~~aa~l~~  163 (357)
T 2cf5_A           84 KFTVGDIVGVGCLVGCCGGCSPCERDLEQYCPKKIWSYNDVYINGQPTQGGFAKATVVHQKFVVKIPEGMAVEQAAPLLC  163 (357)
T ss_dssp             SCCTTCEEEECSEEECCSSSHHHHTTCGGGCTTCEETTTSBCTTSCBCCCSSBSCEEEEGGGEEECCSSCCHHHHTGGGT
T ss_pred             CCCCCCEEEEcCCCCCCCCChHHhCcCcccCCCccccccccccCCCCCCCccccEEEechhhEEECcCCCCHHHhhhhhh
Confidence            9999999987554 579999999999999997654321      11257999999999999999999999999988765 


Q ss_pred             hhHHHHHHHHHcCCC-CCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHH-HcCCCeEEecCCCcccHHHH
Q 017916          166 PLSVGLHACRRANIG-PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAK-ELGADNIVKVSTNLQDIAEE  243 (364)
Q Consensus       166 ~~~~a~~~l~~~~~~-~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~-~lg~~~~~~~~~~~~~~~~~  243 (364)
                      .+.|||+++++.+++ +|++|||+|+|++|++++|+|+.+|+ .|++++.++++.++++ ++|+++++++.+     .+.
T Consensus       164 ~~~ta~~~l~~~~~~~~g~~VlV~GaG~vG~~a~qlak~~Ga-~Vi~~~~~~~~~~~~~~~lGa~~vi~~~~-----~~~  237 (357)
T 2cf5_A          164 AGVTVYSPLSHFGLKQPGLRGGILGLGGVGHMGVKIAKAMGH-HVTVISSSNKKREEALQDLGADDYVIGSD-----QAK  237 (357)
T ss_dssp             HHHHHHHHHHHTSTTSTTCEEEEECCSHHHHHHHHHHHHHTC-EEEEEESSTTHHHHHHTTSCCSCEEETTC-----HHH
T ss_pred             hHHHHHHHHHhcCCCCCCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHHcCCceeecccc-----HHH
Confidence            788999999888888 99999999999999999999999999 6888888999988887 899999888643     123


Q ss_pred             HHHHHHHcCCCccEEEECCCCHHHHHHHHHhcccCCEEEEEcCCCCCcc-ccchhhhhcCcEEEeeccC-CCcHHHHHHH
Q 017916          244 VEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMT-VPLTPAAVREVDVVGVFRY-KNTWPLCLEL  321 (364)
Q Consensus       244 i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~  321 (364)
                      ++++    ..++|++||++|.+..++.++++|+++|+++.+|....... ++.. ++.+++++.+.+.. .+.+++++++
T Consensus       238 ~~~~----~~g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~-~~~~~~~i~g~~~~~~~~~~~~~~l  312 (357)
T 2cf5_A          238 MSEL----ADSLDYVIDTVPVHHALEPYLSLLKLDGKLILMGVINNPLQFLTPL-LMLGRKVITGSFIGSMKETEEMLEF  312 (357)
T ss_dssp             HHHS----TTTEEEEEECCCSCCCSHHHHTTEEEEEEEEECSCCSSCCCCCHHH-HHHHTCEEEECCSCCHHHHHHHHHH
T ss_pred             HHHh----cCCCCEEEECCCChHHHHHHHHHhccCCEEEEeCCCCCCccccCHH-HHhCccEEEEEccCCHHHHHHHHHH
Confidence            3332    24799999999976678899999999999999986543333 4444 77899999998765 4678999999


Q ss_pred             HHcCCCCCCCceEEEeeCChhhHHHHHHHHhcCCCceEEEEeC
Q 017916          322 LRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  364 (364)
Q Consensus       322 l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  364 (364)
                      +++|++  ++.+ ++|+|  +++++|++.++++...||+|+++
T Consensus       313 ~~~g~l--~~~~-~~~~l--~~~~~A~~~~~~~~~~gKvvi~~  350 (357)
T 2cf5_A          313 CKEKGL--SSII-EVVKM--DYVNTAFERLEKNDVRYRFVVDV  350 (357)
T ss_dssp             HHHTTC--CCCE-EEEEG--GGHHHHHHHHHTTCSSSEEEEET
T ss_pred             HHcCCC--CCce-EEEeH--HHHHHHHHHHHCCCCceEEEEeC
Confidence            999998  4445 78999  99999999999998899999974

>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A

Probab=100.00  E-value=1e-51  Score=394.52  Aligned_cols=346  Identities=21%  Similarity=0.212  Sum_probs=292.5

Q ss_pred             ccccchhcceeEEEecC----------------CceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhccc-------
Q 017916           10 EKEDGEEVNMAAWLLGV----------------NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRC-------   66 (364)
Q Consensus        10 ~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~-------   66 (364)
                      .+++++.+|+++++.++                +.+++.+.|.|+++++||+|||.+++||++|++...+...       
T Consensus        23 ~~~~iP~tmkA~v~~~~~~~~~~~~~~~~~~~~~~l~~~e~p~P~~~~~eVlVkV~a~gic~sD~~~~~~~~~~~~~~~~  102 (456)
T 3krt_A           23 AALPLPESYRAITVHKDETEMFAGLETRDKDPRKSIHLDDVPVPELGPGEALVAVMASSVNYNSVHTSIFEPLSTFGFLE  102 (456)
T ss_dssp             HHSCCCSCEEEEEEEGGGTTTTTTCCGGGCCHHHHCEEEEECCCCCCTTEEEEEEEEEEECHHHHHHHTTCSSCSHHHHH
T ss_pred             ccCCCCcceEEEEEeccccccccccccccCCCCCCcEEEEccCCCCCCCeEEEEEEEEEecchhhhhhhcCcccchhhhh
Confidence            45677889999999975                6899999999999999999999999999999876432100       


Q ss_pred             -----CC--ccCCCC-cccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcc
Q 017916           67 -----AD--FVVKEP-MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSL  138 (364)
Q Consensus        67 -----~~--~~~~~p-~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~  138 (364)
                           +.  ....+| .++|||++|+|+++|++|++|++||+|++.+. .|..|..|..+..++|.+..+.+....+|+|
T Consensus       103 ~~g~~~~~~~~~~~P~~v~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~~-~c~~~~~~~~~~~~~c~~~~~~G~~~~~G~~  181 (456)
T 3krt_A          103 RYGRVSDLAKRHDLPYHVIGSDLAGVVLRTGPGVNAWQAGDEVVAHCL-SVELESSDGHNDTMLDPEQRIWGFETNFGGL  181 (456)
T ss_dssp             HHHTSCHHHHTTCCSEEECCSCCEEEEEEECTTCCSCCTTCEEEECCE-ECCCCSGGGTTSGGGCTTCEETTTTSSSCSS
T ss_pred             hccccccccccCCCCcccccceeEEEEEEECCCCCCCCCCCEEEEeCC-cccccccccccccccCccccccccCCCCCcc
Confidence                 00  013567 69999999999999999999999999998654 6888999999999999999988876667999


Q ss_pred             eeEEEecCCceEECCCCCCccchhhhh-hhHHHHHHHHH---cCCCCCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEe
Q 017916          139 ANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHACRR---ANIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVD  213 (364)
Q Consensus       139 ~~~v~~~~~~~~~lP~~~~~~~aa~~~-~~~~a~~~l~~---~~~~~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~  213 (364)
                      +||+++++++++++|+++++++||+++ .+.|||+++..   +++++|++|||+|+ |++|++++|+|+.+|+ .+++++
T Consensus       182 aey~~v~~~~~~~~P~~l~~~~aa~l~~~~~ta~~al~~~~~~~~~~g~~VlV~GasG~vG~~avqlak~~Ga-~vi~~~  260 (456)
T 3krt_A          182 AEIALVKSNQLMPKPDHLSWEEAAAPGLVNSTAYRQLVSRNGAGMKQGDNVLIWGASGGLGSYATQFALAGGA-NPICVV  260 (456)
T ss_dssp             BSEEEEEGGGEEECCTTSCHHHHHSSHHHHHHHHHHHTSTTTTCCCTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEE
T ss_pred             cceEEechHHeeECCCCCCHHHHHHhhhHHHHHHHHHHhhcccCCCCCCEEEEECCCCHHHHHHHHHHHHcCC-eEEEEE
Confidence            999999999999999999999999776 78999999842   78999999999998 9999999999999999 566677


Q ss_pred             cChhHHHHHHHcCCCeEEecCCCcc---------------cHHHHHHHHHHHcCCCccEEEECCCCHHHHHHHHHhcccC
Q 017916          214 VDDYRLSVAKELGADNIVKVSTNLQ---------------DIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAG  278 (364)
Q Consensus       214 ~~~~~~~~~~~lg~~~~~~~~~~~~---------------~~~~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~  278 (364)
                      .+++|.++++++|++.++++...+.               ++.+.+++++  .+.++|++|||+|+ +.+..++++|+++
T Consensus       261 ~~~~~~~~~~~lGa~~vi~~~~~d~~~~~~~~~~~~~~~~~~~~~i~~~t--~g~g~Dvvid~~G~-~~~~~~~~~l~~~  337 (456)
T 3krt_A          261 SSPQKAEICRAMGAEAIIDRNAEGYRFWKDENTQDPKEWKRFGKRIRELT--GGEDIDIVFEHPGR-ETFGASVFVTRKG  337 (456)
T ss_dssp             SSHHHHHHHHHHTCCEEEETTTTTCCSEEETTEECHHHHHHHHHHHHHHH--TSCCEEEEEECSCH-HHHHHHHHHEEEE
T ss_pred             CCHHHHHHHHhhCCcEEEecCcCcccccccccccchHHHHHHHHHHHHHh--CCCCCcEEEEcCCc-hhHHHHHHHhhCC
Confidence            8999999999999999998754321               1235555543  35699999999995 8899999999999


Q ss_pred             CEEEEEcCCCC-CccccchhhhhcCcEEEeeccC-CCcHHHHHHHHHcCCCCCCCceEEEeeCChhhHHHHHHHHhcCCC
Q 017916          279 GKVCLVGMGHH-EMTVPLTPAAVREVDVVGVFRY-KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGT  356 (364)
Q Consensus       279 G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~  356 (364)
                      |+++.+|.... ...++...+..+.+++.+.... .+.+.++++++++|++  ++.++++|+|  +++++|++.++++..
T Consensus       338 G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g~l--~~~i~~~~~l--~~~~eA~~~l~~~~~  413 (456)
T 3krt_A          338 GTITTCASTSGYMHEYDNRYLWMSLKRIIGSHFANYREAWEANRLIAKGRI--HPTLSKVYSL--EDTGQAAYDVHRNLH  413 (456)
T ss_dssp             EEEEESCCTTCSEEEEEHHHHHHTTCEEEECCSCCHHHHHHHHHHHHTTSS--CCCEEEEEEG--GGHHHHHHHHHTTCS
T ss_pred             cEEEEEecCCCcccccCHHHHHhcCeEEEEeccCCHHHHHHHHHHHHcCCc--ccceeEEEcH--HHHHHHHHHHHhCCC
Confidence            99999986543 3355666778889999998765 4567789999999998  6788899999  999999999999999


Q ss_pred             ceEEEEeC
Q 017916          357 AIKVMFNL  364 (364)
Q Consensus       357 ~gkvvv~~  364 (364)
                      .||+|+.+
T Consensus       414 ~GKvvv~~  421 (456)
T 3krt_A          414 QGKVGVLC  421 (456)
T ss_dssp             SSEEEEES
T ss_pred             CCcEEEEe
Confidence            99999864

>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*

Probab=100.00  E-value=1.2e-51  Score=383.28  Aligned_cols=329  Identities=22%  Similarity=0.310  Sum_probs=276.8

Q ss_pred             ceeEEEe-cCCceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCCCCCCCC
Q 017916           18 NMAAWLL-GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLV   96 (364)
Q Consensus        18 ~~~~~~~-~~~~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~   96 (364)
                      +++.... +++.+++.+.|.|+++++||+|||.+++||++|++.+.|.+..   ..+|.++|||++|+|+++|++|++|+
T Consensus        17 ~~~~~~~~~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~---~~~P~v~GhE~~G~V~~vG~~V~~~~   93 (366)
T 1yqd_A           17 AFGWAARDQSGHLSPFNFSRRATGEEDVRFKVLYCGVCHSDLHSIKNDWGF---SMYPLVPGHEIVGEVTEVGSKVKKVN   93 (366)
T ss_dssp             EEEEEECSTTCCEEEEEEEECCCCTTEEEEEEEEEEECHHHHHHHHTSSSC---CCSSBCCCCCEEEEEEEECTTCCSCC
T ss_pred             EEEEEEcCCCCCcEEEEccCCCCCCCeEEEEEEEEeechhhHHHHcCCCCC---CCCCEecccceEEEEEEECCCCCcCC
Confidence            3344444 4578999999999999999999999999999999998875421   45799999999999999999999999


Q ss_pred             CCCEEEEcCC-cCCCCCccccCCCCCCCCCccccc------cCCCCCcceeEEEecCCceEECCCCCCccchhhhh-hhH
Q 017916           97 PGDRVALEPG-ISCWRCDHCKGGRYNLCPEMKFFA------TPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLS  168 (364)
Q Consensus        97 ~Gd~V~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~g~~~~~v~~~~~~~~~lP~~~~~~~aa~~~-~~~  168 (364)
                      +||+|++.+. .+|..|.+|+.++.++|.+..+..      ....+|+|+||+++++++++++|+++++++||.++ .+.
T Consensus        94 vGDrV~~~~~~~~Cg~C~~c~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~~P~~ls~~~aa~l~~~~~  173 (366)
T 1yqd_A           94 VGDKVGVGCLVGACHSCESCANDLENYCPKMILTYASIYHDGTITYGGYSNHMVANERYIIRFPDNMPLDGGAPLLCAGI  173 (366)
T ss_dssp             TTCEEEECSEEECCSSSHHHHTTCGGGCTTCEESSSSBCTTSCBCCCSSBSEEEEEGGGCEECCTTSCTTTTGGGGTHHH
T ss_pred             CCCEEEEcCCcCCCCCChhhhCcCcccCCcccccccccccCCCcCCCccccEEEEchhhEEECCCCCCHHHhhhhhhhHH
Confidence            9999987654 579999999999999997654321      11257999999999999999999999999988765 788


Q ss_pred             HHHHHHHHcCCC-CCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHH-HcCCCeEEecCCCcccHHHHHHH
Q 017916          169 VGLHACRRANIG-PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAK-ELGADNIVKVSTNLQDIAEEVEK  246 (364)
Q Consensus       169 ~a~~~l~~~~~~-~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~-~lg~~~~~~~~~~~~~~~~~i~~  246 (364)
                      |||++++..+++ +|++|||+|+|++|++++|+|+.+|+ .|++++.++++.+.++ ++|++.++++.+  .   +.+++
T Consensus       174 ta~~al~~~~~~~~g~~VlV~GaG~vG~~~~q~a~~~Ga-~Vi~~~~~~~~~~~~~~~lGa~~v~~~~~--~---~~~~~  247 (366)
T 1yqd_A          174 TVYSPLKYFGLDEPGKHIGIVGLGGLGHVAVKFAKAFGS-KVTVISTSPSKKEEALKNFGADSFLVSRD--Q---EQMQA  247 (366)
T ss_dssp             HHHHHHHHTTCCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCGGGHHHHHHTSCCSEEEETTC--H---HHHHH
T ss_pred             HHHHHHHhcCcCCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhcCCceEEeccC--H---HHHHH
Confidence            999999888888 99999999999999999999999999 6888888888888876 899999888643  1   23333


Q ss_pred             HHHHcCCCccEEEECCCCHHHHHHHHHhcccCCEEEEEcCCCCCccccchhhhhcCcEEEeeccC-CCcHHHHHHHHHcC
Q 017916          247 IQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY-KNTWPLCLELLRSG  325 (364)
Q Consensus       247 ~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~g  325 (364)
                      +    .+++|++||++|....++.++++|+++|+++.+|.......++...++.+++++.+.+.. .+.++++++++++|
T Consensus       248 ~----~~~~D~vid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g  323 (366)
T 1yqd_A          248 A----AGTLDGIIDTVSAVHPLLPLFGLLKSHGKLILVGAPEKPLELPAFSLIAGRKIVAGSGIGGMKETQEMIDFAAKH  323 (366)
T ss_dssp             T----TTCEEEEEECCSSCCCSHHHHHHEEEEEEEEECCCCSSCEEECHHHHHTTTCEEEECCSCCHHHHHHHHHHHHHT
T ss_pred             h----hCCCCEEEECCCcHHHHHHHHHHHhcCCEEEEEccCCCCCCcCHHHHHhCCcEEEEecCCCHHHHHHHHHHHHcC
Confidence            3    247999999999766778999999999999999865544445556678899999998765 46789999999999


Q ss_pred             CCCCCCceEEEeeCChhhHHHHHHHHhcCCCceEEEEeC
Q 017916          326 KIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  364 (364)
Q Consensus       326 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  364 (364)
                      ++  ++.+ ++|+|  +++++|++.++++...||+|+++
T Consensus       324 ~l--~~~~-~~~~l--~~~~~A~~~~~~~~~~gKvvl~~  357 (366)
T 1yqd_A          324 NI--TADI-EVIST--DYLNTAMERLAKNDVRYRFVIDV  357 (366)
T ss_dssp             TC--CCCE-EEECG--GGHHHHHHHHHTTCCSSEEEECH
T ss_pred             CC--CCce-EEEcH--HHHHHHHHHHHcCCcceEEEEEc
Confidence            98  4445 78999  99999999999998899999863

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}

Probab=100.00  E-value=1.9e-50  Score=373.69  Aligned_cols=314  Identities=22%  Similarity=0.301  Sum_probs=274.6

Q ss_pred             ccccchhcceeEEEec---CCceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEE
Q 017916           10 EKEDGEEVNMAAWLLG---VNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIE   86 (364)
Q Consensus        10 ~~~~~~~~~~~~~~~~---~~~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~   86 (364)
                      .+|+++++|+++++..   ++.+++.+.|.|+++++||+|||.+++||++|+..+.|.+..  ...+|.++|+|++|+|+
T Consensus        21 ~~~~~p~~MkA~~~~~~g~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~--~~~~p~i~G~E~~G~V~   98 (353)
T 4dup_A           21 QSMSLPQEMRFVDLKSFGGPDVMVIGKRPLPVAGEGEVLVRAEAIGVNRPDIAQRQGSYPP--PKDASPILGLELSGEIV   98 (353)
T ss_dssp             --CCCCSSEEEEEESSSSSGGGEEEEEECCCCCCTTEEEEEEEEEEECHHHHHHHTTSSCC--CTTSCSSSCCEEEEEEE
T ss_pred             ecCCCChheeEEEEccCCCccceEEEeccCCCCCCCEEEEEEEEEecCHHHHHHhCCCCCC--CCCCCCccccccEEEEE
Confidence            3567888899999885   577999999999999999999999999999999999886532  24579999999999999


Q ss_pred             EeCCCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCccchhhhh-
Q 017916           87 KVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-  165 (364)
Q Consensus        87 ~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~lP~~~~~~~aa~~~-  165 (364)
                      ++|+++++|++||+|+++                            ..+|+|+||+++++++++++|+++++++||+++ 
T Consensus        99 ~vG~~v~~~~vGdrV~~~----------------------------~~~G~~aey~~v~~~~~~~~P~~~~~~~aa~l~~  150 (353)
T 4dup_A           99 GVGPGVSGYAVGDKVCGL----------------------------ANGGAYAEYCLLPAGQILPFPKGYDAVKAAALPE  150 (353)
T ss_dssp             EECTTCCSCCTTCEEEEE----------------------------CSSCCSBSEEEEEGGGEEECCTTCCHHHHHTSHH
T ss_pred             EECCCCCCCCCCCEEEEe----------------------------cCCCceeeEEEEcHHHcEeCCCCCCHHHHhhhhh
Confidence            999999999999999875                            246999999999999999999999999998664 


Q ss_pred             hhHHHHHHH-HHcCCCCCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHH
Q 017916          166 PLSVGLHAC-RRANIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEE  243 (364)
Q Consensus       166 ~~~~a~~~l-~~~~~~~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~  243 (364)
                      +++|||+++ +.+++++|++|||+|+ |++|++++|+|+..|+ .|++++.++++.++++++|++.++++..  +++.+.
T Consensus       151 ~~~ta~~~l~~~~~~~~g~~VlV~Gg~g~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~lGa~~~~~~~~--~~~~~~  227 (353)
T 4dup_A          151 TFFTVWANLFQMAGLTEGESVLIHGGTSGIGTTAIQLARAFGA-EVYATAGSTGKCEACERLGAKRGINYRS--EDFAAV  227 (353)
T ss_dssp             HHHHHHHHHTTTTCCCTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHTCSEEEETTT--SCHHHH
T ss_pred             HHHHHHHHHHHhcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhcCCCEEEeCCc--hHHHHH
Confidence            899999999 6799999999999976 9999999999999999 6888889999999999999999888654  677777


Q ss_pred             HHHHHHHcCCCccEEEECCCCHHHHHHHHHhcccCCEEEEEcCCCCC-cc-ccchhhhhcCcEEEeeccCC-Cc------
Q 017916          244 VEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHE-MT-VPLTPAAVREVDVVGVFRYK-NT------  314 (364)
Q Consensus       244 i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~-~~~~~~~~~~~~~~~~~~~~-~~------  314 (364)
                      +++..   +.++|++|||+|+ +.+..++++|+++|+++.+|..... .. ++...+..+++++.+..... ..      
T Consensus       228 ~~~~~---~~g~Dvvid~~g~-~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~  303 (353)
T 4dup_A          228 IKAET---GQGVDIILDMIGA-AYFERNIASLAKDGCLSIIAFLGGAVAEKVNLSPIMVKRLTVTGSTMRPRTAEEKRAI  303 (353)
T ss_dssp             HHHHH---SSCEEEEEESCCG-GGHHHHHHTEEEEEEEEECCCTTCSEEEEEECHHHHHTTCEEEECCSTTSCHHHHHHH
T ss_pred             HHHHh---CCCceEEEECCCH-HHHHHHHHHhccCCEEEEEEecCCCcccCCCHHHHHhcCceEEEEeccccchhhhHHH
Confidence            77664   6789999999995 6788999999999999999865433 23 66677888999999987652 11      


Q ss_pred             ----HHHHHHHHHcCCCCCCCceEEEeeCChhhHHHHHHHHhcCCCceEEEEeC
Q 017916          315 ----WPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  364 (364)
Q Consensus       315 ----~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  364 (364)
                          ++++++++++|++  ++.+.++|+|  +++++|++.++++...||+|+++
T Consensus       304 ~~~~~~~~~~l~~~g~l--~~~i~~~~~l--~~~~~A~~~l~~~~~~gKvvl~~  353 (353)
T 4dup_A          304 RDDLLSEVWPLLEAGTV--APVIHKVFAF--EDVADAHRLLEEGSHVGKVMLTV  353 (353)
T ss_dssp             HHHHHHHTHHHHHHTSS--CCCEEEEEEG--GGHHHHHHHHHHTCCSSEEEEEC
T ss_pred             HHHHHHHHHHHHHCCCc--cCCcceEEeH--HHHHHHHHHHHhCCCCceEEEeC
Confidence                7789999999998  7888999999  99999999999999999999985

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A

Probab=100.00  E-value=7.1e-51  Score=388.29  Aligned_cols=345  Identities=22%  Similarity=0.265  Sum_probs=287.8

Q ss_pred             ccccchhcceeEEEecCC--------------ceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhh------------
Q 017916           10 EKEDGEEVNMAAWLLGVN--------------TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKT------------   63 (364)
Q Consensus        10 ~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g------------   63 (364)
                      ++.+++.+|+++++..+.              .+++.+.|.|+++++||+|||+++|||++|++....            
T Consensus        17 ~~~~~p~tmkA~v~~~~~~~~~~~~~~~~~~~~l~~~e~p~P~~~~~eVlVrV~a~gic~sD~~~~~~~~~~~~~~~~~~   96 (447)
T 4a0s_A           17 EAAPVPDTYLALHLRAEDADMFKGVADKDVRKSLRLGEVPMPELAPDEVLVAVMASSINYNTVWSAMFEPIPTFHFLKQN   96 (447)
T ss_dssp             HHSCCCSEEEEEEEEGGGTTTTTTCSSCCHHHHCEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHTTCSSCHHHHHHHH
T ss_pred             hccCCChhheeeeeeccccccccccccCCCCCCceEEeccCCCCCCCeEEEEEEEEEECcHHhhhhccCcccchhhhhhh
Confidence            456778889999999776              899999999999999999999999999999754221            


Q ss_pred             cccCCc--cCCCC-cccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCccee
Q 017916           64 LRCADF--VVKEP-MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLAN  140 (364)
Q Consensus        64 ~~~~~~--~~~~p-~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~  140 (364)
                      ...+.+  ...+| .++|||++|+|+++|++|++|++||+|++.+...|..|+. ..+..++|.+..+.+....+|+|+|
T Consensus        97 ~~~g~~~~~~~~P~~v~GhE~~G~V~~vG~~V~~~~vGDrV~~~~~~~~~~~~~-~~~~~~~c~~~~~~G~~~~~G~~ae  175 (447)
T 4a0s_A           97 ARQGGWATRHDQPYHVLGSDCSGVVVRTGIGVRRWKPGDHVIVHPAHVDEQEPA-THGDGMLGTEQRAWGFETNFGGLAE  175 (447)
T ss_dssp             HTTCGGGGGGCCSEEECCSCEEEEEEEECTTCCSCCTTCEEEECSEECCTTSGG-GGTCTTCSTTCEETTTTSSSCSSBS
T ss_pred             cccCccccccCCCCcccccceeEEEEEECCCCCCCCCCCEEEEecCcCcCcccc-cccccccccccccccccCCCCceee
Confidence            001111  13467 6999999999999999999999999999998877777764 4567899999988887666799999


Q ss_pred             EEEecCCceEECCCCCCccchhhhh-hhHHHHHHHH---HcCCCCCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecC
Q 017916          141 QVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHACR---RANIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVD  215 (364)
Q Consensus       141 ~v~~~~~~~~~lP~~~~~~~aa~~~-~~~~a~~~l~---~~~~~~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~  215 (364)
                      |+++++++++++|+++++++||+++ .+.|||+++.   .+++++|++|||+|+ |++|++++|+|+.+|+ .+++++.+
T Consensus       176 y~~v~~~~~~~iP~~ls~~~aA~l~~~~~tA~~al~~~~~~~~~~g~~VlV~GasG~iG~~a~qla~~~Ga-~vi~~~~~  254 (447)
T 4a0s_A          176 YGVVRASQLLPKPAHLTWEEAAVSPLCAGTAYRMLVSDRGAQMKQGDIVLIWGASGGLGSYAIQFVKNGGG-IPVAVVSS  254 (447)
T ss_dssp             EEEEEGGGEEECCTTSCHHHHHTSHHHHHHHHHHHTSTTTTCCCTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESS
T ss_pred             eeecCHHHcEECCCCCCHHHHHHhHHHHHHHHHHHHhhhccCCCCCCEEEEECCCCHHHHHHHHHHHHcCC-EEEEEeCC
Confidence            9999999999999999999999775 7889999983   488999999999998 9999999999999999 56777789


Q ss_pred             hhHHHHHHHcCCCeEEecCCCc----------------ccHHHHHHHHHHHcCCCccEEEECCCCHHHHHHHHHhcccCC
Q 017916          216 DYRLSVAKELGADNIVKVSTNL----------------QDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGG  279 (364)
Q Consensus       216 ~~~~~~~~~lg~~~~~~~~~~~----------------~~~~~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G  279 (364)
                      +++.++++++|++.++++....                ..+.+.+++.   .+.++|++||++| ...++.++++++++|
T Consensus       255 ~~~~~~~~~lGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~---~g~g~Dvvid~~G-~~~~~~~~~~l~~~G  330 (447)
T 4a0s_A          255 AQKEAAVRALGCDLVINRAELGITDDIADDPRRVVETGRKLAKLVVEK---AGREPDIVFEHTG-RVTFGLSVIVARRGG  330 (447)
T ss_dssp             HHHHHHHHHTTCCCEEEHHHHTCCTTGGGCHHHHHHHHHHHHHHHHHH---HSSCCSEEEECSC-HHHHHHHHHHSCTTC
T ss_pred             HHHHHHHHhcCCCEEEecccccccccccccccccchhhhHHHHHHHHH---hCCCceEEEECCC-chHHHHHHHHHhcCC
Confidence            9999999999999888753211                0113444443   3678999999999 478899999999999


Q ss_pred             EEEEEcCCCC-CccccchhhhhcCcEEEeeccC-CCcHHHHHHHHHcCCCCCCCceEEEeeCChhhHHHHHHHHhcCCCc
Q 017916          280 KVCLVGMGHH-EMTVPLTPAAVREVDVVGVFRY-KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTA  357 (364)
Q Consensus       280 ~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~  357 (364)
                      +++.+|.... ...++...++.+.+++.+.... ...+.++++++++|++  ++.++++|+|  +++++||+.++++...
T Consensus       331 ~iv~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g~l--~~~i~~~~~l--~~~~~A~~~~~~~~~~  406 (447)
T 4a0s_A          331 TVVTCGSSSGYLHTFDNRYLWMKLKKIVGSHGANHEEQQATNRLFESGAV--VPAMSAVYPL--AEAAEACRVVQTSRQV  406 (447)
T ss_dssp             EEEESCCTTCSEEEEEHHHHHHTTCEEEECCSCCHHHHHHHHHHHHTTSS--CCCEEEEEEG--GGHHHHHHHHHTTCCS
T ss_pred             EEEEEecCCCcccccCHHHHHhCCCEEEecCCCCHHHHHHHHHHHHcCCc--ccceeEEEcH--HHHHHHHHHHhcCCCc
Confidence            9999986543 3345566678899999998766 4567899999999998  6788999999  9999999999999999


Q ss_pred             eEEEEeC
Q 017916          358 IKVMFNL  364 (364)
Q Consensus       358 gkvvv~~  364 (364)
                      ||+|+.+
T Consensus       407 GKvvv~~  413 (447)
T 4a0s_A          407 GKVAVLC  413 (447)
T ss_dssp             SEEEEES
T ss_pred             eEEEEEe
Confidence            9998864

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}

Probab=100.00  E-value=4e-50  Score=369.90  Aligned_cols=315  Identities=24%  Similarity=0.319  Sum_probs=263.6

Q ss_pred             CccccccchhcceeEEEec---CCceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeE
Q 017916            7 SQGEKEDGEEVNMAAWLLG---VNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAG   83 (364)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G   83 (364)
                      ++..+..++.+|+++++..   ++.+++.+.|.|++++|||+|||++++||++|+..+.|.+..  ...+|.++|||++|
T Consensus        11 ~~~~~~~~p~~MkA~~~~~~g~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~--~~~~p~v~G~E~~G   88 (342)
T 4eye_A           11 TLEAQTQGPGSMKAIQAQSLSGPEGLVYTDVETPGAGPNVVVVDVKAAGVCFPDYLMTKGEYQL--KMEPPFVPGIETAG   88 (342)
T ss_dssp             -------CCCEEEEEEECSSSGGGGEEEEEEECCCCCTTCEEEEEEEEECCHHHHHHHTTCSSS--CCCSSBCCCSEEEE
T ss_pred             CCcccccCCcceEEEEEecCCCCceeEEEeCCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCC--CCCCCCccceeEEE
Confidence            3344556677899999874   567999999999999999999999999999999999886532  24679999999999


Q ss_pred             EEEEeCCCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCccchhh
Q 017916           84 VIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAM  163 (364)
Q Consensus        84 ~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~lP~~~~~~~aa~  163 (364)
                      +|+++|++++ |++||+|+++                            ..+|+|+||+.+++++++++|+++++++|+.
T Consensus        89 ~V~~vG~~v~-~~vGDrV~~~----------------------------~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~  139 (342)
T 4eye_A           89 VVRSAPEGSG-IKPGDRVMAF----------------------------NFIGGYAERVAVAPSNILPTPPQLDDAEAVA  139 (342)
T ss_dssp             EEEECCTTSS-CCTTCEEEEE----------------------------CSSCCSBSEEEECGGGEEECCTTSCHHHHHH
T ss_pred             EEEEECCCCC-CCCCCEEEEe----------------------------cCCCcceEEEEEcHHHeEECCCCCCHHHHHH
Confidence            9999999999 9999999975                            2469999999999999999999999999875


Q ss_pred             h-hhhHHHHHHH-HHcCCCCCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccH
Q 017916          164 C-EPLSVGLHAC-RRANIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDI  240 (364)
Q Consensus       164 ~-~~~~~a~~~l-~~~~~~~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~  240 (364)
                      + .+++|||+++ +.+++++|++|||+|+ |++|++++|+|+.+|+ .|+++++++++.++++++|++.++++.   +++
T Consensus       140 l~~~~~ta~~~l~~~~~~~~g~~VlV~Gasg~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~~ga~~v~~~~---~~~  215 (342)
T 4eye_A          140 LIANYHTMYFAYARRGQLRAGETVLVLGAAGGIGTAAIQIAKGMGA-KVIAVVNRTAATEFVKSVGADIVLPLE---EGW  215 (342)
T ss_dssp             HTTHHHHHHHHHHTTSCCCTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHTCSEEEESS---TTH
T ss_pred             hhhHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhcCCcEEecCc---hhH
Confidence            5 5999999999 6799999999999998 9999999999999999 788888999999999999999988864   577


Q ss_pred             HHHHHHHHHHcCCCccEEEECCCCHHHHHHHHHhcccCCEEEEEcCCCCC-ccccchhhhhcCcEEEeeccC--------
Q 017916          241 AEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHE-MTVPLTPAAVREVDVVGVFRY--------  311 (364)
Q Consensus       241 ~~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~--------  311 (364)
                      .+.++++.  .+.++|++|||+|+ +.+..++++|+++|+++.+|..... ..++...+..+++++.+....        
T Consensus       216 ~~~v~~~~--~~~g~Dvvid~~g~-~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~  292 (342)
T 4eye_A          216 AKAVREAT--GGAGVDMVVDPIGG-PAFDDAVRTLASEGRLLVVGFAAGGIPTIKVNRLLLRNASLIGVAWGEFLRTHAD  292 (342)
T ss_dssp             HHHHHHHT--TTSCEEEEEESCC---CHHHHHHTEEEEEEEEEC----------CCCCGGGTTCEEEECCHHHHHHHCTT
T ss_pred             HHHHHHHh--CCCCceEEEECCch-hHHHHHHHhhcCCCEEEEEEccCCCCCccCHHHHhhcCCEEEEEehhhhhhcCHH
Confidence            77776654  24589999999995 6789999999999999999854432 345556678899999998642        


Q ss_pred             --CCcHHHHHHHHHcCCCCCCCceEEEeeCChhhHHHHHHHHhcCCCceEEEEeC
Q 017916          312 --KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  364 (364)
Q Consensus       312 --~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  364 (364)
                        .+.++++++++++| +  ++.+.++|+|  +++++|++.++++...||+|++.
T Consensus       293 ~~~~~~~~~~~l~~~g-l--~~~i~~~~~l--~~~~~A~~~~~~~~~~gKvvl~P  342 (342)
T 4eye_A          293 YLYETQAGLEKLVAEG-M--RPPVSARIPL--SEGRQALQDFADGKVYGKMVLVP  342 (342)
T ss_dssp             HHHHHHHHHHHHHHTT-C--CCCEEEEEEG--GGHHHHHHHHHTTCCCSEEEEEC
T ss_pred             HHHHHHHHHHHHHHcC-C--CCCcceEEeH--HHHHHHHHHHHhCCCCceEEEeC
Confidence              24588999999999 6  7888999999  99999999999999999999874

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*

Probab=100.00  E-value=2.1e-49  Score=364.22  Aligned_cols=310  Identities=23%  Similarity=0.317  Sum_probs=266.5

Q ss_pred             ccchhcceeEEEecC---CceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEe
Q 017916           12 EDGEEVNMAAWLLGV---NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV   88 (364)
Q Consensus        12 ~~~~~~~~~~~~~~~---~~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~v   88 (364)
                      ++++.+|+++++.++   +.+++.+.|.|+++++||+|||++++||++|++.+.|.+.    ..+|.++|||++|+|+++
T Consensus         3 ~~~p~~mka~~~~~~g~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~----~~~P~i~G~e~~G~V~~v   78 (334)
T 3qwb_A            3 CTIPEQQKVILIDEIGGYDVIKYEDYPVPSISEEELLIKNKYTGVNYIESYFRKGIYP----CEKPYVLGREASGTVVAK   78 (334)
T ss_dssp             --CCSEEEEEEESSSSSGGGEEEEEEECCCCCTTEEEEEEEEEECCTTHHHHHHTSSC----CCSSEECCSEEEEEEEEE
T ss_pred             CCCchheEEEEEecCCCCceeEEEeccCCCCCCCEEEEEEEEEecCHHHHHHHCCCCC----CCCCCccccceEEEEEEE
Confidence            346677999999854   4599999999999999999999999999999998887543    457999999999999999


Q ss_pred             CCCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEec-CCceEECCCCCCccc---hhhh
Q 017916           89 GSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHP-ADLCFKLPDNVSLEE---GAMC  164 (364)
Q Consensus        89 G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-~~~~~~lP~~~~~~~---aa~~  164 (364)
                      |+++++|++||+|++.                             .+|+|+||++++ +++++++|+++++++   |+.+
T Consensus        79 G~~v~~~~~GdrV~~~-----------------------------~~G~~aey~~v~~~~~~~~~P~~~~~~~~~~aa~~  129 (334)
T 3qwb_A           79 GKGVTNFEVGDQVAYI-----------------------------SNSTFAQYSKISSQGPVMKLPKGTSDEELKLYAAG  129 (334)
T ss_dssp             CTTCCSCCTTCEEEEE-----------------------------CSSCSBSEEEEETTSSEEECCTTCCHHHHHHHHHH
T ss_pred             CCCCCCCCCCCEEEEe-----------------------------eCCcceEEEEecCcceEEECCCCCCHHHhhhhhhh
Confidence            9999999999999875                             359999999999 999999999999999   6644


Q ss_pred             -hhhHHHHHHHHH-cCCCCCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHH
Q 017916          165 -EPLSVGLHACRR-ANIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIA  241 (364)
Q Consensus       165 -~~~~~a~~~l~~-~~~~~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~  241 (364)
                       ..+.+||+++.. .++++|++|||+|+ |++|++++|+|+.+|+ .|+++++++++.++++++|++.++++..  +++.
T Consensus       130 ~~~~~ta~~~l~~~~~~~~g~~vlV~Ga~g~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~~ga~~~~~~~~--~~~~  206 (334)
T 3qwb_A          130 LLQVLTALSFTNEAYHVKKGDYVLLFAAAGGVGLILNQLLKMKGA-HTIAVASTDEKLKIAKEYGAEYLINASK--EDIL  206 (334)
T ss_dssp             HHHHHHHHHHHHTTSCCCTTCEEEESSTTBHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHTTCSEEEETTT--SCHH
T ss_pred             hhHHHHHHHHHHHhccCCCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCcEEEeCCC--chHH
Confidence             478899999964 79999999999996 9999999999999999 6888889999999999999999888654  6777


Q ss_pred             HHHHHHHHHcCCCccEEEECCCCHHHHHHHHHhcccCCEEEEEcCCCCCc-cccchhhhhcCcEEEeeccC---------
Q 017916          242 EEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEM-TVPLTPAAVREVDVVGVFRY---------  311 (364)
Q Consensus       242 ~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~---------  311 (364)
                      +.++++.  .+.++|++|||+|. +.+..++++|+++|+++.+|...... .++...+..+++++.+....         
T Consensus       207 ~~~~~~~--~~~g~D~vid~~g~-~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  283 (334)
T 3qwb_A          207 RQVLKFT--NGKGVDASFDSVGK-DTFEISLAALKRKGVFVSFGNASGLIPPFSITRLSPKNITLVRPQLYGYIADPEEW  283 (334)
T ss_dssp             HHHHHHT--TTSCEEEEEECCGG-GGHHHHHHHEEEEEEEEECCCTTCCCCCBCGGGGTTTTCEEECCCGGGGSCSHHHH
T ss_pred             HHHHHHh--CCCCceEEEECCCh-HHHHHHHHHhccCCEEEEEcCCCCCCCCcchhhhhhCceEEEEEEeccccCCHHHH
Confidence            7777654  25689999999995 78899999999999999998654432 55666778899999875432         


Q ss_pred             CCcHHHHHHHHHcCCCCCCCceEEEeeCChhhHHHHHHHHhcCCCceEEEEeC
Q 017916          312 KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  364 (364)
Q Consensus       312 ~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  364 (364)
                      .+.++++++++++|++  ++.+++.|++  +++++||+.++++...||+|+++
T Consensus       284 ~~~~~~~~~l~~~g~l--~~~i~~~~~l--~~~~~A~~~~~~~~~~gKvvi~~  332 (334)
T 3qwb_A          284 KYYSDEFFGLVNSKKL--NIKIYKTYPL--RDYRTAAADIESRKTVGKLVLEI  332 (334)
T ss_dssp             HHHHHHHHHHHHTTSS--CCCEEEEEEG--GGHHHHHHHHHTTCCCBEEEEEC
T ss_pred             HHHHHHHHHHHHCCCc--cCceeeEEcH--HHHHHHHHHHHhCCCceEEEEec
Confidence            2235789999999999  5568899999  99999999999999999999975

>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*

Probab=100.00  E-value=4.1e-51  Score=380.08  Aligned_cols=327  Identities=20%  Similarity=0.314  Sum_probs=278.6

Q ss_pred             ceeEEEecCCc-eEEEEecCCCCCC-CcEEEEEeeeeeCcccHhhhhh--cccCCccCCC---CcccccceeEEEEEeCC
Q 017916           18 NMAAWLLGVNT-LKIQPFELPSLGP-YDVLVRMKAVGICGSDVHYLKT--LRCADFVVKE---PMVIGHECAGVIEKVGS   90 (364)
Q Consensus        18 ~~~~~~~~~~~-~~~~~~~~p~~~~-~~VlV~v~~~~l~~~d~~~~~g--~~~~~~~~~~---p~~~G~e~~G~V~~vG~   90 (364)
                      |+++++.++.. +++.+.|.|++++ +||+|||+++++|++|++.+.|  .+.   ...+   |.++|||++|+|++  +
T Consensus         1 MkA~~~~~~g~~l~~~~~~~P~~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~---~~~~~~~p~v~G~E~~G~V~~--~   75 (366)
T 2cdc_A            1 MKAIIVKPPNAGVQVKDVDEKKLDSYGKIKIRTIYNGICGADREIVNGKLTLS---TLPKGKDFLVLGHEAIGVVEE--S   75 (366)
T ss_dssp             CEEEEECTTSCCCEEEECCGGGSCCCSSEEEEEEEEEECHHHHHHHTTCC----------CCSCEECCSEEEEEECS--C
T ss_pred             CeEEEEeCCCCceEEEECcCCCCCCCCEEEEEEEEEeeccccHHHHcCCCCCC---CCCcCCCCCcCCcceEEEEEe--C
Confidence            57888887665 9999999999999 9999999999999999999887  432   1345   89999999999999  6


Q ss_pred             CCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCcccc--ccCCCCCcceeEEEecCCceEECCCCCCccchhhhhhhH
Q 017916           91 EVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFF--ATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLS  168 (364)
Q Consensus        91 ~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~g~~~~~v~~~~~~~~~lP~~~~~~~aa~~~~~~  168 (364)
                      + ++|++||||++.+..+|..|.+|+.++.++|.+..+.  +....+|+|+||+++++++++++|++++ ++|+++.++.
T Consensus        76 ~-~~~~~GDrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~g~~~~~G~~aey~~v~~~~~~~iP~~l~-~~Aal~~~~~  153 (366)
T 2cdc_A           76 Y-HGFSQGDLVMPVNRRGCGICRNCLVGRPDFCETGEFGEAGIHKMDGFMREWWYDDPKYLVKIPKSIE-DIGILAQPLA  153 (366)
T ss_dssp             C-SSCCTTCEEEECSEECCSSSHHHHTTCGGGCSSSCCEEETTBEECCSCBSEEEECGGGEEEECGGGT-TTGGGHHHHH
T ss_pred             C-CCCCCCCEEEEcCCCCCCCChhhhCcCcccCCCCCcccCCccCCCCceeEEEEechHHeEECcCCcc-hhhhhcCcHH
Confidence            7 8999999999999999999999999999999987665  3212579999999999999999999999 8887767999


Q ss_pred             HHHHHHH-----HcCCC--C-------CCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecCh---hHHHHHHHcCCCeEE
Q 017916          169 VGLHACR-----RANIG--P-------ETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDD---YRLSVAKELGADNIV  231 (364)
Q Consensus       169 ~a~~~l~-----~~~~~--~-------g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~---~~~~~~~~lg~~~~~  231 (364)
                      |||++++     .++++  +       |++|||+|+|++|++++|+|+.+|+ .|+++++++   ++.++++++|++.+ 
T Consensus       154 ta~~al~~~~~~~~~~~~~~~~~~~~~g~~VlV~GaG~vG~~~~q~a~~~Ga-~Vi~~~~~~~~~~~~~~~~~~ga~~v-  231 (366)
T 2cdc_A          154 DIEKSIEEILEVQKRVPVWTCDDGTLNCRKVLVVGTGPIGVLFTLLFRTYGL-EVWMANRREPTEVEQTVIEETKTNYY-  231 (366)
T ss_dssp             HHHHHHHHHHHHGGGSSCCSCTTSSSTTCEEEEESCHHHHHHHHHHHHHHTC-EEEEEESSCCCHHHHHHHHHHTCEEE-
T ss_pred             HHHHHHHhhhhcccCccccccccccCCCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEeCCccchHHHHHHHHhCCcee-
Confidence            9999997     78888  8       9999999999999999999999999 788888888   89999999999877 


Q ss_pred             ecCCCcccHHHHHHHHHHHcCCCccEEEECCCCHHHH-HHHHHhcccCCEEEEEcCCCCC-ccccchh---hhhcCcEEE
Q 017916          232 KVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTM-STALSATRAGGKVCLVGMGHHE-MTVPLTP---AAVREVDVV  306 (364)
Q Consensus       232 ~~~~~~~~~~~~i~~~~~~~~~~~d~vid~~g~~~~~-~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~---~~~~~~~~~  306 (364)
                      + .+   ++.+.+++ .   +.++|++||++|....+ +.++++|+++|+++.+|..... ..++...   ++.+++++.
T Consensus       232 ~-~~---~~~~~~~~-~---~~~~d~vid~~g~~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~i~  303 (366)
T 2cdc_A          232 N-SS---NGYDKLKD-S---VGKFDVIIDATGADVNILGNVIPLLGRNGVLGLFGFSTSGSVPLDYKTLQEIVHTNKTII  303 (366)
T ss_dssp             E-CT---TCSHHHHH-H---HCCEEEEEECCCCCTHHHHHHGGGEEEEEEEEECSCCCSCEEEEEHHHHHHHHHTTCEEE
T ss_pred             c-hH---HHHHHHHH-h---CCCCCEEEECCCChHHHHHHHHHHHhcCCEEEEEecCCCCccccChhhhHHHHhcCcEEE
Confidence            5 32   56666665 3   26899999999977788 8999999999999999865443 3455555   788999999


Q ss_pred             eeccC-CCcHHHHHHHHHcCCCC----CCCceEEEeeCChhhHHHHHHH--HhcCCCceEEEEeC
Q 017916          307 GVFRY-KNTWPLCLELLRSGKID----VKPLVTHRFGFSQKEVEEAFET--SARGGTAIKVMFNL  364 (364)
Q Consensus       307 ~~~~~-~~~~~~~~~~l~~g~~~----~~~~~~~~~~~~~~~~~~a~~~--~~~~~~~gkvvv~~  364 (364)
                      +.... .+.++++++++++|++.    +++.++++|+|  +++++|++.  ++ +...||+|+++
T Consensus       304 g~~~~~~~~~~~~~~l~~~g~i~~~~~~~~~i~~~~~l--~~~~~A~~~l~~~-~~~~gKvvi~~  365 (366)
T 2cdc_A          304 GLVNGQKPHFQQAVVHLASWKTLYPKAAKMLITKTVSI--NDEKELLKVLREK-EHGEIKIRILW  365 (366)
T ss_dssp             ECCCCCHHHHHHHHHHHHHHHHHSHHHHTTSEEEEEET--TCHHHHHHHHHCC-CTTCCEEEEEC
T ss_pred             EecCCCHHHHHHHHHHHHcCCCCcccchhhcEEEEEcH--HHHHHHHHHHhhh-cCCceEEEEec
Confidence            98765 56799999999999965    57888999999  999999999  55 66789999975

>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*

Probab=100.00  E-value=1.1e-48  Score=364.06  Aligned_cols=316  Identities=20%  Similarity=0.238  Sum_probs=258.7

Q ss_pred             ccchhcceeEEEecCCceEEE-EecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCC
Q 017916           12 EDGEEVNMAAWLLGVNTLKIQ-PFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGS   90 (364)
Q Consensus        12 ~~~~~~~~~~~~~~~~~~~~~-~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~   90 (364)
                      |+++.+|+++++.+++.+++. +.|.|+++++||+|||++++||++|++++.+.      ...|.++|||++|+|+++|+
T Consensus         6 m~~p~~mkA~v~~~~~~l~~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~------~~~p~v~G~e~~G~V~~vG~   79 (371)
T 3gqv_A            6 FIPPPQQTALTVNDHDEVTVWNAAPCPMLPRDQVYVRVEAVAINPSDTSMRGQF------ATPWAFLGTDYAGTVVAVGS   79 (371)
T ss_dssp             CCCCSCEEEEEECTTSCEEEEEEECCCCCCTTSEEEEEEEEECCGGGGC-----------CCTTSCCCSEEEEEEEEECT
T ss_pred             CCCchhceeEEEcCCCceEEeccCCCCCCCCCEEEEEEEEEEcCHHHHHHhhcC------CCCCccCccccEEEEEEeCC
Confidence            557788999999999999999 99999999999999999999999999987652      34689999999999999999


Q ss_pred             CCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCccchhhhh-hhHH
Q 017916           91 EVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSV  169 (364)
Q Consensus        91 ~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~lP~~~~~~~aa~~~-~~~~  169 (364)
                      +|++|++||+|++.       |..|..+             ...+|+|+||+++++++++++|+++++++|++++ .+.|
T Consensus        80 ~v~~~~~GdrV~~~-------~~~~~~~-------------~~~~G~~aey~~v~~~~~~~~P~~~~~~~aa~~~~~~~t  139 (371)
T 3gqv_A           80 DVTHIQVGDRVYGA-------QNEMCPR-------------TPDQGAFSQYTVTRGRVWAKIPKGLSFEQAAALPAGIST  139 (371)
T ss_dssp             TCCSCCTTCEEEEE-------CCTTCTT-------------CTTCCSSBSEEECCTTCEEECCTTCCHHHHHTSHHHHHH
T ss_pred             CCCCCCCCCEEEEe-------ccCCCCC-------------CCCCCcCcCeEEEchhheEECCCCCCHHHHhhhhhhHHH
Confidence            99999999999875       3333322             1357999999999999999999999999999776 6789


Q ss_pred             HHHHH-HH-cCC-----------CCCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCC
Q 017916          170 GLHAC-RR-ANI-----------GPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVST  235 (364)
Q Consensus       170 a~~~l-~~-~~~-----------~~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~  235 (364)
                      ||+++ +. .++           ++|++|||+|+ |++|++++|+|+.+|+ .|+++. +++|.++++++|+++++++..
T Consensus       140 a~~~l~~~~~~~~~~~~~~~~~~~~g~~VlV~Ga~G~vG~~a~qla~~~Ga-~Vi~~~-~~~~~~~~~~lGa~~vi~~~~  217 (371)
T 3gqv_A          140 AGLAMKLLGLPLPSPSADQPPTHSKPVYVLVYGGSTATATVTMQMLRLSGY-IPIATC-SPHNFDLAKSRGAEEVFDYRA  217 (371)
T ss_dssp             HHHHHHHHTCCCCCSSCSSCCCCSSCCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEE-CGGGHHHHHHTTCSEEEETTS
T ss_pred             HHHHHHhhccCCCCCccccccccCCCcEEEEECCCcHHHHHHHHHHHHCCC-EEEEEe-CHHHHHHHHHcCCcEEEECCC
Confidence            99999 55 443           89999999998 9999999999999999 566664 789999999999999998754


Q ss_pred             CcccHHHHHHHHHHHcCCCccEEEECCCCHHHHHHHHHhc-ccCCEEEEEcCCCC------Ccccc---chhhhhcCcEE
Q 017916          236 NLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSAT-RAGGKVCLVGMGHH------EMTVP---LTPAAVREVDV  305 (364)
Q Consensus       236 ~~~~~~~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l-~~~G~~v~~g~~~~------~~~~~---~~~~~~~~~~~  305 (364)
                        +++.+.+++++   ++++|++|||+|++..+..++++| +++|+++.+|....      .....   ...+..+++++
T Consensus       218 --~~~~~~v~~~t---~g~~d~v~d~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~k~~~~  292 (371)
T 3gqv_A          218 --PNLAQTIRTYT---KNNLRYALDCITNVESTTFCFAAIGRAGGHYVSLNPFPEHAATRKMVTTDWTLGPTIFGEGSTW  292 (371)
T ss_dssp             --TTHHHHHHHHT---TTCCCEEEESSCSHHHHHHHHHHSCTTCEEEEESSCCCC---CCSCEEEEECCGGGGGTSCBSC
T ss_pred             --chHHHHHHHHc---cCCccEEEECCCchHHHHHHHHHhhcCCCEEEEEecCccccccccccceeeeeeeeeccccccc
Confidence              67888777764   446999999999888999999999 59999999984322      11111   12356678888


Q ss_pred             EeeccC----------CCcHHHHHHHHHcCCCCCCCceEEEeeCChhhHHHHHHHHhcCCCceEEEE
Q 017916          306 VGVFRY----------KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMF  362 (364)
Q Consensus       306 ~~~~~~----------~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv  362 (364)
                      .+.+..          .+.++++++++++|++.+.+.+.+.|+|  +++++||+.+++++..||+|+
T Consensus       293 ~g~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~~~l--~~~~~A~~~l~~g~~~Gkkvv  357 (371)
T 3gqv_A          293 PAPYGRPGSEEERQFGEDLWRIAGQLVEDGRLVHHPLRVVQGGF--DHIKQGMELVRKGELSGEKLV  357 (371)
T ss_dssp             STTTCBCCCHHHHHHHHHHHHHHHHHHHTTSSCCCCEEEEEECH--HHHHHHHHHHHTTCCSSCEEE
T ss_pred             cccccccccHHHHHHHHHHHHHHHHHHHCCeeeCCcCeecCCcH--HHHHHHHHHHHcCCCceEEEE
Confidence            776433          1234588899999999877777777888  999999999999988885543

>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}

Probab=100.00  E-value=1.1e-48  Score=360.97  Aligned_cols=305  Identities=19%  Similarity=0.233  Sum_probs=263.9

Q ss_pred             cceeEEEec------CCceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCC
Q 017916           17 VNMAAWLLG------VNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGS   90 (364)
Q Consensus        17 ~~~~~~~~~------~~~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~   90 (364)
                      +|+|+++..      ++.+++.+.|.|+++++||+|||.+++||++|++.+.|.     ...+|.++|||++|+|+++|+
T Consensus         2 ~MkA~~~~~~G~~~~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~-----~~~~p~i~G~e~~G~V~~vG~   76 (346)
T 3fbg_A            2 SLKAIGFEQPFKLSDGNLFKTFNLDIPEPKVHEILVKIQSISVNPVDTKQRLMD-----VSKAPRVLGFDAIGVVESVGN   76 (346)
T ss_dssp             CEEEEEBSSCCCGGGCCCCEEEEECCCCCCTTEEEEEEEEEEECHHHHHHTTSC-----CSSSCBCCCCCEEEEEEEECT
T ss_pred             CcEEEEEEeccccCCCceeEeccccCCCCCCCEEEEEEEEEEcCHHHHHHHhCC-----CCCCCcCcCCccEEEEEEeCC
Confidence            478888773      578999999999999999999999999999999988764     246799999999999999999


Q ss_pred             CCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCccchhhhh-hhHH
Q 017916           91 EVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSV  169 (364)
Q Consensus        91 ~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~lP~~~~~~~aa~~~-~~~~  169 (364)
                      ++++|++||+|++...                         ...+|+|+||+++++++++++|+++++++|++++ .+.|
T Consensus        77 ~v~~~~~GdrV~~~~~-------------------------~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~~~~~~~t  131 (346)
T 3fbg_A           77 EVTMFNQGDIVYYSGS-------------------------PDQNGSNAEYQLINERLVAKAPKNISAEQAVSLPLTGIT  131 (346)
T ss_dssp             TCCSCCTTCEEEECCC-------------------------TTSCCSSBSEEEEEGGGEEECCSSSCHHHHTTSHHHHHH
T ss_pred             CCCcCCCCCEEEEcCC-------------------------CCCCcceeEEEEEChHHeEECCCCCCHHHhhhcchhHHH
Confidence            9999999999987521                         1356999999999999999999999999999776 6779


Q ss_pred             HHHHH-HHcCCC------CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHH
Q 017916          170 GLHAC-RRANIG------PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIA  241 (364)
Q Consensus       170 a~~~l-~~~~~~------~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~  241 (364)
                      ||+++ +.++++      +|++|||+|+ |++|++++|+|+.+|+ .|+++++++++.++++++|++.++++.   +++.
T Consensus       132 a~~~l~~~~~~~~~~~~~~g~~VlV~gg~G~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~~~lGa~~vi~~~---~~~~  207 (346)
T 3fbg_A          132 AYETLFDVFGISRNRNENEGKTLLIINGAGGVGSIATQIAKAYGL-RVITTASRNETIEWTKKMGADIVLNHK---ESLL  207 (346)
T ss_dssp             HHHHHHTTSCCCSSHHHHTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEECCSHHHHHHHHHHTCSEEECTT---SCHH
T ss_pred             HHHHHHHhcCCccccccCCCCEEEEEcCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhcCCcEEEECC---ccHH
Confidence            99999 568888      9999999965 9999999999999999 789998999999999999999998864   3677


Q ss_pred             HHHHHHHHHcCCCccEEEECCCCHHHHHHHHHhcccCCEEEEEcCCCCCccccchhhhhcCcEEEeeccC----------
Q 017916          242 EEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY----------  311 (364)
Q Consensus       242 ~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~----------  311 (364)
                      +.+++.   .+.++|++|||+|++..++.++++|+++|+++.++..  ...++...+..+++++.+.+.+          
T Consensus       208 ~~~~~~---~~~g~Dvv~d~~g~~~~~~~~~~~l~~~G~iv~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  282 (346)
T 3fbg_A          208 NQFKTQ---GIELVDYVFCTFNTDMYYDDMIQLVKPRGHIATIVAF--ENDQDLNALKPKSLSFSHEFMFARPLNQTDDM  282 (346)
T ss_dssp             HHHHHH---TCCCEEEEEESSCHHHHHHHHHHHEEEEEEEEESSCC--SSCBCGGGGTTTTCEEEECCTTHHHHTTCTTT
T ss_pred             HHHHHh---CCCCccEEEECCCchHHHHHHHHHhccCCEEEEECCC--CCCCccccccccceEEEEEEEecccccchhhH
Confidence            777665   4678999999999777789999999999999988743  2345556677889999886543          


Q ss_pred             ---CCcHHHHHHHHHcCCCCCCCceEEEe---eCChhhHHHHHHHHhcCCCceEEEEeC
Q 017916          312 ---KNTWPLCLELLRSGKIDVKPLVTHRF---GFSQKEVEEAFETSARGGTAIKVMFNL  364 (364)
Q Consensus       312 ---~~~~~~~~~~l~~g~~~~~~~~~~~~---~~~~~~~~~a~~~~~~~~~~gkvvv~~  364 (364)
                         .+.++++++++++|++  ++.+.++|   ++  +++++|++.++++...||+|+++
T Consensus       283 ~~~~~~~~~~~~l~~~g~l--~~~i~~~~~~~~l--~~~~~A~~~~~~g~~~GKvvl~~  337 (346)
T 3fbg_A          283 IKHHEYLEDITNKVEQNIY--QPTTTKVIEGLTT--ENIYQAHQILESNTMIGKLVINL  337 (346)
T ss_dssp             HHHHHHHHHHHHHHHTTSS--CCCEEEEEESCCH--HHHHHHHHHHHTTCCCSEEEEEC
T ss_pred             HHHHHHHHHHHHHHHCCCE--ECCccceecCCCH--HHHHHHHHHHhcCCcceEEEEec
Confidence               2457889999999998  77788887   67  99999999999999999999974

>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}

Probab=100.00  E-value=4.3e-49  Score=365.65  Aligned_cols=315  Identities=18%  Similarity=0.213  Sum_probs=264.7

Q ss_pred             ccccchhcceeEEEe------cCCceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeE
Q 017916           10 EKEDGEEVNMAAWLL------GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAG   83 (364)
Q Consensus        10 ~~~~~~~~~~~~~~~------~~~~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G   83 (364)
                      .+..++++|+++++.      +++.+++.+.|.|+++++||+|||++++||++|+..+.|.+..   ..+|.++|+|++|
T Consensus        15 ~~~~~m~~MkA~~~~~~~~~~~~~~l~~~~~p~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~---~~~p~v~G~E~~G   91 (363)
T 4dvj_A           15 TENLYFQSMKAVGYNKPAPITDDASLLDIELPKPAPAGHDILVEVKAVSVNPVDYKVRRSTPPD---GTDWKVIGYDAAG   91 (363)
T ss_dssp             ----CCCEEEEEEBSSCCCTTSTTSSEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHHHCCC-----CCSBCCCCCEEE
T ss_pred             chhhhhheeEEEEEeccCCCCCCceEEEeecCCCCCCCCEEEEEEEEEEeCHHHHHHHcCCCCC---CCCCCcccceeEE
Confidence            344455678999884      4678999999999999999999999999999999999886532   4679999999999


Q ss_pred             EEEEeCCCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCccchhh
Q 017916           84 VIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAM  163 (364)
Q Consensus        84 ~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~lP~~~~~~~aa~  163 (364)
                      +|+++|++|++|++||+|++.+.                         ...+|+|+||++++++.++++|+++++++||+
T Consensus        92 ~V~~vG~~v~~~~vGdrV~~~~~-------------------------~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~  146 (363)
T 4dvj_A           92 IVSAVGPDVTLFRPGDEVFYAGS-------------------------IIRPGTNAEFHLVDERIVGRKPKTLDWAEAAA  146 (363)
T ss_dssp             EEEEECTTCCSCCTTCEEEECCC-------------------------TTSCCSCBSEEEEEGGGCEECCTTSCHHHHHT
T ss_pred             EEEEeCCCCCCCCCCCEEEEccC-------------------------CCCCccceEEEEeCHHHeeECCCCCCHHHHHh
Confidence            99999999999999999987421                         12569999999999999999999999999998


Q ss_pred             hh-hhHHHHHHH-HHcCCC-----CCCEEEEEcC-CHHHHHHHHHHHHC-CCCEEEEEecChhHHHHHHHcCCCeEEecC
Q 017916          164 CE-PLSVGLHAC-RRANIG-----PETNVLIMGA-GPIGLVTMLGARAF-GAPRIVIVDVDDYRLSVAKELGADNIVKVS  234 (364)
Q Consensus       164 ~~-~~~~a~~~l-~~~~~~-----~g~~VLI~Ga-g~~G~~ai~la~~~-g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~  234 (364)
                      ++ .+.|||+++ +.++++     +|++|||+|+ |++|++++|+|+.+ |+ .|++++.+++|.++++++|++.++++.
T Consensus       147 l~~~~~ta~~al~~~~~~~~~~~~~g~~VlV~Ga~G~vG~~a~qlak~~~g~-~Vi~~~~~~~~~~~~~~lGad~vi~~~  225 (363)
T 4dvj_A          147 LPLTSITAWEAFFDRLDVNKPVPGAAPAILIVGGAGGVGSIAVQIARQRTDL-TVIATASRPETQEWVKSLGAHHVIDHS  225 (363)
T ss_dssp             SHHHHHHHHHHHHTTSCTTSCCTTSEEEEEEESTTSHHHHHHHHHHHHHCCS-EEEEECSSHHHHHHHHHTTCSEEECTT
T ss_pred             hhhHHHHHHHHHHHhhCcCcCcCCCCCEEEEECCCCHHHHHHHHHHHHhcCC-EEEEEeCCHHHHHHHHHcCCCEEEeCC
Confidence            76 678999998 568888     8999999995 99999999999985 77 789999999999999999999998864


Q ss_pred             CCcccHHHHHHHHHHHcCCCccEEEECCCCHHHHHHHHHhcccCCEEEEEcCCCCCccccchhhhhcCcEEEeeccC---
Q 017916          235 TNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY---  311 (364)
Q Consensus       235 ~~~~~~~~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~---  311 (364)
                         +++.+.++++   .++++|++|||+|++..++.++++|+++|+++.++..   ..++...+..+++++.+....   
T Consensus       226 ---~~~~~~v~~~---~~~g~Dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~---~~~~~~~~~~k~~~i~~~~~~~~~  296 (363)
T 4dvj_A          226 ---KPLAAEVAAL---GLGAPAFVFSTTHTDKHAAEIADLIAPQGRFCLIDDP---SAFDIMLFKRKAVSIHHELMFTRP  296 (363)
T ss_dssp             ---SCHHHHHHTT---CSCCEEEEEECSCHHHHHHHHHHHSCTTCEEEECSCC---SSCCGGGGTTTTCEEEECCTTHHH
T ss_pred             ---CCHHHHHHHh---cCCCceEEEECCCchhhHHHHHHHhcCCCEEEEECCC---CccchHHHhhccceEEEEEeeccc
Confidence               3666666654   4678999999999777899999999999999999632   345566677889999886543   


Q ss_pred             ----------CCcHHHHHHHHHcCCCCCCCceEEEe-eCChhhHHHHHHHHhcCCCceEEEEeC
Q 017916          312 ----------KNTWPLCLELLRSGKIDVKPLVTHRF-GFSQKEVEEAFETSARGGTAIKVMFNL  364 (364)
Q Consensus       312 ----------~~~~~~~~~~l~~g~~~~~~~~~~~~-~~~~~~~~~a~~~~~~~~~~gkvvv~~  364 (364)
                                .+.++++++++++|++  ++.+.++| .++++++++|++.++++...||+|+++
T Consensus       297 ~~~~~~~~~~~~~~~~~~~l~~~g~l--~~~i~~~~~~~~l~~~~~A~~~~~~~~~~GKvVl~~  358 (363)
T 4dvj_A          297 MFGTPDMSEQGRLLNDVSRLVDEGRL--RTTLTNRLSPINAANLKQAHALVESGTARGKVVIEG  358 (363)
T ss_dssp             HHTCTTTHHHHHHHHHHHHHHHHTSS--CCCEEEEECSCSHHHHHHHHHHHHHTCCCSEEEEEC
T ss_pred             cccCcchhhHHHHHHHHHHHHHCCCe--eccccceecCCCHHHHHHHHHHHHhCCCceEEEEeC
Confidence                      2357899999999999  67777777 223399999999999999999999975

>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}

Probab=100.00  E-value=2.4e-49  Score=361.78  Aligned_cols=306  Identities=18%  Similarity=0.214  Sum_probs=256.7

Q ss_pred             hcceeEEEec---CCceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhc--ccCCccCCCCcccccceeEEEEEeCC
Q 017916           16 EVNMAAWLLG---VNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTL--RCADFVVKEPMVIGHECAGVIEKVGS   90 (364)
Q Consensus        16 ~~~~~~~~~~---~~~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~--~~~~~~~~~p~~~G~e~~G~V~~vG~   90 (364)
                      .+|+++++..   ++.+++.+.|.|+++++||+|||+++++|++|++.+.|.  +.......+|.++|||++|+|+++|+
T Consensus         5 ~~Mka~~~~~~g~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~~~p~v~G~E~~G~V~~vG~   84 (321)
T 3tqh_A            5 KEMKAIQFDQFGPPKVLKLVDTPTPEYRKNQMLIKVHAASLNPIDYKTRNGSGFVAKKLKNNLPSGLGYDFSGEVIELGS   84 (321)
T ss_dssp             CEEEEEEESSSCSGGGEEEEEEECCCCCTTCEEEEEEEEECCHHHHHHHTTCSHHHHHHTTSCSBCCCCEEEEEEEEECT
T ss_pred             ccceEEEEccCCCcceeEEEecCCCCCCCCEEEEEEEEEEcCHHHHHHhcCCccccccccCCCCCcccceeEEEEEEeCC
Confidence            4588998885   355999999999999999999999999999999998872  21112357899999999999999999


Q ss_pred             CCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCccchhhhh-hhHH
Q 017916           91 EVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSV  169 (364)
Q Consensus        91 ~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~lP~~~~~~~aa~~~-~~~~  169 (364)
                      ++++|++||+|++.+..                        ...+|+|+||+++++++++++|+++++++|++++ .+.|
T Consensus        85 ~v~~~~~GdrV~~~~~~------------------------~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~t  140 (321)
T 3tqh_A           85 DVNNVNIGDKVMGIAGF------------------------PDHPCCYAEYVCASPDTIIQKLEKLSFLQAASLPTAGLT  140 (321)
T ss_dssp             TCCSCCTTCEEEEECST------------------------TTCCCCSBSEEEECGGGEEECCTTSCHHHHHHSHHHHHH
T ss_pred             CCCCCCCCCEEEEccCC------------------------CCCCCcceEEEEecHHHhccCCCCCCHHHHhhhhhHHHH
Confidence            99999999999986421                        1246999999999999999999999999999876 6779


Q ss_pred             HHHHHHHcCCCCCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCccc-HHHHHHHH
Q 017916          170 GLHACRRANIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQD-IAEEVEKI  247 (364)
Q Consensus       170 a~~~l~~~~~~~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~-~~~~i~~~  247 (364)
                      ||++++.+++++|++|||+|+ |++|++++|+|+.+|+ .|+++. ++++.++++++|+++++++..  ++ +.+.    
T Consensus       141 a~~al~~~~~~~g~~vlV~Ga~G~vG~~a~q~a~~~Ga-~vi~~~-~~~~~~~~~~lGa~~~i~~~~--~~~~~~~----  212 (321)
T 3tqh_A          141 ALQALNQAEVKQGDVVLIHAGAGGVGHLAIQLAKQKGT-TVITTA-SKRNHAFLKALGAEQCINYHE--EDFLLAI----  212 (321)
T ss_dssp             HHHHHHHTTCCTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEE-CHHHHHHHHHHTCSEEEETTT--SCHHHHC----
T ss_pred             HHHHHHhcCCCCCCEEEEEcCCcHHHHHHHHHHHHcCC-EEEEEe-ccchHHHHHHcCCCEEEeCCC--cchhhhh----
Confidence            999998899999999999985 9999999999999999 566665 667789999999999988754  33 3322    


Q ss_pred             HHHcCCCccEEEECCCCHHHHHHHHHhcccCCEEEEEcCCCCCccccchhhhhcCcEEEeeccC--CCcHHHHHHHHHcC
Q 017916          248 QKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY--KNTWPLCLELLRSG  325 (364)
Q Consensus       248 ~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~g  325 (364)
                          -.++|++|||+|+ +....++++|+++|+++.++.....  ........+++++.+....  .+.++++++++++|
T Consensus       213 ----~~g~D~v~d~~g~-~~~~~~~~~l~~~G~iv~~g~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g  285 (321)
T 3tqh_A          213 ----STPVDAVIDLVGG-DVGIQSIDCLKETGCIVSVPTITAG--RVIEVAKQKHRRAFGLLKQFNIEELHYLGKLVSED  285 (321)
T ss_dssp             ----CSCEEEEEESSCH-HHHHHHGGGEEEEEEEEECCSTTHH--HHHHHHHHTTCEEECCCCCCCHHHHHHHHHHHHTT
T ss_pred             ----ccCCCEEEECCCc-HHHHHHHHhccCCCEEEEeCCCCch--hhhhhhhhcceEEEEEecCCCHHHHHHHHHHHHCC
Confidence                2579999999995 5559999999999999998743321  1223456788888885433  56799999999999


Q ss_pred             CCCCCCceEEEeeCChhhHHHHHHHHhcCCCceEEEEeC
Q 017916          326 KIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  364 (364)
Q Consensus       326 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  364 (364)
                      ++  ++.+.++|+|  +++++||+.++++...||+|+++
T Consensus       286 ~l--~~~i~~~~~l--~~~~~A~~~~~~~~~~gKvvl~~  320 (321)
T 3tqh_A          286 KL--RIEISRIFQL--SEAVTAHELLETGHVRGKLVFKV  320 (321)
T ss_dssp             SS--CCCEEEEECG--GGHHHHHHHHHTTCCCSEEEEEC
T ss_pred             Cc--ccccccEEcH--HHHHHHHHHHHcCCCCceEEEEe
Confidence            98  6678999999  99999999999999999999975

>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}

Probab=100.00  E-value=2.2e-48  Score=358.51  Aligned_cols=310  Identities=22%  Similarity=0.303  Sum_probs=263.1

Q ss_pred             hhcceeEEEecCCc-eEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCCCCC
Q 017916           15 EEVNMAAWLLGVNT-LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVK   93 (364)
Q Consensus        15 ~~~~~~~~~~~~~~-~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~   93 (364)
                      +.+|+++++.++.. +++.+.|.|+++++||+|||+++++|++|++++.|.... ....+|.++|||++|+|+++|++++
T Consensus         5 ~~~mka~~~~~~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~-~~~~~P~v~G~E~~G~V~~vG~~v~   83 (343)
T 3gaz_A            5 TPTMIAAVVEEANGPFVLRKLARPQPAPGQVLVQIEASGTNPLDAKIRAGEAPH-AQQPLPAILGMDLAGTVVAVGPEVD   83 (343)
T ss_dssp             -CEEEEEEECSTTCCEEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHTTCCGG-GCCCSSBCCCCEEEEEEEEECTTCC
T ss_pred             chhheEEEEecCCCceEEEeccCCCCCCCEEEEEEEEEEeCHhhHHHhCCCCCC-CCCCCCcccCcceEEEEEEECCCCC
Confidence            45689999987654 999999999999999999999999999999998875421 1256899999999999999999999


Q ss_pred             CCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCccchhhhh-hhHHHHH
Q 017916           94 TLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLH  172 (364)
Q Consensus        94 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~lP~~~~~~~aa~~~-~~~~a~~  172 (364)
                      +|++||+|++....                       ....+|+|+||+++++++++++|+++++++|++++ .+.|||+
T Consensus        84 ~~~vGdrV~~~~~g-----------------------~~~~~G~~aey~~v~~~~~~~~P~~~~~~~aa~l~~~~~ta~~  140 (343)
T 3gaz_A           84 SFRVGDAVFGLTGG-----------------------VGGLQGTHAQFAAVDARLLASKPAALTMRQASVLPLVFITAWE  140 (343)
T ss_dssp             SCCTTCEEEEECCS-----------------------STTCCCSSBSEEEEEGGGEEECCTTSCHHHHHTSHHHHHHHHH
T ss_pred             CCCCCCEEEEEeCC-----------------------CCCCCcceeeEEEecHHHeeeCCCCCCHHHHHHhhhhHHHHHH
Confidence            99999999874211                       11256999999999999999999999999999776 7789999


Q ss_pred             HH-HHcCCCCCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHH
Q 017916          173 AC-RRANIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKA  250 (364)
Q Consensus       173 ~l-~~~~~~~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~  250 (364)
                      ++ +.+++++|++|||+|+ |++|++++|+|+..|+ .|+++ .++++.++++++|++. ++   ..+++.+.+++.+  
T Consensus       141 ~l~~~~~~~~g~~VlV~Ga~g~iG~~~~q~a~~~Ga-~Vi~~-~~~~~~~~~~~lGa~~-i~---~~~~~~~~~~~~~--  212 (343)
T 3gaz_A          141 GLVDRAQVQDGQTVLIQGGGGGVGHVAIQIALARGA-RVFAT-ARGSDLEYVRDLGATP-ID---ASREPEDYAAEHT--  212 (343)
T ss_dssp             HHTTTTCCCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEE-ECHHHHHHHHHHTSEE-EE---TTSCHHHHHHHHH--
T ss_pred             HHHHhcCCCCCCEEEEecCCCHHHHHHHHHHHHCCC-EEEEE-eCHHHHHHHHHcCCCE-ec---cCCCHHHHHHHHh--
Confidence            99 7799999999999996 9999999999999999 67777 8899999999999987 55   3467777777664  


Q ss_pred             cCCCccEEEECCCCHHHHHHHHHhcccCCEEEEEcCCCCCccccchhhhhcCcEEEeeccC------------CCcHHHH
Q 017916          251 MGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY------------KNTWPLC  318 (364)
Q Consensus       251 ~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~  318 (364)
                      .+.++|++|||+| .+.+..++++|+++|+++.++...   ..+...+..+++++.+.+..            .+.++++
T Consensus       213 ~~~g~D~vid~~g-~~~~~~~~~~l~~~G~iv~~g~~~---~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~  288 (343)
T 3gaz_A          213 AGQGFDLVYDTLG-GPVLDASFSAVKRFGHVVSCLGWG---THKLAPLSFKQATYSGVFTLHTLLANEGLAHFGEMLREA  288 (343)
T ss_dssp             TTSCEEEEEESSC-THHHHHHHHHEEEEEEEEESCCCS---CCCCHHHHHTTCEEEECCTTHHHHHTCSHHHHHHHHHHH
T ss_pred             cCCCceEEEECCC-cHHHHHHHHHHhcCCeEEEEcccC---ccccchhhhcCcEEEEEEeccchhcccchHHHHHHHHHH
Confidence            3568999999999 478899999999999999997543   34556678899999987653            2568899


Q ss_pred             HHHHHcCCCCCCCceE-EEeeCChhhHHHHHHHHhcCC----CceEEEEeC
Q 017916          319 LELLRSGKIDVKPLVT-HRFGFSQKEVEEAFETSARGG----TAIKVMFNL  364 (364)
Q Consensus       319 ~~~l~~g~~~~~~~~~-~~~~~~~~~~~~a~~~~~~~~----~~gkvvv~~  364 (364)
                      ++++++|++  ++.+. ++|+|  +++++|++.+++++    ..||+++++
T Consensus       289 ~~l~~~g~l--~~~i~~~~~~l--~~~~~A~~~~~~~~~~Gr~~GK~v~~~  335 (343)
T 3gaz_A          289 DALVQTGKL--APRLDPRTFSI--AEIGSAYDAVLGRNDVPRQRGKIAITV  335 (343)
T ss_dssp             HHHHHTTCC--CCCBCSCCEET--TCHHHHHHHHHTCTTCCCCSSBCEEEC
T ss_pred             HHHHHCCCc--ccCccCcEecH--HHHHHHHHHHHcCCCcccccceEEEEe
Confidence            999999998  67777 78999  99999999999884    478888864

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}

Probab=100.00  E-value=1e-49  Score=368.44  Aligned_cols=314  Identities=18%  Similarity=0.180  Sum_probs=263.0

Q ss_pred             ccchhcceeEEEe------cCCceEEEEe---------cCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcc
Q 017916           12 EDGEEVNMAAWLL------GVNTLKIQPF---------ELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMV   76 (364)
Q Consensus        12 ~~~~~~~~~~~~~------~~~~~~~~~~---------~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~   76 (364)
                      |+++.+|+++++.      +++.+++.+.         |.|+++++||+|||++++||++|++.+.|.+..  ...+|.+
T Consensus         5 m~~p~~mka~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~--~~~~p~v   82 (349)
T 3pi7_A            5 MTIPSEMKALLLVGDGYTKTPSGSALEAMEPYLEQGRIAVPAPGPSQVLIKVNLASINPSDVAFIKGQYGQ--PRVKGRP   82 (349)
T ss_dssp             CCCCSEEEEEEECSCBSCSSCCCSCCCCSTTTEEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHTTCSSS--CBCTTSB
T ss_pred             CCCchhheEEEEEccccCCCcccceEEEeecccccccCCCCCCCCCeEEEEEEEecCCHHHHHHhcccCCC--CCCCCCC
Confidence            5567789999998      5678888888         999999999999999999999999999885432  2468999


Q ss_pred             cccceeEEEEEeCCCC-CCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCC
Q 017916           77 IGHECAGVIEKVGSEV-KTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDN  155 (364)
Q Consensus        77 ~G~e~~G~V~~vG~~v-~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~lP~~  155 (364)
                      +|||++|+|+++|++| ++|++||+|++...                         ...+|+|+||+++++++++++|++
T Consensus        83 ~G~E~~G~V~~vG~~v~~~~~vGdrV~~~~g-------------------------~~~~G~~aey~~v~~~~~~~iP~~  137 (349)
T 3pi7_A           83 AGFEGVGTIVAGGDEPYAKSLVGKRVAFATG-------------------------LSNWGSWAEYAVAEAAACIPLLDT  137 (349)
T ss_dssp             CCSEEEEEEEEECSSHHHHHHTTCEEEEECT-------------------------TSSCCSSBSEEEEEGGGEEECCTT
T ss_pred             ccceEEEEEEEECCCccCCCCCCCEEEEecc-------------------------CCCCccceeeEeechHHeEECCCC
Confidence            9999999999999999 99999999997631                         135799999999999999999999


Q ss_pred             CCccchhhhh-hhHHHHHHHHHcCCCCC-CEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEe
Q 017916          156 VSLEEGAMCE-PLSVGLHACRRANIGPE-TNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVK  232 (364)
Q Consensus       156 ~~~~~aa~~~-~~~~a~~~l~~~~~~~g-~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~  232 (364)
                      +++++||++. .+.|||++++.++ ++| ++|||+|+ |++|++++|+|+.+|+ .|++++.++++.++++++|++.+++
T Consensus       138 ~~~~~aa~l~~~~~ta~~~~~~~~-~~g~~~vli~gg~g~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~~~~Ga~~~~~  215 (349)
T 3pi7_A          138 VRDEDGAAMIVNPLTAIAMFDIVK-QEGEKAFVMTAGASQLCKLIIGLAKEEGF-RPIVTVRRDEQIALLKDIGAAHVLN  215 (349)
T ss_dssp             CCC--GGGSSHHHHHHHHHHHHHH-HHCCSEEEESSTTSHHHHHHHHHHHHHTC-EEEEEESCGGGHHHHHHHTCSEEEE
T ss_pred             CCHHHHhhccccHHHHHHHHHHHh-hCCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCCEEEE
Confidence            9999998664 7778997777766 777 68999965 9999999999999999 7888889999999999999999988


Q ss_pred             cCCCcccHHHHHHHHHHHcCCCccEEEECCCCHHHHHHHHHhcccCCEEEEEcCC-CCCccccc-hhhhhcCcEEEeecc
Q 017916          233 VSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMG-HHEMTVPL-TPAAVREVDVVGVFR  310 (364)
Q Consensus       233 ~~~~~~~~~~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~-~~~~~~~~-~~~~~~~~~~~~~~~  310 (364)
                      ++.  +++.+.+++++.  +.++|++|||+| ......++++|+++|+++.+|.. .....++. ..+..+++++.+.+.
T Consensus       216 ~~~--~~~~~~v~~~~~--~~g~D~vid~~g-~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~  290 (349)
T 3pi7_A          216 EKA--PDFEATLREVMK--AEQPRIFLDAVT-GPLASAIFNAMPKRARWIIYGRLDPDATVIREPGQLIFQHKHIEGFWL  290 (349)
T ss_dssp             TTS--TTHHHHHHHHHH--HHCCCEEEESSC-HHHHHHHHHHSCTTCEEEECCCSCCSCCCCSCTHHHHHSCCEEEECCH
T ss_pred             CCc--HHHHHHHHHHhc--CCCCcEEEECCC-ChhHHHHHhhhcCCCEEEEEeccCCCCCCCCchhhhhccccEEEEEEe
Confidence            643  678888877753  458999999999 55668999999999999999853 33345555 678889999999865


Q ss_pred             C----------CCcHHHHHHHHHcCCCCCCCceEEEeeCChhhHHHHHHHHhcCCCceEEEEeC
Q 017916          311 Y----------KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  364 (364)
Q Consensus       311 ~----------~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  364 (364)
                      .          .+.++++++++++|++  ++.++++|+|  +++++|++.+. +...||+|+++
T Consensus       291 ~~~~~~~~~~~~~~~~~~~~l~~~g~l--~~~i~~~~~l--~~~~~A~~~~~-~~~~gKvvl~p  349 (349)
T 3pi7_A          291 SEWMRQFKERRGPAILEAQKRFSDGRW--STDVTAVVPL--AEAIAWVPAEL-TKPNGKVFIRP  349 (349)
T ss_dssp             HHHHHHTHHHHHHHHHHC-CTTTTSSC--CC-CCEEEEH--HHHHHHHHHHH-TSSSSCEEEEC
T ss_pred             hhhhhhCcHHHHHHHHHHHHHHHcCCc--ccccceEEcH--HHHHHHHHHHh-CCCCceEEEeC
Confidence            3          3567888899999998  7788899999  99999999544 45779999975

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}

Probab=100.00  E-value=3.9e-48  Score=356.63  Aligned_cols=309  Identities=19%  Similarity=0.224  Sum_probs=257.0

Q ss_pred             hcceeEEEecCC----ceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCCC
Q 017916           16 EVNMAAWLLGVN----TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSE   91 (364)
Q Consensus        16 ~~~~~~~~~~~~----~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~   91 (364)
                      .+|+++++....    .+++.+.|.|+++++||+|||++++||++|+..+.|.+..  ...+|.++|||++|+|+++|++
T Consensus         3 ~~mka~~~~~~g~p~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~--~~~~p~i~G~E~~G~V~~vG~~   80 (340)
T 3gms_A            3 LHGKLIQFHKFGNPKDVLQVEYKNIEPLKDNEVFVRMLVRPINPSDLIPITGAYAH--RIPLPNIPGYEGVGIVENVGAF   80 (340)
T ss_dssp             CEEEEEEESSCSCHHHHEEEEEEECCCCCTTEEEEEEEEEECCHHHHGGGGTTTTT--TSCSSBCCCSCCEEEEEEECTT
T ss_pred             cccEEEEEecCCCchheEEEEecCCCCCCCCEEEEEEEEecCCHHHHHHhcCCCCC--CCCCCCcCCcceEEEEEEeCCC
Confidence            468899888543    3999999999999999999999999999999999886532  2478999999999999999999


Q ss_pred             CCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCccchhhhh-hhHHH
Q 017916           92 VKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVG  170 (364)
Q Consensus        92 v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~lP~~~~~~~aa~~~-~~~~a  170 (364)
                      |++|++||+|+++                            ..+|+|+||+++++++++++|+++++++||+++ .+.+|
T Consensus        81 v~~~~vGdrV~~~----------------------------~~~G~~aey~~v~~~~~~~vP~~l~~~~aa~l~~~~~ta  132 (340)
T 3gms_A           81 VSRELIGKRVLPL----------------------------RGEGTWQEYVKTSADFVVPIPDSIDDFTAAQMYINPLTA  132 (340)
T ss_dssp             SCGGGTTCEEEEC----------------------------SSSCSSBSEEEEEGGGEEECCTTSCHHHHTTSSHHHHHH
T ss_pred             CCCCCCCCEEEec----------------------------CCCccceeEEEcCHHHeEECCCCCCHHHHhhhcchHHHH
Confidence            9999999999864                            246999999999999999999999999999764 77889


Q ss_pred             HHHH-HHcCCCCCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHH
Q 017916          171 LHAC-RRANIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQ  248 (364)
Q Consensus       171 ~~~l-~~~~~~~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~  248 (364)
                      |+++ +.+++++|++|||+|+ |++|++++|+|+.+|+ .|++++.++++.++++++|++.++++..  .++.+.+++++
T Consensus       133 ~~~~~~~~~~~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~lga~~~~~~~~--~~~~~~~~~~~  209 (340)
T 3gms_A          133 WVTCTETLNLQRNDVLLVNACGSAIGHLFAQLSQILNF-RLIAVTRNNKHTEELLRLGAAYVIDTST--APLYETVMELT  209 (340)
T ss_dssp             HHHHHTTSCCCTTCEEEESSTTSHHHHHHHHHHHHHTC-EEEEEESSSTTHHHHHHHTCSEEEETTT--SCHHHHHHHHT
T ss_pred             HHHHHHhcccCCCCEEEEeCCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhCCCcEEEeCCc--ccHHHHHHHHh
Confidence            9888 6699999999999998 6999999999999999 7888889999999999999999888643  67777777664


Q ss_pred             HHcCCCccEEEECCCCHHHHHHHHHhcccCCEEEEEcCCCCCccccchhhh-hcCcEEEeecc-----------CCCcHH
Q 017916          249 KAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAA-VREVDVVGVFR-----------YKNTWP  316 (364)
Q Consensus       249 ~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~-~~~~~~~~~~~-----------~~~~~~  316 (364)
                        .+.++|++|||+|+ ......+++|+++|+++.+|..... ..+...+. ...+.+.....           ..+.++
T Consensus       210 --~~~g~Dvvid~~g~-~~~~~~~~~l~~~G~iv~~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  285 (340)
T 3gms_A          210 --NGIGADAAIDSIGG-PDGNELAFSLRPNGHFLTIGLLSGI-QVNWAEIVTKAKVHANIFHLRHWNDEVSPYKWQETFR  285 (340)
T ss_dssp             --TTSCEEEEEESSCH-HHHHHHHHTEEEEEEEEECCCTTSC-CCCHHHHHHTSCCEEEECCHHHHHHHSCHHHHHHHHH
T ss_pred             --CCCCCcEEEECCCC-hhHHHHHHHhcCCCEEEEEeecCCC-CCCHHHhhhcccceEEEEEehhhhhhcCHHHHHHHHH
Confidence              35689999999995 5556677999999999999864332 22222222 23455444321           145788


Q ss_pred             HHHHHHHcCCCCCCCceEEEeeCChhhHHHHHHHHhcCC-CceEEEEeC
Q 017916          317 LCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGG-TAIKVMFNL  364 (364)
Q Consensus       317 ~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~-~~gkvvv~~  364 (364)
                      ++++++++|++.+.+ +.+.|+|  +++++||+.++++. ..||+++++
T Consensus       286 ~~~~l~~~g~l~~~~-i~~~~~l--~~~~~A~~~~~~~~~~~GKvvl~~  331 (340)
T 3gms_A          286 HLIRLVENEQLRFMK-VHSTYEL--ADVKAAVDVVQSAEKTKGKVFLTS  331 (340)
T ss_dssp             HHHHHHHTTSSCCCC-EEEEEEG--GGHHHHHHHHHCTTCCSSEEEEEC
T ss_pred             HHHHHHHcCCCcccc-ccEEEeH--HHHHHHHHHHHhcCCCCCeEEEEE
Confidence            999999999996544 7899999  99999999999997 459999974

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*

Probab=100.00  E-value=3.2e-48  Score=355.00  Aligned_cols=307  Identities=27%  Similarity=0.270  Sum_probs=260.7

Q ss_pred             ceeEEEec---CCceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCCCCCC
Q 017916           18 NMAAWLLG---VNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT   94 (364)
Q Consensus        18 ~~~~~~~~---~~~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~   94 (364)
                      |+++++..   ++.+++.+.|.|+++++||+|||+++++|++|++.+.|.+..   ..+|.++|||++|+|+++|+++++
T Consensus         2 MkA~~~~~~g~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~---~~~p~v~G~e~~G~V~~vG~~v~~   78 (325)
T 3jyn_A            2 AKRIQFSTVGGPEVLEYVDFEPEAPGPQAVVVRNKAIGLNFIDTYYRSGLYPA---PFLPSGLGAEGAGVVEAVGDEVTR   78 (325)
T ss_dssp             EEEEEBSSCSSGGGCEEEEECCCCCCTTEEEEEEEEEECCHHHHHHHHTSSCC---SSSSBCCCCCEEEEEEEECTTCCS
T ss_pred             cEEEEEecCCCcceeEEeecCCCCCCCCEEEEEEEEEecCHHHHHHHCCCCCC---CCCCCCCCceeEEEEEEECCCCCC
Confidence            67777773   467999999999999999999999999999999999886532   467999999999999999999999


Q ss_pred             CCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCccchhhhh-hhHHHHHH
Q 017916           95 LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHA  173 (364)
Q Consensus        95 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~lP~~~~~~~aa~~~-~~~~a~~~  173 (364)
                      |++||+|+...                           ..+|+|+||+.+++++++++|+++++++|++++ .+.++|++
T Consensus        79 ~~~GdrV~~~~---------------------------~~~G~~aey~~v~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~  131 (325)
T 3jyn_A           79 FKVGDRVAYGT---------------------------GPLGAYSEVHVLPEANLVKLADSVSFEQAAALMLKGLTVQYL  131 (325)
T ss_dssp             CCTTCEEEESS---------------------------SSSCCSBSEEEEEGGGEEECCTTSCHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEec---------------------------CCCccccceEEecHHHeEECCCCCCHHHHhhhhhhHHHHHHH
Confidence            99999998642                           246999999999999999999999999998665 78889999


Q ss_pred             HH-HcCCCCCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHc
Q 017916          174 CR-RANIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAM  251 (364)
Q Consensus       174 l~-~~~~~~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~  251 (364)
                      +. .+++++|++|||+|+ |++|++++|+|+.+|+ .|++++.++++.++++++|++.++++..  +++.+.+++.+  .
T Consensus       132 l~~~~~~~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~--~~~~~~~~~~~--~  206 (325)
T 3jyn_A          132 LRQTYQVKPGEIILFHAAAGGVGSLACQWAKALGA-KLIGTVSSPEKAAHAKALGAWETIDYSH--EDVAKRVLELT--D  206 (325)
T ss_dssp             HHTTSCCCTTCEEEESSTTSHHHHHHHHHHHHHTC-EEEEEESSHHHHHHHHHHTCSEEEETTT--SCHHHHHHHHT--T
T ss_pred             HHHhcCCCCCCEEEEEcCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCCEEEeCCC--ccHHHHHHHHh--C
Confidence            85 589999999999996 9999999999999999 6888889999999999999999888643  67777777664  3


Q ss_pred             CCCccEEEECCCCHHHHHHHHHhcccCCEEEEEcCCCCCc-cccchhhhhc-CcEEEeecc-----CCC----cHHHHHH
Q 017916          252 GTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEM-TVPLTPAAVR-EVDVVGVFR-----YKN----TWPLCLE  320 (364)
Q Consensus       252 ~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~-~~~~~~~~~~-~~~~~~~~~-----~~~----~~~~~~~  320 (364)
                      +.++|++|||+|+ +.+..++++|+++|+++.+|...... .++...+..+ .+.+.+...     ...    .++++++
T Consensus       207 ~~g~Dvvid~~g~-~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  285 (325)
T 3jyn_A          207 GKKCPVVYDGVGQ-DTWLTSLDSVAPRGLVVSFGNASGPVSGVNLGILAQKDSVYVTRPTLGSYANNAQNLQTMADELFD  285 (325)
T ss_dssp             TCCEEEEEESSCG-GGHHHHHTTEEEEEEEEECCCTTCCCCSCCTHHHHHTTSCEEECCCHHHHSCSTTHHHHHHHHHHH
T ss_pred             CCCceEEEECCCh-HHHHHHHHHhcCCCEEEEEecCCCCCCCCCHHHHhhcCcEEEEeeeeeeecCCHHHHHHHHHHHHH
Confidence            5689999999995 78899999999999999998654432 4555566666 566654321     122    3458999


Q ss_pred             HHHcCCCCCCCceEEEeeCChhhHHHHHHHHhcCCCceEEEEeC
Q 017916          321 LLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  364 (364)
Q Consensus       321 ~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  364 (364)
                      ++++|++  ++.+.++|++  +++++|++.++++...||+|++.
T Consensus       286 l~~~g~l--~~~i~~~~~l--~~~~~A~~~~~~~~~~Gkvvl~p  325 (325)
T 3jyn_A          286 MLASGKL--KVDGIEQYAL--KDAAKAQIELSARRTTGSTILIP  325 (325)
T ss_dssp             HHHTTSS--CCCCCEEEEG--GGHHHHHHHHHTTCCCSCEEEEC
T ss_pred             HHHCCCe--eCccccEEcH--HHHHHHHHHHHcCCCCceEEEeC
Confidence            9999999  4557899999  99999999999999999999874

>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}

Probab=100.00  E-value=1.5e-49  Score=362.28  Aligned_cols=298  Identities=23%  Similarity=0.327  Sum_probs=241.1

Q ss_pred             hcceeEEEe-cCCceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCCCCCC
Q 017916           16 EVNMAAWLL-GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT   94 (364)
Q Consensus        16 ~~~~~~~~~-~~~~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~   94 (364)
                      .+|+++++. +++.+++.+.|.|+++++||+|||+++++|++|++.+.|.+..   ..+|.++|||++|+|+++|+++++
T Consensus         3 ~tMka~~~~~~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~---~~~p~i~G~e~~G~V~~vG~~v~~   79 (315)
T 3goh_A            3 EQHQVWAYQTKTHSVTLNSVDIPALAADDILVQNQAIGINPVDWKFIKANPIN---WSNGHVPGVDGAGVIVKVGAKVDS   79 (315)
T ss_dssp             CEEEEEEEETTTTEEEEEEEECCCCCTTEEEEEEEEEEECHHHHHHHHHCTTC---CCTTCCCCSEEEEEEEEECTTSCG
T ss_pred             cceEEEEEeCCCCeeEEEecCCCCCCCCEEEEEEEEEecCHHHHHHHcCCCCc---CCCCCEeeeeeEEEEEEeCCCCCC
Confidence            458999998 7899999999999999999999999999999999999886532   468999999999999999999999


Q ss_pred             CCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCccchhhh-hhhHHHHHH
Q 017916           95 LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMC-EPLSVGLHA  173 (364)
Q Consensus        95 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~lP~~~~~~~aa~~-~~~~~a~~~  173 (364)
                      |++||||++.+.                         ...+|+|+||+++++++++++|+++++++||++ .+++|||++
T Consensus        80 ~~vGdrV~~~~~-------------------------~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~a  134 (315)
T 3goh_A           80 KMLGRRVAYHTS-------------------------LKRHGSFAEFTVLNTDRVMTLPDNLSFERAAALPCPLLTAWQA  134 (315)
T ss_dssp             GGTTCEEEEECC-------------------------TTSCCSSBSEEEEETTSEEECCTTSCHHHHHTSHHHHHHHHHH
T ss_pred             CCCCCEEEEeCC-------------------------CCCCcccccEEEEcHHHhccCcCCCCHHHHhhCccHHHHHHHH
Confidence            999999998632                         135699999999999999999999999999855 499999999


Q ss_pred             HHHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcCC
Q 017916          174 CRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGT  253 (364)
Q Consensus       174 l~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~  253 (364)
                      ++.+++++|++|||+|+|++|++++|+|+.+|+ .|++++ +++|.++++++|++++++  +     .+.+       +.
T Consensus       135 l~~~~~~~g~~VlV~GaG~vG~~a~qlak~~Ga-~Vi~~~-~~~~~~~~~~lGa~~v~~--d-----~~~v-------~~  198 (315)
T 3goh_A          135 FEKIPLTKQREVLIVGFGAVNNLLTQMLNNAGY-VVDLVS-ASLSQALAAKRGVRHLYR--E-----PSQV-------TQ  198 (315)
T ss_dssp             HTTSCCCSCCEEEEECCSHHHHHHHHHHHHHTC-EEEEEC-SSCCHHHHHHHTEEEEES--S-----GGGC-------CS
T ss_pred             HhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-EEEEEE-ChhhHHHHHHcCCCEEEc--C-----HHHh-------CC
Confidence            977999999999999999999999999999999 788888 899999999999988773  1     1111       67


Q ss_pred             CccEEEECCCCHHHHHHHHHhcccCCEEEEEcCCCCCcccc--chhhhhcCcEEEeeccC---------CCcHHHHHHHH
Q 017916          254 GIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVP--LTPAAVREVDVVGVFRY---------KNTWPLCLELL  322 (364)
Q Consensus       254 ~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~--~~~~~~~~~~~~~~~~~---------~~~~~~~~~~l  322 (364)
                      ++|++|||+|+ +....++++|+++|+++.++.........  ...+..+++++.+.+..         .+.++++++++
T Consensus       199 g~Dvv~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  277 (315)
T 3goh_A          199 KYFAIFDAVNS-QNAAALVPSLKANGHIICIQDRIPAPIDPAFTRTISYHEIALGALHDFGDRQDWQILMQQGEALLTLI  277 (315)
T ss_dssp             CEEEEECC--------TTGGGEEEEEEEEEECCC----------CCSEEEEECGGGHHHHCCHHHHHHHHHHHHHHHHHH
T ss_pred             CccEEEECCCc-hhHHHHHHHhcCCCEEEEEeCCCCccccchhhhcceeeEEEeecccccCChhHHHHHHHHHHHHHHHH
Confidence            89999999995 45588999999999999997433211111  11122233333232221         12468899999


Q ss_pred             HcCCCCCCCceEEEeeCChhhHHHHHHHHhcCCCceEEEEeC
Q 017916          323 RSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  364 (364)
Q Consensus       323 ~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  364 (364)
                      ++|++  ++.++++|+|  +++++|++.++  ...||+|+++
T Consensus       278 ~~g~l--~~~i~~~~~l--~~~~~A~~~~~--~~~gKvvi~~  313 (315)
T 3goh_A          278 AQGKM--EIAAPDIFRF--EQMIEALDHSE--QTKLKTVLTL  313 (315)
T ss_dssp             HTTSS--CCCCCEEEEG--GGHHHHHHHHH--HHCCCEEEES
T ss_pred             HCCCc--ccccceEecH--HHHHHHHHHHH--hcCCcEEEEe
Confidence            99998  6788899999  99999999998  6788999975

>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens}

Probab=100.00  E-value=2.8e-48  Score=358.75  Aligned_cols=305  Identities=23%  Similarity=0.310  Sum_probs=254.3

Q ss_pred             cceeEEEecC---CceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCCCCC
Q 017916           17 VNMAAWLLGV---NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVK   93 (364)
Q Consensus        17 ~~~~~~~~~~---~~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~   93 (364)
                      +|+++++.++   +.+++.+.|.|+++++||+|||+++++|++|++.+.|.+..  ...+|.++|||++|+|+++|++++
T Consensus         3 ~mka~~~~~~g~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~--~~~~p~v~G~e~~G~V~~vG~~v~   80 (349)
T 4a27_A            3 EMRAVVLAGFGGLNKLRLFRKAMPEPQDGELKIRVKACGLNFIDLMVRQGNIDN--PPKTPLVPGFECSGIVEALGDSVK   80 (349)
T ss_dssp             CEEEEEECSSSSGGGEEEEEECCCCCCTTEEEEEEEEEEECHHHHHHHHTCSSS--CCCSSBCCCSEEEEEEEEECTTCC
T ss_pred             eeEEEEEccCCCcceeEEEecCCCCCCCCEEEEEEEEEecCHHHHHHhCCCcCC--CCCCCccccceeEEEEEEeCCCCC
Confidence            5889998865   37999999999999999999999999999999999886432  257799999999999999999999


Q ss_pred             CCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCccchhhhh-hhHHHHH
Q 017916           94 TLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLH  172 (364)
Q Consensus        94 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~lP~~~~~~~aa~~~-~~~~a~~  172 (364)
                      +|++||+|+++.                            .+|+|+||+.+++++++++|+++++++|++++ ++.|||+
T Consensus        81 ~~~~GdrV~~~~----------------------------~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~  132 (349)
T 4a27_A           81 GYEIGDRVMAFV----------------------------NYNAWAEVVCTPVEFVYKIPDDMSFSEAAAFPMNFVTAYV  132 (349)
T ss_dssp             SCCTTCEEEEEC----------------------------SSCCSBSEEEEEGGGEEECCTTSCHHHHHTSHHHHHHHHH
T ss_pred             CCCCCCEEEEec----------------------------CCCcceEEEEecHHHeEECCCCCCHHHHHHHHHHHHHHHH
Confidence            999999999752                            45999999999999999999999999999776 8899999


Q ss_pred             HH-HHcCCCCCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHH
Q 017916          173 AC-RRANIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKA  250 (364)
Q Consensus       173 ~l-~~~~~~~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~  250 (364)
                      ++ +.+++++|++|||+|+ |++|++++|+|+.+|...|++++ ++++.+.++ +|++++++   ...++.+.++++.  
T Consensus       133 ~l~~~~~~~~g~~VlV~Ga~G~vG~~a~qla~~~g~~~V~~~~-~~~~~~~~~-~ga~~~~~---~~~~~~~~~~~~~--  205 (349)
T 4a27_A          133 MLFEVANLREGMSVLVHSAGGGVGQAVAQLCSTVPNVTVFGTA-STFKHEAIK-DSVTHLFD---RNADYVQEVKRIS--  205 (349)
T ss_dssp             HHHTTSCCCTTCEEEESSTTSHHHHHHHHHHTTSTTCEEEEEE-CGGGHHHHG-GGSSEEEE---TTSCHHHHHHHHC--
T ss_pred             HHHHhcCCCCCCEEEEEcCCcHHHHHHHHHHHHcCCcEEEEeC-CHHHHHHHH-cCCcEEEc---CCccHHHHHHHhc--
Confidence            98 5689999999999998 99999999999999765777776 677888888 99999887   2367877777653  


Q ss_pred             cCCCccEEEECCCCHHHHHHHHHhcccCCEEEEEcCCCCC-----------------ccccchhhhhcCcEEEeeccC--
Q 017916          251 MGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHE-----------------MTVPLTPAAVREVDVVGVFRY--  311 (364)
Q Consensus       251 ~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~--  311 (364)
                       ++++|++|||+|+ +.+..++++|+++|+++.+|.....                 ...+...++.++.++.+....  
T Consensus       206 -~~g~Dvv~d~~g~-~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~g~~~~~~  283 (349)
T 4a27_A          206 -AEGVDIVLDCLCG-DNTGKGLSLLKPLGTYILYGSSNMVTGETKSFFSFAKSWWQVEKVNPIKLYEENKVIAGFSLLNL  283 (349)
T ss_dssp             -TTCEEEEEEECC--------CTTEEEEEEEEEEC-------------------------CHHHHHHHTCEEEEECHHHH
T ss_pred             -CCCceEEEECCCc-hhHHHHHHHhhcCCEEEEECCCcccccccccccccccccccccccCHHHHhhcCceEEEEeehhe
Confidence             6789999999995 4558999999999999999853211                 113344567788888887542  


Q ss_pred             ----------CCcHHHHHHHHHcCCCCCCCceEEEeeCChhhHHHHHHHHhcCCCceEEEEeC
Q 017916          312 ----------KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  364 (364)
Q Consensus       312 ----------~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  364 (364)
                                .+.++++++++++|++  ++.+.++|+|  +++++|++.++++...||+|+++
T Consensus       284 ~~~~~~~~~~~~~~~~~~~l~~~g~l--~~~i~~~~~l--~~~~~A~~~l~~~~~~GKvvi~~  342 (349)
T 4a27_A          284 LFKQGRAGLIRGVVEKLIGLYNQKKI--KPVVDSLWAL--EEVKEAMQRIHDRGNIGKLILDV  342 (349)
T ss_dssp             HHTSCCHHHHHHHHHHHHHHHHTTSC--CCCEEEEECG--GGHHHHHHHHHTTCCSSEEEEET
T ss_pred             eccccchHHHHHHHHHHHHHHHCCCc--cccccceECH--HHHHHHHHHHHhCCCCceEEEec
Confidence                      4568899999999998  7888999999  99999999999999999999975

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*

Probab=100.00  E-value=1.1e-47  Score=355.23  Aligned_cols=316  Identities=18%  Similarity=0.237  Sum_probs=260.8

Q ss_pred             cccchhcceeEEEecC---CceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEE
Q 017916           11 KEDGEEVNMAAWLLGV---NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEK   87 (364)
Q Consensus        11 ~~~~~~~~~~~~~~~~---~~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~   87 (364)
                      +..++++|+++++.++   +.+++.+.|.|+++++||+|||.+++||++|+..+.|.+..  ...+|.++|+|++|+|++
T Consensus        16 ~~~~~~~Mka~~~~~~g~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~--~~~~p~v~G~E~~G~V~~   93 (354)
T 2j8z_A           16 ENLYFQSMLAVHFDKPGGPENLYVKEVAKPSPGEGEVLLKVAASALNRADLMQRQGQYDP--PPGASNILGLEASGHVAE   93 (354)
T ss_dssp             -----CEEEEEEESSCSSGGGEEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHHTSSCC--CTTSCSSSCSEEEEEEEE
T ss_pred             cccchhheeEEEEccCCCccceEEeecCCCCCCCCeEEEEEEEeecCHHHHHHhCCCCCC--CCCCCcccceeeEEEEEE
Confidence            4456667899988854   36999999999999999999999999999999998875432  235789999999999999


Q ss_pred             eCCCC-CCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCccchhhhh-
Q 017916           88 VGSEV-KTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-  165 (364)
Q Consensus        88 vG~~v-~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~lP~~~~~~~aa~~~-  165 (364)
                      +|++| ++|++||+|+++                            ...|+|+||+++++++++++|+++++++||+++ 
T Consensus        94 vG~~v~~~~~vGdrV~~~----------------------------~~~G~~aey~~v~~~~~~~iP~~ls~~~aa~l~~  145 (354)
T 2j8z_A           94 LGPGCQGHWKIGDTAMAL----------------------------LPGGGQAQYVTVPEGLLMPIPEGLTLTQAAAIPE  145 (354)
T ss_dssp             ECSCC--CCCTTCEEEEE----------------------------CSSCCSBSEEEEEGGGEEECCTTCCHHHHTTSHH
T ss_pred             ECCCcCCCCCCCCEEEEe----------------------------cCCCcceeEEEeCHHHcEECCCCCCHHHHHhccc
Confidence            99999 999999999875                            235999999999999999999999999988665 


Q ss_pred             hhHHHHHHH-HHcCCCCCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHH
Q 017916          166 PLSVGLHAC-RRANIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEE  243 (364)
Q Consensus       166 ~~~~a~~~l-~~~~~~~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~  243 (364)
                      +++|||+++ +.+++++|++|||+|+ |++|++++|+|+..|+ .|++++.++++.+.++++|++.++++..  +++.+.
T Consensus       146 ~~~tA~~al~~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~~  222 (354)
T 2j8z_A          146 AWLTAFQLLHLVGNVQAGDYVLIHAGLSGVGTAAIQLTRMAGA-IPLVTAGSQKKLQMAEKLGAAAGFNYKK--EDFSEA  222 (354)
T ss_dssp             HHHHHHHHHTTTSCCCTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTCSEEEETTT--SCHHHH
T ss_pred             hHHHHHHHHHHhcCCCCCCEEEEECCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCcEEEecCC--hHHHHH
Confidence            899999999 6789999999999996 9999999999999999 6888888999999999999998887653  567666


Q ss_pred             HHHHHHHcCCCccEEEECCCCHHHHHHHHHhcccCCEEEEEcCCCC-Cccccc-hhhhhcCcEEEeeccCCC--------
Q 017916          244 VEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHH-EMTVPL-TPAAVREVDVVGVFRYKN--------  313 (364)
Q Consensus       244 i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~--------  313 (364)
                      +++..  .+.++|++|||+|+ ..+..++++|+++|+++.+|.... ...++. ..+..+++++.+......        
T Consensus       223 ~~~~~--~~~~~d~vi~~~G~-~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~  299 (354)
T 2j8z_A          223 TLKFT--KGAGVNLILDCIGG-SYWEKNVNCLALDGRWVLYGLMGGGDINGPLFSKLLFKRGSLITSLLRSRDNKYKQML  299 (354)
T ss_dssp             HHHHT--TTSCEEEEEESSCG-GGHHHHHHHEEEEEEEEECCCTTCSCCCSCHHHHHHHTTCEEEECCSTTCCHHHHHHH
T ss_pred             HHHHh--cCCCceEEEECCCc-hHHHHHHHhccCCCEEEEEeccCCCccCCChhHHHHhCCCEEEEEEcccccccccHHH
Confidence            66553  24589999999996 478899999999999999986443 234455 567789999999765321        


Q ss_pred             ---cHHHHHHHHHcC-CCCCCCceEEEeeCChhhHHHHHHHHhcCCCceEEEEeC
Q 017916          314 ---TWPLCLELLRSG-KIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  364 (364)
Q Consensus       314 ---~~~~~~~~l~~g-~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  364 (364)
                         .++++++++++| ++.+++.+.++|+|  +++++|++.++++...||+|+++
T Consensus       300 ~~~~~~~~~~l~~~g~~~~l~~~i~~~~~l--~~~~~A~~~~~~~~~~gKvvv~~  352 (354)
T 2j8z_A          300 VNAFTEQILPHFSTEGPQRLLPVLDRIYPV--TEIQEAHKYMEANKNIGKIVLEL  352 (354)
T ss_dssp             HHHHHHHTGGGGTC---CCCCCCEEEEEEG--GGHHHHHHHHHTTCCSSEEEEEC
T ss_pred             HHHHHHHHHHHHHcCCCccccCccceEEcH--HHHHHHHHHHHhCCCCceEEEec
Confidence               124578888999 33337889999999  99999999999988899999975

>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A

Probab=100.00  E-value=4e-48  Score=358.75  Aligned_cols=314  Identities=18%  Similarity=0.239  Sum_probs=255.6

Q ss_pred             ccchhcceeEEEecCCc----eEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEE
Q 017916           12 EDGEEVNMAAWLLGVNT----LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEK   87 (364)
Q Consensus        12 ~~~~~~~~~~~~~~~~~----~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~   87 (364)
                      ++|+.+|+++++.++..    +++.+.|.|+++++||+|||++++||++|++.+.|.+..  ...+|.++|+|++|+|++
T Consensus        21 ~~m~~~mka~~~~~~g~~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~--~~~~P~v~G~E~~G~V~~   98 (357)
T 1zsy_A           21 QSMPARVRALVYGHHGDPAKVVELKNLELAAVRGSDVRVKMLAAPINPSDINMIQGNYGL--LPELPAVGGNEGVAQVVA   98 (357)
T ss_dssp             CCCCCCEEEEEESSSSCHHHHEEEEEECCCCCCTTEEEEEEEEEECCHHHHHHHHTCSSC--CCCSSEECCSCCEEEEEE
T ss_pred             hhCchhhEEEEEecCCCccceEEEeeccCCCCCCCEEEEEEEECCCCHHHhhHhcCCCCC--CCCCCccccceEEEEEEE
Confidence            45667789999887654    899999999999999999999999999999999875432  235799999999999999


Q ss_pred             eCCCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCccchhhhh-h
Q 017916           88 VGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-P  166 (364)
Q Consensus        88 vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~lP~~~~~~~aa~~~-~  166 (364)
                      +|++|++|++||+|++.+.                           .+|+|+||+++++++++++|+++++++||+++ .
T Consensus        99 vG~~v~~~~vGdrV~~~~~---------------------------~~G~~aey~~v~~~~~~~iP~~l~~~~Aa~l~~~  151 (357)
T 1zsy_A           99 VGSNVTGLKPGDWVIPANA---------------------------GLGTWRTEAVFSEEALIQVPSDIPLQSAATLGVN  151 (357)
T ss_dssp             ECTTCCSCCTTCEEEESSS---------------------------CSCCSBSEEEEEGGGEEEECSSSCHHHHHHTTSH
T ss_pred             eCCCCCCCCCCCEEEEcCC---------------------------CCccceeEEecCHHHcEECCCCCCHHHHhhhccc
Confidence            9999999999999987521                           25999999999999999999999999999876 7


Q ss_pred             hHHHHHHHH-HcCCCCCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecCh---hHHHHHHHcCCCeEEecCCCcccHH
Q 017916          167 LSVGLHACR-RANIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDD---YRLSVAKELGADNIVKVSTNLQDIA  241 (364)
Q Consensus       167 ~~~a~~~l~-~~~~~~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~---~~~~~~~~lg~~~~~~~~~~~~~~~  241 (364)
                      +.|||+++. .+++++|++|||+|+ |++|++++|+|+.+|++++++++.++   ++.++++++|+++++++++.   ..
T Consensus       152 ~~ta~~~l~~~~~~~~g~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~~lGa~~vi~~~~~---~~  228 (357)
T 1zsy_A          152 PCTAYRMLMDFEQLQPGDSVIQNASNSGVGQAVIQIAAALGLRTINVVRDRPDIQKLSDRLKSLGAEHVITEEEL---RR  228 (357)
T ss_dssp             HHHHHHHHHHSSCCCTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEECCCSCHHHHHHHHHHTTCSEEEEHHHH---HS
T ss_pred             HHHHHHHHHHHhccCCCCEEEEeCCcCHHHHHHHHHHHHcCCEEEEEecCccchHHHHHHHHhcCCcEEEecCcc---hH
Confidence            889999995 489999999999998 99999999999999996555554433   35788999999998875321   11


Q ss_pred             HHHHHHHHHcC-CCccEEEECCCCHHHHHHHHHhcccCCEEEEEcCC-CCCccccchhhhhcCcEEEeeccC--------
Q 017916          242 EEVEKIQKAMG-TGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMG-HHEMTVPLTPAAVREVDVVGVFRY--------  311 (364)
Q Consensus       242 ~~i~~~~~~~~-~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~--------  311 (364)
                      +.++++.  .+ .++|++|||+|+ .....++++|+++|+++.+|.. ..+..++...+..+++++.+.+..        
T Consensus       229 ~~~~~~~--~~~~~~Dvvid~~g~-~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~  305 (357)
T 1zsy_A          229 PEMKNFF--KDMPQPRLALNCVGG-KSSTELLRQLARGGTMVTYGGMAKQPVVASVSLLIFKDLKLRGFWLSQWKKDHSP  305 (357)
T ss_dssp             GGGGGTT--SSSCCCSEEEESSCH-HHHHHHHTTSCTTCEEEECCCCTTCCBCCCHHHHHHSCCEEEECCHHHHHHHSCH
T ss_pred             HHHHHHH--hCCCCceEEEECCCc-HHHHHHHHhhCCCCEEEEEecCCCCCCCCCHHHHHhcCceEEEEEcchhcccCCH
Confidence            1222221  12 259999999995 4556799999999999999743 233445555677899999997542        


Q ss_pred             ---CCcHHHHHHHHHcCCCCCCCceEEEeeCChhhHHHHHHHHhcCCCceEEEEeC
Q 017916          312 ---KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  364 (364)
Q Consensus       312 ---~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  364 (364)
                         .+.++++++++++|++  ++.+.++|+|  +++++|++.++++...||+|+++
T Consensus       306 ~~~~~~~~~~~~l~~~g~l--~~~~~~~~~l--~~~~~A~~~~~~~~~~gKvvl~~  357 (357)
T 1zsy_A          306 DQFKELILTLCDLIRRGQL--TAPACSQVPL--QDYQSALEASMKPFISSKQILTM  357 (357)
T ss_dssp             HHHHHHHHHHHHHHHTTSS--CCCCEEEEEG--GGHHHHHHHHTSSSCSSEEEEEC
T ss_pred             HHHHHHHHHHHHHHHcCCC--cCccceEEcH--HHHHHHHHHHHhCCCCCcEEEeC
Confidence               2357889999999998  4556689999  99999999999988889999975

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=6e-47  Score=349.67  Aligned_cols=309  Identities=23%  Similarity=0.354  Sum_probs=260.3

Q ss_pred             hcceeEEEec---CCceEE-EEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCCC
Q 017916           16 EVNMAAWLLG---VNTLKI-QPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSE   91 (364)
Q Consensus        16 ~~~~~~~~~~---~~~~~~-~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~   91 (364)
                      .+|+++++..   ++.+++ .+.|.|+++++||+|||.+++||++|+..+.|.+..  ...+|.++|+|++|+|+++|++
T Consensus        28 ~~Mka~~~~~~g~~~~l~~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~--~~~~P~v~G~E~~G~V~~vG~~  105 (351)
T 1yb5_A           28 KLMRAVRVFEFGGPEVLKLRSDIAVPIPKDHQVLIKVHACGVNPVETYIRSGTYSR--KPLLPYTPGSDVAGVIEAVGDN  105 (351)
T ss_dssp             CEEEEEEESSCSSGGGEEEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHHTCSSC--CCCSSBCCCSCEEEEEEEECTT
T ss_pred             ceEEEEEEccCCCcceeEEeeecCCCCCCCCEEEEEEEEEecCHHHHHHhCCCCCC--CCCCCCcCCceeEEEEEEECCC
Confidence            4578888774   457999 899999999999999999999999999988875421  2457999999999999999999


Q ss_pred             CCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCccchhhhh-hhHHH
Q 017916           92 VKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVG  170 (364)
Q Consensus        92 v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~lP~~~~~~~aa~~~-~~~~a  170 (364)
                      +++|++||+|++.+                           ...|+|+||+++++++++++|+++++++||+++ +++||
T Consensus       106 v~~~~vGdrV~~~~---------------------------~~~G~~aey~~v~~~~~~~~P~~l~~~~aA~l~~~~~ta  158 (351)
T 1yb5_A          106 ASAFKKGDRVFTSS---------------------------TISGGYAEYALAADHTVYKLPEKLDFKQGAAIGIPYFTA  158 (351)
T ss_dssp             CTTCCTTCEEEESC---------------------------CSSCSSBSEEEEEGGGEEECCTTSCHHHHTTTHHHHHHH
T ss_pred             CCCCCCCCEEEEeC---------------------------CCCCcceeEEEECHHHeEECCCCCCHHHHHhhhhHHHHH
Confidence            99999999998752                           135999999999999999999999999988775 89999


Q ss_pred             HHHHH-HcCCCCCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHH
Q 017916          171 LHACR-RANIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQ  248 (364)
Q Consensus       171 ~~~l~-~~~~~~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~  248 (364)
                      |+++. .+++++|++|||+|+ |++|++++|+|+..|+ .|+++++++++.++++++|++.++++..  +++.+.+++..
T Consensus       159 ~~al~~~~~~~~g~~vlV~GasggiG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~~ga~~~~d~~~--~~~~~~~~~~~  235 (351)
T 1yb5_A          159 YRALIHSACVKAGESVLVHGASGGVGLAACQIARAYGL-KILGTAGTEEGQKIVLQNGAHEVFNHRE--VNYIDKIKKYV  235 (351)
T ss_dssp             HHHHHTTSCCCTTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHTTCSEEEETTS--TTHHHHHHHHH
T ss_pred             HHHHHHhhCCCCcCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHcCCCEEEeCCC--chHHHHHHHHc
Confidence            99995 689999999999998 9999999999999999 6888888999999999999998887653  56666666554


Q ss_pred             HHcCCCccEEEECCCCHHHHHHHHHhcccCCEEEEEcCCCCCccccchhhhhcCcEEEeeccC-------CCcHHHHHHH
Q 017916          249 KAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY-------KNTWPLCLEL  321 (364)
Q Consensus       249 ~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~  321 (364)
                        .+.++|++|||+| ...+..++++|+++|+++.+|.. ....++...++.+++++.+....       .+.++.+.++
T Consensus       236 --~~~~~D~vi~~~G-~~~~~~~~~~l~~~G~iv~~g~~-~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~l~~~  311 (351)
T 1yb5_A          236 --GEKGIDIIIEMLA-NVNLSKDLSLLSHGGRVIVVGSR-GTIEINPRDTMAKESSIIGVTLFSSTKEEFQQYAAALQAG  311 (351)
T ss_dssp             --CTTCEEEEEESCH-HHHHHHHHHHEEEEEEEEECCCC-SCEEECTHHHHTTTCEEEECCGGGCCHHHHHHHHHHHHHH
T ss_pred             --CCCCcEEEEECCC-hHHHHHHHHhccCCCEEEEEecC-CCCccCHHHHHhCCcEEEEEEeecCCHHHHHHHHHHHHHH
Confidence              2458999999999 56788999999999999999854 23345555677899999997532       2233456667


Q ss_pred             HHcCCCCCCCceEEEeeCChhhHHHHHHH-HhcCCCceEEEEeC
Q 017916          322 LRSGKIDVKPLVTHRFGFSQKEVEEAFET-SARGGTAIKVMFNL  364 (364)
Q Consensus       322 l~~g~~~~~~~~~~~~~~~~~~~~~a~~~-~~~~~~~gkvvv~~  364 (364)
                      +++|++  ++.+.++|+|  +++++|++. ++++...||+|+++
T Consensus       312 ~~~g~l--~~~i~~~~~l--~~~~~A~~~~~~~~~~~gKvvi~~  351 (351)
T 1yb5_A          312 MEIGWL--KPVIGSQYPL--EKVAEAHENIIHGSGATGKMILLL  351 (351)
T ss_dssp             HHHTCC--CCCEEEEEEG--GGHHHHHHHHHHSSCCSSEEEEEC
T ss_pred             HHCCCc--cCccceEEcH--HHHHHHHHHHHHhCCCCeEEEEeC
Confidence            888987  7788899999  999999998 66667889999975

>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A

Probab=100.00  E-value=2.9e-47  Score=354.18  Aligned_cols=316  Identities=17%  Similarity=0.222  Sum_probs=256.7

Q ss_pred             hcceeEEEecCCc----eEEEEecCCCCC--CCcEEEEEeeeeeCcccHhhhhhcccCCccCCCC---------cccccc
Q 017916           16 EVNMAAWLLGVNT----LKIQPFELPSLG--PYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEP---------MVIGHE   80 (364)
Q Consensus        16 ~~~~~~~~~~~~~----~~~~~~~~p~~~--~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p---------~~~G~e   80 (364)
                      .+|+++++.++..    +++.+.|.|+++  ++||+|||++++||++|++.+.|.+..  ...+|         .++|||
T Consensus         2 ~~mka~~~~~~g~~~~~l~~~~~~~P~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~--~~~~P~~~~~~~p~~i~G~E   79 (364)
T 1gu7_A            2 ITAQAVLYTQHGEPKDVLFTQSFEIDDDNLAPNEVIVKTLGSPVNPSDINQIQGVYPS--KPAKTTGFGTTEPAAPCGNE   79 (364)
T ss_dssp             EEEEEEEESSCSCHHHHCEEEEEEECTTSCCTTEEEEEEEEEEECHHHHHHHHTCSSC--CCCCBSTTCCSSCBEECCSC
T ss_pred             ceEEEEEeccCCCchheeEEeeccCCCCCCCCCeEEEEEEeccCCHHHHHHhcCCCCC--CCCCCccccccCcccccCce
Confidence            4578888887653    899999988876  999999999999999999999875432  12456         899999


Q ss_pred             eeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCC------
Q 017916           81 CAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPD------  154 (364)
Q Consensus        81 ~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~lP~------  154 (364)
                      ++|+|+++|++|++|++||+|++.+                           ..+|+|+||+++++++++++|+      
T Consensus        80 ~~G~V~~vG~~v~~~~vGdrV~~~~---------------------------~~~G~~aey~~v~~~~~~~~P~~~~~~~  132 (364)
T 1gu7_A           80 GLFEVIKVGSNVSSLEAGDWVIPSH---------------------------VNFGTWRTHALGNDDDFIKLPNPAQSKA  132 (364)
T ss_dssp             CEEEEEEECTTCCSCCTTCEEEESS---------------------------SCCCCSBSEEEEEGGGEEEECCHHHHHH
T ss_pred             eEEEEEEeCCCCCcCCCCCEEEecC---------------------------CCCCcchheEecCHHHeEEcCCcccccc
Confidence            9999999999999999999998752                           1359999999999999999998      


Q ss_pred             -----CCCccchhhhh-hhHHHHHHHHH-cCCCCC-CEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhH----HHH
Q 017916          155 -----NVSLEEGAMCE-PLSVGLHACRR-ANIGPE-TNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYR----LSV  221 (364)
Q Consensus       155 -----~~~~~~aa~~~-~~~~a~~~l~~-~~~~~g-~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~----~~~  221 (364)
                           ++++++||+++ ++.|||+++++ +++++| ++|||+|+ |++|++++|+|+.+|++ ++++.++.++    .++
T Consensus       133 ~~~~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~~VlV~Ga~G~vG~~aiqlak~~Ga~-vi~~~~~~~~~~~~~~~  211 (364)
T 1gu7_A          133 NGKPNGLTINQGATISVNPLTAYLMLTHYVKLTPGKDWFIQNGGTSAVGKYASQIGKLLNFN-SISVIRDRPNLDEVVAS  211 (364)
T ss_dssp             TTCSCCCCHHHHHTCTTHHHHHHHHHHSSSCCCTTTCEEEESCTTSHHHHHHHHHHHHHTCE-EEEEECCCTTHHHHHHH
T ss_pred             ccccCCCCHHHHhhccccHHHHHHHHHHhhccCCCCcEEEECCCCcHHHHHHHHHHHHCCCE-EEEEecCccccHHHHHH
Confidence                 89999999886 78999999976 689999 99999998 99999999999999995 5555444433    677


Q ss_pred             HHHcCCCeEEecCCC-cccHHHHHHHHHHHcCCCccEEEECCCCHHHHHHHHHhcccCCEEEEEcCCCC-Cccccchhhh
Q 017916          222 AKELGADNIVKVSTN-LQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHH-EMTVPLTPAA  299 (364)
Q Consensus       222 ~~~lg~~~~~~~~~~-~~~~~~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~  299 (364)
                      ++++|+++++++++. .+++.+.+++++...+.++|++|||+|+... ..++++|+++|+++.+|.... ...++...+.
T Consensus       212 ~~~lGa~~vi~~~~~~~~~~~~~i~~~t~~~~~g~Dvvid~~G~~~~-~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~  290 (364)
T 1gu7_A          212 LKELGATQVITEDQNNSREFGPTIKEWIKQSGGEAKLALNCVGGKSS-TGIARKLNNNGLMLTYGGMSFQPVTIPTSLYI  290 (364)
T ss_dssp             HHHHTCSEEEEHHHHHCGGGHHHHHHHHHHHTCCEEEEEESSCHHHH-HHHHHTSCTTCEEEECCCCSSCCEEECHHHHH
T ss_pred             HHhcCCeEEEecCccchHHHHHHHHHHhhccCCCceEEEECCCchhH-HHHHHHhccCCEEEEecCCCCCCcccCHHHHh
Confidence            899999999886421 1467777776641125689999999995544 488999999999999986432 3345555677


Q ss_pred             hcCcEEEeeccC----------CCcHHHHHHHHHcCCCCCCCceEEEeeC-ChhhHHHHHHHHhcCCCceEEEEeC
Q 017916          300 VREVDVVGVFRY----------KNTWPLCLELLRSGKIDVKPLVTHRFGF-SQKEVEEAFETSARGGTAIKVMFNL  364 (364)
Q Consensus       300 ~~~~~~~~~~~~----------~~~~~~~~~~l~~g~~~~~~~~~~~~~~-~~~~~~~a~~~~~~~~~~gkvvv~~  364 (364)
                      .+++++.+.+..          .+.++++++++++|++.+.+  ..+|++ +++++.+||+.++++...||+|+++
T Consensus       291 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~--~~~~~~~~l~~~~~A~~~~~~~~~~gKvvv~~  364 (364)
T 1gu7_A          291 FKNFTSAGFWVTELLKNNKELKTSTLNQIIAWYEEGKLTDAK--SIETLYDGTKPLHELYQDGVANSKDGKQLITY  364 (364)
T ss_dssp             HSCCEEEECCHHHHHTTCHHHHHHHHHHHHHHHHHTCCCCCC--CEEEECCSSSCHHHHHHHHHHTGGGSCEEEEC
T ss_pred             hcCcEEEEEchhHhcccCHHHHHHHHHHHHHHHHcCCccccc--ceEEecCchhhHHHHHHHHHhCCCCceEEEeC
Confidence            899999987643          25688999999999995444  455666 2369999999999888899999975

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}

Probab=100.00  E-value=9.6e-47  Score=346.42  Aligned_cols=310  Identities=24%  Similarity=0.302  Sum_probs=258.1

Q ss_pred             ceeEEEec---CCceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCCCCCC
Q 017916           18 NMAAWLLG---VNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT   94 (364)
Q Consensus        18 ~~~~~~~~---~~~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~   94 (364)
                      |+++++..   ++.+++.+.|.|+++++||+|||.++++|++|++.+.|.+.......+|.++|||++|+|+++|++|++
T Consensus         2 Mka~~~~~~g~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~   81 (333)
T 1wly_A            2 VMAAVIHKKGGPDNFVWEEVKVGSPGPGQVRLRNTAIGVNFLDTYHRAGIPHPLVVGEPPIVVGFEAAAVVEEVGPGVTD   81 (333)
T ss_dssp             CEEEEESSCSSGGGEEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHC----------CCEECCCEEEEEEEEECTTCCS
T ss_pred             cEEEEEcccCCcceeEEEeccCCCCCCCeEEEEEEEEecCHHHHHHhCCCcCCCCCCCCCccccceeEEEEEEECCCCCC
Confidence            67777774   457999999999999999999999999999999998874311101357999999999999999999999


Q ss_pred             CCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCccc--hhhhh-hhHHHH
Q 017916           95 LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEE--GAMCE-PLSVGL  171 (364)
Q Consensus        95 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~lP~~~~~~~--aa~~~-~~~~a~  171 (364)
                      |++||+|+..+.                           .+|+|+||+++++++++++|+++++++  |++++ ++.|||
T Consensus        82 ~~~GdrV~~~~~---------------------------~~G~~aey~~v~~~~~~~iP~~~~~~~~~aa~l~~~~~ta~  134 (333)
T 1wly_A           82 FTVGERVCTCLP---------------------------PLGAYSQERLYPAEKLIKVPKDLDLDDVHLAGLMLKGMTAQ  134 (333)
T ss_dssp             CCTTCEEEECSS---------------------------SCCCSBSEEEEEGGGCEECCTTCCCCHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEecC---------------------------CCCcceeEEEecHHHcEeCCCCCChHHhCccchhhhHHHHH
Confidence            999999976421                           259999999999999999999999999  67654 899999


Q ss_pred             HHHH-HcCCCCCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHH
Q 017916          172 HACR-RANIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQK  249 (364)
Q Consensus       172 ~~l~-~~~~~~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~  249 (364)
                      +++. .+++++|++|||+|+ |++|++++|+++..|+ .|+++++++++.+.++++|++.++++..  +++.+.+.+.. 
T Consensus       135 ~~l~~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~G~-~Vi~~~~~~~~~~~~~~~g~~~~~d~~~--~~~~~~i~~~~-  210 (333)
T 1wly_A          135 YLLHQTHKVKPGDYVLIHAAAGGMGHIMVPWARHLGA-TVIGTVSTEEKAETARKLGCHHTINYST--QDFAEVVREIT-  210 (333)
T ss_dssp             HHHHTTSCCCTTCEEEETTTTSTTHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHTCSEEEETTT--SCHHHHHHHHH-
T ss_pred             HHHHHhhCCCCCCEEEEECCccHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCCEEEECCC--HHHHHHHHHHh-
Confidence            9996 689999999999997 9999999999999999 7888889999999999999998887643  56666666654 


Q ss_pred             HcCCCccEEEECCCCHHHHHHHHHhcccCCEEEEEcCCCC-Cccccch-hhhhcC--cEEEeeccC--------CCcHHH
Q 017916          250 AMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHH-EMTVPLT-PAAVRE--VDVVGVFRY--------KNTWPL  317 (364)
Q Consensus       250 ~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~-~~~~~~--~~~~~~~~~--------~~~~~~  317 (364)
                       .+.++|++|||+|. ..++.++++|+++|+++.+|.... ...++.. .++.++  +++.+.+..        .+.+++
T Consensus       211 -~~~~~d~vi~~~g~-~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~  288 (333)
T 1wly_A          211 -GGKGVDVVYDSIGK-DTLQKSLDCLRPRGMCAAYGHASGVADPIRVVEDLGVRGSLFITRPALWHYMSNRSEIDEGSKC  288 (333)
T ss_dssp             -TTCCEEEEEECSCT-TTHHHHHHTEEEEEEEEECCCTTCCCCCCCHHHHTTTTTSCEEECCCGGGGSCSHHHHHHHHHH
T ss_pred             -CCCCCeEEEECCcH-HHHHHHHHhhccCCEEEEEecCCCCcCCCChhHhhhhcCCcEEEEEeehhhccCHHHHHHHHHH
Confidence             24589999999996 788999999999999999986442 2344445 566788  888886431        235889


Q ss_pred             HHHHHHcCCCCCCCceEEEeeCChhhHHHHHHHHhcCCCceEEEEeC
Q 017916          318 CLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  364 (364)
Q Consensus       318 ~~~~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  364 (364)
                      +++++++|++  ++.++++|+|  +++++|++.++++...||+|+++
T Consensus       289 ~~~l~~~g~l--~~~i~~~~~l--~~~~~A~~~~~~~~~~gKvvi~~  331 (333)
T 1wly_A          289 LFDAVKAGVL--HSSVAKTFPL--REAAAAHKYMGGRQTIGSIVLLP  331 (333)
T ss_dssp             HHHHHHTTSC--CCCEEEEEEG--GGHHHHHHHHHHCSCCSEEEEET
T ss_pred             HHHHHHCCCc--CCCcceEEeH--HHHHHHHHHHHcCCCceEEEEEe
Confidence            9999999998  6788999999  99999999999988899999874

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=1.9e-46  Score=343.62  Aligned_cols=307  Identities=23%  Similarity=0.255  Sum_probs=258.9

Q ss_pred             ceeEEEec---CCceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCCCCCC
Q 017916           18 NMAAWLLG---VNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT   94 (364)
Q Consensus        18 ~~~~~~~~---~~~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~   94 (364)
                      |+++++..   ++.+++.+.|.|+++++||+|||.++++|++|++.+.|.+.   ...+|.++|||++|+|+++|+++++
T Consensus         2 Mka~~~~~~g~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~---~~~~p~v~G~E~~G~V~~vG~~v~~   78 (327)
T 1qor_A            2 ATRIEFHKHGGPEVLQAVEFTPADPAENEIQVENKAIGINFIDTYIRSGLYP---PPSLPSGLGTEAAGIVSKVGSGVKH   78 (327)
T ss_dssp             CEEEEBSSCCSGGGCEEEECCCCCCCTTEEEEEEEEEECCHHHHHHHHTSSC---CSSSSBCCCSCEEEEEEEECTTCCS
T ss_pred             cEEEEEcCCCChhheEEeccCCCCCCCCEEEEEEEEEecCHHHHHHhCCCCC---CCCCCCCCCceeEEEEEEECCCCCC
Confidence            67777764   45799999999999999999999999999999999887542   2357999999999999999999999


Q ss_pred             CCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCccchhhh-hhhHHHHHH
Q 017916           95 LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMC-EPLSVGLHA  173 (364)
Q Consensus        95 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~lP~~~~~~~aa~~-~~~~~a~~~  173 (364)
                      |++||+| +.+.                          ..+|+|+||+++++++++++|+++++++||++ .+++|||++
T Consensus        79 ~~~GdrV-~~~g--------------------------~~~G~~aey~~v~~~~~~~iP~~l~~~~aa~l~~~~~ta~~a  131 (327)
T 1qor_A           79 IKAGDRV-VYAQ--------------------------SALGAYSSVHNIIADKAAILPAAISFEQAAASFLKGLTVYYL  131 (327)
T ss_dssp             CCTTCEE-EESC--------------------------CSSCCSBSEEEEEGGGEEECCTTSCHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCEE-EECC--------------------------CCCceeeeEEEecHHHcEECCCCCCHHHHHHhhhHHHHHHHH
Confidence            9999999 4310                          13499999999999999999999999998766 489999999


Q ss_pred             HH-HcCCCCCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHc
Q 017916          174 CR-RANIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAM  251 (364)
Q Consensus       174 l~-~~~~~~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~  251 (364)
                      +. .+++++|++|||+|+ |++|++++|+++..|+ .|+++++++++.+.++++|++.++++..  +++.+.+.+..  .
T Consensus       132 l~~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~G~-~V~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~~~~~~~--~  206 (327)
T 1qor_A          132 LRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGA-KLIGTVGTAQKAQSALKAGAWQVINYRE--EDLVERLKEIT--G  206 (327)
T ss_dssp             HHTTSCCCTTCEEEESSTTBHHHHHHHHHHHHHTC-EEEEEESSHHHHHHHHHHTCSEEEETTT--SCHHHHHHHHT--T
T ss_pred             HHHhhCCCCCCEEEEECCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCEEEECCC--ccHHHHHHHHh--C
Confidence            96 689999999999996 9999999999999999 6888888999999999999998887643  56666665543  2


Q ss_pred             CCCccEEEECCCCHHHHHHHHHhcccCCEEEEEcCCCCC-ccccchhhhhc-CcEEEeecc---------CCCcHHHHHH
Q 017916          252 GTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHE-MTVPLTPAAVR-EVDVVGVFR---------YKNTWPLCLE  320 (364)
Q Consensus       252 ~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~-~~~~~~~~~---------~~~~~~~~~~  320 (364)
                      +.++|++|||+| .+.++.++++|+++|+++.+|..... ..++...+..+ .+++.+...         ..+.++++++
T Consensus       207 ~~~~D~vi~~~g-~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  285 (327)
T 1qor_A          207 GKKVRVVYDSVG-RDTWERSLDCLQRRGLMVSFGNSSGAVTGVNLGILNQKGSLYVTRPSLQGYITTREELTEASNELFS  285 (327)
T ss_dssp             TCCEEEEEECSC-GGGHHHHHHTEEEEEEEEECCCTTCCCCCBCTHHHHHTTSCEEECCCHHHHCCSHHHHHHHHHHHHH
T ss_pred             CCCceEEEECCc-hHHHHHHHHHhcCCCEEEEEecCCCCCCccCHHHHhhccceEEEccchhhhcCCHHHHHHHHHHHHH
Confidence            457999999999 78899999999999999999864432 34555566677 787775432         1345789999


Q ss_pred             HHHcCCCCCCCceE--EEeeCChhhHHHHHHHHhcCCCceEEEEeC
Q 017916          321 LLRSGKIDVKPLVT--HRFGFSQKEVEEAFETSARGGTAIKVMFNL  364 (364)
Q Consensus       321 ~l~~g~~~~~~~~~--~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  364 (364)
                      ++++|++  ++.+.  ++|+|  +++++|++.++++...||+|+++
T Consensus       286 l~~~g~l--~~~i~~~~~~~l--~~~~~A~~~~~~~~~~gKvvl~~  327 (327)
T 1qor_A          286 LIASGVI--KVDVAEQQKYPL--KDAQRAHEILESRATQGSSLLIP  327 (327)
T ss_dssp             HHHTTSS--CCCCCGGGEEEG--GGHHHHHHHHHTTCCCBCCEEEC
T ss_pred             HHHCCCc--ccccccCcEEcH--HHHHHHHHHHHhCCCCceEEEeC
Confidence            9999998  56677  89999  99999999999998899999874

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*

Probab=100.00  E-value=1.9e-46  Score=347.89  Aligned_cols=315  Identities=20%  Similarity=0.250  Sum_probs=260.0

Q ss_pred             ccccccchhcceeEEEecC-----CceEE-EEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccce
Q 017916            8 QGEKEDGEEVNMAAWLLGV-----NTLKI-QPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHEC   81 (364)
Q Consensus         8 ~~~~~~~~~~~~~~~~~~~-----~~~~~-~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~   81 (364)
                      ++..+.++.+|+++++.++     +.+++ .+.|.|+++++||+|||.+++||++|+..+.|.+..  ...+|.++|||+
T Consensus        14 ~~~~~~~~~~MkA~~~~~~g~~~~~~l~~~~~~p~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~--~~~~P~i~G~E~   91 (362)
T 2c0c_A           14 GTENLYFQSMMQKLVVTRLSPNFREAVTLSRDCPVPLPGDGDLLVRNRFVGVNASDINYSAGRYDP--SVKPPFDIGFEG   91 (362)
T ss_dssp             SHHHHHHCCEEEEEEECSCCSSHHHHEEEEEEEECCCCCTTEEEEEEEEEECCTTHHHHHTTTTCT--TCCSCEECCSEE
T ss_pred             CcccccchhhceEEEEeecCCCccceeEEEeecCCCCCCCCeEEEEEEEeccCHHHHHHhcCCCCC--CCCCCCCCCcee
Confidence            3344666778999998865     35889 999999999999999999999999999998875422  246799999999


Q ss_pred             eEEEEEeCCCCC-CCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCccc
Q 017916           82 AGVIEKVGSEVK-TLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEE  160 (364)
Q Consensus        82 ~G~V~~vG~~v~-~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~lP~~~~~~~  160 (364)
                      +|+|+++|++|+ +|++||+|++.                             ..|+|+||+++++++++++|+. .++.
T Consensus        92 ~G~V~~vG~~V~~~~~vGdrV~~~-----------------------------~~G~~aey~~v~~~~~~~~P~~-~~~a  141 (362)
T 2c0c_A           92 IGEVVALGLSASARYTVGQAVAYM-----------------------------APGSFAEYTVVPASIATPVPSV-KPEY  141 (362)
T ss_dssp             EEEEEEECTTGGGTCCTTCEEEEE-----------------------------CSCCSBSEEEEEGGGCEECSSS-CHHH
T ss_pred             EEEEEEECCCccCCCCCCCEEEEc-----------------------------cCCcceeEEEEcHHHeEECCCC-chHh
Confidence            999999999999 99999999875                             2599999999999999999996 4444


Q ss_pred             hhhhhhhHHHHHHHH-HcCCCCCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcc
Q 017916          161 GAMCEPLSVGLHACR-RANIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQ  238 (364)
Q Consensus       161 aa~~~~~~~a~~~l~-~~~~~~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~  238 (364)
                      |++..+++|||+++. .+++++|++|||+|+ |++|++++|+|+.+|+ .|+++++++++.++++++|++.+++++.  +
T Consensus       142 aal~~~~~ta~~al~~~~~~~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga-~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~--~  218 (362)
T 2c0c_A          142 LTLLVSGTTAYISLKELGGLSEGKKVLVTAAAGGTGQFAMQLSKKAKC-HVIGTCSSDEKSAFLKSLGCDRPINYKT--E  218 (362)
T ss_dssp             HTTTTHHHHHHHHHHHHTCCCTTCEEEETTTTBTTHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHTTCSEEEETTT--S
T ss_pred             hcccchHHHHHHHHHHhcCCCCCCEEEEeCCCcHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHHcCCcEEEecCC--h
Confidence            555568999999994 589999999999996 9999999999999999 6888889999999999999999888654  5


Q ss_pred             cHHHHHHHHHHHcCCCccEEEECCCCHHHHHHHHHhcccCCEEEEEcCCCCCc-----------cccchhhhhcCcEEEe
Q 017916          239 DIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEM-----------TVPLTPAAVREVDVVG  307 (364)
Q Consensus       239 ~~~~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~-----------~~~~~~~~~~~~~~~~  307 (364)
                      ++.+.+++.   .+.++|++|||+|. ..++.++++|+++|+++.+|......           .+ ...++.+++++.+
T Consensus       219 ~~~~~~~~~---~~~g~D~vid~~g~-~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~g  293 (362)
T 2c0c_A          219 PVGTVLKQE---YPEGVDVVYESVGG-AMFDLAVDALATKGRLIVIGFISGYQTPTGLSPVKAGTL-PAKLLKKSASVQG  293 (362)
T ss_dssp             CHHHHHHHH---CTTCEEEEEECSCT-HHHHHHHHHEEEEEEEEECCCGGGTTSSSCCCCCCCTTH-HHHHHHHTCEEEE
T ss_pred             hHHHHHHHh---cCCCCCEEEECCCH-HHHHHHHHHHhcCCEEEEEeCCCCcCccccccccccccc-HHHHHhhcceEEE
Confidence            666666554   25689999999995 78899999999999999998532110           11 1456778999998


Q ss_pred             eccC------CCcHHHHHHHHHcCCCCCCCc------eEEEeeCChhhHHHHHHHHhcCCCceEEEEeC
Q 017916          308 VFRY------KNTWPLCLELLRSGKIDVKPL------VTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  364 (364)
Q Consensus       308 ~~~~------~~~~~~~~~~l~~g~~~~~~~------~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  364 (364)
                      .+..      .+.++++++++++|++.+...      +.+.|+|  +++++|++.++++...||+|+++
T Consensus       294 ~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~~~~~~~~~l--~~~~~A~~~~~~~~~~gKvvv~~  360 (362)
T 2c0c_A          294 FFLNHYLSKYQAAMSHLLEMCVSGDLVCEVDLGDLSPEGRFTGL--ESIFRAVNYMYMGKNTGKIVVEL  360 (362)
T ss_dssp             CCGGGCGGGHHHHHHHHHHHHHTTCSCCCEECSTTSTTCSCBST--THHHHHHHHHHTTCCSBEEEEEC
T ss_pred             EEhhhhhhhHHHHHHHHHHHHHCCCeEeeeccccccccccccCH--HHHHHHHHHHHcCCCCceEEEEc
Confidence            7643      346889999999999843222      2245788  99999999999988899999874

>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*

Probab=100.00  E-value=1.7e-45  Score=338.57  Aligned_cols=301  Identities=18%  Similarity=0.188  Sum_probs=255.0

Q ss_pred             hcceeEEEe-------cCCceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccc----eeEE
Q 017916           16 EVNMAAWLL-------GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHE----CAGV   84 (364)
Q Consensus        16 ~~~~~~~~~-------~~~~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e----~~G~   84 (364)
                      .+|+++++.       +++.+++.+.|.|+++++||+|||+++++|+.|+..+.+...    ...|.++|||    ++|+
T Consensus         6 ~~mka~v~~~~~~g~~~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~d~~~~~~~~~----~~~p~~~G~e~g~~~~G~   81 (336)
T 4b7c_A            6 QINRQYQLAQRPSGLPGRDTFSFVETPLGEPAEGQILVKNEYLSLDPAMRGWMNDARS----YIPPVGIGEVMRALGVGK   81 (336)
T ss_dssp             CEEEEEEECSCCSSSCCTTSEEEEEEECCCCCTTCEEEEEEEEECCTHHHHHHSCSCC----SSCCCCTTSBCCCEEEEE
T ss_pred             ccccEEEEEecCCCCCCCCceEEEeccCCCCCCCEEEEEEEEEEeCHHHHhhhhcccc----cCCCCCCCcccCCceEEE
Confidence            347788776       468999999999999999999999999999999987765321    2456677776    7999


Q ss_pred             EEEeCCCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCccch--h
Q 017916           85 IEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEG--A  162 (364)
Q Consensus        85 V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~lP~~~~~~~a--a  162 (364)
                      |++.  ++++|++||||++.                               |+|+||+++++++++++|+++++.++  +
T Consensus        82 V~~~--~v~~~~vGdrV~~~-------------------------------G~~aey~~v~~~~~~~~P~~~~~~~~a~a  128 (336)
T 4b7c_A           82 VLVS--KHPGFQAGDYVNGA-------------------------------LGVQDYFIGEPKGFYKVDPSRAPLPRYLS  128 (336)
T ss_dssp             EEEE--CSTTCCTTCEEEEE-------------------------------CCSBSEEEECCTTCEEECTTTSCGGGGGT
T ss_pred             EEec--CCCCCCCCCEEecc-------------------------------CCceEEEEechHHeEEcCCCCCchHHHhh
Confidence            9984  58899999999864                               89999999999999999999977665  4


Q ss_pred             hh-hhhHHHHHHH-HHcCCCCCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHH-HHcCCCeEEecCCCcc
Q 017916          163 MC-EPLSVGLHAC-RRANIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KELGADNIVKVSTNLQ  238 (364)
Q Consensus       163 ~~-~~~~~a~~~l-~~~~~~~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~-~~lg~~~~~~~~~~~~  238 (364)
                      .+ .+++|||+++ +.+++++|++|||+|+ |++|++++|+|+..|+ .|+++++++++.+.+ +++|++.++++..  +
T Consensus       129 ~l~~~~~tA~~al~~~~~~~~g~~vlI~Ga~g~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~~~g~~~~~~~~~--~  205 (336)
T 4b7c_A          129 ALGMTGMTAYFALLDVGQPKNGETVVISGAAGAVGSVAGQIARLKGC-RVVGIAGGAEKCRFLVEELGFDGAIDYKN--E  205 (336)
T ss_dssp             TTSHHHHHHHHHHHHTTCCCTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHTTCCSEEEETTT--S
T ss_pred             hcccHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHcCCCEEEECCC--H
Confidence            44 5899999999 6799999999999998 9999999999999999 788888899999998 8999999888654  6


Q ss_pred             cHHHHHHHHHHHcCCCccEEEECCCCHHHHHHHHHhcccCCEEEEEcCCC-----C--CccccchhhhhcCcEEEeeccC
Q 017916          239 DIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGH-----H--EMTVPLTPAAVREVDVVGVFRY  311 (364)
Q Consensus       239 ~~~~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~-----~--~~~~~~~~~~~~~~~~~~~~~~  311 (364)
                      ++.+.+++..   ++++|++|||+| .+.+..++++|+++|+++.+|...     .  ...++...++.+++++.+....
T Consensus       206 ~~~~~~~~~~---~~~~d~vi~~~g-~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~  281 (336)
T 4b7c_A          206 DLAAGLKREC---PKGIDVFFDNVG-GEILDTVLTRIAFKARIVLCGAISQYNNKEAVRGPANYLSLLVNRARMEGMVVM  281 (336)
T ss_dssp             CHHHHHHHHC---TTCEEEEEESSC-HHHHHHHHTTEEEEEEEEECCCGGGGC------CCTTTTHHHHTTCEEEECCGG
T ss_pred             HHHHHHHHhc---CCCceEEEECCC-cchHHHHHHHHhhCCEEEEEeecccccCCcccccchhHHHHHhCCcEEEEEEhh
Confidence            7777776653   568999999999 578899999999999999998543     1  1244556678899999998764


Q ss_pred             ------CCcHHHHHHHHHcCCCCCCCceEEEeeCChhhHHHHHHHHhcCCCceEEEEeC
Q 017916          312 ------KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  364 (364)
Q Consensus       312 ------~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  364 (364)
                            .+.++++++++++|++  ++.+...|+|  +++++||+.++++...||+|+++
T Consensus       282 ~~~~~~~~~~~~~~~l~~~g~l--~~~~~~~~~l--~~~~~A~~~~~~~~~~gKvvi~~  336 (336)
T 4b7c_A          282 DYAQRFPEGLKEMATWLAEGKL--QSREDIVEGL--ETFPETLLKLFSGENFGKLVLKV  336 (336)
T ss_dssp             GGGGGHHHHHHHHHHHHHTTSS--CCCEEEEECG--GGHHHHHHHHHTTCCCSEEEEEC
T ss_pred             hhhhhhHHHHHHHHHHHHCCCc--ccceeeecCH--HHHHHHHHHHHcCCCCceEEEeC
Confidence                  2678899999999999  5556667888  99999999999999999999985

>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*

Probab=100.00  E-value=7.9e-47  Score=345.80  Aligned_cols=306  Identities=18%  Similarity=0.202  Sum_probs=255.4

Q ss_pred             ceeEEEecCC---ceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCCCCCC
Q 017916           18 NMAAWLLGVN---TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT   94 (364)
Q Consensus        18 ~~~~~~~~~~---~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~   94 (364)
                      |+++++.++.   .+++.+.|.|+++++||+|||+++++|++|++.+.|.+.  ....+|.++|||++|+|+++|  +++
T Consensus         1 MkA~~~~~~g~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~--~~~~~p~v~G~E~~G~V~~~G--v~~   76 (324)
T 3nx4_A            1 MQALILEQQDGKTLASVQHLEESQLPAGDVTVDVHWSSLNYKDALAITGKGK--IIRHFPMIPGIDFAGTVHASE--DPR   76 (324)
T ss_dssp             CEEEEEEESSSSEEEEEEECCGGGSCCCSEEEEEEEEEECHHHHHHHHTCTT--CCCSSSBCCCSEEEEEEEEES--STT
T ss_pred             CceEEEecCCCCceeeEeecCCCCCCCCEEEEEEEEEeCCHHHHhhhcCCCC--CCCCCCccccceeEEEEEEeC--CCC
Confidence            6788888653   589999999999999999999999999999999988543  225789999999999999998  578


Q ss_pred             CCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCccchhhhh-hhHHHHHH
Q 017916           95 LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHA  173 (364)
Q Consensus        95 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~lP~~~~~~~aa~~~-~~~~a~~~  173 (364)
                      |++||+|++.+.   .                   .....+|+|+||+.+++++++++|+++++++||+++ .+.|||++
T Consensus        77 ~~vGdrV~~~~~---~-------------------~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~a  134 (324)
T 3nx4_A           77 FHAGQEVLLTGW---G-------------------VGENHWGGLAERARVKGDWLVALPAGLSSRNAMIIGTAGFTAMLC  134 (324)
T ss_dssp             CCTTCEEEEECT---T-------------------BTTTBCCSSBSEEEECGGGCEECCTTCCHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEccc---c-------------------cCCCCCCceeeEEecCHHHcEECCCCCCHHHHHHhhhHHHHHHHH
Confidence            999999997631   0                   012357999999999999999999999999999886 77889987


Q ss_pred             H---HHcCCCCCC-EEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHH
Q 017916          174 C---RRANIGPET-NVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQ  248 (364)
Q Consensus       174 l---~~~~~~~g~-~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~  248 (364)
                      +   .+.++++++ +|||+|+ |++|++++|+|+.+|+ .|++++.+++|.++++++|+++++++.+..  .   ++++ 
T Consensus       135 l~~~~~~~~~~~~g~VlV~Ga~G~vG~~aiqla~~~Ga-~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~--~---~~~~-  207 (324)
T 3nx4_A          135 VMALEDAGIRPQDGEVVVTGASGGVGSTAVALLHKLGY-QVAAVSGRESTHGYLKSLGANRILSRDEFA--E---SRPL-  207 (324)
T ss_dssp             HHHHHHTTCCGGGCCEEESSTTSHHHHHHHHHHHHTTC-CEEEEESCGGGHHHHHHHTCSEEEEGGGSS--C---CCSS-
T ss_pred             HHHhhhcccCCCCCeEEEECCCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhcCCCEEEecCCHH--H---HHhh-
Confidence            7   446677743 4999998 9999999999999999 688888999999999999999999875422  1   2222 


Q ss_pred             HHcCCCccEEEECCCCHHHHHHHHHhcccCCEEEEEcCCCCC-ccccchhhhhcCcEEEeeccC-------CCcHHHHHH
Q 017916          249 KAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHE-MTVPLTPAAVREVDVVGVFRY-------KNTWPLCLE  320 (364)
Q Consensus       249 ~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~  320 (364)
                        .+.++|++|||+| .+.++.++++|+++|+++.+|..... ...+...++.+++++.+....       .+.++++++
T Consensus       208 --~~~~~d~v~d~~g-~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~  284 (324)
T 3nx4_A          208 --EKQLWAGAIDTVG-DKVLAKVLAQMNYGGCVAACGLAGGFALPTTVMPFILRNVRLQGVDSVMTPPARRAEAWARLVK  284 (324)
T ss_dssp             --CCCCEEEEEESSC-HHHHHHHHHTEEEEEEEEECCCTTCSEEEEESHHHHHHCCEEEECCSTTCCHHHHHHHHHHHHH
T ss_pred             --cCCCccEEEECCC-cHHHHHHHHHHhcCCEEEEEecCCCCCCCCCHHHHhhcCeEEEEEeccccChHHHHHHHHHHHH
Confidence              2468999999999 56899999999999999999865443 355666788899999997643       245788999


Q ss_pred             HHHcCCCCCCCceEEEeeCChhhHHHHHHHHhcCCCceEEEEeC
Q 017916          321 LLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  364 (364)
Q Consensus       321 ~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  364 (364)
                      ++++|++  ++. .+.|+|  +++++||+.+++++..||+|+++
T Consensus       285 l~~~g~l--~~~-~~~~~l--~~~~~A~~~~~~~~~~gkvvv~~  323 (324)
T 3nx4_A          285 DLPESFY--AQA-ATEITL--ADAPKFADAIINNQVQGRTLVKI  323 (324)
T ss_dssp             HSCHHHH--HHH-EEEEEG--GGHHHHHHHHHTTCCCSEEEEEC
T ss_pred             HHHcCCC--CCC-ceeEeH--HHHHHHHHHHHhCCCCceEEEec
Confidence            9999988  555 899999  99999999999999999999975

>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}

Probab=100.00  E-value=2.5e-45  Score=342.22  Aligned_cols=312  Identities=22%  Similarity=0.293  Sum_probs=250.5

Q ss_pred             hhcceeEEEecC---CceEE-EEecCCCC-CCCcEEEEEeeeeeCcccHhhhhhcccC------------CccCCCCccc
Q 017916           15 EEVNMAAWLLGV---NTLKI-QPFELPSL-GPYDVLVRMKAVGICGSDVHYLKTLRCA------------DFVVKEPMVI   77 (364)
Q Consensus        15 ~~~~~~~~~~~~---~~~~~-~~~~~p~~-~~~~VlV~v~~~~l~~~d~~~~~g~~~~------------~~~~~~p~~~   77 (364)
                      ...|+++++..+   +.+++ .+.|.|++ +++||+|||++++||++|++.+.|....            .....+|.++
T Consensus        19 ~~~mka~~~~~~g~~~~l~~~~~~p~P~~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~~~~~~~~~~~~~~~P~v~   98 (375)
T 2vn8_A           19 YFQSMAWVIDKYGKNEVLRFTQNMMMPIIHYPNEVIVKVHAASVNPIDVNMRSGYGATALNMKRDPLHVKIKGEEFPLTL   98 (375)
T ss_dssp             CCCEEEEEBSSCCSGGGCEEEEEECCCCCCSTTEEEEEEEEEEECHHHHHHHTTTTHHHHHHHHCTTCCSCTTTTCSBCC
T ss_pred             CccceeEEeccCCCccceEEeccccCCCCCCCCEEEEEEEEEEcCHHHHHHhccCccccccccccccccccccccCCccc
Confidence            345778877754   57899 99999985 9999999999999999999998874210            1112479999


Q ss_pred             ccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCC
Q 017916           78 GHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVS  157 (364)
Q Consensus        78 G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~lP~~~~  157 (364)
                      |||++|+|+++|++|++|++||+|++.+.                         ...+|+|+||+++++++++++|++++
T Consensus        99 G~E~~G~V~~vG~~V~~~~vGDrV~~~~~-------------------------~~~~G~~aey~~v~~~~~~~iP~~ls  153 (375)
T 2vn8_A           99 GRDVSGVVMECGLDVKYFKPGDEVWAAVP-------------------------PWKQGTLSEFVVVSGNEVSHKPKSLT  153 (375)
T ss_dssp             CCEEEEEEEEECTTCCSCCTTCEEEEECC-------------------------TTSCCSSBSEEEEEGGGEEECCTTSC
T ss_pred             ceeeeEEEEEeCCCCCCCCCCCEEEEecC-------------------------CCCCccceeEEEEcHHHeeeCCCCCC
Confidence            99999999999999999999999997632                         12469999999999999999999999


Q ss_pred             ccchhhhh-hhHHHHHHHH-HcC----CCCCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeE
Q 017916          158 LEEGAMCE-PLSVGLHACR-RAN----IGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNI  230 (364)
Q Consensus       158 ~~~aa~~~-~~~~a~~~l~-~~~----~~~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~  230 (364)
                      +++||+++ .+.|||+++. .++    +++|++|||+|+ |++|++++|+|+.+|+ .|++++ ++++.++++++|++.+
T Consensus       154 ~~~Aa~l~~~~~tA~~al~~~~~~~~~~~~g~~VlV~Ga~G~vG~~~~qla~~~Ga-~Vi~~~-~~~~~~~~~~lGa~~v  231 (375)
T 2vn8_A          154 HTQAASLPYVALTAWSAINKVGGLNDKNCTGKRVLILGASGGVGTFAIQVMKAWDA-HVTAVC-SQDASELVRKLGADDV  231 (375)
T ss_dssp             HHHHTTSHHHHHHHHHHHTTTTCCCTTTCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEE-CGGGHHHHHHTTCSEE
T ss_pred             HHHHhhhHHHHHHHHHHHHHhcccccccCCCCEEEEECCCCHHHHHHHHHHHhCCC-EEEEEe-ChHHHHHHHHcCCCEE
Confidence            99999886 6889999994 688    999999999996 9999999999999999 577776 6788999999999998


Q ss_pred             EecCCCcccHHHHHHHHHHHcCCCccEEEECCCCH-HHHHHHHHhcccCCEEEEEcCCCCC-cc---ccc------hhhh
Q 017916          231 VKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFN-KTMSTALSATRAGGKVCLVGMGHHE-MT---VPL------TPAA  299 (364)
Q Consensus       231 ~~~~~~~~~~~~~i~~~~~~~~~~~d~vid~~g~~-~~~~~~~~~l~~~G~~v~~g~~~~~-~~---~~~------~~~~  299 (364)
                      +++.+  +++.+.+++     ..++|++|||+|+. ..+..++++++++|+++.+|..... ..   +..      ..+.
T Consensus       232 ~~~~~--~~~~~~~~~-----~~g~D~vid~~g~~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~  304 (375)
T 2vn8_A          232 IDYKS--GSVEEQLKS-----LKPFDFILDNVGGSTETWAPDFLKKWSGATYVTLVTPFLLNMDRLGIADGMLQTGVTVG  304 (375)
T ss_dssp             EETTS--SCHHHHHHT-----SCCBSEEEESSCTTHHHHGGGGBCSSSCCEEEESCCSHHHHHHHHCHHHHHHHHHHHHH
T ss_pred             EECCc--hHHHHHHhh-----cCCCCEEEECCCChhhhhHHHHHhhcCCcEEEEeCCCcccccccccccchhheeehhhc
Confidence            88654  466555533     25899999999976 5668889999999999999853221 00   000      0111


Q ss_pred             h-------cCcEEEeeccC--CCcHHHHHHHHHcCCCCCCCceEEEeeCChhhHHHHHHHHhcCCCceEEEEeC
Q 017916          300 V-------REVDVVGVFRY--KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  364 (364)
Q Consensus       300 ~-------~~~~~~~~~~~--~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  364 (364)
                      .       ++..+.+....  .+.++++++++++|++  ++.+.++|+|  +++++|++.++++...||+|+++
T Consensus       305 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~g~l--~~~i~~~~~l--~~~~~A~~~~~~~~~~gKvvi~~  374 (375)
T 2vn8_A          305 SKALKHFWKGVHYRWAFFMASGPCLDDIAELVDAGKI--RPVIEQTFPF--SKVPEAFLKVERGHARGKTVINV  374 (375)
T ss_dssp             HHHHHHHHTTCEEEECCCCCCHHHHHHHHHHHHTTSC--CCCEEEEEEG--GGHHHHHHHHHHCCCSSEEEEEC
T ss_pred             cccccccccCcceEEEEeCCCHHHHHHHHHHHHCCCc--ccCcCeEECH--HHHHHHHHHHHcCCCCCeEEEEe
Confidence            1       44455443322  3467999999999998  6788899999  99999999999998889999975

>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*

Probab=100.00  E-value=1.9e-46  Score=344.16  Aligned_cols=313  Identities=19%  Similarity=0.257  Sum_probs=252.0

Q ss_pred             chhcceeEEEecCC---ceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCC
Q 017916           14 GEEVNMAAWLLGVN---TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGS   90 (364)
Q Consensus        14 ~~~~~~~~~~~~~~---~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~   90 (364)
                      |+.+|+++++.++.   .+++.+.|.|+++++||+|||+++++|++|++.+.|.+.  ....+|.++|||++|+|+++  
T Consensus         1 m~~~mka~~~~~~g~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~--~~~~~p~i~G~E~~G~V~~~--   76 (330)
T 1tt7_A            1 MSTLFQALQAEKNADDVSVHVKTISTEDLPKDGVLIKVAYSGINYKDGLAGKAGGN--IVREYPLILGIDAAGTVVSS--   76 (330)
T ss_dssp             -CCEEEEEEECCGGGSCCCEEEEEESSSSCSSSEEEEECCEEECHHHHHHTSTTCT--TCSSCSEECCSEEEEEEEEC--
T ss_pred             CCCcceEEEEecCCCCcceeEeecCCCCCCCCEEEEEEEEEecCHHHHhhhcCCCC--CcCCCCccccceEEEEEEEc--
Confidence            34568899888653   899999999999999999999999999999998887532  12457999999999999996  


Q ss_pred             CCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCccchhhhh-hhHH
Q 017916           91 EVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSV  169 (364)
Q Consensus        91 ~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~lP~~~~~~~aa~~~-~~~~  169 (364)
                      ++++|++||||++.+..                     .+ ...+|+|+||+++++++++++|+++++++|++++ .+.|
T Consensus        77 ~v~~~~vGdrV~~~~~~---------------------~g-~~~~G~~aey~~v~~~~~~~iP~~l~~~~aa~l~~~~~t  134 (330)
T 1tt7_A           77 NDPRFAEGDEVIATSYE---------------------LG-VSRDGGLSEYASVPGDWLVPLPQNLSLKEAMVYGTAGFT  134 (330)
T ss_dssp             SSTTCCTTCEEEEESTT---------------------BT-TTBCCSSBSSEEECGGGEEECCTTCCHHHHHHHHHHHHH
T ss_pred             CCCCCCCCCEEEEcccc---------------------cC-CCCCccceeEEEecHHHeEECCCCCCHHHHhhccchHHH
Confidence            46889999999875210                     00 1346999999999999999999999999999886 6778


Q ss_pred             HHHHH---HHcCCCCCC-EEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHH
Q 017916          170 GLHAC---RRANIGPET-NVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEV  244 (364)
Q Consensus       170 a~~~l---~~~~~~~g~-~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i  244 (364)
                      ||.++   ++.++++|+ +|||+|+ |++|++++|+|+.+|++ ++++++++++.++++++|+++++++++.  + .+.+
T Consensus       135 a~~~l~~~~~~~~~~g~~~VlV~Ga~G~vG~~~~q~a~~~Ga~-vi~~~~~~~~~~~~~~lGa~~v~~~~~~--~-~~~~  210 (330)
T 1tt7_A          135 AALSVHRLEQNGLSPEKGSVLVTGATGGVGGIAVSMLNKRGYD-VVASTGNREAADYLKQLGASEVISREDV--Y-DGTL  210 (330)
T ss_dssp             HHHHHHHHHHTTCCGGGCCEEEESTTSHHHHHHHHHHHHHTCC-EEEEESSSSTHHHHHHHTCSEEEEHHHH--C-SSCC
T ss_pred             HHHHHHHHHhcCcCCCCceEEEECCCCHHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHcCCcEEEECCCc--h-HHHH
Confidence            88766   457899997 9999998 99999999999999995 7888888899999999999998875321  0 0011


Q ss_pred             HHHHHHcCCCccEEEECCCCHHHHHHHHHhcccCCEEEEEcCCCC-CccccchhhhhcCcEEEeeccC-------CCcHH
Q 017916          245 EKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHH-EMTVPLTPAAVREVDVVGVFRY-------KNTWP  316 (364)
Q Consensus       245 ~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~-------~~~~~  316 (364)
                      +++   .+.++|++|||+|+ +.+..++++++++|+++.+|.... ....+...++.+++++.+....       .+.++
T Consensus       211 ~~~---~~~~~d~vid~~g~-~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~  286 (330)
T 1tt7_A          211 KAL---SKQQWQGAVDPVGG-KQLASLLSKIQYGGSVAVSGLTGGGEVPATVYPFILRGVSLLGIDSVYCPMDVRAAVWE  286 (330)
T ss_dssp             CSS---CCCCEEEEEESCCT-HHHHHHHTTEEEEEEEEECCCSSCSCEEECSHHHHTSCCEEEECCSSSCCHHHHHHHHH
T ss_pred             HHh---hcCCccEEEECCcH-HHHHHHHHhhcCCCEEEEEecCCCCccCcchHHHHhcCeEEEEEeccccCHHHHHHHHH
Confidence            111   24579999999996 688999999999999999986543 3345555677899999997432       12455


Q ss_pred             HHHHHHHcCCCCCCCceEEEeeCChhhHHHHHHHHhcCCCceEEEEeC
Q 017916          317 LCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  364 (364)
Q Consensus       317 ~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  364 (364)
                      ++.+++++|++  ++.++++|+|  +++++|++.++++...||+|+++
T Consensus       287 ~~~~~~~~g~l--~~~i~~~~~l--~~~~~A~~~~~~~~~~gKvvi~~  330 (330)
T 1tt7_A          287 RMSSDLKPDQL--LTIVDREVSL--EETPGALKDILQNRIQGRVIVKL  330 (330)
T ss_dssp             HTTTTSCCSCS--TTSEEEEECS--TTHHHHHHHTTTTCCSSEEEECC
T ss_pred             HHHHHHhcCCc--ccccceEEcH--HHHHHHHHHHHcCCCCCeEEEeC
Confidence            66667777877  6788899999  99999999999998899999975

>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha}

Probab=100.00  E-value=5.1e-46  Score=346.98  Aligned_cols=310  Identities=18%  Similarity=0.203  Sum_probs=251.5

Q ss_pred             chhcceeEEEe-cCCceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhccc-------CC-----------------
Q 017916           14 GEEVNMAAWLL-GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRC-------AD-----------------   68 (364)
Q Consensus        14 ~~~~~~~~~~~-~~~~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~-------~~-----------------   68 (364)
                      .+..|++++.. ++..+++.+.|.|+++++||+|||+++++|++|++.+.|.+.       +.                 
T Consensus         4 ~~~~mka~v~~~~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~g~~~~p~~~~~~p~~~~~~   83 (379)
T 3iup_A            4 SALQLRSRIKSSGELELSLDSIDTPHPGPDEVLIRIEASPLNPSDLGLLFGAADMSTAKASGTAERPIVTARVPEGAMRS   83 (379)
T ss_dssp             EEEEEEEEECTTSEEEEEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHHTTCEEEEEEEEECSSSEEEEEECCHHHHHH
T ss_pred             chhhHHHHHhcCCCCceEEEeccCCCCCCCEEEEEEEEEecCHHHHHHhcCCccccccccccccccccccccCccccccc
Confidence            34567777764 557899999999999999999999999999999999887421       00                 


Q ss_pred             --ccCCCCcccccceeEEEEEeCCCC-CCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEec
Q 017916           69 --FVVKEPMVIGHECAGVIEKVGSEV-KTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHP  145 (364)
Q Consensus        69 --~~~~~p~~~G~e~~G~V~~vG~~v-~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~  145 (364)
                        ....+|.++|||++|+|+++|++| ++|++||+|++.                             .+|+|+||++++
T Consensus        84 ~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~vGdrV~~~-----------------------------~~G~~aey~~v~  134 (379)
T 3iup_A           84 MAGRLDASMPVGNEGAGVVVEAGSSPAAQALMGKTVAAI-----------------------------GGAMYSQYRCIP  134 (379)
T ss_dssp             HGGGTTEEEECCSCEEEEEEEECSSHHHHTTTTCEEEEC-----------------------------CSCCSBSEEEEE
T ss_pred             cccccCCCccceeeeEEEEEEeCCCcccCCCCCCEEEec-----------------------------CCCcceeEEEeC
Confidence              023578999999999999999999 899999999875                             349999999999


Q ss_pred             CCceEECCCCCCccchhhhh-hhHHHHHHHHHcCCCCCCEEEEEc-C-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHH
Q 017916          146 ADLCFKLPDNVSLEEGAMCE-PLSVGLHACRRANIGPETNVLIMG-A-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA  222 (364)
Q Consensus       146 ~~~~~~lP~~~~~~~aa~~~-~~~~a~~~l~~~~~~~g~~VLI~G-a-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~  222 (364)
                      +++++++|+++++++|+++. ...|||++++... ++|++|||+| + |++|++++|+|+.+|+ .|++++++++|.+++
T Consensus       135 ~~~~~~iP~~~~~~~aa~l~~~~~ta~~~~~~~~-~~g~~vlV~gag~G~vG~~a~q~a~~~Ga-~Vi~~~~~~~~~~~~  212 (379)
T 3iup_A          135 ADQCLVLPEGATPADGASSFVNPLTALGMVETMR-LEGHSALVHTAAASNLGQMLNQICLKDGI-KLVNIVRKQEQADLL  212 (379)
T ss_dssp             GGGEEECCTTCCHHHHTTSSHHHHHHHHHHHHHH-HTTCSCEEESSTTSHHHHHHHHHHHHHTC-CEEEEESSHHHHHHH
T ss_pred             HHHeEECCCCCCHHHHHhhhhhHHHHHHHHHHhc-cCCCEEEEECCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHH
Confidence            99999999999999998664 7778998887766 8999999994 4 9999999999999999 578888999999999


Q ss_pred             HHcCCCeEEecCCCcccHHHHHHHHHHHcCCCccEEEECCCCHHHHHHHHHhcc-----cC-----------CEEEEEcC
Q 017916          223 KELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATR-----AG-----------GKVCLVGM  286 (364)
Q Consensus       223 ~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~-----~~-----------G~~v~~g~  286 (364)
                      +++|+++++++..  +++.+.+++++.  +.++|++|||+|++.....++++|+     ++           |+++.+|.
T Consensus       213 ~~lGa~~~~~~~~--~~~~~~v~~~t~--~~g~d~v~d~~g~~~~~~~~~~~l~~~~~r~~G~~~~~G~~~~g~iv~~G~  288 (379)
T 3iup_A          213 KAQGAVHVCNAAS--PTFMQDLTEALV--STGATIAFDATGGGKLGGQILTCMEAALNKSAREYSRYGSTTHKQVYLYGG  288 (379)
T ss_dssp             HHTTCSCEEETTS--TTHHHHHHHHHH--HHCCCEEEESCEEESHHHHHHHHHHHHHHTTCCSCCTTCCCSCEEEEECCC
T ss_pred             HhCCCcEEEeCCC--hHHHHHHHHHhc--CCCceEEEECCCchhhHHHHHHhcchhhhccccceeecccccCceEEEecC
Confidence            9999999988653  688888887764  4579999999997777788888885     44           55555553


Q ss_pred             CCCCccccchhhhhcCcEEEeeccC-----------CCcHHHHHHHHHcCCCCCCCceEEEeeCChhhH--HHHHHHHhc
Q 017916          287 GHHEMTVPLTPAAVREVDVVGVFRY-----------KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEV--EEAFETSAR  353 (364)
Q Consensus       287 ~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~--~~a~~~~~~  353 (364)
                      .. .........+.+++++.+....           .+.++++++++.+ .+  ++.++++|+|  +++  ++|++.+++
T Consensus       289 ~~-~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l--~~~i~~~~~l--~~~~~~~A~~~l~~  362 (379)
T 3iup_A          289 LD-TSPTEFNRNFGMAWGMGGWLLFPFLQKIGRERANALKQRVVAELKT-TF--ASHYSKEISL--AEVLDLDMIAVYNK  362 (379)
T ss_dssp             SE-EEEEEECCCSCSCEEEEECCHHHHHHHHCHHHHHHHHHHHHHTTTT-TT--CCCCSEEEEH--HHHTCHHHHHHHTT
T ss_pred             CC-CCccccccccccceEEEEEEeeeecccCCHHHHHHHHHHHHHHHhc-cC--CCcceEEecH--HHhhhHHHHHHHhc
Confidence            22 1123334456788888886542           1334666666666 44  7788899999  999  999999999


Q ss_pred             CCCceEEEEeC
Q 017916          354 GGTAIKVMFNL  364 (364)
Q Consensus       354 ~~~~gkvvv~~  364 (364)
                      +...||+|+++
T Consensus       363 ~~~~gKvVv~~  373 (379)
T 3iup_A          363 RATGEKYLINP  373 (379)
T ss_dssp             CCTTCCEEEET
T ss_pred             CCCCceEEEeC
Confidence            99999999974

>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=4e-45  Score=335.05  Aligned_cols=308  Identities=20%  Similarity=0.231  Sum_probs=245.5

Q ss_pred             cceeEEEecCC---ceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCCCCC
Q 017916           17 VNMAAWLLGVN---TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVK   93 (364)
Q Consensus        17 ~~~~~~~~~~~---~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~   93 (364)
                      +|+++++.++.   .+++.+.|.|+++++||+|||.++++|++|++.+.|.+..  ...+|.++|||++|+|+++  +++
T Consensus         3 ~mka~~~~~~g~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~--~~~~p~v~G~E~~G~V~~~--~v~   78 (328)
T 1xa0_A            3 AFQAFVVNKTETEFTAGVQTISMDDLPEGDVLVRVHYSSVNYKDGLASIPDGKI--VKTYPFVPGIDLAGVVVSS--QHP   78 (328)
T ss_dssp             EEEEEEEEEETTEEEEEEEEEEGGGSCSCSEEEEEEEEECCHHHHHHTSGGGSS--CCSSSBCCCSEEEEEEEEC--CSS
T ss_pred             cceEEEEecCCCcceeEEEeccCCCCCCCeEEEEEEEEecCHHHHHhhcCCCCC--CCCCCcccCcceEEEEEec--CCC
Confidence            57888888654   7899999999999999999999999999999988875421  2457999999999999995  568


Q ss_pred             CCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCccchhhhh-hhHHHHH
Q 017916           94 TLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLH  172 (364)
Q Consensus        94 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~lP~~~~~~~aa~~~-~~~~a~~  172 (364)
                      +|++||||++.+..                     .+ ...+|+|+||+++++++++++|+++++++|++++ .+.|||.
T Consensus        79 ~~~vGdrV~~~~~~---------------------~g-~~~~G~~aey~~v~~~~~~~~P~~l~~~~aa~~~~~~~ta~~  136 (328)
T 1xa0_A           79 RFREGDEVIATGYE---------------------IG-VTHFGGYSEYARLHGEWLVPLPKGLTLKEAMAIGTAGFTAAL  136 (328)
T ss_dssp             SCCTTCEEEEESTT---------------------BT-TTBCCSSBSEEEECGGGCEECCTTCCHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEcccc---------------------CC-CCCCccceeEEEechHHeEECCCCCCHHHhhhhhhhHHHHHH
Confidence            89999999875210                     00 1346999999999999999999999999999876 6677887


Q ss_pred             HH---HHcCCCCCC-EEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHH
Q 017916          173 AC---RRANIGPET-NVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKI  247 (364)
Q Consensus       173 ~l---~~~~~~~g~-~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~  247 (364)
                      ++   ++.++++|+ +|||+|+ |++|++++|+|+.+|++ |+++++++++.++++++|+++++++.+.  + .+.++++
T Consensus       137 ~l~~~~~~~~~~g~~~VlV~Ga~G~vG~~~~q~a~~~Ga~-vi~~~~~~~~~~~~~~lGa~~~i~~~~~--~-~~~~~~~  212 (328)
T 1xa0_A          137 SIHRLEEHGLTPERGPVLVTGATGGVGSLAVSMLAKRGYT-VEASTGKAAEHDYLRVLGAKEVLAREDV--M-AERIRPL  212 (328)
T ss_dssp             HHHHHHHTTCCGGGCCEEESSTTSHHHHHHHHHHHHTTCC-EEEEESCTTCHHHHHHTTCSEEEECC------------C
T ss_pred             HHHHHhhcCCCCCCceEEEecCCCHHHHHHHHHHHHCCCE-EEEEECCHHHHHHHHHcCCcEEEecCCc--H-HHHHHHh
Confidence            66   457899997 9999998 99999999999999994 7888888999999999999998886532  1 2223222


Q ss_pred             HHHcCCCccEEEECCCCHHHHHHHHHhcccCCEEEEEcCCCC-CccccchhhhhcCcEEEeeccC-------CCcHHHHH
Q 017916          248 QKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHH-EMTVPLTPAAVREVDVVGVFRY-------KNTWPLCL  319 (364)
Q Consensus       248 ~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~  319 (364)
                         .+.++|++|||+|+ +.+..++++++++|+++.+|.... ...++...+..+++++.+....       .+.++++.
T Consensus       213 ---~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~  288 (328)
T 1xa0_A          213 ---DKQRWAAAVDPVGG-RTLATVLSRMRYGGAVAVSGLTGGAEVPTTVHPFILRGVSLLGIDSVYCPMDLRLRIWERLA  288 (328)
T ss_dssp             ---CSCCEEEEEECSTT-TTHHHHHHTEEEEEEEEECSCCSSSCCCCCSHHHHHTTCEEEECCSSSCCHHHHHHHHHHHH
T ss_pred             ---cCCcccEEEECCcH-HHHHHHHHhhccCCEEEEEeecCCCCCCCchhhhhhcCceEEEEecccCCHHHHHHHHHHHH
Confidence               24589999999996 688999999999999999986443 3344555677899999987432       12345556


Q ss_pred             HHHHcCCCCCCCceEEEeeCChhhHHHHHHHHhcCCCceEEEEeC
Q 017916          320 ELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  364 (364)
Q Consensus       320 ~~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  364 (364)
                      ++++++ +  ++ +.+.|+|  +++++|++.++++...||+|+++
T Consensus       289 ~~~~~g-l--~~-~~~~~~l--~~~~~A~~~~~~~~~~gKvvv~~  327 (328)
T 1xa0_A          289 GDLKPD-L--ER-IAQEISL--AELPQALKRILRGELRGRTVVRL  327 (328)
T ss_dssp             TTTCCC-H--HH-HEEEEEG--GGHHHHHHHHHHTCCCSEEEEEC
T ss_pred             HHHHcC-C--ce-eeeEeCH--HHHHHHHHHHHcCCCCCeEEEEe
Confidence            666666 5  44 4689999  99999999999998899999975

>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*

Probab=100.00  E-value=8.9e-44  Score=329.74  Aligned_cols=308  Identities=19%  Similarity=0.196  Sum_probs=253.2

Q ss_pred             hhcceeEEE-ecC--------CceEEEEecCCCC-CCCcEEEEEeeeeeCcccHhhhhhcc--cCCccCCCCccccccee
Q 017916           15 EEVNMAAWL-LGV--------NTLKIQPFELPSL-GPYDVLVRMKAVGICGSDVHYLKTLR--CADFVVKEPMVIGHECA   82 (364)
Q Consensus        15 ~~~~~~~~~-~~~--------~~~~~~~~~~p~~-~~~~VlV~v~~~~l~~~d~~~~~g~~--~~~~~~~~p~~~G~e~~   82 (364)
                      +.+|+++++ ..+        +.+++.+.|.|++ +++||+|||.++++|+.|+..+.+..  .......+|.++|||++
T Consensus         6 ~~~mka~v~~~~~~~~g~p~~~~l~~~~~~~P~~~~~~eVlVkv~a~gi~~~D~~~~~~~~g~~~~~~~~~p~v~G~E~~   85 (357)
T 2zb4_A            6 AMIVQRVVLNSRPGKNGNPVAENFRMEEVYLPDNINEGQVQVRTLYLSVDPYMRCRMNEDTGTDYITPWQLSQVVDGGGI   85 (357)
T ss_dssp             CCEEEEEEECCCCCTTSCCCGGGEEEEEEECCSCCCTTEEEEEEEEEECCTTHHHHTSSSCSSSSSCCCCBTSBCEEEEE
T ss_pred             cccceEEEEeccCCCCCCCCcCceEEEeecCCCCCCCCeEEEEEEEEecCHHHHhhccccccccccCCCCCCccccccEE
Confidence            345889888 333        6799999999998 99999999999999999988766421  01112467899999999


Q ss_pred             EEEEEeCCCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCC-----C
Q 017916           83 GVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNV-----S  157 (364)
Q Consensus        83 G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~lP~~~-----~  157 (364)
                      |+|++  ++|++|++||+|++.                              .|+|+||+++++++++++|+++     +
T Consensus        86 G~V~~--~~v~~~~vGdrV~~~------------------------------~G~~aey~~v~~~~~~~iP~~~~~~~~~  133 (357)
T 2zb4_A           86 GIIEE--SKHTNLTKGDFVTSF------------------------------YWPWQTKVILDGNSLEKVDPQLVDGHLS  133 (357)
T ss_dssp             EEEEE--ECSTTCCTTCEEEEE------------------------------EEESBSEEEEEGGGCEECCGGGGTTCGG
T ss_pred             EEEEe--cCCCCCCCCCEEEec------------------------------CCCcEEEEEEchHHceecCcccccCchh
Confidence            99999  889999999999864                              2899999999999999999999     6


Q ss_pred             ccchhhhhhhHHHHHHH-HHcCCCCC--CEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHH-cCCCeEEe
Q 017916          158 LEEGAMCEPLSVGLHAC-RRANIGPE--TNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKE-LGADNIVK  232 (364)
Q Consensus       158 ~~~aa~~~~~~~a~~~l-~~~~~~~g--~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~-lg~~~~~~  232 (364)
                      ++.|++..+++|||+++ +.+++++|  ++|||+|+ |++|++++|+|+..|++.|+++++++++.+.+++ +|++.+++
T Consensus       134 ~~~a~l~~~~~ta~~al~~~~~~~~g~~~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~~~~~~~g~~~~~d  213 (357)
T 2zb4_A          134 YFLGAIGMPGLTSLIGIQEKGHITAGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSELGFDAAIN  213 (357)
T ss_dssp             GGGTTTSHHHHHHHHHHHHHSCCCTTSCCEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTSCCSEEEE
T ss_pred             HHHHhcccHHHHHHHHHHHhcCCCCCCccEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcCCceEEe
Confidence            56455556899999999 67999999  99999998 9999999999999999668888888889888886 99998888


Q ss_pred             cCCCcccHHHHHHHHHHHcCCCccEEEECCCCHHHHHHHHHhcccCCEEEEEcCCCC-Cccccc---------hhhhhcC
Q 017916          233 VSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHH-EMTVPL---------TPAAVRE  302 (364)
Q Consensus       233 ~~~~~~~~~~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~---------~~~~~~~  302 (364)
                      +.+  +++.+.+++..   ++++|++|||+| ...+..++++|+++|+++.+|.... ....+.         ..+..++
T Consensus       214 ~~~--~~~~~~~~~~~---~~~~d~vi~~~G-~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~  287 (357)
T 2zb4_A          214 YKK--DNVAEQLRESC---PAGVDVYFDNVG-GNISDTVISQMNENSHIILCGQISQYNKDVPYPPPLSPAIEAIQKERN  287 (357)
T ss_dssp             TTT--SCHHHHHHHHC---TTCEEEEEESCC-HHHHHHHHHTEEEEEEEEECCCGGGTTSCCCSSCCCCHHHHHHHHHHT
T ss_pred             cCc--hHHHHHHHHhc---CCCCCEEEECCC-HHHHHHHHHHhccCcEEEEECCccccccCccccccchhhhhhhhhcce
Confidence            653  56766666553   338999999999 5888999999999999999985322 111221         3567889


Q ss_pred             cEEEeeccC------CCcHHHHHHHHHcCCCCCCCceEEEeeCChhhHHHHHHHHhcCCCceEEEEeC
Q 017916          303 VDVVGVFRY------KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  364 (364)
Q Consensus       303 ~~~~~~~~~------~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  364 (364)
                      +++.++...      .+.++++++++++|++  ++.+..+|+|  +++++|++.++++...||+|+++
T Consensus       288 ~~i~g~~~~~~~~~~~~~~~~~~~l~~~g~l--~~~~~~~~~l--~~~~~A~~~~~~~~~~gKvvi~~  351 (357)
T 2zb4_A          288 ITRERFLVLNYKDKFEPGILQLSQWFKEGKL--KIKETVINGL--ENMGAAFQSMMTGGNIGKQIVCI  351 (357)
T ss_dssp             CEEEECCGGGGGGGHHHHHHHHHHHHHTTCC--CCCEEEEECG--GGHHHHHHHHHTTCCSBEEEEEC
T ss_pred             eEEEEeehhhhhHHHHHHHHHHHHHHHcCCC--cCccceecCH--HHHHHHHHHHHcCCCCceEEEEE
Confidence            999987642      4568999999999999  4555567888  99999999999998899999974

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D

Probab=100.00  E-value=4.6e-43  Score=317.57  Aligned_cols=289  Identities=25%  Similarity=0.341  Sum_probs=239.9

Q ss_pred             ceeEEEecCC-ceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCCCCCCCC
Q 017916           18 NMAAWLLGVN-TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLV   96 (364)
Q Consensus        18 ~~~~~~~~~~-~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~   96 (364)
                      |+++++..+. ...+.+.|.|+++++||+|||+++++|++|++.+.|.+..  ...+|.++|||++|+|+          
T Consensus         1 Mka~~~~~~g~~~~l~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~--~~~~p~i~G~e~~G~V~----------   68 (302)
T 1iz0_A            1 MKAWVLKRLGGPLELVDLPEPEAEEGEVVLRVEAVGLNFADHLMRLGAYLT--RLHPPFIPGMEVVGVVE----------   68 (302)
T ss_dssp             CEEEEECSTTSCEEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHTCSSS--CCCSSBCCCCEEEEEET----------
T ss_pred             CeEEEEcCCCCchheEECCCCCCCCCEEEEEEEEEecCHHHHHHhCCCCCC--CCCCCCcccceEEEEEE----------
Confidence            5777777654 3346689999999999999999999999999999875432  13679999999999996          


Q ss_pred             CCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCccchhhhh-hhHHHHHHHH
Q 017916           97 PGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHACR  175 (364)
Q Consensus        97 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~lP~~~~~~~aa~~~-~~~~a~~~l~  175 (364)
                       ||+|++..                            .+|+|+||+++++++++++|+++++++||+++ ++.|||+++.
T Consensus        69 -GdrV~~~~----------------------------~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~  119 (302)
T 1iz0_A           69 -GRRYAALV----------------------------PQGGLAERVAVPKGALLPLPEGLSPEEAAAFPVSFLTAYLALK  119 (302)
T ss_dssp             -TEEEEEEC----------------------------SSCCSBSEEEEEGGGCEECCTTCCHHHHHTSHHHHHHHHHHHH
T ss_pred             -CcEEEEec----------------------------CCcceeeEEEEcHHHcEeCCCCCCHHHHHHhhhHHHHHHHHHH
Confidence             99998752                            45999999999999999999999999987665 8999999995


Q ss_pred             -HcCCCCCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcCC
Q 017916          176 -RANIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGT  253 (364)
Q Consensus       176 -~~~~~~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~  253 (364)
                       .+ +++|++|||+|+ |++|++++|+|+.+|+ .|+++++++++.++++++|++.++++... +++.+.+        .
T Consensus       120 ~~~-~~~g~~vlV~Ga~G~vG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~~ga~~~~~~~~~-~~~~~~~--------~  188 (302)
T 1iz0_A          120 RAQ-ARPGEKVLVQAAAGALGTAAVQVARAMGL-RVLAAASRPEKLALPLALGAEEAATYAEV-PERAKAW--------G  188 (302)
T ss_dssp             HTT-CCTTCEEEESSTTBHHHHHHHHHHHHTTC-EEEEEESSGGGSHHHHHTTCSEEEEGGGH-HHHHHHT--------T
T ss_pred             Hhc-CCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhcCCCEEEECCcc-hhHHHHh--------c
Confidence             57 999999999998 9999999999999999 78888889999999999999988875320 2332222        5


Q ss_pred             CccEEEECCCCHHHHHHHHHhcccCCEEEEEcCCCCC-ccccchhhhhcCcEEEeecc-----CCCcHHHHHH---HHHc
Q 017916          254 GIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHE-MTVPLTPAAVREVDVVGVFR-----YKNTWPLCLE---LLRS  324 (364)
Q Consensus       254 ~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~---~l~~  324 (364)
                      ++|++|| +|+ +.+..++++|+++|+++.+|..... ..++...++.+++++.+...     ..+.++++++   ++++
T Consensus       189 ~~d~vid-~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~  266 (302)
T 1iz0_A          189 GLDLVLE-VRG-KEVEESLGLLAHGGRLVYIGAAEGEVAPIPPLRLMRRNLAVLGFWLTPLLREGALVEEALGFLLPRLG  266 (302)
T ss_dssp             SEEEEEE-CSC-TTHHHHHTTEEEEEEEEEC-------CCCCTTHHHHTTCEEEECCHHHHTTCHHHHHHHHHHHGGGBT
T ss_pred             CceEEEE-CCH-HHHHHHHHhhccCCEEEEEeCCCCCCCCcCHHHHHhCCCeEEEEeccchhhhHHHHHHHHhhhHHHHc
Confidence            7999999 996 7889999999999999999864432 23455567789999999764     2456889999   9999


Q ss_pred             CCCCCCCceEEEeeCChhhHHHHHHHHhcCCCceEEEEeC
Q 017916          325 GKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  364 (364)
Q Consensus       325 g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  364 (364)
                      |++  ++.+.++|+|  +++++|++.++++...||+++++
T Consensus       267 g~l--~~~i~~~~~l--~~~~~A~~~~~~~~~~gKvvv~~  302 (302)
T 1iz0_A          267 REL--RPVVGPVFPF--AEAEAAFRALLDRGHTGKVVVRL  302 (302)
T ss_dssp             TTB--CCCEEEEEEG--GGHHHHHHHTTCTTCCBEEEEEC
T ss_pred             CCc--ccccceEEcH--HHHHHHHHHHHcCCCCceEEEeC
Confidence            998  6788899999  99999999999988899999874

>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*

Probab=100.00  E-value=1e-41  Score=314.52  Aligned_cols=299  Identities=17%  Similarity=0.156  Sum_probs=242.5

Q ss_pred             ecCC--ceEEE--EecCCC-CCCCcEEEEEeeeeeCcccHhhhhhcccCC-ccCCCCcccccceeEEEEE--eCCCCCCC
Q 017916           24 LGVN--TLKIQ--PFELPS-LGPYDVLVRMKAVGICGSDVHYLKTLRCAD-FVVKEPMVIGHECAGVIEK--VGSEVKTL   95 (364)
Q Consensus        24 ~~~~--~~~~~--~~~~p~-~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~-~~~~~p~~~G~e~~G~V~~--vG~~v~~~   95 (364)
                      .++.  .+++.  +.+.|. +++|||||||.++++|+.|. ...|.+... ....+|+++|||++|++++  +|+++++|
T Consensus        16 ~~p~~~~l~~~~~~~~~P~~~~~~eVlVkv~a~g~~~~~~-~~~g~~~~~~~~~~~p~v~G~e~~G~~~~GvV~~~v~~~   94 (345)
T 2j3h_A           16 GFPTESDFDFTTTTVELRVPEGTNSVLVKNLYLSCDPYMR-IRMGKPDPSTAALAQAYTPGQPIQGYGVSRIIESGHPDY   94 (345)
T ss_dssp             SSCCGGGEEEEEEEEECCSCSSSSCEEEEECEEECCTTHH-HHHBC---------CCCCTTSBCEEEEEEEEEEECSTTC
T ss_pred             CCCCccceeEEEeecCCCCCCCCCEEEEEEEEecCCHHHH-hhcccCCCCccccCCCcCCCCeeecceEEEEEecCCCCC
Confidence            3555  69998  888886 89999999999999999875 344432110 0024689999999999999  99999999


Q ss_pred             CCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCc--eEECCC---CCCccchhhhhhhHHH
Q 017916           96 VPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADL--CFKLPD---NVSLEEGAMCEPLSVG  170 (364)
Q Consensus        96 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~--~~~lP~---~~~~~~aa~~~~~~~a  170 (364)
                      ++||||++.                               |+|+||++++++.  ++++|+   +++++.|++..+++||
T Consensus        95 ~vGdrV~~~-------------------------------g~~aey~~v~~~~~~~~~ip~~~~~~~~~aa~l~~~~~ta  143 (345)
T 2j3h_A           95 KKGDLLWGI-------------------------------VAWEEYSVITPMTHAHFKIQHTDVPLSYYTGLLGMPGMTA  143 (345)
T ss_dssp             CTTCEEEEE-------------------------------EESBSEEEECCCTTTCEEECCCSSCTTGGGTTTSHHHHHH
T ss_pred             CCCCEEEee-------------------------------cCceeEEEecccccceeecCCCCCCHHHHHHhccccHHHH
Confidence            999999864                               8899999999876  999996   3565544444589999


Q ss_pred             HHHH-HHcCCCCCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHH-HcCCCeEEecCCCcccHHHHHHHH
Q 017916          171 LHAC-RRANIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAK-ELGADNIVKVSTNLQDIAEEVEKI  247 (364)
Q Consensus       171 ~~~l-~~~~~~~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~-~lg~~~~~~~~~~~~~~~~~i~~~  247 (364)
                      |+++ +.+++++|++|||+|+ |++|++++|+|+..|+ .|+++++++++.+.++ ++|++.++++.+. .++.+.+++.
T Consensus       144 ~~al~~~~~~~~g~~vlI~Ga~g~iG~~~~~~a~~~G~-~V~~~~~~~~~~~~~~~~~g~~~~~d~~~~-~~~~~~~~~~  221 (345)
T 2j3h_A          144 YAGFYEVCSPKEGETVYVSAASGAVGQLVGQLAKMMGC-YVVGSAGSKEKVDLLKTKFGFDDAFNYKEE-SDLTAALKRC  221 (345)
T ss_dssp             HHHHHTTSCCCTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHTSCCSEEEETTSC-SCSHHHHHHH
T ss_pred             HHHHHHHhCCCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHcCCceEEecCCH-HHHHHHHHHH
Confidence            9999 5689999999999997 9999999999999999 6888888999999998 7999988886432 3666666654


Q ss_pred             HHHcCCCccEEEECCCCHHHHHHHHHhcccCCEEEEEcCCCC------CccccchhhhhcCcEEEeeccCC------CcH
Q 017916          248 QKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHH------EMTVPLTPAAVREVDVVGVFRYK------NTW  315 (364)
Q Consensus       248 ~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~------~~~~~~~~~~~~~~~~~~~~~~~------~~~  315 (364)
                      .   ++++|++||++|+ ..+..++++|+++|+++.+|....      ...++...+..+++++.+.....      +.+
T Consensus       222 ~---~~~~d~vi~~~g~-~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~  297 (345)
T 2j3h_A          222 F---PNGIDIYFENVGG-KMLDAVLVNMNMHGRIAVCGMISQYNLENQEGVHNLSNIIYKRNRIQGFVVSDFYDKYSKFL  297 (345)
T ss_dssp             C---TTCEEEEEESSCH-HHHHHHHTTEEEEEEEEECCCGGGTTCSSCCCBSCTTHHHHHTCEEEECCGGGGGGGHHHHH
T ss_pred             h---CCCCcEEEECCCH-HHHHHHHHHHhcCCEEEEEccccccccCCccccccHHHHhhhceeeceeeehhhhhhHHHHH
Confidence            3   4689999999995 788999999999999999985322      23345566788999999876531      238


Q ss_pred             HHHHHHHHcCCCCCCCceEEEeeCChhhHHHHHHHHhcCCCceEEEEeC
Q 017916          316 PLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  364 (364)
Q Consensus       316 ~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  364 (364)
                      +++++++++|++  ++.+.+.|+|  +++++|++.++++...||+|+++
T Consensus       298 ~~~~~l~~~g~i--~~~~~~~~~l--~~~~~A~~~~~~~~~~gKvvv~~  342 (345)
T 2j3h_A          298 EFVLPHIREGKI--TYVEDVADGL--EKAPEALVGLFHGKNVGKQVVVV  342 (345)
T ss_dssp             HHHHHHHHTTSS--CCCEEEEESG--GGSHHHHHHHHTTCCSSEEEEES
T ss_pred             HHHHHHHHCCCC--cCcccccCCH--HHHHHHHHHHHcCCCceEEEEEe
Confidence            899999999998  5677778999  99999999999999999999874

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=100.00  E-value=3e-43  Score=354.51  Aligned_cols=291  Identities=20%  Similarity=0.282  Sum_probs=244.3

Q ss_pred             CCceEEEEecC--CCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCCCCCCCCCCCEEEE
Q 017916           26 VNTLKIQPFEL--PSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVAL  103 (364)
Q Consensus        26 ~~~~~~~~~~~--p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~  103 (364)
                      ++.+++.+.+.  |+++++||+|||+++|||++|+.++.|.+      ..|.++|||++|+|+++|++|++|++||||++
T Consensus       221 ~~~L~~~~~~~p~~~~~~~eVlV~V~a~gin~~D~~~~~G~~------~~~~~lG~E~aG~V~~vG~~V~~~~vGDrV~~  294 (795)
T 3slk_A          221 LDGLALVDEPTATAPLGDGEVRIAMRAAGVNFRDALIALGMY------PGVASLGSEGAGVVVETGPGVTGLAPGDRVMG  294 (795)
T ss_dssp             STTEEECCCHHHHSCCCSSEEEEEEEEEEECHHHHHHTTTCC------SSCCCSCCCEEEEEEEECSSCCSSCTTCEEEE
T ss_pred             ccceEEEeCCccCCCCCCCEEEEEEEEEccCHHHHHHHcCCC------CCCccccceeEEEEEEeCCCCCcCCCCCEEEE
Confidence            47888888774  56899999999999999999999988754      34568999999999999999999999999987


Q ss_pred             cCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCccchhhhh-hhHHHHHHH-HHcCCCC
Q 017916          104 EPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHAC-RRANIGP  181 (364)
Q Consensus       104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~lP~~~~~~~aa~~~-~~~~a~~~l-~~~~~~~  181 (364)
                      .                             ..|+|+||+++++++++++|+++++++||+++ .+.|||+++ +.+++++
T Consensus       295 ~-----------------------------~~G~~ae~~~v~~~~~~~iP~~ls~~~AA~l~~~~~Ta~~al~~~a~l~~  345 (795)
T 3slk_A          295 M-----------------------------IPKAFGPLAVADHRMVTRIPAGWSFARAASVPIVFLTAYYALVDLAGLRP  345 (795)
T ss_dssp             C-----------------------------CSSCSSSEEEEETTSEEECCTTCCHHHHHHHHHHHHHHHCCCCCCTCCCT
T ss_pred             E-----------------------------ecCCCcCEEEeehHHEEECCCCCCHHHHHhhhHHHHHHHHHHHHHhCCCC
Confidence            5                             35999999999999999999999999999887 789999998 5689999


Q ss_pred             CCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcCCCccEEEE
Q 017916          182 ETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  260 (364)
Q Consensus       182 g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid  260 (364)
                      |++|||+|+ |++|++++|+||.+|++ |+++..++ |.++++ +|+++++++.  ..++.+.+++.+  .+.++|+|||
T Consensus       346 G~~VLI~gaaGgvG~~aiqlAk~~Ga~-V~~t~~~~-k~~~l~-lga~~v~~~~--~~~~~~~i~~~t--~g~GvDvVld  418 (795)
T 3slk_A          346 GESLLVHSAAGGVGMAAIQLARHLGAE-VYATASED-KWQAVE-LSREHLASSR--TCDFEQQFLGAT--GGRGVDVVLN  418 (795)
T ss_dssp             TCCEEEESTTBHHHHHHHHHHHHTTCC-EEEECCGG-GGGGSC-SCGGGEECSS--SSTHHHHHHHHS--CSSCCSEEEE
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHcCCE-EEEEeChH-Hhhhhh-cChhheeecC--ChhHHHHHHHHc--CCCCeEEEEE
Confidence            999999997 99999999999999995 66666544 666655 8999888754  468888887664  4679999999


Q ss_pred             CCCCHHHHHHHHHhcccCCEEEEEcCCCCCccccchhhhhcCcEEEeeccC-------CCcHHHHHHHHHcCCCCCCCce
Q 017916          261 CAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY-------KNTWPLCLELLRSGKIDVKPLV  333 (364)
Q Consensus       261 ~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~l~~g~~~~~~~~  333 (364)
                      ++| .+.+..++++|+++|+++.+|........... ...+++++.+....       .+.++++++++++|++  ++.+
T Consensus       419 ~~g-g~~~~~~l~~l~~~Gr~v~iG~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~l~~~g~l--~p~~  494 (795)
T 3slk_A          419 SLA-GEFADASLRMLPRGGRFLELGKTDVRDPVEVA-DAHPGVSYQAFDTVEAGPQRIGEMLHELVELFEGRVL--EPLP  494 (795)
T ss_dssp             CCC-TTTTHHHHTSCTTCEEEEECCSTTCCCHHHHH-HHSSSEEEEECCGGGGHHHHHHHHHHHHHHHHHTTSC--CCCC
T ss_pred             CCC-cHHHHHHHHHhcCCCEEEEeccccccCccccc-ccCCCCEEEEeeccccCHHHHHHHHHHHHHHHHcCCc--CCCc
Confidence            999 47889999999999999999864432222211 22366666665432       4568899999999998  6678


Q ss_pred             EEEeeCChhhHHHHHHHHhcCCCceEEEEeC
Q 017916          334 THRFGFSQKEVEEAFETSARGGTAIKVMFNL  364 (364)
Q Consensus       334 ~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  364 (364)
                      .++|++  +++++||+.+++++..||+|+++
T Consensus       495 ~~~~~l--~~~~eA~~~l~~g~~~GKvVl~~  523 (795)
T 3slk_A          495 VTAWDV--RQAPEALRHLSQARHVGKLVLTM  523 (795)
T ss_dssp             EEEEEG--GGHHHHHHHHHHTCCCBEEEEEC
T ss_pred             ceeEcH--HHHHHHHHHHhcCCccceEEEec
Confidence            899999  99999999999999999999974

>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*

Probab=100.00  E-value=1.3e-40  Score=305.59  Aligned_cols=298  Identities=18%  Similarity=0.201  Sum_probs=244.0

Q ss_pred             cceeEEEec-------CCceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeC
Q 017916           17 VNMAAWLLG-------VNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVG   89 (364)
Q Consensus        17 ~~~~~~~~~-------~~~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG   89 (364)
                      +|+++++..       ++.+++.+.|.|+++++||+|||+++++|+.|+.+ .    .  ...+|.++|+|++|+|++. 
T Consensus         7 ~mka~~~~~~~~g~~~~~~l~~~e~~~P~~~~~eVlVkv~a~gi~~~~~~~-~----~--~~~~p~~~g~e~~G~Vv~~-   78 (333)
T 1v3u_A            7 KAKSWTLKKHFQGKPTQSDFELKTVELPPLKNGEVLLEALFLSVDPYMRIA-S----K--RLKEGAVMMGQQVARVVES-   78 (333)
T ss_dssp             EEEEEEECC-----CCGGGEEEEEEECCCCCTTCEEEEEEEEECCTHHHHH-T----T--TCCTTSBCCCCEEEEEEEE-
T ss_pred             cccEEEEeecCCCCCCccceEEEeCCCCCCCCCEEEEEEEEeccCHHHccc-c----C--cCCCCcccccceEEEEEec-
Confidence            477887764       36799999999999999999999999999988732 1    1  2356889999999999985 


Q ss_pred             CCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCC----CCccch-h-h
Q 017916           90 SEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDN----VSLEEG-A-M  163 (364)
Q Consensus        90 ~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~lP~~----~~~~~a-a-~  163 (364)
                       ++++|++||||++.                               |+|+||+++++++++++|++    ++++++ + +
T Consensus        79 -~v~~~~vGdrV~~~-------------------------------g~~aey~~v~~~~~~~iP~~~~~~~~~~~a~a~l  126 (333)
T 1v3u_A           79 -KNSAFPAGSIVLAQ-------------------------------SGWTTHFISDGKGLEKLLTEWPDKLPLSLALGTI  126 (333)
T ss_dssp             -SCTTSCTTCEEEEC-------------------------------CCSBSEEEESSTTEEECC--CCTTSCGGGGGTTT
T ss_pred             -CCCCCCCCCEEEec-------------------------------CceEEEEEechHHeEEcCcccccCCCHHHHHHHh
Confidence             57899999999864                               88999999999999999997    777763 4 4


Q ss_pred             hhhhHHHHHHH-HHcCCCCCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHH
Q 017916          164 CEPLSVGLHAC-RRANIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIA  241 (364)
Q Consensus       164 ~~~~~~a~~~l-~~~~~~~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~  241 (364)
                      ..+++|||+++ +.+++++|++|||+|+ |++|++++|+++..|+ .|++++.++++.+.++++|++.++++.+ .+++.
T Consensus       127 ~~~~~ta~~al~~~~~~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~-~V~~~~~~~~~~~~~~~~g~~~~~d~~~-~~~~~  204 (333)
T 1v3u_A          127 GMPGLTAYFGLLEVCGVKGGETVLVSAAAGAVGSVVGQIAKLKGC-KVVGAAGSDEKIAYLKQIGFDAAFNYKT-VNSLE  204 (333)
T ss_dssp             SHHHHHHHHHHHTTSCCCSSCEEEEESTTBHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHTTCSEEEETTS-CSCHH
T ss_pred             CChHHHHHHHHHHhhCCCCCCEEEEecCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhcCCcEEEecCC-HHHHH
Confidence            45899999999 5689999999999998 9999999999999999 6888888999999899999988887643 15666


Q ss_pred             HHHHHHHHHcCCCccEEEECCCCHHHHHHHHHhcccCCEEEEEcCCCC------Cc-cccchhhhhcCcEEEeeccC---
Q 017916          242 EEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHH------EM-TVPLTPAAVREVDVVGVFRY---  311 (364)
Q Consensus       242 ~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~------~~-~~~~~~~~~~~~~~~~~~~~---  311 (364)
                      +.+++..   ++++|++||++| ...+..++++|+++|+++.+|....      .. ..+...++.+++++.+....   
T Consensus       205 ~~~~~~~---~~~~d~vi~~~g-~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~  280 (333)
T 1v3u_A          205 EALKKAS---PDGYDCYFDNVG-GEFLNTVLSQMKDFGKIAICGAISVYNRMDQLPPGPSPESIIYKQLRIEGFIVYRWQ  280 (333)
T ss_dssp             HHHHHHC---TTCEEEEEESSC-HHHHHHHHTTEEEEEEEEECCCCC-------CCBCCCHHHHHHTTCEEEECCGGGCC
T ss_pred             HHHHHHh---CCCCeEEEECCC-hHHHHHHHHHHhcCCEEEEEeccccccCCCCCCCCcCHHHHhhcCceEEEEehhhcc
Confidence            6666553   358999999999 5678999999999999999985432      11 12445678899999997653   


Q ss_pred             ----CCcHHHHHHHHHcCCCCCCCceEEEeeCChhhHHHHHHHHhcCCCceEEEEeC
Q 017916          312 ----KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  364 (364)
Q Consensus       312 ----~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  364 (364)
                          .+.++++++++++|++  ++.+...|+|  +++++|++.++++...||+|+++
T Consensus       281 ~~~~~~~~~~~~~l~~~g~l--~~~~~~~~~l--~~~~~A~~~~~~~~~~gKvvl~~  333 (333)
T 1v3u_A          281 GDVREKALRDLMKWVLEGKI--QYHEHVTKGF--ENMPAAFIEMLNGANLGKAVVTA  333 (333)
T ss_dssp             THHHHHHHHHHHHHHHTTSS--CCCEEEEECG--GGHHHHHHHHHTTCCSBEEEEEC
T ss_pred             hHHHHHHHHHHHHHHHCCCc--cCccccccCH--HHHHHHHHHHHcCCCCceEEEeC
Confidence                3457789999999998  4455556788  99999999999998899999975

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*

Probab=100.00  E-value=5.9e-32  Score=298.52  Aligned_cols=290  Identities=20%  Similarity=0.233  Sum_probs=231.3

Q ss_pred             CceEEEEecCCC-C--CCCcEEEEEeeeeeCcccHhhhhhcccCCc----cCCCCcccccceeEEEEEeCCCCCCCCCCC
Q 017916           27 NTLKIQPFELPS-L--GPYDVLVRMKAVGICGSDVHYLKTLRCADF----VVKEPMVIGHECAGVIEKVGSEVKTLVPGD   99 (364)
Q Consensus        27 ~~~~~~~~~~p~-~--~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~----~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd   99 (364)
                      +.+.+.+.+... +  .++||+|||.++|+|+.|+.+..|.+....    ....|.++|+|++|+|          ++||
T Consensus      1542 ~sl~~~~~~~~~~~~l~~~eVlVkV~aaglN~~Dv~~~~G~~~~~~~p~~~~~~~~~lG~E~aG~V----------~vGd 1611 (2512)
T 2vz8_A         1542 SSIRWVCSPLHYALPASCQDRLCSVYYTSLNFRDVMLATGKLSPDSIPGKWLTRDCMLGMEFSGRD----------ASGR 1611 (2512)
T ss_dssp             TSEEEEECTTTTCCCHHHHTTEEEEEEEECCHHHHHHHHTSSCGGGCCSCCSCSSSCCCCEEEEEE----------TTSC
T ss_pred             CceEEEecCcccccCCCCCceEEEEEecccCHHHHHHHhCCCccccccccccccCCceEEEEEEEE----------ccCC
Confidence            467777666443 3  379999999999999999999988653211    1234678999999988          3799


Q ss_pred             EEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCccchhhhh-hhHHHHHHH-HHc
Q 017916          100 RVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHAC-RRA  177 (364)
Q Consensus       100 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~lP~~~~~~~aa~~~-~~~~a~~~l-~~~  177 (364)
                      +|+++                            ...|+|+||+++++++++++|+++++++||+++ .++|||+++ +.+
T Consensus      1612 rV~g~----------------------------~~~G~~Aeyv~vp~~~v~~iPd~ls~~eAA~lp~~~~TA~~al~~~a 1663 (2512)
T 2vz8_A         1612 RVMGM----------------------------VPAEGLATSVLLLQHATWEVPSTWTLEEAASVPIVYTTAYYSLVVRG 1663 (2512)
T ss_dssp             CEEEE----------------------------CSSCCSBSEEECCGGGEEECCTTSCHHHHTTSHHHHHHHHHHHTTTT
T ss_pred             EEEEe----------------------------ecCCceeeEEEcccceEEEeCCCCCHHHHHHhHHHHHHHHHHHHHHh
Confidence            99976                            235899999999999999999999999999887 889999999 568


Q ss_pred             CCCCCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHH----cCCCeEEecCCCcccHHHHHHHHHHHcC
Q 017916          178 NIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKE----LGADNIVKVSTNLQDIAEEVEKIQKAMG  252 (364)
Q Consensus       178 ~~~~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~i~~~~~~~~  252 (364)
                      ++++|++|||+|+ |++|++++|+|+++|+ .|++++.+++|.+++++    +|+++++++.  ..++.+.+++.+  .+
T Consensus      1664 ~l~~Ge~VLI~gaaGgVG~aAiqlAk~~Ga-~Viat~~s~~k~~~l~~~~~~lga~~v~~~~--~~~~~~~i~~~t--~g 1738 (2512)
T 2vz8_A         1664 RMQPGESVLIHSGSGGVGQAAIAIALSRGC-RVFTTVGSAEKRAYLQARFPQLDETCFANSR--DTSFEQHVLRHT--AG 1738 (2512)
T ss_dssp             CCCTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHCTTCCSTTEEESS--SSHHHHHHHHTT--TS
T ss_pred             cCCCCCEEEEEeCChHHHHHHHHHHHHcCC-EEEEEeCChhhhHHHHhhcCCCCceEEecCC--CHHHHHHHHHhc--CC
Confidence            9999999999987 9999999999999999 67788888999998886    7888888754  357777776543  36


Q ss_pred             CCccEEEECCCCHHHHHHHHHhcccCCEEEEEcCCCCC-ccccchhhhhcCcEEEeeccC------CCcHHHHHHHH---
Q 017916          253 TGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHE-MTVPLTPAAVREVDVVGVFRY------KNTWPLCLELL---  322 (364)
Q Consensus       253 ~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~l---  322 (364)
                      .++|+||||++ ++.+..++++|+++|+++.+|..... ..........+++++.+....      ...++++++++   
T Consensus      1739 ~GvDvVld~~g-~~~l~~~l~~L~~~Gr~V~iG~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~l~~l~~~ 1817 (2512)
T 2vz8_A         1739 KGVDLVLNSLA-EEKLQASVRCLAQHGRFLEIGKFDLSNNHALGMAVFLKNVTFHGILLDSLFEEGGATWQEVSELLKAG 1817 (2512)
T ss_dssp             CCEEEEEECCC-HHHHHHHHTTEEEEEEEEECCCHHHHTTCEEEGGGGGGCCEEEECCGGGTTSSCCHHHHHHHHHHHHH
T ss_pred             CCceEEEECCC-chHHHHHHHhcCCCcEEEEeecccccccCcccccccccCCcEEEeeHHHHhhhCHHHHHHHHHHHHHH
Confidence            78999999998 78899999999999999999842111 111123355688888886542      23455555554   


Q ss_pred             -HcCCCCCCCceEEEeeCChhhHHHHHHHHhcCCCceEEEEeC
Q 017916          323 -RSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL  364 (364)
Q Consensus       323 -~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  364 (364)
                       .+|.+  ++.+.++|++  +++++|++.+.+++..||+|+++
T Consensus      1818 ~~~g~l--~p~i~~~f~l--~ei~eA~~~l~~g~~~GKvVi~~ 1856 (2512)
T 2vz8_A         1818 IQEGVV--QPLKCTVFPR--TKVEAAFRYMAQGKHIGKVVIQV 1856 (2512)
T ss_dssp             HTTTCS--CCCCEEEEES--STHHHHHHHHHTTCCSSEEEEEC
T ss_pred             HHcCCc--CCCcceEecH--HHHHHHHHhhhccCccceEEEEC
Confidence             46766  6778899999  99999999999999999999874

>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1

Probab=99.84  E-value=1.7e-20  Score=158.69  Aligned_cols=176  Identities=22%  Similarity=0.354  Sum_probs=128.8

Q ss_pred             CceEECCCCCCccchhhhh-hhHHHHHHHH-HcCCCCCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHH
Q 017916          147 DLCFKLPDNVSLEEGAMCE-PLSVGLHACR-RANIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAK  223 (364)
Q Consensus       147 ~~~~~lP~~~~~~~aa~~~-~~~~a~~~l~-~~~~~~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~  223 (364)
                      ++++++|+++++++|++++ ++.|||+++. .+++++|++|||+|+ |++|++++|+++..|+ .|+++++++++.+.++
T Consensus         2 ~~~~~~P~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~-~V~~~~~~~~~~~~~~   80 (198)
T 1pqw_A            2 DLVVPIPDTLADNEAATFGVAYLTAWHSLCEVGRLSPGERVLIHSATGGVGMAAVSIAKMIGA-RIYTTAGSDAKREMLS   80 (198)
T ss_dssp             ------------CHHHHHHHHHHHHHHHHHTTSCCCTTCEEEETTTTSHHHHHHHHHHHHHTC-EEEEEESSHHHHHHHH
T ss_pred             CceeECCCCCCHHHHHHhhHHHHHHHHHHHHHhCCCCCCEEEEeeCCChHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHH
Confidence            5688999999999999885 8999999995 588999999999996 9999999999999999 6888888888888889


Q ss_pred             HcCCCeEEecCCCcccHHHHHHHHHHHcCCCccEEEECCCCHHHHHHHHHhcccCCEEEEEcCCCC--Cccccchhhhhc
Q 017916          224 ELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHH--EMTVPLTPAAVR  301 (364)
Q Consensus       224 ~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~--~~~~~~~~~~~~  301 (364)
                      ++|++.++++..  +++.+.+.+..  .+.++|++||++| .+.+..++++|+++|+++.+|....  ...++.. ...+
T Consensus        81 ~~g~~~~~d~~~--~~~~~~~~~~~--~~~~~D~vi~~~g-~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~-~~~~  154 (198)
T 1pqw_A           81 RLGVEYVGDSRS--VDFADEILELT--DGYGVDVVLNSLA-GEAIQRGVQILAPGGRFIELGKKDVYADASLGLA-ALAK  154 (198)
T ss_dssp             TTCCSEEEETTC--STHHHHHHHHT--TTCCEEEEEECCC-THHHHHHHHTEEEEEEEEECSCGGGTTTCEEEGG-GGTT
T ss_pred             HcCCCEEeeCCc--HHHHHHHHHHh--CCCCCeEEEECCc-hHHHHHHHHHhccCCEEEEEcCCCCcCcCcCChh-HhcC
Confidence            999988777543  45555555443  2457999999998 5788999999999999999985431  1122222 3457


Q ss_pred             CcEEEeecc------C----CCcHHHHHHHHHcCCCCC
Q 017916          302 EVDVVGVFR------Y----KNTWPLCLELLRSGKIDV  329 (364)
Q Consensus       302 ~~~~~~~~~------~----~~~~~~~~~~l~~g~~~~  329 (364)
                      ++++.+...      .    .+.++++++++++|++.+
T Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~  192 (198)
T 1pqw_A          155 SASFSVVDLDLNLKLQPARYRQLLQHILQHVADGKLEV  192 (198)
T ss_dssp             TCEEEECCHHHHHHHCHHHHHHHHHHHHHHHHTTSSCC
T ss_pred             CcEEEEEehHHhhccCHHHHHHHHHHHHHHHHcCCccC
Confidence            788775321      1    456889999999999943

>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}

Probab=99.07  E-value=2.7e-10  Score=99.06  Aligned_cols=168  Identities=11%  Similarity=0.082  Sum_probs=109.5

Q ss_pred             CCCCCEEEEcC-------CcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCc------cch
Q 017916           95 LVPGDRVALEP-------GISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSL------EEG  161 (364)
Q Consensus        95 ~~~Gd~V~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~lP~~~~~------~~a  161 (364)
                      +++||+|++.+       ...|..|.+|..+..++|+..+.     ..|...      +..+++.|+....      ..+
T Consensus         4 ~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~G~~~~~~~~g~-----~~G~~~------~~~~~~~p~~~~~~~~~~~~~~   72 (248)
T 2yvl_A            4 FKEGEYVLIRFGEKKFLRKLLPKQSLSVKKSVLKFDEVIGK-----PEGVKI------NGFEVYRPTLEEIILLGFERKT   72 (248)
T ss_dssp             CCTTCEEEEEETTEEEEEECCTTCEEEETTEEEEGGGTTTC-----CTTEEE------TTEEEECCCHHHHHHHTSCCSS
T ss_pred             CCCCCEEEEEeCCeEEEEEEcCCCEEecCCceEEHHHhcCC-----CCCCEE------EEEEEeCCCHHHHHHhcCcCCC
Confidence            89999999987       56778888888777777764321     123222      3344444432211      112


Q ss_pred             hhhhhhHHHHHHHHHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHc----CC-CeEEecCCC
Q 017916          162 AMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKEL----GA-DNIVKVSTN  236 (364)
Q Consensus       162 a~~~~~~~a~~~l~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~l----g~-~~~~~~~~~  236 (364)
                      +.+.+.. +.+.+....++++++||..|+| .|..++.+++. +. .+++++.+++..+.+++.    +. ..+..... 
T Consensus        73 ~~~~~~~-~~~~~~~~~~~~~~~vldiG~G-~G~~~~~l~~~-~~-~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~-  147 (248)
T 2yvl_A           73 QIIYPKD-SFYIALKLNLNKEKRVLEFGTG-SGALLAVLSEV-AG-EVWTFEAVEEFYKTAQKNLKKFNLGKNVKFFNV-  147 (248)
T ss_dssp             CCCCHHH-HHHHHHHTTCCTTCEEEEECCT-TSHHHHHHHHH-SS-EEEEECSCHHHHHHHHHHHHHTTCCTTEEEECS-
T ss_pred             Ccccchh-HHHHHHhcCCCCCCEEEEeCCC-ccHHHHHHHHh-CC-EEEEEecCHHHHHHHHHHHHHcCCCCcEEEEEc-
Confidence            2222322 3355677888999999999988 58889999988 55 899999999888777653    43 22211111 


Q ss_pred             cccHHHHHHHHHHHcCCCccEEEECCCCH-HHHHHHHHhcccCCEEEEEc
Q 017916          237 LQDIAEEVEKIQKAMGTGIDVSFDCAGFN-KTMSTALSATRAGGKVCLVG  285 (364)
Q Consensus       237 ~~~~~~~i~~~~~~~~~~~d~vid~~g~~-~~~~~~~~~l~~~G~~v~~g  285 (364)
                        ++.+    .. ....++|+|+...+.+ ..+..+.+.|+++|+++...
T Consensus       148 --d~~~----~~-~~~~~~D~v~~~~~~~~~~l~~~~~~L~~gG~l~~~~  190 (248)
T 2yvl_A          148 --DFKD----AE-VPEGIFHAAFVDVREPWHYLEKVHKSLMEGAPVGFLL  190 (248)
T ss_dssp             --CTTT----SC-CCTTCBSEEEECSSCGGGGHHHHHHHBCTTCEEEEEE
T ss_pred             --Chhh----cc-cCCCcccEEEECCcCHHHHHHHHHHHcCCCCEEEEEe
Confidence              1111    00 0135799999887765 78889999999999999874

>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1

Probab=98.93  E-value=9.2e-12  Score=116.23  Aligned_cols=181  Identities=15%  Similarity=0.230  Sum_probs=129.0

Q ss_pred             cccccceeEEEEEeCCCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCC
Q 017916           75 MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPD  154 (364)
Q Consensus        75 ~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~lP~  154 (364)
                      ...|++.++.|..+|.+++++.+|+.++.-.-..                   .+......|++++|+..+...++.+|+
T Consensus        75 ~~~g~~a~~~i~~v~~Glds~~vGe~~Il~qvk~-------------------~~~~~~~~G~~~~~~~~~~~~a~~~~k  135 (404)
T 1gpj_A           75 VKRGSEAVRHLFRVASGLESMMVGEQEILRQVKK-------------------AYDRAARLGTLDEALKIVFRRAINLGK  135 (404)
T ss_dssp             EEEHHHHHHHHHHHHTTTTSSSTTCHHHHHHHHH-------------------HHHHHHHHTCCCHHHHHHHHHHHHHHH
T ss_pred             eecCchHhhhheeeccCCCCCcCCcchhHHHHHH-------------------HHHHHHHcCCchHHHHHHHHHHhhhhc
Confidence            4678899999999999999999999873210000                   000001236788888888888899998


Q ss_pred             CCCccchhhhhhhHHHHHHHHHcC----CCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHH-HHHHHcCCCe
Q 017916          155 NVSLEEGAMCEPLSVGLHACRRAN----IGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRL-SVAKELGADN  229 (364)
Q Consensus       155 ~~~~~~aa~~~~~~~a~~~l~~~~----~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~-~~~~~lg~~~  229 (364)
                      +++.+.++...++.++|.+++.+.    -.+|++|+|.|+|.+|.++++.++.+|++.|++++++.++. ++++++|++ 
T Consensus       136 ~v~~~~~~~~~~~s~a~~av~~a~~~~~~l~g~~VlIiGaG~iG~~~a~~l~~~G~~~V~v~~r~~~ra~~la~~~g~~-  214 (404)
T 1gpj_A          136 RAREETRISEGAVSIGSAAVELAERELGSLHDKTVLVVGAGEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLGGE-  214 (404)
T ss_dssp             HHHHHSSTTCSCCSHHHHHHHHHHHHHSCCTTCEEEEESCCHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHTCE-
T ss_pred             cCcchhhhcCCCccHHHHHHHHHHHHhccccCCEEEEEChHHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCc-
Confidence            888777666567778888774422    25899999999999999999999999997889998888886 678888875 


Q ss_pred             EEecCCCcccHHHHHHHHHHHcCCCccEEEECCCCHHHHH--HHHHh--c--ccCCEEEEEcCC
Q 017916          230 IVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMS--TALSA--T--RAGGKVCLVGMG  287 (364)
Q Consensus       230 ~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid~~g~~~~~~--~~~~~--l--~~~G~~v~~g~~  287 (364)
                      ++++    .++.+    ..    .++|+||+|++.+..+.  ..+..  +  ++++.++.++..
T Consensus       215 ~~~~----~~l~~----~l----~~aDvVi~at~~~~~~~~~~~l~~~~lk~r~~~~~v~vdia  266 (404)
T 1gpj_A          215 AVRF----DELVD----HL----ARSDVVVSATAAPHPVIHVDDVREALRKRDRRSPILIIDIA  266 (404)
T ss_dssp             ECCG----GGHHH----HH----HTCSEEEECCSSSSCCBCHHHHHHHHHHCSSCCCEEEEECC
T ss_pred             eecH----HhHHH----Hh----cCCCEEEEccCCCCceecHHHHHHHHHhccCCCCEEEEEcc
Confidence            3322    23322    21    36899999998654321  34554  3  567777777654

>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A

Probab=98.83  E-value=8.1e-09  Score=94.84  Aligned_cols=133  Identities=22%  Similarity=0.268  Sum_probs=95.3

Q ss_pred             CCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCe--EEecCCCcccHHHHHHHHHHHcCCCccEEE
Q 017916          182 ETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADN--IVKVSTNLQDIAEEVEKIQKAMGTGIDVSF  259 (364)
Q Consensus       182 g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~--~~~~~~~~~~~~~~i~~~~~~~~~~~d~vi  259 (364)
                      +++|+|+|+|.+|+++++.++.+|+ .|++++++++|.+.+++++...  +++.  ...++.+.+        .++|++|
T Consensus       167 ~~~VlViGaGgvG~~aa~~a~~~Ga-~V~v~dr~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~~--------~~~DvVI  235 (361)
T 1pjc_A          167 PGKVVILGGGVVGTEAAKMAVGLGA-QVQIFDINVERLSYLETLFGSRVELLYS--NSAEIETAV--------AEADLLI  235 (361)
T ss_dssp             CCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHGGGSEEEEC--CHHHHHHHH--------HTCSEEE
T ss_pred             CCEEEEECCCHHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHhhCceeEeeeC--CHHHHHHHH--------cCCCEEE
Confidence            4899999999999999999999999 7899999999999888776543  2221  112222221        2689999


Q ss_pred             ECCCCHHH------HHHHHHhcccCCEEEEEcCCCC-------CccccchhhhhcCcEEEeeccC-------------CC
Q 017916          260 DCAGFNKT------MSTALSATRAGGKVCLVGMGHH-------EMTVPLTPAAVREVDVVGVFRY-------------KN  313 (364)
Q Consensus       260 d~~g~~~~------~~~~~~~l~~~G~~v~~g~~~~-------~~~~~~~~~~~~~~~~~~~~~~-------------~~  313 (364)
                      +|++.+..      ....++.|+++|+++.++...+       ...++...+..+++++.+....             ..
T Consensus       236 ~~~~~~~~~~~~li~~~~~~~~~~g~~ivdv~~~~gg~~e~~~~~~~~~~~~~~~~v~~~~~~~lp~~~~~~~s~~~~~~  315 (361)
T 1pjc_A          236 GAVLVPGRRAPILVPASLVEQMRTGSVIVDVAVDQGGCVETLHPTSHTQPTYEVFGVVHYGVPNMPGAVPWTATQALNNS  315 (361)
T ss_dssp             ECCCCTTSSCCCCBCHHHHTTSCTTCEEEETTCTTCCSBTTCCCCCSSSCEEEETTEEEECCSCGGGGCHHHHHHHHHHH
T ss_pred             ECCCcCCCCCCeecCHHHHhhCCCCCEEEEEecCCCCCCccccCCCCCCCEEEECCEEEEEeCCcchhhHHHHHHHHHHH
Confidence            99986442      5678899999999999985432       2233444456778888775432             23


Q ss_pred             cHHHHHHHHHcC
Q 017916          314 TWPLCLELLRSG  325 (364)
Q Consensus       314 ~~~~~~~~l~~g  325 (364)
                      .+..+++++.+|
T Consensus       316 ~~~~l~~l~~~G  327 (361)
T 1pjc_A          316 TLPYVVKLANQG  327 (361)
T ss_dssp             HHHHHHHHHHHG
T ss_pred             HHHHHHHHHhCC
Confidence            456777888777

>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*

Probab=98.57  E-value=2.9e-07  Score=85.21  Aligned_cols=143  Identities=20%  Similarity=0.249  Sum_probs=97.8

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeE-EecCCC-------------ccc----HHH
Q 017916          181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNI-VKVSTN-------------LQD----IAE  242 (364)
Q Consensus       181 ~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~-~~~~~~-------------~~~----~~~  242 (364)
                      ++++|+|.|+|.+|++++++|+.+|+ .|++++.++++.+.++++|++.+ ++.++.             +++    ..+
T Consensus       171 ~g~~V~ViGaG~iG~~aa~~a~~~Ga-~V~~~d~~~~~~~~~~~~Ga~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~~~  249 (384)
T 1l7d_A          171 PPARVLVFGVGVAGLQAIATAKRLGA-VVMATDVRAATKEQVESLGGKFITVDDEAMKTAETAGGYAKEMGEEFRKKQAE  249 (384)
T ss_dssp             CCCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCSTTHHHHHHTTCEECCC-----------------------CCHHH
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCeEEeecccccccccccccchhhcCHHHHhhhHH
Confidence            68999999999999999999999999 58999999888888888998643 121100             000    111


Q ss_pred             HHHHHHHHcCCCccEEEECC---CCHH--H-HHHHHHhcccCCEEEEEcCCC-CCc--cccchhhhhcCcEEEeeccCCC
Q 017916          243 EVEKIQKAMGTGIDVSFDCA---GFNK--T-MSTALSATRAGGKVCLVGMGH-HEM--TVPLTPAAVREVDVVGVFRYKN  313 (364)
Q Consensus       243 ~i~~~~~~~~~~~d~vid~~---g~~~--~-~~~~~~~l~~~G~~v~~g~~~-~~~--~~~~~~~~~~~~~~~~~~~~~~  313 (364)
                      .+.+..    .+.|++|+|+   |.+.  . ....++.|++++.++.++... ...  ..+...+..+++++.+....+.
T Consensus       250 ~l~~~~----~~aDvVi~~~~~pg~~~~~li~~~~l~~mk~g~vivdva~~~gg~~~~~~~~~~~~~~~v~i~g~~~~p~  325 (384)
T 1l7d_A          250 AVLKEL----VKTDIAITTALIPGKPAPVLITEEMVTKMKPGSVIIDLAVEAGGNCPLSEPGKIVVKHGVKIVGHTNVPS  325 (384)
T ss_dssp             HHHHHH----TTCSEEEECCCCTTSCCCCCSCHHHHTTSCTTCEEEETTGGGTCSSTTCCTTCEEEETTEEEECCSSGGG
T ss_pred             HHHHHh----CCCCEEEECCccCCCCCCeeeCHHHHhcCCCCCEEEEEecCCCCCeecccCCcEEEECCEEEEEeCCCcc
Confidence            132222    4699999999   5322  2 367889999999999998432 221  1233345568899998876643


Q ss_pred             c-HHHHHHHHHcCCCC
Q 017916          314 T-WPLCLELLRSGKID  328 (364)
Q Consensus       314 ~-~~~~~~~l~~g~~~  328 (364)
                      . ...+.+++.++.++
T Consensus       326 ~~~~~a~~l~~~~~~~  341 (384)
T 1l7d_A          326 RVAADASPLFAKNLLN  341 (384)
T ss_dssp             GGHHHHHHHHHHHHHH
T ss_pred             hhHHHHHHHHHHhHHH
Confidence            3 45688888877653

>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}

Probab=98.57  E-value=5e-07  Score=83.17  Aligned_cols=136  Identities=23%  Similarity=0.296  Sum_probs=88.0

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHH-cCCCeEEecCCCcccHHHHHHHHHHHcCCCccEEE
Q 017916          181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKE-LGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF  259 (364)
Q Consensus       181 ~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~-lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vi  259 (364)
                      ++++|+|+|+|.+|+++++.++.+|+ .|+++++++++.+.+++ +|.....+.. ...+    +.+..    .++|++|
T Consensus       165 ~~~~V~ViGaG~iG~~~a~~l~~~Ga-~V~~~d~~~~~~~~~~~~~g~~~~~~~~-~~~~----l~~~~----~~~DvVi  234 (369)
T 2eez_A          165 APASVVILGGGTVGTNAAKIALGMGA-QVTILDVNHKRLQYLDDVFGGRVITLTA-TEAN----IKKSV----QHADLLI  234 (369)
T ss_dssp             CCCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTTTSEEEEEC-CHHH----HHHHH----HHCSEEE
T ss_pred             CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHHhcCceEEEecC-CHHH----HHHHH----hCCCEEE
Confidence            46899999999999999999999999 78899999888877765 7765323321 1122    32322    2689999


Q ss_pred             ECCCCHHH------HHHHHHhcccCCEEEEEcCCCC-------CccccchhhhhcCcEEEeeccC-------------CC
Q 017916          260 DCAGFNKT------MSTALSATRAGGKVCLVGMGHH-------EMTVPLTPAAVREVDVVGVFRY-------------KN  313 (364)
Q Consensus       260 d~~g~~~~------~~~~~~~l~~~G~~v~~g~~~~-------~~~~~~~~~~~~~~~~~~~~~~-------------~~  313 (364)
                      +|++.+..      ....++.|+++|.++.++....       +...+...+..+++++.+....             ..
T Consensus       235 ~~~g~~~~~~~~li~~~~l~~mk~gg~iV~v~~~~gg~~d~~ep~~~~~~~~~~~~v~~~~v~~lp~~~p~~as~~~~~~  314 (369)
T 2eez_A          235 GAVLVPGAKAPKLVTRDMLSLMKEGAVIVDVAVDQGGCVETIRPTTHAEPTYVVDGVVHYGVANMPGAVPRTSTFALTNQ  314 (369)
T ss_dssp             ECCC-------CCSCHHHHTTSCTTCEEEECC-------------------CEETTEEEECCSCSGGGSHHHHHHHHHHH
T ss_pred             ECCCCCccccchhHHHHHHHhhcCCCEEEEEecCCCCCCCcccCCCCCCCEEEECCEEEEeeCCcchhcHHHHHHHHHHH
Confidence            99996532      5678899999999999875322       1122222344577887775432             23


Q ss_pred             cHHHHHHHHHcCC
Q 017916          314 TWPLCLELLRSGK  326 (364)
Q Consensus       314 ~~~~~~~~l~~g~  326 (364)
                      .++.+++++.+|.
T Consensus       315 ~~~~l~~l~~~g~  327 (369)
T 2eez_A          315 TLPYVLKLAEKGL  327 (369)
T ss_dssp             HHHHHHHHHHHTT
T ss_pred             HHHHHHHHHhcCh
Confidence            4566777777663

>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*

Probab=98.53  E-value=3.4e-07  Score=85.03  Aligned_cols=139  Identities=17%  Similarity=0.246  Sum_probs=92.4

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCC-------------cccHH----HH
Q 017916          181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTN-------------LQDIA----EE  243 (364)
Q Consensus       181 ~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~-------------~~~~~----~~  243 (364)
                      ++++|+|+|+|.+|+.++++|+.+|+ .|++++.+.++.+.++++|++.+. ++..             +.++.    +.
T Consensus       171 ~g~~V~ViGaG~iG~~aa~~a~~~Ga-~V~v~D~~~~~~~~~~~lGa~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~  248 (401)
T 1x13_A          171 PPAKVMVIGAGVAGLAAIGAANSLGA-IVRAFDTRPEVKEQVQSMGAEFLE-LDFKEEAGSGDGYAKVMSDAFIKAEMEL  248 (401)
T ss_dssp             CCCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCGGGHHHHHHTTCEECC-C--------CCHHHHHHSHHHHHHHHHH
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHcCCEEEE-ecccccccccccchhhccHHHHHHHHHH
Confidence            58999999999999999999999999 799999999998888899876431 1110             11110    11


Q ss_pred             HHHHHHHcCCCccEEEECCCCH-----HHH-HHHHHhcccCCEEEEEcCC-CCCccccc--h-hhhhcCcEEEeeccCCC
Q 017916          244 VEKIQKAMGTGIDVSFDCAGFN-----KTM-STALSATRAGGKVCLVGMG-HHEMTVPL--T-PAAVREVDVVGVFRYKN  313 (364)
Q Consensus       244 i~~~~~~~~~~~d~vid~~g~~-----~~~-~~~~~~l~~~G~~v~~g~~-~~~~~~~~--~-~~~~~~~~~~~~~~~~~  313 (364)
                      +.+..    .+.|++|++++.+     ..+ ..+++.|++++.++.++.. .+......  . .+..+++++.+....+.
T Consensus       249 l~e~~----~~aDvVI~~~~~pg~~ap~li~~~~l~~mk~g~vIVdva~~~Gg~v~~~~~~~p~~~~~gv~i~g~~~~p~  324 (401)
T 1x13_A          249 FAAQA----KEVDIIVTTALIPGKPAPKLITREMVDSMKAGSVIVDLAAQNGGNCEYTVPGEIFTTENGVKVIGYTDLPG  324 (401)
T ss_dssp             HHHHH----HHCSEEEECCCCTTSCCCCCBCHHHHHTSCTTCEEEETTGGGTCSBTTCCTTSEEECTTSCEEECCSCTGG
T ss_pred             HHHHh----CCCCEEEECCccCCCCCCeeeCHHHHhcCCCCcEEEEEcCCCCCCcCcccCCCceEEECCEEEEeeCCCcc
Confidence            22222    3689999996322     222 5788999999999999843 22222221  2 25578899998766543


Q ss_pred             cHH-HHHHHHHcC
Q 017916          314 TWP-LCLELLRSG  325 (364)
Q Consensus       314 ~~~-~~~~~l~~g  325 (364)
                      .+. .+.+++.++
T Consensus       325 ~~~~~a~~ll~~~  337 (401)
T 1x13_A          325 RLPTQSSQLYGTN  337 (401)
T ss_dssp             GSHHHHHHHHHHH
T ss_pred             cCHHHHHHHHHHh
Confidence            332 355555444

>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*

Probab=98.52  E-value=5.5e-07  Score=83.06  Aligned_cols=119  Identities=15%  Similarity=0.200  Sum_probs=84.3

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHH-cCCCeEEecCCCcccHHHHHHHHHHHcCCCccEEE
Q 017916          181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKE-LGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF  259 (364)
Q Consensus       181 ~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~-lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vi  259 (364)
                      +|++|+|+|+|.+|+++++.++.+|+ .|++++.++++.+.+++ +|.....++.. ..+    +.+..    .++|++|
T Consensus       167 ~g~~V~ViG~G~iG~~~a~~a~~~Ga-~V~~~d~~~~~l~~~~~~~g~~~~~~~~~-~~~----l~~~l----~~aDvVi  236 (377)
T 2vhw_A          167 EPADVVVIGAGTAGYNAARIANGMGA-TVTVLDINIDKLRQLDAEFCGRIHTRYSS-AYE----LEGAV----KRADLVI  236 (377)
T ss_dssp             CCCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTTTSSEEEECC-HHH----HHHHH----HHCSEEE
T ss_pred             CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHhcCCeeEeccCC-HHH----HHHHH----cCCCEEE
Confidence            58999999999999999999999999 78999999998887776 77653222211 122    22222    2689999


Q ss_pred             ECCCCHHH------HHHHHHhcccCCEEEEEcCCC-------CCccccchhhhhcCcEEEeec
Q 017916          260 DCAGFNKT------MSTALSATRAGGKVCLVGMGH-------HEMTVPLTPAAVREVDVVGVF  309 (364)
Q Consensus       260 d~~g~~~~------~~~~~~~l~~~G~~v~~g~~~-------~~~~~~~~~~~~~~~~~~~~~  309 (364)
                      +|++.+..      ....++.|+++|.++.++...       .+...+...+..+++.+.+..
T Consensus       237 ~~~~~p~~~t~~li~~~~l~~mk~g~~iV~va~~~Ggv~e~~ep~~~~~~~~~~~~v~i~~~p  299 (377)
T 2vhw_A          237 GAVLVPGAKAPKLVSNSLVAHMKPGAVLVDIAIDQGGCFEGSRPTTYDHPTFAVHDTLFYCVA  299 (377)
T ss_dssp             ECCCCTTSCCCCCBCHHHHTTSCTTCEEEEGGGGTTCSBTTCCCBCSSSCEEEETTEEEECBT
T ss_pred             ECCCcCCCCCcceecHHHHhcCCCCcEEEEEecCCCCccccccCCCCCCCEEEECCEEEEecC
Confidence            99986543      567889999999999998432       222233333455777766554

>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*

Probab=98.39  E-value=8.5e-07  Score=83.92  Aligned_cols=105  Identities=19%  Similarity=0.224  Sum_probs=83.3

Q ss_pred             hHHHHHHHHHc--CCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHH
Q 017916          167 LSVGLHACRRA--NIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEV  244 (364)
Q Consensus       167 ~~~a~~~l~~~--~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i  244 (364)
                      ..++++++++.  ...+|++|+|.|.|.+|..+++.++.+|+ .|++++.++.+.+.++++|++ +.       ++.+  
T Consensus       257 ~~s~~~g~~r~~~~~l~GktV~IiG~G~IG~~~A~~lka~Ga-~Viv~d~~~~~~~~A~~~Ga~-~~-------~l~e--  325 (494)
T 3ce6_A          257 RHSLIDGINRGTDALIGGKKVLICGYGDVGKGCAEAMKGQGA-RVSVTEIDPINALQAMMEGFD-VV-------TVEE--  325 (494)
T ss_dssp             HHHHHHHHHHHHCCCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCE-EC-------CHHH--
T ss_pred             hhhhhHHHHhccCCCCCcCEEEEEccCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCE-Ee-------cHHH--
Confidence            34566666543  37899999999999999999999999999 789999999998888889975 21       1211  


Q ss_pred             HHHHHHcCCCccEEEECCCCHHHHH-HHHHhcccCCEEEEEcCCC
Q 017916          245 EKIQKAMGTGIDVSFDCAGFNKTMS-TALSATRAGGKVCLVGMGH  288 (364)
Q Consensus       245 ~~~~~~~~~~~d~vid~~g~~~~~~-~~~~~l~~~G~~v~~g~~~  288 (364)
                        .    -.+.|++|+|+|+...+. ..++.|+++|+++.+|...
T Consensus       326 --~----l~~aDvVi~atgt~~~i~~~~l~~mk~ggilvnvG~~~  364 (494)
T 3ce6_A          326 --A----IGDADIVVTATGNKDIIMLEHIKAMKDHAILGNIGHFD  364 (494)
T ss_dssp             --H----GGGCSEEEECSSSSCSBCHHHHHHSCTTCEEEECSSSG
T ss_pred             --H----HhCCCEEEECCCCHHHHHHHHHHhcCCCcEEEEeCCCC
Confidence              1    146899999999766565 7889999999999998643

>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}

Probab=98.16  E-value=1e-05  Score=74.28  Aligned_cols=126  Identities=22%  Similarity=0.258  Sum_probs=84.8

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEe-------------cCC-CcccH----HH
Q 017916          181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVK-------------VST-NLQDI----AE  242 (364)
Q Consensus       181 ~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~-------------~~~-~~~~~----~~  242 (364)
                      ++.+|+|.|+|.+|+.++++++.+|+ .|++.+.++++.+.++++|++.+..             |.. -+.++    .+
T Consensus       189 ~~~kV~ViG~G~iG~~aa~~a~~lGa-~V~v~D~~~~~l~~~~~~G~~~~~~~~~~~~d~~~~~~ya~e~s~~~~~~~~~  267 (405)
T 4dio_A          189 PAAKIFVMGAGVAGLQAIATARRLGA-VVSATDVRPAAKEQVASLGAKFIAVEDEEFKAAETAGGYAKEMSGEYQVKQAA  267 (405)
T ss_dssp             CCCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSTTHHHHHHHTTCEECCCCC-----------------CHHHHHHHH
T ss_pred             CCCEEEEECCcHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHcCCceeecccccccccccccchhhhcchhhhhhhHh
Confidence            57999999999999999999999999 7899999999999999998753211             000 00111    11


Q ss_pred             HHHHHHHHcCCCccEEEECCCCHH------HHHHHHHhcccCCEEEEEcCC-CCCccc--cchhhhhcCcEEEeeccC
Q 017916          243 EVEKIQKAMGTGIDVSFDCAGFNK------TMSTALSATRAGGKVCLVGMG-HHEMTV--PLTPAAVREVDVVGVFRY  311 (364)
Q Consensus       243 ~i~~~~~~~~~~~d~vid~~g~~~------~~~~~~~~l~~~G~~v~~g~~-~~~~~~--~~~~~~~~~~~~~~~~~~  311 (364)
                      .+.+..    .+.|++|.|+..+.      ....+++.|++++.++.++.. ++....  +...+..+++++.+....
T Consensus       268 ~l~e~l----~~aDVVI~tvlipg~~ap~Lvt~emv~~Mk~GsVIVDvA~d~GG~~e~t~~~~~~~~~GV~~~gv~nl  341 (405)
T 4dio_A          268 LVAEHI----AKQDIVITTALIPGRPAPRLVTREMLDSMKPGSVVVDLAVERGGNIEGAEAGKVTEVGGVRIVGHLNV  341 (405)
T ss_dssp             HHHHHH----HTCSEEEECCCCSSSCCCCCBCHHHHTTSCTTCEEEETTGGGTCSBTTCCTTEEEEETTEEEEECSSG
T ss_pred             HHHHHh----cCCCEEEECCcCCCCCCCEEecHHHHhcCCCCCEEEEEeCCCCCCccccCCCCeEEECCEEEEEeCCC
Confidence            222222    47999999864221      235789999999999998732 222111  112244577888887665

>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13

Probab=98.12  E-value=1.1e-05  Score=71.12  Aligned_cols=187  Identities=16%  Similarity=0.148  Sum_probs=105.1

Q ss_pred             eCCCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCC-CCCcceeEEEecCC--ceEECCCCCCccchh--
Q 017916           88 VGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPP-VHGSLANQVVHPAD--LCFKLPDNVSLEEGA--  162 (364)
Q Consensus        88 vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~v~~~~~--~~~~lP~~~~~~~aa--  162 (364)
                      +|+....+++||+|+.+....+..+..+..+... ..+.+...... ....|.+.+.++..  .+..-|+.....++.  
T Consensus        13 ~~~~~~~~~~gd~v~i~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~i~g~~~g~~~~~~~~~~~~~~~p~~~~~~~~~~~   91 (277)
T 1o54_A           13 VGKVADTLKPGDRVLLSFEDESEFLVDLEKDKKL-HTHLGIIDLNEVFEKGPGEIIRTSAGKKGYILIPSLIDEIMNMKR   91 (277)
T ss_dssp             CCCGGGCCCTTCEEEEEETTSCEEEEECCTTCEE-EETTEEEEHHHHTTSCTTCEEECTTCCEEEEECCCHHHHHHTCCC
T ss_pred             cccccCCCCCCCEEEEEECCCcEEEEEEcCCCEE-ecCCceEEHHHhcCCCCCcEEEEcCCcEEEEeCCCHHHHHhhccc
Confidence            5666677999999998754433333223322211 11111110000 11234455555544  333344332211111  


Q ss_pred             --hhhhhHHHHHHHHHcCCCCCCEEEEEcCCHHHHHHHHHHHHCC-CCEEEEEecChhHHHHHHH----cCC-CeEEecC
Q 017916          163 --MCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFG-APRIVIVDVDDYRLSVAKE----LGA-DNIVKVS  234 (364)
Q Consensus       163 --~~~~~~~a~~~l~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g-~~~vv~~~~~~~~~~~~~~----lg~-~~~~~~~  234 (364)
                        .......+...+....++++++||-.|+|. |..++.+++.++ ...+++++.+++..+.+++    .+. ..+....
T Consensus        92 ~~~~~~~~~~~~i~~~~~~~~~~~VLDiG~G~-G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~  170 (277)
T 1o54_A           92 RTQIVYPKDSSFIAMMLDVKEGDRIIDTGVGS-GAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLIERVTIKV  170 (277)
T ss_dssp             -CCCCCHHHHHHHHHHTTCCTTCEEEEECCTT-SHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEEC
T ss_pred             cCCccCHHHHHHHHHHhCCCCCCEEEEECCcC-CHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEE
Confidence              000111222344667889999999999876 888889999864 3489999999988777664    354 2221111


Q ss_pred             CCcccHHHHHHHHHHHcCCCccEEEECCCCH-HHHHHHHHhcccCCEEEEEc
Q 017916          235 TNLQDIAEEVEKIQKAMGTGIDVSFDCAGFN-KTMSTALSATRAGGKVCLVG  285 (364)
Q Consensus       235 ~~~~~~~~~i~~~~~~~~~~~d~vid~~g~~-~~~~~~~~~l~~~G~~v~~g  285 (364)
                         .++.+.   +   ....+|+|+.....+ ..+..+.+.|+++|+++...
T Consensus       171 ---~d~~~~---~---~~~~~D~V~~~~~~~~~~l~~~~~~L~pgG~l~~~~  213 (277)
T 1o54_A          171 ---RDISEG---F---DEKDVDALFLDVPDPWNYIDKCWEALKGGGRFATVC  213 (277)
T ss_dssp             ---CCGGGC---C---SCCSEEEEEECCSCGGGTHHHHHHHEEEEEEEEEEE
T ss_pred             ---CCHHHc---c---cCCccCEEEECCcCHHHHHHHHHHHcCCCCEEEEEe
Confidence               121111   0   134699998766544 67888999999999998874

>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}

Probab=98.06  E-value=2.9e-05  Score=70.71  Aligned_cols=128  Identities=17%  Similarity=0.210  Sum_probs=84.8

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecC-------CC----ccc-HHHHHHHHH
Q 017916          181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVS-------TN----LQD-IAEEVEKIQ  248 (364)
Q Consensus       181 ~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~-------~~----~~~-~~~~i~~~~  248 (364)
                      ++.+|+|.|+|.+|+.+++.++.+|+ .|++.+.+.++.+.++++|++.+ ..+       ..    .++ .......+.
T Consensus       183 ~~~kV~ViG~G~iG~~aa~~a~~lGa-~V~v~D~~~~~l~~~~~lGa~~~-~l~~~~~~~~gya~~~~~~~~~~~~~~l~  260 (381)
T 3p2y_A          183 KPASALVLGVGVAGLQALATAKRLGA-KTTGYDVRPEVAEQVRSVGAQWL-DLGIDAAGEGGYARELSEAERAQQQQALE  260 (381)
T ss_dssp             CCCEEEEESCSHHHHHHHHHHHHHTC-EEEEECSSGGGHHHHHHTTCEEC-CCC-------------CHHHHHHHHHHHH
T ss_pred             CCCEEEEECchHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCeEE-eccccccccccchhhhhHHHHhhhHHHHH
Confidence            67999999999999999999999999 68999999999999999987532 110       00    000 111111121


Q ss_pred             HHcCCCccEEEECCCCHH------HHHHHHHhcccCCEEEEEcCCC-CCc--cccchhhhhcCcEEEeeccC
Q 017916          249 KAMGTGIDVSFDCAGFNK------TMSTALSATRAGGKVCLVGMGH-HEM--TVPLTPAAVREVDVVGVFRY  311 (364)
Q Consensus       249 ~~~~~~~d~vid~~g~~~------~~~~~~~~l~~~G~~v~~g~~~-~~~--~~~~~~~~~~~~~~~~~~~~  311 (364)
                      + .-.+.|+||.++..+.      ....+++.|++++.++.++... +..  ..+...+..+++++.+....
T Consensus       261 e-~l~~aDIVI~tv~iPg~~ap~Lvt~emv~~MkpGsVIVDvA~d~GG~~e~t~~~~~~~~~gV~~~~v~nl  331 (381)
T 3p2y_A          261 D-AITKFDIVITTALVPGRPAPRLVTAAAATGMQPGSVVVDLAGETGGNCELTEPGRTIVHHGVTITSPLNL  331 (381)
T ss_dssp             H-HHTTCSEEEECCCCTTSCCCCCBCHHHHHTSCTTCEEEETTGGGTCSBTTCCTTCEEEETTEEEECCSCT
T ss_pred             H-HHhcCCEEEECCCCCCcccceeecHHHHhcCCCCcEEEEEeCCCCCccccccCCCeEEECCEEEEeeCCC
Confidence            1 1257999999863321      2368899999999999987321 111  11112244567777776654

>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}

Probab=98.01  E-value=2.7e-06  Score=67.15  Aligned_cols=107  Identities=11%  Similarity=0.066  Sum_probs=74.6

Q ss_pred             hhHHHHHHHHHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHH-HHHHcCCCeEEecCCCcccHHHHH
Q 017916          166 PLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLS-VAKELGADNIVKVSTNLQDIAEEV  244 (364)
Q Consensus       166 ~~~~a~~~l~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~-~~~~lg~~~~~~~~~~~~~~~~~i  244 (364)
                      ++++++++++......+.+|+|.|+|.+|.+.++.++..|++ +.+.+++.++.+ +.++++... ..+    .++.+.+
T Consensus         5 ~~sv~~~a~~~~~~~~~~~v~iiG~G~iG~~~a~~l~~~g~~-v~v~~r~~~~~~~~a~~~~~~~-~~~----~~~~~~~   78 (144)
T 3oj0_A            5 KVSIPSIVYDIVRKNGGNKILLVGNGMLASEIAPYFSYPQYK-VTVAGRNIDHVRAFAEKYEYEY-VLI----NDIDSLI   78 (144)
T ss_dssp             CCSHHHHHHHHHHHHCCCEEEEECCSHHHHHHGGGCCTTTCE-EEEEESCHHHHHHHHHHHTCEE-EEC----SCHHHHH
T ss_pred             cccHHHHHHHHHHhccCCEEEEECCCHHHHHHHHHHHhCCCE-EEEEcCCHHHHHHHHHHhCCce-Eee----cCHHHHh
Confidence            345677777655445589999999999999999998889996 888888887765 466777532 222    2222221


Q ss_pred             HHHHHHcCCCccEEEECCCCHHHHHHHHHhcccCCEEEEEcCC
Q 017916          245 EKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMG  287 (364)
Q Consensus       245 ~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~  287 (364)
                              .+.|++|+|++++.... ....+++++.++.++.+
T Consensus        79 --------~~~Divi~at~~~~~~~-~~~~l~~g~~vid~~~p  112 (144)
T 3oj0_A           79 --------KNNDVIITATSSKTPIV-EERSLMPGKLFIDLGNP  112 (144)
T ss_dssp             --------HTCSEEEECSCCSSCSB-CGGGCCTTCEEEECCSS
T ss_pred             --------cCCCEEEEeCCCCCcEe-eHHHcCCCCEEEEccCC
Confidence                    25899999999653221 22677888888887653

>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*

Probab=97.98  E-value=4e-05  Score=67.46  Aligned_cols=99  Identities=16%  Similarity=0.298  Sum_probs=73.1

Q ss_pred             HcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHc----CCCeEEecCCCcccHHHHHHHHHHHc
Q 017916          176 RANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKEL----GADNIVKVSTNLQDIAEEVEKIQKAM  251 (364)
Q Consensus       176 ~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~l----g~~~~~~~~~~~~~~~~~i~~~~~~~  251 (364)
                      .++++++++||..|+|..+..++.+|+..|+ .|++++.+++..+.+++.    |...+-....   +..+    +   .
T Consensus       117 la~l~~g~rVLDIGcG~G~~ta~~lA~~~ga-~V~gIDis~~~l~~Ar~~~~~~gl~~v~~v~g---Da~~----l---~  185 (298)
T 3fpf_A          117 LGRFRRGERAVFIGGGPLPLTGILLSHVYGM-RVNVVEIEPDIAELSRKVIEGLGVDGVNVITG---DETV----I---D  185 (298)
T ss_dssp             HTTCCTTCEEEEECCCSSCHHHHHHHHTTCC-EEEEEESSHHHHHHHHHHHHHHTCCSEEEEES---CGGG----G---G
T ss_pred             HcCCCCcCEEEEECCCccHHHHHHHHHccCC-EEEEEECCHHHHHHHHHHHHhcCCCCeEEEEC---chhh----C---C
Confidence            3788999999999998767788888888888 799999999988877653    5532221111   1111    1   1


Q ss_pred             CCCccEEEECCCCH---HHHHHHHHhcccCCEEEEEc
Q 017916          252 GTGIDVSFDCAGFN---KTMSTALSATRAGGKVCLVG  285 (364)
Q Consensus       252 ~~~~d~vid~~g~~---~~~~~~~~~l~~~G~~v~~g  285 (364)
                      ...||+|+.+...+   ..+.++.+.|+|||+++...
T Consensus       186 d~~FDvV~~~a~~~d~~~~l~el~r~LkPGG~Lvv~~  222 (298)
T 3fpf_A          186 GLEFDVLMVAALAEPKRRVFRNIHRYVDTETRIIYRT  222 (298)
T ss_dssp             GCCCSEEEECTTCSCHHHHHHHHHHHCCTTCEEEEEE
T ss_pred             CCCcCEEEECCCccCHHHHHHHHHHHcCCCcEEEEEc
Confidence            36799999765533   68889999999999999765

>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13

Probab=97.85  E-value=5.9e-05  Score=66.33  Aligned_cols=104  Identities=23%  Similarity=0.241  Sum_probs=71.5

Q ss_pred             HHHHcCCCCCCEEEEEcCCHHHHHHHHHHHHCC-CCEEEEEecChhHHHHHHHc-----C--CCeEEecCCCcccHHHHH
Q 017916          173 ACRRANIGPETNVLIMGAGPIGLVTMLGARAFG-APRIVIVDVDDYRLSVAKEL-----G--ADNIVKVSTNLQDIAEEV  244 (364)
Q Consensus       173 ~l~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g-~~~vv~~~~~~~~~~~~~~l-----g--~~~~~~~~~~~~~~~~~i  244 (364)
                      .+....++++++||..|+| .|..+..+++..+ ...+++++.+++..+.+++.     |  ...+.....   +..+. 
T Consensus        91 i~~~~~~~~~~~vLdiG~G-~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v~~~~~---d~~~~-  165 (280)
T 1i9g_A           91 IVHEGDIFPGARVLEAGAG-SGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVS---DLADS-  165 (280)
T ss_dssp             HHHHTTCCTTCEEEEECCT-TSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECS---CGGGC-
T ss_pred             HHHHcCCCCCCEEEEEccc-ccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCCcEEEEEC---chHhc-
Confidence            3466788999999999987 5888889998754 34899999999887776642     4  222221111   11110 


Q ss_pred             HHHHHHcCCCccEEEECCCCH-HHHHHHHHhcccCCEEEEEc
Q 017916          245 EKIQKAMGTGIDVSFDCAGFN-KTMSTALSATRAGGKVCLVG  285 (364)
Q Consensus       245 ~~~~~~~~~~~d~vid~~g~~-~~~~~~~~~l~~~G~~v~~g  285 (364)
                          ......+|+|+.....+ ..+..+.+.|+++|+++.+.
T Consensus       166 ----~~~~~~~D~v~~~~~~~~~~l~~~~~~L~pgG~l~~~~  203 (280)
T 1i9g_A          166 ----ELPDGSVDRAVLDMLAPWEVLDAVSRLLVAGGVLMVYV  203 (280)
T ss_dssp             ----CCCTTCEEEEEEESSCGGGGHHHHHHHEEEEEEEEEEE
T ss_pred             ----CCCCCceeEEEECCcCHHHHHHHHHHhCCCCCEEEEEe
Confidence                00134699988655544 78889999999999998875

>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33

Probab=97.83  E-value=3.2e-05  Score=67.64  Aligned_cols=94  Identities=19%  Similarity=0.163  Sum_probs=68.8

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHC-CCCEEEEEecChhHHHHHHHcCCC-eEEecCCCcccHHHHHHHHHHHcCCCccE
Q 017916          180 GPETNVLIMGAGPIGLVTMLGARAF-GAPRIVIVDVDDYRLSVAKELGAD-NIVKVSTNLQDIAEEVEKIQKAMGTGIDV  257 (364)
Q Consensus       180 ~~g~~VLI~Gag~~G~~ai~la~~~-g~~~vv~~~~~~~~~~~~~~lg~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~d~  257 (364)
                      .++.+||..|+|. |..+..+++.. |. .+++++.+++..+.+++.+.. .+..-+..  ++.        ...+.+|+
T Consensus        84 ~~~~~vLdiG~G~-G~~~~~l~~~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~--~~~--------~~~~~fD~  151 (269)
T 1p91_A           84 DKATAVLDIGCGE-GYYTHAFADALPEI-TTFGLDVSKVAIKAAAKRYPQVTFCVASSH--RLP--------FSDTSMDA  151 (269)
T ss_dssp             TTCCEEEEETCTT-STTHHHHHHTCTTS-EEEEEESCHHHHHHHHHHCTTSEEEECCTT--SCS--------BCTTCEEE
T ss_pred             CCCCEEEEECCCC-CHHHHHHHHhCCCC-eEEEEeCCHHHHHHHHHhCCCcEEEEcchh--hCC--------CCCCceeE
Confidence            6789999999877 88889999987 55 799999999999988876533 22221111  110        01357999


Q ss_pred             EEECCCCHHHHHHHHHhcccCCEEEEEcC
Q 017916          258 SFDCAGFNKTMSTALSATRAGGKVCLVGM  286 (364)
Q Consensus       258 vid~~g~~~~~~~~~~~l~~~G~~v~~g~  286 (364)
                      |+.... ...+..+.+.|+|+|+++....
T Consensus       152 v~~~~~-~~~l~~~~~~L~pgG~l~~~~~  179 (269)
T 1p91_A          152 IIRIYA-PCKAEELARVVKPGGWVITATP  179 (269)
T ss_dssp             EEEESC-CCCHHHHHHHEEEEEEEEEEEE
T ss_pred             EEEeCC-hhhHHHHHHhcCCCcEEEEEEc
Confidence            996444 6678999999999999988753

>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}

Probab=97.81  E-value=0.00016  Score=54.25  Aligned_cols=96  Identities=24%  Similarity=0.261  Sum_probs=64.0

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcCCCccEEEE
Q 017916          181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  260 (364)
Q Consensus       181 ~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid  260 (364)
                      .+.+|+|+|+|.+|..+++.+...|...|+++++++++.+.+...+.... ..+-.  + .+.+.+.    -.++|++|+
T Consensus         4 ~~~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~-~~d~~--~-~~~~~~~----~~~~d~vi~   75 (118)
T 3ic5_A            4 MRWNICVVGAGKIGQMIAALLKTSSNYSVTVADHDLAALAVLNRMGVATK-QVDAK--D-EAGLAKA----LGGFDAVIS   75 (118)
T ss_dssp             TCEEEEEECCSHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHHTTTCEEE-ECCTT--C-HHHHHHH----TTTCSEEEE
T ss_pred             CcCeEEEECCCHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhCCCcEE-EecCC--C-HHHHHHH----HcCCCEEEE
Confidence            35689999999999999999999993368888888888887776665432 22221  1 1233333    247999999


Q ss_pred             CCCCHHHHHHHHHhcccCCEEEEE
Q 017916          261 CAGFNKTMSTALSATRAGGKVCLV  284 (364)
Q Consensus       261 ~~g~~~~~~~~~~~l~~~G~~v~~  284 (364)
                      |++..........++..+-.++.+
T Consensus        76 ~~~~~~~~~~~~~~~~~g~~~~~~   99 (118)
T 3ic5_A           76 AAPFFLTPIIAKAAKAAGAHYFDL   99 (118)
T ss_dssp             CSCGGGHHHHHHHHHHTTCEEECC
T ss_pred             CCCchhhHHHHHHHHHhCCCEEEe
Confidence            998544434444455555555544

>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*

Probab=97.74  E-value=0.00024  Score=65.51  Aligned_cols=104  Identities=18%  Similarity=0.286  Sum_probs=77.7

Q ss_pred             HHHHHHHH--cCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHH
Q 017916          169 VGLHACRR--ANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEK  246 (364)
Q Consensus       169 ~a~~~l~~--~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~  246 (364)
                      ..+.++.+  ...-.|.+|+|.|.|.+|..+++.++.+|+ .|++++.++.+...+...|... .       +    +.+
T Consensus       205 s~~~gi~rat~~~L~GktV~ViG~G~IGk~vA~~Lra~Ga-~Viv~D~dp~ra~~A~~~G~~v-~-------~----Lee  271 (435)
T 3gvp_A          205 SILDGLKRTTDMMFGGKQVVVCGYGEVGKGCCAALKAMGS-IVYVTEIDPICALQACMDGFRL-V-------K----LNE  271 (435)
T ss_dssp             HHHHHHHHHHCCCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCEE-C-------C----HHH
T ss_pred             HHHHHHHHhhCceecCCEEEEEeeCHHHHHHHHHHHHCCC-EEEEEeCChhhhHHHHHcCCEe-c-------c----HHH
Confidence            34555533  335689999999999999999999999999 6888988887766666667531 1       1    222


Q ss_pred             HHHHcCCCccEEEECCCCHHHHH-HHHHhcccCCEEEEEcCCCC
Q 017916          247 IQKAMGTGIDVSFDCAGFNKTMS-TALSATRAGGKVCLVGMGHH  289 (364)
Q Consensus       247 ~~~~~~~~~d~vid~~g~~~~~~-~~~~~l~~~G~~v~~g~~~~  289 (364)
                      .    -...|+++.|.|....+. ..++.|++++.++.++....
T Consensus       272 a----l~~ADIVi~atgt~~lI~~e~l~~MK~gailINvgrg~~  311 (435)
T 3gvp_A          272 V----IRQVDIVITCTGNKNVVTREHLDRMKNSCIVCNMGHSNT  311 (435)
T ss_dssp             H----TTTCSEEEECSSCSCSBCHHHHHHSCTTEEEEECSSTTT
T ss_pred             H----HhcCCEEEECCCCcccCCHHHHHhcCCCcEEEEecCCCc
Confidence            2    246899999988665555 78899999999999886543

>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}

Probab=97.70  E-value=0.00039  Score=61.63  Aligned_cols=112  Identities=15%  Similarity=0.152  Sum_probs=78.2

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcCCCccEEE
Q 017916          180 GPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF  259 (364)
Q Consensus       180 ~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vi  259 (364)
                      -.|.+|+|.|.|.+|.++++.++.+|+ .|++.+++.++.+.++++|+.. .++    .++    .+.    -...|+++
T Consensus       153 l~g~~v~IiG~G~iG~~~a~~l~~~G~-~V~~~dr~~~~~~~~~~~g~~~-~~~----~~l----~~~----l~~aDvVi  218 (293)
T 3d4o_A          153 IHGANVAVLGLGRVGMSVARKFAALGA-KVKVGARESDLLARIAEMGMEP-FHI----SKA----AQE----LRDVDVCI  218 (293)
T ss_dssp             STTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHTTSEE-EEG----GGH----HHH----TTTCSEEE
T ss_pred             CCCCEEEEEeeCHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHHCCCee-cCh----hhH----HHH----hcCCCEEE
Confidence            468999999999999999999999999 7888888888777677778653 221    122    222    24789999


Q ss_pred             ECCCCHHHHHHHHHhcccCCEEEEEcCCCCCccccchhhhhcCcEEEe
Q 017916          260 DCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAVREVDVVG  307 (364)
Q Consensus       260 d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~  307 (364)
                      .++...-.-...++.+++++.++.++.......+  .....+++.+..
T Consensus       219 ~~~p~~~i~~~~l~~mk~~~~lin~ar~~~~~~~--~~a~~~Gv~~~~  264 (293)
T 3d4o_A          219 NTIPALVVTANVLAEMPSHTFVIDLASKPGGTDF--RYAEKRGIKALL  264 (293)
T ss_dssp             ECCSSCCBCHHHHHHSCTTCEEEECSSTTCSBCH--HHHHHHTCEEEE
T ss_pred             ECCChHHhCHHHHHhcCCCCEEEEecCCCCCCCH--HHHHHCCCEEEE
Confidence            9987422223567889999999998764433332  333445555543

>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13

Probab=97.63  E-value=0.00016  Score=65.41  Aligned_cols=107  Identities=20%  Similarity=0.258  Sum_probs=68.1

Q ss_pred             HHHHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCC-CEEEEEecChhHHHHHHHc----C-----------CCeEEecCCC
Q 017916          173 ACRRANIGPETNVLIMGAGPIGLVTMLGARAFGA-PRIVIVDVDDYRLSVAKEL----G-----------ADNIVKVSTN  236 (364)
Q Consensus       173 ~l~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~-~~vv~~~~~~~~~~~~~~l----g-----------~~~~~~~~~~  236 (364)
                      .+....+++|++||-.|+|. |..++.+++..|. ..+++++.+++..+.+++.    +           ...+......
T Consensus        97 ~l~~l~~~~g~~VLDiG~G~-G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~~~~d  175 (336)
T 2b25_A           97 ILSMMDINPGDTVLEAGSGS-GGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHKD  175 (336)
T ss_dssp             HHHHHTCCTTCEEEEECCTT-SHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEESC
T ss_pred             HHHhcCCCCCCEEEEeCCCc-CHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceEEEECC
Confidence            44556789999999999866 7788888888764 5899999999877776542    1           1111111111


Q ss_pred             cccHHHHHHHHHHHcCCCccEEEECCCCH-HHHHHHHHhcccCCEEEEEcC
Q 017916          237 LQDIAEEVEKIQKAMGTGIDVSFDCAGFN-KTMSTALSATRAGGKVCLVGM  286 (364)
Q Consensus       237 ~~~~~~~i~~~~~~~~~~~d~vid~~g~~-~~~~~~~~~l~~~G~~v~~g~  286 (364)
                      -.+.   ...+.   ...+|+|+-....+ ..+..+.+.|+|+|+++.+..
T Consensus       176 ~~~~---~~~~~---~~~fD~V~~~~~~~~~~l~~~~~~LkpgG~lv~~~~  220 (336)
T 2b25_A          176 ISGA---TEDIK---SLTFDAVALDMLNPHVTLPVFYPHLKHGGVCAVYVV  220 (336)
T ss_dssp             TTCC---C----------EEEEEECSSSTTTTHHHHGGGEEEEEEEEEEES
T ss_pred             hHHc---ccccC---CCCeeEEEECCCCHHHHHHHHHHhcCCCcEEEEEeC
Confidence            1111   00111   24699988654433 457889999999999997643

>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*

Probab=97.62  E-value=0.00022  Score=56.72  Aligned_cols=91  Identities=19%  Similarity=0.213  Sum_probs=62.3

Q ss_pred             CCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHH-HcCCCeEEecCCCcccHHHHHHHHHHHcCCCccE
Q 017916          179 IGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAK-ELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDV  257 (364)
Q Consensus       179 ~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~-~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~  257 (364)
                      ..++++|+|.|+|.+|..+++.++..|. .|++++.++++.+.++ ..|... +.-+.  .+ .+.++   .....++|+
T Consensus        16 ~~~~~~v~IiG~G~iG~~la~~L~~~g~-~V~vid~~~~~~~~~~~~~g~~~-~~~d~--~~-~~~l~---~~~~~~ad~   87 (155)
T 2g1u_A           16 KQKSKYIVIFGCGRLGSLIANLASSSGH-SVVVVDKNEYAFHRLNSEFSGFT-VVGDA--AE-FETLK---ECGMEKADM   87 (155)
T ss_dssp             -CCCCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCGGGGGGSCTTCCSEE-EESCT--TS-HHHHH---TTTGGGCSE
T ss_pred             ccCCCcEEEECCCHHHHHHHHHHHhCCC-eEEEEECCHHHHHHHHhcCCCcE-EEecC--CC-HHHHH---HcCcccCCE
Confidence            3578999999999999999999999998 6888888888877666 566543 22111  12 12222   111247999


Q ss_pred             EEECCCCHHHHHHHHHhccc
Q 017916          258 SFDCAGFNKTMSTALSATRA  277 (364)
Q Consensus       258 vid~~g~~~~~~~~~~~l~~  277 (364)
                      +|.|+++......+...++.
T Consensus        88 Vi~~~~~~~~~~~~~~~~~~  107 (155)
T 2g1u_A           88 VFAFTNDDSTNFFISMNARY  107 (155)
T ss_dssp             EEECSSCHHHHHHHHHHHHH
T ss_pred             EEEEeCCcHHHHHHHHHHHH
Confidence            99999976655555555554

>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}

Probab=97.50  E-value=0.0008  Score=59.78  Aligned_cols=112  Identities=14%  Similarity=0.122  Sum_probs=78.1

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcCCCccEEE
Q 017916          180 GPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF  259 (364)
Q Consensus       180 ~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vi  259 (364)
                      -.|.+|+|.|+|.+|..+++.++.+|+ .|++.+++.++.+.+.++|.. .+.+    .+    +.+.    -.+.|+|+
T Consensus       155 l~g~~v~IiG~G~iG~~~a~~l~~~G~-~V~~~d~~~~~~~~~~~~g~~-~~~~----~~----l~~~----l~~aDvVi  220 (300)
T 2rir_A          155 IHGSQVAVLGLGRTGMTIARTFAALGA-NVKVGARSSAHLARITEMGLV-PFHT----DE----LKEH----VKDIDICI  220 (300)
T ss_dssp             STTSEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHTTCE-EEEG----GG----HHHH----STTCSEEE
T ss_pred             CCCCEEEEEcccHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHCCCe-EEch----hh----HHHH----hhCCCEEE
Confidence            468999999999999999999999999 788888888877766677764 2221    12    2222    24789999


Q ss_pred             ECCCCHHHHHHHHHhcccCCEEEEEcCCCCCccccchhhhhcCcEEEe
Q 017916          260 DCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAVREVDVVG  307 (364)
Q Consensus       260 d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~  307 (364)
                      .++...-.-...++.+++++.++.++.......+  .....+++.+..
T Consensus       221 ~~~p~~~i~~~~~~~mk~g~~lin~a~g~~~~~~--~~a~~~G~~~i~  266 (300)
T 2rir_A          221 NTIPSMILNQTVLSSMTPKTLILDLASRPGGTDF--KYAEKQGIKALL  266 (300)
T ss_dssp             ECCSSCCBCHHHHTTSCTTCEEEECSSTTCSBCH--HHHHHHTCEEEE
T ss_pred             ECCChhhhCHHHHHhCCCCCEEEEEeCCCCCcCH--HHHHHCCCEEEE
Confidence            9987422223567889999999998865443332  334445555543

>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}

Probab=97.33  E-value=0.002  Score=59.50  Aligned_cols=102  Identities=17%  Similarity=0.171  Sum_probs=74.7

Q ss_pred             HHHHHHH--cCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHH
Q 017916          170 GLHACRR--ANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKI  247 (364)
Q Consensus       170 a~~~l~~--~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~  247 (364)
                      .+.++.+  ...-.|.+|+|.|.|.+|..+++.++.+|+ .|++++.++.+...+...|... .       ++.    ++
T Consensus       233 lvdgI~Ratg~~L~GKTVgVIG~G~IGr~vA~~lrafGa-~Viv~d~dp~~a~~A~~~G~~v-v-------~Le----El  299 (464)
T 3n58_A          233 LVDGIRRGTDVMMAGKVAVVCGYGDVGKGSAQSLAGAGA-RVKVTEVDPICALQAAMDGFEV-V-------TLD----DA  299 (464)
T ss_dssp             HHHHHHHHHCCCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSHHHHHHHHHTTCEE-C-------CHH----HH
T ss_pred             HHHHHHHhcCCcccCCEEEEECcCHHHHHHHHHHHHCCC-EEEEEeCCcchhhHHHhcCcee-c-------cHH----HH
Confidence            4445533  345689999999999999999999999999 6888887776655555566532 1       121    22


Q ss_pred             HHHcCCCccEEEECCCCHHHH-HHHHHhcccCCEEEEEcCCC
Q 017916          248 QKAMGTGIDVSFDCAGFNKTM-STALSATRAGGKVCLVGMGH  288 (364)
Q Consensus       248 ~~~~~~~~d~vid~~g~~~~~-~~~~~~l~~~G~~v~~g~~~  288 (364)
                      .    ...|+++.+.|....+ ...+..|++++.++..|...
T Consensus       300 L----~~ADIVv~atgt~~lI~~e~l~~MK~GAILINvGRgd  337 (464)
T 3n58_A          300 A----STADIVVTTTGNKDVITIDHMRKMKDMCIVGNIGHFD  337 (464)
T ss_dssp             G----GGCSEEEECCSSSSSBCHHHHHHSCTTEEEEECSSST
T ss_pred             H----hhCCEEEECCCCccccCHHHHhcCCCCeEEEEcCCCC
Confidence            1    3689999998865444 47889999999999887543

>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*

Probab=97.31  E-value=0.00063  Score=63.85  Aligned_cols=91  Identities=16%  Similarity=0.265  Sum_probs=70.4

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcCCCccEEE
Q 017916          180 GPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF  259 (364)
Q Consensus       180 ~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vi  259 (364)
                      -.|.+++|+|+|.+|.++++.++.+|+ .|++++.++.+...+...+++. .+.    ++           ....+|+++
T Consensus       263 L~GKtVvVtGaGgIG~aiA~~Laa~GA-~Viv~D~~~~~a~~Aa~~g~dv-~~l----ee-----------~~~~aDvVi  325 (488)
T 3ond_A          263 IAGKVAVVAGYGDVGKGCAAALKQAGA-RVIVTEIDPICALQATMEGLQV-LTL----ED-----------VVSEADIFV  325 (488)
T ss_dssp             CTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCEE-CCG----GG-----------TTTTCSEEE
T ss_pred             ccCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHhCCcc-CCH----HH-----------HHHhcCEEE
Confidence            478999999999999999999999999 6888888888777766666531 111    11           134689999


Q ss_pred             ECCCCHHHHH-HHHHhcccCCEEEEEcCC
Q 017916          260 DCAGFNKTMS-TALSATRAGGKVCLVGMG  287 (364)
Q Consensus       260 d~~g~~~~~~-~~~~~l~~~G~~v~~g~~  287 (364)
                      ++.|..+.+. ..++.+++++.++..|..
T Consensus       326 ~atG~~~vl~~e~l~~mk~gaiVvNaG~~  354 (488)
T 3ond_A          326 TTTGNKDIIMLDHMKKMKNNAIVCNIGHF  354 (488)
T ss_dssp             ECSSCSCSBCHHHHTTSCTTEEEEESSST
T ss_pred             eCCCChhhhhHHHHHhcCCCeEEEEcCCC
Confidence            9998765554 378899999999888754

>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0

Probab=97.31  E-value=0.0028  Score=52.53  Aligned_cols=104  Identities=14%  Similarity=0.183  Sum_probs=72.7

Q ss_pred             HHHHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHH----cCCCeEEecCCCcccHHHHHHHHH
Q 017916          173 ACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKE----LGADNIVKVSTNLQDIAEEVEKIQ  248 (364)
Q Consensus       173 ~l~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~i~~~~  248 (364)
                      .+....++++++||-.|+|. |..++.+++..+...+++++.+++..+.+++    .+...+.....   +..+.+.   
T Consensus        32 ~l~~l~~~~~~~vLDiG~G~-G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~---d~~~~~~---  104 (204)
T 3e05_A           32 TLSKLRLQDDLVMWDIGAGS-ASVSIEASNLMPNGRIFALERNPQYLGFIRDNLKKFVARNVTLVEA---FAPEGLD---  104 (204)
T ss_dssp             HHHHTTCCTTCEEEEETCTT-CHHHHHHHHHCTTSEEEEEECCHHHHHHHHHHHHHHTCTTEEEEEC---CTTTTCT---
T ss_pred             HHHHcCCCCCCEEEEECCCC-CHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeC---Chhhhhh---
Confidence            34667889999999999875 8888899988755589999999988777654    34432211111   1110010   


Q ss_pred             HHcCCCccEEEECCC---CHHHHHHHHHhcccCCEEEEEc
Q 017916          249 KAMGTGIDVSFDCAG---FNKTMSTALSATRAGGKVCLVG  285 (364)
Q Consensus       249 ~~~~~~~d~vid~~g---~~~~~~~~~~~l~~~G~~v~~g  285 (364)
                        ....+|+|+....   ....+..+.+.|+++|+++...
T Consensus       105 --~~~~~D~i~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~  142 (204)
T 3e05_A          105 --DLPDPDRVFIGGSGGMLEEIIDAVDRRLKSEGVIVLNA  142 (204)
T ss_dssp             --TSCCCSEEEESCCTTCHHHHHHHHHHHCCTTCEEEEEE
T ss_pred             --cCCCCCEEEECCCCcCHHHHHHHHHHhcCCCeEEEEEe
Confidence              1246999997654   2567889999999999999864

>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}

Probab=97.30  E-value=0.0034  Score=51.15  Aligned_cols=95  Identities=18%  Similarity=0.197  Sum_probs=64.6

Q ss_pred             CCEEEEEcCCHHHHHHHHHHHHC-CCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHH-cCCCccEEE
Q 017916          182 ETNVLIMGAGPIGLVTMLGARAF-GAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKA-MGTGIDVSF  259 (364)
Q Consensus       182 g~~VLI~Gag~~G~~ai~la~~~-g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~d~vi  259 (364)
                      +++|+|.|.|.+|..+++.++.. |. .|++++.++++.+.+++.|...+.. +..+.   +.++   .. .-.++|++|
T Consensus        39 ~~~v~IiG~G~~G~~~a~~L~~~~g~-~V~vid~~~~~~~~~~~~g~~~~~g-d~~~~---~~l~---~~~~~~~ad~vi  110 (183)
T 3c85_A           39 HAQVLILGMGRIGTGAYDELRARYGK-ISLGIEIREEAAQQHRSEGRNVISG-DATDP---DFWE---RILDTGHVKLVL  110 (183)
T ss_dssp             TCSEEEECCSHHHHHHHHHHHHHHCS-CEEEEESCHHHHHHHHHTTCCEEEC-CTTCH---HHHH---TBCSCCCCCEEE
T ss_pred             CCcEEEECCCHHHHHHHHHHHhccCC-eEEEEECCHHHHHHHHHCCCCEEEc-CCCCH---HHHH---hccCCCCCCEEE
Confidence            67899999999999999999998 98 5788889999988888888764331 11111   1121   21 235799999


Q ss_pred             ECCCCHHHHHHHHHh---cccCCEEEEE
Q 017916          260 DCAGFNKTMSTALSA---TRAGGKVCLV  284 (364)
Q Consensus       260 d~~g~~~~~~~~~~~---l~~~G~~v~~  284 (364)
                      .++++..........   +.+..+++..
T Consensus       111 ~~~~~~~~~~~~~~~~~~~~~~~~ii~~  138 (183)
T 3c85_A          111 LAMPHHQGNQTALEQLQRRNYKGQIAAI  138 (183)
T ss_dssp             ECCSSHHHHHHHHHHHHHTTCCSEEEEE
T ss_pred             EeCCChHHHHHHHHHHHHHCCCCEEEEE
Confidence            999975544444333   3444566543

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}

Probab=97.29  E-value=0.0029  Score=55.18  Aligned_cols=103  Identities=30%  Similarity=0.372  Sum_probs=70.9

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHH-HHHHcCCCeE-EecC-CCcccHHHHHHHHHHHcCCCcc
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLS-VAKELGADNI-VKVS-TNLQDIAEEVEKIQKAMGTGID  256 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~-~~~~lg~~~~-~~~~-~~~~~~~~~i~~~~~~~~~~~d  256 (364)
                      +|.++||+|+ +++|.+.++.+...|+ .|+.++++.++.+ .++++|.... +..| ...+++.+.+++..+.. +++|
T Consensus        28 ~gKvalVTGas~GIG~aiA~~la~~Ga-~V~i~~r~~~~l~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~-G~iD  105 (273)
T 4fgs_A           28 NAKIAVITGATSGIGLAAAKRFVAEGA-RVFITGRRKDVLDAAIAEIGGGAVGIQADSANLAELDRLYEKVKAEA-GRID  105 (273)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHH-SCEE
T ss_pred             CCCEEEEeCcCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHcCCCeEEEEecCCCHHHHHHHHHHHHHHc-CCCC
Confidence            6889999998 9999999999999999 6788888887765 4466775432 2222 22234444444444333 4799


Q ss_pred             EEEECCCCH-------------------------HHHHHHHHhcccCCEEEEEc
Q 017916          257 VSFDCAGFN-------------------------KTMSTALSATRAGGKVCLVG  285 (364)
Q Consensus       257 ~vid~~g~~-------------------------~~~~~~~~~l~~~G~~v~~g  285 (364)
                      ++++++|..                         ...+.++..|+++|.++.++
T Consensus       106 iLVNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~G~IInis  159 (273)
T 4fgs_A          106 VLFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLARGSSVVLTG  159 (273)
T ss_dssp             EEEECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEC
T ss_pred             EEEECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCeEEEEe
Confidence            999998742                         13445566777889998886

>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}

Probab=97.27  E-value=0.003  Score=52.54  Aligned_cols=103  Identities=13%  Similarity=0.101  Sum_probs=70.9

Q ss_pred             HHHHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHH----cCCC-eEEecCCCcccHHHHHHHH
Q 017916          173 ACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKE----LGAD-NIVKVSTNLQDIAEEVEKI  247 (364)
Q Consensus       173 ~l~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~----lg~~-~~~~~~~~~~~~~~~i~~~  247 (364)
                      .+....++++++||-.|+|. |..++.+|+. +. .|++++.+++..+.+++    +|.. .+......-.+   .+.  
T Consensus        47 ~l~~l~~~~~~~vLDlGcG~-G~~~~~la~~-~~-~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~---~~~--  118 (204)
T 3njr_A           47 TLAALAPRRGELLWDIGGGS-GSVSVEWCLA-GG-RAITIEPRADRIENIQKNIDTYGLSPRMRAVQGTAPA---ALA--  118 (204)
T ss_dssp             HHHHHCCCTTCEEEEETCTT-CHHHHHHHHT-TC-EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCTTG---GGT--
T ss_pred             HHHhcCCCCCCEEEEecCCC-CHHHHHHHHc-CC-EEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeCchhh---hcc--
Confidence            45667788999999999875 7888888888 66 79999999988777654    4554 22211111111   110  


Q ss_pred             HHHcCCCccEEEECCCC-HHHHHHHHHhcccCCEEEEEcC
Q 017916          248 QKAMGTGIDVSFDCAGF-NKTMSTALSATRAGGKVCLVGM  286 (364)
Q Consensus       248 ~~~~~~~~d~vid~~g~-~~~~~~~~~~l~~~G~~v~~g~  286 (364)
                         ....+|+|+...+. .+.+..+.+.|+|+|+++....
T Consensus       119 ---~~~~~D~v~~~~~~~~~~l~~~~~~LkpgG~lv~~~~  155 (204)
T 3njr_A          119 ---DLPLPEAVFIGGGGSQALYDRLWEWLAPGTRIVANAV  155 (204)
T ss_dssp             ---TSCCCSEEEECSCCCHHHHHHHHHHSCTTCEEEEEEC
T ss_pred             ---cCCCCCEEEECCcccHHHHHHHHHhcCCCcEEEEEec
Confidence               12469999865442 3378899999999999987643

>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}

Probab=97.26  E-value=0.0057  Score=47.46  Aligned_cols=95  Identities=11%  Similarity=0.062  Sum_probs=65.8

Q ss_pred             CCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcCCCccEEEEC
Q 017916          182 ETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDC  261 (364)
Q Consensus       182 g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid~  261 (364)
                      .++|+|.|.|.+|...++.++..|. .|++++.++++.+.+++.|...+. -+...++   .+++.   .-.++|+++-+
T Consensus         7 ~~~viIiG~G~~G~~la~~L~~~g~-~v~vid~~~~~~~~~~~~g~~~i~-gd~~~~~---~l~~a---~i~~ad~vi~~   78 (140)
T 3fwz_A            7 CNHALLVGYGRVGSLLGEKLLASDI-PLVVIETSRTRVDELRERGVRAVL-GNAANEE---IMQLA---HLECAKWLILT   78 (140)
T ss_dssp             CSCEEEECCSHHHHHHHHHHHHTTC-CEEEEESCHHHHHHHHHTTCEEEE-SCTTSHH---HHHHT---TGGGCSEEEEC
T ss_pred             CCCEEEECcCHHHHHHHHHHHHCCC-CEEEEECCHHHHHHHHHcCCCEEE-CCCCCHH---HHHhc---CcccCCEEEEE
Confidence            4789999999999999999999999 588889999999988888875432 2222222   22221   23578999999


Q ss_pred             CCCHHHHH---HHHHhcccCCEEEEE
Q 017916          262 AGFNKTMS---TALSATRAGGKVCLV  284 (364)
Q Consensus       262 ~g~~~~~~---~~~~~l~~~G~~v~~  284 (364)
                      +++...-.   ...+.+.+..+++..
T Consensus        79 ~~~~~~n~~~~~~a~~~~~~~~iiar  104 (140)
T 3fwz_A           79 IPNGYEAGEIVASARAKNPDIEIIAR  104 (140)
T ss_dssp             CSCHHHHHHHHHHHHHHCSSSEEEEE
T ss_pred             CCChHHHHHHHHHHHHHCCCCeEEEE
Confidence            99654322   344455666666543

>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}

Probab=97.18  E-value=0.00066  Score=56.47  Aligned_cols=134  Identities=15%  Similarity=0.247  Sum_probs=78.7

Q ss_pred             CcceeEEE-ecCCceEECCCCCCccchhhhhhhHHHHHHHHHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEec
Q 017916          136 GSLANQVV-HPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDV  214 (364)
Q Consensus       136 g~~~~~v~-~~~~~~~~lP~~~~~~~aa~~~~~~~a~~~l~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~  214 (364)
                      ..|.+|.. .+....+.+++++++..+.. +........+.. .++++++||-.|+|. |..+..+++ .+...+++++.
T Consensus        16 p~w~~~~~~~~~~~~~~~~~~~~f~~~~~-~~~~~~~~~l~~-~~~~~~~vLDiG~G~-G~~~~~l~~-~~~~~v~~vD~   91 (205)
T 3grz_A           16 PEWEDYQPVFKDQEIIRLDPGLAFGTGNH-QTTQLAMLGIER-AMVKPLTVADVGTGS-GILAIAAHK-LGAKSVLATDI   91 (205)
T ss_dssp             ETTCCCCCSSTTCEEEEESCC-----CCH-HHHHHHHHHHHH-HCSSCCEEEEETCTT-SHHHHHHHH-TTCSEEEEEES
T ss_pred             ccccccccCCCCceeEEecCCcccCCCCC-ccHHHHHHHHHH-hccCCCEEEEECCCC-CHHHHHHHH-CCCCEEEEEEC
Confidence            45666666 66777888887776655431 111111111221 257889999998765 666777766 46668999999


Q ss_pred             ChhHHHHHHH----cCCCe--EEecCCCcccHHHHHHHHHHHcCCCccEEEECCCCH---HHHHHHHHhcccCCEEEEEc
Q 017916          215 DDYRLSVAKE----LGADN--IVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFN---KTMSTALSATRAGGKVCLVG  285 (364)
Q Consensus       215 ~~~~~~~~~~----lg~~~--~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid~~g~~---~~~~~~~~~l~~~G~~v~~g  285 (364)
                      +++..+.+++    .+...  ++.-     ++.+       ...+.+|+|+......   ..+..+.+.|+++|+++...
T Consensus        92 s~~~~~~a~~~~~~~~~~~v~~~~~-----d~~~-------~~~~~fD~i~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~  159 (205)
T 3grz_A           92 SDESMTAAEENAALNGIYDIALQKT-----SLLA-------DVDGKFDLIVANILAEILLDLIPQLDSHLNEDGQVIFSG  159 (205)
T ss_dssp             CHHHHHHHHHHHHHTTCCCCEEEES-----STTT-------TCCSCEEEEEEESCHHHHHHHGGGSGGGEEEEEEEEEEE
T ss_pred             CHHHHHHHHHHHHHcCCCceEEEec-----cccc-------cCCCCceEEEECCcHHHHHHHHHHHHHhcCCCCEEEEEe
Confidence            9988777665    34432  2221     1111       1146799999765422   23455667889999998754

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*

Probab=97.16  E-value=0.0048  Score=53.49  Aligned_cols=104  Identities=17%  Similarity=0.245  Sum_probs=63.9

Q ss_pred             CCCEEEEEcC-CH--HHHHHHHHHHHCCCCEEEEEecChhHHHHHH----HcCC--CeEEecCC-CcccHHHHHHHHHHH
Q 017916          181 PETNVLIMGA-GP--IGLVTMLGARAFGAPRIVIVDVDDYRLSVAK----ELGA--DNIVKVST-NLQDIAEEVEKIQKA  250 (364)
Q Consensus       181 ~g~~VLI~Ga-g~--~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~----~lg~--~~~~~~~~-~~~~~~~~i~~~~~~  250 (364)
                      .+.++||+|+ |.  +|.+.++.+...|+ .|+.++++++..+.++    +++.  ...+..|- ..+++.+.++.+.+.
T Consensus         6 ~~k~vlVTGasg~~GIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~   84 (266)
T 3oig_A            6 EGRNIVVMGVANKRSIAWGIARSLHEAGA-RLIFTYAGERLEKSVHELAGTLDRNDSIILPCDVTNDAEIETCFASIKEQ   84 (266)
T ss_dssp             TTCEEEEECCCSTTSHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHHHTSSSCCCEEEECCCSSSHHHHHHHHHHHHH
T ss_pred             CCCEEEEEcCCCCCcHHHHHHHHHHHCCC-EEEEecCchHHHHHHHHHHHhcCCCCceEEeCCCCCHHHHHHHHHHHHHH
Confidence            4789999987 66  99999998888999 5666666654444333    3332  12222222 223444444444433


Q ss_pred             cCCCccEEEECCCCH--------------H---------------HHHHHHHhcccCCEEEEEcC
Q 017916          251 MGTGIDVSFDCAGFN--------------K---------------TMSTALSATRAGGKVCLVGM  286 (364)
Q Consensus       251 ~~~~~d~vid~~g~~--------------~---------------~~~~~~~~l~~~G~~v~~g~  286 (364)
                      . +++|++|+++|..              +               ..+.++..++++|+++.++.
T Consensus        85 ~-g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS  148 (266)
T 3oig_A           85 V-GVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTEGGSIVTLTY  148 (266)
T ss_dssp             H-SCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEEC
T ss_pred             h-CCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCCCceEEEEec
Confidence            2 4799999988731              1               22344556667899998863

>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}

Probab=97.14  E-value=0.0029  Score=50.95  Aligned_cols=104  Identities=17%  Similarity=0.240  Sum_probs=72.0

Q ss_pred             HHHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHH----cCCC-eEEecCCCcccHHHHHHHHH
Q 017916          174 CRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKE----LGAD-NIVKVSTNLQDIAEEVEKIQ  248 (364)
Q Consensus       174 l~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~----lg~~-~~~~~~~~~~~~~~~i~~~~  248 (364)
                      +....++++++||..|+|. |..+..+++..+...+++++.+++..+.+++    .+.. .+ .+.....+   .+    
T Consensus        18 ~~~~~~~~~~~vldiG~G~-G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~-~~~~d~~~---~~----   88 (178)
T 3hm2_A           18 ISALAPKPHETLWDIGGGS-GSIAIEWLRSTPQTTAVCFEISEERRERILSNAINLGVSDRI-AVQQGAPR---AF----   88 (178)
T ss_dssp             HHHHCCCTTEEEEEESTTT-THHHHHHHTTSSSEEEEEECSCHHHHHHHHHHHHTTTCTTSE-EEECCTTG---GG----
T ss_pred             HHHhcccCCCeEEEeCCCC-CHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHHHHhCCCCCE-EEecchHh---hh----
Confidence            4556788999999999875 8888999988755589999999988877764    3544 33 22111111   11    


Q ss_pred             HHcCCCccEEEECCCC--HHHHHHHHHhcccCCEEEEEcC
Q 017916          249 KAMGTGIDVSFDCAGF--NKTMSTALSATRAGGKVCLVGM  286 (364)
Q Consensus       249 ~~~~~~~d~vid~~g~--~~~~~~~~~~l~~~G~~v~~g~  286 (364)
                      ......+|+|+.....  ...+..+.+.|+++|+++....
T Consensus        89 ~~~~~~~D~i~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~  128 (178)
T 3hm2_A           89 DDVPDNPDVIFIGGGLTAPGVFAAAWKRLPVGGRLVANAV  128 (178)
T ss_dssp             GGCCSCCSEEEECC-TTCTTHHHHHHHTCCTTCEEEEEEC
T ss_pred             hccCCCCCEEEECCcccHHHHHHHHHHhcCCCCEEEEEee
Confidence            1112679999975532  3478899999999999987653

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A

Probab=97.12  E-value=0.0042  Score=53.64  Aligned_cols=104  Identities=18%  Similarity=0.279  Sum_probs=66.2

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHH-HHcCCCe-EEecCCC-cccHHHHHHHHHHHcCCCcc
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KELGADN-IVKVSTN-LQDIAEEVEKIQKAMGTGID  256 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~-~~lg~~~-~~~~~~~-~~~~~~~i~~~~~~~~~~~d  256 (364)
                      .|.++||+|+ +++|.+.++.+...|+ .|+.++++.++.+.+ ++++... .+..+-. .+++.+.++...+. -+++|
T Consensus         7 ~gk~~lVTGas~gIG~a~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~-~g~id   84 (255)
T 4eso_A            7 QGKKAIVIGGTHGMGLATVRRLVEGGA-EVLLTGRNESNIARIREEFGPRVHALRSDIADLNEIAVLGAAAGQT-LGAID   84 (255)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHH-HSSEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHH-hCCCC
Confidence            5789999998 9999999999999999 677777887765544 4454332 2222222 23333333333332 24799


Q ss_pred             EEEECCCC----------HH---------------HHHHHHHhcccCCEEEEEcC
Q 017916          257 VSFDCAGF----------NK---------------TMSTALSATRAGGKVCLVGM  286 (364)
Q Consensus       257 ~vid~~g~----------~~---------------~~~~~~~~l~~~G~~v~~g~  286 (364)
                      ++++++|.          .+               ..+.++..++++|+++.++.
T Consensus        85 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS  139 (255)
T 4eso_A           85 LLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREGGSIVFTSS  139 (255)
T ss_dssp             EEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECC
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCEEEEECC
Confidence            99998873          12               22334455666789998863

>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*

Probab=97.10  E-value=0.00083  Score=57.30  Aligned_cols=104  Identities=21%  Similarity=0.225  Sum_probs=70.6

Q ss_pred             HHHHHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHH----cCCCeEEecCCCcccHHHHHHHH
Q 017916          172 HACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKE----LGADNIVKVSTNLQDIAEEVEKI  247 (364)
Q Consensus       172 ~~l~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~i~~~  247 (364)
                      ..++...++++++||..|+| .|..+..+++..+ ..+++++.+++..+.+++    .+...+....   .+....   +
T Consensus        82 ~~~~~l~~~~~~~vLdiG~G-~G~~~~~la~~~~-~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~---~d~~~~---~  153 (235)
T 1jg1_A           82 IMLEIANLKPGMNILEVGTG-SGWNAALISEIVK-TDVYTIERIPELVEFAKRNLERAGVKNVHVIL---GDGSKG---F  153 (235)
T ss_dssp             HHHHHHTCCTTCCEEEECCT-TSHHHHHHHHHHC-SCEEEEESCHHHHHHHHHHHHHTTCCSEEEEE---SCGGGC---C
T ss_pred             HHHHhcCCCCCCEEEEEeCC-cCHHHHHHHHHhC-CEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEE---CCcccC---C
Confidence            34455678899999999987 5888999999887 479999999887776654    4443321111   111000   1


Q ss_pred             HHHcCCCccEEEECCCCHHHHHHHHHhcccCCEEEEEc
Q 017916          248 QKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVG  285 (364)
Q Consensus       248 ~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g  285 (364)
                      .  ...++|+|+.+.........+.+.|+++|+++..-
T Consensus       154 ~--~~~~fD~Ii~~~~~~~~~~~~~~~L~pgG~lvi~~  189 (235)
T 1jg1_A          154 P--PKAPYDVIIVTAGAPKIPEPLIEQLKIGGKLIIPV  189 (235)
T ss_dssp             G--GGCCEEEEEECSBBSSCCHHHHHTEEEEEEEEEEE
T ss_pred             C--CCCCccEEEECCcHHHHHHHHHHhcCCCcEEEEEE
Confidence            0  12459999987664445567889999999988653

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*

Probab=97.07  E-value=0.008  Score=53.01  Aligned_cols=105  Identities=21%  Similarity=0.190  Sum_probs=65.2

Q ss_pred             CCCCEEEEEcC-CH--HHHHHHHHHHHCCCCEEEEEecChhHHHHH----HHcCCCeEEecCCC-cccHHHHHHHHHHHc
Q 017916          180 GPETNVLIMGA-GP--IGLVTMLGARAFGAPRIVIVDVDDYRLSVA----KELGADNIVKVSTN-LQDIAEEVEKIQKAM  251 (364)
Q Consensus       180 ~~g~~VLI~Ga-g~--~G~~ai~la~~~g~~~vv~~~~~~~~~~~~----~~lg~~~~~~~~~~-~~~~~~~i~~~~~~~  251 (364)
                      -.|.++||+|+ |.  +|.+.++.+...|+ .|+.+.++++..+.+    ++.+-...+..|-. .+++.+.++.+.+. 
T Consensus        29 l~gk~~lVTGasg~~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~-  106 (293)
T 3grk_A           29 LQGKRGLILGVANNRSIAWGIAKAAREAGA-ELAFTYQGDALKKRVEPLAEELGAFVAGHCDVADAASIDAVFETLEKK-  106 (293)
T ss_dssp             TTTCEEEEECCCSSSSHHHHHHHHHHHTTC-EEEEEECSHHHHHHHHHHHHHHTCEEEEECCTTCHHHHHHHHHHHHHH-
T ss_pred             CCCCEEEEEcCCCCCcHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcCCceEEECCCCCHHHHHHHHHHHHHh-
Confidence            35789999987 66  99999999989999 566776665433332    33443233333322 23333444444332 


Q ss_pred             CCCccEEEECCCCH--------------H---------------HHHHHHHhcccCCEEEEEcC
Q 017916          252 GTGIDVSFDCAGFN--------------K---------------TMSTALSATRAGGKVCLVGM  286 (364)
Q Consensus       252 ~~~~d~vid~~g~~--------------~---------------~~~~~~~~l~~~G~~v~~g~  286 (364)
                      -+++|++|+++|..              +               ..+.++..++++|+++.++.
T Consensus       107 ~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~Iv~isS  170 (293)
T 3grk_A          107 WGKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMADGGSILTLTY  170 (293)
T ss_dssp             TSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTTCEEEEEEEC
T ss_pred             cCCCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEee
Confidence            34799999998742              1               33345556677899998863

>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}

Probab=96.98  E-value=0.004  Score=53.57  Aligned_cols=104  Identities=18%  Similarity=0.106  Sum_probs=72.8

Q ss_pred             HHHHcCCCCCCEEEEEcCCHHHHHHHHHHHHCC-CCEEEEEecChhHHHHHHHc-----CCCeEEecCCCcccHHHHHHH
Q 017916          173 ACRRANIGPETNVLIMGAGPIGLVTMLGARAFG-APRIVIVDVDDYRLSVAKEL-----GADNIVKVSTNLQDIAEEVEK  246 (364)
Q Consensus       173 ~l~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g-~~~vv~~~~~~~~~~~~~~l-----g~~~~~~~~~~~~~~~~~i~~  246 (364)
                      .+....++++++||..|+|. |..+..+++.++ ...+++++.+++..+.+++.     |...+.....   ++.+.   
T Consensus        88 ~~~~~~~~~~~~vLdiG~G~-G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g~~~v~~~~~---d~~~~---  160 (258)
T 2pwy_A           88 MVTLLDLAPGMRVLEAGTGS-GGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQVENVRFHLG---KLEEA---  160 (258)
T ss_dssp             HHHHTTCCTTCEEEEECCTT-SHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCCCCEEEEES---CGGGC---
T ss_pred             HHHHcCCCCCCEEEEECCCc-CHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCEEEEEC---chhhc---
Confidence            44667889999999999875 888889998864 34899999999888777653     5332221111   11110   


Q ss_pred             HHHHcCCCccEEEECCCCH-HHHHHHHHhcccCCEEEEEc
Q 017916          247 IQKAMGTGIDVSFDCAGFN-KTMSTALSATRAGGKVCLVG  285 (364)
Q Consensus       247 ~~~~~~~~~d~vid~~g~~-~~~~~~~~~l~~~G~~v~~g  285 (364)
                        ......+|+|+...... ..+..+.+.|+++|+++.+.
T Consensus       161 --~~~~~~~D~v~~~~~~~~~~l~~~~~~L~~gG~l~~~~  198 (258)
T 2pwy_A          161 --ELEEAAYDGVALDLMEPWKVLEKAALALKPDRFLVAYL  198 (258)
T ss_dssp             --CCCTTCEEEEEEESSCGGGGHHHHHHHEEEEEEEEEEE
T ss_pred             --CCCCCCcCEEEECCcCHHHHHHHHHHhCCCCCEEEEEe
Confidence              00124699998765544 78889999999999999875

>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}

Probab=96.95  E-value=0.0014  Score=54.55  Aligned_cols=101  Identities=19%  Similarity=0.159  Sum_probs=68.6

Q ss_pred             HHHHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHH----cCCCeEEecCCCcccHHHHHHHHH
Q 017916          173 ACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKE----LGADNIVKVSTNLQDIAEEVEKIQ  248 (364)
Q Consensus       173 ~l~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~i~~~~  248 (364)
                      .++...++++++||-.|+|. |..+..+++. +. .+++++.+++..+.+++    .+...+.....   +..+..   .
T Consensus        69 ~~~~l~~~~~~~vLdiG~G~-G~~~~~la~~-~~-~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~---d~~~~~---~  139 (210)
T 3lbf_A           69 MTELLELTPQSRVLEIGTGS-GYQTAILAHL-VQ-HVCSVERIKGLQWQARRRLKNLDLHNVSTRHG---DGWQGW---Q  139 (210)
T ss_dssp             HHHHTTCCTTCEEEEECCTT-SHHHHHHHHH-SS-EEEEEESCHHHHHHHHHHHHHTTCCSEEEEES---CGGGCC---G
T ss_pred             HHHhcCCCCCCEEEEEcCCC-CHHHHHHHHh-CC-EEEEEecCHHHHHHHHHHHHHcCCCceEEEEC---CcccCC---c
Confidence            34667889999999999874 7788888887 55 79999999988777664    34432211111   111100   0


Q ss_pred             HHcCCCccEEEECCCCHHHHHHHHHhcccCCEEEEE
Q 017916          249 KAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLV  284 (364)
Q Consensus       249 ~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~  284 (364)
                        ....+|+|+...........+.+.|+++|+++..
T Consensus       140 --~~~~~D~i~~~~~~~~~~~~~~~~L~pgG~lv~~  173 (210)
T 3lbf_A          140 --ARAPFDAIIVTAAPPEIPTALMTQLDEGGILVLP  173 (210)
T ss_dssp             --GGCCEEEEEESSBCSSCCTHHHHTEEEEEEEEEE
T ss_pred             --cCCCccEEEEccchhhhhHHHHHhcccCcEEEEE
Confidence              1357999998655444445788999999998876

>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}

Probab=96.95  E-value=0.0033  Score=51.64  Aligned_cols=101  Identities=19%  Similarity=0.246  Sum_probs=63.6

Q ss_pred             cCCCCCCEEEEEcCCHHHHHHHHHHHHCCC---------CEEEEEecChhHHHHHHHcCCCeEE-ecCCCcccHHHHHHH
Q 017916          177 ANIGPETNVLIMGAGPIGLVTMLGARAFGA---------PRIVIVDVDDYRLSVAKELGADNIV-KVSTNLQDIAEEVEK  246 (364)
Q Consensus       177 ~~~~~g~~VLI~Gag~~G~~ai~la~~~g~---------~~vv~~~~~~~~~~~~~~lg~~~~~-~~~~~~~~~~~~i~~  246 (364)
                      ..++++++||..|+|. |..+..+++..|.         ..+++++.++...     +.-...+ .-+-...++.+.+..
T Consensus        18 ~~~~~~~~vLDlGcG~-G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~~-----~~~~~~~~~~d~~~~~~~~~~~~   91 (196)
T 2nyu_A           18 QILRPGLRVLDCGAAP-GAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIFP-----LEGATFLCPADVTDPRTSQRILE   91 (196)
T ss_dssp             CCCCTTCEEEEETCCS-CHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCCC-----CTTCEEECSCCTTSHHHHHHHHH
T ss_pred             CCCCCCCEEEEeCCCC-CHHHHHHHHHhccccccccCCCceEEEEechhccc-----CCCCeEEEeccCCCHHHHHHHHH
Confidence            4478999999999877 8899999999874         4799999887431     1111222 111111122222222


Q ss_pred             HHHHcCCCccEEEE-----CCCCH------------HHHHHHHHhcccCCEEEEEc
Q 017916          247 IQKAMGTGIDVSFD-----CAGFN------------KTMSTALSATRAGGKVCLVG  285 (364)
Q Consensus       247 ~~~~~~~~~d~vid-----~~g~~------------~~~~~~~~~l~~~G~~v~~g  285 (364)
                      ..  .+..+|+|+.     +.+..            ..+..+.+.|+|+|+++...
T Consensus        92 ~~--~~~~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~  145 (196)
T 2nyu_A           92 VL--PGRRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPGGTFLCKT  145 (196)
T ss_dssp             HS--GGGCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             hc--CCCCCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCEEEEEe
Confidence            11  1347999994     33321            45777899999999998764

>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*

Probab=96.95  E-value=0.0027  Score=58.69  Aligned_cols=92  Identities=22%  Similarity=0.318  Sum_probs=70.0

Q ss_pred             CCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcCCCccE
Q 017916          178 NIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDV  257 (364)
Q Consensus       178 ~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~  257 (364)
                      ..-.|.+|+|.|.|.+|..+++.++.+|+ .|++++.++.+...+...|....        +    +.+.    -...|+
T Consensus       207 ~~L~GktVgIiG~G~IG~~vA~~Lka~Ga-~Viv~D~~p~~a~~A~~~G~~~~--------s----L~ea----l~~ADV  269 (436)
T 3h9u_A          207 VMIAGKTACVCGYGDVGKGCAAALRGFGA-RVVVTEVDPINALQAAMEGYQVL--------L----VEDV----VEEAHI  269 (436)
T ss_dssp             CCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCEEC--------C----HHHH----TTTCSE
T ss_pred             CcccCCEEEEEeeCHHHHHHHHHHHHCCC-EEEEECCChhhhHHHHHhCCeec--------C----HHHH----HhhCCE
Confidence            34478999999999999999999999999 68889888877766666675321        2    2222    246899


Q ss_pred             EEECCCCHHHHH-HHHHhcccCCEEEEEcC
Q 017916          258 SFDCAGFNKTMS-TALSATRAGGKVCLVGM  286 (364)
Q Consensus       258 vid~~g~~~~~~-~~~~~l~~~G~~v~~g~  286 (364)
                      ++.+.+....+. ..++.|+++..++.++.
T Consensus       270 Vilt~gt~~iI~~e~l~~MK~gAIVINvgR  299 (436)
T 3h9u_A          270 FVTTTGNDDIITSEHFPRMRDDAIVCNIGH  299 (436)
T ss_dssp             EEECSSCSCSBCTTTGGGCCTTEEEEECSS
T ss_pred             EEECCCCcCccCHHHHhhcCCCcEEEEeCC
Confidence            999887644444 57888999998888764

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*

Probab=96.94  E-value=0.009  Score=52.77  Aligned_cols=82  Identities=12%  Similarity=0.195  Sum_probs=52.6

Q ss_pred             CCCEEEEEcC-C--HHHHHHHHHHHHCCCCEEEEEecChhHHHHH----HHcCCCeEEecCCC-cccHHHHHHHHHHHcC
Q 017916          181 PETNVLIMGA-G--PIGLVTMLGARAFGAPRIVIVDVDDYRLSVA----KELGADNIVKVSTN-LQDIAEEVEKIQKAMG  252 (364)
Q Consensus       181 ~g~~VLI~Ga-g--~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~----~~lg~~~~~~~~~~-~~~~~~~i~~~~~~~~  252 (364)
                      .+.++||+|+ |  ++|.+.++.+...|+ .|+.++++++..+.+    +..+....+..|-. .+++.+.++.+.+.. 
T Consensus        29 ~~k~vlVTGasg~~GIG~~ia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~-  106 (296)
T 3k31_A           29 EGKKGVIIGVANDKSLAWGIAKAVCAQGA-EVALTYLSETFKKRVDPLAESLGVKLTVPCDVSDAESVDNMFKVLAEEW-  106 (296)
T ss_dssp             TTCEEEEECCCSTTSHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred             CCCEEEEEeCCCCCCHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHHc-
Confidence            5789999997 5  899999998889999 577777766443333    33454344433322 233444444443333 


Q ss_pred             CCccEEEECCCC
Q 017916          253 TGIDVSFDCAGF  264 (364)
Q Consensus       253 ~~~d~vid~~g~  264 (364)
                      +++|++|+++|.
T Consensus       107 g~iD~lVnnAG~  118 (296)
T 3k31_A          107 GSLDFVVHAVAF  118 (296)
T ss_dssp             SCCSEEEECCCC
T ss_pred             CCCCEEEECCCc
Confidence            479999999873

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}

Probab=96.93  E-value=0.008  Score=52.23  Aligned_cols=105  Identities=16%  Similarity=0.220  Sum_probs=63.3

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHH----HHcCCCe-EEecCCC-cccHHHHHHHHHHHcCC
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA----KELGADN-IVKVSTN-LQDIAEEVEKIQKAMGT  253 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~----~~lg~~~-~~~~~~~-~~~~~~~i~~~~~~~~~  253 (364)
                      .+.++||+|+ +++|.+.++.+...|+++++...++.++.+.+    +..+... .+..|-. .+++.+.++.+.+.. +
T Consensus        26 ~~k~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~-g  104 (267)
T 3u5t_A           26 TNKVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAGGKALTAQADVSDPAAVRRLFATAEEAF-G  104 (267)
T ss_dssp             -CCEEEEESCSSHHHHHHHHHHHHHTCEEEEEESSCSHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH-S
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHc-C
Confidence            5789999998 99999999988888995444434454443322    3334332 2222222 233333444443322 4


Q ss_pred             CccEEEECCCCH----------H---------------HHHHHHHhcccCCEEEEEcC
Q 017916          254 GIDVSFDCAGFN----------K---------------TMSTALSATRAGGKVCLVGM  286 (364)
Q Consensus       254 ~~d~vid~~g~~----------~---------------~~~~~~~~l~~~G~~v~~g~  286 (364)
                      ++|++|+++|..          +               ..+.++..++++|+++.++.
T Consensus       105 ~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS  162 (267)
T 3u5t_A          105 GVDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRVGGRIINMST  162 (267)
T ss_dssp             CEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECC
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeEEEEeC
Confidence            799999998731          1               23455666777899998863

>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}

Probab=96.91  E-value=0.01  Score=45.94  Aligned_cols=77  Identities=13%  Similarity=0.201  Sum_probs=55.5

Q ss_pred             CCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcCCCccEEEEC
Q 017916          182 ETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDC  261 (364)
Q Consensus       182 g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid~  261 (364)
                      ..+|+|.|+|.+|...++.+...|. .|++++.++++.+.+++.+... +.-+..++   +.+++.   .-.++|++|.+
T Consensus         6 ~~~v~I~G~G~iG~~la~~L~~~g~-~V~~id~~~~~~~~~~~~~~~~-~~gd~~~~---~~l~~~---~~~~~d~vi~~   77 (141)
T 3llv_A            6 RYEYIVIGSEAAGVGLVRELTAAGK-KVLAVDKSKEKIELLEDEGFDA-VIADPTDE---SFYRSL---DLEGVSAVLIT   77 (141)
T ss_dssp             CCSEEEECCSHHHHHHHHHHHHTTC-CEEEEESCHHHHHHHHHTTCEE-EECCTTCH---HHHHHS---CCTTCSEEEEC
T ss_pred             CCEEEEECCCHHHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHCCCcE-EECCCCCH---HHHHhC---CcccCCEEEEe
Confidence            4689999999999999999999999 5788889999888888777543 22222222   222221   23579999999


Q ss_pred             CCCHH
Q 017916          262 AGFNK  266 (364)
Q Consensus       262 ~g~~~  266 (364)
                      +++.+
T Consensus        78 ~~~~~   82 (141)
T 3llv_A           78 GSDDE   82 (141)
T ss_dssp             CSCHH
T ss_pred             cCCHH
Confidence            99643

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}

Probab=96.87  E-value=0.015  Score=48.49  Aligned_cols=91  Identities=15%  Similarity=0.254  Sum_probs=60.4

Q ss_pred             EEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcCCCccEEEECC
Q 017916          184 NVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCA  262 (364)
Q Consensus       184 ~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid~~  262 (364)
                      +|||+|+ |.+|...++.+...|. .|++++++.++.+.+. -++. ++..+-.+.+.    +.+     .++|++|.++
T Consensus         2 kvlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~-~~~~-~~~~D~~d~~~----~~~-----~~~d~vi~~a   69 (221)
T 3ew7_A            2 KIGIIGATGRAGSRILEEAKNRGH-EVTAIVRNAGKITQTH-KDIN-ILQKDIFDLTL----SDL-----SDQNVVVDAY   69 (221)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCSHHHHHHC-SSSE-EEECCGGGCCH----HHH-----TTCSEEEECC
T ss_pred             eEEEEcCCchhHHHHHHHHHhCCC-EEEEEEcCchhhhhcc-CCCe-EEeccccChhh----hhh-----cCCCEEEECC
Confidence            6999998 9999999999999998 6777778777655443 2332 22222222222    222     4799999999


Q ss_pred             CCH--------HHHHHHHHhcccC--CEEEEEcC
Q 017916          263 GFN--------KTMSTALSATRAG--GKVCLVGM  286 (364)
Q Consensus       263 g~~--------~~~~~~~~~l~~~--G~~v~~g~  286 (364)
                      |..        .....+++.++..  ++++.++.
T Consensus        70 g~~~~~~~~~~~~~~~l~~a~~~~~~~~~v~~SS  103 (221)
T 3ew7_A           70 GISPDEAEKHVTSLDHLISVLNGTVSPRLLVVGG  103 (221)
T ss_dssp             CSSTTTTTSHHHHHHHHHHHHCSCCSSEEEEECC
T ss_pred             cCCccccchHHHHHHHHHHHHHhcCCceEEEEec
Confidence            853        3445667777654  68887753

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}

Probab=96.87  E-value=0.019  Score=49.89  Aligned_cols=104  Identities=16%  Similarity=0.313  Sum_probs=64.5

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEE-ecChhHHHH----HHHcCCCe-EEecCC-CcccHHHHHHHHHHHcC
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIV-DVDDYRLSV----AKELGADN-IVKVST-NLQDIAEEVEKIQKAMG  252 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~-~~~~~~~~~----~~~lg~~~-~~~~~~-~~~~~~~~i~~~~~~~~  252 (364)
                      .|.++||+|+ +++|.+.++.+...|++ |+.+ ..+.++.+.    +++.+... .+..+- ..+++.+.++++.+.. 
T Consensus        30 ~gk~~lVTGas~GIG~aia~~la~~G~~-V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~-  107 (271)
T 3v2g_A           30 AGKTAFVTGGSRGIGAAIAKRLALEGAA-VALTYVNAAERAQAVVSEIEQAGGRAVAIRADNRDAEAIEQAIRETVEAL-  107 (271)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCE-EEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCE-EEEEeCCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc-
Confidence            5789999998 99999999999999995 5555 444444332    23335432 222222 2233444444444333 


Q ss_pred             CCccEEEECCCCH----------H---------------HHHHHHHhcccCCEEEEEcC
Q 017916          253 TGIDVSFDCAGFN----------K---------------TMSTALSATRAGGKVCLVGM  286 (364)
Q Consensus       253 ~~~d~vid~~g~~----------~---------------~~~~~~~~l~~~G~~v~~g~  286 (364)
                      +++|++|+++|..          +               ..+.++..|+++|+++.++.
T Consensus       108 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~g~iv~isS  166 (271)
T 3v2g_A          108 GGLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDGGRIITIGS  166 (271)
T ss_dssp             SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECC
T ss_pred             CCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEeC
Confidence            4799999998731          1               33445566777899998863

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A

Probab=96.86  E-value=0.013  Score=50.96  Aligned_cols=105  Identities=18%  Similarity=0.291  Sum_probs=64.9

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHH----HHHcCCCe-EEecCC-CcccHHHHHHHHHHHcCC
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSV----AKELGADN-IVKVST-NLQDIAEEVEKIQKAMGT  253 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~----~~~lg~~~-~~~~~~-~~~~~~~~i~~~~~~~~~  253 (364)
                      .|.++||+|+ +++|.+.++.+...|+++++....+.++.+.    ++..+... .+..|- ..+++.+.++.+.+.. +
T Consensus        17 ~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-g   95 (270)
T 3is3_A           17 DGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIAIKADIRQVPEIVKLFDQAVAHF-G   95 (270)
T ss_dssp             TTCEEEESCTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH-S
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc-C
Confidence            5789999998 9999999999999999544434344443332    23345432 222222 2233444444443333 4


Q ss_pred             CccEEEECCCC----------HH---------------HHHHHHHhcccCCEEEEEcC
Q 017916          254 GIDVSFDCAGF----------NK---------------TMSTALSATRAGGKVCLVGM  286 (364)
Q Consensus       254 ~~d~vid~~g~----------~~---------------~~~~~~~~l~~~G~~v~~g~  286 (364)
                      ++|++|+++|.          .+               ..+.++..+.++|+++.++.
T Consensus        96 ~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS  153 (270)
T 3is3_A           96 HLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVLTSS  153 (270)
T ss_dssp             CCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECC
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEEEeC
Confidence            79999998873          11               33456667778899998874

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2

Probab=96.84  E-value=0.0093  Score=51.39  Aligned_cols=81  Identities=22%  Similarity=0.272  Sum_probs=53.3

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCC-cccHHHHHHHHHHHcCCCccEE
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTN-LQDIAEEVEKIQKAMGTGIDVS  258 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~-~~~~~~~i~~~~~~~~~~~d~v  258 (364)
                      .+.++||+|+ |.+|.+.++.+...|+ .|+.++++.++.+..++++. ..+..|-. .+++.+.++...... +++|++
T Consensus         5 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~-~~~~~D~~~~~~~~~~~~~~~~~~-g~iD~l   81 (256)
T 2d1y_A            5 AGKGVLVTGGARGIGRAIAQAFAREGA-LVALCDLRPEGKEVAEAIGG-AFFQVDLEDERERVRFVEEAAYAL-GRVDVL   81 (256)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSTTHHHHHHHHTC-EEEECCTTCHHHHHHHHHHHHHHH-SCCCEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHhhC-CEEEeeCCCHHHHHHHHHHHHHHc-CCCCEE
Confidence            4678999998 9999999999989999 56777777666445555542 33333322 233444444443322 479999


Q ss_pred             EECCCC
Q 017916          259 FDCAGF  264 (364)
Q Consensus       259 id~~g~  264 (364)
                      |+++|.
T Consensus        82 v~~Ag~   87 (256)
T 2d1y_A           82 VNNAAI   87 (256)
T ss_dssp             EECCCC
T ss_pred             EECCCC
Confidence            999873

>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}

Probab=96.82  E-value=0.0025  Score=53.24  Aligned_cols=105  Identities=21%  Similarity=0.246  Sum_probs=70.9

Q ss_pred             HHHHHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCC-CEEEEEecChhHHHHHHH----cCCCeEEecCCCcccHHHHHHH
Q 017916          172 HACRRANIGPETNVLIMGAGPIGLVTMLGARAFGA-PRIVIVDVDDYRLSVAKE----LGADNIVKVSTNLQDIAEEVEK  246 (364)
Q Consensus       172 ~~l~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~-~~vv~~~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~i~~  246 (364)
                      ..++...++++++||..|+|. |..+..+++..|. ..+++++.+++..+.+++    .+...+.....   +.....  
T Consensus        68 ~~~~~~~~~~~~~vLdiG~G~-G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~---d~~~~~--  141 (215)
T 2yxe_A           68 MMCELLDLKPGMKVLEIGTGC-GYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKLGYDNVIVIVG---DGTLGY--  141 (215)
T ss_dssp             HHHHHTTCCTTCEEEEECCTT-SHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHTCTTEEEEES---CGGGCC--
T ss_pred             HHHHhhCCCCCCEEEEECCCc-cHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEEC---CcccCC--
Confidence            344667788999999999874 8888899988762 379999999988777654    34332211111   111000  


Q ss_pred             HHHHcCCCccEEEECCCCHHHHHHHHHhcccCCEEEEEc
Q 017916          247 IQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVG  285 (364)
Q Consensus       247 ~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g  285 (364)
                       .  ....+|+|+.+.........+.+.|+++|+++..-
T Consensus       142 -~--~~~~fD~v~~~~~~~~~~~~~~~~L~pgG~lv~~~  177 (215)
T 2yxe_A          142 -E--PLAPYDRIYTTAAGPKIPEPLIRQLKDGGKLLMPV  177 (215)
T ss_dssp             -G--GGCCEEEEEESSBBSSCCHHHHHTEEEEEEEEEEE
T ss_pred             -C--CCCCeeEEEECCchHHHHHHHHHHcCCCcEEEEEE
Confidence             0  13579999987654444568899999999988763

>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A

Probab=96.80  E-value=0.023  Score=48.92  Aligned_cols=81  Identities=16%  Similarity=0.265  Sum_probs=52.3

Q ss_pred             CCCEEEEEcC-C--HHHHHHHHHHHHCCCCEEEEEecChhHHHHH----HHcCCC--eEEecC-CCcccHHHHHHHHHHH
Q 017916          181 PETNVLIMGA-G--PIGLVTMLGARAFGAPRIVIVDVDDYRLSVA----KELGAD--NIVKVS-TNLQDIAEEVEKIQKA  250 (364)
Q Consensus       181 ~g~~VLI~Ga-g--~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~----~~lg~~--~~~~~~-~~~~~~~~~i~~~~~~  250 (364)
                      +|.++||+|+ |  ++|.+.++.+...|+ .|+.+++++++.+.+    ++++..  ..+..| ...++..+.+....+.
T Consensus         5 ~gK~alVTGaa~~~GIG~aiA~~la~~Ga-~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   83 (256)
T 4fs3_A            5 ENKTYVIMGIANKRSIAFGVAKVLDQLGA-KLVFTYRKERSRKELEKLLEQLNQPEAHLYQIDVQSDEEVINGFEQIGKD   83 (256)
T ss_dssp             TTCEEEEECCCSTTCHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHHGGGTCSSCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCCchHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            5789999997 5  799999999999999 577777776654433    334432  222222 2223444444444433


Q ss_pred             cCCCccEEEECCC
Q 017916          251 MGTGIDVSFDCAG  263 (364)
Q Consensus       251 ~~~~~d~vid~~g  263 (364)
                      . +++|++++++|
T Consensus        84 ~-G~iD~lvnnAg   95 (256)
T 4fs3_A           84 V-GNIDGVYHSIA   95 (256)
T ss_dssp             H-CCCSEEEECCC
T ss_pred             h-CCCCEEEeccc
Confidence            3 47999999877

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*

Probab=96.79  E-value=0.026  Score=49.31  Aligned_cols=104  Identities=21%  Similarity=0.316  Sum_probs=63.4

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhH-HH----HHHHcCCCe-EEecCC-CcccHHHHHHHHHHHcC
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYR-LS----VAKELGADN-IVKVST-NLQDIAEEVEKIQKAMG  252 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~-~~----~~~~lg~~~-~~~~~~-~~~~~~~~i~~~~~~~~  252 (364)
                      .+.++||+|+ |.+|.+.++.+...|+ .|++++++.++ .+    .+++.+... .+..+- ..+++.+.+..+.+.. 
T Consensus        28 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-  105 (283)
T 1g0o_A           28 EGKVALVTGAGRGIGREMAMELGRRGC-KVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKIF-  105 (283)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCchHHHHHHHHHHHHhCCCeEEEEcCCCCHHHHHHHHHHHHHHc-
Confidence            4688999998 9999999999999999 46666555432 22    223345332 222221 1233333344333322 


Q ss_pred             CCccEEEECCCCH----------H---------------HHHHHHHhcccCCEEEEEcC
Q 017916          253 TGIDVSFDCAGFN----------K---------------TMSTALSATRAGGKVCLVGM  286 (364)
Q Consensus       253 ~~~d~vid~~g~~----------~---------------~~~~~~~~l~~~G~~v~~g~  286 (364)
                      +++|++|+++|..          +               ..+.++..|+..|+++.++.
T Consensus       106 g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS  164 (283)
T 1g0o_A          106 GKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGS  164 (283)
T ss_dssp             SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECC
T ss_pred             CCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCeEEEEec
Confidence            4799999998731          1               22445566666799998863

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A

Probab=96.77  E-value=0.015  Score=49.53  Aligned_cols=77  Identities=25%  Similarity=0.288  Sum_probs=52.1

Q ss_pred             CCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcCCCccEEEE
Q 017916          182 ETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  260 (364)
Q Consensus       182 g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid  260 (364)
                      +.++||+|+ |.+|.+.++.+...|+ .|+.++++.++  ..+++++ ..+..+-.+++..+.+++..+.. +++|++|+
T Consensus         2 ~k~vlVTGas~giG~~~a~~l~~~G~-~V~~~~r~~~~--~~~~~~~-~~~~~D~~~~~~~~~~~~~~~~~-g~id~lv~   76 (239)
T 2ekp_A            2 ERKALVTGGSRGIGRAIAEALVARGY-RVAIASRNPEE--AAQSLGA-VPLPTDLEKDDPKGLVKRALEAL-GGLHVLVH   76 (239)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCHH--HHHHHTC-EEEECCTTTSCHHHHHHHHHHHH-TSCCEEEE
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHH--HHHhhCc-EEEecCCchHHHHHHHHHHHHHc-CCCCEEEE
Confidence            468999998 9999999999999999 56777776655  3445563 22322222245555555544333 47999999


Q ss_pred             CCC
Q 017916          261 CAG  263 (364)
Q Consensus       261 ~~g  263 (364)
                      ++|
T Consensus        77 ~Ag   79 (239)
T 2ekp_A           77 AAA   79 (239)
T ss_dssp             CCC
T ss_pred             CCC
Confidence            987

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*

Probab=96.77  E-value=0.02  Score=50.29  Aligned_cols=104  Identities=18%  Similarity=0.241  Sum_probs=63.4

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChh-HHHH----HHHcCCCe-EEecCC-CcccHHHHHHHHHHHcC
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDY-RLSV----AKELGADN-IVKVST-NLQDIAEEVEKIQKAMG  252 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~-~~~~----~~~lg~~~-~~~~~~-~~~~~~~~i~~~~~~~~  252 (364)
                      .|.++||+|+ +++|.+.++.+...|+ .|++++++.+ ..+.    ++..+... .+..|- ..+++.+.++++.+.. 
T Consensus        46 ~gk~vlVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~-  123 (291)
T 3ijr_A           46 KGKNVLITGGDSGIGRAVSIAFAKEGA-NIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSDEQHCKDIVQETVRQL-  123 (291)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHTTTCCEEEEESCTTSHHHHHHHHHHHHHHH-
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCchHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc-
Confidence            5789999998 9999999999999999 4666655543 2222    23334332 222222 2233344444443333 


Q ss_pred             CCccEEEECCCCH-----------H---------------HHHHHHHhcccCCEEEEEcC
Q 017916          253 TGIDVSFDCAGFN-----------K---------------TMSTALSATRAGGKVCLVGM  286 (364)
Q Consensus       253 ~~~d~vid~~g~~-----------~---------------~~~~~~~~l~~~G~~v~~g~  286 (364)
                      +++|++|+++|..           +               ..+.++..++++|+++.++.
T Consensus       124 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv~isS  183 (291)
T 3ijr_A          124 GSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIINTAS  183 (291)
T ss_dssp             SSCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEEEECC
T ss_pred             CCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEEEEec
Confidence            4799999987631           1               23345556667899998863

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}

Probab=96.75  E-value=0.021  Score=49.19  Aligned_cols=104  Identities=24%  Similarity=0.384  Sum_probs=67.1

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHH----HHHcCCCeE-EecC-CCcccHHHHHHHHHHHcCC
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSV----AKELGADNI-VKVS-TNLQDIAEEVEKIQKAMGT  253 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~----~~~lg~~~~-~~~~-~~~~~~~~~i~~~~~~~~~  253 (364)
                      +|.++||+|+ +++|.+.++.+...|+ .|+.+++++++.+.    +++.|.... +..| ...++..+.+++..+. -+
T Consensus         8 ~gKvalVTGas~GIG~aia~~la~~Ga-~Vvi~~~~~~~~~~~~~~l~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~-~G   85 (255)
T 4g81_D            8 TGKTALVTGSARGLGFAYAEGLAAAGA-RVILNDIRATLLAESVDTLTRKGYDAHGVAFDVTDELAIEAAFSKLDAE-GI   85 (255)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHT-TC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHH-CC
Confidence            5889999987 9999999999999999 67778887765432    233454322 1112 1223444444444433 35


Q ss_pred             CccEEEECCCCH----------H---------------HHHHHHHhc---ccCCEEEEEcC
Q 017916          254 GIDVSFDCAGFN----------K---------------TMSTALSAT---RAGGKVCLVGM  286 (364)
Q Consensus       254 ~~d~vid~~g~~----------~---------------~~~~~~~~l---~~~G~~v~~g~  286 (364)
                      ++|++++++|..          +               ..+.++..|   +.+|+++.++.
T Consensus        86 ~iDiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~~G~IVnisS  146 (255)
T 4g81_D           86 HVDILINNAGIQYRKPMVELELENWQKVIDTNLTSAFLVSRSAAKRMIARNSGGKIINIGS  146 (255)
T ss_dssp             CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECC
T ss_pred             CCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHccCCCEEEEEee
Confidence            799999998742          1               334455566   24689998873

>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*

Probab=96.73  E-value=0.008  Score=51.62  Aligned_cols=103  Identities=22%  Similarity=0.251  Sum_probs=72.5

Q ss_pred             HHHHcCCCCCCEEEEEcCCHHHHHHHHHHHHCC-CCEEEEEecChhHHHHHHH----cCCCe-EEecCCCcccHHHHHHH
Q 017916          173 ACRRANIGPETNVLIMGAGPIGLVTMLGARAFG-APRIVIVDVDDYRLSVAKE----LGADN-IVKVSTNLQDIAEEVEK  246 (364)
Q Consensus       173 ~l~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g-~~~vv~~~~~~~~~~~~~~----lg~~~-~~~~~~~~~~~~~~i~~  246 (364)
                      .+....++++++||-.|+|. |..+..+++.++ ...+++++.+++..+.+++    .|... +....   .|+.+.   
T Consensus        85 i~~~~~~~~~~~vldiG~G~-G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~v~~~~---~d~~~~---  157 (255)
T 3mb5_A           85 IVAYAGISPGDFIVEAGVGS-GALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAGFDDRVTIKL---KDIYEG---  157 (255)
T ss_dssp             HHHHTTCCTTCEEEEECCTT-SHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHTCTTTEEEEC---SCGGGC---
T ss_pred             HHHhhCCCCCCEEEEecCCc-hHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcCCCCceEEEE---Cchhhc---
Confidence            34667889999999999876 888889998853 4489999999988777664    35433 22111   121111   


Q ss_pred             HHHHcCCCccEEEECCCCH-HHHHHHHHhcccCCEEEEEc
Q 017916          247 IQKAMGTGIDVSFDCAGFN-KTMSTALSATRAGGKVCLVG  285 (364)
Q Consensus       247 ~~~~~~~~~d~vid~~g~~-~~~~~~~~~l~~~G~~v~~g  285 (364)
                         .....+|+|+.....+ ..+..+.+.|+++|+++.+.
T Consensus       158 ---~~~~~~D~v~~~~~~~~~~l~~~~~~L~~gG~l~~~~  194 (255)
T 3mb5_A          158 ---IEEENVDHVILDLPQPERVVEHAAKALKPGGFFVAYT  194 (255)
T ss_dssp             ---CCCCSEEEEEECSSCGGGGHHHHHHHEEEEEEEEEEE
T ss_pred             ---cCCCCcCEEEECCCCHHHHHHHHHHHcCCCCEEEEEE
Confidence               0134699999766644 47889999999999998874

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}

Probab=96.73  E-value=0.0073  Score=51.21  Aligned_cols=96  Identities=19%  Similarity=0.198  Sum_probs=63.1

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcCCCccEEE
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF  259 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vi  259 (364)
                      .+.+|||+|+ |.+|...++.+...|+ .|++++++.++.+.+...++..++..+-. +++    .+.    -+++|++|
T Consensus        20 ~~~~ilVtGatG~iG~~l~~~L~~~G~-~V~~~~R~~~~~~~~~~~~~~~~~~~Dl~-~~~----~~~----~~~~D~vi   89 (236)
T 3e8x_A           20 QGMRVLVVGANGKVARYLLSELKNKGH-EPVAMVRNEEQGPELRERGASDIVVANLE-EDF----SHA----FASIDAVV   89 (236)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHTTCSEEEECCTT-SCC----GGG----GTTCSEEE
T ss_pred             CCCeEEEECCCChHHHHHHHHHHhCCC-eEEEEECChHHHHHHHhCCCceEEEcccH-HHH----HHH----HcCCCEEE
Confidence            4789999998 9999999999999999 67888888888777766666223322221 221    111    24799999


Q ss_pred             ECCCCH-------------HHHHHHHHhccc--CCEEEEEcC
Q 017916          260 DCAGFN-------------KTMSTALSATRA--GGKVCLVGM  286 (364)
Q Consensus       260 d~~g~~-------------~~~~~~~~~l~~--~G~~v~~g~  286 (364)
                      +++|..             .....+++.++.  .++++.++.
T Consensus        90 ~~ag~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS  131 (236)
T 3e8x_A           90 FAAGSGPHTGADKTILIDLWGAIKTIQEAEKRGIKRFIMVSS  131 (236)
T ss_dssp             ECCCCCTTSCHHHHHHTTTHHHHHHHHHHHHHTCCEEEEECC
T ss_pred             ECCCCCCCCCccccchhhHHHHHHHHHHHHHcCCCEEEEEec
Confidence            998842             112234444432  368888764

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0

Probab=96.69  E-value=0.0095  Score=50.66  Aligned_cols=81  Identities=16%  Similarity=0.202  Sum_probs=52.5

Q ss_pred             CCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHH-HHcCCC-eEEecCC-CcccHHHHHHHHHHHcCCCccE
Q 017916          182 ETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KELGAD-NIVKVST-NLQDIAEEVEKIQKAMGTGIDV  257 (364)
Q Consensus       182 g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~-~~lg~~-~~~~~~~-~~~~~~~~i~~~~~~~~~~~d~  257 (364)
                      +.++||+|+ +++|.+.++.+...|+ .|+.++++.++.+.+ ++++.. ..+..|- ..+++.+.++...+.. +++|+
T Consensus         3 ~k~vlVTGas~GIG~a~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~-g~id~   80 (235)
T 3l6e_A            3 LGHIIVTGAGSGLGRALTIGLVERGH-QVSMMGRRYQRLQQQELLLGNAVIGIVADLAHHEDVDVAFAAAVEWG-GLPEL   80 (235)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHGGGEEEEECCTTSHHHHHHHHHHHHHHH-CSCSE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhcCCceEEECCCCCHHHHHHHHHHHHHhc-CCCcE
Confidence            568999998 9999999999989999 577777887765544 334322 1222221 2233444444443332 47999


Q ss_pred             EEECCCC
Q 017916          258 SFDCAGF  264 (364)
Q Consensus       258 vid~~g~  264 (364)
                      +|+++|.
T Consensus        81 lvnnAg~   87 (235)
T 3l6e_A           81 VLHCAGT   87 (235)
T ss_dssp             EEEECCC
T ss_pred             EEECCCC
Confidence            9998874

>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}

Probab=96.68  E-value=0.0094  Score=50.75  Aligned_cols=105  Identities=21%  Similarity=0.271  Sum_probs=69.8

Q ss_pred             CCCCCCEEEEEcCCHHHHHHHHHHHHCC-CCEEEEEecChhHHHHHHH----cCCCeEEecCCCcccHHHHHHHHHHH--
Q 017916          178 NIGPETNVLIMGAGPIGLVTMLGARAFG-APRIVIVDVDDYRLSVAKE----LGADNIVKVSTNLQDIAEEVEKIQKA--  250 (364)
Q Consensus       178 ~~~~g~~VLI~Gag~~G~~ai~la~~~g-~~~vv~~~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~i~~~~~~--  250 (364)
                      ...++++||..|+|. |..+..+++..+ ...+++++.+++..+.+++    .|....+.+.  ..+..+.+..+...  
T Consensus        57 ~~~~~~~VLdiG~G~-G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~v~~~--~~d~~~~~~~~~~~~~  133 (239)
T 2hnk_A           57 KISGAKRIIEIGTFT-GYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENGLENKIFLK--LGSALETLQVLIDSKS  133 (239)
T ss_dssp             HHHTCSEEEEECCTT-CHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEE--ESCHHHHHHHHHHCSS
T ss_pred             HhhCcCEEEEEeCCC-CHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCEEEE--ECCHHHHHHHHHhhcc
Confidence            345788999999874 888899999874 3489999999988777665    3543211111  12333333322210  


Q ss_pred             --------c-C-CCccEEEECCCCH---HHHHHHHHhcccCCEEEEEc
Q 017916          251 --------M-G-TGIDVSFDCAGFN---KTMSTALSATRAGGKVCLVG  285 (364)
Q Consensus       251 --------~-~-~~~d~vid~~g~~---~~~~~~~~~l~~~G~~v~~g  285 (364)
                              . + ..+|+|+......   ..+..+.+.|+++|.++...
T Consensus       134 ~~~~~~~f~~~~~~fD~I~~~~~~~~~~~~l~~~~~~L~pgG~lv~~~  181 (239)
T 2hnk_A          134 APSWASDFAFGPSSIDLFFLDADKENYPNYYPLILKLLKPGGLLIADN  181 (239)
T ss_dssp             CCGGGTTTCCSTTCEEEEEECSCGGGHHHHHHHHHHHEEEEEEEEEEC
T ss_pred             cccccccccCCCCCcCEEEEeCCHHHHHHHHHHHHHHcCCCeEEEEEc
Confidence                    0 1 5799999776543   56688999999999998754

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}

Probab=96.67  E-value=0.019  Score=49.49  Aligned_cols=82  Identities=16%  Similarity=0.222  Sum_probs=49.5

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHH----HHHcCCC-eEEecCC-CcccHHHHHHHHHHHcCC
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSV----AKELGAD-NIVKVST-NLQDIAEEVEKIQKAMGT  253 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~----~~~lg~~-~~~~~~~-~~~~~~~~i~~~~~~~~~  253 (364)
                      .|.++||+|+ +++|.+.++.+...|+++++....+.++.+.    +++.+.. ..+..|- ..+++.+.++++.+.. +
T Consensus         7 ~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-g   85 (259)
T 3edm_A            7 TNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLGRSALAIKADLTNAAEVEAAISAAADKF-G   85 (259)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHHTTTSCCEEEECCTTCHHHHHHHHHHHHHHH-C
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHh-C
Confidence            4789999998 9999999999999999544443555444332    2233432 2222222 2233444444443332 4


Q ss_pred             CccEEEECCC
Q 017916          254 GIDVSFDCAG  263 (364)
Q Consensus       254 ~~d~vid~~g  263 (364)
                      ++|++|+++|
T Consensus        86 ~id~lv~nAg   95 (259)
T 3edm_A           86 EIHGLVHVAG   95 (259)
T ss_dssp             SEEEEEECCC
T ss_pred             CCCEEEECCC
Confidence            7999999886

>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*

Probab=96.65  E-value=0.0081  Score=53.53  Aligned_cols=100  Identities=12%  Similarity=0.227  Sum_probs=70.2

Q ss_pred             HHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHc----CCCeEEecCCCcccHHHHHHHHHHH
Q 017916          175 RRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKEL----GADNIVKVSTNLQDIAEEVEKIQKA  250 (364)
Q Consensus       175 ~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~l----g~~~~~~~~~~~~~~~~~i~~~~~~  250 (364)
                      +...++++++||-.|+|. |..+..+++..|+ .+++++.+++..+.+++.    |...-+.+..  .++.    .+   
T Consensus        84 ~~~~~~~~~~vLDiGcG~-G~~~~~la~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~--~d~~----~~---  152 (318)
T 2fk8_A           84 DKLDLKPGMTLLDIGCGW-GTTMRRAVERFDV-NVIGLTLSKNQHARCEQVLASIDTNRSRQVLL--QGWE----DF---  152 (318)
T ss_dssp             TTSCCCTTCEEEEESCTT-SHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHTSCCSSCEEEEE--SCGG----GC---
T ss_pred             HhcCCCCcCEEEEEcccc-hHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCCceEEEE--CChH----HC---
Confidence            556788999999999866 7888889988788 799999999888877653    3321111111  1111    11   


Q ss_pred             cCCCccEEEEC-----CCC---HHHHHHHHHhcccCCEEEEEcC
Q 017916          251 MGTGIDVSFDC-----AGF---NKTMSTALSATRAGGKVCLVGM  286 (364)
Q Consensus       251 ~~~~~d~vid~-----~g~---~~~~~~~~~~l~~~G~~v~~g~  286 (364)
                       .+.+|+|+..     .+.   ...+..+.+.|+|+|+++....
T Consensus       153 -~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~  195 (318)
T 2fk8_A          153 -AEPVDRIVSIEAFEHFGHENYDDFFKRCFNIMPADGRMTVQSS  195 (318)
T ss_dssp             -CCCCSEEEEESCGGGTCGGGHHHHHHHHHHHSCTTCEEEEEEE
T ss_pred             -CCCcCEEEEeChHHhcCHHHHHHHHHHHHHhcCCCcEEEEEEe
Confidence             2579999875     332   4577888999999999987653

>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*

Probab=96.64  E-value=0.015  Score=49.84  Aligned_cols=80  Identities=19%  Similarity=0.207  Sum_probs=53.9

Q ss_pred             CEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCC-eEEecC-CCcccHHHHHHHHHHHcCCCccEEE
Q 017916          183 TNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGAD-NIVKVS-TNLQDIAEEVEKIQKAMGTGIDVSF  259 (364)
Q Consensus       183 ~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~-~~~~~~-~~~~~~~~~i~~~~~~~~~~~d~vi  259 (364)
                      .+|||+|+ +++|.+.++.+...|+ .|+.++.++++.+.+.+-+.. ..+..| ...++..+.+++..+.. +++|+++
T Consensus         3 K~vlVTGas~GIG~aia~~la~~Ga-~V~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~-g~iDiLV   80 (247)
T 3ged_A            3 RGVIVTGGGHGIGKQICLDFLEAGD-KVCFIDIDEKRSADFAKERPNLFYFHGDVADPLTLKKFVEYAMEKL-QRIDVLV   80 (247)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHTTCTTEEEEECCTTSHHHHHHHHHHHHHHH-SCCCEEE
T ss_pred             CEEEEecCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhcCCEEEEEecCCCHHHHHHHHHHHHHHc-CCCCEEE
Confidence            68999987 9999999999999999 678888888776655443332 222222 22234444444444333 4799999


Q ss_pred             ECCCC
Q 017916          260 DCAGF  264 (364)
Q Consensus       260 d~~g~  264 (364)
                      +++|.
T Consensus        81 NNAG~   85 (247)
T 3ged_A           81 NNACR   85 (247)
T ss_dssp             ECCCC
T ss_pred             ECCCC
Confidence            98873

>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}

Probab=96.64  E-value=0.0032  Score=53.47  Aligned_cols=103  Identities=22%  Similarity=0.262  Sum_probs=68.4

Q ss_pred             cCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHc----CCCe-EEecCCCcccHHHHHHHHHHHc
Q 017916          177 ANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKEL----GADN-IVKVSTNLQDIAEEVEKIQKAM  251 (364)
Q Consensus       177 ~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~l----g~~~-~~~~~~~~~~~~~~i~~~~~~~  251 (364)
                      ....++++||..|+| .|..+..+++..+...+++++.+++..+.+++.    |... +.....   +..+.+....  .
T Consensus        50 ~~~~~~~~vLdiG~G-~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~---d~~~~~~~~~--~  123 (233)
T 2gpy_A           50 LKMAAPARILEIGTA-IGYSAIRMAQALPEATIVSIERDERRYEEAHKHVKALGLESRIELLFG---DALQLGEKLE--L  123 (233)
T ss_dssp             HHHHCCSEEEEECCT-TSHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECS---CGGGSHHHHT--T
T ss_pred             HhccCCCEEEEecCC-CcHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEC---CHHHHHHhcc--c
Confidence            334578899999987 588888999988444899999999887776653    5421 211111   2221111110  1


Q ss_pred             CCCccEEEECCCC---HHHHHHHHHhcccCCEEEEEc
Q 017916          252 GTGIDVSFDCAGF---NKTMSTALSATRAGGKVCLVG  285 (364)
Q Consensus       252 ~~~~d~vid~~g~---~~~~~~~~~~l~~~G~~v~~g  285 (364)
                      ...+|+|+.....   ...+..+.+.|+++|.++...
T Consensus       124 ~~~fD~I~~~~~~~~~~~~l~~~~~~L~pgG~lv~~~  160 (233)
T 2gpy_A          124 YPLFDVLFIDAAKGQYRRFFDMYSPMVRPGGLILSDN  160 (233)
T ss_dssp             SCCEEEEEEEGGGSCHHHHHHHHGGGEEEEEEEEEET
T ss_pred             CCCccEEEECCCHHHHHHHHHHHHHHcCCCeEEEEEc
Confidence            3579999865442   467788999999999998764

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}

Probab=96.63  E-value=0.014  Score=50.53  Aligned_cols=80  Identities=16%  Similarity=0.201  Sum_probs=51.8

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhH-HHHHHHcCCCeEEecCC-CcccHHHHHHHHHHHcCCCccE
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYR-LSVAKELGADNIVKVST-NLQDIAEEVEKIQKAMGTGIDV  257 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~-~~~~~~lg~~~~~~~~~-~~~~~~~~i~~~~~~~~~~~d~  257 (364)
                      .+.++||+|+ +++|.+.++.+...|++ |+.++++.++ .+.+++.++.. +..|- ..+++.+.++.+.+. -+++|+
T Consensus        26 ~~k~vlVTGas~gIG~aia~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~-~~~Dv~~~~~v~~~~~~~~~~-~g~iD~  102 (260)
T 3gem_A           26 SSAPILITGASQRVGLHCALRLLEHGHR-VIISYRTEHASVTELRQAGAVA-LYGDFSCETGIMAFIDLLKTQ-TSSLRA  102 (260)
T ss_dssp             -CCCEEESSTTSHHHHHHHHHHHHTTCC-EEEEESSCCHHHHHHHHHTCEE-EECCTTSHHHHHHHHHHHHHH-CSCCSE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCE-EEEEeCChHHHHHHHHhcCCeE-EECCCCCHHHHHHHHHHHHHh-cCCCCE
Confidence            4678999998 99999999999889995 5666665544 44555666432 22222 223344444444332 357999


Q ss_pred             EEECCC
Q 017916          258 SFDCAG  263 (364)
Q Consensus       258 vid~~g  263 (364)
                      +|+++|
T Consensus       103 lv~nAg  108 (260)
T 3gem_A          103 VVHNAS  108 (260)
T ss_dssp             EEECCC
T ss_pred             EEECCC
Confidence            999988

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}

Probab=96.62  E-value=0.016  Score=49.79  Aligned_cols=82  Identities=20%  Similarity=0.327  Sum_probs=52.5

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHH-Hc-----C-C-CeEEecCC-CcccHHHHHHHHHHH
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAK-EL-----G-A-DNIVKVST-NLQDIAEEVEKIQKA  250 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~-~l-----g-~-~~~~~~~~-~~~~~~~~i~~~~~~  250 (364)
                      .+.++||+|+ +++|.+.++.+...|+ .|+.++++.++.+.+. ++     + . ...+..|- ..+++.+.++++.+.
T Consensus         6 ~~k~~lVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   84 (250)
T 3nyw_A            6 QKGLAIITGASQGIGAVIAAGLATDGY-RVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIKDIHQK   84 (250)
T ss_dssp             CCCEEEEESTTSHHHHHHHHHHHHHTC-EEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCHHHHHHHHHHHHHh
Confidence            4678999998 9999999998888899 6777778776654332 22     2 1 12222222 223344444444333


Q ss_pred             cCCCccEEEECCCC
Q 017916          251 MGTGIDVSFDCAGF  264 (364)
Q Consensus       251 ~~~~~d~vid~~g~  264 (364)
                      . +++|++|+++|.
T Consensus        85 ~-g~iD~lvnnAg~   97 (250)
T 3nyw_A           85 Y-GAVDILVNAAAM   97 (250)
T ss_dssp             H-CCEEEEEECCCC
T ss_pred             c-CCCCEEEECCCc
Confidence            2 479999999884

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*

Probab=96.60  E-value=0.021  Score=49.32  Aligned_cols=82  Identities=23%  Similarity=0.316  Sum_probs=50.5

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHH-CCCCEEEEEecChhHHHH-HHH---cCCC-eEEecCCC-cccHHHHHHHHHHHcC
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARA-FGAPRIVIVDVDDYRLSV-AKE---LGAD-NIVKVSTN-LQDIAEEVEKIQKAMG  252 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~-~g~~~vv~~~~~~~~~~~-~~~---lg~~-~~~~~~~~-~~~~~~~i~~~~~~~~  252 (364)
                      .+.+|||+|+ |.+|.+.++.+.. .|+ .|+.++++.++.+. .++   .+.. ..+..+-. .+++.+.++.+.... 
T Consensus         3 ~~k~vlITGasggIG~~~a~~L~~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-   80 (276)
T 1wma_A            3 GIHVALVTGGNKGIGLAIVRDLCRLFSG-DVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEY-   80 (276)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHHSSS-EEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHhcCC-eEEEEeCChHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHhc-
Confidence            5678999998 9999999888887 899 57777777655432 222   2322 22322222 233333444433322 


Q ss_pred             CCccEEEECCCC
Q 017916          253 TGIDVSFDCAGF  264 (364)
Q Consensus       253 ~~~d~vid~~g~  264 (364)
                      +++|++|+++|.
T Consensus        81 g~id~li~~Ag~   92 (276)
T 1wma_A           81 GGLDVLVNNAGI   92 (276)
T ss_dssp             SSEEEEEECCCC
T ss_pred             CCCCEEEECCcc
Confidence            479999999873

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}

Probab=96.60  E-value=0.018  Score=49.71  Aligned_cols=81  Identities=21%  Similarity=0.288  Sum_probs=52.2

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHH-HHcCCC-eEEecCC-CcccHHHHHHHHHHHcCCCcc
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KELGAD-NIVKVST-NLQDIAEEVEKIQKAMGTGID  256 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~-~~lg~~-~~~~~~~-~~~~~~~~i~~~~~~~~~~~d  256 (364)
                      .+.++||+|+ |.+|.+.++.+...|+ .|++++++.++.+.+ +++... ..+..+- ..+++.+.++.+.+.. +++|
T Consensus        11 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~~~-g~iD   88 (263)
T 3ak4_A           11 SGRKAIVTGGSKGIGAAIARALDKAGA-TVAIADLDVMAAQAVVAGLENGGFAVEVDVTKRASVDAAMQKAIDAL-GGFD   88 (263)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTCTTCCEEEECCTTCHHHHHHHHHHHHHHH-TCCC
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHHHHHHHc-CCCC
Confidence            4689999998 9999999999999999 577777777665543 334321 1222222 2233334444443332 4799


Q ss_pred             EEEECCC
Q 017916          257 VSFDCAG  263 (364)
Q Consensus       257 ~vid~~g  263 (364)
                      ++|+++|
T Consensus        89 ~lv~~Ag   95 (263)
T 3ak4_A           89 LLCANAG   95 (263)
T ss_dssp             EEEECCC
T ss_pred             EEEECCC
Confidence            9999987

>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*

Probab=96.60  E-value=0.0067  Score=46.85  Aligned_cols=77  Identities=13%  Similarity=0.243  Sum_probs=51.3

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcCCCccEEEE
Q 017916          181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  260 (364)
Q Consensus       181 ~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid  260 (364)
                      ++++|+|.|+|.+|...++.++..|.+ |++++.++++.+.+++.+.. .+..+.  .+ .+.+++.   .-.++|++|.
T Consensus         5 ~~~~v~I~G~G~iG~~~a~~l~~~g~~-v~~~d~~~~~~~~~~~~~~~-~~~~d~--~~-~~~l~~~---~~~~~d~vi~   76 (144)
T 2hmt_A            5 KNKQFAVIGLGRFGGSIVKELHRMGHE-VLAVDINEEKVNAYASYATH-AVIANA--TE-ENELLSL---GIRNFEYVIV   76 (144)
T ss_dssp             -CCSEEEECCSHHHHHHHHHHHHTTCC-CEEEESCHHHHHTTTTTCSE-EEECCT--TC-HHHHHTT---TGGGCSEEEE
T ss_pred             cCCcEEEECCCHHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHhCCE-EEEeCC--CC-HHHHHhc---CCCCCCEEEE
Confidence            356899999999999999999999985 67777877776665555543 222121  12 1222221   1247999999


Q ss_pred             CCCCH
Q 017916          261 CAGFN  265 (364)
Q Consensus       261 ~~g~~  265 (364)
                      +++..
T Consensus        77 ~~~~~   81 (144)
T 2hmt_A           77 AIGAN   81 (144)
T ss_dssp             CCCSC
T ss_pred             CCCCc
Confidence            99963

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}

Probab=96.60  E-value=0.017  Score=49.99  Aligned_cols=104  Identities=15%  Similarity=0.240  Sum_probs=61.0

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChh---HHH-HHHHc---CCCe-EEecCC-CcccHHHHHHHHHHH
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDY---RLS-VAKEL---GADN-IVKVST-NLQDIAEEVEKIQKA  250 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~---~~~-~~~~l---g~~~-~~~~~~-~~~~~~~~i~~~~~~  250 (364)
                      .+.++||+|+ +++|.+.++.+...|+ .|+.+.+...   +.+ +.+++   +... .+..|- ..+++.+.++.+.+.
T Consensus        10 ~~k~vlVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~   88 (262)
T 3ksu_A           10 KNKVIVIAGGIKNLGALTAKTFALESV-NLVLHYHQAKDSDTANKLKDELEDQGAKVALYQSDLSNEEEVAKLFDFAEKE   88 (262)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHTTSSC-EEEEEESCGGGHHHHHHHHHHHHTTTCEEEEEECCCCSHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEecCccCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence            4789999998 9999999999989999 4566544332   222 22222   3321 222222 223333344444332


Q ss_pred             cCCCccEEEECCCC----------HH---------------HHHHHHHhcccCCEEEEEcC
Q 017916          251 MGTGIDVSFDCAGF----------NK---------------TMSTALSATRAGGKVCLVGM  286 (364)
Q Consensus       251 ~~~~~d~vid~~g~----------~~---------------~~~~~~~~l~~~G~~v~~g~  286 (364)
                      . +++|++|+++|.          .+               ..+.++..|+++|+++.++.
T Consensus        89 ~-g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~isS  148 (262)
T 3ksu_A           89 F-GKVDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMNPNGHIITIAT  148 (262)
T ss_dssp             H-CSEEEEEECCCCCCSSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEECC
T ss_pred             c-CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCEEEEEec
Confidence            2 479999999883          22               22334445566789988763

>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}

Probab=96.59  E-value=0.0077  Score=51.09  Aligned_cols=105  Identities=14%  Similarity=0.129  Sum_probs=69.3

Q ss_pred             HHHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCC-EEEEEecChhHHHHHHHcCC--CeEEecCCCcccHHHHHHHHHHH
Q 017916          174 CRRANIGPETNVLIMGAGPIGLVTMLGARAFGAP-RIVIVDVDDYRLSVAKELGA--DNIVKVSTNLQDIAEEVEKIQKA  250 (364)
Q Consensus       174 l~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~-~vv~~~~~~~~~~~~~~lg~--~~~~~~~~~~~~~~~~i~~~~~~  250 (364)
                      ++...++||++||=.|+|. |..+..+|+..|.+ .|++++.+++..+.+++.-.  ..+........+...    . ..
T Consensus        70 l~~l~ikpG~~VldlG~G~-G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~~~ni~~V~~d~~~p~~----~-~~  143 (233)
T 4df3_A           70 LIELPVKEGDRILYLGIAS-GTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRDRRNIFPILGDARFPEK----Y-RH  143 (233)
T ss_dssp             CSCCCCCTTCEEEEETCTT-SHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTTCTTEEEEESCTTCGGG----G-TT
T ss_pred             hhhcCCCCCCEEEEecCcC-CHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHhhcCeeEEEEeccCccc----c-cc
Confidence            4567899999999999866 78999999988754 79999999988877665321  122211111111100    0 01


Q ss_pred             cCCCccEEEECCCCH----HHHHHHHHhcccCCEEEEE
Q 017916          251 MGTGIDVSFDCAGFN----KTMSTALSATRAGGKVCLV  284 (364)
Q Consensus       251 ~~~~~d~vid~~g~~----~~~~~~~~~l~~~G~~v~~  284 (364)
                      ....+|+||....-+    ..+.++.+.|+|+|+++..
T Consensus       144 ~~~~vDvVf~d~~~~~~~~~~l~~~~r~LKpGG~lvI~  181 (233)
T 4df3_A          144 LVEGVDGLYADVAQPEQAAIVVRNARFFLRDGGYMLMA  181 (233)
T ss_dssp             TCCCEEEEEECCCCTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             ccceEEEEEEeccCChhHHHHHHHHHHhccCCCEEEEE
Confidence            135689888644432    3567788899999999875

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=96.59  E-value=0.022  Score=48.70  Aligned_cols=80  Identities=26%  Similarity=0.315  Sum_probs=52.8

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHH-HHcCCCeEEecCCC-cccHHHHHHHHHHHcCCCccE
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KELGADNIVKVSTN-LQDIAEEVEKIQKAMGTGIDV  257 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~-~~lg~~~~~~~~~~-~~~~~~~i~~~~~~~~~~~d~  257 (364)
                      .+.++||+|+ |.+|.+.++.+...|+ .|+.++++.++.+.+ +++++ ..+..|-. .+++.+.++...+.. +++|+
T Consensus         4 ~~k~vlVTGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~-~~~~~D~~~~~~~~~~~~~~~~~~-g~id~   80 (245)
T 1uls_A            4 KDKAVLITGAAHGIGRATLELFAKEGA-RLVACDIEEGPLREAAEAVGA-HPVVMDVADPASVERGFAEALAHL-GRLDG   80 (245)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTTTC-EEEECCTTCHHHHHHHHHHHHHHH-SSCCE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHcCC-EEEEecCCCHHHHHHHHHHHHHHc-CCCCE
Confidence            4678999998 9999999999999999 577777777665543 44553 22322222 233334444443322 47999


Q ss_pred             EEECCC
Q 017916          258 SFDCAG  263 (364)
Q Consensus       258 vid~~g  263 (364)
                      +|+++|
T Consensus        81 lvn~Ag   86 (245)
T 1uls_A           81 VVHYAG   86 (245)
T ss_dssp             EEECCC
T ss_pred             EEECCC
Confidence            999988

>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*

Probab=96.59  E-value=0.022  Score=50.25  Aligned_cols=100  Identities=12%  Similarity=0.168  Sum_probs=70.9

Q ss_pred             HHHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHH----cCCC-eEEecCCCcccHHHHHHHHH
Q 017916          174 CRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKE----LGAD-NIVKVSTNLQDIAEEVEKIQ  248 (364)
Q Consensus       174 l~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~----lg~~-~~~~~~~~~~~~~~~i~~~~  248 (364)
                      ++...++++++||-.|+|. |..+..+++..|. .|++++.+++..+.+++    .|.. .+....   .++.    .+ 
T Consensus        65 ~~~~~~~~~~~vLDiGcG~-G~~~~~la~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~---~d~~----~~-  134 (302)
T 3hem_A           65 LDKLNLEPGMTLLDIGCGW-GSTMRHAVAEYDV-NVIGLTLSENQYAHDKAMFDEVDSPRRKEVRI---QGWE----EF-  134 (302)
T ss_dssp             HHTTCCCTTCEEEEETCTT-SHHHHHHHHHHCC-EEEEEECCHHHHHHHHHHHHHSCCSSCEEEEE---CCGG----GC-
T ss_pred             HHHcCCCCcCEEEEeeccC-cHHHHHHHHhCCC-EEEEEECCHHHHHHHHHHHHhcCCCCceEEEE---CCHH----Hc-
Confidence            3567789999999999875 8888899998886 79999999988777664    3433 111111   1211    11 


Q ss_pred             HHcCCCccEEEECCC-----C----------HHHHHHHHHhcccCCEEEEEcC
Q 017916          249 KAMGTGIDVSFDCAG-----F----------NKTMSTALSATRAGGKVCLVGM  286 (364)
Q Consensus       249 ~~~~~~~d~vid~~g-----~----------~~~~~~~~~~l~~~G~~v~~g~  286 (364)
                         .+.+|+|+....     .          ...+..+.++|+|+|+++....
T Consensus       135 ---~~~fD~v~~~~~~~~~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~  184 (302)
T 3hem_A          135 ---DEPVDRIVSLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLHTI  184 (302)
T ss_dssp             ---CCCCSEEEEESCGGGTTCCSSCCCTTHHHHHHHHHHHSSCTTCEEEEEEE
T ss_pred             ---CCCccEEEEcchHHhcCccccccchhHHHHHHHHHHHhcCCCcEEEEEEE
Confidence               467999986422     1          3677889999999999998754

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*

Probab=96.59  E-value=0.013  Score=50.46  Aligned_cols=82  Identities=13%  Similarity=0.179  Sum_probs=52.2

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHH-HHH---cCCCe-EEecCC-CcccHHHHHHHHHHHcCC
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSV-AKE---LGADN-IVKVST-NLQDIAEEVEKIQKAMGT  253 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~-~~~---lg~~~-~~~~~~-~~~~~~~~i~~~~~~~~~  253 (364)
                      .+.++||+|+ |.+|.+.++.+...|+ .|+.+++++++.+. .++   .+... .+..|- ..+++.+.++.+.+..++
T Consensus         8 ~~k~vlVTGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g   86 (260)
T 2ae2_A            8 EGCTALVTGGSRGIGYGIVEELASLGA-SVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHFHG   86 (260)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHTTT
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            4689999998 9999999999988999 57777777765443 222   24321 222222 223344444444333325


Q ss_pred             CccEEEECCC
Q 017916          254 GIDVSFDCAG  263 (364)
Q Consensus       254 ~~d~vid~~g  263 (364)
                      ++|++|+++|
T Consensus        87 ~id~lv~~Ag   96 (260)
T 2ae2_A           87 KLNILVNNAG   96 (260)
T ss_dssp             CCCEEEECCC
T ss_pred             CCCEEEECCC
Confidence            7999999987

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=96.58  E-value=0.023  Score=49.08  Aligned_cols=81  Identities=19%  Similarity=0.227  Sum_probs=51.9

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHH-HH---cCCC--eEEecCC-CcccHHHHHHHHHHHcC
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KE---LGAD--NIVKVST-NLQDIAEEVEKIQKAMG  252 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~-~~---lg~~--~~~~~~~-~~~~~~~~i~~~~~~~~  252 (364)
                      .|.++||+|+ +.+|.+.++.+...|+ .|+.++++.++.+.+ ++   .+..  ..+..|- ..+++.+.++...+.. 
T Consensus         9 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-   86 (262)
T 3pk0_A            9 QGRSVVVTGGTKGIGRGIATVFARAGA-NVAVAGRSTADIDACVADLDQLGSGKVIGVQTDVSDRAQCDALAGRAVEEF-   86 (262)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTSSSCEEEEECCTTSHHHHHHHHHHHHHHH-
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhCCCcEEEEEcCCCCHHHHHHHHHHHHHHh-
Confidence            4789999998 9999999999999999 677777877665432 22   2311  2222222 2233333444443332 


Q ss_pred             CCccEEEECCC
Q 017916          253 TGIDVSFDCAG  263 (364)
Q Consensus       253 ~~~d~vid~~g  263 (364)
                      +++|++|+++|
T Consensus        87 g~id~lvnnAg   97 (262)
T 3pk0_A           87 GGIDVVCANAG   97 (262)
T ss_dssp             SCCSEEEECCC
T ss_pred             CCCCEEEECCC
Confidence            47999999987

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}

Probab=96.58  E-value=0.015  Score=50.00  Aligned_cols=81  Identities=16%  Similarity=0.165  Sum_probs=52.7

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHH-HH---cCCC-eEEecCC-CcccHHHHHHHHHHHcCC
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KE---LGAD-NIVKVST-NLQDIAEEVEKIQKAMGT  253 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~-~~---lg~~-~~~~~~~-~~~~~~~~i~~~~~~~~~  253 (364)
                      .+.++||+|+ +++|.+.++.+...|+ .|+.++++.++.+.+ ++   .+.. ..+..|- ..+++.+.++.+.+.  +
T Consensus         6 ~~k~vlVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~--g   82 (252)
T 3h7a_A            6 RNATVAVIGAGDYIGAEIAKKFAAEGF-TVFAGRRNGEKLAPLVAEIEAAGGRIVARSLDARNEDEVTAFLNAADAH--A   82 (252)
T ss_dssp             CSCEEEEECCSSHHHHHHHHHHHHTTC-EEEEEESSGGGGHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHH--S
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECcCCCHHHHHHHHHHHHhh--C
Confidence            4678999998 9999999999999999 577777777654432 22   2432 1222222 223344444444333  6


Q ss_pred             CccEEEECCCC
Q 017916          254 GIDVSFDCAGF  264 (364)
Q Consensus       254 ~~d~vid~~g~  264 (364)
                      ++|++|+++|.
T Consensus        83 ~id~lv~nAg~   93 (252)
T 3h7a_A           83 PLEVTIFNVGA   93 (252)
T ss_dssp             CEEEEEECCCC
T ss_pred             CceEEEECCCc
Confidence            89999999883

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}

Probab=96.57  E-value=0.021  Score=51.03  Aligned_cols=81  Identities=12%  Similarity=0.235  Sum_probs=52.4

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHH-HH---cCC--C-eEEecCC-CcccHHHHHHHHHHHc
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KE---LGA--D-NIVKVST-NLQDIAEEVEKIQKAM  251 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~-~~---lg~--~-~~~~~~~-~~~~~~~~i~~~~~~~  251 (364)
                      .+.+|||+|+ |++|.+.++.+...|+ .|++++++.++.+.+ +.   .+.  . ..+..|- ..+++.+.++.+... 
T Consensus         7 ~~k~vlVTGas~gIG~~la~~l~~~G~-~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~-   84 (319)
T 3ioy_A            7 AGRTAFVTGGANGVGIGLVRQLLNQGC-KVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEVEAR-   84 (319)
T ss_dssp             TTCEEEEETTTSTHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHHHHH-
T ss_pred             CCCEEEEcCCchHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHHHHHh-
Confidence            4679999998 9999999999989999 577777877665433 22   232  1 2222222 223344444444332 


Q ss_pred             CCCccEEEECCC
Q 017916          252 GTGIDVSFDCAG  263 (364)
Q Consensus       252 ~~~~d~vid~~g  263 (364)
                      .+++|++|+++|
T Consensus        85 ~g~id~lv~nAg   96 (319)
T 3ioy_A           85 FGPVSILCNNAG   96 (319)
T ss_dssp             TCCEEEEEECCC
T ss_pred             CCCCCEEEECCC
Confidence            357999999988

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A

Probab=96.55  E-value=0.024  Score=48.78  Aligned_cols=82  Identities=23%  Similarity=0.313  Sum_probs=54.1

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHH-HHHcCCCe-EEecCCC-cccHHHHHHHHHHHcCCCcc
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSV-AKELGADN-IVKVSTN-LQDIAEEVEKIQKAMGTGID  256 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~-~~~lg~~~-~~~~~~~-~~~~~~~i~~~~~~~~~~~d  256 (364)
                      .+.++||+|+ +.+|.+.++.+...|+ .|+.++++.++.+. .++++... .+..+-. .+++.+.+++..+. -+++|
T Consensus         7 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~-~g~id   84 (259)
T 4e6p_A            7 EGKSALITGSARGIGRAFAEAYVREGA-TVAIADIDIERARQAAAEIGPAAYAVQMDVTRQDSIDAAIAATVEH-AGGLD   84 (259)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHH-SSSCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCCceEEEeeCCCHHHHHHHHHHHHHH-cCCCC
Confidence            4689999998 9999999999989999 57777777766543 44555432 2222222 23334444444333 34799


Q ss_pred             EEEECCCC
Q 017916          257 VSFDCAGF  264 (364)
Q Consensus       257 ~vid~~g~  264 (364)
                      ++|+++|.
T Consensus        85 ~lv~~Ag~   92 (259)
T 4e6p_A           85 ILVNNAAL   92 (259)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCc
Confidence            99999884

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}

Probab=96.54  E-value=0.0063  Score=52.88  Aligned_cols=81  Identities=19%  Similarity=0.199  Sum_probs=50.4

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCC-CcccHHHHHHHHHHHcCCCccEE
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVST-NLQDIAEEVEKIQKAMGTGIDVS  258 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~-~~~~~~~~i~~~~~~~~~~~d~v  258 (364)
                      .+.++||+|+ |++|.+.++.+...|++ |+.++++.++.+.+..-.. ..+..+- ..+++.+.++...+.. +++|++
T Consensus        15 ~~k~vlVTGas~gIG~aia~~l~~~G~~-V~~~~r~~~~~~~~~~~~~-~~~~~Dv~d~~~v~~~~~~~~~~~-g~iD~l   91 (266)
T 3p19_A           15 MKKLVVITGASSGIGEAIARRFSEEGHP-LLLLARRVERLKALNLPNT-LCAQVDVTDKYTFDTAITRAEKIY-GPADAI   91 (266)
T ss_dssp             CCCEEEEESTTSHHHHHHHHHHHHTTCC-EEEEESCHHHHHTTCCTTE-EEEECCTTCHHHHHHHHHHHHHHH-CSEEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCE-EEEEECCHHHHHHhhcCCc-eEEEecCCCHHHHHHHHHHHHHHC-CCCCEE
Confidence            4678999998 99999999999999995 6667677665433211111 1222222 2233444444443332 479999


Q ss_pred             EECCCC
Q 017916          259 FDCAGF  264 (364)
Q Consensus       259 id~~g~  264 (364)
                      |+++|.
T Consensus        92 vnnAg~   97 (266)
T 3p19_A           92 VNNAGM   97 (266)
T ss_dssp             EECCCC
T ss_pred             EECCCc
Confidence            999883

>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}

Probab=96.54  E-value=0.019  Score=48.26  Aligned_cols=102  Identities=16%  Similarity=0.099  Sum_probs=68.1

Q ss_pred             CCCCCCEEEEEcCCHHHHHHHHHHHHCC-----CCEEEEEecChhHHHHHHHc----C-----CCeEEecC-CCcccHHH
Q 017916          178 NIGPETNVLIMGAGPIGLVTMLGARAFG-----APRIVIVDVDDYRLSVAKEL----G-----ADNIVKVS-TNLQDIAE  242 (364)
Q Consensus       178 ~~~~g~~VLI~Gag~~G~~ai~la~~~g-----~~~vv~~~~~~~~~~~~~~l----g-----~~~~~~~~-~~~~~~~~  242 (364)
                      .++++++||-.|+|. |..+..+++..+     ...+++++.+++..+.+++.    +     ...+.... +....+.+
T Consensus        77 ~~~~~~~VLdiG~G~-G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~  155 (227)
T 2pbf_A           77 VLKPGSRAIDVGSGS-GYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIHKNIYQVNEE  155 (227)
T ss_dssp             TSCTTCEEEEESCTT-SHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEECCGGGCCHH
T ss_pred             hCCCCCEEEEECCCC-CHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEECChHhcccc
Confidence            678999999999866 888889998876     23799999999887776542    3     22221111 11111110


Q ss_pred             HHHHHHHHcCCCccEEEECCCCHHHHHHHHHhcccCCEEEEEc
Q 017916          243 EVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVG  285 (364)
Q Consensus       243 ~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g  285 (364)
                      ..   .  ....+|+|+...........+.+.|+++|+++..-
T Consensus       156 ~~---~--~~~~fD~I~~~~~~~~~~~~~~~~LkpgG~lv~~~  193 (227)
T 2pbf_A          156 EK---K--ELGLFDAIHVGASASELPEILVDLLAENGKLIIPI  193 (227)
T ss_dssp             HH---H--HHCCEEEEEECSBBSSCCHHHHHHEEEEEEEEEEE
T ss_pred             cC---c--cCCCcCEEEECCchHHHHHHHHHhcCCCcEEEEEE
Confidence            00   1  12579999987665566788899999999988763

>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*

Probab=96.53  E-value=0.006  Score=49.57  Aligned_cols=102  Identities=17%  Similarity=0.236  Sum_probs=66.0

Q ss_pred             HHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHH----cCCCeEEecCCCcccHHHHHHHHHHH
Q 017916          175 RRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKE----LGADNIVKVSTNLQDIAEEVEKIQKA  250 (364)
Q Consensus       175 ~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~i~~~~~~  250 (364)
                      -...++++++||-.|+|. |..+..+++. +. .|++++.+++..+.+++    .+...+........++.       ..
T Consensus        16 l~~~~~~~~~vLDiGcG~-G~~~~~la~~-~~-~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~~~~~l~-------~~   85 (185)
T 3mti_A           16 LAEVLDDESIVVDATMGN-GNDTAFLAGL-SK-KVYAFDVQEQALGKTSQRLSDLGIENTELILDGHENLD-------HY   85 (185)
T ss_dssp             HHTTCCTTCEEEESCCTT-SHHHHHHHTT-SS-EEEEEESCHHHHHHHHHHHHHHTCCCEEEEESCGGGGG-------GT
T ss_pred             HHHhCCCCCEEEEEcCCC-CHHHHHHHHh-CC-EEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCcHHHHH-------hh
Confidence            345678999999988765 7778888877 65 79999999988776654    34432221111111111       11


Q ss_pred             cCCCccEEEECCCC-----------H----HHHHHHHHhcccCCEEEEEcC
Q 017916          251 MGTGIDVSFDCAGF-----------N----KTMSTALSATRAGGKVCLVGM  286 (364)
Q Consensus       251 ~~~~~d~vid~~g~-----------~----~~~~~~~~~l~~~G~~v~~g~  286 (364)
                      ....+|+|+...+.           .    ..+..+.+.|+|+|+++....
T Consensus        86 ~~~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~  136 (185)
T 3mti_A           86 VREPIRAAIFNLGYLPSADKSVITKPHTTLEAIEKILDRLEVGGRLAIMIY  136 (185)
T ss_dssp             CCSCEEEEEEEEC-----------CHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred             ccCCcCEEEEeCCCCCCcchhcccChhhHHHHHHHHHHhcCCCcEEEEEEe
Confidence            14579998755321           1    345778899999999987643

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}

Probab=96.53  E-value=0.03  Score=49.27  Aligned_cols=104  Identities=17%  Similarity=0.214  Sum_probs=62.4

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecCh--hHHH----HHHHcCCCeE-EecCC-CcccHHHHHHHHHHHc
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDD--YRLS----VAKELGADNI-VKVST-NLQDIAEEVEKIQKAM  251 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~--~~~~----~~~~lg~~~~-~~~~~-~~~~~~~~i~~~~~~~  251 (364)
                      .|.++||+|+ +++|.+.++.+...|+ .|+.++.+.  ++.+    .+++.+.... +..|- ..+++.+.++.+.+..
T Consensus        48 ~~k~vlVTGas~GIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  126 (294)
T 3r3s_A           48 KDRKALVTGGDSGIGRAAAIAYAREGA-DVAINYLPAEEEDAQQVKALIEECGRKAVLLPGDLSDESFARSLVHKAREAL  126 (294)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEECCGGGHHHHHHHHHHHHHTTCCEEECCCCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCcchhHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHc
Confidence            5789999998 9999999999999999 466665542  2222    2334454322 11121 1223333333333322


Q ss_pred             CCCccEEEECCCCH-----------H---------------HHHHHHHhcccCCEEEEEcC
Q 017916          252 GTGIDVSFDCAGFN-----------K---------------TMSTALSATRAGGKVCLVGM  286 (364)
Q Consensus       252 ~~~~d~vid~~g~~-----------~---------------~~~~~~~~l~~~G~~v~~g~  286 (364)
                       +++|++|+++|..           +               ..+.++..+.++|+++.++.
T Consensus       127 -g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~Iv~isS  186 (294)
T 3r3s_A          127 -GGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKGASIITTSS  186 (294)
T ss_dssp             -TCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECC
T ss_pred             -CCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECC
Confidence             4799999988731           1               23344556667899998863

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*

Probab=96.51  E-value=0.026  Score=48.40  Aligned_cols=77  Identities=17%  Similarity=0.101  Sum_probs=50.7

Q ss_pred             CEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHH---HcCCCeEEecCCCcccHHHHHHHHHHHcCCCccEE
Q 017916          183 TNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAK---ELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVS  258 (364)
Q Consensus       183 ~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~---~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~v  258 (364)
                      .++||+|+ |.+|.+.++.+...|+ .|+.++++.++.+.+.   ..+..... +  ..+++.+.++.+.+.. +++|++
T Consensus         2 k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~l~~~~~~~~~-~--d~~~v~~~~~~~~~~~-g~iD~l   76 (254)
T 1zmt_A            2 STAIVTNVKHFGGMGSALRLSEAGH-TVACHDESFKQKDELEAFAETYPQLKP-M--SEQEPAELIEAVTSAY-GQVDVL   76 (254)
T ss_dssp             CEEEESSTTSTTHHHHHHHHHHTTC-EEEECCGGGGSHHHHHHHHHHCTTSEE-C--CCCSHHHHHHHHHHHH-SCCCEE
T ss_pred             eEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhcCCcEEE-E--CHHHHHHHHHHHHHHh-CCCCEE
Confidence            36899998 9999999999999999 5777777665544332   33433221 2  2345555555544333 479999


Q ss_pred             EECCCC
Q 017916          259 FDCAGF  264 (364)
Q Consensus       259 id~~g~  264 (364)
                      |+++|.
T Consensus        77 v~nAg~   82 (254)
T 1zmt_A           77 VSNDIF   82 (254)
T ss_dssp             EEECCC
T ss_pred             EECCCc
Confidence            998873

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2

Probab=96.51  E-value=0.019  Score=49.95  Aligned_cols=83  Identities=14%  Similarity=0.220  Sum_probs=52.7

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHH-HH---cCCCe-EEecCC-CcccHHHHHHHHHHHcCC
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KE---LGADN-IVKVST-NLQDIAEEVEKIQKAMGT  253 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~-~~---lg~~~-~~~~~~-~~~~~~~~i~~~~~~~~~  253 (364)
                      .+.++||+|+ |.+|.+.++.+...|+ .|+.++++.++.+.+ ++   .+... .+..|- ..+++.+.++.+....++
T Consensus        20 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g   98 (273)
T 1ae1_A           20 KGTTALVTGGSKGIGYAIVEELAGLGA-RVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVFDG   98 (273)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTTS
T ss_pred             CCCEEEEECCcchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            4689999998 9999999999999999 577777777654432 22   24322 222222 223333344444333325


Q ss_pred             CccEEEECCCC
Q 017916          254 GIDVSFDCAGF  264 (364)
Q Consensus       254 ~~d~vid~~g~  264 (364)
                      ++|++|+++|.
T Consensus        99 ~id~lv~nAg~  109 (273)
T 1ae1_A           99 KLNILVNNAGV  109 (273)
T ss_dssp             CCCEEEECCCC
T ss_pred             CCcEEEECCCC
Confidence            79999999873

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0

Probab=96.51  E-value=0.053  Score=47.26  Aligned_cols=104  Identities=20%  Similarity=0.299  Sum_probs=63.1

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecC------------hhHHHH----HHHcCCCe-EEecCC-CcccHH
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVD------------DYRLSV----AKELGADN-IVKVST-NLQDIA  241 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~------------~~~~~~----~~~lg~~~-~~~~~~-~~~~~~  241 (364)
                      .|.++||+|+ +++|.+.++.+...|+ .|+.++++            .++.+.    ++..+... .+..|- ..+++.
T Consensus         9 ~gk~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~   87 (287)
T 3pxx_A            9 QDKVVLVTGGARGQGRSHAVKLAEEGA-DIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDVRDRAAVS   87 (287)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHH
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-eEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccCCCHHHHH
Confidence            4789999998 9999999999999999 56666654            333222    22334322 222222 223333


Q ss_pred             HHHHHHHHHcCCCccEEEECCCCH--------H---------------HHHHHHHhcccCCEEEEEcC
Q 017916          242 EEVEKIQKAMGTGIDVSFDCAGFN--------K---------------TMSTALSATRAGGKVCLVGM  286 (364)
Q Consensus       242 ~~i~~~~~~~~~~~d~vid~~g~~--------~---------------~~~~~~~~l~~~G~~v~~g~  286 (364)
                      +.++++.+.. +++|++|+++|..        +               ..+.++..+..+|+++.++.
T Consensus        88 ~~~~~~~~~~-g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS  154 (287)
T 3pxx_A           88 RELANAVAEF-GKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLTSGASIITTGS  154 (287)
T ss_dssp             HHHHHHHHHH-SCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECC
T ss_pred             HHHHHHHHHc-CCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcEEEEecc
Confidence            4444443332 4799999998741        1               22334455667899998863

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}

Probab=96.50  E-value=0.023  Score=48.90  Aligned_cols=81  Identities=25%  Similarity=0.336  Sum_probs=54.9

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHH----HHHcCCCeE-EecC-CCcccHHHHHHHHHHHcCC
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSV----AKELGADNI-VKVS-TNLQDIAEEVEKIQKAMGT  253 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~----~~~lg~~~~-~~~~-~~~~~~~~~i~~~~~~~~~  253 (364)
                      +|.++||+|+ +++|.+.++.+...|+ .|+.+++++++.+.    +++.|.... +..| ...++..+.+++..+.. +
T Consensus         6 ~gKvalVTGas~GIG~aiA~~la~~Ga-~Vv~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~-G   83 (254)
T 4fn4_A            6 KNKVVIVTGAGSGIGRAIAKKFALNDS-IVVAVELLEDRLNQIVQELRGMGKEVLGVKADVSKKKDVEEFVRRTFETY-S   83 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH-S
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc-C
Confidence            5789999997 9999999999999999 67778888776543    334454322 2222 22344444444444433 4


Q ss_pred             CccEEEECCC
Q 017916          254 GIDVSFDCAG  263 (364)
Q Consensus       254 ~~d~vid~~g  263 (364)
                      ++|++++++|
T Consensus        84 ~iDiLVNNAG   93 (254)
T 4fn4_A           84 RIDVLCNNAG   93 (254)
T ss_dssp             CCCEEEECCC
T ss_pred             CCCEEEECCc
Confidence            7999999887

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2

Probab=96.50  E-value=0.033  Score=48.16  Aligned_cols=82  Identities=18%  Similarity=0.216  Sum_probs=51.2

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHH-HHHcCC-----C-eEEecCC-CcccHHHHHHHHHHHc
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSV-AKELGA-----D-NIVKVST-NLQDIAEEVEKIQKAM  251 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~-~~~lg~-----~-~~~~~~~-~~~~~~~~i~~~~~~~  251 (364)
                      .+.++||+|+ |.+|.+.++.+...|+ .|++++++.++.+. .+++..     . ..+..|- ..+++.+.++...+..
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   84 (267)
T 2gdz_A            6 NGKVALVTGAAQGIGRAFAEALLLKGA-KVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHF   84 (267)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhhcCCCceEEEecCCCCHHHHHHHHHHHHHHc
Confidence            4678999998 9999999999999999 57777777665433 233321     1 1222222 2233333444333322


Q ss_pred             CCCccEEEECCCC
Q 017916          252 GTGIDVSFDCAGF  264 (364)
Q Consensus       252 ~~~~d~vid~~g~  264 (364)
                       +++|++|+++|.
T Consensus        85 -g~id~lv~~Ag~   96 (267)
T 2gdz_A           85 -GRLDILVNNAGV   96 (267)
T ss_dssp             -SCCCEEEECCCC
T ss_pred             -CCCCEEEECCCC
Confidence             479999999884

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}

Probab=96.50  E-value=0.017  Score=49.78  Aligned_cols=80  Identities=23%  Similarity=0.338  Sum_probs=50.2

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHH-HHc-----CCC-eEEecCC-CcccHHHHHHHHHHHc
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KEL-----GAD-NIVKVST-NLQDIAEEVEKIQKAM  251 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~-~~l-----g~~-~~~~~~~-~~~~~~~~i~~~~~~~  251 (364)
                      .+.++||+|+ |.+|.+.++.+...|+ .|+.++++.++.+.+ +++     +.. ..+..+- ..+++.+.++.+.+..
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   84 (260)
T 2z1n_A            6 QGKLAVVTAGSSGLGFASALELARNGA-RLLLFSRNREKLEAAASRIASLVSGAQVDIVAGDIREPGDIDRLFEKARDLG   84 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHTT
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEEccCCCHHHHHHHHHHHHHhc
Confidence            4678999998 9999999999988999 577777777654432 332     212 2222222 2233334444443322


Q ss_pred             CCCccEEEECCC
Q 017916          252 GTGIDVSFDCAG  263 (364)
Q Consensus       252 ~~~~d~vid~~g  263 (364)
                        ++|++|+++|
T Consensus        85 --gid~lv~~Ag   94 (260)
T 2z1n_A           85 --GADILVYSTG   94 (260)
T ss_dssp             --CCSEEEECCC
T ss_pred             --CCCEEEECCC
Confidence              3999999987

>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}

Probab=96.49  E-value=0.0029  Score=54.10  Aligned_cols=101  Identities=18%  Similarity=0.286  Sum_probs=63.4

Q ss_pred             CCCCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcCCCccE
Q 017916          179 IGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDV  257 (364)
Q Consensus       179 ~~~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~  257 (364)
                      +-.|.++||+|+ +++|.+.++.+...|+ .|+.++.+.++.+....-.+ ..+..|-.+   .+.++++.+.. +++|+
T Consensus         8 lf~GK~alVTGas~GIG~aia~~la~~Ga-~Vv~~~~~~~~~~~~~~~~~-~~~~~Dv~~---~~~v~~~~~~~-g~iDi   81 (242)
T 4b79_A            8 IYAGQQVLVTGGSSGIGAAIAMQFAELGA-EVVALGLDADGVHAPRHPRI-RREELDITD---SQRLQRLFEAL-PRLDV   81 (242)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSTTSTTSCCCTTE-EEEECCTTC---HHHHHHHHHHC-SCCSE
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHhhhhcCCe-EEEEecCCC---HHHHHHHHHhc-CCCCE
Confidence            347999999997 9999999999999999 57777777665432211111 111122111   23344554443 47999


Q ss_pred             EEECCCCH--------H---------------HHHHHHHhcc-cCCEEEEEc
Q 017916          258 SFDCAGFN--------K---------------TMSTALSATR-AGGKVCLVG  285 (364)
Q Consensus       258 vid~~g~~--------~---------------~~~~~~~~l~-~~G~~v~~g  285 (364)
                      +++++|..        +               ..+.++..|+ .+|+++.++
T Consensus        82 LVNNAGi~~~~~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~~~G~IVnis  133 (242)
T 4b79_A           82 LVNNAGISRDREEYDLATFERVLRLNLSAAMLASQLARPLLAQRGGSILNIA  133 (242)
T ss_dssp             EEECCCCCCGGGGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCEEEEEEC
T ss_pred             EEECCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEe
Confidence            99998842        1               2233444553 479999886

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A

Probab=96.48  E-value=0.034  Score=47.63  Aligned_cols=82  Identities=16%  Similarity=0.292  Sum_probs=52.1

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHH-HHc----C-CCeEEecCC--C-cccHHHHHHHHHHH
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KEL----G-ADNIVKVST--N-LQDIAEEVEKIQKA  250 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~-~~l----g-~~~~~~~~~--~-~~~~~~~i~~~~~~  250 (364)
                      .+.++||+|+ +++|.+.++.+...|+ .|+.++++.++.+.+ +++    + -...+..+-  . .++..+.++.+.+.
T Consensus        11 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (252)
T 3f1l_A           11 NDRIILVTGASDGIGREAAMTYARYGA-TVILLGRNEEKLRQVASHINEETGRQPQWFILDLLTCTSENCQQLAQRIAVN   89 (252)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHSCCCEEEECCTTTCCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhcCCCceEEEEecccCCHHHHHHHHHHHHHh
Confidence            5789999998 9999999999989999 577777877665433 222    2 112222222  2 23333334433332


Q ss_pred             cCCCccEEEECCCC
Q 017916          251 MGTGIDVSFDCAGF  264 (364)
Q Consensus       251 ~~~~~d~vid~~g~  264 (364)
                       .+++|++|+++|.
T Consensus        90 -~g~id~lv~nAg~  102 (252)
T 3f1l_A           90 -YPRLDGVLHNAGL  102 (252)
T ss_dssp             -CSCCSEEEECCCC
T ss_pred             -CCCCCEEEECCcc
Confidence             3579999999874

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0

Probab=96.48  E-value=0.016  Score=51.16  Aligned_cols=83  Identities=13%  Similarity=0.139  Sum_probs=50.8

Q ss_pred             CCCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHH-HHHc---CCC--eEEecCCCc--ccHHHHHHHHHHH
Q 017916          180 GPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSV-AKEL---GAD--NIVKVSTNL--QDIAEEVEKIQKA  250 (364)
Q Consensus       180 ~~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~-~~~l---g~~--~~~~~~~~~--~~~~~~i~~~~~~  250 (364)
                      ..+.+|||+|+ +++|.+.++.+...|+ .|+.++++.++.+. ++++   +..  ..+..+-.+  +......+.+...
T Consensus        10 ~~~k~vlITGas~GIG~~~a~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~v~~~~~~~~~~   88 (311)
T 3o26_A           10 TKRRCAVVTGGNKGIGFEICKQLSSNGI-MVVLTCRDVTKGHEAVEKLKNSNHENVVFHQLDVTDPIATMSSLADFIKTH   88 (311)
T ss_dssp             --CCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTTCCSEEEEECCTTSCHHHHHHHHHHHHHH
T ss_pred             CCCcEEEEecCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCCceEEEEccCCCcHHHHHHHHHHHHHh
Confidence            35789999998 9999999999988999 67777777766432 3333   221  122222222  2223333333222


Q ss_pred             cCCCccEEEECCCC
Q 017916          251 MGTGIDVSFDCAGF  264 (364)
Q Consensus       251 ~~~~~d~vid~~g~  264 (364)
                       .+++|++|+++|.
T Consensus        89 -~g~iD~lv~nAg~  101 (311)
T 3o26_A           89 -FGKLDILVNNAGV  101 (311)
T ss_dssp             -HSSCCEEEECCCC
T ss_pred             -CCCCCEEEECCcc
Confidence             2479999999984

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0

Probab=96.48  E-value=0.022  Score=49.53  Aligned_cols=82  Identities=24%  Similarity=0.249  Sum_probs=49.7

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHc---CCC-eEEecCCCcccHHHHHHHHHHHcCCCc
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKEL---GAD-NIVKVSTNLQDIAEEVEKIQKAMGTGI  255 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~l---g~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~  255 (364)
                      .|.++||+|+ +++|.+.++.+...|+ .|+.+++++...+..+++   +.. ..+..+-.+.+-.+.+.+.... .+++
T Consensus        30 ~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~-~g~i  107 (273)
T 3uf0_A           30 AGRTAVVTGAGSGIGRAIAHGYARAGA-HVLAWGRTDGVKEVADEIADGGGSAEAVVADLADLEGAANVAEELAA-TRRV  107 (273)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSTHHHHHHHHHHTTTCEEEEEECCTTCHHHHHHHHHHHHH-HSCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEcCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHh-cCCC
Confidence            5789999998 9999999999999999 566666655444444443   322 1222222222222222222222 2579


Q ss_pred             cEEEECCCC
Q 017916          256 DVSFDCAGF  264 (364)
Q Consensus       256 d~vid~~g~  264 (364)
                      |++|+++|.
T Consensus       108 D~lv~nAg~  116 (273)
T 3uf0_A          108 DVLVNNAGI  116 (273)
T ss_dssp             CEEEECCCC
T ss_pred             cEEEECCCC
Confidence            999999873

>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*

Probab=96.47  E-value=0.032  Score=50.60  Aligned_cols=105  Identities=16%  Similarity=0.138  Sum_probs=69.7

Q ss_pred             HHHHHHHcC-CCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecC----hhH---------HHHHHHcCCCeEEecCC
Q 017916          170 GLHACRRAN-IGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVD----DYR---------LSVAKELGADNIVKVST  235 (364)
Q Consensus       170 a~~~l~~~~-~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~----~~~---------~~~~~~lg~~~~~~~~~  235 (364)
                      -+.+++..+ --++.+|+|.|+|..|..+++++..+|++.|+.++++    .+|         .+++++.+..      .
T Consensus       179 l~~A~~i~g~~l~~~kVVv~GAGaAG~~iAkll~~~G~~~I~v~Dr~Gli~~~R~~~~L~~~k~~~A~~~~~~------~  252 (388)
T 1vl6_A          179 FLNALKLTEKKIEEVKVVVNGIGAAGYNIVKFLLDLGVKNVVAVDRKGILNENDPETCLNEYHLEIARITNPE------R  252 (388)
T ss_dssp             HHHHHHHHTCCTTTCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETTEECCTTSGGGCSSHHHHHHHHTSCTT------C
T ss_pred             HHHHHHHhCCCCCCcEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCCcccCCCcccccCHHHHHHHHhhhcc------C
Confidence            334444433 2356899999999999999999999999889999887    443         4444443321      1


Q ss_pred             CcccHHHHHHHHHHHcCCCccEEEECCCCHHHHHHHHHhcccCCEEEEEcCCC
Q 017916          236 NLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGH  288 (364)
Q Consensus       236 ~~~~~~~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~  288 (364)
                      ...++.+.+        .+.|++|-+++.+-.-+++++.|+++..++.++.+.
T Consensus       253 ~~~~L~eav--------~~ADVlIG~Sap~l~t~emVk~Ma~~pIIfalSNPt  297 (388)
T 1vl6_A          253 LSGDLETAL--------EGADFFIGVSRGNILKPEWIKKMSRKPVIFALANPV  297 (388)
T ss_dssp             CCSCHHHHH--------TTCSEEEECSCSSCSCHHHHTTSCSSCEEEECCSSS
T ss_pred             chhhHHHHH--------ccCCEEEEeCCCCccCHHHHHhcCCCCEEEEcCCCC
Confidence            123444433        357999999884334456888898877665555433

>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}

Probab=96.46  E-value=0.014  Score=54.61  Aligned_cols=103  Identities=20%  Similarity=0.219  Sum_probs=67.4

Q ss_pred             HHcCCCCCCEEEEEcCCHHHHHHHHHHHHCC-CCEEEEEecChhHHHHHH----HcCCCeEEecCCCcccHHHHHHHHHH
Q 017916          175 RRANIGPETNVLIMGAGPIGLVTMLGARAFG-APRIVIVDVDDYRLSVAK----ELGADNIVKVSTNLQDIAEEVEKIQK  249 (364)
Q Consensus       175 ~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g-~~~vv~~~~~~~~~~~~~----~lg~~~~~~~~~~~~~~~~~i~~~~~  249 (364)
                      ....+++|++||=.|+|+ |..++++|..++ ...|++++.++++.+.++    .+|...+.....   |..+....   
T Consensus        99 ~~L~~~~g~~VLDlcaGp-Ggkt~~lA~~~~~~g~V~AvDis~~rl~~~~~n~~r~g~~nv~v~~~---Da~~l~~~---  171 (456)
T 3m4x_A           99 TAAAAKPGEKVLDLCAAP-GGKSTQLAAQMKGKGLLVTNEIFPKRAKILSENIERWGVSNAIVTNH---APAELVPH---  171 (456)
T ss_dssp             HHHCCCTTCEEEESSCTT-CHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHTCSSEEEECC---CHHHHHHH---
T ss_pred             HHcCCCCCCEEEEECCCc-CHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCceEEEeC---CHHHhhhh---
Confidence            335678999998887644 455667776543 347999999998877654    467765433222   22221111   


Q ss_pred             HcCCCccEEEE---CCCCH-------------------------HHHHHHHHhcccCCEEEEEc
Q 017916          250 AMGTGIDVSFD---CAGFN-------------------------KTMSTALSATRAGGKVCLVG  285 (364)
Q Consensus       250 ~~~~~~d~vid---~~g~~-------------------------~~~~~~~~~l~~~G~~v~~g  285 (364)
                       ....+|.|+-   |+|.+                         +.+..+++.|+|||+++...
T Consensus       172 -~~~~FD~Il~DaPCSg~G~~rr~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvYsT  234 (456)
T 3m4x_A          172 -FSGFFDRIVVDAPCSGEGMFRKDPNAIKEWTEESPLYCQKRQQEILSSAIKMLKNKGQLIYST  234 (456)
T ss_dssp             -HTTCEEEEEEECCCCCGGGTTTCHHHHHHCCTTHHHHHHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred             -ccccCCEEEECCCCCCccccccCHHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEE
Confidence             2467999874   55533                         45778889999999998754

>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*

Probab=96.46  E-value=0.0097  Score=51.26  Aligned_cols=101  Identities=15%  Similarity=0.179  Sum_probs=70.4

Q ss_pred             HHHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCC----eEEecCCCcccHHHHHHHHHH
Q 017916          174 CRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGAD----NIVKVSTNLQDIAEEVEKIQK  249 (364)
Q Consensus       174 l~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~----~~~~~~~~~~~~~~~i~~~~~  249 (364)
                      ++...++++.+||-.|+| .|..+..+++..+. .+++++.+++..+.+++....    .++..+....+          
T Consensus        48 ~~~~~~~~~~~vLdiG~G-~G~~~~~l~~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~----------  115 (266)
T 3ujc_A           48 LSDIELNENSKVLDIGSG-LGGGCMYINEKYGA-HTHGIDICSNIVNMANERVSGNNKIIFEANDILTKE----------  115 (266)
T ss_dssp             TTTCCCCTTCEEEEETCT-TSHHHHHHHHHHCC-EEEEEESCHHHHHHHHHTCCSCTTEEEEECCTTTCC----------
T ss_pred             HHhcCCCCCCEEEEECCC-CCHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhhcCCCeEEEECccccCC----------
Confidence            355678899999999987 47888888887777 799999999999988875432    11211111100          


Q ss_pred             HcCCCccEEEECCC--------CHHHHHHHHHhcccCCEEEEEcC
Q 017916          250 AMGTGIDVSFDCAG--------FNKTMSTALSATRAGGKVCLVGM  286 (364)
Q Consensus       250 ~~~~~~d~vid~~g--------~~~~~~~~~~~l~~~G~~v~~g~  286 (364)
                      ...+.+|+|+....        -...+..+.+.|+|+|+++....
T Consensus       116 ~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~  160 (266)
T 3ujc_A          116 FPENNFDLIYSRDAILALSLENKNKLFQKCYKWLKPTGTLLITDY  160 (266)
T ss_dssp             CCTTCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             CCCCcEEEEeHHHHHHhcChHHHHHHHHHHHHHcCCCCEEEEEEe
Confidence            01357999987532        12456788999999999998753

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2

Probab=96.46  E-value=0.0093  Score=51.59  Aligned_cols=83  Identities=18%  Similarity=0.301  Sum_probs=52.2

Q ss_pred             CCCCEEEEEcC-CHHHHHHHHHHHHCC---CCEEEEEecChhHHHHHHHc---CCC-eEEecC-CCcccHHHHHHHHHHH
Q 017916          180 GPETNVLIMGA-GPIGLVTMLGARAFG---APRIVIVDVDDYRLSVAKEL---GAD-NIVKVS-TNLQDIAEEVEKIQKA  250 (364)
Q Consensus       180 ~~g~~VLI~Ga-g~~G~~ai~la~~~g---~~~vv~~~~~~~~~~~~~~l---g~~-~~~~~~-~~~~~~~~~i~~~~~~  250 (364)
                      ..+.+|||+|+ |.+|.+.++.+...|   + .|+.++++.++.+.++++   +.. ..+..+ ...+++.+.+..+...
T Consensus        19 ~~~k~vlITGasggIG~~la~~L~~~G~~~~-~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   97 (267)
T 1sny_A           19 SHMNSILITGCNRGLGLGLVKALLNLPQPPQ-HLFTTCRNREQAKELEDLAKNHSNIHILEIDLRNFDAYDKLVADIEGV   97 (267)
T ss_dssp             -CCSEEEESCCSSHHHHHHHHHHHTSSSCCS-EEEEEESCTTSCHHHHHHHHHCTTEEEEECCTTCGGGHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHHhcCCCCc-EEEEEecChhhhHHHHHhhccCCceEEEEecCCChHHHHHHHHHHHHh
Confidence            35678999998 999999999998889   6 677777766543333332   322 222222 2234455555544433


Q ss_pred             cCC-CccEEEECCC
Q 017916          251 MGT-GIDVSFDCAG  263 (364)
Q Consensus       251 ~~~-~~d~vid~~g  263 (364)
                      .+. ++|++|+++|
T Consensus        98 ~g~~~id~li~~Ag  111 (267)
T 1sny_A           98 TKDQGLNVLFNNAG  111 (267)
T ss_dssp             HGGGCCSEEEECCC
T ss_pred             cCCCCccEEEECCC
Confidence            332 6999999987

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0

Probab=96.44  E-value=0.022  Score=48.61  Aligned_cols=82  Identities=21%  Similarity=0.285  Sum_probs=52.2

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHH----HHcCC--CeEEecCC--C-cccHHHHHHHHHHH
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA----KELGA--DNIVKVST--N-LQDIAEEVEKIQKA  250 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~----~~lg~--~~~~~~~~--~-~~~~~~~i~~~~~~  250 (364)
                      .+.++||+|+ +++|.+.++.+...|+ .|+.++++.++.+.+    +..+.  ..++..+-  . .+++.+.++.+.+.
T Consensus        13 ~~k~vlITGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~d~~~~~~~~~~~~~~~~~   91 (247)
T 3i1j_A           13 KGRVILVTGAARGIGAAAARAYAAHGA-SVVLLGRTEASLAEVSDQIKSAGQPQPLIIALNLENATAQQYRELAARVEHE   91 (247)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTSCCCEEEECCTTTCCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEecCHHHHHHHHHHHHhcCCCCceEEEeccccCCHHHHHHHHHHHHHh
Confidence            5789999998 9999999999999999 577777877665433    22331  22232222  2 22333333333332


Q ss_pred             cCCCccEEEECCCC
Q 017916          251 MGTGIDVSFDCAGF  264 (364)
Q Consensus       251 ~~~~~d~vid~~g~  264 (364)
                      . +++|++|+++|.
T Consensus        92 ~-g~id~lv~nAg~  104 (247)
T 3i1j_A           92 F-GRLDGLLHNASI  104 (247)
T ss_dssp             H-SCCSEEEECCCC
T ss_pred             C-CCCCEEEECCcc
Confidence            2 479999998873

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E

Probab=96.44  E-value=0.028  Score=48.06  Aligned_cols=81  Identities=20%  Similarity=0.270  Sum_probs=52.9

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHH-HHcCCC-eEEecCC-CcccHHHHHHHHHHHcCCCcc
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KELGAD-NIVKVST-NLQDIAEEVEKIQKAMGTGID  256 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~-~~lg~~-~~~~~~~-~~~~~~~~i~~~~~~~~~~~d  256 (364)
                      .|.++||+|+ +++|.+.++.+...|+ .|+.++++.++.+.+ +.++.. ..+..|- ..+++.+.++++.+.. +++|
T Consensus         8 ~gk~~lVTGas~gIG~a~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~-g~iD   85 (248)
T 3op4_A            8 EGKVALVTGASRGIGKAIAELLAERGA-KVIGTATSESGAQAISDYLGDNGKGMALNVTNPESIEAVLKAITDEF-GGVD   85 (248)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHH-CCCS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhcccceEEEEeCCCHHHHHHHHHHHHHHc-CCCC
Confidence            5789999998 9999999999999999 577777777665543 344422 1222222 2233444444443333 4799


Q ss_pred             EEEECCC
Q 017916          257 VSFDCAG  263 (364)
Q Consensus       257 ~vid~~g  263 (364)
                      ++|+++|
T Consensus        86 ~lv~nAg   92 (248)
T 3op4_A           86 ILVNNAG   92 (248)
T ss_dssp             EEEECCC
T ss_pred             EEEECCC
Confidence            9999987

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}

Probab=96.43  E-value=0.018  Score=49.61  Aligned_cols=81  Identities=27%  Similarity=0.342  Sum_probs=52.7

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHH-HHc---CCC-eEEecCC-CcccHHHHHHHHHHHcCC
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KEL---GAD-NIVKVST-NLQDIAEEVEKIQKAMGT  253 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~-~~l---g~~-~~~~~~~-~~~~~~~~i~~~~~~~~~  253 (364)
                      .+.++||+|+ +++|.+.++.+...|+ .|+.++++.++.+.+ +++   +.. ..+..|- ..+++.+.++.+.+.. +
T Consensus         5 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-g   82 (257)
T 3imf_A            5 KEKVVIITGGSSGMGKGMATRFAKEGA-RVVITGRTKEKLEEAKLEIEQFPGQILTVQMDVRNTDDIQKMIEQIDEKF-G   82 (257)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCCSTTCEEEEECCTTCHHHHHHHHHHHHHHH-S
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc-C
Confidence            4678999998 9999999999999999 577777887765544 333   222 1222222 2233444444443332 4


Q ss_pred             CccEEEECCC
Q 017916          254 GIDVSFDCAG  263 (364)
Q Consensus       254 ~~d~vid~~g  263 (364)
                      ++|++|+++|
T Consensus        83 ~id~lv~nAg   92 (257)
T 3imf_A           83 RIDILINNAA   92 (257)
T ss_dssp             CCCEEEECCC
T ss_pred             CCCEEEECCC
Confidence            7999999988

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}

Probab=96.42  E-value=0.025  Score=48.46  Aligned_cols=97  Identities=19%  Similarity=0.262  Sum_probs=61.0

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecC-CCcccHHHHHHHHHHHcCCCccEE
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVS-TNLQDIAEEVEKIQKAMGTGIDVS  258 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~-~~~~~~~~~i~~~~~~~~~~~d~v  258 (364)
                      -+.+|||+|+ |.+|.+.++.+...|+ .|++++++.++..      . ..+.++ ...+++.+.++.+.+ ..+++|++
T Consensus        21 m~k~vlITGas~gIG~~la~~l~~~G~-~V~~~~r~~~~~~------~-~~~~~d~~d~~~v~~~~~~~~~-~~g~iD~l   91 (251)
T 3orf_A           21 MSKNILVLGGSGALGAEVVKFFKSKSW-NTISIDFRENPNA------D-HSFTIKDSGEEEIKSVIEKINS-KSIKVDTF   91 (251)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCCTTS------S-EEEECSCSSHHHHHHHHHHHHT-TTCCEEEE
T ss_pred             cCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCccccc------c-cceEEEeCCHHHHHHHHHHHHH-HcCCCCEE
Confidence            3678999998 9999999999999999 5777777665422      1 111222 222333333443332 23479999


Q ss_pred             EECCCC-----------HH---------------HHHHHHHhcccCCEEEEEcC
Q 017916          259 FDCAGF-----------NK---------------TMSTALSATRAGGKVCLVGM  286 (364)
Q Consensus       259 id~~g~-----------~~---------------~~~~~~~~l~~~G~~v~~g~  286 (364)
                      |+++|.           .+               ..+.++..++++|+++.++.
T Consensus        92 i~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS  145 (251)
T 3orf_A           92 VCAAGGWSGGNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQGGLFVLTGA  145 (251)
T ss_dssp             EECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECC
T ss_pred             EECCccCCCCCcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhccCCEEEEEec
Confidence            999883           01               23345556667789998863

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}

Probab=96.42  E-value=0.025  Score=49.33  Aligned_cols=82  Identities=21%  Similarity=0.337  Sum_probs=52.3

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHH-H---HcCCC-eEEecCC-CcccHHHHHHHHHHHcCC
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-K---ELGAD-NIVKVST-NLQDIAEEVEKIQKAMGT  253 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~-~---~lg~~-~~~~~~~-~~~~~~~~i~~~~~~~~~  253 (364)
                      .|.++||+|+ +++|.+.++.+...|+ .|+.++++.++.+.+ +   ..+.. ..+..|- ..+++.+.++++.+.. +
T Consensus        31 ~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~-g  108 (276)
T 3r1i_A           31 SGKRALITGASTGIGKKVALAYAEAGA-QVAVAARHSDALQVVADEIAGVGGKALPIRCDVTQPDQVRGMLDQMTGEL-G  108 (276)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESSGGGGHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHH-S
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHc-C
Confidence            5789999998 9999999999999999 567777776554332 2   23322 2222222 2233444444443333 4


Q ss_pred             CccEEEECCCC
Q 017916          254 GIDVSFDCAGF  264 (364)
Q Consensus       254 ~~d~vid~~g~  264 (364)
                      ++|++|+++|.
T Consensus       109 ~iD~lvnnAg~  119 (276)
T 3r1i_A          109 GIDIAVCNAGI  119 (276)
T ss_dssp             CCSEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            79999999873

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}

Probab=96.41  E-value=0.023  Score=48.60  Aligned_cols=82  Identities=20%  Similarity=0.288  Sum_probs=52.4

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHH-HHc---CCC-eEEecCC-CcccHHHHHHHHHHHcCC
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KEL---GAD-NIVKVST-NLQDIAEEVEKIQKAMGT  253 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~-~~l---g~~-~~~~~~~-~~~~~~~~i~~~~~~~~~  253 (364)
                      .+.++||+|+ +.+|.+.++.+...|+ .|+.++++.++.+.+ +++   +.. ..+..+- ..+++.+.++.+.+.. +
T Consensus         8 ~~k~vlITGas~giG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-g   85 (253)
T 3qiv_A            8 ENKVGIVTGSGGGIGQAYAEALAREGA-AVVVADINAEAAEAVAKQIVADGGTAISVAVDVSDPESAKAMADRTLAEF-G   85 (253)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHH-S
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc-C
Confidence            4789999998 9999999999999999 577777777665433 222   322 1222222 2233333344333322 4


Q ss_pred             CccEEEECCCC
Q 017916          254 GIDVSFDCAGF  264 (364)
Q Consensus       254 ~~d~vid~~g~  264 (364)
                      ++|++|+++|.
T Consensus        86 ~id~li~~Ag~   96 (253)
T 3qiv_A           86 GIDYLVNNAAI   96 (253)
T ss_dssp             CCCEEEECCCC
T ss_pred             CCCEEEECCCc
Confidence            79999999874

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2

Probab=96.39  E-value=0.028  Score=47.91  Aligned_cols=82  Identities=22%  Similarity=0.248  Sum_probs=52.1

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHH----HHcCCCe-EEecCCC-cccHHHHHHHHHHHcCC
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA----KELGADN-IVKVSTN-LQDIAEEVEKIQKAMGT  253 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~----~~lg~~~-~~~~~~~-~~~~~~~i~~~~~~~~~  253 (364)
                      .+.++||+|+ +.+|.+.++.+...|+ .|+.++++.++.+.+    ++.+... .+..+-. .+++.+.++++.. ..+
T Consensus         4 ~~k~vlITGas~gIG~~~a~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~-~~~   81 (247)
T 3lyl_A            4 NEKVALVTGASRGIGFEVAHALASKGA-TVVGTATSQASAEKFENSMKEKGFKARGLVLNISDIESIQNFFAEIKA-ENL   81 (247)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH-TTC
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHH-HcC
Confidence            4678999998 9999999999988999 577777777654433    2334332 2222222 2333333444333 235


Q ss_pred             CccEEEECCCC
Q 017916          254 GIDVSFDCAGF  264 (364)
Q Consensus       254 ~~d~vid~~g~  264 (364)
                      ++|++|+++|.
T Consensus        82 ~id~li~~Ag~   92 (247)
T 3lyl_A           82 AIDILVNNAGI   92 (247)
T ss_dssp             CCSEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            79999999873

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}

Probab=96.39  E-value=0.026  Score=49.92  Aligned_cols=81  Identities=30%  Similarity=0.417  Sum_probs=52.6

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHH-HH---cCCCe-EEecCCC-cccHHHHHHHHHHHcCC
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KE---LGADN-IVKVSTN-LQDIAEEVEKIQKAMGT  253 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~-~~---lg~~~-~~~~~~~-~~~~~~~i~~~~~~~~~  253 (364)
                      .|.+|||+|+ |++|.+.++.+...|+ .|+.++++.++.+.+ ++   .+... .+..|-. .+++.+.++.+.... +
T Consensus        30 ~gk~vlVTGas~gIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~-g  107 (301)
T 3tjr_A           30 DGRAAVVTGGASGIGLATATEFARRGA-RLVLSDVDQPALEQAVNGLRGQGFDAHGVVCDVRHLDEMVRLADEAFRLL-G  107 (301)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH-S
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhC-C
Confidence            5789999998 9999999999999999 577777877665433 22   24322 2222222 233333344433322 4


Q ss_pred             CccEEEECCC
Q 017916          254 GIDVSFDCAG  263 (364)
Q Consensus       254 ~~d~vid~~g  263 (364)
                      ++|++|+++|
T Consensus       108 ~id~lvnnAg  117 (301)
T 3tjr_A          108 GVDVVFSNAG  117 (301)
T ss_dssp             SCSEEEECCC
T ss_pred             CCCEEEECCC
Confidence            7999999988

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}

Probab=96.39  E-value=0.026  Score=49.26  Aligned_cols=81  Identities=27%  Similarity=0.327  Sum_probs=53.4

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHH-HHHcCCCe-EEecCC-CcccHHHHHHHHHHHcCCCcc
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSV-AKELGADN-IVKVST-NLQDIAEEVEKIQKAMGTGID  256 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~-~~~lg~~~-~~~~~~-~~~~~~~~i~~~~~~~~~~~d  256 (364)
                      .+.++||+|+ +++|.+.++.+...|+ .|+.++++.++.+. .++++... .+..+- ..+++.+.++.+.+.. +++|
T Consensus        26 ~~k~vlVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~-g~iD  103 (277)
T 4dqx_A           26 NQRVCIVTGGGSGIGRATAELFAKNGA-YVVVADVNEDAAVRVANEIGSKAFGVRVDVSSAKDAESMVEKTTAKW-GRVD  103 (277)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHH-SCCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHc-CCCC
Confidence            4689999998 9999999999999999 57777777766543 34555432 222222 2233333444443332 4799


Q ss_pred             EEEECCC
Q 017916          257 VSFDCAG  263 (364)
Q Consensus       257 ~vid~~g  263 (364)
                      ++|+++|
T Consensus       104 ~lv~nAg  110 (277)
T 4dqx_A          104 VLVNNAG  110 (277)
T ss_dssp             EEEECCC
T ss_pred             EEEECCC
Confidence            9999988

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*

Probab=96.39  E-value=0.022  Score=48.75  Aligned_cols=81  Identities=21%  Similarity=0.297  Sum_probs=53.9

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHH-HHHcCCCeE-EecCC-CcccHHHHHHHHHHHcCCCcc
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSV-AKELGADNI-VKVST-NLQDIAEEVEKIQKAMGTGID  256 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~-~~~lg~~~~-~~~~~-~~~~~~~~i~~~~~~~~~~~d  256 (364)
                      .|.++||+|+ +++|.+.++.+...|+ .|+.++++.++.+. .++++.... +..|- ..+++.+.++.+.+.. +++|
T Consensus         5 ~gk~vlVTGas~gIG~a~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-g~id   82 (247)
T 3rwb_A            5 AGKTALVTGAAQGIGKAIAARLAADGA-TVIVSDINAEGAKAAAASIGKKARAIAADISDPGSVKALFAEIQALT-GGID   82 (247)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHHHCTTEEECCCCTTCHHHHHHHHHHHHHHH-SCCS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHC-CCCC
Confidence            5789999998 9999999999999999 57778777766544 345654322 11221 2233344444443332 4799


Q ss_pred             EEEECCC
Q 017916          257 VSFDCAG  263 (364)
Q Consensus       257 ~vid~~g  263 (364)
                      ++|+++|
T Consensus        83 ~lv~nAg   89 (247)
T 3rwb_A           83 ILVNNAS   89 (247)
T ss_dssp             EEEECCC
T ss_pred             EEEECCC
Confidence            9999988

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}

Probab=96.38  E-value=0.018  Score=49.80  Aligned_cols=83  Identities=22%  Similarity=0.239  Sum_probs=52.9

Q ss_pred             CCCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHH-H---HcCCC-eEEecCC-CcccHHHHHHHHHHHcC
Q 017916          180 GPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-K---ELGAD-NIVKVST-NLQDIAEEVEKIQKAMG  252 (364)
Q Consensus       180 ~~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~-~---~lg~~-~~~~~~~-~~~~~~~~i~~~~~~~~  252 (364)
                      -.+.+|||+|+ |++|.+.++.+...|+ .|+.++++.++.+.+ +   +.+.. ..+..+- ..+++.+.++.+.+.. 
T Consensus        27 l~~k~vlITGas~gIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~-  104 (262)
T 3rkr_A           27 LSGQVAVVTGASRGIGAAIARKLGSLGA-RVVLTARDVEKLRAVEREIVAAGGEAESHACDLSHSDAIAAFATGVLAAH-  104 (262)
T ss_dssp             TTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHhc-
Confidence            35789999998 9999999999888999 577777777665433 2   23332 1222222 2233333444443332 


Q ss_pred             CCccEEEECCCC
Q 017916          253 TGIDVSFDCAGF  264 (364)
Q Consensus       253 ~~~d~vid~~g~  264 (364)
                      +++|++|+++|.
T Consensus       105 g~id~lv~~Ag~  116 (262)
T 3rkr_A          105 GRCDVLVNNAGV  116 (262)
T ss_dssp             SCCSEEEECCCC
T ss_pred             CCCCEEEECCCc
Confidence            479999999884

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2

Probab=96.38  E-value=0.023  Score=49.54  Aligned_cols=81  Identities=21%  Similarity=0.272  Sum_probs=50.8

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHH----HHcCC-Ce--EEecCCC-cccHHHHHHHHHHHc
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA----KELGA-DN--IVKVSTN-LQDIAEEVEKIQKAM  251 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~----~~lg~-~~--~~~~~~~-~~~~~~~i~~~~~~~  251 (364)
                      .+.++||+|+ |.+|.+.++.+...|+ .|++++++.++.+.+    +..+. ..  .+..|-. .+++.+.++.+....
T Consensus        31 ~~k~vlVTGasggIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  109 (279)
T 1xg5_A           31 RDRLALVTGASGGIGAAVARALVQQGL-KVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQH  109 (279)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHHHHhC
Confidence            4679999998 9999999999988999 577777776654432    22332 11  2222221 233333343333322


Q ss_pred             CCCccEEEECCC
Q 017916          252 GTGIDVSFDCAG  263 (364)
Q Consensus       252 ~~~~d~vid~~g  263 (364)
                       +++|++|+++|
T Consensus       110 -g~iD~vi~~Ag  120 (279)
T 1xg5_A          110 -SGVDICINNAG  120 (279)
T ss_dssp             -CCCSEEEECCC
T ss_pred             -CCCCEEEECCC
Confidence             47999999987

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*

Probab=96.37  E-value=0.031  Score=47.71  Aligned_cols=81  Identities=28%  Similarity=0.388  Sum_probs=51.5

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHH-HHc---CCC-eEEecCC-CcccHHHHHHHHHHHcCC
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KEL---GAD-NIVKVST-NLQDIAEEVEKIQKAMGT  253 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~-~~l---g~~-~~~~~~~-~~~~~~~~i~~~~~~~~~  253 (364)
                      .+.++||+|+ |++|.+.++.+...|+ .|+.++++.++.+.+ +++   +.. ..+..|- ..+++.+.++.+.+.. +
T Consensus         6 ~~k~~lVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~-g   83 (247)
T 2jah_A            6 QGKVALITGASSGIGEATARALAAEGA-AVAIAARRVEKLRALGDELTAAGAKVHVLELDVADRQGVDAAVASTVEAL-G   83 (247)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH-S
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc-C
Confidence            4678999998 9999999999999999 577777777665432 222   432 2222222 2233333444333322 4


Q ss_pred             CccEEEECCC
Q 017916          254 GIDVSFDCAG  263 (364)
Q Consensus       254 ~~d~vid~~g  263 (364)
                      ++|++|+++|
T Consensus        84 ~id~lv~nAg   93 (247)
T 2jah_A           84 GLDILVNNAG   93 (247)
T ss_dssp             CCSEEEECCC
T ss_pred             CCCEEEECCC
Confidence            7999999887

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}

Probab=96.37  E-value=0.022  Score=49.59  Aligned_cols=82  Identities=18%  Similarity=0.240  Sum_probs=53.1

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHH-HHHcCCC-eEEecCC-CcccHHHHHHHHHHHcCCCcc
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSV-AKELGAD-NIVKVST-NLQDIAEEVEKIQKAMGTGID  256 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~-~~~lg~~-~~~~~~~-~~~~~~~~i~~~~~~~~~~~d  256 (364)
                      .+.++||+|+ +++|.+.++.+...|+ .|+.++++.++.+. .++++.. ..+..|- ..+++.+.++.+.+.. +++|
T Consensus        27 ~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~-g~iD  104 (272)
T 4dyv_A           27 GKKIAIVTGAGSGVGRAVAVALAGAGY-GVALAGRRLDALQETAAEIGDDALCVPTDVTDPDSVRALFTATVEKF-GRVD  104 (272)
T ss_dssp             -CCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHTSCCEEEECCTTSHHHHHHHHHHHHHHH-SCCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHc-CCCC
Confidence            5678999998 9999999999999999 57777777766543 3455532 2222222 2233344444443332 4799


Q ss_pred             EEEECCCC
Q 017916          257 VSFDCAGF  264 (364)
Q Consensus       257 ~vid~~g~  264 (364)
                      ++|+++|.
T Consensus       105 ~lVnnAg~  112 (272)
T 4dyv_A          105 VLFNNAGT  112 (272)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCC
Confidence            99999874

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}

Probab=96.36  E-value=0.041  Score=45.93  Aligned_cols=91  Identities=14%  Similarity=0.161  Sum_probs=59.5

Q ss_pred             EEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcCCCccEEEECC
Q 017916          184 NVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCA  262 (364)
Q Consensus       184 ~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid~~  262 (364)
                      +|||+|+ |.+|...++.+...|. .|++++++.++...+...++.. +..+-.+.+.    +.+     .++|+||+++
T Consensus         2 kilVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~~~~-~~~D~~d~~~----~~~-----~~~d~vi~~a   70 (224)
T 3h2s_A            2 KIAVLGATGRAGSAIVAEARRRGH-EVLAVVRDPQKAADRLGATVAT-LVKEPLVLTE----ADL-----DSVDAVVDAL   70 (224)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHTCTTSEE-EECCGGGCCH----HHH-----TTCSEEEECC
T ss_pred             EEEEEcCCCHHHHHHHHHHHHCCC-EEEEEEecccccccccCCCceE-EecccccccH----hhc-----ccCCEEEECC
Confidence            6999998 9999999999998998 6777778877765443334332 2222211221    222     4799999999


Q ss_pred             CCH----------HHHHHHHHhccc-CCEEEEEc
Q 017916          263 GFN----------KTMSTALSATRA-GGKVCLVG  285 (364)
Q Consensus       263 g~~----------~~~~~~~~~l~~-~G~~v~~g  285 (364)
                      |..          .....+++.++. +++++.++
T Consensus        71 g~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~S  104 (224)
T 3h2s_A           71 SVPWGSGRGYLHLDFATHLVSLLRNSDTLAVFIL  104 (224)
T ss_dssp             CCCTTSSCTHHHHHHHHHHHHTCTTCCCEEEEEC
T ss_pred             ccCCCcchhhHHHHHHHHHHHHHHHcCCcEEEEe
Confidence            851          234456666654 46888775

>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38

Probab=96.36  E-value=0.032  Score=49.65  Aligned_cols=103  Identities=24%  Similarity=0.297  Sum_probs=68.2

Q ss_pred             HHcCCCCCCEEEEEcCCHHHHHHHHHHHHCC-CCEEEEEecChhHHHHHHH----cCCCeEEecCCCcccHHHHHHHHHH
Q 017916          175 RRANIGPETNVLIMGAGPIGLVTMLGARAFG-APRIVIVDVDDYRLSVAKE----LGADNIVKVSTNLQDIAEEVEKIQK  249 (364)
Q Consensus       175 ~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g-~~~vv~~~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~i~~~~~  249 (364)
                      ....+++|++||=.|+|. |..+.++++.++ ...|++++.++++.+.+++    +|...+........++..       
T Consensus       112 ~~l~~~~g~~VLDlg~G~-G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~~~~~g~~~v~~~~~D~~~~~~-------  183 (315)
T 1ixk_A          112 VALDPKPGEIVADMAAAP-GGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRLGVLNVILFHSSSLHIGE-------  183 (315)
T ss_dssp             HHHCCCTTCEEEECCSSC-SHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHTCCSEEEESSCGGGGGG-------
T ss_pred             HHhCCCCCCEEEEeCCCC-CHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHHhCCCeEEEEECChhhccc-------
Confidence            445788999999888754 567778888763 3479999999988777654    465433222222122110       


Q ss_pred             HcCCCccEEEE---CCCC-------------------------HHHHHHHHHhcccCCEEEEEcC
Q 017916          250 AMGTGIDVSFD---CAGF-------------------------NKTMSTALSATRAGGKVCLVGM  286 (364)
Q Consensus       250 ~~~~~~d~vid---~~g~-------------------------~~~~~~~~~~l~~~G~~v~~g~  286 (364)
                       ....+|.|+-   |+|.                         ...+..+++.|+++|+++....
T Consensus       184 -~~~~fD~Il~d~Pcsg~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~LkpGG~lv~stc  247 (315)
T 1ixk_A          184 -LNVEFDKILLDAPCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPGGILVYSTC  247 (315)
T ss_dssp             -GCCCEEEEEEECCTTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEES
T ss_pred             -ccccCCEEEEeCCCCCcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEeC
Confidence             1457999874   4332                         2567789999999999987643

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}

Probab=96.36  E-value=0.028  Score=49.15  Aligned_cols=82  Identities=21%  Similarity=0.304  Sum_probs=52.9

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHH-HHc---CCCe-EEecCC-CcccHHHHHHHHHHHcCC
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KEL---GADN-IVKVST-NLQDIAEEVEKIQKAMGT  253 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~-~~l---g~~~-~~~~~~-~~~~~~~~i~~~~~~~~~  253 (364)
                      ++.++||+|+ +++|.+.++.+...|+ .|+.++++.++.+.+ +++   +... .+..|- ..+++.+.++++.+.. +
T Consensus        27 ~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~-g  104 (283)
T 3v8b_A           27 PSPVALITGAGSGIGRATALALAADGV-TVGALGRTRTEVEEVADEIVGAGGQAIALEADVSDELQMRNAVRDLVLKF-G  104 (283)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHTTTTCCEEEEECCTTCHHHHHHHHHHHHHHH-S
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHh-C
Confidence            5689999998 9999999999999999 577777777665433 333   2221 222222 2233444444443332 4


Q ss_pred             CccEEEECCCC
Q 017916          254 GIDVSFDCAGF  264 (364)
Q Consensus       254 ~~d~vid~~g~  264 (364)
                      ++|++|+++|.
T Consensus       105 ~iD~lVnnAg~  115 (283)
T 3v8b_A          105 HLDIVVANAGI  115 (283)
T ss_dssp             CCCEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            79999998873

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}

Probab=96.36  E-value=0.018  Score=49.88  Aligned_cols=82  Identities=23%  Similarity=0.271  Sum_probs=52.1

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHH-HH---cCCCe-EEecCC-CcccHHHHHHHHHHHcCC
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KE---LGADN-IVKVST-NLQDIAEEVEKIQKAMGT  253 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~-~~---lg~~~-~~~~~~-~~~~~~~~i~~~~~~~~~  253 (364)
                      .+.++||+|+ +++|.+.++.+...|+ .|+.++++.++.+.+ ++   .+... .+..+- ..+++.+.++.+.+.. +
T Consensus         3 ~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~-g   80 (264)
T 3tfo_A            3 MDKVILITGASGGIGEGIARELGVAGA-KILLGARRQARIEAIATEIRDAGGTALAQVLDVTDRHSVAAFAQAAVDTW-G   80 (264)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHH-S
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc-C
Confidence            4678999998 9999999999999999 577777777665433 22   24322 222222 2233344444443322 4


Q ss_pred             CccEEEECCCC
Q 017916          254 GIDVSFDCAGF  264 (364)
Q Consensus       254 ~~d~vid~~g~  264 (364)
                      ++|++|+++|.
T Consensus        81 ~iD~lVnnAG~   91 (264)
T 3tfo_A           81 RIDVLVNNAGV   91 (264)
T ss_dssp             CCCEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            79999999873

>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1

Probab=96.34  E-value=0.007  Score=54.07  Aligned_cols=103  Identities=24%  Similarity=0.304  Sum_probs=68.9

Q ss_pred             HHHHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCC-CEEEEEecChhHHHHHHH----cCCCeEEecCCCcccHHHHHHHH
Q 017916          173 ACRRANIGPETNVLIMGAGPIGLVTMLGARAFGA-PRIVIVDVDDYRLSVAKE----LGADNIVKVSTNLQDIAEEVEKI  247 (364)
Q Consensus       173 ~l~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~-~~vv~~~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~i~~~  247 (364)
                      .++...++++++||-.|+|. |..+..+++..+. ..|++++.+++..+.+++    .|...+.....   +..+...  
T Consensus        67 l~~~l~~~~~~~VLDiGcG~-G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g~~~v~~~~~---d~~~~~~--  140 (317)
T 1dl5_A           67 FMEWVGLDKGMRVLEIGGGT-GYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCG---DGYYGVP--  140 (317)
T ss_dssp             HHHHTTCCTTCEEEEECCTT-SHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEES---CGGGCCG--
T ss_pred             HHHhcCCCCcCEEEEecCCc-hHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCCeEEEEC---Chhhccc--
Confidence            34667889999999999866 7788888887542 469999999988777664    35443211111   1111000  


Q ss_pred             HHHcCCCccEEEECCCCHHHHHHHHHhcccCCEEEEE
Q 017916          248 QKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLV  284 (364)
Q Consensus       248 ~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~  284 (364)
                         ..+.+|+|+...........+.+.|+|+|+++..
T Consensus       141 ---~~~~fD~Iv~~~~~~~~~~~~~~~LkpgG~lvi~  174 (317)
T 1dl5_A          141 ---EFSPYDVIFVTVGVDEVPETWFTQLKEGGRVIVP  174 (317)
T ss_dssp             ---GGCCEEEEEECSBBSCCCHHHHHHEEEEEEEEEE
T ss_pred             ---cCCCeEEEEEcCCHHHHHHHHHHhcCCCcEEEEE
Confidence               1257999997654333446788999999998876

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=96.33  E-value=0.037  Score=47.82  Aligned_cols=83  Identities=23%  Similarity=0.198  Sum_probs=53.0

Q ss_pred             CCCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHH-H---HcCCCe-EEecCC-CcccHHHHHHHHHHHcC
Q 017916          180 GPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-K---ELGADN-IVKVST-NLQDIAEEVEKIQKAMG  252 (364)
Q Consensus       180 ~~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~-~---~lg~~~-~~~~~~-~~~~~~~~i~~~~~~~~  252 (364)
                      -.+.++||+|+ +.+|.+.++.+...|+ .|+.++++.++.+.+ +   +.+... .+..|- ..+++.+.++++.+. -
T Consensus         9 l~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~-~   86 (264)
T 3ucx_A            9 LTDKVVVISGVGPALGTTLARRCAEQGA-DLVLAARTVERLEDVAKQVTDTGRRALSVGTDITDDAQVAHLVDETMKA-Y   86 (264)
T ss_dssp             TTTCEEEEESCCTTHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH-T
T ss_pred             cCCcEEEEECCCcHHHHHHHHHHHHCcC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH-c
Confidence            35789999998 9999999999999999 577777777665433 2   234322 222222 223334444444333 3


Q ss_pred             CCccEEEECCCC
Q 017916          253 TGIDVSFDCAGF  264 (364)
Q Consensus       253 ~~~d~vid~~g~  264 (364)
                      +++|++|+++|.
T Consensus        87 g~id~lv~nAg~   98 (264)
T 3ucx_A           87 GRVDVVINNAFR   98 (264)
T ss_dssp             SCCSEEEECCCS
T ss_pred             CCCcEEEECCCC
Confidence            479999998864

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2

Probab=96.33  E-value=0.032  Score=48.21  Aligned_cols=81  Identities=25%  Similarity=0.326  Sum_probs=51.5

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHH-HHc-----CCCe-EEecCC-CcccHHHHHHHHHHHc
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KEL-----GADN-IVKVST-NLQDIAEEVEKIQKAM  251 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~-~~l-----g~~~-~~~~~~-~~~~~~~~i~~~~~~~  251 (364)
                      .+.++||+|+ |.+|.+.++.+...|+ .|+.++++.++.+.+ +++     +... .+..|- ..+++.+.++...+..
T Consensus        12 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   90 (267)
T 1iy8_A           12 TDRVVLITGGGSGLGRATAVRLAAEGA-KLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTERF   90 (267)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            4689999998 9999999999988999 577777777654432 222     3322 222222 2233444444443322


Q ss_pred             CCCccEEEECCC
Q 017916          252 GTGIDVSFDCAG  263 (364)
Q Consensus       252 ~~~~d~vid~~g  263 (364)
                       +++|++|+++|
T Consensus        91 -g~id~lv~nAg  101 (267)
T 1iy8_A           91 -GRIDGFFNNAG  101 (267)
T ss_dssp             -SCCSEEEECCC
T ss_pred             -CCCCEEEECCC
Confidence             47999999987

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}

Probab=96.32  E-value=0.022  Score=49.86  Aligned_cols=82  Identities=20%  Similarity=0.215  Sum_probs=51.5

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHH-HHc----CCC-eEEecCC-CcccHHHHHHHHHHHcC
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KEL----GAD-NIVKVST-NLQDIAEEVEKIQKAMG  252 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~-~~l----g~~-~~~~~~~-~~~~~~~~i~~~~~~~~  252 (364)
                      .|.++||+|+ +++|.+.++.+...|+ .|+.++++.++.+.+ +++    +.. ..+..|- ..+++.+.++.+.+.. 
T Consensus        32 ~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~-  109 (281)
T 4dry_A           32 EGRIALVTGGGTGVGRGIAQALSAEGY-SVVITGRRPDVLDAAAGEIGGRTGNIVRAVVCDVGDPDQVAALFAAVRAEF-  109 (281)
T ss_dssp             --CEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCeEEEEEcCCCCHHHHHHHHHHHHHHc-
Confidence            5789999998 9999999999999999 577777777665433 222    211 2233222 2233444444443332 


Q ss_pred             CCccEEEECCCC
Q 017916          253 TGIDVSFDCAGF  264 (364)
Q Consensus       253 ~~~d~vid~~g~  264 (364)
                      +++|++|+++|.
T Consensus       110 g~iD~lvnnAG~  121 (281)
T 4dry_A          110 ARLDLLVNNAGS  121 (281)
T ss_dssp             SCCSEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            479999999874

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*

Probab=96.32  E-value=0.042  Score=47.84  Aligned_cols=81  Identities=23%  Similarity=0.276  Sum_probs=51.7

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHH-HHHc---CCCe-EEecCC-CcccHHHHHHHHHHHcCC
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSV-AKEL---GADN-IVKVST-NLQDIAEEVEKIQKAMGT  253 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~-~~~l---g~~~-~~~~~~-~~~~~~~~i~~~~~~~~~  253 (364)
                      .+.++||+|+ |.+|.+.++.+...|+ .|++++++.++.+. .+++   +... .+..+- ..+++.+.++.+.+. -+
T Consensus        21 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~-~g   98 (277)
T 2rhc_B           21 DSEVALVTGATSGIGLEIARRLGKEGL-RVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVER-YG   98 (277)
T ss_dssp             TSCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH-TC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHH-hC
Confidence            4678999998 9999999999999999 57777777765433 2222   4322 222222 223333344444332 34


Q ss_pred             CccEEEECCC
Q 017916          254 GIDVSFDCAG  263 (364)
Q Consensus       254 ~~d~vid~~g  263 (364)
                      ++|++|+++|
T Consensus        99 ~iD~lv~~Ag  108 (277)
T 2rhc_B           99 PVDVLVNNAG  108 (277)
T ss_dssp             SCSEEEECCC
T ss_pred             CCCEEEECCC
Confidence            7999999987

>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*

Probab=96.32  E-value=0.02  Score=49.11  Aligned_cols=92  Identities=21%  Similarity=0.315  Sum_probs=57.7

Q ss_pred             CCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecCh-------------------hHHHHH----HHcCCC-eEEecCCCc
Q 017916          182 ETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDD-------------------YRLSVA----KELGAD-NIVKVSTNL  237 (364)
Q Consensus       182 g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~-------------------~~~~~~----~~lg~~-~~~~~~~~~  237 (364)
                      +.+|+|.|+|++|..+++.+...|...+..++.+.                   .|.+.+    ++++.. .+..+...-
T Consensus        31 ~~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~~~~~  110 (249)
T 1jw9_B           31 DSRVLIVGLGGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPVNALL  110 (249)
T ss_dssp             HCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEECSCC
T ss_pred             CCeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHHHCCCcEEEEEeccC
Confidence            46899999999999999999999998888888775                   555443    233322 222222111


Q ss_pred             ccHHHHHHHHHHHcCCCccEEEECCCCHHHHHHHHHhcccCC
Q 017916          238 QDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGG  279 (364)
Q Consensus       238 ~~~~~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G  279 (364)
                       + .+.+.++.    .++|+||||+.+.+....+.+.....|
T Consensus       111 -~-~~~~~~~~----~~~DvVi~~~d~~~~~~~l~~~~~~~~  146 (249)
T 1jw9_B          111 -D-DAELAALI----AEHDLVLDCTDNVAVRNQLNAGCFAAK  146 (249)
T ss_dssp             -C-HHHHHHHH----HTSSEEEECCSSHHHHHHHHHHHHHHT
T ss_pred             -C-HhHHHHHH----hCCCEEEEeCCCHHHHHHHHHHHHHcC
Confidence             1 11223332    369999999998765544444444333

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}

Probab=96.32  E-value=0.018  Score=50.75  Aligned_cols=82  Identities=23%  Similarity=0.272  Sum_probs=52.0

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHH-HHHcCC---C--eEEecCCC-cccHHHHHHHHHHHcC
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSV-AKELGA---D--NIVKVSTN-LQDIAEEVEKIQKAMG  252 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~-~~~lg~---~--~~~~~~~~-~~~~~~~i~~~~~~~~  252 (364)
                      .+.++||+|+ +++|.+.++.+...|+ .|+.++++.++.+. .+++..   .  ..+..|-. .+++.+.++.+.+.. 
T Consensus        40 ~~k~vlVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~-  117 (293)
T 3rih_A           40 SARSVLVTGGTKGIGRGIATVFARAGA-NVAVAARSPRELSSVTAELGELGAGNVIGVRLDVSDPGSCADAARTVVDAF-  117 (293)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSGGGGHHHHHHHTTSSSSCEEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhhCCCcEEEEEEeCCCHHHHHHHHHHHHHHc-
Confidence            5789999998 9999999999999999 57777777665443 334421   1  12222222 233333444443332 


Q ss_pred             CCccEEEECCCC
Q 017916          253 TGIDVSFDCAGF  264 (364)
Q Consensus       253 ~~~d~vid~~g~  264 (364)
                      +++|++|+++|.
T Consensus       118 g~iD~lvnnAg~  129 (293)
T 3rih_A          118 GALDVVCANAGI  129 (293)
T ss_dssp             SCCCEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            479999999873

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*

Probab=96.32  E-value=0.027  Score=48.38  Aligned_cols=82  Identities=27%  Similarity=0.317  Sum_probs=52.8

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHH-HHHcCCCe-EEecCC-CcccHHHHHHHHHHHcCCCcc
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSV-AKELGADN-IVKVST-NLQDIAEEVEKIQKAMGTGID  256 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~-~~~lg~~~-~~~~~~-~~~~~~~~i~~~~~~~~~~~d  256 (364)
                      .+.++||+|+ |.+|.+.++.+...|+ .|+.+++++++.+. .++++... .+..+- ..+++.+.++++.+.. +++|
T Consensus         4 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-g~iD   81 (254)
T 1hdc_A            4 SGKTVIITGGARGLGAEAARQAVAAGA-RVVLADVLDEEGAATARELGDAARYQHLDVTIEEDWQRVVAYAREEF-GSVD   81 (254)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTTGGGEEEEECCTTCHHHHHHHHHHHHHHH-SCCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHHc-CCCC
Confidence            4678999998 9999999999999999 57777777766543 34454321 222222 2233444444443322 3799


Q ss_pred             EEEECCCC
Q 017916          257 VSFDCAGF  264 (364)
Q Consensus       257 ~vid~~g~  264 (364)
                      ++|+++|.
T Consensus        82 ~lv~nAg~   89 (254)
T 1hdc_A           82 GLVNNAGI   89 (254)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCC
Confidence            99999873

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*

Probab=96.31  E-value=0.026  Score=49.31  Aligned_cols=82  Identities=27%  Similarity=0.267  Sum_probs=54.3

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHH-HHcCCCe-EEecCC-CcccHHHHHHHHHHHcCCCcc
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KELGADN-IVKVST-NLQDIAEEVEKIQKAMGTGID  256 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~-~~lg~~~-~~~~~~-~~~~~~~~i~~~~~~~~~~~d  256 (364)
                      .|.++||+|+ +++|.+.++.+...|+ .|+.++++.++.+.+ +.++... .+..+- ..+++.+.++++.... +++|
T Consensus         4 ~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-g~iD   81 (281)
T 3zv4_A            4 TGEVALITGGASGLGRALVDRFVAEGA-RVAVLDKSAERLRELEVAHGGNAVGVVGDVRSLQDQKRAAERCLAAF-GKID   81 (281)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTBTTEEEEECCTTCHHHHHHHHHHHHHHH-SCCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCcC-EEEEEeCCHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHHHHHhc-CCCC
Confidence            4679999998 9999999999999999 677777877766544 4454332 222222 2233444444443333 4799


Q ss_pred             EEEECCCC
Q 017916          257 VSFDCAGF  264 (364)
Q Consensus       257 ~vid~~g~  264 (364)
                      ++|+++|.
T Consensus        82 ~lvnnAg~   89 (281)
T 3zv4_A           82 TLIPNAGI   89 (281)
T ss_dssp             EEECCCCC
T ss_pred             EEEECCCc
Confidence            99999873

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}

Probab=96.31  E-value=0.032  Score=48.01  Aligned_cols=81  Identities=26%  Similarity=0.281  Sum_probs=54.2

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHH-HHcCCCe-EEecCC-CcccHHHHHHHHHHHcCCCcc
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KELGADN-IVKVST-NLQDIAEEVEKIQKAMGTGID  256 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~-~~lg~~~-~~~~~~-~~~~~~~~i~~~~~~~~~~~d  256 (364)
                      .+.++||+|+ +++|.+.++.+...|+ .|+.++++.++.+.+ ++++... .+..+- ..+++.+.++++.+.. +++|
T Consensus         8 ~~k~vlITGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-g~id   85 (261)
T 3n74_A            8 EGKVALITGAGSGFGEGMAKRFAKGGA-KVVIVDRDKAGAERVAGEIGDAALAVAADISKEADVDAAVEAALSKF-GKVD   85 (261)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHH-SCCC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHhc-CCCC
Confidence            4679999998 9999999999999999 577787887776544 4565432 222222 2233444444443333 4799


Q ss_pred             EEEECCC
Q 017916          257 VSFDCAG  263 (364)
Q Consensus       257 ~vid~~g  263 (364)
                      ++|+++|
T Consensus        86 ~li~~Ag   92 (261)
T 3n74_A           86 ILVNNAG   92 (261)
T ss_dssp             EEEECCC
T ss_pred             EEEECCc
Confidence            9999887

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}

Probab=96.31  E-value=0.022  Score=49.74  Aligned_cols=82  Identities=27%  Similarity=0.347  Sum_probs=52.0

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHH-HH---cCCC--e--EEecCC-CcccHHHHHHHHHHH
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KE---LGAD--N--IVKVST-NLQDIAEEVEKIQKA  250 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~-~~---lg~~--~--~~~~~~-~~~~~~~~i~~~~~~  250 (364)
                      .+.++||+|+ +.+|.+.++.+...|+ .|+.++++.++.+.. ++   .+..  .  .+..|- ..+++.+.++...+.
T Consensus        10 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   88 (281)
T 3svt_A           10 QDRTYLVTGGGSGIGKGVAAGLVAAGA-SVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARAVDAVTAW   88 (281)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHHHHHHHHH
Confidence            4689999998 9999999999989999 577777777654432 22   3321  1  222221 223334444444333


Q ss_pred             cCCCccEEEECCCC
Q 017916          251 MGTGIDVSFDCAGF  264 (364)
Q Consensus       251 ~~~~~d~vid~~g~  264 (364)
                      . +++|++|+++|.
T Consensus        89 ~-g~id~lv~nAg~  101 (281)
T 3svt_A           89 H-GRLHGVVHCAGG  101 (281)
T ss_dssp             H-SCCCEEEECCCC
T ss_pred             c-CCCCEEEECCCc
Confidence            2 479999999884

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}

Probab=96.30  E-value=0.032  Score=48.61  Aligned_cols=81  Identities=21%  Similarity=0.265  Sum_probs=51.1

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHH-HHHcCC--C-eEEecCC-CcccHHHHHHHHHHHcCCC
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSV-AKELGA--D-NIVKVST-NLQDIAEEVEKIQKAMGTG  254 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~-~~~lg~--~-~~~~~~~-~~~~~~~~i~~~~~~~~~~  254 (364)
                      .+.++||+|+ |.+|.+.++.+...|+ .|++++++.++.+. .+++..  . ..+..|- ..+++.+.++++.+. -++
T Consensus        28 ~~k~vlVTGas~gIG~aia~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~-~g~  105 (276)
T 2b4q_A           28 AGRIALVTGGSRGIGQMIAQGLLEAGA-RVFICARDAEACADTATRLSAYGDCQAIPADLSSEAGARRLAQALGEL-SAR  105 (276)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHHHTTSSCEEECCCCTTSHHHHHHHHHHHHHH-CSC
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCceEEEEeeCCCHHHHHHHHHHHHHh-cCC
Confidence            4679999998 9999999999999999 57777777766543 333321  1 1111121 122333333333332 347


Q ss_pred             ccEEEECCC
Q 017916          255 IDVSFDCAG  263 (364)
Q Consensus       255 ~d~vid~~g  263 (364)
                      +|++|+++|
T Consensus       106 iD~lvnnAg  114 (276)
T 2b4q_A          106 LDILVNNAG  114 (276)
T ss_dssp             CSEEEECCC
T ss_pred             CCEEEECCC
Confidence            999999987

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}

Probab=96.30  E-value=0.023  Score=48.92  Aligned_cols=82  Identities=17%  Similarity=0.198  Sum_probs=52.3

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHH----HHcCCCe-EEecCCC-cccHHHHHHHHHHHcCC
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA----KELGADN-IVKVSTN-LQDIAEEVEKIQKAMGT  253 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~----~~lg~~~-~~~~~~~-~~~~~~~i~~~~~~~~~  253 (364)
                      .|.++||+|+ +++|.+.++.+...|+ .|+.++++.++.+.+    +..+... .+..+-. .+++.+.++.+.+.. +
T Consensus        11 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~-g   88 (256)
T 3gaf_A           11 NDAVAIVTGAAAGIGRAIAGTFAKAGA-SVVVTDLKSEGAEAVAAAIRQAGGKAIGLECNVTDEQHREAVIKAALDQF-G   88 (256)
T ss_dssp             TTCEEEECSCSSHHHHHHHHHHHHHTC-EEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH-S
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc-C
Confidence            5789999998 9999999998888899 577777777655433    2334332 2222222 233333444443332 4


Q ss_pred             CccEEEECCCC
Q 017916          254 GIDVSFDCAGF  264 (364)
Q Consensus       254 ~~d~vid~~g~  264 (364)
                      ++|++|+++|.
T Consensus        89 ~id~lv~nAg~   99 (256)
T 3gaf_A           89 KITVLVNNAGG   99 (256)
T ss_dssp             CCCEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            79999999873

>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*

Probab=96.30  E-value=0.029  Score=48.40  Aligned_cols=82  Identities=13%  Similarity=0.103  Sum_probs=52.8

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHH---HHHcCCC-eEEecC-CCcccHHHHHHHHHHHcCCC
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSV---AKELGAD-NIVKVS-TNLQDIAEEVEKIQKAMGTG  254 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~---~~~lg~~-~~~~~~-~~~~~~~~~i~~~~~~~~~~  254 (364)
                      +|.++||+|+ +++|.+.++.+...|+ .|+.++++.++.+.   +.+.+.. ..+..+ ....+..+.+++..+.. ++
T Consensus         6 ~gKvalVTGas~GIG~aia~~la~~Ga-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~-G~   83 (258)
T 4gkb_A            6 QDKVVIVTGGASGIGGAISMRLAEERA-IPVVFARHAPDGAFLDALAQRQPRATYLPVELQDDAQCRDAVAQTIATF-GR   83 (258)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCCCHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHH-SC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEECCcccHHHHHHHHhcCCCEEEEEeecCCHHHHHHHHHHHHHHh-CC
Confidence            5789999997 9999999999989999 56666665544333   3334432 222222 22344444455444433 47


Q ss_pred             ccEEEECCCC
Q 017916          255 IDVSFDCAGF  264 (364)
Q Consensus       255 ~d~vid~~g~  264 (364)
                      +|++++++|.
T Consensus        84 iDiLVNnAGi   93 (258)
T 4gkb_A           84 LDGLVNNAGV   93 (258)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999874

>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*

Probab=96.29  E-value=0.0019  Score=55.10  Aligned_cols=99  Identities=13%  Similarity=0.123  Sum_probs=65.0

Q ss_pred             CCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCC---eEEecCCCcccHHHHHHHHHHHcCCCc
Q 017916          179 IGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGAD---NIVKVSTNLQDIAEEVEKIQKAMGTGI  255 (364)
Q Consensus       179 ~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~---~~~~~~~~~~~~~~~i~~~~~~~~~~~  255 (364)
                      ..+|.+||-.|.|. |..+..+++..+. .+++++.+++-.+.+++....   .+..+   ..++.+....+   ....|
T Consensus        58 ~~~G~rVLdiG~G~-G~~~~~~~~~~~~-~v~~id~~~~~~~~a~~~~~~~~~~~~~~---~~~a~~~~~~~---~~~~F  129 (236)
T 3orh_A           58 SSKGGRVLEVGFGM-AIAASKVQEAPID-EHWIIECNDGVFQRLRDWAPRQTHKVIPL---KGLWEDVAPTL---PDGHF  129 (236)
T ss_dssp             TTTCEEEEEECCTT-SHHHHHHTTSCEE-EEEEEECCHHHHHHHHHHGGGCSSEEEEE---ESCHHHHGGGS---CTTCE
T ss_pred             ccCCCeEEEECCCc-cHHHHHHHHhCCc-EEEEEeCCHHHHHHHHHHHhhCCCceEEE---eehHHhhcccc---cccCC
Confidence            37899999999764 7778888877665 688999999888888764321   11111   12222221111   23568


Q ss_pred             cEE-EECCCC----------HHHHHHHHHhcccCCEEEEEc
Q 017916          256 DVS-FDCAGF----------NKTMSTALSATRAGGKVCLVG  285 (364)
Q Consensus       256 d~v-id~~g~----------~~~~~~~~~~l~~~G~~v~~g  285 (364)
                      |.| +|+...          ...+.++.++|+|||+++.+.
T Consensus       130 D~i~~D~~~~~~~~~~~~~~~~~~~e~~rvLkPGG~l~f~~  170 (236)
T 3orh_A          130 DGILYDTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYCN  170 (236)
T ss_dssp             EEEEECCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEECC
T ss_pred             ceEEEeeeecccchhhhcchhhhhhhhhheeCCCCEEEEEe
Confidence            887 465432          245678999999999998874

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A

Probab=96.28  E-value=0.019  Score=49.61  Aligned_cols=83  Identities=18%  Similarity=0.261  Sum_probs=51.6

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHH-HHH---cCCCe-EEecCCC-cccHHHHHHHHHHHcCC
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSV-AKE---LGADN-IVKVSTN-LQDIAEEVEKIQKAMGT  253 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~-~~~---lg~~~-~~~~~~~-~~~~~~~i~~~~~~~~~  253 (364)
                      .+.+|||+|+ |.+|.+.++.+...|+ .|++++++.++.+. .++   .+... .+..+-. .+++.+.++.+....++
T Consensus        13 ~~k~vlITGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   91 (266)
T 1xq1_A           13 KAKTVLVTGGTKGIGHAIVEEFAGFGA-VIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMFGG   91 (266)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHTT
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHHhCC
Confidence            4678999998 9999999999988999 57777777665433 222   24321 2222222 22333333333333335


Q ss_pred             CccEEEECCCC
Q 017916          254 GIDVSFDCAGF  264 (364)
Q Consensus       254 ~~d~vid~~g~  264 (364)
                      ++|++|+++|.
T Consensus        92 ~id~li~~Ag~  102 (266)
T 1xq1_A           92 KLDILINNLGA  102 (266)
T ss_dssp             CCSEEEEECCC
T ss_pred             CCcEEEECCCC
Confidence            79999998874

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*

Probab=96.27  E-value=0.037  Score=47.69  Aligned_cols=81  Identities=30%  Similarity=0.392  Sum_probs=51.5

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHH-HHc----CCCe-EEecCC-CcccHHHHHHHHHHHcC
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KEL----GADN-IVKVST-NLQDIAEEVEKIQKAMG  252 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~-~~l----g~~~-~~~~~~-~~~~~~~~i~~~~~~~~  252 (364)
                      .+.++||+|+ |.+|.+.++.+...|+ .|+.++++.++.+.+ +++    +... .+..|- ..+++.+.++.+.+.. 
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-   83 (263)
T 3ai3_A            6 SGKVAVITGSSSGIGLAIAEGFAKEGA-HIVLVARQVDRLHEAARSLKEKFGVRVLEVAVDVATPEGVDAVVESVRSSF-   83 (263)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSHHHHHHHHHHHHHHH-
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHc-
Confidence            4678999998 9999999999999999 577777777654432 222    4322 222222 2233344444433322 


Q ss_pred             CCccEEEECCC
Q 017916          253 TGIDVSFDCAG  263 (364)
Q Consensus       253 ~~~d~vid~~g  263 (364)
                      +++|++|+++|
T Consensus        84 g~id~lv~~Ag   94 (263)
T 3ai3_A           84 GGADILVNNAG   94 (263)
T ss_dssp             SSCSEEEECCC
T ss_pred             CCCCEEEECCC
Confidence            47999999987

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A

Probab=96.27  E-value=0.019  Score=49.72  Aligned_cols=82  Identities=26%  Similarity=0.348  Sum_probs=53.9

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHH-HHHcCCCe-EEecCCC-cccHHHHHHHHHHHcCCCcc
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSV-AKELGADN-IVKVSTN-LQDIAEEVEKIQKAMGTGID  256 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~-~~~lg~~~-~~~~~~~-~~~~~~~i~~~~~~~~~~~d  256 (364)
                      .|.++||+|+ +++|.+.++.+...|+ .|+.++++.++.+. .++++... .+..+-. .+++.+.++.+.+. .+++|
T Consensus        26 ~gk~vlVTGas~gIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~-~g~iD  103 (266)
T 3grp_A           26 TGRKALVTGATGGIGEAIARCFHAQGA-IVGLHGTREDKLKEIAADLGKDVFVFSANLSDRKSIKQLAEVAERE-MEGID  103 (266)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCSSEEEEECCTTSHHHHHHHHHHHHHH-HTSCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCceEEEEeecCCHHHHHHHHHHHHHH-cCCCC
Confidence            5789999998 9999999999999999 56777777766543 45566442 2222222 23333333333332 24799


Q ss_pred             EEEECCCC
Q 017916          257 VSFDCAGF  264 (364)
Q Consensus       257 ~vid~~g~  264 (364)
                      ++|+++|.
T Consensus       104 ~lvnnAg~  111 (266)
T 3grp_A          104 ILVNNAGI  111 (266)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCC
Confidence            99999884

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*

Probab=96.27  E-value=0.036  Score=47.93  Aligned_cols=82  Identities=18%  Similarity=0.205  Sum_probs=51.8

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHH-HH----cCCC--eEEecCC-CcccHHHHHHHHHHHc
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KE----LGAD--NIVKVST-NLQDIAEEVEKIQKAM  251 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~-~~----lg~~--~~~~~~~-~~~~~~~~i~~~~~~~  251 (364)
                      .+.++||+|+ +++|.+.++.+...|+ .|+.++++.++.+.+ ++    .+..  ..+..|- ..++..+.++.+.+..
T Consensus         7 ~~k~~lVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   85 (265)
T 3lf2_A            7 SEAVAVVTGGSSGIGLATVELLLEAGA-AVAFCARDGERLRAAESALRQRFPGARLFASVCDVLDALQVRAFAEACERTL   85 (265)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCCHHHHHHHHHHHHHHc
Confidence            4689999998 9999999999999999 577777777664432 22    2322  2222222 2233333344433322


Q ss_pred             CCCccEEEECCCC
Q 017916          252 GTGIDVSFDCAGF  264 (364)
Q Consensus       252 ~~~~d~vid~~g~  264 (364)
                       +++|++|+++|.
T Consensus        86 -g~id~lvnnAg~   97 (265)
T 3lf2_A           86 -GCASILVNNAGQ   97 (265)
T ss_dssp             -CSCSEEEECCCC
T ss_pred             -CCCCEEEECCCC
Confidence             479999999873

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=96.26  E-value=0.012  Score=50.10  Aligned_cols=81  Identities=19%  Similarity=0.276  Sum_probs=52.0

Q ss_pred             CCEEEEEcC-CHHHHHHHHHHHHCC--CCEEEEEecChhHHHHHHHc-CCC-eEEecCCC-cccHHHHHHHHHHHcC-CC
Q 017916          182 ETNVLIMGA-GPIGLVTMLGARAFG--APRIVIVDVDDYRLSVAKEL-GAD-NIVKVSTN-LQDIAEEVEKIQKAMG-TG  254 (364)
Q Consensus       182 g~~VLI~Ga-g~~G~~ai~la~~~g--~~~vv~~~~~~~~~~~~~~l-g~~-~~~~~~~~-~~~~~~~i~~~~~~~~-~~  254 (364)
                      +.+|||+|+ |.+|.+.++.+...|  + .|++++++.++.+.++++ +.. ..+..+-. .+++.+.++.+.+..+ .+
T Consensus         3 ~k~vlItGasggiG~~la~~l~~~g~~~-~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~~   81 (250)
T 1yo6_A            3 PGSVVVTGANRGIGLGLVQQLVKDKNIR-HIIATARDVEKATELKSIKDSRVHVLPLTVTCDKSLDTFVSKVGEIVGSDG   81 (250)
T ss_dssp             CSEEEESSCSSHHHHHHHHHHHTCTTCC-EEEEEESSGGGCHHHHTCCCTTEEEEECCTTCHHHHHHHHHHHHHHHGGGC
T ss_pred             CCEEEEecCCchHHHHHHHHHHhcCCCc-EEEEEecCHHHHHHHHhccCCceEEEEeecCCHHHHHHHHHHHHHhcCCCC
Confidence            568999998 999999999998899  7 677787877766655554 222 22222222 2233333443333222 27


Q ss_pred             ccEEEECCC
Q 017916          255 IDVSFDCAG  263 (364)
Q Consensus       255 ~d~vid~~g  263 (364)
                      +|++|+++|
T Consensus        82 id~li~~Ag   90 (250)
T 1yo6_A           82 LSLLINNAG   90 (250)
T ss_dssp             CCEEEECCC
T ss_pred             CcEEEECCc
Confidence            999999886

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2

Probab=96.26  E-value=0.023  Score=49.29  Aligned_cols=81  Identities=22%  Similarity=0.268  Sum_probs=52.5

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHH-HHcCCCeEEecCCC-cccHHHHHHHHHHHcCCCccE
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KELGADNIVKVSTN-LQDIAEEVEKIQKAMGTGIDV  257 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~-~~lg~~~~~~~~~~-~~~~~~~i~~~~~~~~~~~d~  257 (364)
                      .+.++||+|+ |.+|.+.++.+...|+ .|++++++.++.+.+ +++.....+..|-. .+++.+.++...+.. +++|+
T Consensus         8 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~-g~iD~   85 (270)
T 1yde_A            8 AGKVVVVTGGGRGIGAGIVRAFVNSGA-RVVICDKDESGGRALEQELPGAVFILCDVTQEDDVKTLVSETIRRF-GRLDC   85 (270)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHH-SCCCE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhcCCeEEEcCCCCHHHHHHHHHHHHHHc-CCCCE
Confidence            4689999998 9999999999999999 577777777665543 34432222322222 233333344333322 47999


Q ss_pred             EEECCC
Q 017916          258 SFDCAG  263 (364)
Q Consensus       258 vid~~g  263 (364)
                      +|+++|
T Consensus        86 lv~nAg   91 (270)
T 1yde_A           86 VVNNAG   91 (270)
T ss_dssp             EEECCC
T ss_pred             EEECCC
Confidence            999887

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*

Probab=96.26  E-value=0.036  Score=47.38  Aligned_cols=82  Identities=21%  Similarity=0.236  Sum_probs=51.7

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecCh-hHHH-HHHHcCCCe-EEecCCC-cccHHHHHHHHHHHcCCCc
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDD-YRLS-VAKELGADN-IVKVSTN-LQDIAEEVEKIQKAMGTGI  255 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~-~~~~-~~~~lg~~~-~~~~~~~-~~~~~~~i~~~~~~~~~~~  255 (364)
                      .+.++||+|+ |.+|.+.++.+...|+ .|+.++++. ++.+ .+++.+... .+..|-. .+++.+.++.+.+.. +++
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-g~i   83 (249)
T 2ew8_A            6 KDKLAVITGGANGIGRAIAERFAVEGA-DIAIADLVPAPEAEAAIRNLGRRVLTVKCDVSQPGDVEAFGKQVISTF-GRC   83 (249)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCCHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH-SCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEcCCchhHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHc-CCC
Confidence            4678999998 9999999999999999 566666665 4443 344555332 2222222 233333333333322 479


Q ss_pred             cEEEECCCC
Q 017916          256 DVSFDCAGF  264 (364)
Q Consensus       256 d~vid~~g~  264 (364)
                      |++|+++|.
T Consensus        84 d~lv~nAg~   92 (249)
T 2ew8_A           84 DILVNNAGI   92 (249)
T ss_dssp             CEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999999873

>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7

Probab=96.26  E-value=0.0088  Score=50.45  Aligned_cols=98  Identities=18%  Similarity=0.213  Sum_probs=66.2

Q ss_pred             CCCCCCEEEEEcCCHHHHHHHHHHHHCCC------CEEEEEecChhHHHHHHHc----C-----CCeEEecCCCcccHHH
Q 017916          178 NIGPETNVLIMGAGPIGLVTMLGARAFGA------PRIVIVDVDDYRLSVAKEL----G-----ADNIVKVSTNLQDIAE  242 (364)
Q Consensus       178 ~~~~g~~VLI~Gag~~G~~ai~la~~~g~------~~vv~~~~~~~~~~~~~~l----g-----~~~~~~~~~~~~~~~~  242 (364)
                      .++++++||-.|+|. |..+..+++..+.      ..+++++.+++..+.+++.    +     ...+.....   +..+
T Consensus        81 ~~~~~~~VLdiG~G~-G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~---d~~~  156 (227)
T 1r18_A           81 HLKPGARILDVGSGS-GYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEG---DGRK  156 (227)
T ss_dssp             TCCTTCEEEEESCTT-SHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEES---CGGG
T ss_pred             hCCCCCEEEEECCCc-cHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCCceEEEEC---Cccc
Confidence            578999999999865 7888888887663      3799999998877766542    2     111111111   1111


Q ss_pred             HHHHHHHHcCCCccEEEECCCCHHHHHHHHHhcccCCEEEEE
Q 017916          243 EVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLV  284 (364)
Q Consensus       243 ~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~  284 (364)
                      .   +.  ....+|+|+...........+.+.|+++|+++..
T Consensus       157 ~---~~--~~~~fD~I~~~~~~~~~~~~~~~~LkpgG~lvi~  193 (227)
T 1r18_A          157 G---YP--PNAPYNAIHVGAAAPDTPTELINQLASGGRLIVP  193 (227)
T ss_dssp             C---CG--GGCSEEEEEECSCBSSCCHHHHHTEEEEEEEEEE
T ss_pred             C---CC--cCCCccEEEECCchHHHHHHHHHHhcCCCEEEEE
Confidence            0   10  1257999998776556667899999999998875

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2

Probab=96.26  E-value=0.029  Score=48.52  Aligned_cols=81  Identities=21%  Similarity=0.227  Sum_probs=52.3

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHH-HHcCCC-eEEecCC-CcccHHHHHHHHHHHcCCCcc
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KELGAD-NIVKVST-NLQDIAEEVEKIQKAMGTGID  256 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~-~~lg~~-~~~~~~~-~~~~~~~~i~~~~~~~~~~~d  256 (364)
                      .+.++||+|+ |.+|.+.++.+...|+ .|+.++++.++.+.+ ++++.. ..+..|- ..+++.+.++...... +++|
T Consensus         5 ~~k~vlITGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~-g~iD   82 (263)
T 2a4k_A            5 SGKTILVTGAASGIGRAALDLFAREGA-SLVAVDREERLLAEAVAALEAEAIAVVADVSDPKAVEAVFAEALEEF-GRLH   82 (263)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTCCSSEEEEECCTTSHHHHHHHHHHHHHHH-SCCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhcCceEEEEcCCCCHHHHHHHHHHHHHHc-CCCc
Confidence            4678999998 9999999999999999 577777777665543 445422 1222222 2233333344433322 4799


Q ss_pred             EEEECCC
Q 017916          257 VSFDCAG  263 (364)
Q Consensus       257 ~vid~~g  263 (364)
                      ++|+++|
T Consensus        83 ~lvnnAg   89 (263)
T 2a4k_A           83 GVAHFAG   89 (263)
T ss_dssp             EEEEGGG
T ss_pred             EEEECCC
Confidence            9999887

>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}

Probab=96.25  E-value=0.014  Score=47.90  Aligned_cols=102  Identities=19%  Similarity=0.256  Sum_probs=67.6

Q ss_pred             HcCCCCCCEEEEEcCCHHHHHHHHHHHHCC-CCEEEEEecChhHHHHHHH----cCC-CeEEecCCCcccHHHHHHHHHH
Q 017916          176 RANIGPETNVLIMGAGPIGLVTMLGARAFG-APRIVIVDVDDYRLSVAKE----LGA-DNIVKVSTNLQDIAEEVEKIQK  249 (364)
Q Consensus       176 ~~~~~~g~~VLI~Gag~~G~~ai~la~~~g-~~~vv~~~~~~~~~~~~~~----lg~-~~~~~~~~~~~~~~~~i~~~~~  249 (364)
                      ...++++++||-.|+|. |..+..+++..+ ...+++++.+++..+.+++    .+. ..+......-.++.       .
T Consensus        17 ~~~~~~~~~vLDlGcG~-G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-------~   88 (197)
T 3eey_A           17 KMFVKEGDTVVDATCGN-GNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLNLIDRVTLIKDGHQNMD-------K   88 (197)
T ss_dssp             HHHCCTTCEEEESCCTT-SHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTTCGGGEEEECSCGGGGG-------G
T ss_pred             HhcCCCCCEEEEcCCCC-CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHh-------h
Confidence            34568899999998765 778888888864 3389999999988777654    343 22211111111111       1


Q ss_pred             HcCCCccEEEECCCC---------------HHHHHHHHHhcccCCEEEEEc
Q 017916          250 AMGTGIDVSFDCAGF---------------NKTMSTALSATRAGGKVCLVG  285 (364)
Q Consensus       250 ~~~~~~d~vid~~g~---------------~~~~~~~~~~l~~~G~~v~~g  285 (364)
                      .....+|+|+...+-               ...+..+.+.|+++|+++...
T Consensus        89 ~~~~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~l~~~~  139 (197)
T 3eey_A           89 YIDCPVKAVMFNLGYLPSGDHSISTRPETTIQALSKAMELLVTGGIITVVI  139 (197)
T ss_dssp             TCCSCEEEEEEEESBCTTSCTTCBCCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             hccCCceEEEEcCCcccCcccccccCcccHHHHHHHHHHhCcCCCEEEEEE
Confidence            124679999865421               257888999999999998764

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=96.25  E-value=0.019  Score=50.15  Aligned_cols=81  Identities=25%  Similarity=0.301  Sum_probs=51.2

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHH-HHc---CC---C-eEEecCC-CcccHHHHHHHHHHH
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KEL---GA---D-NIVKVST-NLQDIAEEVEKIQKA  250 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~-~~l---g~---~-~~~~~~~-~~~~~~~~i~~~~~~  250 (364)
                      .+.++||+|+ |.+|.+.++.+...|+ .|+.++++.++.+.+ +++   +.   . ..+..|- ..+++.+.++.+.+.
T Consensus         5 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   83 (280)
T 1xkq_A            5 SNKTVIITGSSNGIGRTTAILFAQEGA-NVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLKQ   83 (280)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHcCCCCcceEEEEecCCCHHHHHHHHHHHHHh
Confidence            4678999998 9999999999988999 577777777665433 222   22   1 1222222 223333344443333


Q ss_pred             cCCCccEEEECCC
Q 017916          251 MGTGIDVSFDCAG  263 (364)
Q Consensus       251 ~~~~~d~vid~~g  263 (364)
                      . +++|++|+++|
T Consensus        84 ~-g~iD~lv~nAg   95 (280)
T 1xkq_A           84 F-GKIDVLVNNAG   95 (280)
T ss_dssp             H-SCCCEEEECCC
T ss_pred             c-CCCCEEEECCC
Confidence            2 47999999887

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}

Probab=96.24  E-value=0.026  Score=49.26  Aligned_cols=82  Identities=23%  Similarity=0.331  Sum_probs=53.9

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHH-HHHcCCC-eEEecCCC-cccHHHHHHHHHHHcCCCcc
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSV-AKELGAD-NIVKVSTN-LQDIAEEVEKIQKAMGTGID  256 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~-~~~lg~~-~~~~~~~~-~~~~~~~i~~~~~~~~~~~d  256 (364)
                      .|.++||+|+ +++|.+.++.+...|+ .|+.++++.++.+. .++++.. ..+..|-. .+++.+.++.+.+.. +++|
T Consensus        28 ~gk~vlVTGas~gIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~-g~iD  105 (277)
T 3gvc_A           28 AGKVAIVTGAGAGIGLAVARRLADEGC-HVLCADIDGDAADAAATKIGCGAAACRVDVSDEQQIIAMVDACVAAF-GGVD  105 (277)
T ss_dssp             TTCEEEETTTTSTHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHCSSCEEEECCTTCHHHHHHHHHHHHHHH-SSCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHcCCcceEEEecCCCHHHHHHHHHHHHHHc-CCCC
Confidence            4689999997 9999999999989999 67777777766544 4456533 22222222 233333444443332 4799


Q ss_pred             EEEECCCC
Q 017916          257 VSFDCAGF  264 (364)
Q Consensus       257 ~vid~~g~  264 (364)
                      ++|+++|.
T Consensus       106 ~lvnnAg~  113 (277)
T 3gvc_A          106 KLVANAGV  113 (277)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCC
Confidence            99999884

>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*

Probab=96.24  E-value=0.037  Score=49.93  Aligned_cols=54  Identities=26%  Similarity=0.335  Sum_probs=42.9

Q ss_pred             HHHcCC--CCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCC
Q 017916          174 CRRANI--GPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGAD  228 (364)
Q Consensus       174 l~~~~~--~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~  228 (364)
                      ++....  -+|.+|.|.|.|.+|+.+++.++.+|+ +|++.+.+..+.++.++++++
T Consensus       165 ~~~~G~~~L~GktV~I~G~GnVG~~~A~~l~~~Ga-kVvvsD~~~~~~~~a~~~ga~  220 (355)
T 1c1d_A          165 VAHRGLGSLDGLTVLVQGLGAVGGSLASLAAEAGA-QLLVADTDTERVAHAVALGHT  220 (355)
T ss_dssp             HHHTTCCCSTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCE
T ss_pred             HHhcCCCCCCCCEEEEECcCHHHHHHHHHHHHCCC-EEEEEeCCccHHHHHHhcCCE
Confidence            444443  578999999999999999999999999 566888777666667777764

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2

Probab=96.23  E-value=0.048  Score=47.27  Aligned_cols=82  Identities=24%  Similarity=0.334  Sum_probs=51.9

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHH-H---HcCCC-eEEecCCC-cccHHHHHHHHHHHcCC
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-K---ELGAD-NIVKVSTN-LQDIAEEVEKIQKAMGT  253 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~-~---~lg~~-~~~~~~~~-~~~~~~~i~~~~~~~~~  253 (364)
                      .+.+|||+|+ |.+|.+.+..+...|+ .|++++++.++.+.+ +   ..+.. ..+..|-. .+++.+.++.+.+. -+
T Consensus        30 ~~k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~-~g  107 (272)
T 1yb1_A           30 TGEIVLITGAGHGIGRLTAYEFAKLKS-KLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAE-IG  107 (272)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH-TC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEEcCHHHHHHHHHHHHhcCCeEEEEEeeCCCHHHHHHHHHHHHHH-CC
Confidence            4679999998 9999999999999999 577777777654432 2   23432 22222222 23333334433332 34


Q ss_pred             CccEEEECCCC
Q 017916          254 GIDVSFDCAGF  264 (364)
Q Consensus       254 ~~d~vid~~g~  264 (364)
                      ++|++|+++|.
T Consensus       108 ~iD~li~~Ag~  118 (272)
T 1yb1_A          108 DVSILVNNAGV  118 (272)
T ss_dssp             CCSEEEECCCC
T ss_pred             CCcEEEECCCc
Confidence            79999999873

>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9

Probab=96.23  E-value=0.12  Score=39.40  Aligned_cols=77  Identities=22%  Similarity=0.284  Sum_probs=51.0

Q ss_pred             CCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHH-HcCCCeEEecCCCcccHHHHHHHHHHHcCCCccEEEE
Q 017916          182 ETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAK-ELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  260 (364)
Q Consensus       182 g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~-~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid  260 (364)
                      +.+|+|.|+|.+|...++.+...|. .|++++.++++.+.++ .++... +.-+..  +. +.+.   ...-.++|++|.
T Consensus         4 ~m~i~IiG~G~iG~~~a~~L~~~g~-~v~~~d~~~~~~~~~~~~~~~~~-~~~d~~--~~-~~l~---~~~~~~~d~vi~   75 (140)
T 1lss_A            4 GMYIIIAGIGRVGYTLAKSLSEKGH-DIVLIDIDKDICKKASAEIDALV-INGDCT--KI-KTLE---DAGIEDADMYIA   75 (140)
T ss_dssp             -CEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHCSSEE-EESCTT--SH-HHHH---HTTTTTCSEEEE
T ss_pred             CCEEEEECCCHHHHHHHHHHHhCCC-eEEEEECCHHHHHHHHHhcCcEE-EEcCCC--CH-HHHH---HcCcccCCEEEE
Confidence            4689999999999999999988898 6788888887776655 356532 221111  11 1121   112357999999


Q ss_pred             CCCCHH
Q 017916          261 CAGFNK  266 (364)
Q Consensus       261 ~~g~~~  266 (364)
                      ++++..
T Consensus        76 ~~~~~~   81 (140)
T 1lss_A           76 VTGKEE   81 (140)
T ss_dssp             CCSCHH
T ss_pred             eeCCch
Confidence            998653

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*

Probab=96.22  E-value=0.052  Score=45.28  Aligned_cols=95  Identities=18%  Similarity=0.118  Sum_probs=59.1

Q ss_pred             CEEEEEcC-CHHHHHHHHHHH-HCCCCEEEEEecChh-HHHHHHHcCCC-eEEecCCCcccHHHHHHHHHHHcCCCccEE
Q 017916          183 TNVLIMGA-GPIGLVTMLGAR-AFGAPRIVIVDVDDY-RLSVAKELGAD-NIVKVSTNLQDIAEEVEKIQKAMGTGIDVS  258 (364)
Q Consensus       183 ~~VLI~Ga-g~~G~~ai~la~-~~g~~~vv~~~~~~~-~~~~~~~lg~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~d~v  258 (364)
                      .+|||+|+ |.+|.+.++.+. ..|+ .|++++++++ +.+.+...+.. ..+..+-.  + .+.+++..    .++|++
T Consensus         6 k~vlVtGasg~iG~~~~~~l~~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~--d-~~~~~~~~----~~~d~v   77 (221)
T 3r6d_A            6 XYITILGAAGQIAQXLTATLLTYTDM-HITLYGRQLKTRIPPEIIDHERVTVIEGSFQ--N-PGXLEQAV----TNAEVV   77 (221)
T ss_dssp             SEEEEESTTSHHHHHHHHHHHHHCCC-EEEEEESSHHHHSCHHHHTSTTEEEEECCTT--C-HHHHHHHH----TTCSEE
T ss_pred             EEEEEEeCCcHHHHHHHHHHHhcCCc-eEEEEecCccccchhhccCCCceEEEECCCC--C-HHHHHHHH----cCCCEE
Confidence            36999998 999999998887 8999 6777777776 55444222222 22222221  2 22344333    378999


Q ss_pred             EECCCCHHH-HHHHHHhcccC--CEEEEEc
Q 017916          259 FDCAGFNKT-MSTALSATRAG--GKVCLVG  285 (364)
Q Consensus       259 id~~g~~~~-~~~~~~~l~~~--G~~v~~g  285 (364)
                      |+++|.... ...+++.++..  ++++.++
T Consensus        78 v~~ag~~n~~~~~~~~~~~~~~~~~iv~iS  107 (221)
T 3r6d_A           78 FVGAMESGSDMASIVKALSRXNIRRVIGVS  107 (221)
T ss_dssp             EESCCCCHHHHHHHHHHHHHTTCCEEEEEE
T ss_pred             EEcCCCCChhHHHHHHHHHhcCCCeEEEEe
Confidence            999985211 44556666543  5888776

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*

Probab=96.21  E-value=0.033  Score=47.96  Aligned_cols=81  Identities=23%  Similarity=0.358  Sum_probs=52.0

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHH-HHHHcCCCe-EEecCCC-cccHHHHHHHHHHHcCCCcc
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLS-VAKELGADN-IVKVSTN-LQDIAEEVEKIQKAMGTGID  256 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~-~~~~lg~~~-~~~~~~~-~~~~~~~i~~~~~~~~~~~d  256 (364)
                      .+.++||+|+ |.+|.+.++.+...|+ .|++++++.++.+ ..++++... .+..+-. .+++.+.++.+.... +++|
T Consensus        11 ~~k~vlVTGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~-g~id   88 (265)
T 2o23_A           11 KGLVAVITGGASGLGLATAERLVGQGA-SAVLLDLPNSGGEAQAKKLGNNCVFAPADVTSEKDVQTALALAKGKF-GRVD   88 (265)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECTTSSHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHH-SCCC
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCcHhHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHC-CCCC
Confidence            4679999998 9999999999999999 5666666665543 445555432 2222222 233334444433322 4799


Q ss_pred             EEEECCC
Q 017916          257 VSFDCAG  263 (364)
Q Consensus       257 ~vid~~g  263 (364)
                      ++|+++|
T Consensus        89 ~li~~Ag   95 (265)
T 2o23_A           89 VAVNCAG   95 (265)
T ss_dssp             EEEECCC
T ss_pred             EEEECCc
Confidence            9999887

>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}

Probab=96.21  E-value=0.042  Score=47.68  Aligned_cols=82  Identities=24%  Similarity=0.422  Sum_probs=52.3

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHH-H---HcCCCe-EEecCC-CcccHHHHHHHHHHHcCC
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-K---ELGADN-IVKVST-NLQDIAEEVEKIQKAMGT  253 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~-~---~lg~~~-~~~~~~-~~~~~~~~i~~~~~~~~~  253 (364)
                      .|.++||+|+ +++|.+.++.+...|+ .|+.++++.++.+.+ +   ..+... .+..|- ..+++.+.++.+... .+
T Consensus        25 ~gk~~lVTGas~gIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~-~g  102 (271)
T 4ibo_A           25 GGRTALVTGSSRGLGRAMAEGLAVAGA-RILINGTDPSRVAQTVQEFRNVGHDAEAVAFDVTSESEIIEAFARLDEQ-GI  102 (271)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHH-TC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHH-CC
Confidence            5789999998 9999999999999999 677777777654432 2   234332 111221 223333344443332 35


Q ss_pred             CccEEEECCCC
Q 017916          254 GIDVSFDCAGF  264 (364)
Q Consensus       254 ~~d~vid~~g~  264 (364)
                      ++|++|+++|.
T Consensus       103 ~iD~lv~nAg~  113 (271)
T 4ibo_A          103 DVDILVNNAGI  113 (271)
T ss_dssp             CCCEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            79999999883

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}

Probab=96.21  E-value=0.035  Score=48.68  Aligned_cols=79  Identities=24%  Similarity=0.380  Sum_probs=53.1

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHH-HHcCCCe-EEecCCCcccHHHHHHHHHHHcCCCccE
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KELGADN-IVKVSTNLQDIAEEVEKIQKAMGTGIDV  257 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~-~~lg~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~d~  257 (364)
                      .|.++||+|+ |.+|.+.++.+...|+ .|+.++++.++.+.+ ++++... .+..+-  .+ .+.++++.+.. +++|+
T Consensus        15 ~gk~vlVTGas~gIG~~~a~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl--~d-~~~v~~~~~~~-~~iD~   89 (291)
T 3rd5_A           15 AQRTVVITGANSGLGAVTARELARRGA-TVIMAVRDTRKGEAAARTMAGQVEVRELDL--QD-LSSVRRFADGV-SGADV   89 (291)
T ss_dssp             TTCEEEEECCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHTTSSSEEEEEECCT--TC-HHHHHHHHHTC-CCEEE
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhcCCeeEEEcCC--CC-HHHHHHHHHhc-CCCCE
Confidence            5789999998 9999999999999999 577777887776544 3454321 222222  12 23355554433 47999


Q ss_pred             EEECCCC
Q 017916          258 SFDCAGF  264 (364)
Q Consensus       258 vid~~g~  264 (364)
                      +|+++|.
T Consensus        90 lv~nAg~   96 (291)
T 3rd5_A           90 LINNAGI   96 (291)
T ss_dssp             EEECCCC
T ss_pred             EEECCcC
Confidence            9999883

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*

Probab=96.20  E-value=0.032  Score=48.40  Aligned_cols=81  Identities=25%  Similarity=0.388  Sum_probs=51.0

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHH-HHHHcCC--C-eEEecCCC-cccHHHHHHHHHHHcCCC
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLS-VAKELGA--D-NIVKVSTN-LQDIAEEVEKIQKAMGTG  254 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~-~~~~lg~--~-~~~~~~~~-~~~~~~~i~~~~~~~~~~  254 (364)
                      .+.++||+|+ |.+|.+.++.+...|+ .|++++++.++.+ ..++++.  . ..+..|-. .+++.+.++.+.... ++
T Consensus        15 ~~k~vlITGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~   92 (278)
T 2bgk_A           15 QDKVAIITGGAGGIGETTAKLFVRYGA-KVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAKH-GK   92 (278)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHH-SC
T ss_pred             cCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEcCChhHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHHHc-CC
Confidence            4678999998 9999999999988999 5777777766543 3344432  1 22222221 233333333333222 47


Q ss_pred             ccEEEECCC
Q 017916          255 IDVSFDCAG  263 (364)
Q Consensus       255 ~d~vid~~g  263 (364)
                      +|++|+++|
T Consensus        93 id~li~~Ag  101 (278)
T 2bgk_A           93 LDIMFGNVG  101 (278)
T ss_dssp             CCEEEECCC
T ss_pred             CCEEEECCc
Confidence            999999887

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2

Probab=96.20  E-value=0.051  Score=46.62  Aligned_cols=80  Identities=29%  Similarity=0.349  Sum_probs=50.7

Q ss_pred             CCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHH-HH---cCCC-eEEecCC-CcccHHHHHHHHHHHcCCC
Q 017916          182 ETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KE---LGAD-NIVKVST-NLQDIAEEVEKIQKAMGTG  254 (364)
Q Consensus       182 g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~-~~---lg~~-~~~~~~~-~~~~~~~~i~~~~~~~~~~  254 (364)
                      +.++||+|+ |.+|.+.++.+...|+ .|+.++++.++.+.+ ++   .+.. ..+..|- ..+++.+.++...+. -++
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~-~g~   79 (256)
T 1geg_A            2 KKVALVTGAGQGIGKAIALRLVKDGF-AVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKT-LGG   79 (256)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHH-TTC
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHH-hCC
Confidence            468999998 9999999999999999 577777777654432 22   2432 1222222 223344444444332 347


Q ss_pred             ccEEEECCC
Q 017916          255 IDVSFDCAG  263 (364)
Q Consensus       255 ~d~vid~~g  263 (364)
                      +|++|+++|
T Consensus        80 id~lv~nAg   88 (256)
T 1geg_A           80 FDVIVNNAG   88 (256)
T ss_dssp             CCEEEECCC
T ss_pred             CCEEEECCC
Confidence            999999987

>3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1}

Probab=96.20  E-value=0.047  Score=49.19  Aligned_cols=132  Identities=16%  Similarity=0.179  Sum_probs=81.5

Q ss_pred             CEEEEEcCCHHHHHHHHHHH-H-CCCCEEEEEecChhHHH-HHHHcCCCeEEecCCCcccHHHHHHHHHHHcCCCccEEE
Q 017916          183 TNVLIMGAGPIGLVTMLGAR-A-FGAPRIVIVDVDDYRLS-VAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF  259 (364)
Q Consensus       183 ~~VLI~Gag~~G~~ai~la~-~-~g~~~vv~~~~~~~~~~-~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vi  259 (364)
                      -+|.|.|+|.+|...++.++ . -+++.+.+.+.++++.+ +.+++|...+..      ++    +++..  ..++|+|+
T Consensus         9 ~~v~iiG~G~ig~~~~~~l~~~~~~~~~vav~d~~~~~~~~~a~~~g~~~~~~------~~----~~~l~--~~~~D~V~   76 (346)
T 3cea_A            9 LRAAIIGLGRLGERHARHLVNKIQGVKLVAACALDSNQLEWAKNELGVETTYT------NY----KDMID--TENIDAIF   76 (346)
T ss_dssp             EEEEEECCSTTHHHHHHHHHHTCSSEEEEEEECSCHHHHHHHHHTTCCSEEES------CH----HHHHT--TSCCSEEE
T ss_pred             ceEEEEcCCHHHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHhCCCcccC------CH----HHHhc--CCCCCEEE
Confidence            47899999999988877776 4 46655566777777765 445677754331      22    22321  24799999


Q ss_pred             ECCCCHHHHHHHHHhcccCCEEEEEcCCCCCcccc---chhh-hhc-CcEEEeecc--CCCcHHHHHHHHHcCCC
Q 017916          260 DCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVP---LTPA-AVR-EVDVVGVFR--YKNTWPLCLELLRSGKI  327 (364)
Q Consensus       260 d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~---~~~~-~~~-~~~~~~~~~--~~~~~~~~~~~l~~g~~  327 (364)
                      .|+....+...+..+|+.| +.+.+.-+.......   +... -.+ ++.+.-.+.  +...+..+.+++++|.+
T Consensus        77 i~tp~~~h~~~~~~al~~G-~~v~~eKp~~~~~~~~~~l~~~a~~~~~~~~~~~~~~r~~p~~~~~~~~i~~g~i  150 (346)
T 3cea_A           77 IVAPTPFHPEMTIYAMNAG-LNVFCEKPLGLDFNEVDEMAKVIKSHPNQIFQSGFMRRYDDSYRYAKKIVDNGDI  150 (346)
T ss_dssp             ECSCGGGHHHHHHHHHHTT-CEEEECSCCCSCHHHHHHHHHHHHTCTTSCEECCCGGGTCHHHHHHHHHHHTTTT
T ss_pred             EeCChHhHHHHHHHHHHCC-CEEEEcCCCCCCHHHHHHHHHHHHhCCCCeEEEecccccCHHHHHHHHHHHcCCC
Confidence            9999877888888888865 555554221110101   1111 123 444433222  35568889999999887

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}

Probab=96.19  E-value=0.024  Score=49.43  Aligned_cols=82  Identities=16%  Similarity=0.127  Sum_probs=52.7

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHH-HHHcCCC-eEEecCCC-cccHHHHHHHHHHHcCCCcc
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSV-AKELGAD-NIVKVSTN-LQDIAEEVEKIQKAMGTGID  256 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~-~~~lg~~-~~~~~~~~-~~~~~~~i~~~~~~~~~~~d  256 (364)
                      .+.++||+|+ |.+|.+.++.+...|+ .|++++++.++.+. ..+++.. ..+..+-. .+++.+.++++.... +++|
T Consensus         4 ~~k~vlVTGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~-g~id   81 (281)
T 3m1a_A            4 SAKVWLVTGASSGFGRAIAEAAVAAGD-TVIGTARRTEALDDLVAAYPDRAEAISLDVTDGERIDVVAADVLARY-GRVD   81 (281)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSGGGGHHHHHHCTTTEEEEECCTTCHHHHHHHHHHHHHHH-SCCS
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhccCCceEEEeeCCCHHHHHHHHHHHHHhC-CCCC
Confidence            4678999998 9999999999999999 57777777766544 3445432 22222222 233333344433322 4799


Q ss_pred             EEEECCCC
Q 017916          257 VSFDCAGF  264 (364)
Q Consensus       257 ~vid~~g~  264 (364)
                      ++|+++|.
T Consensus        82 ~lv~~Ag~   89 (281)
T 3m1a_A           82 VLVNNAGR   89 (281)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCc
Confidence            99999873

>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}

Probab=96.19  E-value=0.02  Score=49.10  Aligned_cols=102  Identities=20%  Similarity=0.222  Sum_probs=67.3

Q ss_pred             CCCCCCEEEEEcCCHHHHHHHHHHHHCC-CCEEEEEecChhHHHHHHH----cCCC-eEEecCCCcccHHHHHHHHHHHc
Q 017916          178 NIGPETNVLIMGAGPIGLVTMLGARAFG-APRIVIVDVDDYRLSVAKE----LGAD-NIVKVSTNLQDIAEEVEKIQKAM  251 (364)
Q Consensus       178 ~~~~g~~VLI~Gag~~G~~ai~la~~~g-~~~vv~~~~~~~~~~~~~~----lg~~-~~~~~~~~~~~~~~~i~~~~~~~  251 (364)
                      ...++.+||-.|+|. |..++.+|+.++ ...+++++.+++..+.+++    .|.. .+...   ..+..+.+..+  ..
T Consensus        60 ~~~~~~~VLdiG~G~-G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~---~~d~~~~l~~~--~~  133 (248)
T 3tfw_A           60 RLTQAKRILEIGTLG-GYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAGVDQRVTLR---EGPALQSLESL--GE  133 (248)
T ss_dssp             HHHTCSEEEEECCTT-SHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEE---ESCHHHHHHTC--CS
T ss_pred             hhcCCCEEEEecCCc-hHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEE---EcCHHHHHHhc--CC
Confidence            345778999999765 778889998875 4589999999988777664    3543 12111   12333322211  01


Q ss_pred             CCCccEEEECCCC---HHHHHHHHHhcccCCEEEEEc
Q 017916          252 GTGIDVSFDCAGF---NKTMSTALSATRAGGKVCLVG  285 (364)
Q Consensus       252 ~~~~d~vid~~g~---~~~~~~~~~~l~~~G~~v~~g  285 (364)
                      ...+|+|+-....   ...+..+.+.|+|+|.++.-+
T Consensus       134 ~~~fD~V~~d~~~~~~~~~l~~~~~~LkpGG~lv~~~  170 (248)
T 3tfw_A          134 CPAFDLIFIDADKPNNPHYLRWALRYSRPGTLIIGDN  170 (248)
T ss_dssp             CCCCSEEEECSCGGGHHHHHHHHHHTCCTTCEEEEEC
T ss_pred             CCCeEEEEECCchHHHHHHHHHHHHhcCCCeEEEEeC
Confidence            2379999843222   357788899999999988764

>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}

Probab=96.19  E-value=0.11  Score=43.66  Aligned_cols=106  Identities=11%  Similarity=0.076  Sum_probs=60.5

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecCh-hHH-HHHHHcCCCeEEecCCCcccHHHHHHHHHHHcCCCccEE
Q 017916          181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDD-YRL-SVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVS  258 (364)
Q Consensus       181 ~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~-~~~-~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~v  258 (364)
                      .|.+|||.|+|.+|...++.+...|+. |.+++... ... ++....+.. .+.-.....+            -.++|+|
T Consensus        30 ~gk~VLVVGgG~va~~ka~~Ll~~GA~-VtVvap~~~~~l~~l~~~~~i~-~i~~~~~~~d------------L~~adLV   95 (223)
T 3dfz_A           30 KGRSVLVVGGGTIATRRIKGFLQEGAA-ITVVAPTVSAEINEWEAKGQLR-VKRKKVGEED------------LLNVFFI   95 (223)
T ss_dssp             TTCCEEEECCSHHHHHHHHHHGGGCCC-EEEECSSCCHHHHHHHHTTSCE-EECSCCCGGG------------SSSCSEE
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCCE-EEEECCCCCHHHHHHHHcCCcE-EEECCCCHhH------------hCCCCEE
Confidence            578999999999999999999999995 55554432 222 233332232 2221111111            2479999


Q ss_pred             EECCCCHHHHHHHHHhcccCCEEEEEcCCCCCccccchhhhhc
Q 017916          259 FDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAVR  301 (364)
Q Consensus       259 id~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~  301 (364)
                      |-++++++.-..+... +..|..+.........++.....+.+
T Consensus        96 IaAT~d~~~N~~I~~~-ak~gi~VNvvD~p~~~~f~~Paiv~r  137 (223)
T 3dfz_A           96 VVATNDQAVNKFVKQH-IKNDQLVNMASSFSDGNIQIPAQFSR  137 (223)
T ss_dssp             EECCCCTHHHHHHHHH-SCTTCEEEC-----CCSEECCEEEEE
T ss_pred             EECCCCHHHHHHHHHH-HhCCCEEEEeCCcccCeEEEeeEEEe
Confidence            9999976554444444 44777766544333334444444444

>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*

Probab=96.19  E-value=0.014  Score=50.32  Aligned_cols=123  Identities=19%  Similarity=0.297  Sum_probs=72.6

Q ss_pred             CceEECCCCCCccchhhhhhhHHHHHHHHHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHH--
Q 017916          147 DLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKE--  224 (364)
Q Consensus       147 ~~~~~lP~~~~~~~aa~~~~~~~a~~~l~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~--  224 (364)
                      ...+.++++..+...... ........+... ++++++||-.|+|. |..++.+++ .|+ .+++++.++...+.+++  
T Consensus        88 ~~~~~l~p~~~fgtg~~~-tt~~~~~~l~~~-~~~~~~VLDiGcG~-G~l~~~la~-~g~-~v~gvDi~~~~v~~a~~n~  162 (254)
T 2nxc_A           88 EIPLVIEPGMAFGTGHHE-TTRLALKALARH-LRPGDKVLDLGTGS-GVLAIAAEK-LGG-KALGVDIDPMVLPQAEANA  162 (254)
T ss_dssp             SEEEECCCC-----CCSH-HHHHHHHHHHHH-CCTTCEEEEETCTT-SHHHHHHHH-TTC-EEEEEESCGGGHHHHHHHH
T ss_pred             ceEEEECCCccccCCCCH-HHHHHHHHHHHh-cCCCCEEEEecCCC-cHHHHHHHH-hCC-eEEEEECCHHHHHHHHHHH
Confidence            445666665544433211 111122333333 57899999999765 666776666 577 89999999988776654  


Q ss_pred             --cCCC-eEEecCCCcccHHHHHHHHHHHcCCCccEEEECCCC---HHHHHHHHHhcccCCEEEEEc
Q 017916          225 --LGAD-NIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGF---NKTMSTALSATRAGGKVCLVG  285 (364)
Q Consensus       225 --lg~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid~~g~---~~~~~~~~~~l~~~G~~v~~g  285 (364)
                        .+.. .++.     .++.+.   +   ....+|+|+...-.   ...+..+.+.|+|+|+++..+
T Consensus       163 ~~~~~~v~~~~-----~d~~~~---~---~~~~fD~Vv~n~~~~~~~~~l~~~~~~LkpgG~lils~  218 (254)
T 2nxc_A          163 KRNGVRPRFLE-----GSLEAA---L---PFGPFDLLVANLYAELHAALAPRYREALVPGGRALLTG  218 (254)
T ss_dssp             HHTTCCCEEEE-----SCHHHH---G---GGCCEEEEEEECCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             HHcCCcEEEEE-----CChhhc---C---cCCCCCEEEECCcHHHHHHHHHHHHHHcCCCCEEEEEe
Confidence              3433 1111     233321   1   13579999965421   346677888999999999865

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}

Probab=96.19  E-value=0.023  Score=48.90  Aligned_cols=82  Identities=20%  Similarity=0.233  Sum_probs=47.6

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHH-HHHHcCCC-eEEecCC-CcccHHHHHHHHHHHcCCCcc
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLS-VAKELGAD-NIVKVST-NLQDIAEEVEKIQKAMGTGID  256 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~-~~~~lg~~-~~~~~~~-~~~~~~~~i~~~~~~~~~~~d  256 (364)
                      .+.++||+|+ +++|.+.++.+...|+ .|+.++++.++.+ ..++++.. ..+..|- ..+++.+.++...+.. +++|
T Consensus         6 ~~k~~lVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-g~id   83 (257)
T 3tpc_A            6 KSRVFIVTGASSGLGAAVTRMLAQEGA-TVLGLDLKPPAGEEPAAELGAAVRFRNADVTNEADATAALAFAKQEF-GHVH   83 (257)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESSCC------------CEEEECCTTCHHHHHHHHHHHHHHH-SCCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHc-CCCC
Confidence            4678999998 9999999999999999 5677767665543 33445432 2222222 2233344444443322 4799


Q ss_pred             EEEECCCC
Q 017916          257 VSFDCAGF  264 (364)
Q Consensus       257 ~vid~~g~  264 (364)
                      ++|+++|.
T Consensus        84 ~lv~nAg~   91 (257)
T 3tpc_A           84 GLVNCAGT   91 (257)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCC
Confidence            99999873

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}

Probab=96.19  E-value=0.04  Score=48.07  Aligned_cols=83  Identities=19%  Similarity=0.216  Sum_probs=51.4

Q ss_pred             CCCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHH-HHc---CCCe-EEecCC-CcccHHHHHHHHHHHcC
Q 017916          180 GPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KEL---GADN-IVKVST-NLQDIAEEVEKIQKAMG  252 (364)
Q Consensus       180 ~~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~-~~l---g~~~-~~~~~~-~~~~~~~~i~~~~~~~~  252 (364)
                      ..+.++||+|+ +++|.+.+..+...|+ .|+.++++.++.+.+ +++   +... .+..+- ..+++.+.++.+.+.. 
T Consensus        22 ~~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~-   99 (279)
T 3sju_A           22 SRPQTAFVTGVSSGIGLAVARTLAARGI-AVYGCARDAKNVSAAVDGLRAAGHDVDGSSCDVTSTDEVHAAVAAAVERF-   99 (279)
T ss_dssp             ---CEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc-
Confidence            45789999998 9999999999888999 577777777665432 333   4332 222222 2233334444443333 


Q ss_pred             CCccEEEECCCC
Q 017916          253 TGIDVSFDCAGF  264 (364)
Q Consensus       253 ~~~d~vid~~g~  264 (364)
                      +++|++|+++|.
T Consensus       100 g~id~lv~nAg~  111 (279)
T 3sju_A          100 GPIGILVNSAGR  111 (279)
T ss_dssp             CSCCEEEECCCC
T ss_pred             CCCcEEEECCCC
Confidence            479999999874

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=96.17  E-value=0.021  Score=50.36  Aligned_cols=81  Identities=21%  Similarity=0.296  Sum_probs=51.2

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHH-HH---cCC---C-eEEecCC-CcccHHHHHHHHHHH
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KE---LGA---D-NIVKVST-NLQDIAEEVEKIQKA  250 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~-~~---lg~---~-~~~~~~~-~~~~~~~~i~~~~~~  250 (364)
                      .+.++||+|+ |.+|.+.++.+...|+ .|+.++++.++.+.+ ++   .+.   . ..+..|- ..+++.+.+++..+.
T Consensus        25 ~~k~vlVTGas~gIG~aia~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~  103 (297)
T 1xhl_A           25 SGKSVIITGSSNGIGRSAAVIFAKEGA-QVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLAK  103 (297)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCceEEEEecCCCCHHHHHHHHHHHHHh
Confidence            4688999998 9999999999989999 577777777665432 22   232   1 1222222 223333344443332


Q ss_pred             cCCCccEEEECCC
Q 017916          251 MGTGIDVSFDCAG  263 (364)
Q Consensus       251 ~~~~~d~vid~~g  263 (364)
                      . +++|++|+++|
T Consensus       104 ~-g~iD~lvnnAG  115 (297)
T 1xhl_A          104 F-GKIDILVNNAG  115 (297)
T ss_dssp             H-SCCCEEEECCC
T ss_pred             c-CCCCEEEECCC
Confidence            2 47999999887

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*

Probab=96.17  E-value=0.027  Score=48.50  Aligned_cols=82  Identities=18%  Similarity=0.243  Sum_probs=50.9

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHH-HH---cCCCe-EEecCC-CcccHHHHHHHHHHHcCC
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KE---LGADN-IVKVST-NLQDIAEEVEKIQKAMGT  253 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~-~~---lg~~~-~~~~~~-~~~~~~~~i~~~~~~~~~  253 (364)
                      .+.++||+|+ +++|.+.++.+...|+++++...++.++.+.+ ++   .+... .+..|- ..+++.+.++.+.+.. +
T Consensus         3 ~~k~vlVTGas~gIG~aia~~l~~~G~~vv~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-g   81 (258)
T 3oid_A            3 QNKCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLGVKVLVVKANVGQPAKIKEMFQQIDETF-G   81 (258)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHH-S
T ss_pred             CCCEEEEecCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc-C
Confidence            5788999998 99999999999999995444446666554433 22   34332 222222 2233344444443332 4


Q ss_pred             CccEEEECCC
Q 017916          254 GIDVSFDCAG  263 (364)
Q Consensus       254 ~~d~vid~~g  263 (364)
                      ++|++|+++|
T Consensus        82 ~id~lv~nAg   91 (258)
T 3oid_A           82 RLDVFVNNAA   91 (258)
T ss_dssp             CCCEEEECCC
T ss_pred             CCCEEEECCC
Confidence            7999999987

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...

Probab=96.17  E-value=0.066  Score=46.82  Aligned_cols=81  Identities=19%  Similarity=0.195  Sum_probs=49.1

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecCh-hHHH-HHH----HcCCCe-EEecCCC-----cccHHHHHHHH
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDD-YRLS-VAK----ELGADN-IVKVSTN-----LQDIAEEVEKI  247 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~-~~~~-~~~----~lg~~~-~~~~~~~-----~~~~~~~i~~~  247 (364)
                      .+.++||+|+ +++|.+.++.+...|+ .|+.++++. ++.+ ..+    ..+... .+..+-.     .+++.+.++.+
T Consensus        22 ~~k~~lVTGas~gIG~aia~~L~~~G~-~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~  100 (288)
T 2x9g_A           22 EAPAAVVTGAAKRIGRAIAVKLHQTGY-RVVIHYHNSAEAAVSLADELNKERSNTAVVCQADLTNSNVLPASCEEIINSC  100 (288)
T ss_dssp             CCCEEEETTCSSHHHHHHHHHHHHHTC-EEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSCSTTHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-eEEEEeCCchHHHHHHHHHHHhhcCCceEEEEeecCCccCCHHHHHHHHHHH
Confidence            4678999998 9999999999988999 566666665 4433 222    223221 2222222     22333333333


Q ss_pred             HHHcCCCccEEEECCC
Q 017916          248 QKAMGTGIDVSFDCAG  263 (364)
Q Consensus       248 ~~~~~~~~d~vid~~g  263 (364)
                      .... +++|++|+++|
T Consensus       101 ~~~~-g~iD~lvnnAG  115 (288)
T 2x9g_A          101 FRAF-GRCDVLVNNAS  115 (288)
T ss_dssp             HHHH-SCCCEEEECCC
T ss_pred             HHhc-CCCCEEEECCC
Confidence            3222 47999999887

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}

Probab=96.17  E-value=0.02  Score=50.11  Aligned_cols=81  Identities=22%  Similarity=0.292  Sum_probs=51.5

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHH-HHc---CCCe-EEecCCC-cccHHHHHHHHHHHcCC
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KEL---GADN-IVKVSTN-LQDIAEEVEKIQKAMGT  253 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~-~~l---g~~~-~~~~~~~-~~~~~~~i~~~~~~~~~  253 (364)
                      .|.++||+|+ +++|.+.++.+...|+ .|+.++++.++.+.+ +++   +... .+..+-. .+++.+.++.+.... +
T Consensus         7 ~gk~vlVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-g   84 (280)
T 3tox_A            7 EGKIAIVTGASSGIGRAAALLFAREGA-KVVVTARNGNALAELTDEIAGGGGEAAALAGDVGDEALHEALVELAVRRF-G   84 (280)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTC-EEEECCSCHHHHHHHHHHHTTTTCCEEECCCCTTCHHHHHHHHHHHHHHH-S
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc-C
Confidence            4789999998 9999999999999999 577777777665433 333   3221 1111211 223333333333322 4


Q ss_pred             CccEEEECCC
Q 017916          254 GIDVSFDCAG  263 (364)
Q Consensus       254 ~~d~vid~~g  263 (364)
                      ++|++|+++|
T Consensus        85 ~iD~lvnnAg   94 (280)
T 3tox_A           85 GLDTAFNNAG   94 (280)
T ss_dssp             CCCEEEECCC
T ss_pred             CCCEEEECCC
Confidence            7999999987

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2

Probab=96.17  E-value=0.036  Score=47.43  Aligned_cols=73  Identities=21%  Similarity=0.221  Sum_probs=48.1

Q ss_pred             CCCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcCCCccEE
Q 017916          180 GPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVS  258 (364)
Q Consensus       180 ~~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~v  258 (364)
                      ..+.++||+|+ |.+|.+.++.+...|+ .|+.++++.+.   +++++....+ .+- .++..    .+.+... ++|++
T Consensus        17 ~~~k~vlVTGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~---~~~~~~~~~~-~D~-~~~~~----~~~~~~~-~iD~l   85 (249)
T 1o5i_A           17 IRDKGVLVLAASRGIGRAVADVLSQEGA-EVTICARNEEL---LKRSGHRYVV-CDL-RKDLD----LLFEKVK-EVDIL   85 (249)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHH---HHHTCSEEEE-CCT-TTCHH----HHHHHSC-CCSEE
T ss_pred             cCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEcCCHHH---HHhhCCeEEE-eeH-HHHHH----HHHHHhc-CCCEE
Confidence            46789999998 9999999999988999 57777776533   3445522222 222 22333    3322222 79999


Q ss_pred             EECCC
Q 017916          259 FDCAG  263 (364)
Q Consensus       259 id~~g  263 (364)
                      |+++|
T Consensus        86 v~~Ag   90 (249)
T 1o5i_A           86 VLNAG   90 (249)
T ss_dssp             EECCC
T ss_pred             EECCC
Confidence            99987

>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A

Probab=96.16  E-value=0.027  Score=47.52  Aligned_cols=104  Identities=14%  Similarity=0.158  Sum_probs=68.2

Q ss_pred             HHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCC--CeEEecCCCcccHHHHHHHHHHHcC
Q 017916          175 RRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGA--DNIVKVSTNLQDIAEEVEKIQKAMG  252 (364)
Q Consensus       175 ~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~--~~~~~~~~~~~~~~~~i~~~~~~~~  252 (364)
                      +...++++++||-.|+|. |..+..+++..|...|++++.+++..+.+++.-.  ..+........+...    ... ..
T Consensus        68 ~~~~~~~~~~VLDlGcG~-G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~~----~~~-~~  141 (230)
T 1fbn_A           68 KVMPIKRDSKILYLGASA-GTTPSHVADIADKGIVYAIEYAPRIMRELLDACAERENIIPILGDANKPQE----YAN-IV  141 (230)
T ss_dssp             CCCCCCTTCEEEEESCCS-SHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTTCTTEEEEECCTTCGGG----GTT-TS
T ss_pred             cccCCCCCCEEEEEcccC-CHHHHHHHHHcCCcEEEEEECCHHHHHHHHHHhhcCCCeEEEECCCCCccc----ccc-cC
Confidence            445678899999999866 8888899998875589999999988777654311  222111111111000    000 12


Q ss_pred             CCccEEEECCCCH----HHHHHHHHhcccCCEEEEE
Q 017916          253 TGIDVSFDCAGFN----KTMSTALSATRAGGKVCLV  284 (364)
Q Consensus       253 ~~~d~vid~~g~~----~~~~~~~~~l~~~G~~v~~  284 (364)
                      ..+|+|+.....+    ..+..+.+.|+|+|+++..
T Consensus       142 ~~~D~v~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~  177 (230)
T 1fbn_A          142 EKVDVIYEDVAQPNQAEILIKNAKWFLKKGGYGMIA  177 (230)
T ss_dssp             CCEEEEEECCCSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             ccEEEEEEecCChhHHHHHHHHHHHhCCCCcEEEEE
Confidence            5699999655543    3478899999999999875

>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1

Probab=96.15  E-value=0.034  Score=46.67  Aligned_cols=103  Identities=20%  Similarity=0.233  Sum_probs=68.8

Q ss_pred             CCCCCCEEEEEcCCHHHHHHHHHHHHCC-CCEEEEEecChhHHHHHHH----cCCC-eEEecCCCcccHHHHHHHHHHHc
Q 017916          178 NIGPETNVLIMGAGPIGLVTMLGARAFG-APRIVIVDVDDYRLSVAKE----LGAD-NIVKVSTNLQDIAEEVEKIQKAM  251 (364)
Q Consensus       178 ~~~~g~~VLI~Gag~~G~~ai~la~~~g-~~~vv~~~~~~~~~~~~~~----lg~~-~~~~~~~~~~~~~~~i~~~~~~~  251 (364)
                      ...++.+||-.|+| .|..++.+++.++ ...+++++.+++..+.+++    .|.. .+...   ..+..+.+..+.. .
T Consensus        66 ~~~~~~~vLdiG~G-~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~i~~~---~~d~~~~~~~~~~-~  140 (229)
T 2avd_A           66 RLIQAKKALDLGTF-TGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLR---LKPALETLDELLA-A  140 (229)
T ss_dssp             HHTTCCEEEEECCT-TSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEE---ESCHHHHHHHHHH-T
T ss_pred             HhcCCCEEEEEcCC-ccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCeEEEE---EcCHHHHHHHHHh-c
Confidence            34677899999987 5888889998764 4489999999988777664    3542 22111   1344343333321 1


Q ss_pred             C--CCccEEEECCCC---HHHHHHHHHhcccCCEEEEEc
Q 017916          252 G--TGIDVSFDCAGF---NKTMSTALSATRAGGKVCLVG  285 (364)
Q Consensus       252 ~--~~~d~vid~~g~---~~~~~~~~~~l~~~G~~v~~g  285 (364)
                      +  ..+|+|+.....   ...+..+.+.|+++|.++..+
T Consensus       141 ~~~~~~D~v~~d~~~~~~~~~l~~~~~~L~pgG~lv~~~  179 (229)
T 2avd_A          141 GEAGTFDVAVVDADKENCSAYYERCLQLLRPGGILAVLR  179 (229)
T ss_dssp             TCTTCEEEEEECSCSTTHHHHHHHHHHHEEEEEEEEEEC
T ss_pred             CCCCCccEEEECCCHHHHHHHHHHHHHHcCCCeEEEEEC
Confidence            1  579998854332   357888999999999998864

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=96.15  E-value=0.021  Score=48.79  Aligned_cols=78  Identities=17%  Similarity=0.314  Sum_probs=49.5

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcCCCccEEE
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF  259 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vi  259 (364)
                      .+.++||+|+ |.+|.+.++.+...|+ .|++++++.++.+.+.++.-...+..+-.+.   +.+++..+. -+++|++|
T Consensus         5 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~---~~~~~~~~~-~~~id~lv   79 (246)
T 2ag5_A            5 DGKVIILTAAAQGIGQAAALAFAREGA-KVIATDINESKLQELEKYPGIQTRVLDVTKK---KQIDQFANE-VERLDVLF   79 (246)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHGGGGGSTTEEEEECCTTCH---HHHHHHHHH-CSCCSEEE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHhccCceEEEeeCCCH---HHHHHHHHH-hCCCCEEE
Confidence            4678999998 9999999999999999 5777777776654333332112222222221   223333322 24799999


Q ss_pred             ECCC
Q 017916          260 DCAG  263 (364)
Q Consensus       260 d~~g  263 (364)
                      +++|
T Consensus        80 ~~Ag   83 (246)
T 2ag5_A           80 NVAG   83 (246)
T ss_dssp             ECCC
T ss_pred             ECCc
Confidence            9987

>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}

Probab=96.14  E-value=0.079  Score=48.17  Aligned_cols=116  Identities=19%  Similarity=0.210  Sum_probs=71.9

Q ss_pred             CEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcCCCccEEEECC
Q 017916          183 TNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCA  262 (364)
Q Consensus       183 ~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid~~  262 (364)
                      .+|+|.|+|.+|..+++.+.. .. .|.+++.+.++.+.+++...  .+..+..  + .+.+.++.    .+.|+||+|+
T Consensus        17 mkilvlGaG~vG~~~~~~L~~-~~-~v~~~~~~~~~~~~~~~~~~--~~~~d~~--d-~~~l~~~~----~~~DvVi~~~   85 (365)
T 3abi_A           17 MKVLILGAGNIGRAIAWDLKD-EF-DVYIGDVNNENLEKVKEFAT--PLKVDAS--N-FDKLVEVM----KEFELVIGAL   85 (365)
T ss_dssp             CEEEEECCSHHHHHHHHHHTT-TS-EEEEEESCHHHHHHHTTTSE--EEECCTT--C-HHHHHHHH----TTCSEEEECC
T ss_pred             cEEEEECCCHHHHHHHHHHhc-CC-CeEEEEcCHHHHHHHhccCC--cEEEecC--C-HHHHHHHH----hCCCEEEEec
Confidence            479999999999998887754 34 56777788888777665432  2222221  2 22344443    4689999999


Q ss_pred             CCHHHHHHHHHhcccCCEEEEEcCCCCCccccch-hhhhcCcEEEeecc
Q 017916          263 GFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLT-PAAVREVDVVGVFR  310 (364)
Q Consensus       263 g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~-~~~~~~~~~~~~~~  310 (364)
                      +..-....+-.|+..+-+++++...... ...+. .+...++.+.....
T Consensus        86 p~~~~~~v~~~~~~~g~~yvD~s~~~~~-~~~l~~~a~~~g~~~i~~~G  133 (365)
T 3abi_A           86 PGFLGFKSIKAAIKSKVDMVDVSFMPEN-PLELRDEAEKAQVTIVFDAG  133 (365)
T ss_dssp             CGGGHHHHHHHHHHHTCEEEECCCCSSC-GGGGHHHHHHTTCEEECCCB
T ss_pred             CCcccchHHHHHHhcCcceEeeeccchh-hhhhhhhhccCCceeeecCC
Confidence            9555556677788888889887643222 12222 23345566655433

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*

Probab=96.14  E-value=0.028  Score=47.52  Aligned_cols=81  Identities=20%  Similarity=0.211  Sum_probs=50.4

Q ss_pred             CCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHH-H----HcCCCe-EEecCCC-cccHHHHHHHHHHHcCC
Q 017916          182 ETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-K----ELGADN-IVKVSTN-LQDIAEEVEKIQKAMGT  253 (364)
Q Consensus       182 g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~-~----~lg~~~-~~~~~~~-~~~~~~~i~~~~~~~~~  253 (364)
                      +.++||+|+ +++|.+.++.+...|+ .|+.++++.++.+.+ +    ..+... .+..|-. .+++.+.++.+.+.. +
T Consensus         2 ~k~vlITGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~-g   79 (235)
T 3l77_A            2 MKVAVITGASRGIGEAIARALARDGY-ALALGARSVDRLEKIAHELMQEQGVEVFYHHLDVSKAESVEEFSKKVLERF-G   79 (235)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHCC-HHHHH-S
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhcCCeEEEEEeccCCHHHHHHHHHHHHHhc-C
Confidence            578999998 9999999999999999 577777777665432 2    234332 2222222 223333333332222 4


Q ss_pred             CccEEEECCCC
Q 017916          254 GIDVSFDCAGF  264 (364)
Q Consensus       254 ~~d~vid~~g~  264 (364)
                      ++|++|+++|.
T Consensus        80 ~id~li~~Ag~   90 (235)
T 3l77_A           80 DVDVVVANAGL   90 (235)
T ss_dssp             SCSEEEECCCC
T ss_pred             CCCEEEECCcc
Confidence            79999999873

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}

Probab=96.14  E-value=0.036  Score=47.98  Aligned_cols=82  Identities=30%  Similarity=0.374  Sum_probs=53.2

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHH-HH----cCCCe-EEecCC-CcccHHHHHHHHHHHcC
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KE----LGADN-IVKVST-NLQDIAEEVEKIQKAMG  252 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~-~~----lg~~~-~~~~~~-~~~~~~~~i~~~~~~~~  252 (364)
                      .+.++||+|+ +++|.+.++.+...|+ .|+.++++.++.+.+ ++    .+... .+..|- ..+++.+.++.+.+.. 
T Consensus        19 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-   96 (266)
T 4egf_A           19 DGKRALITGATKGIGADIARAFAAAGA-RLVLSGRDVSELDAARRALGEQFGTDVHTVAIDLAEPDAPAELARRAAEAF-   96 (266)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSTTHHHHHHHHHHHHH-
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHc-
Confidence            4789999998 9999999999999999 577777777665432 22    34332 222222 2234444444444333 


Q ss_pred             CCccEEEECCCC
Q 017916          253 TGIDVSFDCAGF  264 (364)
Q Consensus       253 ~~~d~vid~~g~  264 (364)
                      +++|++|+++|.
T Consensus        97 g~id~lv~nAg~  108 (266)
T 4egf_A           97 GGLDVLVNNAGI  108 (266)
T ss_dssp             TSCSEEEEECCC
T ss_pred             CCCCEEEECCCc
Confidence            479999998873

>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*

Probab=96.14  E-value=0.018  Score=48.37  Aligned_cols=99  Identities=17%  Similarity=0.158  Sum_probs=66.4

Q ss_pred             CCCCCCEEEEEcCCHHHHHHHHHHHHCCCC-EEEEEecChhHHHHHHH----cC-----CCeEEecCCCcccHHHHHHHH
Q 017916          178 NIGPETNVLIMGAGPIGLVTMLGARAFGAP-RIVIVDVDDYRLSVAKE----LG-----ADNIVKVSTNLQDIAEEVEKI  247 (364)
Q Consensus       178 ~~~~g~~VLI~Gag~~G~~ai~la~~~g~~-~vv~~~~~~~~~~~~~~----lg-----~~~~~~~~~~~~~~~~~i~~~  247 (364)
                      .++++++||-.|+|. |..+..+++..|.. .+++++.+++..+.+++    .+     ...+.....   +....   .
T Consensus        74 ~~~~~~~vLDiG~G~-G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~---d~~~~---~  146 (226)
T 1i1n_A           74 QLHEGAKALDVGSGS-GILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVG---DGRMG---Y  146 (226)
T ss_dssp             TSCTTCEEEEETCTT-SHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEES---CGGGC---C
T ss_pred             hCCCCCEEEEEcCCc-CHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEEC---CcccC---c
Confidence            478999999999865 77888888887642 79999999988777653    22     122111111   11100   0


Q ss_pred             HHHcCCCccEEEECCCCHHHHHHHHHhcccCCEEEEEc
Q 017916          248 QKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVG  285 (364)
Q Consensus       248 ~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g  285 (364)
                        .....+|+|+........+..+.+.|+++|+++..-
T Consensus       147 --~~~~~fD~i~~~~~~~~~~~~~~~~LkpgG~lv~~~  182 (226)
T 1i1n_A          147 --AEEAPYDAIHVGAAAPVVPQALIDQLKPGGRLILPV  182 (226)
T ss_dssp             --GGGCCEEEEEECSBBSSCCHHHHHTEEEEEEEEEEE
T ss_pred             --ccCCCcCEEEECCchHHHHHHHHHhcCCCcEEEEEE
Confidence              013469999876655566678899999999998763

>3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genom protein structure initiative, PSI, NEW YORK structural GENO research consortium; HET: NAD; 1.95A {Listeria innocua}

Probab=96.14  E-value=0.026  Score=51.26  Aligned_cols=131  Identities=16%  Similarity=0.134  Sum_probs=82.4

Q ss_pred             CEEEEEcCCHHHHHHHHHHHHC-CCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcCCCccEEEEC
Q 017916          183 TNVLIMGAGPIGLVTMLGARAF-GAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDC  261 (364)
Q Consensus       183 ~~VLI~Gag~~G~~ai~la~~~-g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid~  261 (364)
                      -+|.|.|.|.+|...+..++.. +++.+.+++.+.++.+.++++|+..   |    .++.+    +..  ...+|+|+.|
T Consensus         6 ~~vgiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~a~~~g~~~---~----~~~~~----ll~--~~~~D~V~i~   72 (359)
T 3e18_A            6 YQLVIVGYGGMGSYHVTLASAADNLEVHGVFDILAEKREAAAQKGLKI---Y----ESYEA----VLA--DEKVDAVLIA   72 (359)
T ss_dssp             EEEEEECCSHHHHHHHHHHHTSTTEEEEEEECSSHHHHHHHHTTTCCB---C----SCHHH----HHH--CTTCCEEEEC
T ss_pred             CcEEEECcCHHHHHHHHHHHhCCCcEEEEEEcCCHHHHHHHHhcCCce---e----CCHHH----Hhc--CCCCCEEEEc
Confidence            3688999999998877777665 6655556677888877777777642   2    23222    222  3579999999


Q ss_pred             CCCHHHHHHHHHhcccCCEEEEEcCCCCCccccch---h-hhhcCcEEE-e-eccCCCcHHHHHHHHHcCCC
Q 017916          262 AGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLT---P-AAVREVDVV-G-VFRYKNTWPLCLELLRSGKI  327 (364)
Q Consensus       262 ~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~---~-~~~~~~~~~-~-~~~~~~~~~~~~~~l~~g~~  327 (364)
                      +....+...+..+|..| +-+++.-+.....-...   . .-.+++.+. + ...+...+..+.+++++|.+
T Consensus        73 tp~~~h~~~~~~al~aG-khVl~EKP~a~~~~ea~~l~~~a~~~g~~~~v~~~~r~~p~~~~~k~~i~~g~i  143 (359)
T 3e18_A           73 TPNDSHKELAISALEAG-KHVVCEKPVTMTSEDLLAIMDVAKRVNKHFMVHQNRRWDEDFLIIKEMFEQKTI  143 (359)
T ss_dssp             SCGGGHHHHHHHHHHTT-CEEEEESSCCSSHHHHHHHHHHHHHHTCCEEEECGGGGCHHHHHHHHHHHHTTT
T ss_pred             CCcHHHHHHHHHHHHCC-CCEEeeCCCcCCHHHHHHHHHHHHHhCCeEEEEeeeccCHHHHHHHHHHHcCCC
Confidence            99888888888888855 55556422211110111   1 112233322 2 23346678888899999887

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}

Probab=96.12  E-value=0.036  Score=48.10  Aligned_cols=81  Identities=19%  Similarity=0.217  Sum_probs=52.0

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHH----HHcCCC-eEEecCC-CcccHHHHHHHHHHHcCC
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA----KELGAD-NIVKVST-NLQDIAEEVEKIQKAMGT  253 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~----~~lg~~-~~~~~~~-~~~~~~~~i~~~~~~~~~  253 (364)
                      .+.++||+|+ +++|.+.+..+...|+ .|+.++++.++.+.+    ++.+.. ..+..+- ..+++.+.++++.+.. +
T Consensus        27 ~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~-g  104 (270)
T 3ftp_A           27 DKQVAIVTGASRGIGRAIALELARRGA-MVIGTATTEAGAEGIGAAFKQAGLEGRGAVLNVNDATAVDALVESTLKEF-G  104 (270)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHHHHHH-S
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEEeCCCHHHHHHHHHHHHHHc-C
Confidence            4679999998 9999999999989999 677777777655432    233432 2222222 2233444444443332 4


Q ss_pred             CccEEEECCC
Q 017916          254 GIDVSFDCAG  263 (364)
Q Consensus       254 ~~d~vid~~g  263 (364)
                      ++|++|+++|
T Consensus       105 ~iD~lvnnAg  114 (270)
T 3ftp_A          105 ALNVLVNNAG  114 (270)
T ss_dssp             CCCEEEECCC
T ss_pred             CCCEEEECCC
Confidence            7999999987

>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}

Probab=96.12  E-value=0.035  Score=48.36  Aligned_cols=81  Identities=15%  Similarity=0.172  Sum_probs=51.8

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHH-HH---HcCCCe-EEecCC-CcccHHHHHHHHHHHcCC
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSV-AK---ELGADN-IVKVST-NLQDIAEEVEKIQKAMGT  253 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~-~~---~lg~~~-~~~~~~-~~~~~~~~i~~~~~~~~~  253 (364)
                      .|.++||+|+ +++|.+.++.+...|+ .|+.++++.++.+. .+   ..+... .+..+- ..++..+.++.....  +
T Consensus        32 ~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~--g  108 (275)
T 4imr_A           32 RGRTALVTGSSRGIGAAIAEGLAGAGA-HVILHGVKPGSTAAVQQRIIASGGTAQELAGDLSEAGAGTDLIERAEAI--A  108 (275)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSTTTTHHHHHHHHHTTCCEEEEECCTTSTTHHHHHHHHHHHH--S
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHh--C
Confidence            5789999998 9999999999999999 56777666654332 22   234322 222222 223444444444333  5


Q ss_pred             CccEEEECCCC
Q 017916          254 GIDVSFDCAGF  264 (364)
Q Consensus       254 ~~d~vid~~g~  264 (364)
                      ++|++|+++|.
T Consensus       109 ~iD~lvnnAg~  119 (275)
T 4imr_A          109 PVDILVINASA  119 (275)
T ss_dssp             CCCEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            79999999883

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0

Probab=96.12  E-value=0.038  Score=47.95  Aligned_cols=82  Identities=24%  Similarity=0.294  Sum_probs=53.4

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHH-HHHHcCCCe-EEecCC-CcccHHHHHHHHHHHcCCCcc
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLS-VAKELGADN-IVKVST-NLQDIAEEVEKIQKAMGTGID  256 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~-~~~~lg~~~-~~~~~~-~~~~~~~~i~~~~~~~~~~~d  256 (364)
                      .+.++||+|+ +++|.+.++.+...|+ .|+.++++.++.+ ..++++... .+..|- ..+++.+.++...+.. +++|
T Consensus        10 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-g~id   87 (271)
T 3tzq_B           10 ENKVAIITGACGGIGLETSRVLARAGA-RVVLADLPETDLAGAAASVGRGAVHHVVDLTNEVSVRALIDFTIDTF-GRLD   87 (271)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECTTSCHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHH-SCCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHhCCCeEEEECCCCCHHHHHHHHHHHHHHc-CCCC
Confidence            4789999998 9999999999999999 5677777766554 345565432 222222 2233444444443333 4799


Q ss_pred             EEEECCCC
Q 017916          257 VSFDCAGF  264 (364)
Q Consensus       257 ~vid~~g~  264 (364)
                      ++|+++|.
T Consensus        88 ~lv~nAg~   95 (271)
T 3tzq_B           88 IVDNNAAH   95 (271)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCC
Confidence            99998873

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0

Probab=96.12  E-value=0.03  Score=47.76  Aligned_cols=81  Identities=19%  Similarity=0.240  Sum_probs=53.2

Q ss_pred             CCCCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHH-HHcCCCeE-EecCCCcccHHHHHHHHHHHcCCCc
Q 017916          179 IGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KELGADNI-VKVSTNLQDIAEEVEKIQKAMGTGI  255 (364)
Q Consensus       179 ~~~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~-~~lg~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~  255 (364)
                      -.++.+|||+|+ |.+|.+.++.+...|+ .|+.++++.++.+.+ +++..... ...+-.  + .+.++++.+.. +++
T Consensus        11 ~~~~k~vlVTGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~--~-~~~~~~~~~~~-~~i   85 (249)
T 3f9i_A           11 DLTGKTSLITGASSGIGSAIARLLHKLGS-KVIISGSNEEKLKSLGNALKDNYTIEVCNLA--N-KEECSNLISKT-SNL   85 (249)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCSSEEEEECCTT--S-HHHHHHHHHTC-SCC
T ss_pred             cCCCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHhccCccEEEcCCC--C-HHHHHHHHHhc-CCC
Confidence            357889999998 9999999999989999 577777777765544 44543322 222221  2 22344443322 479


Q ss_pred             cEEEECCCC
Q 017916          256 DVSFDCAGF  264 (364)
Q Consensus       256 d~vid~~g~  264 (364)
                      |++|+++|.
T Consensus        86 d~li~~Ag~   94 (249)
T 3f9i_A           86 DILVCNAGI   94 (249)
T ss_dssp             SEEEECCC-
T ss_pred             CEEEECCCC
Confidence            999999883

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*

Probab=96.11  E-value=0.034  Score=47.22  Aligned_cols=78  Identities=28%  Similarity=0.251  Sum_probs=51.2

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHH-HHcCCCeEEecCCCcccHHHHHHHHHHHcCCCccEE
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVS  258 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~-~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~v  258 (364)
                      ++.+|||+|+ |.+|.+.++.+...|+ .|++++++.++.+.+ +++....++..+-.  + .+.++++.. .-+++|++
T Consensus         6 ~~k~vlITGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~--~-~~~~~~~~~-~~~~id~v   80 (244)
T 3d3w_A            6 AGRRVLVTGAGKGIGRGTVQALHATGA-RVVAVSRTQADLDSLVRECPGIEPVCVDLG--D-WEATERALG-SVGPVDLL   80 (244)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHSTTCEEEECCTT--C-HHHHHHHHT-TCCCCCEE
T ss_pred             CCcEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHcCCCCEEEEeCC--C-HHHHHHHHH-HcCCCCEE
Confidence            4689999998 9999999999999999 577777777665533 34432233333222  2 223444433 12469999


Q ss_pred             EECCC
Q 017916          259 FDCAG  263 (364)
Q Consensus       259 id~~g  263 (364)
                      |+++|
T Consensus        81 i~~Ag   85 (244)
T 3d3w_A           81 VNNAA   85 (244)
T ss_dssp             EECCC
T ss_pred             EECCc
Confidence            99987

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}

Probab=96.10  E-value=0.028  Score=47.46  Aligned_cols=80  Identities=28%  Similarity=0.275  Sum_probs=51.3

Q ss_pred             CCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHH-HHcCCCeEEecCCC-cccHHHHHHHHHHHcCCCccEE
Q 017916          182 ETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KELGADNIVKVSTN-LQDIAEEVEKIQKAMGTGIDVS  258 (364)
Q Consensus       182 g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~-~~lg~~~~~~~~~~-~~~~~~~i~~~~~~~~~~~d~v  258 (364)
                      +.+|||+|+ |.+|.+.++.+...|+ .|+.++++.++.+.+ ++++-...+..+-. .+++.+.++.+.... +++|++
T Consensus         5 ~k~vlVtGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~id~l   82 (234)
T 2ehd_A            5 KGAVLITGASRGIGEATARLLHAKGY-RVGLMARDEKRLQALAAELEGALPLPGDVREEGDWARAVAAMEEAF-GELSAL   82 (234)
T ss_dssp             CCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHHHHHHHH-SCCCEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhhhceEEEecCCCHHHHHHHHHHHHHHc-CCCCEE
Confidence            568999998 9999999999989999 577777777665543 34432223322222 233333344333322 479999


Q ss_pred             EECCC
Q 017916          259 FDCAG  263 (364)
Q Consensus       259 id~~g  263 (364)
                      |+++|
T Consensus        83 i~~Ag   87 (234)
T 2ehd_A           83 VNNAG   87 (234)
T ss_dssp             EECCC
T ss_pred             EECCC
Confidence            99987

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}

Probab=96.10  E-value=0.056  Score=47.16  Aligned_cols=82  Identities=20%  Similarity=0.241  Sum_probs=50.0

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEec-ChhHHHH-HHHc----CCCe-EEecCC-CcccHHHHHHHHHHHc
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDV-DDYRLSV-AKEL----GADN-IVKVST-NLQDIAEEVEKIQKAM  251 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~-~~~~~~~-~~~l----g~~~-~~~~~~-~~~~~~~~i~~~~~~~  251 (364)
                      .+.++||+|+ +++|.+.++.+...|+ .|+.+++ +.++.+. .+++    +... .+..+- ..+++.+.++.+.+. 
T Consensus        24 ~~k~~lVTGas~GIG~~ia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~-  101 (281)
T 3v2h_A           24 MTKTAVITGSTSGIGLAIARTLAKAGA-NIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADMTKPSEIADMMAMVADR-  101 (281)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEECCCCHHHHHHHHHHHHTTCSSCEEEECCCTTCHHHHHHHHHHHHHH-
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCChHHHHHHHHHHhhccCCcEEEEeCCCCCHHHHHHHHHHHHHH-
Confidence            4679999998 9999999999999999 5666666 4444332 2222    2221 222221 223334444444332 


Q ss_pred             CCCccEEEECCCC
Q 017916          252 GTGIDVSFDCAGF  264 (364)
Q Consensus       252 ~~~~d~vid~~g~  264 (364)
                      -+++|++|+++|.
T Consensus       102 ~g~iD~lv~nAg~  114 (281)
T 3v2h_A          102 FGGADILVNNAGV  114 (281)
T ss_dssp             TSSCSEEEECCCC
T ss_pred             CCCCCEEEECCCC
Confidence            3479999999883

>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*

Probab=96.10  E-value=0.045  Score=45.73  Aligned_cols=104  Identities=18%  Similarity=0.196  Sum_probs=67.9

Q ss_pred             CCCCCCEEEEEcCCHHHHHHHHHHHHCC-CCEEEEEecChhHHHHHHH----cCCCe-EEecCCCcccHHHHHHHHHHHc
Q 017916          178 NIGPETNVLIMGAGPIGLVTMLGARAFG-APRIVIVDVDDYRLSVAKE----LGADN-IVKVSTNLQDIAEEVEKIQKAM  251 (364)
Q Consensus       178 ~~~~g~~VLI~Gag~~G~~ai~la~~~g-~~~vv~~~~~~~~~~~~~~----lg~~~-~~~~~~~~~~~~~~i~~~~~~~  251 (364)
                      ...++.+||-.|+|. |..++.+|+.++ ...+++++.+++..+.+++    .|... +...   ..+..+.+..+....
T Consensus        55 ~~~~~~~vLdiG~G~-G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~---~~d~~~~~~~~~~~~  130 (223)
T 3duw_A           55 QIQGARNILEIGTLG-GYSTIWLARGLSSGGRVVTLEASEKHADIARSNIERANLNDRVEVR---TGLALDSLQQIENEK  130 (223)
T ss_dssp             HHHTCSEEEEECCTT-SHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEE---ESCHHHHHHHHHHTT
T ss_pred             HhhCCCEEEEecCCc-cHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEE---EcCHHHHHHHHHhcC
Confidence            345778999998764 778888998874 3389999999987776653    45432 2111   134444343333221


Q ss_pred             CCCccEEEECCCC---HHHHHHHHHhcccCCEEEEEc
Q 017916          252 GTGIDVSFDCAGF---NKTMSTALSATRAGGKVCLVG  285 (364)
Q Consensus       252 ~~~~d~vid~~g~---~~~~~~~~~~l~~~G~~v~~g  285 (364)
                      ...+|+||-....   ...+..+.+.|+|+|.++.-+
T Consensus       131 ~~~fD~v~~d~~~~~~~~~l~~~~~~L~pgG~lv~~~  167 (223)
T 3duw_A          131 YEPFDFIFIDADKQNNPAYFEWALKLSRPGTVIIGDN  167 (223)
T ss_dssp             CCCCSEEEECSCGGGHHHHHHHHHHTCCTTCEEEEES
T ss_pred             CCCcCEEEEcCCcHHHHHHHHHHHHhcCCCcEEEEeC
Confidence            2569999843321   457788899999999888764

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*

Probab=96.10  E-value=0.06  Score=47.31  Aligned_cols=81  Identities=16%  Similarity=0.197  Sum_probs=51.4

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHH-HHHc----CCCe-EEecCCC-cccHHHHHHHHHHHcC
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSV-AKEL----GADN-IVKVSTN-LQDIAEEVEKIQKAMG  252 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~-~~~l----g~~~-~~~~~~~-~~~~~~~i~~~~~~~~  252 (364)
                      .+.++||+|+ |.+|.+.+..+...|+ .|+.++++.++.+. .+++    +... .+..+-. .+++.+.++..... .
T Consensus        25 ~~k~vlITGasggiG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-~  102 (302)
T 1w6u_A           25 QGKVAFITGGGTGLGKGMTTLLSSLGA-QCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKV-A  102 (302)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHH-T
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCHHHHHHHHHHHHHH-c
Confidence            4678999998 9999999999988999 57777777665432 2222    4321 2222222 23333344433332 3


Q ss_pred             CCccEEEECCC
Q 017916          253 TGIDVSFDCAG  263 (364)
Q Consensus       253 ~~~d~vid~~g  263 (364)
                      +++|++|+++|
T Consensus       103 g~id~li~~Ag  113 (302)
T 1w6u_A          103 GHPNIVINNAA  113 (302)
T ss_dssp             CSCSEEEECCC
T ss_pred             CCCCEEEECCC
Confidence            47999999987

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2

Probab=96.09  E-value=0.032  Score=47.85  Aligned_cols=82  Identities=21%  Similarity=0.303  Sum_probs=52.8

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHH-HHHcCCCe-EEecCC-CcccHHHHHHHHHHHcCCCcc
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSV-AKELGADN-IVKVST-NLQDIAEEVEKIQKAMGTGID  256 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~-~~~lg~~~-~~~~~~-~~~~~~~~i~~~~~~~~~~~d  256 (364)
                      .+.++||+|+ |.+|.+.++.+...|+ .|+.++++.++.+. .++++... .+..|- ..+++.+.++...+.. +++|
T Consensus         5 ~~k~vlVTGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~-g~id   82 (253)
T 1hxh_A            5 QGKVALVTGGASGVGLEVVKLLLGEGA-KVAFSDINEAAGQQLAAELGERSMFVRHDVSSEADWTLVMAAVQRRL-GTLN   82 (253)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHHHCTTEEEECCCTTCHHHHHHHHHHHHHHH-CSCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHHHHHc-CCCC
Confidence            4678999998 9999999999988999 57777777766543 34455332 222221 1233333444433322 4799


Q ss_pred             EEEECCCC
Q 017916          257 VSFDCAGF  264 (364)
Q Consensus       257 ~vid~~g~  264 (364)
                      ++|+++|.
T Consensus        83 ~lv~~Ag~   90 (253)
T 1hxh_A           83 VLVNNAGI   90 (253)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCC
Confidence            99999873

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2

Probab=96.09  E-value=0.048  Score=46.99  Aligned_cols=82  Identities=26%  Similarity=0.414  Sum_probs=51.7

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHH-HHc---CCCe-EEecCC-CcccHHHHHHHHHHHcCC
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KEL---GADN-IVKVST-NLQDIAEEVEKIQKAMGT  253 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~-~~l---g~~~-~~~~~~-~~~~~~~~i~~~~~~~~~  253 (364)
                      .+.++||+|+ |.+|.+.++.+...|+ .|+.++++.++.+.+ +++   +... .+..+- ..+++.+.+..+.... +
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-g   83 (262)
T 1zem_A            6 NGKVCLVTGAGGNIGLATALRLAEEGT-AIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDF-G   83 (262)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHH-S
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHh-C
Confidence            4678999998 9999999999999999 577777776655432 232   4321 222222 2233333344433322 4


Q ss_pred             CccEEEECCCC
Q 017916          254 GIDVSFDCAGF  264 (364)
Q Consensus       254 ~~d~vid~~g~  264 (364)
                      ++|++|+++|.
T Consensus        84 ~id~lv~nAg~   94 (262)
T 1zem_A           84 KIDFLFNNAGY   94 (262)
T ss_dssp             CCCEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            79999998873

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A

Probab=96.09  E-value=0.035  Score=47.34  Aligned_cols=81  Identities=19%  Similarity=0.187  Sum_probs=51.0

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHH-HHHcCC---CeEEecCCC-cccHHHHHHHHHHHcCCC
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSV-AKELGA---DNIVKVSTN-LQDIAEEVEKIQKAMGTG  254 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~-~~~lg~---~~~~~~~~~-~~~~~~~i~~~~~~~~~~  254 (364)
                      .+.++||+|+ |.+|.+.++.+...|+ .|++++++.++.+. .+++..   ...+..+-. .+++.+.++.+.... ++
T Consensus         5 ~~k~vlVtGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~   82 (251)
T 1zk4_A            5 DGKVAIITGGTLGIGLAIATKFVEEGA-KVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAF-GP   82 (251)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHH-SS
T ss_pred             CCcEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhhccCceEEEECCCCCHHHHHHHHHHHHHHh-CC
Confidence            4678999998 9999999999988999 57777777665543 334431   122222222 223333333333222 47


Q ss_pred             ccEEEECCC
Q 017916          255 IDVSFDCAG  263 (364)
Q Consensus       255 ~d~vid~~g  263 (364)
                      +|++|+++|
T Consensus        83 id~li~~Ag   91 (251)
T 1zk4_A           83 VSTLVNNAG   91 (251)
T ss_dssp             CCEEEECCC
T ss_pred             CCEEEECCC
Confidence            999999987

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}

Probab=96.08  E-value=0.056  Score=46.41  Aligned_cols=81  Identities=21%  Similarity=0.300  Sum_probs=50.2

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHH-HHc---C-------C-CeEEecCCC-cccHHHHHHH
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KEL---G-------A-DNIVKVSTN-LQDIAEEVEK  246 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~-~~l---g-------~-~~~~~~~~~-~~~~~~~i~~  246 (364)
                      .+.+|||+|+ |.+|.+.+..+...|+ .|+.++++.++.+.+ +++   +       . ...+..+-. .+++.+.++.
T Consensus         6 ~~k~vlITGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   84 (264)
T 2pd6_A            6 RSALALVTGAGSGIGRAVSVRLAGEGA-TVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAFQADVSEARAARCLLEQ   84 (264)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHTC------------CCEEEECCTTSHHHHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHhcCccccccCcceEEEEecCCCHHHHHHHHHH
Confidence            4678999998 9999999999888999 577777777665433 333   1       1 122222221 2333334444


Q ss_pred             HHHHcCCCc-cEEEECCC
Q 017916          247 IQKAMGTGI-DVSFDCAG  263 (364)
Q Consensus       247 ~~~~~~~~~-d~vid~~g  263 (364)
                      +....+ ++ |++|+++|
T Consensus        85 ~~~~~g-~i~d~vi~~Ag  101 (264)
T 2pd6_A           85 VQACFS-RPPSVVVSCAG  101 (264)
T ss_dssp             HHHHHS-SCCSEEEECCC
T ss_pred             HHHHhC-CCCeEEEECCC
Confidence            433333 56 99999987

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*

Probab=96.08  E-value=0.051  Score=47.28  Aligned_cols=81  Identities=20%  Similarity=0.265  Sum_probs=52.0

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHH-HHH----cCCCe-EEecCC-CcccHHHHHHHHHHHcC
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSV-AKE----LGADN-IVKVST-NLQDIAEEVEKIQKAMG  252 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~-~~~----lg~~~-~~~~~~-~~~~~~~~i~~~~~~~~  252 (364)
                      .|.++||+|+ +++|.+.++.+...|+ .|+.++++.++.+. .++    .+... .+..|- ..+++.+.++.+.+.. 
T Consensus        26 ~~k~~lVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-  103 (277)
T 4fc7_A           26 RDKVAFITGGGSGIGFRIAEIFMRHGC-HTVIASRSLPRVLTAARKLAGATGRRCLPLSMDVRAPPAVMAAVDQALKEF-  103 (277)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHTTTC-EEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc-
Confidence            5789999998 9999999999999999 67777777665432 222    24322 222222 2233444444443333 


Q ss_pred             CCccEEEECCC
Q 017916          253 TGIDVSFDCAG  263 (364)
Q Consensus       253 ~~~d~vid~~g  263 (364)
                      +++|++|+++|
T Consensus       104 g~id~lv~nAg  114 (277)
T 4fc7_A          104 GRIDILINCAA  114 (277)
T ss_dssp             SCCCEEEECCC
T ss_pred             CCCCEEEECCc
Confidence            47999999988

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*

Probab=96.08  E-value=0.044  Score=46.88  Aligned_cols=83  Identities=22%  Similarity=0.277  Sum_probs=50.6

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecCh--hHHHHHHHc--CCC-eEEecCCC-c-ccHHHHHHHHHHHcC
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDD--YRLSVAKEL--GAD-NIVKVSTN-L-QDIAEEVEKIQKAMG  252 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~--~~~~~~~~l--g~~-~~~~~~~~-~-~~~~~~i~~~~~~~~  252 (364)
                      .+.++||+|+ |.+|.+.++.+...|+++|+.++++.  +..+.+.+.  +.. ..+..|-. . +++.+.++.+.+.. 
T Consensus         4 ~~k~vlVtGas~gIG~~~a~~l~~~G~~~v~~~~r~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~-   82 (254)
T 1sby_A            4 TNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQL-   82 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHHH-
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCCcEEEEEecCchHHHHHHHHHhCCCceEEEEEEecCCChHHHHHHHHHHHHhc-
Confidence            4678999998 99999999999999996466666654  233333332  211 12222222 1 33444444443322 


Q ss_pred             CCccEEEECCCC
Q 017916          253 TGIDVSFDCAGF  264 (364)
Q Consensus       253 ~~~d~vid~~g~  264 (364)
                      +++|++|+++|.
T Consensus        83 g~id~lv~~Ag~   94 (254)
T 1sby_A           83 KTVDILINGAGI   94 (254)
T ss_dssp             SCCCEEEECCCC
T ss_pred             CCCCEEEECCcc
Confidence            479999999873

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*

Probab=96.07  E-value=0.045  Score=47.18  Aligned_cols=81  Identities=22%  Similarity=0.267  Sum_probs=51.8

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHH-HHcCCC-eEEecCC-CcccHHHHHHHHHHHcCCCcc
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KELGAD-NIVKVST-NLQDIAEEVEKIQKAMGTGID  256 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~-~~lg~~-~~~~~~~-~~~~~~~~i~~~~~~~~~~~d  256 (364)
                      .+.++||+|+ |.+|.+.++.+...|+ .|++++++.++.+.+ ++++.. ..+..+- ..+++.+.++...+.. +++|
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~-g~iD   83 (260)
T 1nff_A            6 TGKVALVSGGARGMGASHVRAMVAEGA-KVVFGDILDEEGKAMAAELADAARYVHLDVTQPAQWKAAVDTAVTAF-GGLH   83 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTGGGEEEEECCTTCHHHHHHHHHHHHHHH-SCCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhhcCceEEEecCCCHHHHHHHHHHHHHHc-CCCC
Confidence            4678999998 9999999999888999 577777777665433 344321 1222222 2233344444443332 3799


Q ss_pred             EEEECCC
Q 017916          257 VSFDCAG  263 (364)
Q Consensus       257 ~vid~~g  263 (364)
                      ++|+++|
T Consensus        84 ~lv~~Ag   90 (260)
T 1nff_A           84 VLVNNAG   90 (260)
T ss_dssp             EEEECCC
T ss_pred             EEEECCC
Confidence            9999987

>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*

Probab=96.07  E-value=0.052  Score=47.34  Aligned_cols=98  Identities=15%  Similarity=0.191  Sum_probs=68.4

Q ss_pred             HHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHc----CCC-eEEecCCCcccHHHHHHHHHH
Q 017916          175 RRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKEL----GAD-NIVKVSTNLQDIAEEVEKIQK  249 (364)
Q Consensus       175 ~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~l----g~~-~~~~~~~~~~~~~~~i~~~~~  249 (364)
                      +...++++++||-.|+|. |..+..+++..|. .+++++.+++..+.+++.    +.. .+....   .++.    .+  
T Consensus        58 ~~~~~~~~~~vLDiGcG~-G~~~~~l~~~~~~-~v~gvd~s~~~~~~a~~~~~~~~~~~~~~~~~---~d~~----~~--  126 (287)
T 1kpg_A           58 GKLGLQPGMTLLDVGCGW-GATMMRAVEKYDV-NVVGLTLSKNQANHVQQLVANSENLRSKRVLL---AGWE----QF--  126 (287)
T ss_dssp             TTTTCCTTCEEEEETCTT-SHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHTCCCCSCEEEEE---SCGG----GC--
T ss_pred             HHcCCCCcCEEEEECCcc-cHHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHhcCCCCCeEEEE---CChh----hC--
Confidence            456788999999999765 7788888877788 899999999888777653    322 111111   1211    11  


Q ss_pred             HcCCCccEEEEC-----CC---CHHHHHHHHHhcccCCEEEEEc
Q 017916          250 AMGTGIDVSFDC-----AG---FNKTMSTALSATRAGGKVCLVG  285 (364)
Q Consensus       250 ~~~~~~d~vid~-----~g---~~~~~~~~~~~l~~~G~~v~~g  285 (364)
                        .+.+|+|+..     .+   -...+..+.+.|+|+|+++...
T Consensus       127 --~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~  168 (287)
T 1kpg_A          127 --DEPVDRIVSIGAFEHFGHERYDAFFSLAHRLLPADGVMLLHT  168 (287)
T ss_dssp             --CCCCSEEEEESCGGGTCTTTHHHHHHHHHHHSCTTCEEEEEE
T ss_pred             --CCCeeEEEEeCchhhcChHHHHHHHHHHHHhcCCCCEEEEEE
Confidence              2579999864     22   1467888999999999998765

>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*

Probab=96.07  E-value=0.057  Score=49.64  Aligned_cols=106  Identities=13%  Similarity=0.090  Sum_probs=68.0

Q ss_pred             HHHHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHH-----------HcCC--CeEEecCCCccc
Q 017916          173 ACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAK-----------ELGA--DNIVKVSTNLQD  239 (364)
Q Consensus       173 ~l~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~-----------~lg~--~~~~~~~~~~~~  239 (364)
                      .+...+++++++||=.|+|. |..++++|+..|+..+++++.+++-.++++           .+|.  ..+-....+-.+
T Consensus       165 il~~l~l~~gd~VLDLGCGt-G~l~l~lA~~~g~~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl~~~rVefi~GD~~~  243 (438)
T 3uwp_A          165 MIDEIKMTDDDLFVDLGSGV-GQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTLERGDFLS  243 (438)
T ss_dssp             HHHHHCCCTTCEEEEESCTT-SHHHHHHHHHCCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHHTBCCCEEEEEECCTTS
T ss_pred             HHHhcCCCCCCEEEEeCCCC-CHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEECcccC
Confidence            34678899999999998765 778889998889877999999986554443           2343  232211111112


Q ss_pred             HHHHHHHHHHHcCCCccEEEEC-C-CC---HHHHHHHHHhcccCCEEEEEc
Q 017916          240 IAEEVEKIQKAMGTGIDVSFDC-A-GF---NKTMSTALSATRAGGKVCLVG  285 (364)
Q Consensus       240 ~~~~i~~~~~~~~~~~d~vid~-~-g~---~~~~~~~~~~l~~~G~~v~~g  285 (364)
                      ..  ....    -..+|+||-. . -.   ...+.+.++.|+|||+++.+.
T Consensus       244 lp--~~d~----~~~aDVVf~Nn~~F~pdl~~aL~Ei~RvLKPGGrIVssE  288 (438)
T 3uwp_A          244 EE--WRER----IANTSVIFVNNFAFGPEVDHQLKERFANMKEGGRIVSSK  288 (438)
T ss_dssp             HH--HHHH----HHTCSEEEECCTTCCHHHHHHHHHHHTTSCTTCEEEESS
T ss_pred             Cc--cccc----cCCccEEEEcccccCchHHHHHHHHHHcCCCCcEEEEee
Confidence            11  1110    0258998842 1 11   245567788999999999875

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0

Probab=96.07  E-value=0.038  Score=47.58  Aligned_cols=81  Identities=20%  Similarity=0.217  Sum_probs=49.3

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEE-ecChhHHHHHHHc----CCC-eEEecCC-CcccHHHHHHHHHHHcC
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIV-DVDDYRLSVAKEL----GAD-NIVKVST-NLQDIAEEVEKIQKAMG  252 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~-~~~~~~~~~~~~l----g~~-~~~~~~~-~~~~~~~~i~~~~~~~~  252 (364)
                      .+.++||+|+ +++|.+.++.+...|++ |+.+ ..+.+..+.+++.    +.. ..+..|- ..+++.+.++++.+.. 
T Consensus         6 ~~k~vlVTGas~gIG~~~a~~l~~~G~~-v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~-   83 (264)
T 3i4f_A            6 FVRHALITAGTKGLGKQVTEKLLAKGYS-VTVTYHSDTTAMETMKETYKDVEERLQFVQADVTKKEDLHKIVEEAMSHF-   83 (264)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTCE-EEEEESSCHHHHHHHHHHTGGGGGGEEEEECCTTSHHHHHHHHHHHHHHH-
T ss_pred             ccCEEEEeCCCchhHHHHHHHHHHCCCE-EEEEcCCChHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHh-
Confidence            3578999998 99999999999899995 5555 4444444444332    221 1222222 2233444444443332 


Q ss_pred             CCccEEEECCC
Q 017916          253 TGIDVSFDCAG  263 (364)
Q Consensus       253 ~~~d~vid~~g  263 (364)
                      +++|++|+++|
T Consensus        84 g~id~lv~~Ag   94 (264)
T 3i4f_A           84 GKIDFLINNAG   94 (264)
T ss_dssp             SCCCEEECCCC
T ss_pred             CCCCEEEECCc
Confidence            47999999998

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*

Probab=96.06  E-value=0.049  Score=46.26  Aligned_cols=81  Identities=22%  Similarity=0.309  Sum_probs=51.1

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHH-HH----cCCCe-EEecCC-CcccHHHHHHHHHHHcC
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KE----LGADN-IVKVST-NLQDIAEEVEKIQKAMG  252 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~-~~----lg~~~-~~~~~~-~~~~~~~~i~~~~~~~~  252 (364)
                      .+.++||+|+ |.+|...++.+...|+ .|++++++.++.+.+ ++    .+... .+..+- ..+++.+.++++... -
T Consensus         6 ~~~~vlVtGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~   83 (248)
T 2pnf_A            6 QGKVSLVTGSTRGIGRAIAEKLASAGS-TVIITGTSGERAKAVAEEIANKYGVKAHGVEMNLLSEESINKAFEEIYNL-V   83 (248)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHH-S
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHhhcCCceEEEEccCCCHHHHHHHHHHHHHh-c
Confidence            4678999998 9999999999888999 577777776654433 22    34322 222222 223333334433332 3


Q ss_pred             CCccEEEECCC
Q 017916          253 TGIDVSFDCAG  263 (364)
Q Consensus       253 ~~~d~vid~~g  263 (364)
                      +++|++|+++|
T Consensus        84 ~~~d~vi~~Ag   94 (248)
T 2pnf_A           84 DGIDILVNNAG   94 (248)
T ss_dssp             SCCSEEEECCC
T ss_pred             CCCCEEEECCC
Confidence            47999999987

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*

Probab=96.02  E-value=0.032  Score=48.37  Aligned_cols=82  Identities=20%  Similarity=0.233  Sum_probs=49.9

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEec-ChhHHHH----HHHcCCCe-EEecCCC-cccHHHHHHHHHHHcC
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDV-DDYRLSV----AKELGADN-IVKVSTN-LQDIAEEVEKIQKAMG  252 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~-~~~~~~~----~~~lg~~~-~~~~~~~-~~~~~~~i~~~~~~~~  252 (364)
                      .+.++||+|+ +++|.+.++.+...|++ |+.+.+ +.++.+.    ++..+... .+..|-. .+++.+.++++.+.. 
T Consensus        27 ~~k~vlVTGas~gIG~aia~~la~~G~~-V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~~~-  104 (269)
T 4dmm_A           27 TDRIALVTGASRGIGRAIALELAAAGAK-VAVNYASSAGAADEVVAAIAAAGGEAFAVKADVSQESEVEALFAAVIERW-  104 (269)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCE-EEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH-
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCE-EEEEeCCChHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc-
Confidence            5789999998 99999999999999995 555544 4444332    22334332 2222222 233333444443332 


Q ss_pred             CCccEEEECCCC
Q 017916          253 TGIDVSFDCAGF  264 (364)
Q Consensus       253 ~~~d~vid~~g~  264 (364)
                      +++|++|+++|.
T Consensus       105 g~id~lv~nAg~  116 (269)
T 4dmm_A          105 GRLDVLVNNAGI  116 (269)
T ss_dssp             SCCCEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            479999999874

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*

Probab=96.02  E-value=0.031  Score=47.77  Aligned_cols=81  Identities=22%  Similarity=0.334  Sum_probs=51.8

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHH-HHHcCCC--eEEecCCC-cccHHHHHHHHHHHcCCCc
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSV-AKELGAD--NIVKVSTN-LQDIAEEVEKIQKAMGTGI  255 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~-~~~lg~~--~~~~~~~~-~~~~~~~i~~~~~~~~~~~  255 (364)
                      .+.++||+|+ |.+|.+.++.+...|+ .|++++++.++.+. .++++..  ..+..+-. .+++.+.++.+..  -+++
T Consensus        10 ~~k~vlITGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~--~~~i   86 (254)
T 2wsb_A           10 DGACAAVTGAGSGIGLEICRAFAASGA-RLILIDREAAALDRAAQELGAAVAARIVADVTDAEAMTAAAAEAEA--VAPV   86 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHGGGEEEEEECCTTCHHHHHHHHHHHHH--HSCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhcccceeEEEEecCCHHHHHHHHHHHHh--hCCC
Confidence            4678999998 9999999999988999 57777777766543 3444432  22222222 2233333333322  2479


Q ss_pred             cEEEECCCC
Q 017916          256 DVSFDCAGF  264 (364)
Q Consensus       256 d~vid~~g~  264 (364)
                      |++|+++|.
T Consensus        87 d~li~~Ag~   95 (254)
T 2wsb_A           87 SILVNSAGI   95 (254)
T ss_dssp             CEEEECCCC
T ss_pred             cEEEECCcc
Confidence            999999873

>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*

Probab=96.02  E-value=0.036  Score=49.15  Aligned_cols=99  Identities=17%  Similarity=0.284  Sum_probs=68.1

Q ss_pred             HHcC-CCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHH----cCCC---eEEecCCCcccHHHHHHH
Q 017916          175 RRAN-IGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKE----LGAD---NIVKVSTNLQDIAEEVEK  246 (364)
Q Consensus       175 ~~~~-~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~----lg~~---~~~~~~~~~~~~~~~i~~  246 (364)
                      +... ++++++||-.|+|. |..+..+++..|+ .+++++.+++..+.+++    .|..   .++.-+.  .++.     
T Consensus       110 ~~l~~~~~~~~vLDiGcG~-G~~~~~la~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~--~~~~-----  180 (312)
T 3vc1_A          110 DHLGQAGPDDTLVDAGCGR-GGSMVMAHRRFGS-RVEGVTLSAAQADFGNRRARELRIDDHVRSRVCNM--LDTP-----  180 (312)
T ss_dssp             TTSCCCCTTCEEEEESCTT-SHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCT--TSCC-----
T ss_pred             HHhccCCCCCEEEEecCCC-CHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECCh--hcCC-----
Confidence            3444 78999999998765 7778888887777 79999999988776654    3432   1221111  1110     


Q ss_pred             HHHHcCCCccEEEEC-----CCCHHHHHHHHHhcccCCEEEEEc
Q 017916          247 IQKAMGTGIDVSFDC-----AGFNKTMSTALSATRAGGKVCLVG  285 (364)
Q Consensus       247 ~~~~~~~~~d~vid~-----~g~~~~~~~~~~~l~~~G~~v~~g  285 (364)
                         ...+.+|+|+..     ..-...+..+.+.|+|+|+++...
T Consensus       181 ---~~~~~fD~V~~~~~l~~~~~~~~l~~~~~~LkpgG~l~~~~  221 (312)
T 3vc1_A          181 ---FDKGAVTASWNNESTMYVDLHDLFSEHSRFLKVGGRYVTIT  221 (312)
T ss_dssp             ---CCTTCEEEEEEESCGGGSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             ---CCCCCEeEEEECCchhhCCHHHHHHHHHHHcCCCcEEEEEE
Confidence               013579999863     233578889999999999999875

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}

Probab=96.00  E-value=0.057  Score=46.23  Aligned_cols=81  Identities=22%  Similarity=0.418  Sum_probs=50.8

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHH-HH---HcCCC-eEEecCCC-cccHHHHHHHHHHHcCC
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSV-AK---ELGAD-NIVKVSTN-LQDIAEEVEKIQKAMGT  253 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~-~~---~lg~~-~~~~~~~~-~~~~~~~i~~~~~~~~~  253 (364)
                      .+.+|||+|+ |.+|.+.++.+...|+ .|++++++.++.+. .+   ..+.. ..+..|-. .+++.+.++.+.+.. +
T Consensus        12 ~~k~vlItGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~   89 (260)
T 3awd_A           12 DNRVAIVTGGAQNIGLACVTALAEAGA-RVIIADLDEAMATKAVEDLRMEGHDVSSVVMDVTNTESVQNAVRSVHEQE-G   89 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH-S
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHc-C
Confidence            4689999998 9999999999988999 57777777665432 22   22432 22222222 233333344333322 4


Q ss_pred             CccEEEECCC
Q 017916          254 GIDVSFDCAG  263 (364)
Q Consensus       254 ~~d~vid~~g  263 (364)
                      ++|++|.++|
T Consensus        90 ~id~vi~~Ag   99 (260)
T 3awd_A           90 RVDILVACAG   99 (260)
T ss_dssp             CCCEEEECCC
T ss_pred             CCCEEEECCC
Confidence            7999999887

>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*

Probab=95.99  E-value=0.026  Score=46.84  Aligned_cols=98  Identities=21%  Similarity=0.154  Sum_probs=68.1

Q ss_pred             cCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcCCCcc
Q 017916          177 ANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGID  256 (364)
Q Consensus       177 ~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d  256 (364)
                      ..+.++.+||-.|+|. |..+..+++. |. .+++++.+++..+.+++.+...+......-.++         ...+.+|
T Consensus        42 ~~~~~~~~vLdiG~G~-G~~~~~l~~~-~~-~v~~~D~s~~~~~~a~~~~~~~~~~~~~d~~~~---------~~~~~~D  109 (218)
T 3ou2_A           42 RAGNIRGDVLELASGT-GYWTRHLSGL-AD-RVTALDGSAEMIAEAGRHGLDNVEFRQQDLFDW---------TPDRQWD  109 (218)
T ss_dssp             TTTTSCSEEEEESCTT-SHHHHHHHHH-SS-EEEEEESCHHHHHHHGGGCCTTEEEEECCTTSC---------CCSSCEE
T ss_pred             hcCCCCCeEEEECCCC-CHHHHHHHhc-CC-eEEEEeCCHHHHHHHHhcCCCCeEEEecccccC---------CCCCcee
Confidence            4478889999998765 6677777777 76 799999999999888886643322111111111         1246799


Q ss_pred             EEEECCC-----C---HHHHHHHHHhcccCCEEEEEcC
Q 017916          257 VSFDCAG-----F---NKTMSTALSATRAGGKVCLVGM  286 (364)
Q Consensus       257 ~vid~~g-----~---~~~~~~~~~~l~~~G~~v~~g~  286 (364)
                      +|+....     .   ...+..+.+.|+|+|.++....
T Consensus       110 ~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~  147 (218)
T 3ou2_A          110 AVFFAHWLAHVPDDRFEAFWESVRSAVAPGGVVEFVDV  147 (218)
T ss_dssp             EEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             EEEEechhhcCCHHHHHHHHHHHHHHcCCCeEEEEEeC
Confidence            9986432     1   4567888999999999988754

>1nvm_B Acetaldehyde dehydrogenase (acylating), 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: c.2.1.3 d.81.1.1

Probab=95.98  E-value=0.032  Score=49.54  Aligned_cols=92  Identities=23%  Similarity=0.252  Sum_probs=63.4

Q ss_pred             CEEEEEcCCHHHHHHHHHHHH--CCCCEEEEEecChhH--HHHHHHcCCCeEEecCCCcccHHHHHHHHHH-HcCCCccE
Q 017916          183 TNVLIMGAGPIGLVTMLGARA--FGAPRIVIVDVDDYR--LSVAKELGADNIVKVSTNLQDIAEEVEKIQK-AMGTGIDV  257 (364)
Q Consensus       183 ~~VLI~Gag~~G~~ai~la~~--~g~~~vv~~~~~~~~--~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~-~~~~~~d~  257 (364)
                      -+|.|.|+|.+|...+..+..  -+.+.+.+++.++++  .++.+++|.....      .+    +.++.. +...++|+
T Consensus         5 irVaIIG~G~iG~~~~~~l~~~~~~~elvav~d~~~~~~~~~~a~~~g~~~~~------~~----~e~ll~~~~~~~iDv   74 (312)
T 1nvm_B            5 LKVAIIGSGNIGTDLMIKVLRNAKYLEMGAMVGIDAASDGLARAQRMGVTTTY------AG----VEGLIKLPEFADIDF   74 (312)
T ss_dssp             EEEEEECCSHHHHHHHHHHHHHCSSEEEEEEECSCTTCHHHHHHHHTTCCEES------SH----HHHHHHSGGGGGEEE
T ss_pred             CEEEEEcCcHHHHHHHHHHHhhCcCeEEEEEEeCChhhhHHHHHHHcCCCccc------CC----HHHHHhccCCCCCcE
Confidence            478999999999988888743  466556666666555  5677788865211      12    222322 11357999


Q ss_pred             EEECCCCHHHHHHHHHhccc--CCEEEEE
Q 017916          258 SFDCAGFNKTMSTALSATRA--GGKVCLV  284 (364)
Q Consensus       258 vid~~g~~~~~~~~~~~l~~--~G~~v~~  284 (364)
                      ||+|++...+......+++.  |.+++..
T Consensus        75 V~~atp~~~h~~~a~~al~a~~Gk~Vi~e  103 (312)
T 1nvm_B           75 VFDATSASAHVQNEALLRQAKPGIRLIDL  103 (312)
T ss_dssp             EEECSCHHHHHHHHHHHHHHCTTCEEEEC
T ss_pred             EEECCChHHHHHHHHHHHHhCCCCEEEEc
Confidence            99999977777888888887  7777764

>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*

Probab=95.97  E-value=0.054  Score=43.70  Aligned_cols=101  Identities=20%  Similarity=0.257  Sum_probs=68.1

Q ss_pred             HHHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHH----cCC-CeEEecCCCcccHHHHHHHHH
Q 017916          174 CRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKE----LGA-DNIVKVSTNLQDIAEEVEKIQ  248 (364)
Q Consensus       174 l~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~----lg~-~~~~~~~~~~~~~~~~i~~~~  248 (364)
                      +....+.++++||..|+|. |..+..+++..  ..+++++.+++..+.+++    .+. ..+...   ..++.+.+    
T Consensus        26 ~~~~~~~~~~~vldiG~G~-G~~~~~l~~~~--~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~---~~d~~~~~----   95 (192)
T 1l3i_A           26 MCLAEPGKNDVAVDVGCGT-GGVTLELAGRV--RRVYAIDRNPEAISTTEMNLQRHGLGDNVTLM---EGDAPEAL----   95 (192)
T ss_dssp             HHHHCCCTTCEEEEESCTT-SHHHHHHHTTS--SEEEEEESCHHHHHHHHHHHHHTTCCTTEEEE---ESCHHHHH----
T ss_pred             HHhcCCCCCCEEEEECCCC-CHHHHHHHHhc--CEEEEEECCHHHHHHHHHHHHHcCCCcceEEE---ecCHHHhc----
Confidence            3556788999999999866 77777887766  489999999988777664    344 222111   12332211    


Q ss_pred             HHcCCCccEEEECCC---CHHHHHHHHHhcccCCEEEEEc
Q 017916          249 KAMGTGIDVSFDCAG---FNKTMSTALSATRAGGKVCLVG  285 (364)
Q Consensus       249 ~~~~~~~d~vid~~g---~~~~~~~~~~~l~~~G~~v~~g  285 (364)
                      . ....+|+|+....   -...+..+.+.|+++|+++...
T Consensus        96 ~-~~~~~D~v~~~~~~~~~~~~l~~~~~~l~~gG~l~~~~  134 (192)
T 1l3i_A           96 C-KIPDIDIAVVGGSGGELQEILRIIKDKLKPGGRIIVTA  134 (192)
T ss_dssp             T-TSCCEEEEEESCCTTCHHHHHHHHHHTEEEEEEEEEEE
T ss_pred             c-cCCCCCEEEECCchHHHHHHHHHHHHhcCCCcEEEEEe
Confidence            1 1147999996543   1467788899999999998763

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}

Probab=95.97  E-value=0.03  Score=48.55  Aligned_cols=83  Identities=20%  Similarity=0.181  Sum_probs=51.1

Q ss_pred             CCCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHH----HHcCCCe-EEecCC-CcccHHHHHHHHHHHcC
Q 017916          180 GPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA----KELGADN-IVKVST-NLQDIAEEVEKIQKAMG  252 (364)
Q Consensus       180 ~~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~----~~lg~~~-~~~~~~-~~~~~~~~i~~~~~~~~  252 (364)
                      ..+.++||+|+ |++|.+.++.+...|+++++...++.++.+.+    ++.+... .+..|- ..+++.+.++.+.+.. 
T Consensus        24 ~~~k~vlITGas~gIG~a~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~-  102 (272)
T 4e3z_A           24 SDTPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITESGGEAVAIPGDVGNAADIAAMFSAVDRQF-  102 (272)
T ss_dssp             CCSCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhC-
Confidence            45779999998 99999999999999996444446666554432    2233321 222222 2233344444443322 


Q ss_pred             CCccEEEECCC
Q 017916          253 TGIDVSFDCAG  263 (364)
Q Consensus       253 ~~~d~vid~~g  263 (364)
                      +++|++|+++|
T Consensus       103 g~id~li~nAg  113 (272)
T 4e3z_A          103 GRLDGLVNNAG  113 (272)
T ss_dssp             SCCCEEEECCC
T ss_pred             CCCCEEEECCC
Confidence            47999999887

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}

Probab=95.97  E-value=0.034  Score=47.90  Aligned_cols=82  Identities=21%  Similarity=0.198  Sum_probs=50.6

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHH-HHc---CCC-eEEecCCC-cccHHHHHHHHHHHcCC
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KEL---GAD-NIVKVSTN-LQDIAEEVEKIQKAMGT  253 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~-~~l---g~~-~~~~~~~~-~~~~~~~i~~~~~~~~~  253 (364)
                      .+.++||+|+ |++|.+.++.+...|+ .|+.++++.++.+.+ +++   +.. ..+..|-. .+++.+.++.......+
T Consensus         4 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~g   82 (260)
T 2qq5_A            4 NGQVCVVTGASRGIGRGIALQLCKAGA-TVYITGRHLDTLRVVAQEAQSLGGQCVPVVCDSSQESEVRSLFEQVDREQQG   82 (260)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHSSEEEEEECCTTSHHHHHHHHHHHHHHHTT
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHcCCceEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence            4678999998 9999999999999999 577777776654432 222   432 12222221 23333333333222135


Q ss_pred             CccEEEECCC
Q 017916          254 GIDVSFDCAG  263 (364)
Q Consensus       254 ~~d~vid~~g  263 (364)
                      ++|++|+++|
T Consensus        83 ~id~lvnnAg   92 (260)
T 2qq5_A           83 RLDVLVNNAY   92 (260)
T ss_dssp             CCCEEEECCC
T ss_pred             CceEEEECCc
Confidence            7999999984

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0

Probab=95.97  E-value=0.069  Score=46.46  Aligned_cols=81  Identities=23%  Similarity=0.328  Sum_probs=50.4

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecC------------hhHHH----HHHHcCCCe-EEecCC-CcccHH
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVD------------DYRLS----VAKELGADN-IVKVST-NLQDIA  241 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~------------~~~~~----~~~~lg~~~-~~~~~~-~~~~~~  241 (364)
                      .+.++||+|+ +++|.+.++.+...|+ .|+.++++            .++.+    .++..+... .+..|- ..+++.
T Consensus         9 ~~k~~lVTGas~gIG~a~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~   87 (281)
T 3s55_A            9 EGKTALITGGARGMGRSHAVALAEAGA-DIAICDRCENSDVVGYPLATADDLAETVALVEKTGRRCISAKVDVKDRAALE   87 (281)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHH
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCCccccccccccccHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHH
Confidence            5789999998 9999999999999999 56777664            22222    233444332 222222 223344


Q ss_pred             HHHHHHHHHcCCCccEEEECCC
Q 017916          242 EEVEKIQKAMGTGIDVSFDCAG  263 (364)
Q Consensus       242 ~~i~~~~~~~~~~~d~vid~~g  263 (364)
                      +.++...+.. +++|++|+++|
T Consensus        88 ~~~~~~~~~~-g~id~lv~nAg  108 (281)
T 3s55_A           88 SFVAEAEDTL-GGIDIAITNAG  108 (281)
T ss_dssp             HHHHHHHHHH-TCCCEEEECCC
T ss_pred             HHHHHHHHhc-CCCCEEEECCC
Confidence            4444443333 47999999987

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*

Probab=95.95  E-value=0.048  Score=47.34  Aligned_cols=81  Identities=17%  Similarity=0.142  Sum_probs=49.8

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEec-ChhHHHHH-HHc----CCCe-EEecCCC-c----ccHHHHHHHH
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDV-DDYRLSVA-KEL----GADN-IVKVSTN-L----QDIAEEVEKI  247 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~-~~~~~~~~-~~l----g~~~-~~~~~~~-~----~~~~~~i~~~  247 (364)
                      .+.++||+|+ |.+|.+.++.+...|+ .|+.+++ +.++.+.+ +++    +... .+..+-. .    +++.+.++.+
T Consensus        10 ~~k~~lVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   88 (276)
T 1mxh_A           10 ECPAAVITGGARRIGHSIAVRLHQQGF-RVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCS   88 (276)
T ss_dssp             -CCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCChHHHHHHHHHHHHhcCCceEEEeccCCCccccHHHHHHHHHHH
Confidence            4678999998 9999999999988999 5677767 66554332 232    4322 2222222 2    2333333333


Q ss_pred             HHHcCCCccEEEECCC
Q 017916          248 QKAMGTGIDVSFDCAG  263 (364)
Q Consensus       248 ~~~~~~~~d~vid~~g  263 (364)
                      .... +++|++|+++|
T Consensus        89 ~~~~-g~id~lv~nAg  103 (276)
T 1mxh_A           89 FRAF-GRCDVLVNNAS  103 (276)
T ss_dssp             HHHH-SCCCEEEECCC
T ss_pred             HHhc-CCCCEEEECCC
Confidence            3322 47999999987

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...

Probab=95.95  E-value=0.037  Score=48.37  Aligned_cols=81  Identities=22%  Similarity=0.228  Sum_probs=50.5

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHH----HHcCCCe--EEecCCCc-ccHHHHHHHHHHHcC
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA----KELGADN--IVKVSTNL-QDIAEEVEKIQKAMG  252 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~----~~lg~~~--~~~~~~~~-~~~~~~i~~~~~~~~  252 (364)
                      .+.+|||+|+ |++|.+.++.+...|+ .|++++++.++.+.+    ++.+...  .+..+-.+ +++.+.++.+.+.. 
T Consensus        27 ~~k~vlITGasggIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~-  104 (286)
T 1xu9_A           27 QGKKVIVTGASKGIGREMAYHLAKMGA-HVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLM-  104 (286)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHHHHHHc-
Confidence            4679999998 9999999999988999 577777877665433    2234322  22222222 23333333332222 


Q ss_pred             CCccEEEEC-CC
Q 017916          253 TGIDVSFDC-AG  263 (364)
Q Consensus       253 ~~~d~vid~-~g  263 (364)
                      +++|++|++ .|
T Consensus       105 g~iD~li~naag  116 (286)
T 1xu9_A          105 GGLDMLILNHIT  116 (286)
T ss_dssp             TSCSEEEECCCC
T ss_pred             CCCCEEEECCcc
Confidence            479999988 44

>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*

Probab=95.94  E-value=0.03  Score=48.44  Aligned_cols=76  Identities=20%  Similarity=0.182  Sum_probs=48.2

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecC-CCcccHHHHHHHHHHHcCCCccEE
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVS-TNLQDIAEEVEKIQKAMGTGIDVS  258 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~-~~~~~~~~~i~~~~~~~~~~~d~v  258 (364)
                      +|.++||+|+ +++|.+.++.+...|+ .|+.++++.++     .+.-...+..+ ...++..+.++...+. -+++|++
T Consensus        10 ~GK~alVTGas~GIG~aia~~la~~Ga-~V~~~~r~~~~-----~~~~~~~~~~Dv~~~~~v~~~~~~~~~~-~G~iDil   82 (261)
T 4h15_A           10 RGKRALITAGTKGAGAATVSLFLELGA-QVLTTARARPE-----GLPEELFVEADLTTKEGCAIVAEATRQR-LGGVDVI   82 (261)
T ss_dssp             TTCEEEESCCSSHHHHHHHHHHHHTTC-EEEEEESSCCT-----TSCTTTEEECCTTSHHHHHHHHHHHHHH-TSSCSEE
T ss_pred             CCCEEEEeccCcHHHHHHHHHHHHcCC-EEEEEECCchh-----CCCcEEEEEcCCCCHHHHHHHHHHHHHH-cCCCCEE
Confidence            6889999998 9999999999999999 56666665432     11111122222 2223444444444333 3579999


Q ss_pred             EECCC
Q 017916          259 FDCAG  263 (364)
Q Consensus       259 id~~g  263 (364)
                      ++++|
T Consensus        83 VnnAG   87 (261)
T 4h15_A           83 VHMLG   87 (261)
T ss_dssp             EECCC
T ss_pred             EECCC
Confidence            99876

>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}

Probab=95.93  E-value=0.14  Score=42.88  Aligned_cols=104  Identities=14%  Similarity=0.201  Sum_probs=67.7

Q ss_pred             HHcCCCCCCEEEEEcCCHHHHHHHHHHHHCC-CCEEEEEecChhHHHHHHH----cCCC--eEEecCCCcccHHHHHHHH
Q 017916          175 RRANIGPETNVLIMGAGPIGLVTMLGARAFG-APRIVIVDVDDYRLSVAKE----LGAD--NIVKVSTNLQDIAEEVEKI  247 (364)
Q Consensus       175 ~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g-~~~vv~~~~~~~~~~~~~~----lg~~--~~~~~~~~~~~~~~~i~~~  247 (364)
                      ...+.+++.+||-.|+|. |..++.+|+.++ ...+++++.+++..+.+++    .|..  .+....   .+..+.+..+
T Consensus        50 ~~~~~~~~~~vLdiG~G~-G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~~i~~~~---gda~~~l~~~  125 (221)
T 3dr5_A           50 ATTNGNGSTGAIAITPAA-GLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREAGYSPSRVRFLL---SRPLDVMSRL  125 (221)
T ss_dssp             HHSCCTTCCEEEEESTTH-HHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEEC---SCHHHHGGGS
T ss_pred             HhhCCCCCCCEEEEcCCc-hHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcCcEEEEE---cCHHHHHHHh
Confidence            334555667999888765 888899999873 2379999999988776654    4543  222111   2222222111


Q ss_pred             HHHcCCCccEEEECCCC---HHHHHHHHHhcccCCEEEEEc
Q 017916          248 QKAMGTGIDVSFDCAGF---NKTMSTALSATRAGGKVCLVG  285 (364)
Q Consensus       248 ~~~~~~~~d~vid~~g~---~~~~~~~~~~l~~~G~~v~~g  285 (364)
                         ..+.||+||-....   .+.+..+++.|+|||.++.-+
T Consensus       126 ---~~~~fD~V~~d~~~~~~~~~l~~~~~~LkpGG~lv~dn  163 (221)
T 3dr5_A          126 ---ANDSYQLVFGQVSPMDLKALVDAAWPLLRRGGALVLAD  163 (221)
T ss_dssp             ---CTTCEEEEEECCCTTTHHHHHHHHHHHEEEEEEEEETT
T ss_pred             ---cCCCcCeEEEcCcHHHHHHHHHHHHHHcCCCcEEEEeC
Confidence               14679999854332   356788999999999998754

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}

Probab=95.92  E-value=0.028  Score=48.75  Aligned_cols=79  Identities=25%  Similarity=0.382  Sum_probs=49.6

Q ss_pred             CCCCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCC-CcccHHHHHHHHHHHcCCCcc
Q 017916          179 IGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVST-NLQDIAEEVEKIQKAMGTGID  256 (364)
Q Consensus       179 ~~~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~-~~~~~~~~i~~~~~~~~~~~d  256 (364)
                      -..+.+|||+|+ +++|.+.++.+...|+ .|+.++++.++..     +....+..+- ..+++.+.++.+.+.. +++|
T Consensus        11 ~~~~k~vlVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~-----~~~~~~~~Dv~~~~~v~~~~~~~~~~~-g~iD   83 (269)
T 3vtz_A           11 EFTDKVAIVTGGSSGIGLAVVDALVRYGA-KVVSVSLDEKSDV-----NVSDHFKIDVTNEEEVKEAVEKTTKKY-GRID   83 (269)
T ss_dssp             TTTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCC--CT-----TSSEEEECCTTCHHHHHHHHHHHHHHH-SCCC
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCchhcc-----CceeEEEecCCCHHHHHHHHHHHHHHc-CCCC
Confidence            356889999998 9999999999989999 5677766654321     1222222222 2233444444443332 4799


Q ss_pred             EEEECCCC
Q 017916          257 VSFDCAGF  264 (364)
Q Consensus       257 ~vid~~g~  264 (364)
                      ++|+++|.
T Consensus        84 ~lv~nAg~   91 (269)
T 3vtz_A           84 ILVNNAGI   91 (269)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCc
Confidence            99999873

>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A

Probab=95.92  E-value=0.038  Score=47.89  Aligned_cols=82  Identities=23%  Similarity=0.289  Sum_probs=50.6

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEec-ChhHHHH----HHHcCCCe-EEecCCC-cccHHHHHHHHHHHcC
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDV-DDYRLSV----AKELGADN-IVKVSTN-LQDIAEEVEKIQKAMG  252 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~-~~~~~~~----~~~lg~~~-~~~~~~~-~~~~~~~i~~~~~~~~  252 (364)
                      .+.+|||+|+ +++|.+.++.+...|++ |+.+.+ +.+..+.    +++.+... ++..+-. .+++.+.++.+... .
T Consensus        28 ~~k~vlITGas~gIG~~la~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~-~  105 (271)
T 4iin_A           28 TGKNVLITGASKGIGAEIAKTLASMGLK-VWINYRSNAEVADALKNELEEKGYKAAVIKFDAASESDFIEAIQTIVQS-D  105 (271)
T ss_dssp             SCCEEEETTCSSHHHHHHHHHHHHTTCE-EEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH-H
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCE-EEEEeCCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHh-c
Confidence            5789999998 99999999999899994 666655 4443332    23344332 2322222 23334444444332 2


Q ss_pred             CCccEEEECCCC
Q 017916          253 TGIDVSFDCAGF  264 (364)
Q Consensus       253 ~~~d~vid~~g~  264 (364)
                      +++|++|+++|.
T Consensus       106 g~id~li~nAg~  117 (271)
T 4iin_A          106 GGLSYLVNNAGV  117 (271)
T ss_dssp             SSCCEEEECCCC
T ss_pred             CCCCEEEECCCc
Confidence            479999999884

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2

Probab=95.91  E-value=0.042  Score=47.56  Aligned_cols=83  Identities=18%  Similarity=0.324  Sum_probs=52.4

Q ss_pred             CCCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHH-HHHc----CCCe-EEecCC-CcccHHHHHHHHHHHc
Q 017916          180 GPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSV-AKEL----GADN-IVKVST-NLQDIAEEVEKIQKAM  251 (364)
Q Consensus       180 ~~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~-~~~l----g~~~-~~~~~~-~~~~~~~~i~~~~~~~  251 (364)
                      -.+.++||+|+ |.+|.+.++.+...|+ .|+.++++.++.+. .+++    +... .+..+- ..+++.+.++.+....
T Consensus        19 l~~k~~lVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   97 (267)
T 1vl8_A           19 LRGRVALVTGGSRGLGFGIAQGLAEAGC-SVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEKF   97 (267)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            35789999998 9999999999999999 57777777665433 2223    5332 222222 2233334444433322


Q ss_pred             CCCccEEEECCCC
Q 017916          252 GTGIDVSFDCAGF  264 (364)
Q Consensus       252 ~~~~d~vid~~g~  264 (364)
                       +++|++|+++|.
T Consensus        98 -g~iD~lvnnAg~  109 (267)
T 1vl8_A           98 -GKLDTVVNAAGI  109 (267)
T ss_dssp             -SCCCEEEECCCC
T ss_pred             -CCCCEEEECCCc
Confidence             479999999873

>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A

Probab=95.90  E-value=0.048  Score=47.46  Aligned_cols=106  Identities=20%  Similarity=0.251  Sum_probs=66.8

Q ss_pred             HcCCCCCCEEEEEcCCHHHHHHHHHHHHC-CCCEEEEEecChhHHHHHHH----cCCCeEEecCCCcccHHHHHHHHHHH
Q 017916          176 RANIGPETNVLIMGAGPIGLVTMLGARAF-GAPRIVIVDVDDYRLSVAKE----LGADNIVKVSTNLQDIAEEVEKIQKA  250 (364)
Q Consensus       176 ~~~~~~g~~VLI~Gag~~G~~ai~la~~~-g~~~vv~~~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~i~~~~~~  250 (364)
                      ...+++|++||=.|+|. |..+.++++.+ +...|++++.++++.+.+++    +|...+....   .|..+....+. .
T Consensus        78 ~l~~~~g~~VLDlgaG~-G~~t~~la~~~~~~~~v~avD~~~~~l~~~~~~~~~~g~~~v~~~~---~D~~~~~~~~~-~  152 (274)
T 3ajd_A           78 VLNPREDDFILDMCAAP-GGKTTHLAQLMKNKGTIVAVEISKTRTKALKSNINRMGVLNTIIIN---ADMRKYKDYLL-K  152 (274)
T ss_dssp             HHCCCTTCEEEETTCTT-CHHHHHHHHHTTTCSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEE---SCHHHHHHHHH-H
T ss_pred             HhCCCCcCEEEEeCCCc-cHHHHHHHHHcCCCCEEEEECCCHHHHHHHHHHHHHhCCCcEEEEe---CChHhcchhhh-h
Confidence            35678999998887654 55667777765 43589999999988776654    4654332221   23222211111 0


Q ss_pred             cCCCccEEE-E--CCCC---------------------HHHHHHHHHhcccCCEEEEEcC
Q 017916          251 MGTGIDVSF-D--CAGF---------------------NKTMSTALSATRAGGKVCLVGM  286 (364)
Q Consensus       251 ~~~~~d~vi-d--~~g~---------------------~~~~~~~~~~l~~~G~~v~~g~  286 (364)
                      ....+|+|+ |  |.|.                     ...+..+++.|+++|+++....
T Consensus       153 ~~~~fD~Vl~d~Pcs~~g~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~stc  212 (274)
T 3ajd_A          153 NEIFFDKILLDAPCSGNIIKDKNRNVSEEDIKYCSLRQKELIDIGIDLLKKDGELVYSTC  212 (274)
T ss_dssp             TTCCEEEEEEEECCC------------HHHHTGGGTCHHHHHHHHHHHEEEEEEEEEEES
T ss_pred             ccccCCEEEEcCCCCCCcccccCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEEC
Confidence            145799987 4  4432                     3567778889999999987643

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*

Probab=95.90  E-value=0.045  Score=46.70  Aligned_cols=82  Identities=18%  Similarity=0.266  Sum_probs=50.7

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHH-H---HcCCCe-EEecCCC-cccHHHHHHHHHHHcCC
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-K---ELGADN-IVKVSTN-LQDIAEEVEKIQKAMGT  253 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~-~---~lg~~~-~~~~~~~-~~~~~~~i~~~~~~~~~  253 (364)
                      .+.+|||+|+ |.+|...++.+...|+ .|++++++.++.+.+ +   ..+... .+..+-. .+++.+.++.+.+.. +
T Consensus        10 ~~~~vlVtGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~   87 (255)
T 1fmc_A           10 DGKCAIITGAGAGIGKEIAITFATAGA-SVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKL-G   87 (255)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHTTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH-S
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHhc-C
Confidence            4678999998 9999999999888999 577777776654322 2   234321 2222222 223333333332222 4


Q ss_pred             CccEEEECCCC
Q 017916          254 GIDVSFDCAGF  264 (364)
Q Consensus       254 ~~d~vid~~g~  264 (364)
                      ++|++|.++|.
T Consensus        88 ~~d~vi~~Ag~   98 (255)
T 1fmc_A           88 KVDILVNNAGG   98 (255)
T ss_dssp             SCCEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            79999998873

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*

Probab=95.90  E-value=0.064  Score=46.82  Aligned_cols=81  Identities=19%  Similarity=0.211  Sum_probs=49.7

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecC----------------hhHHHHH----HHcCCCe-EEecCC-Cc
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVD----------------DYRLSVA----KELGADN-IVKVST-NL  237 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~----------------~~~~~~~----~~lg~~~-~~~~~~-~~  237 (364)
                      .|.++||+|+ +++|.+.++.+...|+ .|+.++.+                .++.+.+    +..+... .+..|- ..
T Consensus        10 ~~k~~lVTGas~gIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~   88 (286)
T 3uve_A           10 EGKVAFVTGAARGQGRSHAVRLAQEGA-DIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNRRIVTAEVDVRDY   88 (286)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCH
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeccccccccccccccccCCHHHHHHHHHHHhhcCCceEEEEcCCCCH
Confidence            5789999998 9999999999999999 56666554                3333322    2233322 222222 22


Q ss_pred             ccHHHHHHHHHHHcCCCccEEEECCC
Q 017916          238 QDIAEEVEKIQKAMGTGIDVSFDCAG  263 (364)
Q Consensus       238 ~~~~~~i~~~~~~~~~~~d~vid~~g  263 (364)
                      +++.+.++.+.+.. +++|++|+++|
T Consensus        89 ~~v~~~~~~~~~~~-g~id~lv~nAg  113 (286)
T 3uve_A           89 DALKAAVDSGVEQL-GRLDIIVANAG  113 (286)
T ss_dssp             HHHHHHHHHHHHHH-SCCCEEEECCC
T ss_pred             HHHHHHHHHHHHHh-CCCCEEEECCc
Confidence            33444444443333 47999999987

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A

Probab=95.89  E-value=0.039  Score=47.36  Aligned_cols=80  Identities=21%  Similarity=0.275  Sum_probs=49.2

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHH---cCCCe-EEecCC-CcccHHHHHHHHHHHcCCC
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKE---LGADN-IVKVST-NLQDIAEEVEKIQKAMGTG  254 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~---lg~~~-~~~~~~-~~~~~~~~i~~~~~~~~~~  254 (364)
                      .+.++||+|+ |.+|.+.++.+...|+ .|++++++.+ .+..++   .+... .+..+- ..+++.+.++...+.. ++
T Consensus         3 ~~k~vlVTGas~giG~~ia~~l~~~G~-~V~~~~r~~~-~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~-g~   79 (255)
T 2q2v_A            3 KGKTALVTGSTSGIGLGIAQVLARAGA-NIVLNGFGDP-APALAEIARHGVKAVHHPADLSDVAQIEALFALAEREF-GG   79 (255)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEECSSCC-HHHHHHHHTTSCCEEEECCCTTSHHHHHHHHHHHHHHH-SS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCch-HHHHHHHHhcCCceEEEeCCCCCHHHHHHHHHHHHHHc-CC
Confidence            4678999998 9999999999989999 5666766554 222232   34322 222221 2233333444333322 47


Q ss_pred             ccEEEECCC
Q 017916          255 IDVSFDCAG  263 (364)
Q Consensus       255 ~d~vid~~g  263 (364)
                      +|++|+++|
T Consensus        80 id~lv~~Ag   88 (255)
T 2q2v_A           80 VDILVNNAG   88 (255)
T ss_dssp             CSEEEECCC
T ss_pred             CCEEEECCC
Confidence            999999987

>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21

Probab=95.89  E-value=0.06  Score=45.94  Aligned_cols=99  Identities=21%  Similarity=0.273  Sum_probs=68.8

Q ss_pred             HHHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHH----cCCC-e--EEecCCCcccHHHHHHH
Q 017916          174 CRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKE----LGAD-N--IVKVSTNLQDIAEEVEK  246 (364)
Q Consensus       174 l~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~----lg~~-~--~~~~~~~~~~~~~~i~~  246 (364)
                      +....++++++||-.|+|. |..+..+++..|. .+++++.+++..+.+++    .|.. .  +..-+.  .++.     
T Consensus        29 ~~~~~~~~~~~VLDiGcG~-G~~~~~la~~~~~-~v~gvD~s~~~l~~a~~~~~~~~~~~~v~~~~~d~--~~~~-----   99 (256)
T 1nkv_A           29 GRVLRMKPGTRILDLGSGS-GEMLCTWARDHGI-TGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDA--AGYV-----   99 (256)
T ss_dssp             HHHTCCCTTCEEEEETCTT-CHHHHHHHHHTCC-EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCC--TTCC-----
T ss_pred             HHhcCCCCCCEEEEECCCC-CHHHHHHHHhcCC-eEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECCh--HhCC-----
Confidence            3567789999999999866 7788899988887 78999999987776654    3432 1  121111  1110     


Q ss_pred             HHHHcCCCccEEEECC------CCHHHHHHHHHhcccCCEEEEEc
Q 017916          247 IQKAMGTGIDVSFDCA------GFNKTMSTALSATRAGGKVCLVG  285 (364)
Q Consensus       247 ~~~~~~~~~d~vid~~------g~~~~~~~~~~~l~~~G~~v~~g  285 (364)
                          ....+|+|+...      .....+..+.++|+|+|+++...
T Consensus       100 ----~~~~fD~V~~~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~  140 (256)
T 1nkv_A          100 ----ANEKCDVAACVGATWIAGGFAGAEELLAQSLKPGGIMLIGE  140 (256)
T ss_dssp             ----CSSCEEEEEEESCGGGTSSSHHHHHHHTTSEEEEEEEEEEE
T ss_pred             ----cCCCCCEEEECCChHhcCCHHHHHHHHHHHcCCCeEEEEec
Confidence                135799998521      23567888999999999998764

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}

Probab=95.88  E-value=0.068  Score=46.41  Aligned_cols=82  Identities=18%  Similarity=0.262  Sum_probs=50.8

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecC------------hhHHHH----HHHcCCCe-EEecCC-CcccHH
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVD------------DYRLSV----AKELGADN-IVKVST-NLQDIA  241 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~------------~~~~~~----~~~lg~~~-~~~~~~-~~~~~~  241 (364)
                      .|.++||+|+ +++|.+.++.+...|+ .|++++++            .++.+.    ++..+... .+..|- ..+++.
T Consensus        12 ~gk~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~   90 (278)
T 3sx2_A           12 TGKVAFITGAARGQGRAHAVRLAADGA-DIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRIVARQADVRDRESLS   90 (278)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-eEEEEecccccccccccccchHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHH
Confidence            5789999998 9999999999999999 56666654            333322    23344332 222222 223344


Q ss_pred             HHHHHHHHHcCCCccEEEECCCC
Q 017916          242 EEVEKIQKAMGTGIDVSFDCAGF  264 (364)
Q Consensus       242 ~~i~~~~~~~~~~~d~vid~~g~  264 (364)
                      +.++.+.+.. +++|++|+++|.
T Consensus        91 ~~~~~~~~~~-g~id~lv~nAg~  112 (278)
T 3sx2_A           91 AALQAGLDEL-GRLDIVVANAGI  112 (278)
T ss_dssp             HHHHHHHHHH-CCCCEEEECCCC
T ss_pred             HHHHHHHHHc-CCCCEEEECCCC
Confidence            4444443332 479999999884

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0

Probab=95.88  E-value=0.068  Score=46.51  Aligned_cols=83  Identities=20%  Similarity=0.195  Sum_probs=51.0

Q ss_pred             CCCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEec-------------ChhHHHHH----HHcCCCe-EEecCC-Cccc
Q 017916          180 GPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDV-------------DDYRLSVA----KELGADN-IVKVST-NLQD  239 (364)
Q Consensus       180 ~~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~-------------~~~~~~~~----~~lg~~~-~~~~~~-~~~~  239 (364)
                      -.|.++||+|+ +++|.+.++.+...|+ .|+++++             +.++.+.+    +..+... .+..|- ..++
T Consensus        13 l~gk~~lVTGas~gIG~a~a~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~   91 (280)
T 3pgx_A           13 LQGRVAFITGAARGQGRSHAVRLAAEGA-DIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRKALTRVLDVRDDAA   91 (280)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCHHH
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHH
Confidence            35789999998 9999999999999999 5666655             34443322    2334332 222222 2233


Q ss_pred             HHHHHHHHHHHcCCCccEEEECCCC
Q 017916          240 IAEEVEKIQKAMGTGIDVSFDCAGF  264 (364)
Q Consensus       240 ~~~~i~~~~~~~~~~~d~vid~~g~  264 (364)
                      +.+.+++..+.. +++|++|+++|.
T Consensus        92 v~~~~~~~~~~~-g~id~lvnnAg~  115 (280)
T 3pgx_A           92 LRELVADGMEQF-GRLDVVVANAGV  115 (280)
T ss_dssp             HHHHHHHHHHHH-CCCCEEEECCCC
T ss_pred             HHHHHHHHHHHc-CCCCEEEECCCC
Confidence            444444443332 479999999873

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}

Probab=95.88  E-value=0.044  Score=47.26  Aligned_cols=81  Identities=27%  Similarity=0.335  Sum_probs=51.4

Q ss_pred             CCCEEEEEcC-C-HHHHHHHHHHHHCCCCEEEEEecChhHHHHH-HHc---CCC--eEEecCC-CcccHHHHHHHHHHHc
Q 017916          181 PETNVLIMGA-G-PIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KEL---GAD--NIVKVST-NLQDIAEEVEKIQKAM  251 (364)
Q Consensus       181 ~g~~VLI~Ga-g-~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~-~~l---g~~--~~~~~~~-~~~~~~~~i~~~~~~~  251 (364)
                      .+.++||+|+ | ++|.+.++.+...|+ .|+.++++.++.+.+ +++   +..  ..+..|- ..+++.+.++.+.+..
T Consensus        21 ~~k~vlITGasg~GIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   99 (266)
T 3o38_A           21 KGKVVLVTAAAGTGIGSTTARRALLEGA-DVVISDYHERRLGETRDQLADLGLGRVEAVVCDVTSTEAVDALITQTVEKA   99 (266)
T ss_dssp             TTCEEEESSCSSSSHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTCSSCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCCchHHHHHHHHHHCCC-EEEEecCCHHHHHHHHHHHHhcCCCceEEEEeCCCCHHHHHHHHHHHHHHh
Confidence            5789999997 6 799999999888999 577777777664432 333   211  2222222 2233444444443332


Q ss_pred             CCCccEEEECCC
Q 017916          252 GTGIDVSFDCAG  263 (364)
Q Consensus       252 ~~~~d~vid~~g  263 (364)
                       +++|++|+++|
T Consensus       100 -g~id~li~~Ag  110 (266)
T 3o38_A          100 -GRLDVLVNNAG  110 (266)
T ss_dssp             -SCCCEEEECCC
T ss_pred             -CCCcEEEECCC
Confidence             47999999988

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}

Probab=95.88  E-value=0.044  Score=49.47  Aligned_cols=82  Identities=30%  Similarity=0.325  Sum_probs=51.8

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhH-----------HHHHHHcCCCe-EEecCC-CcccHHHHHHH
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYR-----------LSVAKELGADN-IVKVST-NLQDIAEEVEK  246 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~-----------~~~~~~lg~~~-~~~~~~-~~~~~~~~i~~  246 (364)
                      .|.++||+|+ +++|.+.++.+...|+ .|+.++++.++           .+.++..+... .+..|- ..+++.+.+++
T Consensus        44 ~gk~vlVTGas~GIG~aia~~La~~Ga-~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~  122 (346)
T 3kvo_A           44 AGCTVFITGASRGIGKAIALKAAKDGA-NIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCIVDVRDEQQISAAVEK  122 (346)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHTTTC-EEEEEESCCSCCSSSCCCHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCEEEEeCCChHHHHHHHHHHHHCCC-EEEEEECChhhhhhhHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHH
Confidence            5789999998 9999999999989999 56666665542           23334445332 222222 22334444444


Q ss_pred             HHHHcCCCccEEEECCCC
Q 017916          247 IQKAMGTGIDVSFDCAGF  264 (364)
Q Consensus       247 ~~~~~~~~~d~vid~~g~  264 (364)
                      +.+.. +++|++|+++|.
T Consensus       123 ~~~~~-g~iDilVnnAG~  139 (346)
T 3kvo_A          123 AIKKF-GGIDILVNNASA  139 (346)
T ss_dssp             HHHHH-SCCCEEEECCCC
T ss_pred             HHHHc-CCCCEEEECCCC
Confidence            43333 479999999883

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}

Probab=95.87  E-value=0.051  Score=46.28  Aligned_cols=82  Identities=22%  Similarity=0.369  Sum_probs=50.4

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEec-ChhHHHH-HH---HcCCCe-EEecCC-CcccHHHHHHHHHHHcC
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDV-DDYRLSV-AK---ELGADN-IVKVST-NLQDIAEEVEKIQKAMG  252 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~-~~~~~~~-~~---~lg~~~-~~~~~~-~~~~~~~~i~~~~~~~~  252 (364)
                      .+.++||+|+ |.+|.+.++.+...|+ .|+.+.+ +.++.+. .+   ..+... .+..|- ..+++.+.++.+.+.. 
T Consensus         3 ~~k~vlVTGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-   80 (246)
T 2uvd_A            3 KGKVALVTGASRGIGRAIAIDLAKQGA-NVVVNYAGNEQKANEVVDEIKKLGSDAIAVRADVANAEDVTNMVKQTVDVF-   80 (246)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc-
Confidence            4678999998 9999999999999999 4666656 5555432 22   234322 222222 2233444444443322 


Q ss_pred             CCccEEEECCCC
Q 017916          253 TGIDVSFDCAGF  264 (364)
Q Consensus       253 ~~~d~vid~~g~  264 (364)
                      +++|++|+++|.
T Consensus        81 g~id~lv~nAg~   92 (246)
T 2uvd_A           81 GQVDILVNNAGV   92 (246)
T ss_dssp             SCCCEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            479999999873

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2

Probab=95.87  E-value=0.065  Score=46.80  Aligned_cols=82  Identities=17%  Similarity=0.212  Sum_probs=50.3

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHH-HHHc---CCCe-EEecCC-CcccHHHHHHHHHHHcCC
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSV-AKEL---GADN-IVKVST-NLQDIAEEVEKIQKAMGT  253 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~-~~~l---g~~~-~~~~~~-~~~~~~~~i~~~~~~~~~  253 (364)
                      .+.+|||+|+ |.+|.+.++.+...|+ .|++++++.++.+. .+++   +... .+..|- ..+++.+.++.+.+. .+
T Consensus        43 ~~k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~-~~  120 (285)
T 2c07_A           43 ENKVALVTGAGRGIGREIAKMLAKSVS-HVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTE-HK  120 (285)
T ss_dssp             SSCEEEEESTTSHHHHHHHHHHTTTSS-EEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHH-CS
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHHHHhcCCceeEEECCCCCHHHHHHHHHHHHHh-cC
Confidence            4678999998 9999999998888899 45667666655443 2222   4332 222222 223333334333332 34


Q ss_pred             CccEEEECCCC
Q 017916          254 GIDVSFDCAGF  264 (364)
Q Consensus       254 ~~d~vid~~g~  264 (364)
                      ++|++|+++|.
T Consensus       121 ~id~li~~Ag~  131 (285)
T 2c07_A          121 NVDILVNNAGI  131 (285)
T ss_dssp             CCCEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            79999998873

>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}

Probab=95.84  E-value=0.092  Score=49.58  Aligned_cols=101  Identities=19%  Similarity=0.238  Sum_probs=66.4

Q ss_pred             cCCC--CCCEEEEEcCCHHHHHHHHHHHHCC-CCEEEEEecChhHHHHHH----HcCCCeEEecCCCcccHHHHHHHHHH
Q 017916          177 ANIG--PETNVLIMGAGPIGLVTMLGARAFG-APRIVIVDVDDYRLSVAK----ELGADNIVKVSTNLQDIAEEVEKIQK  249 (364)
Q Consensus       177 ~~~~--~g~~VLI~Gag~~G~~ai~la~~~g-~~~vv~~~~~~~~~~~~~----~lg~~~~~~~~~~~~~~~~~i~~~~~  249 (364)
                      ..++  +|++||=.|+|. |..++++|+.++ ...|++++.++++.+.++    .+|...+........++..       
T Consensus       111 L~~~~~~g~~VLDl~aGp-G~kt~~lA~~~~~~g~V~avDis~~~l~~~~~n~~r~g~~nv~~~~~D~~~~~~-------  182 (479)
T 2frx_A          111 LFADGNAPQRVMDVAAAP-GSKTTQISARMNNEGAILANEFSASRVKVLHANISRCGISNVALTHFDGRVFGA-------  182 (479)
T ss_dssp             HTTTTCCCSEEEESSCTT-SHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHHHHHTCCSEEEECCCSTTHHH-------
T ss_pred             hCcccCCCCEEEEeCCCC-CHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCCHHHhhh-------
Confidence            3445  999999887654 567778888764 347999999999887665    3576543322222222211       


Q ss_pred             HcCCCccEEEE---CCCCH-------------------------HHHHHHHHhcccCCEEEEEc
Q 017916          250 AMGTGIDVSFD---CAGFN-------------------------KTMSTALSATRAGGKVCLVG  285 (364)
Q Consensus       250 ~~~~~~d~vid---~~g~~-------------------------~~~~~~~~~l~~~G~~v~~g  285 (364)
                      .....||.|+-   |+|.+                         ..+..+++.|++||+++...
T Consensus       183 ~~~~~fD~Il~D~PcSg~G~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~LvysT  246 (479)
T 2frx_A          183 AVPEMFDAILLDAPCSGEGVVRKDPDALKNWSPESNQEIAATQRELIDSAFHALRPGGTLVYST  246 (479)
T ss_dssp             HSTTCEEEEEEECCCCCGGGGGTCTTSSSSCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             hccccCCEEEECCCcCCcccccCCHHHHhhcCHhHHHHHHHHHHHHHHHHHHhcCCCCEEEEec
Confidence            12457999875   55531                         35667889999999998764

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}

Probab=95.84  E-value=0.083  Score=46.51  Aligned_cols=81  Identities=20%  Similarity=0.247  Sum_probs=49.9

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecC------------hhHHH----HHHHcCCCe-EEecCC-CcccHH
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVD------------DYRLS----VAKELGADN-IVKVST-NLQDIA  241 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~------------~~~~~----~~~~lg~~~-~~~~~~-~~~~~~  241 (364)
                      .|.++||+|+ +++|.+.++.+...|+ .|++++.+            .++.+    .++..+... .+..|- ..+++.
T Consensus        27 ~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~  105 (299)
T 3t7c_A           27 EGKVAFITGAARGQGRSHAITLAREGA-DIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRRIIASQVDVRDFDAMQ  105 (299)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEecccccccccccccCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHH
Confidence            5789999998 9999999999999999 56666554            33322    223444332 222222 223333


Q ss_pred             HHHHHHHHHcCCCccEEEECCC
Q 017916          242 EEVEKIQKAMGTGIDVSFDCAG  263 (364)
Q Consensus       242 ~~i~~~~~~~~~~~d~vid~~g  263 (364)
                      +.++.+.+.. +++|++|+++|
T Consensus       106 ~~~~~~~~~~-g~iD~lv~nAg  126 (299)
T 3t7c_A          106 AAVDDGVTQL-GRLDIVLANAA  126 (299)
T ss_dssp             HHHHHHHHHH-SCCCEEEECCC
T ss_pred             HHHHHHHHHh-CCCCEEEECCC
Confidence            4444443332 47999999887

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*

Probab=95.83  E-value=0.056  Score=46.44  Aligned_cols=81  Identities=16%  Similarity=0.142  Sum_probs=50.9

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHH-HHH---cCCCe-EEecCC-CcccHHHHHHHHHHHcCC
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSV-AKE---LGADN-IVKVST-NLQDIAEEVEKIQKAMGT  253 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~-~~~---lg~~~-~~~~~~-~~~~~~~~i~~~~~~~~~  253 (364)
                      .+.++||+|+ |.+|.+.++.+...|+ .|+.++++.++.+. .++   .+... .+..+- ..+++.+.++...... +
T Consensus        13 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-g   90 (260)
T 2zat_A           13 ENKVALVTASTDGIGLAIARRLAQDGA-HVVVSSRKQENVDRTVATLQGEGLSVTGTVCHVGKAEDRERLVAMAVNLH-G   90 (260)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH-S
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHc-C
Confidence            4789999998 9999999999999999 57777777665432 222   24322 222221 1233333343333322 4


Q ss_pred             CccEEEECCC
Q 017916          254 GIDVSFDCAG  263 (364)
Q Consensus       254 ~~d~vid~~g  263 (364)
                      ++|++|+++|
T Consensus        91 ~iD~lv~~Ag  100 (260)
T 2zat_A           91 GVDILVSNAA  100 (260)
T ss_dssp             CCCEEEECCC
T ss_pred             CCCEEEECCC
Confidence            7999999887

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}

Probab=95.83  E-value=0.063  Score=46.79  Aligned_cols=83  Identities=22%  Similarity=0.298  Sum_probs=51.9

Q ss_pred             CCCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEec-ChhHHHH----HHHcCCCe-EEecC-CCcccHHHHHHHHHHHc
Q 017916          180 GPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDV-DDYRLSV----AKELGADN-IVKVS-TNLQDIAEEVEKIQKAM  251 (364)
Q Consensus       180 ~~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~-~~~~~~~----~~~lg~~~-~~~~~-~~~~~~~~~i~~~~~~~  251 (364)
                      ..+.++||+|+ +++|.+.++.+...|+ .|++++. +.++.+.    ++..+... .+..| ...+++.+.++.+.+..
T Consensus        27 ~~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  105 (280)
T 4da9_A           27 KARPVAIVTGGRRGIGLGIARALAASGF-DIAITGIGDAEGVAPVIAELSGLGARVIFLRADLADLSSHQATVDAVVAEF  105 (280)
T ss_dssp             CCCCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCCHHHHHHHHHHHHHTTCCEEEEECCTTSGGGHHHHHHHHHHHH
T ss_pred             cCCCEEEEecCCCHHHHHHHHHHHHCCC-eEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHc
Confidence            35789999998 9999999999999999 4566653 5444332    22334332 22222 22345555555554433


Q ss_pred             CCCccEEEECCCC
Q 017916          252 GTGIDVSFDCAGF  264 (364)
Q Consensus       252 ~~~~d~vid~~g~  264 (364)
                       +++|++|+++|.
T Consensus       106 -g~iD~lvnnAg~  117 (280)
T 4da9_A          106 -GRIDCLVNNAGI  117 (280)
T ss_dssp             -SCCCEEEEECC-
T ss_pred             -CCCCEEEECCCc
Confidence             479999999884

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*

Probab=95.83  E-value=0.061  Score=46.86  Aligned_cols=83  Identities=18%  Similarity=0.224  Sum_probs=51.2

Q ss_pred             CCCCEEEEEcC-CH--HHHHHHHHHHHCCCCEEEEEecCh--hHHHHH-HHcCCCeEEecCCCc-ccHHHHHHHHHHHcC
Q 017916          180 GPETNVLIMGA-GP--IGLVTMLGARAFGAPRIVIVDVDD--YRLSVA-KELGADNIVKVSTNL-QDIAEEVEKIQKAMG  252 (364)
Q Consensus       180 ~~g~~VLI~Ga-g~--~G~~ai~la~~~g~~~vv~~~~~~--~~~~~~-~~lg~~~~~~~~~~~-~~~~~~i~~~~~~~~  252 (364)
                      -.+.++||+|+ |.  +|.+.++.+...|+ .|+.++++.  ++.+.+ ++.+-...+..|-.+ +++.+.++.+.+. -
T Consensus        24 l~~k~vlVTGasg~~GIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~-~  101 (280)
T 3nrc_A           24 LAGKKILITGLLSNKSIAYGIAKAMHREGA-ELAFTYVGQFKDRVEKLCAEFNPAAVLPCDVISDQEIKDLFVELGKV-W  101 (280)
T ss_dssp             TTTCEEEECCCCSTTCHHHHHHHHHHHTTC-EEEEEECTTCHHHHHHHHGGGCCSEEEECCTTCHHHHHHHHHHHHHH-C
T ss_pred             cCCCEEEEECCCCCCCHHHHHHHHHHHcCC-EEEEeeCchHHHHHHHHHHhcCCceEEEeecCCHHHHHHHHHHHHHH-c
Confidence            35789999985 44  99999998888999 567776665  444433 334433333333222 3333344444332 3


Q ss_pred             CCccEEEECCCC
Q 017916          253 TGIDVSFDCAGF  264 (364)
Q Consensus       253 ~~~d~vid~~g~  264 (364)
                      +++|++|+++|.
T Consensus       102 g~id~li~nAg~  113 (280)
T 3nrc_A          102 DGLDAIVHSIAF  113 (280)
T ss_dssp             SSCCEEEECCCC
T ss_pred             CCCCEEEECCcc
Confidence            579999999873

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*

Probab=95.83  E-value=0.047  Score=46.96  Aligned_cols=81  Identities=23%  Similarity=0.277  Sum_probs=50.3

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhH-HH-HHHHc----CCCe-EEecCC-CcccHHHHHHHHHHHc
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYR-LS-VAKEL----GADN-IVKVST-NLQDIAEEVEKIQKAM  251 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~-~~-~~~~l----g~~~-~~~~~~-~~~~~~~~i~~~~~~~  251 (364)
                      .+.++||+|+ |.+|.+.++.+...|+ .|+.++++.++ .+ ..+++    +... .+..+- ..+++.+.++.+.+..
T Consensus         3 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   81 (260)
T 1x1t_A            3 KGKVAVVTGSTSGIGLGIATALAAQGA-DIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQM   81 (260)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHcCC-EEEEEeCCcchHHHHHHHHHHhccCCcEEEEECCCCCHHHHHHHHHHHHHhc
Confidence            4678999998 9999999999999999 56777766655 33 22322    4332 222221 1233333444333322


Q ss_pred             CCCccEEEECCC
Q 017916          252 GTGIDVSFDCAG  263 (364)
Q Consensus       252 ~~~~d~vid~~g  263 (364)
                       +++|++|+++|
T Consensus        82 -g~iD~lv~~Ag   92 (260)
T 1x1t_A           82 -GRIDILVNNAG   92 (260)
T ss_dssp             -SCCSEEEECCC
T ss_pred             -CCCCEEEECCC
Confidence             47999999987

>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*

Probab=95.82  E-value=0.046  Score=47.23  Aligned_cols=83  Identities=18%  Similarity=0.084  Sum_probs=50.0

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHH-HHH---HcCCC-eEEecCCC-cccHHHHHHHHHHHcCC
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLS-VAK---ELGAD-NIVKVSTN-LQDIAEEVEKIQKAMGT  253 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~-~~~---~lg~~-~~~~~~~~-~~~~~~~i~~~~~~~~~  253 (364)
                      .+.+|||+|+ +++|.+.++.+...|+++++...++.++.+ .++   ..+.. ..+..|-. .+++.+.++.+... .+
T Consensus        25 ~~k~vlVTGas~gIG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-~g  103 (267)
T 4iiu_A           25 MSRSVLVTGASKGIGRAIARQLAADGFNIGVHYHRDAAGAQETLNAIVANGGNGRLLSFDVANREQCREVLEHEIAQ-HG  103 (267)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH-HC
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHH-hC
Confidence            3578999998 999999999999999965455555554433 222   23322 22222222 23333334433332 24


Q ss_pred             CccEEEECCCC
Q 017916          254 GIDVSFDCAGF  264 (364)
Q Consensus       254 ~~d~vid~~g~  264 (364)
                      ++|++|+++|.
T Consensus       104 ~id~li~nAg~  114 (267)
T 4iiu_A          104 AWYGVVSNAGI  114 (267)
T ss_dssp             CCSEEEECCCC
T ss_pred             CccEEEECCCC
Confidence            79999999873

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2

Probab=95.82  E-value=0.074  Score=46.78  Aligned_cols=81  Identities=20%  Similarity=0.260  Sum_probs=50.6

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHH-HHc--------CCC-eEEecCC-CcccHHHHHHHHH
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KEL--------GAD-NIVKVST-NLQDIAEEVEKIQ  248 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~-~~l--------g~~-~~~~~~~-~~~~~~~~i~~~~  248 (364)
                      .+.+|||+|+ |.+|.+.++.+...|+ .|+.++++.++.+.+ +++        +.. ..+..+- ..+++.+.++.+.
T Consensus        17 ~~k~vlVTGasggIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~   95 (303)
T 1yxm_A           17 QGQVAIVTGGATGIGKAIVKELLELGS-NVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKSTL   95 (303)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCCCHHHHHHHHHHHH
Confidence            4679999998 9999999999989999 577777776654432 222        222 1222221 1233333344333


Q ss_pred             HHcCCCccEEEECCC
Q 017916          249 KAMGTGIDVSFDCAG  263 (364)
Q Consensus       249 ~~~~~~~d~vid~~g  263 (364)
                      ... +++|++|+++|
T Consensus        96 ~~~-g~id~li~~Ag  109 (303)
T 1yxm_A           96 DTF-GKINFLVNNGG  109 (303)
T ss_dssp             HHH-SCCCEEEECCC
T ss_pred             HHc-CCCCEEEECCC
Confidence            322 37999999987

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A

Probab=95.82  E-value=0.048  Score=51.23  Aligned_cols=82  Identities=22%  Similarity=0.300  Sum_probs=53.2

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhH---HHHHHHcCCCeEEecC-CCcccHHHHHHHHHHHcCCCc
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYR---LSVAKELGADNIVKVS-TNLQDIAEEVEKIQKAMGTGI  255 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~---~~~~~~lg~~~~~~~~-~~~~~~~~~i~~~~~~~~~~~  255 (364)
                      ++.++||+|+ |++|.+.++.+...|+ .|+.++++...   .+..++++... +..+ ...++..+.+..+.+..+.++
T Consensus       212 ~gk~~LVTGgsgGIG~aiA~~La~~Ga-~Vvl~~r~~~~~~l~~~~~~~~~~~-~~~Dvtd~~~v~~~~~~~~~~~g~~i  289 (454)
T 3u0b_A          212 DGKVAVVTGAARGIGATIAEVFARDGA-TVVAIDVDGAAEDLKRVADKVGGTA-LTLDVTADDAVDKITAHVTEHHGGKV  289 (454)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEECGGGHHHHHHHHHHHTCEE-EECCTTSTTHHHHHHHHHHHHSTTCC
T ss_pred             CCCEEEEeCCchHHHHHHHHHHHHCCC-EEEEEeCCccHHHHHHHHHHcCCeE-EEEecCCHHHHHHHHHHHHHHcCCCc
Confidence            5678999987 9999999988888899 56666654332   23344556542 2222 223444555555544444459


Q ss_pred             cEEEECCCC
Q 017916          256 DVSFDCAGF  264 (364)
Q Consensus       256 d~vid~~g~  264 (364)
                      |++|+++|.
T Consensus       290 d~lV~nAGv  298 (454)
T 3u0b_A          290 DILVNNAGI  298 (454)
T ss_dssp             SEEEECCCC
T ss_pred             eEEEECCcc
Confidence            999999874

>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*

Probab=95.80  E-value=0.049  Score=47.59  Aligned_cols=95  Identities=19%  Similarity=0.270  Sum_probs=63.7

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHH-c----CC---------CeEEecCCCcccHHHHHH
Q 017916          180 GPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKE-L----GA---------DNIVKVSTNLQDIAEEVE  245 (364)
Q Consensus       180 ~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~-l----g~---------~~~~~~~~~~~~~~~~i~  245 (364)
                      .++.+||+.|+|. |..+..+++. +...+++++.+++..+.+++ +    +.         ..+...   ..|..+.+.
T Consensus        74 ~~~~~VLdiG~G~-G~~~~~l~~~-~~~~v~~vDid~~~i~~ar~~~~~~~~l~~~~~~~~~~~v~~~---~~D~~~~l~  148 (281)
T 1mjf_A           74 PKPKRVLVIGGGD-GGTVREVLQH-DVDEVIMVEIDEDVIMVSKDLIKIDNGLLEAMLNGKHEKAKLT---IGDGFEFIK  148 (281)
T ss_dssp             SCCCEEEEEECTT-SHHHHHHTTS-CCSEEEEEESCHHHHHHHHHHTCTTTTHHHHHHTTCCSSEEEE---ESCHHHHHH
T ss_pred             CCCCeEEEEcCCc-CHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHHhhccccccccccCCCCcEEEE---ECchHHHhc
Confidence            4568999998754 6677777777 77789999999998888875 3    21         111111   123222222


Q ss_pred             HHHHHcCCCccEEE-ECCC---------CHHHHHHHHHhcccCCEEEEE
Q 017916          246 KIQKAMGTGIDVSF-DCAG---------FNKTMSTALSATRAGGKVCLV  284 (364)
Q Consensus       246 ~~~~~~~~~~d~vi-d~~g---------~~~~~~~~~~~l~~~G~~v~~  284 (364)
                          . .+.+|+|+ |...         ..+.+..+.+.|+|+|.++..
T Consensus       149 ----~-~~~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~  192 (281)
T 1mjf_A          149 ----N-NRGFDVIIADSTDPVGPAKVLFSEEFYRYVYDALNNPGIYVTQ  192 (281)
T ss_dssp             ----H-CCCEEEEEEECCCCC-----TTSHHHHHHHHHHEEEEEEEEEE
T ss_pred             ----c-cCCeeEEEECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEE
Confidence                2 46799987 4331         256788999999999999875

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2

Probab=95.80  E-value=0.066  Score=46.15  Aligned_cols=83  Identities=14%  Similarity=0.153  Sum_probs=52.0

Q ss_pred             CCCCCEEEEEcC---CHHHHHHHHHHHHCCCCEEEEEecChhHHHHH----HHcCCCeEEecCCC-cccHHHHHHHHHHH
Q 017916          179 IGPETNVLIMGA---GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA----KELGADNIVKVSTN-LQDIAEEVEKIQKA  250 (364)
Q Consensus       179 ~~~g~~VLI~Ga---g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~----~~lg~~~~~~~~~~-~~~~~~~i~~~~~~  250 (364)
                      ..++.+|||+|+   +++|.+.++.+...|+ .|+.++++++..+.+    ++.+-...+..|-. .+++.+.++.+.+.
T Consensus        11 ~~~~k~vlITGa~~~~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   89 (271)
T 3ek2_A           11 FLDGKRILLTGLLSNRSIAYGIAKACKREGA-ELAFTYVGDRFKDRITEFAAEFGSELVFPCDVADDAQIDALFASLKTH   89 (271)
T ss_dssp             TTTTCEEEECCCCSTTSHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEeCCCCCCcHHHHHHHHHHHcCC-CEEEEecchhhHHHHHHHHHHcCCcEEEECCCCCHHHHHHHHHHHHHH
Confidence            356889999984   6899999999888999 566776665433333    33443333333322 23344444444333


Q ss_pred             cCCCccEEEECCC
Q 017916          251 MGTGIDVSFDCAG  263 (364)
Q Consensus       251 ~~~~~d~vid~~g  263 (364)
                       .+++|++|+++|
T Consensus        90 -~g~id~lv~nAg  101 (271)
T 3ek2_A           90 -WDSLDGLVHSIG  101 (271)
T ss_dssp             -CSCEEEEEECCC
T ss_pred             -cCCCCEEEECCc
Confidence             357999999887

>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*

Probab=95.78  E-value=0.085  Score=48.81  Aligned_cols=96  Identities=17%  Similarity=0.164  Sum_probs=66.9

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcCCCccEEEE
Q 017916          181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  260 (364)
Q Consensus       181 ~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid  260 (364)
                      .+++|+|.|.|.+|+.+++.++..|. .|++++.++++.+.+++.|...+.- +..+.+   .+++   ..-..+|++|-
T Consensus         3 ~~~~viIiG~Gr~G~~va~~L~~~g~-~vvvId~d~~~v~~~~~~g~~vi~G-Dat~~~---~L~~---agi~~A~~viv   74 (413)
T 3l9w_A            3 HGMRVIIAGFGRFGQITGRLLLSSGV-KMVVLDHDPDHIETLRKFGMKVFYG-DATRMD---LLES---AGAAKAEVLIN   74 (413)
T ss_dssp             -CCSEEEECCSHHHHHHHHHHHHTTC-CEEEEECCHHHHHHHHHTTCCCEES-CTTCHH---HHHH---TTTTTCSEEEE
T ss_pred             CCCeEEEECCCHHHHHHHHHHHHCCC-CEEEEECCHHHHHHHHhCCCeEEEc-CCCCHH---HHHh---cCCCccCEEEE
Confidence            45789999999999999999999999 5888999999999999888764332 222222   2222   22357999999


Q ss_pred             CCCCHHHHH---HHHHhcccCCEEEEE
Q 017916          261 CAGFNKTMS---TALSATRAGGKVCLV  284 (364)
Q Consensus       261 ~~g~~~~~~---~~~~~l~~~G~~v~~  284 (364)
                      ++++.+.-.   ...+.+.+.-+++.-
T Consensus        75 ~~~~~~~n~~i~~~ar~~~p~~~Iiar  101 (413)
T 3l9w_A           75 AIDDPQTNLQLTEMVKEHFPHLQIIAR  101 (413)
T ss_dssp             CCSSHHHHHHHHHHHHHHCTTCEEEEE
T ss_pred             CCCChHHHHHHHHHHHHhCCCCeEEEE
Confidence            999654322   334455566666653

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}

Probab=95.77  E-value=0.026  Score=48.28  Aligned_cols=84  Identities=15%  Similarity=0.164  Sum_probs=47.6

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHH-HHH---HcCCCe-EEecCCC-cccHHHHHHHHHHHc--
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLS-VAK---ELGADN-IVKVSTN-LQDIAEEVEKIQKAM--  251 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~-~~~---~lg~~~-~~~~~~~-~~~~~~~i~~~~~~~--  251 (364)
                      .+.++||+|+ +++|.+.++.+...|+++++...++.++.+ ..+   ..+... .+..+-. ..+..+.++.+....  
T Consensus         6 ~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   85 (255)
T 3icc_A            6 KGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQN   85 (255)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCSHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhcCCceEEEecCcCCHHHHHHHHHHHHHHhcc
Confidence            5789999998 999999999999999954444455554433 222   233221 2222211 122222222222211  


Q ss_pred             ---CCCccEEEECCCC
Q 017916          252 ---GTGIDVSFDCAGF  264 (364)
Q Consensus       252 ---~~~~d~vid~~g~  264 (364)
                         ..++|++|+++|.
T Consensus        86 ~~~~~~id~lv~nAg~  101 (255)
T 3icc_A           86 RTGSTKFDILINNAGI  101 (255)
T ss_dssp             HHSSSCEEEEEECCCC
T ss_pred             cccCCcccEEEECCCC
Confidence               1359999999873

>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13

Probab=95.77  E-value=0.035  Score=48.33  Aligned_cols=101  Identities=20%  Similarity=0.235  Sum_probs=67.8

Q ss_pred             HHcCCCCCCEEEEEcCCHHHHHHHHHHHHC-CCCEEEEEecChhHHHHHHHc-----CCCeEEecCCCcccHHHHHHHHH
Q 017916          175 RRANIGPETNVLIMGAGPIGLVTMLGARAF-GAPRIVIVDVDDYRLSVAKEL-----GADNIVKVSTNLQDIAEEVEKIQ  248 (364)
Q Consensus       175 ~~~~~~~g~~VLI~Gag~~G~~ai~la~~~-g~~~vv~~~~~~~~~~~~~~l-----g~~~~~~~~~~~~~~~~~i~~~~  248 (364)
                      ....++++++||-.|+|. |..+..+++.. ....+++++.+++..+.+++.     |...+.....   ++.+.   + 
T Consensus       104 ~~~~~~~~~~VLD~G~G~-G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~g~~~v~~~~~---d~~~~---~-  175 (275)
T 1yb2_A          104 MRCGLRPGMDILEVGVGS-GNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDIGNVRTSRS---DIADF---I-  175 (275)
T ss_dssp             --CCCCTTCEEEEECCTT-SHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCCTTEEEECS---CTTTC---C-
T ss_pred             HHcCCCCcCEEEEecCCC-CHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhcCCCCcEEEEEC---chhcc---C-
Confidence            557789999999998763 77788888873 334899999999888777653     5332221111   11110   0 


Q ss_pred             HHcCCCccEEEECCCCH-HHHHHHHHhcccCCEEEEEc
Q 017916          249 KAMGTGIDVSFDCAGFN-KTMSTALSATRAGGKVCLVG  285 (364)
Q Consensus       249 ~~~~~~~d~vid~~g~~-~~~~~~~~~l~~~G~~v~~g  285 (364)
                        ....+|+|+...... ..+..+.+.|+++|+++...
T Consensus       176 --~~~~fD~Vi~~~~~~~~~l~~~~~~LkpgG~l~i~~  211 (275)
T 1yb2_A          176 --SDQMYDAVIADIPDPWNHVQKIASMMKPGSVATFYL  211 (275)
T ss_dssp             --CSCCEEEEEECCSCGGGSHHHHHHTEEEEEEEEEEE
T ss_pred             --cCCCccEEEEcCcCHHHHHHHHHHHcCCCCEEEEEe
Confidence              134699998755433 67788999999999998875

>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}

Probab=95.76  E-value=0.031  Score=52.48  Aligned_cols=105  Identities=20%  Similarity=0.252  Sum_probs=68.5

Q ss_pred             HHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCC-CEEEEEecChhHHHHHHH----cCCCeEEecCCCcccHHHHHHHHHH
Q 017916          175 RRANIGPETNVLIMGAGPIGLVTMLGARAFGA-PRIVIVDVDDYRLSVAKE----LGADNIVKVSTNLQDIAEEVEKIQK  249 (364)
Q Consensus       175 ~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~-~~vv~~~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~i~~~~~  249 (364)
                      ....+++|++||-.|+|. |..+.++++.++. ..+++++.++.+.+.+++    +|...+........++..   .+  
T Consensus       253 ~~l~~~~g~~VLDlgaG~-G~~t~~la~~~~~~~~v~a~D~s~~~l~~~~~~~~~~g~~~v~~~~~D~~~~~~---~~--  326 (450)
T 2yxl_A          253 IVLDPKPGETVVDLAAAP-GGKTTHLAELMKNKGKIYAFDVDKMRMKRLKDFVKRMGIKIVKPLVKDARKAPE---II--  326 (450)
T ss_dssp             HHHCCCTTCEEEESSCTT-CHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCTTCCSS---SS--
T ss_pred             HhcCCCCcCEEEEeCCCc-cHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHcCCCcEEEEEcChhhcch---hh--
Confidence            446788999999988765 6677788887643 489999999988776654    466433222111111100   00  


Q ss_pred             HcCCCccEEEE---CCCC-------------------------HHHHHHHHHhcccCCEEEEEcC
Q 017916          250 AMGTGIDVSFD---CAGF-------------------------NKTMSTALSATRAGGKVCLVGM  286 (364)
Q Consensus       250 ~~~~~~d~vid---~~g~-------------------------~~~~~~~~~~l~~~G~~v~~g~  286 (364)
                       .+..+|+|+-   |+|.                         ...+..+++.|+|||+++....
T Consensus       327 -~~~~fD~Vl~D~Pcsg~g~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~lvy~tc  390 (450)
T 2yxl_A          327 -GEEVADKVLLDAPCTSSGTIGKNPELRWRLREDKINEMSQLQRELLESAARLVKPGGRLLYTTC  390 (450)
T ss_dssp             -CSSCEEEEEEECCCCCGGGTTTSTTHHHHCCTTSHHHHHHHHHHHHHHHHTTEEEEEEEEEEES
T ss_pred             -ccCCCCEEEEcCCCCCCeeeccChhhhhhCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeC
Confidence             1246999884   5443                         2467788899999999997654

>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7

Probab=95.76  E-value=0.033  Score=46.85  Aligned_cols=100  Identities=18%  Similarity=0.181  Sum_probs=67.7

Q ss_pred             HHHHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCC---C-eEEecCCCcccHHHHHHHHH
Q 017916          173 ACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGA---D-NIVKVSTNLQDIAEEVEKIQ  248 (364)
Q Consensus       173 ~l~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~---~-~~~~~~~~~~~~~~~i~~~~  248 (364)
                      .++...++++++||-.|+|. |..+..+++..  ..+++++.+++..+.+++...   . .++.-     +..+.   +.
T Consensus        62 ~~~~~~~~~~~~vLdiG~G~-G~~~~~l~~~~--~~v~~vD~~~~~~~~a~~~~~~~~~v~~~~~-----d~~~~---~~  130 (231)
T 1vbf_A           62 MLDELDLHKGQKVLEIGTGI-GYYTALIAEIV--DKVVSVEINEKMYNYASKLLSYYNNIKLILG-----DGTLG---YE  130 (231)
T ss_dssp             HHHHTTCCTTCEEEEECCTT-SHHHHHHHHHS--SEEEEEESCHHHHHHHHHHHTTCSSEEEEES-----CGGGC---CG
T ss_pred             HHHhcCCCCCCEEEEEcCCC-CHHHHHHHHHc--CEEEEEeCCHHHHHHHHHHHhhcCCeEEEEC-----Ccccc---cc
Confidence            34567788999999999865 77888888774  479999999988888876421   1 12211     11110   00


Q ss_pred             HHcCCCccEEEECCCCHHHHHHHHHhcccCCEEEEEc
Q 017916          249 KAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVG  285 (364)
Q Consensus       249 ~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g  285 (364)
                        ....+|+|+....-......+.+.|+++|+++..-
T Consensus       131 --~~~~fD~v~~~~~~~~~~~~~~~~L~pgG~l~~~~  165 (231)
T 1vbf_A          131 --EEKPYDRVVVWATAPTLLCKPYEQLKEGGIMILPI  165 (231)
T ss_dssp             --GGCCEEEEEESSBBSSCCHHHHHTEEEEEEEEEEE
T ss_pred             --cCCCccEEEECCcHHHHHHHHHHHcCCCcEEEEEE
Confidence              13579999876543344467889999999998764

>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}

Probab=95.76  E-value=0.02  Score=48.05  Aligned_cols=86  Identities=14%  Similarity=0.141  Sum_probs=54.9

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcCCCccEEE
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF  259 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vi  259 (364)
                      .+.++||+|+ +++|.+.++.+...|+ .|+.++++.+             .|..+ .++    ++++.+.. +++|++|
T Consensus         5 ~~k~vlVTGas~gIG~~~a~~l~~~G~-~V~~~~r~~~-------------~D~~~-~~~----v~~~~~~~-g~id~lv   64 (223)
T 3uce_A            5 DKTVYVVLGGTSGIGAELAKQLESEHT-IVHVASRQTG-------------LDISD-EKS----VYHYFETI-GAFDHLI   64 (223)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHCSTTE-EEEEESGGGT-------------CCTTC-HHH----HHHHHHHH-CSEEEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEecCCcc-------------cCCCC-HHH----HHHHHHHh-CCCCEEE
Confidence            4678999998 9999999998888899 5677665443             12211 122    33332222 4789999


Q ss_pred             ECCCCH-----------H---------------HHHHHHHhcccCCEEEEEcC
Q 017916          260 DCAGFN-----------K---------------TMSTALSATRAGGKVCLVGM  286 (364)
Q Consensus       260 d~~g~~-----------~---------------~~~~~~~~l~~~G~~v~~g~  286 (364)
                      +++|..           +               ..+.++..++++|+++.++.
T Consensus        65 ~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~~sS  117 (223)
T 3uce_A           65 VTAGSYAPAGKVVDVEVTQAKYAFDTKFWGAVLAAKHGARYLKQGGSITLTSG  117 (223)
T ss_dssp             ECCCCCCCCSCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGEEEEEEEEEECC
T ss_pred             ECCCCCCCCCCcccCCHHHHHhhheeeeeeHHHHHHHHHhhccCCeEEEEecc
Confidence            988732           1               22334455666789998863

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}

Probab=95.75  E-value=0.018  Score=50.30  Aligned_cols=94  Identities=14%  Similarity=0.102  Sum_probs=57.4

Q ss_pred             EEEEEcC-CHHHHHHHHHHHHC-CCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcCCCccEEEEC
Q 017916          184 NVLIMGA-GPIGLVTMLGARAF-GAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDC  261 (364)
Q Consensus       184 ~VLI~Ga-g~~G~~ai~la~~~-g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid~  261 (364)
                      +|||+|+ |.+|...++.+... |.+ |+++.++.++...+...++.. +..+-.  + .+.+.+.    -.++|+||.+
T Consensus         2 ~ilVtGatG~iG~~l~~~L~~~~g~~-V~~~~R~~~~~~~~~~~~v~~-~~~D~~--d-~~~l~~~----~~~~d~vi~~   72 (289)
T 3e48_A            2 NIMLTGATGHLGTHITNQAIANHIDH-FHIGVRNVEKVPDDWRGKVSV-RQLDYF--N-QESMVEA----FKGMDTVVFI   72 (289)
T ss_dssp             CEEEETTTSHHHHHHHHHHHHTTCTT-EEEEESSGGGSCGGGBTTBEE-EECCTT--C-HHHHHHH----TTTCSEEEEC
T ss_pred             EEEEEcCCchHHHHHHHHHhhCCCCc-EEEEECCHHHHHHhhhCCCEE-EEcCCC--C-HHHHHHH----HhCCCEEEEe
Confidence            6999998 99999999988877 885 666667766543333333332 222221  2 1233333    2479999999


Q ss_pred             CCCH-------HHHHHHHHhcccC--CEEEEEcC
Q 017916          262 AGFN-------KTMSTALSATRAG--GKVCLVGM  286 (364)
Q Consensus       262 ~g~~-------~~~~~~~~~l~~~--G~~v~~g~  286 (364)
                      ++..       .....+++.++..  ++++.++.
T Consensus        73 a~~~~~~~~~~~~~~~l~~aa~~~gv~~iv~~Ss  106 (289)
T 3e48_A           73 PSIIHPSFKRIPEVENLVYAAKQSGVAHIIFIGY  106 (289)
T ss_dssp             CCCCCSHHHHHHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred             CCCCccchhhHHHHHHHHHHHHHcCCCEEEEEcc
Confidence            8741       2334556655544  47887764

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}

Probab=95.75  E-value=0.049  Score=46.56  Aligned_cols=77  Identities=19%  Similarity=0.256  Sum_probs=49.0

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCC-CcccHHHHHHHHHHHcCCCccEE
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVST-NLQDIAEEVEKIQKAMGTGIDVS  258 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~-~~~~~~~~i~~~~~~~~~~~d~v  258 (364)
                      .+.++||+|+ |.+|.+.++.+...|+ .|++++++.+.    +..++ ..+..+- ..+++.+.++.+.+. -+++|++
T Consensus         6 ~~k~vlVTGas~giG~~ia~~l~~~G~-~V~~~~r~~~~----~~~~~-~~~~~D~~d~~~~~~~~~~~~~~-~g~id~l   78 (250)
T 2fwm_X            6 SGKNVWVTGAGKGIGYATALAFVEAGA-KVTGFDQAFTQ----EQYPF-ATEVMDVADAAQVAQVCQRLLAE-TERLDAL   78 (250)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCCCS----SCCSS-EEEECCTTCHHHHHHHHHHHHHH-CSCCCEE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCchhh----hcCCc-eEEEcCCCCHHHHHHHHHHHHHH-cCCCCEE
Confidence            4678999998 9999999999999999 56666665542    12332 2222222 223344444444332 3479999


Q ss_pred             EECCCC
Q 017916          259 FDCAGF  264 (364)
Q Consensus       259 id~~g~  264 (364)
                      |+++|.
T Consensus        79 v~~Ag~   84 (250)
T 2fwm_X           79 VNAAGI   84 (250)
T ss_dssp             EECCCC
T ss_pred             EECCCc
Confidence            999873

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}

Probab=95.75  E-value=0.065  Score=46.00  Aligned_cols=80  Identities=18%  Similarity=0.255  Sum_probs=49.3

Q ss_pred             CCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhH--HH-HHHHc---CCCe-EEecCCC-cccHHHHHHHHHHHcC
Q 017916          182 ETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYR--LS-VAKEL---GADN-IVKVSTN-LQDIAEEVEKIQKAMG  252 (364)
Q Consensus       182 g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~--~~-~~~~l---g~~~-~~~~~~~-~~~~~~~i~~~~~~~~  252 (364)
                      +.++||+|+ |.+|.+.++.+...|+ .|+.++++.++  .+ ..+++   +... .+..|-. .+++.+.++++.+.. 
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-   79 (258)
T 3a28_C            2 SKVAMVTGGAQGIGRGISEKLAADGF-DIAVADLPQQEEQAAETIKLIEAADQKAVFVGLDVTDKANFDSAIDEAAEKL-   79 (258)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTC-EEEEEECGGGHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHh-
Confidence            568999998 9999999998888899 56666666655  32 23333   3321 2222222 233334444443332 


Q ss_pred             CCccEEEECCC
Q 017916          253 TGIDVSFDCAG  263 (364)
Q Consensus       253 ~~~d~vid~~g  263 (364)
                      +++|++|+++|
T Consensus        80 g~iD~lv~nAg   90 (258)
T 3a28_C           80 GGFDVLVNNAG   90 (258)
T ss_dssp             TCCCEEEECCC
T ss_pred             CCCCEEEECCC
Confidence            47999999987

>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17

Probab=95.75  E-value=0.036  Score=48.31  Aligned_cols=98  Identities=16%  Similarity=0.116  Sum_probs=65.2

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHH-c-----CC--CeEEecCCCcccHHHHHHHHHHHc
Q 017916          180 GPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKE-L-----GA--DNIVKVSTNLQDIAEEVEKIQKAM  251 (364)
Q Consensus       180 ~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~-l-----g~--~~~~~~~~~~~~~~~~i~~~~~~~  251 (364)
                      ..+.+||+.|+|. |..+..+++..+...+.+++.+++-.+.+++ +     +.  ..+..+.   .|..+.+.    ..
T Consensus        74 ~~~~~VLdiG~G~-G~~~~~l~~~~~~~~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~---~D~~~~l~----~~  145 (275)
T 1iy9_A           74 PNPEHVLVVGGGD-GGVIREILKHPSVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQV---DDGFMHIA----KS  145 (275)
T ss_dssp             SSCCEEEEESCTT-CHHHHHHTTCTTCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEE---SCSHHHHH----TC
T ss_pred             CCCCEEEEECCch-HHHHHHHHhCCCCceEEEEECCHHHHHHHHHHhHhhccccCCCceEEEE---CcHHHHHh----hC
Confidence            3568999998754 5667777777677789999999988888775 2     11  1111111   22222222    12


Q ss_pred             CCCccEEEECCC----------CHHHHHHHHHhcccCCEEEEEc
Q 017916          252 GTGIDVSFDCAG----------FNKTMSTALSATRAGGKVCLVG  285 (364)
Q Consensus       252 ~~~~d~vid~~g----------~~~~~~~~~~~l~~~G~~v~~g  285 (364)
                      ...+|+|+....          +.+.+..+.+.|+++|.++...
T Consensus       146 ~~~fD~Ii~d~~~~~~~~~~l~~~~~~~~~~~~L~pgG~lv~~~  189 (275)
T 1iy9_A          146 ENQYDVIMVDSTEPVGPAVNLFTKGFYAGIAKALKEDGIFVAQT  189 (275)
T ss_dssp             CSCEEEEEESCSSCCSCCCCCSTTHHHHHHHHHEEEEEEEEEEC
T ss_pred             CCCeeEEEECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEc
Confidence            467999885332          1478899999999999998764

>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A*

Probab=95.74  E-value=0.035  Score=52.37  Aligned_cols=93  Identities=18%  Similarity=0.230  Sum_probs=68.3

Q ss_pred             CCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcCCCccEE
Q 017916          179 IGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVS  258 (364)
Q Consensus       179 ~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~v  258 (364)
                      .-.|.+|.|.|.|.+|..+++.++.+|+ .|++++.+..+.......|...        .+    +.++    -...|++
T Consensus       274 ~L~GktVgIIG~G~IG~~vA~~l~~~G~-~V~v~d~~~~~~~~a~~~G~~~--------~~----l~el----l~~aDiV  336 (494)
T 3d64_A          274 MIAGKIAVVAGYGDVGKGCAQSLRGLGA-TVWVTEIDPICALQAAMEGYRV--------VT----MEYA----ADKADIF  336 (494)
T ss_dssp             CCTTCEEEEECCSHHHHHHHHHHHTTTC-EEEEECSCHHHHHHHHTTTCEE--------CC----HHHH----TTTCSEE
T ss_pred             ccCCCEEEEEccCHHHHHHHHHHHHCCC-EEEEEeCChHhHHHHHHcCCEe--------CC----HHHH----HhcCCEE
Confidence            3578999999999999999999999999 6888888877643334455431        11    2222    2468999


Q ss_pred             EECCCCHHHH-HHHHHhcccCCEEEEEcCCC
Q 017916          259 FDCAGFNKTM-STALSATRAGGKVCLVGMGH  288 (364)
Q Consensus       259 id~~g~~~~~-~~~~~~l~~~G~~v~~g~~~  288 (364)
                      +.+++....+ ...++.|+++..++.++...
T Consensus       337 i~~~~t~~lI~~~~l~~MK~gAilINvgrg~  367 (494)
T 3d64_A          337 VTATGNYHVINHDHMKAMRHNAIVCNIGHFD  367 (494)
T ss_dssp             EECSSSSCSBCHHHHHHCCTTEEEEECSSSS
T ss_pred             EECCCcccccCHHHHhhCCCCcEEEEcCCCc
Confidence            9987654434 36788999999999887543

>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18

Probab=95.73  E-value=0.072  Score=46.69  Aligned_cols=96  Identities=16%  Similarity=0.140  Sum_probs=65.9

Q ss_pred             CCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHH----cCCC---eEEecCCCcccHHHHHHHHHHH
Q 017916          178 NIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKE----LGAD---NIVKVSTNLQDIAEEVEKIQKA  250 (364)
Q Consensus       178 ~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~----lg~~---~~~~~~~~~~~~~~~i~~~~~~  250 (364)
                      .++++.+||-.|+|. |..+..+++..|+ .+++++.++...+.+++    .|..   .++.-+.....          .
T Consensus        79 ~~~~~~~vLDiGcG~-G~~~~~l~~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~----------~  146 (297)
T 2o57_A           79 VLQRQAKGLDLGAGY-GGAARFLVRKFGV-SIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFLEIP----------C  146 (297)
T ss_dssp             CCCTTCEEEEETCTT-SHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTTSCS----------S
T ss_pred             CCCCCCEEEEeCCCC-CHHHHHHHHHhCC-EEEEEeCCHHHHHHHHHHHHhcCCCcceEEEEcCcccCC----------C
Confidence            788999999999764 7788888888787 79999999887766654    3332   12211111100          0


Q ss_pred             cCCCccEEEECCC-----C-HHHHHHHHHhcccCCEEEEEc
Q 017916          251 MGTGIDVSFDCAG-----F-NKTMSTALSATRAGGKVCLVG  285 (364)
Q Consensus       251 ~~~~~d~vid~~g-----~-~~~~~~~~~~l~~~G~~v~~g  285 (364)
                      ..+.+|+|+....     . ...+..+.+.|+|+|+++...
T Consensus       147 ~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~  187 (297)
T 2o57_A          147 EDNSYDFIWSQDAFLHSPDKLKVFQECARVLKPRGVMAITD  187 (297)
T ss_dssp             CTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             CCCCEeEEEecchhhhcCCHHHHHHHHHHHcCCCeEEEEEE
Confidence            1356999986432     1 467889999999999998775

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}

Probab=95.73  E-value=0.057  Score=47.21  Aligned_cols=82  Identities=22%  Similarity=0.257  Sum_probs=51.3

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhH-----------HHHHHHcCCCe-EEecCC-CcccHHHHHHH
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYR-----------LSVAKELGADN-IVKVST-NLQDIAEEVEK  246 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~-----------~~~~~~lg~~~-~~~~~~-~~~~~~~~i~~  246 (364)
                      .+.++||+|+ +++|.+.++.+...|+ .|+.++++.++           .+.++..+... .+..+- ..+++.+.+++
T Consensus         8 ~~k~vlVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~   86 (285)
T 3sc4_A            8 RGKTMFISGGSRGIGLAIAKRVAADGA-NVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQALPIVGDIRDGDAVAAAVAK   86 (285)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHTTTC-EEEEEESCCSCCSSSCCCHHHHHHHHHHHTSEEEEEECCTTSHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECChhhhhhhhHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHH
Confidence            4689999998 9999999999988999 56777666542           22233444332 222222 22334444444


Q ss_pred             HHHHcCCCccEEEECCCC
Q 017916          247 IQKAMGTGIDVSFDCAGF  264 (364)
Q Consensus       247 ~~~~~~~~~d~vid~~g~  264 (364)
                      +.+.. +++|++|+++|.
T Consensus        87 ~~~~~-g~id~lvnnAg~  103 (285)
T 3sc4_A           87 TVEQF-GGIDICVNNASA  103 (285)
T ss_dssp             HHHHH-SCCSEEEECCCC
T ss_pred             HHHHc-CCCCEEEECCCC
Confidence            43333 479999999873

>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31

Probab=95.73  E-value=0.14  Score=47.56  Aligned_cols=106  Identities=15%  Similarity=0.157  Sum_probs=68.8

Q ss_pred             HHHHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHH-----------HHcC--CCeEEecC--CCc
Q 017916          173 ACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-----------KELG--ADNIVKVS--TNL  237 (364)
Q Consensus       173 ~l~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~-----------~~lg--~~~~~~~~--~~~  237 (364)
                      .++...++++++||=.|+|. |..++.+|+..|...|++++.++...+.+           +.+|  ...+....  ...
T Consensus       234 ml~~l~l~~g~~VLDLGCGs-G~la~~LA~~~g~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~Gl~~~nV~~i~gD~~~  312 (433)
T 1u2z_A          234 VYQQCQLKKGDTFMDLGSGV-GNCVVQAALECGCALSFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNVEFSLKKSFV  312 (433)
T ss_dssp             HHHHTTCCTTCEEEEESCTT-SHHHHHHHHHHCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCEEEEESSCST
T ss_pred             HHHhcCCCCCCEEEEeCCCc-CHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHhHHHHHHHHHHcCCCCCceEEEEcCccc
Confidence            44667889999999998765 78888999988877899999998765544           3355  33322111  111


Q ss_pred             ccHHHHHHHHHHHcCCCccEEEEC--CCCH---HHHHHHHHhcccCCEEEEEc
Q 017916          238 QDIAEEVEKIQKAMGTGIDVSFDC--AGFN---KTMSTALSATRAGGKVCLVG  285 (364)
Q Consensus       238 ~~~~~~i~~~~~~~~~~~d~vid~--~g~~---~~~~~~~~~l~~~G~~v~~g  285 (364)
                      ..+  .+...    ...+|+|+-.  ...+   ..+..+.+.|++||+++...
T Consensus       313 ~~~--~~~~~----~~~FDvIvvn~~l~~~d~~~~L~el~r~LKpGG~lVi~d  359 (433)
T 1u2z_A          313 DNN--RVAEL----IPQCDVILVNNFLFDEDLNKKVEKILQTAKVGCKIISLK  359 (433)
T ss_dssp             TCH--HHHHH----GGGCSEEEECCTTCCHHHHHHHHHHHTTCCTTCEEEESS
T ss_pred             ccc--ccccc----cCCCCEEEEeCccccccHHHHHHHHHHhCCCCeEEEEee
Confidence            111  01111    2469999852  2223   34468889999999999874

>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*

Probab=95.71  E-value=0.049  Score=43.23  Aligned_cols=102  Identities=14%  Similarity=0.162  Sum_probs=62.5

Q ss_pred             cCCCCCCEEEEEcCCHHHHHHHHHHHHCCC-CEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcCCCc
Q 017916          177 ANIGPETNVLIMGAGPIGLVTMLGARAFGA-PRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGI  255 (364)
Q Consensus       177 ~~~~~g~~VLI~Gag~~G~~ai~la~~~g~-~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~  255 (364)
                      ..++++++||-.|+|. |..+..+++.+|. ..+++++.++ ..+.    .-..++..+....+..+.+....  ....+
T Consensus        18 ~~~~~~~~vLd~G~G~-G~~~~~l~~~~~~~~~v~~~D~~~-~~~~----~~~~~~~~d~~~~~~~~~~~~~~--~~~~~   89 (180)
T 1ej0_A           18 KLFKPGMTVVDLGAAP-GGWSQYVVTQIGGKGRIIACDLLP-MDPI----VGVDFLQGDFRDELVMKALLERV--GDSKV   89 (180)
T ss_dssp             CCCCTTCEEEEESCTT-CHHHHHHHHHHCTTCEEEEEESSC-CCCC----TTEEEEESCTTSHHHHHHHHHHH--TTCCE
T ss_pred             CCCCCCCeEEEeCCCC-CHHHHHHHHHhCCCCeEEEEECcc-cccc----CcEEEEEcccccchhhhhhhccC--CCCce
Confidence            3478899999999866 7788888888643 4789998876 3221    11122222221111111122111  24579


Q ss_pred             cEEEE-----CCCC------------HHHHHHHHHhcccCCEEEEEcC
Q 017916          256 DVSFD-----CAGF------------NKTMSTALSATRAGGKVCLVGM  286 (364)
Q Consensus       256 d~vid-----~~g~------------~~~~~~~~~~l~~~G~~v~~g~  286 (364)
                      |+|+.     ..+.            ...+..+.+.|+++|+++....
T Consensus        90 D~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~  137 (180)
T 1ej0_A           90 QVVMSDMAPNMSGTPAVDIPRAMYLVELALEMCRDVLAPGGSFVVKVF  137 (180)
T ss_dssp             EEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             eEEEECCCccccCCCccchHHHHHHHHHHHHHHHHHcCCCcEEEEEEe
Confidence            99997     2332            3667888999999999987643

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}

Probab=95.69  E-value=0.067  Score=46.44  Aligned_cols=82  Identities=22%  Similarity=0.304  Sum_probs=50.4

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhH-----------HHHHHHcCCCe-EEecCC-CcccHHHHHHH
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYR-----------LSVAKELGADN-IVKVST-NLQDIAEEVEK  246 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~-----------~~~~~~lg~~~-~~~~~~-~~~~~~~~i~~  246 (364)
                      .+.++||+|+ +++|.+.++.+...|+ .|+.++++.++           .+.++..+... .+..|- ..++..+.+++
T Consensus         5 ~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~   83 (274)
T 3e03_A            5 SGKTLFITGASRGIGLAIALRAARDGA-NVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGLALKCDIREEDQVRAAVAA   83 (274)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCCSCCTTSCCCHHHHHHHHHHHTSEEEEEECCTTCHHHHHHHHHH
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeccchhhhhhHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHH
Confidence            4789999998 9999999999989999 56777665432           12223334322 222222 22333334444


Q ss_pred             HHHHcCCCccEEEECCCC
Q 017916          247 IQKAMGTGIDVSFDCAGF  264 (364)
Q Consensus       247 ~~~~~~~~~d~vid~~g~  264 (364)
                      +.+.. +++|++|+++|.
T Consensus        84 ~~~~~-g~iD~lvnnAG~  100 (274)
T 3e03_A           84 TVDTF-GGIDILVNNASA  100 (274)
T ss_dssp             HHHHH-SCCCEEEECCCC
T ss_pred             HHHHc-CCCCEEEECCCc
Confidence            43332 479999999883

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}

Probab=95.69  E-value=0.017  Score=48.98  Aligned_cols=95  Identities=15%  Similarity=0.184  Sum_probs=57.9

Q ss_pred             CEEEEEcC-CHHHHHHHHHHHHCC-CCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcCCCccEEEE
Q 017916          183 TNVLIMGA-GPIGLVTMLGARAFG-APRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  260 (364)
Q Consensus       183 ~~VLI~Ga-g~~G~~ai~la~~~g-~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid  260 (364)
                      .+|||+|+ |.+|.+.++.+...| + .|+++++++++.+.+...++. ++..+-.  + .+.+++..    .++|++|.
T Consensus        24 k~vlVtGatG~iG~~l~~~L~~~G~~-~V~~~~R~~~~~~~~~~~~~~-~~~~Dl~--d-~~~~~~~~----~~~D~vv~   94 (236)
T 3qvo_A           24 KNVLILGAGGQIARHVINQLADKQTI-KQTLFARQPAKIHKPYPTNSQ-IIMGDVL--N-HAALKQAM----QGQDIVYA   94 (236)
T ss_dssp             EEEEEETTTSHHHHHHHHHHTTCTTE-EEEEEESSGGGSCSSCCTTEE-EEECCTT--C-HHHHHHHH----TTCSEEEE
T ss_pred             cEEEEEeCCcHHHHHHHHHHHhCCCc-eEEEEEcChhhhcccccCCcE-EEEecCC--C-HHHHHHHh----cCCCEEEE
Confidence            57999998 999999999999899 6 677777776653321111221 2222211  2 22343333    36899999


Q ss_pred             CCCCHH---HHHHHHHhcccC--CEEEEEcC
Q 017916          261 CAGFNK---TMSTALSATRAG--GKVCLVGM  286 (364)
Q Consensus       261 ~~g~~~---~~~~~~~~l~~~--G~~v~~g~  286 (364)
                      ++|...   ..+.+++.++..  ++++.++.
T Consensus        95 ~a~~~~~~~~~~~~~~~~~~~~~~~iV~iSS  125 (236)
T 3qvo_A           95 NLTGEDLDIQANSVIAAMKACDVKRLIFVLS  125 (236)
T ss_dssp             ECCSTTHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred             cCCCCchhHHHHHHHHHHHHcCCCEEEEEec
Confidence            888532   233455655443  68888763

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2

Probab=95.69  E-value=0.077  Score=44.96  Aligned_cols=81  Identities=22%  Similarity=0.215  Sum_probs=50.0

Q ss_pred             CCEEEEEcC-CHHHHHHHHHHHHCCCC------EEEEEecChhHHHHH-HHc---CCC-eEEecCCC-cccHHHHHHHHH
Q 017916          182 ETNVLIMGA-GPIGLVTMLGARAFGAP------RIVIVDVDDYRLSVA-KEL---GAD-NIVKVSTN-LQDIAEEVEKIQ  248 (364)
Q Consensus       182 g~~VLI~Ga-g~~G~~ai~la~~~g~~------~vv~~~~~~~~~~~~-~~l---g~~-~~~~~~~~-~~~~~~~i~~~~  248 (364)
                      +.+|||+|+ |.+|.+.++.+...|+.      .|+.++++.++.+.+ +++   +.. ..+..+-. .+++.+.++.+.
T Consensus         2 ~k~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~   81 (244)
T 2bd0_A            2 KHILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHIV   81 (244)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCEEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHHHHHHHHccCCeeeEEEecCCCHHHHHHHHHHHH
Confidence            467999998 99999999888888883      567777776665433 232   322 12222222 233333444433


Q ss_pred             HHcCCCccEEEECCC
Q 017916          249 KAMGTGIDVSFDCAG  263 (364)
Q Consensus       249 ~~~~~~~d~vid~~g  263 (364)
                      +. .+++|++|+++|
T Consensus        82 ~~-~g~id~li~~Ag   95 (244)
T 2bd0_A           82 ER-YGHIDCLVNNAG   95 (244)
T ss_dssp             HH-TSCCSEEEECCC
T ss_pred             Hh-CCCCCEEEEcCC
Confidence            32 347999999987

>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}

Probab=95.68  E-value=0.055  Score=46.99  Aligned_cols=108  Identities=19%  Similarity=0.180  Sum_probs=66.0

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHH-HHHHcCC--CeEEecCCCcccHHHHHHHHHHHcCCCccE
Q 017916          181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLS-VAKELGA--DNIVKVSTNLQDIAEEVEKIQKAMGTGIDV  257 (364)
Q Consensus       181 ~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~-~~~~lg~--~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~  257 (364)
                      .+.+++|.|+|++|.+++..+...|+..|.++.++.++.+ ++++++.  .....++    ++.          ...+|+
T Consensus       119 ~~k~~lvlGaGg~~~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~~~~----~l~----------~~~~Di  184 (272)
T 3pwz_A          119 RNRRVLLLGAGGAVRGALLPFLQAGPSELVIANRDMAKALALRNELDHSRLRISRYE----ALE----------GQSFDI  184 (272)
T ss_dssp             TTSEEEEECCSHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHCCTTEEEECSG----GGT----------TCCCSE
T ss_pred             cCCEEEEECccHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhccCCeeEeeHH----Hhc----------ccCCCE
Confidence            5789999999999999999888899878888888887755 4556653  1222221    110          157999


Q ss_pred             EEECCCCHHHHH---HHHHhcccCCEEEEEcCCCCCccccchhhhhcCc
Q 017916          258 SFDCAGFNKTMS---TALSATRAGGKVCLVGMGHHEMTVPLTPAAVREV  303 (364)
Q Consensus       258 vid~~g~~~~~~---~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~  303 (364)
                      ||+|+..+..-.   .....++++..++++-..... ...+...-.+++
T Consensus       185 vInaTp~gm~~~~~~i~~~~l~~~~~V~DlvY~P~~-T~ll~~A~~~G~  232 (272)
T 3pwz_A          185 VVNATSASLTADLPPLPADVLGEAALAYELAYGKGL-TPFLRLAREQGQ  232 (272)
T ss_dssp             EEECSSGGGGTCCCCCCGGGGTTCSEEEESSCSCCS-CHHHHHHHHHSC
T ss_pred             EEECCCCCCCCCCCCCCHHHhCcCCEEEEeecCCCC-CHHHHHHHHCCC
Confidence            999987431100   112456666666665433222 223333444454

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0

Probab=95.68  E-value=0.09  Score=45.64  Aligned_cols=82  Identities=23%  Similarity=0.251  Sum_probs=49.8

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEec-------------ChhHHHH----HHHcCCCe-EEecCC-CcccH
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDV-------------DDYRLSV----AKELGADN-IVKVST-NLQDI  240 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~-------------~~~~~~~----~~~lg~~~-~~~~~~-~~~~~  240 (364)
                      .|.++||+|+ +++|.+.++.+...|+ .|+.+++             +.++.+.    ++..+... .+..+- ..+++
T Consensus        10 ~~k~~lVTGas~GIG~a~a~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v   88 (277)
T 3tsc_A           10 EGRVAFITGAARGQGRAHAVRMAAEGA-DIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANRRIVAAVVDTRDFDRL   88 (277)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHH
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHcCC-EEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHH
Confidence            5789999998 9999999999999999 5666655             3333322    22334332 222222 22333


Q ss_pred             HHHHHHHHHHcCCCccEEEECCCC
Q 017916          241 AEEVEKIQKAMGTGIDVSFDCAGF  264 (364)
Q Consensus       241 ~~~i~~~~~~~~~~~d~vid~~g~  264 (364)
                      .+.++++.+.. +++|++|+++|.
T Consensus        89 ~~~~~~~~~~~-g~id~lvnnAg~  111 (277)
T 3tsc_A           89 RKVVDDGVAAL-GRLDIIVANAGV  111 (277)
T ss_dssp             HHHHHHHHHHH-SCCCEEEECCCC
T ss_pred             HHHHHHHHHHc-CCCCEEEECCCC
Confidence            33444433322 479999999873

>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*

Probab=95.68  E-value=0.059  Score=50.58  Aligned_cols=101  Identities=22%  Similarity=0.242  Sum_probs=66.6

Q ss_pred             HcCCCCCCEEEEEcCCHHHHHHHHHHHHCCC-CEEEEEecChhHHHHHH----HcCCCeEEecCCCcccHHHHHHHHHHH
Q 017916          176 RANIGPETNVLIMGAGPIGLVTMLGARAFGA-PRIVIVDVDDYRLSVAK----ELGADNIVKVSTNLQDIAEEVEKIQKA  250 (364)
Q Consensus       176 ~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~-~~vv~~~~~~~~~~~~~----~lg~~~~~~~~~~~~~~~~~i~~~~~~  250 (364)
                      ...+++|++||=.|+|. |..++++|+.++. ..|++++.++++.+.++    .+|.. +....   .|..+    +...
T Consensus        96 ~L~~~~g~~VLDlgaGp-G~kt~~LA~~~~~~g~V~AvDis~~~l~~a~~n~~r~G~~-v~~~~---~Da~~----l~~~  166 (464)
T 3m6w_A           96 LLDPKPGERVLDLAAAP-GGKTTHLAARMGGKGLLLANEVDGKRVRGLLENVERWGAP-LAVTQ---APPRA----LAEA  166 (464)
T ss_dssp             HHCCCTTCEEEESSCTT-CHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHCCC-CEEEC---SCHHH----HHHH
T ss_pred             hcCcCCCCEEEEEcCCc-CHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCe-EEEEE---CCHHH----hhhh
Confidence            35678999998887654 5567778877642 47999999998887665    45765 32222   23222    1111


Q ss_pred             cCCCccEEEE---CCCC-------------------------HHHHHHHHHhcccCCEEEEEc
Q 017916          251 MGTGIDVSFD---CAGF-------------------------NKTMSTALSATRAGGKVCLVG  285 (364)
Q Consensus       251 ~~~~~d~vid---~~g~-------------------------~~~~~~~~~~l~~~G~~v~~g  285 (364)
                      ....+|.|+-   |+|.                         .+.+..+++.|+|||+++...
T Consensus       167 ~~~~FD~Il~D~PcSg~G~~rr~pd~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvysT  229 (464)
T 3m6w_A          167 FGTYFHRVLLDAPCSGEGMFRKDREAARHWGPSAPKRMAEVQKALLAQASRLLGPGGVLVYST  229 (464)
T ss_dssp             HCSCEEEEEEECCCCCGGGTTTCTTSGGGCCTTHHHHHHHHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred             ccccCCEEEECCCcCCccccccChHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEe
Confidence            2567999983   4432                         346677888999999998753

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G

Probab=95.68  E-value=0.058  Score=45.69  Aligned_cols=81  Identities=20%  Similarity=0.182  Sum_probs=48.7

Q ss_pred             CCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHH----HHcCCCe-EEecCC-CcccHHHHHHHHHHHcCCC
Q 017916          182 ETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA----KELGADN-IVKVST-NLQDIAEEVEKIQKAMGTG  254 (364)
Q Consensus       182 g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~----~~lg~~~-~~~~~~-~~~~~~~~i~~~~~~~~~~  254 (364)
                      |.+|||+|+ |.+|...++.+...|+++++...++.++.+.+    +..+... .+..+- ..+++.+.++.+... -++
T Consensus         1 ~k~vlVTGasggiG~~la~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~g~   79 (244)
T 1edo_A            1 SPVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDA-WGT   79 (244)
T ss_dssp             CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHH-SSC
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEeCCCCCHHHHHHHHHHHHHH-cCC
Confidence            468999998 99999999999999995443356666554332    2234321 222221 223333444433332 347


Q ss_pred             ccEEEECCC
Q 017916          255 IDVSFDCAG  263 (364)
Q Consensus       255 ~d~vid~~g  263 (364)
                      +|++|+++|
T Consensus        80 id~li~~Ag   88 (244)
T 1edo_A           80 IDVVVNNAG   88 (244)
T ss_dssp             CSEEEECCC
T ss_pred             CCEEEECCC
Confidence            999999887

>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*

Probab=95.68  E-value=0.053  Score=46.44  Aligned_cols=99  Identities=13%  Similarity=0.111  Sum_probs=65.2

Q ss_pred             CCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHH----cCCCeEEecCCCcccHHHHHHHHHH--HcC
Q 017916          179 IGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKE----LGADNIVKVSTNLQDIAEEVEKIQK--AMG  252 (364)
Q Consensus       179 ~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~i~~~~~--~~~  252 (364)
                      ..++.+||=.|+|. |..++.+|+......|++++.+++..+.+++    +|...+..+..   +..    ++..  ...
T Consensus        78 ~~~~~~vLDiG~G~-G~~~i~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~l~~v~~~~~---d~~----~~~~~~~~~  149 (249)
T 3g89_A           78 WQGPLRVLDLGTGA-GFPGLPLKIVRPELELVLVDATRKKVAFVERAIEVLGLKGARALWG---RAE----VLAREAGHR  149 (249)
T ss_dssp             CCSSCEEEEETCTT-TTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEEC---CHH----HHTTSTTTT
T ss_pred             cCCCCEEEEEcCCC-CHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEEC---cHH----HhhcccccC
Confidence            35788999888754 6667778877655589999999988777654    56653322222   221    1211  012


Q ss_pred             CCccEEEEC-CCC-HHHHHHHHHhcccCCEEEEEc
Q 017916          253 TGIDVSFDC-AGF-NKTMSTALSATRAGGKVCLVG  285 (364)
Q Consensus       253 ~~~d~vid~-~g~-~~~~~~~~~~l~~~G~~v~~g  285 (364)
                      ..||+|+.. +.. ...+..+.+.|+++|+++.+-
T Consensus       150 ~~fD~I~s~a~~~~~~ll~~~~~~LkpgG~l~~~~  184 (249)
T 3g89_A          150 EAYARAVARAVAPLCVLSELLLPFLEVGGAAVAMK  184 (249)
T ss_dssp             TCEEEEEEESSCCHHHHHHHHGGGEEEEEEEEEEE
T ss_pred             CCceEEEECCcCCHHHHHHHHHHHcCCCeEEEEEe
Confidence            579999863 332 456677889999999998764

>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}

Probab=95.67  E-value=0.064  Score=47.29  Aligned_cols=94  Identities=16%  Similarity=0.138  Sum_probs=62.1

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHH-HHHHcCCC--eEEecCCCcccHHHHHHHHHHHcCCCccE
Q 017916          181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLS-VAKELGAD--NIVKVSTNLQDIAEEVEKIQKAMGTGIDV  257 (364)
Q Consensus       181 ~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~-~~~~lg~~--~~~~~~~~~~~~~~~i~~~~~~~~~~~d~  257 (364)
                      .+.+|+|.|+|.+|.+++..+...|+..|+++.++.++.+ ++++++..  .+.+       + +.+.+.    -.++|+
T Consensus       140 ~~~~vlVlGaGg~g~aia~~L~~~G~~~V~v~nR~~~ka~~la~~~~~~~~~~~~-------~-~~~~~~----~~~aDi  207 (297)
T 2egg_A          140 DGKRILVIGAGGGARGIYFSLLSTAAERIDMANRTVEKAERLVREGDERRSAYFS-------L-AEAETR----LAEYDI  207 (297)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHSCSSSCCEEC-------H-HHHHHT----GGGCSE
T ss_pred             CCCEEEEECcHHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhhhccCceee-------H-HHHHhh----hccCCE
Confidence            5789999999999999999999999877888888887754 55666642  1221       1 112221    246999


Q ss_pred             EEECCCCHHHH-----HHHHHhcccCCEEEEEcC
Q 017916          258 SFDCAGFNKTM-----STALSATRAGGKVCLVGM  286 (364)
Q Consensus       258 vid~~g~~~~~-----~~~~~~l~~~G~~v~~g~  286 (364)
                      +|+|++.+...     ......++++..++++..
T Consensus       208 vIn~t~~~~~~~~~~~~i~~~~l~~~~~v~D~~y  241 (297)
T 2egg_A          208 IINTTSVGMHPRVEVQPLSLERLRPGVIVSDIIY  241 (297)
T ss_dssp             EEECSCTTCSSCCSCCSSCCTTCCTTCEEEECCC
T ss_pred             EEECCCCCCCCCCCCCCCCHHHcCCCCEEEEcCC
Confidence            99999854210     011234666666666654

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2

Probab=95.67  E-value=0.068  Score=45.25  Aligned_cols=78  Identities=27%  Similarity=0.206  Sum_probs=50.6

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHH-HHcCCCeEEecCCCcccHHHHHHHHHHHcCCCccEE
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVS  258 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~-~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~v  258 (364)
                      ++.++||+|+ |.+|.+.++.+...|+ .|++++++.++.+.+ +++.-...+..+-.  + .+.++++.. .-+++|++
T Consensus         6 ~~~~vlVTGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~--~-~~~~~~~~~-~~~~id~v   80 (244)
T 1cyd_A            6 SGLRALVTGAGKGIGRDTVKALHASGA-KVVAVTRTNSDLVSLAKECPGIEPVCVDLG--D-WDATEKALG-GIGPVDLL   80 (244)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHSTTCEEEECCTT--C-HHHHHHHHT-TCCCCSEE
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhccCCCcEEecCC--C-HHHHHHHHH-HcCCCCEE
Confidence            4679999998 9999999999999999 577777777665433 33322223332222  1 223444433 12469999


Q ss_pred             EECCC
Q 017916          259 FDCAG  263 (364)
Q Consensus       259 id~~g  263 (364)
                      |+++|
T Consensus        81 i~~Ag   85 (244)
T 1cyd_A           81 VNNAA   85 (244)
T ss_dssp             EECCC
T ss_pred             EECCc
Confidence            99988

>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41

Probab=95.66  E-value=0.06  Score=46.18  Aligned_cols=100  Identities=20%  Similarity=0.233  Sum_probs=65.8

Q ss_pred             HHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHc----CCCeEEecCCCcccHHHHHHHHHHH
Q 017916          175 RRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKEL----GADNIVKVSTNLQDIAEEVEKIQKA  250 (364)
Q Consensus       175 ~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~l----g~~~~~~~~~~~~~~~~~i~~~~~~  250 (364)
                      +....+++.+||-.|+| .|..+..+++.. . .+++++.+++..+.+++.    +...+......-.++.        .
T Consensus        31 ~~l~~~~~~~vLDiGcG-~G~~~~~l~~~~-~-~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~l~--------~   99 (260)
T 1vl5_A           31 QIAALKGNEEVLDVATG-GGHVANAFAPFV-K-KVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDAEQMP--------F   99 (260)
T ss_dssp             HHHTCCSCCEEEEETCT-TCHHHHHHGGGS-S-EEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC-CCC--------S
T ss_pred             HHhCCCCCCEEEEEeCC-CCHHHHHHHHhC-C-EEEEEeCCHHHHHHHHHHHHhcCCCceEEEEecHHhCC--------C
Confidence            44566789999999976 366777777764 3 799999999887776643    3322111111111110        0


Q ss_pred             cCCCccEEEECCCC------HHHHHHHHHhcccCCEEEEEc
Q 017916          251 MGTGIDVSFDCAGF------NKTMSTALSATRAGGKVCLVG  285 (364)
Q Consensus       251 ~~~~~d~vid~~g~------~~~~~~~~~~l~~~G~~v~~g  285 (364)
                      ..+.+|+|+....-      ...+.++.+.|+|+|+++...
T Consensus       100 ~~~~fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~~~~  140 (260)
T 1vl5_A          100 TDERFHIVTCRIAAHHFPNPASFVSEAYRVLKKGGQLLLVD  140 (260)
T ss_dssp             CTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             CCCCEEEEEEhhhhHhcCCHHHHHHHHHHHcCCCCEEEEEE
Confidence            13579999975432      467889999999999998864

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}

Probab=95.65  E-value=0.082  Score=44.95  Aligned_cols=80  Identities=20%  Similarity=0.265  Sum_probs=50.2

Q ss_pred             CCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHH-HHc----CCC-eEEecCC-CcccHHHHHHHHHHHcCC
Q 017916          182 ETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KEL----GAD-NIVKVST-NLQDIAEEVEKIQKAMGT  253 (364)
Q Consensus       182 g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~-~~l----g~~-~~~~~~~-~~~~~~~~i~~~~~~~~~  253 (364)
                      +.++||+|+ |.+|.+.+..+...|+ .|+.++++.++.+.+ +++    +.. ..+..+- ..+++.+.++.+.... +
T Consensus         2 ~k~vlItGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~   79 (250)
T 2cfc_A            2 SRVAIVTGASSGNGLAIATRFLARGD-RVAALDLSAETLEETARTHWHAYADKVLRVRADVADEGDVNAAIAATMEQF-G   79 (250)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHSTTTGGGEEEEECCTTCHHHHHHHHHHHHHHH-S
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHh-C
Confidence            568999998 9999999999988998 577777777655433 333    221 1222222 1233333444333322 4


Q ss_pred             CccEEEECCC
Q 017916          254 GIDVSFDCAG  263 (364)
Q Consensus       254 ~~d~vid~~g  263 (364)
                      ++|++|+++|
T Consensus        80 ~id~li~~Ag   89 (250)
T 2cfc_A           80 AIDVLVNNAG   89 (250)
T ss_dssp             CCCEEEECCC
T ss_pred             CCCEEEECCC
Confidence            7999999887

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*

Probab=95.63  E-value=0.06  Score=45.88  Aligned_cols=82  Identities=17%  Similarity=0.285  Sum_probs=49.5

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEec-ChhHHHH----HHHcCCCe-EEecCC-CcccHHHHHHHHHHHcC
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDV-DDYRLSV----AKELGADN-IVKVST-NLQDIAEEVEKIQKAMG  252 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~-~~~~~~~----~~~lg~~~-~~~~~~-~~~~~~~~i~~~~~~~~  252 (364)
                      .+.++||+|+ +.+|.+.++.+...|++ |+.++. +.++.+.    ++..+... .+..+- ..+++.+.++++.+.. 
T Consensus         3 ~~k~~lVTGas~gIG~~ia~~l~~~G~~-V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~-   80 (246)
T 3osu_A            3 MTKSALVTGASRGIGRSIALQLAEEGYN-VAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVADADEVKAMIKEVVSQF-   80 (246)
T ss_dssp             CSCEEEETTCSSHHHHHHHHHHHHTTCE-EEEEESSCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCE-EEEEeCCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc-
Confidence            3678999998 99999999999999995 444444 4444332    23334332 222222 2233344444443332 


Q ss_pred             CCccEEEECCCC
Q 017916          253 TGIDVSFDCAGF  264 (364)
Q Consensus       253 ~~~d~vid~~g~  264 (364)
                      +++|++|+++|.
T Consensus        81 g~id~lv~nAg~   92 (246)
T 3osu_A           81 GSLDVLVNNAGI   92 (246)
T ss_dssp             SCCCEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            479999999873

>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*

Probab=95.62  E-value=0.13  Score=44.87  Aligned_cols=100  Identities=18%  Similarity=0.208  Sum_probs=65.6

Q ss_pred             CCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHc-CC-------CeEEecCCCcccHHHHHHHHHH
Q 017916          178 NIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKEL-GA-------DNIVKVSTNLQDIAEEVEKIQK  249 (364)
Q Consensus       178 ~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~l-g~-------~~~~~~~~~~~~~~~~i~~~~~  249 (364)
                      ...++.+||+.|+|. |..+..+++..+...+++++.+++..+.+++. ..       ..+...   ..|..+.+.    
T Consensus        75 ~~~~~~~VLdiG~G~-G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~---~~D~~~~l~----  146 (283)
T 2i7c_A           75 VSKEPKNVLVVGGGD-GGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVF---IEDASKFLE----  146 (283)
T ss_dssp             TSSSCCEEEEEECTT-SHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEE---ESCHHHHHH----
T ss_pred             cCCCCCeEEEEeCCc-CHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhccccCCCcEEEE---ECChHHHHH----
Confidence            345678999998654 56666777766566899999999988888763 21       111111   123332222    


Q ss_pred             HcCCCccEEEE-CC---C------CHHHHHHHHHhcccCCEEEEEc
Q 017916          250 AMGTGIDVSFD-CA---G------FNKTMSTALSATRAGGKVCLVG  285 (364)
Q Consensus       250 ~~~~~~d~vid-~~---g------~~~~~~~~~~~l~~~G~~v~~g  285 (364)
                      ...+.+|+|+. ..   +      +.+.++.+.++|+++|.++...
T Consensus       147 ~~~~~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~  192 (283)
T 2i7c_A          147 NVTNTYDVIIVDSSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQC  192 (283)
T ss_dssp             HCCSCEEEEEEECCCTTTGGGGGSSHHHHHHHHHHEEEEEEEEEEC
T ss_pred             hCCCCceEEEEcCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEC
Confidence            12567999884 32   1      1477889999999999998764

>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17

Probab=95.62  E-value=0.083  Score=46.95  Aligned_cols=98  Identities=17%  Similarity=0.191  Sum_probs=64.0

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHc-CC-------CeEEecCCCcccHHHHHHHHHHHc
Q 017916          180 GPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKEL-GA-------DNIVKVSTNLQDIAEEVEKIQKAM  251 (364)
Q Consensus       180 ~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~l-g~-------~~~~~~~~~~~~~~~~i~~~~~~~  251 (364)
                      .++.+||+.|+|. |..+..+++..+...+++++.+++-.+.+++. ..       ..+...   ..|..+.+..    .
T Consensus       107 ~~~~~VLdIG~G~-G~~~~~l~~~~~~~~v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv~~~---~~D~~~~l~~----~  178 (314)
T 2b2c_A          107 PDPKRVLIIGGGD-GGILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLF---CGDGFEFLKN----H  178 (314)
T ss_dssp             SSCCEEEEESCTT-SHHHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEE---CSCHHHHHHH----C
T ss_pred             CCCCEEEEEcCCc-CHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHhccccCCCCEEEE---EChHHHHHHh----c
Confidence            4568999998754 66777788776656899999999988888763 21       111111   1233333322    2


Q ss_pred             CCCccEEEECCCC----------HHHHHHHHHhcccCCEEEEEc
Q 017916          252 GTGIDVSFDCAGF----------NKTMSTALSATRAGGKVCLVG  285 (364)
Q Consensus       252 ~~~~d~vid~~g~----------~~~~~~~~~~l~~~G~~v~~g  285 (364)
                      .+.+|+||.....          .+.+..+.++|+++|.++.-.
T Consensus       179 ~~~fD~Ii~d~~~~~~~~~~l~t~~~l~~~~~~LkpgG~lv~~~  222 (314)
T 2b2c_A          179 KNEFDVIITDSSDPVGPAESLFGQSYYELLRDALKEDGILSSQG  222 (314)
T ss_dssp             TTCEEEEEECCC-------------HHHHHHHHEEEEEEEEEEC
T ss_pred             CCCceEEEEcCCCCCCcchhhhHHHHHHHHHhhcCCCeEEEEEC
Confidence            4679999843311          466788999999999998764

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}

Probab=95.61  E-value=0.14  Score=45.65  Aligned_cols=80  Identities=20%  Similarity=0.274  Sum_probs=49.1

Q ss_pred             CCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecC-----hhHHHHH----HHcCCC-eEEecCC-CcccHHHHHHHHHH
Q 017916          182 ETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVD-----DYRLSVA----KELGAD-NIVKVST-NLQDIAEEVEKIQK  249 (364)
Q Consensus       182 g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~-----~~~~~~~----~~lg~~-~~~~~~~-~~~~~~~~i~~~~~  249 (364)
                      +.++||+|+ |++|.+.++.+...|+ .|+++.++     .++.+.+    +..+.. ..+..|- ..+++.+.++++.+
T Consensus         5 ~k~vlVTGas~GIG~aia~~L~~~G~-~V~~~~r~~~~r~~~~~~~l~~~~~~~~~~~~~~~~Dvtd~~~v~~~~~~~~~   83 (324)
T 3u9l_A            5 KKIILITGASSGFGRLTAEALAGAGH-RVYASMRDIVGRNASNVEAIAGFARDNDVDLRTLELDVQSQVSVDRAIDQIIG   83 (324)
T ss_dssp             CCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESCTTTTTHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCC-EEEEecCcccccCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Confidence            578999998 9999999999999999 45655443     2333322    223432 2222222 22344444544443


Q ss_pred             HcCCCccEEEECCC
Q 017916          250 AMGTGIDVSFDCAG  263 (364)
Q Consensus       250 ~~~~~~d~vid~~g  263 (364)
                      .. +++|++|+++|
T Consensus        84 ~~-g~iD~lVnnAG   96 (324)
T 3u9l_A           84 ED-GRIDVLIHNAG   96 (324)
T ss_dssp             HH-SCCSEEEECCC
T ss_pred             Hc-CCCCEEEECCC
Confidence            33 47999999998

>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36

Probab=95.61  E-value=0.11  Score=42.75  Aligned_cols=98  Identities=12%  Similarity=0.005  Sum_probs=62.4

Q ss_pred             HHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHc-CC---------------C--eEEecCCC
Q 017916          175 RRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKEL-GA---------------D--NIVKVSTN  236 (364)
Q Consensus       175 ~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~l-g~---------------~--~~~~~~~~  236 (364)
                      ....+.++.+||..|+|. |..+..+++. |+ .|++++.+++..+.+++. +.               .  ..+.-+-.
T Consensus        16 ~~l~~~~~~~vLD~GCG~-G~~~~~la~~-g~-~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~   92 (203)
T 1pjz_A           16 SSLNVVPGARVLVPLCGK-SQDMSWLSGQ-GY-HVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFF   92 (203)
T ss_dssp             HHHCCCTTCEEEETTTCC-SHHHHHHHHH-CC-EEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCS
T ss_pred             HhcccCCCCEEEEeCCCC-cHhHHHHHHC-CC-eEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEECccc
Confidence            445677899999998765 6677778876 88 799999999988887653 21               1  11111111


Q ss_pred             cccHHHHHHHHHHHcCCCccEEEECCC----CH----HHHHHHHHhcccCCEEEEE
Q 017916          237 LQDIAEEVEKIQKAMGTGIDVSFDCAG----FN----KTMSTALSATRAGGKVCLV  284 (364)
Q Consensus       237 ~~~~~~~i~~~~~~~~~~~d~vid~~g----~~----~~~~~~~~~l~~~G~~v~~  284 (364)
                      .-++.+         .+.||+|++...    ..    ..++++.+.|+|+|+++.+
T Consensus        93 ~l~~~~---------~~~fD~v~~~~~l~~l~~~~~~~~l~~~~r~LkpgG~~~l~  139 (203)
T 1pjz_A           93 ALTARD---------IGHCAAFYDRAAMIALPADMRERYVQHLEALMPQACSGLLI  139 (203)
T ss_dssp             SSTHHH---------HHSEEEEEEESCGGGSCHHHHHHHHHHHHHHSCSEEEEEEE
T ss_pred             cCCccc---------CCCEEEEEECcchhhCCHHHHHHHHHHHHHHcCCCcEEEEE
Confidence            111110         136999997321    11    2567899999999994433

>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}

Probab=95.61  E-value=0.097  Score=44.36  Aligned_cols=104  Identities=15%  Similarity=0.190  Sum_probs=67.1

Q ss_pred             CCCCCEEEEEcCCHHHHHHHHHHHHCC-CCEEEEEecChhHHHHHHH----cCCCeEEecCCCcccHHHHHHHHHHHc--
Q 017916          179 IGPETNVLIMGAGPIGLVTMLGARAFG-APRIVIVDVDDYRLSVAKE----LGADNIVKVSTNLQDIAEEVEKIQKAM--  251 (364)
Q Consensus       179 ~~~g~~VLI~Gag~~G~~ai~la~~~g-~~~vv~~~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~i~~~~~~~--  251 (364)
                      ..++.+||-.|+|. |..++.+|+.+. ...+++++.+++..+.+++    .|...-+.+.  ..+..+.+..+....  
T Consensus        68 ~~~~~~VLeiG~G~-G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~--~gda~~~l~~l~~~~~~  144 (237)
T 3c3y_A           68 LVNAKKTIEVGVFT-GYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRKAGVEHKINFI--ESDAMLALDNLLQGQES  144 (237)
T ss_dssp             HTTCCEEEEECCTT-SHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEE--ESCHHHHHHHHHHSTTC
T ss_pred             hhCCCEEEEeCCCC-CHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEE--EcCHHHHHHHHHhccCC
Confidence            35678999998754 778888888864 3489999999988777654    3543211111  123333333332211  


Q ss_pred             CCCccEEEECCCC---HHHHHHHHHhcccCCEEEEEc
Q 017916          252 GTGIDVSFDCAGF---NKTMSTALSATRAGGKVCLVG  285 (364)
Q Consensus       252 ~~~~d~vid~~g~---~~~~~~~~~~l~~~G~~v~~g  285 (364)
                      ...+|+||-....   ...+..+.+.|++||.++.-.
T Consensus       145 ~~~fD~I~~d~~~~~~~~~l~~~~~~L~pGG~lv~d~  181 (237)
T 3c3y_A          145 EGSYDFGFVDADKPNYIKYHERLMKLVKVGGIVAYDN  181 (237)
T ss_dssp             TTCEEEEEECSCGGGHHHHHHHHHHHEEEEEEEEEEC
T ss_pred             CCCcCEEEECCchHHHHHHHHHHHHhcCCCeEEEEec
Confidence            3579999854332   356788899999999998754

>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*

Probab=95.60  E-value=0.16  Score=43.33  Aligned_cols=104  Identities=14%  Similarity=0.185  Sum_probs=66.6

Q ss_pred             CCCCCEEEEEcCCHHHHHHHHHHHHCC-CCEEEEEecChhHHHHHHH----cCCCeEEecCCCcccHHHHHHHHHHHc--
Q 017916          179 IGPETNVLIMGAGPIGLVTMLGARAFG-APRIVIVDVDDYRLSVAKE----LGADNIVKVSTNLQDIAEEVEKIQKAM--  251 (364)
Q Consensus       179 ~~~g~~VLI~Gag~~G~~ai~la~~~g-~~~vv~~~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~i~~~~~~~--  251 (364)
                      ..++.+||-.|+|. |..++.+|+.+. ...+++++.+++..+.+++    .|...-+.+.  ..+..+.+..+....  
T Consensus        77 ~~~~~~VLeiG~G~-G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~i~~~--~gda~~~l~~l~~~~~~  153 (247)
T 1sui_A           77 LINAKNTMEIGVYT-GYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGVDHKIDFR--EGPALPVLDEMIKDEKN  153 (247)
T ss_dssp             HTTCCEEEEECCGG-GHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTCGGGEEEE--ESCHHHHHHHHHHSGGG
T ss_pred             hhCcCEEEEeCCCc-CHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEE--ECCHHHHHHHHHhccCC
Confidence            34668999998754 778888998873 2389999999988777654    4542211111  123333333332111  


Q ss_pred             CCCccEEEECCC---CHHHHHHHHHhcccCCEEEEEc
Q 017916          252 GTGIDVSFDCAG---FNKTMSTALSATRAGGKVCLVG  285 (364)
Q Consensus       252 ~~~~d~vid~~g---~~~~~~~~~~~l~~~G~~v~~g  285 (364)
                      ...||+||-...   -...+..+.+.|++||.++.-.
T Consensus       154 ~~~fD~V~~d~~~~~~~~~l~~~~~~LkpGG~lv~d~  190 (247)
T 1sui_A          154 HGSYDFIFVDADKDNYLNYHKRLIDLVKVGGVIGYDN  190 (247)
T ss_dssp             TTCBSEEEECSCSTTHHHHHHHHHHHBCTTCCEEEEC
T ss_pred             CCCEEEEEEcCchHHHHHHHHHHHHhCCCCeEEEEec
Confidence            357999985332   2467778999999999998754

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*

Probab=95.60  E-value=0.062  Score=46.10  Aligned_cols=81  Identities=20%  Similarity=0.240  Sum_probs=49.3

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEec-ChhHHHH-HH---HcCCC-eEEecCCC-cccHHHHHHHHHHHcC
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDV-DDYRLSV-AK---ELGAD-NIVKVSTN-LQDIAEEVEKIQKAMG  252 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~-~~~~~~~-~~---~lg~~-~~~~~~~~-~~~~~~~i~~~~~~~~  252 (364)
                      .+.+|||+|+ |.+|.+.++.+...|+ .|+.+++ +.++.+. .+   ..+.. ..+..+-. .+++.+.++++.... 
T Consensus         6 ~~k~vlITGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-   83 (261)
T 1gee_A            6 EGKVVVITGSSTGLGKSMAIRFATEKA-KVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEF-   83 (261)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHH-
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEcCCChHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHc-
Confidence            4678999998 9999999998888999 5666666 5554332 22   22432 12222222 233333344333322 


Q ss_pred             CCccEEEECCC
Q 017916          253 TGIDVSFDCAG  263 (364)
Q Consensus       253 ~~~d~vid~~g  263 (364)
                      +++|++|+++|
T Consensus        84 g~id~li~~Ag   94 (261)
T 1gee_A           84 GKLDVMINNAG   94 (261)
T ss_dssp             SCCCEEEECCC
T ss_pred             CCCCEEEECCC
Confidence            37999999887

>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*

Probab=95.59  E-value=0.079  Score=46.26  Aligned_cols=107  Identities=12%  Similarity=0.023  Sum_probs=64.2

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHH-HHHHcCC---CeEEecCCCcccHHHHHHHHHHHcCCCcc
Q 017916          181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLS-VAKELGA---DNIVKVSTNLQDIAEEVEKIQKAMGTGID  256 (364)
Q Consensus       181 ~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~-~~~~lg~---~~~~~~~~~~~~~~~~i~~~~~~~~~~~d  256 (364)
                      .+.+++|.|+|++|.+++..+...|+..|.++.++.++.+ ++++++.   .....+++           +    ..++|
T Consensus       125 ~~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~~~~~~~~~~~~~~-----------l----~~~aD  189 (281)
T 3o8q_A          125 KGATILLIGAGGAARGVLKPLLDQQPASITVTNRTFAKAEQLAELVAAYGEVKAQAFEQ-----------L----KQSYD  189 (281)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHTTCCSEEEEEESSHHHHHHHHHHHGGGSCEEEEEGGG-----------C----CSCEE
T ss_pred             cCCEEEEECchHHHHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhccCCeeEeeHHH-----------h----cCCCC
Confidence            6789999999999999998888899877888888887754 4455542   12222211           0    25799


Q ss_pred             EEEECCCCHHHHHH---HHHhcccCCEEEEEcCCCCCccccchhhhhcCc
Q 017916          257 VSFDCAGFNKTMST---ALSATRAGGKVCLVGMGHHEMTVPLTPAAVREV  303 (364)
Q Consensus       257 ~vid~~g~~~~~~~---~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~  303 (364)
                      +||+|+..+..-..   ....++++..++++..... ....+...-.+++
T Consensus       190 iIInaTp~gm~~~~~~l~~~~l~~~~~V~DlvY~P~-~T~ll~~A~~~G~  238 (281)
T 3o8q_A          190 VIINSTSASLDGELPAIDPVIFSSRSVCYDMMYGKG-YTVFNQWARQHGC  238 (281)
T ss_dssp             EEEECSCCCC----CSCCGGGEEEEEEEEESCCCSS-CCHHHHHHHHTTC
T ss_pred             EEEEcCcCCCCCCCCCCCHHHhCcCCEEEEecCCCc-cCHHHHHHHHCCC
Confidence            99999875321110   1234555555555543322 2233334444554

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}

Probab=95.58  E-value=0.045  Score=47.01  Aligned_cols=76  Identities=18%  Similarity=0.214  Sum_probs=48.0

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCC-CcccHHHHHHHHHHHcCCCccEE
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVST-NLQDIAEEVEKIQKAMGTGIDVS  258 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~-~~~~~~~~i~~~~~~~~~~~d~v  258 (364)
                      .+.++||+|+ |.+|.+.++.+...|+ .|+.++++.++.+.      ...+..|- ..+++.+.++...+. -+++|++
T Consensus        20 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~------~~~~~~Dl~d~~~v~~~~~~~~~~-~g~iD~l   91 (253)
T 2nm0_A           20 MSRSVLVTGGNRGIGLAIARAFADAGD-KVAITYRSGEPPEG------FLAVKCDITDTEQVEQAYKEIEET-HGPVEVL   91 (253)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSSCCCTT------SEEEECCTTSHHHHHHHHHHHHHH-TCSCSEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCChHhhcc------ceEEEecCCCHHHHHHHHHHHHHH-cCCCCEE
Confidence            4678999998 9999999999999999 56666665543221      12222222 223333344444332 3579999


Q ss_pred             EECCCC
Q 017916          259 FDCAGF  264 (364)
Q Consensus       259 id~~g~  264 (364)
                      |+++|.
T Consensus        92 v~nAg~   97 (253)
T 2nm0_A           92 IANAGV   97 (253)
T ss_dssp             EEECSC
T ss_pred             EECCCC
Confidence            998873

>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*

Probab=95.58  E-value=0.067  Score=47.34  Aligned_cols=100  Identities=21%  Similarity=0.251  Sum_probs=64.5

Q ss_pred             CCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcC--------CCeEEecCCCcccHHHHHHHHHH
Q 017916          178 NIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELG--------ADNIVKVSTNLQDIAEEVEKIQK  249 (364)
Q Consensus       178 ~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg--------~~~~~~~~~~~~~~~~~i~~~~~  249 (364)
                      ...++.+||+.|+|. |..+..+++..+...+++++.+++-.+.+++.-        ...+..+   ..|..+.+    .
T Consensus        92 ~~~~~~~VLdiG~G~-G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~rv~v~---~~Da~~~l----~  163 (304)
T 2o07_A           92 SHPNPRKVLIIGGGD-GGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLH---VGDGFEFM----K  163 (304)
T ss_dssp             TSSSCCEEEEEECTT-SHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEE---ESCHHHHH----H
T ss_pred             hCCCCCEEEEECCCc-hHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEE---ECcHHHHH----h
Confidence            345678999998754 667777887766568999999998888776521        1111111   12322222    1


Q ss_pred             HcCCCccEEE-ECCC---------CHHHHHHHHHhcccCCEEEEEc
Q 017916          250 AMGTGIDVSF-DCAG---------FNKTMSTALSATRAGGKVCLVG  285 (364)
Q Consensus       250 ~~~~~~d~vi-d~~g---------~~~~~~~~~~~l~~~G~~v~~g  285 (364)
                      ...+.+|+|| |...         ..+.++.+.++|+++|.++...
T Consensus       164 ~~~~~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~  209 (304)
T 2o07_A          164 QNQDAFDVIITDSSDPMGPAESLFKESYYQLMKTALKEDGVLCCQG  209 (304)
T ss_dssp             TCSSCEEEEEEECC-----------CHHHHHHHHHEEEEEEEEEEE
T ss_pred             hCCCCceEEEECCCCCCCcchhhhHHHHHHHHHhccCCCeEEEEec
Confidence            2246799998 4332         1346788999999999998754

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*

Probab=95.58  E-value=0.1  Score=45.25  Aligned_cols=81  Identities=14%  Similarity=0.186  Sum_probs=49.1

Q ss_pred             CCCEEEEEcC---CHHHHHHHHHHHHCCCCEEEEEecChh---HHHHH-HHcCCCeEEecCCC-cccHHHHHHHHHHHcC
Q 017916          181 PETNVLIMGA---GPIGLVTMLGARAFGAPRIVIVDVDDY---RLSVA-KELGADNIVKVSTN-LQDIAEEVEKIQKAMG  252 (364)
Q Consensus       181 ~g~~VLI~Ga---g~~G~~ai~la~~~g~~~vv~~~~~~~---~~~~~-~~lg~~~~~~~~~~-~~~~~~~i~~~~~~~~  252 (364)
                      .+.++||+|+   |++|.+.++.+...|+ .|+.++++.+   ..+.+ +..+....+..+-. .+++.+.++.+... -
T Consensus         5 ~~k~vlVTGas~~~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~-~   82 (275)
T 2pd4_A            5 KGKKGLIVGVANNKSIAYGIAQSCFNQGA-TLAFTYLNESLEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKD-L   82 (275)
T ss_dssp             TTCEEEEECCCSTTSHHHHHHHHHHTTTC-EEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHH-T
T ss_pred             CCCEEEEECCCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEcCCCCHHHHHHHHHHHHHH-c
Confidence            4678999985   6899999999988999 5666666654   22222 23342223332222 23333334333332 3


Q ss_pred             CCccEEEECCC
Q 017916          253 TGIDVSFDCAG  263 (364)
Q Consensus       253 ~~~d~vid~~g  263 (364)
                      +++|++|+++|
T Consensus        83 g~id~lv~nAg   93 (275)
T 2pd4_A           83 GSLDFIVHSVA   93 (275)
T ss_dssp             SCEEEEEECCC
T ss_pred             CCCCEEEECCc
Confidence            47999999887

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=95.58  E-value=0.07  Score=46.32  Aligned_cols=82  Identities=22%  Similarity=0.263  Sum_probs=51.1

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHH-HHc---C---CC-eEEecCC-CcccHHHHHHHHHHH
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KEL---G---AD-NIVKVST-NLQDIAEEVEKIQKA  250 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~-~~l---g---~~-~~~~~~~-~~~~~~~~i~~~~~~  250 (364)
                      .+.++||+|+ |.+|.+.++.+...|+ .|+.++++.++.+.+ +++   .   .. ..+..|- ..+++.+.++.....
T Consensus         5 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   83 (278)
T 1spx_A            5 AEKVAIITGSSNGIGRATAVLFAREGA-KVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLGK   83 (278)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcccCCCceeEEecccCCHHHHHHHHHHHHHH
Confidence            4678999998 9999999999888999 577777777665433 333   2   11 1222222 223333344443332


Q ss_pred             cCCCccEEEECCCC
Q 017916          251 MGTGIDVSFDCAGF  264 (364)
Q Consensus       251 ~~~~~d~vid~~g~  264 (364)
                      . +++|++|+++|.
T Consensus        84 ~-g~id~lv~~Ag~   96 (278)
T 1spx_A           84 F-GKLDILVNNAGA   96 (278)
T ss_dssp             H-SCCCEEEECCC-
T ss_pred             c-CCCCEEEECCCC
Confidence            2 479999999873

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}

Probab=95.57  E-value=0.047  Score=45.65  Aligned_cols=94  Identities=17%  Similarity=0.258  Sum_probs=57.7

Q ss_pred             CEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcCCCccEEEEC
Q 017916          183 TNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDC  261 (364)
Q Consensus       183 ~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid~  261 (364)
                      .+|||+|+ |.+|...++.+...|. .|++++++.++.+.+. -++ ..+..+-  .+ .+.+.+..    .++|+||.+
T Consensus         5 ~~ilItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~-~~~-~~~~~Dl--~d-~~~~~~~~----~~~d~vi~~   74 (227)
T 3dhn_A            5 KKIVLIGASGFVGSALLNEALNRGF-EVTAVVRHPEKIKIEN-EHL-KVKKADV--SS-LDEVCEVC----KGADAVISA   74 (227)
T ss_dssp             CEEEEETCCHHHHHHHHHHHHTTTC-EEEEECSCGGGCCCCC-TTE-EEECCCT--TC-HHHHHHHH----TTCSEEEEC
T ss_pred             CEEEEEcCCchHHHHHHHHHHHCCC-EEEEEEcCcccchhcc-Cce-EEEEecC--CC-HHHHHHHh----cCCCEEEEe
Confidence            58999998 9999999999999998 6788877766532111 111 1222111  12 22333333    369999999


Q ss_pred             CCCH-----------HHHHHHHHhcccC--CEEEEEcC
Q 017916          262 AGFN-----------KTMSTALSATRAG--GKVCLVGM  286 (364)
Q Consensus       262 ~g~~-----------~~~~~~~~~l~~~--G~~v~~g~  286 (364)
                      +|..           .....+++.+...  .+++.++.
T Consensus        75 a~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss  112 (227)
T 3dhn_A           75 FNPGWNNPDIYDETIKVYLTIIDGVKKAGVNRFLMVGG  112 (227)
T ss_dssp             CCC------CCSHHHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred             CcCCCCChhHHHHHHHHHHHHHHHHHHhCCCEEEEeCC
Confidence            8853           2233455555543  47888763

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}

Probab=95.54  E-value=0.091  Score=46.69  Aligned_cols=82  Identities=21%  Similarity=0.231  Sum_probs=50.2

Q ss_pred             CCCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecC------------hhHHH----HHHHcCCCe-EEecCC-CcccH
Q 017916          180 GPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVD------------DYRLS----VAKELGADN-IVKVST-NLQDI  240 (364)
Q Consensus       180 ~~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~------------~~~~~----~~~~lg~~~-~~~~~~-~~~~~  240 (364)
                      -.|.++||+|+ +++|.+.++.+...|+ .|++++.+            .++.+    .++..+... .+..|- ..+++
T Consensus        44 l~gk~~lVTGas~GIG~aia~~la~~G~-~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v  122 (317)
T 3oec_A           44 LQGKVAFITGAARGQGRTHAVRLAQDGA-DIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRRIIARQADVRDLASL  122 (317)
T ss_dssp             TTTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHH
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCC-eEEEEecccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHH
Confidence            35789999998 9999999999999999 56666543            33322    223344332 222222 22334


Q ss_pred             HHHHHHHHHHcCCCccEEEECCC
Q 017916          241 AEEVEKIQKAMGTGIDVSFDCAG  263 (364)
Q Consensus       241 ~~~i~~~~~~~~~~~d~vid~~g  263 (364)
                      .+.++.+.+.. +++|++|+++|
T Consensus       123 ~~~~~~~~~~~-g~iD~lVnnAg  144 (317)
T 3oec_A          123 QAVVDEALAEF-GHIDILVSNVG  144 (317)
T ss_dssp             HHHHHHHHHHH-SCCCEEEECCC
T ss_pred             HHHHHHHHHHc-CCCCEEEECCC
Confidence            44444443332 47999999987

>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3

Probab=95.54  E-value=0.051  Score=51.00  Aligned_cols=93  Identities=20%  Similarity=0.225  Sum_probs=68.6

Q ss_pred             CCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcCCCccEE
Q 017916          179 IGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVS  258 (364)
Q Consensus       179 ~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~v  258 (364)
                      .-.|.+|.|.|.|.+|..+++.++.+|+ .|++++.+..+.......|+..        .+    +.++    -...|++
T Consensus       254 ~l~GktVgIIG~G~IG~~vA~~l~~~G~-~Viv~d~~~~~~~~a~~~g~~~--------~~----l~el----l~~aDiV  316 (479)
T 1v8b_A          254 LISGKIVVICGYGDVGKGCASSMKGLGA-RVYITEIDPICAIQAVMEGFNV--------VT----LDEI----VDKGDFF  316 (479)
T ss_dssp             CCTTSEEEEECCSHHHHHHHHHHHHHTC-EEEEECSCHHHHHHHHTTTCEE--------CC----HHHH----TTTCSEE
T ss_pred             ccCCCEEEEEeeCHHHHHHHHHHHhCcC-EEEEEeCChhhHHHHHHcCCEe--------cC----HHHH----HhcCCEE
Confidence            4578999999999999999999999999 7899988877654444556521        12    2222    2468999


Q ss_pred             EECCCCHHHH-HHHHHhcccCCEEEEEcCCC
Q 017916          259 FDCAGFNKTM-STALSATRAGGKVCLVGMGH  288 (364)
Q Consensus       259 id~~g~~~~~-~~~~~~l~~~G~~v~~g~~~  288 (364)
                      +-+.+....+ ...++.|+++..++.++...
T Consensus       317 i~~~~t~~lI~~~~l~~MK~gailiNvgrg~  347 (479)
T 1v8b_A          317 ITCTGNVDVIKLEHLLKMKNNAVVGNIGHFD  347 (479)
T ss_dssp             EECCSSSSSBCHHHHTTCCTTCEEEECSSTT
T ss_pred             EECCChhhhcCHHHHhhcCCCcEEEEeCCCC
Confidence            9987654444 35778899999999987543

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}

Probab=95.54  E-value=0.053  Score=45.64  Aligned_cols=76  Identities=18%  Similarity=0.187  Sum_probs=50.0

Q ss_pred             EEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHH-HHcCCC-eEEecCCCcccHHHHHHHHHHHcCCCccEEEE
Q 017916          184 NVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KELGAD-NIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  260 (364)
Q Consensus       184 ~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~-~~lg~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid  260 (364)
                      ++||+|+ +++|.+.+..+...|++ |+.++++.++.+.+ ++++.. ..+..+-.  + .+.++++.+.....+|++|+
T Consensus         3 ~vlVTGas~gIG~~~a~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~--~-~~~v~~~~~~~~~~~d~lv~   78 (230)
T 3guy_A            3 LIVITGASSGLGAELAKLYDAEGKA-TYLTGRSESKLSTVTNCLSNNVGYRARDLA--S-HQEVEQLFEQLDSIPSTVVH   78 (230)
T ss_dssp             CEEEESTTSHHHHHHHHHHHHTTCC-EEEEESCHHHHHHHHHTCSSCCCEEECCTT--C-HHHHHHHHHSCSSCCSEEEE
T ss_pred             EEEEecCCchHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHHhhccCeEeecCC--C-HHHHHHHHHHHhhcCCEEEE
Confidence            6899998 99999999999999995 67777777776554 344422 12222221  1 23455554434455699999


Q ss_pred             CCC
Q 017916          261 CAG  263 (364)
Q Consensus       261 ~~g  263 (364)
                      ++|
T Consensus        79 ~Ag   81 (230)
T 3guy_A           79 SAG   81 (230)
T ss_dssp             CCC
T ss_pred             eCC
Confidence            987

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*

Probab=95.53  E-value=0.06  Score=45.98  Aligned_cols=82  Identities=23%  Similarity=0.285  Sum_probs=50.1

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecC-hhHHH-HHHHc---CCC-eEEecCC-CcccHHHHHHHHHHHcC
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVD-DYRLS-VAKEL---GAD-NIVKVST-NLQDIAEEVEKIQKAMG  252 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~-~~~~~-~~~~l---g~~-~~~~~~~-~~~~~~~~i~~~~~~~~  252 (364)
                      .+.++||+|+ |.+|.+.++.+...|+ .|+.++++ .++.+ ..+++   +.. ..+..+- ..+++.+.++++.... 
T Consensus         6 ~~k~vlVTGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-   83 (258)
T 3afn_B            6 KGKRVLITGSSQGIGLATARLFARAGA-KVGLHGRKAPANIDETIASMRADGGDAAFFAADLATSEACQQLVDEFVAKF-   83 (258)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCCTTHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHH-
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEECCCchhhHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHc-
Confidence            4678999998 9999999999988999 56666666 44433 22222   322 1222222 2233344444443322 


Q ss_pred             CCccEEEECCCC
Q 017916          253 TGIDVSFDCAGF  264 (364)
Q Consensus       253 ~~~d~vid~~g~  264 (364)
                      +++|++|+++|.
T Consensus        84 g~id~vi~~Ag~   95 (258)
T 3afn_B           84 GGIDVLINNAGG   95 (258)
T ss_dssp             SSCSEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            479999999874

>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*

Probab=95.53  E-value=0.044  Score=48.34  Aligned_cols=98  Identities=16%  Similarity=0.155  Sum_probs=63.1

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcC--------CCeEEecCCCcccHHHHHHHHHHHc
Q 017916          180 GPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELG--------ADNIVKVSTNLQDIAEEVEKIQKAM  251 (364)
Q Consensus       180 ~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg--------~~~~~~~~~~~~~~~~~i~~~~~~~  251 (364)
                      ..+.+||+.|+|. |..+..+++..+...+++++.+++..+.+++.-        ...+....   .|..+    +....
T Consensus        89 ~~~~~VLdiG~G~-G~~~~~l~~~~~~~~v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~~---~D~~~----~l~~~  160 (296)
T 1inl_A           89 PNPKKVLIIGGGD-GGTLREVLKHDSVEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVI---ANGAE----YVRKF  160 (296)
T ss_dssp             SSCCEEEEEECTT-CHHHHHHTTSTTCSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEE---SCHHH----HGGGC
T ss_pred             CCCCEEEEEcCCc-CHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccCCCceEEEE---CcHHH----HHhhC
Confidence            3458999998754 567777777766668999999998888776521        11111111   23222    21112


Q ss_pred             CCCccEEEE-CCC----------CHHHHHHHHHhcccCCEEEEEc
Q 017916          252 GTGIDVSFD-CAG----------FNKTMSTALSATRAGGKVCLVG  285 (364)
Q Consensus       252 ~~~~d~vid-~~g----------~~~~~~~~~~~l~~~G~~v~~g  285 (364)
                      ...+|+|+- ...          ..+.+..+.+.|+++|.++...
T Consensus       161 ~~~fD~Ii~d~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~  205 (296)
T 1inl_A          161 KNEFDVIIIDSTDPTAGQGGHLFTEEFYQACYDALKEDGVFSAET  205 (296)
T ss_dssp             SSCEEEEEEEC----------CCSHHHHHHHHHHEEEEEEEEEEC
T ss_pred             CCCceEEEEcCCCcccCchhhhhHHHHHHHHHHhcCCCcEEEEEc
Confidence            457999883 321          1467788999999999999864

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*

Probab=95.53  E-value=0.083  Score=45.52  Aligned_cols=81  Identities=17%  Similarity=0.203  Sum_probs=48.4

Q ss_pred             CCCEEEEEcC---CHHHHHHHHHHHHCCCCEEEEEecCh---hHHHHH-HHcCCCeEEecCCCc-ccHHHHHHHHHHHcC
Q 017916          181 PETNVLIMGA---GPIGLVTMLGARAFGAPRIVIVDVDD---YRLSVA-KELGADNIVKVSTNL-QDIAEEVEKIQKAMG  252 (364)
Q Consensus       181 ~g~~VLI~Ga---g~~G~~ai~la~~~g~~~vv~~~~~~---~~~~~~-~~lg~~~~~~~~~~~-~~~~~~i~~~~~~~~  252 (364)
                      .+.++||+|+   |.+|.+.++.+...|+ .|+.++++.   +..+.+ +..+....+..|-.+ +++.+.++..... -
T Consensus         8 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~-~   85 (265)
T 1qsg_A            8 SGKRILVTGVASKLSIAYGIAQAMHREGA-ELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKV-W   85 (265)
T ss_dssp             TTCEEEECCCCSTTSHHHHHHHHHHHTTC-EEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTT-C
T ss_pred             CCCEEEEECCCCCCCHHHHHHHHHHHCCC-EEEEEcCcHHHHHHHHHHHHhcCCcEEEEccCCCHHHHHHHHHHHHHH-c
Confidence            4678999985   5899999999988999 566666655   222222 223432333333222 2333333333322 2


Q ss_pred             CCccEEEECCC
Q 017916          253 TGIDVSFDCAG  263 (364)
Q Consensus       253 ~~~d~vid~~g  263 (364)
                      +++|++|+++|
T Consensus        86 g~iD~lv~~Ag   96 (265)
T 1qsg_A           86 PKFDGFVHSIG   96 (265)
T ss_dssp             SSEEEEEECCC
T ss_pred             CCCCEEEECCC
Confidence            47999999887

>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}

Probab=95.52  E-value=0.098  Score=45.10  Aligned_cols=100  Identities=15%  Similarity=0.165  Sum_probs=68.1

Q ss_pred             HHHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHc----CCC---eEEecCCCcccHHHHHHH
Q 017916          174 CRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKEL----GAD---NIVKVSTNLQDIAEEVEK  246 (364)
Q Consensus       174 l~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~l----g~~---~~~~~~~~~~~~~~~i~~  246 (364)
                      ++...++++++||-.|+|. |..+..+++..+. .+++++.+++..+.+++.    |..   .+...+....+       
T Consensus        54 ~~~~~~~~~~~vLDiGcG~-G~~~~~l~~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~-------  124 (273)
T 3bus_A           54 IALLDVRSGDRVLDVGCGI-GKPAVRLATARDV-RVTGISISRPQVNQANARATAAGLANRVTFSYADAMDLP-------  124 (273)
T ss_dssp             HHHSCCCTTCEEEEESCTT-SHHHHHHHHHSCC-EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCC-------
T ss_pred             HHhcCCCCCCEEEEeCCCC-CHHHHHHHHhcCC-EEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECccccCC-------
Confidence            4667788999999999765 7788888888887 799999998877766542    432   12221111100       


Q ss_pred             HHHHcCCCccEEEECC-----C-CHHHHHHHHHhcccCCEEEEEc
Q 017916          247 IQKAMGTGIDVSFDCA-----G-FNKTMSTALSATRAGGKVCLVG  285 (364)
Q Consensus       247 ~~~~~~~~~d~vid~~-----g-~~~~~~~~~~~l~~~G~~v~~g  285 (364)
                         ...+.+|+|+...     . ....+..+.+.|+|+|+++...
T Consensus       125 ---~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~  166 (273)
T 3bus_A          125 ---FEDASFDAVWALESLHHMPDRGRALREMARVLRPGGTVAIAD  166 (273)
T ss_dssp             ---SCTTCEEEEEEESCTTTSSCHHHHHHHHHTTEEEEEEEEEEE
T ss_pred             ---CCCCCccEEEEechhhhCCCHHHHHHHHHHHcCCCeEEEEEE
Confidence               0135799998532     1 2457788999999999998765

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*

Probab=95.52  E-value=0.1  Score=45.75  Aligned_cols=82  Identities=17%  Similarity=0.092  Sum_probs=51.6

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEe-cChhHHHHH-H----HcCCCe-EEecCCC-cc-------------
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVD-VDDYRLSVA-K----ELGADN-IVKVSTN-LQ-------------  238 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~-~~~~~~~~~-~----~lg~~~-~~~~~~~-~~-------------  238 (364)
                      .+.++||+|+ +++|.+.++.+...|+ .|+.++ ++.++.+.+ +    ..+... .+..+-. .+             
T Consensus         8 ~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   86 (291)
T 1e7w_A            8 TVPVALVTGAAKRLGRSIAEGLHAEGY-AVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPV   86 (291)
T ss_dssp             CCCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----CCCB
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEcCCCHHHHHHHHHHHhhhcCCeeEEEEeecCCccccccccccccccc
Confidence            4678999998 9999999999999999 567777 776554332 2    224221 2222211 22             


Q ss_pred             ----cHHHHHHHHHHHcCCCccEEEECCCC
Q 017916          239 ----DIAEEVEKIQKAMGTGIDVSFDCAGF  264 (364)
Q Consensus       239 ----~~~~~i~~~~~~~~~~~d~vid~~g~  264 (364)
                          ++.+.++.+.... +++|++|+++|.
T Consensus        87 ~~~~~v~~~~~~~~~~~-g~iD~lvnnAg~  115 (291)
T 1e7w_A           87 TLFTRCAELVAACYTHW-GRCDVLVNNASS  115 (291)
T ss_dssp             CHHHHHHHHHHHHHHHH-SCCCEEEECCCC
T ss_pred             chHHHHHHHHHHHHHhc-CCCCEEEECCCC
Confidence                4444444443333 479999999873

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A

Probab=95.51  E-value=0.072  Score=45.96  Aligned_cols=75  Identities=20%  Similarity=0.277  Sum_probs=47.6

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCC-CcccHHHHHHHHHHHcCCCccEE
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVST-NLQDIAEEVEKIQKAMGTGIDVS  258 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~-~~~~~~~~i~~~~~~~~~~~d~v  258 (364)
                      .+.++||+|+ |.+|.+.++.+...|+ .|++++++.++     .-.+ ..+..+- ..+++.+.++.+.+.. +++|++
T Consensus         7 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~-----~~~~-~~~~~Dl~~~~~v~~~~~~~~~~~-g~iD~l   78 (264)
T 2dtx_A            7 RDKVVIVTGASMGIGRAIAERFVDEGS-KVIDLSIHDPG-----EAKY-DHIECDVTNPDQVKASIDHIFKEY-GSISVL   78 (264)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESSCCC-----SCSS-EEEECCTTCHHHHHHHHHHHHHHH-SCCCEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEecCccc-----CCce-EEEEecCCCHHHHHHHHHHHHHHc-CCCCEE
Confidence            4678999998 9999999999999999 56666665544     1111 2222221 2233334444443322 479999


Q ss_pred             EECCC
Q 017916          259 FDCAG  263 (364)
Q Consensus       259 id~~g  263 (364)
                      |+++|
T Consensus        79 v~~Ag   83 (264)
T 2dtx_A           79 VNNAG   83 (264)
T ss_dssp             EECCC
T ss_pred             EECCC
Confidence            99987

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}

Probab=95.50  E-value=0.11  Score=45.20  Aligned_cols=81  Identities=19%  Similarity=0.217  Sum_probs=48.9

Q ss_pred             CCCEEEEEcC---CHHHHHHHHHHHHCCCCEEEEEecChh---HHHHH-HHcCCCeEEecCCC-cccHHHHHHHHHHHcC
Q 017916          181 PETNVLIMGA---GPIGLVTMLGARAFGAPRIVIVDVDDY---RLSVA-KELGADNIVKVSTN-LQDIAEEVEKIQKAMG  252 (364)
Q Consensus       181 ~g~~VLI~Ga---g~~G~~ai~la~~~g~~~vv~~~~~~~---~~~~~-~~lg~~~~~~~~~~-~~~~~~~i~~~~~~~~  252 (364)
                      .+.++||+|+   |.+|.+.++.+...|+ .|+.++++.+   ..+.+ ...+....+..+-. .+++.+.++..... -
T Consensus        20 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~-~   97 (285)
T 2p91_A           20 EGKRALITGVANERSIAYGIAKSFHREGA-QLAFTYATPKLEKRVREIAKGFGSDLVVKCDVSLDEDIKNLKKFLEEN-W   97 (285)
T ss_dssp             TTCEEEECCCSSTTSHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHH-T
T ss_pred             CCCEEEEECCCCCCcHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHH-c
Confidence            4678999986   5899999998888999 5666666654   22222 22342223322222 23333334433332 3


Q ss_pred             CCccEEEECCC
Q 017916          253 TGIDVSFDCAG  263 (364)
Q Consensus       253 ~~~d~vid~~g  263 (364)
                      +++|++|+++|
T Consensus        98 g~iD~lv~~Ag  108 (285)
T 2p91_A           98 GSLDIIVHSIA  108 (285)
T ss_dssp             SCCCEEEECCC
T ss_pred             CCCCEEEECCC
Confidence            47999999987

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}

Probab=95.50  E-value=0.068  Score=45.36  Aligned_cols=82  Identities=21%  Similarity=0.295  Sum_probs=47.9

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEE-ecChhHHHH----HHHcCCCe-EEecCCC-cccHHHHHHHHHHHcC
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIV-DVDDYRLSV----AKELGADN-IVKVSTN-LQDIAEEVEKIQKAMG  252 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~-~~~~~~~~~----~~~lg~~~-~~~~~~~-~~~~~~~i~~~~~~~~  252 (364)
                      .+.++||+|+ |.+|.+.++.+...|++ |+++ .+++++.+.    ++..+... .+..+-. .+++.+.++.+.+.. 
T Consensus         4 ~~~~vlItGasggiG~~~a~~l~~~G~~-V~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-   81 (247)
T 2hq1_A            4 KGKTAIVTGSSRGLGKAIAWKLGNMGAN-IVLNGSPASTSLDATAEEFKAAGINVVVAKGDVKNPEDVENMVKTAMDAF-   81 (247)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCE-EEEEECTTCSHHHHHHHHHHHTTCCEEEEESCTTSHHHHHHHHHHHHHHH-
T ss_pred             CCcEEEEECCCchHHHHHHHHHHHCCCE-EEEEcCcCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHhc-
Confidence            4678999998 99999999999999994 5555 455444332    22334322 2222222 223333333333322 


Q ss_pred             CCccEEEECCCC
Q 017916          253 TGIDVSFDCAGF  264 (364)
Q Consensus       253 ~~~d~vid~~g~  264 (364)
                      +++|++|+++|.
T Consensus        82 ~~~d~vi~~Ag~   93 (247)
T 2hq1_A           82 GRIDILVNNAGI   93 (247)
T ss_dssp             SCCCEEEECC--
T ss_pred             CCCCEEEECCCC
Confidence            479999999874

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}

Probab=95.49  E-value=0.058  Score=46.29  Aligned_cols=79  Identities=19%  Similarity=0.367  Sum_probs=48.2

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCe-EEecCCC-cccHHHHHHHHHHHcCCCccE
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADN-IVKVSTN-LQDIAEEVEKIQKAMGTGIDV  257 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~-~~~~~~~-~~~~~~~i~~~~~~~~~~~d~  257 (364)
                      .+.++||+|+ +++|.+.++.+...|+ .|+.+++..+  +..++++... .+..|-. .+++.+.++...+  -+++|+
T Consensus         8 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~--~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~--~g~id~   82 (257)
T 3tl3_A            8 RDAVAVVTGGASGLGLATTKRLLDAGA-QVVVLDIRGE--DVVADLGDRARFAAADVTDEAAVASALDLAET--MGTLRI   82 (257)
T ss_dssp             --CEEEEETTTSHHHHHHHHHHHHHTC-EEEEEESSCH--HHHHHTCTTEEEEECCTTCHHHHHHHHHHHHH--HSCEEE
T ss_pred             cCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCchH--HHHHhcCCceEEEECCCCCHHHHHHHHHHHHH--hCCCCE
Confidence            4678999998 9999999998888999 5666666433  3344555432 2222222 2333333333322  347999


Q ss_pred             EEECCCC
Q 017916          258 SFDCAGF  264 (364)
Q Consensus       258 vid~~g~  264 (364)
                      +|+++|.
T Consensus        83 lv~nAg~   89 (257)
T 3tl3_A           83 VVNCAGT   89 (257)
T ss_dssp             EEECGGG
T ss_pred             EEECCCC
Confidence            9999883

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}

Probab=95.49  E-value=0.084  Score=45.59  Aligned_cols=79  Identities=16%  Similarity=0.193  Sum_probs=49.8

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHH-HHHc---CC-Ce--EEecCCCcccHHHHHHHHHHHcC
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSV-AKEL---GA-DN--IVKVSTNLQDIAEEVEKIQKAMG  252 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~-~~~l---g~-~~--~~~~~~~~~~~~~~i~~~~~~~~  252 (364)
                      .+.++||+|+ +++|.+.++.+...|+ .|+.++++.++.+. .+++   +. ..  .+..+-.+   .+.++++.+. -
T Consensus         9 ~~k~~lVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~---~~~~~~~~~~-~   83 (267)
T 3t4x_A            9 KGKTALVTGSTAGIGKAIATSLVAEGA-NVLINGRREENVNETIKEIRAQYPDAILQPVVADLGT---EQGCQDVIEK-Y   83 (267)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTS---HHHHHHHHHH-C
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCC---HHHHHHHHHh-c
Confidence            4678999998 9999999999989999 57777777765432 2222   21 11  12222221   2234444333 2


Q ss_pred             CCccEEEECCCC
Q 017916          253 TGIDVSFDCAGF  264 (364)
Q Consensus       253 ~~~d~vid~~g~  264 (364)
                      +++|++|+++|.
T Consensus        84 g~id~lv~nAg~   95 (267)
T 3t4x_A           84 PKVDILINNLGI   95 (267)
T ss_dssp             CCCSEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            479999999883

>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*

Probab=95.48  E-value=0.12  Score=45.89  Aligned_cols=82  Identities=16%  Similarity=0.155  Sum_probs=52.1

Q ss_pred             HHHHcCC-CCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecC---hhHHHH-HHHc----CCC-eEEecCCCcccHHH
Q 017916          173 ACRRANI-GPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVD---DYRLSV-AKEL----GAD-NIVKVSTNLQDIAE  242 (364)
Q Consensus       173 ~l~~~~~-~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~---~~~~~~-~~~l----g~~-~~~~~~~~~~~~~~  242 (364)
                      +|+...+ -.+.++||+|+|++|.+++..+...|++.|+++.++   .++.+. ++++    +.. ....+++    + +
T Consensus       144 ~L~~~~~~l~gk~~lVlGaGG~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~la~~~~~~~~~~~~~~~~~~----~-~  218 (315)
T 3tnl_A          144 ALKEAGHDIIGKKMTICGAGGAATAICIQAALDGVKEISIFNRKDDFYANAEKTVEKINSKTDCKAQLFDIED----H-E  218 (315)
T ss_dssp             HHHHTTCCCTTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTC----H-H
T ss_pred             HHHHcCCCccCCEEEEECCChHHHHHHHHHHHCCCCEEEEEECCCchHHHHHHHHHHhhhhcCCceEEeccch----H-H
Confidence            3444333 367899999999999999999999999778888887   555443 3333    321 2233321    1 1


Q ss_pred             HHHHHHHHcCCCccEEEECCC
Q 017916          243 EVEKIQKAMGTGIDVSFDCAG  263 (364)
Q Consensus       243 ~i~~~~~~~~~~~d~vid~~g  263 (364)
                      .+.+..    ..+|+||+|+.
T Consensus       219 ~l~~~l----~~aDiIINaTp  235 (315)
T 3tnl_A          219 QLRKEI----AESVIFTNATG  235 (315)
T ss_dssp             HHHHHH----HTCSEEEECSS
T ss_pred             HHHhhh----cCCCEEEECcc
Confidence            122221    36899999876

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2

Probab=95.47  E-value=0.097  Score=46.79  Aligned_cols=82  Identities=17%  Similarity=0.080  Sum_probs=51.5

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEe-cChhHHHHH-HH----cCCC-eEEecCCC-cc-------------
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVD-VDDYRLSVA-KE----LGAD-NIVKVSTN-LQ-------------  238 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~-~~~~~~~~~-~~----lg~~-~~~~~~~~-~~-------------  238 (364)
                      .+.++||+|+ +++|.+.++.+...|+ .|+.++ ++.++.+.+ ++    .+.. ..+..+-. .+             
T Consensus        45 ~~k~~lVTGas~GIG~aia~~La~~G~-~Vv~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~  123 (328)
T 2qhx_A           45 TVPVALVTGAAKRLGRSIAEGLHAEGY-AVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPV  123 (328)
T ss_dssp             CCCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCC-------CCB
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhhcCCeEEEEEeeCCCchhcccccccccccc
Confidence            4678999998 9999999999999999 566676 666654432 22    2322 12222211 22             


Q ss_pred             ----cHHHHHHHHHHHcCCCccEEEECCCC
Q 017916          239 ----DIAEEVEKIQKAMGTGIDVSFDCAGF  264 (364)
Q Consensus       239 ----~~~~~i~~~~~~~~~~~d~vid~~g~  264 (364)
                          ++.+.++.+.+.. +++|++|+++|.
T Consensus       124 ~~~~~v~~~~~~~~~~~-g~iD~lVnnAG~  152 (328)
T 2qhx_A          124 TLFTRCAELVAACYTHW-GRCDVLVNNASS  152 (328)
T ss_dssp             CHHHHHHHHHHHHHHHH-SCCCEEEECCCC
T ss_pred             ccHHHHHHHHHHHHHhc-CCCCEEEECCCC
Confidence                4444444443332 479999999873

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=95.46  E-value=0.059  Score=46.14  Aligned_cols=84  Identities=20%  Similarity=0.228  Sum_probs=48.7

Q ss_pred             CCCCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEe-cChhH-HH---HHHHcCCC-eEEecCC-CcccHHHHHHHHHHH
Q 017916          179 IGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVD-VDDYR-LS---VAKELGAD-NIVKVST-NLQDIAEEVEKIQKA  250 (364)
Q Consensus       179 ~~~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~-~~~~~-~~---~~~~lg~~-~~~~~~~-~~~~~~~~i~~~~~~  250 (364)
                      ..++.+|||+|+ +++|.+.+..+...|++ |+.++ .+.++ .+   .++..+.. ..+..+- ..+++.+.++.+.+.
T Consensus        10 ~~~~k~vlITGas~giG~~ia~~l~~~G~~-v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   88 (256)
T 3ezl_A           10 VMSQRIAYVTGGMGGIGTSICQRLHKDGFR-VVAGCGPNSPRRVKWLEDQKALGFDFYASEGNVGDWDSTKQAFDKVKAE   88 (256)
T ss_dssp             ---CEEEEETTTTSHHHHHHHHHHHHTTEE-EEEEECTTCSSHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCE-EEEEeCCCHHHHHHHHHHHHhcCCeeEEEecCCCCHHHHHHHHHHHHHh
Confidence            356789999998 99999999999889995 44444 33322 22   23334433 2222222 223344444444333


Q ss_pred             cCCCccEEEECCCC
Q 017916          251 MGTGIDVSFDCAGF  264 (364)
Q Consensus       251 ~~~~~d~vid~~g~  264 (364)
                       -+++|++|+++|.
T Consensus        89 -~g~id~lv~~Ag~  101 (256)
T 3ezl_A           89 -VGEIDVLVNNAGI  101 (256)
T ss_dssp             -TCCEEEEEECCCC
T ss_pred             -cCCCCEEEECCCC
Confidence             3479999999873

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*

Probab=95.45  E-value=0.11  Score=44.68  Aligned_cols=82  Identities=15%  Similarity=0.304  Sum_probs=49.4

Q ss_pred             CCCEEEEEcC---CHHHHHHHHHHHHCCCCEEEEEecChh---HHHHH-HHcCCCeEEecCCC-cccHHHHHHHHHHHcC
Q 017916          181 PETNVLIMGA---GPIGLVTMLGARAFGAPRIVIVDVDDY---RLSVA-KELGADNIVKVSTN-LQDIAEEVEKIQKAMG  252 (364)
Q Consensus       181 ~g~~VLI~Ga---g~~G~~ai~la~~~g~~~vv~~~~~~~---~~~~~-~~lg~~~~~~~~~~-~~~~~~~i~~~~~~~~  252 (364)
                      .+.++||+|+   |.+|.+.++.+...|+ .|+.++++++   ..+.+ ...+....+..+-. .+++.+.++...+.. 
T Consensus         7 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~-   84 (261)
T 2wyu_A            7 SGKKALVMGVTNQRSLGFAIAAKLKEAGA-EVALSYQAERLRPEAEKLAEALGGALLFRADVTQDEELDALFAGVKEAF-   84 (261)
T ss_dssp             TTCEEEEESCCSSSSHHHHHHHHHHHHTC-EEEEEESCGGGHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred             CCCEEEEECCCCCCcHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcCCcEEEECCCCCHHHHHHHHHHHHHHc-
Confidence            4678999985   5899999988888899 5667766654   22222 22343233333322 233333344333322 


Q ss_pred             CCccEEEECCCC
Q 017916          253 TGIDVSFDCAGF  264 (364)
Q Consensus       253 ~~~d~vid~~g~  264 (364)
                      +++|++|+++|.
T Consensus        85 g~iD~lv~~Ag~   96 (261)
T 2wyu_A           85 GGLDYLVHAIAF   96 (261)
T ss_dssp             SSEEEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            479999999873

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*

Probab=95.44  E-value=0.12  Score=46.08  Aligned_cols=80  Identities=24%  Similarity=0.296  Sum_probs=50.8

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEec---------ChhHHH-H---HHHcCCCeEEecCCCcccHHHHHHH
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDV---------DDYRLS-V---AKELGADNIVKVSTNLQDIAEEVEK  246 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~---------~~~~~~-~---~~~lg~~~~~~~~~~~~~~~~~i~~  246 (364)
                      .|.++||+|+ |++|.+.++.+...|+ .|++++.         +.++.+ .   ++..+.....|+.+ ..++.+.++.
T Consensus         8 ~gk~~lVTGas~GIG~~~a~~La~~Ga-~Vv~~~~~~~~~~~~R~~~~~~~~~~~l~~~~~~~~~D~~~-~~~~~~~~~~   85 (319)
T 1gz6_A            8 DGRVVLVTGAGGGLGRAYALAFAERGA-LVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYDS-VEAGEKLVKT   85 (319)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEEEEECCC-GGGHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEcCCcccccccCCHHHHHHHHHHHHhhCCeEEEeCCC-HHHHHHHHHH
Confidence            4678999998 9999999999989999 5565432         333332 2   23334433445433 2444444554


Q ss_pred             HHHHcCCCccEEEECCC
Q 017916          247 IQKAMGTGIDVSFDCAG  263 (364)
Q Consensus       247 ~~~~~~~~~d~vid~~g  263 (364)
                      +... -+++|++|+++|
T Consensus        86 ~~~~-~g~iD~lVnnAG  101 (319)
T 1gz6_A           86 ALDT-FGRIDVVVNNAG  101 (319)
T ss_dssp             HHHH-TSCCCEEEECCC
T ss_pred             HHHH-cCCCCEEEECCC
Confidence            4433 347999999987

>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}

Probab=95.43  E-value=0.072  Score=44.96  Aligned_cols=103  Identities=19%  Similarity=0.234  Sum_probs=67.5

Q ss_pred             CCCCCEEEEEcCCHHHHHHHHHHHHCC-CCEEEEEecChhHHHHHHH----cCCCeEEecCCCcccHHHHHHHHHHHcC-
Q 017916          179 IGPETNVLIMGAGPIGLVTMLGARAFG-APRIVIVDVDDYRLSVAKE----LGADNIVKVSTNLQDIAEEVEKIQKAMG-  252 (364)
Q Consensus       179 ~~~g~~VLI~Gag~~G~~ai~la~~~g-~~~vv~~~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~i~~~~~~~~-  252 (364)
                      ..++.+||-.|+| .|..++.+++.++ ...+++++.+++..+.+++    .|...-+.+.  ..+..+.+..+.. .+ 
T Consensus        70 ~~~~~~vLdiG~G-~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~--~~d~~~~l~~l~~-~~~  145 (232)
T 3cbg_A           70 LTGAKQVLEIGVF-RGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKAGVAEKISLR--LGPALATLEQLTQ-GKP  145 (232)
T ss_dssp             HHTCCEEEEECCT-TSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEE--ESCHHHHHHHHHT-SSS
T ss_pred             hcCCCEEEEecCC-CCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEE--EcCHHHHHHHHHh-cCC
Confidence            3467899999986 5888899998874 2379999999988777654    3543211111  1333333333321 11 


Q ss_pred             -CCccEEEECCCC---HHHHHHHHHhcccCCEEEEEc
Q 017916          253 -TGIDVSFDCAGF---NKTMSTALSATRAGGKVCLVG  285 (364)
Q Consensus       253 -~~~d~vid~~g~---~~~~~~~~~~l~~~G~~v~~g  285 (364)
                       ..+|+||-....   ...+..+++.|+++|.++.-.
T Consensus       146 ~~~fD~V~~d~~~~~~~~~l~~~~~~LkpgG~lv~~~  182 (232)
T 3cbg_A          146 LPEFDLIFIDADKRNYPRYYEIGLNLLRRGGLMVIDN  182 (232)
T ss_dssp             CCCEEEEEECSCGGGHHHHHHHHHHTEEEEEEEEEEC
T ss_pred             CCCcCEEEECCCHHHHHHHHHHHHHHcCCCeEEEEeC
Confidence             579999843321   356788999999999998764

>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}

Probab=95.42  E-value=0.066  Score=47.41  Aligned_cols=88  Identities=19%  Similarity=0.193  Sum_probs=63.8

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcCCCccEEEE
Q 017916          181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  260 (364)
Q Consensus       181 ~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid  260 (364)
                      .|.+|.|.|.|.+|...++.++.+|+ .|++.+++.++ +...++|+...        ++.+    +.    ...|+|+.
T Consensus       141 ~g~~vgIiG~G~IG~~~A~~l~~~G~-~V~~~d~~~~~-~~~~~~g~~~~--------~l~e----ll----~~aDvV~l  202 (307)
T 1wwk_A          141 EGKTIGIIGFGRIGYQVAKIANALGM-NILLYDPYPNE-ERAKEVNGKFV--------DLET----LL----KESDVVTI  202 (307)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSCCH-HHHHHTTCEEC--------CHHH----HH----HHCSEEEE
T ss_pred             CCceEEEEccCHHHHHHHHHHHHCCC-EEEEECCCCCh-hhHhhcCcccc--------CHHH----HH----hhCCEEEE
Confidence            57899999999999999999999999 68888877766 55667776321        2222    22    24799998


Q ss_pred             CCCCHH----HH-HHHHHhcccCCEEEEEcC
Q 017916          261 CAGFNK----TM-STALSATRAGGKVCLVGM  286 (364)
Q Consensus       261 ~~g~~~----~~-~~~~~~l~~~G~~v~~g~  286 (364)
                      ++...+    .+ ...+..|++++.++.++.
T Consensus       203 ~~p~~~~t~~li~~~~l~~mk~ga~lin~ar  233 (307)
T 1wwk_A          203 HVPLVESTYHLINEERLKLMKKTAILINTSR  233 (307)
T ss_dssp             CCCCSTTTTTCBCHHHHHHSCTTCEEEECSC
T ss_pred             ecCCChHHhhhcCHHHHhcCCCCeEEEECCC
Confidence            876321    12 356788999999988865

>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}

Probab=95.41  E-value=0.2  Score=44.17  Aligned_cols=88  Identities=15%  Similarity=0.118  Sum_probs=59.9

Q ss_pred             CEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcCCCccEEEECC
Q 017916          183 TNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCA  262 (364)
Q Consensus       183 ~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid~~  262 (364)
                      .+|.|.|.|.+|...+..+...|. .|.+.++++++.+.+.+.|......  +. .+.           -...|+||-|+
T Consensus         8 ~~I~iIG~G~mG~~~a~~l~~~G~-~V~~~dr~~~~~~~~~~~g~~~~~~--~~-~e~-----------~~~aDvvi~~v   72 (303)
T 3g0o_A            8 FHVGIVGLGSMGMGAARSCLRAGL-STWGADLNPQACANLLAEGACGAAA--SA-REF-----------AGVVDALVILV   72 (303)
T ss_dssp             CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCSEEES--SS-TTT-----------TTTCSEEEECC
T ss_pred             CeEEEECCCHHHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHcCCccccC--CH-HHH-----------HhcCCEEEEEC
Confidence            579999999999999988888898 6888899999988888877654111  11 110           13568888887


Q ss_pred             CCHHHHHHHH-------HhcccCCEEEEEc
Q 017916          263 GFNKTMSTAL-------SATRAGGKVCLVG  285 (364)
Q Consensus       263 g~~~~~~~~~-------~~l~~~G~~v~~g  285 (364)
                      ..+......+       ..++++..++..+
T Consensus        73 p~~~~~~~v~~~~~~l~~~l~~g~ivv~~s  102 (303)
T 3g0o_A           73 VNAAQVRQVLFGEDGVAHLMKPGSAVMVSS  102 (303)
T ss_dssp             SSHHHHHHHHC--CCCGGGSCTTCEEEECS
T ss_pred             CCHHHHHHHHhChhhHHhhCCCCCEEEecC
Confidence            7654445443       3445555555543

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...

Probab=95.38  E-value=0.078  Score=45.81  Aligned_cols=82  Identities=21%  Similarity=0.367  Sum_probs=50.6

Q ss_pred             CCCEEEEEcC---CHHHHHHHHHHHHCCCCEEEEEecChhH--HHHHHHcCCC-eEEecCC-CcccHHHHHHHHHHHcC-
Q 017916          181 PETNVLIMGA---GPIGLVTMLGARAFGAPRIVIVDVDDYR--LSVAKELGAD-NIVKVST-NLQDIAEEVEKIQKAMG-  252 (364)
Q Consensus       181 ~g~~VLI~Ga---g~~G~~ai~la~~~g~~~vv~~~~~~~~--~~~~~~lg~~-~~~~~~~-~~~~~~~~i~~~~~~~~-  252 (364)
                      .+.++||+|+   +++|.+.++.+...|+ .|+.++++.++  .+..++++.. ..+..|- ..+++.+.++++.+..+ 
T Consensus         6 ~~k~vlVTGa~~s~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   84 (269)
T 2h7i_A            6 DGKRILVSGIITDSSIAFHIARVAQEQGA-QLVLTGFDRLRLIQRITDRLPAKAPLLELDVQNEEHLASLAGRVTEAIGA   84 (269)
T ss_dssp             TTCEEEECCCSSTTSHHHHHHHHHHHTTC-EEEEEECSCHHHHHHHHTTSSSCCCEEECCTTCHHHHHHHHHHHHHHHCT
T ss_pred             CCCEEEEECCCCCCchHHHHHHHHHHCCC-EEEEEecChHHHHHHHHHhcCCCceEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            4678999984   7899999999989999 56667666554  2333445422 1222222 22334444444433333 


Q ss_pred             -CCccEEEECCC
Q 017916          253 -TGIDVSFDCAG  263 (364)
Q Consensus       253 -~~~d~vid~~g  263 (364)
                       .++|++|+++|
T Consensus        85 ~~~iD~lv~nAg   96 (269)
T 2h7i_A           85 GNKLDGVVHSIG   96 (269)
T ss_dssp             TCCEEEEEECCC
T ss_pred             CCCceEEEECCc
Confidence             27999999887

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}

Probab=95.38  E-value=0.037  Score=46.15  Aligned_cols=93  Identities=15%  Similarity=0.179  Sum_probs=57.1

Q ss_pred             EEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcCCCccEEEECC
Q 017916          184 NVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCA  262 (364)
Q Consensus       184 ~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid~~  262 (364)
                      +|||+|+ |.+|...++.+...|. .|++++++.++.+..  .++ .++..+-  .+..+.+++.    -.++|+||.++
T Consensus         2 ~ilItGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~--~~~-~~~~~D~--~d~~~~~~~~----~~~~d~vi~~a   71 (219)
T 3dqp_A            2 KIFIVGSTGRVGKSLLKSLSTTDY-QIYAGARKVEQVPQY--NNV-KAVHFDV--DWTPEEMAKQ----LHGMDAIINVS   71 (219)
T ss_dssp             EEEEESTTSHHHHHHHHHHTTSSC-EEEEEESSGGGSCCC--TTE-EEEECCT--TSCHHHHHTT----TTTCSEEEECC
T ss_pred             eEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCccchhhc--CCc-eEEEecc--cCCHHHHHHH----HcCCCEEEECC
Confidence            6999998 9999999999998998 677777777654321  122 2222221  1212233332    24799999999


Q ss_pred             CCH---------HHHHHHHHhcccC--CEEEEEcC
Q 017916          263 GFN---------KTMSTALSATRAG--GKVCLVGM  286 (364)
Q Consensus       263 g~~---------~~~~~~~~~l~~~--G~~v~~g~  286 (364)
                      |..         .....+++.++..  ++++.++.
T Consensus        72 g~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS  106 (219)
T 3dqp_A           72 GSGGKSLLKVDLYGAVKLMQAAEKAEVKRFILLST  106 (219)
T ss_dssp             CCTTSSCCCCCCHHHHHHHHHHHHTTCCEEEEECC
T ss_pred             cCCCCCcEeEeHHHHHHHHHHHHHhCCCEEEEECc
Confidence            843         1233445544433  58888764

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}

Probab=95.37  E-value=0.082  Score=44.73  Aligned_cols=80  Identities=19%  Similarity=0.209  Sum_probs=48.4

Q ss_pred             CCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEE-ecChhHHHHH-H---HcCCCe-E-EecCCC-cccHHHHHHHHHHHcC
Q 017916          182 ETNVLIMGA-GPIGLVTMLGARAFGAPRIVIV-DVDDYRLSVA-K---ELGADN-I-VKVSTN-LQDIAEEVEKIQKAMG  252 (364)
Q Consensus       182 g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~-~~~~~~~~~~-~---~lg~~~-~-~~~~~~-~~~~~~~i~~~~~~~~  252 (364)
                      +.++||+|+ |.+|...++.+...|++ |+++ .++.++.+.+ +   ..+... . +..+-. .+++.+.++++.... 
T Consensus         1 ~k~vlITGasggiG~~~a~~l~~~G~~-v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-   78 (245)
T 2ph3_A            1 MRKALITGASRGIGRAIALRLAEDGFA-LAIHYGQNREKAEEVAEEARRRGSPLVAVLGANLLEAEAATALVHQAAEVL-   78 (245)
T ss_dssp             CCEEEETTTTSHHHHHHHHHHHTTTCE-EEEEESSCHHHHHHHHHHHHHTTCSCEEEEECCTTSHHHHHHHHHHHHHHH-
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCE-EEEEcCCCHHHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHHHhc-
Confidence            357999998 99999999999889994 5555 6666554432 2   224321 2 222222 233333333333222 


Q ss_pred             CCccEEEECCC
Q 017916          253 TGIDVSFDCAG  263 (364)
Q Consensus       253 ~~~d~vid~~g  263 (364)
                      +++|++|+++|
T Consensus        79 ~~~d~li~~Ag   89 (245)
T 2ph3_A           79 GGLDTLVNNAG   89 (245)
T ss_dssp             TCCCEEEECCC
T ss_pred             CCCCEEEECCC
Confidence            47999999987

>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A

Probab=95.36  E-value=0.13  Score=47.81  Aligned_cols=103  Identities=17%  Similarity=0.184  Sum_probs=68.5

Q ss_pred             HHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHH----cCCC-eEEecCCCcccHHHHHHHHHH
Q 017916          175 RRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKE----LGAD-NIVKVSTNLQDIAEEVEKIQK  249 (364)
Q Consensus       175 ~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~----lg~~-~~~~~~~~~~~~~~~i~~~~~  249 (364)
                      ....+++|++||-.|+|. |..+.++++..+...+++++.++.+.+.+++    +|.. .++..+  ..++...   +  
T Consensus       240 ~~l~~~~g~~VLDlgaG~-G~~t~~la~~~~~~~v~a~D~~~~~l~~~~~~~~~~g~~~~~~~~D--~~~~~~~---~--  311 (429)
T 1sqg_A          240 TWLAPQNGEHILDLCAAP-GGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGD--GRYPSQW---C--  311 (429)
T ss_dssp             HHHCCCTTCEEEEESCTT-CHHHHHHHHHCTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEEECC--TTCTHHH---H--
T ss_pred             HHcCCCCcCeEEEECCCc-hHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHHcCCCeEEEeCc--hhhchhh---c--
Confidence            445678999999998765 6677788887753589999999988776654    4543 222211  1222111   1  


Q ss_pred             HcCCCccEEEE---CCCCH-------------------------HHHHHHHHhcccCCEEEEEcC
Q 017916          250 AMGTGIDVSFD---CAGFN-------------------------KTMSTALSATRAGGKVCLVGM  286 (364)
Q Consensus       250 ~~~~~~d~vid---~~g~~-------------------------~~~~~~~~~l~~~G~~v~~g~  286 (364)
                       .+..+|.|+-   |+|.+                         ..+..+++.|++||+++....
T Consensus       312 -~~~~fD~Vl~D~Pcsg~g~~~~~p~~~~~~~~~~~~~l~~~q~~~L~~a~~~LkpGG~lvystc  375 (429)
T 1sqg_A          312 -GEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATC  375 (429)
T ss_dssp             -TTCCEEEEEEECCCCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEEEEEEEEES
T ss_pred             -ccCCCCEEEEeCCCCcccccCCCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEEC
Confidence             1357999984   55532                         457788889999999997653

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*

Probab=95.36  E-value=0.05  Score=46.56  Aligned_cols=90  Identities=22%  Similarity=0.311  Sum_probs=55.5

Q ss_pred             CEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHH--HHHHHHHHHcCCCccEEE
Q 017916          183 TNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIA--EEVEKIQKAMGTGIDVSF  259 (364)
Q Consensus       183 ~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~--~~i~~~~~~~~~~~d~vi  259 (364)
                      .++||+|+ |.+|.+.++.+...|+ .|++++++.++.+.      .    +   ..|+.  +.++++.+...+++|++|
T Consensus         2 k~vlVTGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~------~----~---~~Dl~~~~~v~~~~~~~~~~id~lv   67 (257)
T 1fjh_A            2 SIIVISGCATGIGAATRKVLEAAGH-QIVGIDIRDAEVIA------D----L---STAEGRKQAIADVLAKCSKGMDGLV   67 (257)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSSSSEEC------C----T---TSHHHHHHHHHHHHTTCTTCCSEEE
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCchhhcc------c----c---ccCCCCHHHHHHHHHHhCCCCCEEE
Confidence            36899998 9999999999988999 56667665543210      0    1   11222  234444332225789999


Q ss_pred             ECCCCHH------------------HHHHHHHhccc--CCEEEEEcC
Q 017916          260 DCAGFNK------------------TMSTALSATRA--GGKVCLVGM  286 (364)
Q Consensus       260 d~~g~~~------------------~~~~~~~~l~~--~G~~v~~g~  286 (364)
                      +++|...                  ..+.++..|..  .|+++.++.
T Consensus        68 ~~Ag~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS  114 (257)
T 1fjh_A           68 LCAGLGPQTKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISS  114 (257)
T ss_dssp             ECCCCCTTCSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECC
T ss_pred             ECCCCCCCcccHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEECC
Confidence            9987422                  23345555543  389998863

>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A

Probab=95.33  E-value=0.13  Score=46.19  Aligned_cols=100  Identities=23%  Similarity=0.290  Sum_probs=65.7

Q ss_pred             CCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHc------CC--CeEEecCCCcccHHHHHHHHHH
Q 017916          178 NIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKEL------GA--DNIVKVSTNLQDIAEEVEKIQK  249 (364)
Q Consensus       178 ~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~l------g~--~~~~~~~~~~~~~~~~i~~~~~  249 (364)
                      ...++.+||+.|+|. |..+..+++..+...|++++.+++..+.+++.      +.  ..+..+   ..|..+.+...  
T Consensus       117 ~~~~~~~VLdIG~G~-G~~a~~la~~~~~~~V~~VDis~~~l~~Ar~~~~~~~~gl~~~rv~~~---~~D~~~~l~~~--  190 (334)
T 1xj5_A          117 SIPNPKKVLVIGGGD-GGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLV---IGDGVAFLKNA--  190 (334)
T ss_dssp             TSSCCCEEEEETCSS-SHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEE---ESCHHHHHHTS--
T ss_pred             hCCCCCEEEEECCCc-cHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEE---ECCHHHHHHhc--
Confidence            345678999998754 66777888876656899999999888877652      11  111111   12333322211  


Q ss_pred             HcCCCccEEEECCC----------CHHHHHHHHHhcccCCEEEEE
Q 017916          250 AMGTGIDVSFDCAG----------FNKTMSTALSATRAGGKVCLV  284 (364)
Q Consensus       250 ~~~~~~d~vid~~g----------~~~~~~~~~~~l~~~G~~v~~  284 (364)
                       ..+.+|+||....          ..+.+..+.++|+++|.++.-
T Consensus       191 -~~~~fDlIi~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~  234 (334)
T 1xj5_A          191 -AEGSYDAVIVDSSDPIGPAKELFEKPFFQSVARALRPGGVVCTQ  234 (334)
T ss_dssp             -CTTCEEEEEECCCCTTSGGGGGGSHHHHHHHHHHEEEEEEEEEE
T ss_pred             -cCCCccEEEECCCCccCcchhhhHHHHHHHHHHhcCCCcEEEEe
Confidence             1357999985322          256788999999999999885

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*

Probab=95.33  E-value=0.053  Score=46.32  Aligned_cols=76  Identities=22%  Similarity=0.312  Sum_probs=48.1

Q ss_pred             EEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHH-HHcCCC-eEEecCCCcccHHHHHHHHHHHc---CCCccE
Q 017916          184 NVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KELGAD-NIVKVSTNLQDIAEEVEKIQKAM---GTGIDV  257 (364)
Q Consensus       184 ~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~-~~lg~~-~~~~~~~~~~~~~~~i~~~~~~~---~~~~d~  257 (364)
                      ++||+|+ |++|.+.++.+...|+ .|+.++++.++.+.+ ++++.. ..+..|-.+   .+.++++....   -+++|+
T Consensus         2 ~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~---~~~v~~~~~~~~~~~g~iD~   77 (248)
T 3asu_A            2 IVLVTGATAGFGECITRRFIQQGH-KVIATGRRQERLQELKDELGDNLYIAQLDVRN---RAAIEEMLASLPAEWCNIDI   77 (248)
T ss_dssp             EEEETTTTSTTHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCTTEEEEECCTTC---HHHHHHHHHTSCTTTCCCCE
T ss_pred             EEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhcCceEEEEcCCCC---HHHHHHHHHHHHHhCCCCCE
Confidence            6899998 9999999999988999 577777777665443 445432 122222221   12233333211   247999


Q ss_pred             EEECCC
Q 017916          258 SFDCAG  263 (364)
Q Consensus       258 vid~~g  263 (364)
                      +|+++|
T Consensus        78 lvnnAg   83 (248)
T 3asu_A           78 LVNNAG   83 (248)
T ss_dssp             EEECCC
T ss_pred             EEECCC
Confidence            999887

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}

Probab=95.33  E-value=0.11  Score=45.10  Aligned_cols=78  Identities=19%  Similarity=0.262  Sum_probs=50.4

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHH-HHHcCCCe-EEecCCCc-ccHHHHHHHHHHHcCCCcc
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSV-AKELGADN-IVKVSTNL-QDIAEEVEKIQKAMGTGID  256 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~-~~~lg~~~-~~~~~~~~-~~~~~~i~~~~~~~~~~~d  256 (364)
                      .|.++||+|+ +++|.+.++.+...|+ .|+.++++.++.+. .++++... .+..|-.+ +++.+.++.+ . .-+++|
T Consensus        29 ~~k~vlVTGas~GIG~aia~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~-~-~~~~id  105 (281)
T 3ppi_A           29 EGASAIVSGGAGGLGEATVRRLHADGL-GVVIADLAAEKGKALADELGNRAEFVSTNVTSEDSVLAAIEAA-N-QLGRLR  105 (281)
T ss_dssp             TTEEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHH-T-TSSEEE
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHH-H-HhCCCC
Confidence            4678999998 9999999999989999 57777787776554 34565432 22222222 2333333333 2 234789


Q ss_pred             EEEEC
Q 017916          257 VSFDC  261 (364)
Q Consensus       257 ~vid~  261 (364)
                      ++|.+
T Consensus       106 ~lv~~  110 (281)
T 3ppi_A          106 YAVVA  110 (281)
T ss_dssp             EEEEC
T ss_pred             eEEEc
Confidence            99987

>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*

Probab=95.31  E-value=0.088  Score=45.55  Aligned_cols=105  Identities=16%  Similarity=0.183  Sum_probs=67.2

Q ss_pred             CCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcCCCccEEEEC
Q 017916          182 ETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDC  261 (364)
Q Consensus       182 g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid~  261 (364)
                      +.+++|.|+|+.|.+++..+...| ..+.++.++.+|.+.+.++++. ...+++    +            ..+|+||+|
T Consensus       118 ~k~vlvlGaGGaaraia~~L~~~G-~~v~V~nRt~~ka~~la~~~~~-~~~~~~----l------------~~~DiVIna  179 (269)
T 3phh_A          118 YQNALILGAGGSAKALACELKKQG-LQVSVLNRSSRGLDFFQRLGCD-CFMEPP----K------------SAFDLIINA  179 (269)
T ss_dssp             CCEEEEECCSHHHHHHHHHHHHTT-CEEEEECSSCTTHHHHHHHTCE-EESSCC----S------------SCCSEEEEC
T ss_pred             CCEEEEECCCHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHCCCe-EecHHH----h------------ccCCEEEEc
Confidence            889999999999999999999999 5788888888776544477743 222221    0            168999998


Q ss_pred             CCCHH----HH--HHHHHhcccCCEEEEEcCCCCCccccchhhhhcCcEEE
Q 017916          262 AGFNK----TM--STALSATRAGGKVCLVGMGHHEMTVPLTPAAVREVDVV  306 (364)
Q Consensus       262 ~g~~~----~~--~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~  306 (364)
                      +..+.    .+  ..+...++++..++++....  ....+...-.+++...
T Consensus       180 Tp~Gm~~~~~l~~~~l~~~l~~~~~v~D~vY~P--~T~ll~~A~~~G~~~~  228 (269)
T 3phh_A          180 TSASLHNELPLNKEVLKGYFKEGKLAYDLAYGF--LTPFLSLAKELKTPFQ  228 (269)
T ss_dssp             CTTCCCCSCSSCHHHHHHHHHHCSEEEESCCSS--CCHHHHHHHHTTCCEE
T ss_pred             ccCCCCCCCCCChHHHHhhCCCCCEEEEeCCCC--chHHHHHHHHCcCEEE
Confidence            76321    11  12223677788777765433  2333344445555443

>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0

Probab=95.31  E-value=0.065  Score=44.79  Aligned_cols=103  Identities=18%  Similarity=0.202  Sum_probs=67.1

Q ss_pred             CCCCCEEEEEcCCHHHHHHHHHHHHCC-CCEEEEEecChhHHHHHHH----cCCCe-EEecCCCcccHHHHHHHHHHHc-
Q 017916          179 IGPETNVLIMGAGPIGLVTMLGARAFG-APRIVIVDVDDYRLSVAKE----LGADN-IVKVSTNLQDIAEEVEKIQKAM-  251 (364)
Q Consensus       179 ~~~g~~VLI~Gag~~G~~ai~la~~~g-~~~vv~~~~~~~~~~~~~~----lg~~~-~~~~~~~~~~~~~~i~~~~~~~-  251 (364)
                      ..++.+||-.|+|. |..++.+++.++ ...+++++.+++..+.+++    .+... +....   .+..+.+....... 
T Consensus        62 ~~~~~~vLdiG~G~-G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~---~d~~~~~~~~~~~~~  137 (225)
T 3tr6_A           62 LMQAKKVIDIGTFT-GYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKAGLSDKIGLRL---SPAKDTLAELIHAGQ  137 (225)
T ss_dssp             HHTCSEEEEECCTT-SHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEE---SCHHHHHHHHHTTTC
T ss_pred             hhCCCEEEEeCCcc-hHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEe---CCHHHHHHHhhhccC
Confidence            35678999998765 778888998864 4589999999988777654    35432 21111   23333333332100 


Q ss_pred             CCCccEEEECCCC---HHHHHHHHHhcccCCEEEEEc
Q 017916          252 GTGIDVSFDCAGF---NKTMSTALSATRAGGKVCLVG  285 (364)
Q Consensus       252 ~~~~d~vid~~g~---~~~~~~~~~~l~~~G~~v~~g  285 (364)
                      ...+|+|+-....   ...+..+.+.|+|+|.++...
T Consensus       138 ~~~fD~v~~~~~~~~~~~~l~~~~~~L~pgG~lv~~~  174 (225)
T 3tr6_A          138 AWQYDLIYIDADKANTDLYYEESLKLLREGGLIAVDN  174 (225)
T ss_dssp             TTCEEEEEECSCGGGHHHHHHHHHHHEEEEEEEEEEC
T ss_pred             CCCccEEEECCCHHHHHHHHHHHHHhcCCCcEEEEeC
Confidence            1579999843331   356788899999999998764

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}

Probab=95.30  E-value=0.069  Score=46.77  Aligned_cols=82  Identities=22%  Similarity=0.309  Sum_probs=49.3

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCC--EEEEEecChhHHHHH-HHc-----CCC-eEEecCC-CcccHHHHHHHHHH
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAP--RIVIVDVDDYRLSVA-KEL-----GAD-NIVKVST-NLQDIAEEVEKIQK  249 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~--~vv~~~~~~~~~~~~-~~l-----g~~-~~~~~~~-~~~~~~~~i~~~~~  249 (364)
                      .+.++||+|+ +++|.+.+..+...|+.  .|+.++++.++.+.+ +++     +.. ..+..|- ..+++.+.++.+.+
T Consensus        32 ~~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~  111 (287)
T 3rku_A           32 AKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDITQAEKIKPFIENLPQ  111 (287)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCTTCEEEEEECCTTCGGGHHHHHHTSCG
T ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHH
Confidence            4679999998 99999888777666652  577777777665443 222     322 1222222 22344433333322


Q ss_pred             HcCCCccEEEECCC
Q 017916          250 AMGTGIDVSFDCAG  263 (364)
Q Consensus       250 ~~~~~~d~vid~~g  263 (364)
                      . -+++|++|+++|
T Consensus       112 ~-~g~iD~lVnnAG  124 (287)
T 3rku_A          112 E-FKDIDILVNNAG  124 (287)
T ss_dssp             G-GCSCCEEEECCC
T ss_pred             h-cCCCCEEEECCC
Confidence            2 247999999987

>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}

Probab=95.30  E-value=0.13  Score=45.86  Aligned_cols=129  Identities=18%  Similarity=0.211  Sum_probs=79.7

Q ss_pred             EEEEEcCCHHHHHHHHHHHHC-CCCEEEEEecChhHHH-HHHHcCCCeEEecCCCcccHHHHHHHHHHHcCCCccEEEEC
Q 017916          184 NVLIMGAGPIGLVTMLGARAF-GAPRIVIVDVDDYRLS-VAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDC  261 (364)
Q Consensus       184 ~VLI~Gag~~G~~ai~la~~~-g~~~vv~~~~~~~~~~-~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid~  261 (364)
                      +|.|.|.|.+|...+..++.. +++.+.+.+.+.++.+ +.+++|+.    +.    ++.    ++..  ...+|+|+.|
T Consensus         5 ~vgiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~~~~~----~~----~~~----~~l~--~~~~D~V~i~   70 (331)
T 4hkt_A            5 RFGLLGAGRIGKVHAKAVSGNADARLVAVADAFPAAAEAIAGAYGCE----VR----TID----AIEA--AADIDAVVIC   70 (331)
T ss_dssp             EEEEECCSHHHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHHTTCE----EC----CHH----HHHH--CTTCCEEEEC
T ss_pred             EEEEECCCHHHHHHHHHHhhCCCcEEEEEECCCHHHHHHHHHHhCCC----cC----CHH----HHhc--CCCCCEEEEe
Confidence            688999999998877766664 6755556777777754 44567764    21    222    2222  3479999999


Q ss_pred             CCCHHHHHHHHHhcccCCEEEEEcCCCCCccccch---h-hhhcCcEEEee--ccCCCcHHHHHHHHHcCCC
Q 017916          262 AGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLT---P-AAVREVDVVGV--FRYKNTWPLCLELLRSGKI  327 (364)
Q Consensus       262 ~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~---~-~~~~~~~~~~~--~~~~~~~~~~~~~l~~g~~  327 (364)
                      +....+...+..+|..+ +-+.+.-+.........   . .-.+++.+.-.  ..+...+..+.+++++|.+
T Consensus        71 tp~~~h~~~~~~al~~g-k~v~~EKP~~~~~~~~~~l~~~a~~~g~~~~v~~~~r~~p~~~~~~~~i~~g~i  141 (331)
T 4hkt_A           71 TPTDTHADLIERFARAG-KAIFCEKPIDLDAERVRACLKVVSDTKAKLMVGFNRRFDPHFMAVRKAIDDGRI  141 (331)
T ss_dssp             SCGGGHHHHHHHHHHTT-CEEEECSCSCSSHHHHHHHHHHHHHTTCCEEECCGGGGCHHHHHHHHHHHTTTT
T ss_pred             CCchhHHHHHHHHHHcC-CcEEEecCCCCCHHHHHHHHHHHHHcCCeEEEcccccCCHHHHHHHHHHHcCCC
Confidence            99878888888888765 55556432211111111   1 12233333322  2336678889999999887

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP}

Probab=95.30  E-value=0.029  Score=47.86  Aligned_cols=75  Identities=17%  Similarity=0.054  Sum_probs=49.0

Q ss_pred             CCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEE-e--cChhHHHHH-HHc-CCCeEEecCCCcccHHHHHHHHHHHcCCCc
Q 017916          182 ETNVLIMGA-GPIGLVTMLGARAFGAPRIVIV-D--VDDYRLSVA-KEL-GADNIVKVSTNLQDIAEEVEKIQKAMGTGI  255 (364)
Q Consensus       182 g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~-~--~~~~~~~~~-~~l-g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~  255 (364)
                      +.++||+|+ |.+|.+.++.+...|+ .|+.+ +  ++.++.+.+ +++ +.+ +.    ..+++.+.++.+.+. -+++
T Consensus         1 ~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~~~~r~~~~~~~~~~~~~~~~-~~----~~~~v~~~~~~~~~~-~g~i   73 (244)
T 1zmo_A            1 MVIALVTHARHFAGPAAVEALTQDGY-TVVCHDASFADAAERQRFESENPGTI-AL----AEQKPERLVDATLQH-GEAI   73 (244)
T ss_dssp             -CEEEESSTTSTTHHHHHHHHHHTTC-EEEECCGGGGSHHHHHHHHHHSTTEE-EC----CCCCGGGHHHHHGGG-SSCE
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCC-EEEEecCCcCCHHHHHHHHHHhCCCc-cc----CHHHHHHHHHHHHHH-cCCC
Confidence            467899998 9999999999999999 57777 5  676665443 444 322 21    223444444444332 3479


Q ss_pred             cEEEECCC
Q 017916          256 DVSFDCAG  263 (364)
Q Consensus       256 d~vid~~g  263 (364)
                      |++|+++|
T Consensus        74 D~lv~~Ag   81 (244)
T 1zmo_A           74 DTIVSNDY   81 (244)
T ss_dssp             EEEEECCC
T ss_pred             CEEEECCC
Confidence            99999887

>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*

Probab=95.30  E-value=0.24  Score=43.72  Aligned_cols=100  Identities=20%  Similarity=0.120  Sum_probs=64.8

Q ss_pred             CCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcC--------CCeEEecCCCcccHHHHHHHHHHH
Q 017916          179 IGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELG--------ADNIVKVSTNLQDIAEEVEKIQKA  250 (364)
Q Consensus       179 ~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg--------~~~~~~~~~~~~~~~~~i~~~~~~  250 (364)
                      ..++.+||+.|+|. |..+..+++..+...+++++.+++-.+.+++.-        ...+...   ..|..+.+..   .
T Consensus        93 ~~~~~~VLdiG~G~-G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~---~~D~~~~~~~---~  165 (304)
T 3bwc_A           93 HPKPERVLIIGGGD-GGVLREVLRHGTVEHCDLVDIDGEVMEQSKQHFPQISRSLADPRATVR---VGDGLAFVRQ---T  165 (304)
T ss_dssp             SSSCCEEEEEECTT-SHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEE---ESCHHHHHHS---S
T ss_pred             CCCCCeEEEEcCCC-CHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEE---ECcHHHHHHh---c
Confidence            46778999998754 667777777666668999999998888776522        1111111   1233222211   0


Q ss_pred             cCCCccEEEECCC----------CHHHHHHHHHhcccCCEEEEEc
Q 017916          251 MGTGIDVSFDCAG----------FNKTMSTALSATRAGGKVCLVG  285 (364)
Q Consensus       251 ~~~~~d~vid~~g----------~~~~~~~~~~~l~~~G~~v~~g  285 (364)
                      ..+.+|+|+....          +.+.+..+.++|+++|.++...
T Consensus       166 ~~~~fDvIi~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~  210 (304)
T 3bwc_A          166 PDNTYDVVIIDTTDPAGPASKLFGEAFYKDVLRILKPDGICCNQG  210 (304)
T ss_dssp             CTTCEEEEEEECC---------CCHHHHHHHHHHEEEEEEEEEEE
T ss_pred             cCCceeEEEECCCCccccchhhhHHHHHHHHHHhcCCCcEEEEec
Confidence            2457999885321          1367888999999999998864

>4had_A Probable oxidoreductase protein; structural genomics, protein structure initiative, nysgrc, PSI-biology; 2.00A {Rhizobium etli}

Probab=95.30  E-value=0.18  Score=45.37  Aligned_cols=132  Identities=15%  Similarity=0.144  Sum_probs=82.8

Q ss_pred             CEEEEEcCCHHHHH-HHHHHHH-CCCCEEEEEecChhHHH-HHHHcCCCeEEecCCCcccHHHHHHHHHHHcCCCccEEE
Q 017916          183 TNVLIMGAGPIGLV-TMLGARA-FGAPRIVIVDVDDYRLS-VAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF  259 (364)
Q Consensus       183 ~~VLI~Gag~~G~~-ai~la~~-~g~~~vv~~~~~~~~~~-~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vi  259 (364)
                      =+|.|.|+|.+|.. .+...+. -+++.+.+++.+.++.+ +++++|+..++.      ++.    ++..  ...+|+|+
T Consensus        24 irigiIG~G~ig~~~~~~~~~~~~~~~lvav~d~~~~~a~~~a~~~g~~~~y~------d~~----ell~--~~~iDaV~   91 (350)
T 4had_A           24 LRFGIISTAKIGRDNVVPAIQDAENCVVTAIASRDLTRAREMADRFSVPHAFG------SYE----EMLA--SDVIDAVY   91 (350)
T ss_dssp             EEEEEESCCHHHHHTHHHHHHHCSSEEEEEEECSSHHHHHHHHHHHTCSEEES------SHH----HHHH--CSSCSEEE
T ss_pred             cEEEEEcChHHHHHHHHHHHHhCCCeEEEEEECCCHHHHHHHHHHcCCCeeeC------CHH----HHhc--CCCCCEEE
Confidence            37899999999964 3444444 47765666777777654 567889875542      322    3332  45799999


Q ss_pred             ECCCCHHHHHHHHHhcccCCEEEEEcCCCCCccccchh----hhhcCcEEEee--ccCCCcHHHHHHHHHcCCC
Q 017916          260 DCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTP----AAVREVDVVGV--FRYKNTWPLCLELLRSGKI  327 (364)
Q Consensus       260 d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~----~~~~~~~~~~~--~~~~~~~~~~~~~l~~g~~  327 (364)
                      -|+....+...+..+|.. |+-|++.-+.....-....    .-.+++.+.-.  ..+...+..+-+++++|.+
T Consensus        92 I~tP~~~H~~~~~~al~a-GkhVl~EKPla~~~~ea~~l~~~a~~~~~~l~v~~~~R~~p~~~~~k~~i~~G~i  164 (350)
T 4had_A           92 IPLPTSQHIEWSIKAADA-GKHVVCEKPLALKAGDIDAVIAARDRNKVVVTEAYMITYSPVWQKVRSLIDEGAI  164 (350)
T ss_dssp             ECSCGGGHHHHHHHHHHT-TCEEEECSCCCSSGGGGHHHHHHHHHHTCCEEECCGGGGSHHHHHHHHHHHTTTT
T ss_pred             EeCCCchhHHHHHHHHhc-CCEEEEeCCcccchhhHHHHHHHHHHcCCceeEeeeeecCHHHHHhhHhhhcCCC
Confidence            999988888888888874 6677776332211111111    11233333222  2346678889999999887

>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5

Probab=95.29  E-value=0.092  Score=45.57  Aligned_cols=115  Identities=12%  Similarity=0.086  Sum_probs=70.3

Q ss_pred             HHHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHH-HHHHHcCCCeEEecCCCcccHHHHHHHHHHHcC
Q 017916          174 CRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRL-SVAKELGADNIVKVSTNLQDIAEEVEKIQKAMG  252 (364)
Q Consensus       174 l~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~-~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~  252 (364)
                      |+......+.++||.|+|+.|.+++.-+...|++.+.++.++.+|. +++++++..    +..   +.    .      .
T Consensus       111 l~~~~~~~~~~vlvlGaGgaarav~~~L~~~G~~~i~v~nRt~~ka~~la~~~~~~----~~~---~~----~------~  173 (271)
T 1npy_A          111 IEKYHLNKNAKVIVHGSGGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALYGYA----YIN---SL----E------N  173 (271)
T ss_dssp             HHHTTCCTTSCEEEECSSTTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHHTCE----EES---CC----T------T
T ss_pred             HHHhCCCCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCc----cch---hh----h------c
Confidence            3433444678999999999999999888899987788888887774 455667652    111   00    0      1


Q ss_pred             CCccEEEECCCCHHHH-------HHHHHhcccCCEEEEEcCCCCCccccchhhhhcCcEEE
Q 017916          253 TGIDVSFDCAGFNKTM-------STALSATRAGGKVCLVGMGHHEMTVPLTPAAVREVDVV  306 (364)
Q Consensus       253 ~~~d~vid~~g~~~~~-------~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~  306 (364)
                      ..+|+||+|+..+...       ......+.++..++++-..... ...+...-.++....
T Consensus       174 ~~~DivInaTp~gm~~~~~~~~~~~~~~~l~~~~~v~DlvY~P~~-T~ll~~A~~~G~~~i  233 (271)
T 1npy_A          174 QQADILVNVTSIGMKGGKEEMDLAFPKAFIDNASVAFDVVAMPVE-TPFIRYAQARGKQTI  233 (271)
T ss_dssp             CCCSEEEECSSTTCTTSTTTTSCSSCHHHHHHCSEEEECCCSSSS-CHHHHHHHHTTCEEE
T ss_pred             ccCCEEEECCCCCccCccccCCCCCCHHHcCCCCEEEEeecCCCC-CHHHHHHHHCCCEEE
Confidence            3689999998753210       1113456666666666432222 233334445555544

>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*

Probab=95.29  E-value=0.14  Score=46.15  Aligned_cols=131  Identities=15%  Similarity=0.080  Sum_probs=80.1

Q ss_pred             CEEEEEcCCHHHH-HHHHHHHHC-CCCEEEEEecChhHHH-HHHHcCCCeEEecCCCcccHHHHHHHHHHHcCCCccEEE
Q 017916          183 TNVLIMGAGPIGL-VTMLGARAF-GAPRIVIVDVDDYRLS-VAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF  259 (364)
Q Consensus       183 ~~VLI~Gag~~G~-~ai~la~~~-g~~~vv~~~~~~~~~~-~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vi  259 (364)
                      -+|.|.|.|.+|. ..+..++.. +++.+.+.+.+.++.+ +++++|+...-       +    ++++..  ...+|+|+
T Consensus        28 ~rigiIG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~g~~~~~-------~----~~~ll~--~~~~D~V~   94 (350)
T 3rc1_A           28 IRVGVIGCADIAWRRALPALEAEPLTEVTAIASRRWDRAKRFTERFGGEPVE-------G----YPALLE--RDDVDAVY   94 (350)
T ss_dssp             EEEEEESCCHHHHHTHHHHHHHCTTEEEEEEEESSHHHHHHHHHHHCSEEEE-------S----HHHHHT--CTTCSEEE
T ss_pred             eEEEEEcCcHHHHHHHHHHHHhCCCeEEEEEEcCCHHHHHHHHHHcCCCCcC-------C----HHHHhc--CCCCCEEE
Confidence            4789999999997 555555555 7755556677766654 45667875431       2    222321  35799999


Q ss_pred             ECCCCHHHHHHHHHhcccCCEEEEEcCCCCCccccch---h-hhhcCcEEEee--ccCCCcHHHHHHHHHcCCC
Q 017916          260 DCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLT---P-AAVREVDVVGV--FRYKNTWPLCLELLRSGKI  327 (364)
Q Consensus       260 d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~---~-~~~~~~~~~~~--~~~~~~~~~~~~~l~~g~~  327 (364)
                      .|+....+...+..+|..| +-+++.-+.....-...   . .-.+++.+.-.  ..+...++.+.+++++|.+
T Consensus        95 i~tp~~~h~~~~~~al~aG-k~Vl~EKP~a~~~~ea~~l~~~a~~~g~~~~v~~~~R~~p~~~~~k~~i~~G~i  167 (350)
T 3rc1_A           95 VPLPAVLHAEWIDRALRAG-KHVLAEKPLTTDRPQAERLFAVARERGLLLMENFMFLHHPQHRQVADMLDEGVI  167 (350)
T ss_dssp             ECCCGGGHHHHHHHHHHTT-CEEEEESSSCSSHHHHHHHHHHHHHTTCCEEEECGGGGCTHHHHHHHHHHTTTT
T ss_pred             ECCCcHHHHHHHHHHHHCC-CcEEEeCCCCCCHHHHHHHHHHHHHhCCEEEEEecccCCHHHHHHHHHHhcCCC
Confidence            9999877888888888755 44666532211110111   1 12233333322  3346778899999999887

>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}

Probab=95.28  E-value=0.1  Score=44.98  Aligned_cols=100  Identities=19%  Similarity=0.193  Sum_probs=65.0

Q ss_pred             HHHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCe--EEecCCCcccHHHHHHHHHHHc
Q 017916          174 CRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADN--IVKVSTNLQDIAEEVEKIQKAM  251 (364)
Q Consensus       174 l~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~--~~~~~~~~~~~~~~i~~~~~~~  251 (364)
                      +....++++++||=.|+|. |..++.+++. |+ .|++++.+++..+.+++.-...  ..++.....+..       ...
T Consensus        38 l~~l~l~~g~~VLDlGcGt-G~~a~~La~~-g~-~V~gvD~S~~ml~~Ar~~~~~~~v~~~~~~~~~~~~-------~~~  107 (261)
T 3iv6_A           38 IFLENIVPGSTVAVIGAST-RFLIEKALER-GA-SVTVFDFSQRMCDDLAEALADRCVTIDLLDITAEIP-------KEL  107 (261)
T ss_dssp             HHTTTCCTTCEEEEECTTC-HHHHHHHHHT-TC-EEEEEESCHHHHHHHHHHTSSSCCEEEECCTTSCCC-------GGG
T ss_pred             HHhcCCCCcCEEEEEeCcc-hHHHHHHHhc-CC-EEEEEECCHHHHHHHHHHHHhccceeeeeecccccc-------ccc
Confidence            4567788999999999865 7788888875 66 7999999999998887643221  112211110000       001


Q ss_pred             CCCccEEEECCC-----C---HHHHHHHHHhcccCCEEEEE
Q 017916          252 GTGIDVSFDCAG-----F---NKTMSTALSATRAGGKVCLV  284 (364)
Q Consensus       252 ~~~~d~vid~~g-----~---~~~~~~~~~~l~~~G~~v~~  284 (364)
                      .+.+|+|+.+..     .   ...+..+.++| |+|+++..
T Consensus       108 ~~~fD~Vv~~~~l~~~~~~~~~~~l~~l~~lL-PGG~l~lS  147 (261)
T 3iv6_A          108 AGHFDFVLNDRLINRFTTEEARRACLGMLSLV-GSGTVRAS  147 (261)
T ss_dssp             TTCCSEEEEESCGGGSCHHHHHHHHHHHHHHH-TTSEEEEE
T ss_pred             CCCccEEEEhhhhHhCCHHHHHHHHHHHHHhC-cCcEEEEE
Confidence            357999986432     1   23566778889 99998754

>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*

Probab=95.28  E-value=0.14  Score=44.80  Aligned_cols=36  Identities=28%  Similarity=0.398  Sum_probs=31.3

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecCh
Q 017916          181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDD  216 (364)
Q Consensus       181 ~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~  216 (364)
                      .+.+|+|.|+|++|..++..+.+.|...+..+|.+.
T Consensus        35 ~~~~VlVvGaGGlGs~va~~La~aGVG~i~lvD~D~   70 (292)
T 3h8v_A           35 RTFAVAIVGVGGVGSVTAEMLTRCGIGKLLLFDYDK   70 (292)
T ss_dssp             GGCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred             hCCeEEEECcCHHHHHHHHHHHHcCCCEEEEECCCc
Confidence            457999999999999999999999998888887544

>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*

Probab=95.27  E-value=0.066  Score=46.21  Aligned_cols=97  Identities=19%  Similarity=0.205  Sum_probs=63.6

Q ss_pred             CCCCCCEEEEEcCCHHHHHHHHHHHHC---CCCEEEEEecChhHHHHHHH----cCCCeEEecCCCcccHHHHHHHHHHH
Q 017916          178 NIGPETNVLIMGAGPIGLVTMLGARAF---GAPRIVIVDVDDYRLSVAKE----LGADNIVKVSTNLQDIAEEVEKIQKA  250 (364)
Q Consensus       178 ~~~~g~~VLI~Gag~~G~~ai~la~~~---g~~~vv~~~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~i~~~~~~  250 (364)
                      .+++|.+||-.|+|. |..+..+++..   |+ .|++++.+++..+.+++    .+...-+.+..  .+..    ++   
T Consensus        67 ~~~~~~~vLDlGcGt-G~~~~~la~~~~~~~~-~v~gvD~s~~ml~~A~~~~~~~~~~~~v~~~~--~D~~----~~---  135 (261)
T 4gek_A           67 FVQPGTQVYDLGCSL-GAATLSVRRNIHHDNC-KIIAIDNSPAMIERCRRHIDAYKAPTPVDVIE--GDIR----DI---  135 (261)
T ss_dssp             HCCTTCEEEEETCTT-THHHHHHHHTCCSSSC-EEEEEESCHHHHHHHHHHHHTSCCSSCEEEEE--SCTT----TC---
T ss_pred             hCCCCCEEEEEeCCC-CHHHHHHHHhcCCCCC-EEEEEECCHHHHHHHHHHHHhhccCceEEEee--cccc----cc---
Confidence            378999999999765 67778888875   45 79999999988877764    23321111100  1110    01   


Q ss_pred             cCCCccEEEECCC-----C---HHHHHHHHHhcccCCEEEEEc
Q 017916          251 MGTGIDVSFDCAG-----F---NKTMSTALSATRAGGKVCLVG  285 (364)
Q Consensus       251 ~~~~~d~vid~~g-----~---~~~~~~~~~~l~~~G~~v~~g  285 (364)
                      .-..+|+|+....     .   ...+..+.+.|+|||+++...
T Consensus       136 ~~~~~d~v~~~~~l~~~~~~~~~~~l~~i~~~LkpGG~lii~e  178 (261)
T 4gek_A          136 AIENASMVVLNFTLQFLEPSERQALLDKIYQGLNPGGALVLSE  178 (261)
T ss_dssp             CCCSEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             cccccccceeeeeeeecCchhHhHHHHHHHHHcCCCcEEEEEe
Confidence            1246888876432     1   136788999999999999865

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2

Probab=95.27  E-value=0.1  Score=44.67  Aligned_cols=82  Identities=16%  Similarity=0.263  Sum_probs=49.2

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhH-HHHHHH----cCCCe-EEecCCC-cccHHHHHHHHHHHcC
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYR-LSVAKE----LGADN-IVKVSTN-LQDIAEEVEKIQKAMG  252 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~-~~~~~~----lg~~~-~~~~~~~-~~~~~~~i~~~~~~~~  252 (364)
                      .+.++||+|+ |.+|.+.++.+...|+ .|++++++.++ .+.+++    .+... .+..+-. .+++.+.++.+... -
T Consensus        13 ~~k~vlITGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-~   90 (265)
T 1h5q_A           13 VNKTIIVTGGNRGIGLAFTRAVAAAGA-NVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDAD-L   90 (265)
T ss_dssp             TTEEEEEETTTSHHHHHHHHHHHHTTE-EEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHH-S
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCcchhhHHHHHHHHHhcCCeeEEEEeeCCCHHHHHHHHHHHHHh-c
Confidence            4678999998 9999999999888999 56666664332 222222    24322 2222222 23333344443332 3


Q ss_pred             CCccEEEECCCC
Q 017916          253 TGIDVSFDCAGF  264 (364)
Q Consensus       253 ~~~d~vid~~g~  264 (364)
                      +++|++|+++|.
T Consensus        91 ~~id~li~~Ag~  102 (265)
T 1h5q_A           91 GPISGLIANAGV  102 (265)
T ss_dssp             CSEEEEEECCCC
T ss_pred             CCCCEEEECCCc
Confidence            479999999873

>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3

Probab=95.25  E-value=0.12  Score=43.00  Aligned_cols=100  Identities=15%  Similarity=0.173  Sum_probs=62.1

Q ss_pred             cCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHH----HHHHcCCCeEEecCCCcccHHHHHHHHHHHcC
Q 017916          177 ANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLS----VAKELGADNIVKVSTNLQDIAEEVEKIQKAMG  252 (364)
Q Consensus       177 ~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~----~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~  252 (364)
                      ..+++|++||=.|+|. |..+..+++..+...|++++.+++..+    .++...  .+........+...    .. ...
T Consensus        53 ~~~~~g~~VLDlGcGt-G~~~~~la~~~~~~~V~gvD~s~~~l~~~~~~a~~~~--~v~~~~~d~~~~~~----~~-~~~  124 (210)
T 1nt2_A           53 LKLRGDERVLYLGAAS-GTTVSHLADIVDEGIIYAVEYSAKPFEKLLELVRERN--NIIPLLFDASKPWK----YS-GIV  124 (210)
T ss_dssp             CCCCSSCEEEEETCTT-SHHHHHHHHHTTTSEEEEECCCHHHHHHHHHHHHHCS--SEEEECSCTTCGGG----TT-TTC
T ss_pred             cCCCCCCEEEEECCcC-CHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHhcCC--CeEEEEcCCCCchh----hc-ccc
Confidence            4578999999998765 677888888876447999999986433    333332  11111111111100    00 012


Q ss_pred             CCccEEEECCCCHH----HHHHHHHhcccCCEEEEE
Q 017916          253 TGIDVSFDCAGFNK----TMSTALSATRAGGKVCLV  284 (364)
Q Consensus       253 ~~~d~vid~~g~~~----~~~~~~~~l~~~G~~v~~  284 (364)
                      +.+|+|+.....++    .+.++.+.|+|||+++..
T Consensus       125 ~~fD~V~~~~~~~~~~~~~l~~~~r~LkpgG~l~i~  160 (210)
T 1nt2_A          125 EKVDLIYQDIAQKNQIEILKANAEFFLKEKGEVVIM  160 (210)
T ss_dssp             CCEEEEEECCCSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             cceeEEEEeccChhHHHHHHHHHHHHhCCCCEEEEE
Confidence            57999987654321    267889999999999876

>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}

Probab=95.25  E-value=0.23  Score=43.45  Aligned_cols=103  Identities=20%  Similarity=0.263  Sum_probs=66.2

Q ss_pred             CCCCCCEEEEEcCCHHHHHHHHHHHHC-CCCEEEEEecChhHHHHHHHc-----C-CCe--EEecCCCcccHHHHHHHHH
Q 017916          178 NIGPETNVLIMGAGPIGLVTMLGARAF-GAPRIVIVDVDDYRLSVAKEL-----G-ADN--IVKVSTNLQDIAEEVEKIQ  248 (364)
Q Consensus       178 ~~~~g~~VLI~Gag~~G~~ai~la~~~-g~~~vv~~~~~~~~~~~~~~l-----g-~~~--~~~~~~~~~~~~~~i~~~~  248 (364)
                      ..+++.+||-.|+|. |..+..+++.+ ....+++++.++...+.+++.     + ...  ++..+.  .++.  .....
T Consensus        33 ~~~~~~~vLDiGcG~-G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~--~~~~--~~~~~  107 (299)
T 3g5t_A           33 HDGERKLLVDVGCGP-GTATLQMAQELKPFEQIIGSDLSATMIKTAEVIKEGSPDTYKNVSFKISSS--DDFK--FLGAD  107 (299)
T ss_dssp             CCSCCSEEEEETCTT-THHHHHHHHHSSCCSEEEEEESCHHHHHHHHHHHHHCC-CCTTEEEEECCT--TCCG--GGCTT
T ss_pred             hcCCCCEEEEECCCC-CHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhccCCCCceEEEEcCH--HhCC--ccccc
Confidence            346889999999875 88899999875 555899999999888777653     1 111  221111  1110  00000


Q ss_pred             HHcCCCccEEEECCC-----CHHHHHHHHHhcccCCEEEEEc
Q 017916          249 KAMGTGIDVSFDCAG-----FNKTMSTALSATRAGGKVCLVG  285 (364)
Q Consensus       249 ~~~~~~~d~vid~~g-----~~~~~~~~~~~l~~~G~~v~~g  285 (364)
                      ....+.+|+|+....     -...+..+.++|+|+|.++...
T Consensus       108 ~~~~~~fD~V~~~~~l~~~~~~~~l~~~~~~LkpgG~l~i~~  149 (299)
T 3g5t_A          108 SVDKQKIDMITAVECAHWFDFEKFQRSAYANLRKDGTIAIWG  149 (299)
T ss_dssp             TTTSSCEEEEEEESCGGGSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             cccCCCeeEEeHhhHHHHhCHHHHHHHHHHhcCCCcEEEEEe
Confidence            000157999986433     1567889999999999998744

>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}

Probab=95.24  E-value=0.02  Score=48.26  Aligned_cols=95  Identities=18%  Similarity=0.198  Sum_probs=66.1

Q ss_pred             CCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCC-CeEEecCCCcccHHHHHHHHHHHc-CCCcc
Q 017916          179 IGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGA-DNIVKVSTNLQDIAEEVEKIQKAM-GTGID  256 (364)
Q Consensus       179 ~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~-~~~~~~~~~~~~~~~~i~~~~~~~-~~~~d  256 (364)
                      ++++.+||-.|+|. |..+..+++. |+ .+++++.++...+.+++... ..++.-+.. ..+        ... ...+|
T Consensus        46 ~~~~~~vLDiGcG~-G~~~~~l~~~-~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~-~~~--------~~~~~~~fD  113 (226)
T 3m33_A           46 LTPQTRVLEAGCGH-GPDAARFGPQ-AA-RWAAYDFSPELLKLARANAPHADVYEWNGK-GEL--------PAGLGAPFG  113 (226)
T ss_dssp             CCTTCEEEEESCTT-SHHHHHHGGG-SS-EEEEEESCHHHHHHHHHHCTTSEEEECCSC-SSC--------CTTCCCCEE
T ss_pred             CCCCCeEEEeCCCC-CHHHHHHHHc-CC-EEEEEECCHHHHHHHHHhCCCceEEEcchh-hcc--------CCcCCCCEE
Confidence            36889999998755 6677777776 66 79999999998888877532 122221110 110        001 35799


Q ss_pred             EEEECCCCHHHHHHHHHhcccCCEEEEEc
Q 017916          257 VSFDCAGFNKTMSTALSATRAGGKVCLVG  285 (364)
Q Consensus       257 ~vid~~g~~~~~~~~~~~l~~~G~~v~~g  285 (364)
                      +|+........+..+.+.|+|+|+++..+
T Consensus       114 ~v~~~~~~~~~l~~~~~~LkpgG~l~~~~  142 (226)
T 3m33_A          114 LIVSRRGPTSVILRLPELAAPDAHFLYVG  142 (226)
T ss_dssp             EEEEESCCSGGGGGHHHHEEEEEEEEEEE
T ss_pred             EEEeCCCHHHHHHHHHHHcCCCcEEEEeC
Confidence            99987665678889999999999999443

>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}

Probab=95.24  E-value=0.057  Score=44.58  Aligned_cols=97  Identities=15%  Similarity=0.243  Sum_probs=64.3

Q ss_pred             CCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCC----CeEEecCCCcccHHHHHHHHHHHcCCC
Q 017916          179 IGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGA----DNIVKVSTNLQDIAEEVEKIQKAMGTG  254 (364)
Q Consensus       179 ~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~----~~~~~~~~~~~~~~~~i~~~~~~~~~~  254 (364)
                      ++++++||-.|+|. |..+..+++. |...+++++.++...+.+++...    ..++..+..  ++        ....+.
T Consensus        40 ~~~~~~vLdiGcG~-G~~~~~l~~~-~~~~v~~~D~s~~~~~~a~~~~~~~~~i~~~~~d~~--~~--------~~~~~~  107 (215)
T 2pxx_A           40 LRPEDRILVLGCGN-SALSYELFLG-GFPNVTSVDYSSVVVAAMQACYAHVPQLRWETMDVR--KL--------DFPSAS  107 (215)
T ss_dssp             CCTTCCEEEETCTT-CSHHHHHHHT-TCCCEEEEESCHHHHHHHHHHTTTCTTCEEEECCTT--SC--------CSCSSC
T ss_pred             cCCCCeEEEECCCC-cHHHHHHHHc-CCCcEEEEeCCHHHHHHHHHhcccCCCcEEEEcchh--cC--------CCCCCc
Confidence            47889999999765 6677777776 55479999999998888876432    122221111  10        001357


Q ss_pred             ccEEEECCC---------------------CHHHHHHHHHhcccCCEEEEEcCC
Q 017916          255 IDVSFDCAG---------------------FNKTMSTALSATRAGGKVCLVGMG  287 (364)
Q Consensus       255 ~d~vid~~g---------------------~~~~~~~~~~~l~~~G~~v~~g~~  287 (364)
                      +|+|+....                     ....+..+.+.|+++|+++.....
T Consensus       108 fD~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~  161 (215)
T 2pxx_A          108 FDVVLEKGTLDALLAGERDPWTVSSEGVHTVDQVLSEVSRVLVPGGRFISMTSA  161 (215)
T ss_dssp             EEEEEEESHHHHHTTTCSCTTSCCHHHHHHHHHHHHHHHHHEEEEEEEEEEESC
T ss_pred             ccEEEECcchhhhccccccccccccchhHHHHHHHHHHHHhCcCCCEEEEEeCC
Confidence            999986311                     135677888999999999987643

>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}

Probab=95.22  E-value=0.14  Score=47.29  Aligned_cols=96  Identities=17%  Similarity=0.141  Sum_probs=61.0

Q ss_pred             EEEEEcCCHHHHHHHHHHHHCCC--CEEEEEecChhHHHHH-HHcCC-----CeEEecCCCcccHHHHHHHHHHHcCCCc
Q 017916          184 NVLIMGAGPIGLVTMLGARAFGA--PRIVIVDVDDYRLSVA-KELGA-----DNIVKVSTNLQDIAEEVEKIQKAMGTGI  255 (364)
Q Consensus       184 ~VLI~Gag~~G~~ai~la~~~g~--~~vv~~~~~~~~~~~~-~~lg~-----~~~~~~~~~~~~~~~~i~~~~~~~~~~~  255 (364)
                      +|+|+|+|.+|..+++.+...|.  ..|++++++.++.+.+ ++++.     ...+..+-.+   .+.+.++...  .++
T Consensus         3 kVlIiGaGgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~~~~~~~~~~~~~D~~d---~~~l~~~l~~--~~~   77 (405)
T 4ina_A            3 KVLQIGAGGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKAKGYGEIDITTVDADS---IEELVALINE--VKP   77 (405)
T ss_dssp             EEEEECCSHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHHHHTTCCCCEEEECCTTC---HHHHHHHHHH--HCC
T ss_pred             EEEEECCCHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHhhhhcCCceEEEEecCCC---HHHHHHHHHh--hCC
Confidence            78999999999999998887773  3678888888776543 44431     1222222211   1233333321  158


Q ss_pred             cEEEECCCCHHHHHHHHHhcccCCEEEEE
Q 017916          256 DVSFDCAGFNKTMSTALSATRAGGKVCLV  284 (364)
Q Consensus       256 d~vid~~g~~~~~~~~~~~l~~~G~~v~~  284 (364)
                      |+||+|++.......+..++..+-.++.+
T Consensus        78 DvVin~ag~~~~~~v~~a~l~~g~~vvD~  106 (405)
T 4ina_A           78 QIVLNIALPYQDLTIMEACLRTGVPYLDT  106 (405)
T ss_dssp             SEEEECSCGGGHHHHHHHHHHHTCCEEES
T ss_pred             CEEEECCCcccChHHHHHHHHhCCCEEEe
Confidence            99999999654555566677777777765

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*

Probab=95.22  E-value=0.29  Score=43.77  Aligned_cols=76  Identities=21%  Similarity=0.254  Sum_probs=46.5

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecCh----hHHHHHHHc------CCCeEEecCCCcccHHHHHHHHHH
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDD----YRLSVAKEL------GADNIVKVSTNLQDIAEEVEKIQK  249 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~----~~~~~~~~l------g~~~~~~~~~~~~~~~~~i~~~~~  249 (364)
                      .+.+|||+|+ |.+|...++.+...|. .|++++++.    +..+.++.+      .-...+..+-.  + .+.+.+.. 
T Consensus        24 ~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~--d-~~~~~~~~-   98 (351)
T 3ruf_A           24 SPKTWLITGVAGFIGSNLLEKLLKLNQ-VVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIR--D-LTTCEQVM-   98 (351)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTT--C-HHHHHHHT-
T ss_pred             CCCeEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCC--C-HHHHHHHh-
Confidence            3579999998 9999999999998998 566666633    223333332      11122222221  2 12333332 


Q ss_pred             HcCCCccEEEECCCC
Q 017916          250 AMGTGIDVSFDCAGF  264 (364)
Q Consensus       250 ~~~~~~d~vid~~g~  264 (364)
                         .++|+||.+++.
T Consensus        99 ---~~~d~Vih~A~~  110 (351)
T 3ruf_A           99 ---KGVDHVLHQAAL  110 (351)
T ss_dssp             ---TTCSEEEECCCC
T ss_pred             ---cCCCEEEECCcc
Confidence               379999999884

>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*

Probab=95.21  E-value=0.12  Score=46.04  Aligned_cols=98  Identities=19%  Similarity=0.251  Sum_probs=64.8

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHc-CC-------CeEEecCCCcccHHHHHHHHHHHc
Q 017916          180 GPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKEL-GA-------DNIVKVSTNLQDIAEEVEKIQKAM  251 (364)
Q Consensus       180 ~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~l-g~-------~~~~~~~~~~~~~~~~i~~~~~~~  251 (364)
                      .++.+||+.|+|. |..+..+++..+...+++++.+++-.+.+++. ..       ..+...   ..|..+.+.    ..
T Consensus       115 ~~~~~VLdiG~G~-G~~~~~l~~~~~~~~v~~vDis~~~l~~ar~~~~~~~~~~~~~~v~~~---~~D~~~~l~----~~  186 (321)
T 2pt6_A          115 KEPKNVLVVGGGD-GGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVF---IEDASKFLE----NV  186 (321)
T ss_dssp             SSCCEEEEEECTT-CHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEE---ESCHHHHHH----HC
T ss_pred             CCCCEEEEEcCCc-cHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEE---EccHHHHHh----hc
Confidence            4568999998754 56677777776666899999999988888763 21       111111   123333222    12


Q ss_pred             CCCccEEE-ECC---C------CHHHHHHHHHhcccCCEEEEEc
Q 017916          252 GTGIDVSF-DCA---G------FNKTMSTALSATRAGGKVCLVG  285 (364)
Q Consensus       252 ~~~~d~vi-d~~---g------~~~~~~~~~~~l~~~G~~v~~g  285 (364)
                      .+.+|+|+ |..   +      ..+.+..+.+.|+++|.++...
T Consensus       187 ~~~fDvIi~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~  230 (321)
T 2pt6_A          187 TNTYDVIIVDSSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQC  230 (321)
T ss_dssp             CSCEEEEEEECCCSSSGGGGGSSHHHHHHHHHHEEEEEEEEEEE
T ss_pred             CCCceEEEECCcCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEc
Confidence            46799988 432   1      1577889999999999998753

>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A

Probab=95.19  E-value=0.079  Score=44.38  Aligned_cols=101  Identities=18%  Similarity=0.177  Sum_probs=63.6

Q ss_pred             HcCCCCCCEEEEEcCCHHHHHHHHHHHHCCC-CEEEEEecChhHHHHHHHc-C-CCe--EEecCCCcccHHHHHHHHHHH
Q 017916          176 RANIGPETNVLIMGAGPIGLVTMLGARAFGA-PRIVIVDVDDYRLSVAKEL-G-ADN--IVKVSTNLQDIAEEVEKIQKA  250 (364)
Q Consensus       176 ~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~-~~vv~~~~~~~~~~~~~~l-g-~~~--~~~~~~~~~~~~~~i~~~~~~  250 (364)
                      ...++++++||-.|+|. |..+..+++..|. ..+++++.+++..+.+++. . ...  ++.-+.  .+.. .   + ..
T Consensus        68 ~~~~~~~~~vLDlG~G~-G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~~~~~v~~~~~d~--~~~~-~---~-~~  139 (227)
T 1g8a_A           68 NFPIKPGKSVLYLGIAS-GTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEERRNIVPILGDA--TKPE-E---Y-RA  139 (227)
T ss_dssp             CCCCCTTCEEEEETTTS-TTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSCTTEEEEECCT--TCGG-G---G-TT
T ss_pred             hcCCCCCCEEEEEeccC-CHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHHhccCCCEEEEccC--CCcc-h---h-hc
Confidence            34578999999998865 7788888888652 4799999998765554331 1 111  221111  1100 0   0 00


Q ss_pred             cCCCccEEEECCCCH----HHHHHHHHhcccCCEEEEE
Q 017916          251 MGTGIDVSFDCAGFN----KTMSTALSATRAGGKVCLV  284 (364)
Q Consensus       251 ~~~~~d~vid~~g~~----~~~~~~~~~l~~~G~~v~~  284 (364)
                      ....+|+|+.....+    ..+..+.+.|+|+|+++..
T Consensus       140 ~~~~~D~v~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~  177 (227)
T 1g8a_A          140 LVPKVDVIFEDVAQPTQAKILIDNAEVYLKRGGYGMIA  177 (227)
T ss_dssp             TCCCEEEEEECCCSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             ccCCceEEEECCCCHhHHHHHHHHHHHhcCCCCEEEEE
Confidence            134799998654433    2378899999999999876

>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*

Probab=95.19  E-value=0.12  Score=43.76  Aligned_cols=102  Identities=17%  Similarity=0.110  Sum_probs=59.3

Q ss_pred             HHcCCCCCCEEEEEcCCHHHHHHHHHHHHCC-CCEEEEEecChhHHH----HHHHcCCCeEEecCCCcccHHHHHHHHHH
Q 017916          175 RRANIGPETNVLIMGAGPIGLVTMLGARAFG-APRIVIVDVDDYRLS----VAKELGADNIVKVSTNLQDIAEEVEKIQK  249 (364)
Q Consensus       175 ~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g-~~~vv~~~~~~~~~~----~~~~lg~~~~~~~~~~~~~~~~~i~~~~~  249 (364)
                      +...+++|++||=.|+|. |..+..+|+..| ...|++++.++.+.+    .+++..--..+.-+....+..       .
T Consensus        70 ~~~~l~~g~~VLDlG~Gt-G~~t~~la~~v~~~G~V~avD~s~~~l~~l~~~a~~r~nv~~i~~Da~~~~~~-------~  141 (232)
T 3id6_C           70 KTNPIRKGTKVLYLGAAS-GTTISHVSDIIELNGKAYGVEFSPRVVRELLLVAQRRPNIFPLLADARFPQSY-------K  141 (232)
T ss_dssp             SCCSCCTTCEEEEETCTT-SHHHHHHHHHHTTTSEEEEEECCHHHHHHHHHHHHHCTTEEEEECCTTCGGGT-------T
T ss_pred             hhcCCCCCCEEEEEeecC-CHHHHHHHHHhCCCCEEEEEECcHHHHHHHHHHhhhcCCeEEEEcccccchhh-------h
Confidence            345689999999998755 557777787665 337999999987643    223321111111111111000       0


Q ss_pred             HcCCCccEEEECCCCHH---HHH-HHHHhcccCCEEEEE
Q 017916          250 AMGTGIDVSFDCAGFNK---TMS-TALSATRAGGKVCLV  284 (364)
Q Consensus       250 ~~~~~~d~vid~~g~~~---~~~-~~~~~l~~~G~~v~~  284 (364)
                      .....+|+|+-....++   .+. .+.+.|+|+|+++..
T Consensus       142 ~~~~~~D~I~~d~a~~~~~~il~~~~~~~LkpGG~lvis  180 (232)
T 3id6_C          142 SVVENVDVLYVDIAQPDQTDIAIYNAKFFLKVNGDMLLV  180 (232)
T ss_dssp             TTCCCEEEEEECCCCTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             ccccceEEEEecCCChhHHHHHHHHHHHhCCCCeEEEEE
Confidence            01357999885544332   222 334489999999876

>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}

Probab=95.18  E-value=0.12  Score=43.13  Aligned_cols=95  Identities=14%  Similarity=0.242  Sum_probs=63.8

Q ss_pred             CCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCC-----------eEEecCCCcccHHHHHHHH
Q 017916          179 IGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGAD-----------NIVKVSTNLQDIAEEVEKI  247 (364)
Q Consensus       179 ~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~-----------~~~~~~~~~~~~~~~i~~~  247 (364)
                      ++++.+||-.|+|. |..+..+++. |. .+++++.+++..+.+++.-..           .++..+..  ++       
T Consensus        28 ~~~~~~vLdiG~G~-G~~~~~l~~~-~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~--~~-------   95 (235)
T 3sm3_A           28 LQEDDEILDIGCGS-GKISLELASK-GY-SVTGIDINSEAIRLAETAARSPGLNQKTGGKAEFKVENAS--SL-------   95 (235)
T ss_dssp             CCTTCEEEEETCTT-SHHHHHHHHT-TC-EEEEEESCHHHHHHHHHHTTCCSCCSSSSCEEEEEECCTT--SC-------
T ss_pred             CCCCCeEEEECCCC-CHHHHHHHhC-CC-eEEEEECCHHHHHHHHHHHHhcCCccccCcceEEEEeccc--cc-------
Confidence            46889999998765 6677777776 77 799999999888888763211           11111111  10       


Q ss_pred             HHHcCCCccEEEECCC-----CH----HHHHHHHHhcccCCEEEEEcC
Q 017916          248 QKAMGTGIDVSFDCAG-----FN----KTMSTALSATRAGGKVCLVGM  286 (364)
Q Consensus       248 ~~~~~~~~d~vid~~g-----~~----~~~~~~~~~l~~~G~~v~~g~  286 (364)
                       ......+|+|+....     ..    ..+..+.+.|+|+|+++....
T Consensus        96 -~~~~~~~D~v~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~  142 (235)
T 3sm3_A           96 -SFHDSSFDFAVMQAFLTSVPDPKERSRIIKEVFRVLKPGAYLYLVEF  142 (235)
T ss_dssp             -CSCTTCEEEEEEESCGGGCCCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             -CCCCCceeEEEEcchhhcCCCHHHHHHHHHHHHHHcCCCeEEEEEEC
Confidence             001357999985321     22    578889999999999988753

>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*

Probab=95.18  E-value=0.046  Score=46.94  Aligned_cols=97  Identities=14%  Similarity=0.055  Sum_probs=62.0

Q ss_pred             CCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHH-cCC--------------------CeEEecCCC
Q 017916          178 NIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKE-LGA--------------------DNIVKVSTN  236 (364)
Q Consensus       178 ~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~-lg~--------------------~~~~~~~~~  236 (364)
                      ..+++.+||..|+|. |..+..||+. |+ .|++++.++...+.+++ .+.                    ..+--+.  
T Consensus        65 ~~~~~~~vLD~GCG~-G~~~~~La~~-G~-~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~--  139 (252)
T 2gb4_A           65 KGQSGLRVFFPLCGK-AIEMKWFADR-GH-TVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYC--  139 (252)
T ss_dssp             TTCCSCEEEETTCTT-CTHHHHHHHT-TC-EEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEE--
T ss_pred             cCCCCCeEEEeCCCC-cHHHHHHHHC-CC-eEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCceEEEE--
Confidence            346789999998765 6677777765 88 79999999998888754 321                    1111010  


Q ss_pred             cccHHHHHHHHHHHcCCCccEEEECCC-----C---HHHHHHHHHhcccCCEEEEE
Q 017916          237 LQDIAEEVEKIQKAMGTGIDVSFDCAG-----F---NKTMSTALSATRAGGKVCLV  284 (364)
Q Consensus       237 ~~~~~~~i~~~~~~~~~~~d~vid~~g-----~---~~~~~~~~~~l~~~G~~v~~  284 (364)
                       .|+.    ++.....+.||+|++...     .   ...+..+.+.|+|+|+++..
T Consensus       140 -~D~~----~l~~~~~~~FD~V~~~~~l~~l~~~~~~~~l~~~~~~LkpGG~l~l~  190 (252)
T 2gb4_A          140 -CSIF----DLPRANIGKFDRIWDRGALVAINPGDHDRYADIILSLLRKEFQYLVA  190 (252)
T ss_dssp             -SCTT----TGGGGCCCCEEEEEESSSTTTSCGGGHHHHHHHHHHTEEEEEEEEEE
T ss_pred             -Cccc----cCCcccCCCEEEEEEhhhhhhCCHHHHHHHHHHHHHHcCCCeEEEEE
Confidence             1111    111111257999997422     1   24677889999999998644

>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}

Probab=95.18  E-value=0.084  Score=46.88  Aligned_cols=89  Identities=19%  Similarity=0.200  Sum_probs=63.7

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcCCCccEEE
Q 017916          180 GPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF  259 (364)
Q Consensus       180 ~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vi  259 (364)
                      -.|.+|.|.|.|.+|...++.++.+|+ .|++.+++.++. ...++|+..    .    ++.+    +.    ...|+|+
T Consensus       140 l~g~~vgIIG~G~IG~~~A~~l~~~G~-~V~~~d~~~~~~-~~~~~g~~~----~----~l~e----ll----~~aDvVv  201 (313)
T 2ekl_A          140 LAGKTIGIVGFGRIGTKVGIIANAMGM-KVLAYDILDIRE-KAEKINAKA----V----SLEE----LL----KNSDVIS  201 (313)
T ss_dssp             CTTCEEEEESCSHHHHHHHHHHHHTTC-EEEEECSSCCHH-HHHHTTCEE----C----CHHH----HH----HHCSEEE
T ss_pred             CCCCEEEEEeeCHHHHHHHHHHHHCCC-EEEEECCCcchh-HHHhcCcee----c----CHHH----HH----hhCCEEE
Confidence            357899999999999999999999999 688888777654 456677542    1    2222    22    2479999


Q ss_pred             ECCCCHH----HH-HHHHHhcccCCEEEEEcC
Q 017916          260 DCAGFNK----TM-STALSATRAGGKVCLVGM  286 (364)
Q Consensus       260 d~~g~~~----~~-~~~~~~l~~~G~~v~~g~  286 (364)
                      .++....    .+ ...+..|++++.++.++.
T Consensus       202 l~~P~~~~t~~li~~~~l~~mk~ga~lIn~ar  233 (313)
T 2ekl_A          202 LHVTVSKDAKPIIDYPQFELMKDNVIIVNTSR  233 (313)
T ss_dssp             ECCCCCTTSCCSBCHHHHHHSCTTEEEEESSC
T ss_pred             EeccCChHHHHhhCHHHHhcCCCCCEEEECCC
Confidence            8876322    11 356788999998888765

>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}

Probab=95.18  E-value=0.028  Score=48.05  Aligned_cols=78  Identities=19%  Similarity=0.258  Sum_probs=50.6

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecCh--hHHHHHHHcCCCeE-EecCCCcccHHHHHHHHHHHcCCCcc
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDD--YRLSVAKELGADNI-VKVSTNLQDIAEEVEKIQKAMGTGID  256 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~--~~~~~~~~lg~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~d  256 (364)
                      .|.++||+|+ +++|.+.++.+...|+ .|+.++.+.  +..+.+++.|.... +..|-.+++   .++++..  .+++|
T Consensus         8 ~GKvalVTGas~GIG~aiA~~la~~Ga-~Vvi~~r~~~~~~~~~~~~~g~~~~~~~~Dv~d~~---~v~~~~~--~g~iD   81 (247)
T 4hp8_A            8 EGRKALVTGANTGLGQAIAVGLAAAGA-EVVCAARRAPDETLDIIAKDGGNASALLIDFADPL---AAKDSFT--DAGFD   81 (247)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSCCHHHHHHHHHTTCCEEEEECCTTSTT---TTTTSST--TTCCC
T ss_pred             CCCEEEEeCcCCHHHHHHHHHHHHcCC-EEEEEeCCcHHHHHHHHHHhCCcEEEEEccCCCHH---HHHHHHH--hCCCC
Confidence            5889999987 9999999999999999 566666653  34556666665432 222211111   1222211  35799


Q ss_pred             EEEECCCC
Q 017916          257 VSFDCAGF  264 (364)
Q Consensus       257 ~vid~~g~  264 (364)
                      ++++++|.
T Consensus        82 iLVNNAGi   89 (247)
T 4hp8_A           82 ILVNNAGI   89 (247)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCC
Confidence            99999884

>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*

Probab=95.17  E-value=0.11  Score=46.63  Aligned_cols=78  Identities=19%  Similarity=0.305  Sum_probs=50.1

Q ss_pred             CCCCEEEEEcC-CHHHHHHHHHHHHC-CCCEEEEEecChhHHHHHH-HcCCC--eEEecCCCcccHHHHHHHHHHHcCCC
Q 017916          180 GPETNVLIMGA-GPIGLVTMLGARAF-GAPRIVIVDVDDYRLSVAK-ELGAD--NIVKVSTNLQDIAEEVEKIQKAMGTG  254 (364)
Q Consensus       180 ~~g~~VLI~Ga-g~~G~~ai~la~~~-g~~~vv~~~~~~~~~~~~~-~lg~~--~~~~~~~~~~~~~~~i~~~~~~~~~~  254 (364)
                      -.+.+|||+|+ |.+|...++.+... |...|++++++..+.+.+. .+...  ..+..+-  .+ .+.+++..    .+
T Consensus        19 ~~~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~~~~~~~~v~~~~~Dl--~d-~~~l~~~~----~~   91 (344)
T 2gn4_A           19 LDNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFNDPRMRFFIGDV--RD-LERLNYAL----EG   91 (344)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHHHHHCCTTEEEEECCT--TC-HHHHHHHT----TT
T ss_pred             hCCCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECChhhHHHHHHHhcCCCEEEEECCC--CC-HHHHHHHH----hc
Confidence            35789999998 99999999888777 8756788888777655443 34321  1222221  12 12333332    47


Q ss_pred             ccEEEECCCC
Q 017916          255 IDVSFDCAGF  264 (364)
Q Consensus       255 ~d~vid~~g~  264 (364)
                      +|+||.+++.
T Consensus        92 ~D~Vih~Aa~  101 (344)
T 2gn4_A           92 VDICIHAAAL  101 (344)
T ss_dssp             CSEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999874

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}

Probab=95.17  E-value=0.087  Score=45.11  Aligned_cols=82  Identities=17%  Similarity=0.089  Sum_probs=49.9

Q ss_pred             CCEEEEEcC-CHHHHHHHHHHHHCCC-CEEEEEecChhHHHHH-HHcCCCe-EEecCC-CcccHHHHHHHHHHHcCCCcc
Q 017916          182 ETNVLIMGA-GPIGLVTMLGARAFGA-PRIVIVDVDDYRLSVA-KELGADN-IVKVST-NLQDIAEEVEKIQKAMGTGID  256 (364)
Q Consensus       182 g~~VLI~Ga-g~~G~~ai~la~~~g~-~~vv~~~~~~~~~~~~-~~lg~~~-~~~~~~-~~~~~~~~i~~~~~~~~~~~d  256 (364)
                      |.++||+|+ +++|.+.++.+...|+ ..|+.+.++.++.+.+ ++++... .+..|- ..+++.+.++++.+.. +++|
T Consensus         2 gk~~lVTGas~GIG~aia~~l~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-g~id   80 (254)
T 3kzv_A            2 GKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKYGDRFFYVVGDITEDSVLKQLVNAAVKGH-GKID   80 (254)
T ss_dssp             CCEEEECSTTSHHHHHHHHHHHHHCSSCEEEEEESCHHHHHHHHHHHGGGEEEEESCTTSHHHHHHHHHHHHHHH-SCCC
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCCeEEEEecCCHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHhc-CCcc
Confidence            568999998 9999988877666653 2677777777765544 4454322 222222 2233444444443333 4799


Q ss_pred             EEEECCCC
Q 017916          257 VSFDCAGF  264 (364)
Q Consensus       257 ~vid~~g~  264 (364)
                      ++|+++|.
T Consensus        81 ~lvnnAg~   88 (254)
T 3kzv_A           81 SLVANAGV   88 (254)
T ss_dssp             EEEEECCC
T ss_pred             EEEECCcc
Confidence            99998874

>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*

Probab=95.15  E-value=0.12  Score=43.58  Aligned_cols=104  Identities=18%  Similarity=0.195  Sum_probs=68.3

Q ss_pred             HHHHHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHH----cCCCeEEecCCCcccHHHHHHHH
Q 017916          172 HACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKE----LGADNIVKVSTNLQDIAEEVEKI  247 (364)
Q Consensus       172 ~~l~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~i~~~  247 (364)
                      ..++..+++++.+||-.|+|. |..+..+++.. . .+++++.+++..+.+++    .+...+......-.++.      
T Consensus        12 ~~~~~~~~~~~~~vLDiGcG~-G~~~~~l~~~~-~-~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~------   82 (239)
T 1xxl_A           12 LMIKTAECRAEHRVLDIGAGA-GHTALAFSPYV-Q-ECIGVDATKEMVEVASSFAQEKGVENVRFQQGTAESLP------   82 (239)
T ss_dssp             HHHHHHTCCTTCEEEEESCTT-SHHHHHHGGGS-S-EEEEEESCHHHHHHHHHHHHHHTCCSEEEEECBTTBCC------
T ss_pred             hHHHHhCcCCCCEEEEEccCc-CHHHHHHHHhC-C-EEEEEECCHHHHHHHHHHHHHcCCCCeEEEecccccCC------
Confidence            345677889999999998765 66777777654 4 79999999887776654    24332211111111110      


Q ss_pred             HHHcCCCccEEEECCC------CHHHHHHHHHhcccCCEEEEEcC
Q 017916          248 QKAMGTGIDVSFDCAG------FNKTMSTALSATRAGGKVCLVGM  286 (364)
Q Consensus       248 ~~~~~~~~d~vid~~g------~~~~~~~~~~~l~~~G~~v~~g~  286 (364)
                        ...+.+|+|+....      -...+..+.+.|+|+|+++....
T Consensus        83 --~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~  125 (239)
T 1xxl_A           83 --FPDDSFDIITCRYAAHHFSDVRKAVREVARVLKQDGRFLLVDH  125 (239)
T ss_dssp             --SCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             --CCCCcEEEEEECCchhhccCHHHHHHHHHHHcCCCcEEEEEEc
Confidence              01357999987532      14677889999999999988753

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}

Probab=95.15  E-value=0.1  Score=46.53  Aligned_cols=83  Identities=27%  Similarity=0.374  Sum_probs=50.1

Q ss_pred             CCCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecC----------hhHH-HH---HHHcCCCeE-EecCC-CcccHHH
Q 017916          180 GPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVD----------DYRL-SV---AKELGADNI-VKVST-NLQDIAE  242 (364)
Q Consensus       180 ~~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~----------~~~~-~~---~~~lg~~~~-~~~~~-~~~~~~~  242 (364)
                      -.|.++||+|+ +++|.+.+..+...|+ .|+.++++          .++. +.   ++..+.... +..+- ..+++.+
T Consensus        25 l~gk~vlVTGas~GIG~aia~~la~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~  103 (322)
T 3qlj_A           25 VDGRVVIVTGAGGGIGRAHALAFAAEGA-RVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAVADGSNVADWDQAAG  103 (322)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTCEEEEECCCTTSHHHHHH
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCcccccccccccHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHH
Confidence            35789999998 9999999999988999 56776654          2222 22   233343221 11221 2233333


Q ss_pred             HHHHHHHHcCCCccEEEECCCC
Q 017916          243 EVEKIQKAMGTGIDVSFDCAGF  264 (364)
Q Consensus       243 ~i~~~~~~~~~~~d~vid~~g~  264 (364)
                      .++.+.+.. +++|++|+++|.
T Consensus       104 ~~~~~~~~~-g~iD~lv~nAg~  124 (322)
T 3qlj_A          104 LIQTAVETF-GGLDVLVNNAGI  124 (322)
T ss_dssp             HHHHHHHHH-SCCCEEECCCCC
T ss_pred             HHHHHHHHc-CCCCEEEECCCC
Confidence            344443332 479999999883

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}

Probab=95.15  E-value=0.015  Score=50.54  Aligned_cols=77  Identities=21%  Similarity=0.259  Sum_probs=46.5

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcCCCccEEE
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF  259 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vi  259 (364)
                      .|.++||+|+ +++|.+.++.+...|+ .|+.++++.++.+....+.    .|.. ...+..+.++.+.... +++|++|
T Consensus        27 ~gk~vlVTGas~gIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~----~Dv~-~~~~~~~~~~~~~~~~-g~iD~lv   99 (266)
T 3uxy_A           27 EGKVALVTGAAGGIGGAVVTALRAAGA-RVAVADRAVAGIAADLHLP----GDLR-EAAYADGLPGAVAAGL-GRLDIVV   99 (266)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTC-EEEECSSCCTTSCCSEECC----CCTT-SHHHHHHHHHHHHHHH-SCCCEEE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHhhhccC----cCCC-CHHHHHHHHHHHHHhc-CCCCEEE
Confidence            5789999998 9999999999989999 5777766554322110000    1111 1122222333333222 4799999


Q ss_pred             ECCCC
Q 017916          260 DCAGF  264 (364)
Q Consensus       260 d~~g~  264 (364)
                      +++|.
T Consensus       100 nnAg~  104 (266)
T 3uxy_A          100 NNAGV  104 (266)
T ss_dssp             ECCCC
T ss_pred             ECCCC
Confidence            99883

>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6

Probab=95.14  E-value=0.17  Score=44.39  Aligned_cols=86  Identities=14%  Similarity=0.132  Sum_probs=60.0

Q ss_pred             EEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcCCCccEEEECCC
Q 017916          184 NVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAG  263 (364)
Q Consensus       184 ~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid~~g  263 (364)
                      +|.|.|+|.+|...+..+...|. .|.+.++++++.+.+.+.|...   +    .+..+.+        .+.|+||.|+.
T Consensus         7 ~i~iiG~G~~G~~~a~~l~~~g~-~V~~~~~~~~~~~~~~~~g~~~---~----~~~~~~~--------~~~D~vi~~v~   70 (299)
T 1vpd_A            7 KVGFIGLGIMGKPMSKNLLKAGY-SLVVSDRNPEAIADVIAAGAET---A----STAKAIA--------EQCDVIITMLP   70 (299)
T ss_dssp             EEEEECCSTTHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCEE---C----SSHHHHH--------HHCSEEEECCS
T ss_pred             eEEEECchHHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHCCCee---c----CCHHHHH--------hCCCEEEEECC
Confidence            79999999999998888888898 5788888888887777666431   1    1222211        24799999998


Q ss_pred             CHHHHHHHH-------HhcccCCEEEEEc
Q 017916          264 FNKTMSTAL-------SATRAGGKVCLVG  285 (364)
Q Consensus       264 ~~~~~~~~~-------~~l~~~G~~v~~g  285 (364)
                      .+......+       ..++++..++.++
T Consensus        71 ~~~~~~~~~~~~~~l~~~l~~~~~vv~~s   99 (299)
T 1vpd_A           71 NSPHVKEVALGENGIIEGAKPGTVLIDMS   99 (299)
T ss_dssp             SHHHHHHHHHSTTCHHHHCCTTCEEEECS
T ss_pred             CHHHHHHHHhCcchHhhcCCCCCEEEECC
Confidence            655555444       4566777666654

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*

Probab=95.14  E-value=0.12  Score=43.71  Aligned_cols=73  Identities=18%  Similarity=0.084  Sum_probs=46.7

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHC--CCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcCCCccE
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAF--GAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDV  257 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~--g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~  257 (364)
                      .+.+|||+|+ |.+|...++.+...  |+ .|+++++++++.+.+ .-++. .+..+-.  + .+.+.++.    .++|+
T Consensus         3 ~~~~ilVtGasG~iG~~l~~~l~~~~~g~-~V~~~~r~~~~~~~~-~~~~~-~~~~D~~--d-~~~~~~~~----~~~d~   72 (253)
T 1xq6_A            3 NLPTVLVTGASGRTGQIVYKKLKEGSDKF-VAKGLVRSAQGKEKI-GGEAD-VFIGDIT--D-ADSINPAF----QGIDA   72 (253)
T ss_dssp             SCCEEEEESTTSHHHHHHHHHHHHTTTTC-EEEEEESCHHHHHHT-TCCTT-EEECCTT--S-HHHHHHHH----TTCSE
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHhcCCCc-EEEEEEcCCCchhhc-CCCee-EEEecCC--C-HHHHHHHH----cCCCE
Confidence            4678999998 99999999998888  67 677777776654332 11222 2222211  1 22343332    36999


Q ss_pred             EEECCC
Q 017916          258 SFDCAG  263 (364)
Q Consensus       258 vid~~g  263 (364)
                      +|.++|
T Consensus        73 vi~~a~   78 (253)
T 1xq6_A           73 LVILTS   78 (253)
T ss_dssp             EEECCC
T ss_pred             EEEecc
Confidence            999887

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}

Probab=95.14  E-value=0.11  Score=44.81  Aligned_cols=82  Identities=17%  Similarity=0.275  Sum_probs=48.6

Q ss_pred             CCCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEe-cChhHHHH-HH---HcCCC-eEEecCCC-cccHHHHHHHHHHHc
Q 017916          180 GPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVD-VDDYRLSV-AK---ELGAD-NIVKVSTN-LQDIAEEVEKIQKAM  251 (364)
Q Consensus       180 ~~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~-~~~~~~~~-~~---~lg~~-~~~~~~~~-~~~~~~~i~~~~~~~  251 (364)
                      ..+.++||+|+ +++|.+.++.+...|++ |+.++ .+.++.+. .+   ..+.. ..+..|-. .++..+.++.+.+..
T Consensus        23 ~~~k~vlITGas~gIG~~~a~~l~~~G~~-v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  101 (269)
T 3gk3_A           23 QAKRVAFVTGGMGGLGAAISRRLHDAGMA-VAVSHSERNDHVSTWLMHERDAGRDFKAYAVDVADFESCERCAEKVLADF  101 (269)
T ss_dssp             -CCCEEEETTTTSHHHHHHHHHHHTTTCE-EEEEECSCHHHHHHHHHHHHTTTCCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             hcCCEEEEECCCchHHHHHHHHHHHCCCE-EEEEcCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHc
Confidence            35678999998 99999999999899995 55554 44443322 22   22322 22222222 233333444443332


Q ss_pred             CCCccEEEECCC
Q 017916          252 GTGIDVSFDCAG  263 (364)
Q Consensus       252 ~~~~d~vid~~g  263 (364)
                       +++|++|+++|
T Consensus       102 -g~id~li~nAg  112 (269)
T 3gk3_A          102 -GKVDVLINNAG  112 (269)
T ss_dssp             -SCCSEEEECCC
T ss_pred             -CCCCEEEECCC
Confidence             47999999987

>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}

Probab=95.12  E-value=0.2  Score=43.65  Aligned_cols=87  Identities=15%  Similarity=0.134  Sum_probs=58.5

Q ss_pred             CEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcCCCccEEEECC
Q 017916          183 TNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCA  262 (364)
Q Consensus       183 ~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid~~  262 (364)
                      .+|.|.|.|.+|...++.+...|. .|.+.++++++.+.+.+.|+...       .+..+.+        ...|+||-|+
T Consensus         2 ~~i~iIG~G~mG~~~a~~l~~~G~-~V~~~dr~~~~~~~~~~~g~~~~-------~~~~~~~--------~~aDvvi~~v   65 (287)
T 3pef_A            2 QKFGFIGLGIMGSAMAKNLVKAGC-SVTIWNRSPEKAEELAALGAERA-------ATPCEVV--------ESCPVTFAML   65 (287)
T ss_dssp             CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSGGGGHHHHHTTCEEC-------SSHHHHH--------HHCSEEEECC
T ss_pred             CEEEEEeecHHHHHHHHHHHHCCC-eEEEEcCCHHHHHHHHHCCCeec-------CCHHHHH--------hcCCEEEEEc
Confidence            478999999999999998888898 67888999888887777665321       1222211        1357888887


Q ss_pred             CCHHHHHHHH-------HhcccCCEEEEEc
Q 017916          263 GFNKTMSTAL-------SATRAGGKVCLVG  285 (364)
Q Consensus       263 g~~~~~~~~~-------~~l~~~G~~v~~g  285 (364)
                      ..+......+       ..++++..++..+
T Consensus        66 p~~~~~~~v~~~~~~l~~~l~~~~~vi~~s   95 (287)
T 3pef_A           66 ADPAAAEEVCFGKHGVLEGIGEGRGYVDMS   95 (287)
T ss_dssp             SSHHHHHHHHHSTTCHHHHCCTTCEEEECS
T ss_pred             CCHHHHHHHHcCcchHhhcCCCCCEEEeCC
Confidence            7544444433       4556666565553

>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}

Probab=95.11  E-value=0.12  Score=47.69  Aligned_cols=88  Identities=24%  Similarity=0.234  Sum_probs=54.7

Q ss_pred             HcCC-CCCCEEEEEcC-CHHHHHHHHHHHH-CCCCEEEEEecChhH----------------HHHHHHcCCCe-EEecCC
Q 017916          176 RANI-GPETNVLIMGA-GPIGLVTMLGARA-FGAPRIVIVDVDDYR----------------LSVAKELGADN-IVKVST  235 (364)
Q Consensus       176 ~~~~-~~g~~VLI~Ga-g~~G~~ai~la~~-~g~~~vv~~~~~~~~----------------~~~~~~lg~~~-~~~~~~  235 (364)
                      ...+ +.+.++||+|+ +++|.+.+..+.. .|+ .|++++.+.+.                .+.+++.|... .+..+-
T Consensus        54 ~~~~~~~gKvaLVTGASsGIG~AiA~~LA~~~GA-~Vv~~~r~~~~~~~~~~~ag~~n~~a~~~~~~~~G~~a~~i~~Dv  132 (422)
T 3s8m_A           54 RGVRNDGPKKVLVIGASSGYGLASRITAAFGFGA-DTLGVFFEKPGTASKAGTAGWYNSAAFDKHAKAAGLYSKSINGDA  132 (422)
T ss_dssp             TCCCSSSCSEEEEESCSSHHHHHHHHHHHHHHCC-EEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHTTCCEEEEESCT
T ss_pred             ccccccCCCEEEEECCChHHHHHHHHHHHHhCCC-EEEEEeCCchhhhhhhcccccchhHHHHHHHHhcCCcEEEEEecC
Confidence            3455 35678899998 9999988888877 999 56666544321                14455666543 232232


Q ss_pred             -CcccHHHHHHHHHHHcCCCccEEEECCCC
Q 017916          236 -NLQDIAEEVEKIQKAMGTGIDVSFDCAGF  264 (364)
Q Consensus       236 -~~~~~~~~i~~~~~~~~~~~d~vid~~g~  264 (364)
                       ..++..+.+..+.+..++++|++++++|.
T Consensus       133 td~~~v~~~v~~i~~~~~G~IDiLVNNAG~  162 (422)
T 3s8m_A          133 FSDAARAQVIELIKTEMGGQVDLVVYSLAS  162 (422)
T ss_dssp             TSHHHHHHHHHHHHHHSCSCEEEEEECCCC
T ss_pred             CCHHHHHHHHHHHHHHcCCCCCEEEEcCcc
Confidence             22344444555444442689999999875

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2

Probab=95.10  E-value=0.11  Score=44.80  Aligned_cols=81  Identities=20%  Similarity=0.248  Sum_probs=49.5

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEec-ChhHHHH----HHHcCCCe-EEecCCC-cccHHHHHHHHHHHcC
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDV-DDYRLSV----AKELGADN-IVKVSTN-LQDIAEEVEKIQKAMG  252 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~-~~~~~~~----~~~lg~~~-~~~~~~~-~~~~~~~i~~~~~~~~  252 (364)
                      .+.+|||+|+ |.+|.+.++.+...|+ .|+++++ +.++.+.    ++..+... .+..|-. .+++.+.++.+.... 
T Consensus        20 ~~k~vlItGasggiG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-   97 (274)
T 1ja9_A           20 AGKVALTTGAGRGIGRGIAIELGRRGA-SVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSHF-   97 (274)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH-
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEcCCchHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHc-
Confidence            4679999998 9999999999988999 5666666 5554432    22334432 2222222 223333343333222 


Q ss_pred             CCccEEEECCC
Q 017916          253 TGIDVSFDCAG  263 (364)
Q Consensus       253 ~~~d~vid~~g  263 (364)
                      +++|++|+++|
T Consensus        98 ~~~d~vi~~Ag  108 (274)
T 1ja9_A           98 GGLDFVMSNSG  108 (274)
T ss_dssp             SCEEEEECCCC
T ss_pred             CCCCEEEECCC
Confidence            37999999887

>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}

Probab=95.07  E-value=0.22  Score=44.30  Aligned_cols=88  Identities=15%  Similarity=0.184  Sum_probs=59.8

Q ss_pred             CCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcCCCccEEEEC
Q 017916          182 ETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDC  261 (364)
Q Consensus       182 g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid~  261 (364)
                      ..+|.|.|.|.+|...++.+...|. .|.+.++++++.+.+.+.|+...       .+..    +..    ...|+||-|
T Consensus        31 ~~~I~iIG~G~mG~~~a~~l~~~G~-~V~~~dr~~~~~~~l~~~g~~~~-------~~~~----e~~----~~aDvVi~~   94 (320)
T 4dll_A           31 ARKITFLGTGSMGLPMARRLCEAGY-ALQVWNRTPARAASLAALGATIH-------EQAR----AAA----RDADIVVSM   94 (320)
T ss_dssp             CSEEEEECCTTTHHHHHHHHHHTTC-EEEEECSCHHHHHHHHTTTCEEE-------SSHH----HHH----TTCSEEEEC
T ss_pred             CCEEEEECccHHHHHHHHHHHhCCC-eEEEEcCCHHHHHHHHHCCCEee-------CCHH----HHH----hcCCEEEEE
Confidence            4589999999999999998888898 68888999988887777665321       1111    111    356888888


Q ss_pred             CCCHHHHHHHH------HhcccCCEEEEEc
Q 017916          262 AGFNKTMSTAL------SATRAGGKVCLVG  285 (364)
Q Consensus       262 ~g~~~~~~~~~------~~l~~~G~~v~~g  285 (364)
                      +..+......+      ..+.++..++..+
T Consensus        95 vp~~~~~~~v~~~~~~~~~l~~~~~vi~~s  124 (320)
T 4dll_A           95 LENGAVVQDVLFAQGVAAAMKPGSLFLDMA  124 (320)
T ss_dssp             CSSHHHHHHHHTTTCHHHHCCTTCEEEECS
T ss_pred             CCCHHHHHHHHcchhHHhhCCCCCEEEecC
Confidence            77654444433      2455666666554

>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A

Probab=95.07  E-value=0.046  Score=49.69  Aligned_cols=91  Identities=18%  Similarity=0.259  Sum_probs=64.0

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcCCCccEEEE
Q 017916          181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  260 (364)
Q Consensus       181 ~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid  260 (364)
                      .|.+|.|.|.|.+|...++.++.+|++.|++.+++..+.+...++|+..   .    .++.    ++.    ...|+|+.
T Consensus       163 ~g~tvgIIG~G~IG~~vA~~l~~~G~~~V~~~d~~~~~~~~~~~~g~~~---~----~~l~----ell----~~aDvV~l  227 (364)
T 2j6i_A          163 EGKTIATIGAGRIGYRVLERLVPFNPKELLYYDYQALPKDAEEKVGARR---V----ENIE----ELV----AQADIVTV  227 (364)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHGGGCCSEEEEECSSCCCHHHHHHTTEEE---C----SSHH----HHH----HTCSEEEE
T ss_pred             CCCEEEEECcCHHHHHHHHHHHhCCCcEEEEECCCccchhHHHhcCcEe---c----CCHH----HHH----hcCCEEEE
Confidence            6789999999999999999999999953788887766666667777532   1    1222    222    25789988


Q ss_pred             CCCCH----HHH-HHHHHhcccCCEEEEEcC
Q 017916          261 CAGFN----KTM-STALSATRAGGKVCLVGM  286 (364)
Q Consensus       261 ~~g~~----~~~-~~~~~~l~~~G~~v~~g~  286 (364)
                      ++...    ..+ ...+..|++++.++.++.
T Consensus       228 ~~P~t~~t~~li~~~~l~~mk~ga~lIn~ar  258 (364)
T 2j6i_A          228 NAPLHAGTKGLINKELLSKFKKGAWLVNTAR  258 (364)
T ss_dssp             CCCCSTTTTTCBCHHHHTTSCTTEEEEECSC
T ss_pred             CCCCChHHHHHhCHHHHhhCCCCCEEEECCC
Confidence            77642    122 246678888888887764

>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}

Probab=95.04  E-value=0.085  Score=45.04  Aligned_cols=102  Identities=21%  Similarity=0.199  Sum_probs=68.9

Q ss_pred             HHHHHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCC-CeEEecCCCcccHHHHHHHHHHH
Q 017916          172 HACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGA-DNIVKVSTNLQDIAEEVEKIQKA  250 (364)
Q Consensus       172 ~~l~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~-~~~~~~~~~~~~~~~~i~~~~~~  250 (364)
                      ..++.....++.+||-.|+|. |..+..+++......+++++.+++..+.+++... ..++..+.  .++       .  
T Consensus        24 ~l~~~~~~~~~~~vLdiG~G~-G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~d~--~~~-------~--   91 (259)
T 2p35_A           24 DLLAQVPLERVLNGYDLGCGP-GNSTELLTDRYGVNVITGIDSDDDMLEKAADRLPNTNFGKADL--ATW-------K--   91 (259)
T ss_dssp             HHHTTCCCSCCSSEEEETCTT-THHHHHHHHHHCTTSEEEEESCHHHHHHHHHHSTTSEEEECCT--TTC-------C--
T ss_pred             HHHHhcCCCCCCEEEEecCcC-CHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhCCCcEEEECCh--hhc-------C--
Confidence            445566678899999998764 6777788877633379999999998888876522 12222111  111       0  


Q ss_pred             cCCCccEEEECCC------CHHHHHHHHHhcccCCEEEEEc
Q 017916          251 MGTGIDVSFDCAG------FNKTMSTALSATRAGGKVCLVG  285 (364)
Q Consensus       251 ~~~~~d~vid~~g------~~~~~~~~~~~l~~~G~~v~~g  285 (364)
                      ....+|+|+....      ....+..+.+.|+|+|+++...
T Consensus        92 ~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~  132 (259)
T 2p35_A           92 PAQKADLLYANAVFQWVPDHLAVLSQLMDQLESGGVLAVQM  132 (259)
T ss_dssp             CSSCEEEEEEESCGGGSTTHHHHHHHHGGGEEEEEEEEEEE
T ss_pred             ccCCcCEEEEeCchhhCCCHHHHHHHHHHhcCCCeEEEEEe
Confidence            1357999987542      2456778889999999998764

>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*

Probab=95.03  E-value=0.15  Score=45.19  Aligned_cols=98  Identities=21%  Similarity=0.196  Sum_probs=64.0

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHc-C--------CCeEEecCCCcccHHHHHHHHHHH
Q 017916          180 GPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKEL-G--------ADNIVKVSTNLQDIAEEVEKIQKA  250 (364)
Q Consensus       180 ~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~l-g--------~~~~~~~~~~~~~~~~~i~~~~~~  250 (364)
                      .++.+||+.|+|. |..+..+++..+...+++++.+++-.+.+++. .        ...+...   ..|..+.+.    .
T Consensus        76 ~~~~~VLdiG~G~-G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~---~~D~~~~l~----~  147 (314)
T 1uir_A           76 PEPKRVLIVGGGE-GATLREVLKHPTVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLV---IDDARAYLE----R  147 (314)
T ss_dssp             SCCCEEEEEECTT-SHHHHHHTTSTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEE---ESCHHHHHH----H
T ss_pred             CCCCeEEEEcCCc-CHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccccCCceEEE---EchHHHHHH----h
Confidence            4568999998754 56677777776666899999999888777652 1        1111111   123332222    2


Q ss_pred             cCCCccEEEE-CC------C------CHHHHHHHHHhcccCCEEEEEc
Q 017916          251 MGTGIDVSFD-CA------G------FNKTMSTALSATRAGGKVCLVG  285 (364)
Q Consensus       251 ~~~~~d~vid-~~------g------~~~~~~~~~~~l~~~G~~v~~g  285 (364)
                      ..+.+|+|+. ..      +      ..+.+..+.++|+++|.++...
T Consensus       148 ~~~~fD~Ii~d~~~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~  195 (314)
T 1uir_A          148 TEERYDVVIIDLTDPVGEDNPARLLYTVEFYRLVKAHLNPGGVMGMQT  195 (314)
T ss_dssp             CCCCEEEEEEECCCCBSTTCGGGGGSSHHHHHHHHHTEEEEEEEEEEE
T ss_pred             cCCCccEEEECCCCcccccCcchhccHHHHHHHHHHhcCCCcEEEEEc
Confidence            2567999874 32      2      2467889999999999998763

>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}

Probab=95.02  E-value=0.097  Score=47.56  Aligned_cols=105  Identities=16%  Similarity=0.169  Sum_probs=67.5

Q ss_pred             HHHHHHHcCCC-CCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecCh----h--------HHHHHHHcCCCeEEecCCC
Q 017916          170 GLHACRRANIG-PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDD----Y--------RLSVAKELGADNIVKVSTN  236 (364)
Q Consensus       170 a~~~l~~~~~~-~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~----~--------~~~~~~~lg~~~~~~~~~~  236 (364)
                      -+.+++..+.+ +..+|+|.|+|..|..+++++..+|++.|+.++++.    .        +..+++....     + ..
T Consensus       175 ll~al~l~g~~l~d~kVVi~GAGaAG~~iA~ll~~~Ga~~I~v~D~~Gli~~~R~~~L~~~k~~fa~~~~~-----~-~~  248 (398)
T 2a9f_A          175 IFNSLKLLKKSLDEVSIVVNGGGSAGLSITRKLLAAGATKVTVVDKFGIINEQEAAQLAPHHLDIAKVTNR-----E-FK  248 (398)
T ss_dssp             HHHHHHTTTCCTTSCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETTEECCTTCCCSCCC---CHHHHHSC-----T-TC
T ss_pred             HHHHHHHhCCCCCccEEEEECCCHHHHHHHHHHHHcCCCeEEEEECCCcccCCccccchHHHHHHhhccCc-----c-cc
Confidence            33444543333 457999999999999999999999998899998752    1        1222222110     0 11


Q ss_pred             cccHHHHHHHHHHHcCCCccEEEECCCCHHHHHHHHHhcccCCEEEEEcCCC
Q 017916          237 LQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGH  288 (364)
Q Consensus       237 ~~~~~~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~  288 (364)
                      ..++.+.+        .+.|++|-+++..-.-+++++.|+++..++.++.+.
T Consensus       249 ~~~L~eav--------~~ADV~IG~Sapgl~T~EmVk~Ma~~pIIfalsNPt  292 (398)
T 2a9f_A          249 SGTLEDAL--------EGADIFIGVSAPGVLKAEWISKMAARPVIFAMANPI  292 (398)
T ss_dssp             CCSCSHHH--------HTTCSEEECCSTTCCCHHHHHTSCSSCEEEECCSSS
T ss_pred             hhhHHHHh--------ccCCEEEecCCCCCCCHHHHHhhCCCCEEEECCCCC
Confidence            22333333        246999998874444457899999988888776544

>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*

Probab=95.00  E-value=0.093  Score=45.18  Aligned_cols=96  Identities=17%  Similarity=0.214  Sum_probs=65.3

Q ss_pred             CCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHH----cCCC---eEEecCCCcccHHHHHHHHHHH
Q 017916          178 NIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKE----LGAD---NIVKVSTNLQDIAEEVEKIQKA  250 (364)
Q Consensus       178 ~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~----lg~~---~~~~~~~~~~~~~~~i~~~~~~  250 (364)
                      .++++.+||-.|+|. |..+..+++. +...+++++.++...+.+++    .|..   .++.-+.  .++.        .
T Consensus        43 ~~~~~~~vLDiGcG~-G~~~~~la~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~--~~~~--------~  110 (267)
T 3kkz_A           43 NLTEKSLIADIGCGT-GGQTMVLAGH-VTGQVTGLDFLSGFIDIFNRNARQSGLQNRVTGIVGSM--DDLP--------F  110 (267)
T ss_dssp             CCCTTCEEEEETCTT-CHHHHHHHTT-CSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCT--TSCC--------C
T ss_pred             cCCCCCEEEEeCCCC-CHHHHHHHhc-cCCEEEEEeCCHHHHHHHHHHHHHcCCCcCcEEEEcCh--hhCC--------C
Confidence            478899999999865 7788888888 44489999999987776654    3432   1222111  1110        0


Q ss_pred             cCCCccEEEECC-----CCHHHHHHHHHhcccCCEEEEEc
Q 017916          251 MGTGIDVSFDCA-----GFNKTMSTALSATRAGGKVCLVG  285 (364)
Q Consensus       251 ~~~~~d~vid~~-----g~~~~~~~~~~~l~~~G~~v~~g  285 (364)
                      ..+.+|+|+...     +....+..+.+.|+|+|+++...
T Consensus       111 ~~~~fD~i~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~  150 (267)
T 3kkz_A          111 RNEELDLIWSEGAIYNIGFERGLNEWRKYLKKGGYLAVSE  150 (267)
T ss_dssp             CTTCEEEEEESSCGGGTCHHHHHHHHGGGEEEEEEEEEEE
T ss_pred             CCCCEEEEEEcCCceecCHHHHHHHHHHHcCCCCEEEEEE
Confidence            135799998632     33567888999999999998765

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D

Probab=94.98  E-value=0.054  Score=47.11  Aligned_cols=94  Identities=16%  Similarity=0.233  Sum_probs=56.7

Q ss_pred             EEEEEcC-CHHHHHHHHHHHHC--CCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcCCCccEEEE
Q 017916          184 NVLIMGA-GPIGLVTMLGARAF--GAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  260 (364)
Q Consensus       184 ~VLI~Ga-g~~G~~ai~la~~~--g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid  260 (364)
                      +|||+|+ |.+|...++.+...  |.+ |++++++.++...+...++.. +..+-.  + .+.+.+..    .++|+||.
T Consensus         2 ~ilVtGatG~iG~~l~~~L~~~~~g~~-V~~~~r~~~~~~~l~~~~~~~-~~~D~~--d-~~~l~~~~----~~~d~vi~   72 (287)
T 2jl1_A            2 SIAVTGATGQLGGLVIQHLLKKVPASQ-IIAIVRNVEKASTLADQGVEV-RHGDYN--Q-PESLQKAF----AGVSKLLF   72 (287)
T ss_dssp             CEEETTTTSHHHHHHHHHHTTTSCGGG-EEEEESCTTTTHHHHHTTCEE-EECCTT--C-HHHHHHHT----TTCSEEEE
T ss_pred             eEEEEcCCchHHHHHHHHHHHhCCCCe-EEEEEcCHHHHhHHhhcCCeE-EEeccC--C-HHHHHHHH----hcCCEEEE
Confidence            6899998 99999999888777  884 666667666554444444432 222211  1 12333332    46999999


Q ss_pred             CCCCH-------HHHHHHHHhcccC--CEEEEEcC
Q 017916          261 CAGFN-------KTMSTALSATRAG--GKVCLVGM  286 (364)
Q Consensus       261 ~~g~~-------~~~~~~~~~l~~~--G~~v~~g~  286 (364)
                      +++..       .....+++.+...  ++++.++.
T Consensus        73 ~a~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~Ss  107 (287)
T 2jl1_A           73 ISGPHYDNTLLIVQHANVVKAARDAGVKHIAYTGY  107 (287)
T ss_dssp             CCCCCSCHHHHHHHHHHHHHHHHHTTCSEEEEEEE
T ss_pred             cCCCCcCchHHHHHHHHHHHHHHHcCCCEEEEECC
Confidence            98731       2233455555443  47887763

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}

Probab=94.97  E-value=0.041  Score=47.46  Aligned_cols=78  Identities=19%  Similarity=0.100  Sum_probs=48.2

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCC-CcccHHHHHHHHHHHcCCCccEE
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVST-NLQDIAEEVEKIQKAMGTGIDVS  258 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~-~~~~~~~~i~~~~~~~~~~~d~v  258 (364)
                      .+.++||+|+ |.+|.+.+..+...|+ .|+.++++.++...   ..+ ..+..|- ..+++.+.+++..+.. +++|++
T Consensus        27 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~---~~~-~~~~~Dv~d~~~v~~~~~~~~~~~-g~iD~l  100 (260)
T 3un1_A           27 QQKVVVITGASQGIGAGLVRAYRDRNY-RVVATSRSIKPSAD---PDI-HTVAGDISKPETADRIVREGIERF-GRIDSL  100 (260)
T ss_dssp             TCCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESSCCCCSS---TTE-EEEESCTTSHHHHHHHHHHHHHHH-SCCCEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCChhhccc---Cce-EEEEccCCCHHHHHHHHHHHHHHC-CCCCEE
Confidence            4679999998 9999999999999999 56777665543211   111 1222221 2233333444443332 479999


Q ss_pred             EECCCC
Q 017916          259 FDCAGF  264 (364)
Q Consensus       259 id~~g~  264 (364)
                      |+++|.
T Consensus       101 v~nAg~  106 (260)
T 3un1_A          101 VNNAGV  106 (260)
T ss_dssp             EECCCC
T ss_pred             EECCCC
Confidence            999873

>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*

Probab=94.96  E-value=0.097  Score=44.64  Aligned_cols=97  Identities=15%  Similarity=0.233  Sum_probs=67.7

Q ss_pred             cCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHH----cCCCe---EEecCCCcccHHHHHHHHHH
Q 017916          177 ANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKE----LGADN---IVKVSTNLQDIAEEVEKIQK  249 (364)
Q Consensus       177 ~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~----lg~~~---~~~~~~~~~~~~~~i~~~~~  249 (364)
                      ..++++++||-.|+|. |..+..+++..+. .+++++.+++..+.+++    .|...   ++.-+.  .++.        
T Consensus        42 ~~~~~~~~vLDiG~G~-G~~~~~l~~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~--~~~~--------  109 (257)
T 3f4k_A           42 NELTDDAKIADIGCGT-GGQTLFLADYVKG-QITGIDLFPDFIEIFNENAVKANCADRVKGITGSM--DNLP--------  109 (257)
T ss_dssp             CCCCTTCEEEEETCTT-SHHHHHHHHHCCS-EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCT--TSCS--------
T ss_pred             hcCCCCCeEEEeCCCC-CHHHHHHHHhCCC-eEEEEECCHHHHHHHHHHHHHcCCCCceEEEECCh--hhCC--------
Confidence            4678899999999865 7888899998876 89999999987776654    34321   222111  1110        


Q ss_pred             HcCCCccEEEEC-----CCCHHHHHHHHHhcccCCEEEEEc
Q 017916          250 AMGTGIDVSFDC-----AGFNKTMSTALSATRAGGKVCLVG  285 (364)
Q Consensus       250 ~~~~~~d~vid~-----~g~~~~~~~~~~~l~~~G~~v~~g  285 (364)
                      ...+.+|+|+..     ......+..+.+.|+|+|+++...
T Consensus       110 ~~~~~fD~v~~~~~l~~~~~~~~l~~~~~~L~pgG~l~~~~  150 (257)
T 3f4k_A          110 FQNEELDLIWSEGAIYNIGFERGMNEWSKYLKKGGFIAVSE  150 (257)
T ss_dssp             SCTTCEEEEEEESCSCCCCHHHHHHHHHTTEEEEEEEEEEE
T ss_pred             CCCCCEEEEEecChHhhcCHHHHHHHHHHHcCCCcEEEEEE
Confidence            013579999753     233567888999999999998875

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}

Probab=94.95  E-value=0.069  Score=46.37  Aligned_cols=78  Identities=17%  Similarity=0.168  Sum_probs=48.6

Q ss_pred             CEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHH-HHcCC--C-eEEecCCCcccHHHHHHHHHHHc---CCC
Q 017916          183 TNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KELGA--D-NIVKVSTNLQDIAEEVEKIQKAM---GTG  254 (364)
Q Consensus       183 ~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~-~~lg~--~-~~~~~~~~~~~~~~~i~~~~~~~---~~~  254 (364)
                      .++||+|+ |++|.+.++.+...|+ .|+.++++.++.+.+ +++..  . ..+..|-.+   .+.++++....   -++
T Consensus        22 k~vlVTGas~gIG~aia~~La~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d---~~~v~~~~~~~~~~~g~   97 (272)
T 2nwq_A           22 STLFITGATSGFGEACARRFAEAGW-SLVLTGRREERLQALAGELSAKTRVLPLTLDVRD---RAAMSAAVDNLPEEFAT   97 (272)
T ss_dssp             CEEEESSTTTSSHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHTTTSCEEEEECCTTC---HHHHHHHHHTCCGGGSS
T ss_pred             cEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhhcCCcEEEEEcCCCC---HHHHHHHHHHHHHHhCC
Confidence            68999998 9999999999999999 577777777665443 34432  1 122222211   12233332211   246


Q ss_pred             ccEEEECCCC
Q 017916          255 IDVSFDCAGF  264 (364)
Q Consensus       255 ~d~vid~~g~  264 (364)
                      +|++|+++|.
T Consensus        98 iD~lvnnAG~  107 (272)
T 2nwq_A           98 LRGLINNAGL  107 (272)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            8999998873

>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}

Probab=94.95  E-value=0.1  Score=47.12  Aligned_cols=131  Identities=11%  Similarity=0.031  Sum_probs=80.7

Q ss_pred             CEEEEEcCCHHHHHHHHHHHHC-CCCEEEEEecChhHHH-HHHHcCCCeEEecCCCcccHHHHHHHHHHHcCCCccEEEE
Q 017916          183 TNVLIMGAGPIGLVTMLGARAF-GAPRIVIVDVDDYRLS-VAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  260 (364)
Q Consensus       183 ~~VLI~Gag~~G~~ai~la~~~-g~~~vv~~~~~~~~~~-~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid  260 (364)
                      -+|.|.|.|.+|...+...+.. +++.+.+.+.+.++.+ +.+++|+..   |    .++.    ++..  ...+|+|+.
T Consensus         6 ~~vgiiG~G~~g~~~~~~l~~~~~~~lvav~d~~~~~~~~~~~~~g~~~---~----~~~~----~~l~--~~~~D~V~i   72 (354)
T 3db2_A            6 VGVAAIGLGRWAYVMADAYTKSEKLKLVTCYSRTEDKREKFGKRYNCAG---D----ATME----ALLA--REDVEMVII   72 (354)
T ss_dssp             EEEEEECCSHHHHHHHHHHTTCSSEEEEEEECSSHHHHHHHHHHHTCCC---C----SSHH----HHHH--CSSCCEEEE
T ss_pred             ceEEEEccCHHHHHHHHHHHhCCCcEEEEEECCCHHHHHHHHHHcCCCC---c----CCHH----HHhc--CCCCCEEEE
Confidence            4789999999998777766665 6755556677777655 446677653   2    2222    2322  357999999


Q ss_pred             CCCCHHHHHHHHHhcccCCEEEEEcCCCCCccccchh----hhhcCcEEEe--eccCCCcHHHHHHHHHcCCC
Q 017916          261 CAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTP----AAVREVDVVG--VFRYKNTWPLCLELLRSGKI  327 (364)
Q Consensus       261 ~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~----~~~~~~~~~~--~~~~~~~~~~~~~~l~~g~~  327 (364)
                      |+....+...+..+|..+ +-+++.-+.....-....    .-.+++.+.-  ...+...++.+.+++++|.+
T Consensus        73 ~tp~~~h~~~~~~al~~g-k~vl~EKP~~~~~~~~~~l~~~a~~~~~~~~v~~~~R~~p~~~~~k~~i~~g~i  144 (354)
T 3db2_A           73 TVPNDKHAEVIEQCARSG-KHIYVEKPISVSLDHAQRIDQVIKETGVKFLCGHSSRRLGALRKMKEMIDTKEI  144 (354)
T ss_dssp             CSCTTSHHHHHHHHHHTT-CEEEEESSSCSSHHHHHHHHHHHHHHCCCEEEECGGGGSHHHHHHHHHHHTTTT
T ss_pred             eCChHHHHHHHHHHHHcC-CEEEEccCCCCCHHHHHHHHHHHHHcCCeEEEeechhcCHHHHHHHHHHhcCCC
Confidence            999877888888888865 445554222111111111    1122333222  23346778889999999887

>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A

Probab=94.95  E-value=0.064  Score=48.42  Aligned_cols=90  Identities=19%  Similarity=0.262  Sum_probs=65.2

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcCCCccEEEE
Q 017916          181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  260 (364)
Q Consensus       181 ~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid  260 (364)
                      .|.+|.|.|.|.+|...++.++.+|+ .|++.+++..+.+..+++|+..+       .++    .++.    ...|+|+-
T Consensus       163 ~gktvGIIG~G~IG~~vA~~l~~~G~-~V~~~dr~~~~~~~~~~~g~~~~-------~~l----~ell----~~aDvV~l  226 (351)
T 3jtm_A          163 EGKTIGTVGAGRIGKLLLQRLKPFGC-NLLYHDRLQMAPELEKETGAKFV-------EDL----NEML----PKCDVIVI  226 (351)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHGGGCC-EEEEECSSCCCHHHHHHHCCEEC-------SCH----HHHG----GGCSEEEE
T ss_pred             cCCEEeEEEeCHHHHHHHHHHHHCCC-EEEEeCCCccCHHHHHhCCCeEc-------CCH----HHHH----hcCCEEEE
Confidence            57899999999999999999999999 58888877666666777776431       122    2221    35799988


Q ss_pred             CCCCH-H---HH-HHHHHhcccCCEEEEEcC
Q 017916          261 CAGFN-K---TM-STALSATRAGGKVCLVGM  286 (364)
Q Consensus       261 ~~g~~-~---~~-~~~~~~l~~~G~~v~~g~  286 (364)
                      ++... +   .+ ...+..|+++..++.++.
T Consensus       227 ~~Plt~~t~~li~~~~l~~mk~gailIN~aR  257 (351)
T 3jtm_A          227 NMPLTEKTRGMFNKELIGKLKKGVLIVNNAR  257 (351)
T ss_dssp             CSCCCTTTTTCBSHHHHHHSCTTEEEEECSC
T ss_pred             CCCCCHHHHHhhcHHHHhcCCCCCEEEECcC
Confidence            76521 1   11 456788999998888864

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*

Probab=94.91  E-value=0.048  Score=46.32  Aligned_cols=78  Identities=24%  Similarity=0.350  Sum_probs=47.5

Q ss_pred             CCCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCC-CcccHHHHHHHHHHHcC-CCcc
Q 017916          180 GPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVST-NLQDIAEEVEKIQKAMG-TGID  256 (364)
Q Consensus       180 ~~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~-~~~~~~~~i~~~~~~~~-~~~d  256 (364)
                      ..+.++||+|+ |.+|.+.++.+...|+ .|+.++++.++.+     +....+..+- ..+++.+.++.+.+..+ +++|
T Consensus         5 ~~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~-----~~~~~~~~D~~~~~~v~~~~~~~~~~~~~g~iD   78 (241)
T 1dhr_A            5 GEARRVLVYGGRGALGSRCVQAFRARNW-WVASIDVVENEEA-----SASVIVKMTDSFTEQADQVTAEVGKLLGDQKVD   78 (241)
T ss_dssp             -CCCEEEEETTTSHHHHHHHHHHHTTTC-EEEEEESSCCTTS-----SEEEECCCCSCHHHHHHHHHHHHHHHHTTCCEE
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCC-EEEEEeCChhhcc-----CCcEEEEcCCCCHHHHHHHHHHHHHHhCCCCCC
Confidence            45678999998 9999999999998999 5677766654421     1011111111 11233333333333332 5799


Q ss_pred             EEEECCC
Q 017916          257 VSFDCAG  263 (364)
Q Consensus       257 ~vid~~g  263 (364)
                      ++|+++|
T Consensus        79 ~lv~~Ag   85 (241)
T 1dhr_A           79 AILCVAG   85 (241)
T ss_dssp             EEEECCC
T ss_pred             EEEEccc
Confidence            9999987

>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*

Probab=94.91  E-value=0.2  Score=45.21  Aligned_cols=131  Identities=14%  Similarity=0.084  Sum_probs=79.8

Q ss_pred             CEEEEEcCCHHHHHHHHHHHHC--CCCEEEEEecChhHHH-HHHHcCCCeEEecCCCcccHHHHHHHHHHHcCCCccEEE
Q 017916          183 TNVLIMGAGPIGLVTMLGARAF--GAPRIVIVDVDDYRLS-VAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF  259 (364)
Q Consensus       183 ~~VLI~Gag~~G~~ai~la~~~--g~~~vv~~~~~~~~~~-~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vi  259 (364)
                      -+|.|.|.|.+|...+...+..  +++.+.+.+.++++.+ +.+++|+ ..  |    .++.+.+.      ...+|+|+
T Consensus        14 ~rvgiiG~G~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~~~~~~~-~~--~----~~~~~ll~------~~~~D~V~   80 (354)
T 3q2i_A           14 IRFALVGCGRIANNHFGALEKHADRAELIDVCDIDPAALKAAVERTGA-RG--H----ASLTDMLA------QTDADIVI   80 (354)
T ss_dssp             EEEEEECCSTTHHHHHHHHHHTTTTEEEEEEECSSHHHHHHHHHHHCC-EE--E----SCHHHHHH------HCCCSEEE
T ss_pred             ceEEEEcCcHHHHHHHHHHHhCCCCeEEEEEEcCCHHHHHHHHHHcCC-ce--e----CCHHHHhc------CCCCCEEE
Confidence            4789999998888777666655  6755557777777755 4566786 22  2    13332221      24799999


Q ss_pred             ECCCCHHHHHHHHHhcccCCEEEEEcCCCCCccccch---h-hhhcCcEEE-ee-ccCCCcHHHHHHHHHcCCC
Q 017916          260 DCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLT---P-AAVREVDVV-GV-FRYKNTWPLCLELLRSGKI  327 (364)
Q Consensus       260 d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~---~-~~~~~~~~~-~~-~~~~~~~~~~~~~l~~g~~  327 (364)
                      .|+....+...+..+|..+ +-+.+.-+.....-...   . .-.+++.+. +. ..+...+..+.+++++|.+
T Consensus        81 i~tp~~~h~~~~~~al~~g-k~v~~EKP~a~~~~~~~~l~~~a~~~g~~~~v~~~~r~~p~~~~~k~~i~~g~i  153 (354)
T 3q2i_A           81 LTTPSGLHPTQSIECSEAG-FHVMTEKPMATRWEDGLEMVKAADKAKKHLFVVKQNRRNATLQLLKRAMQEKRF  153 (354)
T ss_dssp             ECSCGGGHHHHHHHHHHTT-CEEEECSSSCSSHHHHHHHHHHHHHHTCCEEECCGGGGSHHHHHHHHHHHTTTT
T ss_pred             ECCCcHHHHHHHHHHHHCC-CCEEEeCCCcCCHHHHHHHHHHHHHhCCeEEEEEcccCCHHHHHHHHHHhcCCC
Confidence            9999777877888888765 55556432211111111   1 122333332 22 2335678889999999887

>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}

Probab=94.88  E-value=0.1  Score=46.86  Aligned_cols=131  Identities=17%  Similarity=0.077  Sum_probs=78.9

Q ss_pred             CEEEEEcCCHHHHHHHHHHHHC-CCCEEEEEecChhHHHH-HHHcCCCeEEecCCCcccHHHHHHHHHHHcCCCccEEEE
Q 017916          183 TNVLIMGAGPIGLVTMLGARAF-GAPRIVIVDVDDYRLSV-AKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  260 (364)
Q Consensus       183 ~~VLI~Gag~~G~~ai~la~~~-g~~~vv~~~~~~~~~~~-~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid  260 (364)
                      -+|.|.|+|.+|...+..++.. +++.+.+.+.+.++.+. .+++|+. .  +.    +    +.++..  ...+|+|+.
T Consensus         5 ~rvgiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~g~~-~--~~----~----~~~~l~--~~~~D~V~i   71 (344)
T 3euw_A            5 LRIALFGAGRIGHVHAANIAANPDLELVVIADPFIEGAQRLAEANGAE-A--VA----S----PDEVFA--RDDIDGIVI   71 (344)
T ss_dssp             EEEEEECCSHHHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHTTTCE-E--ES----S----HHHHTT--CSCCCEEEE
T ss_pred             eEEEEECCcHHHHHHHHHHHhCCCcEEEEEECCCHHHHHHHHHHcCCc-e--eC----C----HHHHhc--CCCCCEEEE
Confidence            3788999999998877776665 66555567777777554 5567742 2  21    2    222221  347999999


Q ss_pred             CCCCHHHHHHHHHhcccCCEEEEEcCCCCCcccc---chh-hhhcCcEEEee--ccCCCcHHHHHHHHHcCCC
Q 017916          261 CAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVP---LTP-AAVREVDVVGV--FRYKNTWPLCLELLRSGKI  327 (364)
Q Consensus       261 ~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~---~~~-~~~~~~~~~~~--~~~~~~~~~~~~~l~~g~~  327 (364)
                      |+....+...+..++..+ +-+.+.-+.......   +.. .-.+++.+.-.  ..+...+..+.+++++|.+
T Consensus        72 ~tp~~~h~~~~~~al~~g-k~v~~EKP~~~~~~~~~~l~~~a~~~g~~~~v~~~~r~~p~~~~~k~~i~~g~i  143 (344)
T 3euw_A           72 GSPTSTHVDLITRAVERG-IPALCEKPIDLDIEMVRACKEKIGDGASKVMLGFNRRFDPSFAAINARVANQEI  143 (344)
T ss_dssp             CSCGGGHHHHHHHHHHTT-CCEEECSCSCSCHHHHHHHHHHHGGGGGGEEECCGGGGCHHHHHHHHHHHTTTT
T ss_pred             eCCchhhHHHHHHHHHcC-CcEEEECCCCCCHHHHHHHHHHHHhcCCeEEecchhhcCHHHHHHHHHHhcCCC
Confidence            999888888888888765 445554322111111   111 11223322222  2336678889999999887

>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4

Probab=94.88  E-value=0.19  Score=40.49  Aligned_cols=101  Identities=18%  Similarity=0.276  Sum_probs=65.4

Q ss_pred             HHHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHc----CCCe--EEecCCCcccHHHHHHHH
Q 017916          174 CRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKEL----GADN--IVKVSTNLQDIAEEVEKI  247 (364)
Q Consensus       174 l~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~l----g~~~--~~~~~~~~~~~~~~i~~~  247 (364)
                      ++....+++++||-.|+|. |..+..+++. +. .+++++.+++..+.+++.    +...  +.....   ++.+..   
T Consensus        45 ~~~~~~~~~~~vLdiG~G~-G~~~~~~~~~-~~-~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~---d~~~~~---  115 (194)
T 1dus_A           45 VENVVVDKDDDILDLGCGY-GVIGIALADE-VK-STTMADINRRAIKLAKENIKLNNLDNYDIRVVHS---DLYENV---  115 (194)
T ss_dssp             HHHCCCCTTCEEEEETCTT-SHHHHHHGGG-SS-EEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEEC---STTTTC---
T ss_pred             HHHcccCCCCeEEEeCCCC-CHHHHHHHHc-CC-eEEEEECCHHHHHHHHHHHHHcCCCccceEEEEC---chhccc---
Confidence            4566777899999998754 6667777777 65 799999998887776542    4331  111111   111100   


Q ss_pred             HHHcCCCccEEEECCCC-------HHHHHHHHHhcccCCEEEEEcC
Q 017916          248 QKAMGTGIDVSFDCAGF-------NKTMSTALSATRAGGKVCLVGM  286 (364)
Q Consensus       248 ~~~~~~~~d~vid~~g~-------~~~~~~~~~~l~~~G~~v~~g~  286 (364)
                         ....+|+|+....-       ...+..+.+.|+++|.++....
T Consensus       116 ---~~~~~D~v~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~  158 (194)
T 1dus_A          116 ---KDRKYNKIITNPPIRAGKEVLHRIIEEGKELLKDNGEIWVVIQ  158 (194)
T ss_dssp             ---TTSCEEEEEECCCSTTCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             ---ccCCceEEEECCCcccchhHHHHHHHHHHHHcCCCCEEEEEEC
Confidence               13579999864320       2566778889999999987743

>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}

Probab=94.87  E-value=0.058  Score=47.37  Aligned_cols=44  Identities=27%  Similarity=0.368  Sum_probs=36.4

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHH
Q 017916          180 GPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKE  224 (364)
Q Consensus       180 ~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~  224 (364)
                      .++.+||-.|+|. |..++.+++.++...|++++.++.-.+.+++
T Consensus        45 ~~~~~VLDiGCG~-G~~~~~la~~~~~~~v~gvDis~~~i~~A~~   88 (292)
T 3g07_A           45 FRGRDVLDLGCNV-GHLTLSIACKWGPSRMVGLDIDSRLIHSARQ   88 (292)
T ss_dssp             TTTSEEEEESCTT-CHHHHHHHHHTCCSEEEEEESCHHHHHHHHH
T ss_pred             cCCCcEEEeCCCC-CHHHHHHHHHcCCCEEEEECCCHHHHHHHHH
Confidence            3678999998765 7788899999876689999999987777765

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*

Probab=94.87  E-value=0.047  Score=47.46  Aligned_cols=94  Identities=14%  Similarity=0.185  Sum_probs=55.0

Q ss_pred             EEEEEcC-CHHHHHHHHHHHHC--CCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcCCCccEEEE
Q 017916          184 NVLIMGA-GPIGLVTMLGARAF--GAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  260 (364)
Q Consensus       184 ~VLI~Ga-g~~G~~ai~la~~~--g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid  260 (364)
                      +|||+|+ |.+|...++.+...  |.+ |+++++++++...+...++.. +..+-.  + .+.+.+.    -.++|+||.
T Consensus         1 ~ilVtGatG~iG~~l~~~L~~~~~g~~-V~~~~r~~~~~~~~~~~~~~~-~~~D~~--d-~~~~~~~----~~~~d~vi~   71 (286)
T 2zcu_A            1 MIAITGATGQLGHYVIESLMKTVPASQ-IVAIVRNPAKAQALAAQGITV-RQADYG--D-EAALTSA----LQGVEKLLL   71 (286)
T ss_dssp             CEEEESTTSHHHHHHHHHHTTTSCGGG-EEEEESCTTTCHHHHHTTCEE-EECCTT--C-HHHHHHH----TTTCSEEEE
T ss_pred             CEEEEcCCchHHHHHHHHHHhhCCCce-EEEEEcChHhhhhhhcCCCeE-EEcCCC--C-HHHHHHH----HhCCCEEEE
Confidence            4899998 99999999888777  884 666667666554444444432 222211  1 1223333    246899999


Q ss_pred             CCCCH-----HHHHHHHHhccc-C-CEEEEEcC
Q 017916          261 CAGFN-----KTMSTALSATRA-G-GKVCLVGM  286 (364)
Q Consensus       261 ~~g~~-----~~~~~~~~~l~~-~-G~~v~~g~  286 (364)
                      +++..     .....+++.+.. + ++++.++.
T Consensus        72 ~a~~~~~~~~~~~~~l~~a~~~~~~~~~v~~Ss  104 (286)
T 2zcu_A           72 ISSSEVGQRAPQHRNVINAAKAAGVKFIAYTSL  104 (286)
T ss_dssp             CC--------CHHHHHHHHHHHHTCCEEEEEEE
T ss_pred             eCCCCchHHHHHHHHHHHHHHHcCCCEEEEECC
Confidence            98742     123344554443 2 57887763

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2

Probab=94.85  E-value=0.13  Score=45.20  Aligned_cols=93  Identities=18%  Similarity=0.263  Sum_probs=55.2

Q ss_pred             CCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecC-----hhHHHHHHHc---CCCeEEecCCCcccHHHHHHHHHHHcC
Q 017916          182 ETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVD-----DYRLSVAKEL---GADNIVKVSTNLQDIAEEVEKIQKAMG  252 (364)
Q Consensus       182 g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~-----~~~~~~~~~l---g~~~~~~~~~~~~~~~~~i~~~~~~~~  252 (364)
                      ..+|||+|+ |.+|...++.+...|.+ |++++++     +++.+.++.+   ++. ++..+-  .+ .+.+.+..    
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~-V~~~~R~~~~~~~~~~~~~~~~~~~~~~-~~~~D~--~d-~~~l~~~~----   74 (313)
T 1qyd_A            4 KSRVLIVGGTGYIGKRIVNASISLGHP-TYVLFRPEVVSNIDKVQMLLYFKQLGAK-LIEASL--DD-HQRLVDAL----   74 (313)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCC-EEEECCSCCSSCHHHHHHHHHHHTTTCE-EECCCS--SC-HHHHHHHH----
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCCc-EEEEECCCcccchhHHHHHHHHHhCCeE-EEeCCC--CC-HHHHHHHH----
Confidence            357999998 99999999998888985 5666665     3444443332   433 222221  12 22343332    


Q ss_pred             CCccEEEECCCCH------HHHHHHHHhcccCC---EEEE
Q 017916          253 TGIDVSFDCAGFN------KTMSTALSATRAGG---KVCL  283 (364)
Q Consensus       253 ~~~d~vid~~g~~------~~~~~~~~~l~~~G---~~v~  283 (364)
                      .++|+||.+++..      .....+++.+...|   +++.
T Consensus        75 ~~~d~vi~~a~~~~~~~~~~~~~~l~~aa~~~g~v~~~v~  114 (313)
T 1qyd_A           75 KQVDVVISALAGGVLSHHILEQLKLVEAIKEAGNIKRFLP  114 (313)
T ss_dssp             TTCSEEEECCCCSSSSTTTTTHHHHHHHHHHSCCCSEEEC
T ss_pred             hCCCEEEECCccccchhhHHHHHHHHHHHHhcCCCceEEe
Confidence            3699999988742      22344555554443   6763

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=94.83  E-value=0.04  Score=46.61  Aligned_cols=99  Identities=19%  Similarity=0.296  Sum_probs=59.1

Q ss_pred             CCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCC-cccHHHHHHHHHHHcC-CCccEE
Q 017916          182 ETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTN-LQDIAEEVEKIQKAMG-TGIDVS  258 (364)
Q Consensus       182 g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~-~~~~~~~i~~~~~~~~-~~~d~v  258 (364)
                      +.++||+|+ |.+|.+.++.+...|+ .|+.++++.++.+     +....+..+-. .+++.+.++...+..+ +++|++
T Consensus         3 ~k~vlITGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~-----~~~~~~~~D~~~~~~~~~~~~~~~~~~~~g~id~l   76 (236)
T 1ooe_A            3 SGKVIVYGGKGALGSAILEFFKKNGY-TVLNIDLSANDQA-----DSNILVDGNKNWTEQEQSILEQTASSLQGSQVDGV   76 (236)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTE-EEEEEESSCCTTS-----SEEEECCTTSCHHHHHHHHHHHHHHHHTTCCEEEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEecCccccc-----cccEEEeCCCCCHHHHHHHHHHHHHHhCCCCCCEE
Confidence            568999998 9999999999999999 5677766654421     10111111111 1222233333333222 579999


Q ss_pred             EECCCC--------H---H---------------HHHHHHHhcccCCEEEEEcC
Q 017916          259 FDCAGF--------N---K---------------TMSTALSATRAGGKVCLVGM  286 (364)
Q Consensus       259 id~~g~--------~---~---------------~~~~~~~~l~~~G~~v~~g~  286 (364)
                      |+++|.        .   +               ..+.++..++++|+++.++.
T Consensus        77 v~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS  130 (236)
T 1ooe_A           77 FCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGA  130 (236)
T ss_dssp             EECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECC
T ss_pred             EECCcccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEECc
Confidence            999882        1   1               12344556656789988863

>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae}

Probab=94.82  E-value=0.21  Score=47.60  Aligned_cols=81  Identities=22%  Similarity=0.297  Sum_probs=51.6

Q ss_pred             CCCCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhH----HHH---HHHcCCCe-EEecCCCcccHHHHHHHHHH
Q 017916          179 IGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYR----LSV---AKELGADN-IVKVSTNLQDIAEEVEKIQK  249 (364)
Q Consensus       179 ~~~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~----~~~---~~~lg~~~-~~~~~~~~~~~~~~i~~~~~  249 (364)
                      ++++.+|||+|+ |.+|...+..+...|+++++.+.++...    .++   ++..|... ++..+-.  + .+.++++..
T Consensus       256 ~~~~~~vLITGgtGgIG~~lA~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvt--d-~~~v~~~~~  332 (511)
T 2z5l_A          256 WQPSGTVLITGGMGAIGRRLARRLAAEGAERLVLTSRRGPEAPGAAELAEELRGHGCEVVHAACDVA--E-RDALAALVT  332 (511)
T ss_dssp             CCCCSEEEEETTTSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHTTTCEEEEEECCSS--C-HHHHHHHHH
T ss_pred             cCCCCEEEEECCCCHHHHHHHHHHHhCCCcEEEEEecCCcccHHHHHHHHHHHhcCCEEEEEEeCCC--C-HHHHHHHHh
Confidence            467889999998 9999999988888899767777666421    222   33345432 2222221  2 223444433


Q ss_pred             HcCCCccEEEECCCC
Q 017916          250 AMGTGIDVSFDCAGF  264 (364)
Q Consensus       250 ~~~~~~d~vid~~g~  264 (364)
                      .  .++|+||.++|.
T Consensus       333 ~--~~ld~VVh~AGv  345 (511)
T 2z5l_A          333 A--YPPNAVFHTAGI  345 (511)
T ss_dssp             H--SCCSEEEECCCC
T ss_pred             c--CCCcEEEECCcc
Confidence            2  579999999873

>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A

Probab=94.82  E-value=0.17  Score=43.31  Aligned_cols=33  Identities=30%  Similarity=0.482  Sum_probs=29.1

Q ss_pred             CCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEec
Q 017916          182 ETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDV  214 (364)
Q Consensus       182 g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~  214 (364)
                      +.+|+|.|+|++|..++..+.+.|...+..++.
T Consensus        28 ~~~VlvvG~GglG~~va~~La~~Gvg~i~lvD~   60 (251)
T 1zud_1           28 DSQVLIIGLGGLGTPAALYLAGAGVGTLVLADD   60 (251)
T ss_dssp             TCEEEEECCSTTHHHHHHHHHHTTCSEEEEECC
T ss_pred             cCcEEEEccCHHHHHHHHHHHHcCCCeEEEEeC
Confidence            469999999999999999999999988888754

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}

Probab=94.81  E-value=0.079  Score=45.98  Aligned_cols=81  Identities=21%  Similarity=0.225  Sum_probs=49.1

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHH----HHHcCCC-eEEecCCC-cccHHHHHHHHHHHcCC
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSV----AKELGAD-NIVKVSTN-LQDIAEEVEKIQKAMGT  253 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~----~~~lg~~-~~~~~~~~-~~~~~~~i~~~~~~~~~  253 (364)
                      .+.++||+|+ |.+|.+.+..+...|+ .|+.++++.++.+.    ++..+.. ..+..+-. .+++.+.++.+.... +
T Consensus        33 ~~k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-g  110 (279)
T 3ctm_A           33 KGKVASVTGSSGGIGWAVAEAYAQAGA-DVAIWYNSHPADEKAEHLQKTYGVHSKAYKCNISDPKSVEETISQQEKDF-G  110 (279)
T ss_dssp             TTCEEEETTTTSSHHHHHHHHHHHHTC-EEEEEESSSCCHHHHHHHHHHHCSCEEEEECCTTCHHHHHHHHHHHHHHH-S
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcceEEEeecCCHHHHHHHHHHHHHHh-C
Confidence            4679999998 9999999988888899 56666666544332    2233432 12222222 233334444433322 4


Q ss_pred             CccEEEECCC
Q 017916          254 GIDVSFDCAG  263 (364)
Q Consensus       254 ~~d~vid~~g  263 (364)
                      ++|++|+++|
T Consensus       111 ~id~li~~Ag  120 (279)
T 3ctm_A          111 TIDVFVANAG  120 (279)
T ss_dssp             CCSEEEECGG
T ss_pred             CCCEEEECCc
Confidence            6999999876

>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5

Probab=94.81  E-value=0.096  Score=45.46  Aligned_cols=94  Identities=14%  Similarity=0.153  Sum_probs=58.3

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHH-HHHHcCCCeEEecCCCcccHHHHHHHHHHHcCCCccEEE
Q 017916          181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLS-VAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF  259 (364)
Q Consensus       181 ~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~-~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vi  259 (364)
                      ++.+++|+|+|++|.++++.+...|+ .|+++.++.++.+ +.++++.....+..+. ++       +.  . +++|++|
T Consensus       118 ~~k~vlViGaGg~g~a~a~~L~~~G~-~V~v~~R~~~~~~~la~~~~~~~~~~~~~~-~~-------~~--~-~~~DivV  185 (271)
T 1nyt_A          118 PGLRILLIGAGGASRGVLLPLLSLDC-AVTITNRTVSRAEELAKLFAHTGSIQALSM-DE-------LE--G-HEFDLII  185 (271)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSHHHHHHHHHHTGGGSSEEECCS-GG-------GT--T-CCCSEEE
T ss_pred             CCCEEEEECCcHHHHHHHHHHHHcCC-EEEEEECCHHHHHHHHHHhhccCCeeEecH-HH-------hc--c-CCCCEEE
Confidence            57899999999999999999999996 7888888877754 5555553110111110 11       11  1 4799999


Q ss_pred             ECCCCHHHHH---HHHHhcccCCEEEEEcC
Q 017916          260 DCAGFNKTMS---TALSATRAGGKVCLVGM  286 (364)
Q Consensus       260 d~~g~~~~~~---~~~~~l~~~G~~v~~g~  286 (364)
                      ++++.+..-.   .....++++..++++..
T Consensus       186 n~t~~~~~~~~~~i~~~~l~~~~~v~D~~y  215 (271)
T 1nyt_A          186 NATSSGISGDIPAIPSSLIHPGIYCYDMFY  215 (271)
T ss_dssp             ECCSCGGGTCCCCCCGGGCCTTCEEEESCC
T ss_pred             ECCCCCCCCCCCCCCHHHcCCCCEEEEecc
Confidence            9998643200   01123455555555543

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}

Probab=94.79  E-value=0.016  Score=49.41  Aligned_cols=77  Identities=16%  Similarity=0.167  Sum_probs=44.9

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHH--HHHH--HcCCCc
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVE--KIQK--AMGTGI  255 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~--~~~~--~~~~~~  255 (364)
                      .+.++||+|+ |++|.+.++.+.. |+ .|+.++++.++.+.+.++.-...+..     |+.+...  ....  ..-+++
T Consensus         4 ~~k~vlITGas~gIG~~~a~~l~~-g~-~v~~~~r~~~~~~~~~~~~~~~~~~~-----D~~~~~~~~~~~~~~~~~~~i   76 (245)
T 3e9n_A            4 KKKIAVVTGATGGMGIEIVKDLSR-DH-IVYALGRNPEHLAALAEIEGVEPIES-----DIVKEVLEEGGVDKLKNLDHV   76 (245)
T ss_dssp             --CEEEEESTTSHHHHHHHHHHTT-TS-EEEEEESCHHHHHHHHTSTTEEEEEC-----CHHHHHHTSSSCGGGTTCSCC
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHhC-CC-eEEEEeCCHHHHHHHHhhcCCcceec-----ccchHHHHHHHHHHHHhcCCC
Confidence            3678999998 9999988887755 77 67778888877766655332222221     2222110  0000  012479


Q ss_pred             cEEEECCCC
Q 017916          256 DVSFDCAGF  264 (364)
Q Consensus       256 d~vid~~g~  264 (364)
                      |++|+++|.
T Consensus        77 d~lv~~Ag~   85 (245)
T 3e9n_A           77 DTLVHAAAV   85 (245)
T ss_dssp             SEEEECC--
T ss_pred             CEEEECCCc
Confidence            999999884

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*

Probab=94.78  E-value=0.05  Score=44.55  Aligned_cols=94  Identities=26%  Similarity=0.296  Sum_probs=56.5

Q ss_pred             CEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcCCCccEEEEC
Q 017916          183 TNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDC  261 (364)
Q Consensus       183 ~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid~  261 (364)
                      .+|||+|+ |.+|...++.+...|. .|+++++++++.+....-+. ..+..+-.  + .+.+.+..    .++|++|.+
T Consensus         4 ~~ilVtGatG~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~~~~~-~~~~~D~~--~-~~~~~~~~----~~~d~vi~~   74 (206)
T 1hdo_A            4 KKIAIFGATGQTGLTTLAQAVQAGY-EVTVLVRDSSRLPSEGPRPA-HVVVGDVL--Q-AADVDKTV----AGQDAVIVL   74 (206)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCGGGSCSSSCCCS-EEEESCTT--S-HHHHHHHH----TTCSEEEEC
T ss_pred             CEEEEEcCCcHHHHHHHHHHHHCCC-eEEEEEeChhhcccccCCce-EEEEecCC--C-HHHHHHHH----cCCCEEEEC
Confidence            68999998 9999999999988898 67777777655322111122 22222221  2 12333332    368999999


Q ss_pred             CCCHH----------HHHHHHHhccc--CCEEEEEc
Q 017916          262 AGFNK----------TMSTALSATRA--GGKVCLVG  285 (364)
Q Consensus       262 ~g~~~----------~~~~~~~~l~~--~G~~v~~g  285 (364)
                      +|...          ....+++.+..  -++++.++
T Consensus        75 a~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~v~~S  110 (206)
T 1hdo_A           75 LGTRNDLSPTTVMSEGARNIVAAMKAHGVDKVVACT  110 (206)
T ss_dssp             CCCTTCCSCCCHHHHHHHHHHHHHHHHTCCEEEEEC
T ss_pred             ccCCCCCCccchHHHHHHHHHHHHHHhCCCeEEEEe
Confidence            88421          23344444443  35888776

>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}

Probab=94.77  E-value=0.2  Score=42.25  Aligned_cols=96  Identities=18%  Similarity=0.144  Sum_probs=64.1

Q ss_pred             CCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcCCCccE
Q 017916          178 NIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDV  257 (364)
Q Consensus       178 ~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~  257 (364)
                      .++++.+||-.|+|. |..+..+++. |+ .+++++.+++..+.+++.  ...+.     .+..+...   ....+.+|+
T Consensus        38 ~~~~~~~vLDiGcG~-G~~~~~l~~~-~~-~v~gvD~s~~~~~~a~~~--~~~~~-----~d~~~~~~---~~~~~~fD~  104 (240)
T 3dli_A           38 YFKGCRRVLDIGCGR-GEFLELCKEE-GI-ESIGVDINEDMIKFCEGK--FNVVK-----SDAIEYLK---SLPDKYLDG  104 (240)
T ss_dssp             GTTTCSCEEEETCTT-THHHHHHHHH-TC-CEEEECSCHHHHHHHHTT--SEEEC-----SCHHHHHH---TSCTTCBSE
T ss_pred             hhcCCCeEEEEeCCC-CHHHHHHHhC-CC-cEEEEECCHHHHHHHHhh--cceee-----ccHHHHhh---hcCCCCeeE
Confidence            357889999998754 5556666665 77 589999999888888775  22222     22222111   112467999


Q ss_pred             EEECC-----CC---HHHHHHHHHhcccCCEEEEEcC
Q 017916          258 SFDCA-----GF---NKTMSTALSATRAGGKVCLVGM  286 (364)
Q Consensus       258 vid~~-----g~---~~~~~~~~~~l~~~G~~v~~g~  286 (364)
                      |+...     ..   ...+..+.+.|+|+|+++....
T Consensus       105 i~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~  141 (240)
T 3dli_A          105 VMISHFVEHLDPERLFELLSLCYSKMKYSSYIVIESP  141 (240)
T ss_dssp             EEEESCGGGSCGGGHHHHHHHHHHHBCTTCCEEEEEE
T ss_pred             EEECCchhhCCcHHHHHHHHHHHHHcCCCcEEEEEeC
Confidence            98632     21   3678889999999999987643

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}

Probab=94.76  E-value=0.11  Score=44.11  Aligned_cols=67  Identities=21%  Similarity=0.233  Sum_probs=42.4

Q ss_pred             EEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHH--HHHHHHHHHcCCCccEEEE
Q 017916          184 NVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIA--EEVEKIQKAMGTGIDVSFD  260 (364)
Q Consensus       184 ~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~--~~i~~~~~~~~~~~d~vid  260 (364)
                      +|||+|+ |.+|...+..+...|+ .|++++++.++.+      ..    +   ..|+.  +.++++.....+++|++|+
T Consensus         3 ~vlVtGasg~iG~~l~~~L~~~g~-~V~~~~r~~~~~~------~~----~---~~D~~~~~~~~~~~~~~~~~~d~vi~   68 (255)
T 2dkn_A            3 VIAITGSASGIGAALKELLARAGH-TVIGIDRGQADIE------AD----L---STPGGRETAVAAVLDRCGGVLDGLVC   68 (255)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSSSSEE------CC----T---TSHHHHHHHHHHHHHHHTTCCSEEEE
T ss_pred             EEEEeCCCcHHHHHHHHHHHhCCC-EEEEEeCChhHcc------cc----c---cCCcccHHHHHHHHHHcCCCccEEEE
Confidence            6899998 9999999998888998 5677766554321      00    1   01111  2233333222357999999


Q ss_pred             CCCC
Q 017916          261 CAGF  264 (364)
Q Consensus       261 ~~g~  264 (364)
                      ++|.
T Consensus        69 ~Ag~   72 (255)
T 2dkn_A           69 CAGV   72 (255)
T ss_dssp             CCCC
T ss_pred             CCCC
Confidence            8873

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*

Probab=94.75  E-value=0.16  Score=44.40  Aligned_cols=75  Identities=12%  Similarity=0.209  Sum_probs=49.1

Q ss_pred             CCCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHH-HHHc----CCCe-EEecCCCcccHHHHHHHHHHHcC
Q 017916          180 GPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSV-AKEL----GADN-IVKVSTNLQDIAEEVEKIQKAMG  252 (364)
Q Consensus       180 ~~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~-~~~l----g~~~-~~~~~~~~~~~~~~i~~~~~~~~  252 (364)
                      -+|.++||+|+ |++|.+++..+...|++ |++++++.++.+. .+++    ++.. ..+..+     .+.+++.    -
T Consensus       117 l~gk~vlVtGaaGGiG~aia~~L~~~G~~-V~i~~R~~~~~~~l~~~~~~~~~~~~~~~D~~~-----~~~~~~~----~  186 (287)
T 1lu9_A          117 VKGKKAVVLAGTGPVGMRSAALLAGEGAE-VVLCGRKLDKAQAAADSVNKRFKVNVTAAETAD-----DASRAEA----V  186 (287)
T ss_dssp             CTTCEEEEETCSSHHHHHHHHHHHHTTCE-EEEEESSHHHHHHHHHHHHHHHTCCCEEEECCS-----HHHHHHH----T
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCcCE-EEEEECCHHHHHHHHHHHHhcCCcEEEEecCCC-----HHHHHHH----H
Confidence            36789999995 99999999999999995 7777777766543 3333    3221 223211     1223333    2


Q ss_pred             CCccEEEECCCC
Q 017916          253 TGIDVSFDCAGF  264 (364)
Q Consensus       253 ~~~d~vid~~g~  264 (364)
                      ..+|++|+++|.
T Consensus       187 ~~~DvlVn~ag~  198 (287)
T 1lu9_A          187 KGAHFVFTAGAI  198 (287)
T ss_dssp             TTCSEEEECCCT
T ss_pred             HhCCEEEECCCc
Confidence            358999999973

>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}

Probab=94.75  E-value=0.12  Score=46.31  Aligned_cols=89  Identities=18%  Similarity=0.203  Sum_probs=64.3

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcCCCccEEEE
Q 017916          181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  260 (364)
Q Consensus       181 ~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid  260 (364)
                      .|.+|.|.|.|.+|...++.++.+|+ .|++.+++..+ +...++|+..    .    ++    .++.    ...|+|+.
T Consensus       164 ~g~tvgIIGlG~IG~~vA~~l~~~G~-~V~~~d~~~~~-~~~~~~g~~~----~----~l----~ell----~~aDvV~l  225 (335)
T 2g76_A          164 NGKTLGILGLGRIGREVATRMQSFGM-KTIGYDPIISP-EVSASFGVQQ----L----PL----EEIW----PLCDFITV  225 (335)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHTTTC-EEEEECSSSCH-HHHHHTTCEE----C----CH----HHHG----GGCSEEEE
T ss_pred             CcCEEEEEeECHHHHHHHHHHHHCCC-EEEEECCCcch-hhhhhcCcee----C----CH----HHHH----hcCCEEEE
Confidence            57899999999999999999999999 68888876655 3556677642    1    22    2221    36899998


Q ss_pred             CCCCHH----HH-HHHHHhcccCCEEEEEcCC
Q 017916          261 CAGFNK----TM-STALSATRAGGKVCLVGMG  287 (364)
Q Consensus       261 ~~g~~~----~~-~~~~~~l~~~G~~v~~g~~  287 (364)
                      ++...+    .+ ...+..|++++.++.++..
T Consensus       226 ~~P~t~~t~~li~~~~l~~mk~gailIN~arg  257 (335)
T 2g76_A          226 HTPLLPSTTGLLNDNTFAQCKKGVRVVNCARG  257 (335)
T ss_dssp             CCCCCTTTTTSBCHHHHTTSCTTEEEEECSCT
T ss_pred             ecCCCHHHHHhhCHHHHhhCCCCcEEEECCCc
Confidence            876432    12 3567889999999988753

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*

Probab=94.74  E-value=0.16  Score=43.47  Aligned_cols=82  Identities=11%  Similarity=0.131  Sum_probs=48.1

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHH---CCCCEEEEEecChhHHHHH-HHc-----CCC-eEEecCCC-cccHHHHHHHHH
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARA---FGAPRIVIVDVDDYRLSVA-KEL-----GAD-NIVKVSTN-LQDIAEEVEKIQ  248 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~---~g~~~vv~~~~~~~~~~~~-~~l-----g~~-~~~~~~~~-~~~~~~~i~~~~  248 (364)
                      .+.++||+|+ +++|.+.++.+..   .|+ .|+.++++.++.+.+ +++     +.. ..+..+-. .+++.+.++.+.
T Consensus         5 ~~k~~lVTGas~gIG~~ia~~l~~~~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   83 (259)
T 1oaa_A            5 GCAVCVLTGASRGFGRALAPQLARLLSPGS-VMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAVR   83 (259)
T ss_dssp             BSEEEEESSCSSHHHHHHHHHHHTTBCTTC-EEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCcEEEEeCCCChHHHHHHHHHHHhhcCCC-eEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEecCCCCHHHHHHHHHHHH
Confidence            3578899998 9999998888777   899 577777777654432 333     322 12222222 223333333332


Q ss_pred             HH-cCCCcc--EEEECCC
Q 017916          249 KA-MGTGID--VSFDCAG  263 (364)
Q Consensus       249 ~~-~~~~~d--~vid~~g  263 (364)
                      .. ..+++|  ++|+++|
T Consensus        84 ~~~~~g~~d~~~lvnnAg  101 (259)
T 1oaa_A           84 ELPRPEGLQRLLLINNAA  101 (259)
T ss_dssp             HSCCCTTCCEEEEEECCC
T ss_pred             hccccccCCccEEEECCc
Confidence            20 123678  9999876

>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}

Probab=94.73  E-value=0.25  Score=43.72  Aligned_cols=88  Identities=13%  Similarity=0.065  Sum_probs=59.7

Q ss_pred             CCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcCCCccEEEEC
Q 017916          182 ETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDC  261 (364)
Q Consensus       182 g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid~  261 (364)
                      -.+|.|.|.|.+|...++.+...|. .|.+.++++++.+.+.+.|+...       .+..+.+        ...|+||-|
T Consensus        21 m~~I~iIG~G~mG~~~A~~l~~~G~-~V~~~dr~~~~~~~l~~~g~~~~-------~~~~~~~--------~~aDvvi~~   84 (310)
T 3doj_A           21 MMEVGFLGLGIMGKAMSMNLLKNGF-KVTVWNRTLSKCDELVEHGASVC-------ESPAEVI--------KKCKYTIAM   84 (310)
T ss_dssp             SCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSGGGGHHHHHTTCEEC-------SSHHHHH--------HHCSEEEEC
T ss_pred             CCEEEEECccHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHCCCeEc-------CCHHHHH--------HhCCEEEEE
Confidence            3589999999999999998888998 68888999988888877775321       1222211        135788888


Q ss_pred             CCCHHHHHHHH-------HhcccCCEEEEEc
Q 017916          262 AGFNKTMSTAL-------SATRAGGKVCLVG  285 (364)
Q Consensus       262 ~g~~~~~~~~~-------~~l~~~G~~v~~g  285 (364)
                      +..+......+       ..++++..++..+
T Consensus        85 vp~~~~~~~v~~~~~~l~~~l~~g~~vv~~s  115 (310)
T 3doj_A           85 LSDPCAALSVVFDKGGVLEQICEGKGYIDMS  115 (310)
T ss_dssp             CSSHHHHHHHHHSTTCGGGGCCTTCEEEECS
T ss_pred             cCCHHHHHHHHhCchhhhhccCCCCEEEECC
Confidence            77554444444       3445555555554

>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}

Probab=94.73  E-value=0.11  Score=43.15  Aligned_cols=100  Identities=20%  Similarity=0.220  Sum_probs=66.1

Q ss_pred             CCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcCCCccE
Q 017916          178 NIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDV  257 (364)
Q Consensus       178 ~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~  257 (364)
                      ...++.+||-.|+|. |..+..+++. |. .+++++.+++..+.+++.+......     .++.+ +.......+..+|+
T Consensus        49 ~~~~~~~vLdiG~G~-G~~~~~l~~~-~~-~v~~vD~s~~~~~~a~~~~~~~~~~-----~~~~~-~~~~~~~~~~~fD~  119 (227)
T 3e8s_A           49 LGRQPERVLDLGCGE-GWLLRALADR-GI-EAVGVDGDRTLVDAARAAGAGEVHL-----ASYAQ-LAEAKVPVGKDYDL  119 (227)
T ss_dssp             HHTCCSEEEEETCTT-CHHHHHHHTT-TC-EEEEEESCHHHHHHHHHTCSSCEEE-----CCHHH-HHTTCSCCCCCEEE
T ss_pred             hcCCCCEEEEeCCCC-CHHHHHHHHC-CC-EEEEEcCCHHHHHHHHHhcccccch-----hhHHh-hcccccccCCCccE
Confidence            345678999998754 5666677766 77 7999999999988888764333332     12111 10000111345999


Q ss_pred             EEECCC-----CHHHHHHHHHhcccCCEEEEEcC
Q 017916          258 SFDCAG-----FNKTMSTALSATRAGGKVCLVGM  286 (364)
Q Consensus       258 vid~~g-----~~~~~~~~~~~l~~~G~~v~~g~  286 (364)
                      |+....     -...+..+.+.|+|+|+++....
T Consensus       120 v~~~~~l~~~~~~~~l~~~~~~L~pgG~l~~~~~  153 (227)
T 3e8s_A          120 ICANFALLHQDIIELLSAMRTLLVPGGALVIQTL  153 (227)
T ss_dssp             EEEESCCCSSCCHHHHHHHHHTEEEEEEEEEEEC
T ss_pred             EEECchhhhhhHHHHHHHHHHHhCCCeEEEEEec
Confidence            986432     24788899999999999998753

>2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A

Probab=94.72  E-value=0.062  Score=49.22  Aligned_cols=90  Identities=20%  Similarity=0.179  Sum_probs=62.8

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcCCCccEEEE
Q 017916          181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  260 (364)
Q Consensus       181 ~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid  260 (364)
                      .|.+|.|.|.|.+|...++.++.+|+ .|++.+++..+.+..+++|+...       .++    .++.    ...|+|+.
T Consensus       190 ~gktvGIIGlG~IG~~vA~~l~a~G~-~V~~~d~~~~~~~~~~~~G~~~~-------~~l----~ell----~~aDvV~l  253 (393)
T 2nac_A          190 EAMHVGTVAAGRIGLAVLRRLAPFDV-HLHYTDRHRLPESVEKELNLTWH-------ATR----EDMY----PVCDVVTL  253 (393)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHGGGTC-EEEEECSSCCCHHHHHHHTCEEC-------SSH----HHHG----GGCSEEEE
T ss_pred             CCCEEEEEeECHHHHHHHHHHHhCCC-EEEEEcCCccchhhHhhcCceec-------CCH----HHHH----hcCCEEEE
Confidence            57899999999999999999999999 67888877655566667776421       122    1221    35788888


Q ss_pred             CCCCH----HHH-HHHHHhcccCCEEEEEcC
Q 017916          261 CAGFN----KTM-STALSATRAGGKVCLVGM  286 (364)
Q Consensus       261 ~~g~~----~~~-~~~~~~l~~~G~~v~~g~  286 (364)
                      ++...    ..+ ...+..|+++..++.++.
T Consensus       254 ~~Plt~~t~~li~~~~l~~mk~gailIN~aR  284 (393)
T 2nac_A          254 NCPLHPETEHMINDETLKLFKRGAYIVNTAR  284 (393)
T ss_dssp             CSCCCTTTTTCBSHHHHTTSCTTEEEEECSC
T ss_pred             ecCCchHHHHHhhHHHHhhCCCCCEEEECCC
Confidence            76532    112 356678888888887764

>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*

Probab=94.69  E-value=0.21  Score=44.73  Aligned_cols=87  Identities=17%  Similarity=0.239  Sum_probs=61.5

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcCCCccEEEE
Q 017916          181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  260 (364)
Q Consensus       181 ~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid  260 (364)
                      .|.+|.|.|.|.+|...++.++.+|. .|++.+++.++ +..+.+|...        .++.+.+        ...|+|+.
T Consensus       149 ~g~~vgIIG~G~iG~~iA~~l~~~G~-~V~~~d~~~~~-~~~~~~g~~~--------~~l~~~l--------~~aDvVil  210 (334)
T 2dbq_A          149 YGKTIGIIGLGRIGQAIAKRAKGFNM-RILYYSRTRKE-EVERELNAEF--------KPLEDLL--------RESDFVVL  210 (334)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSCCH-HHHHHHCCEE--------CCHHHHH--------HHCSEEEE
T ss_pred             CCCEEEEEccCHHHHHHHHHHHhCCC-EEEEECCCcch-hhHhhcCccc--------CCHHHHH--------hhCCEEEE
Confidence            56799999999999999999999999 68888887766 5556666521        1222222        24689988


Q ss_pred             CCCCHH----HH-HHHHHhcccCCEEEEEc
Q 017916          261 CAGFNK----TM-STALSATRAGGKVCLVG  285 (364)
Q Consensus       261 ~~g~~~----~~-~~~~~~l~~~G~~v~~g  285 (364)
                      ++....    .+ ...+..|+++..++..+
T Consensus       211 ~vp~~~~t~~~i~~~~~~~mk~~ailIn~s  240 (334)
T 2dbq_A          211 AVPLTRETYHLINEERLKLMKKTAILINIA  240 (334)
T ss_dssp             CCCCCTTTTTCBCHHHHHHSCTTCEEEECS
T ss_pred             CCCCChHHHHhhCHHHHhcCCCCcEEEECC
Confidence            876432    12 34567888888887765

>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53

Probab=94.67  E-value=0.19  Score=41.60  Aligned_cols=98  Identities=16%  Similarity=0.123  Sum_probs=63.7

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHH----cCCCeEEecCCCcccHHHHHHHHHHHcCCCc
Q 017916          180 GPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKE----LGADNIVKVSTNLQDIAEEVEKIQKAMGTGI  255 (364)
Q Consensus       180 ~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~  255 (364)
                      .++.+||-.|+|. |..++.+|+......+++++.+++..+.+++    .+...+..+...-.++.+    .  ...+.+
T Consensus        40 ~~~~~vLDiGcG~-G~~~~~la~~~p~~~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~----~--~~~~~~  112 (214)
T 1yzh_A           40 NDNPIHVEVGSGK-GAFVSGMAKQNPDINYIGIDIQKSVLSYALDKVLEVGVPNIKLLWVDGSDLTD----Y--FEDGEI  112 (214)
T ss_dssp             SCCCEEEEESCTT-SHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCSSEEEEECCSSCGGG----T--SCTTCC
T ss_pred             CCCCeEEEEccCc-CHHHHHHHHHCCCCCEEEEEcCHHHHHHHHHHHHHcCCCCEEEEeCCHHHHHh----h--cCCCCC
Confidence            4678888888764 7788888888744489999999887776654    344332211111112111    0  013468


Q ss_pred             cEEEECCCC--------------HHHHHHHHHhcccCCEEEEE
Q 017916          256 DVSFDCAGF--------------NKTMSTALSATRAGGKVCLV  284 (364)
Q Consensus       256 d~vid~~g~--------------~~~~~~~~~~l~~~G~~v~~  284 (364)
                      |+|+-....              ...+..+.+.|+++|.++..
T Consensus       113 D~i~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~  155 (214)
T 1yzh_A          113 DRLYLNFSDPWPKKRHEKRRLTYKTFLDTFKRILPENGEIHFK  155 (214)
T ss_dssp             SEEEEESCCCCCSGGGGGGSTTSHHHHHHHHHHSCTTCEEEEE
T ss_pred             CEEEEECCCCccccchhhhccCCHHHHHHHHHHcCCCcEEEEE
Confidence            998765443              36888999999999998875

>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9

Probab=94.66  E-value=0.52  Score=36.60  Aligned_cols=95  Identities=13%  Similarity=0.175  Sum_probs=56.6

Q ss_pred             CCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecC-hhHHHHHHH-c--CCCeEEecCCCcccHHHHHHHHHHHcCCCccE
Q 017916          182 ETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVD-DYRLSVAKE-L--GADNIVKVSTNLQDIAEEVEKIQKAMGTGIDV  257 (364)
Q Consensus       182 g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~-~~~~~~~~~-l--g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~  257 (364)
                      ..+|+|.|+|.+|...++.+...|.+ |++++.+ +++.+.++. +  |.. ++.-+..  + .+.+++.   .-.+.|+
T Consensus         3 ~~~vlI~G~G~vG~~la~~L~~~g~~-V~vid~~~~~~~~~~~~~~~~~~~-~i~gd~~--~-~~~l~~a---~i~~ad~   74 (153)
T 1id1_A            3 KDHFIVCGHSILAINTILQLNQRGQN-VTVISNLPEDDIKQLEQRLGDNAD-VIPGDSN--D-SSVLKKA---GIDRCRA   74 (153)
T ss_dssp             CSCEEEECCSHHHHHHHHHHHHTTCC-EEEEECCCHHHHHHHHHHHCTTCE-EEESCTT--S-HHHHHHH---TTTTCSE
T ss_pred             CCcEEEECCCHHHHHHHHHHHHCCCC-EEEEECCChHHHHHHHHhhcCCCe-EEEcCCC--C-HHHHHHc---ChhhCCE
Confidence            46899999999999999999999984 6777775 455544432 2  333 3322221  1 1222222   2357999


Q ss_pred             EEECCCCHHHHH---HHHHhcccCCEEEEE
Q 017916          258 SFDCAGFNKTMS---TALSATRAGGKVCLV  284 (364)
Q Consensus       258 vid~~g~~~~~~---~~~~~l~~~G~~v~~  284 (364)
                      ++-++++.+.-.   ...+.+.+..+++..
T Consensus        75 vi~~~~~d~~n~~~~~~a~~~~~~~~ii~~  104 (153)
T 1id1_A           75 ILALSDNDADNAFVVLSAKDMSSDVKTVLA  104 (153)
T ss_dssp             EEECSSCHHHHHHHHHHHHHHTSSSCEEEE
T ss_pred             EEEecCChHHHHHHHHHHHHHCCCCEEEEE
Confidence            999998643211   223344455566553

>2glx_A 1,5-anhydro-D-fructose reductase; NADP(H) dependent reductase, rossmann-fold, sugar metabolism, 1,5-anhydro-D-mannitol, oxidoreductase; HET: NDP; 2.20A {Ensifer adhaerens}

Probab=94.65  E-value=0.17  Score=45.17  Aligned_cols=130  Identities=17%  Similarity=0.135  Sum_probs=76.6

Q ss_pred             EEEEEcCCHHHHHH-H-HHHHHCCCCEEEEEecChhHHH-HHHHcCCCeEEecCCCcccHHHHHHHHHHHcCCCccEEEE
Q 017916          184 NVLIMGAGPIGLVT-M-LGARAFGAPRIVIVDVDDYRLS-VAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  260 (364)
Q Consensus       184 ~VLI~Gag~~G~~a-i-~la~~~g~~~vv~~~~~~~~~~-~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid  260 (364)
                      +|.|.|+|.+|... + .+.+ .+.+.+.+++.+.++.+ +.+++|....  +    .++.    ++..  ..++|+|+.
T Consensus         2 ~vgiiG~G~~g~~~~~~~l~~-~~~~~vav~d~~~~~~~~~~~~~g~~~~--~----~~~~----~~l~--~~~~D~V~i   68 (332)
T 2glx_A            2 RWGLIGASTIAREWVIGAIRA-TGGEVVSMMSTSAERGAAYATENGIGKS--V----TSVE----ELVG--DPDVDAVYV   68 (332)
T ss_dssp             EEEEESCCHHHHHTHHHHHHH-TTCEEEEEECSCHHHHHHHHHHTTCSCC--B----SCHH----HHHT--CTTCCEEEE
T ss_pred             eEEEEcccHHHHHhhhHHhhc-CCCeEEEEECCCHHHHHHHHHHcCCCcc--c----CCHH----HHhc--CCCCCEEEE
Confidence            68899999999875 5 4445 77755556777777664 4566776422  1    1222    2221  246999999


Q ss_pred             CCCCHHHHHHHHHhcccCCEEEEEcCCCCCcccc---chhh-hhcCcEEEee--ccCCCcHHHHHHHHHcCCC
Q 017916          261 CAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVP---LTPA-AVREVDVVGV--FRYKNTWPLCLELLRSGKI  327 (364)
Q Consensus       261 ~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~---~~~~-~~~~~~~~~~--~~~~~~~~~~~~~l~~g~~  327 (364)
                      |+....+...+..+|..| +.+.+.-+.......   +... -.+++.+.-.  ..+...+..+.+++++|.+
T Consensus        69 ~tp~~~h~~~~~~al~~G-k~v~~ekP~~~~~~~~~~l~~~a~~~g~~~~~~~~~r~~p~~~~~~~~i~~g~i  140 (332)
T 2glx_A           69 STTNELHREQTLAAIRAG-KHVLCEKPLAMTLEDAREMVVAAREAGVVLGTNHHLRNAAAHRAMRDAIAEGRI  140 (332)
T ss_dssp             CSCGGGHHHHHHHHHHTT-CEEEECSSSCSSHHHHHHHHHHHHHHTCCEEECCCGGGSHHHHHHHHHHHTTTT
T ss_pred             eCChhHhHHHHHHHHHCC-CeEEEeCCCcCCHHHHHHHHHHHHHcCCEEEEeehhhcCHHHHHHHHHHHcCCC
Confidence            999777777788888764 555554221111101   1111 1233333322  2235567888899998876

>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}

Probab=94.63  E-value=0.2  Score=41.91  Aligned_cols=98  Identities=20%  Similarity=0.320  Sum_probs=64.6

Q ss_pred             cCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHH----cCC-CeEEecCCCcccHHHHHHHHHHHc
Q 017916          177 ANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKE----LGA-DNIVKVSTNLQDIAEEVEKIQKAM  251 (364)
Q Consensus       177 ~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~----lg~-~~~~~~~~~~~~~~~~i~~~~~~~  251 (364)
                      ..++++++||-.|+|..|..++.+++..+. .+++++.+++..+.+++    .+. ..++.-+.  ..+.    .+   .
T Consensus        51 ~~~~~~~~vLDlG~G~~G~~~~~la~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~--~~~~----~~---~  120 (230)
T 3evz_A           51 TFLRGGEVALEIGTGHTAMMALMAEKFFNC-KVTATEVDEEFFEYARRNIERNNSNVRLVKSNG--GIIK----GV---V  120 (230)
T ss_dssp             TTCCSSCEEEEECCTTTCHHHHHHHHHHCC-EEEEEECCHHHHHHHHHHHHHTTCCCEEEECSS--CSST----TT---C
T ss_pred             hhcCCCCEEEEcCCCHHHHHHHHHHHhcCC-EEEEEECCHHHHHHHHHHHHHhCCCcEEEeCCc--hhhh----hc---c
Confidence            446789999999888558888888887655 79999999988776653    343 12222111  0010    01   1


Q ss_pred             CCCccEEEECCC-------------------------CHHHHHHHHHhcccCCEEEEE
Q 017916          252 GTGIDVSFDCAG-------------------------FNKTMSTALSATRAGGKVCLV  284 (364)
Q Consensus       252 ~~~~d~vid~~g-------------------------~~~~~~~~~~~l~~~G~~v~~  284 (364)
                      ...+|+|+....                         ....+..+.+.|+++|+++.+
T Consensus       121 ~~~fD~I~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~  178 (230)
T 3evz_A          121 EGTFDVIFSAPPYYDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPGGKVALY  178 (230)
T ss_dssp             CSCEEEEEECCCCC---------------CCSSSCHHHHHHHHHHGGGEEEEEEEEEE
T ss_pred             cCceeEEEECCCCcCCccccccChhhhhccCccchHHHHHHHHHHHHHhCCCeEEEEE
Confidence            357999985311                         045677888899999999875

>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A*

Probab=94.61  E-value=0.27  Score=44.98  Aligned_cols=86  Identities=17%  Similarity=0.150  Sum_probs=52.0

Q ss_pred             cCC-CCCCEEEEEcC-CHHHHHHHHHHHH-CCCCEEEEEecChhH----------------HHHHHHcCCCe-EEecCC-
Q 017916          177 ANI-GPETNVLIMGA-GPIGLVTMLGARA-FGAPRIVIVDVDDYR----------------LSVAKELGADN-IVKVST-  235 (364)
Q Consensus       177 ~~~-~~g~~VLI~Ga-g~~G~~ai~la~~-~g~~~vv~~~~~~~~----------------~~~~~~lg~~~-~~~~~~-  235 (364)
                      ..+ ..+.++||+|+ +++|.+.+..+.. .|+ .|++++.+.+.                .+.+++.|... .+..+- 
T Consensus        41 ~~~~~~gKvaLVTGas~GIG~AiA~~LA~g~GA-~Vv~~~~~~~~~~~~~~~~gwyn~~~~~~~~~~~G~~a~~i~~Dvt  119 (405)
T 3zu3_A           41 GPIANGPKRVLVIGASTGYGLAARITAAFGCGA-DTLGVFFERPGEEGKPGTSGWYNSAAFHKFAAQKGLYAKSINGDAF  119 (405)
T ss_dssp             CCCTTCCSEEEEESCSSHHHHHHHHHHHHHHCC-EEEEEECCCCCBTTBCCCHHHHHHHHHHHHHHHTTCCEEEEESCTT
T ss_pred             CCcCCCCCEEEEeCcchHHHHHHHHHHHHhcCC-EEEEEeCCchhhhhhcccccchhHHHHHHHHHhcCCceEEEECCCC
Confidence            444 44677899997 9999988888877 899 45555443221                22345556442 222222 


Q ss_pred             CcccHHHHHHHHHHHcCCCccEEEECCCC
Q 017916          236 NLQDIAEEVEKIQKAMGTGIDVSFDCAGF  264 (364)
Q Consensus       236 ~~~~~~~~i~~~~~~~~~~~d~vid~~g~  264 (364)
                      ..++..+.+..+.+.. +++|++++++|.
T Consensus       120 d~~~v~~~v~~i~~~~-G~IDiLVNNAG~  147 (405)
T 3zu3_A          120 SDEIKQLTIDAIKQDL-GQVDQVIYSLAS  147 (405)
T ss_dssp             SHHHHHHHHHHHHHHT-SCEEEEEECCCC
T ss_pred             CHHHHHHHHHHHHHHc-CCCCEEEEcCcc
Confidence            2234444444444433 579999999875

>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}

Probab=94.58  E-value=0.22  Score=46.82  Aligned_cols=95  Identities=16%  Similarity=0.160  Sum_probs=59.1

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHC-CCCEEEEEecChhHHHHHHH-cCCCeEEecCCCcccHHHHHHHHHHHcCCCccEE
Q 017916          181 PETNVLIMGAGPIGLVTMLGARAF-GAPRIVIVDVDDYRLSVAKE-LGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVS  258 (364)
Q Consensus       181 ~g~~VLI~Gag~~G~~ai~la~~~-g~~~vv~~~~~~~~~~~~~~-lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~v  258 (364)
                      .+.+|+|.|+|.+|.+++..+... +. .|.+++++.++.+.+.+ .+.. .+..+-.  +.. .+.+..    .++|+|
T Consensus        22 ~~k~VlIiGAGgiG~aia~~L~~~~g~-~V~v~~R~~~ka~~la~~~~~~-~~~~D~~--d~~-~l~~~l----~~~DvV   92 (467)
T 2axq_A           22 MGKNVLLLGSGFVAQPVIDTLAANDDI-NVTVACRTLANAQALAKPSGSK-AISLDVT--DDS-ALDKVL----ADNDVV   92 (467)
T ss_dssp             -CEEEEEECCSTTHHHHHHHHHTSTTE-EEEEEESSHHHHHHHHGGGTCE-EEECCTT--CHH-HHHHHH----HTSSEE
T ss_pred             CCCEEEEECChHHHHHHHHHHHhCCCC-eEEEEECCHHHHHHHHHhcCCc-EEEEecC--CHH-HHHHHH----cCCCEE
Confidence            356899999999999998888877 66 67778888777654433 3432 2222211  221 233332    268999


Q ss_pred             EECCCCHHHHHHHHHhcccCCEEEEE
Q 017916          259 FDCAGFNKTMSTALSATRAGGKVCLV  284 (364)
Q Consensus       259 id~~g~~~~~~~~~~~l~~~G~~v~~  284 (364)
                      |+|++..........++.++-.++..
T Consensus        93 In~tp~~~~~~v~~a~l~~g~~vvd~  118 (467)
T 2axq_A           93 ISLIPYTFHPNVVKSAIRTKTDVVTS  118 (467)
T ss_dssp             EECSCGGGHHHHHHHHHHHTCEEEEC
T ss_pred             EECCchhhhHHHHHHHHhcCCEEEEe
Confidence            99998543333345566767666664

>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*

Probab=94.58  E-value=0.31  Score=43.24  Aligned_cols=90  Identities=20%  Similarity=0.145  Sum_probs=60.2

Q ss_pred             CEEEEEcCCHHHHHHHHHHHHCCCC-EEEEEecChhHHHHHHHcCCC-eEEecCCCcccHHHHHHHHHHHcCCCccEEEE
Q 017916          183 TNVLIMGAGPIGLVTMLGARAFGAP-RIVIVDVDDYRLSVAKELGAD-NIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  260 (364)
Q Consensus       183 ~~VLI~Gag~~G~~ai~la~~~g~~-~vv~~~~~~~~~~~~~~lg~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid  260 (364)
                      .+|.|.|.|.+|.+.++.++..|.. .|++.++++++.+.+.++|.. ....  +. .++      .    -...|+||-
T Consensus        34 ~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~~~~~~a~~~G~~~~~~~--~~-~~~------~----~~~aDvVil  100 (314)
T 3ggo_A           34 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTT--SI-AKV------E----DFSPDFVML  100 (314)
T ss_dssp             SEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEES--CT-TGG------G----GGCCSEEEE
T ss_pred             CEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHCCCcchhcC--CH-HHH------h----hccCCEEEE
Confidence            6899999999999999999888873 588889999888888888863 1111  11 110      0    135788888


Q ss_pred             CCCCH---HHHHHHHHhcccCCEEEEEc
Q 017916          261 CAGFN---KTMSTALSATRAGGKVCLVG  285 (364)
Q Consensus       261 ~~g~~---~~~~~~~~~l~~~G~~v~~g  285 (364)
                      |+...   +.+..+...++++..++.++
T Consensus       101 avp~~~~~~vl~~l~~~l~~~~iv~d~~  128 (314)
T 3ggo_A          101 SSPVRTFREIAKKLSYILSEDATVTDQG  128 (314)
T ss_dssp             CSCGGGHHHHHHHHHHHSCTTCEEEECC
T ss_pred             eCCHHHHHHHHHHHhhccCCCcEEEECC
Confidence            77642   23334445566666665554

>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}

Probab=94.58  E-value=0.81  Score=37.89  Aligned_cols=75  Identities=16%  Similarity=0.068  Sum_probs=51.9

Q ss_pred             EEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHH-HcCCCeEEecCCCcccHHHHHHHHHHHcCCCccEEEECC
Q 017916          184 NVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAK-ELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCA  262 (364)
Q Consensus       184 ~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~-~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid~~  262 (364)
                      +|+|.|+|.+|...++.+...|. .|++++.++++.+.+. .++... +.-+..+   .+.+++   ..-.++|++|-++
T Consensus         2 ~iiIiG~G~~G~~la~~L~~~g~-~v~vid~~~~~~~~l~~~~~~~~-i~gd~~~---~~~l~~---a~i~~ad~vi~~~   73 (218)
T 3l4b_C            2 KVIIIGGETTAYYLARSMLSRKY-GVVIINKDRELCEEFAKKLKATI-IHGDGSH---KEILRD---AEVSKNDVVVILT   73 (218)
T ss_dssp             CEEEECCHHHHHHHHHHHHHTTC-CEEEEESCHHHHHHHHHHSSSEE-EESCTTS---HHHHHH---HTCCTTCEEEECC
T ss_pred             EEEEECCCHHHHHHHHHHHhCCC-eEEEEECCHHHHHHHHHHcCCeE-EEcCCCC---HHHHHh---cCcccCCEEEEec
Confidence            58899999999999999999999 5788888888877654 456543 3222222   122222   2235799999999


Q ss_pred             CCHH
Q 017916          263 GFNK  266 (364)
Q Consensus       263 g~~~  266 (364)
                      ++..
T Consensus        74 ~~d~   77 (218)
T 3l4b_C           74 PRDE   77 (218)
T ss_dssp             SCHH
T ss_pred             CCcH
Confidence            9653

>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}

Probab=94.57  E-value=0.35  Score=40.62  Aligned_cols=102  Identities=16%  Similarity=0.245  Sum_probs=65.8

Q ss_pred             HHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcCCC
Q 017916          175 RRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTG  254 (364)
Q Consensus       175 ~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~  254 (364)
                      ......++.+||-.|+|. |..+..+++. |...+++++.+++..+.+++.....-+.+..  .++.+    + ......
T Consensus        37 ~~~~~~~~~~vLdiG~G~-G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~--~d~~~----~-~~~~~~  107 (243)
T 3bkw_A           37 AMLPEVGGLRIVDLGCGF-GWFCRWAHEH-GASYVLGLDLSEKMLARARAAGPDTGITYER--ADLDK----L-HLPQDS  107 (243)
T ss_dssp             HHSCCCTTCEEEEETCTT-CHHHHHHHHT-TCSEEEEEESCHHHHHHHHHTSCSSSEEEEE--CCGGG----C-CCCTTC
T ss_pred             HhccccCCCEEEEEcCcC-CHHHHHHHHC-CCCeEEEEcCCHHHHHHHHHhcccCCceEEE--cChhh----c-cCCCCC
Confidence            345567889999998754 6666677765 6657999999999888888754321011100  11110    0 001357


Q ss_pred             ccEEEECCC------CHHHHHHHHHhcccCCEEEEEc
Q 017916          255 IDVSFDCAG------FNKTMSTALSATRAGGKVCLVG  285 (364)
Q Consensus       255 ~d~vid~~g------~~~~~~~~~~~l~~~G~~v~~g  285 (364)
                      +|+|+....      ....+..+.+.|+|+|+++...
T Consensus       108 fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~  144 (243)
T 3bkw_A          108 FDLAYSSLALHYVEDVARLFRTVHQALSPGGHFVFST  144 (243)
T ss_dssp             EEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             ceEEEEeccccccchHHHHHHHHHHhcCcCcEEEEEe
Confidence            999986432      1457788999999999998753

>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53

Probab=94.53  E-value=0.32  Score=40.29  Aligned_cols=98  Identities=9%  Similarity=0.088  Sum_probs=63.8

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHH----cCCCeEEecCCCcccHHHHHHHHHHHcCCCc
Q 017916          180 GPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKE----LGADNIVKVSTNLQDIAEEVEKIQKAMGTGI  255 (364)
Q Consensus       180 ~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~  255 (364)
                      .++.+||=.|+|. |..++.+|+......+++++.+++..+.+++    .+...+......-.++    ....  ....+
T Consensus        37 ~~~~~vLDiGcG~-G~~~~~la~~~p~~~v~giD~s~~~l~~a~~~~~~~~~~nv~~~~~d~~~l----~~~~--~~~~~  109 (213)
T 2fca_A           37 NDNPIHIEVGTGK-GQFISGMAKQNPDINYIGIELFKSVIVTAVQKVKDSEAQNVKLLNIDADTL----TDVF--EPGEV  109 (213)
T ss_dssp             SCCCEEEEECCTT-SHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHSCCSSEEEECCCGGGH----HHHC--CTTSC
T ss_pred             CCCceEEEEecCC-CHHHHHHHHHCCCCCEEEEEechHHHHHHHHHHHHcCCCCEEEEeCCHHHH----Hhhc--CcCCc
Confidence            3567888888765 7788888988754489999999988776654    4554332222221222    1111  13468


Q ss_pred             cEEEECCC--------------CHHHHHHHHHhcccCCEEEEE
Q 017916          256 DVSFDCAG--------------FNKTMSTALSATRAGGKVCLV  284 (364)
Q Consensus       256 d~vid~~g--------------~~~~~~~~~~~l~~~G~~v~~  284 (364)
                      |.|+-...              ....+..+.+.|+|+|.++..
T Consensus       110 d~v~~~~~~p~~~~~~~~~rl~~~~~l~~~~~~LkpgG~l~~~  152 (213)
T 2fca_A          110 KRVYLNFSDPWPKKRHEKRRLTYSHFLKKYEEVMGKGGSIHFK  152 (213)
T ss_dssp             CEEEEESCCCCCSGGGGGGSTTSHHHHHHHHHHHTTSCEEEEE
T ss_pred             CEEEEECCCCCcCccccccccCcHHHHHHHHHHcCCCCEEEEE
Confidence            88764332              146788999999999999875

>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}

Probab=94.52  E-value=0.091  Score=46.61  Aligned_cols=95  Identities=14%  Similarity=0.127  Sum_probs=62.7

Q ss_pred             CEEEEEcCCHHHHHHHHHHHHC-CCCEEEEEecChhHHHHHHH-cCCC---eEEecCCCcccHHHHHHHHHHHcCCCccE
Q 017916          183 TNVLIMGAGPIGLVTMLGARAF-GAPRIVIVDVDDYRLSVAKE-LGAD---NIVKVSTNLQDIAEEVEKIQKAMGTGIDV  257 (364)
Q Consensus       183 ~~VLI~Gag~~G~~ai~la~~~-g~~~vv~~~~~~~~~~~~~~-lg~~---~~~~~~~~~~~~~~~i~~~~~~~~~~~d~  257 (364)
                      .+||+.|+|. |..+..+++.. +. .+.+++.+++-.+++++ ++..   .+..+   ..|..+.++.   ...+.||+
T Consensus        91 ~rVLdIG~G~-G~la~~la~~~p~~-~v~~VEidp~vi~~Ar~~~~~~~~~rv~v~---~~Da~~~l~~---~~~~~fDv  162 (317)
T 3gjy_A           91 LRITHLGGGA-CTMARYFADVYPQS-RNTVVELDAELARLSREWFDIPRAPRVKIR---VDDARMVAES---FTPASRDV  162 (317)
T ss_dssp             CEEEEESCGG-GHHHHHHHHHSTTC-EEEEEESCHHHHHHHHHHSCCCCTTTEEEE---ESCHHHHHHT---CCTTCEEE
T ss_pred             CEEEEEECCc-CHHHHHHHHHCCCc-EEEEEECCHHHHHHHHHhccccCCCceEEE---ECcHHHHHhh---ccCCCCCE
Confidence            4999998755 67788888865 55 78999999999998876 3321   11111   1233322221   11357999


Q ss_pred             EEECC-C---------CHHHHHHHHHhcccCCEEEEEc
Q 017916          258 SFDCA-G---------FNKTMSTALSATRAGGKVCLVG  285 (364)
Q Consensus       258 vid~~-g---------~~~~~~~~~~~l~~~G~~v~~g  285 (364)
                      ||-.. .         +.+.+..+.++|+++|.++...
T Consensus       163 Ii~D~~~~~~~~~~L~t~efl~~~~r~LkpgGvlv~~~  200 (317)
T 3gjy_A          163 IIRDVFAGAITPQNFTTVEFFEHCHRGLAPGGLYVANC  200 (317)
T ss_dssp             EEECCSTTSCCCGGGSBHHHHHHHHHHEEEEEEEEEEE
T ss_pred             EEECCCCccccchhhhHHHHHHHHHHhcCCCcEEEEEe
Confidence            87522 1         1467889999999999988654

>2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp}

Probab=94.48  E-value=0.095  Score=48.93  Aligned_cols=103  Identities=16%  Similarity=0.180  Sum_probs=67.9

Q ss_pred             CCCCCEEEEEcCCHHHHHHHHHHHH-CCCC--EEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcCCCc
Q 017916          179 IGPETNVLIMGAGPIGLVTMLGARA-FGAP--RIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGI  255 (364)
Q Consensus       179 ~~~g~~VLI~Gag~~G~~ai~la~~-~g~~--~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~  255 (364)
                      +....+|||+|+|++|..++.++.. .+..  .|++++..+.+.++.+.+|.. .....-...+..+.+.++.   .++ 
T Consensus        10 ~~~~~rVlIIGaGgVG~~va~lla~~~dv~~~~I~vaD~~~~~~~~~~~~g~~-~~~~~Vdadnv~~~l~aLl---~~~-   84 (480)
T 2ph5_A           10 ILFKNRFVILGFGCVGQALMPLIFEKFDIKPSQVTIIAAEGTKVDVAQQYGVS-FKLQQITPQNYLEVIGSTL---EEN-   84 (480)
T ss_dssp             BCCCSCEEEECCSHHHHHHHHHHHHHBCCCGGGEEEEESSCCSCCHHHHHTCE-EEECCCCTTTHHHHTGGGC---CTT-
T ss_pred             ecCCCCEEEECcCHHHHHHHHHHHhCCCCceeEEEEeccchhhhhHHhhcCCc-eeEEeccchhHHHHHHHHh---cCC-
Confidence            4456789999999999999988865 4552  567777766666666667753 2222222234434343332   333 


Q ss_pred             cEEEECCCCHHHHHHHHHhcccCCEEEEEcC
Q 017916          256 DVSFDCAGFNKTMSTALSATRAGGKVCLVGM  286 (364)
Q Consensus       256 d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~  286 (364)
                      |+||+++-....+..+-.|+..|-.++....
T Consensus        85 DvVIN~s~~~~~l~Im~acleaGv~YlDTa~  115 (480)
T 2ph5_A           85 DFLIDVSIGISSLALIILCNQKGALYINAAT  115 (480)
T ss_dssp             CEEEECCSSSCHHHHHHHHHHHTCEEEESSC
T ss_pred             CEEEECCccccCHHHHHHHHHcCCCEEECCC
Confidence            9999977655566777788888888888764

>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}

Probab=94.47  E-value=0.11  Score=46.80  Aligned_cols=89  Identities=18%  Similarity=0.166  Sum_probs=61.8

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcCCCccEEEE
Q 017916          181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  260 (364)
Q Consensus       181 ~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid  260 (364)
                      .|.+|.|.|.|.+|...++.++.+|+ .|++.+++. +.+.....|+..+       .++.+    +.    ...|+|+-
T Consensus       159 ~g~tvGIIGlG~IG~~vA~~l~~~G~-~V~~~d~~~-~~~~~~~~g~~~~-------~~l~e----ll----~~aDiV~l  221 (352)
T 3gg9_A          159 KGQTLGIFGYGKIGQLVAGYGRAFGM-NVLVWGREN-SKERARADGFAVA-------ESKDA----LF----EQSDVLSV  221 (352)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSHH-HHHHHHHTTCEEC-------SSHHH----HH----HHCSEEEE
T ss_pred             CCCEEEEEeECHHHHHHHHHHHhCCC-EEEEECCCC-CHHHHHhcCceEe-------CCHHH----HH----hhCCEEEE
Confidence            47899999999999999999999999 688887654 4455566776421       12222    22    24689888


Q ss_pred             CCCCH-HH----HHHHHHhcccCCEEEEEcC
Q 017916          261 CAGFN-KT----MSTALSATRAGGKVCLVGM  286 (364)
Q Consensus       261 ~~g~~-~~----~~~~~~~l~~~G~~v~~g~  286 (364)
                      ++... ++    -...+..|+++..++.++.
T Consensus       222 ~~Plt~~t~~li~~~~l~~mk~gailIN~aR  252 (352)
T 3gg9_A          222 HLRLNDETRSIITVADLTRMKPTALFVNTSR  252 (352)
T ss_dssp             CCCCSTTTTTCBCHHHHTTSCTTCEEEECSC
T ss_pred             eccCcHHHHHhhCHHHHhhCCCCcEEEECCC
Confidence            76422 11    1356788999999988873

>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*

Probab=94.45  E-value=0.14  Score=45.55  Aligned_cols=79  Identities=18%  Similarity=0.155  Sum_probs=46.5

Q ss_pred             CCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHH--HHHHHcCC-CeEEecCCCcccHHHHHHHHHHHcCCCccE
Q 017916          182 ETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRL--SVAKELGA-DNIVKVSTNLQDIAEEVEKIQKAMGTGIDV  257 (364)
Q Consensus       182 g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~--~~~~~lg~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~  257 (364)
                      +.+|||+|+ |.+|...++.+...|+ .|++++++..+.  +.++.++. ..+..+..+-.+ .+.+.+....  .++|+
T Consensus         3 ~~~vlVtGatG~iG~~l~~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d-~~~~~~~~~~--~~~d~   78 (345)
T 2z1m_A            3 GKRALITGIRGQDGAYLAKLLLEKGY-EVYGADRRSGEFASWRLKELGIENDVKIIHMDLLE-FSNIIRTIEK--VQPDE   78 (345)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEECSCCSTTTTHHHHHTTCTTTEEECCCCTTC-HHHHHHHHHH--HCCSE
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCC-EEEEEECCCcccccccHhhccccCceeEEECCCCC-HHHHHHHHHh--cCCCE
Confidence            578999998 9999999998888898 577777665432  23344421 111111111112 1223333221  15899


Q ss_pred             EEECCCC
Q 017916          258 SFDCAGF  264 (364)
Q Consensus       258 vid~~g~  264 (364)
                      ||.++|.
T Consensus        79 vih~A~~   85 (345)
T 2z1m_A           79 VYNLAAQ   85 (345)
T ss_dssp             EEECCCC
T ss_pred             EEECCCC
Confidence            9999874

>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46

Probab=94.44  E-value=0.23  Score=39.52  Aligned_cols=98  Identities=13%  Similarity=0.139  Sum_probs=60.5

Q ss_pred             CCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHH----cCCC-eEEecCCCcccHHHHHHHHHHHcCC
Q 017916          179 IGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKE----LGAD-NIVKVSTNLQDIAEEVEKIQKAMGT  253 (364)
Q Consensus       179 ~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~----lg~~-~~~~~~~~~~~~~~~i~~~~~~~~~  253 (364)
                      ..++++||-.|+|. |..+..+++. +...+++++.+++..+.+++    .+.. .+....   .++.+.+.    ....
T Consensus        29 ~~~~~~vLDlGcG~-G~~~~~l~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~---~d~~~~~~----~~~~   99 (177)
T 2esr_A           29 YFNGGRVLDLFAGS-GGLAIEAVSR-GMSAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLK---MEAERAID----CLTG   99 (177)
T ss_dssp             CCCSCEEEEETCTT-CHHHHHHHHT-TCCEEEEECCCHHHHHHHHHHHHTTTCGGGEEEEC---SCHHHHHH----HBCS
T ss_pred             hcCCCeEEEeCCCC-CHHHHHHHHc-CCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEE---CcHHHhHH----hhcC
Confidence            57889999998754 5566666666 66689999999988777654    3332 121111   33333221    2245


Q ss_pred             CccEEEECCCC-----HHHHHHHH--HhcccCCEEEEEc
Q 017916          254 GIDVSFDCAGF-----NKTMSTAL--SATRAGGKVCLVG  285 (364)
Q Consensus       254 ~~d~vid~~g~-----~~~~~~~~--~~l~~~G~~v~~g  285 (364)
                      .+|+|+....-     .+.+..+.  +.|+++|.++..-
T Consensus       100 ~fD~i~~~~~~~~~~~~~~~~~l~~~~~L~~gG~l~~~~  138 (177)
T 2esr_A          100 RFDLVFLDPPYAKETIVATIEALAAKNLLSEQVMVVCET  138 (177)
T ss_dssp             CEEEEEECCSSHHHHHHHHHHHHHHTTCEEEEEEEEEEE
T ss_pred             CCCEEEECCCCCcchHHHHHHHHHhCCCcCCCcEEEEEE
Confidence            69999864221     23444444  7789999988764

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A

Probab=94.43  E-value=0.044  Score=46.77  Aligned_cols=77  Identities=18%  Similarity=0.227  Sum_probs=47.6

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcCCCccEEE
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF  259 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vi  259 (364)
                      .+.++||+|+ |.+|.+.++.+...|+ .|++++++.++.+.+.  +  ...|.. ..+++.+.++...+.. +++|++|
T Consensus        14 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~--~--~~~D~~-~~~~~~~~~~~~~~~~-g~id~lv   86 (247)
T 1uzm_A           14 VSRSVLVTGGNRGIGLAIAQRLAADGH-KVAVTHRGSGAPKGLF--G--VEVDVT-DSDAVDRAFTAVEEHQ-GPVEVLV   86 (247)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSSCCCTTSE--E--EECCTT-CHHHHHHHHHHHHHHH-SSCSEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCChHHHHHhc--C--eeccCC-CHHHHHHHHHHHHHHc-CCCCEEE
Confidence            4678999998 9999999999988999 5666666554322111  1  112222 2233333344333322 4799999


Q ss_pred             ECCCC
Q 017916          260 DCAGF  264 (364)
Q Consensus       260 d~~g~  264 (364)
                      +++|.
T Consensus        87 ~~Ag~   91 (247)
T 1uzm_A           87 SNAGL   91 (247)
T ss_dssp             EECSC
T ss_pred             ECCCC
Confidence            98873

>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6

Probab=94.42  E-value=0.34  Score=41.98  Aligned_cols=89  Identities=22%  Similarity=0.190  Sum_probs=58.8

Q ss_pred             EEEEEcCCHHHHHHHHHHHHCCCC-EEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcCC-CccEEEEC
Q 017916          184 NVLIMGAGPIGLVTMLGARAFGAP-RIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGT-GIDVSFDC  261 (364)
Q Consensus       184 ~VLI~Gag~~G~~ai~la~~~g~~-~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~d~vid~  261 (364)
                      +|.|.|+|.+|.+.++.++..|.. .|++.++++++.+.++++|..... ..    +..+    .    -. ..|+||.|
T Consensus         3 ~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~~g~~~~~-~~----~~~~----~----~~~~aDvVila   69 (281)
T 2g5c_A            3 NVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEG-TT----SIAK----V----EDFSPDFVMLS   69 (281)
T ss_dssp             EEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEE-ES----CGGG----G----GGTCCSEEEEC
T ss_pred             EEEEEecCHHHHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHCCCcccc-cC----CHHH----H----hcCCCCEEEEc
Confidence            688999999999999988888862 578888888888888888864211 11    1111    0    13 67999998


Q ss_pred             CCCHHH---HHHHHHhcccCCEEEEEc
Q 017916          262 AGFNKT---MSTALSATRAGGKVCLVG  285 (364)
Q Consensus       262 ~g~~~~---~~~~~~~l~~~G~~v~~g  285 (364)
                      +.....   +..+...++++..++.++
T Consensus        70 vp~~~~~~v~~~l~~~l~~~~iv~~~~   96 (281)
T 2g5c_A           70 SPVRTFREIAKKLSYILSEDATVTDQG   96 (281)
T ss_dssp             SCHHHHHHHHHHHHHHSCTTCEEEECC
T ss_pred             CCHHHHHHHHHHHHhhCCCCcEEEECC
Confidence            884322   222334566666666554

>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}

Probab=94.39  E-value=0.22  Score=41.88  Aligned_cols=94  Identities=19%  Similarity=0.280  Sum_probs=63.6

Q ss_pred             CCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCC-C--eEEecCCCcccHHHHHHHHHHHcCCCc
Q 017916          179 IGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGA-D--NIVKVSTNLQDIAEEVEKIQKAMGTGI  255 (364)
Q Consensus       179 ~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~-~--~~~~~~~~~~~~~~~i~~~~~~~~~~~  255 (364)
                      ++++.+||-.|+|. |..+..+++. |. .+++++.++...+.+++... .  ..+..+.  .++.        .....+
T Consensus        51 ~~~~~~vLDiG~G~-G~~~~~l~~~-~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~--~~~~--------~~~~~f  117 (242)
T 3l8d_A           51 VKKEAEVLDVGCGD-GYGTYKLSRT-GY-KAVGVDISEVMIQKGKERGEGPDLSFIKGDL--SSLP--------FENEQF  117 (242)
T ss_dssp             SCTTCEEEEETCTT-SHHHHHHHHT-TC-EEEEEESCHHHHHHHHTTTCBTTEEEEECBT--TBCS--------SCTTCE
T ss_pred             cCCCCeEEEEcCCC-CHHHHHHHHc-CC-eEEEEECCHHHHHHHHhhcccCCceEEEcch--hcCC--------CCCCCc
Confidence            46889999998754 6667777776 77 79999999998888877531 1  1121111  1110        013579


Q ss_pred             cEEEECCC-----C-HHHHHHHHHhcccCCEEEEEc
Q 017916          256 DVSFDCAG-----F-NKTMSTALSATRAGGKVCLVG  285 (364)
Q Consensus       256 d~vid~~g-----~-~~~~~~~~~~l~~~G~~v~~g  285 (364)
                      |+|+....     . ...+..+.+.|+|+|+++...
T Consensus       118 D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~  153 (242)
T 3l8d_A          118 EAIMAINSLEWTEEPLRALNEIKRVLKSDGYACIAI  153 (242)
T ss_dssp             EEEEEESCTTSSSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             cEEEEcChHhhccCHHHHHHHHHHHhCCCeEEEEEE
Confidence            99986432     1 367888999999999998765

>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}

Probab=94.37  E-value=0.17  Score=41.74  Aligned_cols=94  Identities=15%  Similarity=0.137  Sum_probs=63.7

Q ss_pred             cCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHc-CCCeEEecCCCcccHHHHHHHHHHHcCCCc
Q 017916          177 ANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKEL-GADNIVKVSTNLQDIAEEVEKIQKAMGTGI  255 (364)
Q Consensus       177 ~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~l-g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~  255 (364)
                      ..+.++.+||-.|+|. |..+..+++. |. .+++++.+++..+.+++. +..... .+.  .++       .  ..+.+
T Consensus        39 ~~~~~~~~vLDiGcG~-G~~~~~l~~~-~~-~v~~vD~s~~~~~~a~~~~~~~~~~-~d~--~~~-------~--~~~~f  103 (211)
T 3e23_A           39 GELPAGAKILELGCGA-GYQAEAMLAA-GF-DVDATDGSPELAAEASRRLGRPVRT-MLF--HQL-------D--AIDAY  103 (211)
T ss_dssp             TTSCTTCEEEESSCTT-SHHHHHHHHT-TC-EEEEEESCHHHHHHHHHHHTSCCEE-CCG--GGC-------C--CCSCE
T ss_pred             HhcCCCCcEEEECCCC-CHHHHHHHHc-CC-eEEEECCCHHHHHHHHHhcCCceEE-eee--ccC-------C--CCCcE
Confidence            4567889999988754 6666677766 76 799999999888887764 443221 111  110       0  14679


Q ss_pred             cEEEECCC--------CHHHHHHHHHhcccCCEEEEEc
Q 017916          256 DVSFDCAG--------FNKTMSTALSATRAGGKVCLVG  285 (364)
Q Consensus       256 d~vid~~g--------~~~~~~~~~~~l~~~G~~v~~g  285 (364)
                      |+|+....        -...+..+.+.|+|+|+++..-
T Consensus       104 D~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~  141 (211)
T 3e23_A          104 DAVWAHACLLHVPRDELADVLKLIWRALKPGGLFYASY  141 (211)
T ss_dssp             EEEEECSCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             EEEEecCchhhcCHHHHHHHHHHHHHhcCCCcEEEEEE
Confidence            99987532        1256788999999999998763

>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}

Probab=94.36  E-value=0.14  Score=43.16  Aligned_cols=101  Identities=16%  Similarity=0.149  Sum_probs=63.6

Q ss_pred             CCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHH----cCCC-eEEecCCCcccHHHHHHHHHHHcC
Q 017916          178 NIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKE----LGAD-NIVKVSTNLQDIAEEVEKIQKAMG  252 (364)
Q Consensus       178 ~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~----lg~~-~~~~~~~~~~~~~~~i~~~~~~~~  252 (364)
                      ...++.+||-.|+|. |..++.+|+......+++++.+++..+.+++    .+.. .+.....   +..+.+..   ...
T Consensus        68 ~~~~~~~vLDiG~G~-G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~---d~~~~~~~---~~~  140 (232)
T 3ntv_A           68 RMNNVKNILEIGTAI-GYSSMQFASISDDIHVTTIERNETMIQYAKQNLATYHFENQVRIIEG---NALEQFEN---VND  140 (232)
T ss_dssp             HHHTCCEEEEECCSS-SHHHHHHHTTCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEES---CGGGCHHH---HTT
T ss_pred             hhcCCCEEEEEeCch-hHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEC---CHHHHHHh---hcc
Confidence            345778999998754 6677788886534489999999988776654    4542 2211111   11111210   114


Q ss_pred             CCccEEEECCCC---HHHHHHHHHhcccCCEEEEEc
Q 017916          253 TGIDVSFDCAGF---NKTMSTALSATRAGGKVCLVG  285 (364)
Q Consensus       253 ~~~d~vid~~g~---~~~~~~~~~~l~~~G~~v~~g  285 (364)
                      ..+|+||-....   ...+..+.+.|+|+|.++.-+
T Consensus       141 ~~fD~V~~~~~~~~~~~~l~~~~~~LkpgG~lv~d~  176 (232)
T 3ntv_A          141 KVYDMIFIDAAKAQSKKFFEIYTPLLKHQGLVITDN  176 (232)
T ss_dssp             SCEEEEEEETTSSSHHHHHHHHGGGEEEEEEEEEEC
T ss_pred             CCccEEEEcCcHHHHHHHHHHHHHhcCCCeEEEEee
Confidence            679998743321   456778889999999998754

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}

Probab=94.34  E-value=0.098  Score=45.91  Aligned_cols=92  Identities=22%  Similarity=0.282  Sum_probs=54.3

Q ss_pred             CCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecCh-------hHHHHHH---HcCCCeEEecCCCcccHHHHHHHHHHH
Q 017916          182 ETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDD-------YRLSVAK---ELGADNIVKVSTNLQDIAEEVEKIQKA  250 (364)
Q Consensus       182 g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~-------~~~~~~~---~lg~~~~~~~~~~~~~~~~~i~~~~~~  250 (364)
                      +.+|||+|+ |.+|...++.+...|.+ |++++++.       ++.+.++   ..++.. +..+-.  + .+.+.+..  
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~-V~~~~R~~~~~~~~~~~~~~~~~l~~~~v~~-v~~D~~--d-~~~l~~~~--   74 (307)
T 2gas_A            2 ENKILILGPTGAIGRHIVWASIKAGNP-TYALVRKTITAANPETKEELIDNYQSLGVIL-LEGDIN--D-HETLVKAI--   74 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHHTCC-EEEEECCSCCSSCHHHHHHHHHHHHHTTCEE-EECCTT--C-HHHHHHHH--
T ss_pred             CcEEEEECCCchHHHHHHHHHHhCCCc-EEEEECCCcccCChHHHHHHHHHHHhCCCEE-EEeCCC--C-HHHHHHHH--
Confidence            467999998 99999999888888985 55555654       4444333   335432 222221  2 12333332  


Q ss_pred             cCCCccEEEECCCCH--HHHHHHHHhcccC---CEEE
Q 017916          251 MGTGIDVSFDCAGFN--KTMSTALSATRAG---GKVC  282 (364)
Q Consensus       251 ~~~~~d~vid~~g~~--~~~~~~~~~l~~~---G~~v  282 (364)
                        .++|+||.+++..  .....+++.+...   .+++
T Consensus        75 --~~~d~vi~~a~~~~~~~~~~l~~aa~~~g~v~~~v  109 (307)
T 2gas_A           75 --KQVDIVICAAGRLLIEDQVKIIKAIKEAGNVKKFF  109 (307)
T ss_dssp             --TTCSEEEECSSSSCGGGHHHHHHHHHHHCCCSEEE
T ss_pred             --hCCCEEEECCcccccccHHHHHHHHHhcCCceEEe
Confidence              3699999998742  2233455555432   4666

>4fb5_A Probable oxidoreductase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, GFO/IDH/MOCA family; 2.61A {Rhizobium etli}

Probab=94.33  E-value=0.21  Score=45.52  Aligned_cols=132  Identities=14%  Similarity=0.069  Sum_probs=79.7

Q ss_pred             CEEEEEcCCHHHHHHHHHHHH--------CCCCEEEEEecChhHHH-HHHHcCCCeEEecCCCcccHHHHHHHHHHHcCC
Q 017916          183 TNVLIMGAGPIGLVTMLGARA--------FGAPRIVIVDVDDYRLS-VAKELGADNIVKVSTNLQDIAEEVEKIQKAMGT  253 (364)
Q Consensus       183 ~~VLI~Gag~~G~~ai~la~~--------~g~~~vv~~~~~~~~~~-~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~  253 (364)
                      =+|.|.|+|.+|..-+...+.        -+++.+.+++.+.++.+ +++++|...++.      ++.    ++..  ..
T Consensus        26 irvgiIG~G~ig~~H~~a~~~~~~~~~~~~~~~lvav~d~~~~~a~~~a~~~g~~~~y~------d~~----ell~--~~   93 (393)
T 4fb5_A           26 LGIGLIGTGYMGKCHALAWNAVKTVFGDVERPRLVHLAEANAGLAEARAGEFGFEKATA------DWR----ALIA--DP   93 (393)
T ss_dssp             CEEEEECCSHHHHHHHHHHTTHHHHHCSSCCCEEEEEECC--TTHHHHHHHHTCSEEES------CHH----HHHH--CT
T ss_pred             ccEEEEcCCHHHHHHHHHHHhhhhhhccCCCcEEEEEECCCHHHHHHHHHHhCCCeecC------CHH----HHhc--CC
Confidence            478999999998754433222        25556666677776654 567789875542      333    2322  45


Q ss_pred             CccEEEECCCCHHHHHHHHHhcccCCEEEEEcCCCCCccccchh----hhhcCcEEEee--ccCCCcHHHHHHHHHcCCC
Q 017916          254 GIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTP----AAVREVDVVGV--FRYKNTWPLCLELLRSGKI  327 (364)
Q Consensus       254 ~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~----~~~~~~~~~~~--~~~~~~~~~~~~~l~~g~~  327 (364)
                      .+|+|+-|+....+...+..+|+ .|+-|++.=+.....-....    .-.+++.+.-.  ..+...+..+-+++++|.+
T Consensus        94 ~iDaV~IatP~~~H~~~a~~al~-aGkhVl~EKPla~~~~ea~~l~~~a~~~g~~l~vg~~~R~~p~~~~~k~~i~~G~i  172 (393)
T 4fb5_A           94 EVDVVSVTTPNQFHAEMAIAALE-AGKHVWCEKPMAPAYADAERMLATAERSGKVAALGYNYIQNPVMRHIRKLVGDGVI  172 (393)
T ss_dssp             TCCEEEECSCGGGHHHHHHHHHH-TTCEEEECSCSCSSHHHHHHHHHHHHHSSSCEEECCGGGGCHHHHHHHHHHHTTTT
T ss_pred             CCcEEEECCChHHHHHHHHHHHh-cCCeEEEccCCcccHHHHHHhhhhHHhcCCccccccccccChHHHHHHHHHHcCCC
Confidence            79999999998888888888888 46667775322211111111    12233333222  2336678889999999887

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=94.32  E-value=0.26  Score=48.02  Aligned_cols=81  Identities=23%  Similarity=0.293  Sum_probs=50.7

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecCh---------hHHH----HHHHcCCCeEEecCCCcccHHHHHHH
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDD---------YRLS----VAKELGADNIVKVSTNLQDIAEEVEK  246 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~---------~~~~----~~~~lg~~~~~~~~~~~~~~~~~i~~  246 (364)
                      .|.++||+|+ +++|.+.++.+...|+ .|++++.+.         ++.+    .++..|...+.+..+. .+..+.++.
T Consensus         7 ~gkvalVTGas~GIG~a~A~~la~~Ga-~Vv~~~~~~~~~~~gr~~~~~~~~~~~i~~~g~~~~~d~~d~-~~~~~~v~~   84 (604)
T 2et6_A            7 KDKVVIITGAGGGLGKYYSLEFAKLGA-KVVVNDLGGALNGQGGNSKAADVVVDEIVKNGGVAVADYNNV-LDGDKIVET   84 (604)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEECC-----------CHHHHHHHHHHHTTCEEEEECCCT-TCHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHcCC-EEEEEeCCccccccccchHHHHHHHHHHHhcCCeEEEEcCCH-HHHHHHHHH
Confidence            4678899998 9999999999999999 566665432         2222    2233454444454332 344444444


Q ss_pred             HHHHcCCCccEEEECCCC
Q 017916          247 IQKAMGTGIDVSFDCAGF  264 (364)
Q Consensus       247 ~~~~~~~~~d~vid~~g~  264 (364)
                      ..+.. +++|++|+++|.
T Consensus        85 ~~~~~-G~iDiLVnNAGi  101 (604)
T 2et6_A           85 AVKNF-GTVHVIINNAGI  101 (604)
T ss_dssp             HHHHH-SCCCEEEECCCC
T ss_pred             HHHHc-CCCCEEEECCCC
Confidence            44333 479999999883

>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}

Probab=94.27  E-value=0.25  Score=40.64  Aligned_cols=98  Identities=18%  Similarity=0.260  Sum_probs=64.9

Q ss_pred             HHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHc----CCC---eEEecCCCcccHHHHHHHH
Q 017916          175 RRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKEL----GAD---NIVKVSTNLQDIAEEVEKI  247 (364)
Q Consensus       175 ~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~l----g~~---~~~~~~~~~~~~~~~i~~~  247 (364)
                      +....+++ +||-.|+|. |..+..+++..+. .+++++.+++..+.+++.    +..   .++..+.  .++.      
T Consensus        38 ~~~~~~~~-~vLdiG~G~-G~~~~~l~~~~~~-~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~d~--~~~~------  106 (219)
T 3dlc_A           38 NRFGITAG-TCIDIGSGP-GALSIALAKQSDF-SIRALDFSKHMNEIALKNIADANLNDRIQIVQGDV--HNIP------  106 (219)
T ss_dssp             HHHCCCEE-EEEEETCTT-SHHHHHHHHHSEE-EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECBT--TBCS------
T ss_pred             HhcCCCCC-EEEEECCCC-CHHHHHHHHcCCC-eEEEEECCHHHHHHHHHHHHhccccCceEEEEcCH--HHCC------
Confidence            45566666 888888755 6778888887665 799999998887776653    332   1222111  1100      


Q ss_pred             HHHcCCCccEEEECCC------CHHHHHHHHHhcccCCEEEEEc
Q 017916          248 QKAMGTGIDVSFDCAG------FNKTMSTALSATRAGGKVCLVG  285 (364)
Q Consensus       248 ~~~~~~~~d~vid~~g------~~~~~~~~~~~l~~~G~~v~~g  285 (364)
                        ...+.+|+|+....      ....+..+.+.|+|+|+++...
T Consensus       107 --~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~  148 (219)
T 3dlc_A          107 --IEDNYADLIVSRGSVFFWEDVATAFREIYRILKSGGKTYIGG  148 (219)
T ss_dssp             --SCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             --CCcccccEEEECchHhhccCHHHHHHHHHHhCCCCCEEEEEe
Confidence              01357999986432      1467889999999999998864

>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20

Probab=94.25  E-value=0.16  Score=43.04  Aligned_cols=99  Identities=14%  Similarity=0.197  Sum_probs=62.6

Q ss_pred             CCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHH----cCCCeEEecCCCcccHHHHHHHHHH--Hc
Q 017916          178 NIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKE----LGADNIVKVSTNLQDIAEEVEKIQK--AM  251 (364)
Q Consensus       178 ~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~i~~~~~--~~  251 (364)
                      .++++.+||=.|+|. |..++.+++......|++++.+++..+.+++    ++...+..+.   .+..    ++..  ..
T Consensus        67 ~~~~~~~vLDiG~G~-G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~---~d~~----~~~~~~~~  138 (240)
T 1xdz_A           67 DFNQVNTICDVGAGA-GFPSLPIKICFPHLHVTIVDSLNKRITFLEKLSEALQLENTTFCH---DRAE----TFGQRKDV  138 (240)
T ss_dssp             CGGGCCEEEEECSSS-CTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEE---SCHH----HHTTCTTT
T ss_pred             ccCCCCEEEEecCCC-CHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEe---ccHH----Hhcccccc
Confidence            346788999998753 5566677765544479999999988777654    4554322211   2222    1210  01


Q ss_pred             CCCccEEEE-CCCC-HHHHHHHHHhcccCCEEEEE
Q 017916          252 GTGIDVSFD-CAGF-NKTMSTALSATRAGGKVCLV  284 (364)
Q Consensus       252 ~~~~d~vid-~~g~-~~~~~~~~~~l~~~G~~v~~  284 (364)
                      ...+|+|+. .+.. ...+..+.+.|+++|+++.+
T Consensus       139 ~~~fD~V~~~~~~~~~~~l~~~~~~LkpgG~l~~~  173 (240)
T 1xdz_A          139 RESYDIVTARAVARLSVLSELCLPLVKKNGLFVAL  173 (240)
T ss_dssp             TTCEEEEEEECCSCHHHHHHHHGGGEEEEEEEEEE
T ss_pred             cCCccEEEEeccCCHHHHHHHHHHhcCCCCEEEEE
Confidence            357999985 3333 35666778999999999876

>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}

Probab=94.23  E-value=0.46  Score=43.53  Aligned_cols=99  Identities=19%  Similarity=0.116  Sum_probs=62.7

Q ss_pred             CCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHH----cCCCeEEecCCCcccHHHHHHHHHHHcCCC
Q 017916          179 IGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKE----LGADNIVKVSTNLQDIAEEVEKIQKAMGTG  254 (364)
Q Consensus       179 ~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~  254 (364)
                      +++|++||=.|+|. |..++.+|+ .|++ |++++.++...+.+++    .|...-+.    ..|..+.+...    .+.
T Consensus       212 ~~~g~~VLDlg~Gt-G~~sl~~a~-~ga~-V~avDis~~al~~a~~n~~~ng~~~~~~----~~D~~~~l~~~----~~~  280 (393)
T 4dmg_A          212 VRPGERVLDVYSYV-GGFALRAAR-KGAY-ALAVDKDLEALGVLDQAALRLGLRVDIR----HGEALPTLRGL----EGP  280 (393)
T ss_dssp             CCTTCEEEEESCTT-THHHHHHHH-TTCE-EEEEESCHHHHHHHHHHHHHHTCCCEEE----ESCHHHHHHTC----CCC
T ss_pred             hcCCCeEEEcccch-hHHHHHHHH-cCCe-EEEEECCHHHHHHHHHHHHHhCCCCcEE----EccHHHHHHHh----cCC
Confidence            45799999887643 445555555 3885 9999999988877654    35442121    13433332221    234


Q ss_pred             ccEEEECCCC---------------HHHHHHHHHhcccCCEEEEEcCCC
Q 017916          255 IDVSFDCAGF---------------NKTMSTALSATRAGGKVCLVGMGH  288 (364)
Q Consensus       255 ~d~vid~~g~---------------~~~~~~~~~~l~~~G~~v~~g~~~  288 (364)
                      +|+|+-....               .+.+..+.+.|+|+|.++.+..+.
T Consensus       281 fD~Ii~dpP~f~~~~~~~~~~~~~~~~ll~~a~~~LkpGG~Lv~~s~s~  329 (393)
T 4dmg_A          281 FHHVLLDPPTLVKRPEELPAMKRHLVDLVREALRLLAEEGFLWLSSCSY  329 (393)
T ss_dssp             EEEEEECCCCCCSSGGGHHHHHHHHHHHHHHHHHTEEEEEEEEEEECCT
T ss_pred             CCEEEECCCcCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCC
Confidence            9998853221               256777899999999998775443

>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}

Probab=94.20  E-value=0.54  Score=37.67  Aligned_cols=93  Identities=16%  Similarity=0.185  Sum_probs=62.0

Q ss_pred             CCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCC-CeEEecCCCcccHHHHHHHHHHHcCCCccE
Q 017916          179 IGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGA-DNIVKVSTNLQDIAEEVEKIQKAMGTGIDV  257 (364)
Q Consensus       179 ~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~  257 (364)
                      ++++.+||-.|+|. |..+..+++. +. .+++++.+++..+.+++... ..++..+....+          ...+.+|+
T Consensus        44 ~~~~~~vLdiG~G~-G~~~~~l~~~-~~-~v~~~D~~~~~~~~a~~~~~~~~~~~~d~~~~~----------~~~~~~D~  110 (195)
T 3cgg_A           44 APRGAKILDAGCGQ-GRIGGYLSKQ-GH-DVLGTDLDPILIDYAKQDFPEARWVVGDLSVDQ----------ISETDFDL  110 (195)
T ss_dssp             SCTTCEEEEETCTT-THHHHHHHHT-TC-EEEEEESCHHHHHHHHHHCTTSEEEECCTTTSC----------CCCCCEEE
T ss_pred             ccCCCeEEEECCCC-CHHHHHHHHC-CC-cEEEEcCCHHHHHHHHHhCCCCcEEEcccccCC----------CCCCceeE
Confidence            57889999998754 6667777766 66 79999999988888876432 222221111100          01357999


Q ss_pred             EEECCCC---------HHHHHHHHHhcccCCEEEEE
Q 017916          258 SFDCAGF---------NKTMSTALSATRAGGKVCLV  284 (364)
Q Consensus       258 vid~~g~---------~~~~~~~~~~l~~~G~~v~~  284 (364)
                      |+.....         ...+..+.+.|+++|.++..
T Consensus       111 i~~~~~~~~~~~~~~~~~~l~~~~~~l~~~G~l~~~  146 (195)
T 3cgg_A          111 IVSAGNVMGFLAEDGREPALANIHRALGADGRAVIG  146 (195)
T ss_dssp             EEECCCCGGGSCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             EEECCcHHhhcChHHHHHHHHHHHHHhCCCCEEEEE
Confidence            9964110         35677888999999998875

>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=94.19  E-value=0.13  Score=45.79  Aligned_cols=81  Identities=16%  Similarity=0.039  Sum_probs=45.1

Q ss_pred             CCCCCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhH--HHHHHHcC--C-CeEEecCCCcccHHHHHHHHHHHc
Q 017916          178 NIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYR--LSVAKELG--A-DNIVKVSTNLQDIAEEVEKIQKAM  251 (364)
Q Consensus       178 ~~~~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~--~~~~~~lg--~-~~~~~~~~~~~~~~~~i~~~~~~~  251 (364)
                      ..+++.+|||+|+ |.+|...++.+...|. .|++++++..+  ...++.+.  . ...+..+-.  + .+.+.++..  
T Consensus        10 ~~~~~~~vlVTGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~--d-~~~~~~~~~--   83 (335)
T 1rpn_A           10 HGSMTRSALVTGITGQDGAYLAKLLLEKGY-RVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMA--D-ACSVQRAVI--   83 (335)
T ss_dssp             -----CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCCSSCCCHHHHHTTCGGGEEEEECCTT--C-HHHHHHHHH--
T ss_pred             ccccCCeEEEECCCChHHHHHHHHHHHCCC-eEEEEeCCCccccccchhhccccCceEEEECCCC--C-HHHHHHHHH--
Confidence            3468899999998 9999999999888898 56666665432  12233331  1 112222211  1 122333322  


Q ss_pred             CCCccEEEECCCC
Q 017916          252 GTGIDVSFDCAGF  264 (364)
Q Consensus       252 ~~~~d~vid~~g~  264 (364)
                      +.++|+||.+++.
T Consensus        84 ~~~~d~Vih~A~~   96 (335)
T 1rpn_A           84 KAQPQEVYNLAAQ   96 (335)
T ss_dssp             HHCCSEEEECCSC
T ss_pred             HcCCCEEEECccc
Confidence            1258999999873

>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}

Probab=94.18  E-value=0.15  Score=48.81  Aligned_cols=83  Identities=16%  Similarity=0.172  Sum_probs=51.3

Q ss_pred             CCCCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEE-ecCh-------------h----HHHHHHHcCCCe-EEecCCCcc
Q 017916          179 IGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIV-DVDD-------------Y----RLSVAKELGADN-IVKVSTNLQ  238 (364)
Q Consensus       179 ~~~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~-~~~~-------------~----~~~~~~~lg~~~-~~~~~~~~~  238 (364)
                      ++++.++||+|+ |++|...++.+...|+++++.+ .++.             +    ..+.++..|... ++..|-.+ 
T Consensus       248 ~~~~~~vLITGgsgGIG~~lA~~La~~G~~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvtd-  326 (525)
T 3qp9_A          248 WQADGTVLVTGAEEPAAAEAARRLARDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELADLGATATVVTCDLTD-  326 (525)
T ss_dssp             SCTTSEEEESSTTSHHHHHHHHHHHHHTCCEEEEEECCCC---------------CHHHHHHHHHHTCEEEEEECCTTS-
T ss_pred             ecCCCEEEEECCCCcHHHHHHHHHHHcCCCEEEEEeCCCCCCccccccccccCHHHHHHHHHHHhcCCEEEEEECCCCC-
Confidence            467889999987 9999999988888899767776 6652             1    122334456532 22222221 


Q ss_pred             cHHHHHHHHHHH--cCCCccEEEECCCC
Q 017916          239 DIAEEVEKIQKA--MGTGIDVSFDCAGF  264 (364)
Q Consensus       239 ~~~~~i~~~~~~--~~~~~d~vid~~g~  264 (364)
                        .+.++++...  ..+++|.+|.++|.
T Consensus       327 --~~~v~~~~~~i~~~g~id~vVh~AGv  352 (525)
T 3qp9_A          327 --AEAAARLLAGVSDAHPLSAVLHLPPT  352 (525)
T ss_dssp             --HHHHHHHHHTSCTTSCEEEEEECCCC
T ss_pred             --HHHHHHHHHHHHhcCCCcEEEECCcC
Confidence              2233333321  13479999999884

>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A

Probab=94.15  E-value=0.16  Score=43.40  Aligned_cols=95  Identities=19%  Similarity=0.253  Sum_probs=63.7

Q ss_pred             cCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcC---CC--eEEecCCCcccHHHHHHHHHHHc
Q 017916          177 ANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELG---AD--NIVKVSTNLQDIAEEVEKIQKAM  251 (364)
Q Consensus       177 ~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg---~~--~~~~~~~~~~~~~~~i~~~~~~~  251 (364)
                      ..++++.+||-.|+|. |..+..+++. +. .+++++.+++..+.+++.-   ..  .++.-+.  .++.        ..
T Consensus        35 ~~~~~~~~vLDiG~G~-G~~~~~l~~~-~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~--~~~~--------~~  101 (263)
T 2yqz_A           35 HPKGEEPVFLELGVGT-GRIALPLIAR-GY-RYIALDADAAMLEVFRQKIAGVDRKVQVVQADA--RAIP--------LP  101 (263)
T ss_dssp             CCSSSCCEEEEETCTT-STTHHHHHTT-TC-EEEEEESCHHHHHHHHHHTTTSCTTEEEEESCT--TSCC--------SC
T ss_pred             cCCCCCCEEEEeCCcC-CHHHHHHHHC-CC-EEEEEECCHHHHHHHHHHhhccCCceEEEEccc--ccCC--------CC
Confidence            3578899999998755 6667777765 66 7999999998888877641   11  1121111  1110        01


Q ss_pred             CCCccEEEECCC------CHHHHHHHHHhcccCCEEEEE
Q 017916          252 GTGIDVSFDCAG------FNKTMSTALSATRAGGKVCLV  284 (364)
Q Consensus       252 ~~~~d~vid~~g------~~~~~~~~~~~l~~~G~~v~~  284 (364)
                      .+.+|+|+....      ....+..+.+.|+|+|.++..
T Consensus       102 ~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~  140 (263)
T 2yqz_A          102 DESVHGVIVVHLWHLVPDWPKVLAEAIRVLKPGGALLEG  140 (263)
T ss_dssp             TTCEEEEEEESCGGGCTTHHHHHHHHHHHEEEEEEEEEE
T ss_pred             CCCeeEEEECCchhhcCCHHHHHHHHHHHCCCCcEEEEE
Confidence            356999987432      246778899999999998876

>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*

Probab=94.13  E-value=0.42  Score=39.82  Aligned_cols=98  Identities=15%  Similarity=0.103  Sum_probs=64.1

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHH----HcCCCeEEecCCCcccHHHHHHHHHHHcCCCcc
Q 017916          181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAK----ELGADNIVKVSTNLQDIAEEVEKIQKAMGTGID  256 (364)
Q Consensus       181 ~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~----~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d  256 (364)
                      ++.+||=.|+|. |..++.+|+......|++++.+++..+.++    ..+...+..+.   .|..+.+....  ..+.+|
T Consensus        34 ~~~~vLDiGcG~-G~~~~~lA~~~p~~~v~giD~s~~~l~~a~~~~~~~~l~nv~~~~---~Da~~~l~~~~--~~~~~d  107 (218)
T 3dxy_A           34 EAPVTLEIGFGM-GASLVAMAKDRPEQDFLGIEVHSPGVGACLASAHEEGLSNLRVMC---HDAVEVLHKMI--PDNSLR  107 (218)
T ss_dssp             CCCEEEEESCTT-CHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHTTCSSEEEEC---SCHHHHHHHHS--CTTCEE
T ss_pred             CCCeEEEEeeeC-hHHHHHHHHHCCCCeEEEEEecHHHHHHHHHHHHHhCCCcEEEEE---CCHHHHHHHHc--CCCChh
Confidence            567888888755 778888888875558999999998776654    34555432222   23333222211  145688


Q ss_pred             EEEECCCC--------------HHHHHHHHHhcccCCEEEEE
Q 017916          257 VSFDCAGF--------------NKTMSTALSATRAGGKVCLV  284 (364)
Q Consensus       257 ~vid~~g~--------------~~~~~~~~~~l~~~G~~v~~  284 (364)
                      .|+-....              +..+..+.+.|+|||.++..
T Consensus       108 ~v~~~~~~p~~~~~~~~rr~~~~~~l~~~~r~LkpGG~l~i~  149 (218)
T 3dxy_A          108 MVQLFFPDPWHKARHNKRRIVQVPFAELVKSKLQLGGVFHMA  149 (218)
T ss_dssp             EEEEESCCCCCSGGGGGGSSCSHHHHHHHHHHEEEEEEEEEE
T ss_pred             eEEEeCCCCccchhhhhhhhhhHHHHHHHHHHcCCCcEEEEE
Confidence            88754221              24788999999999998875

>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}

Probab=94.06  E-value=0.16  Score=45.29  Aligned_cols=132  Identities=17%  Similarity=0.041  Sum_probs=78.9

Q ss_pred             CEEEEEcCCHHHHHHHHHHHHC-CCCEEEEEecChhHHH-HHHHcCCCeEEecCCCcccHHHHHHHHHHHcCCCccEEEE
Q 017916          183 TNVLIMGAGPIGLVTMLGARAF-GAPRIVIVDVDDYRLS-VAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  260 (364)
Q Consensus       183 ~~VLI~Gag~~G~~ai~la~~~-g~~~vv~~~~~~~~~~-~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid  260 (364)
                      -+|.|.|.|.+|...+..++.. +++.+.+.+.+.++.+ +++++|....  |    .++.    ++..  ...+|+|+.
T Consensus         6 ~~igiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~~~~~~~--~----~~~~----~ll~--~~~~D~V~i   73 (330)
T 3e9m_A            6 IRYGIMSTAQIVPRFVAGLRESAQAEVRGIASRRLENAQKMAKELAIPVA--Y----GSYE----ELCK--DETIDIIYI   73 (330)
T ss_dssp             EEEEECSCCTTHHHHHHHHHHSSSEEEEEEBCSSSHHHHHHHHHTTCCCC--B----SSHH----HHHH--CTTCSEEEE
T ss_pred             EEEEEECchHHHHHHHHHHHhCCCcEEEEEEeCCHHHHHHHHHHcCCCce--e----CCHH----HHhc--CCCCCEEEE
Confidence            3688899998898777777664 5644445666666654 4566776422  1    2322    2322  357999999


Q ss_pred             CCCCHHHHHHHHHhcccCCEEEEEcCCCCCccccch---h-hhhcCcEEEee--ccCCCcHHHHHHHHHcCCC
Q 017916          261 CAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLT---P-AAVREVDVVGV--FRYKNTWPLCLELLRSGKI  327 (364)
Q Consensus       261 ~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~---~-~~~~~~~~~~~--~~~~~~~~~~~~~l~~g~~  327 (364)
                      |+....+...+..+|..+ +-+.+.-+.....-...   . .-.+++.+.-.  ..+...+..+.+++++|.+
T Consensus        74 ~tp~~~h~~~~~~al~~g-k~vl~EKP~~~~~~e~~~l~~~a~~~g~~~~v~~~~r~~p~~~~~k~~i~~g~i  145 (330)
T 3e9m_A           74 PTYNQGHYSAAKLALSQG-KPVLLEKPFTLNAAEAEELFAIAQEQGVFLMEAQKSVFLPITQKVKATIQEGGL  145 (330)
T ss_dssp             CCCGGGHHHHHHHHHHTT-CCEEECSSCCSSHHHHHHHHHHHHHTTCCEEECCSGGGCHHHHHHHHHHHTTTT
T ss_pred             cCCCHHHHHHHHHHHHCC-CeEEEeCCCCCCHHHHHHHHHHHHHcCCeEEEEEhhhhCHHHHHHHHHHhCCCC
Confidence            999877888888888865 44555432211111111   1 12233333322  2336678889999999887

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*

Probab=94.05  E-value=0.16  Score=45.46  Aligned_cols=95  Identities=26%  Similarity=0.250  Sum_probs=55.7

Q ss_pred             CCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecCh----hHHHHHHH---cCCCeEEecCCCcccHHHHHHHHHHHcCC
Q 017916          182 ETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDD----YRLSVAKE---LGADNIVKVSTNLQDIAEEVEKIQKAMGT  253 (364)
Q Consensus       182 g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~----~~~~~~~~---lg~~~~~~~~~~~~~~~~~i~~~~~~~~~  253 (364)
                      ..+|||+|+ |.+|...++.+...|.+ |++++++.    ++...++.   .++.. +..+-  .+ .+.+.+...  ..
T Consensus        10 ~~~IlVtGatG~iG~~l~~~L~~~g~~-V~~l~R~~~~~~~~~~~~~~l~~~~v~~-~~~Dl--~d-~~~l~~~~~--~~   82 (346)
T 3i6i_A           10 KGRVLIAGATGFIGQFVATASLDAHRP-TYILARPGPRSPSKAKIFKALEDKGAII-VYGLI--NE-QEAMEKILK--EH   82 (346)
T ss_dssp             -CCEEEECTTSHHHHHHHHHHHHTTCC-EEEEECSSCCCHHHHHHHHHHHHTTCEE-EECCT--TC-HHHHHHHHH--HT
T ss_pred             CCeEEEECCCcHHHHHHHHHHHHCCCC-EEEEECCCCCChhHHHHHHHHHhCCcEE-EEeec--CC-HHHHHHHHh--hC
Confidence            358999998 99999999999888985 55665544    44443333   34433 22221  12 223333332  13


Q ss_pred             CccEEEECCCCH--HHHHHHHHhcccCC---EEEE
Q 017916          254 GIDVSFDCAGFN--KTMSTALSATRAGG---KVCL  283 (364)
Q Consensus       254 ~~d~vid~~g~~--~~~~~~~~~l~~~G---~~v~  283 (364)
                      ++|+||.+++..  .....+++.+...|   +++.
T Consensus        83 ~~d~Vi~~a~~~n~~~~~~l~~aa~~~g~v~~~v~  117 (346)
T 3i6i_A           83 EIDIVVSTVGGESILDQIALVKAMKAVGTIKRFLP  117 (346)
T ss_dssp             TCCEEEECCCGGGGGGHHHHHHHHHHHCCCSEEEC
T ss_pred             CCCEEEECCchhhHHHHHHHHHHHHHcCCceEEee
Confidence            799999998842  22334555555444   5653

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A

Probab=94.04  E-value=0.19  Score=44.69  Aligned_cols=42  Identities=17%  Similarity=0.123  Sum_probs=33.3

Q ss_pred             CCCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHH
Q 017916          180 GPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA  222 (364)
Q Consensus       180 ~~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~  222 (364)
                      .++.+|||+|+ |.+|...+..+...|+ .|++++++..+.+.+
T Consensus         9 ~~~~~vlVTGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~   51 (342)
T 1y1p_A            9 PEGSLVLVTGANGFVASHVVEQLLEHGY-KVRGTARSASKLANL   51 (342)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHH
T ss_pred             CCCCEEEEECCccHHHHHHHHHHHHCCC-EEEEEeCCcccHHHH
Confidence            45789999998 9999999998888898 577777776655433

>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A

Probab=94.04  E-value=0.073  Score=45.97  Aligned_cols=92  Identities=14%  Similarity=0.039  Sum_probs=59.8

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHc-CC-------CeEEecCCCcccHHHHHHHHHHHc
Q 017916          180 GPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKEL-GA-------DNIVKVSTNLQDIAEEVEKIQKAM  251 (364)
Q Consensus       180 ~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~l-g~-------~~~~~~~~~~~~~~~~i~~~~~~~  251 (364)
                      ..+.+||+.|+|. |..+..+++. + ..+.+++.+++-.+.+++. ..       ..+........++          .
T Consensus        71 ~~~~~VL~iG~G~-G~~~~~ll~~-~-~~v~~veid~~~i~~ar~~~~~~~~~~~~~rv~~~~~D~~~~----------~  137 (262)
T 2cmg_A           71 KELKEVLIVDGFD-LELAHQLFKY-D-THIDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQLLDLD----------I  137 (262)
T ss_dssp             SCCCEEEEESSCC-HHHHHHHTTS-S-CEEEEECSCHHHHGGGTTTSTTHHHHHTCTTEEEESSGGGSC----------C
T ss_pred             CCCCEEEEEeCCc-CHHHHHHHhC-C-CEEEEEECCHHHHHHHHHHHHhhccccCCCeEEEEechHHHH----------H
Confidence            4568999999765 6677778877 7 6899999988777766542 11       1111111110010          0


Q ss_pred             CCCccEEEECCCCH-HHHHHHHHhcccCCEEEEEc
Q 017916          252 GTGIDVSFDCAGFN-KTMSTALSATRAGGKVCLVG  285 (364)
Q Consensus       252 ~~~~d~vid~~g~~-~~~~~~~~~l~~~G~~v~~g  285 (364)
                       +.+|+|+-....+ ..+..+.+.|+|+|.++...
T Consensus       138 -~~fD~Ii~d~~dp~~~~~~~~~~L~pgG~lv~~~  171 (262)
T 2cmg_A          138 -KKYDLIFCLQEPDIHRIDGLKRMLKEDGVFISVA  171 (262)
T ss_dssp             -CCEEEEEESSCCCHHHHHHHHTTEEEEEEEEEEE
T ss_pred             -hhCCEEEECCCChHHHHHHHHHhcCCCcEEEEEc
Confidence             4699998544333 34788999999999998753

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=94.01  E-value=0.24  Score=41.64  Aligned_cols=73  Identities=22%  Similarity=0.363  Sum_probs=45.2

Q ss_pred             CCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCC-cccHHHHHHHHHHHcCCCccEEE
Q 017916          182 ETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTN-LQDIAEEVEKIQKAMGTGIDVSF  259 (364)
Q Consensus       182 g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~-~~~~~~~i~~~~~~~~~~~d~vi  259 (364)
                      +.++||+|+ |.+|.+.++.+...|+ .|++++++.+    .+++   ..+..+-. .+++.+.++++ .. ..++|++|
T Consensus         2 ~k~vlVtGasggiG~~la~~l~~~G~-~V~~~~r~~~----~~~~---~~~~~D~~~~~~~~~~~~~~-~~-~~~~d~li   71 (242)
T 1uay_A            2 ERSALVTGGASGLGRAAALALKARGY-RVVVLDLRRE----GEDL---IYVEGDVTREEDVRRAVARA-QE-EAPLFAVV   71 (242)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTC-EEEEEESSCC----SSSS---EEEECCTTCHHHHHHHHHHH-HH-HSCEEEEE
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEccCcc----ccce---EEEeCCCCCHHHHHHHHHHH-Hh-hCCceEEE
Confidence            568999998 9999999988888899 5666666543    1111   22222222 23333334333 22 24799999


Q ss_pred             ECCCC
Q 017916          260 DCAGF  264 (364)
Q Consensus       260 d~~g~  264 (364)
                      +++|.
T Consensus        72 ~~ag~   76 (242)
T 1uay_A           72 SAAGV   76 (242)
T ss_dssp             ECCCC
T ss_pred             Ecccc
Confidence            98873

>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A

Probab=93.99  E-value=0.17  Score=45.21  Aligned_cols=89  Identities=16%  Similarity=0.166  Sum_probs=59.9

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcCCCccEEEE
Q 017916          181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  260 (364)
Q Consensus       181 ~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid  260 (364)
                      .|.+|.|.|.|.+|...++.++.+|.+ |++.+.+.++.+...++|....        ++.+.+        ...|+|+.
T Consensus       154 ~g~~vgIIG~G~iG~~iA~~l~~~G~~-V~~~d~~~~~~~~~~~~g~~~~--------~l~e~l--------~~aDvVi~  216 (330)
T 2gcg_A          154 TQSTVGIIGLGRIGQAIARRLKPFGVQ-RFLYTGRQPRPEEAAEFQAEFV--------STPELA--------AQSDFIVV  216 (330)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHGGGTCC-EEEEESSSCCHHHHHTTTCEEC--------CHHHHH--------HHCSEEEE
T ss_pred             CCCEEEEECcCHHHHHHHHHHHHCCCE-EEEECCCCcchhHHHhcCceeC--------CHHHHH--------hhCCEEEE
Confidence            467999999999999999999999994 7777776655555555554321        222211        24689988


Q ss_pred             CCCCHH----HH-HHHHHhcccCCEEEEEcC
Q 017916          261 CAGFNK----TM-STALSATRAGGKVCLVGM  286 (364)
Q Consensus       261 ~~g~~~----~~-~~~~~~l~~~G~~v~~g~  286 (364)
                      ++....    .+ ...+..|+++..++..+.
T Consensus       217 ~vp~~~~t~~~i~~~~~~~mk~gailIn~sr  247 (330)
T 2gcg_A          217 ACSLTPATEGLCNKDFFQKMKETAVFINISR  247 (330)
T ss_dssp             CCCCCTTTTTCBSHHHHHHSCTTCEEEECSC
T ss_pred             eCCCChHHHHhhCHHHHhcCCCCcEEEECCC
Confidence            876321    12 345677888887776653

>4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A*

Probab=93.96  E-value=0.4  Score=44.30  Aligned_cols=86  Identities=17%  Similarity=0.072  Sum_probs=49.8

Q ss_pred             cCCCCCCEEEEEcC-CHHHHH--HHHHHHHCCCCEEEEEecChh---------------H-HHHHHHcCCCe-EEecCCC
Q 017916          177 ANIGPETNVLIMGA-GPIGLV--TMLGARAFGAPRIVIVDVDDY---------------R-LSVAKELGADN-IVKVSTN  236 (364)
Q Consensus       177 ~~~~~g~~VLI~Ga-g~~G~~--ai~la~~~g~~~vv~~~~~~~---------------~-~~~~~~lg~~~-~~~~~~~  236 (364)
                      .....|.++||+|+ +++|.+  .+......|+ .|+.+..+..               . .+.+++.|... .+..+-.
T Consensus        55 ~~~~~gK~aLVTGassGIG~A~aia~ala~~Ga-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvt  133 (418)
T 4eue_A           55 IGFRGPKKVLIVGASSGFGLATRISVAFGGPEA-HTIGVSYETGATDRRIGTAGWYNNIFFKEFAKKKGLVAKNFIEDAF  133 (418)
T ss_dssp             CCCCCCSEEEEESCSSHHHHHHHHHHHHSSSCC-EEEEEECCCCCCSSCCCCHHHHHHHHHHHHHHHTTCCEEEEESCTT
T ss_pred             CcCCCCCEEEEECCCcHHHHHHHHHHHHHhCCC-EEEEEecCcchhhhcccccccchHHHHHHHHHHcCCcEEEEEeeCC
Confidence            44577889999998 999998  4443344599 5666654321               1 22344556432 2222322


Q ss_pred             -cccHHHHHHHHHHHcCCCccEEEECCCC
Q 017916          237 -LQDIAEEVEKIQKAMGTGIDVSFDCAGF  264 (364)
Q Consensus       237 -~~~~~~~i~~~~~~~~~~~d~vid~~g~  264 (364)
                       .++..+.++.+.+. -+++|++++++|.
T Consensus       134 d~~~v~~~v~~i~~~-~G~IDiLVnNAG~  161 (418)
T 4eue_A          134 SNETKDKVIKYIKDE-FGKIDLFVYSLAA  161 (418)
T ss_dssp             CHHHHHHHHHHHHHT-TCCEEEEEECCCC
T ss_pred             CHHHHHHHHHHHHHH-cCCCCEEEECCcc
Confidence             23344444444433 3579999999885

>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}

Probab=93.94  E-value=0.3  Score=41.45  Aligned_cols=98  Identities=17%  Similarity=0.230  Sum_probs=64.4

Q ss_pred             cCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCC-CeEEecCCCcccHHHHHHHHHHHcCCCc
Q 017916          177 ANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGA-DNIVKVSTNLQDIAEEVEKIQKAMGTGI  255 (364)
Q Consensus       177 ~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~  255 (364)
                      ....++.+||-.|+|. |..+..+++. |...+++++.+++..+.+++... ..+.....   ++.+    + ....+.+
T Consensus        40 ~~~~~~~~vLD~GcG~-G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~---d~~~----~-~~~~~~f  109 (253)
T 3g5l_A           40 LPDFNQKTVLDLGCGF-GWHCIYAAEH-GAKKVLGIDLSERMLTEAKRKTTSPVVCYEQK---AIED----I-AIEPDAY  109 (253)
T ss_dssp             CCCCTTCEEEEETCTT-CHHHHHHHHT-TCSEEEEEESCHHHHHHHHHHCCCTTEEEEEC---CGGG----C-CCCTTCE
T ss_pred             hhccCCCEEEEECCCC-CHHHHHHHHc-CCCEEEEEECCHHHHHHHHHhhccCCeEEEEc---chhh----C-CCCCCCe
Confidence            4556889999998755 6677777776 55589999999988888876432 11111101   1110    0 0013579


Q ss_pred             cEEEECCC------CHHHHHHHHHhcccCCEEEEE
Q 017916          256 DVSFDCAG------FNKTMSTALSATRAGGKVCLV  284 (364)
Q Consensus       256 d~vid~~g------~~~~~~~~~~~l~~~G~~v~~  284 (364)
                      |+|+....      -...+..+.+.|+|+|+++..
T Consensus       110 D~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~  144 (253)
T 3g5l_A          110 NVVLSSLALHYIASFDDICKKVYINLKSSGSFIFS  144 (253)
T ss_dssp             EEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEE
T ss_pred             EEEEEchhhhhhhhHHHHHHHHHHHcCCCcEEEEE
Confidence            99986432      146778899999999999875

>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1

Probab=93.94  E-value=0.17  Score=45.02  Aligned_cols=89  Identities=16%  Similarity=0.082  Sum_probs=62.0

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEec-ChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcCCCccEEE
Q 017916          181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDV-DDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF  259 (364)
Q Consensus       181 ~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~-~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vi  259 (364)
                      .|.+|.|.|.|.+|...++.++.+|+ .|++.++ +.++ +...++|+..   .    .++.+    +.    ...|+|+
T Consensus       145 ~g~~vgIIG~G~IG~~~A~~l~~~G~-~V~~~d~~~~~~-~~~~~~g~~~---~----~~l~e----ll----~~aDvVi  207 (320)
T 1gdh_A          145 DNKTLGIYGFGSIGQALAKRAQGFDM-DIDYFDTHRASS-SDEASYQATF---H----DSLDS----LL----SVSQFFS  207 (320)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHTTTC-EEEEECSSCCCH-HHHHHHTCEE---C----SSHHH----HH----HHCSEEE
T ss_pred             CCCEEEEECcCHHHHHHHHHHHHCCC-EEEEECCCCcCh-hhhhhcCcEE---c----CCHHH----HH----hhCCEEE
Confidence            57899999999999999999999998 6888887 6655 3455677632   1    12222    21    2468998


Q ss_pred             ECCCCHH----HH-HHHHHhcccCCEEEEEcC
Q 017916          260 DCAGFNK----TM-STALSATRAGGKVCLVGM  286 (364)
Q Consensus       260 d~~g~~~----~~-~~~~~~l~~~G~~v~~g~  286 (364)
                      .++...+    .+ ...+..|+++..++.++.
T Consensus       208 l~~p~~~~t~~~i~~~~l~~mk~gailIn~ar  239 (320)
T 1gdh_A          208 LNAPSTPETRYFFNKATIKSLPQGAIVVNTAR  239 (320)
T ss_dssp             ECCCCCTTTTTCBSHHHHTTSCTTEEEEECSC
T ss_pred             EeccCchHHHhhcCHHHHhhCCCCcEEEECCC
Confidence            8776321    12 346678888888888764

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A

Probab=93.94  E-value=0.14  Score=44.03  Aligned_cols=81  Identities=20%  Similarity=0.239  Sum_probs=47.6

Q ss_pred             CCCEEEEEcC---CHHHHHHHHHHHHCCCCEEEEEecChhH--HHHHH----HcCCCe-EEecCC-CcccHHHHHHHHHH
Q 017916          181 PETNVLIMGA---GPIGLVTMLGARAFGAPRIVIVDVDDYR--LSVAK----ELGADN-IVKVST-NLQDIAEEVEKIQK  249 (364)
Q Consensus       181 ~g~~VLI~Ga---g~~G~~ai~la~~~g~~~vv~~~~~~~~--~~~~~----~lg~~~-~~~~~~-~~~~~~~~i~~~~~  249 (364)
                      .+.++||+|+   +++|.+.++.+...|+ .|+.+.++.++  .+.++    ..+... .+..|- ..+++.+.++.+.+
T Consensus        19 ~~k~vlITGas~~~giG~~~a~~l~~~G~-~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   97 (267)
T 3gdg_A           19 KGKVVVVTGASGPKGMGIEAARGCAEMGA-AVAITYASRAQGAEENVKELEKTYGIKAKAYKCQVDSYESCEKLVKDVVA   97 (267)
T ss_dssp             TTCEEEETTCCSSSSHHHHHHHHHHHTSC-EEEECBSSSSSHHHHHHHHHHHHHCCCEECCBCCTTCHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCCCChHHHHHHHHHHCCC-eEEEEeCCcchhHHHHHHHHHHhcCCceeEEecCCCCHHHHHHHHHHHHH
Confidence            4689999985   4899999998888999 45555444322  22222    334322 111121 22334444444433


Q ss_pred             HcCCCccEEEECCC
Q 017916          250 AMGTGIDVSFDCAG  263 (364)
Q Consensus       250 ~~~~~~d~vid~~g  263 (364)
                      . -+++|++|+++|
T Consensus        98 ~-~g~id~li~nAg  110 (267)
T 3gdg_A           98 D-FGQIDAFIANAG  110 (267)
T ss_dssp             H-TSCCSEEEECCC
T ss_pred             H-cCCCCEEEECCC
Confidence            3 357999999987

>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}

Probab=93.92  E-value=0.11  Score=44.70  Aligned_cols=94  Identities=16%  Similarity=0.162  Sum_probs=60.7

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcCCCccEEE
Q 017916          180 GPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF  259 (364)
Q Consensus       180 ~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vi  259 (364)
                      ..+.+||=.|+|. |..+..+++. +. .|++++.+++..+.+++..-.....-+.  +++        ....+.+|+|+
T Consensus        38 ~~~~~vLDvGcGt-G~~~~~l~~~-~~-~v~gvD~s~~ml~~a~~~~~v~~~~~~~--e~~--------~~~~~sfD~v~  104 (257)
T 4hg2_A           38 PARGDALDCGCGS-GQASLGLAEF-FE-RVHAVDPGEAQIRQALRHPRVTYAVAPA--EDT--------GLPPASVDVAI  104 (257)
T ss_dssp             SCSSEEEEESCTT-TTTHHHHHTT-CS-EEEEEESCHHHHHTCCCCTTEEEEECCT--TCC--------CCCSSCEEEEE
T ss_pred             CCCCCEEEEcCCC-CHHHHHHHHh-CC-EEEEEeCcHHhhhhhhhcCCceeehhhh--hhh--------cccCCcccEEE
Confidence            3457888888764 7777777754 55 7999999988776655432111221111  111        00135799998


Q ss_pred             ECCC-----CHHHHHHHHHhcccCCEEEEEcC
Q 017916          260 DCAG-----FNKTMSTALSATRAGGKVCLVGM  286 (364)
Q Consensus       260 d~~g-----~~~~~~~~~~~l~~~G~~v~~g~  286 (364)
                      .+..     ....+.++.+.|+|||+++.+..
T Consensus       105 ~~~~~h~~~~~~~~~e~~rvLkpgG~l~~~~~  136 (257)
T 4hg2_A          105 AAQAMHWFDLDRFWAELRRVARPGAVFAAVTY  136 (257)
T ss_dssp             ECSCCTTCCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             EeeehhHhhHHHHHHHHHHHcCCCCEEEEEEC
Confidence            7532     25678899999999999988764

>3ezy_A Dehydrogenase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.04A {Thermotoga maritima}

Probab=93.91  E-value=0.42  Score=42.85  Aligned_cols=131  Identities=18%  Similarity=0.271  Sum_probs=79.1

Q ss_pred             EEEEEcCCHHHHHHHHHHHHC-CCCEEEEEecChhHHH-HHHHcCCCeEEecCCCcccHHHHHHHHHHHcCCCccEEEEC
Q 017916          184 NVLIMGAGPIGLVTMLGARAF-GAPRIVIVDVDDYRLS-VAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDC  261 (364)
Q Consensus       184 ~VLI~Gag~~G~~ai~la~~~-g~~~vv~~~~~~~~~~-~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid~  261 (364)
                      +|.|.|.|.+|...+..++.. +++.+.+++.+.++.+ +.+++|......      ++.    ++..  ...+|+|+.|
T Consensus         4 rvgiIG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~~~~~~~~~------~~~----~ll~--~~~~D~V~i~   71 (344)
T 3ezy_A            4 RIGVIGLGRIGTIHAENLKMIDDAILYAISDVREDRLREMKEKLGVEKAYK------DPH----ELIE--DPNVDAVLVC   71 (344)
T ss_dssp             EEEEECCSHHHHHHHHHGGGSTTEEEEEEECSCHHHHHHHHHHHTCSEEES------SHH----HHHH--CTTCCEEEEC
T ss_pred             EEEEEcCCHHHHHHHHHHHhCCCcEEEEEECCCHHHHHHHHHHhCCCceeC------CHH----HHhc--CCCCCEEEEc
Confidence            688999999998766665544 5644556677777754 456678654331      222    2222  3479999999


Q ss_pred             CCCHHHHHHHHHhcccCCEEEEEcCCCCCccccch---h-hhhcCcEEEe--eccCCCcHHHHHHHHHcCCC
Q 017916          262 AGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLT---P-AAVREVDVVG--VFRYKNTWPLCLELLRSGKI  327 (364)
Q Consensus       262 ~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~---~-~~~~~~~~~~--~~~~~~~~~~~~~~l~~g~~  327 (364)
                      +....+...+..+|..+ +-+.+.-+.........   . .-.+++.+.-  ...+...+..+.+++++|.+
T Consensus        72 tp~~~h~~~~~~al~~g-k~v~~EKP~~~~~~e~~~l~~~a~~~g~~~~v~~~~R~~p~~~~~k~~i~~G~i  142 (344)
T 3ezy_A           72 SSTNTHSELVIACAKAK-KHVFCEKPLSLNLADVDRMIEETKKADVILFTGFNRRFDRNFKKLKEAVENGTI  142 (344)
T ss_dssp             SCGGGHHHHHHHHHHTT-CEEEEESCSCSCHHHHHHHHHHHHHHTCCEEEECGGGGCHHHHHHHHHHHTTTT
T ss_pred             CCCcchHHHHHHHHhcC-CeEEEECCCCCCHHHHHHHHHHHHHhCCcEEEeecccCCHHHHHHHHHHHcCCC
Confidence            99777877888888765 44555432211111111   1 1122333222  23346778889999999887

>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}

Probab=93.91  E-value=0.21  Score=41.26  Aligned_cols=102  Identities=18%  Similarity=0.238  Sum_probs=67.2

Q ss_pred             HHHcCCCCCCEEEEEcCCHHHHHHHHHHHHCC-CCEEEEEecChhHHHHHHH----cCCCe--EEecCCCcccHHHHHHH
Q 017916          174 CRRANIGPETNVLIMGAGPIGLVTMLGARAFG-APRIVIVDVDDYRLSVAKE----LGADN--IVKVSTNLQDIAEEVEK  246 (364)
Q Consensus       174 l~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g-~~~vv~~~~~~~~~~~~~~----lg~~~--~~~~~~~~~~~~~~i~~  246 (364)
                      ++...++++.+||-.|+|. |..+..+++..+ ...+++++.+++..+.+++    .+...  ++..+.  .++.     
T Consensus        30 ~~~~~~~~~~~vLDiG~G~-G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~--~~~~-----  101 (219)
T 3dh0_A           30 LKEFGLKEGMTVLDVGTGA-GFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVNKLGLKNVEVLKSEE--NKIP-----  101 (219)
T ss_dssp             HHHHTCCTTCEEEESSCTT-CTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHTCTTEEEEECBT--TBCS-----
T ss_pred             HHHhCCCCCCEEEEEecCC-CHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeccc--ccCC-----
Confidence            4556778899999998755 667778887762 2379999999987776654    23322  221111  1110     


Q ss_pred             HHHHcCCCccEEEECCC------CHHHHHHHHHhcccCCEEEEEcC
Q 017916          247 IQKAMGTGIDVSFDCAG------FNKTMSTALSATRAGGKVCLVGM  286 (364)
Q Consensus       247 ~~~~~~~~~d~vid~~g------~~~~~~~~~~~l~~~G~~v~~g~  286 (364)
                         .....+|+|+....      ....+..+.+.|+++|+++....
T Consensus       102 ---~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~i~~~  144 (219)
T 3dh0_A          102 ---LPDNTVDFIFMAFTFHELSEPLKFLEELKRVAKPFAYLAIIDW  144 (219)
T ss_dssp             ---SCSSCEEEEEEESCGGGCSSHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             ---CCCCCeeEEEeehhhhhcCCHHHHHHHHHHHhCCCeEEEEEEe
Confidence               01356999986432      14677889999999999998753

>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*

Probab=93.90  E-value=0.4  Score=45.33  Aligned_cols=83  Identities=20%  Similarity=0.279  Sum_probs=51.4

Q ss_pred             CCCCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhH----H---HHHHHcCCCe-EEecCCCcccHHHHHHHHHH
Q 017916          179 IGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYR----L---SVAKELGADN-IVKVSTNLQDIAEEVEKIQK  249 (364)
Q Consensus       179 ~~~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~----~---~~~~~lg~~~-~~~~~~~~~~~~~~i~~~~~  249 (364)
                      ++++.++||+|+ |.+|...++.+...|+++++.+.++...    .   +.++..|... ++..+-.+   .+.++++..
T Consensus       223 ~~~~~~vLITGgtGgIG~~la~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dv~d---~~~v~~~~~  299 (486)
T 2fr1_A          223 WKPTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTD---RESVRELLG  299 (486)
T ss_dssp             CCCCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTC---HHHHHHHHH
T ss_pred             cCCCCEEEEECCCCHHHHHHHHHHHHcCCCEEEEEcCCCCCcHHHHHHHHHHHhcCCEEEEEEeCCCC---HHHHHHHHH
Confidence            467899999998 9999999888888899767777776531    1   2234456432 22222211   122333332


Q ss_pred             Hc--CCCccEEEECCCC
Q 017916          250 AM--GTGIDVSFDCAGF  264 (364)
Q Consensus       250 ~~--~~~~d~vid~~g~  264 (364)
                      ..  .+++|.+|.++|.
T Consensus       300 ~i~~~g~ld~VIh~AG~  316 (486)
T 2fr1_A          300 GIGDDVPLSAVFHAAAT  316 (486)
T ss_dssp             TSCTTSCEEEEEECCCC
T ss_pred             HHHhcCCCcEEEECCcc
Confidence            11  2468999999883

>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}

Probab=93.89  E-value=0.18  Score=41.57  Aligned_cols=97  Identities=19%  Similarity=0.169  Sum_probs=62.2

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHCC-CCEEEEEecChhHHHHHHH----cCCCe-EEecCCCcccHHHHHHHHHHHcCC
Q 017916          180 GPETNVLIMGAGPIGLVTMLGARAFG-APRIVIVDVDDYRLSVAKE----LGADN-IVKVSTNLQDIAEEVEKIQKAMGT  253 (364)
Q Consensus       180 ~~g~~VLI~Gag~~G~~ai~la~~~g-~~~vv~~~~~~~~~~~~~~----lg~~~-~~~~~~~~~~~~~~i~~~~~~~~~  253 (364)
                      .++.+||-.|+|. |..+..+++.+. ...+++++.+++..+.+++    .+... +....   .+..+.+    ....+
T Consensus        55 ~~~~~vLdiG~G~-G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~---~d~~~~~----~~~~~  126 (210)
T 3c3p_A           55 KQPQLVVVPGDGL-GCASWWFARAISISSRVVMIDPDRDNVEHARRMLHDNGLIDRVELQV---GDPLGIA----AGQRD  126 (210)
T ss_dssp             HCCSEEEEESCGG-GHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHSGGGGEEEEE---SCHHHHH----TTCCS
T ss_pred             hCCCEEEEEcCCc-cHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCceEEEEE---ecHHHHh----ccCCC
Confidence            3567999998754 778888888764 3489999999988777654    34321 11111   2222211    11134


Q ss_pred             CccEEEECC---CCHHHHHHHHHhcccCCEEEEEc
Q 017916          254 GIDVSFDCA---GFNKTMSTALSATRAGGKVCLVG  285 (364)
Q Consensus       254 ~~d~vid~~---g~~~~~~~~~~~l~~~G~~v~~g  285 (364)
                       +|+|+-..   .....+..+.+.|+++|.++.-.
T Consensus       127 -fD~v~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~  160 (210)
T 3c3p_A          127 -IDILFMDCDVFNGADVLERMNRCLAKNALLIAVN  160 (210)
T ss_dssp             -EEEEEEETTTSCHHHHHHHHGGGEEEEEEEEEES
T ss_pred             -CCEEEEcCChhhhHHHHHHHHHhcCCCeEEEEEC
Confidence             99988422   22467788899999999998754

>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}

Probab=93.86  E-value=0.29  Score=43.16  Aligned_cols=75  Identities=15%  Similarity=0.158  Sum_probs=44.6

Q ss_pred             CCCCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcCCCccE
Q 017916          179 IGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDV  257 (364)
Q Consensus       179 ~~~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~  257 (364)
                      .++..+|||+|+ |.+|...++.+...|+ .|++++++..+ +.   +++. .+..+-.  + .+.+.++..  +.++|+
T Consensus         9 ~~~~~~vlVTGatG~iG~~l~~~L~~~G~-~V~~~~r~~~~-~~---l~~~-~~~~Dl~--d-~~~~~~~~~--~~~~d~   77 (321)
T 2pk3_A            9 HHGSMRALITGVAGFVGKYLANHLTEQNV-EVFGTSRNNEA-KL---PNVE-MISLDIM--D-SQRVKKVIS--DIKPDY   77 (321)
T ss_dssp             ----CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCTTC-CC---TTEE-EEECCTT--C-HHHHHHHHH--HHCCSE
T ss_pred             ccCcceEEEECCCChHHHHHHHHHHHCCC-EEEEEecCCcc-cc---ceee-EEECCCC--C-HHHHHHHHH--hcCCCE
Confidence            356678999998 9999999999988898 56777666544 11   2322 2222211  1 123333332  135899


Q ss_pred             EEECCCC
Q 017916          258 SFDCAGF  264 (364)
Q Consensus       258 vid~~g~  264 (364)
                      ||.+++.
T Consensus        78 vih~A~~   84 (321)
T 2pk3_A           78 IFHLAAK   84 (321)
T ss_dssp             EEECCSC
T ss_pred             EEEcCcc
Confidence            9999874

>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}

Probab=93.85  E-value=0.64  Score=40.10  Aligned_cols=96  Identities=19%  Similarity=0.202  Sum_probs=65.0

Q ss_pred             HHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcC--CCeEEecCCCcccHHHHHHHHHHHcC
Q 017916          175 RRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELG--ADNIVKVSTNLQDIAEEVEKIQKAMG  252 (364)
Q Consensus       175 ~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg--~~~~~~~~~~~~~~~~~i~~~~~~~~  252 (364)
                      +...++++.+||-.|+|. |..+..+++ .+. .+++++.+++..+.+++..  +. +...+.  .++.         ..
T Consensus        51 ~~l~~~~~~~vLDiGcG~-G~~~~~l~~-~~~-~v~gvD~s~~~~~~a~~~~~~~~-~~~~d~--~~~~---------~~  115 (279)
T 3ccf_A           51 QLLNPQPGEFILDLGCGT-GQLTEKIAQ-SGA-EVLGTDNAATMIEKARQNYPHLH-FDVADA--RNFR---------VD  115 (279)
T ss_dssp             HHHCCCTTCEEEEETCTT-SHHHHHHHH-TTC-EEEEEESCHHHHHHHHHHCTTSC-EEECCT--TTCC---------CS
T ss_pred             HHhCCCCCCEEEEecCCC-CHHHHHHHh-CCC-eEEEEECCHHHHHHHHhhCCCCE-EEECCh--hhCC---------cC
Confidence            445567889999998754 667777777 666 7999999998888877642  22 222111  1110         13


Q ss_pred             CCccEEEECCC-----C-HHHHHHHHHhcccCCEEEEEc
Q 017916          253 TGIDVSFDCAG-----F-NKTMSTALSATRAGGKVCLVG  285 (364)
Q Consensus       253 ~~~d~vid~~g-----~-~~~~~~~~~~l~~~G~~v~~g  285 (364)
                      ..+|+|+....     . ...+..+.+.|+|+|+++...
T Consensus       116 ~~fD~v~~~~~l~~~~d~~~~l~~~~~~LkpgG~l~~~~  154 (279)
T 3ccf_A          116 KPLDAVFSNAMLHWVKEPEAAIASIHQALKSGGRFVAEF  154 (279)
T ss_dssp             SCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             CCcCEEEEcchhhhCcCHHHHHHHHHHhcCCCcEEEEEe
Confidence            57999986432     1 357788999999999988754

>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*

Probab=93.85  E-value=0.46  Score=43.28  Aligned_cols=96  Identities=18%  Similarity=0.101  Sum_probs=63.4

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHH----c---------------CCCeEEecCCCcccHH
Q 017916          181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKE----L---------------GADNIVKVSTNLQDIA  241 (364)
Q Consensus       181 ~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~----l---------------g~~~~~~~~~~~~~~~  241 (364)
                      ++.+||=.++| .|..++.+|+..+...|++++.+++..+.+++    .               |...+..+   ..|..
T Consensus        47 ~~~~VLDl~aG-tG~~~l~~a~~~~~~~V~avDi~~~av~~a~~N~~~n~~~~~~~~~~~~~~~gl~~i~v~---~~Da~  122 (378)
T 2dul_A           47 NPKIVLDALSA-TGIRGIRFALETPAEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGEKTIVIN---HDDAN  122 (378)
T ss_dssp             CCSEEEESSCT-TSHHHHHHHHHSSCSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESSSEEEEE---ESCHH
T ss_pred             CCCEEEECCCc-hhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhcccccccccccccccCCCceEEE---cCcHH
Confidence            57777765543 36777788888776679999999988777653    4               54432221   13433


Q ss_pred             HHHHHHHHHcCCCccEEE-ECCCC-HHHHHHHHHhcccCCEEEEE
Q 017916          242 EEVEKIQKAMGTGIDVSF-DCAGF-NKTMSTALSATRAGGKVCLV  284 (364)
Q Consensus       242 ~~i~~~~~~~~~~~d~vi-d~~g~-~~~~~~~~~~l~~~G~~v~~  284 (364)
                      +.+..    ....+|+|+ |..++ .+.+..+++.++++|.++..
T Consensus       123 ~~~~~----~~~~fD~I~lDP~~~~~~~l~~a~~~lk~gG~l~vt  163 (378)
T 2dul_A          123 RLMAE----RHRYFHFIDLDPFGSPMEFLDTALRSAKRRGILGVT  163 (378)
T ss_dssp             HHHHH----STTCEEEEEECCSSCCHHHHHHHHHHEEEEEEEEEE
T ss_pred             HHHHh----ccCCCCEEEeCCCCCHHHHHHHHHHhcCCCCEEEEE
Confidence            33322    135799876 55565 57788899999999976654

>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}

Probab=93.83  E-value=0.28  Score=42.76  Aligned_cols=86  Identities=13%  Similarity=0.092  Sum_probs=56.3

Q ss_pred             EEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcCCCccEEEECCC
Q 017916          184 NVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAG  263 (364)
Q Consensus       184 ~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid~~g  263 (364)
                      +|.|.|.|.+|...++.+...|. .|.+.++++++.+.+.+.|+...       .+..+.+        ...|+||-|+.
T Consensus         3 ~I~iiG~G~mG~~~a~~l~~~G~-~V~~~dr~~~~~~~~~~~g~~~~-------~~~~~~~--------~~advvi~~v~   66 (287)
T 3pdu_A            3 TYGFLGLGIMGGPMAANLVRAGF-DVTVWNRNPAKCAPLVALGARQA-------SSPAEVC--------AACDITIAMLA   66 (287)
T ss_dssp             CEEEECCSTTHHHHHHHHHHHTC-CEEEECSSGGGGHHHHHHTCEEC-------SCHHHHH--------HHCSEEEECCS
T ss_pred             eEEEEccCHHHHHHHHHHHHCCC-eEEEEcCCHHHHHHHHHCCCeec-------CCHHHHH--------HcCCEEEEEcC
Confidence            68889999999988888888898 57888899888887777675321       1222211        13578888877


Q ss_pred             CHHHHHHHH-------HhcccCCEEEEEc
Q 017916          264 FNKTMSTAL-------SATRAGGKVCLVG  285 (364)
Q Consensus       264 ~~~~~~~~~-------~~l~~~G~~v~~g  285 (364)
                      .+......+       ..++++..++..+
T Consensus        67 ~~~~~~~v~~~~~~l~~~l~~g~~vv~~s   95 (287)
T 3pdu_A           67 DPAAAREVCFGANGVLEGIGGGRGYIDMS   95 (287)
T ss_dssp             SHHHHHHHHHSTTCGGGTCCTTCEEEECS
T ss_pred             CHHHHHHHHcCchhhhhcccCCCEEEECC
Confidence            654444443       3345555555543

>4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A*

Probab=93.83  E-value=0.13  Score=45.95  Aligned_cols=89  Identities=18%  Similarity=0.241  Sum_probs=62.7

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcCCCccEEEE
Q 017916          181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  260 (364)
Q Consensus       181 ~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid  260 (364)
                      .|.+|.|.|.|.+|...++.++.+|+ .|++.+++..+.+....+|+..        .++.+    +.    ...|+|+-
T Consensus       144 ~g~tvGIIG~G~IG~~vA~~l~~~G~-~V~~~d~~~~~~~~~~~~g~~~--------~~l~e----ll----~~aDvV~l  206 (330)
T 4e5n_A          144 DNATVGFLGMGAIGLAMADRLQGWGA-TLQYHEAKALDTQTEQRLGLRQ--------VACSE----LF----ASSDFILL  206 (330)
T ss_dssp             TTCEEEEECCSHHHHHHHHHTTTSCC-EEEEECSSCCCHHHHHHHTEEE--------CCHHH----HH----HHCSEEEE
T ss_pred             CCCEEEEEeeCHHHHHHHHHHHHCCC-EEEEECCCCCcHhHHHhcCcee--------CCHHH----HH----hhCCEEEE
Confidence            47899999999999999999999999 6888887765555666667531        12222    22    24688888


Q ss_pred             CCCCH-H---HH-HHHHHhcccCCEEEEEcC
Q 017916          261 CAGFN-K---TM-STALSATRAGGKVCLVGM  286 (364)
Q Consensus       261 ~~g~~-~---~~-~~~~~~l~~~G~~v~~g~  286 (364)
                      ++... +   .+ ...+..|+++..++.++.
T Consensus       207 ~~P~t~~t~~li~~~~l~~mk~gailIN~ar  237 (330)
T 4e5n_A          207 ALPLNADTLHLVNAELLALVRPGALLVNPCR  237 (330)
T ss_dssp             CCCCSTTTTTCBCHHHHTTSCTTEEEEECSC
T ss_pred             cCCCCHHHHHHhCHHHHhhCCCCcEEEECCC
Confidence            76521 1   11 356788888988888764

>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A*

Probab=93.81  E-value=0.31  Score=46.15  Aligned_cols=79  Identities=19%  Similarity=0.257  Sum_probs=49.3

Q ss_pred             CEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChh----H---HHHHHHcCCCeE-EecCCCcccHHHHHHHHHHHc--
Q 017916          183 TNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDY----R---LSVAKELGADNI-VKVSTNLQDIAEEVEKIQKAM--  251 (364)
Q Consensus       183 ~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~----~---~~~~~~lg~~~~-~~~~~~~~~~~~~i~~~~~~~--  251 (364)
                      .++||+|+ |++|...++.+...|+.+++.+.++..    .   .+.++..|.... +..+-.+   .+.++++....  
T Consensus       240 ~~vLITGgsgGIG~alA~~La~~Ga~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd---~~~v~~~~~~i~~  316 (496)
T 3mje_A          240 GSVLVTGGTGGIGGRVARRLAEQGAAHLVLTSRRGADAPGAAELRAELEQLGVRVTIAACDAAD---REALAALLAELPE  316 (496)
T ss_dssp             SEEEEETCSSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTC---HHHHHHHHHTCCT
T ss_pred             CEEEEECCCCchHHHHHHHHHHCCCcEEEEEeCCCCChHHHHHHHHHHHhcCCeEEEEEccCCC---HHHHHHHHHHHHH
Confidence            89999987 999999999888899977777766531    1   223445565422 2222221   22333333221  


Q ss_pred             CCCccEEEECCCC
Q 017916          252 GTGIDVSFDCAGF  264 (364)
Q Consensus       252 ~~~~d~vid~~g~  264 (364)
                      ..++|++|+++|.
T Consensus       317 ~g~ld~vVh~AGv  329 (496)
T 3mje_A          317 DAPLTAVFHSAGV  329 (496)
T ss_dssp             TSCEEEEEECCCC
T ss_pred             hCCCeEEEECCcc
Confidence            1479999999874

>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B

Probab=93.81  E-value=0.19  Score=45.36  Aligned_cols=91  Identities=19%  Similarity=0.229  Sum_probs=60.9

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHH-HCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcCCCccEE
Q 017916          180 GPETNVLIMGAGPIGLVTMLGAR-AFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVS  258 (364)
Q Consensus       180 ~~g~~VLI~Gag~~G~~ai~la~-~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~v  258 (364)
                      -.|.+|.|.|.|.+|...++.++ .+|. .|++.+++.++.+...++|...+       .++.+.+        ...|+|
T Consensus       161 l~g~~vgIIG~G~IG~~vA~~l~~~~G~-~V~~~d~~~~~~~~~~~~g~~~~-------~~l~ell--------~~aDvV  224 (348)
T 2w2k_A          161 PRGHVLGAVGLGAIQKEIARKAVHGLGM-KLVYYDVAPADAETEKALGAERV-------DSLEELA--------RRSDCV  224 (348)
T ss_dssp             STTCEEEEECCSHHHHHHHHHHHHTTCC-EEEEECSSCCCHHHHHHHTCEEC-------SSHHHHH--------HHCSEE
T ss_pred             CCCCEEEEEEECHHHHHHHHHHHHhcCC-EEEEECCCCcchhhHhhcCcEEe-------CCHHHHh--------ccCCEE
Confidence            35789999999999999999999 9999 68888877666555566665421       1222211        246888


Q ss_pred             EECCCCHH----HH-HHHHHhcccCCEEEEEcC
Q 017916          259 FDCAGFNK----TM-STALSATRAGGKVCLVGM  286 (364)
Q Consensus       259 id~~g~~~----~~-~~~~~~l~~~G~~v~~g~  286 (364)
                      +.++....    .+ ...+..|+++..++..+.
T Consensus       225 il~vp~~~~t~~li~~~~l~~mk~gailin~sr  257 (348)
T 2w2k_A          225 SVSVPYMKLTHHLIDEAFFAAMKPGSRIVNTAR  257 (348)
T ss_dssp             EECCCCSGGGTTCBCHHHHHHSCTTEEEEECSC
T ss_pred             EEeCCCChHHHHHhhHHHHhcCCCCCEEEECCC
Confidence            88765321    11 245667787777776653

>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}

Probab=93.79  E-value=0.25  Score=42.63  Aligned_cols=101  Identities=21%  Similarity=0.324  Sum_probs=66.4

Q ss_pred             HcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHH----cCCCeEEecCCCcccHHHHHHHHHHHc
Q 017916          176 RANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKE----LGADNIVKVSTNLQDIAEEVEKIQKAM  251 (364)
Q Consensus       176 ~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~i~~~~~~~  251 (364)
                      ...+.++.+||-.|+|. |..+..+++......+++++.++...+.+++    .+...+......-.++.        ..
T Consensus        32 ~~~~~~~~~vLDiG~G~-G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~--------~~  102 (276)
T 3mgg_A           32 DTVYPPGAKVLEAGCGI-GAQTVILAKNNPDAEITSIDISPESLEKARENTEKNGIKNVKFLQANIFSLP--------FE  102 (276)
T ss_dssp             TCCCCTTCEEEETTCTT-SHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCGGGCC--------SC
T ss_pred             cccCCCCCeEEEecCCC-CHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEcccccCC--------CC
Confidence            35678899999998764 6777888888633489999999887776654    24332211111111100        01


Q ss_pred             CCCccEEEECC------CCHHHHHHHHHhcccCCEEEEEc
Q 017916          252 GTGIDVSFDCA------GFNKTMSTALSATRAGGKVCLVG  285 (364)
Q Consensus       252 ~~~~d~vid~~------g~~~~~~~~~~~l~~~G~~v~~g  285 (364)
                      .+.+|+|+...      .....+..+.+.|+|+|.++...
T Consensus       103 ~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~  142 (276)
T 3mgg_A          103 DSSFDHIFVCFVLEHLQSPEEALKSLKKVLKPGGTITVIE  142 (276)
T ss_dssp             TTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             CCCeeEEEEechhhhcCCHHHHHHHHHHHcCCCcEEEEEE
Confidence            35799998642      22467788999999999998764

>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}

Probab=93.75  E-value=0.46  Score=39.82  Aligned_cols=102  Identities=19%  Similarity=0.197  Sum_probs=62.6

Q ss_pred             HHcCCCCCCEEEEEcCCHHHHHHHHHHHHCC-CCEEEEEecChhH----HHHHHHcCCCeEEecCCCcccHHHHHHHHHH
Q 017916          175 RRANIGPETNVLIMGAGPIGLVTMLGARAFG-APRIVIVDVDDYR----LSVAKELGADNIVKVSTNLQDIAEEVEKIQK  249 (364)
Q Consensus       175 ~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g-~~~vv~~~~~~~~----~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~  249 (364)
                      +...++++++||-.|+|. |..+..+++..| ...+++++.+++.    .+.++...-...+.-+.  .+.. .+    .
T Consensus        71 ~~~~~~~~~~vLDlG~G~-G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~~~a~~~~~v~~~~~d~--~~~~-~~----~  142 (233)
T 2ipx_A           71 DQIHIKPGAKVLYLGAAS-GTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKKRTNIIPVIEDA--RHPH-KY----R  142 (233)
T ss_dssp             SCCCCCTTCEEEEECCTT-SHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHCTTEEEECSCT--TCGG-GG----G
T ss_pred             heecCCCCCEEEEEcccC-CHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHhhccCCeEEEEccc--CChh-hh----c
Confidence            345678999999998866 778888888864 3479999998653    33444421111221111  1100 00    0


Q ss_pred             HcCCCccEEEECCCCH----HHHHHHHHhcccCCEEEEE
Q 017916          250 AMGTGIDVSFDCAGFN----KTMSTALSATRAGGKVCLV  284 (364)
Q Consensus       250 ~~~~~~d~vid~~g~~----~~~~~~~~~l~~~G~~v~~  284 (364)
                      .....+|+|+.....+    ..+..+.+.|+|+|+++..
T Consensus       143 ~~~~~~D~V~~~~~~~~~~~~~~~~~~~~LkpgG~l~i~  181 (233)
T 2ipx_A          143 MLIAMVDVIFADVAQPDQTRIVALNAHTFLRNGGHFVIS  181 (233)
T ss_dssp             GGCCCEEEEEECCCCTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             ccCCcEEEEEEcCCCccHHHHHHHHHHHHcCCCeEEEEE
Confidence            1145799998654433    1256788999999998873

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}

Probab=93.75  E-value=0.099  Score=46.66  Aligned_cols=73  Identities=21%  Similarity=0.294  Sum_probs=43.9

Q ss_pred             CEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcCCCccEEEEC
Q 017916          183 TNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDC  261 (364)
Q Consensus       183 ~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid~  261 (364)
                      .+|||+|+ |.+|...++.+...|. .|++++++..+.+.+...++.. +..+-.  + .+.+.+..    .++|+||.+
T Consensus        14 M~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~l~~~~~~~-~~~Dl~--d-~~~~~~~~----~~~d~vih~   84 (342)
T 2x4g_A           14 VKYAVLGATGLLGHHAARAIRAAGH-DLVLIHRPSSQIQRLAYLEPEC-RVAEML--D-HAGLERAL----RGLDGVIFS   84 (342)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTC-EEEEEECTTSCGGGGGGGCCEE-EECCTT--C-HHHHHHHT----TTCSEEEEC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCC-EEEEEecChHhhhhhccCCeEE-EEecCC--C-HHHHHHHH----cCCCEEEEC
Confidence            48999998 9999999999988998 5677766655433222223332 222211  2 12233332    369999999


Q ss_pred             CCC
Q 017916          262 AGF  264 (364)
Q Consensus       262 ~g~  264 (364)
                      ++.
T Consensus        85 a~~   87 (342)
T 2x4g_A           85 AGY   87 (342)
T ss_dssp             ---
T ss_pred             Ccc
Confidence            873

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	364
d1pl8a1	185	b.35.1.2 (A:1-145,A:317-356) Ketose reductase (sor	1e-37
d1pl8a2	171	c.2.1.1 (A:146-316) Ketose reductase (sorbitol deh	4e-37
d1e3ja2	170	c.2.1.1 (A:143-312) Ketose reductase (sorbitol deh	4e-32
d1e3ja1	178	b.35.1.2 (A:4-142,A:313-351) Ketose reductase (sor	2e-30
d1kola1	201	b.35.1.2 (A:2-160,A:356-397) Formaldehyde dehydrog	1e-26
d1p0fa1	198	b.35.1.2 (A:1001-1163,A:1338-1372) Alcohol dehydro	3e-26
d1piwa1	192	b.35.1.2 (A:1-152,A:321-360) Cinnamyl alcohol dehy	2e-25
d1cdoa1	199	b.35.1.2 (A:1-164,A:340-374) Alcohol dehydrogenase	1e-22
d1vj0a1	184	b.35.1.2 (A:2-155,A:338-367) Hypothetical protein	3e-22
d1llua1	175	b.35.1.2 (A:2-143,A:310-342) Alcohol dehydrogenase	1e-21
d1rjwa1	171	b.35.1.2 (A:1-137,A:306-339) Alcohol dehydrogenase	2e-21
d1e3ia1	202	b.35.1.2 (A:1-167,A:342-376) Alcohol dehydrogenase	2e-21
d2fzwa1	197	b.35.1.2 (A:1-162,A:339-373) Alcohol dehydrogenase	2e-21
d1jvba1	177	b.35.1.2 (A:1-143,A:314-347) Alcohol dehydrogenase	4e-21
d1jqba1	177	b.35.1.2 (A:1001-1139,A:1314-1351) Bacterial secon	1e-20
d1uufa1	179	b.35.1.2 (A:3-144,A:313-349) Hypothetical protein	2e-20
d1h2ba1	171	b.35.1.2 (A:17-154,A:327-359) Alcohol dehydrogenas	8e-20
d1f8fa1	194	b.35.1.2 (A:4-162,A:337-371) Benzyl alcohol dehydr	1e-18
d2jhfa1	198	b.35.1.2 (A:1-163,A:340-374) Alcohol dehydrogenase	1e-17
d1kola2	195	c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Ps	4e-15
d1f8fa2	174	c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {	9e-15
d1jqba2	174	c.2.1.1 (A:1140-1313) Bacterial secondary alcohol	1e-14
d1p0fa2	174	c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog	8e-12
d2jhfa2	176	c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (	9e-12
d1e3ia2	174	c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (	2e-11
d1vj0a2	182	c.2.1.1 (A:156-337) Hypothetical protein TM0436 {T	2e-11
d1cdoa2	175	c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Ga	2e-11
d2fzwa2	176	c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (	3e-11
d1h2ba2	172	c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeo	3e-11
d1d1ta2	176	c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (	3e-10
d1tt7a1	162	b.35.1.2 (A:2-127,A:295-330) Hypothetical protein	4e-10
d1xa0a1	152	b.35.1.2 (A:1-118,A:295-328) B. subtilis YhfP homo	3e-09
d1rjwa2	168	c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillu	4e-09
d1llua2	166	c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudom	1e-08
d1piwa2	168	c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase	3e-07
d1o89a1	146	b.35.1.2 (A:1-115,A:293-323) Hypothetical protein	9e-07
d1jvba2	170	c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeo	1e-05
d1uufa2	168	c.2.1.1 (A:145-312) Hypothetical protein YahK {Esc	2e-05
d1qora1	147	b.35.1.2 (A:2-112,A:292-327) Quinone oxidoreductas	6e-05
d1gu7a1	175	b.35.1.2 (A:23-160,A:350-386) 2,4-dienoyl-CoA redu	6e-05
d1yb5a2	174	c.2.1.1 (A:121-294) Quinone oxidoreductase {Human	4e-04
d1yb5a1	150	b.35.1.2 (A:6-120,A:295-329) Quinone oxidoreductas	6e-04
d1iz0a1	131	b.35.1.2 (A:1-98,A:270-302) Quinone oxidoreductase	0.002
d1tt7a2	167	c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bac	0.003

>d1pl8a1 b.35.1.2 (A:1-145,A:317-356) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]} Length = 185

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  131 bits (331), Expect = 1e-37
 Identities = 78/177 (44%), Positives = 104/177 (58%), Gaps = 2/177 (1%)

Query: 18  NMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVI 77
           N++  + G   L+++ + +P  GP +VL+RM +VGICGSDVHY +  R  +F+VK+PMV+
Sbjct: 8   NLSLVVHGPGDLRLENYPIPEPGPNEVLLRMHSVGICGSDVHYWEYGRIGNFIVKKPMVL 67

Query: 78  GHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGS 137
           GHE +G +EKVGS VK L PGDRVA+EPG      + CK GRYNL P + F ATPP  G+
Sbjct: 68  GHEASGTVEKVGSSVKHLKPGDRVAIEPGAPRENDEFCKMGRYNLSPSIFFCATPPDDGN 127

Query: 138 LANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIG 194
           L     H A  C+KLPDNV         PL   L A      G    +++    P  
Sbjct: 128 LCRFYKHNAAFCYKLPDNVKPLV-THRFPLEKALEAFETFKKGLGLKIML-KCDPSD 182

>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]} Length = 171

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  129 bits (326), Expect = 4e-37
 Identities = 78/173 (45%), Positives = 113/173 (65%), Gaps = 2/173 (1%)

Query: 156 VSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVD 215
           V+ EEGA+ EPLSVG+HACRR  +     VL+ GAGPIG+VT+L A+A GA ++V+ D+ 
Sbjct: 1   VTFEEGALIEPLSVGIHACRRGGVTLGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLS 60

Query: 216 DYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSAT 275
             RLS AKE+GAD ++++S           + Q  +G   +V+ +C G   ++   + AT
Sbjct: 61  ATRLSKAKEIGADLVLQISKESPQEIARKVEGQ--LGCKPEVTIECTGAEASIQAGIYAT 118

Query: 276 RAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKNTWPLCLELLRSGKID 328
           R+GG + LVG+G    TVPL  AA+REVD+ GVFRY NTWP+ + +L S  ++
Sbjct: 119 RSGGTLVLVGLGSEMTTVPLLHAAIREVDIKGVFRYCNTWPVAISMLASKSVN 171

>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]} Length = 170

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

 Score =  116 bits (291), Expect = 4e-32
 Identities = 80/171 (46%), Positives = 114/171 (66%), Gaps = 1/171 (0%)

Query: 156 VSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVD 215
           VSLEEGA+ EPLSVG+HACRRA +   T VL++GAGPIGLV++L A+A+GA  +      
Sbjct: 1   VSLEEGALLEPLSVGVHACRRAGVQLGTTVLVIGAGPIGLVSVLAAKAYGAFVVCTAR-S 59

Query: 216 DYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSAT 275
             RL VAK  GAD  + V    ++ +  +E+I+ A+G   +V+ DC+G  K ++  ++ T
Sbjct: 60  PRRLEVAKNCGADVTLVVDPAKEEESSIIERIRSAIGDLPNVTIDCSGNEKCITIGINIT 119

Query: 276 RAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKNTWPLCLELLRSGK 326
           R GG + LVGMG   +TVPL  A  RE+D+  VFRY N +P+ LE++ SG+
Sbjct: 120 RTGGTLMLVGMGSQMVTVPLVNACAREIDIKSVFRYCNDYPIALEMVASGR 170

>d1e3ja1 b.35.1.2 (A:4-142,A:313-351) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]} Length = 178

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

 Score =  112 bits (280), Expect = 2e-30
 Identities = 80/174 (45%), Positives = 109/174 (62%), Gaps = 1/174 (0%)

Query: 18  NMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVI 77
           N++A L   N L+++   +P     +VL++M  VGICGSDVHY +  R ADF+VK+PMVI
Sbjct: 2   NLSAVLYKQNDLRLEQRPIPEPKEDEVLLQMAYVGICGSDVHYYEHGRIADFIVKDPMVI 61

Query: 78  GHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGS 137
           GHE +G + KVG  VK L  GDRVA+EPG+ C RC  CK G+YNLCP++ F ATPP  G+
Sbjct: 62  GHEASGTVVKVGKNVKHLKKGDRVAVEPGVPCRRCQFCKEGKYNLCPDLTFCATPPDDGN 121

Query: 138 LANQVVHPADLCFKLPDNVSLEEGAMC-EPLSVGLHACRRANIGPETNVLIMGA 190
           LA   VH AD C KLPDN ++++       L   + A   A    +  + +M +
Sbjct: 122 LARYYVHAADFCHKLPDNCNVKQLVTHSFKLEQTVDAFEAARKKADNTIKVMIS 175

>d1kola1 b.35.1.2 (A:2-160,A:356-397) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]} Length = 201

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

 Score =  103 bits (256), Expect = 1e-26
 Identities = 46/208 (22%), Positives = 82/208 (39%), Gaps = 27/208 (12%)

Query: 18  NMAAWLLGVNTLKIQPFELPSL-------GPYDVLVRMKAVGICGSDVHYLKTLRCADFV 70
           N     LG   +++Q  + P +         + V++++ +  ICGSD H ++        
Sbjct: 2   NRGVVYLGSGKVEVQKIDYPKMQDPRGKKIEHGVILKVVSTNICGSDQHMVR----GRTT 57

Query: 71  VKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMK--- 127
            +  +V+GHE  G + + G +V+ L  GD V++   ++C RC  CK     +C  +    
Sbjct: 58  AQVGLVLGHEITGEVIEKGRDVENLQIGDLVSVPFNVACGRCRSCKEMHTGVCLTVNPAR 117

Query: 128 ------FFATPPVHGSLANQVVHPAD--LCFKLPDNVS-LEEGAMCEPLSVGLHACRRAN 178
                 +       G  A  V+ P       KLPD    +E+  + E + V + +   A 
Sbjct: 118 AGGAYGYVDMGDWTGGQAEYVLVPYADFNLLKLPDRDKAMEKINIAEVVGVQVISLDDAP 177

Query: 179 IGPETNVLIMGAGPIGLVTMLGARAFGA 206
            G         AG      +   + F A
Sbjct: 178 RGYG----EFDAGVPKKFVIDPHKTFSA 201

>d1p0fa1 b.35.1.2 (A:1001-1163,A:1338-1372) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]} Length = 198

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

 Score =  101 bits (252), Expect = 3e-26
 Identities = 37/179 (20%), Positives = 65/179 (36%), Gaps = 16/179 (8%)

Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
           L ++   +     ++V +++ A GICGSD              K P+++GHE  GV+E +
Sbjct: 21  LSLETITVAPPKAHEVRIKILASGICGSDSSV----LKEIIPSKFPVILGHEAVGVVESI 76

Query: 89  GSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADL 148
           G+ V  + PGD+V       C  C  CK    N C +    A   +   + ++       
Sbjct: 77  GAGVTCVKPGDKVIPLFVPQCGSCRACKSSNSNFCEKNDMGAKTGLMADMTSRFTCRGKP 136

Query: 149 CFKLPDNVSLEEGAMCEPLSVG------------LHACRRANIGPETNVLIMGAGPIGL 195
            + L    +  E  +   ++V                     I     +L  G G   +
Sbjct: 137 IYNLMGTSTFTEYTVVADIAVAKIDPKINVNFLVSTKLTLDQINKAFELLSSGQGVRSI 195

>d1piwa1 b.35.1.2 (A:1-152,A:321-360) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 192

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 99.1 bits (246), Expect = 2e-25
 Identities = 37/174 (21%), Positives = 69/174 (39%), Gaps = 12/174 (6%)

Query: 27  NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIE 86
              K   ++      +D+ ++++A G+CGSD+H           +K P+V+GHE  G + 
Sbjct: 19  KNPKKTKYDPKPFYDHDIDIKIEACGVCGSDIHC---AAGHWGNMKMPLVVGHEIVGKVV 75

Query: 87  KVGSEVKTLV-PGDRVAL-EPGISCWRCDHCKGGRYNLCPEMKFFATPP------VHGSL 138
           K+G +  + +  G RV +     SC  CD CK      C +     + P        G  
Sbjct: 76  KLGPKSNSGLKVGQRVGVGAQVFSCLECDRCKNDNEPYCTKFVTTYSQPYEDGYVSQGGY 135

Query: 139 ANQVVHPADLCFKLPDNVSLEEGAMCEP-LSVGLHACRRANIGPETNVLIMGAG 191
           AN V         +P+N+ +E   + E  +        + ++     ++     
Sbjct: 136 ANYVRVHEHFVVPIPENIWVETLPVGEAGVHEAFERMEKGDVRYRFTLVGYDKE 189

>d1cdoa1 b.35.1.2 (A:1-164,A:340-374) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]} Length = 199

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

 Score = 92.3 bits (228), Expect = 1e-22
 Identities = 37/182 (20%), Positives = 65/182 (35%), Gaps = 25/182 (13%)

Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
           L I+  E+      ++ +++ A G+C +D+++L   +  D          HE AG++E V
Sbjct: 21  LVIEEIEVDVPHANEIRIKIIATGVCHTDLYHLFEGKHKDGFPVVLG---HEGAGIVESV 77

Query: 89  GSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVH------------- 135
           G  V    PG++V       C  C  C+  + N C +     +P V              
Sbjct: 78  GPGVTEFQPGEKVIPLFISQCGECRFCQSPKTNQCVKGWANESPDVMSPKETRFTCKGRK 137

Query: 136 -------GSLANQVVHPADLCFKLPDNVSLEEGA-MCEPLSVGLHAC-RRANIGPETNVL 186
                   + +   V       K+  +V L+E      PL     A     +      VL
Sbjct: 138 VLQFLGTSTFSQYTVVNQIAVAKIDPSVKLDEFITHRMPLESVNDAIDLMKHGKCIRTVL 197

Query: 187 IM 188
            +
Sbjct: 198 SL 199

>d1vj0a1 b.35.1.2 (A:2-155,A:338-367) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]} Length = 184

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

 Score = 90.7 bits (224), Expect = 3e-22
 Identities = 43/173 (24%), Positives = 69/173 (39%), Gaps = 22/173 (12%)

Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
           L  + FE+  +    +LV + + G+CGSDVH     R  D  V  P+++GHE AG + +V
Sbjct: 17  LVYKEFEISDIPRGSILVEILSAGVCGSDVHM---FRGEDPRVPLPIILGHEGAGRVVEV 73

Query: 89  GSEVKTLVPGD-----RVALEPGISCWRCDHCK-GGRYNLCPEMKFF-------ATPPVH 135
             E + L          +    GI+C  C  CK      LCP  K +         P + 
Sbjct: 74  NGEKRDLNGELLKPGDLIVWNRGITCGECYWCKVSKEPYLCPNRKVYGINRGCSEYPHLR 133

Query: 136 GSLANQ-VVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLI 187
           G  ++  V+ P     K+ + ++        PL     A           V++
Sbjct: 134 GCYSSHIVLDPETDVLKVSEKITHR-----LPLKEANKALELMESREALKVIL 181

>d1llua1 b.35.1.2 (A:2-143,A:310-342) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} Length = 175

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 88.8 bits (219), Expect = 1e-21
 Identities = 46/162 (28%), Positives = 70/162 (43%), Gaps = 6/162 (3%)

Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
           L+I+  ++P  GP  VLV+++A G+C +D+H  +           P + GHE  G +  V
Sbjct: 18  LRIEEVKVPLPGPGQVLVKIEASGVCHTDLHAAE--GDWPVKPPLPFIPGHEGVGYVAAV 75

Query: 89  GSEVKTLVPGDRVALEPGISCW-RCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPAD 147
           GS V  +  GDRV +    +    C+HC  G   LC   +      V+G  A  V+   +
Sbjct: 76  GSGVTRVKEGDRVGIPWLYTACGCCEHCLTGWETLCESQQNT-GYSVNGGYAEYVLADPN 134

Query: 148 LCFKLPDNVSLEEGA-MCEPLSVGLHACRRANIGPETNVLIM 188
               LP NV         + ++  L   R   I     VL M
Sbjct: 135 YVGILPKNVKATIHPGKLDDINQILDQMRAGQIEGRI-VLEM 175

>d1rjwa1 b.35.1.2 (A:1-137,A:306-339) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} Length = 171

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

 Score = 88.1 bits (217), Expect = 2e-21
 Identities = 52/162 (32%), Positives = 74/162 (45%), Gaps = 6/162 (3%)

Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
           LKI+  E P++   +VLVR+KA G+C +D+H            K P++ GHE  G++E+V
Sbjct: 13  LKIKEVEKPTISYGEVLVRIKACGVCHTDLHAAH--GDWPVKPKLPLIPGHEGVGIVEEV 70

Query: 89  GSEVKTLVPGDRVALEPGISCWR-CDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPAD 147
           G  V  L  GDRV +    S    CD+C  G+  LC   K      V G  A      AD
Sbjct: 71  GPGVTHLKVGDRVGIPWLYSACGHCDYCLSGQETLCEHQKNA-GYSVDGGYAEYCRAAAD 129

Query: 148 LCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMG 189
              K+PDN  +E     E ++       +  I     VL + 
Sbjct: 130 YVVKIPDNTIIEV-QPLEKINEVFDRMLKGQINGRV-VLTLE 169

>d1e3ia1 b.35.1.2 (A:1-167,A:342-376) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]} Length = 202

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

 Score = 88.4 bits (218), Expect = 2e-21
 Identities = 37/173 (21%), Positives = 63/173 (36%), Gaps = 31/173 (17%)

Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
           L I+  E+      +V +++ A  +C +D++              P+V+GHECAG++E V
Sbjct: 21  LCIEEIEVSPPKACEVRIQVIATCVCPTDINA----TDPKKKALFPVVLGHECAGIVESV 76

Query: 89  GSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPV-------------- 134
           G  V    PGD+V       C RC  C     NLC +++ F  P +              
Sbjct: 77  GPGVTNFKPGDKVIPFFAPQCKRCKLCLSPLTNLCGKLRNFKYPTIDQELMEDRTSRFTC 136

Query: 135 ----------HGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRA 177
                       S +   V       ++ D   L+        ++   +   A
Sbjct: 137 KGRSIYHFMGVSSFSQYTVVSEANLARVDDEFDLDLLV---THALPFESINDA 186

>d2fzwa1 b.35.1.2 (A:1-162,A:339-373) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} Length = 197

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

 Score = 88.4 bits (218), Expect = 2e-21
 Identities = 34/169 (20%), Positives = 63/169 (37%), Gaps = 26/169 (15%)

Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
           L I+  E+     ++V +++ A  +C +D +   TL  AD     P+++GH  AG++E V
Sbjct: 19  LSIEEIEVAPPKAHEVRIKIIATAVCHTDAY---TLSGADPEGCFPVILGHLGAGIVESV 75

Query: 89  GSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVH------------- 135
           G  V  L  GD V       C  C  C   + NLC +++      +              
Sbjct: 76  GEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLMPDGTSRFTCKGKT 135

Query: 136 -------GSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRA 177
                   + +   V       K+   + ++E       ++      +A
Sbjct: 136 ILHYMGTSTFSEYTVVADISVAKIDPLIKVDEFV---THNLSFDEINKA 181

>d1jvba1 b.35.1.2 (A:1-143,A:314-347) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]} Length = 177

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

 Score = 87.3 bits (215), Expect = 4e-21
 Identities = 48/166 (28%), Positives = 71/166 (42%), Gaps = 9/166 (5%)

Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVH-----YLKTLRCADFVVKEPMVIGHECAG 83
           L +Q   +P      VL++++A G+C SDVH     +       D  VK P+ +GHE AG
Sbjct: 13  LSLQEIGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHEIAG 72

Query: 84  VIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVV 143
            IE+VG EV     GD VA+ P      C +C+ G  +LC   ++       G+ A  V+
Sbjct: 73  KIEEVGDEVVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPRWLGI-NFDGAYAEYVI 131

Query: 144 HPA-DLCFKLPDNVSLEEGAM-CEPLSVGLHACRRANIGPETNVLI 187
            P     +KL     +    M  E  +  +             VLI
Sbjct: 132 VPHYKYMYKLRRVKPMITKTMKLEEANEAIDNLENFKAIGRQ-VLI 176

>d1jqba1 b.35.1.2 (A:1001-1139,A:1314-1351) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]} Length = 177

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

 Score = 85.8 bits (211), Expect = 1e-20
 Identities = 48/182 (26%), Positives = 68/182 (37%), Gaps = 16/182 (8%)

Query: 20  AAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGH 79
              +LG+N L     E P  G YD +VR  AV  C SD+H    +       ++ M++GH
Sbjct: 3   GFAMLGINKLGWIEKERPVAGSYDAIVRPLAVSPCTSDIHT---VFEGALGDRKNMILGH 59

Query: 80  ECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFF--ATPPVHGS 137
           E  G + +VGSEVK   PGDRV +      WR    + G       M      +    G 
Sbjct: 60  EAVGEVVEVGSEVKDFKPGDRVIVPCTTPDWRSLEVQAGFQQHSNGMLAGWKFSNFKDGV 119

Query: 138 LANQVVHPA--DLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGL 195
                           LP +V L +      +  G      A       +L+M   P  L
Sbjct: 120 FGEYFHVNDADMNLAILPKDVDLSKLVTH--VYHGFDHIEEA-------LLLMKDKPKDL 170

Query: 196 VT 197
           + 
Sbjct: 171 IK 172

>d1uufa1 b.35.1.2 (A:3-144,A:313-349) Hypothetical protein YahK {Escherichia coli [TaxId: 562]} Length = 179

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

 Score = 85.0 bits (209), Expect = 2e-20
 Identities = 36/160 (22%), Positives = 59/160 (36%), Gaps = 13/160 (8%)

Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
           L+         GP DV + +   G+C SD+H    +R        P V GHE  G +  V
Sbjct: 13  LEPMDITRREPGPNDVKIEIAYCGVCHSDLHQ---VRSEWAGTVYPCVPGHEIVGRVVAV 69

Query: 89  GSEVKTLVPGDRVALEPGISCWR-CDHCKGGRYNLCPEMKFFATPP-------VHGSLAN 140
           G +V+   PGD V +   +   + C+ C+ G  N C  M      P         G  + 
Sbjct: 70  GDQVEKYAPGDLVGVGCIVDSCKHCEECEDGLENYCDHMTGTYNSPTPDEPGHTLGGYSQ 129

Query: 141 QVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIG 180
           Q+V       ++       E    + ++       R ++ 
Sbjct: 130 QIVVHERYVLRIRVA--DIEMIRADQINEAYERMLRGDVK 167

>d1h2ba1 b.35.1.2 (A:17-154,A:327-359) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]} Length = 171

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

 Score = 83.6 bits (205), Expect = 8e-20
 Identities = 45/161 (27%), Positives = 73/161 (45%), Gaps = 4/161 (2%)

Query: 29  LKIQPFELPSL-GPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEK 87
           L+I+  + P L G +DV+VR+   G+C +D+H ++ +       K P  +GHE  G IE+
Sbjct: 12  LRIEDVDYPRLEGRFDVIVRIAGAGVCHTDLHLVQGMWHELLQPKLPYTLGHENVGYIEE 71

Query: 88  VGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPAD 147
           V   V+ L  GD V L P ++   C  C+ G    C  ++F       G  A  +     
Sbjct: 72  VAEGVEGLEKGDPVILHPAVTDGTCLACRAGEDMHCENLEFPGLNIDGGF-AEFMRTSHR 130

Query: 148 LCFKLPDNVSLEEGA-MCEPLSVGLHACRRANIGPETNVLI 187
              KLP +V +E      + ++  L    +  +     VLI
Sbjct: 131 SVIKLPKDVRVEVDIHKLDEINDVLERLEKGEVLGRA-VLI 170

>d1f8fa1 b.35.1.2 (A:4-162,A:337-371) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]} Length = 194

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

 Score = 80.8 bits (198), Expect = 1e-18
 Identities = 35/197 (17%), Positives = 66/197 (33%), Gaps = 11/197 (5%)

Query: 19  MAAWLLGVNT-LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVI 77
           +AA         ++Q  ++      +VLV++ A G+C +D+               P V+
Sbjct: 5   IAAVTPCKGADFELQALKIRQPQGDEVLVKVVATGMCHTDLIVRDQKYPVPL----PAVL 60

Query: 78  GHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGS 137
           GHE +G+IE +G  V  L  GD V L     C +C  C  G    C E          G+
Sbjct: 61  GHEGSGIIEAIGPNVTELQVGDHVVLSY-GYCGKCTQCNTGNPAYCSEF---FGRNFSGA 116

Query: 138 LANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRR--ANIGPETNVLIMGAGPIGL 195
            +            + ++    + +         +   +   +   +  V       I  
Sbjct: 117 DSEGNHALCTHDQGVVNDHFFAQSSFATYALSRENNTVKVTKDFPFDQLVKFYAFDEINQ 176

Query: 196 VTMLGARAFGAPRIVIV 212
             +   +      I+ +
Sbjct: 177 AAIDSRKGITLKPIIKI 193

>d2jhfa1 b.35.1.2 (A:1-163,A:340-374) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]} Length = 198

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

 Score = 78.0 bits (191), Expect = 1e-17
 Identities = 40/182 (21%), Positives = 64/182 (35%), Gaps = 32/182 (17%)

Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
             I+  E+     ++V ++M A GIC SD H          V   P++ GHE AG++E +
Sbjct: 21  FSIEEVEVAPPKAHEVRIKMVATGICRSDDHV----VSGTLVTPLPVIAGHEAAGIVESI 76

Query: 89  GSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVH------------- 135
           G  V T+ PGD+V       C +C  CK    N C +                       
Sbjct: 77  GEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSRFTCRGKP 136

Query: 136 -------GSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIM 188
                   + +   V       K+    +L      +PL   +    +  I    ++L  
Sbjct: 137 IHHFLGTSTFSQYTVVDEISVAKIDAAFAL------DPLITHVLPFEK--INEGFDLLRS 188

Query: 189 GA 190
           G 
Sbjct: 189 GE 190

>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]} Length = 195

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

 Score = 71.0 bits (173), Expect = 4e-15
 Identities = 36/155 (23%), Positives = 64/155 (41%), Gaps = 19/155 (12%)

Query: 162 AMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSV 221
            + + L  G H    A +GP + V + GAGP+GL     AR  GA  +++ D++  RL+ 
Sbjct: 6   CLSDILPTGYHGAVTAGVGPGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLNPARLAH 65

Query: 222 AKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGF---------------NK 266
           AK  G +      +    + E++  +       +D + D  GF                 
Sbjct: 66  AKAQGFEIA--DLSLDTPLHEQIAALL--GEPEVDCAVDAVGFEARGHGHEGAKHEAPAT 121

Query: 267 TMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAVR 301
            +++ +  TR  GK+ + G+   E    +  AA  
Sbjct: 122 VLNSLMQVTRVAGKIGIPGLYVTEDPGAVDAAAKI 156

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]} Length = 174

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

 Score = 69.5 bits (169), Expect = 9e-15
 Identities = 40/173 (23%), Positives = 74/173 (42%), Gaps = 16/173 (9%)

Query: 165 EPLSVGLH-----ACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRL 219
            PL  G+            + P ++ +  GAG +GL  +L A+  GA  I+ VD+ + RL
Sbjct: 7   GPLGCGIQTGAGACINALKVTPASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRL 66

Query: 220 SVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGG 279
            +AK+LGA +++   T      + V  I++    G++ + +  G  + +   + A    G
Sbjct: 67  ELAKQLGATHVINSKTQ-----DPVAAIKEITDGGVNFALESTGSPEILKQGVDALGILG 121

Query: 280 KVCLVGMGH--HEMTVPLTPAAVREVDVVGVF----RYKNTWPLCLELLRSGK 326
           K+ +VG           +    +    ++GV       K   P  + L + GK
Sbjct: 122 KIAVVGAPQLGTTAQFDVNDLLLGGKTILGVVEGSGSPKKFIPELVRLYQQGK 174

>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]} Length = 174

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

 Score = 69.2 bits (168), Expect = 1e-14
 Identities = 36/178 (20%), Positives = 75/178 (42%), Gaps = 11/178 (6%)

Query: 156 VSLEEGAM-CEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDV 214
           + LE   M  + ++ G H    A+I   ++V+++G G +GL+ + GA+  GA RI+ V  
Sbjct: 1   MPLENAVMITDMMTTGFHGAELADIEMGSSVVVIGIGAVGLMGIAGAKLRGAGRIIGVGS 60

Query: 215 DDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSA 274
               +  AK  GA +I     N ++   E + ++   G G+D      G ++T+S A+  
Sbjct: 61  RPICVEAAKFYGATDI----LNYKNGHIEDQVMKLTNGKGVDRVIMAGGGSETLSQAVKM 116

Query: 275 TRAGGKVCLVGMGHHEMTVPLTPAA----VREVDVVGVF--RYKNTWPLCLELLRSGK 326
            + GG +  +        + +        +    + G      +       +++   +
Sbjct: 117 VKPGGIISNINYHGSGDALLIPRVEWGCGMAHKTIKGGLCPGGRLRAERLRDMVVYNR 174

>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]} Length = 174

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

 Score = 61.0 bits (147), Expect = 8e-12
 Identities = 37/160 (23%), Positives = 65/160 (40%), Gaps = 10/160 (6%)

Query: 173 ACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVK 232
           A   A + P +   + G G +G   ++G +A GA RI+ V     +   A ELGA   + 
Sbjct: 19  AVNTAKVTPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIELGATECL- 77

Query: 233 VSTNLQDIAEEVEKIQKAMGT-GIDVSFDCAGFNKTMSTALSATRA-GGKVCLVGMGHHE 290
              N +D  + + ++       G+D + +CAG  +TM  AL +T    G   ++G+    
Sbjct: 78  ---NPKDYDKPIYEVICEKTNGGVDYAVECAGRIETMMNALQSTYCGSGVTVVLGLASPN 134

Query: 291 MTVPLTPAA-VREVDVVGVF---RYKNTWPLCLELLRSGK 326
             +PL P   +    + G              ++     K
Sbjct: 135 ERLPLDPLLLLTGRSLKGSVFGGFKGEEVSRLVDDYMKKK 174

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]} Length = 176

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

 Score = 61.2 bits (147), Expect = 9e-12
 Identities = 40/159 (25%), Positives = 71/159 (44%), Gaps = 11/159 (6%)

Query: 175 RRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVS 234
           + A +   +   + G G +GL  ++G +A GA RI+ VD++  + + AKE+GA   V   
Sbjct: 22  KVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECV--- 78

Query: 235 TNLQDIAEEVEKIQKAMGT-GIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTV 293
            N QD  + ++++   M   G+D SF+  G   TM TALS  +    V ++     +   
Sbjct: 79  -NPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDSQN 137

Query: 294 PLTPAA--VREVDVVGV----FRYKNTWPLCLELLRSGK 326
                   +      G     F+ K++ P  +    + K
Sbjct: 138 LSMNPMLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKK 176

>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]} Length = 174

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

 Score = 59.9 bits (144), Expect = 2e-11
 Identities = 36/158 (22%), Positives = 69/158 (43%), Gaps = 7/158 (4%)

Query: 173 ACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVK 232
           A   A + P +   + G G +GL  ++G +  GA RI+ +D++  +   AK LGA + + 
Sbjct: 20  AINTAKVTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKALGATDCLN 79

Query: 233 VSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMT 292
                + + + + ++      G+D S DCAG  +T+  A+  T  G   C V     +  
Sbjct: 80  PRELDKPVQDVITELTAG---GVDYSLDCAGTAQTLKAAVDCTVLGWGSCTVVGAKVDEM 136

Query: 293 VPLTPAAVREVDVVGVF----RYKNTWPLCLELLRSGK 326
              T   +    + G F    +  ++ P  +   ++ K
Sbjct: 137 TIPTVDVILGRSINGTFFGGWKSVDSVPNLVSDYKNKK 174

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]} Length = 182

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

 Score = 60.0 bits (144), Expect = 2e-11
 Identities = 35/183 (19%), Positives = 71/183 (38%), Gaps = 5/183 (2%)

Query: 154 DNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVD 213
           D++ +   AMC   +                V+I GAGP+GL  ++ AR+ GA  ++++ 
Sbjct: 1   DDLDVLAMAMCSGATAYHAFDEYPESFAGKTVVIQGAGPLGLFGVVIARSLGAENVIVIA 60

Query: 214 VDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALS 273
               RL +A+E+GAD  +       +   +   +    G G D   +  G ++ +     
Sbjct: 61  GSPNRLKLAEEIGADLTLNRRETSVEERRK-AIMDITHGRGADFILEATGDSRALLEGSE 119

Query: 274 ATRAGGKVCLVGMGHHEMTVPLTPAA---VREVDVVGVFRY-KNTWPLCLELLRSGKIDV 329
             R GG   + G+   +  VP        ++     G++    + +   + +       +
Sbjct: 120 LLRRGGFYSVAGVAVPQDPVPFKVYEWLVLKNATFKGIWVSDTSHFVKTVSITSRNYQLL 179

Query: 330 KPL 332
             L
Sbjct: 180 SKL 182

>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]} Length = 175

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

 Score = 59.6 bits (143), Expect = 2e-11
 Identities = 38/157 (24%), Positives = 63/157 (40%), Gaps = 8/157 (5%)

Query: 175 RRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVS 234
             A + P +   + G G +GL  ++G  + GA RI+ VD++  +   AK  GA + V  +
Sbjct: 22  NTAKVEPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVFGATDFVNPN 81

Query: 235 TNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAG-GKVCLVGMGHHEMTV 293
            + + I    + + K    G+D S +C G    M  AL +   G G   LVG        
Sbjct: 82  DHSEPI---SQVLSKMTNGGVDFSLECVGNVGVMRNALESCLKGWGVSVLVGWTDLHDVA 138

Query: 294 PLTPAAVREVDVVGV----FRYKNTWPLCLELLRSGK 326
                 +      G     F+ K+  P  ++     K
Sbjct: 139 TRPIQLIAGRTWKGSMFGGFKGKDGVPKMVKAYLDKK 175

>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} Length = 176

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

 Score = 59.6 bits (143), Expect = 3e-11
 Identities = 41/158 (25%), Positives = 65/158 (41%), Gaps = 9/158 (5%)

Query: 175 RRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVS 234
             A + P +   + G G +GL  ++G +  GA RI+ VD++  + + AKE GA   +   
Sbjct: 22  NTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATECINPQ 81

Query: 235 TNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAG-GKVCLVGMGHHEMTV 293
              + I    E + +    G+D SF+C G  K M  AL A   G G   +VG+      +
Sbjct: 82  DFSKPI---QEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWGVSVVVGVAASGEEI 138

Query: 294 PLTPAA-VREVDVVGVF----RYKNTWPLCLELLRSGK 326
              P   V      G      +   + P  +    S K
Sbjct: 139 ATRPFQLVTGRTWKGTAFGGWKSVESVPKLVSEYMSKK 176

>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]} Length = 172

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

 Score = 59.6 bits (143), Expect = 3e-11
 Identities = 38/178 (21%), Positives = 70/178 (39%), Gaps = 13/178 (7%)

Query: 156 VSLEEGAMCEPLSV----GLHACRRA--NIGPETNVLIMGAGPIGLVTMLGARAFGAPRI 209
           +S E+     PL+        A ++A   + P   V I+G G +G + +   +      +
Sbjct: 1   ISREKLVEMAPLADAGITAYRAVKKAARTLYPGAYVAIVGVGGLGHIAVQLLKVMTPATV 60

Query: 210 VIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMS 269
           + +DV + +L +A+ LGAD++V    +          ++   G G++V+ D  G   T+ 
Sbjct: 61  IALDVKEEKLKLAERLGADHVVDARRDPVKQ-----VMELTRGRGVNVAMDFVGSQATVD 115

Query: 270 TALSATRAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY-KNTWPLCLELLRSGK 326
                    G++ +VG    E+  P       EV   G            + L   GK
Sbjct: 116 YTPYLLGRMGRLIIVGY-GGELRFPTIRVISSEVSFEGSLVGNYVELHELVTLALQGK 172

>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} Length = 176

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

 Score = 56.4 bits (135), Expect = 3e-10
 Identities = 29/147 (19%), Positives = 61/147 (41%), Gaps = 8/147 (5%)

Query: 167 LSVGLHAC-RRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKEL 225
            S G  A  +   + P +  ++ G G +GL  ++G ++ GA RI+ +D++  +   A  +
Sbjct: 14  FSTGYGAAVKTGKVKPGSTCVVFGLGGVGLSVIMGCKSAGASRIIGIDLNKDKFEKAMAV 73

Query: 226 GADNIVKVSTNLQDIAEEVEKIQKAMG-TGIDVSFDCAGFNKTMSTALSATRAGGKVC-L 283
           GA   +    + +D  + + ++   M    +  +F+  G  +TM  AL++         +
Sbjct: 74  GATECI----SPKDSTKPISEVLSEMTGNNVGYTFEVIGHLETMIDALASCHMNYGTSVV 129

Query: 284 VGMGHHEMTVPLTP-AAVREVDVVGVF 309
           VG+      +   P          G  
Sbjct: 130 VGVPPSAKMLTYDPMLLFTGRTWKGCV 156

>d1tt7a1 b.35.1.2 (A:2-127,A:295-330) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]} Length = 162

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

 Score = 55.6 bits (133), Expect = 4e-10
 Identities = 23/172 (13%), Positives = 44/172 (25%), Gaps = 27/172 (15%)

Query: 25  GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGV 84
              ++ ++      L    VL+++   GI   D    K            + I       
Sbjct: 14  DDVSVHVKTISTEDLPKDGVLIKVAYSGINYKDGLAGKAGGNIVREYPLILGIDAAG--- 70

Query: 85  IEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVH 144
                                  +    +  +    +      +       G L+     
Sbjct: 71  -----------------------TVVSSNDPRFAEGDEVIATSYELGVSRDGGLSEYASV 107

Query: 145 PADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLV 196
           P D    LP N+SL+E  + + L++           P     I+     G V
Sbjct: 108 PGDWLVPLPQNLSLKEAMVDQLLTIVDREVSL-EETPGALKDILQNRIQGRV 158

>d1xa0a1 b.35.1.2 (A:1-118,A:295-328) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]} Length = 152

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

 Score = 53.0 bits (126), Expect = 3e-09
 Identities = 24/177 (13%), Positives = 39/177 (22%), Gaps = 32/177 (18%)

Query: 18  NMAAWLL----GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKE 73
              A+++       T  +Q   +  L   DVLVR+    +   D                
Sbjct: 3   AFQAFVVNKTETEFTAGVQTISMDDLPEGDVLVRVHYSSVNYKDGLASIPDGKIVKTYPF 62

Query: 74  PMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPP 133
              I          V S+      GD V                                
Sbjct: 63  VPGIDLAG----VVVSSQHPRFREGDEVIATGYEIGV----------------------T 96

Query: 134 VHGSLANQVVHPADLCFKLPDNVSLEEGAM-CEPLSVGLHACRRANIGPETNVLIMG 189
             G  +       +    LP  +      +    L   L    R  +   T V+ + 
Sbjct: 97  HFGGYSEYARLHGEWLVPLPKGLERIAQEISLAELPQALKRILRGELRGRT-VVRLA 152

>d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} Length = 168

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

 Score = 53.2 bits (126), Expect = 4e-09
 Identities = 47/174 (27%), Positives = 73/174 (41%), Gaps = 11/174 (6%)

Query: 157 SLEEGA--MCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDV 214
           S EE A   C  ++    A +     P   V I G G +G V +  A+A G   +V VD+
Sbjct: 2   SFEEAAPIFCAGVTT-YKALKVTGAKPGEWVAIYGIGGLGHVAVQYAKAMG-LNVVAVDI 59

Query: 215 DDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSA 274
            D +L +AKELGAD +V              K  K    G+  +   A       +A ++
Sbjct: 60  GDEKLELAKELGADLVVNPLKEDAA------KFMKEKVGGVHAAVVTAVSKPAFQSAYNS 113

Query: 275 TRAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVF-RYKNTWPLCLELLRSGKI 327
            R GG   LVG+   EM +P+    +  + ++G     +      L+    GK+
Sbjct: 114 IRRGGACVLVGLPPEEMPIPIFDTVLNGIKIIGSIVGTRKDLQEALQFAAEGKV 167

>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} Length = 166

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 52.0 bits (123), Expect = 1e-08
 Identities = 41/173 (23%), Positives = 69/173 (39%), Gaps = 11/173 (6%)

Query: 156 VSLEEGA--MCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVD 213
           V   E A  +C  ++V     ++ N  P   V I G G +G V +  ARA G   +  +D
Sbjct: 1   VEFAEIAPILCAGVTV-YKGLKQTNARPGQWVAISGIGGLGHVAVQYARAMG-LHVAAID 58

Query: 214 VDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALS 273
           +DD +L +A++LGA   V          E+  +  +    G       A  N     A+ 
Sbjct: 59  IDDAKLELARKLGASLTV------NARQEDPVEAIQRDIGGAHGVLVTAVSNSAFGQAIG 112

Query: 274 ATRAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY-KNTWPLCLELLRSG 325
             R GG + LVG+   +   P+    ++ + + G     +      L+    G
Sbjct: 113 MARRGGTIALVGLPPGDFPTPIFDVVLKGLHIAGSIVGTRADLQEALDFAGEG 165

>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 168

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 47.7 bits (112), Expect = 3e-07
 Identities = 35/175 (20%), Positives = 62/175 (35%), Gaps = 11/175 (6%)

Query: 156 VSLEEGA--MCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVD 213
           +     A  +C  L+V      R   GP   V I+G G IG +  L ++A GA   VI  
Sbjct: 1   IPSHLAAPLLCGGLTV-YSPLVRNGCGPGKKVGIVGLGGIGSMGTLISKAMGAETYVISR 59

Query: 214 VDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALS 273
               R   A ++GAD+         +  +  EK        +  +      +   +    
Sbjct: 60  SSRKR-EDAMKMGADHY----IATLEEGDWGEKYFDTFDLIVVCASSLTDID--FNIMPK 112

Query: 274 ATRAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY-KNTWPLCLELLRSGKI 327
           A + GG++  + +      + L P  ++ V +              L+L+    I
Sbjct: 113 AMKVGGRIVSISIPEQHEMLSLKPYGLKAVSISYSALGSIKELNQLLKLVSEKDI 167

>d1o89a1 b.35.1.2 (A:1-115,A:293-323) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]} Length = 146

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

 Score = 46.0 bits (108), Expect = 9e-07
 Identities = 23/149 (15%), Positives = 39/149 (26%), Gaps = 30/149 (20%)

Query: 19  MAAWLL----GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEP 74
           + A LL    G     +Q  +   L   DV V +    +   D   +        +   P
Sbjct: 1   LQALLLEQQDGKTLASVQTLDESRLPEGDVTVDVHWSSLNYKDALAIT--GKGKIIRNFP 58

Query: 75  MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPV 134
           M+ G + AG +              R      +                           
Sbjct: 59  MIPGIDFAGTVRT--------SEDPRFHAGQEVLLTGWGVG----------------ENH 94

Query: 135 HGSLANQVVHPADLCFKLPDNVSLEEGAM 163
            G LA Q     D    +P   + +E ++
Sbjct: 95  WGGLAEQARVKGDWLVAMPQGQAAKEISL 123

>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]} Length = 170

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

 Score = 42.8 bits (99), Expect = 1e-05
 Identities = 36/159 (22%), Positives = 62/159 (38%), Gaps = 6/159 (3%)

Query: 170 GLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLS-VAKELGAD 228
              A R+A++ P   +L++GAG       +      +   +I           AK  GAD
Sbjct: 16  TYRAVRKASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRAGAD 75

Query: 229 NIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGH 288
            ++  S   QD   E+ +I      G+D   D     KT+S    A    GK  +VG+  
Sbjct: 76  YVINASM--QDPLAEIRRIT--ESKGVDAVIDLNNSEKTLSVYPKALAKQGKYVMVGLFG 131

Query: 289 HEMTVPLTPAAVREVDVVGVFRY-KNTWPLCLELLRSGK 326
            ++        + E+  VG     ++ +   + L  +GK
Sbjct: 132 ADLHYHAPLITLSEIQFVGSLVGNQSDFLGIMRLAEAGK 170

>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]} Length = 168

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

 Score = 42.6 bits (99), Expect = 2e-05
 Identities = 30/156 (19%), Positives = 48/156 (30%), Gaps = 15/156 (9%)

Query: 159 EEGAMCEPLSVG----LHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDV 214
           E+ A   PL           R    GP   V ++G G +G + +  A A GA  +     
Sbjct: 4   EQLAAVAPLLCAGITTYSPLRHWQAGPGKKVGVVGIGGLGHMGIKLAHAMGAHVVAFTTS 63

Query: 215 DDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSA 274
           +  R   AK LGAD +         +         A     D   +       +    + 
Sbjct: 64  EAKR-EAAKALGADEV---------VNSRNADEMAAHLKSFDFILNTVAAPHNLDDFTTL 113

Query: 275 TRAGGKVCLVGMGHHEMTVPLTPAAV-REVDVVGVF 309
            +  G + LVG        P     + +   + G  
Sbjct: 114 LKRDGTMTLVGAPATPHKSPEVFNLIMKRRAIAGSM 149

>d1qora1 b.35.1.2 (A:2-112,A:292-327) Quinone oxidoreductase {Escherichia coli [TaxId: 562]} Length = 147

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

 Score = 40.8 bits (94), Expect = 6e-05
 Identities = 26/166 (15%), Positives = 42/166 (25%), Gaps = 33/166 (19%)

Query: 25  GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGV 84
           G   L+   F        ++ V  KA+GI                    P  +G E AG+
Sbjct: 11  GPEVLQAVEFTPADPAENEIQVENKAIGIN---FIDTYIRSGLYPPPSLPSGLGTEAAGI 67

Query: 85  IEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVH 144
           + KV                            G R                   ++    
Sbjct: 68  VSKV-------------------GSGVKHIKAGDRVVYAQSALGA--------YSSVHNI 100

Query: 145 PADLCFKLPDNVSLEEG-AMCEPLSVGL--HACRRANIGPETNVLI 187
            AD    LP  + ++       PL      H    +     +++LI
Sbjct: 101 IADKAAILPAAIKVDVAEQQKYPLKDAQRAHEILESRATQGSSLLI 146

>d1gu7a1 b.35.1.2 (A:23-160,A:350-386) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]} Length = 175

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

 Score = 40.9 bits (94), Expect = 6e-05
 Identities = 18/175 (10%), Positives = 40/175 (22%), Gaps = 21/175 (12%)

Query: 26  VNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVI 85
           V   +    +  +L P +V+V+     +  SD++ ++ +  +              A   
Sbjct: 18  VLFTQSFEIDDDNLAPNEVIVKTLGSPVNPSDINQIQGVYPSKPAKTTGFGTTEPAAPC- 76

Query: 86  EKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHP 145
                                   +          +L        +    G+     +  
Sbjct: 77  -------------------GNEGLFEVIKVGSNVSSLEAGDWVIPSHVNFGTWRTHALGN 117

Query: 146 ADLCFKLPDNVSLEEGAMCEPLSVGLHACR-RANIGPETNVLIMGAGPIGLVTML 199
            D   KLP+    +       L+             P   +   G         L
Sbjct: 118 DDDFIKLPNPAQSKANGKPNGLTDAKSIETLYDGTKPLHELYQDGVANSKDGKQL 172

>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]} Length = 174

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.5 bits (88), Expect = 4e-04
 Identities = 31/174 (17%), Positives = 61/174 (35%), Gaps = 11/174 (6%)

Query: 157 SLEEGA-MCEPLSVGLHA-CRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDV 214
             ++GA +  P      A    A +    +VL+ GA     +           +I+    
Sbjct: 2   DFKQGAAIGIPYFTAYRALIHSACVKAGESVLVHGASGGVGLAACQIARAYGLKILGTAG 61

Query: 215 DDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSA 274
            +    +  + GA  +             ++KI+K +G            N  +S  LS 
Sbjct: 62  TEEGQKIVLQNGAHEVFN-----HREVNYIDKIKKYVGEKGIDIIIEMLANVNLSKDLSL 116

Query: 275 TRAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKNT---WPLCLELLRSG 325
              GG+V +VG     + +       +E  ++GV  + +T   +      L++G
Sbjct: 117 LSHGGRVIVVGSR-GTIEINPRDTMAKESSIIGVTLFSSTKEEFQQYAAALQAG 169

>d1yb5a1 b.35.1.2 (A:6-120,A:295-329) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]} Length = 150

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.7 bits (86), Expect = 6e-04
 Identities = 22/104 (21%), Positives = 40/104 (38%), Gaps = 3/104 (2%)

Query: 25  GVNTLKIQP-FELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAG 83
           G   LK++    +P    + VL+++ A G+   + +          ++      G + AG
Sbjct: 13  GPEVLKLRSDIAVPIPKDHQVLIKVHACGVNPVETYIRSGTYSRKPLLPYTP--GSDVAG 70

Query: 84  VIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMK 127
           VIE VG        GDRV     IS    ++     + +    +
Sbjct: 71  VIEAVGDNASAFKKGDRVFTSSTISGGYAEYALAADHTVYKLPE 114

>d1iz0a1 b.35.1.2 (A:1-98,A:270-302) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]} Length = 131

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

 Score = 36.0 bits (82), Expect = 0.002
 Identities = 24/162 (14%), Positives = 41/162 (25%), Gaps = 45/162 (27%)

Query: 29  LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
           L++     P     +V++R++AVG+  +D                P + G E  GV    
Sbjct: 13  LELVDLPEPEAEEGEVVLRVEAVGLNFADHLMRLGAYLTRL--HPPFIPGMEVVGV---- 66

Query: 89  GSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADL 148
                                                          G LA +V  P   
Sbjct: 67  ---------------------VEGRRYAALVP--------------QGGLAERVAVPKGA 91

Query: 149 CFKLPDNVSLEEGA-MCEPLSVGLHAC-RRANIGPETNVLIM 188
              LP+   +               A   R + G +  V+ +
Sbjct: 92  LLPLPEGRPVVGPVFPFAEAEAAFRALLDRGHTG-KV-VVRL 131

>d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]} Length = 167

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

 Score = 35.7 bits (81), Expect = 0.003
 Identities = 29/165 (17%), Positives = 61/165 (36%), Gaps = 11/165 (6%)

Query: 170 GLHACRRANIGPE-TNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGA 227
            +H   +  + PE  +VL+ GA G +G + +      G   +      +    + +   +
Sbjct: 11  SVHRLEQNGLSPEKGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYLKQLGAS 70

Query: 228 DNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGK-VCLVGM 286
           + I     + +D+ +   K           + D  G  K +++ LS  + GG        
Sbjct: 71  EVI-----SREDVYDGTLKAL--SKQQWQGAVDPVG-GKQLASLLSKIQYGGSVAVSGLT 122

Query: 287 GHHEMTVPLTPAAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKP 331
           G  E+   + P  +R V ++G+        +   +      D+KP
Sbjct: 123 GGGEVPATVYPFILRGVSLLGIDSVYCPMDVRAAVWERMSSDLKP 167

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	364
d1e3ja1	178	Ketose reductase (sorbitol dehydrogenase) {Silverl	100.0
d1pl8a1	185	Ketose reductase (sorbitol dehydrogenase) {Human (	100.0
d1h2ba1	171	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	100.0
d1llua1	175	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	99.98
d1f8fa1	194	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	99.97
d1vj0a1	184	Hypothetical protein TM0436 {Thermotoga maritima [	99.97
d1cdoa1	199	Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI	99.97
d1piwa1	192	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	99.97
d1e3ia1	202	Alcohol dehydrogenase {Mouse (Mus musculus), class	99.97
d1jvba1	177	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	99.97
d1rjwa1	171	Alcohol dehydrogenase {Bacillus stearothermophilus	99.97
d2fzwa1	197	Alcohol dehydrogenase {Human (Homo sapiens), diffe	99.97
d1kola1	201	Formaldehyde dehydrogenase {Pseudomonas putida [Ta	99.96
d1uufa1	179	Hypothetical protein YahK {Escherichia coli [TaxId	99.96
d1pl8a2	171	Ketose reductase (sorbitol dehydrogenase) {Human (	99.96
d1jqba1	177	Bacterial secondary alcohol dehydrogenase {Clostri	99.96
d1e3ja2	170	Ketose reductase (sorbitol dehydrogenase) {Silverl	99.96
d1yb5a1	150	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	99.95
d1p0fa1	198	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	99.95
d2jhfa1	198	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	99.95
d1qora1	147	Quinone oxidoreductase {Escherichia coli [TaxId: 5	99.94
d1xa0a1	152	B. subtilis YhfP homologue {Bacillus stearothermop	99.93
d1jqba2	174	Bacterial secondary alcohol dehydrogenase {Clostri	99.93
d1jvba2	170	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	99.93
d1f8fa2	174	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	99.92
d1yb5a2	174	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	99.92
d1iz0a1	131	Quinone oxidoreductase {Thermus thermophilus [TaxI	99.91
d1e3ia2	174	Alcohol dehydrogenase {Mouse (Mus musculus), class	99.91
d1llua2	166	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	99.91
d1p0fa2	174	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	99.91
d1pqwa_	183	Putative enoyl reductase domain of polyketide synt	99.91
d2fzwa2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	99.91
d1h2ba2	172	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	99.91
d1vj0a2	182	Hypothetical protein TM0436 {Thermotoga maritima [	99.9
d1rjwa2	168	Alcohol dehydrogenase {Bacillus stearothermophilus	99.9
d1xa0a2	176	B. subtilis YhfP homologue {Bacillus stearothermop	99.9
d1v3va2	182	Leukotriene b4 12-hydroxydehydrogenase/prostagland	99.9
d1gu7a2	189	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	99.9
d1piwa2	168	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	99.9
d1o89a1	146	Hypothetical protein YhdH {Escherichia coli [TaxId	99.89
d1gu7a1	175	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	99.89
d1qora2	179	Quinone oxidoreductase {Escherichia coli [TaxId: 5	99.89
d1tt7a1	162	Hypothetical protein YhfP {Bacillus subtilis [TaxI	99.89
d1iz0a2	171	Quinone oxidoreductase {Thermus thermophilus [TaxI	99.89
d1uufa2	168	Hypothetical protein YahK {Escherichia coli [TaxId	99.88
d2jhfa2	176	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	99.88
d1cdoa2	175	Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI	99.88
d1kola2	195	Formaldehyde dehydrogenase {Pseudomonas putida [Ta	99.87
d1d1ta2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	99.87
d1vj1a2	187	Putative zinc-binding alcohol dehydrogenase {Mouse	99.86
d1o89a2	177	Hypothetical protein YhdH {Escherichia coli [TaxId	99.81
d1tt7a2	167	Hypothetical protein YhfP {Bacillus subtilis [TaxI	99.8
d1vj1a1	166	Putative zinc-binding alcohol dehydrogenase {Mouse	99.63
d1v3va1	147	Leukotriene b4 12-hydroxydehydrogenase/prostagland	99.61
d1o8ca2	77	Hypothetical protein YhdH {Escherichia coli [TaxId	99.41
d1pjca1	168	L-alanine dehydrogenase {Phormidium lapideum [TaxI	98.12
d1l7da1	183	Nicotinamide nucleotide transhydrogenase dI compon	98.06
d1dl5a1	213	Protein-L-isoaspartyl O-methyltransferase {Thermot	97.73
d1jg1a_	215	Protein-L-isoaspartyl O-methyltransferase {Archaeo	97.7
d1o54a_	266	Hypothetical protein TM0748 {Thermotoga maritima [	97.63
d2d1ya1	248	Hypothetical protein TTHA0369 {Thermus thermophilu	97.56
d1yb2a1	250	Hypothetical protein Ta0852 {Thermoplasma acidophi	97.5
d1npya1	167	Shikimate 5-dehydrogenase-like protein HI0607 {Hae	97.43
d1vbfa_	224	Protein-L-isoaspartyl O-methyltransferase {Sulfolo	97.4
d1gpja2	159	Glutamyl tRNA-reductase middle domain {Archaeon Me	97.34
d1i1na_	224	Protein-L-isoaspartyl O-methyltransferase {Human (	97.29
d1q7ba_	243	beta-keto acyl carrier protein reductase {Escheric	97.2
d1kpia_	291	CmaA2 {Mycobacterium tuberculosis [TaxId: 1773]}	97.18
d1ulsa_	242	beta-keto acyl carrier protein reductase {Thermus	97.16
d1i9ga_	264	Probable methyltransferase Rv2118c {Mycobacterium	97.13
d1vl8a_	251	Gluconate 5-dehydrogenase {Thermotoga maritima [Ta	97.12
d1ae1a_	258	Tropinone reductase {Jimsonweed (Datura stramonium	97.11
d1ydea1	250	Retinal dehydrogenase/reductase 3 {Human (Homo sap	97.05
d1r18a_	223	Protein-L-isoaspartyl O-methyltransferase {Fruit f	97.03
d1pjqa1	113	Siroheme synthase CysG, domain 1 {Salmonella typhi	96.95
d1ja9a_	259	1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl	96.94
d2ag5a1	245	Dehydrogenase/reductase SDR family member 6, DHRS6	96.94
d2ae2a_	259	Tropinone reductase {Jimsonweed (Datura stramonium	96.93
d1wmaa1	275	Carbonyl reductase/20beta-hydroxysteroid dehydroge	96.92
d2b25a1	324	Hypothetical protein FLJ20628 {Human (Homo sapiens	96.92
d1kpga_	285	CmaA1 {Mycobacterium tuberculosis [TaxId: 1773]}	96.91
d1xq1a_	259	Tropinone reductase {Thale cress (Arabidopsis thal	96.9
d1luaa1	191	Methylene-tetrahydromethanopterin dehydrogenase {M	96.89
d1pr9a_	244	Carbonyl reductase {Human (Homo sapiens) [TaxId: 9	96.87
d1w6ua_	294	2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H	96.81
d1gz6a_	302	(3R)-hydroxyacyl-CoA dehydrogenase domain of estra	96.79
d1yb1a_	244	17-beta-hydroxysteroid dehydrogenase type XI {Huma	96.78
d1zema1	260	Xylitol dehydrogenase {Gluconobacter oxydans [TaxI	96.78
d1dhra_	236	Dihydropteridin reductase (pteridine reductase) {R	96.77
d1sbya1	254	Drosophila alcohol dehydrogenase {Fly (Drosophila	96.77
d1nffa_	244	Putative oxidoreductase Rv2002 {Mycobacterium tube	96.77
d2bgka1	268	Rhizome secoisolariciresinol dehydrogenase {Mayapp	96.76
d1k2wa_	256	Sorbitol dehydrogenase {Rhodobacter sphaeroides [T	96.74
d1hxha_	253	3beta/17beta hydroxysteroid dehydrogenase {Comamon	96.74
d1cyda_	242	Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1	96.74
d1nkva_	245	Hypothetical Protein YjhP {Escherichia coli [TaxId	96.72
d2fk8a1	280	Methoxy mycolic acid synthase 4, Mma4 {Mycobacteri	96.72
d1g0oa_	272	1,3,8-trihydroxynaphtalene reductase (THNR, naphto	96.72
d1xg5a_	257	Putative dehydrogenase ARPG836 (MGC4172) {Human (H	96.67
d1yo6a1	250	Putative carbonyl reductase sniffer {Caenorhabditi	96.67
d1iy8a_	258	Levodione reductase {Corynebacterium aquaticum [Ta	96.66
d1xu9a_	269	11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom	96.62
d2avna1	246	Hypothetical methyltransferase TM1389 {Thermotoga	96.61
d1zk4a1	251	R-specific alcohol dehydrogenase {Lactobacillus br	96.6
d1xxla_	234	Hypothetical protein YcgJ {Bacillus subtilis [TaxI	96.59
d1fmca_	255	7-alpha-hydroxysteroid dehydrogenase {Escherichia	96.57
d1bdba_	276	Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps	96.52
d2gdza1	254	15-hydroxyprostaglandin dehydrogenase, PGDH {Human	96.5
d1ulua_	256	Enoyl-ACP reductase {Thermus thermophilus [TaxId:	96.48
d1hdca_	254	3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre	96.48
d1nw3a_	328	Catalytic, N-terminal domain of histone methyltran	96.48
d2ew8a1	247	(s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb	96.46
d1nyta1	170	Shikimate 5-dehydrogenase AroE {Escherichia coli [	96.46
d1o5ia_	234	beta-keto acyl carrier protein reductase {Thermoto	96.46
d1geea_	261	Glucose dehydrogenase {Bacillus megaterium [TaxId:	96.43
d1nt2a_	209	Fibrillarin homologue {Archaeon Archaeoglobus fulg	96.41
d1xhla_	274	Hypothetical protein F25D1.5 {Caenorhabditis elega	96.39
d1u2za_	406	Catalytic, N-terminal domain of histone methyltran	96.39
d1edoa_	244	beta-keto acyl carrier protein reductase {Oil seed	96.36
d1xkqa_	272	Hypothetical protein R05D8.7 {Caenorhabditis elega	96.35
d1h5qa_	260	Mannitol dehydrogenase {Mushroom (Agaricus bisporu	96.32
d2nxca1	254	PrmA-like protein TTHA0656 (TT0836) {Thermus therm	96.32
d2a4ka1	241	beta-keto acyl carrier protein reductase {Thermus	96.31
d1ooea_	235	Dihydropteridin reductase (pteridine reductase) {N	96.31
d1vl5a_	231	Hypothetical protein BH2331 {Bacillus halodurans [	96.31
d1yxma1	297	Peroxisomal trans 2-enoyl CoA reductase {Human (Ho	96.28
d2o57a1	282	Putative sarcosine dimethylglycine methyltransfera	96.28
d2rhca1	257	beta-keto acyl carrier protein reductase {Streptom	96.28
d1pjza_	201	Thiopurine S-methyltransferase {Pseudomonas syring	96.26
d1bg6a2	184	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A	96.23
d1uzma1	237	beta-keto acyl carrier protein reductase {Mycobact	96.22
d2c07a1	251	beta-keto acyl carrier protein reductase {Malaria	96.17
d1l3ia_	186	Precorrin-6Y methyltransferase (CbiT) {Archaeon Me	96.15
d1g8aa_	227	Fibrillarin homologue {Archaeon Pyrococcus horikos	96.15
d1zx0a1	229	Guanidinoacetate methyltransferase {Human (Homo sa	96.14
d1hdoa_	205	Biliverdin IX beta reductase {Human (Homo sapiens)	96.12
d1spxa_	264	Glucose dehydrogenase (5l265) {Nematode (Caenorhab	96.11
d1zmta1	252	Halohydrin dehalogenase HheC {Agrobacterium tumefa	96.09
d2bd0a1	240	Bacterial sepiapterin reductase {Chlorobium tepidu	96.04
d1gega_	255	meso-2,3-butanediol dehydrogenase {Klebsiella pneu	95.98
d1g8sa_	230	Fibrillarin homologue {Archaeon Methanococcus jann	95.92
d1lssa_	132	Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax	95.86
d1e5qa1	182	Saccharopine reductase {Rice blast fungus (Magnapo	95.84
d2pd4a1	274	Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2	95.78
d1x1ta1	260	D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas	95.74
d1vi2a1	182	Putative shikimate dehydrogenase YdiB {Escherichia	95.74
d1ve3a1	226	Hypothetical protein PH0226 {Archaeon Pyrococcus h	95.53
d2f1ka2	165	Prephenate dehydrogenase TyrA {Synechocystis sp. p	95.46
d2fr1a1	259	Erythromycin synthase, eryAI, 1st ketoreductase mo	95.34
d1qsga_	258	Enoyl-ACP reductase {Escherichia coli [TaxId: 562]	95.3
d1iy9a_	274	Spermidine synthase {Bacillus subtilis [TaxId: 142	95.29
d2hmva1	134	Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}	95.25
d2bzga1	229	Thiopurine S-methyltransferase {Human (Homo sapien	95.25
d1li4a1	163	S-adenosylhomocystein hydrolase {Human (Homo sapie	95.21
d1xj5a_	290	Spermidine synthase {Thale cress (Arabidopsis thal	95.15
d2g5ca2	171	Prephenate dehydrogenase TyrA {Aquifex aeolicus [T	95.12
d1p77a1	171	Shikimate 5-dehydrogenase AroE {Haemophilus influe	95.03
d1uira_	312	Spermidine synthase {Thermus thermophilus [TaxId:	95.0
d1snya_	248	Carbonyl reductase sniffer {Fruit fly (Drosophila	94.98
d2as0a2	324	Hypothetical protein PH1915, middle and C-terminal	94.97
d2o23a1	248	Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho	94.96
d1yqga2	152	Pyrroline-5-carboxylate reductase ProC {Neisseria	94.95
d2czca2	172	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	94.86
d1wzna1	251	Hypothetical methyltransferase PH1305 {Archaeon Py	94.73
d1p91a_	268	rRNA methyltransferase RlmA {Escherichia coli [Tax	94.61
d2jfga1	93	UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase	94.53
d1susa1	227	Caffeoyl-CoA O-methyltransferase {Alfalfa (Medicag	94.46
d2o07a1	285	Spermidine synthase {Human (Homo sapiens) [TaxId:	94.4
d1jtva_	285	Human estrogenic 17beta-hydroxysteroid dehydrogena	94.35
d1mxha_	266	Dihydropteridin reductase (pteridine reductase) {T	94.28
d2b2ca1	312	Spermidine synthase {Caenorhabditis elegans [TaxId	94.22
d2frna1	260	Hypothetical protein PH0793 {Pyrococcus horikoshii	94.18
d1wxxa2	318	Hypothetical protein TTHA1280, middle and C-termin	94.17
d1vpda2	161	Hydroxyisobutyrate dehydrogenase {Salmonella typhi	94.17
d1mjfa_	276	Putative spermidine synthetase PF0127 (SpeE) {Arch	94.05
d1c1da1	201	Phenylalanine dehydrogenase {Rhodococcus sp., M4 [	94.04
d2h7ma1	268	Enoyl-ACP reductase {Mycobacterium tuberculosis, T	93.93
d1j5pa4	132	Hypothetical protein TM1643 {Thermotoga maritima [	93.91
d1gtea4	196	Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su	93.83
d1jbqa_	355	Cystathionine beta-synthase {Human (Homo sapiens)	93.82
d1im8a_	225	Hypothetical protein HI0319 (YecO) {Haemophilus in	93.72
d1r0ka2	150	1-deoxy-D-xylulose-5-phosphate reductoisomerase {Z	93.66
d1e7wa_	284	Dihydropteridin reductase (pteridine reductase) {L	93.64
d1inla_	295	Spermidine synthase {Thermotoga maritima [TaxId: 2	93.43
d1cf2o1	171	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	93.31
d2q46a1	252	Hypothetical protein At5g02240 (T7H20_290) {Thale	93.28
d1ks9a2	167	Ketopantoate reductase PanE {Escherichia coli [Tax	93.24
d1v8ba1	163	S-adenosylhomocystein hydrolase {Plasmodium falcip	93.1
d2fyta1	311	Protein arginine N-methyltransferase 3, PRMT3 {Hum	93.08
d2ahra2	152	Pyrroline-5-carboxylate reductase ProC {Streptococ	93.07
d3cuma2	162	Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru	92.94
d1nvmb1	157	Acetaldehyde dehydrogenase (acylating) {Pseudomona	92.93
d1dusa_	194	Hypothetical protein MJ0882 {Archaeon Methanococcu	92.82
d2bhsa1	292	O-acetylserine sulfhydrylase (Cysteine synthase) {	92.75
d2i6ga1	198	Putative methyltransferase TehB {Salmonella typhim	92.62
d1b7go1	178	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	92.62
d1sqga2	284	Ribosomal RNA small subunit methyltransferase B, R	92.61
d1j4aa1	197	D-lactate dehydrogenase {Lactobacillus helveticus	92.59
d1vm6a3	128	Dihydrodipicolinate reductase {Thermotoga maritima	92.44
d1zh8a1	181	Hypothetical protein TM0312 {Thermotoga maritima [	92.38
d1yl7a1	135	Dihydrodipicolinate reductase {Mycobacterium tuber	92.37
d1xvaa_	292	Glycine N-methyltransferase {Rat (Rattus norvegicu	92.35
d1y1pa1	342	Aldehyde reductase II {Sporobolomyces salmonicolor	92.34
d1y8ca_	246	Putative methyltransferase CAC2371 {Clostridium ac	92.26
d1kjqa2	111	Glycinamide ribonucleotide transformylase PurT, N-	92.12
d1ydwa1	184	Probable oxidoreductase At4g09670 {Thale cress (Ar	91.95
d1fcja_	302	O-acetylserine sulfhydrylase (Cysteine synthase) {	91.95
d2avda1	219	COMT domain-containing protein 1, COMTD1 {Human (H	91.74
d1ixka_	313	Hypothetical methyltransferase PH1374 {Archaeon Py	91.74
d1orra_	338	CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId:	91.73
d1fjha_	257	3-alpha-hydroxysteroid dehydrogenase {Comamonas te	91.71
d1udca_	338	Uridine diphosphogalactose-4-epimerase (UDP-galact	91.62
d1rkxa_	356	CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc	91.57
d2voua1	265	Dihydroxypyridine hydroxylase DhpH {Arthrobacter n	91.49
d1jw9b_	247	Molybdenum cofactor biosynthesis protein MoeB {Esc	91.44
d1y7la1	310	O-acetylserine sulfhydrylase (Cysteine synthase) {	91.29
d1q0qa2	151	1-deoxy-D-xylulose-5-phosphate reductoisomerase {E	91.27
d2bkaa1	232	TAT-interacting protein TIP30 {Human (Homo sapiens	91.22
d1d7oa_	297	Enoyl-ACP reductase {Oil seed rape (Brassica napus	91.22
d1oria_	316	Protein arginine N-methyltransferase 1, PRMT1 {Rat	91.22
d1ps9a3	179	2,4-dienoyl-CoA reductase, middle domain {Escheric	91.19
d1mo9a2	121	NADH-dependent 2-ketopropyl coenzyme M oxidoreduct	91.08
d2fcaa1	204	tRNA (guanine-N(7)-)-methyltransferase TrmB {Bacil	90.87
d2b78a2	317	Hypothetical protein SMu776, middle and C-terminal	90.85
d1seza1	373	Protoporphyrinogen oxidase {Tobacco (Nicotiana tab	90.84
d1i24a_	393	Sulfolipid biosynthesis protein SQD1 {Thale cress	90.83
d1ri5a_	252	mRNA cap (Guanine N-7) methyltransferase {Fungus (	90.77
d1xeaa1	167	Putative oxidoreductase VCA1048 {Vibrio cholerae [	90.66
d1oaaa_	259	Sepiapterin reductase {Mouse (Mus musculus) [TaxId	90.52
d1leha1	230	Leucine dehydrogenase {Bacillus sphaericus [TaxId:	90.43
d2gh1a1	281	Methyltransferase BC2162 {Bacillus cereus [TaxId:	90.29
d3etja2	78	N5-carboxyaminoimidazole ribonucleotide synthetase	90.15
d1p3da1	96	UDP-N-acetylmuramate-alanine ligase MurC {Haemophi	90.01
d2naca1	188	Formate dehydrogenase {Pseudomonas sp., strain 101	89.94
d1nhpa2	123	NADH peroxidase {Enterococcus faecalis [TaxId: 135	89.89
d1g6q1_	328	Arginine methyltransferase, HMT1 {Baker's yeast (S	89.84
d3c96a1	288	Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId:	89.77
d2p7ia1	225	Hypothetical protein ECA1738 {Erwinia carotovora [	89.66
d2c5aa1	363	GDP-mannose-3', 5'-epimerase {Thale cress (Arabido	89.49
d1tlta1	164	Virulence factor MviM {Escherichia coli [TaxId: 56	89.47
d1djqa3	233	Trimethylamine dehydrogenase, middle domain {Methy	89.3
d2ex4a1	222	Adrenal gland protein AD-003 (C9orf32) {Human (Hom	89.15
d1b5qa1	347	Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}	89.15
d1xtpa_	254	Hypothetical protein Lmaj004091aaa (LmjF30.0810) {	89.09
d1id1a_	153	Rck domain from putative potassium channel Kch {Es	88.99
d2blla1	342	Polymyxin resistance protein ArnA (PrmI) {Escheric	88.94
d2dula1	375	N(2),N(2)-dimethylguanosine tRNA methyltransferase	88.94
d1tw3a2	253	Carminomycin 4-O-methyltransferase {Streptomyces p	88.73
d1gdha1	191	D-glycerate dehydrogenase {Hyphomicrobium methylov	88.49
d1qyda_	312	Pinoresinol-lariciresinol reductase {Giant arborvi	88.29
d1onfa2	117	Glutathione reductase {Plasmodium falciparum [TaxI	88.17
d1nvta1	177	Shikimate 5-dehydrogenase AroE {Archaeon Methanoco	88.17
d1j6ua1	89	UDP-N-acetylmuramate-alanine ligase MurC {Thermoto	88.06
d2iida1	370	L-aminoacid oxidase {Malayan pit viper (Calloselas	88.01
d1gtea3	153	Dihydropyrimidine dehydrogenase, domain 3 {Pig (Su	88.0
d1z7wa1	320	O-acetylserine sulfhydrylase (Cysteine synthase) {	87.99
d1mlda1	144	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	87.98
d1tdja1	331	Threonine deaminase {Escherichia coli [TaxId: 562]	87.92
d1uh5a_	329	Enoyl-ACP reductase {Malaria parasite (Plasmodium	87.82
d1f0ya2	192	Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum	87.58
d1ebda2	117	Dihydrolipoamide dehydrogenase {Bacillus stearothe	87.46
d1v71a1	318	Hypothetical protein C320.14 (SPCC320.14, SPCC330.	87.38
d1v9la1	242	Glutamate dehydrogenase {Pyrobaculum islandicum [T	87.22
d1z45a2	347	Uridine diphosphogalactose-4-epimerase (UDP-galact	86.88
d1kewa_	361	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	86.72
d1db3a_	357	GDP-mannose 4,6-dehydratase {Escherichia coli [Tax	86.5
d1wkva1	382	O-acetylserine sulfhydrylase (Cysteine synthase) {	86.5
d1uaya_	241	Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t	86.48
d2bi7a1	314	UDP-galactopyranose mutase, N-terminal domain {Kle	86.47
d1d7ya2	121	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	86.42
d1k0ia1	292	p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas a	86.17
d2dw4a2	449	Lysine-specific histone demethylase 1, LSD1 {Human	86.15
d3lada2	119	Dihydrolipoamide dehydrogenase {Azotobacter vinela	85.91
d1gesa2	116	Glutathione reductase {Escherichia coli [TaxId: 56	85.91
d1p5ja_	319	L-serine dehydratase {Human (Homo sapiens) [TaxId:	85.79
d1n7ha_	339	GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop	85.76
d1vlma_	208	Possible histamine N-methyltransferase TM1293 {The	85.61
d1xgka_	350	Negative transcriptional regulator NmrA {Aspergill	85.58
d1jqea_	280	Histamine methyltransferase {Human (Homo sapiens)	85.47
d1n1ea2	189	Glycerol-3- phosphate dehydrogenase {Trypanosome (	85.42
d2b69a1	312	UDP-glucuronate decarboxylase 1 {Human (Homo sapie	84.99
d1dxya1	199	D-2-hydroxyisocaproate dehydrogenase {Lactobacillu	84.94
d1yzha1	204	tRNA (guanine-N(7)-)-methyltransferase TrmB {Strep	84.88
d1v59a2	122	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	84.78
d2esra1	152	Putative methyltransferase SPy1538 {Streptococcus	84.72
d2nvwa1	237	Galactose/lactose metabolism regulatory protein GA	84.68
d1jaya_	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae	84.67
d1qyca_	307	Phenylcoumaran benzylic ether reductase {Loblolly	84.56
d1dssg1	169	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	84.44
d1f06a1	170	Diaminopimelic acid dehydrogenase (DAPDH) {Coryneb	84.44
d1c0pa1	268	D-aminoacid oxidase, N-terminal domain {Rhodotorul	84.41
d1ws6a1	171	Methyltransferase TTHA0928 {Thermus thermophilus [	84.37
d1fcda1	186	Flavocytochrome c sulfide dehydrogenase, FCSD, fla	84.28
d2i76a2	153	Hypothetical protein TM1727 {Thermotoga maritima [	84.14
d1h6da1	221	Glucose-fructose oxidoreductase, N-terminal domain	84.07
d1q1ra2	133	Putidaredoxin reductase {Pseudomonas putida [TaxId	84.05
d2gqfa1	253	Hypothetical protein HI0933 {Haemophilus influenza	84.01
d1qp8a1	181	Putative formate dehydrogenase {Archaeon Pyrobacul	83.93
d1diha1	162	Dihydrodipicolinate reductase {Escherichia coli [T	83.74
d1rpna_	321	GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos	83.68
d1fl2a1	184	Alkyl hydroperoxide reductase subunit F (AhpF), C-	83.12
d1kyqa1	150	Bifunctional dehydrogenase/ferrochelatase Met8p, N	83.08
d2i0za1	251	Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]	83.02
d1mx3a1	193	Transcription corepressor CtbP {Human (Homo sapien	82.78
d1qopb_	390	Tryptophan synthase, beta-subunit {Salmonella typh	82.77
d1ek6a_	346	Uridine diphosphogalactose-4-epimerase (UDP-galact	82.63
d1lvla2	115	Dihydrolipoamide dehydrogenase {Pseudomonas putida	82.59
d1h6va2	122	Mammalian thioredoxin reductase {Rat (Rattus norve	82.58
d2pgda2	176	6-phosphogluconate dehydrogenase {Sheep (Ovis orie	82.5
d2cl5a1	214	Catechol O-methyltransferase, COMT {Rat (Rattus no	82.44
d1o58a_	293	O-acetylserine sulfhydrylase (Cysteine synthase) {	82.43
d1hwxa1	293	Glutamate dehydrogenase {Cow (Bos taurus) [TaxId:	82.39
d2bcgg1	297	Guanine nucleotide dissociation inhibitor, GDI {Ba	82.32
d1ojta2	125	Dihydrolipoamide dehydrogenase {Neisseria meningit	82.24
d1trba1	190	Thioredoxin reductase {Escherichia coli [TaxId: 56	82.19
d1ldna1	148	Lactate dehydrogenase {Bacillus stearothermophilus	82.17
d1jsxa_	207	Glucose-inhibited division protein B (GidB) {Esche	82.15
d1dxla1	221	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	82.02
d2ivda1	347	Protoporphyrinogen oxidase {Myxococcus xanthus [Ta	82.0
d1i36a2	152	Conserved hypothetical protein MTH1747 {Archaeon M	81.98
d1wdka3	186	Fatty oxidation complex alpha subunit, middle doma	81.93
d1vl0a_	281	DTDP-4-dehydrorhamnose reductase RfbD {Clostridium	81.89
d3grsa2	125	Glutathione reductase {Human (Homo sapiens) [TaxId	81.58
d1pzga1	154	Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5	81.43
d1ygya1	184	Phosphoglycerate dehydrogenase {Mycobacterium tube	81.41
d1lssa_	132	Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax	81.23
d1dxla2	123	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	80.93
d1bgva1	255	Glutamate dehydrogenase {Clostridium symbiosum [Ta	80.74
d2g72a1	263	Phenylethanolamine N-methyltransferase, PNMTase {H	80.69
d1i8ta1	298	UDP-galactopyranose mutase, N-terminal domain {Esc	80.67
d1d5ta1	336	Guanine nucleotide dissociation inhibitor, GDI {Co	80.46
d1qzza2	256	Aclacinomycin-10-hydroxylase RdmB {Streptomyces pu	80.26
d1vdca1	192	Thioredoxin reductase {Mouse-ear cress (Arabidopsi	80.22
d1w4xa1	298	Phenylacetone monooxygenase {Thermobifida fusca [T	80.13
d1q1ra1	185	Putidaredoxin reductase {Pseudomonas putida [TaxId	80.06

>d1e3ja1 b.35.1.2 (A:4-142,A:313-351) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=100.00  E-value=3e-37  Score=254.98  Aligned_cols=173  Identities=46%  Similarity=0.820  Sum_probs=161.8

Q ss_pred             ceeEEEecCCceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCCCCCCCCC
Q 017916           18 NMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVP   97 (364)
Q Consensus        18 ~~~~~~~~~~~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~   97 (364)
                      ++++++++++.|+++++|.|+++++||||||++++||++|++.+.+.+...+....|+++|||++|+|+++|+++++|++
T Consensus         2 ~maAVl~g~~~l~~~e~~~P~~~~~evlVkv~a~gic~sD~~~~~~~~~~~~~~~~p~i~GhE~~G~Vv~vG~~v~~~~~   81 (178)
T d1e3ja1           2 NLSAVLYKQNDLRLEQRPIPEPKEDEVLLQMAYVGICGSDVHYYEHGRIADFIVKDPMVIGHEASGTVVKVGKNVKHLKK   81 (178)
T ss_dssp             CEEEEEEETTEEEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHHSBSSSCBCCSCEECCCEEEEEEEEECTTCCSCCT
T ss_pred             ceEEEEEcCCcEEEEEeECCCCCCCEEEEEEEEEcccCchhhhhccCccccccccCCeeeccccceEEEecCcccCCCCC
Confidence            46777888999999999999999999999999999999999999887666666778999999999999999999999999


Q ss_pred             CCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCccchhhhh-hhHHHHHHHHH
Q 017916           98 GDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHACRR  176 (364)
Q Consensus        98 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~lP~~~~~~~aa~~~-~~~~a~~~l~~  176 (364)
                      ||||+..+...|..|+.|+.++.++|.+..+.+....+|+|+||+++++++++++|+++++++|+++. .+.|+|+++++
T Consensus        82 GdrV~~~~~~~~~~c~~c~~g~~~~c~~~~~~~~~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~~~~~~~ta~~a~~~  161 (178)
T d1e3ja1          82 GDRVAVEPGVPCRRCQFCKEGKYNLCPDLTFCATPPDDGNLARYYVHAADFCHKLPDNCNVKQLVTHSFKLEQTVDAFEA  161 (178)
T ss_dssp             TCEEEECCEECCSSSHHHHTTCGGGCTTCEETTBTTBCCSCBSEEEEEGGGEEECCTTCCCGGGEEEEEEGGGHHHHHHH
T ss_pred             CCEEEECcccccCCccccccCCccccccccceeccccccccceeeeecccceeeCCCCCCHHHHHHHHhHHHHHHHHHHH
Confidence            99999999999999999999999999999999888889999999999999999999999999988774 88999999999


Q ss_pred             cCCCCCCEEEEEcC
Q 017916          177 ANIGPETNVLIMGA  190 (364)
Q Consensus       177 ~~~~~g~~VLI~Ga  190 (364)
                      +++++|++|||+|+
T Consensus       162 ~~~~~g~~VlVig~  175 (178)
T d1e3ja1         162 ARKKADNTIKVMIS  175 (178)
T ss_dssp             HHHCCTTCSEEEEE
T ss_pred             hCCCCCCEEEEEcc
Confidence            99999999999975

>d1pl8a1 b.35.1.2 (A:1-145,A:317-356) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=8.2e-35  Score=241.42  Aligned_cols=171  Identities=45%  Similarity=0.773  Sum_probs=157.6

Q ss_pred             cceeEEEecCCceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCCCCCCCC
Q 017916           17 VNMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLV   96 (364)
Q Consensus        17 ~~~~~~~~~~~~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~   96 (364)
                      .+.++++.+++.++++++|+|+++++||+|||.+++||++|++.+.+.+.+.+...+|.++|||++|+|+++|+++++|+
T Consensus         7 ~~~a~V~~gp~~l~l~evp~P~p~~~eVlVkv~a~gic~sD~~~~~~~~~~~~~~~~p~i~GhE~~G~V~~vG~~v~~~~   86 (185)
T d1pl8a1           7 NNLSLVVHGPGDLRLENYPIPEPGPNEVLLRMHSVGICGSDVHYWEYGRIGNFIVKKPMVLGHEASGTVEKVGSSVKHLK   86 (185)
T ss_dssp             CCEEEEEEETTEEEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHHSEETTEECSSCEECCCEEEEEEEEECTTCCSCC
T ss_pred             CCEEEEEeCCCeEEEEEeECCCCCCCEEEEEEEEEEeeCchhhhhccccccccCCCCCeeeeeeeeeeEEEeccceeeec
Confidence            45689999999999999999999999999999999999999999988665555677899999999999999999999999


Q ss_pred             CCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCccchhhhhhhHHHHHHHHH
Q 017916           97 PGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRR  176 (364)
Q Consensus        97 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~lP~~~~~~~aa~~~~~~~a~~~l~~  176 (364)
                      +||||+..+...|..|.+|+.++.++|.+..+++....+|+|+||+++++++++++|+++++++|+++ ++++|+++++.
T Consensus        87 ~GdrV~~~~~~~cg~c~~c~~G~~~~c~~~~~~g~~~~~G~~aey~~~~~~~~~~lP~~~~~~~aa~~-pl~~a~~a~~~  165 (185)
T d1pl8a1          87 PGDRVAIEPGAPRENDEFCKMGRYNLSPSIFFCATPPDDGNLCRFYKHNAAFCYKLPDNVKPLVTHRF-PLEKALEAFET  165 (185)
T ss_dssp             TTCEEEECSEECSSCCHHHHTTCGGGCTTCEETTBTTBCCSCBSEEEEEGGGEEECCTTCGGGEEEEE-EGGGHHHHHHH
T ss_pred             ccccceecceeccccchhhccchhchhccceeeecccccccceEEEEEchHHEEECCCCCCHHHHHHH-HHHHHHHHHHH
Confidence            99999999999999999999999999999999998888999999999999999999999998887654 56678888888


Q ss_pred             cCCCCCCEEEEE
Q 017916          177 ANIGPETNVLIM  188 (364)
Q Consensus       177 ~~~~~g~~VLI~  188 (364)
                      .++++|++|||.
T Consensus       166 ~~~~~G~~VlIg  177 (185)
T d1pl8a1         166 FKKGLGLKIMLK  177 (185)
T ss_dssp             HHTTCCSEEEEE
T ss_pred             hCCCCCCEEEEE
Confidence            889999999994

>d1h2ba1 b.35.1.2 (A:17-154,A:327-359) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=100.00  E-value=5.9e-33  Score=227.01  Aligned_cols=167  Identities=29%  Similarity=0.500  Sum_probs=150.0

Q ss_pred             eeEEEecC-CceEEEEecCCCC-CCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCCCCCCCC
Q 017916           19 MAAWLLGV-NTLKIQPFELPSL-GPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLV   96 (364)
Q Consensus        19 ~~~~~~~~-~~~~~~~~~~p~~-~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~   96 (364)
                      ||+++... ++|++++++.|++ +++||||||+++++|++|++.+.|.+.......+|+++|||++|+|+++|+++++++
T Consensus         1 kA~~~~~~g~pl~i~~v~~P~~~~~~eVlVkv~a~gic~sD~~~~~g~~~~~~~~~~P~v~GhE~~G~V~~vG~~v~~~~   80 (171)
T d1h2ba1           1 KAARLHEYNKPLRIEDVDYPRLEGRFDVIVRIAGAGVCHTDLHLVQGMWHELLQPKLPYTLGHENVGYIEEVAEGVEGLE   80 (171)
T ss_dssp             CEEEESSTTSCCEEECCCCCCCBTTBCEEEEEEEEECCHHHHHHHHTTTHHHHCCCSSEECCCCEEEEEEEECTTCCSCC
T ss_pred             CEEEEEeCCCCCEEEEeeCCCCCCCCEEEEEEEecccceeeehccCCCcccccCCccccccceeeeeeeecccCCCCcCC
Confidence            46777764 4699999999986 689999999999999999999988665444467899999999999999999999999


Q ss_pred             CCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCccchh-hhhhhHHHHHHHH
Q 017916           97 PGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGA-MCEPLSVGLHACR  175 (364)
Q Consensus        97 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~lP~~~~~~~aa-~~~~~~~a~~~l~  175 (364)
                      +||||++.+...|..|..|..++.++|.+..+.+. ..+|+|+||+++++++++++|++++++.|+ ++.++.|+|++++
T Consensus        81 ~GdrV~~~~~~~cg~~~~c~~g~~~~c~~~~~~g~-~~~G~~aey~~v~~~~~~~iP~~~~~e~aa~~~~~~~ta~~al~  159 (171)
T d1h2ba1          81 KGDPVILHPAVTDGTCLACRAGEDMHCENLEFPGL-NIDGGFAEFMRTSHRSVIKLPKDVRVEVDIHKLDEINDVLERLE  159 (171)
T ss_dssp             TTCEEEECSCBCCSCSHHHHTTCGGGCTTCBCBTT-TBCCSSBSEEEECGGGEEECCTTCCCCEEEEEGGGHHHHHHHHH
T ss_pred             CCCEEEEcCccCCCCccccccccccccccccccee-ecccccceeeeehhhcceecCCCCCHHHHHHHHhHHHHHHHHHH
Confidence            99999999999999999999999999999887765 578999999999999999999999998666 4568999999998


Q ss_pred             HcCCCCCCEEEE
Q 017916          176 RANIGPETNVLI  187 (364)
Q Consensus       176 ~~~~~~g~~VLI  187 (364)
                      ++++ .|++|||
T Consensus       160 ~~~~-~G~~VlI  170 (171)
T d1h2ba1         160 KGEV-LGRAVLI  170 (171)
T ss_dssp             TTCC-SSEEEEE
T ss_pred             hcCC-CCCEEEe
Confidence            8888 8999998

>d1llua1 b.35.1.2 (A:2-143,A:310-342) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.98  E-value=3.2e-32  Score=224.06  Aligned_cols=172  Identities=28%  Similarity=0.396  Sum_probs=150.9

Q ss_pred             cchhcceeEEEecC-CceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCCC
Q 017916           13 DGEEVNMAAWLLGV-NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSE   91 (364)
Q Consensus        13 ~~~~~~~~~~~~~~-~~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~   91 (364)
                      +++++|+|+++.++ ++++++++|.|.+++|||+|||+++++|++|++.+.|.+..  ...+|.++|||++|+|+++|++
T Consensus         1 ~~P~tMkA~v~~~~g~pl~l~evp~P~~~~~evlVkv~a~gic~~D~~~~~G~~~~--~~~~P~i~GhE~~G~V~~~G~~   78 (175)
T d1llua1           1 TLPQTMKAAVVHAYGAPLRIEEVKVPLPGPGQVLVKIEASGVCHTDLHAAEGDWPV--KPPLPFIPGHEGVGYVAAVGSG   78 (175)
T ss_dssp             CCCSEEEEEEBCSTTSCCEEEEEECCCCCTTCEEEEEEEEECCHHHHHHHHTCSSS--CCCSSBCCCSCEEEEEEEECTT
T ss_pred             CcchhcEEEEEEeCCCCCEEEEeECCCCCCCEEEEEEEEecCcccchhhhccCccc--cccCCcCCCCcceEEEEEeCCC
Confidence            36788999999876 46999999999999999999999999999999999986532  3568999999999999999999


Q ss_pred             CCCCCCCCEEEEcCC-cCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCccchh-hhhhhHH
Q 017916           92 VKTLVPGDRVALEPG-ISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGA-MCEPLSV  169 (364)
Q Consensus        92 v~~~~~Gd~V~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~lP~~~~~~~aa-~~~~~~~  169 (364)
                      ++++++||||+..+. ..|..|.+|+.++.++|.+....+. ..+|+|+||+.+++++++++|++++++.++ ++..+.+
T Consensus        79 v~~~~~GdrV~~~~~~~~~g~~~~~~~g~~~~~~~~~~~G~-~~~gg~aey~~v~~~~~~~iPd~l~~~~a~~~~~~~~t  157 (175)
T d1llua1          79 VTRVKEGDRVGIPWLYTACGCCEHCLTGWETLCESQQNTGY-SVNGGYAEYVLADPNYVGILPKNVKATIHPGKLDDINQ  157 (175)
T ss_dssp             CCSCCTTCEEEECSEEECCSSSHHHHTTCGGGCTTCEEBTT-TBCCSSBSEEEECTTTSEECCTTCCCCEEEECGGGHHH
T ss_pred             ccccccCCEEEeccccccCCccccccCCccccccccccccc-ccccccceEEEechHHEEECCCCCChhHHHHHHhHHHH
Confidence            999999999987654 5699999999999999999888775 578999999999999999999999988766 4457888


Q ss_pred             HHHHHHHcCCCCCCEEEEE
Q 017916          170 GLHACRRANIGPETNVLIM  188 (364)
Q Consensus       170 a~~~l~~~~~~~g~~VLI~  188 (364)
                      +++.++...+ +|++|||+
T Consensus       158 ~~~~~~~g~~-~G~~VLVl  175 (175)
T d1llua1         158 ILDQMRAGQI-EGRIVLEM  175 (175)
T ss_dssp             HHHHHHTTCC-SSEEEEEC
T ss_pred             HHHHHHhCCC-CCCEEEeC
Confidence            8888876654 69999984

>d1f8fa1 b.35.1.2 (A:4-162,A:337-371) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=99.97  E-value=1e-31  Score=223.54  Aligned_cols=169  Identities=22%  Similarity=0.337  Sum_probs=143.2

Q ss_pred             hcceeEEEecC-CceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCCCCCC
Q 017916           16 EVNMAAWLLGV-NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT   94 (364)
Q Consensus        16 ~~~~~~~~~~~-~~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~   94 (364)
                      +.|+|+++... ++|+++++|.|+++++||||||.++++|++|++.+.|.+    ..++|+++|||++|+|+++|+++++
T Consensus         2 k~~~Aav~~~~g~~l~l~~v~~P~p~~geVlVkv~a~gic~sD~~~~~G~~----~~~~P~i~GHE~~G~V~~vG~~v~~   77 (194)
T d1f8fa1           2 KDIIAAVTPCKGADFELQALKIRQPQGDEVLVKVVATGMCHTDLIVRDQKY----PVPLPAVLGHEGSGIIEAIGPNVTE   77 (194)
T ss_dssp             EEEEEEEBCSTTCCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHTTSS----CCCSSBCCCCEEEEEEEEECTTCCS
T ss_pred             ceeEEEEEcCCCCCcEEEEeeCCCCCCCEEEEEEEEEEecCchHhhhhhcc----cccCCcccccceEEEeeecCcccee
Confidence            56788888854 679999999999999999999999999999999988754    3478999999999999999999999


Q ss_pred             CCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCC----------------------CCCcceeEEEecCCceEEC
Q 017916           95 LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPP----------------------VHGSLANQVVHPADLCFKL  152 (364)
Q Consensus        95 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------~~g~~~~~v~~~~~~~~~l  152 (364)
                      |++||||+.. ..+|.+|.+|+.+++++|++........                      ..|+|+||+++++.+++++
T Consensus        78 ~~vGDrVv~~-~~~Cg~C~~C~~g~~~~C~~~~~~~~~g~~~dg~~~~~~~~~~~~~~~~~~~g~fae~~~v~~~~~~~i  156 (194)
T d1f8fa1          78 LQVGDHVVLS-YGYCGKCTQCNTGNPAYCSEFFGRNFSGADSEGNHALCTHDQGVVNDHFFAQSSFATYALSRENNTVKV  156 (194)
T ss_dssp             CCTTCEEEEC-CCCCSSSHHHHTTCGGGCTTHHHHSSSSSCSSSCCSBC------CBCCGGGTCCSBSEEEEEGGGEEEE
T ss_pred             EccCceeeee-cccccCChhhhCCCcccccccccceeccccccceeeeecCCceeeccccccccccceeEEEehHHEEEC
Confidence            9999999554 5589999999999999998752221100                      1378999999999999999


Q ss_pred             CCCCCccchhhhhhhHHHHHHHHHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEE
Q 017916          153 PDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIV  212 (364)
Q Consensus       153 P~~~~~~~aa~~~~~~~a~~~l~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~  212 (364)
                      |++++++++                       +++.|+|.+|++|+|+|+.+|+..++++
T Consensus       157 p~~i~~~~~-----------------------~~i~g~g~~g~~aiq~a~~~g~~~iiaV  193 (194)
T d1f8fa1         157 TKDFPFDQL-----------------------VKFYAFDEINQAAIDSRKGITLKPIIKI  193 (194)
T ss_dssp             CTTCCGGGG-----------------------EEEEEGGGHHHHHHHHHHTSCSEEEEEC
T ss_pred             CCCCCcccE-----------------------EEEeCcHHHHHHHHHHHHHcCCCEEEEe
Confidence            999886543                       4456779999999999999999877765

>d1vj0a1 b.35.1.2 (A:2-155,A:338-367) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=99.97  E-value=9.8e-32  Score=221.07  Aligned_cols=167  Identities=26%  Similarity=0.455  Sum_probs=144.9

Q ss_pred             chhcceeEEEecC-CceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCCCC
Q 017916           14 GEEVNMAAWLLGV-NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEV   92 (364)
Q Consensus        14 ~~~~~~~~~~~~~-~~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v   92 (364)
                      |...++|+++..+ ++|++++++.|+++++||||||+++|||++|++.+.|.+..   ..+|+++|||++|+|+++|++|
T Consensus         1 m~~k~kA~v~~~~~~pl~i~ev~~P~~~~~evlVkv~a~gIC~sD~~~~~G~~~~---~~~P~vlGHE~~G~V~~vG~~v   77 (184)
T d1vj0a1           1 MGLKAHAMVLEKFNQPLVYKEFEISDIPRGSILVEILSAGVCGSDVHMFRGEDPR---VPLPIILGHEGAGRVVEVNGEK   77 (184)
T ss_dssp             CCEEEEEEEBCSTTSCCEEEEEEECCCCTTCEEEEEEEEEECHHHHHHHTTCCTT---CCSSBCCCCEEEEEEEEESSCC
T ss_pred             CCceEEEEEEecCCCCcEEEEeeCCCCCCCEEEEEEEEECCCCCchhheeccCCc---cccccccceeeeeeeeEEeccc
Confidence            4456789998876 56999999999999999999999999999999999886532   4689999999999999999988


Q ss_pred             C-----CCCCCCEEEEcCCcCCCCCccccCCC-CCCCCCccccccC-------CCCCcceeEEEec-CCceEECCCCCCc
Q 017916           93 K-----TLVPGDRVALEPGISCWRCDHCKGGR-YNLCPEMKFFATP-------PVHGSLANQVVHP-ADLCFKLPDNVSL  158 (364)
Q Consensus        93 ~-----~~~~Gd~V~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-------~~~g~~~~~v~~~-~~~~~~lP~~~~~  158 (364)
                      +     .+++||+|+..+..+|..|.+|+.++ .++|.++.+.+..       ..+|+|+||++++ +++++++|+++++
T Consensus        78 ~~~~~~~~~~Gd~V~~~~~~~Cg~C~~C~~g~~~~~c~~~~~~G~~~~~~~~~~~~Gg~ae~~~v~~~~~v~~ip~~l~~  157 (184)
T d1vj0a1          78 RDLNGELLKPGDLIVWNRGITCGECYWCKVSKEPYLCPNRKVYGINRGCSEYPHLRGCYSSHIVLDPETDVLKVSEKITH  157 (184)
T ss_dssp             BCTTSCBCCTTCEEEECSEECCSSSHHHHTSCCGGGCTTCEETTTTCCSSSTTCCCSSSBSEEEECTTCCEEEECTTCCE
T ss_pred             cccccccccceeeeEeccccccccChhHhCccccccCCCceeeccCCCCCCCCCcceeCcCcEEechhHcEEECCCCCCH
Confidence            5     46899999999999999999999988 5689998877642       3589999999996 6899999999997


Q ss_pred             cchhhhhhhHHHHHHHHHcCCCCCCEEEEE
Q 017916          159 EEGAMCEPLSVGLHACRRANIGPETNVLIM  188 (364)
Q Consensus       159 ~~aa~~~~~~~a~~~l~~~~~~~g~~VLI~  188 (364)
                      ++     ++++|+++++.+++++|++|||+
T Consensus       158 ~~-----pl~~A~~a~~~~~~~~G~~VlI~  182 (184)
T d1vj0a1         158 RL-----PLKEANKALELMESREALKVILY  182 (184)
T ss_dssp             EE-----EGGGHHHHHHHHHHTSCSCEEEE
T ss_pred             HH-----HHHHHHHHHHHhCCCcCCEEEEe
Confidence            64     35568888999999999999997

>d1cdoa1 b.35.1.2 (A:1-164,A:340-374) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

Probab=99.97  E-value=2.3e-31  Score=222.99  Aligned_cols=171  Identities=23%  Similarity=0.275  Sum_probs=149.4

Q ss_pred             hhcceeEEEecC-CceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCCCCC
Q 017916           15 EEVNMAAWLLGV-NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVK   93 (364)
Q Consensus        15 ~~~~~~~~~~~~-~~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~   93 (364)
                      ..++||+++..+ .++++++++.|+++++||+|||+++|+|++|++.+.|.+..   ..+|.++|||++|+|+++|++++
T Consensus         6 ~~~~kAav~~~~~~pl~i~ev~~P~p~~~eVlIkv~a~giCgsD~~~~~g~~~~---~~~p~i~GhE~~G~v~~vG~~v~   82 (199)
T d1cdoa1           6 VIKCKAAVAWEANKPLVIEEIEVDVPHANEIRIKIIATGVCHTDLYHLFEGKHK---DGFPVVLGHEGAGIVESVGPGVT   82 (199)
T ss_dssp             CEEEEEEEBCSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHHTTCCT---TSCSEECCCCEEEEEEEECTTCC
T ss_pred             ceEEEEEEEecCCCCcEEEEEECCCCCCCEEEEEEEEEEEecchhhhhhhcccc---cccccccccccceEEEEEcCCCc
Confidence            345678888765 57999999999999999999999999999999999885433   46899999999999999999999


Q ss_pred             CCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCC--------------------CCCcceeEEEecCCceEECC
Q 017916           94 TLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPP--------------------VHGSLANQVVHPADLCFKLP  153 (364)
Q Consensus        94 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~g~~~~~v~~~~~~~~~lP  153 (364)
                      +|++||||++.+...|..|++|+.+++++|.+........                    ..|+|+||+++++++++++|
T Consensus        83 ~~~~GdrV~~~~~~~cg~c~~C~~g~~~~C~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~Ggfaey~~v~~~~~~~iP  162 (199)
T d1cdoa1          83 EFQPGEKVIPLFISQCGECRFCQSPKTNQCVKGWANESPDVMSPKETRFTCKGRKVLQFLGTSTFSQYTVVNQIAVAKID  162 (199)
T ss_dssp             SCCTTCEEEECSSCCCSSSHHHHCTTCCCCSCSGGGTCTTTTSCSCCCEEETTEEEEEGGGTCCSBSEEEEEGGGEEECC
T ss_pred             eecCCCEEEEeeeccccccccccCCCcccccccccccccccccCcccceeeccceeecccccCCceEEEEEchHHEEECC
Confidence            9999999999999999999999999999998764442211                    14999999999999999999


Q ss_pred             CCCCccchhhhh-hhHHHHHHHHH-cCCCCCCEEEEE
Q 017916          154 DNVSLEEGAMCE-PLSVGLHACRR-ANIGPETNVLIM  188 (364)
Q Consensus       154 ~~~~~~~aa~~~-~~~~a~~~l~~-~~~~~g~~VLI~  188 (364)
                      +++++++++++. ++.|++.+++. ...+.|++|||.
T Consensus       163 ~~~~~~~aa~l~~~l~t~~~av~~~~~~~~G~tVlv~  199 (199)
T d1cdoa1         163 PSVKLDEFITHRMPLESVNDAIDLMKHGKCIRTVLSL  199 (199)
T ss_dssp             TTSCCGGGEEEEEEGGGHHHHHHHHHTTCCSEEEEEC
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHhCCCCCCCEEEeC
Confidence            999999887664 88899999965 678899999984

>d1piwa1 b.35.1.2 (A:1-152,A:321-360) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.97  E-value=3.5e-31  Score=219.65  Aligned_cols=174  Identities=22%  Similarity=0.359  Sum_probs=150.9

Q ss_pred             ccchhcceeEEEecC---CceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEe
Q 017916           12 EDGEEVNMAAWLLGV---NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV   88 (364)
Q Consensus        12 ~~~~~~~~~~~~~~~---~~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~v   88 (364)
                      |+.++++++..+.++   ..+++.+.+.++++|+||||||+++|||++|++.+.|.+..   ..+|+++|||++|+|+++
T Consensus         1 m~~P~~~ka~~~~~~~~~~~~~~~~~~p~p~~~~eVlVkv~a~giC~sDl~~~~g~~~~---~~~P~i~GHE~~G~Vv~v   77 (192)
T d1piwa1           1 MSYPEKFEGIAIQSHEDWKNPKKTKYDPKPFYDHDIDIKIEACGVCGSDIHCAAGHWGN---MKMPLVVGHEIVGKVVKL   77 (192)
T ss_dssp             CCTTTCEEEEEECCSSSTTSCEEEEECCCCCCTTEEEEEEEEEEECHHHHHHHTTTTSC---CCSSEECCCCEEEEEEEE
T ss_pred             CCCCceeEEEEEeCCCcCCcceEeeccCCCCCCCeEEEEEeeeCCCcchHHHHcCCCCC---CCCCcCcccccccchhhc
Confidence            456778999998866   45788888777789999999999999999999999876532   578999999999999999


Q ss_pred             CCCC-CCCCCCCEEEEcCC-cCCCCCccccCCCCCCCCCcccccc------CCCCCcceeEEEecCCceEECCCCCCccc
Q 017916           89 GSEV-KTLVPGDRVALEPG-ISCWRCDHCKGGRYNLCPEMKFFAT------PPVHGSLANQVVHPADLCFKLPDNVSLEE  160 (364)
Q Consensus        89 G~~v-~~~~~Gd~V~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~g~~~~~v~~~~~~~~~lP~~~~~~~  160 (364)
                      |+++ +.+++||||...+. ..|..|.+|..+++++|.+......      ...+|+|+||+++++++++++|++++++.
T Consensus        78 G~~v~~~~k~GdrV~~~~~~~~c~~c~~c~~g~~~~C~~~~~~~~~~~~~G~~~~Ggfaey~~v~~~~~~~iP~~l~~e~  157 (192)
T d1piwa1          78 GPKSNSGLKVGQRVGVGAQVFSCLECDRCKNDNEPYCTKFVTTYSQPYEDGYVSQGGYANYVRVHEHFVVPIPENIWVET  157 (192)
T ss_dssp             CTTCCSSCCTTCEEEECSEEECCSCSHHHHTTCGGGCTTCEESSSCBCTTSCBCCCSSBSEEEEEGGGEEECCTTCCEEE
T ss_pred             ccccccccCCCCeeeEeeeccCCCCchhhhcCCcccccccccccccccccccccccceeeEEEeehHHeEECCCCCCHHH
Confidence            9987 56999999987664 5699999999999999998776542      34679999999999999999999999988


Q ss_pred             hhhhh-hhHHHHHHHHHcCCCCCCEEEEE
Q 017916          161 GAMCE-PLSVGLHACRRANIGPETNVLIM  188 (364)
Q Consensus       161 aa~~~-~~~~a~~~l~~~~~~~g~~VLI~  188 (364)
                      |+++. .+.+||++++++++++|++|||.
T Consensus       158 Aal~~~~~~ta~~~l~~~~vk~g~~Vvv~  186 (192)
T d1piwa1         158 LPVGEAGVHEAFERMEKGDVRYRFTLVGY  186 (192)
T ss_dssp             EESSHHHHHHHHHHHHHTCCSSEEEEECC
T ss_pred             HHHHHHHHHHHHHHHHHhCCCCCCEEEEE
Confidence            88776 47799999999999999999985

>d1e3ia1 b.35.1.2 (A:1-167,A:342-376) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=99.97  E-value=5.6e-31  Score=221.50  Aligned_cols=169  Identities=24%  Similarity=0.346  Sum_probs=145.1

Q ss_pred             chhcceeEEEecC-CceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCCCC
Q 017916           14 GEEVNMAAWLLGV-NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEV   92 (364)
Q Consensus        14 ~~~~~~~~~~~~~-~~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v   92 (364)
                      .+++|||+++.++ ++++++++|.|+++++||||||.++|||++|++.+.|.+    ...+|.++|||++|+|+++|++|
T Consensus         5 ~~~~~KAaV~~~~g~pl~i~evp~P~p~~geVlVkv~a~gic~sD~~~~~G~~----~~~~P~v~GHE~~G~V~~vG~~V   80 (202)
T d1e3ia1           5 KVIKCKAAIAWKTGSPLCIEEIEVSPPKACEVRIQVIATCVCPTDINATDPKK----KALFPVVLGHECAGIVESVGPGV   80 (202)
T ss_dssp             SCEEEEEEEBCSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHTTCTTS----CCCSSBCCCCEEEEEEEEECTTC
T ss_pred             CeEEEEEEEEccCCCCCEEEEEECCCCCCCEEEEEEEEEEEeccccceeeeec----ccccccccccccceEEeeecCCc
Confidence            3457899999876 579999999999999999999999999999999988754    24679999999999999999999


Q ss_pred             CCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccC------------------------CCCCcceeEEEecCCc
Q 017916           93 KTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATP------------------------PVHGSLANQVVHPADL  148 (364)
Q Consensus        93 ~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------------~~~g~~~~~v~~~~~~  148 (364)
                      +++++||+|++.+...|..|++|..++.++|.+....+..                        ...|+|+||+++++.+
T Consensus        81 ~~~~~GdrV~~~~~~~c~~c~~c~~g~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~G~faey~~v~~~~  160 (202)
T d1e3ia1          81 TNFKPGDKVIPFFAPQCKRCKLCLSPLTNLCGKLRNFKYPTIDQELMEDRTSRFTCKGRSIYHFMGVSSFSQYTVVSEAN  160 (202)
T ss_dssp             CSCCTTCEEEECSSCCCSSSHHHHCTTCCCCTTCCCSSCGGGSSCSCTTSCCSEEETTEEEBCCTTTCCSBSEEEEEGGG
T ss_pred             eeccCCCEEEEEeeccccccccccCCcccccccccccccCccceecccccccccccCceeeecccccCCceEEEEEehhh
Confidence            9999999999999999999999999999999887655431                        1248999999999999


Q ss_pred             eEECCCCCCccchhhhh-hhHHHHHHHHHcCCCCCCEEEEE
Q 017916          149 CFKLPDNVSLEEGAMCE-PLSVGLHACRRANIGPETNVLIM  188 (364)
Q Consensus       149 ~~~lP~~~~~~~aa~~~-~~~~a~~~l~~~~~~~g~~VLI~  188 (364)
                      ++++|++++++.++++. .+.+++++++.  +++|++|.|.
T Consensus       161 l~~lP~~~~~~~~~~~~~~~~~~~~a~~~--~k~G~~V~vi  199 (202)
T d1e3ia1         161 LARVDDEFDLDLLVTHALPFESINDAIDL--MKEGKSIRTI  199 (202)
T ss_dssp             EEECCTTSCGGGGEEEEEEGGGHHHHHHH--HHTTCCSEEE
T ss_pred             EEECCCCCCHHHHHHHHHHHHHHHHHHHh--CCCCCEEEEE
Confidence            99999999988766554 56667777654  3689988775

>d1jvba1 b.35.1.2 (A:1-143,A:314-347) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=99.97  E-value=1.6e-30  Score=214.26  Aligned_cols=168  Identities=29%  Similarity=0.411  Sum_probs=143.9

Q ss_pred             ceeEEEecC-CceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCC-----ccCCCCcccccceeEEEEEeCCC
Q 017916           18 NMAAWLLGV-NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCAD-----FVVKEPMVIGHECAGVIEKVGSE   91 (364)
Q Consensus        18 ~~~~~~~~~-~~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~-----~~~~~p~~~G~e~~G~V~~vG~~   91 (364)
                      |||+++..+ ++|++++++.|+++++||+|||.++|||++|++++.|.+...     ....+|+++|||++|+|+++|++
T Consensus         1 MKA~~~~~~G~pl~i~dv~~P~p~~~eVlVkv~a~gic~~D~~~~~G~~~~~~~~~~~~~~~P~v~GhE~~G~V~~~g~~   80 (177)
T d1jvba1           1 MRAVRLVEIGKPLSLQEIGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHEIAGKIEEVGDE   80 (177)
T ss_dssp             CEEEEECSTTSCCEEEECCCCCCCTTCEEEEEEEEEECTHHHHHTTTEETTEETTTTTCCCSCEECCCEEEEEEEEECTT
T ss_pred             CeEEEEEeCCCCCEEEEeeCCCCCCCEEEEEEEEEecccceeeeecCcccccccccccccCCCccccceEEEEEeeeccC
Confidence            688888876 569999999999999999999999999999999999865321     23578999999999999999999


Q ss_pred             CCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCc-eEECCCCCCccchhh-hhhhHH
Q 017916           92 VKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADL-CFKLPDNVSLEEGAM-CEPLSV  169 (364)
Q Consensus        92 v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~-~~~lP~~~~~~~aa~-~~~~~~  169 (364)
                      +++|++||+|++.+...|..|.+|+.++.++|.+..+.+. ..+|+|+||+.+++.. ++++|+..+.+.|+. +.++.+
T Consensus        81 v~~~~~GdrV~~~~~~~c~~c~~~~~g~~~~c~~~~~~g~-~~~G~~aey~~vp~~~~~~~~~~~~~~~~a~~~~~~~~~  159 (177)
T d1jvba1          81 VVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPRWLGI-NFDGAYAEYVIVPHYKYMYKLRRVKPMITKTMKLEEANE  159 (177)
T ss_dssp             CCSCCTTCEEEECCEECCSSSHHHHTTCGGGCSSCEEBTT-TBCCSSBSEEEESCGGGEEECSSSCCCCEEEEEGGGHHH
T ss_pred             ccccccCceEeeeeccccccccccccccccccCCcceeee-ccccccccEEEEEhHHeEEECCCCChHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999988764 5789999999998755 556555554444443 358889


Q ss_pred             HHHHHHHcCCCCCCEEEE
Q 017916          170 GLHACRRANIGPETNVLI  187 (364)
Q Consensus       170 a~~~l~~~~~~~g~~VLI  187 (364)
                      ++++++.+++ .|++|||
T Consensus       160 a~~~~~~~~~-~G~~VlI  176 (177)
T d1jvba1         160 AIDNLENFKA-IGRQVLI  176 (177)
T ss_dssp             HHHHHHTTCC-CSEEEEE
T ss_pred             HHHHHHhhcc-cCCceEC
Confidence            9999988886 6999998

>d1rjwa1 b.35.1.2 (A:1-137,A:306-339) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=99.97  E-value=1.8e-30  Score=212.87  Aligned_cols=167  Identities=32%  Similarity=0.462  Sum_probs=145.1

Q ss_pred             ceeEEEecC-CceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCCCCCCCC
Q 017916           18 NMAAWLLGV-NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLV   96 (364)
Q Consensus        18 ~~~~~~~~~-~~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~   96 (364)
                      |||+++... +++++++++.|++++|||||||++++||++|++.+.+.+..  ...+|.++|||++|+|+++|++++.++
T Consensus         1 MkA~v~~~~g~pl~i~~v~~P~~~~~eVlVkv~a~gic~sD~~~~~~~~~~--~~~~p~v~GhE~~G~Vv~vG~~v~~~~   78 (171)
T d1rjwa1           1 MKAAVVEQFKEPLKIKEVEKPTISYGEVLVRIKACGVCHTDLHAAHGDWPV--KPKLPLIPGHEGVGIVEEVGPGVTHLK   78 (171)
T ss_dssp             CEEEEBSSTTSCCEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHTCSSS--CCCSSBCCCSCEEEEEEEECTTCCSCC
T ss_pred             CeEEEEecCCCCcEEEEeECCCCCCCeEEEEEEEeeccccceeeeeccccc--ccccccccCCEEEEEEEEecccccCce
Confidence            688888865 56999999999999999999999999999999988765433  357899999999999999999999999


Q ss_pred             CCCEEEEcCC-cCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCccchhhhhhhHHHHHHHH
Q 017916           97 PGDRVALEPG-ISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACR  175 (364)
Q Consensus        97 ~Gd~V~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~lP~~~~~~~aa~~~~~~~a~~~l~  175 (364)
                      +||+|+..+. ..|..|..|.....++|.+....+. ..+|+|+||+++++++++++|++++++.|+ +.++.++++.+.
T Consensus        79 vGdrV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~~~G~~aey~~v~~~~~~~iP~~~~~e~A~-l~~~~~~~~~~~  156 (171)
T d1rjwa1          79 VGDRVGIPWLYSACGHCDYCLSGQETLCEHQKNAGY-SVDGGYAEYCRAAADYVVKIPDNTIIEVQP-LEKINEVFDRML  156 (171)
T ss_dssp             TTCEEEECSEEECCSCSHHHHTTCGGGCTTCEEBTT-TBCCSSBSEEEEEGGGCEECCTTCCEEEEE-GGGHHHHHHHHH
T ss_pred             eeeEEeeccccccccccccccCCCccccccccccce-eccCccccceEecHHHEEECCCCCCHHHHH-HHHHHHHHHHHH
Confidence            9999987654 5588999999999999999887764 578999999999999999999999987665 456777888776


Q ss_pred             HcCCCCCCEEEEEc
Q 017916          176 RANIGPETNVLIMG  189 (364)
Q Consensus       176 ~~~~~~g~~VLI~G  189 (364)
                      ++.+ +|++|||.|
T Consensus       157 ~~~~-~G~tVlViG  169 (171)
T d1rjwa1         157 KGQI-NGRVVLTLE  169 (171)
T ss_dssp             TTCC-SSEEEEECC
T ss_pred             hcCC-CCCEEEEeC
Confidence            6666 499999987

>d2fzwa1 b.35.1.2 (A:1-162,A:339-373) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=99.97  E-value=2.9e-30  Score=215.43  Aligned_cols=170  Identities=20%  Similarity=0.223  Sum_probs=146.4

Q ss_pred             hcceeEEEecC-CceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCCCCCC
Q 017916           16 EVNMAAWLLGV-NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT   94 (364)
Q Consensus        16 ~~~~~~~~~~~-~~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~   94 (364)
                      .++||+++..+ ++|+++++|.|+|+++||||||+++|||++|++++.|.+.   ...+|.++|||++|+|+++|++|+.
T Consensus         5 ~~~kAav~~~~g~~l~i~evp~P~p~~~eVLVkv~a~gic~sD~~~~~G~~~---~~~~p~v~GhE~~G~V~~vG~~V~~   81 (197)
T d2fzwa1           5 IKCKAAVAWEAGKPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADP---EGCFPVILGHLGAGIVESVGEGVTK   81 (197)
T ss_dssp             EEEEEEEBCSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHHTCCT---TCCSSBCCCCEEEEEEEEECTTCCS
T ss_pred             eEEEEEEEccCCCCCEEEEEECCCCCCCEEEEEEEEecCCCCcHHHHcCCcc---cccccccCCcceeeEEEeecCCcee
Confidence            45889999866 6799999999999999999999999999999999998643   2578999999999999999999999


Q ss_pred             CCCCCEEEEcCCcCCCCCccccCCCCCCCCCcccccc--------------------CCCCCcceeEEEecCCceEECCC
Q 017916           95 LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFAT--------------------PPVHGSLANQVVHPADLCFKLPD  154 (364)
Q Consensus        95 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~g~~~~~v~~~~~~~~~lP~  154 (364)
                      +++||+|++.+...|..|.+|..++.++|.+......                    ....|+|+||+++++.+++++|+
T Consensus        82 ~~~GdrV~v~~~~~cg~c~~c~~g~~~~C~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~g~GgfAey~vvp~~~~~~vp~  161 (197)
T d2fzwa1          82 LKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLMPDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDP  161 (197)
T ss_dssp             CCTTCEEEECSSCCCSCSHHHHCTTCCCCCTTHHHHHTTCCTTSCCSEEETTEEEBCCTTTCCSBSEEEEEGGGEEECCT
T ss_pred             cCCCCEEEEccccccccccccccCccccCccccccccccccCCccceeccCCcceecccccccceeEEEechHHEEECCC
Confidence            9999999999999999999999999999987543211                    11248999999999999999999


Q ss_pred             CCCccchhhhh-hhHHHHHHHHH-cCCCCCCEEEEE
Q 017916          155 NVSLEEGAMCE-PLSVGLHACRR-ANIGPETNVLIM  188 (364)
Q Consensus       155 ~~~~~~aa~~~-~~~~a~~~l~~-~~~~~g~~VLI~  188 (364)
                      ++++++|+.+. ++.+++.+++. ..-+.+++|||+
T Consensus       162 ~l~~~~aa~~~~~~~t~~~a~~~~~~g~~~~tvvvi  197 (197)
T d2fzwa1         162 LIKVDEFVTHNLSFDEINKAFELMHSGKSIRTVVKI  197 (197)
T ss_dssp             TSCSGGGEEEEEEGGGHHHHHHHHHHTCCSEEEEEC
T ss_pred             CCCHHHHhhhhhHHHHHHHHHHhccCCCcCCEEEeC
Confidence            99998888665 78888888854 333678899873

>d1kola1 b.35.1.2 (A:2-160,A:356-397) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=99.96  E-value=4.8e-33  Score=232.66  Aligned_cols=181  Identities=25%  Similarity=0.386  Sum_probs=149.0

Q ss_pred             ceeEEEecCCceEEEEecCCCC-------CCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCC
Q 017916           18 NMAAWLLGVNTLKIQPFELPSL-------GPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGS   90 (364)
Q Consensus        18 ~~~~~~~~~~~~~~~~~~~p~~-------~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~   90 (364)
                      +||+++.++..++++++|.|++       +++||+|||.+++||++|++.+.|.+    ...+|+++|||++|+|+++|+
T Consensus         2 ~kA~v~~~~~~le~~e~~~P~~~~p~~~p~~~eVlVkv~a~giC~sDl~~~~G~~----~~~~P~v~GHE~~G~Vv~vG~   77 (201)
T d1kola1           2 NRGVVYLGSGKVEVQKIDYPKMQDPRGKKIEHGVILKVVSTNICGSDQHMVRGRT----TAQVGLVLGHEITGEVIEKGR   77 (201)
T ss_dssp             EEEEEEEETTEEEEEEECCCCSBCTTSCBCSSCEEEEEEEEECCHHHHHHHTTCS----CCCTTCBCCCCEEEEEEEECT
T ss_pred             cEEEEEeCCCceEEEEecCCcccCCCCCCCCCEEEEEEEEEEEcchhhhhhcCCc----ccccceeccceeeeeeecccc
Confidence            6899999999999999999875       46999999999999999999988754    346899999999999999999


Q ss_pred             CCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCcccc---------ccCCCCCcceeEEEecC--CceEECCCCCCcc
Q 017916           91 EVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFF---------ATPPVHGSLANQVVHPA--DLCFKLPDNVSLE  159 (364)
Q Consensus        91 ~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~g~~~~~v~~~~--~~~~~lP~~~~~~  159 (364)
                      +|++|++||||...+..+|..|++|+.++.+.|.+....         .....+|+|+||+++|.  .++++||++..+.
T Consensus        78 ~V~~~~vGdrV~v~~~~~Cg~C~~C~~g~~~~~~~~~~~~~~~~~g~~~~~~~~Gg~aeyv~vp~~~~~l~~iPd~~~~~  157 (201)
T d1kola1          78 DVENLQIGDLVSVPFNVACGRCRSCKEMHTGVCLTVNPARAGGAYGYVDMGDWTGGQAEYVLVPYADFNLLKLPDRDKAM  157 (201)
T ss_dssp             TCCSCCTTCEEECCSEECCSSSHHHHTTCGGGCSSSCSSSSCEEBTCTTSCCBCCCSBSEEEESSHHHHCEECSCHHHHH
T ss_pred             ccccccccceeEEeeeeeccCChhhhCCCcccccccccccccccccccCCCccccccccEEEeehHHCeEEECCCCCChH
Confidence            999999999999988899999999999998888664322         11345799999999985  3799999986555


Q ss_pred             chh-hhhhhHHHHHHHHHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCC
Q 017916          160 EGA-MCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGA  206 (364)
Q Consensus       160 ~aa-~~~~~~~a~~~l~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~  206 (364)
                      +++ +..++.++++++.....+.++    +|+|++|+.++|+||++|+
T Consensus       158 ~~~~~~~~~~~~~~a~~~~~~~~g~----~g~G~vG~~~i~~ak~~GA  201 (201)
T d1kola1         158 EKINIAEVVGVQVISLDDAPRGYGE----FDAGVPKKFVIDPHKTFSA  201 (201)
T ss_dssp             HTCCHHHHHTEEEECGGGHHHHHHH----HHHTCSCEEEECTTCSSCC
T ss_pred             HHHHHHHHHHHHHHHHHhCCCCCeE----EeeCHHHHHHHHHHHHcCC
Confidence            544 445666777766554444443    4889999999999999986

>d1uufa1 b.35.1.2 (A:3-144,A:313-349) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=99.96  E-value=4.8e-29  Score=204.48  Aligned_cols=158  Identities=23%  Similarity=0.355  Sum_probs=133.0

Q ss_pred             ceeEEEecC-CceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCCCCCCCC
Q 017916           18 NMAAWLLGV-NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLV   96 (364)
Q Consensus        18 ~~~~~~~~~-~~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~   96 (364)
                      |+|+...++ ++|++.+++.|++++|||||||.++|||++|++.+.|.+..   ..+|+++|||++|+|+++|++|++++
T Consensus         1 m~a~~~~~~~~pl~i~ev~~P~pg~geVlVkv~a~gic~sDl~~~~g~~~~---~~~P~i~GhE~~G~V~~vG~~V~~~~   77 (179)
T d1uufa1           1 IKAVGAYSAKQPLEPMDITRREPGPNDVKIEIAYCGVCHSDLHQVRSEWAG---TVYPCVPGHEIVGRVVAVGDQVEKYA   77 (179)
T ss_dssp             CEEEEBSSTTSCCEEEECCCCCCCTTEEEEEEEEEECCHHHHHHHHCTTSC---CCSSBCCCCCEEEEEEEECTTCCSCC
T ss_pred             CeEEEEccCCCCCEEEEecCCCCCCCEEEEEEEEECCCCCcceeeeeeecc---ccccccccccccccchhhccccccCC
Confidence            567776654 78999999999999999999999999999999999885533   47899999999999999999999999


Q ss_pred             CCCEEEEcCC-cCCCCCccccCCCCCCCCCcccccc-------CCCCCcceeEEEecCCceEECCCCCCccchhhhhhhH
Q 017916           97 PGDRVALEPG-ISCWRCDHCKGGRYNLCPEMKFFAT-------PPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLS  168 (364)
Q Consensus        97 ~Gd~V~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~g~~~~~v~~~~~~~~~lP~~~~~~~aa~~~~~~  168 (364)
                      +||+|...+. ..|..|++|+.+++++|++..+...       ...+|+|+||+++++++++++|+...  .++...++.
T Consensus        78 vGdrV~v~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~~~~~~~GgfaEy~~v~~~~~~~ip~~~~--~~~~a~~l~  155 (179)
T d1uufa1          78 PGDLVGVGCIVDSCKHCEECEDGLENYCDHMTGTYNSPTPDEPGHTLGGYSQQIVVHERYVLRIRVADI--EMIRADQIN  155 (179)
T ss_dssp             TTCEEEECSEEECCSSSHHHHTTCGGGCTTCEETTTSBCSSTTSBCCCSSBSEEEEEGGGCEECCCCCE--EEECGGGHH
T ss_pred             CCCEEEEcccccccCccccccCcccccCCCccccccccCCCCCcccccccceEEEechHHEEECCCCCc--ChhHhchhH
Confidence            9999987664 5799999999999999998754432       12469999999999999999996643  233445778


Q ss_pred             HHHHHHHHcCCC
Q 017916          169 VGLHACRRANIG  180 (364)
Q Consensus       169 ~a~~~l~~~~~~  180 (364)
                      ++++++.++.++
T Consensus       156 ~a~~a~~~a~v~  167 (179)
T d1uufa1         156 EAYERMLRGDVK  167 (179)
T ss_dssp             HHHHHHHTTCSS
T ss_pred             HHHHHHHHhCcc
Confidence            899998877665

>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=1.9e-27  Score=194.63  Aligned_cols=170  Identities=46%  Similarity=0.830  Sum_probs=155.5

Q ss_pred             CCccchhhhhhhHHHHHHHHHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCC
Q 017916          156 VSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVST  235 (364)
Q Consensus       156 ~~~~~aa~~~~~~~a~~~l~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~  235 (364)
                      +++++||++.++++||++++++++++||+|+|+|+|++|++++|+|+++|+++|++++.+++|+++++++|++++++++.
T Consensus         1 vS~e~Aal~epla~a~~a~~~~~~~~gd~VlI~G~G~iG~~~~~~a~~~G~~~Vi~~d~~~~rl~~a~~~Ga~~~~~~~~   80 (171)
T d1pl8a2           1 VTFEEGALIEPLSVGIHACRRGGVTLGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGADLVLQISK   80 (171)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHHTCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCSEEEECSS
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCccHHHHHHHHHHcCCceEEeccCCHHHHHHHHHhCCcccccccc
Confidence            57889999999999999999999999999999999999999999999999988999999999999999999999888544


Q ss_pred             CcccHHHHHHHHHHHcCCCccEEEECCCCHHHHHHHHHhcccCCEEEEEcCCCCCccccchhhhhcCcEEEeeccCCCcH
Q 017916          236 NLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKNTW  315 (364)
Q Consensus       236 ~~~~~~~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  315 (364)
                        +++.+..+.+....+.++|++|||+|++..++.++++++++|+++.+|....+..++...++.|++++.|++.+.+.+
T Consensus        81 --~~~~~~~~~~~~~~g~g~Dvvid~~G~~~~~~~a~~~~~~gG~iv~~G~~~~~~~~~~~~~~~k~l~i~Gs~~~~~~~  158 (171)
T d1pl8a2          81 --ESPQEIARKVEGQLGCKPEVTIECTGAEASIQAGIYATRSGGTLVLVGLGSEMTTVPLLHAAIREVDIKGVFRYCNTW  158 (171)
T ss_dssp             --CCHHHHHHHHHHHHTSCCSEEEECSCCHHHHHHHHHHSCTTCEEEECSCCCSCCCCCHHHHHHTTCEEEECCSCSSCH
T ss_pred             --cccccccccccccCCCCceEEEeccCCchhHHHHHHHhcCCCEEEEEecCCCCCccCHHHHHHCCcEEEEEeCCHhHH
Confidence              566666666666678899999999999999999999999999999999877777888889999999999999888899


Q ss_pred             HHHHHHHHcCCC
Q 017916          316 PLCLELLRSGKI  327 (364)
Q Consensus       316 ~~~~~~l~~g~~  327 (364)
                      +++++++++|++
T Consensus       159 ~~al~li~~gki  170 (171)
T d1pl8a2         159 PVAISMLASKSV  170 (171)
T ss_dssp             HHHHHHHHTTSC
T ss_pred             HHHHHHHHcCCC
Confidence            999999999987

>d1jqba1 b.35.1.2 (A:1001-1139,A:1314-1351) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=99.96  E-value=7.4e-29  Score=202.80  Aligned_cols=143  Identities=29%  Similarity=0.339  Sum_probs=127.1

Q ss_pred             ceeEEEecCCceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCCCCCCCCC
Q 017916           18 NMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVP   97 (364)
Q Consensus        18 ~~~~~~~~~~~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~   97 (364)
                      ||++++.++..+++.+.|.|+++++||+|||+++|||.+|++.+.+.+.   ...+|+++|||++|+|+++|+++++|++
T Consensus         1 MKa~v~~~~~~l~i~e~p~P~~~~~eVlIkv~a~gic~sD~~~~~~~~~---~~~~P~i~GhE~~G~V~~vG~~v~~~~v   77 (177)
T d1jqba1           1 MKGFAMLGINKLGWIEKERPVAGSYDAIVRPLAVSPCTSDIHTVFEGAL---GDRKNMILGHEAVGEVVEVGSEVKDFKP   77 (177)
T ss_dssp             CEEEEEEETTEEEEEECCCCCCCTTCEEEEEEEECCCHHHHHHHHHCTT---CCCSSEECCCCEEEEEEEECTTCCSCCT
T ss_pred             CeEEEEEeCCCeEEEEeeCCCCCCCEEEEEEEEEecCCCcccccccCCC---CCCCCccCcceeeEEeeecccccceecC
Confidence            7899999999999999999999999999999999999999987766432   2467999999999999999999999999


Q ss_pred             CCEEEEcCCcCCCCCccccCCCCCCCCCccccc--cCCCCCcceeEEEecC--CceEECCCCCCccchhh
Q 017916           98 GDRVALEPGISCWRCDHCKGGRYNLCPEMKFFA--TPPVHGSLANQVVHPA--DLCFKLPDNVSLEEGAM  163 (364)
Q Consensus        98 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~g~~~~~v~~~~--~~~~~lP~~~~~~~aa~  163 (364)
                      ||||+..+..+|.+|.+|+.++.++|.+.....  ....+|+|+||+.++.  .+++++|+++++++++.
T Consensus        78 GdrV~v~~~~~cg~c~~C~~g~~~~c~~~~~~~~~g~~~~G~~aEy~~vp~a~~~l~~iP~~~~~~~~~~  147 (177)
T d1jqba1          78 GDRVIVPCTTPDWRSLEVQAGFQQHSNGMLAGWKFSNFKDGVFGEYFHVNDADMNLAILPKDVDLSKLVT  147 (177)
T ss_dssp             TCEEEECSCCCCSSSHHHHTTCGGGTTSTTTTCCBTTTBCCSSBSSEEESSHHHHCEECCTTSCGGGGEE
T ss_pred             CCcEEEeeeeccccccchhhhhhcccccccccccccCCCChhcCeeEEEEhhhCeEEECCCCcchHHHHH
Confidence            999999999999999999999999998875432  2457899999999986  47999999999877653

>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=99.96  E-value=2.4e-27  Score=194.03  Aligned_cols=170  Identities=48%  Similarity=0.799  Sum_probs=155.8

Q ss_pred             CCccchhhhhhhHHHHHHHHHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCC
Q 017916          156 VSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVST  235 (364)
Q Consensus       156 ~~~~~aa~~~~~~~a~~~l~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~  235 (364)
                      +++++||++.++++||++++++++++||+|||+|+|++|++++|+|+.+|+ .|++++.+++|.++++++|++..+.++.
T Consensus         1 VS~e~Aal~ePla~a~~a~~~~~~~~g~~vlV~G~G~vG~~~~~~ak~~Ga-~vi~v~~~~~r~~~a~~~ga~~~~~~~~   79 (170)
T d1e3ja2           1 VSLEEGALLEPLSVGVHACRRAGVQLGTTVLVIGAGPIGLVSVLAAKAYGA-FVVCTARSPRRLEVAKNCGADVTLVVDP   79 (170)
T ss_dssp             SCHHHHHTHHHHHHHHHHHHHHTCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTTCSEEEECCT
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcccccchhhHhhHhhhcc-cccccchHHHHHHHHHHcCCcEEEeccc
Confidence            578899999999999999999999999999999999999999999999999 7899999999999999999999888777


Q ss_pred             CcccHHHHHHHHHHHcCCCccEEEECCCCHHHHHHHHHhcccCCEEEEEcCCCCCccccchhhhhcCcEEEeeccCCCcH
Q 017916          236 NLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKNTW  315 (364)
Q Consensus       236 ~~~~~~~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  315 (364)
                      ...+..+..+.+....+.++|++|||+|++..++.++++++++|+++.+|....+..++...++.|++++.|++.+.+++
T Consensus        80 ~~~~~~~~~~~~~~~~g~g~D~vid~~g~~~~~~~a~~~~~~~G~iv~~G~~~~~~~~~~~~~~~k~i~i~gs~~~~~~~  159 (170)
T d1e3ja2          80 AKEEESSIIERIRSAIGDLPNVTIDCSGNEKCITIGINITRTGGTLMLVGMGSQMVTVPLVNACAREIDIKSVFRYCNDY  159 (170)
T ss_dssp             TTSCHHHHHHHHHHHSSSCCSEEEECSCCHHHHHHHHHHSCTTCEEEECSCCSSCCCCCHHHHHTTTCEEEECCSCSSCH
T ss_pred             cccccchhhhhhhcccccCCceeeecCCChHHHHHHHHHHhcCCceEEEecCCCCCCcCHHHHHHCCCEEEEEECCHHHH
Confidence            77777777777777778899999999999899999999999999999999877767788888999999999998888899


Q ss_pred             HHHHHHHHcCC
Q 017916          316 PLCLELLRSGK  326 (364)
Q Consensus       316 ~~~~~~l~~g~  326 (364)
                      +++++++++|+
T Consensus       160 ~~ai~li~~Gk  170 (170)
T d1e3ja2         160 PIALEMVASGR  170 (170)
T ss_dssp             HHHHHHHHTTS
T ss_pred             HHHHHHHHcCC
Confidence            99999999986

>d1yb5a1 b.35.1.2 (A:6-120,A:295-329) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=5.1e-28  Score=193.00  Aligned_cols=143  Identities=21%  Similarity=0.309  Sum_probs=124.9

Q ss_pred             cceeEEEe---cCCceEEE-EecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCCCC
Q 017916           17 VNMAAWLL---GVNTLKIQ-PFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEV   92 (364)
Q Consensus        17 ~~~~~~~~---~~~~~~~~-~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v   92 (364)
                      -|||+++.   +|+.+++. +.+.|++++|||+|||.++++|+.|++.+.|.+..  ...+|.++|+|++|+|+++|+++
T Consensus         2 ~MkAv~~~~~G~p~~l~~~~~~~~P~~~~~eVlVkv~a~~i~~~D~~~~~g~~~~--~~~~p~i~G~e~~G~V~~vG~~v   79 (150)
T d1yb5a1           2 LMRAVRVFEFGGPEVLKLRSDIAVPIPKDHQVLIKVHACGVNPVETYIRSGTYSR--KPLLPYTPGSDVAGVIEAVGDNA   79 (150)
T ss_dssp             EEEEEEESSCSSGGGEEEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHHTCSSC--CCCSSBCCCSCEEEEEEEECTTC
T ss_pred             ceeEEEEEccCCcceEEEEeecCCCCCCCCeEEEEEEEecCcccchhhhcCCcCc--cccccccCccceeeeeEeeccee
Confidence            36788877   56789985 68999999999999999999999999999886543  35679999999999999999999


Q ss_pred             CCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCccchhhhh-hhHHHH
Q 017916           93 KTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGL  171 (364)
Q Consensus        93 ~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~lP~~~~~~~aa~~~-~~~~a~  171 (364)
                      ++|++||||++.+                           ..+|+|+||+++++++++++|+++++++||+++ ...+++
T Consensus        80 ~~~~vGdrV~~~~---------------------------~~~G~~ae~~~v~~~~~~~iP~~ls~~~Aa~~~~~~~ta~  132 (150)
T d1yb5a1          80 SAFKKGDRVFTSS---------------------------TISGGYAEYALAADHTVYKLPEKLKPVIGSQYPLEKVAEA  132 (150)
T ss_dssp             TTCCTTCEEEESC---------------------------CSSCSSBSEEEEEGGGEEECCTTCCCCEEEEEEGGGHHHH
T ss_pred             eccccCccccccc---------------------------cccccccccccccccccccccCCCCHHHHHHhhhhhhheh
Confidence            9999999998753                           356999999999999999999999999998775 677888


Q ss_pred             HHH-HHcCCCCCCEEEEE
Q 017916          172 HAC-RRANIGPETNVLIM  188 (364)
Q Consensus       172 ~~l-~~~~~~~g~~VLI~  188 (364)
                      +.+ ..+..+.|+++||.
T Consensus       133 ~~~~~~g~~~~G~~vliL  150 (150)
T d1yb5a1         133 HENIIHGSGATGKMILLL  150 (150)
T ss_dssp             HHHHHHSSCCSSEEEEEC
T ss_pred             hhheEEcCcccCCEEEEC
Confidence            876 66888999999983

>d1p0fa1 b.35.1.2 (A:1001-1163,A:1338-1372) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=99.95  E-value=1.9e-28  Score=204.43  Aligned_cols=168  Identities=24%  Similarity=0.370  Sum_probs=139.0

Q ss_pred             hhcceeEEEecC-CceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCCCCC
Q 017916           15 EEVNMAAWLLGV-NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVK   93 (364)
Q Consensus        15 ~~~~~~~~~~~~-~~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~   93 (364)
                      ..+|||+++.++ ++|+++++|.|+++++||||||.++|+|.+|++.+.|.+    ...+|.++|||++|+|+++|+++.
T Consensus         6 ~~~~KAav~~~~g~~l~i~ev~~P~p~~~eVlVkv~a~gICgsDlh~~~G~~----~~~~P~i~GHE~~G~Vv~~G~~v~   81 (198)
T d1p0fa1           6 DITCKAAVAWEPHKPLSLETITVAPPKAHEVRIKILASGICGSDSSVLKEII----PSKFPVILGHEAVGVVESIGAGVT   81 (198)
T ss_dssp             CEEEEEEEBSSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHTTSS----CCCSSBCCCCCEEEEEEEECTTCC
T ss_pred             ceEEEEEEEccCCCCCEEEEEECCCCCCCEEEEEEEEEEEecccceeeeecc----ccccccccceeeeeeeeecCcccc
Confidence            357999999877 689999999999999999999999999999999998754    246899999999999999999999


Q ss_pred             CCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccC--------------------CCCCcceeEEEecCCceEECC
Q 017916           94 TLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATP--------------------PVHGSLANQVVHPADLCFKLP  153 (364)
Q Consensus        94 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~g~~~~~v~~~~~~~~~lP  153 (364)
                      ++++||+|++.+...|..|.+|..++.++|++.......                    ...|+|+||+.+++..++++|
T Consensus        82 ~~~~GdrV~~~~~~~Cg~c~~c~~g~~~~C~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~faey~~v~~~~~~kip  161 (198)
T d1p0fa1          82 CVKPGDKVIPLFVPQCGSCRACKSSNSNFCEKNDMGAKTGLMADMTSRFTCRGKPIYNLMGTSTFTEYTVVADIAVAKID  161 (198)
T ss_dssp             SCCTTCEEEECSSCCCSSSHHHHCTTCCCCTTCSTTTCCCSCTTSCCSEEETTEEEBCSTTTCCSBSEEEEETTSEEEEC
T ss_pred             cCcCCCEEEEEeeccccccccccccccccchhhhccccccccCCCceeEeeCCeeccccCCCccceeeEEecHHHEEECC
Confidence            999999999999999999999999999999876554321                    124889999999999999999


Q ss_pred             CCCCccchhhhh-hhHHHHHHHHHcCCCCCCEEEEEcCCHHHH
Q 017916          154 DNVSLEEGAMCE-PLSVGLHACRRANIGPETNVLIMGAGPIGL  195 (364)
Q Consensus       154 ~~~~~~~aa~~~-~~~~a~~~l~~~~~~~g~~VLI~Gag~~G~  195 (364)
                      ++++.+.++... .+         ..+.+++.|||.|+|++|+
T Consensus       162 ~~~~~~~~~~~~~~~---------~~v~~~~~vlv~G~G~iGl  195 (198)
T d1p0fa1         162 PKINVNFLVSTKLTL---------DQINKAFELLSSGQGVRSI  195 (198)
T ss_dssp             TTSCGGGGEEEEECG---------GGHHHHHHHTTTSSCSEEE
T ss_pred             CCCCHHHHHHhhcch---------hhcCCCCEEEEECCCcceE
Confidence            999876644321 21         2223444577777776654

>d2jhfa1 b.35.1.2 (A:1-163,A:340-374) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=99.95  E-value=9.8e-28  Score=200.72  Aligned_cols=168  Identities=23%  Similarity=0.299  Sum_probs=137.7

Q ss_pred             hhcceeEEEec-CCceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCCCCC
Q 017916           15 EEVNMAAWLLG-VNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVK   93 (364)
Q Consensus        15 ~~~~~~~~~~~-~~~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~   93 (364)
                      ...+||+++.. .++|++++++.|+++++||||||.++|||.+|++.+.|.+.    ..+|+++|||++|+|+++|++++
T Consensus         6 ~~k~KAavl~~~~~~l~i~ev~~P~p~~~eVlVkV~a~giC~sDl~~~~G~~~----~~~P~i~GHE~~G~Vv~vG~~v~   81 (198)
T d2jhfa1           6 VIKCKAAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTLV----TPLPVIAGHEAAGIVESIGEGVT   81 (198)
T ss_dssp             CEEEEEEEBCSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHHTSSC----CCSSBCCCCSEEEEEEEECTTCC
T ss_pred             ceEEEEEEEecCCCCCEEEEEECCCCCCCEEEEEEEEEecccccceeecCCcc----cccceecccceeEEEEecCcccc
Confidence            34578888775 46799999999999999999999999999999999987543    46899999999999999999999


Q ss_pred             CCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccC--------------------CCCCcceeEEEecCCceEECC
Q 017916           94 TLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATP--------------------PVHGSLANQVVHPADLCFKLP  153 (364)
Q Consensus        94 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~g~~~~~v~~~~~~~~~lP  153 (364)
                      ++++||+|++.+...|..|.+|+.++.++|.+.......                    ...|+|+||+++++.+++++|
T Consensus        82 ~~~vGdrV~v~~~~~c~~c~~c~~g~~~~C~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~G~fAEy~~v~~~~~~~~p  161 (198)
T d2jhfa1          82 TVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKID  161 (198)
T ss_dssp             SCCTTCEEEECSSCCCSCSHHHHSTTCCCCTTCSSSSCCCSCTTSCCSEEETTEEEBCSTTTCCSBSEEEEEGGGEEECC
T ss_pred             CcCCCCEEEEeeeecccccccccCCccceeccccccccCccccCccccccccCceeccCCCCCcccCeEEeCHHHeEECC
Confidence            999999999999999999999999999999887653221                    124899999999999999999


Q ss_pred             CCCCccchhhh-hhhHHHHHHHHHcCCCCCCEEEEE
Q 017916          154 DNVSLEEGAMC-EPLSVGLHACRRANIGPETNVLIM  188 (364)
Q Consensus       154 ~~~~~~~aa~~-~~~~~a~~~l~~~~~~~g~~VLI~  188 (364)
                      +.++++.++.. .++.....+.  ..+++|++|+|.
T Consensus       162 ~~~~~e~l~~~~~~~~~v~~g~--~~l~~G~~VaVi  195 (198)
T d2jhfa1         162 AAFALDPLITHVLPFEKINEGF--DLLRSGESIRTI  195 (198)
T ss_dssp             TTSCCGGGEEEEEEGGGHHHHH--HHHHTTCCSEEE
T ss_pred             CCCCHHHHHHHHHHHHhhhhCC--ceeeCCCEEEEE
Confidence            99887654432 2333222221  335788988775

>d1qora1 b.35.1.2 (A:2-112,A:292-327) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=99.94  E-value=1e-26  Score=185.04  Aligned_cols=133  Identities=25%  Similarity=0.287  Sum_probs=115.7

Q ss_pred             cCCceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCCCCCCCCCCCEEEEc
Q 017916           25 GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALE  104 (364)
Q Consensus        25 ~~~~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~  104 (364)
                      +|+.|++.+.+.|+++++||+|||+++++|+.|+..+.|.+..   ..+|.++|+|++|+|+++|+++++|++||||+..
T Consensus        11 ~pe~l~~~e~~~P~p~~~eVlVkv~a~~in~~D~~~~~G~~~~---~~~p~~~G~e~~G~V~~vG~~v~~~~vGdrV~~~   87 (147)
T d1qora1          11 GPEVLQAVEFTPADPAENEIQVENKAIGINFIDTYIRSGLYPP---PSLPSGLGTEAAGIVSKVGSGVKHIKAGDRVVYA   87 (147)
T ss_dssp             SGGGCEEEECCCCCCCTTEEEEEEEEEECCHHHHHHHHTSSCC---SSSSBCCCSCEEEEEEEECTTCCSCCTTCEEEES
T ss_pred             CCceeEEEEecCCCCCCCEEEEEEEEecccceeeeeecCCCCC---Ccceeeeccccccceeeeeeecccccccceeeee
Confidence            4678999999999999999999999999999999999986542   5789999999999999999999999999999753


Q ss_pred             CCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCccchhh--hh-hhHHHHHHHHHcCCCC
Q 017916          105 PGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAM--CE-PLSVGLHACRRANIGP  181 (364)
Q Consensus       105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~lP~~~~~~~aa~--~~-~~~~a~~~l~~~~~~~  181 (364)
                      .                           ...|+|+||++++.+.++++|++++++.|++  ++ ..+++++++...++++
T Consensus        88 ~---------------------------~~~G~~ae~~~v~~~~~~~~P~~~~~~~a~a~~~~~~~~~~~~~l~~~~~~~  140 (147)
T d1qora1          88 Q---------------------------SALGAYSSVHNIIADKAAILPAAIKVDVAEQQKYPLKDAQRAHEILESRATQ  140 (147)
T ss_dssp             C---------------------------CSSCCSBSEEEEEGGGEEECCTTSCCCCCGGGEEEGGGHHHHHHHHHTTCCC
T ss_pred             c---------------------------cccccceeEEEEehHHeEEcCcccchHHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence            1                           2459999999999999999999998876543  33 5667888776678999


Q ss_pred             CCEEEE
Q 017916          182 ETNVLI  187 (364)
Q Consensus       182 g~~VLI  187 (364)
                      |++|||
T Consensus       141 G~~VLI  146 (147)
T d1qora1         141 GSSLLI  146 (147)
T ss_dssp             BCCEEE
T ss_pred             CCEEEe
Confidence            999998

>d1xa0a1 b.35.1.2 (A:1-118,A:295-328) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=99.93  E-value=1e-25  Score=180.13  Aligned_cols=147  Identities=18%  Similarity=0.069  Sum_probs=118.0

Q ss_pred             hhcceeEEEecC---CceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCCC
Q 017916           15 EEVNMAAWLLGV---NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSE   91 (364)
Q Consensus        15 ~~~~~~~~~~~~---~~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~   91 (364)
                      |.++||+++...   ..++++++++|++++|||||||.++|||++|+..+.|.+.  .....|+++|+|++|+|++  .+
T Consensus         1 m~~~KA~v~~~~~~~~~~~i~~v~~P~~~~~eVlVkV~a~gin~~D~~~~~g~~~--~~~~~p~v~g~e~~G~v~~--~~   76 (152)
T d1xa0a1           1 MSAFQAFVVNKTETEFTAGVQTISMDDLPEGDVLVRVHYSSVNYKDGLASIPDGK--IVKTYPFVPGIDLAGVVVS--SQ   76 (152)
T ss_dssp             CCEEEEEEEEEETTEEEEEEEEEEGGGSCSCSEEEEEEEEECCHHHHHHTSGGGS--SCCSSSBCCCSEEEEEEEE--CC
T ss_pred             CCceEEEEEEecCCceEEEEEEccCCCCCCCEEEEEEEEeCCChHHHHHHhhccc--ccccccceeeeeeeeeeec--cC
Confidence            356788888744   3577889999999999999999999999999998887643  2357899999999999988  55


Q ss_pred             CCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCccchhhh-hhhHHH
Q 017916           92 VKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMC-EPLSVG  170 (364)
Q Consensus        92 v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~lP~~~~~~~aa~~-~~~~~a  170 (364)
                      ++.|++||+|+......                      ....+|+|+||+++++++++++|++++. +||++ ....|+
T Consensus        77 ~~~~~~g~~v~~~~~~~----------------------~~~~~G~~aEy~~v~~~~~~~iP~~l~~-~aa~l~~a~~ta  133 (152)
T d1xa0a1          77 HPRFREGDEVIATGYEI----------------------GVTHFGGYSEYARLHGEWLVPLPKGLER-IAQEISLAELPQ  133 (152)
T ss_dssp             SSSCCTTCEEEEESTTB----------------------TTTBCCSSBSEEEECGGGCEECCTTHHH-HEEEEEGGGHHH
T ss_pred             CCccccCCEEEEecCcc----------------------ccccCCCcceeeeehhhccccCCCCCCH-HHHHHHHHHHHH
Confidence            67899999998753211                      1245799999999999999999999985 55545 466677


Q ss_pred             HHHH-HHcCCCCCCEEEEEc
Q 017916          171 LHAC-RRANIGPETNVLIMG  189 (364)
Q Consensus       171 ~~~l-~~~~~~~g~~VLI~G  189 (364)
                      +.++ .+.+++ |++|||+|
T Consensus       134 ~~~~~~~~~~~-G~tVL~l~  152 (152)
T d1xa0a1         134 ALKRILRGELR-GRTVVRLA  152 (152)
T ss_dssp             HHHHHHHTCCC-SEEEEECC
T ss_pred             HHHHHHhcCCC-CCEEEEcC
Confidence            6666 667775 99999975

>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=99.93  E-value=3.1e-25  Score=181.27  Aligned_cols=167  Identities=22%  Similarity=0.353  Sum_probs=140.1

Q ss_pred             CCccchhhh-hhhHHHHHHHHHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecC
Q 017916          156 VSLEEGAMC-EPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVS  234 (364)
Q Consensus       156 ~~~~~aa~~-~~~~~a~~~l~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~  234 (364)
                      +++++|+++ .+++|+|++++.+++++|++|||+|+|++|++++|+|+.+|+++|++++.+++|.++++++|+++++++.
T Consensus         1 ip~e~A~~l~~~~~ta~~a~~~a~~~~g~~VlI~GaG~vGl~~~q~ak~~Ga~~Vi~~d~~~~r~~~a~~lGa~~~i~~~   80 (174)
T d1jqba2           1 MPLENAVMITDMMTTGFHGAELADIEMGSSVVVIGIGAVGLMGIAGAKLRGAGRIIGVGSRPICVEAAKFYGATDILNYK   80 (174)
T ss_dssp             SCHHHHHTTTTHHHHHHHHHHHTTCCTTCCEEEECCSHHHHHHHHHHHTTTCSCEEEECCCHHHHHHHHHHTCSEEECGG
T ss_pred             CCHHHHHHhhhHHHHHHHHHHHhCCCCCCEEEEEcCCcchhhhhhhhhcccccccccccchhhhHHHHHhhCcccccccc
Confidence            467889987 5899999999999999999999999999999999999999998899999999999999999999998865


Q ss_pred             CCcccHHHHHHHHHHHcCCCccEEEECCCCHHHHHHHHHhcccCCEEEEEcCCCCCccccchh----hhhcCcEEEeecc
Q 017916          235 TNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTP----AAVREVDVVGVFR  310 (364)
Q Consensus       235 ~~~~~~~~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~----~~~~~~~~~~~~~  310 (364)
                      +  +++.+.+++++  .+.++|++|||+|++..+++++++++++|+++.+|.......+++..    ...+++++.+...
T Consensus        81 ~--~~~~~~v~~~t--~g~G~D~vid~~g~~~~~~~a~~~~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~i~g~~~  156 (174)
T d1jqba2          81 N--GHIEDQVMKLT--NGKGVDRVIMAGGGSETLSQAVKMVKPGGIISNINYHGSGDALLIPRVEWGCGMAHKTIKGGLC  156 (174)
T ss_dssp             G--SCHHHHHHHHT--TTSCEEEEEECSSCTTHHHHHHHHEEEEEEEEECCCCCSSSEEEEETTTTGGGTBCCEEEEBCC
T ss_pred             c--hhHHHHHHHHh--hccCcceEEEccCCHHHHHHHHHHHhcCCEEEEEeecCCCCcCcCcHhHHHHHhCccEEEEecC
Confidence            3  67777777765  36789999999999899999999999999999999755443333322    3457788888765


Q ss_pred             C--CCcHHHHHHHHHcCC
Q 017916          311 Y--KNTWPLCLELLRSGK  326 (364)
Q Consensus       311 ~--~~~~~~~~~~l~~g~  326 (364)
                      .  +...+++.++++.|+
T Consensus       157 ~~~r~~~e~l~~li~~gk  174 (174)
T d1jqba2         157 PGGRLRAERLRDMVVYNR  174 (174)
T ss_dssp             CCHHHHHHHHHHHHHTTS
T ss_pred             CCCcccHHHHHHHHHcCC
Confidence            4  445677888888875

>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=99.93  E-value=5.6e-25  Score=179.72  Aligned_cols=167  Identities=26%  Similarity=0.374  Sum_probs=148.3

Q ss_pred             CCccchhhhh-hhHHHHHHHHHcCCCCCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEec
Q 017916          156 VSLEEGAMCE-PLSVGLHACRRANIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKV  233 (364)
Q Consensus       156 ~~~~~aa~~~-~~~~a~~~l~~~~~~~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~  233 (364)
                      +++.+||.++ ...|||+++++.++++|++|||+|+ |++|++++|+++..|+..|++++.+++|.++++++|+++++++
T Consensus         1 l~~~eAA~l~c~~~Ta~~al~~~~~~~g~~vlV~G~~G~vG~~~~~~~~~~g~~~V~~~~~~~~~~~~~~~~Ga~~~i~~   80 (170)
T d1jvba2           1 LNAVEAAPLTCSGITTYRAVRKASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRAGADYVINA   80 (170)
T ss_dssp             SCHHHHGGGGTHHHHHHHHHHHTTCCTTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHHHTCSEEEET
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHhCCCCCCEEEEEeccccceeeeeecccccccccccccccchhhHHHHHHcCCceeecc
Confidence            4677888776 7889999999999999999999996 9999999999999998899999999999999999999998885


Q ss_pred             CCCcccHHHHHHHHHHHcCCCccEEEECCCCHHHHHHHHHhcccCCEEEEEcCCCCCccccchhhhhcCcEEEeeccC-C
Q 017916          234 STNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY-K  312 (364)
Q Consensus       234 ~~~~~~~~~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~  312 (364)
                      +  .+++.+.+++.+  .++++|++|||+|++..++.++++++++|+++.+|....+..++...++.|++++.|++.+ +
T Consensus        81 ~--~~~~~~~~~~~~--~~~~~d~vid~~g~~~~~~~a~~~l~~~G~iv~~G~~~~~~~~~~~~~~~k~i~i~Gs~~~~~  156 (170)
T d1jvba2          81 S--MQDPLAEIRRIT--ESKGVDAVIDLNNSEKTLSVYPKALAKQGKYVMVGLFGADLHYHAPLITLSEIQFVGSLVGNQ  156 (170)
T ss_dssp             T--TSCHHHHHHHHT--TTSCEEEEEESCCCHHHHTTGGGGEEEEEEEEECCSSCCCCCCCHHHHHHHTCEEEECCSCCH
T ss_pred             C--CcCHHHHHHHHh--hcccchhhhcccccchHHHhhhhhcccCCEEEEeccccCccccCHHHHHhCCcEEEEEecCCH
Confidence            4  467777776553  3678999999999999999999999999999999988777888888899999999999876 6


Q ss_pred             CcHHHHHHHHHcCC
Q 017916          313 NTWPLCLELLRSGK  326 (364)
Q Consensus       313 ~~~~~~~~~l~~g~  326 (364)
                      ++++++++++++||
T Consensus       157 ~d~~~~l~lv~~GK  170 (170)
T d1jvba2         157 SDFLGIMRLAEAGK  170 (170)
T ss_dssp             HHHHHHHHHHHTTS
T ss_pred             HHHHHHHHHHHcCC
Confidence            77999999999986

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=99.92  E-value=1.4e-24  Score=177.83  Aligned_cols=166  Identities=26%  Similarity=0.447  Sum_probs=143.4

Q ss_pred             CCccchhhhh-hhHHHHHHH-HHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEec
Q 017916          156 VSLEEGAMCE-PLSVGLHAC-RRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKV  233 (364)
Q Consensus       156 ~~~~~aa~~~-~~~~a~~~l-~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~  233 (364)
                      ++++.|+.+. .+.|||+++ +.+++++|++|||+|+|++|++++|+|+++|++++++++.+++|.++++++|+++++++
T Consensus         1 vP~e~aapl~ca~~Ta~~a~~~~~~~~~g~~VlI~G~G~iG~~~~~~ak~~g~~~v~~~~~~~~k~~~a~~~Ga~~~i~~   80 (174)
T d1f8fa2           1 VPIELLGPLGCGIQTGAGACINALKVTPASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRLELAKQLGATHVINS   80 (174)
T ss_dssp             SCGGGTGGGGTHHHHHHHHHHTTTCCCTTCEEEEESCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHHHTCSEEEET
T ss_pred             CCHHHHHHHhhHHHHHHHHHHHhhCCCCCCEEEEeCCCHHHhhhhhcccccccceeeeeccHHHHHHHHHHcCCeEEEeC
Confidence            3556777666 688999997 56899999999999999999999999999999999999999999999999999999886


Q ss_pred             CCCcccHHHHHHHHHHHcCCCccEEEECCCCHHHHHHHHHhcccCCEEEEEcCCC--CCccccchhhhhcCcEEEeeccC
Q 017916          234 STNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGH--HEMTVPLTPAAVREVDVVGVFRY  311 (364)
Q Consensus       234 ~~~~~~~~~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~--~~~~~~~~~~~~~~~~~~~~~~~  311 (364)
                      +.  +++.+.+++++   ++++|++|||+|++..++.++++++++|+++.+|...  ....++...++.+++++.|++..
T Consensus        81 ~~--~~~~~~i~~~t---~gg~D~vid~~G~~~~~~~~~~~~~~~G~i~~~G~~~~~~~~~~~~~~~~~k~~~i~Gs~~g  155 (174)
T d1f8fa2          81 KT--QDPVAAIKEIT---DGGVNFALESTGSPEILKQGVDALGILGKIAVVGAPQLGTTAQFDVNDLLLGGKTILGVVEG  155 (174)
T ss_dssp             TT--SCHHHHHHHHT---TSCEEEEEECSCCHHHHHHHHHTEEEEEEEEECCCCSTTCCCCCCHHHHHHTTCEEEECSGG
T ss_pred             CC--cCHHHHHHHHc---CCCCcEEEEcCCcHHHHHHHHhcccCceEEEEEeecCCCcccccCHHHHHHCCCEEEEEEec
Confidence            53  67888887764   4689999999999999999999999999999998643  34467777889999999998643


Q ss_pred             ----CCcHHHHHHHHHcCC
Q 017916          312 ----KNTWPLCLELLRSGK  326 (364)
Q Consensus       312 ----~~~~~~~~~~l~~g~  326 (364)
                          +++++++++++++|+
T Consensus       156 ~~~~~~~~~~~~~l~~~Gk  174 (174)
T d1f8fa2         156 SGSPKKFIPELVRLYQQGK  174 (174)
T ss_dssp             GSCHHHHHHHHHHHHHTTS
T ss_pred             CCChHHHHHHHHHHHHcCC
Confidence                457889999999985

>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=8.7e-25  Score=179.20  Aligned_cols=163  Identities=23%  Similarity=0.365  Sum_probs=137.2

Q ss_pred             CCccchhhhh-hhHHHHHHHH-HcCCCCCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEe
Q 017916          156 VSLEEGAMCE-PLSVGLHACR-RANIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVK  232 (364)
Q Consensus       156 ~~~~~aa~~~-~~~~a~~~l~-~~~~~~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~  232 (364)
                      +++++||+++ ++.|||+++. .+++++|++|||+|+ |++|++++|+|+.+|+ .+++++.+++|.++++++|++++++
T Consensus         1 ls~~~AA~l~~~~~TA~~al~~~~~~~~g~~VlV~Ga~G~vG~~aiq~a~~~G~-~vi~~~~~~~~~~~~~~~Ga~~vi~   79 (174)
T d1yb5a2           1 LDFKQGAAIGIPYFTAYRALIHSACVKAGESVLVHGASGGVGLAACQIARAYGL-KILGTAGTEEGQKIVLQNGAHEVFN   79 (174)
T ss_dssp             SCHHHHTTTHHHHHHHHHHHHTTSCCCTTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHTTCSEEEE
T ss_pred             CCHHHHHHhHHHHHHHHHHHHHHhCCCCCCEEEEEeccccccccccccccccCc-ccccccccccccccccccCcccccc
Confidence            4788988776 8999999984 689999999999997 9999999999999999 5777778899999999999999998


Q ss_pred             cCCCcccHHHHHHHHHHHcCCCccEEEECCCCHHHHHHHHHhcccCCEEEEEcCCCCCccccchhhhhcCcEEEeeccC-
Q 017916          233 VSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY-  311 (364)
Q Consensus       233 ~~~~~~~~~~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-  311 (364)
                      +.  ++++.+.+++.+  .+.++|++|||+| ++.++.++++|+++|+++.+|... ..+++...++.|++++.+...+ 
T Consensus        80 ~~--~~~~~~~i~~~t--~~~g~d~v~d~~g-~~~~~~~~~~l~~~G~iv~~G~~~-~~~~~~~~~~~k~~~i~g~~~~~  153 (174)
T d1yb5a2          80 HR--EVNYIDKIKKYV--GEKGIDIIIEMLA-NVNLSKDLSLLSHGGRVIVVGSRG-TIEINPRDTMAKESSIIGVTLFS  153 (174)
T ss_dssp             TT--STTHHHHHHHHH--CTTCEEEEEESCH-HHHHHHHHHHEEEEEEEEECCCCS-CEEECTHHHHTTTCEEEECCGGG
T ss_pred             cc--cccHHHHhhhhh--ccCCceEEeeccc-HHHHHHHHhccCCCCEEEEEecCC-CCCCCHHHHHHCCCEEEEEEecC
Confidence            64  468888887765  3778999999999 689999999999999999998643 4566777888999999998654 


Q ss_pred             --CCcHHHHHHHHHcC
Q 017916          312 --KNTWPLCLELLRSG  325 (364)
Q Consensus       312 --~~~~~~~~~~l~~g  325 (364)
                        ++++++++++++++
T Consensus       154 ~~~~~~~~~~~~l~~g  169 (174)
T d1yb5a2         154 STKEEFQQYAAALQAG  169 (174)
T ss_dssp             CCHHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHH
Confidence              34566777666553

>d1iz0a1 b.35.1.2 (A:1-98,A:270-302) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.91  E-value=1.1e-24  Score=168.68  Aligned_cols=128  Identities=21%  Similarity=0.219  Sum_probs=110.6

Q ss_pred             ceeEEEecC-CceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCCCCCCCC
Q 017916           18 NMAAWLLGV-NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLV   96 (364)
Q Consensus        18 ~~~~~~~~~-~~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~   96 (364)
                      |||+++... +++++.+++.|+++++||+|||+++++|+.|+..+.|.+..  ...+|+++|+|++|+|           
T Consensus         1 MkA~~~~~~G~~l~~~e~~~p~p~~~eVlVkv~a~gin~~D~~~~~G~~~~--~~~~P~v~G~E~~G~V-----------   67 (131)
T d1iz0a1           1 MKAWVLKRLGGPLELVDLPEPEAEEGEVVLRVEAVGLNFADHLMRLGAYLT--RLHPPFIPGMEVVGVV-----------   67 (131)
T ss_dssp             CEEEEECSTTSCEEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHTCSSS--CCCSSBCCCCEEEEEE-----------
T ss_pred             CcEEEEccCCCCCEEEEccCCCCCCCEEEEEEEEEeccccccccccccccc--cccceeEeeeeeEEee-----------
Confidence            677777765 56999999999999999999999999999999999886543  3578999999999999           


Q ss_pred             CCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCccchhhhh-hhHHHHHHHH
Q 017916           97 PGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHACR  175 (364)
Q Consensus        97 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~lP~~~~~~~aa~~~-~~~~a~~~l~  175 (364)
                      +||+|++.                            ..+|+|+||+++++++++++|+++++++||++. .+.|||+++.
T Consensus        68 vGd~V~~~----------------------------~~~G~~aey~~v~~~~~~~~P~~~~~~~aa~~~~~~~Ta~~al~  119 (131)
T d1iz0a1          68 EGRRYAAL----------------------------VPQGGLAERVAVPKGALLPLPEGRPVVGPVFPFAEAEAAFRALL  119 (131)
T ss_dssp             TTEEEEEE----------------------------CSSCCSBSEEEEEGGGCEECCTTCCCEEEEEEGGGHHHHHHHTT
T ss_pred             ccceEEEE----------------------------eccCccceeeeeCHHHeEEccCCCCHHHHHHHHHHHHHHHHHHH
Confidence            39999876                            246999999999999999999999999999775 8889999995


Q ss_pred             HcCCCCCCEEEE
Q 017916          176 RANIGPETNVLI  187 (364)
Q Consensus       176 ~~~~~~g~~VLI  187 (364)
                      +.. +.|++||+
T Consensus       120 ~~g-~~g~tvl~  130 (131)
T d1iz0a1         120 DRG-HTGKVVVR  130 (131)
T ss_dssp             CTT-CCBEEEEE
T ss_pred             hcc-cCCCEEEE
Confidence            422 56999987

>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=99.91  E-value=1.1e-23  Score=171.77  Aligned_cols=165  Identities=27%  Similarity=0.449  Sum_probs=135.4

Q ss_pred             ccchhhhh-hhHHHHHHH-HHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCC
Q 017916          158 LEEGAMCE-PLSVGLHAC-RRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVST  235 (364)
Q Consensus       158 ~~~aa~~~-~~~~a~~~l-~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~  235 (364)
                      .+.||++. .+.|+|+++ +.+++++||+|||+|+|++|++++|+|+.+|+++|++++.+++|.++++++|+++++++..
T Consensus         3 Le~aa~l~Ca~~T~~~a~~~~a~v~~G~~VlV~G~G~iGl~a~~~ak~~Ga~~Vi~~d~~~~r~~~a~~~Ga~~~i~~~~   82 (174)
T d1e3ia2           3 LERVCLIGCGFSSGYGAAINTAKVTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKALGATDCLNPRE   82 (174)
T ss_dssp             HHHHGGGGTHHHHHHHHHHTTSCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEEECGGG
T ss_pred             HHHHHHhhhHHHHHHHHHHHhhCCCCCCEEEEECCChHHHHHHHHHHHhCCceeeeeccchHHHHHHHHhCCCcccCCcc
Confidence            45677665 799999998 6799999999999999999999999999999999999999999999999999999988654


Q ss_pred             CcccHHHHHHHHHHHcCCCccEEEECCCCHHHHHHHHHhcccC-CEEEEEcCCCCCccccchhhhhcCcEEEeeccC---
Q 017916          236 NLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAG-GKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY---  311 (364)
Q Consensus       236 ~~~~~~~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~---  311 (364)
                      .+..... +...  +.++++|++|||+|++..+++++++++++ |+++.+|....+..++...+.. +.++.|.+..   
T Consensus        83 ~~~~~~~-~~~~--~~~~G~d~vie~~G~~~~~~~a~~~~~~g~G~~v~vG~~~~~~~i~~~~~~~-~k~i~Gs~~Gs~~  158 (174)
T d1e3ia2          83 LDKPVQD-VITE--LTAGGVDYSLDCAGTAQTLKAAVDCTVLGWGSCTVVGAKVDEMTIPTVDVIL-GRSINGTFFGGWK  158 (174)
T ss_dssp             CSSCHHH-HHHH--HHTSCBSEEEESSCCHHHHHHHHHTBCTTTCEEEECCCSSSEEEEEHHHHHT-TCEEEECSGGGCC
T ss_pred             chhhhhh-hHhh--hhcCCCcEEEEecccchHHHHHHHHhhcCCeEEEecCCCCCccccchHHHhc-cCEEEEEEeeCCC
Confidence            4333333 3322  34789999999999999999999999996 9999999876666666555543 5678887643   


Q ss_pred             -CCcHHHHHHHHHcCC
Q 017916          312 -KNTWPLCLELLRSGK  326 (364)
Q Consensus       312 -~~~~~~~~~~l~~g~  326 (364)
                       .+++.++++++++||
T Consensus       159 ~~~d~p~li~l~~~GK  174 (174)
T d1e3ia2         159 SVDSVPNLVSDYKNKK  174 (174)
T ss_dssp             HHHHHHHHHHHHHTTS
T ss_pred             hHHHHHHHHHHHHCcC
Confidence             556788889888875

>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.91  E-value=6.3e-24  Score=172.68  Aligned_cols=163  Identities=25%  Similarity=0.363  Sum_probs=142.1

Q ss_pred             CCccchhhhh-hhHHHHHHHHHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecC
Q 017916          156 VSLEEGAMCE-PLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVS  234 (364)
Q Consensus       156 ~~~~~aa~~~-~~~~a~~~l~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~  234 (364)
                      +++++||.++ .+.|||++++++++++|++|+|+|+|++|++++|+||.+|+ .|++++.+++|.++++++|+++++++.
T Consensus         1 v~f~~aA~l~ca~~Ta~~al~~~~~~~g~~VlV~GaG~vG~~~~~~ak~~G~-~Vi~~~~~~~~~~~a~~~Ga~~~i~~~   79 (166)
T d1llua2           1 VEFAEIAPILCAGVTVYKGLKQTNARPGQWVAISGIGGLGHVAVQYARAMGL-HVAAIDIDDAKLELARKLGASLTVNAR   79 (166)
T ss_dssp             SCHHHHGGGGTHHHHHHHHHHHHTCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTTCSEEEETT
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHhCCCCCCEEEEeeccccHHHHHHHHHHcCC-ccceecchhhHHHhhhccCcccccccc
Confidence            4778888776 88899999999999999999999999999999999999998 789999999999999999999998864


Q ss_pred             CCcccHHHHHHHHHHHcCCCccEEEECCCCHHHHHHHHHhcccCCEEEEEcCCCCCccccchhhhhcCcEEEeeccC-CC
Q 017916          235 TNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY-KN  313 (364)
Q Consensus       235 ~~~~~~~~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~  313 (364)
                      .  +++.+.+++..    .+.+.+++++++++.++.++++|+++|+++.+|....+..++...++.|++++.|++.+ ++
T Consensus        80 ~--~~~~~~~~~~~----~g~~~~i~~~~~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~k~~~i~Gs~~~~~~  153 (166)
T d1llua2          80 Q--EDPVEAIQRDI----GGAHGVLVTAVSNSAFGQAIGMARRGGTIALVGLPPGDFPTPIFDVVLKGLHIAGSIVGTRA  153 (166)
T ss_dssp             T--SCHHHHHHHHH----SSEEEEEECCSCHHHHHHHHTTEEEEEEEEECCCCSSEEEEEHHHHHHTTCEEEECCSCCHH
T ss_pred             c--hhHHHHHHHhh----cCCcccccccccchHHHHHHHHhcCCcEEEEEEecCCCccCCHHHHHhCCcEEEEEeecCHH
Confidence            3  56666665542    45777777888799999999999999999999987777788888899999999998876 56


Q ss_pred             cHHHHHHHHHcC
Q 017916          314 TWPLCLELLRSG  325 (364)
Q Consensus       314 ~~~~~~~~l~~g  325 (364)
                      +++++++++++|
T Consensus       154 d~~e~l~l~~~G  165 (166)
T d1llua2         154 DLQEALDFAGEG  165 (166)
T ss_dssp             HHHHHHHHHHTT
T ss_pred             HHHHHHHHHHCc
Confidence            799999999887

>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=99.91  E-value=2.5e-23  Score=169.96  Aligned_cols=166  Identities=23%  Similarity=0.356  Sum_probs=136.7

Q ss_pred             ccchhhhh-hhHHHHHHH-HHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCC
Q 017916          158 LEEGAMCE-PLSVGLHAC-RRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVST  235 (364)
Q Consensus       158 ~~~aa~~~-~~~~a~~~l-~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~  235 (364)
                      +.+||++. .+.|+|+++ +.+++++||+|||+|+|++|++++|+|+++|+++|++++.+++|.++++++|+++++++..
T Consensus         2 P~eaa~lgCa~~Ta~~a~~~~a~~~~G~~VlV~GaGgvGl~a~~~ak~~G~~~Vi~~d~~~~kl~~a~~lGa~~~i~~~~   81 (174)
T d1p0fa2           2 PLESCLIGCGFATGYGAAVNTAKVTPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIELGATECLNPKD   81 (174)
T ss_dssp             CGGGGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHTTCSEEECGGG
T ss_pred             HHHHHhhhhHHHHHHHHHHHhhCCCCCCEEEEECCCchhHHHHHHHHHcCCceeeccCChHHHHHHHHHcCCcEEEcCCC
Confidence            35677665 899999997 6799999999999999999999999999999999999999999999999999999998765


Q ss_pred             CcccHHHHHHHHHHHcCCCccEEEECCCCHHHHHHHHHhccc-CCEEEEEcCCCCCccccchh-hhhcCcEEEeeccC--
Q 017916          236 NLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRA-GGKVCLVGMGHHEMTVPLTP-AAVREVDVVGVFRY--  311 (364)
Q Consensus       236 ~~~~~~~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~-~G~~v~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~--  311 (364)
                      .+....+..+.   +.++++|++||++|+.......+..+++ +|+++.+|.......++... ...++.++.|++..  
T Consensus        82 ~d~~~~~~~~~---~~~~G~d~vid~~g~~~~~~~~~~~~~~~~G~~v~vG~~~~~~~~~~~~~~~~~~~~i~Gs~~G~~  158 (174)
T d1p0fa2          82 YDKPIYEVICE---KTNGGVDYAVECAGRIETMMNALQSTYCGSGVTVVLGLASPNERLPLDPLLLLTGRSLKGSVFGGF  158 (174)
T ss_dssp             CSSCHHHHHHH---HTTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECCCCCTTCCEEECTHHHHTTCEEEECSGGGC
T ss_pred             chhHHHHHHHH---hcCCCCcEEEEcCCCchHHHHHHHHHHHhcCceEEEEEecCccccccCHHHHhCCCEEEEEEeCCC
Confidence            43333333332   3467999999999999999999998877 59999999766555665543 45678899998743  


Q ss_pred             -CCcHHHHHHHHHcCC
Q 017916          312 -KNTWPLCLELLRSGK  326 (364)
Q Consensus       312 -~~~~~~~~~~l~~g~  326 (364)
                       .+++.++++++.+|+
T Consensus       159 ~~~d~~~lidl~~~gK  174 (174)
T d1p0fa2         159 KGEEVSRLVDDYMKKK  174 (174)
T ss_dssp             CGGGHHHHHHHHHTTS
T ss_pred             CHHHHHHHHHHHHcCC
Confidence             568999999999885

>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative enoyl reductase domain of polyketide synthase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.91  E-value=4.4e-24  Score=176.57  Aligned_cols=167  Identities=21%  Similarity=0.291  Sum_probs=134.0

Q ss_pred             cchhhhh-hhHHHHHHH-HHcCCCCCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCC
Q 017916          159 EEGAMCE-PLSVGLHAC-RRANIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVST  235 (364)
Q Consensus       159 ~~aa~~~-~~~~a~~~l-~~~~~~~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~  235 (364)
                      ++||+++ ++.|||+++ +.+++++||+|||+|+ |++|++++|+|+.+|+ .++++++++++.++++++|++++++++ 
T Consensus         1 eeAA~l~~~~~TA~~al~~~~~~~~g~~VlI~ga~g~vG~~~iqla~~~g~-~vi~~~~~~~~~~~l~~~Ga~~vi~~~-   78 (183)
T d1pqwa_           1 NEAATFGVAYLTAWHSLCEVGRLSPGERVLIHSATGGVGMAAVSIAKMIGA-RIYTTAGSDAKREMLSRLGVEYVGDSR-   78 (183)
T ss_dssp             CHHHHHHHHHHHHHHHHHTTSCCCTTCEEEETTTTSHHHHHHHHHHHHHTC-EEEEEESSHHHHHHHHTTCCSEEEETT-
T ss_pred             CchhhhhHHHHHHHHHHHHHhCCCCCCEEEEECCCCCcccccchhhccccc-cceeeecccccccccccccccccccCC-
Confidence            3677665 899999998 5578999999999987 9999999999999999 566666788999999999999998864 


Q ss_pred             CcccHHHHHHHHHHHcCCCccEEEECCCCHHHHHHHHHhcccCCEEEEEcCCCCC-ccccchhhhhcCcEEEeeccC---
Q 017916          236 NLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHE-MTVPLTPAAVREVDVVGVFRY---  311 (364)
Q Consensus       236 ~~~~~~~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~---  311 (364)
                       .+++.+.+++++  .+.++|++|||+| ++.++.++++|+++|+++.+|..... ..........+++++.+....   
T Consensus        79 -~~~~~~~v~~~t--~~~g~d~v~d~~g-~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (183)
T d1pqwa_          79 -SVDFADEILELT--DGYGVDVVLNSLA-GEAIQRGVQILAPGGRFIELGKKDVYADASLGLAALAKSASFSVVDLDLNL  154 (183)
T ss_dssp             -CSTHHHHHHHHT--TTCCEEEEEECCC-THHHHHHHHTEEEEEEEEECSCGGGTTTCEEEGGGGTTTCEEEECCHHHHH
T ss_pred             -ccCHHHHHHHHh--CCCCEEEEEeccc-chHHHHHHHHhcCCCEEEEEccCCCCCCcccchHHHhCCcEEEEEEcccee
Confidence             468888887765  3678999999999 47889999999999999999853322 222222344677888776432   


Q ss_pred             -------CCcHHHHHHHHHcCCCCCCC
Q 017916          312 -------KNTWPLCLELLRSGKIDVKP  331 (364)
Q Consensus       312 -------~~~~~~~~~~l~~g~~~~~~  331 (364)
                             ++.++++++++++|++++.|
T Consensus       155 ~~~~~~~~~~~~~v~~~i~~G~i~p~P  181 (183)
T d1pqwa_         155 KLQPARYRQLLQHILQHVADGKLEVLP  181 (183)
T ss_dssp             HHCHHHHHHHHHHHHHHHHTTSSCCCC
T ss_pred             ccCHHHHHHHHHHHHHHHHCCCCceeC
Confidence                   45688999999999995443

>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=99.91  E-value=3.6e-23  Score=169.92  Aligned_cols=167  Identities=26%  Similarity=0.338  Sum_probs=135.5

Q ss_pred             Cccchhhhh-hhHHHHHHH-HHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecC
Q 017916          157 SLEEGAMCE-PLSVGLHAC-RRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVS  234 (364)
Q Consensus       157 ~~~~aa~~~-~~~~a~~~l-~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~  234 (364)
                      ++++||++. .+.|+|+++ +.+++++||+|||+|+|++|++++|+|+.+|+++|++++++++|.+++++||+++++++.
T Consensus         2 P~e~aa~l~ca~~Tay~al~~~~~~~~G~tVlI~GaGGvG~~aiq~ak~~G~~~vi~~~~~~~k~~~ak~lGa~~~i~~~   81 (176)
T d2fzwa2           2 PLDKVCLLGCGISTGYGAAVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATECINPQ   81 (176)
T ss_dssp             CHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHHTCSEEECGG
T ss_pred             CHHHHhHhhcHHHHHHHHHHHhhCCCCCCEEEEecchhHHHHHHHHHHHHhcCceEEEcccHHHHHHHHHhCCcEEEeCC
Confidence            456788776 788999998 568999999999999999999999999999999999999999999999999999999886


Q ss_pred             CCcccHHHHHHHHHHHcCCCccEEEECCCCHHHHHHHHHhcccCCEEEEEcCCC--CCccccchhhhhcCcEEEeeccC-
Q 017916          235 TNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGH--HEMTVPLTPAAVREVDVVGVFRY-  311 (364)
Q Consensus       235 ~~~~~~~~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~--~~~~~~~~~~~~~~~~~~~~~~~-  311 (364)
                      ....+..+.++..   .+.++|++||++|+...+..++.+++++|.++.++...  ..........+.++.++.|+... 
T Consensus        82 ~~~~~~~~~~~~~---~~~g~D~vid~~G~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~~~i~Gs~~G~  158 (176)
T d2fzwa2          82 DFSKPIQEVLIEM---TDGGVDYSFECIGNVKVMRAALEACHKGWGVSVVVGVAASGEEIATRPFQLVTGRTWKGTAFGG  158 (176)
T ss_dssp             GCSSCHHHHHHHH---TTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECSCCCTTCCEEECTHHHHTTCEEEECSGGG
T ss_pred             chhhHHHHHHHHH---cCCCCcEeeecCCCHHHHHHHHHhhcCCceeEEEEeeccccccccccHHHHHCCCEEEEEeeeC
Confidence            5555555544433   46799999999999889899999999998888775322  22333444455688899988754 


Q ss_pred             ---CCcHHHHHHHHHcCC
Q 017916          312 ---KNTWPLCLELLRSGK  326 (364)
Q Consensus       312 ---~~~~~~~~~~l~~g~  326 (364)
                         .+++.++++++++||
T Consensus       159 ~~~~~d~~~li~l~~~GK  176 (176)
T d2fzwa2         159 WKSVESVPKLVSEYMSKK  176 (176)
T ss_dssp             CCHHHHHHHHHHHHHTTS
T ss_pred             CcHHHHHHHHHHHHHcCC
Confidence               456788889988885

>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=99.91  E-value=2.1e-23  Score=170.47  Aligned_cols=162  Identities=24%  Similarity=0.356  Sum_probs=137.2

Q ss_pred             cchhhh-hhhHHHHHHHHH-c-CCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCC
Q 017916          159 EEGAMC-EPLSVGLHACRR-A-NIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVST  235 (364)
Q Consensus       159 ~~aa~~-~~~~~a~~~l~~-~-~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~  235 (364)
                      .++|.+ .+++|||+++++ . .+++|++|||+|+|++|++++|+|+.+|+.++++++.+++|.++++++|+++++++.+
T Consensus         7 ~eaA~l~~~~~Ta~~al~~~~~~~~~g~~vli~GaG~vG~~~~~~a~~~g~~~vv~~~~~~~k~~~~~~~ga~~~i~~~~   86 (172)
T d1h2ba2           7 VEMAPLADAGITAYRAVKKAARTLYPGAYVAIVGVGGLGHIAVQLLKVMTPATVIALDVKEEKLKLAERLGADHVVDARR   86 (172)
T ss_dssp             HHTGGGGTHHHHHHHHHHHHHTTCCTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHHHTTCSEEEETTS
T ss_pred             HHHhHHHhHHHHHHHHHHHhhhccCCCCEEEEeCCChHHHHHHHHHHhhcCcccccccchhHHHHHHhhcccceeecCcc
Confidence            445555 488999999965 3 5899999999999999999999999999989999999999999999999999988643


Q ss_pred             CcccHHHHHHHHHHHcCCCccEEEECCCCHHHHHHHHHhcccCCEEEEEcCCCCCccccchhhhhcCcEEEeeccC-CCc
Q 017916          236 NLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY-KNT  314 (364)
Q Consensus       236 ~~~~~~~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~  314 (364)
                         +..+...+.  +.+.++|++|||+|+...++..+++++++|+++.+|... +.+++...++.|++++.|++.+ .++
T Consensus        87 ---~~~~~~~~~--~~~~g~d~vid~~g~~~~~~~a~~~l~~~G~iv~~G~~~-~~~~~~~~l~~k~~~i~Gs~~~~~~d  160 (172)
T d1h2ba2          87 ---DPVKQVMEL--TRGRGVNVAMDFVGSQATVDYTPYLLGRMGRLIIVGYGG-ELRFPTIRVISSEVSFEGSLVGNYVE  160 (172)
T ss_dssp             ---CHHHHHHHH--TTTCCEEEEEESSCCHHHHHHGGGGEEEEEEEEECCCSS-CCCCCHHHHHHTTCEEEECCSCCHHH
T ss_pred             ---cHHHHHHHh--hCCCCceEEEEecCcchHHHHHHHHHhCCCEEEEEeCcc-cccCCHHHHHhCCcEEEEEEecCHHH
Confidence               334444333  346789999999999889999999999999999999643 4567778889999999999876 567


Q ss_pred             HHHHHHHHHcCC
Q 017916          315 WPLCLELLRSGK  326 (364)
Q Consensus       315 ~~~~~~~l~~g~  326 (364)
                      ++++++++++|+
T Consensus       161 ~~~~l~l~~~GK  172 (172)
T d1h2ba2         161 LHELVTLALQGK  172 (172)
T ss_dssp             HHHHHHHHHTTS
T ss_pred             HHHHHHHHHcCC
Confidence            999999999986

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=99.90  E-value=2.8e-23  Score=171.39  Aligned_cols=162  Identities=21%  Similarity=0.349  Sum_probs=133.1

Q ss_pred             hhhhhHHHHHHHHH-cCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHH
Q 017916          163 MCEPLSVGLHACRR-ANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIA  241 (364)
Q Consensus       163 ~~~~~~~a~~~l~~-~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~  241 (364)
                      +....+|||+++.+ .++++|++|||+|+|++|++++|+|+++|++.|++++.+++|.++++++|+++++++.+  .++.
T Consensus         9 ~~c~~~ta~~al~~~~~~~~G~~VlV~GaG~iG~~~~~~ak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~--~~~~   86 (182)
T d1vj0a2           9 AMCSGATAYHAFDEYPESFAGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEEIGADLTLNRRE--TSVE   86 (182)
T ss_dssp             HTTHHHHHHHHHHTCSSCCBTCEEEEECCSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHHHTTCSEEEETTT--SCHH
T ss_pred             hhcHHHHHHHHHHHHhCCCCCCEEEEECCCccchhheecccccccccccccccccccccccccccceEEEeccc--cchH
Confidence            44577899999954 78999999999999999999999999999988999999999999999999999998654  4444


Q ss_pred             HHHHHHHH-HcCCCccEEEECCCCHHHHHHHHHhcccCCEEEEEcCCCCCccccc---hhhhhcCcEEEeeccC-CCcHH
Q 017916          242 EEVEKIQK-AMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPL---TPAAVREVDVVGVFRY-KNTWP  316 (364)
Q Consensus       242 ~~i~~~~~-~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~---~~~~~~~~~~~~~~~~-~~~~~  316 (364)
                      +..+++.+ +.+.++|+||||+|++..++.++++++++|+++.+|........+.   ..++.|++++.|++.+ .+.++
T Consensus        87 ~~~~~i~~~~~~~g~Dvvid~vG~~~~~~~a~~~l~~~G~iv~~G~~~~~~~~~~~~~~~l~~k~l~i~G~~~~~~~~~~  166 (182)
T d1vj0a2          87 ERRKAIMDITHGRGADFILEATGDSRALLEGSELLRRGGFYSVAGVAVPQDPVPFKVYEWLVLKNATFKGIWVSDTSHFV  166 (182)
T ss_dssp             HHHHHHHHHTTTSCEEEEEECSSCTTHHHHHHHHEEEEEEEEECCCCSCCCCEEECHHHHTTTTTCEEEECCCCCHHHHH
T ss_pred             HHHHHHHHhhCCCCceEEeecCCchhHHHHHHHHhcCCCEEEEEeecCCCCccccccHHHHHHCCcEEEEEEeCCHHHHH
Confidence            44444433 3366899999999988899999999999999999996544333332   2356899999999886 66788


Q ss_pred             HHHHHHHcCC
Q 017916          317 LCLELLRSGK  326 (364)
Q Consensus       317 ~~~~~l~~g~  326 (364)
                      +++++++++.
T Consensus       167 ~~~~~i~~~~  176 (182)
T d1vj0a2         167 KTVSITSRNY  176 (182)
T ss_dssp             HHHHHHHTCH
T ss_pred             HHHHHHHHCh
Confidence            9999988763

>d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=99.90  E-value=4.9e-23  Score=167.77  Aligned_cols=165  Identities=28%  Similarity=0.404  Sum_probs=144.7

Q ss_pred             CCccchhhhh-hhHHHHHHHHHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecC
Q 017916          156 VSLEEGAMCE-PLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVS  234 (364)
Q Consensus       156 ~~~~~aa~~~-~~~~a~~~l~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~  234 (364)
                      +++++||.++ ...|||++++..++++|++|||+|+|++|++++|+|+..|+ .|++++++++|.++++++|++.++++.
T Consensus         1 ls~eeAA~l~~~~~Ta~~al~~~~~~~g~~vlv~G~G~iG~~a~~~a~~~g~-~v~~~~~~~~r~~~~k~~Ga~~~~~~~   79 (168)
T d1rjwa2           1 LSFEEAAPIFCAGVTTYKALKVTGAKPGEWVAIYGIGGLGHVAVQYAKAMGL-NVVAVDIGDEKLELAKELGADLVVNPL   79 (168)
T ss_dssp             SCHHHHGGGGTHHHHHHHHHHHHTCCTTCEEEEECCSTTHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCSEEECTT
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHhCCCCCCEEEEeecccchhhhhHHHhcCCC-eEeccCCCHHHhhhhhhcCcceecccc
Confidence            4788888776 78899999999999999999999999999999999999999 688899999999999999999988854


Q ss_pred             CCcccHHHHHHHHHHHcCCCccEEEECCCCHHHHHHHHHhcccCCEEEEEcCCCCCccccchhhhhcCcEEEeeccC-CC
Q 017916          235 TNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY-KN  313 (364)
Q Consensus       235 ~~~~~~~~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~  313 (364)
                      +  +++.+.+++..    .+.+.++++++++..+..++++++++|+++.+|....+..++...++.+++++.|+... ++
T Consensus        80 ~--~~~~~~~~~~~----~~~~~~v~~~~~~~~~~~a~~~l~~~G~i~~~g~~~~~~~~~~~~~~~~~~~i~gs~~~~~~  153 (168)
T d1rjwa2          80 K--EDAAKFMKEKV----GGVHAAVVTAVSKPAFQSAYNSIRRGGACVLVGLPPEEMPIPIFDTVLNGIKIIGSIVGTRK  153 (168)
T ss_dssp             T--SCHHHHHHHHH----SSEEEEEESSCCHHHHHHHHHHEEEEEEEEECCCCSSEEEEEHHHHHHTTCEEEECCSCCHH
T ss_pred             c--chhhhhccccc----CCCceEEeecCCHHHHHHHHHHhccCCceEecccccCCCCCCHHHHHHCCcEEEEEeeCCHH
Confidence            4  67777777664    35566667777799999999999999999999988777788888899999999998865 67


Q ss_pred             cHHHHHHHHHcCCC
Q 017916          314 TWPLCLELLRSGKI  327 (364)
Q Consensus       314 ~~~~~~~~l~~g~~  327 (364)
                      +++++++++++|++
T Consensus       154 ~~~~~l~l~~~Gki  167 (168)
T d1rjwa2         154 DLQEALQFAAEGKV  167 (168)
T ss_dssp             HHHHHHHHHHTTSC
T ss_pred             HHHHHHHHHHhCCC
Confidence            89999999999987

>d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=99.90  E-value=1.5e-23  Score=170.62  Aligned_cols=163  Identities=20%  Similarity=0.249  Sum_probs=129.2

Q ss_pred             CCccchhhhh-hhHHHHHHHH----HcCCCCCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCe
Q 017916          156 VSLEEGAMCE-PLSVGLHACR----RANIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADN  229 (364)
Q Consensus       156 ~~~~~aa~~~-~~~~a~~~l~----~~~~~~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~  229 (364)
                      +++++||+++ ++.|||++++    ..+.++|++|||+|+ |++|.+++|+|+.+|++ |+++.++++|.++++++|+++
T Consensus         1 lS~~eAAal~~aglTA~~a~~~L~~~g~~~~g~~VLI~gaaGGVG~~aiQlak~~Ga~-Viat~~s~~k~~~~~~lGa~~   79 (176)
T d1xa0a2           1 LTLKEAMAIGTAGFTAALSIHRLEEHGLTPERGPVLVTGATGGVGSLAVSMLAKRGYT-VEASTGKAAEHDYLRVLGAKE   79 (176)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCCEEESSTTSHHHHHHHHHHHHTTCC-EEEEESCTTCHHHHHHTTCSE
T ss_pred             CCHHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCEEEEEeccchHHHHHHHHHHHcCCc-eEEecCchHHHHHHHhcccce
Confidence            5788999887 8889997753    477889999999987 99999999999999995 677778999999999999999


Q ss_pred             EEecCCCcccHHHHHHHHHHHcCCCccEEEECCCCHHHHHHHHHhcccCCEEEEEcCC-CCCccccchhhhhcCcEEEee
Q 017916          230 IVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMG-HHEMTVPLTPAAVREVDVVGV  308 (364)
Q Consensus       230 ~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~-~~~~~~~~~~~~~~~~~~~~~  308 (364)
                      +++|+.   ++.+.+   ..+.++++|+|||++| .+.+..++++|+++|+++.+|.. .....++...++.|++++.|.
T Consensus        80 vi~~~~---~~~~~~---~~~~~~gvD~vid~vg-g~~~~~~l~~l~~~Griv~~G~~~g~~~~~~~~~~~~k~~~i~Gv  152 (176)
T d1xa0a2          80 VLARED---VMAERI---RPLDKQRWAAAVDPVG-GRTLATVLSRMRYGGAVAVSGLTGGAEVPTTVHPFILRGVSLLGI  152 (176)
T ss_dssp             EEECC---------------CCSCCEEEEEECST-TTTHHHHHHTEEEEEEEEECSCCSSSCCCCCSHHHHHTTCEEEEC
T ss_pred             eeecch---hHHHHH---HHhhccCcCEEEEcCC-chhHHHHHHHhCCCceEEEeecccCcccCCCHHHHHHCCcEEEEE
Confidence            998753   233322   2335779999999999 67899999999999999999964 455678888999999999997


Q ss_pred             ccC---CCcHHHHHHHHHcCCC
Q 017916          309 FRY---KNTWPLCLELLRSGKI  327 (364)
Q Consensus       309 ~~~---~~~~~~~~~~l~~g~~  327 (364)
                      ...   .+...++++.+. +.+
T Consensus       153 ~~~~~~~~~~~~~~~~la-g~l  173 (176)
T d1xa0a2         153 DSVYCPMDLRLRIWERLA-GDL  173 (176)
T ss_dssp             CSSSCCHHHHHHHHHHHH-TTT
T ss_pred             eCCcCCHHHHHHHHHHHh-ccc
Confidence            544   234455555553 665

>d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=99.90  E-value=2.8e-23  Score=171.29  Aligned_cols=159  Identities=21%  Similarity=0.260  Sum_probs=128.7

Q ss_pred             hhhhhhhHHHHHHHH-HcCCCCCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcc
Q 017916          161 GAMCEPLSVGLHACR-RANIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQ  238 (364)
Q Consensus       161 aa~~~~~~~a~~~l~-~~~~~~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~  238 (364)
                      +++-.+..|||++|. .+++++||+|||+|+ |++|++++|+|+..|+ +|+++++++++.++++++|+++++++.+  +
T Consensus         8 ~~lg~~glTA~~al~~~~~v~~G~~VlV~ga~ggvG~~aiqlak~~Ga-~vi~~~~~~~~~~~~~~~Ga~~vi~~~~--~   84 (182)
T d1v3va2           8 GTIGMPGLTAYFGLLEVCGVKGGETVLVSAAAGAVGSVVGQIAKLKGC-KVVGAAGSDEKIAYLKQIGFDAAFNYKT--V   84 (182)
T ss_dssp             TTTSHHHHHHHHHHHTTTCCCSSCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHTTCSEEEETTS--C
T ss_pred             HHHhhHHHHHHHHHHHHhCCCCCCEEEEEeCCCchhHHHHHHHHccCC-EEEEeCCCHHHHHHHHhhhhhhhccccc--c
Confidence            333347889999995 689999999999988 9999999999999999 6888888999999999999999988643  5


Q ss_pred             cHHHHHHHHHHHcCCCccEEEECCCCHHHHHHHHHhcccCCEEEEEcCC-------CCCccccchhhhhcCcEEEeeccC
Q 017916          239 DIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMG-------HHEMTVPLTPAAVREVDVVGVFRY  311 (364)
Q Consensus       239 ~~~~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~-------~~~~~~~~~~~~~~~~~~~~~~~~  311 (364)
                      ++.+.+.+..  .+.++|++|||+| .+.++.++++|+++|+++.+|..       ..+..++...++.|++++.|++..
T Consensus        85 ~~~~~~~~~~--~~~Gvd~v~D~vG-~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~l~~k~~ti~g~~~~  161 (182)
T d1v3va2          85 NSLEEALKKA--SPDGYDCYFDNVG-GEFLNTVLSQMKDFGKIAICGAISVYNRMDQLPPGPSPESIIYKQLRIEGFIVY  161 (182)
T ss_dssp             SCHHHHHHHH--CTTCEEEEEESSC-HHHHHHHGGGEEEEEEEEECCCGGGTTCTTSCCBCCCHHHHHHTTCEEEECCGG
T ss_pred             cHHHHHHHHh--hcCCCceeEEecC-chhhhhhhhhccCCCeEEeecceeeccccccCCCCcchHHHhhcCcEEEEEEEe
Confidence            6666554443  4678999999999 78999999999999999999842       112234556688999999997654


Q ss_pred             -------CCcHHHHHHHHHcC
Q 017916          312 -------KNTWPLCLELLRSG  325 (364)
Q Consensus       312 -------~~~~~~~~~~l~~g  325 (364)
                             .+.++++.+++++|
T Consensus       162 ~~~~~~~~~~~~~l~~~i~~G  182 (182)
T d1v3va2         162 RWQGDVREKALRDLMKWVLEG  182 (182)
T ss_dssp             GCCHHHHHHHHHHHHHHHHTT
T ss_pred             ccChHHHHHHHHHHHHHHhCc
Confidence                   24467778887765

>d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=99.90  E-value=1.1e-23  Score=174.75  Aligned_cols=170  Identities=15%  Similarity=0.260  Sum_probs=137.4

Q ss_pred             CCccchhhhh-hhHHHHHHHH-HcCCCCCCEEEEE-cC-CHHHHHHHHHHHHCCCCEEEEEecCh---hHHHHHHHcCCC
Q 017916          156 VSLEEGAMCE-PLSVGLHACR-RANIGPETNVLIM-GA-GPIGLVTMLGARAFGAPRIVIVDVDD---YRLSVAKELGAD  228 (364)
Q Consensus       156 ~~~~~aa~~~-~~~~a~~~l~-~~~~~~g~~VLI~-Ga-g~~G~~ai~la~~~g~~~vv~~~~~~---~~~~~~~~lg~~  228 (364)
                      +++++||+++ .+.|||++|. ..++++|++|+|+ |+ |++|++++|+||++|++++.++...+   ++.+.++++|++
T Consensus         1 ls~~~AA~l~~~~~TA~~~l~~~~~~~~g~~vli~~ga~g~vG~~aiqlAk~~Ga~vI~~v~~~~~~~~~~~~~~~lGad   80 (189)
T d1gu7a2           1 LTINQGATISVNPLTAYLMLTHYVKLTPGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKELGAT   80 (189)
T ss_dssp             CCHHHHHTCTTHHHHHHHHHHSSSCCCTTTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHHHHTCS
T ss_pred             CCHHHHHHhhhHHHHHHHHHHHHhCCCCCCEEEEEeCCCchHHHHHHHHHhhcCCeEEEEEecccccchHHhhhhhcccc
Confidence            5788999887 8999999996 4899999999987 66 99999999999999996555553332   456678899999


Q ss_pred             eEEecCC-CcccHHHHHHHHHHHcCCCccEEEECCCCHHHHHHHHHhcccCCEEEEEcC-CCCCccccchhhhhcCcEEE
Q 017916          229 NIVKVST-NLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGM-GHHEMTVPLTPAAVREVDVV  306 (364)
Q Consensus       229 ~~~~~~~-~~~~~~~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~-~~~~~~~~~~~~~~~~~~~~  306 (364)
                      ++++++. ...++.+.++++....+.++|++||++| .+.+..++++|+++|+++.+|. +..+..++...++.|++++.
T Consensus        81 ~vi~~~~~~~~~~~~~v~~~~~~~g~~vdvv~D~vg-~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~l~~k~~~i~  159 (189)
T d1gu7a2          81 QVITEDQNNSREFGPTIKEWIKQSGGEAKLALNCVG-GKSSTGIARKLNNNGLMLTYGGMSFQPVTIPTSLYIFKNFTSA  159 (189)
T ss_dssp             EEEEHHHHHCGGGHHHHHHHHHHHTCCEEEEEESSC-HHHHHHHHHTSCTTCEEEECCCCSSCCEEECHHHHHHSCCEEE
T ss_pred             EEEeccccchhHHHHHHHHHHhhccCCceEEEECCC-cchhhhhhhhhcCCcEEEEECCccCCCccCcHHHHHHCCcEEE
Confidence            9998753 3356777788887777889999999999 7788999999999999999984 45556677788889999999


Q ss_pred             eeccC----------CCcHHHHHHHHHcCC
Q 017916          307 GVFRY----------KNTWPLCLELLRSGK  326 (364)
Q Consensus       307 ~~~~~----------~~~~~~~~~~l~~g~  326 (364)
                      |++..          .+.++++++++++|+
T Consensus       160 G~~~~~~~~~~~~~~~~~~~~l~~l~~~Gk  189 (189)
T d1gu7a2         160 GFWVTELLKNNKELKTSTLNQIIAWYEEGK  189 (189)
T ss_dssp             ECCHHHHHTTCHHHHHHHHHHHHHHHHHTC
T ss_pred             EEEehHhhhhCHHHHHHHHHHHHHHHHcCC
Confidence            97543          345778888888775

>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.90  E-value=9.7e-24  Score=171.74  Aligned_cols=162  Identities=20%  Similarity=0.225  Sum_probs=137.1

Q ss_pred             Cccchhhhh-hhHHHHHHHHHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCC
Q 017916          157 SLEEGAMCE-PLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVST  235 (364)
Q Consensus       157 ~~~~aa~~~-~~~~a~~~l~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~  235 (364)
                      +++.||.+. ...|+|++++++++++||+|||+|+|++|++++|+||.+|+ .+++++.+++|.++++++|+++++++.+
T Consensus         2 p~e~AApl~cag~Ta~~al~~~~~~~g~~vlI~GaG~vG~~a~q~ak~~G~-~vi~~~~~~~k~~~a~~lGa~~~i~~~~   80 (168)
T d1piwa2           2 PSHLAAPLLCGGLTVYSPLVRNGCGPGKKVGIVGLGGIGSMGTLISKAMGA-ETYVISRSSRKREDAMKMGADHYIATLE   80 (168)
T ss_dssp             CHHHHGGGGTHHHHHHHHHHHTTCSTTCEEEEECCSHHHHHHHHHHHHHTC-EEEEEESSSTTHHHHHHHTCSEEEEGGG
T ss_pred             CHHHHHHHHHHHHHHHHHHHHhCcCCCCEEEEECCCCcchhHHHHhhhccc-cccccccchhHHHHhhccCCcEEeeccc
Confidence            345566554 67899999999999999999999999999999999999999 5788889999999999999999988654


Q ss_pred             CcccHHHHHHHHHHHcCCCccEEEECCCCHH--HHHHHHHhcccCCEEEEEcCCCCCccccchhhhhcCcEEEeeccC-C
Q 017916          236 NLQDIAEEVEKIQKAMGTGIDVSFDCAGFNK--TMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY-K  312 (364)
Q Consensus       236 ~~~~~~~~i~~~~~~~~~~~d~vid~~g~~~--~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~  312 (364)
                      . .++.+       ...+++|+++||+++..  .+..++++++++|+++.+|....+..++...++.|++++.|+... +
T Consensus        81 ~-~~~~~-------~~~~~~d~vi~~~~~~~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~k~~~i~Gs~~g~~  152 (168)
T d1piwa2          81 E-GDWGE-------KYFDTFDLIVVCASSLTDIDFNIMPKAMKVGGRIVSISIPEQHEMLSLKPYGLKAVSISYSALGSI  152 (168)
T ss_dssp             T-SCHHH-------HSCSCEEEEEECCSCSTTCCTTTGGGGEEEEEEEEECCCCCSSCCEEECGGGCBSCEEEECCCCCH
T ss_pred             h-HHHHH-------hhhcccceEEEEecCCccchHHHHHHHhhccceEEEeccccccccccHHHHHhCCcEEEEEeeCCH
Confidence            3 23322       23568999999988643  467889999999999999987777788888899999999998765 7


Q ss_pred             CcHHHHHHHHHcCCC
Q 017916          313 NTWPLCLELLRSGKI  327 (364)
Q Consensus       313 ~~~~~~~~~l~~g~~  327 (364)
                      ++++++++++++|++
T Consensus       153 ~~~~e~l~li~~gkI  167 (168)
T d1piwa2         153 KELNQLLKLVSEKDI  167 (168)
T ss_dssp             HHHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHHhCCC
Confidence            789999999999987

>d1o89a1 b.35.1.2 (A:1-115,A:293-323) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=99.89  E-value=6.5e-23  Score=161.89  Aligned_cols=130  Identities=19%  Similarity=0.143  Sum_probs=106.8

Q ss_pred             ceeEEEec---CCceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCCCCCC
Q 017916           18 NMAAWLLG---VNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT   94 (364)
Q Consensus        18 ~~~~~~~~---~~~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~   94 (364)
                      |||+++..   +..+++++++.|++++|||+|||.|++||+.|+..+.|.+..  ...+|.++|+|++|+|+++|.+  .
T Consensus         1 MkA~v~~~~~~~~~l~i~~v~~p~~~~geVlVkV~a~gin~~D~~~~~G~~~~--~~~~p~v~G~e~~G~V~~~~~~--~   76 (146)
T d1o89a1           1 LQALLLEQQDGKTLASVQTLDESRLPEGDVTVDVHWSSLNYKDALAITGKGKI--IRNFPMIPGIDFAGTVRTSEDP--R   76 (146)
T ss_dssp             CEEEEEECC---CEEEEEECCGGGSCSCSEEEEEEEEECCHHHHHHHHTCSSC--CCSSSBCCCSEEEEEEEEECST--T
T ss_pred             CeEEEEEcCCCceEEEEEEcCCCCCCCCEEEEEEeeccCccceeeEEEeeccc--ccccceeccccccccceeeccC--C
Confidence            67888774   456899999999999999999999999999999988886432  3567999999999999998764  7


Q ss_pred             CCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCccchhhhh-hhHHHHHH
Q 017916           95 LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHA  173 (364)
Q Consensus        95 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~lP~~~~~~~aa~~~-~~~~a~~~  173 (364)
                      +++||+|+......                      ....+|+|+||+.+++++++++|+++++++||+++ ...||+..
T Consensus        77 ~~~g~~v~~~~~~~----------------------g~~~~G~~Aey~~v~~~~vv~lP~~ls~~eAA~l~~a~~tA~~~  134 (146)
T d1o89a1          77 FHAGQEVLLTGWGV----------------------GENHWGGLAEQARVKGDWLVAMPQGQAAKEISLSEAPNFAEAII  134 (146)
T ss_dssp             CCTTCEEEEECTTB----------------------TTTBCCSSBSEEEECGGGCEECCTTSCCEEECGGGHHHHHHHHH
T ss_pred             ccceeeEEeecccc----------------------eecCCCcceeeeeeeeeeEEECCCCCCHHHHHHHHHHHHHHHHH
Confidence            99999998753210                      12457999999999999999999999999999886 44555433

>d1gu7a1 b.35.1.2 (A:23-160,A:350-386) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=99.89  E-value=4e-26  Score=187.59  Aligned_cols=158  Identities=17%  Similarity=0.125  Sum_probs=127.0

Q ss_pred             hhcceeEEEecC----C--ceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCcc-------CCCCcccccce
Q 017916           15 EEVNMAAWLLGV----N--TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFV-------VKEPMVIGHEC   81 (364)
Q Consensus        15 ~~~~~~~~~~~~----~--~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~-------~~~p~~~G~e~   81 (364)
                      |.++||+++...    +  .++..++|.|+++++||||||++++||++|++++.|.+.....       ...|.++|+|+
T Consensus         1 m~t~kA~v~~~~G~p~~~l~l~~~~~p~p~~~~~eVlVkv~a~~i~~~D~~~~~G~~~~~~~~~~~~~~~~~~~v~G~e~   80 (175)
T d1gu7a1           1 MITAQAVLYTQHGEPKDVLFTQSFEIDDDNLAPNEVIVKTLGSPVNPSDINQIQGVYPSKPAKTTGFGTTEPAAPCGNEG   80 (175)
T ss_dssp             CEEEEEEEESSCSCHHHHCEEEEEEECTTSCCTTEEEEEEEEEEECHHHHHHHHTCSSCCCCCBSTTCCSSCBEECCSCC
T ss_pred             CceeEEEEEccCCCcccccEEEEEECCCCCCCcCEEEEEEEEeccCcceeEEEecCcccccccccccCCCCCCccccccc
Confidence            356888888743    2  3555678888899999999999999999999999886433211       35688999999


Q ss_pred             eEEEEEeCCCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCccch
Q 017916           82 AGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEG  161 (364)
Q Consensus        82 ~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~lP~~~~~~~a  161 (364)
                      +|+|+++|.++..++.||+|+...                           ...|+|+||+++++++++++|++++.+.|
T Consensus        81 ~g~V~~~~~~~~~~~~g~~v~~~~---------------------------~~~g~~aey~~v~~~~~~~iP~~~~~~~a  133 (175)
T d1gu7a1          81 LFEVIKVGSNVSSLEAGDWVIPSH---------------------------VNFGTWRTHALGNDDDFIKLPNPAQSKAN  133 (175)
T ss_dssp             EEEEEEECTTCCSCCTTCEEEESS---------------------------SCCCCSBSEEEEEGGGEEEECCHHHHHHT
T ss_pred             ccccccccccccccccccceeccc---------------------------cccccccceeeehhhhccCCCccchhhhh
Confidence            999999999999999999998652                           34589999999999999999998875555


Q ss_pred             hhhhhhHHHHHHHH--HcCCCCCCEEEEEc-C-CHHHHHHHHH
Q 017916          162 AMCEPLSVGLHACR--RANIGPETNVLIMG-A-GPIGLVTMLG  200 (364)
Q Consensus       162 a~~~~~~~a~~~l~--~~~~~~g~~VLI~G-a-g~~G~~ai~l  200 (364)
                      +.+ ...|||+++.  ..++++||+|||+| | |++|++++|+
T Consensus       134 ~~~-~~~ta~~~l~~~~~~~~~g~~vli~gaa~~gvG~~~iQ~  175 (175)
T d1gu7a1         134 GKP-NGLTDAKSIETLYDGTKPLHELYQDGVANSKDGKQLITY  175 (175)
T ss_dssp             TCS-CCCCCCCCEEEECCSSSCHHHHHHHHHHTGGGSCEEEEC
T ss_pred             ccc-hHHHHHHHHHHHhcCCCCCCEEEEECccchhhhheEEeC
Confidence            543 4456777763  36799999999997 4 7799988763

>d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=99.89  E-value=6.6e-23  Score=168.75  Aligned_cols=164  Identities=21%  Similarity=0.256  Sum_probs=127.8

Q ss_pred             CCccchhhhh-hhHHHHHHHH-HcCCCCCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEe
Q 017916          156 VSLEEGAMCE-PLSVGLHACR-RANIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVK  232 (364)
Q Consensus       156 ~~~~~aa~~~-~~~~a~~~l~-~~~~~~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~  232 (364)
                      +++++||+++ ++.|||++|. .+++++||+|||+|+ |++|++++|+|+..|+ .|++++++++|.++++++|++++++
T Consensus         1 isfe~AA~~~~~~~TA~~al~~~~~l~~g~~Vlv~ga~g~vG~~~iqlak~~Ga-~Vi~~~~s~~k~~~~~~lGa~~vi~   79 (179)
T d1qora2           1 ISFEQAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGA-KLIGTVGTAQKAQSALKAGAWQVIN   79 (179)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHTTSCCCTTCEEEESSTTBHHHHHHHHHHHHHTC-EEEEEESSHHHHHHHHHHTCSEEEE
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHhCCCCCCEEEEEccccccchHHHHHHHHhCC-eEeecccchHHHHHHHhcCCeEEEE
Confidence            5788999776 8889999995 478999999999987 8899999999999999 6888889999999999999999998


Q ss_pred             cCCCcccHHHHHHHHHHHcCCCccEEEECCCCHHHHHHHHHhcccCCEEEEEcCCC-CCccccchhhhhc-CcEEEeec-
Q 017916          233 VSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGH-HEMTVPLTPAAVR-EVDVVGVF-  309 (364)
Q Consensus       233 ~~~~~~~~~~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~-~~~~~~~~~~~~~-~~~~~~~~-  309 (364)
                      +.+  +++.+.+++++  .+.++|+++|++| ++.+..++.+++++|+++.++... .....+...+..+ .+.+.... 
T Consensus        80 ~~~--~d~~~~v~~~t--~g~g~d~v~d~~g-~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l  154 (179)
T d1qora2          80 YRE--EDLVERLKEIT--GGKKVRVVYDSVG-RDTWERSLDCLQRRGLMVSFGNSSGAVTGVNLGILNQKGSLYVTRPSL  154 (179)
T ss_dssp             TTT--SCHHHHHHHHT--TTCCEEEEEECSC-GGGHHHHHHTEEEEEEEEECCCTTCCCCCBCTHHHHHTTSCEEECCCH
T ss_pred             CCC--CCHHHHHHHHh--CCCCeEEEEeCcc-HHHHHHHHHHHhcCCeeeecccccCCccccchhhhhccceEEEEeeEE
Confidence            654  78988888765  4778999999999 678899999999999999988433 3333444443333 23332211 


Q ss_pred             ----cC----CCcHHHHHHHHHcC
Q 017916          310 ----RY----KNTWPLCLELLRSG  325 (364)
Q Consensus       310 ----~~----~~~~~~~~~~l~~g  325 (364)
                          ..    .+.++++++++++|
T Consensus       155 ~~~~~~~~~~~~~~~~l~~lv~~G  178 (179)
T d1qora2         155 QGYITTREELTEASNELFSLIASG  178 (179)
T ss_dssp             HHHCCSHHHHHHHHHHHHHHHHTT
T ss_pred             eeecCCHHHHHHHHHHHHHHHHCc
Confidence                11    23345666777765

>d1tt7a1 b.35.1.2 (A:2-127,A:295-330) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=99.89  E-value=2e-25  Score=180.32  Aligned_cols=151  Identities=21%  Similarity=0.199  Sum_probs=121.8

Q ss_pred             hcceeEEEec---CCceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCCCC
Q 017916           16 EVNMAAWLLG---VNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEV   92 (364)
Q Consensus        16 ~~~~~~~~~~---~~~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v   92 (364)
                      +.+||+++..   ...+++++++.|++++|||||||+|+|||++|+..+.|.+.  .....|.++|+|++|+|++  +.+
T Consensus         2 ~~~ka~~~~~~g~~~~l~~~~v~~p~l~~~eVLVkV~a~gin~~D~~~~~g~~~--~~~~~~~~~g~e~~G~v~~--~~~   77 (162)
T d1tt7a1           2 TLFQALQAEKNADDVSVHVKTISTEDLPKDGVLIKVAYSGINYKDGLAGKAGGN--IVREYPLILGIDAAGTVVS--SND   77 (162)
T ss_dssp             CEEEEEEECCGGGSCCCEEEEEESSSSCSSSEEEEECCEEECHHHHHHTSTTCT--TCSSCSEECCSEEEEEEEE--CSS
T ss_pred             CcEEEEEEEecCCCeEEEEEEcCCCCCCCCEEEEEEEEecccchhhheeeeccc--ccccceeeeeeeccccccc--ccc
Confidence            4578888883   46799999999999999999999999999999998887643  2356689999999999987  556


Q ss_pred             CCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCccchhhhh-hhHHHH
Q 017916           93 KTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGL  171 (364)
Q Consensus        93 ~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~lP~~~~~~~aa~~~-~~~~a~  171 (364)
                      +.+++||+|+..+...                      ....+|+|+||+.+++++++++|+++++++||+++ ...|||
T Consensus        78 ~~~~~g~~v~~~~~~~----------------------g~~~~G~~aey~~v~~~~l~~iP~~ls~~~Aa~~~~~~~ta~  135 (162)
T d1tt7a1          78 PRFAEGDEVIATSYEL----------------------GVSRDGGLSEYASVPGDWLVPLPQNLSLKEAMVDQLLTIVDR  135 (162)
T ss_dssp             TTCCTTCEEEEESTTB----------------------TTTBCCSSBSSEEECGGGEEECCTTCCHHHHHHSCSTTSEEE
T ss_pred             cccccceeeEeeeccc----------------------eeccccccceEEEecHHHEEECCCCCCHHHHHHHHHHHHHHH
Confidence            7899999998753211                      12467999999999999999999999999998776 566777


Q ss_pred             HHHHHcCCCCCCEEEEEcC-CH
Q 017916          172 HACRRANIGPETNVLIMGA-GP  192 (364)
Q Consensus       172 ~~l~~~~~~~g~~VLI~Ga-g~  192 (364)
                      .++...+...+++|||+|+ |.
T Consensus       136 ~~~~~~~~~~~~~Vli~ga~G~  157 (162)
T d1tt7a1         136 EVSLEETPGALKDILQNRIQGR  157 (162)
T ss_dssp             EECSTTHHHHHHHTTTTCCSSE
T ss_pred             HHHHhcCCCCCCEEEEECCcce
Confidence            6654334455577888876 54

>d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.89  E-value=8.9e-23  Score=166.29  Aligned_cols=144  Identities=24%  Similarity=0.407  Sum_probs=118.1

Q ss_pred             CCccchhhhh-hhHHHHHHHHHcCCCCCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEec
Q 017916          156 VSLEEGAMCE-PLSVGLHACRRANIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKV  233 (364)
Q Consensus       156 ~~~~~aa~~~-~~~~a~~~l~~~~~~~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~  233 (364)
                      +++++||+++ ++.|||++++++++++||+|||+|+ |++|++++|+|+.+|+ .|++++++++|.+.++++|+++++++
T Consensus         1 ls~eeAA~l~~~~~TA~~al~~~~~~~g~~VlI~ga~G~vG~~aiqlak~~G~-~vi~~~~~~~~~~~~~~lGa~~~i~~   79 (171)
T d1iz0a2           1 LSPEEAAAFPVSFLTAYLALKRAQARPGEKVLVQAAAGALGTAAVQVARAMGL-RVLAAASRPEKLALPLALGAEEAATY   79 (171)
T ss_dssp             CCHHHHHTSHHHHHHHHHHHHHTTCCTTCEEEESSTTBHHHHHHHHHHHHTTC-EEEEEESSGGGSHHHHHTTCSEEEEG
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHhCCCCCCEEEEEeccccchhhhhhhhccccc-ccccccccccccccccccccceeeeh
Confidence            4678888776 8999999998899999999999997 9999999999999999 67888888999999999999999986


Q ss_pred             CCCcccHHHHHHHHHHHcCCCccEEEECCCCHHHHHHHHHhcccCCEEEEEcCCC-CCccccchhhhhcCcEEEeeccC
Q 017916          234 STNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGH-HEMTVPLTPAAVREVDVVGVFRY  311 (364)
Q Consensus       234 ~~~~~~~~~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~  311 (364)
                      .+    .   .++.+  .+.++|++|||+|  +.+..++++|+++|+++.+|... ....++...++.|++++.|++..
T Consensus        80 ~~----~---~~~~~--~~~g~D~v~d~~G--~~~~~~~~~l~~~G~~v~~G~~~g~~~~~~~~~~~~k~~~i~g~~~~  147 (171)
T d1iz0a2          80 AE----V---PERAK--AWGGLDLVLEVRG--KEVEESLGLLAHGGRLVYIGAAEGEVAPIPPLRLMRRNLAVLGFWLT  147 (171)
T ss_dssp             GG----H---HHHHH--HTTSEEEEEECSC--TTHHHHHTTEEEEEEEEEC-------CCCCTTHHHHTTCEEEECCHH
T ss_pred             hh----h---hhhhh--ccccccccccccc--hhHHHHHHHHhcCCcEEEEeCCCCCCCCccHHHHHHCCcEEEEEeCc
Confidence            42    2   22222  3678999999988  35789999999999999998643 34466777888999999998653

>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=99.88  E-value=7.4e-23  Score=166.49  Aligned_cols=161  Identities=19%  Similarity=0.203  Sum_probs=129.4

Q ss_pred             Cccchhhhh-hhHHHHHHHHHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCC
Q 017916          157 SLEEGAMCE-PLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVST  235 (364)
Q Consensus       157 ~~~~aa~~~-~~~~a~~~l~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~  235 (364)
                      +++.+|.+. ...|+|++++++++++||+|||+|+|++|++++|+||++|++ +++++.+++|.++++++|+++++++..
T Consensus         5 ~~a~~Apl~Cag~Tay~al~~~~~~~G~~VlI~GaG~vG~~a~qlak~~Ga~-~i~~~~~~~~~~~a~~lGad~~i~~~~   83 (168)
T d1uufa2           5 QLAAVAPLLCAGITTYSPLRHWQAGPGKKVGVVGIGGLGHMGIKLAHAMGAH-VVAFTTSEAKREAAKALGADEVVNSRN   83 (168)
T ss_dssp             GHHHHGGGGTHHHHHHHHHHHTTCCTTCEEEEECCSHHHHHHHHHHHHTTCE-EEEEESSGGGHHHHHHHTCSEEEETTC
T ss_pred             cHHHHHHHHhHHHHHHHHHHHhCCCCCCEEEEeccchHHHHHHHHhhccccc-chhhccchhHHHHHhccCCcEEEECch
Confidence            344555443 567899999999999999999999999999999999999995 567888999999999999999998654


Q ss_pred             CcccHHHHHHHHHHHcCCCccEEEECCCCHHHHHHHHHhcccCCEEEEEcCCCCC-ccccchhhhhcCcEEEeeccC-CC
Q 017916          236 NLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHE-MTVPLTPAAVREVDVVGVFRY-KN  313 (364)
Q Consensus       236 ~~~~~~~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~  313 (364)
                      .  +.       .....+++|++|||+|++..++.++++++++|+++.+|..... ..++...++.+++++.|+... .+
T Consensus        84 ~--~~-------~~~~~~~~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~l~~k~~~i~Gs~~~~~~  154 (168)
T d1uufa2          84 A--DE-------MAAHLKSFDFILNTVAAPHNLDDFTTLLKRDGTMTLVGAPATPHKSPEVFNLIMKRRAIAGSMIGGIP  154 (168)
T ss_dssp             H--HH-------HHTTTTCEEEEEECCSSCCCHHHHHTTEEEEEEEEECCCC-------CHHHHHTTTCEEEECCSCCHH
T ss_pred             h--hH-------HHHhcCCCceeeeeeecchhHHHHHHHHhcCCEEEEeccCCCCcccccHHHHHHCCcEEEEEeecCHH
Confidence            2  11       1123568999999999888899999999999999999965443 345666788899999998765 77


Q ss_pred             cHHHHHHHHHcCCC
Q 017916          314 TWPLCLELLRSGKI  327 (364)
Q Consensus       314 ~~~~~~~~l~~g~~  327 (364)
                      ++++++++++++++
T Consensus       155 d~~e~l~l~a~~~I  168 (168)
T d1uufa2         155 ETQEMLDFCAEHGI  168 (168)
T ss_dssp             HHHHHHHHHHHHTC
T ss_pred             HHHHHHHHHHHcCC
Confidence            89999999988764

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=99.88  E-value=1.2e-21  Score=160.50  Aligned_cols=167  Identities=25%  Similarity=0.318  Sum_probs=133.2

Q ss_pred             Cccchhhhh-hhHHHHHHH-HHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecC
Q 017916          157 SLEEGAMCE-PLSVGLHAC-RRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVS  234 (364)
Q Consensus       157 ~~~~aa~~~-~~~~a~~~l-~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~  234 (364)
                      ++++||.+. .+.|+|+++ +.+++++||+|||+|+|++|++++++++.+|+.+|++++.+++|.++++++|+++++++.
T Consensus         2 Ple~aa~l~ca~~Tay~al~~~~~vk~GdtVlV~GaGG~G~~~~~~~~~~g~~~Vi~~~~~~~k~~~a~~~Ga~~~i~~~   81 (176)
T d2jhfa2           2 PLEKVCLIGCGFSTGYGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVNPQ   81 (176)
T ss_dssp             CHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEEECGG
T ss_pred             CHHHHhHhhcHHHHHHHHHHHhhCCCCCCEEEEECCCCcHHHHHHHHHHcCCceEEeecCcHHHHHHHHHhCCeeEEecC
Confidence            456788776 789999998 569999999999999999999999999999998999999999999999999999998865


Q ss_pred             CCcccHHHHHHHHHHHcCCCccEEEECCCCHHHHHHHHHhcccCCEEEEEc-CCCCCc-cccchhhhhcCcEEEeeccC-
Q 017916          235 TNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVG-MGHHEM-TVPLTPAAVREVDVVGVFRY-  311 (364)
Q Consensus       235 ~~~~~~~~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g-~~~~~~-~~~~~~~~~~~~~~~~~~~~-  311 (364)
                      +.+....+..+.   +.++++|++||++|.+.....++..+++++..+.++ ...... .......+.+++++.|+... 
T Consensus        82 ~~~~~~~~~~~~---~~~~G~D~vid~~G~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~Gs~~G~  158 (176)
T d2jhfa2          82 DYKKPIQEVLTE---MSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDSQNLSMNPMLLLSGRTWKGAIFGG  158 (176)
T ss_dssp             GCSSCHHHHHHH---HTTSCBSEEEECSCCHHHHHHHHHHBCTTTCEEEECSCCCTTCCEEECTHHHHTTCEEEECSGGG
T ss_pred             CchhHHHHHHHH---HhcCCCCEEEecCCchhHHHHHHHHHhcCCcceEEecCCCCcccccccHHHHhCCCEEEEEEEeC
Confidence            544333333332   246799999999999989999999999875554444 333332 33444567799999998653 


Q ss_pred             ---CCcHHHHHHHHHcCC
Q 017916          312 ---KNTWPLCLELLRSGK  326 (364)
Q Consensus       312 ---~~~~~~~~~~l~~g~  326 (364)
                         ++++.++++++.+||
T Consensus       159 ~~~~~~~~~li~~~~~GK  176 (176)
T d2jhfa2         159 FKSKDSVPKLVADFMAKK  176 (176)
T ss_dssp             CCHHHHHHHHHHHHHTTS
T ss_pred             CCHHHHHHHHHHHHHCcC
Confidence               567888999998875

>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

Probab=99.88  E-value=1.9e-21  Score=159.23  Aligned_cols=167  Identities=23%  Similarity=0.342  Sum_probs=136.4

Q ss_pred             Cccchhhhh-hhHHHHHHH-HHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecC
Q 017916          157 SLEEGAMCE-PLSVGLHAC-RRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVS  234 (364)
Q Consensus       157 ~~~~aa~~~-~~~~a~~~l-~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~  234 (364)
                      ++++||++. .+.|+|+++ +.+++++||+|+|+|+|++|+.++++++..|+.+|++++.+++|+++++++|+++++++.
T Consensus         2 P~e~aa~l~ca~~Tay~a~~~~a~~k~g~~VlI~G~Gg~g~~~~~~~~~~g~~~Vi~~~~~~~rl~~a~~~GAd~~in~~   81 (175)
T d1cdoa2           2 PLDTVCLLGCGVSTGFGAAVNTAKVEPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVFGATDFVNPN   81 (175)
T ss_dssp             CHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCCEEECGG
T ss_pred             CHHHHHHhhcHHHHHHHHHHHhhCCCCCCEEEEEecCCccchHHHHHHHHhhchheeecchHHHHHHHHHcCCcEEEcCC
Confidence            467788776 889999998 578999999999999999999999999999999999999999999999999999999875


Q ss_pred             CCcccHHHHHHHHHHHcCCCccEEEECCCCHHHHHHHHHhcccCCE-EEEEcCCCCCccccchhhhhcCcEEEeeccC--
Q 017916          235 TNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGK-VCLVGMGHHEMTVPLTPAAVREVDVVGVFRY--  311 (364)
Q Consensus       235 ~~~~~~~~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~-~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~--  311 (364)
                      ... ++.+.++...  .++++|++||++|+...+..++.+++++|. ++..+........+....+.++.++.|++..  
T Consensus        82 ~~~-~~~~~~~~~~--~~~G~d~vid~~G~~~~~~~a~~~~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~i~Gs~~G~~  158 (175)
T d1cdoa2          82 DHS-EPISQVLSKM--TNGGVDFSLECVGNVGVMRNALESCLKGWGVSVLVGWTDLHDVATRPIQLIAGRTWKGSMFGGF  158 (175)
T ss_dssp             GCS-SCHHHHHHHH--HTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECSCCSSSCEEECHHHHHTTCEEEECSGGGC
T ss_pred             Ccc-hhHHHHHHhh--ccCCcceeeeecCCHHHHHHHHHHhhCCCcceeEEEecCCcccCccHHHHHCCcEEEEEEEeCC
Confidence            432 3333444333  377999999999998888899998887754 4455555555566666777889999998654  


Q ss_pred             --CCcHHHHHHHHHcCC
Q 017916          312 --KNTWPLCLELLRSGK  326 (364)
Q Consensus       312 --~~~~~~~~~~l~~g~  326 (364)
                        ++++.++++++++||
T Consensus       159 ~~~~d~~~~i~l~~~gK  175 (175)
T d1cdoa2         159 KGKDGVPKMVKAYLDKK  175 (175)
T ss_dssp             CHHHHHHHHHHHHHTTS
T ss_pred             cHHHHHHHHHHHHHcCC
Confidence              567889999999885

>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=99.87  E-value=2.7e-21  Score=160.39  Aligned_cols=162  Identities=20%  Similarity=0.302  Sum_probs=131.8

Q ss_pred             hhhhhhhHHHHHHHHHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccH
Q 017916          161 GAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDI  240 (364)
Q Consensus       161 aa~~~~~~~a~~~l~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~  240 (364)
                      +++..+++|||++++.+++++|++|||+|+|++|++++++|+.+|+.+|++++.+++|.++++++|+++++++  ..+++
T Consensus         5 ~~l~d~~~ta~~a~~~a~v~~G~tVlV~GaG~vGl~a~~~ak~~ga~~Vi~~d~~~~rl~~a~~~Ga~~~~~~--~~~~~   82 (195)
T d1kola2           5 TCLSDILPTGYHGAVTAGVGPGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLNPARLAHAKAQGFEIADLS--LDTPL   82 (195)
T ss_dssp             GGGGTHHHHHHHHHHHTTCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCEEEETT--SSSCH
T ss_pred             HhcccHHHHHHHHHHHhCCCCCCEEEEECcCHHHHHHHHHHHhhcccceeeecccchhhHhhhhccccEEEeC--CCcCH
Confidence            3444599999999999999999999999999999999999999999999999999999999999999988764  44788


Q ss_pred             HHHHHHHHHHcCCCccEEEECCC---------------CHHHHHHHHHhcccCCEEEEEcCCCCCc-------------c
Q 017916          241 AEEVEKIQKAMGTGIDVSFDCAG---------------FNKTMSTALSATRAGGKVCLVGMGHHEM-------------T  292 (364)
Q Consensus       241 ~~~i~~~~~~~~~~~d~vid~~g---------------~~~~~~~~~~~l~~~G~~v~~g~~~~~~-------------~  292 (364)
                      .+.+++++  .+.++|++|||+|               .++.++.++++++++|+++.+|......             .
T Consensus        83 ~~~i~~~t--~g~g~D~vid~vG~~~~~~~~~~~~~~~~~~~l~~~~~~~r~gG~v~~~G~~~~~~~~~~~~~~~~~~~~  160 (195)
T d1kola2          83 HEQIAALL--GEPEVDCAVDAVGFEARGHGHEGAKHEAPATVLNSLMQVTRVAGKIGIPGLYVTEDPGAVDAAAKIGSLS  160 (195)
T ss_dssp             HHHHHHHH--SSSCEEEEEECCCTTCBCSSTTGGGSBCTTHHHHHHHHHEEEEEEEEECSCCCSCCTTCSSHHHHTTCCC
T ss_pred             HHHHHHHh--CCCCcEEEEECccccccCCcccceeecCcHHHHHHHHHHHhcCCEEEEeeecCCCcccchhhhhhcCcee
Confidence            88888775  4778999999998               3478999999999999999999643321             2


Q ss_pred             ccchhhhhcCcEEEeeccC-CCcHHHHHHHHHcCC
Q 017916          293 VPLTPAAVREVDVVGVFRY-KNTWPLCLELLRSGK  326 (364)
Q Consensus       293 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~g~  326 (364)
                      +....++.|++++.+.... ++.++++++++.+++
T Consensus       161 ~~~~~~~~k~~~i~~g~~~v~~~~~~Ll~~I~~~k  195 (195)
T d1kola2         161 IRFGLGWAKSHSFHTGQTPVMKYNRALMQAIMWDR  195 (195)
T ss_dssp             CCHHHHHHTTCEEEESSCCHHHHHHHHHHHHHTTS
T ss_pred             eeHHHHHhhcceeccCCCchHHHHHHHHHHHHcCC
Confidence            3333456677777653322 555778888887764

>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=99.87  E-value=3.6e-21  Score=157.21  Aligned_cols=163  Identities=20%  Similarity=0.328  Sum_probs=130.1

Q ss_pred             Cccchhhhh-hhHHHHHHH-HHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecC
Q 017916          157 SLEEGAMCE-PLSVGLHAC-RRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVS  234 (364)
Q Consensus       157 ~~~~aa~~~-~~~~a~~~l-~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~  234 (364)
                      +++.||.+. .+.|+|+++ +.+++++||+|+|+|+|++|+.++|+|+.+|+.+|++++.+++|+++++++|+++++++.
T Consensus         3 P~e~aa~l~Ca~~T~~~Av~~~~~~~~g~tVlI~G~GgvGl~ai~~ak~~G~~~Vi~vd~~~~kl~~Ak~~GA~~~in~~   82 (176)
T d1d1ta2           3 PPEKVCLIGCGFSTGYGAAVKTGKVKPGSTCVVFGLGGVGLSVIMGCKSAGASRIIGIDLNKDKFEKAMAVGATECISPK   82 (176)
T ss_dssp             CHHHHGGGGTHHHHHHHHHHTTSCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHHTCSEEECGG
T ss_pred             CHHHHHhhhhHHHHHHHHHHHhhCCCCCCEEEEECCCchhHHHHHHHHHcCCceEEEecCcHHHHHHHHhcCCcEEECcc
Confidence            577888886 899999998 568999999999999999999999999999998999999999999999999999999865


Q ss_pred             CCcccHHHHHHHHHHHcCCCccEEEECCCCHHHHHHHHHhcccC-CEEEEEcCCCCCccccch-hhhhcCcEEEeeccC-
Q 017916          235 TNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAG-GKVCLVGMGHHEMTVPLT-PAAVREVDVVGVFRY-  311 (364)
Q Consensus       235 ~~~~~~~~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~-  311 (364)
                      +. .+..+.+.+.  +.+.++|++||++|........+..+.++ |+++.+|........... ....++.++.|.+.. 
T Consensus        83 ~~-~~~~~~~~~~--~~g~G~d~vi~~~g~~~~~~~a~~~~~~~~G~~v~vG~~~~~~~~~~~~~~~~~~~~i~Gs~~G~  159 (176)
T d1d1ta2          83 DS-TKPISEVLSE--MTGNNVGYTFEVIGHLETMIDALASCHMNYGTSVVVGVPPSAKMLTYDPMLLFTGRTWKGCVFGG  159 (176)
T ss_dssp             GC-SSCHHHHHHH--HHTSCCCEEEECSCCHHHHHHHHTTSCTTTCEEEECSCCCTTCCEEECTHHHHTTCEEEECSGGG
T ss_pred             cc-chHHHHHHHH--hccccceEEEEeCCchHHHHHHHHHhhcCCeEEEEEEccccccccCCCHHHHhCCCEEEEEEEeC
Confidence            43 2333444433  34789999999999988888888877665 999999976555444333 345578899998754 


Q ss_pred             ---CCcHHHHHHHH
Q 017916          312 ---KNTWPLCLELL  322 (364)
Q Consensus       312 ---~~~~~~~~~~l  322 (364)
                         ++++.++++++
T Consensus       160 ~~~~~dip~li~~~  173 (176)
T d1d1ta2         160 LKSRDDVPKLVTEF  173 (176)
T ss_dssp             CCHHHHHHHHHHHH
T ss_pred             CCcHHHHHHHHHHH
Confidence               34555555554

>d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative zinc-binding alcohol dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.86  E-value=1.6e-21  Score=161.16  Aligned_cols=165  Identities=21%  Similarity=0.263  Sum_probs=124.0

Q ss_pred             CCccchhhhhhhHHHHHHH-HHcCCCCC--CEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHH-HHHHHcCCCeE
Q 017916          156 VSLEEGAMCEPLSVGLHAC-RRANIGPE--TNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRL-SVAKELGADNI  230 (364)
Q Consensus       156 ~~~~~aa~~~~~~~a~~~l-~~~~~~~g--~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~-~~~~~lg~~~~  230 (364)
                      +++...|+-.+..|||+++ +.+++++|  ++|||+|+ |++|++++|+||.+|+++|++++.++++. ++.+++|++++
T Consensus         2 ~~~~~galg~~glTA~~~l~~~~~~~~G~~etVLI~gaaGgVG~~aiQlak~~Ga~~vi~~~~~~e~~~~l~~~~gad~v   81 (187)
T d1vj1a2           2 LSYFLGAIGMPGLTSLIGVQEKGHISAGSNQTMVVSGAAGACGSLAGQIGHLLGCSRVVGICGTQEKCLFLTSELGFDAA   81 (187)
T ss_dssp             GGGGGTTTSHHHHHHHHHHHHHSCCCTTSCCEEEESSTTSTTGGGHHHHHHHTTCSEEEEEESSHHHHHHHHHHSCCSEE
T ss_pred             ccHHHHHhhcHHHHHHHHHHHHhCCCCCCCCEEEEECCCchhhHHHHHHHHHcCCcceecccchHHHHhhhhhcccceEE
Confidence            4555555445788999999 55888887  88999987 99999999999999998888877776655 45678999999


Q ss_pred             EecCCCcccHHHHHHHHHHHcCCCccEEEECCCCHHHHHHHHHhcccCCEEEEEcCCCC-----Ccccc-----chhhhh
Q 017916          231 VKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHH-----EMTVP-----LTPAAV  300 (364)
Q Consensus       231 ~~~~~~~~~~~~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-----~~~~~-----~~~~~~  300 (364)
                      +++..  +++.+.+++..   +.++|++||++| .+.++.++++|+++|+++.+|....     +....     ...+..
T Consensus        82 i~~~~--~~~~~~~~~~~---~~GvDvv~D~vG-g~~~~~~~~~l~~~G~iv~~G~~s~~~~~~~~~~~~~~~~~~~~~~  155 (187)
T d1vj1a2          82 VNYKT--GNVAEQLREAC---PGGVDVYFDNVG-GDISNTVISQMNENSHIILCGQISQYNKDVPYPPPLPPAVEAIRKE  155 (187)
T ss_dssp             EETTS--SCHHHHHHHHC---TTCEEEEEESSC-HHHHHHHHTTEEEEEEEEEC------------CCCCCHHHHHHHHH
T ss_pred             eeccc--hhHHHHHHHHh---ccCceEEEecCC-chhHHHHhhhccccccEEEeccccccccccccCCchHHHHHHHHHh
Confidence            99754  67887777764   578999999999 7889999999999999999984211     11111     112456


Q ss_pred             cCcEEEeeccC------CCcHHHHHHHHHcCC
Q 017916          301 REVDVVGVFRY------KNTWPLCLELLRSGK  326 (364)
Q Consensus       301 ~~~~~~~~~~~------~~~~~~~~~~l~~g~  326 (364)
                      |++++.++...      .+.++++.+++++|+
T Consensus       156 k~i~~~g~~~~~~~~~~~e~~~~l~~~i~~Gk  187 (187)
T d1vj1a2         156 RNITRERFTVLNYKDKFEPGILQLSQWFKEGK  187 (187)
T ss_dssp             TTCEEEECCGGGCGGGHHHHHHHHHHHHHHTS
T ss_pred             cceEEEEeEecchHHHHHHHHHHHHHHHHCcC
Confidence            88888886442      334677788888775

>d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=99.81  E-value=1e-19  Score=148.07  Aligned_cols=146  Identities=17%  Similarity=0.247  Sum_probs=116.8

Q ss_pred             CCccchhhhh-hhHHHHHHH---HHcC-CCCCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCe
Q 017916          156 VSLEEGAMCE-PLSVGLHAC---RRAN-IGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADN  229 (364)
Q Consensus       156 ~~~~~aa~~~-~~~~a~~~l---~~~~-~~~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~  229 (364)
                      +++.+|+.++ +..|||+++   +... .+++++|||+|+ |++|++++|+||.+|++ |++++++++|.+.++++|+++
T Consensus         1 l~~~~Aa~lg~aGlTA~~a~~~l~~~g~~~~~~~vlV~gasGGVG~~aiQlAk~~Ga~-Via~~~~~~k~~~~~~lGad~   79 (177)
T d1o89a2           1 LDARKAMIIGTAGFTAMLCVMALEDAGVRPQDGEIVVTGASGGVGSTAVALLHKLGYQ-VVAVSGRESTHEYLKSLGASR   79 (177)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCEEEESSTTSHHHHHHHHHHHHTTCC-EEEEESCGGGHHHHHHHTEEE
T ss_pred             CCHHHHHHcccHHHHHHHHHHHHHHhCCCCCCCcEEEEEccccchHHHHHHHHHcCCC-eEEEecchhHHHHHHhhcccc
Confidence            4678888776 778998765   3344 445679999987 99999999999999995 677778999999999999999


Q ss_pred             EEecCCCcccHHHHHHHHHHHcCCCccEEEECCCCHHHHHHHHHhcccCCEEEEEcCC-CCCccccchhhhhcCcEEEee
Q 017916          230 IVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMG-HHEMTVPLTPAAVREVDVVGV  308 (364)
Q Consensus       230 ~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~-~~~~~~~~~~~~~~~~~~~~~  308 (364)
                      ++++++.  ++.+.+      .....|.++|++| .+.+...+++|+++|+++.+|.. ......+...++.|++++.|+
T Consensus        80 vi~~~~~--~~~~~l------~~~~~~~vvD~Vg-g~~~~~~l~~l~~~Griv~~G~~~~~~~~~~~~~~~~k~~~i~G~  150 (177)
T d1o89a2          80 VLPRDEF--AESRPL------EKQVWAGAIDTVG-DKVLAKVLAQMNYGGCVAACGLAGGFTLPTTVMPFILRNVRLQGV  150 (177)
T ss_dssp             EEEGGGS--SSCCSS------CCCCEEEEEESSC-HHHHHHHHHTEEEEEEEEECCCTTCSCCCCCSHHHHHHCCEEEEC
T ss_pred             ccccccH--HHHHHH------HhhcCCeeEEEcc-hHHHHHHHHHhccccceEeecccCCccccccHHHHHHCCCeEEEE
Confidence            9997642  222111      2356799999999 78999999999999999999854 345567788899999999997


Q ss_pred             ccC
Q 017916          309 FRY  311 (364)
Q Consensus       309 ~~~  311 (364)
                      ...
T Consensus       151 ~~~  153 (177)
T d1o89a2         151 DSV  153 (177)
T ss_dssp             CSS
T ss_pred             ecc
Confidence            543

>d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=99.80  E-value=1.3e-19  Score=145.88  Aligned_cols=133  Identities=20%  Similarity=0.293  Sum_probs=107.5

Q ss_pred             HHHHH-HcCCCCCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHH
Q 017916          171 LHACR-RANIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQ  248 (364)
Q Consensus       171 ~~~l~-~~~~~~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~  248 (364)
                      +++|. ....+++++|||+|+ |++|.+++|+||++|+ .|+++.++++|.++++++|+++++++++...+   .   ..
T Consensus        12 ~~~L~~~g~~~~~~~VLV~gaaGgVG~~avQlAk~~Ga-~Viat~~s~~k~~~~~~lGad~vi~~~~~~~~---~---~~   84 (167)
T d1tt7a2          12 VHRLEQNGLSPEKGSVLVTGATGGVGGIAVSMLNKRGY-DVVASTGNREAADYLKQLGASEVISREDVYDG---T---LK   84 (167)
T ss_dssp             HHHHHHTTCCGGGCCEEEESTTSHHHHHHHHHHHHHTC-CEEEEESSSSTHHHHHHHTCSEEEEHHHHCSS---C---CC
T ss_pred             HHHHHHhcCCCCCCEEEEeCCcchHHHHHHHHHHHcCC-ceEEEecCHHHHHHHHhhcccceEeccchhch---h---hh
Confidence            34454 356677889999987 9999999999999999 57788889999999999999999876421111   1   11


Q ss_pred             HHcCCCccEEEECCCCHHHHHHHHHhcccCCEEEEEcCCC-CCccccchhhhhcCcEEEeeccC
Q 017916          249 KAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGH-HEMTVPLTPAAVREVDVVGVFRY  311 (364)
Q Consensus       249 ~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~  311 (364)
                      .+.++++|++||++| .+.+..++++|+++|+++.+|... ...+++...++.|++++.|....
T Consensus        85 ~~~~~gvd~vid~vg-g~~~~~~~~~l~~~G~iv~~G~~~g~~~~~~~~~l~~k~~~i~G~~~~  147 (167)
T d1tt7a2          85 ALSKQQWQGAVDPVG-GKQLASLLSKIQYGGSVAVSGLTGGGEVPATVYPFILRGVSLLGIDSV  147 (167)
T ss_dssp             SSCCCCEEEEEESCC-THHHHHHHTTEEEEEEEEECCCSSCSCEEECSHHHHTSCCEEEECCSS
T ss_pred             cccCCCceEEEecCc-HHHHHHHHHHhccCceEEEeeccCCCcccCCHHHHHHCCcEEEEEecC
Confidence            234678999999999 688999999999999999999644 45677888999999999997654

>d1v3va1 b.35.1.2 (A:1-112,A:295-329) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=99.61  E-value=1.1e-14  Score=113.71  Aligned_cols=120  Identities=14%  Similarity=0.058  Sum_probs=88.7

Q ss_pred             CceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhhcccCCccCCCCcccccceeEEEEEeCCCCCCCCCCCEEEEcCC
Q 017916           27 NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPG  106 (364)
Q Consensus        27 ~~~~~~~~~~p~~~~~~VlV~v~~~~l~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~  106 (364)
                      +.|++.+.++|++++||||||++|.+++|.......     .  ....-++..+++|+|++  ++.++|++||+|++.  
T Consensus        20 ~~f~l~e~~ip~~~~gevLvk~~~~svDp~~R~~~~-----~--~~~g~~~~g~~vg~Vv~--S~~~~f~~GD~V~g~--   88 (147)
T d1v3va1          20 SDFELKTVELPPLKNGEVLLEALFLSVDPYMRIASK-----R--LKEGAVMMGQQVARVVE--SKNSAFPAGSIVLAQ--   88 (147)
T ss_dssp             GGEEEEEEECCCCCTTCEEEEEEEEECCTHHHHHGG-----G--SCTTSBCCCCEEEEEEE--ESCTTSCTTCEEEEC--
T ss_pred             cceEEEEEECCCCCCCEEEEEEEEEeEccccccccc-----c--cccCCccccceEEEEEE--eCCCcccCCCEEEEc--
Confidence            569999999999999999999999999986544322     1  23334556688999987  566889999999864  


Q ss_pred             cCCCCCccccCCCCCCCCCccccccCCCCCcceeEEEecCCceEECCCCCCcc-----chhhh-hhhHH-HHHHHHHcCC
Q 017916          107 ISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLE-----EGAMC-EPLSV-GLHACRRANI  179 (364)
Q Consensus       107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~lP~~~~~~-----~aa~~-~~~~~-a~~~l~~~~~  179 (364)
                                                   ++|+||.+++.+.+.++|+..+..     ..+++ ....| ||.++. ...
T Consensus        89 -----------------------------~gw~ey~v~~~~~l~kv~~~~~~~~~~~~~~~~lG~~Gmtaay~gl~-~~~  138 (147)
T d1v3va1          89 -----------------------------SGWTTHFISDGKGLEKLLTEWPDKKIQYHEHVTKGFENMPAAFIEML-NGA  138 (147)
T ss_dssp             -----------------------------CCSBSEEEECSSSCEECCTTCCTTSSCCCEEEEECGGGHHHHHHHHH-TTC
T ss_pred             -----------------------------cCCEeEEEeccceeeEccccccccccchhhhHhccccchHHHHHHhh-CCC
Confidence                                         789999999999999998765432     22222 24444 555653 334


Q ss_pred             CCCCEEEE
Q 017916          180 GPETNVLI  187 (364)
Q Consensus       180 ~~g~~VLI  187 (364)
                      +.|++||+
T Consensus       139 k~Getvv~  146 (147)
T d1v3va1         139 NLGKAVVT  146 (147)
T ss_dssp             CSSEEEEE
T ss_pred             CCCCEEEe
Confidence            67999987

>d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=99.41  E-value=1.9e-13  Score=93.28  Aligned_cols=71  Identities=15%  Similarity=0.215  Sum_probs=61.0

Q ss_pred             CCccchhhhh-hhHHHHHHH----HHcCCCCCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCC
Q 017916          156 VSLEEGAMCE-PLSVGLHAC----RRANIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGA  227 (364)
Q Consensus       156 ~~~~~aa~~~-~~~~a~~~l----~~~~~~~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~  227 (364)
                      +++++|+.+. ...|||.++    +....+++++|||+|+ |++|.+++|+|+.+|+ .|+++++++++.+++++||+
T Consensus         1 ls~~eAa~lg~aGlTA~~al~~~~~~~~~~~~~~vlI~gasGgVG~~aiQlak~~G~-~Vi~~t~s~~k~~~~~~lGA   77 (77)
T d1o8ca2           1 LDARKAMIIGTAGFTAMLCVMALEDAGVRPQDGEIVVTGASGGVGSTAVALLHKLGY-QVVAVSGRESTHEYLKSLGA   77 (77)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCEEEESSTTSHHHHHHHHHHHHTTC-CEEEEESCGGGHHHHHHHTE
T ss_pred             CCHHHHHHhhhHHHHHHHHHHHHHhhhhccCCCcEEEEeCCCcHHHHHHHHHHHcCC-eEEEEECCHHHHHHHHHCCC
Confidence            4678888776 777888776    2366789999999987 9999999999999999 57888899999999999984

>d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: L-alanine dehydrogenase
species: Phormidium lapideum [TaxId: 32060]

Probab=98.12  E-value=3.4e-06  Score=65.32  Aligned_cols=97  Identities=21%  Similarity=0.273  Sum_probs=71.2

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcCCCccEEEE
Q 017916          181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  260 (364)
Q Consensus       181 ~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid  260 (364)
                      +..+|+|.|+|.+|+.|++.|+.+|+ .|.+.|.+.++.+.++......+......++.    +.+..    ...|++|.
T Consensus        31 ~pa~V~ViGaGvaG~~A~~~A~~lGA-~V~~~D~~~~~l~~l~~~~~~~~~~~~~~~~~----l~~~~----~~aDivI~  101 (168)
T d1pjca1          31 KPGKVVILGGGVVGTEAAKMAVGLGA-QVQIFDINVERLSYLETLFGSRVELLYSNSAE----IETAV----AEADLLIG  101 (168)
T ss_dssp             CCCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHGGGSEEEECCHHH----HHHHH----HTCSEEEE
T ss_pred             CCcEEEEECCChHHHHHHHHHhhCCC-EEEEEeCcHHHHHHHHHhhcccceeehhhhhh----HHHhh----ccCcEEEE
Confidence            46899999999999999999999999 78999999999988877543322111122222    32222    35899999


Q ss_pred             CCCCH------HHHHHHHHhcccCCEEEEEcC
Q 017916          261 CAGFN------KTMSTALSATRAGGKVCLVGM  286 (364)
Q Consensus       261 ~~g~~------~~~~~~~~~l~~~G~~v~~g~  286 (364)
                      ++-.+      -.-+++++.|++|+.++++..
T Consensus       102 aalipG~~aP~lIt~~mv~~Mk~GSVIVDvai  133 (168)
T d1pjca1         102 AVLVPGRRAPILVPASLVEQMRTGSVIVDVAV  133 (168)
T ss_dssp             CCCCTTSSCCCCBCHHHHTTSCTTCEEEETTC
T ss_pred             eeecCCcccCeeecHHHHhhcCCCcEEEEeec
Confidence            87432      133578999999999999874

>d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Nicotinamide nucleotide transhydrogenase dI component
species: Rhodospirillum rubrum [TaxId: 1085]

Probab=98.06  E-value=1.3e-05  Score=62.85  Aligned_cols=101  Identities=22%  Similarity=0.273  Sum_probs=72.3

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCC--------------cc----cHHH
Q 017916          181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTN--------------LQ----DIAE  242 (364)
Q Consensus       181 ~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~--------------~~----~~~~  242 (364)
                      +..+|+|.|+|.+|+.|++.|+.+|+ .|.+.|.+.++.+.+++++...+......              ++    ...+
T Consensus        28 ~pa~VvViGaGvaG~~Aa~~A~~lGA-~V~v~D~~~~~~~~l~~l~~~~i~~~~~~~~~~~~~~gyA~~~s~~~~~~~~~  106 (183)
T d1l7da1          28 PPARVLVFGVGVAGLQAIATAKRLGA-VVMATDVRAATKEQVESLGGKFITVDDEAMKTAETAGGYAKEMGEEFRKKQAE  106 (183)
T ss_dssp             CCCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCSTTHHHHHHTTCEECCC-----------------------CCHHH
T ss_pred             CCcEEEEEcCcHHHHHHHHHHHHcCC-EEEEEeccHHHHHHHHHhhcceEEEeccccccccccccchhhcCHHHHHHHHH
Confidence            45799999999999999999999999 79999999999999999886543110000              00    1111


Q ss_pred             HHHHHHHHcCCCccEEEECCCCH------HHHHHHHHhcccCCEEEEEcC
Q 017916          243 EVEKIQKAMGTGIDVSFDCAGFN------KTMSTALSATRAGGKVCLVGM  286 (364)
Q Consensus       243 ~i~~~~~~~~~~~d~vid~~g~~------~~~~~~~~~l~~~G~~v~~g~  286 (364)
                      .+.+.    -...|+||-++-.+      -.-+.+++.|+||+.++++..
T Consensus       107 ~l~~~----l~~aDlVI~talipG~~aP~lit~~mv~~Mk~GSVIVDvai  152 (183)
T d1l7da1         107 AVLKE----LVKTDIAITTALIPGKPAPVLITEEMVTKMKPGSVIIDLAV  152 (183)
T ss_dssp             HHHHH----HTTCSEEEECCCCTTSCCCCCSCHHHHTTSCTTCEEEETTG
T ss_pred             HHHHH----HHhhhhheeeeecCCcccceeehHHHHHhcCCCcEEEEEee
Confidence            22221    14689999876422      133578999999999999873

>d1dl5a1 c.66.1.7 (A:1-213) Protein-L-isoaspartyl O-methyltransferase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Thermotoga maritima [TaxId: 2336]

Probab=97.73  E-value=3.1e-05  Score=63.26  Aligned_cols=102  Identities=23%  Similarity=0.326  Sum_probs=72.0

Q ss_pred             HHHHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCC-EEEEEecChhHHHHHHH----cCCCeEEecCC-CcccHHHHHHH
Q 017916          173 ACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAP-RIVIVDVDDYRLSVAKE----LGADNIVKVST-NLQDIAEEVEK  246 (364)
Q Consensus       173 ~l~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~-~vv~~~~~~~~~~~~~~----lg~~~~~~~~~-~~~~~~~~i~~  246 (364)
                      .++..++++|++||-.|+|. |..++.+|+..|.+ .|++++.+++..+.+++    .+...+..... ....+      
T Consensus        67 ~l~~l~l~~g~~VLdiG~Gt-G~~s~~la~~~~~~g~V~~id~~~~~~~~a~~~~~~~~~~n~~~~~~d~~~~~------  139 (213)
T d1dl5a1          67 FMEWVGLDKGMRVLEIGGGT-GYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCGDGYYGV------  139 (213)
T ss_dssp             HHHHTTCCTTCEEEEECCTT-SHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCC------
T ss_pred             HHHhhhccccceEEEecCcc-chhHHHHHHHhCCCCcEEEeecchhhHHHhhhhHhhhcccccccccCchHHcc------
Confidence            56888999999999999866 78888999987643 68999988887766654    45544332211 11111      


Q ss_pred             HHHHcCCCccEEEECCCCHHHHHHHHHhcccCCEEEEE
Q 017916          247 IQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLV  284 (364)
Q Consensus       247 ~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~  284 (364)
                         .....||+|+.+.+-....+.+++.|+|||+++..
T Consensus       140 ---~~~~~fD~I~~~~~~~~~p~~l~~~LkpGG~lv~p  174 (213)
T d1dl5a1         140 ---PEFSPYDVIFVTVGVDEVPETWFTQLKEGGRVIVP  174 (213)
T ss_dssp             ---GGGCCEEEEEECSBBSCCCHHHHHHEEEEEEEEEE
T ss_pred             ---ccccchhhhhhhccHHHhHHHHHHhcCCCcEEEEE
Confidence               01357999998766555556789999999999873

>d1jg1a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=97.70  E-value=2.4e-05  Score=63.87  Aligned_cols=104  Identities=18%  Similarity=0.216  Sum_probs=73.3

Q ss_pred             HHHHHHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHH----HHHcCCCeEEecCCCcccHHHHHHH
Q 017916          171 LHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSV----AKELGADNIVKVSTNLQDIAEEVEK  246 (364)
Q Consensus       171 ~~~l~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~----~~~lg~~~~~~~~~~~~~~~~~i~~  246 (364)
                      ..+++..++++|++||..|+|. |..++.+|+..|. .|++++..++-.+.    ++++|.+++.....+   ..+.   
T Consensus        68 a~ml~~L~l~~g~~VLeIGsGs-GY~taila~l~g~-~V~~ie~~~~l~~~a~~~l~~~g~~nv~~~~gd---~~~g---  139 (215)
T d1jg1a_          68 AIMLEIANLKPGMNILEVGTGS-GWNAALISEIVKT-DVYTIERIPELVEFAKRNLERAGVKNVHVILGD---GSKG---  139 (215)
T ss_dssp             HHHHHHHTCCTTCCEEEECCTT-SHHHHHHHHHHCS-CEEEEESCHHHHHHHHHHHHHTTCCSEEEEESC---GGGC---
T ss_pred             HHHHHhhccCccceEEEecCCC-ChhHHHHHHhhCc-eeEEEeccHHHHHHHHHHHHHcCCceeEEEECc---cccC---
Confidence            3456888999999999999765 7888889988885 58888888754444    445787665433221   1100   


Q ss_pred             HHHHcCCCccEEEECCCCHHHHHHHHHhcccCCEEEEE
Q 017916          247 IQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLV  284 (364)
Q Consensus       247 ~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~  284 (364)
                      +  ....+||.|+.+.+....-..+++.|++||+++..
T Consensus       140 ~--~~~~pfD~Iiv~~a~~~ip~~l~~qL~~gGrLv~p  175 (215)
T d1jg1a_         140 F--PPKAPYDVIIVTAGAPKIPEPLIEQLKIGGKLIIP  175 (215)
T ss_dssp             C--GGGCCEEEEEECSBBSSCCHHHHHTEEEEEEEEEE
T ss_pred             C--cccCcceeEEeecccccCCHHHHHhcCCCCEEEEE
Confidence            0  11467999988766555556789999999999874

>d1o54a_ c.66.1.13 (A:) Hypothetical protein TM0748 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Hypothetical protein TM0748
species: Thermotoga maritima [TaxId: 2336]

Probab=97.63  E-value=0.00011  Score=61.94  Aligned_cols=107  Identities=18%  Similarity=0.225  Sum_probs=73.3

Q ss_pred             HHHHHHHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCC-EEEEEecChhHHHHHHH----cCCCeEEecCCCcccHHHHH
Q 017916          170 GLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAP-RIVIVDVDDYRLSVAKE----LGADNIVKVSTNLQDIAEEV  244 (364)
Q Consensus       170 a~~~l~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~-~vv~~~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~i  244 (364)
                      +.+.+..++++||++||=.|+|. |..++.+|+..|.. .|++++.+++..+.+++    ++.........  .+...  
T Consensus        92 ~~~Ii~~l~i~pG~~VLDiG~Gs-G~lt~~lA~~~~~~G~V~~vD~~~~~~~~A~~~~~~~g~~~~v~~~~--~d~~~--  166 (266)
T d1o54a_          92 SSFIAMMLDVKEGDRIIDTGVGS-GAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLIERVTIKV--RDISE--  166 (266)
T ss_dssp             HHHHHHHTTCCTTCEEEEECCTT-SHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEEC--CCGGG--
T ss_pred             HHHHHHhhCCCCCCEEEECCCCC-CHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhccccCcEEEe--ccccc--
Confidence            33456789999999999999866 77888999987643 79999999988777654    45422111111  11110  


Q ss_pred             HHHHHHcCCCccEEEECCCC-HHHHHHHHHhcccCCEEEEEc
Q 017916          245 EKIQKAMGTGIDVSFDCAGF-NKTMSTALSATRAGGKVCLVG  285 (364)
Q Consensus       245 ~~~~~~~~~~~d~vid~~g~-~~~~~~~~~~l~~~G~~v~~g  285 (364)
                          ......+|.|+--... .+.+..+.+.|+|||+++.+.
T Consensus       167 ----~~~~~~~D~V~~d~p~p~~~l~~~~~~LKpGG~lv~~~  204 (266)
T d1o54a_         167 ----GFDEKDVDALFLDVPDPWNYIDKCWEALKGGGRFATVC  204 (266)
T ss_dssp             ----CCSCCSEEEEEECCSCGGGTHHHHHHHEEEEEEEEEEE
T ss_pred             ----cccccceeeeEecCCCHHHHHHHHHhhcCCCCEEEEEe
Confidence                0113468877644443 568899999999999999874

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

Probab=97.56  E-value=0.00026  Score=59.05  Aligned_cols=103  Identities=22%  Similarity=0.257  Sum_probs=73.2

Q ss_pred             CCCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecC-CCcccHHHHHHHHHHHcCCCccE
Q 017916          180 GPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVS-TNLQDIAEEVEKIQKAMGTGIDV  257 (364)
Q Consensus       180 ~~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~-~~~~~~~~~i~~~~~~~~~~~d~  257 (364)
                      -+|.++||+|+ +++|.+.++.+...|+ .|+.+++++++.+..++++...+ ..| ...++..+.+++..+.. +++|+
T Consensus         3 l~GK~alITGas~GIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~-~~Dv~~~~~v~~~~~~~~~~~-G~iDi   79 (248)
T d2d1ya1           3 FAGKGVLVTGGARGIGRAIAQAFAREGA-LVALCDLRPEGKEVAEAIGGAFF-QVDLEDERERVRFVEEAAYAL-GRVDV   79 (248)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSTTHHHHHHHHTCEEE-ECCTTCHHHHHHHHHHHHHHH-SCCCE
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHcCCeEE-EEeCCCHHHHHHHHHHHHHhc-CCCCe
Confidence            36899999998 9999999999999999 67888888888888888876532 222 22344444455544433 47999


Q ss_pred             EEECCCCH-------------------------HHHHHHHHhccc--CCEEEEEc
Q 017916          258 SFDCAGFN-------------------------KTMSTALSATRA--GGKVCLVG  285 (364)
Q Consensus       258 vid~~g~~-------------------------~~~~~~~~~l~~--~G~~v~~g  285 (364)
                      +|+++|..                         ...+.++..|.+  +|+++.++
T Consensus        80 LVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Ii~is  134 (248)
T d2d1ya1          80 LVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVA  134 (248)
T ss_dssp             EEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEEC
T ss_pred             EEEeCcCCCCCChhhCCHHHHHHHHHhhhhhHhhhhhhhcccccccccccccccc
Confidence            99988742                         134455566643  58898886

>d1yb2a1 c.66.1.13 (A:6-255) Hypothetical protein Ta0852 {Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Hypothetical protein Ta0852
species: Thermoplasma acidophilum [TaxId: 2303]

Probab=97.50  E-value=0.00012  Score=60.95  Aligned_cols=103  Identities=18%  Similarity=0.227  Sum_probs=69.9

Q ss_pred             HHHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCC-EEEEEecChhHHHHHHH----cC-CCeEEecCCCcccHHHHHHHH
Q 017916          174 CRRANIGPETNVLIMGAGPIGLVTMLGARAFGAP-RIVIVDVDDYRLSVAKE----LG-ADNIVKVSTNLQDIAEEVEKI  247 (364)
Q Consensus       174 l~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~-~vv~~~~~~~~~~~~~~----lg-~~~~~~~~~~~~~~~~~i~~~  247 (364)
                      +...+++||++||-.|+|. |.++..+|+..|.+ .|++++.+++..+.+++    ++ ...+....   .|+.+.+   
T Consensus        78 i~~l~i~pG~rVLEiG~Gs-G~lt~~la~~v~~~g~V~~vD~~e~~~~~A~~n~~~~~~~~nv~~~~---~Di~~~~---  150 (250)
T d1yb2a1          78 IMRCGLRPGMDILEVGVGS-GNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDIGNVRTSR---SDIADFI---  150 (250)
T ss_dssp             ---CCCCTTCEEEEECCTT-SHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCCTTEEEEC---SCTTTCC---
T ss_pred             HHHcCCCCcCEEEEeeeeC-cHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHhcCCCceEEEE---eeeeccc---
Confidence            4668999999999998765 67888899887543 79999999988877664    22 33322221   1221111   


Q ss_pred             HHHcCCCccEEE-ECCCCHHHHHHHHHhcccCCEEEEEcC
Q 017916          248 QKAMGTGIDVSF-DCAGFNKTMSTALSATRAGGKVCLVGM  286 (364)
Q Consensus       248 ~~~~~~~~d~vi-d~~g~~~~~~~~~~~l~~~G~~v~~g~  286 (364)
                         ....+|.|| |.....+.+..+.+.|+|||+++.+..
T Consensus       151 ---~~~~fD~V~ld~p~p~~~l~~~~~~LKpGG~lv~~~P  187 (250)
T d1yb2a1         151 ---SDQMYDAVIADIPDPWNHVQKIASMMKPGSVATFYLP  187 (250)
T ss_dssp             ---CSCCEEEEEECCSCGGGSHHHHHHTEEEEEEEEEEES
T ss_pred             ---ccceeeeeeecCCchHHHHHHHHHhcCCCceEEEEeC
Confidence               135699887 544445688899999999999998743

>d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase-like protein HI0607
species: Haemophilus influenzae [TaxId: 727]

Probab=97.43  E-value=0.00042  Score=53.92  Aligned_cols=74  Identities=11%  Similarity=0.157  Sum_probs=56.4

Q ss_pred             HHHHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHH-HHcCCCeEEecCCCcccHHHHHHHHHHHc
Q 017916          173 ACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KELGADNIVKVSTNLQDIAEEVEKIQKAM  251 (364)
Q Consensus       173 ~l~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~-~~lg~~~~~~~~~~~~~~~~~i~~~~~~~  251 (364)
                      .|+..++.++.+|||.|+|+++.+++.-++..|++.+.++.++.+|.+.+ +.++........                 
T Consensus         8 ~l~~~~~~~~~~vlIlGaGGaarai~~aL~~~g~~~I~I~nR~~~ka~~L~~~~~~~~~~~~~-----------------   70 (167)
T d1npya1           8 LIEKYHLNKNAKVIVHGSGGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALYGYAYINSLE-----------------   70 (167)
T ss_dssp             HHHHTTCCTTSCEEEECSSTTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHHTCEEESCCT-----------------
T ss_pred             HHHHcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCEEEEecccHHHHHHHHHhhhhhhhhccc-----------------
Confidence            45667777889999999999999999999999998888898988887655 446654321110                 


Q ss_pred             CCCccEEEECCC
Q 017916          252 GTGIDVSFDCAG  263 (364)
Q Consensus       252 ~~~~d~vid~~g  263 (364)
                      ...+|++|+|+.
T Consensus        71 ~~~~DliINaTp   82 (167)
T d1npya1          71 NQQADILVNVTS   82 (167)
T ss_dssp             TCCCSEEEECSS
T ss_pred             ccchhhheeccc
Confidence            246899999865

>d1vbfa_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Sulfolobus tokodaii [TaxId: 111955]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Sulfolobus tokodaii [TaxId: 111955]

Probab=97.40  E-value=0.00023  Score=58.19  Aligned_cols=101  Identities=19%  Similarity=0.196  Sum_probs=69.6

Q ss_pred             HHHHHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcC--CCeEEe-cCCCcccHHHHHHHHH
Q 017916          172 HACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELG--ADNIVK-VSTNLQDIAEEVEKIQ  248 (364)
Q Consensus       172 ~~l~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg--~~~~~~-~~~~~~~~~~~i~~~~  248 (364)
                      .+++..++++|++||-.|+|. |..++.+|+.. . .|++++.+++..+.+++.-  ...+.. ..+....+.       
T Consensus        61 ~ml~~L~l~~g~~VLdIG~Gs-Gy~ta~La~l~-~-~V~aiE~~~~~~~~A~~~~~~~~nv~~~~~d~~~g~~-------  130 (224)
T d1vbfa_          61 FMLDELDLHKGQKVLEIGTGI-GYYTALIAEIV-D-KVVSVEINEKMYNYASKLLSYYNNIKLILGDGTLGYE-------  130 (224)
T ss_dssp             HHHHHTTCCTTCEEEEECCTT-SHHHHHHHHHS-S-EEEEEESCHHHHHHHHHHHTTCSSEEEEESCGGGCCG-------
T ss_pred             HHHHHhhhcccceEEEecCCC-CHHHHHHHHHh-c-ccccccccHHHHHHHHHHHhcccccccccCchhhcch-------
Confidence            356888999999999999764 77777788864 3 6899999998888776632  222111 111111111       


Q ss_pred             HHcCCCccEEEECCCCHHHHHHHHHhcccCCEEEEE
Q 017916          249 KAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLV  284 (364)
Q Consensus       249 ~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~  284 (364)
                        ...+||.|+-+.+.+.....+++.|++||+++..
T Consensus       131 --~~~pfD~Iiv~~a~~~ip~~l~~qLk~GGrLV~p  164 (224)
T d1vbfa_         131 --EEKPYDRVVVWATAPTLLCKPYEQLKEGGIMILP  164 (224)
T ss_dssp             --GGCCEEEEEESSBBSSCCHHHHHTEEEEEEEEEE
T ss_pred             --hhhhHHHHHhhcchhhhhHHHHHhcCCCCEEEEE
Confidence              1357999987666556666789999999999874

>d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamyl tRNA-reductase middle domain
species: Archaeon Methanopyrus kandleri [TaxId: 2320]

Probab=97.34  E-value=0.0029  Score=48.47  Aligned_cols=95  Identities=17%  Similarity=0.279  Sum_probs=64.5

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHH-HHHHcCCCeEEecCCCcccHHHHHHHHHHHcCCCccEE
Q 017916          180 GPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLS-VAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVS  258 (364)
Q Consensus       180 ~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~-~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~v  258 (364)
                      -.+.+|||.|+|.+|..+++.+...|++.+.++.++.+|.+ +++++|.. ...+    .++.+.+        ..+|++
T Consensus        22 l~~~~ilviGaG~~g~~v~~~L~~~g~~~i~v~nRt~~ka~~l~~~~~~~-~~~~----~~~~~~l--------~~~Div   88 (159)
T d1gpja2          22 LHDKTVLVVGAGEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLGGE-AVRF----DELVDHL--------ARSDVV   88 (159)
T ss_dssp             CTTCEEEEESCCHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHTCE-ECCG----GGHHHHH--------HTCSEE
T ss_pred             cccCeEEEECCCHHHHHHHHHHHhcCCcEEEEEcCcHHHHHHHHHhhhcc-cccc----hhHHHHh--------ccCCEE
Confidence            46789999999999999999999999988888888877754 66778854 3333    2333222        369999


Q ss_pred             EECCCCH------HHHHHHHHhcccCC--EEEEEcCC
Q 017916          259 FDCAGFN------KTMSTALSATRAGG--KVCLVGMG  287 (364)
Q Consensus       259 id~~g~~------~~~~~~~~~l~~~G--~~v~~g~~  287 (364)
                      |.|++++      +.+...++.-+.+.  .+++++.+
T Consensus        89 i~atss~~~ii~~~~i~~~~~~r~~~~~~~iiDlavP  125 (159)
T d1gpja2          89 VSATAAPHPVIHVDDVREALRKRDRRSPILIIDIANP  125 (159)
T ss_dssp             EECCSSSSCCBCHHHHHHHHHHCSSCCCEEEEECCSS
T ss_pred             EEecCCCCccccHhhhHHHHHhcccCCCeEEEeecCC
Confidence            9999864      33333333333333  45666543

>d1i1na_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.29  E-value=0.00036  Score=57.10  Aligned_cols=104  Identities=16%  Similarity=0.151  Sum_probs=69.4

Q ss_pred             HHHHHHc--CCCCCCEEEEEcCCHHHHHHHHHHHHCCCC-EEEEEecChhHHHHHHH----cCC-----CeEEe-cCCCc
Q 017916          171 LHACRRA--NIGPETNVLIMGAGPIGLVTMLGARAFGAP-RIVIVDVDDYRLSVAKE----LGA-----DNIVK-VSTNL  237 (364)
Q Consensus       171 ~~~l~~~--~~~~g~~VLI~Gag~~G~~ai~la~~~g~~-~vv~~~~~~~~~~~~~~----lg~-----~~~~~-~~~~~  237 (364)
                      ..+++..  ++++|++||-.|+|. |..++.+|+..|.. .|++++.+++-.+.+++    .+.     ..+.. ..+..
T Consensus        64 a~~le~L~~~l~~g~~VLdiG~Gs-Gy~ta~la~l~~~~g~V~~ie~~~~l~~~a~~~l~~~~~~~~~~~~~~~~~gD~~  142 (224)
T d1i1na_          64 AYALELLFDQLHEGAKALDVGSGS-GILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGR  142 (224)
T ss_dssp             HHHHHHTTTTSCTTCEEEEETCTT-SHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGG
T ss_pred             HHHHHHHhhccCCCCeEEEecCCC-CHHHHHHHHHhCCCceEEEEcCCHHHHHHHHHhccccCcccccccceEEEEeecc
Confidence            3455654  789999999999765 78888999987643 79999998877665532    222     11111 10100


Q ss_pred             ccHHHHHHHHHHHcCCCccEEEECCCCHHHHHHHHHhcccCCEEEEE
Q 017916          238 QDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLV  284 (364)
Q Consensus       238 ~~~~~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~  284 (364)
                      ..+         .....||+|+.+.........+++.|+|||+++..
T Consensus       143 ~~~---------~~~~~fD~I~~~~~~~~ip~~l~~~LkpGG~LV~p  180 (224)
T d1i1na_         143 MGY---------AEEAPYDAIHVGAAAPVVPQALIDQLKPGGRLILP  180 (224)
T ss_dssp             GCC---------GGGCCEEEEEECSBBSSCCHHHHHTEEEEEEEEEE
T ss_pred             ccc---------chhhhhhhhhhhcchhhcCHHHHhhcCCCcEEEEE
Confidence            000         01357999998766556667889999999999874

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

Probab=97.20  E-value=0.0025  Score=52.59  Aligned_cols=103  Identities=21%  Similarity=0.296  Sum_probs=69.4

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHH-HHcCCCe-EEecC-CCcccHHHHHHHHHHHcCCCcc
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KELGADN-IVKVS-TNLQDIAEEVEKIQKAMGTGID  256 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~-~~lg~~~-~~~~~-~~~~~~~~~i~~~~~~~~~~~d  256 (364)
                      +|.++||+|+ +++|.+.++.+...|+ .|+.+++++++.+.+ ++++... .+..| ...++..+.++...+. -+++|
T Consensus         3 ~gK~alITGas~GIG~a~a~~l~~~G~-~Vv~~~r~~~~l~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~-~g~iD   80 (243)
T d1q7ba_           3 EGKIALVTGASRGIGRAIAETLAARGA-KVIGTATSENGAQAISDYLGANGKGLMLNVTDPASIESVLEKIRAE-FGEVD   80 (243)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHH-TCSCS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhCCCCcEEEEEecCHHHhhhhhhhhhcc-cCCcc
Confidence            5789999998 9999999999999999 577788888776544 5565432 22222 2234444455555443 35899


Q ss_pred             EEEECCCCH-------------------------HHHHHHHHhc--ccCCEEEEEc
Q 017916          257 VSFDCAGFN-------------------------KTMSTALSAT--RAGGKVCLVG  285 (364)
Q Consensus       257 ~vid~~g~~-------------------------~~~~~~~~~l--~~~G~~v~~g  285 (364)
                      ++++++|..                         ...+.++..|  +.+|+++.++
T Consensus        81 ilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~II~is  136 (243)
T d1q7ba_          81 ILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKRHGRIITIG  136 (243)
T ss_dssp             EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEC
T ss_pred             eehhhhhhccccccccccccccccccceeechhhhhHHHHHHHHHHcCCCEeeeec
Confidence            999988742                         2444556666  3469999886

>d1kpia_ c.66.1.18 (A:) CmaA2 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: CmaA2
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.18  E-value=0.0014  Score=55.72  Aligned_cols=100  Identities=14%  Similarity=0.195  Sum_probs=68.8

Q ss_pred             HHHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHH----HcCCCeEEecCCCcccHHHHHHHHHH
Q 017916          174 CRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAK----ELGADNIVKVSTNLQDIAEEVEKIQK  249 (364)
Q Consensus       174 l~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~----~lg~~~~~~~~~~~~~~~~~i~~~~~  249 (364)
                      ++++++++|++||=.|.|- |..+..+|+..|+ .+++++.+++..+.++    ..|....+.+..  .+.        .
T Consensus        54 ~~~l~l~~G~~VLDiGCG~-G~~~~~~a~~~g~-~v~git~s~~q~~~a~~~~~~~~l~~~v~~~~--~d~--------~  121 (291)
T d1kpia_          54 LDKLNLEPGMTLLDIGCGW-GSTMRHAVAEYDV-NVIGLTLSENQYAHDKAMFDEVDSPRRKEVRI--QGW--------E  121 (291)
T ss_dssp             HHTTCCCTTCEEEEETCTT-SHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHHSCCSSCEEEEE--CCG--------G
T ss_pred             HHhcCCCCCCEEEEecCcc-hHHHHHHHHhcCc-ceeeccchHHHHHHHHHHHHhhccchhhhhhh--hcc--------c
Confidence            3779999999999999754 4467889999999 7889999988755543    456543222111  111        0


Q ss_pred             HcCCCccEEEE-----CCCC----------HHHHHHHHHhcccCCEEEEEc
Q 017916          250 AMGTGIDVSFD-----CAGF----------NKTMSTALSATRAGGKVCLVG  285 (364)
Q Consensus       250 ~~~~~~d~vid-----~~g~----------~~~~~~~~~~l~~~G~~v~~g  285 (364)
                      ...+.||.|+.     .++.          +..++.+.++|+|+|+++.-.
T Consensus       122 ~~~~~fD~i~sie~~eH~~~~~~~~~~~~~~~~f~~i~~~LkpgG~~~l~~  172 (291)
T d1kpia_         122 EFDEPVDRIVSLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLHT  172 (291)
T ss_dssp             GCCCCCSEEEEESCGGGTTCCSSCCSTTHHHHHHHHHHHTSCTTCEEEEEE
T ss_pred             ccccccceEeechhHHhcchhhhhhHHHHHHHHHHHHHHhCCCCCceEEEE
Confidence            11457998875     3442          357888999999999998653

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

Probab=97.16  E-value=0.0019  Score=53.39  Aligned_cols=81  Identities=25%  Similarity=0.330  Sum_probs=57.8

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHH-HHcCCCeEEecC-CCcccHHHHHHHHHHHcCCCccE
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KELGADNIVKVS-TNLQDIAEEVEKIQKAMGTGIDV  257 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~-~~lg~~~~~~~~-~~~~~~~~~i~~~~~~~~~~~d~  257 (364)
                      +|.++||+|+ +++|.+.++.+...|+ .|+.+++++++.+.+ +++++..+ ..| ...+++.+.++...+.. +++|+
T Consensus         4 ~gK~~lITGas~GIG~aia~~l~~~G~-~V~~~~r~~~~l~~~~~~~~~~~~-~~Dv~~~~~v~~~~~~~~~~~-g~iDi   80 (242)
T d1ulsa_           4 KDKAVLITGAAHGIGRATLELFAKEGA-RLVACDIEEGPLREAAEAVGAHPV-VMDVADPASVERGFAEALAHL-GRLDG   80 (242)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTTTCEEE-ECCTTCHHHHHHHHHHHHHHH-SSCCE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHcCCeEE-EEecCCHHHHHHHHHHHHHhc-CCceE
Confidence            4789999998 9999999999999999 678888888776654 45665432 222 23344555555554443 47999


Q ss_pred             EEECCCC
Q 017916          258 SFDCAGF  264 (364)
Q Consensus       258 vid~~g~  264 (364)
                      +|+++|.
T Consensus        81 lVnnAG~   87 (242)
T d1ulsa_          81 VVHYAGI   87 (242)
T ss_dssp             EEECCCC
T ss_pred             EEECCcc
Confidence            9999874

>d1i9ga_ c.66.1.13 (A:) Probable methyltransferase Rv2118c {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Probable methyltransferase Rv2118c
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.13  E-value=0.0013  Score=54.96  Aligned_cols=104  Identities=22%  Similarity=0.255  Sum_probs=72.0

Q ss_pred             HHHHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCC-EEEEEecChhHHHHHHH----c---CCCeEEecCCCcccHHHHH
Q 017916          173 ACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAP-RIVIVDVDDYRLSVAKE----L---GADNIVKVSTNLQDIAEEV  244 (364)
Q Consensus       173 ~l~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~-~vv~~~~~~~~~~~~~~----l---g~~~~~~~~~~~~~~~~~i  244 (364)
                      .+..++++||++||=.|+|. |.+++.||++.|.+ .+++++.+++..+.+++    +   ..+.+.....   |..+  
T Consensus        88 Ii~~l~i~PG~~VLE~G~Gs-G~lt~~La~~vgp~G~V~~~d~~~~~~~~Ar~n~~~~~~~~~~nv~~~~~---d~~~--  161 (264)
T d1i9ga_          88 IVHEGDIFPGARVLEAGAGS-GALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVS---DLAD--  161 (264)
T ss_dssp             HHHHTTCCTTCEEEEECCTT-SHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECS---CGGG--
T ss_pred             HHHHhCCCCCCEEEecCcCC-cHHHHHHHHhhCCCcEEEEecCCHHHHHHHHHhhhhhccCCCceEEEEec---cccc--
Confidence            45779999999999998765 78889999998754 79999999988877754    2   1233222111   1110  


Q ss_pred             HHHHHHcCCCccEEE-ECCCCHHHHHHHHHhcccCCEEEEEc
Q 017916          245 EKIQKAMGTGIDVSF-DCAGFNKTMSTALSATRAGGKVCLVG  285 (364)
Q Consensus       245 ~~~~~~~~~~~d~vi-d~~g~~~~~~~~~~~l~~~G~~v~~g  285 (364)
                        . ......+|.|| |--...+.+..+.+.|+|+|+++.+.
T Consensus       162 --~-~~~~~~fDaV~ldlp~P~~~l~~~~~~LkpGG~lv~~~  200 (264)
T d1i9ga_         162 --S-ELPDGSVDRAVLDMLAPWEVLDAVSRLLVAGGVLMVYV  200 (264)
T ss_dssp             --C-CCCTTCEEEEEEESSCGGGGHHHHHHHEEEEEEEEEEE
T ss_pred             --c-cccCCCcceEEEecCCHHHHHHHHHhccCCCCEEEEEe
Confidence              0 00135689766 54443567889999999999999874

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=97.12  E-value=0.0056  Score=50.67  Aligned_cols=103  Identities=17%  Similarity=0.326  Sum_probs=68.1

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHH-----HHHHcCCCe-EEecC-CCcccHHHHHHHHHHHcC
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLS-----VAKELGADN-IVKVS-TNLQDIAEEVEKIQKAMG  252 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~-----~~~~lg~~~-~~~~~-~~~~~~~~~i~~~~~~~~  252 (364)
                      +|.++||+|+ +++|.+.++.+...|+ .|+.++++.++.+     +.++.|... .+..| ...+++.+.++...+.. 
T Consensus         4 ~gK~~lITGas~GIG~aia~~la~~Ga-~V~i~~r~~~~~~~~~~~l~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~-   81 (251)
T d1vl8a_           4 RGRVALVTGGSRGLGFGIAQGLAEAGC-SVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEKF-   81 (251)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHHhCCcEEEEEccCCCHHHHHHHHHHHHHHc-
Confidence            4789999998 9999999999999999 6777877776543     234456542 22222 22344444455444433 


Q ss_pred             CCccEEEECCCCH-------------------------HHHHHHHHhcc--cCCEEEEEc
Q 017916          253 TGIDVSFDCAGFN-------------------------KTMSTALSATR--AGGKVCLVG  285 (364)
Q Consensus       253 ~~~d~vid~~g~~-------------------------~~~~~~~~~l~--~~G~~v~~g  285 (364)
                      +++|++|+++|..                         ...+.++..|.  .+|+++.++
T Consensus        82 g~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~i~  141 (251)
T d1vl8a_          82 GKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIG  141 (251)
T ss_dssp             SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEEC
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccccccccccc
Confidence            4799999998742                         24455666774  457888886

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

Probab=97.11  E-value=0.0021  Score=53.58  Aligned_cols=83  Identities=16%  Similarity=0.219  Sum_probs=57.0

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHH----HHHcCCCe-EEecCCC-cccHHHHHHHHHHHcCC
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSV----AKELGADN-IVKVSTN-LQDIAEEVEKIQKAMGT  253 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~----~~~lg~~~-~~~~~~~-~~~~~~~i~~~~~~~~~  253 (364)
                      +|.++||+|+ +++|.+.++.+...|+ .|+.+++++++.+.    +++.+... .+..|-. .++..+.++.+.+..++
T Consensus         5 ~gK~alITGas~GIG~aia~~la~~G~-~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~g   83 (258)
T d1ae1a_           5 KGTTALVTGGSKGIGYAIVEELAGLGA-RVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVFDG   83 (258)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTTS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCceEEEeecCCHHHHHHHHHHHHHHhCC
Confidence            6899999997 9999999999999999 67888888766443    34445433 2223322 23444444555444456


Q ss_pred             CccEEEECCCC
Q 017916          254 GIDVSFDCAGF  264 (364)
Q Consensus       254 ~~d~vid~~g~  264 (364)
                      .+|++++++|.
T Consensus        84 ~idilinnag~   94 (258)
T d1ae1a_          84 KLNILVNNAGV   94 (258)
T ss_dssp             CCCEEEECCCC
T ss_pred             CcEEEeccccc
Confidence            79999998874

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.05  E-value=0.0024  Score=52.97  Aligned_cols=81  Identities=23%  Similarity=0.277  Sum_probs=56.6

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHH-HcCCCeEEecC-CCcccHHHHHHHHHHHcCCCccE
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAK-ELGADNIVKVS-TNLQDIAEEVEKIQKAMGTGIDV  257 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~-~lg~~~~~~~~-~~~~~~~~~i~~~~~~~~~~~d~  257 (364)
                      +|.++||+|+ +++|.+.++.+...|+ .|+.+++++++.+.+. +++-...+..| ...++..+.+++..+.. +++|+
T Consensus         5 ~GK~alITGas~GIG~aia~~la~~Ga-~V~i~~r~~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~~~-g~iDi   82 (250)
T d1ydea1           5 AGKVVVVTGGGRGIGAGIVRAFVNSGA-RVVICDKDESGGRALEQELPGAVFILCDVTQEDDVKTLVSETIRRF-GRLDC   82 (250)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHH-SCCCE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHhcCCCeEEEccCCCHHHHHHHHHHHHHhc-CCCCE
Confidence            5899999998 9999999999999999 6778888888776554 44432333222 22344444444444433 47999


Q ss_pred             EEECCC
Q 017916          258 SFDCAG  263 (364)
Q Consensus       258 vid~~g  263 (364)
                      +|+++|
T Consensus        83 lVnnAG   88 (250)
T d1ydea1          83 VVNNAG   88 (250)
T ss_dssp             EEECCC
T ss_pred             EEeccc
Confidence            999887

>d1r18a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=97.03  E-value=0.00021  Score=58.42  Aligned_cols=104  Identities=19%  Similarity=0.221  Sum_probs=63.9

Q ss_pred             HHHHHc--CCCCCCEEEEEcCCHHHHHHHHHHHH---CCC---CEEEEEecChhHHHHHHH---------cCCCeEEecC
Q 017916          172 HACRRA--NIGPETNVLIMGAGPIGLVTMLGARA---FGA---PRIVIVDVDDYRLSVAKE---------LGADNIVKVS  234 (364)
Q Consensus       172 ~~l~~~--~~~~g~~VLI~Gag~~G~~ai~la~~---~g~---~~vv~~~~~~~~~~~~~~---------lg~~~~~~~~  234 (364)
                      .+++..  .+++|++||..|+|. |..++.+++.   .|.   ..|++++..++-.+.+++         ++...+....
T Consensus        69 ~~l~~L~~~l~~g~~VLeIGtGs-GY~ta~la~l~g~~g~~~~~~V~~iE~~~~l~~~a~~~l~~~~~~~~~~~nv~~~~  147 (223)
T d1r18a_          69 FALEYLRDHLKPGARILDVGSGS-GYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVE  147 (223)
T ss_dssp             HHHHHTTTTCCTTCEEEEESCTT-SHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEE
T ss_pred             HHHHHHhhccCCCCeEEEecCCC-CHHHHHHHHHhhhccCCcccEEEEEecCHHHHHHHHHhhhhcchhhcCccEEEEEe
Confidence            345543  789999999998644 5555555554   443   268999988765555432         2222222111


Q ss_pred             CCcccHHHHHHHHHHHcCCCccEEEECCCCHHHHHHHHHhcccCCEEEEE
Q 017916          235 TNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLV  284 (364)
Q Consensus       235 ~~~~~~~~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~  284 (364)
                      .   |..+.   +.  ...+||.|+-+.+..+....+++.|++||+++..
T Consensus       148 ~---d~~~~---~~--~~~~fD~Iiv~~a~~~~p~~l~~~Lk~gG~lV~p  189 (223)
T d1r18a_         148 G---DGRKG---YP--PNAPYNAIHVGAAAPDTPTELINQLASGGRLIVP  189 (223)
T ss_dssp             S---CGGGC---CG--GGCSEEEEEECSCBSSCCHHHHHTEEEEEEEEEE
T ss_pred             c---ccccc---cc--cccceeeEEEEeechhchHHHHHhcCCCcEEEEE
Confidence            1   11000   00  1357999988777665667789999999999874

>d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Siroheme synthase CysG, domain 1
species: Salmonella typhimurium [TaxId: 90371]

Probab=96.95  E-value=0.01  Score=42.33  Aligned_cols=91  Identities=13%  Similarity=0.019  Sum_probs=61.0

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecCh--hHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcCCCccEE
Q 017916          181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDD--YRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVS  258 (364)
Q Consensus       181 ~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~--~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~v  258 (364)
                      .|.+|||.|+|.+|..-++.+...|++ +.+++...  +-..+++.-+.. .+.-.....+            -.+++++
T Consensus        11 ~~k~vlVvG~G~va~~ka~~ll~~ga~-v~v~~~~~~~~~~~~~~~~~i~-~~~~~~~~~d------------l~~~~lv   76 (113)
T d1pjqa1          11 RDRDCLIVGGGDVAERKARLLLEAGAR-LTVNALTFIPQFTVWANEGMLT-LVEGPFDETL------------LDSCWLA   76 (113)
T ss_dssp             BTCEEEEECCSHHHHHHHHHHHHTTBE-EEEEESSCCHHHHHHHTTTSCE-EEESSCCGGG------------GTTCSEE
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCCe-EEEEeccCChHHHHHHhcCCce-eeccCCCHHH------------hCCCcEE
Confidence            478999999999999999999999995 55554432  223333332222 2221111122            1468999


Q ss_pred             EECCCCHHHHHHHHHhcccCCEEEEEc
Q 017916          259 FDCAGFNKTMSTALSATRAGGKVCLVG  285 (364)
Q Consensus       259 id~~g~~~~~~~~~~~l~~~G~~v~~g  285 (364)
                      +.+.+..+.-....+..++.|.++...
T Consensus        77 ~~at~d~~~n~~i~~~a~~~~ilVNv~  103 (113)
T d1pjqa1          77 IAATDDDTVNQRVSDAAESRRIFCNVV  103 (113)
T ss_dssp             EECCSCHHHHHHHHHHHHHTTCEEEET
T ss_pred             eecCCCHHHHHHHHHHHHHcCCEEEeC
Confidence            999997766667888888899888764

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=96.94  E-value=0.0034  Score=52.31  Aligned_cols=105  Identities=20%  Similarity=0.265  Sum_probs=69.7

Q ss_pred             CCCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHH----HHHHcCCCe-EEecCC-CcccHHHHHHHHHHHcC
Q 017916          180 GPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLS----VAKELGADN-IVKVST-NLQDIAEEVEKIQKAMG  252 (364)
Q Consensus       180 ~~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~----~~~~lg~~~-~~~~~~-~~~~~~~~i~~~~~~~~  252 (364)
                      -.|+++||+|+ +++|.+.++.+...|+++++...++++..+    .+++.|... .+..|- ..++..+.++...+.. 
T Consensus         4 L~GK~alITGas~GIG~aia~~la~~G~~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~-   82 (259)
T d1ja9a_           4 LAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSHF-   82 (259)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH-
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHHcCCCceEecCCCCCHHHHHHHHHHHHHHc-
Confidence            46899999998 999999999999999965544555555433    334556543 222332 2344445555554443 


Q ss_pred             CCccEEEECCCCH-------------------------HHHHHHHHhcccCCEEEEEc
Q 017916          253 TGIDVSFDCAGFN-------------------------KTMSTALSATRAGGKVCLVG  285 (364)
Q Consensus       253 ~~~d~vid~~g~~-------------------------~~~~~~~~~l~~~G~~v~~g  285 (364)
                      +++|++++++|..                         ...+.++..|+.+|.++.+.
T Consensus        83 g~idilinnag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~~iii~  140 (259)
T d1ja9a_          83 GGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRGGRIILTS  140 (259)
T ss_dssp             SCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEEEEEEEEC
T ss_pred             CCCcEEEeccccccccccccchHHHHHHHHhhccceeeeehhhhhhhhhcCCcccccc
Confidence            4699999998742                         25556777888888877765

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.94  E-value=0.0015  Score=54.06  Aligned_cols=79  Identities=18%  Similarity=0.336  Sum_probs=54.3

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcCCCccEEE
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF  259 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vi  259 (364)
                      +|.++||+|+ +++|.+.++.+...|+ .|+.+++++++.+.+.+.........+...++   .+...... -.++|+++
T Consensus         5 ~gK~alITGas~GIG~aia~~la~~G~-~Vi~~~r~~~~l~~~~~~~~~~~~~~d~~~~~---~~~~~~~~-~~~id~lV   79 (245)
T d2ag5a1           5 DGKVIILTAAAQGIGQAAALAFAREGA-KVIATDINESKLQELEKYPGIQTRVLDVTKKK---QIDQFANE-VERLDVLF   79 (245)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHGGGGGSTTEEEEECCTTCHH---HHHHHHHH-CSCCSEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhccCCceeeeeccccc---cccccccc-cccceeEE
Confidence            5789999998 9999999999999999 67888888877665554332233333332233   33333332 35799999


Q ss_pred             ECCCC
Q 017916          260 DCAGF  264 (364)
Q Consensus       260 d~~g~  264 (364)
                      ++.|.
T Consensus        80 n~ag~   84 (245)
T d2ag5a1          80 NVAGF   84 (245)
T ss_dssp             ECCCC
T ss_pred             ecccc
Confidence            99874

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

Probab=96.93  E-value=0.0026  Score=53.10  Aligned_cols=83  Identities=13%  Similarity=0.187  Sum_probs=55.5

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHH-HH---cCCCe-EEecCC-CcccHHHHHHHHHHHcCC
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KE---LGADN-IVKVST-NLQDIAEEVEKIQKAMGT  253 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~-~~---lg~~~-~~~~~~-~~~~~~~~i~~~~~~~~~  253 (364)
                      +|.++||+|+ +++|.+.++.+...|+ .|+.+++++++.+.+ ++   .+... .+..|- ..++..+.++......+.
T Consensus         7 ~GK~alITGas~GIG~aia~~la~~Ga-~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~   85 (259)
T d2ae2a_           7 EGCTALVTGGSRGIGYGIVEELASLGA-SVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHFHG   85 (259)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHTTT
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCceEEEeeCCCHHHHHHHHHHHHHHhCC
Confidence            6889999998 9999999999999999 577788887765433 23   34322 222222 223444444444444455


Q ss_pred             CccEEEECCCC
Q 017916          254 GIDVSFDCAGF  264 (364)
Q Consensus       254 ~~d~vid~~g~  264 (364)
                      ++|++++++|.
T Consensus        86 ~idilvnnAG~   96 (259)
T d2ae2a_          86 KLNILVNNAGI   96 (259)
T ss_dssp             CCCEEEECCCC
T ss_pred             CceEEEECCce
Confidence            79999999874

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.92  E-value=0.0035  Score=52.72  Aligned_cols=102  Identities=26%  Similarity=0.385  Sum_probs=63.1

Q ss_pred             CCEE-EEEcC-CHHHHHHHH-HHHHCCCCEEEEEecChhHHHHH-HHc---CCC-eEEecCC-CcccHHHHHHHHHHHcC
Q 017916          182 ETNV-LIMGA-GPIGLVTML-GARAFGAPRIVIVDVDDYRLSVA-KEL---GAD-NIVKVST-NLQDIAEEVEKIQKAMG  252 (364)
Q Consensus       182 g~~V-LI~Ga-g~~G~~ai~-la~~~g~~~vv~~~~~~~~~~~~-~~l---g~~-~~~~~~~-~~~~~~~~i~~~~~~~~  252 (364)
                      |.+| ||+|+ +++|.+.++ |++.-|+ .|+.+.++.++.+.+ +++   +.. ..+..|- ..++..+....+.+.. 
T Consensus         2 g~rVAlVTGas~GIG~a~A~~la~~~g~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dvs~~~sv~~~~~~~~~~~-   79 (275)
T d1wmaa1           2 GIHVALVTGGNKGIGLAIVRDLCRLFSG-DVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEY-   79 (275)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHHSSS-EEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred             CCeEEEECCCCCHHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEEecCCHHHHHHHHHHHHHhc-
Confidence            6677 77888 999988776 5566688 677777887775433 333   432 2222222 2233333334443333 


Q ss_pred             CCccEEEECCCCH-------------------------HHHHHHHHhcccCCEEEEEc
Q 017916          253 TGIDVSFDCAGFN-------------------------KTMSTALSATRAGGKVCLVG  285 (364)
Q Consensus       253 ~~~d~vid~~g~~-------------------------~~~~~~~~~l~~~G~~v~~g  285 (364)
                      +++|++|+++|..                         ...+.++..|++.|+++.++
T Consensus        80 g~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~g~ivnis  137 (275)
T d1wmaa1          80 GGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVS  137 (275)
T ss_dssp             SSEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEC
T ss_pred             CCcEEEEEcCCcCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccc
Confidence            4799999998841                         13445566778889998875

>d2b25a1 c.66.1.13 (A:6-329) Hypothetical protein FLJ20628 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Hypothetical protein FLJ20628
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.92  E-value=0.0013  Score=56.65  Aligned_cols=106  Identities=21%  Similarity=0.319  Sum_probs=68.2

Q ss_pred             HHHHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCC-EEEEEecChhHHHHHHH----cC-----------CCeEEecCCC
Q 017916          173 ACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAP-RIVIVDVDDYRLSVAKE----LG-----------ADNIVKVSTN  236 (364)
Q Consensus       173 ~l~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~-~vv~~~~~~~~~~~~~~----lg-----------~~~~~~~~~~  236 (364)
                      .+...+++||++||=.|+|. |.+++.+|++.|.+ .|++++.+++..+.+++    ++           .+.+......
T Consensus        90 Il~~l~i~pG~rVLE~GtGs-G~lt~~LAr~vg~~G~V~t~E~~~~~~~~A~~n~~~~~~~~~~~~~~~~~~nv~~~~~d  168 (324)
T d2b25a1          90 ILSMMDINPGDTVLEAGSGS-GGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHKD  168 (324)
T ss_dssp             HHHHHTCCTTCEEEEECCTT-SHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEESC
T ss_pred             HHHHhCCCCCCEEEEecccc-cHHHHHHHHHhCCCcEEEEecCCHHHHHHHHHHHHHhhhhhhhhhhhccccceeEEecc
Confidence            35678999999999998766 88899999998754 79999999988776653    11           1111111111


Q ss_pred             cccHHHHHHHHHHHcCCCccEEE-ECCCCHHHHHHHHHhcccCCEEEEEc
Q 017916          237 LQDIAEEVEKIQKAMGTGIDVSF-DCAGFNKTMSTALSATRAGGKVCLVG  285 (364)
Q Consensus       237 ~~~~~~~i~~~~~~~~~~~d~vi-d~~g~~~~~~~~~~~l~~~G~~v~~g  285 (364)
                      -.++...   +   ....+|.|| |--...+.+.++.+.|+|||+++.+.
T Consensus       169 i~~~~~~---~---~~~~fD~V~LD~p~P~~~l~~~~~~LKpGG~lv~~~  212 (324)
T d2b25a1         169 ISGATED---I---KSLTFDAVALDMLNPHVTLPVFYPHLKHGGVCAVYV  212 (324)
T ss_dssp             TTCCC-------------EEEEEECSSSTTTTHHHHGGGEEEEEEEEEEE
T ss_pred             hhhcccc---c---CCCCcceEeecCcCHHHHHHHHHHhccCCCEEEEEe
Confidence            1111111   1   124688876 43222357889999999999999875

>d1kpga_ c.66.1.18 (A:) CmaA1 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: CmaA1
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=96.91  E-value=0.0041  Score=52.50  Aligned_cols=100  Identities=15%  Similarity=0.156  Sum_probs=68.8

Q ss_pred             HHHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHH----cCCCeEEecCCCcccHHHHHHHHHH
Q 017916          174 CRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKE----LGADNIVKVSTNLQDIAEEVEKIQK  249 (364)
Q Consensus       174 l~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~i~~~~~  249 (364)
                      ++++++++|++||=.|+|- |..++.+|+..|+ .|.+++.+++..+.+++    .|...-+.+..  .|+.        
T Consensus        55 ~~~l~l~~G~~VLDiGCG~-G~~a~~~a~~~g~-~v~git~s~~Q~~~a~~~~~~~g~~~~v~~~~--~d~~--------  122 (285)
T d1kpga_          55 LGKLGLQPGMTLLDVGCGW-GATMMRAVEKYDV-NVVGLTLSKNQANHVQQLVANSENLRSKRVLL--AGWE--------  122 (285)
T ss_dssp             HTTTTCCTTCEEEEETCTT-SHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHTCCCCSCEEEEE--SCGG--------
T ss_pred             HHHcCCCCCCEEEEecCcc-hHHHHHHHhcCCc-ceEEEeccHHHHHHHHHHHHhhhhhhhhHHHH--hhhh--------
Confidence            3678999999999999755 6788899999998 78999999987777654    33221111111  1111        


Q ss_pred             HcCCCccEEEE-----CCCC---HHHHHHHHHhcccCCEEEEEc
Q 017916          250 AMGTGIDVSFD-----CAGF---NKTMSTALSATRAGGKVCLVG  285 (364)
Q Consensus       250 ~~~~~~d~vid-----~~g~---~~~~~~~~~~l~~~G~~v~~g  285 (364)
                      ...+.+|.++.     .++.   ...+..+.++|+|+|+++...
T Consensus       123 ~~~~~fD~i~si~~~eh~~~~~~~~~~~~~~r~LkpgG~~~l~~  166 (285)
T d1kpga_         123 QFDEPVDRIVSIGAFEHFGHERYDAFFSLAHRLLPADGVMLLHT  166 (285)
T ss_dssp             GCCCCCSEEEEESCGGGTCTTTHHHHHHHHHHHSCTTCEEEEEE
T ss_pred             cccccccceeeehhhhhcCchhHHHHHHHHHhhcCCCCcEEEEE
Confidence            11457888764     3443   357788999999999998643

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=96.90  E-value=0.002  Score=53.83  Aligned_cols=83  Identities=18%  Similarity=0.252  Sum_probs=55.6

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHH-HH---cCCCe-EEecCC-CcccHHHHHHHHHHHcCC
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KE---LGADN-IVKVST-NLQDIAEEVEKIQKAMGT  253 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~-~~---lg~~~-~~~~~~-~~~~~~~~i~~~~~~~~~  253 (364)
                      +|.++||+|+ +++|.+.++.+...|+ .|+.+++++++.+.+ ++   .+... .+..|- ..++..+.++...+..++
T Consensus         7 kgK~alVTGas~GIG~aiA~~la~~Ga-~V~~~~r~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~g   85 (259)
T d1xq1a_           7 KAKTVLVTGGTKGIGHAIVEEFAGFGA-VIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMFGG   85 (259)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHTT
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHHHhCC
Confidence            5889999998 9999999999999999 677788887765433 22   23221 222222 223444445444444456


Q ss_pred             CccEEEECCCC
Q 017916          254 GIDVSFDCAGF  264 (364)
Q Consensus       254 ~~d~vid~~g~  264 (364)
                      .+|++++++|.
T Consensus        86 ~idilvnnAG~   96 (259)
T d1xq1a_          86 KLDILINNLGA   96 (259)
T ss_dssp             CCSEEEEECCC
T ss_pred             Ccccccccccc
Confidence            79999999885

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

Probab=96.89  E-value=0.0027  Score=50.27  Aligned_cols=76  Identities=13%  Similarity=0.230  Sum_probs=51.8

Q ss_pred             CCCCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHH-Hc----CCC-eEEecCCCcccHHHHHHHHHHHc
Q 017916          179 IGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAK-EL----GAD-NIVKVSTNLQDIAEEVEKIQKAM  251 (364)
Q Consensus       179 ~~~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~-~l----g~~-~~~~~~~~~~~~~~~i~~~~~~~  251 (364)
                      --+|.+|||+|+ |++|..+++.+...|+ .|+.+.++.++.+.+. ++    ... ...+..    + .+.++++    
T Consensus        20 ~l~gK~vlItGasgGIG~~ia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~----~-~~~~~~~----   89 (191)
T d1luaa1          20 SVKGKKAVVLAGTGPVGMRSAALLAGEGA-EVVLCGRKLDKAQAAADSVNKRFKVNVTAAETA----D-DASRAEA----   89 (191)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHHHTCCCEEEECC----S-HHHHHHH----
T ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHhhcc-chhhcccchHHHHHHHHHHHhccchhhhhhhcc----c-HHHHHHH----
Confidence            347899999998 9999999999999999 6777888887765443 22    222 222321    1 1233333    


Q ss_pred             CCCccEEEECCCC
Q 017916          252 GTGIDVSFDCAGF  264 (364)
Q Consensus       252 ~~~~d~vid~~g~  264 (364)
                      -+++|++|++.|.
T Consensus        90 ~~~iDilin~Ag~  102 (191)
T d1luaa1          90 VKGAHFVFTAGAI  102 (191)
T ss_dssp             TTTCSEEEECCCT
T ss_pred             hcCcCeeeecCcc
Confidence            2579999999873

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.87  E-value=0.0038  Score=51.45  Aligned_cols=79  Identities=27%  Similarity=0.246  Sum_probs=56.2

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHH-HHcCCCeEEecCCCcccHHHHHHHHHHHcCCCccEE
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVS  258 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~-~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~v  258 (364)
                      .|.++||+|+ +++|.+.++.+...|+ .|+.+++++++.+.+ ++++....+..|-.++   +.++++.+.. +++|++
T Consensus         6 ~GK~~lITGas~GIG~aia~~la~~G~-~V~~~~r~~~~l~~~~~~~~~~~~~~~Dv~d~---~~v~~~~~~~-g~iDil   80 (244)
T d1pr9a_           6 AGRRVLVTGAGKGIGRGTVQALHATGA-RVVAVSRTQADLDSLVRECPGIEPVCVDLGDW---EATERALGSV-GPVDLL   80 (244)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHSTTCEEEECCTTCH---HHHHHHHTTC-CCCCEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEECCHHHHHHHHHhcCCCeEEEEeCCCH---HHHHHHHHHh-CCceEE
Confidence            6899999998 9999999999999999 678888888776544 5565443333332222   3355554433 479999


Q ss_pred             EECCCC
Q 017916          259 FDCAGF  264 (364)
Q Consensus       259 id~~g~  264 (364)
                      ++++|.
T Consensus        81 VnnAg~   86 (244)
T d1pr9a_          81 VNNAAV   86 (244)
T ss_dssp             EECCCC
T ss_pred             Eecccc
Confidence            998874

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

Probab=96.81  E-value=0.0056  Score=51.87  Aligned_cols=82  Identities=13%  Similarity=0.144  Sum_probs=53.6

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHH-----HHHHcCCCe-EEecCCCc-ccHHHHHHHHHHHcC
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLS-----VAKELGADN-IVKVSTNL-QDIAEEVEKIQKAMG  252 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~-----~~~~lg~~~-~~~~~~~~-~~~~~~i~~~~~~~~  252 (364)
                      +|.++||+|+ +++|.+.++.+...|+ .|+.++++.++.+     +.++.|... .+..+-.+ ++..+.+... ....
T Consensus        24 ~gK~alITGas~GIG~aiA~~la~~Ga-~Vii~~r~~~~l~~~~~~l~~~~g~~~~~~~~D~~~~~~v~~~~~~~-~~~~  101 (294)
T d1w6ua_          24 QGKVAFITGGGTGLGKGMTTLLSSLGA-QCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSEL-IKVA  101 (294)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHH-HHHT
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHHhcCCceEEEEecccChHHHHHHhhhh-hhhc
Confidence            5799999997 9999999999999999 6778888876543     223344332 33333222 2222233333 2335


Q ss_pred             CCccEEEECCCC
Q 017916          253 TGIDVSFDCAGF  264 (364)
Q Consensus       253 ~~~d~vid~~g~  264 (364)
                      +++|++++++|.
T Consensus       102 g~iDilvnnAg~  113 (294)
T d1w6ua_         102 GHPNIVINNAAG  113 (294)
T ss_dssp             CSCSEEEECCCC
T ss_pred             cccchhhhhhhh
Confidence            689999999874

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=96.79  E-value=0.01  Score=50.44  Aligned_cols=102  Identities=21%  Similarity=0.272  Sum_probs=65.2

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecC---------hhHH-HHHH---HcCCCeEEecCCCcccHHHHHHH
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVD---------DYRL-SVAK---ELGADNIVKVSTNLQDIAEEVEK  246 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~---------~~~~-~~~~---~lg~~~~~~~~~~~~~~~~~i~~  246 (364)
                      +|.++||+|+ +++|.+.++.+...|+ .|+.++.+         .++. +..+   ..+.....++.+ .++..+.++.
T Consensus         6 ~gKvalITGas~GIG~aiA~~la~~Ga-~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~-~~~~~~~v~~   83 (302)
T d1gz6a_           6 DGRVVLVTGAGGGLGRAYALAFAERGA-LVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYDS-VEAGEKLVKT   83 (302)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEEEEECCC-GGGHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEeCCchhhhhhhhHHHHHHHHHHHhhcccccccccch-HHHHHHHHHH
Confidence            5889999998 9999999999999999 56666432         2222 2222   334444444432 3455555555


Q ss_pred             HHHHcCCCccEEEECCCCH-------------------------HHHHHHHHhcc--cCCEEEEEc
Q 017916          247 IQKAMGTGIDVSFDCAGFN-------------------------KTMSTALSATR--AGGKVCLVG  285 (364)
Q Consensus       247 ~~~~~~~~~d~vid~~g~~-------------------------~~~~~~~~~l~--~~G~~v~~g  285 (364)
                      ..+. -+++|++|+++|..                         ...+.++..|.  .+|+++.++
T Consensus        84 ~~~~-~G~iDiLVnNAGi~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IV~is  148 (302)
T d1gz6a_          84 ALDT-FGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTA  148 (302)
T ss_dssp             HHHH-TSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEEC
T ss_pred             HHHH-cCCCCEEEECCccCCCCChhhCCHHHHhhhhceeehhhHHHHHHhHHHHHhCCCcEEEEeC
Confidence            5443 35799999998842                         13445555663  458999886

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.78  E-value=0.0084  Score=49.31  Aligned_cols=82  Identities=26%  Similarity=0.349  Sum_probs=55.9

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHH----HHcCCC-eEEecCCC-cccHHHHHHHHHHHcCC
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA----KELGAD-NIVKVSTN-LQDIAEEVEKIQKAMGT  253 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~----~~lg~~-~~~~~~~~-~~~~~~~i~~~~~~~~~  253 (364)
                      .|.++||+|+ +++|.+.+......|+ .|+.++++.++.+.+    +..|.. ..+..|-. .++..+.++...+. -+
T Consensus         6 ~Gkv~lITGas~GIG~~ia~~la~~G~-~V~l~~r~~~~l~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~-~g   83 (244)
T d1yb1a_           6 TGEIVLITGAGHGIGRLTAYEFAKLKS-KLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAE-IG   83 (244)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH-TC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHH-cC
Confidence            5899999998 9999999999999999 577788888776533    344543 22233322 23444445444443 35


Q ss_pred             CccEEEECCCC
Q 017916          254 GIDVSFDCAGF  264 (364)
Q Consensus       254 ~~d~vid~~g~  264 (364)
                      .+|++|+++|.
T Consensus        84 ~idilinnag~   94 (244)
T d1yb1a_          84 DVSILVNNAGV   94 (244)
T ss_dssp             CCSEEEECCCC
T ss_pred             CCceeEeeccc
Confidence            79999999885

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

Probab=96.78  E-value=0.0043  Score=51.69  Aligned_cols=82  Identities=28%  Similarity=0.435  Sum_probs=55.8

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHH----HHcCCCe-EEecC-CCcccHHHHHHHHHHHcCC
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA----KELGADN-IVKVS-TNLQDIAEEVEKIQKAMGT  253 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~----~~lg~~~-~~~~~-~~~~~~~~~i~~~~~~~~~  253 (364)
                      +|.++||+|+ +++|.+.+..+...|+ .|+.+++++++.+.+    ++.|... .+..| ...+++.+.++...+.. +
T Consensus         4 ~gK~alITGas~GIG~aia~~la~~Ga-~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~-g   81 (260)
T d1zema1           4 NGKVCLVTGAGGNIGLATALRLAEEGT-AIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDF-G   81 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHH-S
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHh-C
Confidence            5889999998 9999999999999999 678888888776543    3344432 22222 22344455555544433 4


Q ss_pred             CccEEEECCCC
Q 017916          254 GIDVSFDCAGF  264 (364)
Q Consensus       254 ~~d~vid~~g~  264 (364)
                      ++|++|+++|.
T Consensus        82 ~iDilVnnaG~   92 (260)
T d1zema1          82 KIDFLFNNAGY   92 (260)
T ss_dssp             CCCEEEECCCC
T ss_pred             CCCeehhhhcc
Confidence            79999998873

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=96.77  E-value=0.0035  Score=51.37  Aligned_cols=100  Identities=23%  Similarity=0.294  Sum_probs=60.3

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHH-HHHHHHH-cCCCccE
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEE-VEKIQKA-MGTGIDV  257 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~-i~~~~~~-~~~~~d~  257 (364)
                      +|.+|||+|+ +++|.+.++.....|+ .|+.++..+.+..     ........+....+..+. ....... ...++|+
T Consensus         1 egK~vlITGas~GIG~a~a~~l~~~G~-~V~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iD~   74 (236)
T d1dhra_           1 EARRVLVYGGRGALGSRCVQAFRARNW-WVASIDVVENEEA-----SASVIVKMTDSFTEQADQVTAEVGKLLGDQKVDA   74 (236)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHTTTC-EEEEEESSCCTTS-----SEEEECCCCSCHHHHHHHHHHHHHHHHTTCCEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCccccc-----cccceeecccCcHHHHHHHHHHHHHHhCCCCceE
Confidence            4789999998 9999999999999999 5677765443311     111111111111111111 2222222 2347999


Q ss_pred             EEECCCCH--------------------------HHHHHHHHhcccCCEEEEEcC
Q 017916          258 SFDCAGFN--------------------------KTMSTALSATRAGGKVCLVGM  286 (364)
Q Consensus       258 vid~~g~~--------------------------~~~~~~~~~l~~~G~~v~~g~  286 (364)
                      +|+++|..                          ...+.++..|+++|+++.++.
T Consensus        75 lInnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~G~Iv~isS  129 (236)
T d1dhra_          75 ILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGA  129 (236)
T ss_dssp             EEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECC
T ss_pred             EEECCcccccccchhcCCHHHHHHHHHHcchHHHHHHHHHHHhcccccceeEEcc
Confidence            99988731                          133446667788999998863

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

Probab=96.77  E-value=0.0019  Score=53.70  Aligned_cols=103  Identities=21%  Similarity=0.239  Sum_probs=62.9

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHH---H-cCCCeE--EecCC--CcccHHHHHHHHHHHc
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAK---E-LGADNI--VKVST--NLQDIAEEVEKIQKAM  251 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~---~-lg~~~~--~~~~~--~~~~~~~~i~~~~~~~  251 (364)
                      +|.+|||+|+ +++|.+.+......|+++++.....+ +.+.+.   . .+-..+  +..+-  ...++.+.+....+..
T Consensus         4 ~gK~vlITGgs~GIG~~~A~~la~~G~~vii~~r~~~-~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~   82 (254)
T d1sbya1           4 TNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVE-NPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQL   82 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSC-CHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEECCcc-cHHHHHHHHhhCCCCCEEEEEeecCCCHHHHHHHHHHHHHHc
Confidence            5889999998 99999999999999997555554433 333222   2 222222  22222  2234445555555444


Q ss_pred             CCCccEEEECCCCH-----------------HHHHHHHHhcc-----cCCEEEEEc
Q 017916          252 GTGIDVSFDCAGFN-----------------KTMSTALSATR-----AGGKVCLVG  285 (364)
Q Consensus       252 ~~~~d~vid~~g~~-----------------~~~~~~~~~l~-----~~G~~v~~g  285 (364)
                       +++|++++++|..                 ...+.++..|.     ++|+++.++
T Consensus        83 -g~iDilvnnAG~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~~~g~Ii~is  137 (254)
T d1sbya1          83 -KTVDILINGAGILDDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANIC  137 (254)
T ss_dssp             -SCCCEEEECCCCCCTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEEC
T ss_pred             -CCCCEEEeCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcccCCCceEEEEe
Confidence             4799999999852                 13344555553     358888775

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=96.77  E-value=0.0047  Score=50.89  Aligned_cols=82  Identities=23%  Similarity=0.275  Sum_probs=56.7

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHH-HHcCCCe-EEecC-CCcccHHHHHHHHHHHcCCCcc
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KELGADN-IVKVS-TNLQDIAEEVEKIQKAMGTGID  256 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~-~~lg~~~-~~~~~-~~~~~~~~~i~~~~~~~~~~~d  256 (364)
                      +|.++||+|+ +++|.+.++.+...|+ .|+.+++++++.+.+ ++++-.. .+..| ...++..+.+++..+.. +++|
T Consensus         5 ~gK~alITGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-g~id   82 (244)
T d1nffa_           5 TGKVALVSGGARGMGASHVRAMVAEGA-KVVFGDILDEEGKAMAAELADAARYVHLDVTQPAQWKAAVDTAVTAF-GGLH   82 (244)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTGGGEEEEECCTTCHHHHHHHHHHHHHHH-SCCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhhCcceEEEeecCCHHHHHHHHHHHHHHh-CCCe
Confidence            5789999998 9999999999999999 578888888776544 5565322 22222 22344444555554433 4799


Q ss_pred             EEEECCCC
Q 017916          257 VSFDCAGF  264 (364)
Q Consensus       257 ~vid~~g~  264 (364)
                      ++++++|.
T Consensus        83 ilinnAG~   90 (244)
T d1nffa_          83 VLVNNAGI   90 (244)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCcc
Confidence            99999884

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

Probab=96.76  E-value=0.0054  Score=51.27  Aligned_cols=81  Identities=25%  Similarity=0.386  Sum_probs=55.7

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHH-HHcCCC---eEEecC-CCcccHHHHHHHHHHHcCCC
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KELGAD---NIVKVS-TNLQDIAEEVEKIQKAMGTG  254 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~-~~lg~~---~~~~~~-~~~~~~~~~i~~~~~~~~~~  254 (364)
                      +|.++||+|+ +++|.+.++.+...|+ .|+.+++++++.+.+ ++++..   ..+..| ...+++.+.++...+.. ++
T Consensus         5 ~gKvalITGas~GIG~aia~~la~~Ga-~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-g~   82 (268)
T d2bgka1           5 QDKVAIITGGAGGIGETTAKLFVRYGA-KVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAKH-GK   82 (268)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHH-SC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhcCCCceEEEEccCCCHHHHHHHHHHHHHHc-CC
Confidence            6889999998 9999999999999999 577888888776543 455432   222222 22344555555554433 47


Q ss_pred             ccEEEECCC
Q 017916          255 IDVSFDCAG  263 (364)
Q Consensus       255 ~d~vid~~g  263 (364)
                      +|++++++|
T Consensus        83 iD~lVnnAG   91 (268)
T d2bgka1          83 LDIMFGNVG   91 (268)
T ss_dssp             CCEEEECCC
T ss_pred             cceeccccc
Confidence            999999887

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

Probab=96.74  E-value=0.0045  Score=51.44  Aligned_cols=82  Identities=23%  Similarity=0.289  Sum_probs=57.3

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHH-HHHHcCCCeE-EecC-CCcccHHHHHHHHHHHcCCCcc
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLS-VAKELGADNI-VKVS-TNLQDIAEEVEKIQKAMGTGID  256 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~-~~~~lg~~~~-~~~~-~~~~~~~~~i~~~~~~~~~~~d  256 (364)
                      +|.++||+|+ +++|.+.++.+...|+ .|+.++++.++.+ ..++++.... +..| ...++..+.++...+.. +++|
T Consensus         4 ~gK~alVTGas~GIG~aia~~la~~Ga-~V~~~~r~~~~l~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~-g~iD   81 (256)
T d1k2wa_           4 DGKTALITGSARGIGRAFAEAYVREGA-RVAIADINLEAARATAAEIGPAACAIALDVTDQASIDRCVAELLDRW-GSID   81 (256)
T ss_dssp             TTEEEEEETCSSHHHHHHHHHHHHTTE-EEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHH-SCCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhCCceEEEEeeCCCHHHHHHHHHHHHHHh-CCcc
Confidence            5789999998 9999999999999999 5777888877655 4567775432 2222 22344444454444433 4799


Q ss_pred             EEEECCCC
Q 017916          257 VSFDCAGF  264 (364)
Q Consensus       257 ~vid~~g~  264 (364)
                      ++++++|.
T Consensus        82 ilVnnAg~   89 (256)
T d1k2wa_          82 ILVNNAAL   89 (256)
T ss_dssp             EEEECCCC
T ss_pred             EEEeeccc
Confidence            99999884

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=96.74  E-value=0.0046  Score=51.27  Aligned_cols=103  Identities=18%  Similarity=0.302  Sum_probs=69.8

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHH-HHHHcCCCeEE-ecCC-CcccHHHHHHHHHHHcCCCcc
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLS-VAKELGADNIV-KVST-NLQDIAEEVEKIQKAMGTGID  256 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~-~~~~lg~~~~~-~~~~-~~~~~~~~i~~~~~~~~~~~d  256 (364)
                      +|.++||+|+ +++|.+.++.+...|+ .|+.+++++++.+ +.++++..... ..+- ..++..+.++...+.. +++|
T Consensus         5 ~gK~alITGas~GIG~aia~~la~~Ga-~V~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~-g~iD   82 (253)
T d1hxha_           5 QGKVALVTGGASGVGLEVVKLLLGEGA-KVAFSDINEAAGQQLAAELGERSMFVRHDVSSEADWTLVMAAVQRRL-GTLN   82 (253)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHHHCTTEEEECCCTTCHHHHHHHHHHHHHHH-CSCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhCCCeEEEEeecCCHHHHHHHHHHHHHHh-CCCC
Confidence            5789999997 9999999999999999 5788888877765 44667754332 2222 2234444444443333 5799


Q ss_pred             EEEECCCCH-------------------------HHHHHHHHhcc-cCCEEEEEc
Q 017916          257 VSFDCAGFN-------------------------KTMSTALSATR-AGGKVCLVG  285 (364)
Q Consensus       257 ~vid~~g~~-------------------------~~~~~~~~~l~-~~G~~v~~g  285 (364)
                      ++++++|..                         ...+.++..|+ .+|+++.++
T Consensus        83 ilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~G~Iv~is  137 (253)
T d1hxha_          83 VLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETGGSIINMA  137 (253)
T ss_dssp             EEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTCEEEEEEC
T ss_pred             eEEecccccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCceeccc
Confidence            999998842                         13445556664 479999886

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.74  E-value=0.0057  Score=50.31  Aligned_cols=79  Identities=27%  Similarity=0.252  Sum_probs=54.9

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHH-HHHHcCCCeEEecCCCcccHHHHHHHHHHHcCCCccEE
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLS-VAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVS  258 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~-~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~v  258 (364)
                      +|.++||+|+ +++|.+.++.+...|+ .|+.+++++++.+ +.++++-...+..|-.++   +.+++..+.. +++|++
T Consensus         4 ~GK~alITGas~GIG~aia~~la~~Ga-~V~~~~r~~~~l~~~~~~~~~~~~~~~Dv~~~---~~v~~~~~~~-g~iDil   78 (242)
T d1cyda_           4 SGLRALVTGAGKGIGRDTVKALHASGA-KVVAVTRTNSDLVSLAKECPGIEPVCVDLGDW---DATEKALGGI-GPVDLL   78 (242)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHSTTCEEEECCTTCH---HHHHHHHTTC-CCCSEE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHhcCCCeEEEEeCCCH---HHHHHHHHHc-CCCeEE
Confidence            5899999998 9999999999999999 5777778877654 445565433333332222   2345554433 579999


Q ss_pred             EECCCC
Q 017916          259 FDCAGF  264 (364)
Q Consensus       259 id~~g~  264 (364)
                      ++++|.
T Consensus        79 VnnAg~   84 (242)
T d1cyda_          79 VNNAAL   84 (242)
T ss_dssp             EECCCC
T ss_pred             EECCcc
Confidence            999874

>d1nkva_ c.66.1.21 (A:) Hypothetical Protein YjhP {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Hypothetical Protein YjhP
domain: Hypothetical Protein YjhP
species: Escherichia coli [TaxId: 562]

Probab=96.72  E-value=0.001  Score=55.06  Aligned_cols=101  Identities=24%  Similarity=0.283  Sum_probs=69.0

Q ss_pred             HHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHH----cCCCeEEecCCCcccHHHHHHHHHHH
Q 017916          175 RRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKE----LGADNIVKVSTNLQDIAEEVEKIQKA  250 (364)
Q Consensus       175 ~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~i~~~~~~  250 (364)
                      +.++++||++||=.|+|. |..+..+++..|+ .+++++.+++-.+.+++    .|...-+.+..  .+..+    +  .
T Consensus        27 ~~~~l~pg~~VLDiGCG~-G~~~~~la~~~~~-~v~GvD~s~~~~~~ar~~~~~~gl~~~v~~~~--~d~~~----~--~   96 (245)
T d1nkva_          27 RVLRMKPGTRILDLGSGS-GEMLCTWARDHGI-TGTGIDMSSLFTAQAKRRAEELGVSERVHFIH--NDAAG----Y--V   96 (245)
T ss_dssp             HHTCCCTTCEEEEETCTT-CHHHHHHHHHTCC-EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEE--SCCTT----C--C
T ss_pred             HHcCCCCCCEEEEEcCCC-CHHHHHHHHhcCC-EEEEEecccchhhHHHHHHHHhhccccchhhh--hHHhh----c--c
Confidence            679999999999998754 5667788888898 78999999887766554    45432111111  11110    1  1


Q ss_pred             cCCCccEEEECC------CCHHHHHHHHHhcccCCEEEEEc
Q 017916          251 MGTGIDVSFDCA------GFNKTMSTALSATRAGGKVCLVG  285 (364)
Q Consensus       251 ~~~~~d~vid~~------g~~~~~~~~~~~l~~~G~~v~~g  285 (364)
                      ..+.+|+|+..-      .-...+.++.+.|+|||+++...
T Consensus        97 ~~~~fD~v~~~~~~~~~~d~~~~l~~~~r~LkPGG~l~i~~  137 (245)
T d1nkva_          97 ANEKCDVAACVGATWIAGGFAGAEELLAQSLKPGGIMLIGE  137 (245)
T ss_dssp             CSSCEEEEEEESCGGGTSSSHHHHHHHTTSEEEEEEEEEEE
T ss_pred             ccCceeEEEEEehhhccCCHHHHHHHHHHHcCcCcEEEEEe
Confidence            145799988531      22578888999999999998754

>d2fk8a1 c.66.1.18 (A:22-301) Methoxy mycolic acid synthase 4, Mma4 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: Methoxy mycolic acid synthase 4, Mma4
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=96.72  E-value=0.0046  Score=52.08  Aligned_cols=99  Identities=12%  Similarity=0.230  Sum_probs=67.2

Q ss_pred             HHHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHH----cCCCeEEecCCCcccHHHHHHHHHH
Q 017916          174 CRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKE----LGADNIVKVSTNLQDIAEEVEKIQK  249 (364)
Q Consensus       174 l~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~i~~~~~  249 (364)
                      ++..++++|++||=.|.|- |..+..+++..|+ .|++++.+++..+.+++    .|....+....  .+..        
T Consensus        45 ~~~l~l~~g~~VLDiGCG~-G~~a~~~a~~~g~-~v~gi~ls~~q~~~a~~~~~~~~l~~~~~~~~--~d~~--------  112 (280)
T d2fk8a1          45 LDKLDLKPGMTLLDIGCGW-GTTMRRAVERFDV-NVIGLTLSKNQHARCEQVLASIDTNRSRQVLL--QGWE--------  112 (280)
T ss_dssp             HTTSCCCTTCEEEEESCTT-SHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHTSCCSSCEEEEE--SCGG--------
T ss_pred             HHHcCCCCCCEEEEecCCc-hHHHHHHHHhCce-eEEEecchHHHHHHHHHHHHhhccccchhhhh--hhhh--------
Confidence            3668899999999999754 3456778888898 79999999988777654    34322111100  1111        


Q ss_pred             HcCCCccEEEE-----CCCC---HHHHHHHHHhcccCCEEEEE
Q 017916          250 AMGTGIDVSFD-----CAGF---NKTMSTALSATRAGGKVCLV  284 (364)
Q Consensus       250 ~~~~~~d~vid-----~~g~---~~~~~~~~~~l~~~G~~v~~  284 (364)
                      ...+.+|.|+.     .++.   ...++.+.++|+|+|+++.-
T Consensus       113 ~~~~~fD~i~si~~~eh~~~~~~~~~f~~i~~~LkpgG~~~i~  155 (280)
T d2fk8a1         113 DFAEPVDRIVSIEAFEHFGHENYDDFFKRCFNIMPADGRMTVQ  155 (280)
T ss_dssp             GCCCCCSEEEEESCGGGTCGGGHHHHHHHHHHHSCTTCEEEEE
T ss_pred             hhccchhhhhHhhHHHHhhhhhHHHHHHHHHhccCCCceEEEE
Confidence            11457888864     3342   35678899999999999864

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=96.72  E-value=0.013  Score=48.92  Aligned_cols=103  Identities=21%  Similarity=0.290  Sum_probs=68.7

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecC-hhHHH----HHHHcCCCeE-EecC-CCcccHHHHHHHHHHHcC
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVD-DYRLS----VAKELGADNI-VKVS-TNLQDIAEEVEKIQKAMG  252 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~-~~~~~----~~~~lg~~~~-~~~~-~~~~~~~~~i~~~~~~~~  252 (364)
                      +|.++||+|+ +++|.+.++.+...|++ |+.++.+ +++.+    .+++.+.+.. +..+ ...+++.+.++.+.+.. 
T Consensus        17 ~gK~~lITGas~GIG~aia~~la~~Ga~-Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~-   94 (272)
T d1g0oa_          17 EGKVALVTGAGRGIGREMAMELGRRGCK-VIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKIF-   94 (272)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCE-EEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCE-EEEEeCCchHHHHHHHHHHHhhCCceeeEeCCCCCHHHHHHHHHHHHHHh-
Confidence            4789999998 99999999999999995 5555544 44332    3345555432 2222 23355555565555444 


Q ss_pred             CCccEEEECCCCH-------------------------HHHHHHHHhcccCCEEEEEc
Q 017916          253 TGIDVSFDCAGFN-------------------------KTMSTALSATRAGGKVCLVG  285 (364)
Q Consensus       253 ~~~d~vid~~g~~-------------------------~~~~~~~~~l~~~G~~v~~g  285 (364)
                      +++|+++++.|..                         ...+.++..|...|+++.++
T Consensus        95 g~idilV~nag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~g~~i~i~  152 (272)
T d1g0oa_          95 GKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMG  152 (272)
T ss_dssp             SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEEC
T ss_pred             CCCCccccccccchhhhhhhhhhhHHHHHhhhccceeeeecccccccccccccccccc
Confidence            4799999988742                         24556777888888888775

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.67  E-value=0.0058  Score=50.77  Aligned_cols=82  Identities=22%  Similarity=0.319  Sum_probs=55.3

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHH----HHcCCC-eE--EecC-CCcccHHHHHHHHHHHc
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA----KELGAD-NI--VKVS-TNLQDIAEEVEKIQKAM  251 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~----~~lg~~-~~--~~~~-~~~~~~~~~i~~~~~~~  251 (364)
                      +|.++||+|+ +++|.+.+..+...|+ .|+.++++.++.+.+    ++.+.. .+  +..| ...++..+.+....+..
T Consensus         9 k~Kv~lITGas~GIG~aiA~~la~~G~-~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~v~~~~~~~   87 (257)
T d1xg5a_           9 RDRLALVTGASGGIGAAVARALVQQGL-KVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQH   87 (257)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCceEEEEEccCCCHHHHHHHHHHHHHhc
Confidence            4788999998 9999999999999999 577788887775543    233321 22  2222 23345555555554433


Q ss_pred             CCCccEEEECCCC
Q 017916          252 GTGIDVSFDCAGF  264 (364)
Q Consensus       252 ~~~~d~vid~~g~  264 (364)
                       +++|++|+++|.
T Consensus        88 -g~iD~lVnnAg~   99 (257)
T d1xg5a_          88 -SGVDICINNAGL   99 (257)
T ss_dssp             -CCCSEEEECCCC
T ss_pred             -CCCCEEEecccc
Confidence             579999999874

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

Probab=96.67  E-value=0.0024  Score=52.89  Aligned_cols=83  Identities=18%  Similarity=0.244  Sum_probs=54.2

Q ss_pred             CCEEEEEcC-CHHHHHHHHHHHHCCCC-EEEEEecChhHHHHHHHcCCC--eEEecCC-CcccHHHHHHHHHHHcC-CCc
Q 017916          182 ETNVLIMGA-GPIGLVTMLGARAFGAP-RIVIVDVDDYRLSVAKELGAD--NIVKVST-NLQDIAEEVEKIQKAMG-TGI  255 (364)
Q Consensus       182 g~~VLI~Ga-g~~G~~ai~la~~~g~~-~vv~~~~~~~~~~~~~~lg~~--~~~~~~~-~~~~~~~~i~~~~~~~~-~~~  255 (364)
                      ..+|||+|+ +++|.+.++.+...|+. .|+.+.++.++.+.+++....  .++..|- ..++..+..+.+.+..+ .++
T Consensus         3 ~KtilITGassGIG~a~a~~la~~G~~~~Vi~~~R~~~~~~~l~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~~~i   82 (250)
T d1yo6a1           3 PGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSRVHVLPLTVTCDKSLDTFVSKVGEIVGSDGL   82 (250)
T ss_dssp             CSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHTCCCTTEEEEECCTTCHHHHHHHHHHHHHHHGGGCC
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCCCEEEEEeCCHHHHHHHHHhhCCceEEEEEecCCHHHHHHHHHHHHHHhCCCCe
Confidence            378999998 99999999888888874 577777788887777664332  2232322 22333334444433323 369


Q ss_pred             cEEEECCCC
Q 017916          256 DVSFDCAGF  264 (364)
Q Consensus       256 d~vid~~g~  264 (364)
                      |++|+++|.
T Consensus        83 dilinnAG~   91 (250)
T d1yo6a1          83 SLLINNAGV   91 (250)
T ss_dssp             CEEEECCCC
T ss_pred             EEEEEcCcc
Confidence            999999884

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

Probab=96.66  E-value=0.006  Score=50.70  Aligned_cols=81  Identities=27%  Similarity=0.349  Sum_probs=54.1

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHH----Hc--CCCe-EEecC-CCcccHHHHHHHHHHHc
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAK----EL--GADN-IVKVS-TNLQDIAEEVEKIQKAM  251 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~----~l--g~~~-~~~~~-~~~~~~~~~i~~~~~~~  251 (364)
                      +|.++||+|+ +++|.+.++.+...|+ .|+.++++.++.+...    +.  +... .+..| ...+++.+.+....+..
T Consensus         3 ~gK~alITGas~GIG~aia~~la~~Ga-~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~   81 (258)
T d1iy8a_           3 TDRVVLITGGGSGLGRATAVRLAAEGA-KLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTERF   81 (258)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhhCCCCeEEEEeccCCCHHHHHHHHHHHHHHh
Confidence            5789999998 9999999999999999 6788888887755432    22  2221 12122 23345555555544433


Q ss_pred             CCCccEEEECCC
Q 017916          252 GTGIDVSFDCAG  263 (364)
Q Consensus       252 ~~~~d~vid~~g  263 (364)
                       +++|++++++|
T Consensus        82 -G~iDiLVnnAG   92 (258)
T d1iy8a_          82 -GRIDGFFNNAG   92 (258)
T ss_dssp             -SCCSEEEECCC
T ss_pred             -CCCCEEEECCc
Confidence             47999999887

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.62  E-value=0.0047  Score=51.72  Aligned_cols=84  Identities=17%  Similarity=0.107  Sum_probs=53.2

Q ss_pred             CCCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHH-----cCCCe-EEecCCCcccHHHHHHHHHHHcC
Q 017916          180 GPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKE-----LGADN-IVKVSTNLQDIAEEVEKIQKAMG  252 (364)
Q Consensus       180 ~~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~-----lg~~~-~~~~~~~~~~~~~~i~~~~~~~~  252 (364)
                      -+|.++||+|+ +++|.+.+..+...|+ .|+.++++.++.+.+.+     .+... ....+....+..+...+......
T Consensus        12 L~GK~alITGassGIG~aiA~~la~~G~-~Vil~~r~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~   90 (269)
T d1xu9a_          12 LQGKKVIVTGASKGIGREMAYHLAKMGA-HVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLM   90 (269)
T ss_dssp             GTTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHhhhhcccchhhhhhhhhHHHHHHHHHHHHHHh
Confidence            36899999998 9999999999999999 67888888887655432     23222 22222222222222222222234


Q ss_pred             CCccEEEECCCC
Q 017916          253 TGIDVSFDCAGF  264 (364)
Q Consensus       253 ~~~d~vid~~g~  264 (364)
                      +.+|+++++.|.
T Consensus        91 g~~~~li~nag~  102 (269)
T d1xu9a_          91 GGLDMLILNHIT  102 (269)
T ss_dssp             TSCSEEEECCCC
T ss_pred             CCcccccccccc
Confidence            578999887763

>d2avna1 c.66.1.41 (A:1-246) Hypothetical methyltransferase TM1389 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical methyltransferase TM1389
species: Thermotoga maritima [TaxId: 2336]

Probab=96.61  E-value=0.0041  Score=50.90  Aligned_cols=93  Identities=22%  Similarity=0.304  Sum_probs=67.5

Q ss_pred             CCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcCCCccEE
Q 017916          179 IGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVS  258 (364)
Q Consensus       179 ~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~v  258 (364)
                      .+++.+||=.|+|. |..+..+++ .|+ .|++++.+++..+.+++.+....+..+.  +++.        ...+.+|+|
T Consensus        40 ~~~~~~vLDiGcG~-G~~~~~l~~-~~~-~v~giD~s~~~l~~a~~~~~~~~~~~~~--~~l~--------~~~~~fD~i  106 (246)
T d2avna1          40 LKNPCRVLDLGGGT-GKWSLFLQE-RGF-EVVLVDPSKEMLEVAREKGVKNVVEAKA--EDLP--------FPSGAFEAV  106 (246)
T ss_dssp             CCSCCEEEEETCTT-CHHHHHHHT-TTC-EEEEEESCHHHHHHHHHHTCSCEEECCT--TSCC--------SCTTCEEEE
T ss_pred             cCCCCEEEEECCCC-chhcccccc-cce-EEEEeecccccccccccccccccccccc--cccc--------cccccccce
Confidence            46788999889874 888888876 487 7999999999999999877665554322  1210        113579999


Q ss_pred             EECCC------C-HHHHHHHHHhcccCCEEEEE
Q 017916          259 FDCAG------F-NKTMSTALSATRAGGKVCLV  284 (364)
Q Consensus       259 id~~g------~-~~~~~~~~~~l~~~G~~v~~  284 (364)
                      +....      + ...+..+.++|+|||.++..
T Consensus       107 i~~~~~~~~~~d~~~~l~~i~r~Lk~gG~~ii~  139 (246)
T d2avna1         107 LALGDVLSYVENKDKAFSEIRRVLVPDGLLIAT  139 (246)
T ss_dssp             EECSSHHHHCSCHHHHHHHHHHHEEEEEEEEEE
T ss_pred             eeecchhhhhhhHHHHHHHHHhhcCcCcEEEEE
Confidence            86533      1 34677899999999998764

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

Probab=96.60  E-value=0.0058  Score=50.55  Aligned_cols=82  Identities=18%  Similarity=0.206  Sum_probs=55.6

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHH-HHcCCC---eEEecCC-CcccHHHHHHHHHHHcCCC
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KELGAD---NIVKVST-NLQDIAEEVEKIQKAMGTG  254 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~-~~lg~~---~~~~~~~-~~~~~~~~i~~~~~~~~~~  254 (364)
                      +|.++||+|+ +++|.+.++.+...|+ .|+.++++.++.+.+ ++++..   ..+..|- ..++..+.++...+.. ++
T Consensus         5 ~gK~alVTGas~GIG~aia~~la~~Ga-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-G~   82 (251)
T d1zk4a1           5 DGKVAIITGGTLGIGLAIATKFVEEGA-KVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAF-GP   82 (251)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHH-SS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhCCCCcEEEEEccCCCHHHHHHHHHHHHHHh-CC
Confidence            5889999998 9999999999999999 577788887776644 445421   2222222 2234444454444433 47


Q ss_pred             ccEEEECCCC
Q 017916          255 IDVSFDCAGF  264 (364)
Q Consensus       255 ~d~vid~~g~  264 (364)
                      +|++++++|.
T Consensus        83 iDiLVnnAg~   92 (251)
T d1zk4a1          83 VSTLVNNAGI   92 (251)
T ss_dssp             CCEEEECCCC
T ss_pred             ceEEEecccc
Confidence            9999999874

>d1xxla_ c.66.1.41 (A:) Hypothetical protein YcgJ {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein YcgJ
species: Bacillus subtilis [TaxId: 1423]

Probab=96.59  E-value=0.0064  Score=49.58  Aligned_cols=101  Identities=19%  Similarity=0.202  Sum_probs=67.4

Q ss_pred             HHHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHH----cCCCeEEecCCCcccHHHHHHHHHH
Q 017916          174 CRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKE----LGADNIVKVSTNLQDIAEEVEKIQK  249 (364)
Q Consensus       174 l~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~i~~~~~  249 (364)
                      ++.+.+++|++||=.|+|. |..+..+++. +. .+++++.++.-.+.+++    .+...+.-....-+++.        
T Consensus         9 ~~~~~~~~~~rILDiGcGt-G~~~~~la~~-~~-~v~gvD~S~~~l~~A~~~~~~~~~~~~~~~~~d~~~~~--------   77 (234)
T d1xxla_           9 IKTAECRAEHRVLDIGAGA-GHTALAFSPY-VQ-ECIGVDATKEMVEVASSFAQEKGVENVRFQQGTAESLP--------   77 (234)
T ss_dssp             HHHHTCCTTCEEEEESCTT-SHHHHHHGGG-SS-EEEEEESCHHHHHHHHHHHHHHTCCSEEEEECBTTBCC--------
T ss_pred             HHHhCCCCCCEEEEeCCcC-cHHHHHHHHh-CC-eEEEEeCChhhhhhhhhhhccccccccccccccccccc--------
Confidence            3778999999999999765 6777788775 55 78999999877665543    34432211111111110        


Q ss_pred             HcCCCccEEEECCC------CHHHHHHHHHhcccCCEEEEEc
Q 017916          250 AMGTGIDVSFDCAG------FNKTMSTALSATRAGGKVCLVG  285 (364)
Q Consensus       250 ~~~~~~d~vid~~g------~~~~~~~~~~~l~~~G~~v~~g  285 (364)
                      ...+.+|+|+.+-.      -...++++.+.|+|+|+++...
T Consensus        78 ~~~~~fD~v~~~~~l~~~~d~~~~l~~~~r~LkpgG~~~~~~  119 (234)
T d1xxla_          78 FPDDSFDIITCRYAAHHFSDVRKAVREVARVLKQDGRFLLVD  119 (234)
T ss_dssp             SCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             ccccccceeeeeceeecccCHHHHHHHHHHeeCCCcEEEEEE
Confidence            01357999986432      1467889999999999988764

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=96.57  E-value=0.0057  Score=50.76  Aligned_cols=82  Identities=18%  Similarity=0.268  Sum_probs=54.9

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHH----HHHcCCCe-EEecCC-CcccHHHHHHHHHHHcCC
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSV----AKELGADN-IVKVST-NLQDIAEEVEKIQKAMGT  253 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~----~~~lg~~~-~~~~~~-~~~~~~~~i~~~~~~~~~  253 (364)
                      +|.++||+|+ +++|.+.++.+...|+ .|+.++++.++.+.    +++.|... .+..|- ..+++.+.++...+.. +
T Consensus        10 ~gK~alITGas~GIG~aia~~la~~Ga-~V~~~~r~~~~~~~~~~~l~~~g~~~~~~~~Dvs~~~~~~~~~~~~~~~~-g   87 (255)
T d1fmca_          10 DGKCAIITGAGAGIGKEIAITFATAGA-SVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKL-G   87 (255)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHTTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH-S
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHHc-C
Confidence            6889999998 9999999999999999 57777788766543    33455432 222222 2234444444444433 4


Q ss_pred             CccEEEECCCC
Q 017916          254 GIDVSFDCAGF  264 (364)
Q Consensus       254 ~~d~vid~~g~  264 (364)
                      ++|++++++|.
T Consensus        88 ~iDilvnnAG~   98 (255)
T d1fmca_          88 KVDILVNNAGG   98 (255)
T ss_dssp             SCCEEEECCCC
T ss_pred             CCCEeeeCCcC
Confidence            79999999874

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

Probab=96.52  E-value=0.0069  Score=50.84  Aligned_cols=81  Identities=22%  Similarity=0.268  Sum_probs=55.6

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHH-HHHcCCCe-EEecC-CCcccHHHHHHHHHHHcCCCcc
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSV-AKELGADN-IVKVS-TNLQDIAEEVEKIQKAMGTGID  256 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~-~~~lg~~~-~~~~~-~~~~~~~~~i~~~~~~~~~~~d  256 (364)
                      +|.++||+|+ +++|.+.++.+...|+ .|+.+++++++.+. .++++... .+..+ ...++..+.+....+.. +++|
T Consensus         4 ~gK~alITGas~GIG~aia~~la~~Ga-~V~i~~r~~~~l~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~-g~id   81 (276)
T d1bdba_           4 KGEAVLITGGASGLGRALVDRFVAEGA-KVAVLDKSAERLAELETDHGDNVLGIVGDVRSLEDQKQAASRCVARF-GKID   81 (276)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHH-SCCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHcCCCeeEEecccccHHHHHHHHHHHHHHh-CCcc
Confidence            5889999998 9999999999999999 67788888877654 45566432 12222 22234444444443333 5799


Q ss_pred             EEEECCC
Q 017916          257 VSFDCAG  263 (364)
Q Consensus       257 ~vid~~g  263 (364)
                      ++++++|
T Consensus        82 ilvnnAG   88 (276)
T d1bdba_          82 TLIPNAG   88 (276)
T ss_dssp             EEECCCC
T ss_pred             ccccccc
Confidence            9999887

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.50  E-value=0.0089  Score=49.46  Aligned_cols=103  Identities=18%  Similarity=0.233  Sum_probs=66.5

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHH-HHcC----CCe--EEecC-CCcccHHHHHHHHHHHc
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KELG----ADN--IVKVS-TNLQDIAEEVEKIQKAM  251 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~-~~lg----~~~--~~~~~-~~~~~~~~~i~~~~~~~  251 (364)
                      .|.++||+|+ +++|.+.++.+...|+ .|+.++++.++.+.+ +++.    ...  .+..| ...+++.+.++...+..
T Consensus         2 ~GKvalITGas~GIG~aia~~la~~Ga-~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   80 (254)
T d2gdza1           2 NGKVALVTGAAQGIGRAFAEALLLKGA-KVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHF   80 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHhcCCCcEEEEEeecCCHHHHHHHHHHHHHHc
Confidence            4789999998 9999999999999999 678888887765533 3332    111  12222 22344555555554433


Q ss_pred             CCCccEEEECCCCH-----------------HHHHHHHHhccc-----CCEEEEEc
Q 017916          252 GTGIDVSFDCAGFN-----------------KTMSTALSATRA-----GGKVCLVG  285 (364)
Q Consensus       252 ~~~~d~vid~~g~~-----------------~~~~~~~~~l~~-----~G~~v~~g  285 (364)
                       +++|++++++|..                 .....++..|.+     +|+++.++
T Consensus        81 -G~iDilVnnAg~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~~~g~Iv~is  135 (254)
T d2gdza1          81 -GRLDILVNNAGVNNEKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMS  135 (254)
T ss_dssp             -SCCCEEEECCCCCCSSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEEC
T ss_pred             -CCcCeecccccccccccchheeeeehhhHHHHHHHHHHHHHHhhcCCCcEEEeec
Confidence             4799999998852                 123344555543     47888876

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

Probab=96.48  E-value=0.01  Score=49.05  Aligned_cols=82  Identities=16%  Similarity=0.306  Sum_probs=52.6

Q ss_pred             CCCEEEEEcC-C--HHHHHHHHHHHHCCCCEEEEEecChhHHHHH----HHcCCCeEEecCCC-cccHHHHHHHHHHHcC
Q 017916          181 PETNVLIMGA-G--PIGLVTMLGARAFGAPRIVIVDVDDYRLSVA----KELGADNIVKVSTN-LQDIAEEVEKIQKAMG  252 (364)
Q Consensus       181 ~g~~VLI~Ga-g--~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~----~~lg~~~~~~~~~~-~~~~~~~i~~~~~~~~  252 (364)
                      +|.++||+|+ |  ++|.+.++.+...|++ |+.+.++++..+.+    +..+....+..+-. .++..+.+....+.. 
T Consensus         7 ~gK~alITGas~~~GIG~aiA~~la~~Ga~-V~i~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~-   84 (256)
T d1ulua_           7 SGKKALVMGVTNQRSLGFAIAAKLKEAGAE-VALSYQAERLRPEAEKLAEALGGALLFRADVTQDEELDALFAGVKEAF-   84 (256)
T ss_dssp             TTCEEEEESCCCSSSHHHHHHHHHHHTTCE-EEEEESSGGGHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred             CCCEEEEECCCCCchHHHHHHHHHHHCCCE-EEEEeCcHHHHHHHHHhhhccCcccccccccCCHHHHHHHHHHHHHhc-
Confidence            5789999997 5  6999999999999994 66666666544333    23343344433322 234444444444433 


Q ss_pred             CCccEEEECCCC
Q 017916          253 TGIDVSFDCAGF  264 (364)
Q Consensus       253 ~~~d~vid~~g~  264 (364)
                      +++|++++++|.
T Consensus        85 g~iDilVnnag~   96 (256)
T d1ulua_          85 GGLDYLVHAIAF   96 (256)
T ss_dssp             SSEEEEEECCCC
T ss_pred             CCceEEEecccc
Confidence            479999998863

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

Probab=96.48  E-value=0.0052  Score=50.93  Aligned_cols=82  Identities=28%  Similarity=0.327  Sum_probs=56.4

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHH-HHHcCCCe-EEecC-CCcccHHHHHHHHHHHcCCCcc
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSV-AKELGADN-IVKVS-TNLQDIAEEVEKIQKAMGTGID  256 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~-~~~lg~~~-~~~~~-~~~~~~~~~i~~~~~~~~~~~d  256 (364)
                      +|.++||+|+ +++|.+.++.+...|+ .|+.+++++++.+. .++++... .+..| ...++..+.++...+.. +++|
T Consensus         4 ~gK~alVTGas~GIG~aia~~la~~Ga-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-g~iD   81 (254)
T d1hdca_           4 SGKTVIITGGARGLGAEAARQAVAAGA-RVVLADVLDEEGAATARELGDAARYQHLDVTIEEDWQRVVAYAREEF-GSVD   81 (254)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTTGGGEEEEECCTTCHHHHHHHHHHHHHHH-SCCC
T ss_pred             CCCEEEEeCcCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhCCceEEEEcccCCHHHHHHHHHHHHHHc-CCcc
Confidence            5889999998 9999999999999999 57778888776654 45666332 22222 22344445555544433 4799


Q ss_pred             EEEECCCC
Q 017916          257 VSFDCAGF  264 (364)
Q Consensus       257 ~vid~~g~  264 (364)
                      ++|+++|.
T Consensus        82 ilVnnAg~   89 (254)
T d1hdca_          82 GLVNNAGI   89 (254)
T ss_dssp             EEEECCCC
T ss_pred             EEEecCcc
Confidence            99999874

>d1nw3a_ c.66.1.31 (A:) Catalytic, N-terminal domain of histone methyltransferase Dot1l {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Catalytic, N-terminal domain of histone methyltransferase Dot1l
domain: Catalytic, N-terminal domain of histone methyltransferase Dot1l
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.48  E-value=0.024  Score=48.71  Aligned_cols=105  Identities=14%  Similarity=0.152  Sum_probs=69.1

Q ss_pred             HHHHHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHH-----------cCCC--e--EEecCCC
Q 017916          172 HACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKE-----------LGAD--N--IVKVSTN  236 (364)
Q Consensus       172 ~~l~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~-----------lg~~--~--~~~~~~~  236 (364)
                      ..++..+++++++||=.|+|. |..+.++|+..++..+++++.+++..+++++           .|..  .  ++.-+-.
T Consensus       142 ~~~~~~~l~~~~~vlD~GcG~-G~~~~~~a~~~~~~~~~Gid~s~~~~~~a~~~~~~~~~~~~~~g~~~~~i~~~~gd~~  220 (328)
T d1nw3a_         142 QMIDEIKMTDDDLFVDLGSGV-GQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTLERGDFL  220 (328)
T ss_dssp             HHHHHSCCCTTCEEEEETCTT-SHHHHHHHHHCCCSEEEEEECSHHHHHHHHHHHHHHHHHHHHHTCCCCCEEEEECCTT
T ss_pred             HHHHHcCCCCCCEEEEcCCCC-CHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHhhhccccCCceEEEECccc
Confidence            446789999999999998765 7888999999999889999999977666543           1211  1  2221111


Q ss_pred             cccHHHHHHHHHHHcCCCccEEEEC-C-CCH---HHHHHHHHhcccCCEEEEEc
Q 017916          237 LQDIAEEVEKIQKAMGTGIDVSFDC-A-GFN---KTMSTALSATRAGGKVCLVG  285 (364)
Q Consensus       237 ~~~~~~~i~~~~~~~~~~~d~vid~-~-g~~---~~~~~~~~~l~~~G~~v~~g  285 (364)
                      ..++.+.+        ..+|+|+-. . -.+   ..+.++++.|+|||+++...
T Consensus       221 ~~~~~~~~--------~~advi~~~~~~f~~~~~~~l~e~~r~LKpGg~iv~~~  266 (328)
T d1nw3a_         221 SEEWRERI--------ANTSVIFVNNFAFGPEVDHQLKERFANMKEGGRIVSSK  266 (328)
T ss_dssp             SHHHHHHH--------HHCSEEEECCTTTCHHHHHHHHHHHTTCCTTCEEEESS
T ss_pred             cccccccc--------CcceEEEEcceecchHHHHHHHHHHHhCCCCcEEEEec
Confidence            12222221        135777742 1 123   35667888999999999764

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

Probab=96.46  E-value=0.014  Score=48.06  Aligned_cols=82  Identities=21%  Similarity=0.251  Sum_probs=54.5

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChh--HHHHHHHcCCCeE-EecC-CCcccHHHHHHHHHHHcCCCc
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDY--RLSVAKELGADNI-VKVS-TNLQDIAEEVEKIQKAMGTGI  255 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~--~~~~~~~lg~~~~-~~~~-~~~~~~~~~i~~~~~~~~~~~  255 (364)
                      +|.++||+|+ +++|.+.++.+...|+ .|+.++.+++  ..+.++++|.... +..| ...++..+.++...+.. +++
T Consensus         4 ~gKvalVTGas~GIG~aia~~la~~Ga-~V~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~-G~i   81 (247)
T d2ew8a1           4 KDKLAVITGGANGIGRAIAERFAVEGA-DIAIADLVPAPEAEAAIRNLGRRVLTVKCDVSQPGDVEAFGKQVISTF-GRC   81 (247)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCCHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH-SCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCchHHHHHHHHHcCCcEEEEEeeCCCHHHHHHHHHHHHHHc-CCC
Confidence            5789999998 9999999999999999 5666766543  2345566775432 2222 22344444444444433 479


Q ss_pred             cEEEECCCC
Q 017916          256 DVSFDCAGF  264 (364)
Q Consensus       256 d~vid~~g~  264 (364)
                      |++++++|.
T Consensus        82 DilVnnAG~   90 (247)
T d2ew8a1          82 DILVNNAGI   90 (247)
T ss_dssp             CEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999999874

>d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Escherichia coli [TaxId: 562]

Probab=96.46  E-value=0.012  Score=45.36  Aligned_cols=80  Identities=19%  Similarity=0.260  Sum_probs=52.8

Q ss_pred             HHHHHcC-CCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHH-HHcCCC-eEEecCCCcccHHHHHHHHH
Q 017916          172 HACRRAN-IGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KELGAD-NIVKVSTNLQDIAEEVEKIQ  248 (364)
Q Consensus       172 ~~l~~~~-~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~-~~lg~~-~~~~~~~~~~~~~~~i~~~~  248 (364)
                      ++|+..+ ..+|.+|||.|+|+.+.+++.-+..+|+ .+..+.++.+|.+.+ +.+... .+.....  .+         
T Consensus         7 ~~l~~~~~~~~~k~vlIlGaGGaarai~~al~~~g~-~i~I~nRt~~ka~~l~~~~~~~~~~~~~~~--~~---------   74 (170)
T d1nyta1           7 SDLERLSFIRPGLRILLIGAGGASRGVLLPLLSLDC-AVTITNRTVSRAEELAKLFAHTGSIQALSM--DE---------   74 (170)
T ss_dssp             HHHHHHTCCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSHHHHHHHHHHTGGGSSEEECCS--GG---------
T ss_pred             HHHHHcCCCCCCCEEEEECCcHHHHHHHHHhcccce-EEEeccchHHHHHHHHHHHhhccccccccc--cc---------
Confidence            3454433 4578999999999999999999899998 588888888876654 433321 1111111  00         


Q ss_pred             HHcCCCccEEEECCCC
Q 017916          249 KAMGTGIDVSFDCAGF  264 (364)
Q Consensus       249 ~~~~~~~d~vid~~g~  264 (364)
                       .....+|++|+|+..
T Consensus        75 -~~~~~~dliIN~Tp~   89 (170)
T d1nyta1          75 -LEGHEFDLIINATSS   89 (170)
T ss_dssp             -GTTCCCSEEEECCSC
T ss_pred             -ccccccceeeccccc
Confidence             013578999999764

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=96.46  E-value=0.0096  Score=48.59  Aligned_cols=73  Identities=19%  Similarity=0.201  Sum_probs=49.5

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcCCCccEEE
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF  259 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vi  259 (364)
                      +|.++||+|+ +++|.+.++.+...|+ .|+.+++++++   +++.+.... ..+ -..+    +..+.+.. +++|+++
T Consensus         3 kgK~~lVTGas~GIG~aia~~l~~~Ga-~V~~~~r~~~~---l~~~~~~~~-~~D-v~~~----~~~~~~~~-g~iD~lV   71 (234)
T d1o5ia_           3 RDKGVLVLAASRGIGRAVADVLSQEGA-EVTICARNEEL---LKRSGHRYV-VCD-LRKD----LDLLFEKV-KEVDILV   71 (234)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHH---HHHTCSEEE-ECC-TTTC----HHHHHHHS-CCCSEEE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHH---HHhcCCcEE-Ecc-hHHH----HHHHHHHh-CCCcEEE
Confidence            4789999998 9999999999999999 57777776544   455554332 221 1223    22233322 4799999


Q ss_pred             ECCCC
Q 017916          260 DCAGF  264 (364)
Q Consensus       260 d~~g~  264 (364)
                      +++|.
T Consensus        72 nnAG~   76 (234)
T d1o5ia_          72 LNAGG   76 (234)
T ss_dssp             ECCCC
T ss_pred             ecccc
Confidence            99874

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

Probab=96.43  E-value=0.0084  Score=49.85  Aligned_cols=82  Identities=22%  Similarity=0.259  Sum_probs=52.7

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChh-HH----HHHHHcCCCeE-EecCC-CcccHHHHHHHHHHHcC
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDY-RL----SVAKELGADNI-VKVST-NLQDIAEEVEKIQKAMG  252 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~-~~----~~~~~lg~~~~-~~~~~-~~~~~~~~i~~~~~~~~  252 (364)
                      +|.++||+|+ +++|.+.++.+...|+ .|+.+.++.+ +.    +.+++.|.... +..|- ..++..+.++...+.. 
T Consensus         6 ~gK~alITGas~GIG~aia~~la~~G~-~Vv~~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~-   83 (261)
T d1geea_           6 EGKVVVITGSSTGLGKSMAIRFATEKA-KVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEF-   83 (261)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHH-
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCcHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHh-
Confidence            5789999987 9999999999999999 5666666543 32    33445564322 22222 2234444444444433 


Q ss_pred             CCccEEEECCCC
Q 017916          253 TGIDVSFDCAGF  264 (364)
Q Consensus       253 ~~~d~vid~~g~  264 (364)
                      +++|++++++|.
T Consensus        84 G~iDiLVnnAG~   95 (261)
T d1geea_          84 GKLDVMINNAGL   95 (261)
T ss_dssp             SCCCEEEECCCC
T ss_pred             CCCCEeecccee
Confidence            479999999874

>d1nt2a_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=96.41  E-value=0.0094  Score=47.74  Aligned_cols=102  Identities=14%  Similarity=0.070  Sum_probs=66.3

Q ss_pred             HHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHH----cCCCeEEecCCCcccHHHHHHHHHHH
Q 017916          175 RRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKE----LGADNIVKVSTNLQDIAEEVEKIQKA  250 (364)
Q Consensus       175 ~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~i~~~~~~  250 (364)
                      ....++||++||=.|+|. |..+..+++..+...|++++-+++..+.+++    .+-...+..+.......       ..
T Consensus        50 ~~l~lkpg~~VLDlGcG~-G~~~~~la~~v~~g~V~gvDis~~~i~~a~~~a~~~~ni~~i~~d~~~~~~~-------~~  121 (209)
T d1nt2a_          50 HRLKLRGDERVLYLGAAS-GTTVSHLADIVDEGIIYAVEYSAKPFEKLLELVRERNNIIPLLFDASKPWKY-------SG  121 (209)
T ss_dssp             CCCCCCSSCEEEEETCTT-SHHHHHHHHHTTTSEEEEECCCHHHHHHHHHHHHHCSSEEEECSCTTCGGGT-------TT
T ss_pred             ccCCCCCCCEEEEeCCcC-CHHHHHHHHhccCCeEEEEeCCHHHHHHHHHHhhccCCceEEEeeccCcccc-------cc
Confidence            347789999999999865 6788888888876689999999987776543    33212222221111110       00


Q ss_pred             cCCCccEEEECCCC----HHHHHHHHHhcccCCEEEEE
Q 017916          251 MGTGIDVSFDCAGF----NKTMSTALSATRAGGKVCLV  284 (364)
Q Consensus       251 ~~~~~d~vid~~g~----~~~~~~~~~~l~~~G~~v~~  284 (364)
                      ....+|+++....-    ...+.++.+.|+++|+++..
T Consensus       122 ~~~~vd~v~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~  159 (209)
T d1nt2a_         122 IVEKVDLIYQDIAQKNQIEILKANAEFFLKEKGEVVIM  159 (209)
T ss_dssp             TCCCEEEEEECCCSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             ccceEEEEEecccChhhHHHHHHHHHHHhccCCeEEEE
Confidence            12357777654321    23567788999999999865

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

Probab=96.39  E-value=0.011  Score=49.54  Aligned_cols=81  Identities=21%  Similarity=0.272  Sum_probs=54.3

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHH----HHcCCC--e--EEecC-CCcccHHHHHHHHHHH
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA----KELGAD--N--IVKVS-TNLQDIAEEVEKIQKA  250 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~----~~lg~~--~--~~~~~-~~~~~~~~~i~~~~~~  250 (364)
                      +|.++||+|+ +++|.+.++.+...|+ .|+.+++++++.+.+    ++.+..  .  .+..| ...++..+.++...+.
T Consensus         3 ~gK~alITGas~GIG~aia~~la~~Ga-~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   81 (274)
T d1xhla_           3 SGKSVIITGSSNGIGRSAAVIFAKEGA-QVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLAK   81 (274)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHcCCCCcceEEEEeeCCCHHHHHHHHHHHHHH
Confidence            5889999998 9999999999999999 678888887765543    233322  1  22222 2224444445544443


Q ss_pred             cCCCccEEEECCC
Q 017916          251 MGTGIDVSFDCAG  263 (364)
Q Consensus       251 ~~~~~d~vid~~g  263 (364)
                      . +++|++++++|
T Consensus        82 ~-G~iDilVnnAG   93 (274)
T d1xhla_          82 F-GKIDILVNNAG   93 (274)
T ss_dssp             H-SCCCEEEECCC
T ss_pred             c-CCceEEEeecc
Confidence            3 47999999877

>d1u2za_ c.66.1.31 (A:) Catalytic, N-terminal domain of histone methyltransferase Dot1l {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Catalytic, N-terminal domain of histone methyltransferase Dot1l
domain: Catalytic, N-terminal domain of histone methyltransferase Dot1l
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=96.39  E-value=0.022  Score=50.14  Aligned_cols=110  Identities=15%  Similarity=0.144  Sum_probs=70.8

Q ss_pred             HHHHHHHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHc-----------CC--Ce-EEecCC
Q 017916          170 GLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKEL-----------GA--DN-IVKVST  235 (364)
Q Consensus       170 a~~~l~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~l-----------g~--~~-~~~~~~  235 (364)
                      ....++..++++|++||=.|+|. |..+.++|+..|++.+++++.++...+++++.           +.  .. .+....
T Consensus       205 i~~Il~~l~Lkpgd~fLDLGCG~-G~~vl~aA~~~g~~~v~GIDiS~~~i~~Ak~~~~e~~~~~~~~g~~~~~~~~~~~~  283 (406)
T d1u2za_         205 LSDVYQQCQLKKGDTFMDLGSGV-GNCVVQAALECGCALSFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNVEFSLKK  283 (406)
T ss_dssp             HHHHHHHTTCCTTCEEEEESCTT-SHHHHHHHHHHCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCEEEEESS
T ss_pred             HHHHHHHhCCCCCCEEEeCCCCC-cHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHHHhhhhhhhccccccceeeeee
Confidence            44567889999999999899765 88999999999988899999998776666532           11  11 111111


Q ss_pred             CcccHHHHHHHHHHHcCCCccEEEEC-C-CCH---HHHHHHHHhcccCCEEEEEc
Q 017916          236 NLQDIAEEVEKIQKAMGTGIDVSFDC-A-GFN---KTMSTALSATRAGGKVCLVG  285 (364)
Q Consensus       236 ~~~~~~~~i~~~~~~~~~~~d~vid~-~-g~~---~~~~~~~~~l~~~G~~v~~g  285 (364)
                      ...+ .+.....    -..+|+++-. . -.+   ..+.++.+.|+|||+++...
T Consensus       284 ~f~~-~~~~d~~----~~~adVV~inn~~f~~~l~~~L~ei~r~LKPGGrIVs~~  333 (406)
T d1u2za_         284 SFVD-NNRVAEL----IPQCDVILVNNFLFDEDLNKKVEKILQTAKVGCKIISLK  333 (406)
T ss_dssp             CSTT-CHHHHHH----GGGCSEEEECCTTCCHHHHHHHHHHHTTCCTTCEEEESS
T ss_pred             chhh-ccccccc----cccceEEEEecccCchHHHHHHHHHHHhcCCCcEEEEec
Confidence            1000 0111111    1357777642 1 122   45668888999999999864

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=96.36  E-value=0.018  Score=47.19  Aligned_cols=102  Identities=18%  Similarity=0.175  Sum_probs=62.5

Q ss_pred             EEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHH----HHHcCCCe-EEecCC-CcccHHHHHHHHHHHcCCCcc
Q 017916          184 NVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSV----AKELGADN-IVKVST-NLQDIAEEVEKIQKAMGTGID  256 (364)
Q Consensus       184 ~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~----~~~lg~~~-~~~~~~-~~~~~~~~i~~~~~~~~~~~d  256 (364)
                      .|||+|+ +++|.+.++.+...|+++++...+++++.+.    +++.|... .+..|- ..++..+.++...+. -+++|
T Consensus         3 V~lITGas~GIG~a~a~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~-~g~iD   81 (244)
T d1edoa_           3 VVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDA-WGTID   81 (244)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHH-SSCCS
T ss_pred             EEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHHHHHH-cCCCC
Confidence            5688887 9999999999999999544444455554433    33455432 222222 223444444444443 35799


Q ss_pred             EEEECCCCH-------------------------HHHHHHHHhc--ccCCEEEEEcC
Q 017916          257 VSFDCAGFN-------------------------KTMSTALSAT--RAGGKVCLVGM  286 (364)
Q Consensus       257 ~vid~~g~~-------------------------~~~~~~~~~l--~~~G~~v~~g~  286 (364)
                      ++++++|..                         ...+.++..|  +.+|+++.++.
T Consensus        82 iLVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS  138 (244)
T d1edoa_          82 VVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIAS  138 (244)
T ss_dssp             EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECC
T ss_pred             ccccccccccccchhccchHHHHHHHhhhhhhHHHHHHHHHHHHHHcCCcEEEEEcC
Confidence            999998742                         1344455566  45799998863

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

Probab=96.35  E-value=0.0078  Score=50.38  Aligned_cols=82  Identities=24%  Similarity=0.285  Sum_probs=54.5

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHH----HcCCC--e--EEecC-CCcccHHHHHHHHHHH
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAK----ELGAD--N--IVKVS-TNLQDIAEEVEKIQKA  250 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~----~lg~~--~--~~~~~-~~~~~~~~~i~~~~~~  250 (364)
                      +|.++||+|+ +++|.+.++.+...|+ .|+.+++++++.+.+.    +.+..  .  .+..| ...+++.+.++...+.
T Consensus         4 ~gK~alVTGas~GIG~aia~~la~~Ga-~V~l~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~~   82 (272)
T d1xkqa_           4 SNKTVIITGSSNGIGRTTAILFAQEGA-NVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLKQ   82 (272)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCcCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCCCceEEEEccCCCHHHHHHHHHHHHHH
Confidence            5789999998 9999999999999999 6788888887765432    23321  1  22222 2233444445444443


Q ss_pred             cCCCccEEEECCCC
Q 017916          251 MGTGIDVSFDCAGF  264 (364)
Q Consensus       251 ~~~~~d~vid~~g~  264 (364)
                      . +++|++++++|.
T Consensus        83 ~-g~iDilvnnAG~   95 (272)
T d1xkqa_          83 F-GKIDVLVNNAGA   95 (272)
T ss_dssp             H-SCCCEEEECCCC
T ss_pred             h-CCceEEEeCCcc
Confidence            3 479999998774

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

Probab=96.32  E-value=0.01  Score=49.28  Aligned_cols=82  Identities=20%  Similarity=0.275  Sum_probs=54.0

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHH-----HHHHcCCCe-EEecCC-CcccHHHHHHHHHHHcC
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLS-----VAKELGADN-IVKVST-NLQDIAEEVEKIQKAMG  252 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~-----~~~~lg~~~-~~~~~~-~~~~~~~~i~~~~~~~~  252 (364)
                      +|.++||+|+ +++|.+.++.+...|+ .|+.++++.++..     +.++.|... .+..|- ..++..+.++...+. -
T Consensus         8 ~gK~alITGas~GIG~aia~~la~~Ga-~V~i~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~-~   85 (260)
T d1h5qa_           8 VNKTIIVTGGNRGIGLAFTRAVAAAGA-NVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDAD-L   85 (260)
T ss_dssp             TTEEEEEETTTSHHHHHHHHHHHHTTE-EEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHH-S
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHH-h
Confidence            5789999998 9999999999999999 5777777665432     234456432 222222 234444444444433 3


Q ss_pred             CCccEEEECCCC
Q 017916          253 TGIDVSFDCAGF  264 (364)
Q Consensus       253 ~~~d~vid~~g~  264 (364)
                      +++|++++++|.
T Consensus        86 g~iDilVnnAg~   97 (260)
T d1h5qa_          86 GPISGLIANAGV   97 (260)
T ss_dssp             CSEEEEEECCCC
T ss_pred             CCCcEecccccc
Confidence            589999998873

>d2nxca1 c.66.1.39 (A:1-254) PrmA-like protein TTHA0656 (TT0836) {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ribosomal protein L11 methyltransferase PrmA
domain: PrmA-like protein TTHA0656 (TT0836)
species: Thermus thermophilus [TaxId: 274]

Probab=96.32  E-value=0.027  Score=46.40  Aligned_cols=94  Identities=20%  Similarity=0.252  Sum_probs=61.8

Q ss_pred             CCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHH----cCCCeEEecCCCcccHHHHHHHHHHHcCCC
Q 017916          179 IGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKE----LGADNIVKVSTNLQDIAEEVEKIQKAMGTG  254 (364)
Q Consensus       179 ~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~  254 (364)
                      .++|++||=.|+|. |..++.++ .+|+ .|++++.+++..+.+++    .+....+..    .+..+    ..  ..+.
T Consensus       118 ~~~g~~VLDiGcGs-G~l~i~aa-~~g~-~V~gvDis~~av~~A~~na~~n~~~~~~~~----~d~~~----~~--~~~~  184 (254)
T d2nxca1         118 LRPGDKVLDLGTGS-GVLAIAAE-KLGG-KALGVDIDPMVLPQAEANAKRNGVRPRFLE----GSLEA----AL--PFGP  184 (254)
T ss_dssp             CCTTCEEEEETCTT-SHHHHHHH-HTTC-EEEEEESCGGGHHHHHHHHHHTTCCCEEEE----SCHHH----HG--GGCC
T ss_pred             cCccCEEEEcccch-hHHHHHHH-hcCC-EEEEEECChHHHHHHHHHHHHcCCceeEEe----ccccc----cc--cccc
Confidence            57999999998754 55666555 4687 68999999987776653    444322211    22221    11  1357


Q ss_pred             ccEEEECCCCH---HHHHHHHHhcccCCEEEEEc
Q 017916          255 IDVSFDCAGFN---KTMSTALSATRAGGKVCLVG  285 (364)
Q Consensus       255 ~d~vid~~g~~---~~~~~~~~~l~~~G~~v~~g  285 (364)
                      +|+|+......   +.+..+.++|+|+|+++..|
T Consensus       185 fD~V~ani~~~~l~~l~~~~~~~LkpGG~lilSg  218 (254)
T d2nxca1         185 FDLLVANLYAELHAALAPRYREALVPGGRALLTG  218 (254)
T ss_dssp             EEEEEEECCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             cchhhhccccccHHHHHHHHHHhcCCCcEEEEEe
Confidence            99998755422   34556788999999999765

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

Probab=96.31  E-value=0.013  Score=47.90  Aligned_cols=104  Identities=21%  Similarity=0.264  Sum_probs=69.5

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHH-HHHHcCCCeE-EecC-CCcccHHHHHHHHHHHcCCCcc
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLS-VAKELGADNI-VKVS-TNLQDIAEEVEKIQKAMGTGID  256 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~-~~~~lg~~~~-~~~~-~~~~~~~~~i~~~~~~~~~~~d  256 (364)
                      +|.++||+|+ +++|.+.++-+...|+ .|+.+.++.++.+ ..++++.... +..| ...++..+.++...+.. +++|
T Consensus         4 ~gK~alItGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~i~~~~~~i~~~~-g~iD   81 (241)
T d2a4ka1           4 SGKTILVTGAASGIGRAALDLFAREGA-SLVAVDREERLLAEAVAALEAEAIAVVADVSDPKAVEAVFAEALEEF-GRLH   81 (241)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTCCSSEEEEECCTTSHHHHHHHHHHHHHHH-SCCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHcCCceEEEEecCCCHHHHHHHHHHHHHHh-CCcc
Confidence            6889999998 9999999999999999 6777778887654 4456775432 2122 22344444444444333 4799


Q ss_pred             EEEECCCCH-------------------------HHHHHHHHhcccCCEEEEEcC
Q 017916          257 VSFDCAGFN-------------------------KTMSTALSATRAGGKVCLVGM  286 (364)
Q Consensus       257 ~vid~~g~~-------------------------~~~~~~~~~l~~~G~~v~~g~  286 (364)
                      ++|+++|..                         ...+..+..+..++.++..+.
T Consensus        82 iLinnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~k~~~~~~~~~~~i~~~ss  136 (241)
T d2a4ka1          82 GVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGS  136 (241)
T ss_dssp             EEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECC
T ss_pred             Eeccccccccccchhhhhccccccccccccccccccccccccccccccceeeccc
Confidence            999987632                         133455667777777776654

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=96.31  E-value=0.0084  Score=48.93  Aligned_cols=96  Identities=21%  Similarity=0.313  Sum_probs=59.1

Q ss_pred             CCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHH----HHHHHHH-cCCCc
Q 017916          182 ETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEE----VEKIQKA-MGTGI  255 (364)
Q Consensus       182 g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~----i~~~~~~-~~~~~  255 (364)
                      +.+|||+|+ +++|.+.++.+...|+ .|+.++.++++..       ....... ...++.+.    ....... ..+++
T Consensus         2 ~gkVlITGas~GIG~aia~~l~~~G~-~V~~~~~~~~~~~-------~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~i   72 (235)
T d1ooea_           2 SGKVIVYGGKGALGSAILEFFKKNGY-TVLNIDLSANDQA-------DSNILVD-GNKNWTEQEQSILEQTASSLQGSQV   72 (235)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTE-EEEEEESSCCTTS-------SEEEECC-TTSCHHHHHHHHHHHHHHHHTTCCE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCchhcc-------cccceec-cccCchhHHHHHHHHHHHHhcCCCe
Confidence            357999998 9999999999999999 5777776654311       1111111 11122221    1111111 24679


Q ss_pred             cEEEECCCCH--------------------------HHHHHHHHhcccCCEEEEEcC
Q 017916          256 DVSFDCAGFN--------------------------KTMSTALSATRAGGKVCLVGM  286 (364)
Q Consensus       256 d~vid~~g~~--------------------------~~~~~~~~~l~~~G~~v~~g~  286 (364)
                      |++|+++|..                          ...+..+..|+++|+++.++.
T Consensus        73 D~linnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~Iv~isS  129 (235)
T d1ooea_          73 DGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGA  129 (235)
T ss_dssp             EEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECC
T ss_pred             eEEEECCcccccccccccCcHHHHhhHhhhHHHHHHHHhhhcccccccceEEEEecc
Confidence            9999998731                          133456667788899998863

>d1vl5a_ c.66.1.41 (A:) Hypothetical protein BH2331 {Bacillus halodurans [TaxId: 86665]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein BH2331
species: Bacillus halodurans [TaxId: 86665]

Probab=96.31  E-value=0.01  Score=47.97  Aligned_cols=102  Identities=20%  Similarity=0.201  Sum_probs=67.6

Q ss_pred             HHHHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHH----cCCCeEEecCCCcccHHHHHHHHH
Q 017916          173 ACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKE----LGADNIVKVSTNLQDIAEEVEKIQ  248 (364)
Q Consensus       173 ~l~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~i~~~~  248 (364)
                      .++.++++++++||=.|+|. |..+..+++. |. .+++++.+++-.+.+++    .+...+--+....+++.       
T Consensus         7 ll~~~~l~~~~rVLDiGcG~-G~~~~~l~~~-~~-~v~gvD~s~~~i~~A~~~~~~~~~~~i~~~~~d~~~l~-------   76 (231)
T d1vl5a_           7 LMQIAALKGNEEVLDVATGG-GHVANAFAPF-VK-KVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDAEQMP-------   76 (231)
T ss_dssp             HHHHHTCCSCCEEEEETCTT-CHHHHHHGGG-SS-EEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC-CCC-------
T ss_pred             HHHhcCCCCcCEEEEecccC-cHHHHHHHHh-CC-EEEEEECCHHHHhhhhhccccccccccccccccccccc-------
Confidence            35778999999999999763 6677777755 66 68999999877666543    45443211111111110       


Q ss_pred             HHcCCCccEEEECCC-----C-HHHHHHHHHhcccCCEEEEEc
Q 017916          249 KAMGTGIDVSFDCAG-----F-NKTMSTALSATRAGGKVCLVG  285 (364)
Q Consensus       249 ~~~~~~~d~vid~~g-----~-~~~~~~~~~~l~~~G~~v~~g  285 (364)
                       ...+.+|+|+..-.     . ...+.++.++|+|||+++...
T Consensus        77 -~~~~~fD~v~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~i~~  118 (231)
T d1vl5a_          77 -FTDERFHIVTCRIAAHHFPNPASFVSEAYRVLKKGGQLLLVD  118 (231)
T ss_dssp             -SCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             -ccccccccccccccccccCCHHHHHHHHHHhcCCCcEEEEEe
Confidence             01356999986432     2 367889999999999999764

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.28  E-value=0.016  Score=49.02  Aligned_cols=83  Identities=19%  Similarity=0.220  Sum_probs=54.4

Q ss_pred             CCCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHH-HHc--------CCCe-EEecC-CCcccHHHHHHHH
Q 017916          180 GPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KEL--------GADN-IVKVS-TNLQDIAEEVEKI  247 (364)
Q Consensus       180 ~~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~-~~l--------g~~~-~~~~~-~~~~~~~~~i~~~  247 (364)
                      -+|.++||+|+ +++|.+.++.+...|+ .|+.++++.++.+.+ +++        +... .+..| ...+++.+.++..
T Consensus        10 L~gKvalITGas~GIG~aia~~la~~Ga-~Vvi~~r~~~~l~~~~~el~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~   88 (297)
T d1yxma1          10 LQGQVAIVTGGATGIGKAIVKELLELGS-NVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKST   88 (297)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhhhccccCceEEEEeccCCCHHHHHHHHHHH
Confidence            46899999998 9999999999999999 577888887765432 332        2221 12222 2234444445444


Q ss_pred             HHHcCCCccEEEECCCC
Q 017916          248 QKAMGTGIDVSFDCAGF  264 (364)
Q Consensus       248 ~~~~~~~~d~vid~~g~  264 (364)
                      .+.. +++|++|+++|.
T Consensus        89 ~~~~-G~iDiLVnnAg~  104 (297)
T d1yxma1          89 LDTF-GKINFLVNNGGG  104 (297)
T ss_dssp             HHHH-SCCCEEEECCCC
T ss_pred             HHHh-CCeEEEEeeccc
Confidence            4433 479999998874

>d2o57a1 c.66.1.18 (A:16-297) Putative sarcosine dimethylglycine methyltransferase {Red algae (Galdieria sulphuraria) [TaxId: 130081]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: Putative sarcosine dimethylglycine methyltransferase
species: Red algae (Galdieria sulphuraria) [TaxId: 130081]

Probab=96.28  E-value=0.014  Score=48.87  Aligned_cols=99  Identities=16%  Similarity=0.173  Sum_probs=67.6

Q ss_pred             HHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHH----cCCCe---EEecCCCcccHHHHHHHH
Q 017916          175 RRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKE----LGADN---IVKVSTNLQDIAEEVEKI  247 (364)
Q Consensus       175 ~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~----lg~~~---~~~~~~~~~~~~~~i~~~  247 (364)
                      ....++++++||=.|+|. |..+..+++..|+ .|++++.++...+.+++    .|...   ++.-+.  .++       
T Consensus        61 ~~~~l~~~~~vLDiGcG~-G~~~~~la~~~~~-~v~gvD~s~~~i~~a~~~~~~~gl~~~v~~~~~d~--~~l-------  129 (282)
T d2o57a1          61 MTGVLQRQAKGLDLGAGY-GGAARFLVRKFGV-SIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSF--LEI-------  129 (282)
T ss_dssp             HTTCCCTTCEEEEETCTT-SHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCT--TSC-------
T ss_pred             HhcCCCCCCEEEEeCCCC-cHHHhhhhccCCc-EEEEEeccchhhhhhhccccccccccccccccccc--ccc-------
Confidence            457899999999999764 6678888888888 68999999877665554    34431   221111  111       


Q ss_pred             HHHcCCCccEEEECC-----CC-HHHHHHHHHhcccCCEEEEEc
Q 017916          248 QKAMGTGIDVSFDCA-----GF-NKTMSTALSATRAGGKVCLVG  285 (364)
Q Consensus       248 ~~~~~~~~d~vid~~-----g~-~~~~~~~~~~l~~~G~~v~~g  285 (364)
                       ....+.+|+|+..-     .+ ...+..+.++|+|+|+++...
T Consensus       130 -~~~~~sfD~V~~~~~l~h~~d~~~~l~~~~~~LkpgG~l~~~~  172 (282)
T d2o57a1         130 -PCEDNSYDFIWSQDAFLHSPDKLKVFQECARVLKPRGVMAITD  172 (282)
T ss_dssp             -SSCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             -cccccccchhhccchhhhccCHHHHHHHHHHhcCCCcEEEEEE
Confidence             00135699997532     21 367789999999999998765

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

Probab=96.28  E-value=0.021  Score=47.11  Aligned_cols=81  Identities=21%  Similarity=0.249  Sum_probs=53.7

Q ss_pred             CCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHH----HHcCCCe-EEecC-CCcccHHHHHHHHHHHcCCC
Q 017916          182 ETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA----KELGADN-IVKVS-TNLQDIAEEVEKIQKAMGTG  254 (364)
Q Consensus       182 g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~----~~lg~~~-~~~~~-~~~~~~~~~i~~~~~~~~~~  254 (364)
                      |..+||+|+ +++|.+.++.+...|+ .|+.+++++++.+.+    ++.|... .+..| ...++..+.++...+. -++
T Consensus         2 gKValITGas~GIG~aia~~la~~Ga-~V~i~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~-~g~   79 (257)
T d2rhca1           2 SEVALVTGATSGIGLEIARRLGKEGL-RVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVER-YGP   79 (257)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH-TCS
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHH-hCC
Confidence            567799998 9999999999999999 577778887665432    3445432 12222 2234444444444443 357


Q ss_pred             ccEEEECCCC
Q 017916          255 IDVSFDCAGF  264 (364)
Q Consensus       255 ~d~vid~~g~  264 (364)
                      +|++|+++|.
T Consensus        80 iDilVnnAG~   89 (257)
T d2rhca1          80 VDVLVNNAGR   89 (257)
T ss_dssp             CSEEEECCCC
T ss_pred             CCEEEecccc
Confidence            9999999874

>d1pjza_ c.66.1.36 (A:) Thiopurine S-methyltransferase {Pseudomonas syringae [TaxId: 317]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Pseudomonas syringae [TaxId: 317]

Probab=96.26  E-value=0.02  Score=44.76  Aligned_cols=99  Identities=12%  Similarity=0.031  Sum_probs=65.5

Q ss_pred             HHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHc-CCCe-----------------EEecCCC
Q 017916          175 RRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKEL-GADN-----------------IVKVSTN  236 (364)
Q Consensus       175 ~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~l-g~~~-----------------~~~~~~~  236 (364)
                      ....+++|.+||..|+|. |..++.||+. |+ .|++++.+++..+.+++. +...                 .+.-+. 
T Consensus        14 ~~l~~~~~~rvLd~GCG~-G~~a~~la~~-G~-~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~-   89 (201)
T d1pjza_          14 SSLNVVPGARVLVPLCGK-SQDMSWLSGQ-GY-HVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDF-   89 (201)
T ss_dssp             HHHCCCTTCEEEETTTCC-SHHHHHHHHH-CC-EEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECC-
T ss_pred             HHcCCCCCCEEEEecCcC-CHHHHHHHHc-CC-ceEeecccHHHHHHHHHHhccccchhhhhhhhhccccccceecccc-
Confidence            446789999999999765 6788888874 98 799999999999888763 2110                 000000 


Q ss_pred             cccHHHHHHHHHHHcCCCccEEEECCCC--------HHHHHHHHHhcccCCEEEEEc
Q 017916          237 LQDIAEEVEKIQKAMGTGIDVSFDCAGF--------NKTMSTALSATRAGGKVCLVG  285 (364)
Q Consensus       237 ~~~~~~~i~~~~~~~~~~~d~vid~~g~--------~~~~~~~~~~l~~~G~~v~~g  285 (364)
                       .++...       ....+|+|++...-        ...+..+.++|+|+|+++...
T Consensus        90 -~~l~~~-------~~~~~D~i~~~~~l~~l~~~~~~~~~~~i~~~LkpgG~l~l~~  138 (201)
T d1pjza_          90 -FALTAR-------DIGHCAAFYDRAAMIALPADMRERYVQHLEALMPQACSGLLIT  138 (201)
T ss_dssp             -SSSTHH-------HHHSEEEEEEESCGGGSCHHHHHHHHHHHHHHSCSEEEEEEEE
T ss_pred             -cccccc-------cccceeEEEEEeeeEecchhhhHHHHHHHHHhcCCCcEEEEEE
Confidence             111100       12468998874331        246678889999999977553

>d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase
species: Arthrobacter, strain 1c [TaxId: 1663]

Probab=96.23  E-value=0.039  Score=42.59  Aligned_cols=92  Identities=18%  Similarity=0.126  Sum_probs=60.6

Q ss_pred             CEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEE--------ecCCCcccHHHHHHHHHHHcCCC
Q 017916          183 TNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIV--------KVSTNLQDIAEEVEKIQKAMGTG  254 (364)
Q Consensus       183 ~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~--------~~~~~~~~~~~~i~~~~~~~~~~  254 (364)
                      .+|.|.|+|.+|++.+..+...|. .|.+.++++++.+.+++.+.....        .......+..+.+        ..
T Consensus         2 k~iaIiGaG~~G~~~A~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~--------~~   72 (184)
T d1bg6a2           2 KTYAVLGLGNGGHAFAAYLALKGQ-SVLAWDIDAQRIKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGLAV--------KD   72 (184)
T ss_dssp             CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHHTSEEEESSSCCEEECCSEEESCHHHHH--------TT
T ss_pred             CEEEEECccHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHcCCCchhhhhhhhhhhhhhhhhhhHhHh--------cC
Confidence            589999999999999999999999 688888999988888776532110        0000012222221        46


Q ss_pred             ccEEEECCCCH---HHHHHHHHhcccCCEEEE
Q 017916          255 IDVSFDCAGFN---KTMSTALSATRAGGKVCL  283 (364)
Q Consensus       255 ~d~vid~~g~~---~~~~~~~~~l~~~G~~v~  283 (364)
                      .|++|-++...   +.+.++..++.++-.++.
T Consensus        73 aD~iii~v~~~~~~~~~~~i~~~l~~~~~iv~  104 (184)
T d1bg6a2          73 ADVILIVVPAIHHASIAANIASYISEGQLIIL  104 (184)
T ss_dssp             CSEEEECSCGGGHHHHHHHHGGGCCTTCEEEE
T ss_pred             CCEEEEEEchhHHHHHHHHhhhccCCCCEEEE
Confidence            89999998854   333444555565555543

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=96.22  E-value=0.0013  Score=54.08  Aligned_cols=76  Identities=18%  Similarity=0.213  Sum_probs=50.6

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecC-CCcccHHHHHHHHHHHcCCCccEE
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVS-TNLQDIAEEVEKIQKAMGTGIDVS  258 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~-~~~~~~~~~i~~~~~~~~~~~d~v  258 (364)
                      .|.++||+|+ +++|.+.++.+...|+ .|+.++++.++.+.+      ..+..+ ...++..+.++...+.. +++|++
T Consensus         6 ~gK~~lITGas~GIG~aia~~la~~Ga-~V~~~~r~~~~~~~~------~~~~~Dv~~~~~v~~~~~~~~~~~-g~iDiL   77 (237)
T d1uzma1           6 VSRSVLVTGGNRGIGLAIAQRLAADGH-KVAVTHRGSGAPKGL------FGVEVDVTDSDAVDRAFTAVEEHQ-GPVEVL   77 (237)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSSCCCTTS------EEEECCTTCHHHHHHHHHHHHHHH-SSCSEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCcchhcCc------eEEEEecCCHHHHHHHHHHHHHhc-CCceEE
Confidence            6789999998 9999999999999999 677777766543211      112222 22234444444444433 479999


Q ss_pred             EECCCC
Q 017916          259 FDCAGF  264 (364)
Q Consensus       259 id~~g~  264 (364)
                      ++++|.
T Consensus        78 VnnAG~   83 (237)
T d1uzma1          78 VSNAGL   83 (237)
T ss_dssp             EEECSC
T ss_pred             Eeeecc
Confidence            998874

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=96.17  E-value=0.019  Score=47.28  Aligned_cols=82  Identities=17%  Similarity=0.212  Sum_probs=54.4

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHH----HHcCCCe-EEecC-CCcccHHHHHHHHHHHcCC
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA----KELGADN-IVKVS-TNLQDIAEEVEKIQKAMGT  253 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~----~~lg~~~-~~~~~-~~~~~~~~~i~~~~~~~~~  253 (364)
                      ++..+||+|+ +++|.+.++.+...|+ .|+.+++++++.+.+    ++.|... .+..| ...+++.+.+++..+. -+
T Consensus         9 enKvalITGas~GIG~a~a~~la~~Ga-~V~~~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~-~g   86 (251)
T d2c07a1           9 ENKVALVTGAGRGIGREIAKMLAKSVS-HVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTE-HK   86 (251)
T ss_dssp             SSCEEEEESTTSHHHHHHHHHHTTTSS-EEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHH-CS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHh-cC
Confidence            4678899998 9999999998889999 678888887765433    3344432 22222 2234444445444433 35


Q ss_pred             CccEEEECCCC
Q 017916          254 GIDVSFDCAGF  264 (364)
Q Consensus       254 ~~d~vid~~g~  264 (364)
                      ++|++|+++|.
T Consensus        87 ~iDilvnnag~   97 (251)
T d2c07a1          87 NVDILVNNAGI   97 (251)
T ss_dssp             CCCEEEECCCC
T ss_pred             Cceeeeecccc
Confidence            89999998874

>d1l3ia_ c.66.1.22 (A:) Precorrin-6Y methyltransferase (CbiT) {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Precorrin-6Y methyltransferase (CbiT)
domain: Precorrin-6Y methyltransferase (CbiT)
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=96.15  E-value=0.014  Score=45.58  Aligned_cols=99  Identities=19%  Similarity=0.243  Sum_probs=65.1

Q ss_pred             HHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHH----HcCCC-eEEecCCCcccHHHHHHHHHH
Q 017916          175 RRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAK----ELGAD-NIVKVSTNLQDIAEEVEKIQK  249 (364)
Q Consensus       175 ~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~----~lg~~-~~~~~~~~~~~~~~~i~~~~~  249 (364)
                      ...++++|++||=.|+|. |..++.+|+. +. .|++++.+++..+.++    .+|.. .+..+.   .+..+..     
T Consensus        27 ~~l~~~~g~~VLDiGcGs-G~~s~~lA~~-~~-~V~avD~~~~~l~~a~~n~~~~gl~~~v~~~~---gda~~~~-----   95 (186)
T d1l3ia_          27 CLAEPGKNDVAVDVGCGT-GGVTLELAGR-VR-RVYAIDRNPEAISTTEMNLQRHGLGDNVTLME---GDAPEAL-----   95 (186)
T ss_dssp             HHHCCCTTCEEEEESCTT-SHHHHHHHTT-SS-EEEEEESCHHHHHHHHHHHHHTTCCTTEEEEE---SCHHHHH-----
T ss_pred             HhcCCCCCCEEEEEECCe-Eccccccccc-ce-EEEEecCCHHHHHHHHHHHHHcCCCcceEEEE---Cchhhcc-----
Confidence            557889999999998644 4455666654 33 7999999988776665    35653 322211   2322221     


Q ss_pred             HcCCCccEEEECCCC---HHHHHHHHHhcccCCEEEEE
Q 017916          250 AMGTGIDVSFDCAGF---NKTMSTALSATRAGGKVCLV  284 (364)
Q Consensus       250 ~~~~~~d~vid~~g~---~~~~~~~~~~l~~~G~~v~~  284 (364)
                      .....+|.++.....   .+.++.+.+.|+|+|+++..
T Consensus        96 ~~~~~~D~v~~~~~~~~~~~~~~~~~~~LkpgG~lvi~  133 (186)
T d1l3ia_          96 CKIPDIDIAVVGGSGGELQEILRIIKDKLKPGGRIIVT  133 (186)
T ss_dssp             TTSCCEEEEEESCCTTCHHHHHHHHHHTEEEEEEEEEE
T ss_pred             cccCCcCEEEEeCccccchHHHHHHHHHhCcCCEEEEE
Confidence            123579998865332   46778889999999998865

>d1g8aa_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=96.15  E-value=0.0078  Score=48.87  Aligned_cols=103  Identities=16%  Similarity=0.142  Sum_probs=68.5

Q ss_pred             HHHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCC-EEEEEecChhHHHHHHHc----CCCeEEecCCCcccHHHHHHHHH
Q 017916          174 CRRANIGPETNVLIMGAGPIGLVTMLGARAFGAP-RIVIVDVDDYRLSVAKEL----GADNIVKVSTNLQDIAEEVEKIQ  248 (364)
Q Consensus       174 l~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~-~vv~~~~~~~~~~~~~~l----g~~~~~~~~~~~~~~~~~i~~~~  248 (364)
                      ++...++||++||=.|+|. |..+..+|+..|.+ .|++++.+++..+.+++.    +-...+..+....+.      +.
T Consensus        66 l~~l~i~pG~~VLDlGaGs-G~~t~~la~~VG~~G~V~aVD~s~~~l~~a~~~a~~~~~~~~i~~d~~~~~~------~~  138 (227)
T d1g8aa_          66 LKNFPIKPGKSVLYLGIAS-GTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEERRNIVPILGDATKPEE------YR  138 (227)
T ss_dssp             CCCCCCCTTCEEEEETTTS-TTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSCTTEEEEECCTTCGGG------GT
T ss_pred             ccccccCCCCEEEEeccCC-CHHHHHHHHHhCCCCEEEEEeCcHHHHHHHHHHHHhcCCceEEEEECCCccc------cc
Confidence            3557899999999999866 78899999988643 799999999887766543    211222222211110      10


Q ss_pred             HHcCCCccEEEECCCC----HHHHHHHHHhcccCCEEEEE
Q 017916          249 KAMGTGIDVSFDCAGF----NKTMSTALSATRAGGKVCLV  284 (364)
Q Consensus       249 ~~~~~~~d~vid~~g~----~~~~~~~~~~l~~~G~~v~~  284 (364)
                       .....+|+++..+..    ...+.++.+.|+++|+++..
T Consensus       139 -~~~~~vD~i~~d~~~~~~~~~~l~~~~~~LkpgG~lvi~  177 (227)
T d1g8aa_         139 -ALVPKVDVIFEDVAQPTQAKILIDNAEVYLKRGGYGMIA  177 (227)
T ss_dssp             -TTCCCEEEEEECCCSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             -ccccceEEEEEEccccchHHHHHHHHHHhcccCCeEEEE
Confidence             013468888754432    23577888999999998865

>d1zx0a1 c.66.1.16 (A:8-236) Guanidinoacetate methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Guanidinoacetate methyltransferase
domain: Guanidinoacetate methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.14  E-value=0.0015  Score=53.51  Aligned_cols=98  Identities=13%  Similarity=0.113  Sum_probs=63.2

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCC---eEEecCCCcccHHHHHHHHHHHcCCCcc
Q 017916          180 GPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGAD---NIVKVSTNLQDIAEEVEKIQKAMGTGID  256 (364)
Q Consensus       180 ~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~---~~~~~~~~~~~~~~~i~~~~~~~~~~~d  256 (364)
                      .+|.+||-.|+|. |..+..+++..+. .+++++.++...+.+++....   .+..+.   .+.......   ...+.+|
T Consensus        52 ~~g~~VLdIGcG~-G~~a~~~a~~~~~-~v~~id~s~~~~~~a~~~~~~~~~~~~~~~---~~~~~~~~~---~~~~~fD  123 (229)
T d1zx0a1          52 SKGGRVLEVGFGM-AIAASKVQEAPID-EHWIIECNDGVFQRLRDWAPRQTHKVIPLK---GLWEDVAPT---LPDGHFD  123 (229)
T ss_dssp             TTCEEEEEECCTT-SHHHHHHHTSCEE-EEEEEECCHHHHHHHHHHGGGCSSEEEEEE---SCHHHHGGG---SCTTCEE
T ss_pred             cCCCeEEEeeccc-hHHHHHHHHcCCC-eEEEeCCCHHHHHHHHHHhhhccccccccc---ccccccccc---ccccccc
Confidence            6789999998755 6778888876655 689999999988888764321   111111   121111111   1135788


Q ss_pred             EEE-ECCCC----------HHHHHHHHHhcccCCEEEEEc
Q 017916          257 VSF-DCAGF----------NKTMSTALSATRAGGKVCLVG  285 (364)
Q Consensus       257 ~vi-d~~g~----------~~~~~~~~~~l~~~G~~v~~g  285 (364)
                      .++ |++..          ...+..+.++|+|||+++.+.
T Consensus       124 ~i~fD~~~~~~~~~~~~~~~~~~~~~~r~LkpGG~~~~~~  163 (229)
T d1zx0a1         124 GILYDTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYCN  163 (229)
T ss_dssp             EEEECCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEECC
T ss_pred             ceeecccccccccccccCHHHHHHHHHHHcCCCcEEEEEe
Confidence            874 65432          236677889999999998753

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.12  E-value=0.0038  Score=49.89  Aligned_cols=95  Identities=25%  Similarity=0.294  Sum_probs=59.5

Q ss_pred             CCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcCCCccEEEE
Q 017916          182 ETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  260 (364)
Q Consensus       182 g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid  260 (364)
                      ..+|+|+|| |.+|...+..+...|. .|.++.++.++.......++. ++.-+-  .+.. .+.+..    .+.|+||.
T Consensus         3 ~kkIlV~GatG~iG~~v~~~Ll~~g~-~V~~~~R~~~~~~~~~~~~~~-~~~gD~--~d~~-~l~~al----~~~d~vi~   73 (205)
T d1hdoa_           3 VKKIAIFGATGQTGLTTLAQAVQAGY-EVTVLVRDSSRLPSEGPRPAH-VVVGDV--LQAA-DVDKTV----AGQDAVIV   73 (205)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCGGGSCSSSCCCSE-EEESCT--TSHH-HHHHHH----TTCSEEEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCcC-EEEEEEcChhhcccccccccc-cccccc--cchh-hHHHHh----cCCCEEEE
Confidence            468999998 9999999998888898 577777777775433333333 222222  2322 232222    46899999


Q ss_pred             CCCCH----------HHHHHHHHhcccC--CEEEEEc
Q 017916          261 CAGFN----------KTMSTALSATRAG--GKVCLVG  285 (364)
Q Consensus       261 ~~g~~----------~~~~~~~~~l~~~--G~~v~~g  285 (364)
                      ++|..          +....+++.++..  .+++.++
T Consensus        74 ~~g~~~~~~~~~~~~~~~~~l~~aa~~~~v~r~i~~s  110 (205)
T d1hdoa_          74 LLGTRNDLSPTTVMSEGARNIVAAMKAHGVDKVVACT  110 (205)
T ss_dssp             CCCCTTCCSCCCHHHHHHHHHHHHHHHHTCCEEEEEC
T ss_pred             EeccCCchhhhhhhHHHHHHHHHHHHhcCCCeEEEEe
Confidence            98742          2233455555544  4777765

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=96.11  E-value=0.012  Score=48.84  Aligned_cols=82  Identities=22%  Similarity=0.220  Sum_probs=53.5

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHH----HHcCCC----eEEecCC-CcccHHHHHHHHHHH
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA----KELGAD----NIVKVST-NLQDIAEEVEKIQKA  250 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~----~~lg~~----~~~~~~~-~~~~~~~~i~~~~~~  250 (364)
                      +|..+||+|+ +++|.+.++.+...|+ .|+.++++.++.+.+    ++.+..    ..+..|- ..++..+.++.....
T Consensus         4 ~gKvalVTGas~GIG~aia~~la~~Ga-~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~   82 (264)
T d1spxa_           4 AEKVAIITGSSNGIGRATAVLFAREGA-KVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLGK   82 (264)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCcCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCcCceEEEEccCCCHHHHHHHHHHHHHH
Confidence            5788999998 9999999999999999 578888887765443    233321    1222222 223444444444433


Q ss_pred             cCCCccEEEECCCC
Q 017916          251 MGTGIDVSFDCAGF  264 (364)
Q Consensus       251 ~~~~~d~vid~~g~  264 (364)
                      . +++|++++++|.
T Consensus        83 ~-g~iDilvnnAG~   95 (264)
T d1spxa_          83 F-GKLDILVNNAGA   95 (264)
T ss_dssp             H-SCCCEEEECCC-
T ss_pred             h-CCCCEeeccccc
Confidence            3 579999999873

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=96.09  E-value=0.0022  Score=53.27  Aligned_cols=77  Identities=16%  Similarity=0.097  Sum_probs=51.4

Q ss_pred             EEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCe-EEecCCCcccHHHHHHHHHHHcCCCccEEEEC
Q 017916          184 NVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADN-IVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDC  261 (364)
Q Consensus       184 ~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid~  261 (364)
                      ++||+|+ +++|.+.+..+...|+ .|+.++++.++.+.++.++... ..|. ...++..+.+++..+.. +++|++|++
T Consensus         2 TAlVTGas~GiG~aiA~~la~~Ga-~V~i~~r~~~~~~~~~~~~~~~~~~dv-~~~~~~~~~~~~~~~~~-G~iDiLVnN   78 (252)
T d1zmta1           2 TAIVTNVKHFGGMGSALRLSEAGH-TVACHDESFKQKDELEAFAETYPQLKP-MSEQEPAELIEAVTSAY-GQVDVLVSN   78 (252)
T ss_dssp             EEEESSTTSTTHHHHHHHHHHTTC-EEEECCGGGGSHHHHHHHHHHCTTSEE-CCCCSHHHHHHHHHHHH-SCCCEEEEE
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHhhhCcEEEecc-CCHHHHHHHHHHHHHHc-CCCCEEEEC
Confidence            7899998 8999999999999999 6777777777666555432110 1111 22355555555555443 479999987


Q ss_pred             CC
Q 017916          262 AG  263 (364)
Q Consensus       262 ~g  263 (364)
                      +|
T Consensus        79 Ag   80 (252)
T d1zmta1          79 DI   80 (252)
T ss_dssp             CC
T ss_pred             Cc
Confidence            65

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

Probab=96.04  E-value=0.05  Score=44.27  Aligned_cols=101  Identities=18%  Similarity=0.191  Sum_probs=63.4

Q ss_pred             EEEEEcC-CHHHHHHHHHHHHCCCC------EEEEEecChhHHHHH-H---HcCCCe-EEecC-CCcccHHHHHHHHHHH
Q 017916          184 NVLIMGA-GPIGLVTMLGARAFGAP------RIVIVDVDDYRLSVA-K---ELGADN-IVKVS-TNLQDIAEEVEKIQKA  250 (364)
Q Consensus       184 ~VLI~Ga-g~~G~~ai~la~~~g~~------~vv~~~~~~~~~~~~-~---~lg~~~-~~~~~-~~~~~~~~~i~~~~~~  250 (364)
                      .|||+|+ +++|.+.+..+...|++      .++.++++.++.+.+ +   +.|... .+..| ...++..+.++...+.
T Consensus         3 VvlITGas~GIG~aia~~la~~G~~~~~~~~~v~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~   82 (240)
T d2bd0a1           3 ILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHIVER   82 (240)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             EEEEccCCCHHHHHHHHHHHHhCccccccCcEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence            4688998 99999999888888886      377777777765543 2   234322 22222 2224444444444433


Q ss_pred             cCCCccEEEECCCCH-------------------------HHHHHHHHhcc--cCCEEEEEc
Q 017916          251 MGTGIDVSFDCAGFN-------------------------KTMSTALSATR--AGGKVCLVG  285 (364)
Q Consensus       251 ~~~~~d~vid~~g~~-------------------------~~~~~~~~~l~--~~G~~v~~g  285 (364)
                       -+++|++++++|..                         ...+.++..|.  .+|+++.++
T Consensus        83 -~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~is  143 (240)
T d2bd0a1          83 -YGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFIT  143 (240)
T ss_dssp             -TSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEC
T ss_pred             -cCCcceeecccccccCCccccCCHHHHhhcCCEeehHHHHHHHHHhHHHHhcCCCceEEEe
Confidence             35799999998742                         13344555663  468998886

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

Probab=95.98  E-value=0.034  Score=45.78  Aligned_cols=79  Identities=28%  Similarity=0.352  Sum_probs=51.6

Q ss_pred             EEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHH----HHcCCCe-EEecCC-CcccHHHHHHHHHHHcCCCcc
Q 017916          184 NVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA----KELGADN-IVKVST-NLQDIAEEVEKIQKAMGTGID  256 (364)
Q Consensus       184 ~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~----~~lg~~~-~~~~~~-~~~~~~~~i~~~~~~~~~~~d  256 (364)
                      .+||+|+ +++|.+.+..+...|+ .|+.+++++++.+.+    ++.|... .+..|- ..++..+.++...+. -+++|
T Consensus         3 ValITGas~GIG~aia~~la~~Ga-~V~~~~r~~~~l~~~~~~i~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~-~g~iD   80 (255)
T d1gega_           3 VALVTGAGQGIGKAIALRLVKDGF-AVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKT-LGGFD   80 (255)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHH-TTCCC
T ss_pred             EEEEcCCccHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHH-hCCcc
Confidence            4589998 9999999999988999 677888888775433    3445432 222222 233444444444433 35799


Q ss_pred             EEEECCCC
Q 017916          257 VSFDCAGF  264 (364)
Q Consensus       257 ~vid~~g~  264 (364)
                      ++++++|.
T Consensus        81 ilVnnAG~   88 (255)
T d1gega_          81 VIVNNAGV   88 (255)
T ss_dssp             EEEECCCC
T ss_pred             EEEecccc
Confidence            99999874

>d1g8sa_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=95.92  E-value=0.019  Score=46.55  Aligned_cols=103  Identities=12%  Similarity=0.062  Sum_probs=66.7

Q ss_pred             HHHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcC----CCeEEecCCCcccHHHHHHHHHH
Q 017916          174 CRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELG----ADNIVKVSTNLQDIAEEVEKIQK  249 (364)
Q Consensus       174 l~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg----~~~~~~~~~~~~~~~~~i~~~~~  249 (364)
                      ++...++||++||=.|+|. |..+..+|+......|++++.+++..+.++++-    -...+..+......      .. 
T Consensus        67 l~~l~ikpG~~VLDlGcGs-G~~~~~la~~~~~g~V~aVDiS~~~i~~a~~~a~~~~ni~~i~~d~~~~~~------~~-  138 (230)
T d1g8sa_          67 LKVMPIKRDSKILYLGASA-GTTPSHVADIADKGIVYAIEYAPRIMRELLDACAERENIIPILGDANKPQE------YA-  138 (230)
T ss_dssp             CCCCCCCTTCEEEEESCCS-SHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTTCTTEEEEECCTTCGGG------GT-
T ss_pred             HHhCCCCCCCEEEEeCEEc-CHHHHHHHHhCCCCEEEEEeCcHHHHHHHHHHHhhhcccceEEEeeccCcc------cc-
Confidence            3557789999999999865 778888888765558999999998887776542    11222222211110      10 


Q ss_pred             HcCCCccEEEECCCC----HHHHHHHHHhcccCCEEEEE
Q 017916          250 AMGTGIDVSFDCAGF----NKTMSTALSATRAGGKVCLV  284 (364)
Q Consensus       250 ~~~~~~d~vid~~g~----~~~~~~~~~~l~~~G~~v~~  284 (364)
                      .....+|+++.....    ...+.++.+.|+|+|+++..
T Consensus       139 ~~~~~v~~i~~~~~~~~~~~~~l~~~~r~LKpgG~~~i~  177 (230)
T d1g8sa_         139 NIVEKVDVIYEDVAQPNQAEILIKNAKWFLKKGGYGMIA  177 (230)
T ss_dssp             TTCCCEEEEEECCCSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             cccceeEEeeccccchHHHHHHHHHHHHhcccCceEEEE
Confidence            012346666664432    23467788899999998865

>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn Mja218
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=95.86  E-value=0.1  Score=37.80  Aligned_cols=74  Identities=22%  Similarity=0.279  Sum_probs=52.7

Q ss_pred             EEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHH-HcCCCeEEecCCCcccHHHHHHHHHHHcCCCccEEEECC
Q 017916          184 NVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAK-ELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCA  262 (364)
Q Consensus       184 ~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~-~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid~~  262 (364)
                      +|+|.|.|.+|...++.+...|. .|++++.++++.+.++ +++.. ++.-+..+.+   .++   +..-...|.++.++
T Consensus         2 ~IvI~G~G~~G~~la~~L~~~g~-~v~vid~d~~~~~~~~~~~~~~-vi~Gd~~~~~---~l~---~~~i~~a~~vv~~t   73 (132)
T d1lssa_           2 YIIIAGIGRVGYTLAKSLSEKGH-DIVLIDIDKDICKKASAEIDAL-VINGDCTKIK---TLE---DAGIEDADMYIAVT   73 (132)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHCSSE-EEESCTTSHH---HHH---HTTTTTCSEEEECC
T ss_pred             EEEEECCCHHHHHHHHHHHHCCC-CcceecCChhhhhhhhhhhhhh-hccCcccchh---hhh---hcChhhhhhhcccC
Confidence            68999999999999999999998 6899999999887765 45654 3322222222   222   22235789999988


Q ss_pred             CCH
Q 017916          263 GFN  265 (364)
Q Consensus       263 g~~  265 (364)
                      .+.
T Consensus        74 ~~d   76 (132)
T d1lssa_          74 GKE   76 (132)
T ss_dssp             SCH
T ss_pred             CcH
Confidence            864

>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Saccharopine reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=95.84  E-value=0.05  Score=41.58  Aligned_cols=96  Identities=11%  Similarity=0.070  Sum_probs=62.9

Q ss_pred             CCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHH-cCCCeEEecCCCcccHHHHHHHHHHHcCCCccEEEE
Q 017916          182 ETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKE-LGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  260 (364)
Q Consensus       182 g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~-lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid  260 (364)
                      +.+|||.|+|.+|..+++.+...|. .|++++++.++.+.+.+ ++...... ...  +.........    ...|.++.
T Consensus         2 ~K~IliiGaG~~G~~~a~~L~~~g~-~V~v~dr~~~~a~~l~~~~~~~~~~~-~~~--~~~~~~~~~i----~~~~~~i~   73 (182)
T d1e5qa1           2 TKSVLMLGSGFVTRPTLDVLTDSGI-KVTVACRTLESAKKLSAGVQHSTPIS-LDV--NDDAALDAEV----AKHDLVIS   73 (182)
T ss_dssp             CCEEEEECCSTTHHHHHHHHHTTTC-EEEEEESCHHHHHHHHTTCTTEEEEE-CCT--TCHHHHHHHH----TTSSEEEE
T ss_pred             CCEEEEECCCHHHHHHHHHHHhCCC-EEEEEECChHHHHHHHhccccccccc-ccc--cchhhhHhhh----hccceeEe
Confidence            5789999999999999999988899 68999999988876654 44333222 121  1122222222    35788888


Q ss_pred             CCCCHHHHHHHHHhcccCCEEEEEc
Q 017916          261 CAGFNKTMSTALSATRAGGKVCLVG  285 (364)
Q Consensus       261 ~~g~~~~~~~~~~~l~~~G~~v~~g  285 (364)
                      +............++..+-.++...
T Consensus        74 ~~~~~~~~~~~~~~~~~~~~~~~~~   98 (182)
T d1e5qa1          74 LIPYTFHATVIKSAIRQKKHVVTTS   98 (182)
T ss_dssp             CSCGGGHHHHHHHHHHHTCEEECSS
T ss_pred             eccchhhhHHHHHHHhhccceeecc
Confidence            7775555555556666666666553

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

Probab=95.78  E-value=0.031  Score=46.44  Aligned_cols=82  Identities=13%  Similarity=0.176  Sum_probs=50.8

Q ss_pred             CCCEEEEEcC-C--HHHHHHHHHHHHCCCCEEEEEecChhHHHHH----HHcCCCeEEecCC-CcccHHHHHHHHHHHcC
Q 017916          181 PETNVLIMGA-G--PIGLVTMLGARAFGAPRIVIVDVDDYRLSVA----KELGADNIVKVST-NLQDIAEEVEKIQKAMG  252 (364)
Q Consensus       181 ~g~~VLI~Ga-g--~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~----~~lg~~~~~~~~~-~~~~~~~~i~~~~~~~~  252 (364)
                      +|.++||+|+ |  ++|.+.++.+...|+ .|+.++++++..+.+    .+.+...+...+- ...+..+.+.+.... -
T Consensus         4 ~gK~alITGaag~~GIG~AiA~~la~~Ga-~V~i~~r~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~-~   81 (274)
T d2pd4a1           4 KGKKGLIVGVANNKSIAYGIAQSCFNQGA-TLAFTYLNESLEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKD-L   81 (274)
T ss_dssp             TTCEEEEECCCSTTSHHHHHHHHHHTTTC-EEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHH-T
T ss_pred             CCCEEEEECCCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhhCCceeEeeecccchhhHHHHHHHHHHH-c
Confidence            5899999986 5  699999999999999 567776665332222    2333333333222 223333344443332 4


Q ss_pred             CCccEEEECCCC
Q 017916          253 TGIDVSFDCAGF  264 (364)
Q Consensus       253 ~~~d~vid~~g~  264 (364)
                      +++|+++.+.|.
T Consensus        82 g~id~lV~nag~   93 (274)
T d2pd4a1          82 GSLDFIVHSVAF   93 (274)
T ss_dssp             SCEEEEEECCCC
T ss_pred             CCCCeEEeeccc
Confidence            579999988874

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

Probab=95.74  E-value=0.029  Score=46.35  Aligned_cols=82  Identities=21%  Similarity=0.276  Sum_probs=52.1

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecCh-hHHHHH-----HHcCCCeE-EecC-CCcccHHHHHHHHHHHc
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDD-YRLSVA-----KELGADNI-VKVS-TNLQDIAEEVEKIQKAM  251 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~-~~~~~~-----~~lg~~~~-~~~~-~~~~~~~~~i~~~~~~~  251 (364)
                      +|.++||+|+ +++|.+.++.+...|+ .|+.+++++ ++.+.+     ...|.... +..| ...++..+.++...+..
T Consensus         3 ~gK~alITGas~GIG~aiA~~la~~Ga-~V~~~~r~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~   81 (260)
T d1x1ta1           3 KGKVAVVTGSTSGIGLGIATALAAQGA-DIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQM   81 (260)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHH
T ss_pred             CcCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCcHHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHh
Confidence            5789999998 9999999999999999 577776653 333322     23344322 1122 22344444444444433


Q ss_pred             CCCccEEEECCCC
Q 017916          252 GTGIDVSFDCAGF  264 (364)
Q Consensus       252 ~~~~d~vid~~g~  264 (364)
                       +++|++|+++|.
T Consensus        82 -G~iDiLVnnAG~   93 (260)
T d1x1ta1          82 -GRIDILVNNAGI   93 (260)
T ss_dssp             -SCCSEEEECCCC
T ss_pred             -CCCcEEEeeccc
Confidence             479999999874

>d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Putative shikimate dehydrogenase YdiB
species: Escherichia coli [TaxId: 562]

Probab=95.74  E-value=0.025  Score=43.97  Aligned_cols=125  Identities=14%  Similarity=0.133  Sum_probs=70.3

Q ss_pred             HHHHcCC-CCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHH----HHHcC----CC-eEEecCCCcccHHH
Q 017916          173 ACRRANI-GPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSV----AKELG----AD-NIVKVSTNLQDIAE  242 (364)
Q Consensus       173 ~l~~~~~-~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~----~~~lg----~~-~~~~~~~~~~~~~~  242 (364)
                      +++..+. -.+.+|||.|+|+++.+++..+...|++.++.+.+++++.+.    +++++    .. ...++.    +..+
T Consensus         8 ~l~~~~~~l~~k~vlIlGaGGaarai~~al~~~g~~~i~i~nR~~~~~~~~~~l~~~~~~~~~~~~~~~~~~----~~~~   83 (182)
T d1vi2a1           8 AIKESGFDIKGKTMVLLGAGGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDLA----DQQA   83 (182)
T ss_dssp             HHHHTTCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETT----CHHH
T ss_pred             HHHHcCCCcCCCEEEEECCcHHHHHHHHHHhhcCCceEeeeccchHHHHHHHHHHHHHHhhcCcceEeeecc----cccc
Confidence            3444333 367899999999999999998899999988888887665432    33332    11 122221    2121


Q ss_pred             HHHHHHHHcCCCccEEEECCCCH------HHHHHHHHhcccCCEEEEEcCCCCCccccchhhhhcCcEEEe
Q 017916          243 EVEKIQKAMGTGIDVSFDCAGFN------KTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAVREVDVVG  307 (364)
Q Consensus       243 ~i~~~~~~~~~~~d~vid~~g~~------~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~  307 (364)
                       +...    -..+|++|+|+..+      +.+..-+..++++..++++-..... +..+..+-.++.+.+.
T Consensus        84 -~~~~----~~~~diiIN~Tp~G~~~~~~~~~~~~~~~~~~~~~v~Di~Y~p~~-T~ll~~a~~~g~~~i~  148 (182)
T d1vi2a1          84 -FAEA----LASADILTNGTKVGMKPLENESLVNDISLLHPGLLVTECVYNPHM-TKLLQQAQQAGCKTID  148 (182)
T ss_dssp             -HHHH----HHTCSEEEECSSTTSTTSCSCCSCCCGGGSCTTCEEEECCCSSSS-CHHHHHHHTTTCEEEC
T ss_pred             -hhhh----hcccceeccccCCccccccchhhhhHHHhhhcchhhHHhhcCccc-cHHHHHHHHCcCeEec
Confidence             1111    13689999997521      0000113456677777776433222 3333444445555443

>d1ve3a1 c.66.1.43 (A:2-227) Hypothetical protein PH0226 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical protein PH0226
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=95.53  E-value=0.046  Score=43.55  Aligned_cols=94  Identities=15%  Similarity=0.162  Sum_probs=61.8

Q ss_pred             CCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHH----cCCCe-EEecCCCcccHHHHHHHHHHHcC
Q 017916          178 NIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKE----LGADN-IVKVSTNLQDIAEEVEKIQKAMG  252 (364)
Q Consensus       178 ~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~----lg~~~-~~~~~~~~~~~~~~i~~~~~~~~  252 (364)
                      .++++++||-.|+|. |..+..+++. |. .+++++.+++..+.+++    .+... .+..+.  .++.        ...
T Consensus        34 ~l~~~~~ILDiGcG~-G~~~~~la~~-~~-~v~giD~S~~~i~~ak~~~~~~~~~~~~~~~d~--~~l~--------~~~  100 (226)
T d1ve3a1          34 YMKKRGKVLDLACGV-GGFSFLLEDY-GF-EVVGVDISEDMIRKAREYAKSRESNVEFIVGDA--RKLS--------FED  100 (226)
T ss_dssp             SCCSCCEEEEETCTT-SHHHHHHHHT-TC-EEEEEESCHHHHHHHHHHHHHTTCCCEEEECCT--TSCC--------SCT
T ss_pred             hcCCCCEEEEECCCc-chhhhhHhhh-hc-ccccccccccchhhhhhhhcccccccccccccc--cccc--------ccC
Confidence            457889999999866 6777888874 77 79999999988877654    33322 221111  1110        013


Q ss_pred             CCccEEEECCC-----CH---HHHHHHHHhcccCCEEEEE
Q 017916          253 TGIDVSFDCAG-----FN---KTMSTALSATRAGGKVCLV  284 (364)
Q Consensus       253 ~~~d~vid~~g-----~~---~~~~~~~~~l~~~G~~v~~  284 (364)
                      ..+|+|+....     ..   ..+..+.++|+|||+++..
T Consensus       101 ~~fD~I~~~~~l~~~~~~d~~~~l~~i~~~LkpgG~lii~  140 (226)
T d1ve3a1         101 KTFDYVIFIDSIVHFEPLELNQVFKEVRRVLKPSGKFIMY  140 (226)
T ss_dssp             TCEEEEEEESCGGGCCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             cCceEEEEecchhhCChhHHHHHHHHHHHHcCcCcEEEEE
Confidence            57999886332     11   3577899999999998754

>d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=95.46  E-value=0.07  Score=40.43  Aligned_cols=86  Identities=17%  Similarity=0.139  Sum_probs=58.4

Q ss_pred             EEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCC-eEEecCCCcccHHHHHHHHHHHcCCCccEEEECC
Q 017916          184 NVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGAD-NIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCA  262 (364)
Q Consensus       184 ~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid~~  262 (364)
                      +|.|.|.|.+|...+..++..|. .|++.++++++.+.+++++.. ...+   .. +      .     -...|+||-|+
T Consensus         2 kI~iIG~G~mG~~lA~~l~~~g~-~V~~~d~~~~~~~~a~~~~~~~~~~~---~~-~------~-----~~~~DiIilav   65 (165)
T d2f1ka2           2 KIGVVGLGLIGASLAGDLRRRGH-YLIGVSRQQSTCEKAVERQLVDEAGQ---DL-S------L-----LQTAKIIFLCT   65 (165)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTSCSEEES---CG-G------G-----GTTCSEEEECS
T ss_pred             EEEEEeecHHHHHHHHHHHHCCC-EEEEEECCchHHHHHHHhhccceeee---ec-c------c-----ccccccccccC
Confidence            68899999999988888888998 688889999999988888853 3221   10 1      0     14689999888


Q ss_pred             CCH---HHHHHHHHhcccCCEEEEEc
Q 017916          263 GFN---KTMSTALSATRAGGKVCLVG  285 (364)
Q Consensus       263 g~~---~~~~~~~~~l~~~G~~v~~g  285 (364)
                      -..   +.++++...+.++..++..+
T Consensus        66 p~~~~~~vl~~l~~~l~~~~iv~~~~   91 (165)
T d2f1ka2          66 PIQLILPTLEKLIPHLSPTAIVTDVA   91 (165)
T ss_dssp             CHHHHHHHHHHHGGGSCTTCEEEECC
T ss_pred             cHhhhhhhhhhhhhhcccccceeecc
Confidence            632   23333444445555555553

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=95.34  E-value=0.055  Score=44.44  Aligned_cols=38  Identities=26%  Similarity=0.392  Sum_probs=32.2

Q ss_pred             CCCCCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecC
Q 017916          178 NIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVD  215 (364)
Q Consensus       178 ~~~~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~  215 (364)
                      ..+|+.++||+|+ +++|.+.+..+...|+++++.+.++
T Consensus         5 ~~~p~gt~lVTGgs~GIG~a~a~~la~~Ga~~vvl~~R~   43 (259)
T d2fr1a1           5 EWKPTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRS   43 (259)
T ss_dssp             CCCCCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESS
T ss_pred             ccCCcCEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCC
Confidence            4688999999998 9999999998888899767766554

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

Probab=95.30  E-value=0.056  Score=44.32  Aligned_cols=82  Identities=15%  Similarity=0.164  Sum_probs=49.6

Q ss_pred             CCCCEEEEEcC-C--HHHHHHHHHHHHCCCCEEEEEecChhHHHHH----HHcCCCeEEecCCCc-ccHHHHHHHHHHHc
Q 017916          180 GPETNVLIMGA-G--PIGLVTMLGARAFGAPRIVIVDVDDYRLSVA----KELGADNIVKVSTNL-QDIAEEVEKIQKAM  251 (364)
Q Consensus       180 ~~g~~VLI~Ga-g--~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~----~~lg~~~~~~~~~~~-~~~~~~i~~~~~~~  251 (364)
                      -+|.++||+|+ +  ++|.+.+..+...|++ |+.+.++++..+.+    ...+.......+... .+..+..... ...
T Consensus         3 L~gK~~lITGass~~GIG~aiA~~l~~~G~~-V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~   80 (258)
T d1qsga_           3 LSGKRILVTGVASKLSIAYGIAQAMHREGAE-LAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAEL-GKV   80 (258)
T ss_dssp             TTTCEEEECCCCSTTSHHHHHHHHHHHTTCE-EEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHH-HTT
T ss_pred             CCCCEEEEECCCCchhHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHHHhhcCCcceeecccchHHHHHHHHHHh-hhc
Confidence            36899999987 6  6889999999999995 66666766544433    334444333322222 2222222222 223


Q ss_pred             CCCccEEEECCC
Q 017916          252 GTGIDVSFDCAG  263 (364)
Q Consensus       252 ~~~~d~vid~~g  263 (364)
                      ...+|+.+++++
T Consensus        81 ~~~~d~~v~~a~   92 (258)
T d1qsga_          81 WPKFDGFVHSIG   92 (258)
T ss_dssp             CSSEEEEEECCC
T ss_pred             ccccceEEEeec
Confidence            457899998765

>d1iy9a_ c.66.1.17 (A:) Spermidine synthase {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Bacillus subtilis [TaxId: 1423]

Probab=95.29  E-value=0.036  Score=46.15  Aligned_cols=96  Identities=18%  Similarity=0.177  Sum_probs=66.5

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcC-----C--C---eEEecCCCcccHHHHHHHHHH
Q 017916          180 GPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELG-----A--D---NIVKVSTNLQDIAEEVEKIQK  249 (364)
Q Consensus       180 ~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg-----~--~---~~~~~~~~~~~~~~~i~~~~~  249 (364)
                      .+..+|||.|+|. |.++..+++..+.+.+..++-+++-.+.++++-     +  +   .++.     .|..+.+    +
T Consensus        74 ~~p~~vLiiGgG~-G~~~~~~l~~~~~~~i~~VEID~~Vi~~a~~~~~~~~~~~~d~r~~i~~-----~D~~~~l----~  143 (274)
T d1iy9a_          74 PNPEHVLVVGGGD-GGVIREILKHPSVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQV-----DDGFMHI----A  143 (274)
T ss_dssp             SSCCEEEEESCTT-CHHHHHHTTCTTCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEE-----SCSHHHH----H
T ss_pred             CCcceEEecCCCC-cHHHHHHHhcCCcceEEEecCCHHHHHHHHHhChhhcccccCCCeEEEe-----chHHHHH----h
Confidence            4558999998755 566777778778778999999998888887642     1  1   1221     2323333    3


Q ss_pred             HcCCCccEEE-ECCC---------CHHHHHHHHHhcccCCEEEEEc
Q 017916          250 AMGTGIDVSF-DCAG---------FNKTMSTALSATRAGGKVCLVG  285 (364)
Q Consensus       250 ~~~~~~d~vi-d~~g---------~~~~~~~~~~~l~~~G~~v~~g  285 (364)
                      ..+.++|+|| |...         +.+.++.+.++|+++|.++.-.
T Consensus       144 ~~~~~yDvIi~D~~~p~~~~~~L~t~eFy~~~~~~L~~~Gv~v~q~  189 (274)
T d1iy9a_         144 KSENQYDVIMVDSTEPVGPAVNLFTKGFYAGIAKALKEDGIFVAQT  189 (274)
T ss_dssp             TCCSCEEEEEESCSSCCSCCCCCSTTHHHHHHHHHEEEEEEEEEEC
T ss_pred             hcCCCCCEEEEcCCCCCCcchhhccHHHHHHHHhhcCCCceEEEec
Confidence            3467899987 4322         3577889999999999998754

>d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn bsu222
species: Bacillus subtilis [TaxId: 1423]

Probab=95.25  E-value=0.03  Score=40.98  Aligned_cols=92  Identities=12%  Similarity=0.188  Sum_probs=60.1

Q ss_pred             EEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcCCCccEEEECCC
Q 017916          184 NVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAG  263 (364)
Q Consensus       184 ~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid~~g  263 (364)
                      +++|.|.|.+|..+++.+...|. .|++++.++++.+.++..+...++ -+...++.   +++.   .-...|.+|-+++
T Consensus         2 ~~iIiG~G~~G~~la~~L~~~g~-~vvvid~d~~~~~~~~~~~~~~~~-gd~~~~~~---l~~a---~i~~a~~vi~~~~   73 (134)
T d2hmva1           2 QFAVIGLGRFGGSIVKELHRMGH-EVLAVDINEEKVNAYASYATHAVI-ANATEENE---LLSL---GIRNFEYVIVAIG   73 (134)
T ss_dssp             CEEEECCSHHHHHHHHHHHHTTC-CCEEEESCHHHHHHTTTTCSEEEE-CCTTCTTH---HHHH---TGGGCSEEEECCC
T ss_pred             EEEEECCCHHHHHHHHHHHHCCC-eEEEecCcHHHHHHHHHhCCccee-eecccchh---hhcc---CCccccEEEEEcC
Confidence            57888999999999999999999 578889999998888877754433 23333333   2222   1246888888877


Q ss_pred             CHHHHHH---HHHhcccCCEEEE
Q 017916          264 FNKTMST---ALSATRAGGKVCL  283 (364)
Q Consensus       264 ~~~~~~~---~~~~l~~~G~~v~  283 (364)
                      +.+.-..   ....+.+..+++.
T Consensus        74 ~~~~~~~~~~~~~~~~~~~~iia   96 (134)
T d2hmva1          74 ANIQASTLTTLLLKELDIPNIWV   96 (134)
T ss_dssp             SCHHHHHHHHHHHHHTTCSEEEE
T ss_pred             chHHhHHHHHHHHHHcCCCcEEe
Confidence            5432222   2233344455544

>d2bzga1 c.66.1.36 (A:17-245) Thiopurine S-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.25  E-value=0.013  Score=47.57  Aligned_cols=102  Identities=14%  Similarity=0.010  Sum_probs=65.5

Q ss_pred             cCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCC-CeEE------------ecCCC-----cc
Q 017916          177 ANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGA-DNIV------------KVSTN-----LQ  238 (364)
Q Consensus       177 ~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~-~~~~------------~~~~~-----~~  238 (364)
                      ..+.++.+||..|+|. |..+..||+ .|+ .|++++.|++..+.+++... ....            .....     ..
T Consensus        41 l~~~~~~rvLd~GCG~-G~~a~~LA~-~G~-~V~gvD~S~~ai~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  117 (229)
T d2bzga1          41 LKGKSGLRVFFPLCGK-AVEMKWFAD-RGH-SVVGVEISELGIQEFFTEQNLSYSEEPITEIPGTKVFKSSSGNISLYCC  117 (229)
T ss_dssp             HTTCCSCEEEETTCTT-CTHHHHHHH-TTC-EEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEES
T ss_pred             cCCCCCCEEEEeCCCC-cHHHHHHHh-CCC-cEEEEeCCHHHHHHHHHHhhccccccchhcccccceeeecCCcEEEEEc
Confidence            5678899999998766 677778876 699 79999999998887765321 1100            00000     00


Q ss_pred             cHHHHHHHHHHHcCCCccEEEECCCC--------HHHHHHHHHhcccCCEEEEEc
Q 017916          239 DIAEEVEKIQKAMGTGIDVSFDCAGF--------NKTMSTALSATRAGGKVCLVG  285 (364)
Q Consensus       239 ~~~~~i~~~~~~~~~~~d~vid~~g~--------~~~~~~~~~~l~~~G~~v~~g  285 (364)
                      ++    ..+.......+|+|+++..-        ...+..+.++|+|+|+++...
T Consensus       118 d~----~~l~~~~~~~fd~i~~~~~l~~~~~~~r~~~~~~~~~~LkpgG~~~l~~  168 (229)
T d2bzga1         118 SI----FDLPRTNIGKFDMIWDRGALVAINPGDRKCYADTMFSLLGKKFQYLLCV  168 (229)
T ss_dssp             CG----GGGGGSCCCCEEEEEESSSTTTSCGGGHHHHHHHHHHTEEEEEEEEEEE
T ss_pred             ch----hhccccccCceeEEEEEEEEEeccchhhHHHHHHHHhhcCCcceEEEEE
Confidence            11    11111124578999986421        346678999999999987664

>d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.21  E-value=0.13  Score=38.69  Aligned_cols=102  Identities=17%  Similarity=0.264  Sum_probs=70.5

Q ss_pred             HHHHHH-HH-cCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHH
Q 017916          169 VGLHAC-RR-ANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEK  246 (364)
Q Consensus       169 ~a~~~l-~~-~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~  246 (364)
                      +.+.++ +. ...-.|.+|+|.|-|-+|.-.++.++.+|+ +|++++..+-+.-.+.--|.. +..           +.+
T Consensus         9 S~~~~~~r~t~~~l~Gk~v~V~GyG~iG~g~A~~~rg~G~-~V~v~e~dp~~al~A~~dG~~-v~~-----------~~~   75 (163)
T d1li4a1           9 SLIDGIKRATDVMIAGKVAVVAGYGDVGKGCAQALRGFGA-RVIITEIDPINALQAAMEGYE-VTT-----------MDE   75 (163)
T ss_dssp             HHHHHHHHHHCCCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCE-ECC-----------HHH
T ss_pred             hHHHHHHHHhCceecCCEEEEeccccccHHHHHHHHhCCC-eeEeeecccchhHHhhcCceE-eee-----------hhh
Confidence            344555 33 345689999999999999999999999999 789998887554333333432 211           111


Q ss_pred             HHHHcCCCccEEEECCCCHHH-HHHHHHhcccCCEEEEEcCC
Q 017916          247 IQKAMGTGIDVSFDCAGFNKT-MSTALSATRAGGKVCLVGMG  287 (364)
Q Consensus       247 ~~~~~~~~~d~vid~~g~~~~-~~~~~~~l~~~G~~v~~g~~  287 (364)
                      .    -...|+++-++|.... -.+-++.|+++..+...|..
T Consensus        76 a----~~~adivvtaTGn~~vI~~eh~~~MKdgaIL~N~Ghf  113 (163)
T d1li4a1          76 A----CQEGNIFVTTTGCIDIILGRHFEQMKDDAIVCNIGHF  113 (163)
T ss_dssp             H----TTTCSEEEECSSCSCSBCHHHHTTCCTTEEEEECSSS
T ss_pred             h----hhhccEEEecCCCccchhHHHHHhccCCeEEEEeccc
Confidence            2    2457999999996443 34678899988877776643

>d1xj5a_ c.66.1.17 (A:) Spermidine synthase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=95.15  E-value=0.047  Score=45.81  Aligned_cols=98  Identities=22%  Similarity=0.273  Sum_probs=66.2

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcC---------CCeEEecCCCcccHHHHHHHHHHH
Q 017916          180 GPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELG---------ADNIVKVSTNLQDIAEEVEKIQKA  250 (364)
Q Consensus       180 ~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg---------~~~~~~~~~~~~~~~~~i~~~~~~  250 (364)
                      ...++|||.|+|. |.++-.+++..+.+.+..++-+++-.+.++++-         ...-+.+    .|-.+.++.   .
T Consensus        79 ~~pk~VLiiGgG~-G~~~r~~l~~~~~~~i~~VEiD~~Vi~~~~~~f~~~~~~~~~~r~~i~~----~Da~~~l~~---~  150 (290)
T d1xj5a_          79 PNPKKVLVIGGGD-GGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVI----GDGVAFLKN---A  150 (290)
T ss_dssp             SCCCEEEEETCSS-SHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEE----SCHHHHHHT---S
T ss_pred             CCCcceEEecCCc-hHHHHHHHhcccceeeEEecCCHHHHHHHHHhchhhhccccCCCcEEEE----ccHHHHHhh---c
Confidence            4557999998655 556667888878778999999998888887742         1111111    232333322   2


Q ss_pred             cCCCccEEE-ECCC---------CHHHHHHHHHhcccCCEEEEEc
Q 017916          251 MGTGIDVSF-DCAG---------FNKTMSTALSATRAGGKVCLVG  285 (364)
Q Consensus       251 ~~~~~d~vi-d~~g---------~~~~~~~~~~~l~~~G~~v~~g  285 (364)
                      ..+.+|+|| |+..         +.+.++.+.++|+++|.++.-.
T Consensus       151 ~~~~yDvIi~D~~dp~~~~~~L~t~eF~~~~~~~L~~~Gi~v~q~  195 (290)
T d1xj5a_         151 AEGSYDAVIVDSSDPIGPAKELFEKPFFQSVARALRPGGVVCTQA  195 (290)
T ss_dssp             CTTCEEEEEECCCCTTSGGGGGGSHHHHHHHHHHEEEEEEEEEEC
T ss_pred             cccCccEEEEcCCCCCCcchhhCCHHHHHHHHHhcCCCcEEEEec
Confidence            245799876 5433         3568889999999999998764

>d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Aquifex aeolicus [TaxId: 63363]

Probab=95.12  E-value=0.17  Score=38.35  Aligned_cols=90  Identities=20%  Similarity=0.128  Sum_probs=61.6

Q ss_pred             EEEEEcCCHHHHHHHHHHHHCCCC-EEEEEecChhHHHHHHHcCCC-eEEecCCCcccHHHHHHHHHHHcCCCccEEEEC
Q 017916          184 NVLIMGAGPIGLVTMLGARAFGAP-RIVIVDVDDYRLSVAKELGAD-NIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDC  261 (364)
Q Consensus       184 ~VLI~Gag~~G~~ai~la~~~g~~-~vv~~~~~~~~~~~~~~lg~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid~  261 (364)
                      +|+|.|.|.+|...+.-++..|.. .|++.+.+++..+.+++++.. ....  ... .          ......|++|-|
T Consensus         3 ~I~IIG~G~mG~sla~~L~~~g~~~~I~~~D~~~~~~~~a~~~~~~~~~~~--~~~-~----------~~~~~~dlIila   69 (171)
T d2g5ca2           3 NVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTT--SIA-K----------VEDFSPDFVMLS   69 (171)
T ss_dssp             EEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEES--CGG-G----------GGGTCCSEEEEC
T ss_pred             EEEEEccCHHHHHHHHHHHhcCCCeEEEEEECChHHHHHHHHhhcchhhhh--hhh-h----------hhcccccccccc
Confidence            689999999999988888888864 688999999999999998853 3221  100 0          012357888888


Q ss_pred             CCCH---HHHHHHHHhcccCCEEEEEcC
Q 017916          262 AGFN---KTMSTALSATRAGGKVCLVGM  286 (364)
Q Consensus       262 ~g~~---~~~~~~~~~l~~~G~~v~~g~  286 (364)
                      +-..   +.+..+...++++..++.++.
T Consensus        70 ~p~~~~~~vl~~l~~~~~~~~ii~d~~s   97 (171)
T d2g5ca2          70 SPVRTFREIAKKLSYILSEDATVTDQGS   97 (171)
T ss_dssp             SCHHHHHHHHHHHHHHSCTTCEEEECCS
T ss_pred             CCchhhhhhhhhhhcccccccccccccc
Confidence            7732   233345556666667766654

>d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Haemophilus influenzae [TaxId: 727]

Probab=95.03  E-value=0.058  Score=41.33  Aligned_cols=121  Identities=16%  Similarity=0.123  Sum_probs=66.8

Q ss_pred             HHHcC-CCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHH-HHcCC---CeEEecCCCcccHHHHHHHHH
Q 017916          174 CRRAN-IGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KELGA---DNIVKVSTNLQDIAEEVEKIQ  248 (364)
Q Consensus       174 l~~~~-~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~-~~lg~---~~~~~~~~~~~~~~~~i~~~~  248 (364)
                      ++..+ ..++.+|+|.|+|+++.+++.-+...+ +.+.++.++.++.+.+ +.++.   ......+..            
T Consensus         9 l~~~~~~~~~k~vlIlGaGGaarai~~aL~~~~-~~i~I~nR~~~~a~~l~~~~~~~~~~~~~~~~~~------------   75 (171)
T d1p77a1           9 LQRLNWLRPNQHVLILGAGGATKGVLLPLLQAQ-QNIVLANRTFSKTKELAERFQPYGNIQAVSMDSI------------   75 (171)
T ss_dssp             HHHTTCCCTTCEEEEECCSHHHHTTHHHHHHTT-CEEEEEESSHHHHHHHHHHHGGGSCEEEEEGGGC------------
T ss_pred             HHHcCCCCCCCEEEEECCcHHHHHHHHHHcccC-ceeeeccchHHHHHHHHHHHhhccccchhhhccc------------
Confidence            44333 347889999999999999888777655 5788888888776644 44431   112221110            


Q ss_pred             HHcCCCccEEEECCCCHHH---HHHHHHhcccCCEEEEEcCCCCCccccchhhhhcCc-EEE-eec
Q 017916          249 KAMGTGIDVSFDCAGFNKT---MSTALSATRAGGKVCLVGMGHHEMTVPLTPAAVREV-DVV-GVF  309 (364)
Q Consensus       249 ~~~~~~~d~vid~~g~~~~---~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~-~~~-~~~  309 (364)
                        .-..+|++|+|+..+..   .......++++..+++.-.........+..+-.++. ++. |..
T Consensus        76 --~~~~~diiIN~tp~g~~~~~~~~~~~~~~~~~~~~D~vy~~p~~T~~l~~A~~~g~~~v~~Gl~  139 (171)
T d1p77a1          76 --PLQTYDLVINATSAGLSGGTASVDAEILKLGSAFYDMQYAKGTDTPFIALCKSLGLTNVSDGFG  139 (171)
T ss_dssp             --CCSCCSEEEECCCC-------CCCHHHHHHCSCEEESCCCTTSCCHHHHHHHHTTCCCEECSHH
T ss_pred             --cccccceeeecccccccccccchhhhhhcccceeeeeeccCcccHHHHHHHHHcCCCcccCcHH
Confidence              12578999999875311   111233445566665553322222333333444444 454 443

>d1uira_ c.66.1.17 (A:) Spermidine synthase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Thermus thermophilus [TaxId: 274]

Probab=95.00  E-value=0.082  Score=44.74  Aligned_cols=95  Identities=24%  Similarity=0.242  Sum_probs=64.6

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcC------C----C-eEEecCCCcccHHHHHHHHH
Q 017916          180 GPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELG------A----D-NIVKVSTNLQDIAEEVEKIQ  248 (364)
Q Consensus       180 ~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg------~----~-~~~~~~~~~~~~~~~i~~~~  248 (364)
                      ...++|||.|+|. |..+-.+++......|.+++.+++-.+.+++.-      +    . .++.     .|..+.++   
T Consensus        76 ~~pk~VLiiG~G~-G~~~~~ll~~~~~~~v~~VEiD~~Vi~~a~~~f~~~~~~~~~d~rv~i~~-----~Da~~~l~---  146 (312)
T d1uira_          76 PEPKRVLIVGGGE-GATLREVLKHPTVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVI-----DDARAYLE---  146 (312)
T ss_dssp             SCCCEEEEEECTT-SHHHHHHTTSTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEE-----SCHHHHHH---
T ss_pred             CCcceEEEeCCCc-hHHHHHHHhcCCcceEEEecCCHHHHHHHHhcCcccccCccCCCceEEEE-----chHHHHhh---
Confidence            4557999998754 566677777776768999999998888777531      1    0 1221     34444333   


Q ss_pred             HHcCCCccEEE-EC---CC---------CHHHHHHHHHhcccCCEEEEE
Q 017916          249 KAMGTGIDVSF-DC---AG---------FNKTMSTALSATRAGGKVCLV  284 (364)
Q Consensus       249 ~~~~~~~d~vi-d~---~g---------~~~~~~~~~~~l~~~G~~v~~  284 (364)
                       ..+.++|+|| |.   .+         +.+.++.+.++|+++|.++.-
T Consensus       147 -~~~~~yDvIi~D~~dp~~~~~~~~~L~t~eF~~~~~~~L~p~Gvlv~~  194 (312)
T d1uira_         147 -RTEERYDVVIIDLTDPVGEDNPARLLYTVEFYRLVKAHLNPGGVMGMQ  194 (312)
T ss_dssp             -HCCCCEEEEEEECCCCBSTTCGGGGGSSHHHHHHHHHTEEEEEEEEEE
T ss_pred             -hcCCcccEEEEeCCCcccccchhhhhhhHHHHHHHHHhcCCCceEEEe
Confidence             3467899987 44   22         246778899999999998864

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=94.98  E-value=0.048  Score=44.53  Aligned_cols=81  Identities=19%  Similarity=0.299  Sum_probs=48.2

Q ss_pred             CEEEEEcC-CHHHHHHHHHHH---HCCCCEEEEEecChhHHHHHHHc---CCC-eEEecCC-CcccHHHHHHHHHH-HcC
Q 017916          183 TNVLIMGA-GPIGLVTMLGAR---AFGAPRIVIVDVDDYRLSVAKEL---GAD-NIVKVST-NLQDIAEEVEKIQK-AMG  252 (364)
Q Consensus       183 ~~VLI~Ga-g~~G~~ai~la~---~~g~~~vv~~~~~~~~~~~~~~l---g~~-~~~~~~~-~~~~~~~~i~~~~~-~~~  252 (364)
                      .+|||+|+ +++|.+.++.+.   ..|+ .|+.+.++.++.+.++++   +.. .++..|- +.++..+..+.+.. ...
T Consensus         3 KtilITGas~GIG~a~a~~l~~~a~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~   81 (248)
T d1snya_           3 NSILITGCNRGLGLGLVKALLNLPQPPQ-HLFTTCRNREQAKELEDLAKNHSNIHILEIDLRNFDAYDKLVADIEGVTKD   81 (248)
T ss_dssp             SEEEESCCSSHHHHHHHHHHHTSSSCCS-EEEEEESCTTSCHHHHHHHHHCTTEEEEECCTTCGGGHHHHHHHHHHHHGG
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHHHHhcCCcEEEEEEEeccHHHHHHHHhhhHHHhhc
Confidence            47999998 999998876553   3577 677777777665444332   222 2233332 23444444444322 123


Q ss_pred             CCccEEEECCCC
Q 017916          253 TGIDVSFDCAGF  264 (364)
Q Consensus       253 ~~~d~vid~~g~  264 (364)
                      +++|++++++|.
T Consensus        82 ~~iDiLvnNAg~   93 (248)
T d1snya_          82 QGLNVLFNNAGI   93 (248)
T ss_dssp             GCCSEEEECCCC
T ss_pred             CCcceEEeeccc
Confidence            579999998773

>d2as0a2 c.66.1.51 (A:73-396) Hypothetical protein PH1915, middle and C-terminal domains {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein PH1915, middle and C-terminal domains
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=94.97  E-value=0.072  Score=45.44  Aligned_cols=106  Identities=23%  Similarity=0.225  Sum_probs=65.2

Q ss_pred             cCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHH----cCCCeEEecCCCcccHHHHHHHHHHHcC
Q 017916          177 ANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKE----LGADNIVKVSTNLQDIAEEVEKIQKAMG  252 (364)
Q Consensus       177 ~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~i~~~~~~~~  252 (364)
                      ..+++|++||=.++|. |..++..|+ .|+..|++++.+++..+.+++    .|...-+.+  ...|..+.+..+.. .+
T Consensus       141 ~~~~~g~~VLDl~~g~-G~~si~~a~-~ga~~V~~vD~s~~al~~a~~N~~~ngl~~~~~~--~~~d~~~~~~~~~~-~~  215 (324)
T d2as0a2         141 KWVQPGDRVLDVFTYT-GGFAIHAAI-AGADEVIGIDKSPRAIETAKENAKLNGVEDRMKF--IVGSAFEEMEKLQK-KG  215 (324)
T ss_dssp             GGCCTTCEEEETTCTT-THHHHHHHH-TTCSEEEEEESCHHHHHHHHHHHHHTTCGGGEEE--EESCHHHHHHHHHH-TT
T ss_pred             hhcCCCCeeecccCcc-cchhhhhhh-cCCcEEEeecCCHHHHHHHHHHHHHcCCCcccee--eechhhhhhHHHHh-cc
Confidence            3468899998876422 333344443 478789999999988777654    455321111  12344444444332 35


Q ss_pred             CCccEEEE-CC--CC------------HHHHHHHHHhcccCCEEEEEcCC
Q 017916          253 TGIDVSFD-CA--GF------------NKTMSTALSATRAGGKVCLVGMG  287 (364)
Q Consensus       253 ~~~d~vid-~~--g~------------~~~~~~~~~~l~~~G~~v~~g~~  287 (364)
                      ..||+|+- .-  +.            .+.+..+.++|+|||.++.+..+
T Consensus       216 ~~fD~Vi~DpP~~~~~~~~~~~~~~~y~~l~~~a~~ll~pGG~lv~~s~s  265 (324)
T d2as0a2         216 EKFDIVVLDPPAFVQHEKDLKAGLRAYFNVNFAGLNLVKDGGILVTCSCS  265 (324)
T ss_dssp             CCEEEEEECCCCSCSSGGGHHHHHHHHHHHHHHHHTTEEEEEEEEEEECC
T ss_pred             CCCCchhcCCccccCCHHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEeCC
Confidence            68999884 22  11            13566778899999999988643

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.96  E-value=0.078  Score=43.16  Aligned_cols=47  Identities=28%  Similarity=0.336  Sum_probs=37.9

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHH-HHHHcCCC
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLS-VAKELGAD  228 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~-~~~~lg~~  228 (364)
                      +|.++||+|+ +++|.+.++.+...|+ .|+.+++++++.+ ..++++..
T Consensus         4 kGKvalITGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~l~~~   52 (248)
T d2o23a1           4 KGLVAVITGGASGLGLATAERLVGQGA-SAVLLDLPNSGGEAQAKKLGNN   52 (248)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECTTSSHHHHHHHHCTT
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHhCCC
Confidence            6889999998 9999999999999999 5777777776554 45667654

>d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Neisseria meningitidis, serogroup B [TaxId: 487]

Probab=94.95  E-value=0.21  Score=37.08  Aligned_cols=83  Identities=22%  Similarity=0.254  Sum_probs=57.6

Q ss_pred             EEEEEcCCHHHHHHHH-HHHHCCCCEEEEEecChhHHHHHH-HcCCCeEEecCCCcccHHHHHHHHHHHcCCCccEEEEC
Q 017916          184 NVLIMGAGPIGLVTML-GARAFGAPRIVIVDVDDYRLSVAK-ELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDC  261 (364)
Q Consensus       184 ~VLI~Gag~~G~~ai~-la~~~g~~~vv~~~~~~~~~~~~~-~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid~  261 (364)
                      +|.+.|+|.+|.+.++ |.+. |...+++.++++++.+.+. ++|+...-+   . ++            -...|++|=|
T Consensus         2 kI~fIG~G~MG~ai~~~l~~~-~~~~i~v~~r~~~~~~~l~~~~~~~~~~~---~-~~------------v~~~Div~la   64 (152)
T d1yqga2           2 NVYFLGGGNMAAAVAGGLVKQ-GGYRIYIANRGAEKRERLEKELGVETSAT---L-PE------------LHSDDVLILA   64 (152)
T ss_dssp             EEEEECCSHHHHHHHHHHHHH-CSCEEEEECSSHHHHHHHHHHTCCEEESS---C-CC------------CCTTSEEEEC
T ss_pred             EEEEEcCcHHHHHHHHHHHHC-CCCcEEEEeCChhHHHHhhhhcccccccc---c-cc------------ccccceEEEe
Confidence            6888899999998777 5554 5447899999998877664 567543211   1 11            1347999999


Q ss_pred             CCCHHHHHHHHHhcccCCEEEEE
Q 017916          262 AGFNKTMSTALSATRAGGKVCLV  284 (364)
Q Consensus       262 ~g~~~~~~~~~~~l~~~G~~v~~  284 (364)
                      +- +..+...++-+++.+.++..
T Consensus        65 vk-P~~~~~v~~~l~~~~~~viS   86 (152)
T d1yqga2          65 VK-PQDMEAACKNIRTNGALVLS   86 (152)
T ss_dssp             SC-HHHHHHHHTTCCCTTCEEEE
T ss_pred             cC-HHHHHHhHHHHhhcccEEee
Confidence            88 77777777777776665543

>d2czca2 c.2.1.3 (A:1-139,A:302-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=94.86  E-value=0.13  Score=39.36  Aligned_cols=101  Identities=21%  Similarity=0.167  Sum_probs=62.7

Q ss_pred             EEEEEcCCHHHHHHHHHHHHC-CCCEEEEEecC-hhHHHHHHHcCCCeEEecCCCcccHHHHHHHHH-------HHcCCC
Q 017916          184 NVLIMGAGPIGLVTMLGARAF-GAPRIVIVDVD-DYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQ-------KAMGTG  254 (364)
Q Consensus       184 ~VLI~Gag~~G~~ai~la~~~-g~~~vv~~~~~-~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~-------~~~~~~  254 (364)
                      +|.|.|-|-+|...++.+... ..+.|.+.+.+ ++....+.+.+.+.......    .........       ...-.+
T Consensus         4 rIaINGfGRIGR~v~Ral~~~~dieiVaINd~~~~~~~~~l~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~   79 (172)
T d2czca2           4 KVGVNGYGTIGKRVAYAVTKQDDMELIGITKTKPDFEAYRAKELGIPVYAASEE----FIPRFEKEGFEVAGTLNDLLEK   79 (172)
T ss_dssp             EEEEECCSHHHHHHHHHHHTCTTEEEEEEEESSCSHHHHHHHHTTCCEEESSGG----GHHHHHHHTCCCSCBHHHHHTT
T ss_pred             EEEEECCCHHHHHHHHHHHhCCCceEEEEecCCChHHHHHhhhcCceeeccccc----ceeeecccCccccchhhhhhcc
Confidence            688999999999888877654 34333333433 34555666666553322111    111111100       000137


Q ss_pred             ccEEEECCCCHHHHHHHHHhcccCCEEEEEcCCC
Q 017916          255 IDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGH  288 (364)
Q Consensus       255 ~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~  288 (364)
                      +|+|+||+|.......+-.++..|-+.+..+.+.
T Consensus        80 vDvViEcTG~f~~~~~~~~hl~~G~k~Vi~s~~~  113 (172)
T d2czca2          80 VDIIVDATPGGIGAKNKPLYEKAGVKAIFQGGEK  113 (172)
T ss_dssp             CSEEEECCSTTHHHHHHHHHHHHTCEEEECTTSC
T ss_pred             CCEEEECCCCCCCHHHHHHHHHcCCCEEEECCCC
Confidence            9999999998778788889999999999887543

>d1wzna1 c.66.1.43 (A:1-251) Hypothetical methyltransferase PH1305 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical methyltransferase PH1305
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=94.73  E-value=0.098  Score=42.39  Aligned_cols=95  Identities=21%  Similarity=0.246  Sum_probs=64.5

Q ss_pred             HHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHc----CCC-eEEecCCCcccHHHHHHHHHH
Q 017916          175 RRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKEL----GAD-NIVKVSTNLQDIAEEVEKIQK  249 (364)
Q Consensus       175 ~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~l----g~~-~~~~~~~~~~~~~~~i~~~~~  249 (364)
                      ......++.+||-.|+|. |..+..+++ .|+ .+++++.+++-.+.+++.    +.. .++.  ..-.++         
T Consensus        35 ~~~~~~~~~~iLDiGcGt-G~~~~~l~~-~~~-~v~gvD~s~~mi~~a~~~~~~~~~~i~~~~--~d~~~l---------  100 (251)
T d1wzna1          35 KEDAKREVRRVLDLACGT-GIPTLELAE-RGY-EVVGLDLHEEMLRVARRKAKERNLKIEFLQ--GDVLEI---------  100 (251)
T ss_dssp             HHTCSSCCCEEEEETCTT-CHHHHHHHH-TTC-EEEEEESCHHHHHHHHHHHHHTTCCCEEEE--SCGGGC---------
T ss_pred             HHhcCCCCCEEEEeCCCC-Cccchhhcc-cce-EEEEEeeccccccccccccccccccchhee--hhhhhc---------
Confidence            445667778999999865 777777777 577 799999999888777653    322 1222  111111         


Q ss_pred             HcCCCccEEEECCCC---------HHHHHHHHHhcccCCEEEE
Q 017916          250 AMGTGIDVSFDCAGF---------NKTMSTALSATRAGGKVCL  283 (364)
Q Consensus       250 ~~~~~~d~vid~~g~---------~~~~~~~~~~l~~~G~~v~  283 (364)
                      ...+.+|+|+...++         ...++.+.++|+|+|.++.
T Consensus       101 ~~~~~fD~I~~~~~~~~~~~~~~~~~~L~~~~~~LkpgG~lii  143 (251)
T d1wzna1         101 AFKNEFDAVTMFFSTIMYFDEEDLRKLFSKVAEALKPGGVFIT  143 (251)
T ss_dssp             CCCSCEEEEEECSSGGGGSCHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred             ccccccchHhhhhhhhhcCChHHHHHHHHHHHHHcCCCcEEEE
Confidence            114579999875432         1467789999999999875

>d1p91a_ c.66.1.33 (A:) rRNA methyltransferase RlmA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: rRNA methyltransferase RlmA
domain: rRNA methyltransferase RlmA
species: Escherichia coli [TaxId: 562]

Probab=94.61  E-value=0.058  Score=44.66  Aligned_cols=96  Identities=19%  Similarity=0.121  Sum_probs=66.3

Q ss_pred             CCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCC-eEEecCCCcccHHHHHHHHHHHcCCCcc
Q 017916          178 NIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGAD-NIVKVSTNLQDIAEEVEKIQKAMGTGID  256 (364)
Q Consensus       178 ~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~d  256 (364)
                      ...++.+||=.|+|. |..+..+++...-..+++++.+++..+.+++.... ....-+...-++          ....+|
T Consensus        81 ~~~~~~~iLDiGcG~-G~~~~~l~~~~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~d~~~l~~----------~~~sfD  149 (268)
T d1p91a_          81 LDDKATAVLDIGCGE-GYYTHAFADALPEITTFGLDVSKVAIKAAAKRYPQVTFCVASSHRLPF----------SDTSMD  149 (268)
T ss_dssp             SCTTCCEEEEETCTT-STTHHHHHHTCTTSEEEEEESCHHHHHHHHHHCTTSEEEECCTTSCSB----------CTTCEE
T ss_pred             cCCCCCEEEEeCCCC-cHHHHHHHHHCCCCEEEEecchHhhhhhhhcccccccceeeehhhccC----------CCCCEE
Confidence            346778999888755 66777888876433789999999988888764432 222211111111          135699


Q ss_pred             EEEECCCCHHHHHHHHHhcccCCEEEEEc
Q 017916          257 VSFDCAGFNKTMSTALSATRAGGKVCLVG  285 (364)
Q Consensus       257 ~vid~~g~~~~~~~~~~~l~~~G~~v~~g  285 (364)
                      +|+.... +..+.++.+.|+|+|.++...
T Consensus       150 ~v~~~~~-~~~~~e~~rvLkpgG~l~~~~  177 (268)
T d1p91a_         150 AIIRIYA-PCKAEELARVVKPGGWVITAT  177 (268)
T ss_dssp             EEEEESC-CCCHHHHHHHEEEEEEEEEEE
T ss_pred             EEeecCC-HHHHHHHHHHhCCCcEEEEEe
Confidence            9997554 667889999999999999875

>d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD
species: Escherichia coli [TaxId: 562]

Probab=94.53  E-value=0.02  Score=39.17  Aligned_cols=35  Identities=29%  Similarity=0.270  Sum_probs=29.5

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecCh
Q 017916          181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDD  216 (364)
Q Consensus       181 ~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~  216 (364)
                      .|.+|+|.|.|.+|+++++++...|++ |.+.+...
T Consensus         4 ~~K~v~ViGlG~sG~s~a~~L~~~g~~-v~~~D~~~   38 (93)
T d2jfga1           4 QGKNVVIIGLGLTGLSCVDFFLARGVT-PRVMDTRM   38 (93)
T ss_dssp             TTCCEEEECCSHHHHHHHHHHHHTTCC-CEEEESSS
T ss_pred             CCCEEEEEeECHHHHHHHHHHHHCCCE-EEEeeCCc
Confidence            478999999999999999999999995 66666533

>d1susa1 c.66.1.1 (A:21-247) Caffeoyl-CoA O-methyltransferase {Alfalfa (Medicago sativa) [TaxId: 3879]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: COMT-like
domain: Caffeoyl-CoA O-methyltransferase
species: Alfalfa (Medicago sativa) [TaxId: 3879]

Probab=94.46  E-value=0.23  Score=39.71  Aligned_cols=103  Identities=15%  Similarity=0.168  Sum_probs=69.4

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHCCC-CEEEEEecChhHHHHHHH----cCCCeEEecCCCcccHHHHHHHHHHH--cC
Q 017916          180 GPETNVLIMGAGPIGLVTMLGARAFGA-PRIVIVDVDDYRLSVAKE----LGADNIVKVSTNLQDIAEEVEKIQKA--MG  252 (364)
Q Consensus       180 ~~g~~VLI~Gag~~G~~ai~la~~~g~-~~vv~~~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~i~~~~~~--~~  252 (364)
                      ....+||-.|.+ +|..++.+|+.+.. ..+++++.+++..+.+++    .|...-+.+.  ..+..+.+.++...  ..
T Consensus        58 ~~~k~iLEiGT~-~GyStl~la~al~~~g~v~tie~~~~~~~~A~~~~~~~g~~~~i~~~--~g~a~~~L~~l~~~~~~~  134 (227)
T d1susa1          58 INAKNTMEIGVY-TGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGVDHKIDFR--EGPALPVLDEMIKDEKNH  134 (227)
T ss_dssp             HTCCEEEEECCG-GGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTCGGGEEEE--ESCHHHHHHHHHHCGGGT
T ss_pred             cCCCcEEEecch-hhhhHHHHHhhCCCCcEEEEEeccchhHHHHHHHHHHhccccceeee--ehHHHHHHHHHHhccccC
Confidence            345799999853 48888899988742 379999999988766654    5654322221  13555556655432  23


Q ss_pred             CCccEEE-ECCCC--HHHHHHHHHhcccCCEEEEEc
Q 017916          253 TGIDVSF-DCAGF--NKTMSTALSATRAGGKVCLVG  285 (364)
Q Consensus       253 ~~~d~vi-d~~g~--~~~~~~~~~~l~~~G~~v~~g  285 (364)
                      +.||+|| |+--.  ...+..+++.|++||.++.=+
T Consensus       135 ~~fD~iFiDa~k~~y~~~~e~~~~ll~~gGiii~DN  170 (227)
T d1susa1         135 GSYDFIFVDADKDNYLNYHKRLIDLVKVGGVIGYDN  170 (227)
T ss_dssp             TCBSEEEECSCSTTHHHHHHHHHHHBCTTCCEEEET
T ss_pred             CceeEEEeccchhhhHHHHHHHHhhcCCCcEEEEcc
Confidence            5799987 54332  467788999999999988754

>d2o07a1 c.66.1.17 (A:16-300) Spermidine synthase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.40  E-value=0.12  Score=43.12  Aligned_cols=98  Identities=21%  Similarity=0.258  Sum_probs=65.4

Q ss_pred             CCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcC---------CC-eEEecCCCcccHHHHHHHH
Q 017916          178 NIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELG---------AD-NIVKVSTNLQDIAEEVEKI  247 (364)
Q Consensus       178 ~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg---------~~-~~~~~~~~~~~~~~~i~~~  247 (364)
                      .....++|||.|+|. |.++-.+++..+...+.+++-+++-.+.+++.-         .. .++.     .|-.+    +
T Consensus        75 ~~~~pk~vLiiGgG~-G~~~~~~l~~~~~~~v~~vEiD~~Vv~~a~~~~~~~~~~~~d~rv~i~~-----~Da~~----~  144 (285)
T d2o07a1          75 SHPNPRKVLIIGGGD-GGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHV-----GDGFE----F  144 (285)
T ss_dssp             TSSSCCEEEEEECTT-SHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEE-----SCHHH----H
T ss_pred             hCcCcCeEEEeCCCc-hHHHHHHHHcCCcceeeeccCCHHHHHHHHhhchhhccccCCCCceEEE-----ccHHH----H
Confidence            335568999998755 556667777777778999999998888887642         11 1221     23223    3


Q ss_pred             HHHcCCCccEEE-ECCC---------CHHHHHHHHHhcccCCEEEEEc
Q 017916          248 QKAMGTGIDVSF-DCAG---------FNKTMSTALSATRAGGKVCLVG  285 (364)
Q Consensus       248 ~~~~~~~~d~vi-d~~g---------~~~~~~~~~~~l~~~G~~v~~g  285 (364)
                      .+...+++|+|| |...         +.+.++.+-++|+++|.++.-.
T Consensus       145 l~~~~~~yDvIi~D~~~p~~~~~~L~t~eF~~~~~~~L~~~Gi~v~q~  192 (285)
T d2o07a1         145 MKQNQDAFDVIITDSSDPMGPAESLFKESYYQLMKTALKEDGVLCCQG  192 (285)
T ss_dssp             HHTCSSCEEEEEEECC-----------CHHHHHHHHHEEEEEEEEEEE
T ss_pred             HhcCCCCCCEEEEcCCCCCCcccccccHHHHHHHHHhcCCCCeEEEec
Confidence            333467899987 5432         1356788899999999998754

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.35  E-value=0.18  Score=41.97  Aligned_cols=78  Identities=19%  Similarity=0.195  Sum_probs=43.1

Q ss_pred             EEEEEcC-CHHHHHHHHHHHHCCCCEEEEE--ecChhH----HHHHHHcCC---C-eEEecCCCcccHHHHHHHHHH-Hc
Q 017916          184 NVLIMGA-GPIGLVTMLGARAFGAPRIVIV--DVDDYR----LSVAKELGA---D-NIVKVSTNLQDIAEEVEKIQK-AM  251 (364)
Q Consensus       184 ~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~--~~~~~~----~~~~~~lg~---~-~~~~~~~~~~~~~~~i~~~~~-~~  251 (364)
                      .|||+|+ +++|.+.+..+...|++++.+.  ..+.++    .+.++++..   . ..+..|-.+   .+.+.++.. ..
T Consensus         4 VvlITGassGIG~a~A~~la~~Ga~v~~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~Dv~~---~~~~~~~~~~~~   80 (285)
T d1jtva_           4 VVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRD---SKSVAAARERVT   80 (285)
T ss_dssp             EEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTC---HHHHHHHHHTCT
T ss_pred             EEEEccCCCHHHHHHHHHHHHCCCCeEEEEEecCChhhhHHHHHHHHHHhccCCceEEEeccccc---hHhhhhhhhhcc
Confidence            3577898 9999999999988998744332  233222    223344432   1 122222222   122333322 22


Q ss_pred             CCCccEEEECCCC
Q 017916          252 GTGIDVSFDCAGF  264 (364)
Q Consensus       252 ~~~~d~vid~~g~  264 (364)
                      .+.+|+++++.|.
T Consensus        81 ~g~idilvnnag~   93 (285)
T d1jtva_          81 EGRVDVLVCNAGL   93 (285)
T ss_dssp             TSCCSEEEECCCC
T ss_pred             ccchhhhhhcccc
Confidence            4579999998864

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=94.28  E-value=0.1  Score=42.68  Aligned_cols=79  Identities=18%  Similarity=0.144  Sum_probs=46.2

Q ss_pred             EEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHH--HHHHHc----CCCeEEec-C-CCcccHHHHHHHHH---HHc
Q 017916          184 NVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRL--SVAKEL----GADNIVKV-S-TNLQDIAEEVEKIQ---KAM  251 (364)
Q Consensus       184 ~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~--~~~~~l----g~~~~~~~-~-~~~~~~~~~i~~~~---~~~  251 (364)
                      +.||+|+ +++|.+.++.+...|+ .|+.++++.++.  ++.+++    +....... + ....+..+.++++.   ...
T Consensus         3 vAlVTGas~GIG~aia~~la~~G~-~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (266)
T d1mxha_           3 AAVITGGARRIGHSIAVRLHQQGF-RVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCSFRA   81 (266)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHHHHHH
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCchHHHHHHHHHHHhhcCCceEEEecccccchhHHHHHHHHHHHHHHH
Confidence            4588898 9999999999999999 567776664432  223322    33322211 1 11222333333322   112


Q ss_pred             CCCccEEEECCC
Q 017916          252 GTGIDVSFDCAG  263 (364)
Q Consensus       252 ~~~~d~vid~~g  263 (364)
                      -+++|++++++|
T Consensus        82 ~g~iDilvnnAG   93 (266)
T d1mxha_          82 FGRCDVLVNNAS   93 (266)
T ss_dssp             HSCCCEEEECCC
T ss_pred             hCCCCEEEECCc
Confidence            247999999988

>d2b2ca1 c.66.1.17 (A:3-314) Spermidine synthase {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Caenorhabditis elegans [TaxId: 6239]

Probab=94.22  E-value=0.17  Score=42.50  Aligned_cols=101  Identities=20%  Similarity=0.201  Sum_probs=64.5

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCC-----cccHHHHHHHHHHHcCCC
Q 017916          180 GPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTN-----LQDIAEEVEKIQKAMGTG  254 (364)
Q Consensus       180 ~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~-----~~~~~~~i~~~~~~~~~~  254 (364)
                      ....+|||.|+|. |..+-.+++......+..++-+++-.+.++++-....-.+++.     -.|..+.+    +.....
T Consensus       105 ~~pk~VLIiGgG~-G~~~rellk~~~v~~v~~VEID~~Vv~~a~~~~~~~~~~~~dprv~i~i~Da~~~l----~~~~~~  179 (312)
T d2b2ca1         105 PDPKRVLIIGGGD-GGILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGDGFEFL----KNHKNE  179 (312)
T ss_dssp             SSCCEEEEESCTT-SHHHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSCHHHHH----HHCTTC
T ss_pred             CCCCeEEEeCCCc-hHHHHHHHHcCCcceEEEEcccHHHHHHHHhhchhhccccCCCCeEEEEchHHHHH----HhCCCC
Confidence            4457999998755 5566677787777789999999998888887432100000000     12333333    334678


Q ss_pred             ccEEEE-CC---C------CHHHHHHHHHhcccCCEEEEEc
Q 017916          255 IDVSFD-CA---G------FNKTMSTALSATRAGGKVCLVG  285 (364)
Q Consensus       255 ~d~vid-~~---g------~~~~~~~~~~~l~~~G~~v~~g  285 (364)
                      +|+||- ..   +      +.+.++.+.++|+++|.++.-.
T Consensus       180 yDvII~D~~dp~~~~~~L~t~eFy~~~~~~L~~~Gi~v~q~  220 (312)
T d2b2ca1         180 FDVIITDSSDPVGPAESLFGQSYYELLRDALKEDGILSSQG  220 (312)
T ss_dssp             EEEEEECCC-------------HHHHHHHHEEEEEEEEEEC
T ss_pred             CCEEEEcCCCCCCcchhhhhHHHHHHHHhhcCCCcEEEEec
Confidence            999873 22   1      2356778889999999999865

>d2frna1 c.66.1.47 (A:19-278) Hypothetical protein PH0793 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Met-10+ protein-like
domain: Hypothetical protein PH0793
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=94.18  E-value=0.041  Score=45.41  Aligned_cols=97  Identities=18%  Similarity=0.218  Sum_probs=61.5

Q ss_pred             CCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHH----cCCCe-EEecCCCcccHHHHHHHHHHHcC
Q 017916          178 NIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKE----LGADN-IVKVSTNLQDIAEEVEKIQKAMG  252 (364)
Q Consensus       178 ~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~----lg~~~-~~~~~~~~~~~~~~i~~~~~~~~  252 (364)
                      .+++|++||-.++|. |..++.+|+. |+..|++++.+++..+++++    .+... +..+.....++.         ..
T Consensus       104 ~~~~g~~VlD~~aG~-G~~~l~~a~~-~~~~V~avd~n~~a~~~~~~N~~~n~l~~~v~~~~~D~~~~~---------~~  172 (260)
T d2frna1         104 VAKPDELVVDMFAGI-GHLSLPIAVY-GKAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFP---------GE  172 (260)
T ss_dssp             HCCTTCEEEETTCTT-TTTHHHHHHH-TCCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCC---------CC
T ss_pred             hcCCccEEEECcceE-cHHHHHHHHh-CCcEEEEecCCHHHHHHHHHHHHHhCCCceEEEEEcchHHhc---------cC
Confidence            358999999987533 4455566665 54489999999988777653    35432 222222211111         13


Q ss_pred             CCccEEE-EC-CCCHHHHHHHHHhcccCCEEEEEc
Q 017916          253 TGIDVSF-DC-AGFNKTMSTALSATRAGGKVCLVG  285 (364)
Q Consensus       253 ~~~d~vi-d~-~g~~~~~~~~~~~l~~~G~~v~~g  285 (364)
                      ..+|.|+ +. ..+.+.+..+++.+++||.+..+.
T Consensus       173 ~~~D~Ii~~~p~~~~~~l~~a~~~l~~gG~lh~~~  207 (260)
T d2frna1         173 NIADRILMGYVVRTHEFIPKALSIAKDGAIIHYHN  207 (260)
T ss_dssp             SCEEEEEECCCSSGGGGHHHHHHHEEEEEEEEEEE
T ss_pred             CCCCEEEECCCCchHHHHHHHHhhcCCCCEEEEEe
Confidence            4588665 32 344677888999999999886653

>d1wxxa2 c.66.1.51 (A:65-382) Hypothetical protein TTHA1280, middle and C-terminal domains {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein TTHA1280, middle and C-terminal domains
species: Thermus thermophilus [TaxId: 274]

Probab=94.17  E-value=0.078  Score=45.08  Aligned_cols=101  Identities=18%  Similarity=0.130  Sum_probs=61.9

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHH----cCCCeEEecCCCcccHHHHHHHHHHHcCCCc
Q 017916          180 GPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKE----LGADNIVKVSTNLQDIAEEVEKIQKAMGTGI  255 (364)
Q Consensus       180 ~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~  255 (364)
                      .+|++||=.++|. |..++++|+  |+..|++++.++...+.+++    .|.+.+...   ..+..+.++.+.. .+..|
T Consensus       144 ~~g~rVLDl~~gt-G~~s~~~a~--g~~~V~~vD~s~~al~~a~~n~~~ngl~~~~~i---~~d~~~~~~~~~~-~~~~f  216 (318)
T d1wxxa2         144 FRGERALDVFSYA-GGFALHLAL--GFREVVAVDSSAEALRRAEENARLNGLGNVRVL---EANAFDLLRRLEK-EGERF  216 (318)
T ss_dssp             CCEEEEEEETCTT-THHHHHHHH--HEEEEEEEESCHHHHHHHHHHHHHTTCTTEEEE---ESCHHHHHHHHHH-TTCCE
T ss_pred             hCCCeeeccCCCC-cHHHHHHHh--cCCcEEeecchHHHHHHHHHHHHHcCCCCccee---eccHHHHhhhhHh-hhcCC
Confidence            4689998886532 333445554  44579999999988777653    455432211   1344444443332 35689


Q ss_pred             cEEEE-C--CCC------------HHHHHHHHHhcccCCEEEEEcCC
Q 017916          256 DVSFD-C--AGF------------NKTMSTALSATRAGGKVCLVGMG  287 (364)
Q Consensus       256 d~vid-~--~g~------------~~~~~~~~~~l~~~G~~v~~g~~  287 (364)
                      |+|+- .  .+.            .+....++++|+|||.++.+..+
T Consensus       217 D~Vi~DpP~~~~~~~~~~~~~~~~~~l~~~a~~lLkpGG~Lv~~scs  263 (318)
T d1wxxa2         217 DLVVLDPPAFAKGKKDVERAYRAYKEVNLRAIKLLKEGGILATASCS  263 (318)
T ss_dssp             EEEEECCCCSCCSTTSHHHHHHHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred             CEEEEcCCccccchHHHHHHHHHHHHHHHHHHHHcCCCCEEEEEeCC
Confidence            99874 2  111            13556788899999999987644

>d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Salmonella typhimurium [TaxId: 90371]

Probab=94.17  E-value=0.33  Score=36.32  Aligned_cols=88  Identities=15%  Similarity=0.151  Sum_probs=62.0

Q ss_pred             EEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcCCCccEEEECCC
Q 017916          184 NVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAG  263 (364)
Q Consensus       184 ~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid~~g  263 (364)
                      +|-|.|.|.+|...+.-+...|+ .|++.++++++.+.+.+.+....       .+    .++..    ...|++|-|+.
T Consensus         2 kIgiIGlG~MG~~~A~~L~~~G~-~V~~~d~~~~~~~~~~~~~~~~~-------~~----~~e~~----~~~d~ii~~v~   65 (161)
T d1vpda2           2 KVGFIGLGIMGKPMSKNLLKAGY-SLVVSDRNPEAIADVIAAGAETA-------ST----AKAIA----EQCDVIITMLP   65 (161)
T ss_dssp             EEEEECCSTTHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCEEC-------SS----HHHHH----HHCSEEEECCS
T ss_pred             EEEEEehhHHHHHHHHHHHHCCC-eEEEEeCCcchhHHHHHhhhhhc-------cc----HHHHH----hCCCeEEEEcC
Confidence            57888999999988887777899 68899999999888888776421       11    12221    24789999987


Q ss_pred             CHHHHHHH-------HHhcccCCEEEEEcCC
Q 017916          264 FNKTMSTA-------LSATRAGGKVCLVGMG  287 (364)
Q Consensus       264 ~~~~~~~~-------~~~l~~~G~~v~~g~~  287 (364)
                      +++.....       ...++++..++.++..
T Consensus        66 ~~~~v~~v~~~~~~~~~~~~~g~iiid~sT~   96 (161)
T d1vpda2          66 NSPHVKEVALGENGIIEGAKPGTVLIDMSSI   96 (161)
T ss_dssp             SHHHHHHHHHSTTCHHHHCCTTCEEEECSCC
T ss_pred             CHHHHHHHHhCCcchhhccCCCCEEEECCCC
Confidence            66665553       3455666777776543

>d1mjfa_ c.66.1.17 (A:) Putative spermidine synthetase PF0127 (SpeE) {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Putative spermidine synthetase PF0127 (SpeE)
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=94.05  E-value=0.25  Score=40.86  Aligned_cols=94  Identities=20%  Similarity=0.257  Sum_probs=61.0

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcC-CC---------------eEEecCCCcccHHHH
Q 017916          180 GPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELG-AD---------------NIVKVSTNLQDIAEE  243 (364)
Q Consensus       180 ~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg-~~---------------~~~~~~~~~~~~~~~  243 (364)
                      .+..+|||.|+|. |..+-.+++. +...+.+++-+++-.++++++- ..               .++.     .|..+.
T Consensus        71 ~~p~~vLiiG~G~-G~~~~~~l~~-~~~~v~~VEiD~~Vi~~a~~~f~~~~~~~~~~~~~~d~rv~i~~-----~Da~~~  143 (276)
T d1mjfa_          71 PKPKRVLVIGGGD-GGTVREVLQH-DVDEVIMVEIDEDVIMVSKDLIKIDNGLLEAMLNGKHEKAKLTI-----GDGFEF  143 (276)
T ss_dssp             SCCCEEEEEECTT-SHHHHHHTTS-CCSEEEEEESCHHHHHHHHHHTCTTTTHHHHHHTTCCSSEEEEE-----SCHHHH
T ss_pred             CCCceEEEecCCc-hHHHHHHHHh-CCceEEEecCCHHHHHHHHHhhhhccchhhhhhccCCCCceEEE-----ChHHHH
Confidence            4568999998654 3444555554 4557889999988888887632 11               1221     233333


Q ss_pred             HHHHHHHcCCCccEEE-ECCC---------CHHHHHHHHHhcccCCEEEEEc
Q 017916          244 VEKIQKAMGTGIDVSF-DCAG---------FNKTMSTALSATRAGGKVCLVG  285 (364)
Q Consensus       244 i~~~~~~~~~~~d~vi-d~~g---------~~~~~~~~~~~l~~~G~~v~~g  285 (364)
                      ++    . .+++|+|| |+..         +.+.++.+.++|+++|.++.-.
T Consensus       144 l~----~-~~~yDvIi~D~~~~~~~~~~L~t~eF~~~~~~~L~~~Gv~v~q~  190 (276)
T d1mjfa_         144 IK----N-NRGFDVIIADSTDPVGPAKVLFSEEFYRYVYDALNNPGIYVTQA  190 (276)
T ss_dssp             HH----H-CCCEEEEEEECCCCC-----TTSHHHHHHHHHHEEEEEEEEEEE
T ss_pred             Hh----c-cCCCCEEEEeCCCCCCCcccccCHHHHHhhHhhcCCCceEEEec
Confidence            32    2 46799986 4433         2467888999999999988654

>d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Phenylalanine dehydrogenase
species: Rhodococcus sp., M4 [TaxId: 1831]

Probab=94.04  E-value=0.066  Score=42.16  Aligned_cols=81  Identities=26%  Similarity=0.308  Sum_probs=58.2

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcCCCccEEE
Q 017916          180 GPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF  259 (364)
Q Consensus       180 ~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vi  259 (364)
                      -.|.+|+|.|-|.+|..+++++...|+ .+++.+.+.++.+....+|...+ .    .+++          ...+.|+.+
T Consensus        25 L~gk~v~IqG~G~VG~~~A~~L~~~Ga-kvvv~d~d~~~~~~~~~~g~~~~-~----~~~~----------~~~~~DI~i   88 (201)
T d1c1da1          25 LDGLTVLVQGLGAVGGSLASLAAEAGA-QLLVADTDTERVAHAVALGHTAV-A----LEDV----------LSTPCDVFA   88 (201)
T ss_dssp             STTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCEEC-C----GGGG----------GGCCCSEEE
T ss_pred             CCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEecchHHHHHHHHhhccccc-C----cccc----------ccccceeee
Confidence            378999999999999999999999999 67888888888888888887532 1    1121          135789988


Q ss_pred             ECCCCHHHHHHHHHhcc
Q 017916          260 DCAGFNKTMSTALSATR  276 (364)
Q Consensus       260 d~~g~~~~~~~~~~~l~  276 (364)
                      =|......-....+.++
T Consensus        89 PcA~~~~I~~~~a~~i~  105 (201)
T d1c1da1          89 PCAMGGVITTEVARTLD  105 (201)
T ss_dssp             ECSCSCCBCHHHHHHCC
T ss_pred             cccccccccHHHHhhhh
Confidence            76653322234445553

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

Probab=93.93  E-value=0.15  Score=41.84  Aligned_cols=83  Identities=22%  Similarity=0.365  Sum_probs=50.6

Q ss_pred             CCCCEEEEEcC-C--HHHHHHHHHHHHCCCCEEEEEecChhHH-H-HHHHcCCCe-EEecC-CCcccHHHHHHHHHHHc-
Q 017916          180 GPETNVLIMGA-G--PIGLVTMLGARAFGAPRIVIVDVDDYRL-S-VAKELGADN-IVKVS-TNLQDIAEEVEKIQKAM-  251 (364)
Q Consensus       180 ~~g~~VLI~Ga-g--~~G~~ai~la~~~g~~~vv~~~~~~~~~-~-~~~~lg~~~-~~~~~-~~~~~~~~~i~~~~~~~-  251 (364)
                      -+|.++||+|+ |  ++|.+.++-+...|+ .|+.+..+.++. + ..++++... .+..+ ....+..+..+.+.... 
T Consensus         4 l~gK~~lItGaag~~GIG~aiA~~la~~Ga-~Vil~~~~~~~~~~~~~~~~~~~~~~~~~dv~~~~~~~~~~~~v~~~~~   82 (268)
T d2h7ma1           4 LDGKRILVSGIITDSSIAFHIARVAQEQGA-QLVLTGFDRLRLIQRITDRLPAKAPLLELDVQNEEHLASLAGRVTEAIG   82 (268)
T ss_dssp             TTTCEEEECCCSSTTCHHHHHHHHHHHTTC-EEEEEECSCHHHHHHHHTTSSSCCCEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred             CCCCEEEEECCCCCCHHHHHHHHHHHHcCC-EEEEEeCChHHHHHHHHHHcCCceeeEeeecccccccccccchhhhccc
Confidence            46889999985 4  599999999999999 466666666553 3 334565432 22222 22233333333333222 


Q ss_pred             -CCCccEEEECCC
Q 017916          252 -GTGIDVSFDCAG  263 (364)
Q Consensus       252 -~~~~d~vid~~g  263 (364)
                       .+.+|++++++|
T Consensus        83 ~~~~ld~~i~~ag   95 (268)
T d2h7ma1          83 AGNKLDGVVHSIG   95 (268)
T ss_dssp             TTCCEEEEEECCC
T ss_pred             cCCCcceeeeccc
Confidence             356899999887

>d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 2
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=93.83  E-value=0.03  Score=43.59  Aligned_cols=35  Identities=20%  Similarity=0.401  Sum_probs=30.0

Q ss_pred             CCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecCh
Q 017916          182 ETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDD  216 (364)
Q Consensus       182 g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~  216 (364)
                      +.+|+|.|+|+.|+.++..++..|++.|.+++.++
T Consensus         4 ~~kVaIIGaGpaGl~aA~~l~~~G~~~V~v~E~~~   38 (196)
T d1gtea4           4 SAKIALLGAGPASISCASFLARLGYSDITIFEKQE   38 (196)
T ss_dssp             GCCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSS
T ss_pred             CCEEEEECChHHHHHHHHHHHHCCCCeEEEEEecC
Confidence            57999999999999999999999996566676654

>d1jbqa_ c.79.1.1 (A:) Cystathionine beta-synthase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: Cystathionine beta-synthase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.82  E-value=0.42  Score=40.99  Aligned_cols=112  Identities=17%  Similarity=0.243  Sum_probs=73.6

Q ss_pred             HHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEec--ChhHHHHHHHcCCCeEEec-------------------
Q 017916          175 RRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDV--DDYRLSVAKELGADNIVKV-------------------  233 (364)
Q Consensus       175 ~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~--~~~~~~~~~~lg~~~~~~~-------------------  233 (364)
                      +...++++..|+...+|..|.+++..|+.+|.+.++++..  +++|.+.++.+|++.+..-                   
T Consensus        90 ~~g~~~~~~~vv~aSsGN~g~a~A~~a~~~Gi~~~iv~p~~~~~~k~~~i~~~GA~vv~v~~~~~~~~~~~~~~~~~~~~  169 (355)
T d1jbqa_          90 RDGTLKPGDTIIEPTSGNTGIGLALAAAVRGYRCIIVMPEKMSSEKVDVLRALGAEIVRTPTNARFDSPESHVGVAWRLK  169 (355)
T ss_dssp             HHTCSCTTCEEEEECSSHHHHHHHHHHHHHTCEEEEEECSCCCHHHHHHHHHTTCEEEECCC-------CCHHHHHHHHH
T ss_pred             HcCCcccCceEEEecccchhhHHHHHHHhccCCeEEEeeccchHHHHHHHHhcCCeEEEecccccchhhhhhhhHHHHHH
Confidence            4566777777777677999999999999999976666633  6688899999998754310                   


Q ss_pred             ---------CC--CcccHH----HHHHHHHHHcCCCccEEEECCCCHHHHHHHHHhc---ccCCEEEEEcC
Q 017916          234 ---------ST--NLQDIA----EEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSAT---RAGGKVCLVGM  286 (364)
Q Consensus       234 ---------~~--~~~~~~----~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l---~~~G~~v~~g~  286 (364)
                               +.  ...++.    ....++.+..+..+|.++.++|++.++.-++..+   .+.-+++.+..
T Consensus       170 ~~~~~~~~~~~~~~~~~~~ag~~t~~~EI~~ql~~~~d~vv~~vG~GG~~~Gi~~~lk~~~~~~kii~vep  240 (355)
T d1jbqa_         170 NEIPNSHILDQYRNASNPLAHYDTTADEILQQCDGKLDMLVASVGTGGTITGIARKLKEKCPGCRIIGVDP  240 (355)
T ss_dssp             HHSTTEECCCTTTCTHHHHHHHHTHHHHHHHHHTTCCCEEEEECSSSHHHHHHHHHHHHHCTTCEEEEEEE
T ss_pred             HhccccccccccCcccchhhhcccchhhhhhhcCCCCCeeEecccCCchHHHHHHHHhhcCCcceEEeecc
Confidence                     00  011111    1123333334567999999999876665544444   55677776653

>d1im8a_ c.66.1.14 (A:) Hypothetical protein HI0319 (YecO) {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Hypothetical protein HI0319 (YecO)
domain: Hypothetical protein HI0319 (YecO)
species: Haemophilus influenzae [TaxId: 727]

Probab=93.72  E-value=0.2  Score=39.89  Aligned_cols=96  Identities=10%  Similarity=0.137  Sum_probs=62.1

Q ss_pred             CCCCCCEEEEEcCCHHHHHHHHHHHH---CCCCEEEEEecChhHHHHHHHc----CCCe-EEecCCCcccHHHHHHHHHH
Q 017916          178 NIGPETNVLIMGAGPIGLVTMLGARA---FGAPRIVIVDVDDYRLSVAKEL----GADN-IVKVSTNLQDIAEEVEKIQK  249 (364)
Q Consensus       178 ~~~~g~~VLI~Gag~~G~~ai~la~~---~g~~~vv~~~~~~~~~~~~~~l----g~~~-~~~~~~~~~~~~~~i~~~~~  249 (364)
                      .++++.+||-.|+|. |..+..+++.   .++ .|+++|.+++-.+.+++.    +... +........++         
T Consensus        36 ~~~~~~~vLDlGCGt-G~~~~~l~~~~~~~~~-~v~giD~S~~ml~~A~~~~~~~~~~~~~~~~~~d~~~~---------  104 (225)
T d1im8a_          36 FVTADSNVYDLGCSR-GAATLSARRNINQPNV-KIIGIDNSQPMVERCRQHIAAYHSEIPVEILCNDIRHV---------  104 (225)
T ss_dssp             HCCTTCEEEEESCTT-CHHHHHHHHTCCCSSC-EEEEECSCHHHHHHHHHHHHTSCCSSCEEEECSCTTTC---------
T ss_pred             hcCCCCEEEEeccch-hhHHHHHHHhhcCCCC-ceEEeCCCHHHHHHHHHHhHhhcccchhhhccchhhcc---------
Confidence            368999999998754 6666777765   355 799999999988887652    3221 11111111110         


Q ss_pred             HcCCCccEEEECCC--------CHHHHHHHHHhcccCCEEEEEc
Q 017916          250 AMGTGIDVSFDCAG--------FNKTMSTALSATRAGGKVCLVG  285 (364)
Q Consensus       250 ~~~~~~d~vid~~g--------~~~~~~~~~~~l~~~G~~v~~g  285 (364)
                       ....+|+++....        -...++.+.+.|+|+|.++...
T Consensus       105 -~~~~~d~i~~~~~l~~~~~~d~~~~l~~i~~~LkpgG~li~~~  147 (225)
T d1im8a_         105 -EIKNASMVILNFTLQFLPPEDRIALLTKIYEGLNPNGVLVLSE  147 (225)
T ss_dssp             -CCCSEEEEEEESCGGGSCGGGHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             -ccccceeeEEeeeccccChhhHHHHHHHHHHhCCCCceeeccc
Confidence             1245677665322        1257889999999999999865

>d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Zymomonas mobilis [TaxId: 542]

Probab=93.66  E-value=0.46  Score=35.10  Aligned_cols=98  Identities=21%  Similarity=0.243  Sum_probs=62.6

Q ss_pred             CEEEEEcC-CHHHHHHHHHHHHC--CCCEEEEEecChhH---HHHHHHcCCCeEEecCCCcccHHHHHHHHH--------
Q 017916          183 TNVLIMGA-GPIGLVTMLGARAF--GAPRIVIVDVDDYR---LSVAKELGADNIVKVSTNLQDIAEEVEKIQ--------  248 (364)
Q Consensus       183 ~~VLI~Ga-g~~G~~ai~la~~~--g~~~vv~~~~~~~~---~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~--------  248 (364)
                      .+|.|.|+ |.+|..+..+.+..  .+ .|+++.....-   .+.++++.+..+...+...   .+.++...        
T Consensus         3 K~I~IlGsTGSIG~~tL~Vi~~~~d~f-~v~~lsa~~N~~~L~~q~~ef~Pk~v~i~d~~~---~~~l~~~~~~~~~~v~   78 (150)
T d1r0ka2           3 RTVTVLGATGSIGHSTLDLIERNLDRY-QVIALTANRNVKDLADAAKRTNAKRAVIADPSL---YNDLKEALAGSSVEAA   78 (150)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTGGGE-EEEEEEESSCHHHHHHHHHHTTCSEEEESCGGG---HHHHHHHTTTCSSEEE
T ss_pred             cEEEEECCCcHHHHHHHHHHHcCCCCc-EEEEEEeCCCHHHHHHHHHhhccccceeccHHH---HHHHHHHhhhcccccc
Confidence            68999998 99999999999876  45 45555554332   3456678888776543221   11111110        


Q ss_pred             -------HHcCCCccEEEECCCCHHHHHHHHHhcccCCEEEEE
Q 017916          249 -------KAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLV  284 (364)
Q Consensus       249 -------~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~  284 (364)
                             .....++|+++.+..+...+...+.+++.+-++.+.
T Consensus        79 ~g~~~l~~~~~~~~D~vv~Ai~G~~GL~~tl~ai~~gk~iaLA  121 (150)
T d1r0ka2          79 AGADALVEAAMMGADWTMAAIIGCAGLKATLAAIRKGKTVALA  121 (150)
T ss_dssp             ESHHHHHHHHTSCCSEEEECCCSGGGHHHHHHHHHTTSEEEEC
T ss_pred             cCccchheecccccceeeeecCchhHHHHHHHHHhcCCEEEEe
Confidence                   111346888888866677778888888877665543

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

Probab=93.64  E-value=0.11  Score=43.09  Aligned_cols=36  Identities=19%  Similarity=0.158  Sum_probs=26.4

Q ss_pred             EEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHH
Q 017916          185 VLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLS  220 (364)
Q Consensus       185 VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~  220 (364)
                      +||+|+ +++|.+.++.+...|+++++...+++++.+
T Consensus         5 AlITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~   41 (284)
T d1e7wa_           5 ALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEAN   41 (284)
T ss_dssp             EEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHH
T ss_pred             EEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCCHHHHH
Confidence            477787 999999999999999964444444554443

>d1inla_ c.66.1.17 (A:) Spermidine synthase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Thermotoga maritima [TaxId: 2336]

Probab=93.43  E-value=0.18  Score=42.08  Aligned_cols=96  Identities=19%  Similarity=0.221  Sum_probs=64.5

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCC---------C-eEEecCCCcccHHHHHHHHHH
Q 017916          180 GPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGA---------D-NIVKVSTNLQDIAEEVEKIQK  249 (364)
Q Consensus       180 ~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~---------~-~~~~~~~~~~~~~~~i~~~~~  249 (364)
                      ....+|||.|+|. |..+-.+++..+.+.|.+++-+++-.+.++++-.         . .++.     .|..+    +..
T Consensus        88 ~~pk~VLiiGgG~-G~~~r~~l~~~~~~~i~~VEIDp~Vi~~a~~~~~~~~~~~~d~rv~v~~-----~Da~~----~l~  157 (295)
T d1inla_          88 PNPKKVLIIGGGD-GGTLREVLKHDSVEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVI-----ANGAE----YVR  157 (295)
T ss_dssp             SSCCEEEEEECTT-CHHHHHHTTSTTCSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEE-----SCHHH----HGG
T ss_pred             CCCceEEEecCCc-hHHHHHHHhcCCCceEEEecCCHHHHHHHHHHHHhhcccccCCCcEEEh-----hhHHH----HHh
Confidence            3457999998754 4566677777777789999999988888876321         1 1221     23333    333


Q ss_pred             HcCCCccEEE-ECCC----------CHHHHHHHHHhcccCCEEEEEc
Q 017916          250 AMGTGIDVSF-DCAG----------FNKTMSTALSATRAGGKVCLVG  285 (364)
Q Consensus       250 ~~~~~~d~vi-d~~g----------~~~~~~~~~~~l~~~G~~v~~g  285 (364)
                      .....+|+|| |+..          +.+.++.+.++|+++|.++.-.
T Consensus       158 ~~~~~yDvIi~D~~dp~~~~~~~L~t~efy~~~~~~L~~~Gi~v~q~  204 (295)
T d1inla_         158 KFKNEFDVIIIDSTDPTAGQGGHLFTEEFYQACYDALKEDGVFSAET  204 (295)
T ss_dssp             GCSSCEEEEEEEC----------CCSHHHHHHHHHHEEEEEEEEEEC
T ss_pred             cCCCCCCEEEEcCCCCCcCchhhhccHHHHHHHHhhcCCCcEEEEec
Confidence            3467899987 4321          2467888999999999998764

>d1cf2o1 c.2.1.3 (O:1-138,O:304-336) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Methanothermus fervidus [TaxId: 2180]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Methanothermus fervidus [TaxId: 2180]

Probab=93.31  E-value=0.47  Score=35.97  Aligned_cols=100  Identities=18%  Similarity=0.184  Sum_probs=60.6

Q ss_pred             EEEEEcCCHHHHHHHHHHHHCC-CCEEEEEecC-hhHHHHHHHcCCCeEEecCCCcccHHH-------HHHHHHHHcCCC
Q 017916          184 NVLIMGAGPIGLVTMLGARAFG-APRIVIVDVD-DYRLSVAKELGADNIVKVSTNLQDIAE-------EVEKIQKAMGTG  254 (364)
Q Consensus       184 ~VLI~Gag~~G~~ai~la~~~g-~~~vv~~~~~-~~~~~~~~~lg~~~~~~~~~~~~~~~~-------~i~~~~~~~~~~  254 (364)
                      +|.|.|-|-+|..+.+.+...+ .+.+.+-+.+ ......+..++.+...........+.+       ....+    -.+
T Consensus         3 ~VgINGfGRIGR~v~R~l~~~~di~vvaInd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~g~~~~~----~~~   78 (171)
T d1cf2o1           3 AVAINGYGTVGKRVADAIAQQDDMKVIGVSKTRPDFEARMALKKGYDLYVAIPERVKLFEKAGIEVAGTVDDM----LDE   78 (171)
T ss_dssp             EEEEECCSHHHHHHHHHHHTSSSEEEEEEEESSCSHHHHHHHHTTCCEEESSGGGHHHHHHTTCCCCEEHHHH----HHT
T ss_pred             EEEEEcCcHHHHHHHHHHHhCCCceEEEEecCCcHHHHHHHHhcCCceEecccccceeecccCcccCCChhHh----hcC
Confidence            6889999999999999876654 4333333333 344455556665543322111111110       01111    136


Q ss_pred             ccEEEECCCCHHHHHHHHHhcccCCEEEEEcCC
Q 017916          255 IDVSFDCAGFNKTMSTALSATRAGGKVCLVGMG  287 (364)
Q Consensus       255 ~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~  287 (364)
                      +|+|+||+|.......+-.++..+-+.+..+..
T Consensus        79 vDvViEcTG~f~~~~~~~~hl~~G~K~vi~~~~  111 (171)
T d1cf2o1          79 ADIVIDCTPEGIGAKNLKMYKEKGIKAIFQGGE  111 (171)
T ss_dssp             CSEEEECCSTTHHHHHHHHHHHTTCEEEECTTS
T ss_pred             CCEEEEccCCCCCHHHHHHHHHcCCCEEEECCC
Confidence            999999999877777888889888888776543

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=93.28  E-value=0.14  Score=40.68  Aligned_cols=72  Identities=17%  Similarity=0.070  Sum_probs=44.0

Q ss_pred             CEEEEEcC-CHHHHHHHHHHHHCCCCE-EEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcCCCccEEEE
Q 017916          183 TNVLIMGA-GPIGLVTMLGARAFGAPR-IVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  260 (364)
Q Consensus       183 ~~VLI~Ga-g~~G~~ai~la~~~g~~~-vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid  260 (364)
                      .+|||+|+ |.+|...+..+...|.+. ++...+++++...+.. +... +..+.  .+.. .+.+..    .++|.++.
T Consensus         4 ~tVlVtGatG~iG~~l~~~Ll~~g~~v~v~~~~R~~~~~~~~~~-~~~~-~~~d~--~~~~-~~~~~~----~~~d~vi~   74 (252)
T d2q46a1           4 PTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKIGG-EADV-FIGDI--TDAD-SINPAF----QGIDALVI   74 (252)
T ss_dssp             CEEEEESTTSTTHHHHHHHHHHTTTTCEEEEEESCHHHHHHTTC-CTTE-EECCT--TSHH-HHHHHH----TTCSEEEE
T ss_pred             CEEEEECCccHHHHHHHHHHHHCCCcEEEEEEcCCHHHHHhccC-CcEE-EEeee--cccc-cccccc----ccceeeEE
Confidence            48999998 999999999999888753 4555566655443221 2332 22221  2222 222222    46899998


Q ss_pred             CCC
Q 017916          261 CAG  263 (364)
Q Consensus       261 ~~g  263 (364)
                      +++
T Consensus        75 ~a~   77 (252)
T d2q46a1          75 LTS   77 (252)
T ss_dssp             CCC
T ss_pred             EEe
Confidence            875

>d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Ketopantoate reductase PanE
species: Escherichia coli [TaxId: 562]

Probab=93.24  E-value=0.031  Score=42.39  Aligned_cols=91  Identities=9%  Similarity=0.046  Sum_probs=53.4

Q ss_pred             EEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCe--EEecCCCcccHHHHHHHHHHHcCCCccEEEEC
Q 017916          184 NVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADN--IVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDC  261 (364)
Q Consensus       184 ~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~--~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid~  261 (364)
                      +|+|.|+|++|.+....+...|. .|..+++++++.+.....+...  ....  ...+..+.   .     ..+|++|-+
T Consensus         2 kI~IiGaG~iG~~~a~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~---~-----~~~D~iii~   70 (167)
T d1ks9a2           2 KITVLGCGALGQLWLTALCKQGH-EVQGWLRVPQPYCSVNLVETDGSIFNES--LTANDPDF---L-----ATSDLLLVT   70 (167)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTC-EEEEECSSCCSEEEEEEECTTSCEEEEE--EEESCHHH---H-----HTCSEEEEC
T ss_pred             EEEEECcCHHHHHHHHHHHHCCC-ceEEEEcCHHHhhhhccccCCccccccc--cccchhhh---h-----cccceEEEe
Confidence            79999999999988888888898 5677766665433222222211  1000  00111111   1     368999998


Q ss_pred             CCCHH---HHHHHHHhcccCCEEEEEc
Q 017916          262 AGFNK---TMSTALSATRAGGKVCLVG  285 (364)
Q Consensus       262 ~g~~~---~~~~~~~~l~~~G~~v~~g  285 (364)
                      +-+..   .++.+...++++..++.+.
T Consensus        71 vka~~~~~~~~~l~~~~~~~~~Iv~~q   97 (167)
T d1ks9a2          71 LKAWQVSDAVKSLASTLPVTTPILLIH   97 (167)
T ss_dssp             SCGGGHHHHHHHHHTTSCTTSCEEEEC
T ss_pred             ecccchHHHHHhhccccCcccEEeecc
Confidence            88542   3334445556667677664

>d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]

Probab=93.10  E-value=0.62  Score=34.75  Aligned_cols=101  Identities=21%  Similarity=0.205  Sum_probs=71.4

Q ss_pred             HHHHH-HH-cCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHH
Q 017916          170 GLHAC-RR-ANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKI  247 (364)
Q Consensus       170 a~~~l-~~-~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~  247 (364)
                      .+.++ +. ..+-.|.+++|.|=|-+|.-.++-+|.+|+ .|++++.++-+.-.+.-=|.. +..           +.+.
T Consensus         9 ~~d~i~r~t~~~laGk~vvV~GYG~vGrG~A~~~rg~Ga-~V~V~E~DPi~alqA~mdGf~-v~~-----------~~~a   75 (163)
T d1v8ba1           9 LPDGLMRATDFLISGKIVVICGYGDVGKGCASSMKGLGA-RVYITEIDPICAIQAVMEGFN-VVT-----------LDEI   75 (163)
T ss_dssp             HHHHHHHHHCCCCTTSEEEEECCSHHHHHHHHHHHHHTC-EEEEECSCHHHHHHHHTTTCE-ECC-----------HHHH
T ss_pred             HHHHHHHHhCceecCCEEEEecccccchhHHHHHHhCCC-EEEEEecCchhhHHHHhcCCc-cCc-----------hhHc
Confidence            34455 33 335689999999999999999999999999 789999888554333322332 221           2222


Q ss_pred             HHHcCCCccEEEECCCCHHH-HHHHHHhcccCCEEEEEcCC
Q 017916          248 QKAMGTGIDVSFDCAGFNKT-MSTALSATRAGGKVCLVGMG  287 (364)
Q Consensus       248 ~~~~~~~~d~vid~~g~~~~-~~~~~~~l~~~G~~v~~g~~  287 (364)
                          -...|+++-++|..+. -.+-++.|+.+..+...|-.
T Consensus        76 ----~~~aDi~vTaTGn~~vI~~~h~~~MKdgaIl~N~GHf  112 (163)
T d1v8ba1          76 ----VDKGDFFITCTGNVDVIKLEHLLKMKNNAVVGNIGHF  112 (163)
T ss_dssp             ----TTTCSEEEECCSSSSSBCHHHHTTCCTTCEEEECSST
T ss_pred             ----cccCcEEEEcCCCCccccHHHHHHhhCCeEEEecccc
Confidence                2568999999997653 34678999999888777643

>d2fyta1 c.66.1.6 (A:238-548) Protein arginine N-methyltransferase 3, PRMT3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Protein arginine N-methyltransferase 3, PRMT3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.08  E-value=0.15  Score=42.90  Aligned_cols=96  Identities=20%  Similarity=0.323  Sum_probs=54.2

Q ss_pred             cCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHH---HHHcCCC-eEEecCCCcccHHHHHHHHHHHcC
Q 017916          177 ANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSV---AKELGAD-NIVKVSTNLQDIAEEVEKIQKAMG  252 (364)
Q Consensus       177 ~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~---~~~lg~~-~~~~~~~~~~~~~~~i~~~~~~~~  252 (364)
                      ..+.+|++||-.|+| .|..++.+|+ .|++.|++++.++.-...   .++.+.. .+........++.        ...
T Consensus        31 ~~~~~~~~VLDiGcG-~G~lsl~aa~-~Ga~~V~aid~s~~~~~a~~~~~~~~~~~~i~~~~~~~~~l~--------~~~  100 (311)
T d2fyta1          31 PHIFKDKVVLDVGCG-TGILSMFAAK-AGAKKVLGVDQSEILYQAMDIIRLNKLEDTITLIKGKIEEVH--------LPV  100 (311)
T ss_dssp             GGGTTTCEEEEETCT-TSHHHHHHHH-TTCSEEEEEESSTHHHHHHHHHHHTTCTTTEEEEESCTTTSC--------CSC
T ss_pred             cccCCcCEEEEECCC-CCHHHHHHHH-cCCCEEEEEeCHHHHHHHHHHHHHhCCCccceEEEeeHHHhc--------Ccc
Confidence            456789999999875 3555555555 588899999988754322   2333432 2211111111110        113


Q ss_pred             CCccEEEEC-CCC----H----HHHHHHHHhcccCCEEE
Q 017916          253 TGIDVSFDC-AGF----N----KTMSTALSATRAGGKVC  282 (364)
Q Consensus       253 ~~~d~vid~-~g~----~----~~~~~~~~~l~~~G~~v  282 (364)
                      ..+|+|+.- .+.    .    ..+...-+.|+|+|+++
T Consensus       101 ~~~D~Ivse~~~~~~~~e~~~~~~~~a~~~~Lkp~G~ii  139 (311)
T d2fyta1         101 EKVDVIISEWMGYFLLFESMLDSVLYAKNKYLAKGGSVY  139 (311)
T ss_dssp             SCEEEEEECCCBTTBTTTCHHHHHHHHHHHHEEEEEEEE
T ss_pred             ccceEEEEeeeeeecccccccHHHHHHHHhcCCCCcEEe
Confidence            579999852 221    1    22333446899999886

>d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Streptococcus pyogenes [TaxId: 1314]

Probab=93.07  E-value=0.29  Score=36.35  Aligned_cols=85  Identities=12%  Similarity=0.145  Sum_probs=59.4

Q ss_pred             EEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHH-HHcCCCeEEecCCCcccHHHHHHHHHHHcCCCccEEEECC
Q 017916          184 NVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA-KELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCA  262 (364)
Q Consensus       184 ~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~-~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid~~  262 (364)
                      +|.+.|+|.+|.+.+.-....|. .+++.+++.++.+.+ +++|.....       +.    .+..    ...|+||=|+
T Consensus         2 kIg~IG~G~mG~al~~~l~~~~~-~i~v~~r~~~~~~~l~~~~g~~~~~-------~~----~~~~----~~~dvIilav   65 (152)
T d2ahra2           2 KIGIIGVGKMASAIIKGLKQTPH-ELIISGSSLERSKEIAEQLALPYAM-------SH----QDLI----DQVDLVILGI   65 (152)
T ss_dssp             EEEEECCSHHHHHHHHHHTTSSC-EEEEECSSHHHHHHHHHHHTCCBCS-------SH----HHHH----HTCSEEEECS
T ss_pred             EEEEEeccHHHHHHHHHHHhCCC-eEEEEcChHHhHHhhccccceeeec-------hh----hhhh----hccceeeeec
Confidence            57888999999987775555676 677787888776654 667865321       11    1221    2579999998


Q ss_pred             CCHHHHHHHHHhcccCCEEEEEc
Q 017916          263 GFNKTMSTALSATRAGGKVCLVG  285 (364)
Q Consensus       263 g~~~~~~~~~~~l~~~G~~v~~g  285 (364)
                      - +......++.++++..++.+.
T Consensus        66 k-p~~~~~vl~~l~~~~~iis~~   87 (152)
T d2ahra2          66 K-PQLFETVLKPLHFKQPIISMA   87 (152)
T ss_dssp             C-GGGHHHHHTTSCCCSCEEECC
T ss_pred             c-hHhHHHHhhhcccceeEeccc
Confidence            7 677788888888877766553

>d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=92.94  E-value=0.74  Score=34.29  Aligned_cols=87  Identities=15%  Similarity=0.145  Sum_probs=58.7

Q ss_pred             EEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcCCCccEEEECCC
Q 017916          184 NVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAG  263 (364)
Q Consensus       184 ~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid~~g  263 (364)
                      +|.+.|.|.+|...+.-+...|+ .|.+.+++.++.+.+...+.....       +    ..+.    ....|+++-|+.
T Consensus         3 kIg~IGlG~MG~~iA~~L~~~g~-~v~~~d~~~~~~~~~~~~~~~~~~-------~----~~e~----~~~~diii~~v~   66 (162)
T d3cuma2           3 QIAFIGLGHMGAPMATNLLKAGY-LLNVFDLVQSAVDGLVAAGASAAR-------S----ARDA----VQGADVVISMLP   66 (162)
T ss_dssp             EEEEECCSTTHHHHHHHHHHTTC-EEEEECSSHHHHHHHHHTTCEECS-------S----HHHH----HTSCSEEEECCS
T ss_pred             EEEEEEEHHHHHHHHHHHHHCCC-eEEEEECchhhhhhhhhhhccccc-------h----hhhh----ccccCeeeeccc
Confidence            68888999999877777777798 688999999998888887764321       1    1111    135678888777


Q ss_pred             CHHHHHHH-------HHhcccCCEEEEEcC
Q 017916          264 FNKTMSTA-------LSATRAGGKVCLVGM  286 (364)
Q Consensus       264 ~~~~~~~~-------~~~l~~~G~~v~~g~  286 (364)
                      ..+.....       ...+.++-.++.++.
T Consensus        67 ~~~~~~~v~~~~~~~~~~l~~g~iiid~st   96 (162)
T d3cuma2          67 ASQHVEGLYLDDDGLLAHIAPGTLVLECST   96 (162)
T ss_dssp             CHHHHHHHHHSTTCHHHHSCTTCEEEECSC
T ss_pred             chhhHHHHHhccccccccCCCCCEEEECCC
Confidence            66554443       334556666666653

>d1nvmb1 c.2.1.3 (B:1-131,B:287-312) Acetaldehyde dehydrogenase (acylating) {Pseudomonas sp. [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Acetaldehyde dehydrogenase (acylating)
species: Pseudomonas sp. [TaxId: 306]

Probab=92.93  E-value=0.62  Score=34.68  Aligned_cols=93  Identities=22%  Similarity=0.281  Sum_probs=54.7

Q ss_pred             CEEEEEcCCHHHH-HHHHHHHHCCCCEEEEE-ecCh--hHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHH-cCCCccE
Q 017916          183 TNVLIMGAGPIGL-VTMLGARAFGAPRIVIV-DVDD--YRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKA-MGTGIDV  257 (364)
Q Consensus       183 ~~VLI~Gag~~G~-~ai~la~~~g~~~vv~~-~~~~--~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~d~  257 (364)
                      -+|.|.|+|.+|. ..+++.+....-.++.+ +++.  .+..+.+++|.....   .   .    +..+.+. .-.++|+
T Consensus         5 irvaIIGaG~ig~~~~~~~l~~~~~~el~avas~~~~~~~~~~a~~~~i~~~~---~---~----~d~l~~~~~~~~iDi   74 (157)
T d1nvmb1           5 LKVAIIGSGNIGTDLMIKVLRNAKYLEMGAMVGIDAASDGLARAQRMGVTTTY---A---G----VEGLIKLPEFADIDF   74 (157)
T ss_dssp             EEEEEECCSHHHHHHHHHHHHHCSSEEEEEEECSCTTCHHHHHHHHTTCCEES---S---H----HHHHHHSGGGGGEEE
T ss_pred             cEEEEEcCcHHHHHHHHHHHhhCCcceEEEEEecchhccchhhhhhcCCcccc---c---c----eeeeeecccccccCE
Confidence            4789999999986 56677776543344444 4443  345677888876421   1   1    1222211 1246999


Q ss_pred             EEECCCCHHHHHHH--HHhcccCCEEEEEc
Q 017916          258 SFDCAGFNKTMSTA--LSATRAGGKVCLVG  285 (364)
Q Consensus       258 vid~~g~~~~~~~~--~~~l~~~G~~v~~g  285 (364)
                      ||+++..+.+....  .+.+..|-.+++..
T Consensus        75 Vf~ATpag~h~~~~~~~~aa~~G~~VID~s  104 (157)
T d1nvmb1          75 VFDATSASAHVQNEALLRQAKPGIRLIDLT  104 (157)
T ss_dssp             EEECSCHHHHHHHHHHHHHHCTTCEEEECS
T ss_pred             EEEcCCchhHHHhHHHHHHHHcCCEEEEcc
Confidence            99998755565544  34455555565554

>d1dusa_ c.66.1.4 (A:) Hypothetical protein MJ0882 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Hypothetical protein MJ0882
domain: Hypothetical protein MJ0882
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=92.82  E-value=0.31  Score=37.77  Aligned_cols=99  Identities=19%  Similarity=0.302  Sum_probs=61.2

Q ss_pred             HHHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHH----cCCC--eEEecCCCcccHHHHHHHH
Q 017916          174 CRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKE----LGAD--NIVKVSTNLQDIAEEVEKI  247 (364)
Q Consensus       174 l~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~----lg~~--~~~~~~~~~~~~~~~i~~~  247 (364)
                      ++.....++++||=.|+|. |..++.+++ .+. .+.+++.++...+.+++    .+..  .+.....   |+.+.+   
T Consensus        45 i~~l~~~~~~~VLDiGcG~-G~~~~~la~-~~~-~v~~iD~s~~~i~~a~~n~~~~~l~~~~i~~~~~---d~~~~~---  115 (194)
T d1dusa_          45 VENVVVDKDDDILDLGCGY-GVIGIALAD-EVK-STTMADINRRAIKLAKENIKLNNLDNYDIRVVHS---DLYENV---  115 (194)
T ss_dssp             HHHCCCCTTCEEEEETCTT-SHHHHHHGG-GSS-EEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEEC---STTTTC---
T ss_pred             HHhCCcCCCCeEEEEeecC-ChhHHHHHh-hcc-ccceeeeccccchhHHHHHHHhCCccceEEEEEc---chhhhh---
Confidence            3667788999999998644 555666665 344 78999999887777654    2332  1111111   111101   


Q ss_pred             HHHcCCCccEEEEC----CCC---HHHHHHHHHhcccCCEEEEE
Q 017916          248 QKAMGTGIDVSFDC----AGF---NKTMSTALSATRAGGKVCLV  284 (364)
Q Consensus       248 ~~~~~~~~d~vid~----~g~---~~~~~~~~~~l~~~G~~v~~  284 (364)
                         ..+.+|+|+..    .+.   ...++.+.+.|+|+|+++..
T Consensus       116 ---~~~~fD~Ii~~~p~~~~~~~~~~~l~~~~~~LkpgG~l~i~  156 (194)
T d1dusa_         116 ---KDRKYNKIITNPPIRAGKEVLHRIIEEGKELLKDNGEIWVV  156 (194)
T ss_dssp             ---TTSCEEEEEECCCSTTCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             ---ccCCceEEEEcccEEecchhhhhHHHHHHHhcCcCcEEEEE
Confidence               14579999862    221   23467788999999988653

>d2bhsa1 c.79.1.1 (A:2-293) O-acetylserine sulfhydrylase (Cysteine synthase) {Escherichia coli, isoform B (CysM) [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Escherichia coli, isoform B (CysM) [TaxId: 562]

Probab=92.75  E-value=1.3  Score=36.41  Aligned_cols=111  Identities=15%  Similarity=0.156  Sum_probs=70.6

Q ss_pred             HHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEe--cChhHHHHHHHcCCCeEEecCC-----------------
Q 017916          175 RRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVD--VDDYRLSVAKELGADNIVKVST-----------------  235 (364)
Q Consensus       175 ~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~--~~~~~~~~~~~lg~~~~~~~~~-----------------  235 (364)
                      +...+.++.+|....+|..|++++..|+.+|.+.++.+.  .++.|.+.++.+|+..++....                 
T Consensus        53 ~~g~~~~~~~vv~aSsGN~g~a~A~~a~~~G~~~~i~~p~~~~~~k~~~~~~~GA~v~~v~~~~~~~~a~~~~~~~~~~~  132 (292)
T d2bhsa1          53 KRGEIKPGDVLIEATSGNTGIALAMIAALKGYRMKLLMPDNMSQERRAAMRAYGAELILVTKEQGMEGARDLALEMANRG  132 (292)
T ss_dssp             HTTSCCTTSEEEEECCSHHHHHHHHHHHHHTCEEEEEEESCCCHHHHHHHHHTTCEEEEECTTTHHHHHHHHHHHHHHHT
T ss_pred             HhCCcCCCceeeeecccchhHHHHHHHHhcCcceEeeeccCchhhhhHHHHHhCCCcceeecccchHHHHHHHhhccccc
Confidence            445666777766667799999999999999997666664  3667888999999874332110                 


Q ss_pred             ---------CcccHHH----HHHHHHHHcCCCccEEEECCCCHHHHHHHHHh---cccCCEEEEEc
Q 017916          236 ---------NLQDIAE----EVEKIQKAMGTGIDVSFDCAGFNKTMSTALSA---TRAGGKVCLVG  285 (364)
Q Consensus       236 ---------~~~~~~~----~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~---l~~~G~~v~~g  285 (364)
                               +...+..    ...++....+..+|+++-++|+..+..-+++.   +.+..+++.+.
T Consensus       133 ~~~~~~~~~~~~~~~~~~~~~a~Ei~~q~~~~~d~vv~~~G~Gg~~~G~~~~~k~~~~~~~i~~Ve  198 (292)
T d2bhsa1         133 EGKLLDQFNNPDNPYAHYTTTGPEIWQQTGGRITHFVSSMGTTGTITGVSRFMREQSKPVTIVGLQ  198 (292)
T ss_dssp             SSEECCTTTCTHHHHHHHHTHHHHHHHHTTTCCCEEEEECSSSHHHHHHHHHHHTSSSCCEEEEEE
T ss_pred             cccccCCCchhcchhhHHHHHHHHhHHhcCCCCCcccccCCCccchhhhhhhhhhccCcceEEEec
Confidence                     0111111    11223233456789999988876655544444   45667776664

>d2i6ga1 c.66.1.44 (A:1-198) Putative methyltransferase TehB {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: TehB-like
domain: Putative methyltransferase TehB
species: Salmonella typhimurium [TaxId: 90371]

Probab=92.62  E-value=0.52  Score=36.38  Aligned_cols=92  Identities=20%  Similarity=0.238  Sum_probs=59.8

Q ss_pred             CCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHH----cCCCeE--EecCCCcccHHHHHHHHHHHcC
Q 017916          179 IGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKE----LGADNI--VKVSTNLQDIAEEVEKIQKAMG  252 (364)
Q Consensus       179 ~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~----lg~~~~--~~~~~~~~~~~~~i~~~~~~~~  252 (364)
                      +++| +||-.|+| .|..+..+++ .|+ .|++++.+++..+.+++    .+...+  ...+-....           ..
T Consensus        29 ~~~g-rvLDiGcG-~G~~~~~la~-~g~-~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~d~~~~~-----------~~   93 (198)
T d2i6ga1          29 VAPG-RTLDLGCG-NGRNSLYLAA-NGY-DVTAWDKNPASMANLERIKAAEGLDNLQTDLVDLNTLT-----------FD   93 (198)
T ss_dssp             SCSC-EEEEETCT-TSHHHHHHHH-TTC-EEEEEESCHHHHHHHHHHHHHTTCTTEEEEECCTTTCC-----------CC
T ss_pred             CCCC-cEEEECCC-CCHHHHHHHH-Hhh-hhccccCcHHHHHHHHHHhhhccccchhhhheeccccc-----------cc
Confidence            3454 89999986 4777877776 477 68999999987776543    454432  111111101           13


Q ss_pred             CCccEEEECC-----CC---HHHHHHHHHhcccCCEEEEEc
Q 017916          253 TGIDVSFDCA-----GF---NKTMSTALSATRAGGKVCLVG  285 (364)
Q Consensus       253 ~~~d~vid~~-----g~---~~~~~~~~~~l~~~G~~v~~g  285 (364)
                      ..+|+|+...     ..   ...+..+.++|+++|.++...
T Consensus        94 ~~fD~I~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~  134 (198)
T d2i6ga1          94 GEYDFILSTVVMMFLEAQTIPGLIANMQRCTKPGGYNLIVA  134 (198)
T ss_dssp             CCEEEEEEESCGGGSCTTHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred             ccccEEEEeeeeecCCHHHHHHHHHHHHHHcCCCcEEEEEE
Confidence            5799998632     11   247778888999999988764

>d1b7go1 c.2.1.3 (O:1-138,O:301-340) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=92.62  E-value=0.31  Score=37.29  Aligned_cols=98  Identities=18%  Similarity=0.145  Sum_probs=56.9

Q ss_pred             EEEEEcCCHHHHHHHHHHHHC-CCCEEEEE-ecCh-hHHHHHHHcCCCeEEecCCCcccHHH-------HHHHHHHHcCC
Q 017916          184 NVLIMGAGPIGLVTMLGARAF-GAPRIVIV-DVDD-YRLSVAKELGADNIVKVSTNLQDIAE-------EVEKIQKAMGT  253 (364)
Q Consensus       184 ~VLI~Gag~~G~~ai~la~~~-g~~~vv~~-~~~~-~~~~~~~~lg~~~~~~~~~~~~~~~~-------~i~~~~~~~~~  253 (364)
                      +|.|.|-|-+|..+++.+... .. .++++ +..+ .....+...+.......+ ....+.+       .+...    ..
T Consensus         3 KVaINGfGRIGR~v~Ral~~~~di-evVaInd~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~v~g~~~~~----~~   76 (178)
T d1b7go1           3 NVAVNGYGTIGKRVADAIIKQPDM-KLVGVAKTSPNYEAFIAHRRGIRIYVPQQ-SIKKFEESGIPVAGTVEDL----IK   76 (178)
T ss_dssp             EEEEECCSHHHHHHHHHHHTCTTE-EEEEEECSSCSHHHHHHHHTTCCEECCGG-GHHHHHTTTCCCCCCHHHH----HH
T ss_pred             EEEEECCCHHHHHHHHHHHhCCCC-EEEEEECCCCcHHHHHhcccCcceeccCc-cceeccccceecCCchhhh----hh
Confidence            688999999999999998865 44 34444 4333 333333443432211110 0000000       01111    12


Q ss_pred             CccEEEECCCCHHHHHHHHHhcccCCEEEEEcCC
Q 017916          254 GIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMG  287 (364)
Q Consensus       254 ~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~  287 (364)
                      ++|+||||+|.......+-.++..+-+.+..+..
T Consensus        77 ~vDiViecTG~f~~~e~a~~hl~~G~KvIi~~~~  110 (178)
T d1b7go1          77 TSDIVVDTTPNGVGAQYKPIYLQLQRNAIFQGGE  110 (178)
T ss_dssp             HCSEEEECCSTTHHHHHHHHHHHTTCEEEECTTS
T ss_pred             cCCEEEECCCCcCCHHHHHHHHHcCCEEEEECCC
Confidence            5899999999877777788888877778776543

>d1sqga2 c.66.1.38 (A:145-428) Ribosomal RNA small subunit methyltransferase B, RsmB (Sun, Fmu/Fmv), C-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: NOL1/NOP2/sun
domain: Ribosomal RNA small subunit methyltransferase B, RsmB (Sun, Fmu/Fmv), C-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=92.61  E-value=0.7  Score=38.13  Aligned_cols=103  Identities=19%  Similarity=0.221  Sum_probs=63.1

Q ss_pred             HHcCCCCCCEEEEEc-C-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHH----HHcCCCeEEecCCCcccHHHHHHHHH
Q 017916          175 RRANIGPETNVLIMG-A-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA----KELGADNIVKVSTNLQDIAEEVEKIQ  248 (364)
Q Consensus       175 ~~~~~~~g~~VLI~G-a-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~----~~lg~~~~~~~~~~~~~~~~~i~~~~  248 (364)
                      .....++|++||=.- | |+--.   ++|....-..+++.+.+..|...+    +.+|+.......... ....    . 
T Consensus        96 ~~L~~~~g~~vLD~CAaPGgKt~---~la~l~~~~~i~a~d~~~~R~~~l~~~~~r~g~~~~~~~~~~~-~~~~----~-  166 (284)
T d1sqga2          96 TWLAPQNGEHILDLCAAPGGKTT---HILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDGR-YPSQ----W-  166 (284)
T ss_dssp             HHHCCCTTCEEEEESCTTCHHHH---HHHHHCTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEEECCTT-CTHH----H-
T ss_pred             cccCccccceeEeccCccccchh---hhhhhhhhhhhhhhhcchhhhhhHhhhhhcccccceeeecccc-ccch----h-
Confidence            345779999999873 3 44332   444444334789999999887554    567876443322211 1111    1 


Q ss_pred             HHcCCCccEEE-E--CCCCH-------------------------HHHHHHHHhcccCCEEEEEcCC
Q 017916          249 KAMGTGIDVSF-D--CAGFN-------------------------KTMSTALSATRAGGKVCLVGMG  287 (364)
Q Consensus       249 ~~~~~~~d~vi-d--~~g~~-------------------------~~~~~~~~~l~~~G~~v~~g~~  287 (364)
                       .....+|.|+ |  |+|++                         ..+..+++.|++||+++..--+
T Consensus       167 -~~~~~fd~IL~DaPCSg~G~~rr~p~~~~~~~~~~~~~l~~lQ~~iL~~a~~~lk~gG~lvYsTCS  232 (284)
T d1sqga2         167 -CGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCS  232 (284)
T ss_dssp             -HTTCCEEEEEEECCCCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEEEEEEEEESC
T ss_pred             -cccccccEEEEeccccccCccccccchhhccccchhhHHHHHHHHHHHHHHHhcCCCceEEEeeec
Confidence             1245799876 5  66653                         3666777789999998876543

>d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-lactate dehydrogenase
species: Lactobacillus helveticus [TaxId: 1587]

Probab=92.59  E-value=0.28  Score=38.28  Aligned_cols=87  Identities=18%  Similarity=0.170  Sum_probs=56.2

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcCCCccEEEE
Q 017916          181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  260 (364)
Q Consensus       181 ~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid  260 (364)
                      .|.+|.|.|.|.+|...+++++.+|+ .|++.+........  ..+..    .    .++.+.+        ...|+++.
T Consensus        42 ~gk~vgIiG~G~IG~~va~~l~~fg~-~V~~~d~~~~~~~~--~~~~~----~----~~l~~~l--------~~sDii~~  102 (197)
T d1j4aa1          42 RDQVVGVVGTGHIGQVFMQIMEGFGA-KVITYDIFRNPELE--KKGYY----V----DSLDDLY--------KQADVISL  102 (197)
T ss_dssp             GGSEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSCCHHHH--HTTCB----C----SCHHHHH--------HHCSEEEE
T ss_pred             cCCeEEEecccccchhHHHhHhhhcc-cccccCcccccccc--cceee----e----ccccccc--------cccccccc
Confidence            47899999999999999999999999 67777755433222  11211    1    2232222        13688877


Q ss_pred             CCCC-HH---HH-HHHHHhcccCCEEEEEcC
Q 017916          261 CAGF-NK---TM-STALSATRAGGKVCLVGM  286 (364)
Q Consensus       261 ~~g~-~~---~~-~~~~~~l~~~G~~v~~g~  286 (364)
                      ++.- ++   .+ ...++.|+++..++..+.
T Consensus       103 ~~plt~~T~~li~~~~l~~mk~~a~lIN~sR  133 (197)
T d1j4aa1         103 HVPDVPANVHMINDESIAKMKQDVVIVNVSR  133 (197)
T ss_dssp             CSCCCGGGTTCBSHHHHHHSCTTEEEEECSC
T ss_pred             cCCccccccccccHHHHhhhCCccEEEecCc
Confidence            6531 11   11 356788888888887754

>d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=92.44  E-value=0.7  Score=33.05  Aligned_cols=30  Identities=23%  Similarity=0.200  Sum_probs=25.0

Q ss_pred             EEEEEcC-CHHHHHHHHHHHHCCCCEEEEEe
Q 017916          184 NVLIMGA-GPIGLVTMLGARAFGAPRIVIVD  213 (364)
Q Consensus       184 ~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~  213 (364)
                      +|.|+|+ |-.|++..+++...+.+.+..++
T Consensus         2 ki~i~G~~GrMG~~i~~~~~~~~~~l~~~id   32 (128)
T d1vm6a3           2 KYGIVGYSGRMGQEIQKVFSEKGHELVLKVD   32 (128)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEEE
T ss_pred             EEEEECCCCHHHHHHHHHHhcCCCeEEEEEC
Confidence            6899998 99999999999999986555554

>d1zh8a1 c.2.1.3 (A:4-131,A:276-328) Hypothetical protein TM0312 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM0312
species: Thermotoga maritima [TaxId: 2336]

Probab=92.38  E-value=1.5  Score=33.11  Aligned_cols=131  Identities=11%  Similarity=0.068  Sum_probs=75.9

Q ss_pred             EEEEEcCCHHHHH-HHHHHHHCC--CCEEEEEecChhHHHH-HHHcCCCeEEecCCCcccHHHHHHHHHHHcCCCccEEE
Q 017916          184 NVLIMGAGPIGLV-TMLGARAFG--APRIVIVDVDDYRLSV-AKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF  259 (364)
Q Consensus       184 ~VLI~Gag~~G~~-ai~la~~~g--~~~vv~~~~~~~~~~~-~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vi  259 (364)
                      +|.|.|.|..|.- .+...+..+  ++.+.+++.+.++.+. .++++...+..      ++.+    +..  ...+|+|+
T Consensus         5 rigiIG~G~~g~~~h~~~l~~~~~~~~i~~v~d~~~~~~~~~~~~~~~~~~~~------~~~e----ll~--~~~id~v~   72 (181)
T d1zh8a1           5 RLGIVGCGIAARELHLPALKNLSHLFEITAVTSRTRSHAEEFAKMVGNPAVFD------SYEE----LLE--SGLVDAVD   72 (181)
T ss_dssp             EEEEECCSHHHHHTHHHHHHTTTTTEEEEEEECSSHHHHHHHHHHHSSCEEES------CHHH----HHH--SSCCSEEE
T ss_pred             EEEEEcCCHHHHHHHHHHHHhCCCCeEEEEEEeccHhhhhhhhccccccceee------eeec----ccc--ccccceee
Confidence            6789999988864 456566544  3334455666666554 56677655431      3332    322  45799999


Q ss_pred             ECCCCHHHHHHHHHhcccCCEEEEEcCCCCCcccc---chhhh-hcCcEEEeeccC-----CCcHHHHHHHHHcCCC
Q 017916          260 DCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVP---LTPAA-VREVDVVGVFRY-----KNTWPLCLELLRSGKI  327 (364)
Q Consensus       260 d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~---~~~~~-~~~~~~~~~~~~-----~~~~~~~~~~l~~g~~  327 (364)
                      -|+....+...+..++.. |.-+.+.-+.....-.   +..+. .++..+.-.+..     ...+.++.+++++|++
T Consensus        73 I~tp~~~h~~~~~~al~~-gk~V~~EKPl~~~~~e~~~l~~~~~~~~~~~~v~~~~R~~~~~~~~~~~~~~i~~G~i  148 (181)
T d1zh8a1          73 LTLPVELNLPFIEKALRK-GVHVICEKPISTDVETGKKVVELSEKSEKTVYIAENFRENSYQKEFEDFYQVVAEGKP  148 (181)
T ss_dssp             ECCCGGGHHHHHHHHHHT-TCEEEEESSSSSSHHHHHHHHHHHHHCSSCEEEECGGGCCHHHHHHHHHHHHHHSCCC
T ss_pred             cccccccccccccccccc-chhhhcCCCCcCCHHHHHHHHHHHHHhCCeEEEEeeccccccCHHHHHHHHHHHCCCC
Confidence            998877777778888875 4666665322211111   11122 233333222221     3457788899999987

>d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=92.37  E-value=1.3  Score=31.83  Aligned_cols=30  Identities=23%  Similarity=0.272  Sum_probs=22.3

Q ss_pred             EEEEEcC-CHHHHHHHHHHHH-CCCCEEEEEe
Q 017916          184 NVLIMGA-GPIGLVTMLGARA-FGAPRIVIVD  213 (364)
Q Consensus       184 ~VLI~Ga-g~~G~~ai~la~~-~g~~~vv~~~  213 (364)
                      +|.|.|+ |-+|++.++.... -+.+.+.+++
T Consensus         1 kI~v~Ga~GrMG~~i~~~i~~~~~~~l~~~~d   32 (135)
T d1yl7a1           1 RVGVLGAKGKVGATMVRAVAAADDLTLSAELD   32 (135)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSTTSEEEEEEC
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCCEEEEEEe
Confidence            5889998 9999998888765 5665444444

>d1xvaa_ c.66.1.5 (A:) Glycine N-methyltransferase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Glycine N-methyltransferase
domain: Glycine N-methyltransferase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=92.35  E-value=0.06  Score=45.09  Aligned_cols=102  Identities=18%  Similarity=0.168  Sum_probs=61.2

Q ss_pred             cCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHc----CCCeEE-ecCCCcccHHHHHHHHHHHc
Q 017916          177 ANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKEL----GADNIV-KVSTNLQDIAEEVEKIQKAM  251 (364)
Q Consensus       177 ~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~l----g~~~~~-~~~~~~~~~~~~i~~~~~~~  251 (364)
                      .+.+++.+||-.|+|. |..++.||+. |+ .|++++.+++-.+.+++.    +..... .......++...-  .....
T Consensus        52 l~~~~~~~vLD~GcG~-G~~~~~la~~-g~-~v~gvD~S~~ml~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~  126 (292)
T d1xvaa_          52 LRQHGCHRVLDVACGT-GVDSIMLVEE-GF-SVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWLTLD--KDVPA  126 (292)
T ss_dssp             HHHTTCCEEEESSCTT-SHHHHHHHHT-TC-EEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCGGGHH--HHSCC
T ss_pred             hhhcCCCEEEEecCCC-cHHHHHHHHc-CC-eeeeccCchHHHHHHHHHHHhcccccccceeeeeeccccccc--cccCC
Confidence            3335678999988765 6778888875 87 699999999887776542    211000 0000001111100  11112


Q ss_pred             CCCccEEEECCCC--------------HHHHHHHHHhcccCCEEEE
Q 017916          252 GTGIDVSFDCAGF--------------NKTMSTALSATRAGGKVCL  283 (364)
Q Consensus       252 ~~~~d~vid~~g~--------------~~~~~~~~~~l~~~G~~v~  283 (364)
                      ...+|.|+....+              ...+..+.+.|+|||.++.
T Consensus       127 ~~~fd~v~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~  172 (292)
T d1xvaa_         127 GDGFDAVICLGNSFAHLPDSKGDQSEHRLALKNIASMVRPGGLLVI  172 (292)
T ss_dssp             TTCEEEEEECSSCGGGSCCTTSSSHHHHHHHHHHHHTEEEEEEEEE
T ss_pred             CCCceEEEEecCchhhcCCcccChHHHHHHHHHHHHHcCcCcEEEE
Confidence            4579999864321              1368899999999999886

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

Probab=92.34  E-value=0.14  Score=43.68  Aligned_cols=45  Identities=16%  Similarity=0.130  Sum_probs=35.4

Q ss_pred             CCCCCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHH
Q 017916          178 NIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAK  223 (364)
Q Consensus       178 ~~~~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~  223 (364)
                      -+++|.+|||+|+ |-+|...++.+...|+ .|+++.++.++.+.++
T Consensus         7 ~~~~gk~VlVTG~sGfIGs~l~~~Ll~~G~-~V~~~vR~~~~~~~~~   52 (342)
T d1y1pa1           7 VLPEGSLVLVTGANGFVASHVVEQLLEHGY-KVRGTARSASKLANLQ   52 (342)
T ss_dssp             SSCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHH
T ss_pred             CCCCcCEEEEECCCCHHHHHHHHHHHHCcC-EEEEEeCCchhHHHHH
Confidence            3578999999998 9999999988888899 5667667766655443

>d1y8ca_ c.66.1.43 (A:) Putative methyltransferase CAC2371 {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Putative methyltransferase CAC2371
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=92.26  E-value=0.098  Score=42.40  Aligned_cols=91  Identities=19%  Similarity=0.172  Sum_probs=58.6

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHH----cCCCeEEecCCCcccHHHHHHHHHHHcCCCc
Q 017916          180 GPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKE----LGADNIVKVSTNLQDIAEEVEKIQKAMGTGI  255 (364)
Q Consensus       180 ~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~  255 (364)
                      .++.+||=.|+|. |..+..+++. |. .+++++.|++..+.+++    .+...-+.. .   |.    ..+  ...+.+
T Consensus        36 ~~~~~vLDiGCG~-G~~~~~l~~~-g~-~v~GvD~S~~ml~~A~~~~~~~~~~v~~~~-~---d~----~~~--~~~~~f  102 (246)
T d1y8ca_          36 LVFDDYLDLACGT-GNLTENLCPK-FK-NTWAVDLSQEMLSEAENKFRSQGLKPRLAC-Q---DI----SNL--NINRKF  102 (246)
T ss_dssp             CCTTEEEEETCTT-STTHHHHGGG-SS-EEEEECSCHHHHHHHHHHHHHTTCCCEEEC-C---CG----GGC--CCSCCE
T ss_pred             CCCCeEEEEeCcC-CHHHHHHHHh-CC-ccEeeccchhhhhhccccccccCccceeec-c---ch----hhh--cccccc
Confidence            4567999998764 6677777664 66 68999999988777654    343211111 1   11    111  124579


Q ss_pred             cEEEECCCC------H----HHHHHHHHhcccCCEEEE
Q 017916          256 DVSFDCAGF------N----KTMSTALSATRAGGKVCL  283 (364)
Q Consensus       256 d~vid~~g~------~----~~~~~~~~~l~~~G~~v~  283 (364)
                      |+|+...++      .    ..++.+.++|+|+|.++.
T Consensus       103 D~i~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~~i~  140 (246)
T d1y8ca_         103 DLITCCLDSTNYIIDSDDLKKYFKAVSNHLKEGGVFIF  140 (246)
T ss_dssp             EEEEECTTGGGGCCSHHHHHHHHHHHHTTEEEEEEEEE
T ss_pred             cccceeeeeeeccCCHHHHHHHHHHHHHhCCCCeEEEE
Confidence            999964332      1    367788999999999884

>d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Glycinamide ribonucleotide transformylase PurT, N-domain
species: Escherichia coli [TaxId: 562]

Probab=92.12  E-value=0.12  Score=36.24  Aligned_cols=37  Identities=24%  Similarity=0.522  Sum_probs=30.3

Q ss_pred             CCC-CEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChh
Q 017916          180 GPE-TNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDY  217 (364)
Q Consensus       180 ~~g-~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~  217 (364)
                      .++ .+|.|.|+|.+|.+.++-|+.+|. .+++.+.++.
T Consensus         8 ~~~~~kigIlGgGQL~rMla~aA~~lG~-~v~v~d~~~~   45 (111)
T d1kjqa2           8 RPAATRVMLLGSGELGKEVAIECQRLGV-EVIAVDRYAD   45 (111)
T ss_dssp             STTCCEEEEESCSHHHHHHHHHHHTTTC-EEEEEESSTT
T ss_pred             CCCCCEEEEEeCCHHHHHHHHHHHHCCC-EEEEEcCCCC
Confidence            444 569999999999999999999999 5677776543

>d1ydwa1 c.2.1.3 (A:6-133,A:305-360) Probable oxidoreductase At4g09670 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Probable oxidoreductase At4g09670
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=91.95  E-value=0.55  Score=35.81  Aligned_cols=91  Identities=14%  Similarity=0.054  Sum_probs=59.5

Q ss_pred             EEEEEcCCHHHHHHHHHHHHC-CCCEEEEEecChhHHH-HHHHcCCCe-EEecCCCcccHHHHHHHHHHHcCCCccEEEE
Q 017916          184 NVLIMGAGPIGLVTMLGARAF-GAPRIVIVDVDDYRLS-VAKELGADN-IVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  260 (364)
Q Consensus       184 ~VLI~Gag~~G~~ai~la~~~-g~~~vv~~~~~~~~~~-~~~~lg~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid  260 (364)
                      +|.|.|.|..|...++..+.. +++.+.+.+.+.++.+ +.++++... ...|+    +    ++++..  ...+|+|+-
T Consensus         3 ki~iIG~G~~g~~~~~~l~~~~~~~i~ai~d~~~~~~~~~~~~~~~~~~~~~~~----~----~~~ll~--~~~iD~v~I   72 (184)
T d1ydwa1           3 RIGVMGCADIARKVSRAIHLAPNATISGVASRSLEKAKAFATANNYPESTKIHG----S----YESLLE--DPEIDALYV   72 (184)
T ss_dssp             EEEEESCCTTHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHHTTCCTTCEEES----S----HHHHHH--CTTCCEEEE
T ss_pred             EEEEEcCCHHHHHHHHHHHhCCCCEEEEEEeCCccccccchhccccccceeecC----c----HHHhhh--ccccceeee
Confidence            578889998998887777766 5544445566666644 445666432 11121    2    233332  357999999


Q ss_pred             CCCCHHHHHHHHHhcccCCEEEEEc
Q 017916          261 CAGFNKTMSTALSATRAGGKVCLVG  285 (364)
Q Consensus       261 ~~g~~~~~~~~~~~l~~~G~~v~~g  285 (364)
                      |+....+...+..+|..+ .-+.+.
T Consensus        73 ~tp~~~h~~~~~~~l~~g-~~v~~E   96 (184)
T d1ydwa1          73 PLPTSLHVEWAIKAAEKG-KHILLE   96 (184)
T ss_dssp             CCCGGGHHHHHHHHHTTT-CEEEEC
T ss_pred             cccchhhcchhhhhhhcc-ceeecc
Confidence            998888888888888855 556665

>d1fcja_ c.79.1.1 (A:) O-acetylserine sulfhydrylase (Cysteine synthase) {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Salmonella typhimurium [TaxId: 90371]

Probab=91.95  E-value=2.5  Score=34.71  Aligned_cols=104  Identities=17%  Similarity=0.143  Sum_probs=66.4

Q ss_pred             HHHHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEec--ChhHHHHHHHcCCCeEEec-----------------
Q 017916          173 ACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDV--DDYRLSVAKELGADNIVKV-----------------  233 (364)
Q Consensus       173 ~l~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~--~~~~~~~~~~lg~~~~~~~-----------------  233 (364)
                      +++...++++.+|...++|..|.+++..|+.+|.+.++++..  ++.+...++.+|+.-+..-                 
T Consensus        52 a~~~g~~~~~~~vv~assGn~g~a~A~~a~~~g~~~~i~~p~~~~~~k~~~~~~~ga~v~~~~~~~~~~~~~~~~~~~~~  131 (302)
T d1fcja_          52 AEKRGVLKPGVELVEPTNGNTGIALAYVAAARGYKLTLTMPETMSIERRKLLKALGANLVLTEGAKGMKGAIQKAEEIVA  131 (302)
T ss_dssp             HHHHTCCCTTCEEEEECSSHHHHHHHHHHHHHTCCEEEEEETTSCHHHHHHHHHTTCEEEEECGGGHHHHHHHHHHHHHH
T ss_pred             HHHcCCCCCCceEEEeccccchhHHHHHHHHhccCCceEEeecCcHHHHHHHHHhccceEEeccccccchhhhHHHHHHh
Confidence            445567778877776677999999999999999986666643  5577778888887643211                 


Q ss_pred             ---------CCCccc--HH----HHHHHHHHHcCCCccEEEECCCCHHHHHHHHHhcc
Q 017916          234 ---------STNLQD--IA----EEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATR  276 (364)
Q Consensus       234 ---------~~~~~~--~~----~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~  276 (364)
                               ......  +.    ....++.+..+..+|++|-++|++..+.-.+..++
T Consensus       132 ~~~~~~~~~~~~~~~~~~~~~~~ti~~Ei~e~~~~~~d~vv~~vG~GG~~~Gi~~~lk  189 (302)
T d1fcja_         132 SDPQKYLLLQQFSNPANPEIHEKTTGPEIWEDTDGQVDVFISGVGTGGTLTGVTRYIK  189 (302)
T ss_dssp             TSTTTEEECCTTTCTHHHHHHHHTHHHHHHHHTTTCCCEEEEECSSSHHHHHHHHHHH
T ss_pred             hhccceeccccccccchhHHHHhHHHHHHHHhcCCCCCEEEEcCCCccccccceeeee
Confidence                     000000  00    01122333345578999999998766666555554

>d2avda1 c.66.1.1 (A:44-262) COMT domain-containing protein 1, COMTD1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: COMT-like
domain: COMT domain-containing protein 1, COMTD1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.74  E-value=0.47  Score=37.58  Aligned_cols=104  Identities=20%  Similarity=0.249  Sum_probs=67.5

Q ss_pred             CCCCCEEEEEcCCHHHHHHHHHHHHCCC-CEEEEEecChhHHHHHHH----cCCCeEEecCCCcccHHHHHHHHHHHc-C
Q 017916          179 IGPETNVLIMGAGPIGLVTMLGARAFGA-PRIVIVDVDDYRLSVAKE----LGADNIVKVSTNLQDIAEEVEKIQKAM-G  252 (364)
Q Consensus       179 ~~~g~~VLI~Gag~~G~~ai~la~~~g~-~~vv~~~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~i~~~~~~~-~  252 (364)
                      .....+||-.|.+. |..++.+|+.+.. ..+++++.+++..+.+++    .|....+...  ..+..+.+..+.... .
T Consensus        57 ~~~~k~vLEiGt~~-GyStl~~a~al~~~g~i~tie~~~~~~~~A~~~~~~ag~~~~i~~~--~Gda~e~l~~~~~~~~~  133 (219)
T d2avda1          57 LIQAKKALDLGTFT-GYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLR--LKPALETLDELLAAGEA  133 (219)
T ss_dssp             HTTCCEEEEECCTT-SHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEE--ESCHHHHHHHHHHTTCT
T ss_pred             ccCCCeEEEEechh-hHHHHHHHHhCCCCceEEEEeechhHHHHHHHHHHhcCccceEEEE--Eeehhhcchhhhhhccc
Confidence            34567999998643 7788888887632 379999999988666654    4544322211  134445554443322 3


Q ss_pred             CCccEEEECCC---CHHHHHHHHHhcccCCEEEEEc
Q 017916          253 TGIDVSFDCAG---FNKTMSTALSATRAGGKVCLVG  285 (364)
Q Consensus       253 ~~~d~vid~~g---~~~~~~~~~~~l~~~G~~v~~g  285 (364)
                      ..+|+||--..   -.+.+..+++.|++||.++.=+
T Consensus       134 ~~fD~ifiD~dk~~y~~~~~~~~~lL~~GGvii~Dn  169 (219)
T d2avda1         134 GTFDVAVVDADKENCSAYYERCLQLLRPGGILAVLR  169 (219)
T ss_dssp             TCEEEEEECSCSTTHHHHHHHHHHHEEEEEEEEEEC
T ss_pred             CCccEEEEeCCHHHHHHHHHHHHHHhcCCcEEEEeC
Confidence            57999874322   1456778999999999988754

>d1ixka_ c.66.1.38 (A:) Hypothetical methyltransferase PH1374 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: NOL1/NOP2/sun
domain: Hypothetical methyltransferase PH1374
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=91.74  E-value=0.81  Score=38.34  Aligned_cols=102  Identities=24%  Similarity=0.311  Sum_probs=65.1

Q ss_pred             HHcCCCCCCEEEEE-cC-CHHHHHHHHHHHHCC-CCEEEEEecChhHHHHH----HHcCCCeEEecCCCcccHHHHHHHH
Q 017916          175 RRANIGPETNVLIM-GA-GPIGLVTMLGARAFG-APRIVIVDVDDYRLSVA----KELGADNIVKVSTNLQDIAEEVEKI  247 (364)
Q Consensus       175 ~~~~~~~g~~VLI~-Ga-g~~G~~ai~la~~~g-~~~vv~~~~~~~~~~~~----~~lg~~~~~~~~~~~~~~~~~i~~~  247 (364)
                      ....+++|++||=. .| |+   =+.+++..++ -..+++.+.+..|...+    +.+|...+..++.....+.      
T Consensus       110 ~~l~~~~g~~vlD~CAapGg---Kt~~l~~~~~~~~~i~a~d~~~~r~~~l~~~~~r~~~~~i~~~~~d~~~~~------  180 (313)
T d1ixka_         110 VALDPKPGEIVADMAAAPGG---KTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRLGVLNVILFHSSSLHIG------  180 (313)
T ss_dssp             HHHCCCTTCEEEECCSSCSH---HHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHTCCSEEEESSCGGGGG------
T ss_pred             hcccCCccceeeecccchhh---hhHhhhhhcccccceeeeccCHHHHHHHHHHHHHHHhhccccccccccccc------
Confidence            44678999998876 33 44   3445555443 23688899998887554    4678876655443322211      


Q ss_pred             HHHcCCCccEEE-E--CCCCH-------------------------HHHHHHHHhcccCCEEEEEcCC
Q 017916          248 QKAMGTGIDVSF-D--CAGFN-------------------------KTMSTALSATRAGGKVCLVGMG  287 (364)
Q Consensus       248 ~~~~~~~~d~vi-d--~~g~~-------------------------~~~~~~~~~l~~~G~~v~~g~~  287 (364)
                        .....||.|+ |  |+|++                         +.+..+++.+++||++|..--+
T Consensus       181 --~~~~~fD~ILvDaPCSg~G~~~r~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~lk~gG~lVYsTCS  246 (313)
T d1ixka_         181 --ELNVEFDKILLDAPCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPGGILVYSTCS  246 (313)
T ss_dssp             --GGCCCEEEEEEECCTTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESC
T ss_pred             --cccccccEEEEccccccCCceeeccchhhhhhhhHHHHHHHHHHHHHHhhhheeCCCcEEEEeecc
Confidence              1245788875 5  56643                         4667888899999998876533

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

Probab=91.73  E-value=0.31  Score=40.88  Aligned_cols=75  Identities=23%  Similarity=0.255  Sum_probs=43.2

Q ss_pred             CEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEec--ChhH---HHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcCCCcc
Q 017916          183 TNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDV--DDYR---LSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGID  256 (364)
Q Consensus       183 ~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~--~~~~---~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d  256 (364)
                      .+|||+|+ |-+|...+..+...|. .|++++.  ...+   .+.++..+--..+.-+-.  +. +.+.+...  +.++|
T Consensus         1 ~KILVTGatGfIGs~lv~~Ll~~g~-~V~~id~~~~~~~~~~~~~~~~~~~~~~i~~Di~--~~-~~l~~~~~--~~~~d   74 (338)
T d1orra_           1 AKLLITGGCGFLGSNLASFALSQGI-DLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIR--NK-NDVTRLIT--KYMPD   74 (338)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCCSTTHHHHHHHHHTTCCCEEEECCTT--CH-HHHHHHHH--HHCCS
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCcC-EEEEEECCCcccchhHHHHhhccCCcEEEEcccC--CH-HHHHHHHH--hcCCc
Confidence            37999998 9999999999888899 5666652  1222   233333332223322211  11 12222222  23689


Q ss_pred             EEEECCC
Q 017916          257 VSFDCAG  263 (364)
Q Consensus       257 ~vid~~g  263 (364)
                      +||.+++
T Consensus        75 ~Vih~aa   81 (338)
T d1orra_          75 SCFHLAG   81 (338)
T ss_dssp             EEEECCC
T ss_pred             eEEeecc
Confidence            9999875

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=91.71  E-value=0.33  Score=39.22  Aligned_cols=32  Identities=34%  Similarity=0.405  Sum_probs=26.7

Q ss_pred             EEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecCh
Q 017916          184 NVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDD  216 (364)
Q Consensus       184 ~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~  216 (364)
                      .|||+|+ +++|.+.++.+...|+ .|+.++.++
T Consensus         3 VvlITGas~GIG~aiA~~la~~Ga-~V~~~~~~~   35 (257)
T d1fjha_           3 IIVISGCATGIGAATRKVLEAAGH-QIVGIDIRD   35 (257)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSS
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCh
Confidence            4688997 9999999999999999 577776654

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

Probab=91.62  E-value=0.47  Score=40.09  Aligned_cols=30  Identities=33%  Similarity=0.479  Sum_probs=25.5

Q ss_pred             EEEEEcC-CHHHHHHHHHHHHCCCCEEEEEec
Q 017916          184 NVLIMGA-GPIGLVTMLGARAFGAPRIVIVDV  214 (364)
Q Consensus       184 ~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~  214 (364)
                      +|||+|+ |-+|...+..+...|. .|+++++
T Consensus         2 KiLItG~tGfIG~~l~~~L~~~g~-~V~~~d~   32 (338)
T d1udca_           2 RVLVTGGSGYIGSHTCVQLLQNGH-DVIILDN   32 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTC-EEEEEEC
T ss_pred             EEEEECCCCHHHHHHHHHHHHCcC-EEEEEEC
Confidence            6999998 9999999999999998 5666653

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

Probab=91.57  E-value=0.096  Score=44.84  Aligned_cols=36  Identities=19%  Similarity=0.157  Sum_probs=30.6

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChh
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDY  217 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~  217 (364)
                      .|.+|||+|+ |-+|...++.+...|. .|.++++...
T Consensus         7 ~~KkILVTG~tGfIGs~lv~~Ll~~g~-~V~~~~r~~~   43 (356)
T d1rkxa_           7 QGKRVFVTGHTGFKGGWLSLWLQTMGA-TVKGYSLTAP   43 (356)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCCC
Confidence            4789999998 9999999999999999 5777776543

>d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Dihydroxypyridine hydroxylase DhpH
species: Arthrobacter nicotinovorans [TaxId: 29320]

Probab=91.49  E-value=0.12  Score=41.97  Aligned_cols=34  Identities=18%  Similarity=0.312  Sum_probs=29.8

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecC
Q 017916          181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVD  215 (364)
Q Consensus       181 ~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~  215 (364)
                      ..++|+|.|+|..|++++..++..|. .|++++.+
T Consensus         3 ~~~kV~IiGaG~aGl~~A~~L~~~G~-~v~v~Er~   36 (265)
T d2voua1           3 TTDRIAVVGGSISGLTAALMLRDAGV-DVDVYERS   36 (265)
T ss_dssp             CCSEEEEECCSHHHHHHHHHHHHTTC-EEEEECSS
T ss_pred             CCCcEEEECcCHHHHHHHHHHHHCCC-CEEEEeCC
Confidence            45799999999999999999999999 68888764

>d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Molybdenum cofactor biosynthesis protein MoeB
domain: Molybdenum cofactor biosynthesis protein MoeB
species: Escherichia coli [TaxId: 562]

Probab=91.44  E-value=0.5  Score=38.04  Aligned_cols=32  Identities=25%  Similarity=0.459  Sum_probs=29.5

Q ss_pred             CCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEe
Q 017916          182 ETNVLIMGAGPIGLVTMLGARAFGAPRIVIVD  213 (364)
Q Consensus       182 g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~  213 (364)
                      +.+|+|.|+|++|..++..+.+.|...+..+|
T Consensus        30 ~~~VliiG~GglGs~va~~La~~Gvg~i~lvD   61 (247)
T d1jw9b_          30 DSRVLIVGLGGLGCAASQYLASAGVGNLTLLD   61 (247)
T ss_dssp             HCEEEEECCSHHHHHHHHHHHHHTCSEEEEEC
T ss_pred             CCCEEEECCCHHHHHHHHHHHHcCCCeEEEEC
Confidence            46999999999999999999999999988886

>d1y7la1 c.79.1.1 (A:2-311) O-acetylserine sulfhydrylase (Cysteine synthase) {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Haemophilus influenzae [TaxId: 727]

Probab=91.29  E-value=1.6  Score=36.23  Aligned_cols=102  Identities=14%  Similarity=0.145  Sum_probs=66.6

Q ss_pred             HHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEec--ChhHHHHHHHcCCCeEEecCC-----------------
Q 017916          175 RRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDV--DDYRLSVAKELGADNIVKVST-----------------  235 (364)
Q Consensus       175 ~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~--~~~~~~~~~~lg~~~~~~~~~-----------------  235 (364)
                      +...+.++++|+...+|..|++++..|+.+|.+.++++..  +..|...++.+|+..+..-..                 
T Consensus        54 ~~g~~~~~~~vv~~SsGN~g~a~A~~a~~~G~~~~i~~p~~~~~~k~~~~~~~GA~vv~~~~~~~~~~~~~~~~~~~~~~  133 (310)
T d1y7la1          54 KDGTLTKGKEIVDATSGNTGIALAYVAAARGYKITLTMPETMSLERKRLLCGLGVNLVLTEGAKGMKGAIAKAEEIVASD  133 (310)
T ss_dssp             HTTSSCTTCEEEESCCSHHHHHHHHHHHHHTCCEEEEEETTSCHHHHHHHHHTTCEEEEECGGGHHHHHHHHHHHHHHHC
T ss_pred             HcCCCCCCceeeeecCCCchHHHHHHHHHhhccccccchhhhhhhhhhhHHHhCCceEeccCccccchhhHHHHHHHHhh
Confidence            4456678877777677999999999999999987666643  557778888899865432100                 


Q ss_pred             --------Cccc---HH----HHHHHHHHHcCCCccEEEECCCCHHHHHHHHHhcc
Q 017916          236 --------NLQD---IA----EEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATR  276 (364)
Q Consensus       236 --------~~~~---~~----~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~  276 (364)
                              ...+   ..    ....++....+..+|.++.++|+.....-++..++
T Consensus       134 ~~~~~~~~~~~~~~~~~~~~~~~a~Ei~~~~~~~~d~vv~~~G~Gg~~~G~~~~lk  189 (310)
T d1y7la1         134 PSRYVMLKQFENPANPQIHRETTGPEIWKDTDGKVDVVVAGVGTGGSITGISRAIK  189 (310)
T ss_dssp             TTTEECCCTTTCTHHHHHHHHTHHHHHHHHTTTCEEEEEEECSSSHHHHHHHHHHH
T ss_pred             cCccccCCCCcchhhHHHhhhhHHHHHHHhcCCCCCEEEecCcCCcchhHHHHHHH
Confidence                    0000   00    01122223335578999999988777776666664

>d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Escherichia coli [TaxId: 562]

Probab=91.27  E-value=2  Score=31.53  Aligned_cols=97  Identities=21%  Similarity=0.204  Sum_probs=61.8

Q ss_pred             EEEEEcC-CHHHHHHHHHHHHCC--CCEEEEEecChhH---HHHHHHcCCCeEEecCCCcccHHHHHHHHHH--------
Q 017916          184 NVLIMGA-GPIGLVTMLGARAFG--APRIVIVDVDDYR---LSVAKELGADNIVKVSTNLQDIAEEVEKIQK--------  249 (364)
Q Consensus       184 ~VLI~Ga-g~~G~~ai~la~~~g--~~~vv~~~~~~~~---~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~--------  249 (364)
                      +|.|.|+ |.+|..+..+.+...  + .|++.+....-   .+.++++.+..+...++   +..+.++....        
T Consensus         3 ~I~IlGsTGSIG~~tL~Vi~~~~d~f-~v~~Lsa~~N~~~L~~q~~~f~pk~v~i~d~---~~~~~l~~~l~~~~~~~~~   78 (151)
T d1q0qa2           3 QLTILGSTGSIGCSTLDVVRHNPEHF-RVVALVAGKNVTRMVEQCLEFSPRYAVMDDE---ASAKLLKTMLQQQGSRTEV   78 (151)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHCTTTE-EEEEEEESSCHHHHHHHHHHHCCSEEEESSH---HHHHHHHHHHHHTTCCCEE
T ss_pred             eEEEEcCCcHHHHHHHHHHHhCCCCc-EEEEEEecCcHHHHHHHHHHHhhcccccccH---HHHHHHHHHhhhhcccccc
Confidence            6889998 999999999999873  5 45555443322   34456788887765432   11112222111        


Q ss_pred             ----------HcCCCccEEEECCCCHHHHHHHHHhcccCCEEEEE
Q 017916          250 ----------AMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLV  284 (364)
Q Consensus       250 ----------~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~  284 (364)
                                ....++|+++.+..+-..+...+..++.+-++.+.
T Consensus        79 ~~g~~~l~~~~~~~~~D~vi~AI~G~aGL~~t~~aik~gk~iaLA  123 (151)
T d1q0qa2          79 LSGQQAACDMAALEDVDQVMAAIVGAAGLLPTLAAIRAGKTILLA  123 (151)
T ss_dssp             EESHHHHHHHHTCTTCCEEEECCSSGGGHHHHHHHHHTTCEEEEC
T ss_pred             ccChHHHHHHhcCCCCCEEEEecCcccHHHHHHHHHhcCCeEEEE
Confidence                      11346899988877677888888888876655543

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.22  E-value=0.079  Score=42.62  Aligned_cols=36  Identities=22%  Similarity=0.420  Sum_probs=28.4

Q ss_pred             CCEEEEEcC-CHHHHHHHHHHHHCCC-CEEEEEecChh
Q 017916          182 ETNVLIMGA-GPIGLVTMLGARAFGA-PRIVIVDVDDY  217 (364)
Q Consensus       182 g~~VLI~Ga-g~~G~~ai~la~~~g~-~~vv~~~~~~~  217 (364)
                      +.+|||+|| |-+|...++.+...|. ..|.++.+++.
T Consensus        14 ~k~IlItGaTG~iG~~l~~~Ll~~g~~~~v~~~~R~~~   51 (232)
T d2bkaa1          14 NKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKL   51 (232)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCCCEEEEEecChh
Confidence            468999998 9999999998877775 46777776543

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=91.22  E-value=0.61  Score=38.50  Aligned_cols=35  Identities=20%  Similarity=0.169  Sum_probs=28.3

Q ss_pred             CCCEEEEEcC-C--HHHHHHHHHHHHCCCCEEEEEecCh
Q 017916          181 PETNVLIMGA-G--PIGLVTMLGARAFGAPRIVIVDVDD  216 (364)
Q Consensus       181 ~g~~VLI~Ga-g--~~G~~ai~la~~~g~~~vv~~~~~~  216 (364)
                      +|.++||+|+ |  ++|.+.++.+...|++ |+.+.+++
T Consensus         7 ~gK~alVTGass~~GIG~aiA~~la~~Ga~-Vvi~~~~~   44 (297)
T d1d7oa_           7 RGKRAFIAGIADDNGYGWAVAKSLAAAGAE-ILVGTWVP   44 (297)
T ss_dssp             TTCEEEEECCSSSSSHHHHHHHHHHHTTCE-EEEEEEHH
T ss_pred             CCCEEEEECCCCCchHHHHHHHHHHHCCCE-EEEEeCch
Confidence            5789999997 5  7999999999999995 55555543

>d1oria_ c.66.1.6 (A:) Protein arginine N-methyltransferase 1, PRMT1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Protein arginine N-methyltransferase 1, PRMT1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=91.22  E-value=0.59  Score=39.22  Aligned_cols=95  Identities=16%  Similarity=0.304  Sum_probs=54.7

Q ss_pred             CCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHH---HHHHcCCCe-EEecCCCcccHHHHHHHHHHHcCC
Q 017916          178 NIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLS---VAKELGADN-IVKVSTNLQDIAEEVEKIQKAMGT  253 (364)
Q Consensus       178 ~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~---~~~~lg~~~-~~~~~~~~~~~~~~i~~~~~~~~~  253 (364)
                      .+.+|++||-.|+|. |..++.+|+ .|++.|++++.++.-..   .++.-+... +........++.        ....
T Consensus        30 ~~~~~~~VLDiGcG~-G~ls~~aa~-~Ga~~V~avd~s~~~~~a~~~~~~n~~~~~v~~~~~~~~~~~--------~~~~   99 (316)
T d1oria_          30 HLFKDKVVLDVGSGT-GILCMFAAK-AGARKVIGIECSSISDYAVKIVKANKLDHVVTIIKGKVEEVE--------LPVE   99 (316)
T ss_dssp             HHHTTCEEEEETCTT-SHHHHHHHH-TTCSEEEEEECSTTHHHHHHHHHHTTCTTTEEEEESCTTTCC--------CSSS
T ss_pred             ccCCcCEEEEEecCC-cHHHHHHHH-hCCCEEEEEcCcHHHhhhhhHHHHhCCccccceEeccHHHcc--------cccc
Confidence            356899999998754 555555555 68888999998764322   223334322 211111111110        1135


Q ss_pred             CccEEEEC-CCC--------HHHHHHHHHhcccCCEEE
Q 017916          254 GIDVSFDC-AGF--------NKTMSTALSATRAGGKVC  282 (364)
Q Consensus       254 ~~d~vid~-~g~--------~~~~~~~~~~l~~~G~~v  282 (364)
                      .+|+++.- .+.        ...+...-++|+|+|+++
T Consensus       100 ~~D~ivs~~~~~~l~~e~~~~~~l~~~~r~Lkp~G~ii  137 (316)
T d1oria_         100 KVDIIISEWMGYCLFYESMLNTVLHARDKWLAPDGLIF  137 (316)
T ss_dssp             CEEEEEECCCBBTBTBTCCHHHHHHHHHHHEEEEEEEE
T ss_pred             eeEEEeeeeeeeeeccHHHHHHHHHHHHhcCCCCeEEE
Confidence            78998752 221        245556678999999876

>d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: 2,4-dienoyl-CoA reductase, middle domain
species: Escherichia coli [TaxId: 562]

Probab=91.19  E-value=0.15  Score=39.23  Aligned_cols=36  Identities=31%  Similarity=0.559  Sum_probs=31.0

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecCh
Q 017916          180 GPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDD  216 (364)
Q Consensus       180 ~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~  216 (364)
                      ..+.+|+|.|+|+.|+.|+..+...|. .|...+..+
T Consensus        41 ~~~k~V~IIGaGPAGL~AA~~la~~G~-~Vtl~E~~~   76 (179)
T d1ps9a3          41 VQKKNLAVVGAGPAGLAFAINAAARGH-QVTLFDAHS   76 (179)
T ss_dssp             SSCCEEEEECCSHHHHHHHHHHHTTTC-EEEEEESSS
T ss_pred             CCCcEEEEECccHHHHHHHHHHHhhcc-ceEEEeccC
Confidence            456899999999999999999999999 677777644

>d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase
species: Xanthobacter sp., py2 [TaxId: 35809]

Probab=91.08  E-value=0.37  Score=33.96  Aligned_cols=42  Identities=17%  Similarity=0.219  Sum_probs=34.0

Q ss_pred             HHHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecCh
Q 017916          174 CRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDD  216 (364)
Q Consensus       174 l~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~  216 (364)
                      ++.....++.+|+|.|+|.+|+=+++.++.+|. .+..+...+
T Consensus        14 ~~~l~~~~~~~vvVvGgG~ig~E~A~~l~~~g~-~vt~i~~~~   55 (121)
T d1mo9a2          14 VEELDYEPGSTVVVVGGSKTAVEYGCFFNATGR-RTVMLVRTE   55 (121)
T ss_dssp             HHHCCSCCCSEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSC
T ss_pred             HHHHhhCCCCEEEEECCCHHHHHHHHHHHhcch-hheEeeccc
Confidence            355667789999999999999999999999998 566665543

>d2fcaa1 c.66.1.53 (A:10-213) tRNA (guanine-N(7)-)-methyltransferase TrmB {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: TrmB-like
domain: tRNA (guanine-N(7)-)-methyltransferase TrmB
species: Bacillus subtilis [TaxId: 1423]

Probab=90.87  E-value=1.2  Score=34.66  Aligned_cols=94  Identities=11%  Similarity=0.079  Sum_probs=62.4

Q ss_pred             EEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHH----HHcCCCeEEecCCCcccHHHHHHHHHHHcCCCccEEE
Q 017916          184 NVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA----KELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF  259 (364)
Q Consensus       184 ~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~----~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vi  259 (364)
                      .||-.|.|. |..++.+|+...-..+++++.+......+    ++.+.+++..+...-.++.    ...  ....+|.++
T Consensus        32 lvLeIGcG~-G~~~~~lA~~~p~~~~iGiD~~~~~i~~a~~~~~~~~l~Nv~~~~~Da~~l~----~~~--~~~~~d~v~  104 (204)
T d2fcaa1          32 IHIEVGTGK-GQFISGMAKQNPDINYIGIELFKSVIVTAVQKVKDSEAQNVKLLNIDADTLT----DVF--EPGEVKRVY  104 (204)
T ss_dssp             EEEEECCTT-SHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHSCCSSEEEECCCGGGHH----HHC--CTTSCCEEE
T ss_pred             eEEEEEecC-cHHHHHHHHhCCCCcEEEeecchHHHHHHHHHHHHHhccCchhcccchhhhh----ccc--Cchhhhccc
Confidence            455568766 88899999987666899999988766543    4567776544333222221    111  134677776


Q ss_pred             ECCCC--------------HHHHHHHHHhcccCCEEEEE
Q 017916          260 DCAGF--------------NKTMSTALSATRAGGKVCLV  284 (364)
Q Consensus       260 d~~g~--------------~~~~~~~~~~l~~~G~~v~~  284 (364)
                      -....              ++.+..+.+.|+|||.+...
T Consensus       105 i~fp~P~~k~~h~k~Rl~~~~~l~~~~r~LkpgG~l~i~  143 (204)
T d2fcaa1         105 LNFSDPWPKKRHEKRRLTYSHFLKKYEEVMGKGGSIHFK  143 (204)
T ss_dssp             EESCCCCCSGGGGGGSTTSHHHHHHHHHHHTTSCEEEEE
T ss_pred             cccccccchhhhcchhhhHHHHHHHHHHhCCCCcEEEEE
Confidence            43322              36888999999999998775

>d2b78a2 c.66.1.51 (A:69-385) Hypothetical protein SMu776, middle and C-terminal domains {Streptococcus mutans [TaxId: 1309]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein SMu776, middle and C-terminal domains
species: Streptococcus mutans [TaxId: 1309]

Probab=90.85  E-value=1.2  Score=37.39  Aligned_cols=102  Identities=15%  Similarity=0.092  Sum_probs=63.9

Q ss_pred             cCCCCCCEEEEEcC--CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHH----cCC--CeEEecCCCcccHHHHHHHHH
Q 017916          177 ANIGPETNVLIMGA--GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKE----LGA--DNIVKVSTNLQDIAEEVEKIQ  248 (364)
Q Consensus       177 ~~~~~g~~VLI~Ga--g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~----lg~--~~~~~~~~~~~~~~~~i~~~~  248 (364)
                      ..+.+|++||=..+  |+.+..    |...|+..|+.++.++...+++++    -|.  ..+-.+   ..|..+.++.+.
T Consensus       140 ~~~~~g~~VLdlf~~~G~~sl~----aa~~ga~~V~~vD~s~~a~~~a~~N~~~n~l~~~~~~~i---~~d~~~~l~~~~  212 (317)
T d2b78a2         140 NGSAAGKTVLNLFSYTAAFSVA----AAMGGAMATTSVDLAKRSRALSLAHFEANHLDMANHQLV---VMDVFDYFKYAR  212 (317)
T ss_dssp             HTTTBTCEEEEETCTTTHHHHH----HHHTTBSEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEE---ESCHHHHHHHHH
T ss_pred             HHhhCCCceeecCCCCcHHHHH----HHhCCCceEEEecCCHHHHHHHHHHHHHhcccCcceEEE---EccHHHHHHHHH
Confidence            44578999998743  555543    334688889999999988777663    233  221111   134455555543


Q ss_pred             HHcCCCccEEE-ECC--CC------------HHHHHHHHHhcccCCEEEEEcC
Q 017916          249 KAMGTGIDVSF-DCA--GF------------NKTMSTALSATRAGGKVCLVGM  286 (364)
Q Consensus       249 ~~~~~~~d~vi-d~~--g~------------~~~~~~~~~~l~~~G~~v~~g~  286 (364)
                      . .+..||+|| |.-  +.            .+....++++|+|+|.++.+..
T Consensus       213 ~-~~~~fD~Ii~DPP~f~~~~~~~~~~~~~~~~L~~~a~~ll~pgG~l~~~sc  264 (317)
T d2b78a2         213 R-HHLTYDIIIIDPPSFARNKKEVFSVSKDYHKLIRQGLEILSENGLIIASTN  264 (317)
T ss_dssp             H-TTCCEEEEEECCCCC-----CCCCHHHHHHHHHHHHHHTEEEEEEEEEEEC
T ss_pred             h-hcCCCCEEEEcChhhccchhHHHHHHHHHHHHHHHHHHHcCCCCEEEEEeC
Confidence            3 356899987 421  10            1466678899999999988754

>d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Tobacco (Nicotiana tabacum) [TaxId: 4097]

Probab=90.84  E-value=0.12  Score=42.69  Aligned_cols=33  Identities=21%  Similarity=0.484  Sum_probs=29.1

Q ss_pred             CCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecC
Q 017916          182 ETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVD  215 (364)
Q Consensus       182 g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~  215 (364)
                      +.+|+|.|+|..|++|+..++..|. .|.+++.+
T Consensus         1 ~KkV~IIGaG~aGL~aA~~La~~G~-~V~vlE~~   33 (373)
T d1seza1           1 AKRVAVIGAGVSGLAAAYKLKIHGL-NVTVFEAE   33 (373)
T ss_dssp             CCEEEEECCSHHHHHHHHHHHTTSC-EEEEECSS
T ss_pred             CCEEEEECcCHHHHHHHHHHHhCCC-CEEEEeCC
Confidence            4689999999999999999999999 68888754

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=90.83  E-value=1.5  Score=37.52  Aligned_cols=31  Identities=29%  Similarity=0.446  Sum_probs=26.9

Q ss_pred             CCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEe
Q 017916          182 ETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVD  213 (364)
Q Consensus       182 g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~  213 (364)
                      |.+|||+|+ |-+|..++..+...|. .|+++|
T Consensus         1 g~kILVTGatGfiG~~lv~~Ll~~g~-~V~~iD   32 (393)
T d1i24a_           1 GSRVMVIGGDGYCGWATALHLSKKNY-EVCIVD   32 (393)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCcC-EEEEEe
Confidence            679999998 9999999999999998 678876

>d1ri5a_ c.66.1.34 (A:) mRNA cap (Guanine N-7) methyltransferase {Fungus (Encephalitozoon cuniculi) [TaxId: 6035]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: mRNA cap (Guanine N-7) methyltransferase
domain: mRNA cap (Guanine N-7) methyltransferase
species: Fungus (Encephalitozoon cuniculi) [TaxId: 6035]

Probab=90.77  E-value=0.2  Score=40.72  Aligned_cols=95  Identities=19%  Similarity=0.224  Sum_probs=60.2

Q ss_pred             CCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHH----cCCC-eE--EecCCCcccHHHHHHHHHHHc
Q 017916          179 IGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKE----LGAD-NI--VKVSTNLQDIAEEVEKIQKAM  251 (364)
Q Consensus       179 ~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~----lg~~-~~--~~~~~~~~~~~~~i~~~~~~~  251 (364)
                      ++++++||=.|+|. |..+..+++. |...++++|.+++..+.+++    ++.. .+  +.-+.....+         ..
T Consensus        22 ~~~~~~VLDlGCG~-G~~~~~~~~~-~~~~v~GiD~S~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~---------~~   90 (252)
T d1ri5a_          22 TKRGDSVLDLGCGK-GGDLLKYERA-GIGEYYGVDIAEVSINDARVRARNMKRRFKVFFRAQDSYGRHM---------DL   90 (252)
T ss_dssp             CCTTCEEEEETCTT-TTTHHHHHHH-TCSEEEEEESCHHHHHHHHHHHHTSCCSSEEEEEESCTTTSCC---------CC
T ss_pred             CCCcCEEEEecccC-cHHHHHHHHc-CCCeEEEecCCHHHHHHHHHHHHhcCCCcceEEEEcchhhhcc---------cc
Confidence            57899999998754 5556677665 55579999999998877764    3322 21  1111100000         01


Q ss_pred             CCCccEEEECCCC------H----HHHHHHHHhcccCCEEEEE
Q 017916          252 GTGIDVSFDCAGF------N----KTMSTALSATRAGGKVCLV  284 (364)
Q Consensus       252 ~~~~d~vid~~g~------~----~~~~~~~~~l~~~G~~v~~  284 (364)
                      ++.+|+|+.....      .    ..+..+.++|+|||+++..
T Consensus        91 ~~~fD~V~~~~~l~~~~~~~~~~~~~l~~i~~~Lk~gG~~i~~  133 (252)
T d1ri5a_          91 GKEFDVISSQFSFHYAFSTSESLDIAQRNIARHLRPGGYFIMT  133 (252)
T ss_dssp             SSCEEEEEEESCGGGGGSSHHHHHHHHHHHHHTEEEEEEEEEE
T ss_pred             cccceEEEEcceeeecCCCHHHHHHHHHHHhceeCCCCEEEEE
Confidence            4579999864331      1    3556788899999998864

>d1xeaa1 c.2.1.3 (A:2-122,A:267-312) Putative oxidoreductase VCA1048 {Vibrio cholerae [TaxId: 666]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Putative oxidoreductase VCA1048
species: Vibrio cholerae [TaxId: 666]

Probab=90.66  E-value=0.66  Score=34.74  Aligned_cols=130  Identities=14%  Similarity=0.128  Sum_probs=74.0

Q ss_pred             EEEEEcCCHHHHH-HHHHHHHCCCCEEEEEecChhHHHH-HHHcCCCeEEecCCCcccHHHHHHHHHHHcCCCccEEEEC
Q 017916          184 NVLIMGAGPIGLV-TMLGARAFGAPRIVIVDVDDYRLSV-AKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDC  261 (364)
Q Consensus       184 ~VLI~Gag~~G~~-ai~la~~~g~~~vv~~~~~~~~~~~-~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid~  261 (364)
                      +|.|.|+|..|.. .+...+..+.-.+++++.++++.+. .++++....+  .+    +.+    +.   ...+|+|+-|
T Consensus         3 rvgiiG~G~~~~~~~~~~l~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~--~~----~~~----ll---~~~iD~V~I~   69 (167)
T d1xeaa1           3 KIAMIGLGDIAQKAYLPVLAQWPDIELVLCTRNPKVLGTLATRYRVSATC--TD----YRD----VL---QYGVDAVMIH   69 (167)
T ss_dssp             EEEEECCCHHHHHTHHHHHTTSTTEEEEEECSCHHHHHHHHHHTTCCCCC--SS----TTG----GG---GGCCSEEEEC
T ss_pred             EEEEEcCCHHHHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHhccccccc--cc----HHH----hc---ccccceeccc
Confidence            6888999988854 4555555533256677777766554 4567765432  11    111    11   2368999999


Q ss_pred             CCCHHHHHHHHHhcccCCEEEEEcCCCCCccc---cchhh-hhcCcEE-EeeccCCCcHHHHHHHHHcCCC
Q 017916          262 AGFNKTMSTALSATRAGGKVCLVGMGHHEMTV---PLTPA-AVREVDV-VGVFRYKNTWPLCLELLRSGKI  327 (364)
Q Consensus       262 ~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~---~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~l~~g~~  327 (364)
                      +....+...+..++..+ .-+++.-+......   .+..+ -.++..+ .+...+...+.++.+.+..|++
T Consensus        70 tp~~~H~~~~~~al~~g-k~V~~EKP~~~~~~e~~~l~~~a~~~~~~~~vg~~r~~~~~~~~~~~~~~G~i  139 (167)
T d1xeaa1          70 AATDVHSTLAAFFLHLG-IPTFVDKPLAASAQECENLYELAEKHHQPLYVGFNGFDAMVQDWLQVAAAGKL  139 (167)
T ss_dssp             SCGGGHHHHHHHHHHTT-CCEEEESCSCSSHHHHHHHHHHHHHTTCCEEEECGTHHHHHHHHHHHHHHTCC
T ss_pred             ccccccccccccccccc-cccccCCCCcCCHHHHHHHHHHHHHcCCEEEEEeCcCCHHHHHHHHHhhcCCC
Confidence            98778888888888865 55666532222111   11111 1233322 3332223446677777788876

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=90.52  E-value=0.87  Score=36.82  Aligned_cols=82  Identities=13%  Similarity=0.103  Sum_probs=46.4

Q ss_pred             CCCEEEEEcC-CHHHHHHHH-HHHH--CCCCEEEEEecChhHHHHH-HHc---CC-CeE--EecCC-CcccHHHHHHHHH
Q 017916          181 PETNVLIMGA-GPIGLVTML-GARA--FGAPRIVIVDVDDYRLSVA-KEL---GA-DNI--VKVST-NLQDIAEEVEKIQ  248 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~-la~~--~g~~~vv~~~~~~~~~~~~-~~l---g~-~~~--~~~~~-~~~~~~~~i~~~~  248 (364)
                      .|..+||+|+ +++|.+.++ ||+.  .|+ .|+.+++++++.+.+ +++   +. ..+  +..|- ..++..+.++.+.
T Consensus         5 ~gKvalITGas~GIG~aiA~~lA~~~~~G~-~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~l~~~~~   83 (259)
T d1oaaa_           5 GCAVCVLTGASRGFGRALAPQLARLLSPGS-VMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAVR   83 (259)
T ss_dssp             BSEEEEESSCSSHHHHHHHHHHHTTBCTTC-EEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHhcccCCC-EEEEEECCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHH
Confidence            4667788898 899987765 4553  588 677788888776544 222   21 122  22222 2233333333332


Q ss_pred             HH---cCCCccEEEECCC
Q 017916          249 KA---MGTGIDVSFDCAG  263 (364)
Q Consensus       249 ~~---~~~~~d~vid~~g  263 (364)
                      +.   .+...|++++++|
T Consensus        84 ~~~~~~~~~~~~lvnnag  101 (259)
T d1oaaa_          84 ELPRPEGLQRLLLINNAA  101 (259)
T ss_dssp             HSCCCTTCCEEEEEECCC
T ss_pred             HhhhhccCceEEEEeccc
Confidence            21   2346788888765

>d1leha1 c.2.1.7 (A:135-364) Leucine dehydrogenase {Bacillus sphaericus [TaxId: 1421]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Leucine dehydrogenase
species: Bacillus sphaericus [TaxId: 1421]

Probab=90.43  E-value=0.61  Score=37.13  Aligned_cols=69  Identities=28%  Similarity=0.310  Sum_probs=49.5

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHH-HcCCCeEEecCCCcccHHHHHHHHHHHcCCCccEE
Q 017916          180 GPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAK-ELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVS  258 (364)
Q Consensus       180 ~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~-~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~v  258 (364)
                      -.|.+|+|.|-|.+|..+++++...|+ .+++++.+..+.+.+. ..|...+ +   . .++          ...+.|+.
T Consensus        37 l~g~~v~IqG~GnVG~~~a~~L~~~Ga-kvv~~d~~~~~~~~~~~~~g~~~~-~---~-~~~----------~~~~cDIl  100 (230)
T d1leha1          37 LEGLAVSVQGLGNVAKALCKKLNTEGA-KLVVTDVNKAAVSAAVAEEGADAV-A---P-NAI----------YGVTCDIF  100 (230)
T ss_dssp             CTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHHHCCEEC-C---G-GGT----------TTCCCSEE
T ss_pred             CCCCEEEEECCCHHHHHHHHHHHHCCC-EEEeecccHHHHHHHHHhcCCccc-C---C-ccc----------ccccccEe
Confidence            468999999999999999999999999 6778877777765544 4565432 1   1 111          13578888


Q ss_pred             EECCCC
Q 017916          259 FDCAGF  264 (364)
Q Consensus       259 id~~g~  264 (364)
                      +=|+..
T Consensus       101 ~PcA~~  106 (230)
T d1leha1         101 APCALG  106 (230)
T ss_dssp             EECSCS
T ss_pred             cccccc
Confidence            876653

>d2gh1a1 c.66.1.49 (A:13-293) Methyltransferase BC2162 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: BC2162-like
domain: Methyltransferase BC2162
species: Bacillus cereus [TaxId: 1396]

Probab=90.29  E-value=0.65  Score=38.17  Aligned_cols=98  Identities=16%  Similarity=0.236  Sum_probs=65.1

Q ss_pred             cCCCCCCEEEEEcCCHHHHHHHHHHHHCCC-CEEEEEecChhHHHHHHHc----CCCeEEecCCCcccHHHHHHHHHHHc
Q 017916          177 ANIGPETNVLIMGAGPIGLVTMLGARAFGA-PRIVIVDVDDYRLSVAKEL----GADNIVKVSTNLQDIAEEVEKIQKAM  251 (364)
Q Consensus       177 ~~~~~g~~VLI~Gag~~G~~ai~la~~~g~-~~vv~~~~~~~~~~~~~~l----g~~~~~~~~~~~~~~~~~i~~~~~~~  251 (364)
                      .++.++.+||=.|+|. |..+..+++..+. ..|++++.+++..+.+++.    +....+...+. .+       +  ..
T Consensus        23 ~~~~~~~~ILDiGcG~-G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~f~~~d~-~~-------~--~~   91 (281)
T d2gh1a1          23 WKITKPVHIVDYGCGY-GYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLLPYDSEFLEGDA-TE-------I--EL   91 (281)
T ss_dssp             SCCCSCCEEEEETCTT-THHHHHHTTTSCTTCEEEEEECCHHHHHHHHHHHHSSSSEEEEEESCT-TT-------C--CC
T ss_pred             hccCCcCEEEEecCcC-CHHHHHHHHhCCCCCEEEEEecchhHhhhhhccccccccccccccccc-cc-------c--cc
Confidence            4567888999999864 7888888887643 3789999999887776642    33211111110 11       1  01


Q ss_pred             CCCccEEEECC-----CC-HHHHHHHHHhcccCCEEEEEc
Q 017916          252 GTGIDVSFDCA-----GF-NKTMSTALSATRAGGKVCLVG  285 (364)
Q Consensus       252 ~~~~d~vid~~-----g~-~~~~~~~~~~l~~~G~~v~~g  285 (364)
                      ...+|+|+...     .+ ...++.+.+.|+|||.++...
T Consensus        92 ~~~fD~v~~~~~l~~~~d~~~~l~~~~~~LkpgG~lii~~  131 (281)
T d2gh1a1          92 NDKYDIAICHAFLLHMTTPETMLQKMIHSVKKGGKIICFE  131 (281)
T ss_dssp             SSCEEEEEEESCGGGCSSHHHHHHHHHHTEEEEEEEEEEE
T ss_pred             cCCceEEEEehhhhcCCCHHHHHHHHHHHcCcCcEEEEEE
Confidence            35799998643     22 357788999999999998764

>d3etja2 c.30.1.1 (A:1-78) N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain
species: Escherichia coli [TaxId: 562]

Probab=90.15  E-value=0.16  Score=33.04  Aligned_cols=33  Identities=21%  Similarity=0.425  Sum_probs=27.8

Q ss_pred             CEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecCh
Q 017916          183 TNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDD  216 (364)
Q Consensus       183 ~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~  216 (364)
                      .+|.|.|+|-+|.+.++-|+.+|. .+.+.+.++
T Consensus         2 k~vgIlG~GQLgrMl~~Aa~~LG~-~v~vldp~~   34 (78)
T d3etja2           2 KQVCVLGNGQLGRMLRQAGEPLGI-AVWPVGLDA   34 (78)
T ss_dssp             EEEEEEBCSHHHHHHHHHHGGGTE-EEEEECTTS
T ss_pred             CEEEEEcCCHHHHHHHHHHHHcCC-EEEEEcCCC
Confidence            378999999999999999999999 567766543

>d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Haemophilus influenzae [TaxId: 727]

Probab=90.01  E-value=0.61  Score=31.49  Aligned_cols=51  Identities=16%  Similarity=0.107  Sum_probs=37.6

Q ss_pred             CCCCEEEEEcCCHHHHHH-HHHHHHCCCCEEEEEecC-hhHHHHHHHcCCCeEE
Q 017916          180 GPETNVLIMGAGPIGLVT-MLGARAFGAPRIVIVDVD-DYRLSVAKELGADNIV  231 (364)
Q Consensus       180 ~~g~~VLI~Gag~~G~~a-i~la~~~g~~~vv~~~~~-~~~~~~~~~lg~~~~~  231 (364)
                      +...+|.+.|-|++|+.+ +++++..|+ .|.+.|.. ....+.++++|+....
T Consensus         6 ~~~~~ihfiGigG~GMs~LA~~L~~~G~-~VsGSD~~~~~~~~~L~~~Gi~v~~   58 (96)
T d1p3da1           6 RRVQQIHFIGIGGAGMSGIAEILLNEGY-QISGSDIADGVVTQRLAQAGAKIYI   58 (96)
T ss_dssp             TTCCEEEEETTTSTTHHHHHHHHHHHTC-EEEEEESCCSHHHHHHHHTTCEEEE
T ss_pred             hhCCEEEEEEECHHHHHHHHHHHHhCCC-EEEEEeCCCChhhhHHHHCCCeEEE
Confidence            456789888987778777 789999999 68888764 3445566778876443

>d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Formate dehydrogenase
species: Pseudomonas sp., strain 101 [TaxId: 306]

Probab=89.94  E-value=0.34  Score=37.45  Aligned_cols=90  Identities=20%  Similarity=0.157  Sum_probs=58.7

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcCCCccEEEE
Q 017916          181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  260 (364)
Q Consensus       181 ~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid  260 (364)
                      .+.+|.|.|.|.+|...++.++.+|. .|+..+.........+..+....       .+    +.++.    ...|+|+-
T Consensus        43 ~~~~vgiiG~G~IG~~va~~l~~fg~-~v~~~d~~~~~~~~~~~~~~~~~-------~~----l~~~l----~~sD~v~~  106 (188)
T d2naca1          43 EAMHVGTVAAGRIGLAVLRRLAPFDV-HLHYTDRHRLPESVEKELNLTWH-------AT----REDMY----PVCDVVTL  106 (188)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHGGGTC-EEEEECSSCCCHHHHHHHTCEEC-------SS----HHHHG----GGCSEEEE
T ss_pred             cccceeeccccccchhhhhhhhccCc-eEEEEeecccccccccccccccc-------CC----HHHHH----Hhccchhh
Confidence            57899999999999999999999999 67888765544555455554321       11    22221    35677766


Q ss_pred             CCCC-HH----HHHHHHHhcccCCEEEEEcC
Q 017916          261 CAGF-NK----TMSTALSATRAGGKVCLVGM  286 (364)
Q Consensus       261 ~~g~-~~----~~~~~~~~l~~~G~~v~~g~  286 (364)
                      +..- ++    .-...++.|+++..++.++.
T Consensus       107 ~~plt~~T~~li~~~~l~~mk~ga~lIN~aR  137 (188)
T d2naca1         107 NCPLHPETEHMINDETLKLFKRGAYIVNTAR  137 (188)
T ss_dssp             CSCCCTTTTTCBSHHHHTTSCTTEEEEECSC
T ss_pred             cccccccchhhhHHHHHHhCCCCCEEEecCc
Confidence            4431 11    11356788888887777653

>d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=89.89  E-value=0.69  Score=32.75  Aligned_cols=41  Identities=22%  Similarity=0.418  Sum_probs=32.1

Q ss_pred             HHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecCh
Q 017916          175 RRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDD  216 (364)
Q Consensus       175 ~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~  216 (364)
                      +...-.++.+|+|.|+|.+|+-+++.++.+|. .|..++..+
T Consensus        23 ~~~~~~~~k~vvViGgG~iG~E~A~~l~~~g~-~Vtlie~~~   63 (123)
T d1nhpa2          23 QKTVDPEVNNVVVIGSGYIGIEAAEAFAKAGK-KVTVIDILD   63 (123)
T ss_dssp             HHHTCTTCCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSS
T ss_pred             HHhhccCCCEEEEECChHHHHHHHHHhhccce-EEEEEEecC
Confidence            33444567899999999999999999999999 466665543

>d1g6q1_ c.66.1.6 (1:) Arginine methyltransferase, HMT1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Arginine methyltransferase, HMT1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=89.84  E-value=0.49  Score=40.00  Aligned_cols=96  Identities=20%  Similarity=0.298  Sum_probs=53.1

Q ss_pred             cCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhH---HHHHHHcCCCe-EEecCCCcccHHHHHHHHHHHcC
Q 017916          177 ANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYR---LSVAKELGADN-IVKVSTNLQDIAEEVEKIQKAMG  252 (364)
Q Consensus       177 ~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~---~~~~~~lg~~~-~~~~~~~~~~~~~~i~~~~~~~~  252 (364)
                      ....+|++||-.|+|. |..++. |...|++.|++++.++.-   .+..++.+... +........++        ....
T Consensus        34 ~~~~~~~~VLDlGcGt-G~ls~~-aa~~Ga~~V~avd~s~~~~~a~~~~~~~~~~~~i~~i~~~~~~l--------~~~~  103 (328)
T d1g6q1_          34 KDLFKDKIVLDVGCGT-GILSMF-AAKHGAKHVIGVDMSSIIEMAKELVELNGFSDKITLLRGKLEDV--------HLPF  103 (328)
T ss_dssp             HHHHTTCEEEEETCTT-SHHHHH-HHHTCCSEEEEEESSTHHHHHHHHHHHTTCTTTEEEEESCTTTS--------CCSS
T ss_pred             cccCCcCEEEEeCCCC-CHHHHH-HHHhCCCEEEEEeCCHHHHHHHHHHHHhCccccceEEEeehhhc--------cCcc
Confidence            3446789999998753 555543 344788899999987521   12233444322 21111111111        0013


Q ss_pred             CCccEEEECC-C-------C-HHHHHHHHHhcccCCEEE
Q 017916          253 TGIDVSFDCA-G-------F-NKTMSTALSATRAGGKVC  282 (364)
Q Consensus       253 ~~~d~vid~~-g-------~-~~~~~~~~~~l~~~G~~v  282 (364)
                      ..+|+++... +       . ...+...-++|+|+|.++
T Consensus       104 ~~~D~i~se~~~~~~~~e~~~~~~~~a~~r~LkpgG~ii  142 (328)
T d1g6q1_         104 PKVDIIISEWMGYFLLYESMMDTVLYARDHYLVEGGLIF  142 (328)
T ss_dssp             SCEEEEEECCCBTTBSTTCCHHHHHHHHHHHEEEEEEEE
T ss_pred             cceeEEEEEecceeeccchhHHHHHHHHHhccCCCeEEE
Confidence            5799987522 1       1 234445568899999875

>d3c96a1 c.3.1.2 (A:4-182,A:294-402) Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Monooxygenase PhzS
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=89.77  E-value=0.19  Score=40.94  Aligned_cols=33  Identities=27%  Similarity=0.488  Sum_probs=28.3

Q ss_pred             EEEEEcCCHHHHHHHHHHHHCCCCEEEEEecCh
Q 017916          184 NVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDD  216 (364)
Q Consensus       184 ~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~  216 (364)
                      .|+|.|+|..|++++.+++..|...|.+++.++
T Consensus         3 ~V~IvGaG~aGl~~A~~L~~~Gi~~V~V~Er~~   35 (288)
T d3c96a1           3 DILIAGAGIGGLSCALALHQAGIGKVTLLESSS   35 (288)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTCSEEEEEESSS
T ss_pred             EEEEECcCHHHHHHHHHHHhCCCCeEEEEeCCC
Confidence            689999999999999999999976677777643

>d2p7ia1 c.66.1.41 (A:22-246) Hypothetical protein ECA1738 {Erwinia carotovora [TaxId: 554]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein ECA1738
species: Erwinia carotovora [TaxId: 554]

Probab=89.66  E-value=0.27  Score=39.02  Aligned_cols=95  Identities=18%  Similarity=0.098  Sum_probs=58.9

Q ss_pred             CCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcCCCccE
Q 017916          178 NIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDV  257 (364)
Q Consensus       178 ~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~  257 (364)
                      ....+.+||=.|+|. |..+..+++ .|. .|++++.+++..+.+++...+.+.-....-+++         ...+.+|+
T Consensus        17 ~~~~~~~VLDiGcG~-G~~~~~l~~-~g~-~v~giD~s~~~i~~a~~~~~~~~~~~~~~~~~~---------~~~~~fD~   84 (225)
T d2p7ia1          17 PFFRPGNLLELGSFK-GDFTSRLQE-HFN-DITCVEASEEAISHAQGRLKDGITYIHSRFEDA---------QLPRRYDN   84 (225)
T ss_dssp             GGCCSSCEEEESCTT-SHHHHHHTT-TCS-CEEEEESCHHHHHHHHHHSCSCEEEEESCGGGC---------CCSSCEEE
T ss_pred             hhCCCCcEEEEeCCC-cHHHHHHHH-cCC-eEEEEeCcHHHhhhhhccccccccccccccccc---------cccccccc
Confidence            345677899998755 666666654 466 589999999999988764333221111111111         11457999


Q ss_pred             EEECC-----CC-HHHHHHHH-HhcccCCEEEEE
Q 017916          258 SFDCA-----GF-NKTMSTAL-SATRAGGKVCLV  284 (364)
Q Consensus       258 vid~~-----g~-~~~~~~~~-~~l~~~G~~v~~  284 (364)
                      |+..-     -. ...+..+. ++|+|+|.++..
T Consensus        85 I~~~~vleh~~d~~~~l~~i~~~~Lk~gG~l~i~  118 (225)
T d2p7ia1          85 IVLTHVLEHIDDPVALLKRINDDWLAEGGRLFLV  118 (225)
T ss_dssp             EEEESCGGGCSSHHHHHHHHHHTTEEEEEEEEEE
T ss_pred             ccccceeEecCCHHHHHHHHHHHhcCCCceEEEE
Confidence            97531     22 23455666 679999998865

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=89.49  E-value=0.28  Score=41.98  Aligned_cols=35  Identities=20%  Similarity=0.194  Sum_probs=29.1

Q ss_pred             CCCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecC
Q 017916          180 GPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVD  215 (364)
Q Consensus       180 ~~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~  215 (364)
                      ..+.+|||+|+ |-+|...+..+...|. .|++++..
T Consensus        13 ~~nMKILVTGgsGfIGs~lv~~L~~~g~-~V~~~d~~   48 (363)
T d2c5aa1          13 SENLKISITGAGGFIASHIARRLKHEGH-YVIASDWK   48 (363)
T ss_dssp             TSCCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESS
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCcC-EEEEEeCC
Confidence            46789999998 9999999999999998 56666543

>d1tlta1 c.2.1.3 (A:5-127,A:268-308) Virulence factor MviM {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Virulence factor MviM
species: Escherichia coli [TaxId: 562]

Probab=89.47  E-value=0.95  Score=33.67  Aligned_cols=128  Identities=11%  Similarity=0.030  Sum_probs=72.5

Q ss_pred             EEEEEcCCHHHHH-HHHHHHHC-CCCEEEEEecChhHH-HHHHHcCCCeEEecCCCcccHHHHHHHHHHHcCCCccEEEE
Q 017916          184 NVLIMGAGPIGLV-TMLGARAF-GAPRIVIVDVDDYRL-SVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  260 (364)
Q Consensus       184 ~VLI~Gag~~G~~-ai~la~~~-g~~~vv~~~~~~~~~-~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid  260 (364)
                      +|.|.|.|..|.- .+...+.. +++.+.+.+.+.++. ++.+++++..   ++    +    +.++.    ..+|+|+-
T Consensus         3 ri~iIG~G~~g~~~~~~~l~~~~~~~i~~v~d~~~~~~~~~~~~~~~~~---~~----~----~~~l~----~~~D~V~I   67 (164)
T d1tlta1           3 RIGVVGLGGIAQKAWLPVLAAASDWTLQGAWSPTRAKALPICESWRIPY---AD----S----LSSLA----ASCDAVFV   67 (164)
T ss_dssp             EEEEECCSTHHHHTHHHHHHSCSSEEEEEEECSSCTTHHHHHHHHTCCB---CS----S----HHHHH----TTCSEEEE
T ss_pred             EEEEEcCCHHHHHHHHHHHHhCCCcEEEEEEechhHhhhhhhhcccccc---cc----c----chhhh----hhcccccc
Confidence            5788999888863 55555544 665555566655554 4556777652   21    1    22222    35899999


Q ss_pred             CCCCHHHHHHHHHhcccCCEEEEEcCCCCCccccch----hhhhcCcEEEeeccC---CCcHHHHHHHHHcCCC
Q 017916          261 CAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLT----PAAVREVDVVGVFRY---KNTWPLCLELLRSGKI  327 (364)
Q Consensus       261 ~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~----~~~~~~~~~~~~~~~---~~~~~~~~~~l~~g~~  327 (364)
                      |+....+...+..+|..+ .-+.+.-+.....-...    ..-.++..+.-.+..   ....+.+.+++.+|.+
T Consensus        68 ~tp~~~h~~~~~~al~~g-k~V~~EKPla~~~~e~~~l~~~a~~~~~~~~v~~~~r~~~~~~~~~~~~i~~g~i  140 (164)
T d1tlta1          68 HSSTASHFDVVSTLLNAG-VHVCVDKPLAENLRDAERLVELAARKKLTLMVGFNRRFFVGCARHFIECVQNQTV  140 (164)
T ss_dssp             CSCTTHHHHHHHHHHHTT-CEEEEESSSCSSHHHHHHHHHHHHHTTCCEEEECGGGGHHHHHHHHHHHHHHTCC
T ss_pred             cccchhcccccccccccc-ceeeccccccCCHHHHHHHHHHHHHcCCcEEEEeccccCHHHHHHHHHHHHCCCC
Confidence            988778888888888765 55666532221111111    122233332222222   2234567788888887

>d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, middle domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=89.30  E-value=0.26  Score=39.39  Aligned_cols=36  Identities=28%  Similarity=0.381  Sum_probs=30.8

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecCh
Q 017916          180 GPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDD  216 (364)
Q Consensus       180 ~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~  216 (364)
                      +.+.+|+|.|+|..|+.++..++..|. .+.+++.++
T Consensus        47 ~~~k~VvIIGaGpAGl~aA~~l~~~G~-~v~l~E~~~   82 (233)
T d1djqa3          47 KNKDSVLIVGAGPSGSEAARVLMESGY-TVHLTDTAE   82 (233)
T ss_dssp             SSCCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSS
T ss_pred             cCCceEEEEcccHHHHHHHHHHHHhcc-ceeeEeecc
Confidence            567899999999999999999999999 577776544

>d2ex4a1 c.66.1.42 (A:2-224) Adrenal gland protein AD-003 (C9orf32) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: AD-003 protein-like
domain: Adrenal gland protein AD-003 (C9orf32)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.15  E-value=0.57  Score=36.92  Aligned_cols=98  Identities=19%  Similarity=0.107  Sum_probs=62.7

Q ss_pred             CCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcC----CCeEEecCCCcccHHHHHHHHHHHcCC
Q 017916          178 NIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELG----ADNIVKVSTNLQDIAEEVEKIQKAMGT  253 (364)
Q Consensus       178 ~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg----~~~~~~~~~~~~~~~~~i~~~~~~~~~  253 (364)
                      ..+++.+||-.|+|. |..+..+++..+. .|.+++.+++-.+.+++.-    ...+--+...-.+       +. ....
T Consensus        57 ~~~~~~~vLDiGcG~-G~~~~~l~~~~~~-~v~~vD~s~~~l~~ak~~~~~~~~~~~~f~~~d~~~-------~~-~~~~  126 (222)
T d2ex4a1          57 NKTGTSCALDCGAGI-GRITKRLLLPLFR-EVDMVDITEDFLVQAKTYLGEEGKRVRNYFCCGLQD-------FT-PEPD  126 (222)
T ss_dssp             -CCCCSEEEEETCTT-THHHHHTTTTTCS-EEEEEESCHHHHHHHHHHTGGGGGGEEEEEECCGGG-------CC-CCSS
T ss_pred             CCCCCCEEEEeccCC-CHhhHHHHHhcCC-EEEEeecCHHHhhccccccccccccccccccccccc-------cc-cccc
Confidence            456778999998765 6677777665554 7999999999888887642    2221101111111       11 1145


Q ss_pred             CccEEEEC-----CCCH---HHHHHHHHhcccCCEEEEEc
Q 017916          254 GIDVSFDC-----AGFN---KTMSTALSATRAGGKVCLVG  285 (364)
Q Consensus       254 ~~d~vid~-----~g~~---~~~~~~~~~l~~~G~~v~~g  285 (364)
                      .+|+|+..     ...+   ..+..+.+.|+|+|.++...
T Consensus       127 ~fD~I~~~~~l~h~~~~~~~~~l~~i~~~Lk~~G~~~i~~  166 (222)
T d2ex4a1         127 SYDVIWIQWVIGHLTDQHLAEFLRRCKGSLRPNGIIVIKD  166 (222)
T ss_dssp             CEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             cccccccccccccchhhhhhhHHHHHHHhcCCcceEEEEE
Confidence            78999863     2222   46788999999999998764

>d1b5qa1 c.3.1.2 (A:5-293,A:406-463) Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Polyamine oxidase
species: Maize (Zea mays) [TaxId: 4577]

Probab=89.15  E-value=0.17  Score=40.73  Aligned_cols=33  Identities=24%  Similarity=0.482  Sum_probs=27.8

Q ss_pred             EEEEEcCCHHHHHHHHHHHHCCCCEEEEEecCh
Q 017916          184 NVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDD  216 (364)
Q Consensus       184 ~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~  216 (364)
                      +|+|.|+|..|++++..++..|.+.|.+++.++
T Consensus         2 ~V~IIGaG~aGL~aA~~L~~~G~~~V~vlE~~~   34 (347)
T d1b5qa1           2 RVIVVGAGMSGISAAKRLSEAGITDLLILEATD   34 (347)
T ss_dssp             CEEEECCBHHHHHHHHHHHHTTCCCEEEECSSS
T ss_pred             CEEEECCcHHHHHHHHHHHhCCCCcEEEEECCC
Confidence            489999999999999999999975577887654

>d1xtpa_ c.66.1.42 (A:) Hypothetical protein Lmaj004091aaa (LmjF30.0810) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: AD-003 protein-like
domain: Hypothetical protein Lmaj004091aaa (LmjF30.0810)
species: Leishmania major [TaxId: 5664]

Probab=89.09  E-value=0.72  Score=37.31  Aligned_cols=102  Identities=15%  Similarity=-0.001  Sum_probs=66.0

Q ss_pred             HHHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHc-CCCeEEecC-CCcccHHHHHHHHHHHc
Q 017916          174 CRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKEL-GADNIVKVS-TNLQDIAEEVEKIQKAM  251 (364)
Q Consensus       174 l~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~l-g~~~~~~~~-~~~~~~~~~i~~~~~~~  251 (364)
                      ++.....++.+||=.|+|. |..+..++..... .|.+++.+++-.+.+++. .-.....+. ..-+++       . ..
T Consensus        86 l~~l~~~~~~~vLD~GcG~-G~~t~~ll~~~~~-~v~~vD~s~~~l~~a~~~~~~~~~~~~~~~d~~~~-------~-~~  155 (254)
T d1xtpa_          86 IASLPGHGTSRALDCGAGI-GRITKNLLTKLYA-TTDLLEPVKHMLEEAKRELAGMPVGKFILASMETA-------T-LP  155 (254)
T ss_dssp             HHTSTTCCCSEEEEETCTT-THHHHHTHHHHCS-EEEEEESCHHHHHHHHHHTTTSSEEEEEESCGGGC-------C-CC
T ss_pred             HhhCCCCCCCeEEEecccC-ChhhHHHHhhcCc-eEEEEcCCHHHHHhhhccccccccceeEEcccccc-------c-cC
Confidence            3455556778999998765 7778888876554 789999999988888763 222222221 111111       0 01


Q ss_pred             CCCccEEEECC-----CCH---HHHHHHHHhcccCCEEEEEc
Q 017916          252 GTGIDVSFDCA-----GFN---KTMSTALSATRAGGKVCLVG  285 (364)
Q Consensus       252 ~~~~d~vid~~-----g~~---~~~~~~~~~l~~~G~~v~~g  285 (364)
                      .+.+|+|+..-     ...   ..+..+.+.|+++|.++...
T Consensus       156 ~~~fD~I~~~~vl~hl~d~d~~~~l~~~~~~LkpgG~iii~e  197 (254)
T d1xtpa_         156 PNTYDLIVIQWTAIYLTDADFVKFFKHCQQALTPNGYIFFKE  197 (254)
T ss_dssp             SSCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             CCccceEEeeccccccchhhhHHHHHHHHHhcCCCcEEEEEe
Confidence            35799998632     212   45778999999999998753

>d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Rck domain from putative potassium channel Kch
species: Escherichia coli [TaxId: 562]

Probab=88.99  E-value=3  Score=30.22  Aligned_cols=95  Identities=11%  Similarity=0.105  Sum_probs=55.0

Q ss_pred             CCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhH-HHHHHH---cCCCeEEecCCCcccHHHHHHHHHHHcCCCccE
Q 017916          182 ETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYR-LSVAKE---LGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDV  257 (364)
Q Consensus       182 g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~-~~~~~~---lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~  257 (364)
                      -++|+|.|.|.+|..+++.+...|.+ +++++.++++ .+.+.+   .|.. ++.=+...   .+.+++.   .-...+.
T Consensus         3 knHiII~G~g~~g~~l~~~L~~~~~~-v~vId~d~~~~~~~~~~~~~~~~~-vi~Gd~~d---~~~L~~a---~i~~a~~   74 (153)
T d1id1a_           3 KDHFIVCGHSILAINTILQLNQRGQN-VTVISNLPEDDIKQLEQRLGDNAD-VIPGDSND---SSVLKKA---GIDRCRA   74 (153)
T ss_dssp             CSCEEEECCSHHHHHHHHHHHHTTCC-EEEEECCCHHHHHHHHHHHCTTCE-EEESCTTS---HHHHHHH---TTTTCSE
T ss_pred             CCEEEEECCCHHHHHHHHHHHHcCCC-EEEEeccchhHHHHHHHhhcCCcE-EEEccCcc---hHHHHHh---ccccCCE
Confidence            46899999999999999999999995 5566665543 333333   2343 22212222   2223332   3457899


Q ss_pred             EEECCCCHHHHH---HHHHhcccCCEEEEE
Q 017916          258 SFDCAGFNKTMS---TALSATRAGGKVCLV  284 (364)
Q Consensus       258 vid~~g~~~~~~---~~~~~l~~~G~~v~~  284 (364)
                      ++-++++.+.-.   ...+.+.+.-+++.-
T Consensus        75 vi~~~~~d~~n~~~~~~~r~~~~~~~iia~  104 (153)
T d1id1a_          75 ILALSDNDADNAFVVLSAKDMSSDVKTVLA  104 (153)
T ss_dssp             EEECSSCHHHHHHHHHHHHHHTSSSCEEEE
T ss_pred             EEEccccHHHHHHHHHHHHHhCCCCceEEE
Confidence            998888533211   223344555555543

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

Probab=88.94  E-value=0.53  Score=39.69  Aligned_cols=35  Identities=23%  Similarity=0.163  Sum_probs=27.7

Q ss_pred             EEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhH
Q 017916          184 NVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYR  218 (364)
Q Consensus       184 ~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~  218 (364)
                      +|||+|+ |-+|...++.+...|...|++++....+
T Consensus         2 KILITG~tGfiG~~l~~~Ll~~g~~~V~~ld~~~~~   37 (342)
T d2blla1           2 RVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDA   37 (342)
T ss_dssp             EEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGG
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcc
Confidence            6999998 9999999988878885467887665443

>d2dula1 c.66.1.58 (A:3-377) N(2),N(2)-dimethylguanosine tRNA methyltransferase Trm1 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: TRM1-like
domain: N(2),N(2)-dimethylguanosine tRNA methyltransferase Trm1
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=88.94  E-value=1.4  Score=37.82  Aligned_cols=93  Identities=16%  Similarity=0.123  Sum_probs=62.2

Q ss_pred             cCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHH---c-CCCeEE--------ecC----CCcccHHHHHHHHHHHcC
Q 017916          189 GAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKE---L-GADNIV--------KVS----TNLQDIAEEVEKIQKAMG  252 (364)
Q Consensus       189 Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~---l-g~~~~~--------~~~----~~~~~~~~~i~~~~~~~~  252 (364)
                      +-+++|.-++++|+..|++.|+..|.+++..+++++   + +.....        .-.    ....|....+    ...+
T Consensus        52 ~~sasG~rsiRya~E~~~~~V~~nDis~~A~~~i~~N~~lN~~~~~~~~~~~~~~~~~~~~~~~~~Da~~~~----~~~~  127 (375)
T d2dula1          52 ALSATGIRGIRFALETPAEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGEKTIVINHDDANRLM----AERH  127 (375)
T ss_dssp             SSCTTSHHHHHHHHHSSCSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESSSEEEEEESCHHHHH----HHST
T ss_pred             cCCCccHHHHHHHHhCCCCEEEEecCCHHHHHHHHHHHHhcCccccccccccccccccceeEeehhhhhhhh----Hhhc
Confidence            336678899999999999889999999988888764   2 221100        000    0112322222    2235


Q ss_pred             CCccEE-EECCCC-HHHHHHHHHhcccCCEEEEEc
Q 017916          253 TGIDVS-FDCAGF-NKTMSTALSATRAGGKVCLVG  285 (364)
Q Consensus       253 ~~~d~v-id~~g~-~~~~~~~~~~l~~~G~~v~~g  285 (364)
                      ..+|+| ||..|+ ...++.++++++.+|.+....
T Consensus       128 ~~fDvIDiDPfGs~~pfldsAi~a~~~~Gll~vTa  162 (375)
T d2dula1         128 RYFHFIDLDPFGSPMEFLDTALRSAKRRGILGVTA  162 (375)
T ss_dssp             TCEEEEEECCSSCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred             CcCCcccCCCCCCcHHHHHHHHHHhccCCEEEEEe
Confidence            679976 799998 467778999999999887764

>d1tw3a2 c.66.1.12 (A:99-351) Carminomycin 4-O-methyltransferase {Streptomyces peucetius [TaxId: 1950]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Plant O-methyltransferase, C-terminal domain
domain: Carminomycin 4-O-methyltransferase
species: Streptomyces peucetius [TaxId: 1950]

Probab=88.73  E-value=0.92  Score=36.53  Aligned_cols=101  Identities=17%  Similarity=0.172  Sum_probs=61.4

Q ss_pred             HHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHH----HHcCCCeEEecCCCcccHHHHHHHHHHH
Q 017916          175 RRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA----KELGADNIVKVSTNLQDIAEEVEKIQKA  250 (364)
Q Consensus       175 ~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~----~~lg~~~~~~~~~~~~~~~~~i~~~~~~  250 (364)
                      +...+....+||=.|+|. |..++.+++...--.+++++.+ +..+.+    .+.+...-+.+..  .|+.       ..
T Consensus        74 ~~~d~~~~~~VLDvGcG~-G~~~~~la~~~p~~~~~~~D~~-~~~~~a~~~~~~~~~~~rv~~~~--~D~~-------~~  142 (253)
T d1tw3a2          74 AAYDWTNVRHVLDVGGGK-GGFAAAIARRAPHVSATVLEMA-GTVDTARSYLKDEGLSDRVDVVE--GDFF-------EP  142 (253)
T ss_dssp             HHSCCTTCSEEEEETCTT-SHHHHHHHHHCTTCEEEEEECT-THHHHHHHHHHHTTCTTTEEEEE--CCTT-------SC
T ss_pred             hhcCCccCCEEEEeCCCC-CHHHHHHHHhcceeEEEEccCH-HHHHHHHHHHHHhhcccchhhcc--ccch-------hh
Confidence            556677788999998765 7888899998754477888764 333333    3334321111100  1110       01


Q ss_pred             cCCCccEEEECC-----CCH---HHHHHHHHhcccCCEEEEEcC
Q 017916          251 MGTGIDVSFDCA-----GFN---KTMSTALSATRAGGKVCLVGM  286 (364)
Q Consensus       251 ~~~~~d~vid~~-----g~~---~~~~~~~~~l~~~G~~v~~g~  286 (364)
                      ...++|+|+-..     ...   ..++.+.++|+|+|+++....
T Consensus       143 ~~~~~D~v~~~~vlh~~~d~~~~~~L~~~~~~LkPGG~l~i~e~  186 (253)
T d1tw3a2         143 LPRKADAIILSFVLLNWPDHDAVRILTRCAEALEPGGRILIHER  186 (253)
T ss_dssp             CSSCEEEEEEESCGGGSCHHHHHHHHHHHHHTEEEEEEEEEEEC
T ss_pred             cccchhheeeccccccCCchhhHHHHHHHHHhcCCCcEEEEEec
Confidence            135689987432     212   457889999999999998764

>d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-glycerate dehydrogenase
species: Hyphomicrobium methylovorum [TaxId: 84]

Probab=88.49  E-value=0.7  Score=35.63  Aligned_cols=90  Identities=17%  Similarity=0.088  Sum_probs=56.7

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcCCCccEEEE
Q 017916          181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  260 (364)
Q Consensus       181 ~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid  260 (364)
                      .|.++.|.|.|.+|...+++++.+|. .++..+............+...   +    .++.+.+        ...|+|..
T Consensus        46 ~g~tvgIiG~G~IG~~va~~l~~fg~-~v~~~d~~~~~~~~~~~~~~~~---~----~~l~~ll--------~~sD~v~l  109 (191)
T d1gdha1          46 DNKTLGIYGFGSIGQALAKRAQGFDM-DIDYFDTHRASSSDEASYQATF---H----DSLDSLL--------SVSQFFSL  109 (191)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHTTTC-EEEEECSSCCCHHHHHHHTCEE---C----SSHHHHH--------HHCSEEEE
T ss_pred             cccceEEeecccchHHHHHHHHhhcc-ccccccccccccchhhcccccc---c----CCHHHHH--------hhCCeEEe
Confidence            37999999999999999999999999 5777766544333323323221   1    1222222        23578776


Q ss_pred             CCC-CHHH---H-HHHHHhcccCCEEEEEcC
Q 017916          261 CAG-FNKT---M-STALSATRAGGKVCLVGM  286 (364)
Q Consensus       261 ~~g-~~~~---~-~~~~~~l~~~G~~v~~g~  286 (364)
                      ++. ++++   + ...++.|+++..+|.++.
T Consensus       110 ~~plt~~T~~li~~~~l~~mk~~a~lIN~sR  140 (191)
T d1gdha1         110 NAPSTPETRYFFNKATIKSLPQGAIVVNTAR  140 (191)
T ss_dssp             CCCCCTTTTTCBSHHHHTTSCTTEEEEECSC
T ss_pred             cCCCCchHhheecHHHhhCcCCccEEEecCC
Confidence            442 2211   1 256788888888887754

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

Probab=88.29  E-value=0.88  Score=37.31  Aligned_cols=33  Identities=27%  Similarity=0.433  Sum_probs=26.4

Q ss_pred             CCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecC
Q 017916          182 ETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVD  215 (364)
Q Consensus       182 g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~  215 (364)
                      -.+|||+|+ |-+|...+..+...|.+ |+++.++
T Consensus         3 k~KILVtGatG~iG~~l~~~L~~~G~~-V~~~~R~   36 (312)
T d1qyda_           3 KSRVLIVGGTGYIGKRIVNASISLGHP-TYVLFRP   36 (312)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCC-EEEECCS
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCE-EEEEECC
Confidence            467999998 99999999988889985 5555443

>d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Plasmodium falciparum [TaxId: 5833]

Probab=88.17  E-value=0.53  Score=33.08  Aligned_cols=39  Identities=21%  Similarity=0.256  Sum_probs=31.3

Q ss_pred             cCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecCh
Q 017916          177 ANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDD  216 (364)
Q Consensus       177 ~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~  216 (364)
                      ..++...+|+|.|+|.+|.=+++.++.+|. .|..+.+.+
T Consensus        17 ~~l~~p~~v~IiGgG~iG~E~A~~l~~~g~-~Vtlv~~~~   55 (117)
T d1onfa2          17 FNIKESKKIGIVGSGYIAVELINVIKRLGI-DSYIFARGN   55 (117)
T ss_dssp             TTCCCCSEEEEECCSHHHHHHHHHHHTTTC-EEEEECSSS
T ss_pred             hccCCCCEEEEECCchHHHHHHHHHHhccc-cceeeehhc
Confidence            345567899999999999999999999999 566665543

>d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=88.17  E-value=0.42  Score=36.38  Aligned_cols=41  Identities=17%  Similarity=0.196  Sum_probs=31.0

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHH
Q 017916          180 GPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA  222 (364)
Q Consensus       180 ~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~  222 (364)
                      -+|.+|||.|+|+++.+++.-+...|  .+.++.++.+|.+.+
T Consensus        16 ~~~k~vlIlGaGG~arai~~aL~~~~--~i~I~nR~~~ka~~l   56 (177)
T d1nvta1          16 VKDKNIVIYGAGGAARAVAFELAKDN--NIIIANRTVEKAEAL   56 (177)
T ss_dssp             CCSCEEEEECCSHHHHHHHHHHTSSS--EEEEECSSHHHHHHH
T ss_pred             cCCCEEEEECCcHHHHHHHHHHcccc--ceeeehhhhhHHHHH
Confidence            46789999999999998776664444  678888887776543

>d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Thermotoga maritima [TaxId: 2336]

Probab=88.06  E-value=2  Score=28.26  Aligned_cols=47  Identities=19%  Similarity=0.345  Sum_probs=35.0

Q ss_pred             CEEEEEcCCHHHHHH-HHHHHHCCCCEEEEEecCh-hHHHHHHHcCCCeE
Q 017916          183 TNVLIMGAGPIGLVT-MLGARAFGAPRIVIVDVDD-YRLSVAKELGADNI  230 (364)
Q Consensus       183 ~~VLI~Gag~~G~~a-i~la~~~g~~~vv~~~~~~-~~~~~~~~lg~~~~  230 (364)
                      .+|-+.|-|++|+.+ +++++..|+ .|.+.|..+ +..+.++++|+...
T Consensus         2 ~~ihfiGIgG~GMs~LA~~L~~~G~-~VsGSD~~~~~~t~~L~~~Gi~i~   50 (89)
T d1j6ua1           2 MKIHFVGIGGIGMSAVALHEFSNGN-DVYGSNIEETERTAYLRKLGIPIF   50 (89)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-EEEEECSSCCHHHHHHHHTTCCEE
T ss_pred             cEEEEEeECHHHHHHHHHHHHhCCC-eEEEEeCCCChhHHHHHHCCCeEE
Confidence            356677877778755 688889999 788888765 45667888998643

>d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: L-aminoacid oxidase
species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]

Probab=88.01  E-value=0.29  Score=40.84  Aligned_cols=37  Identities=22%  Similarity=0.423  Sum_probs=30.8

Q ss_pred             CCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecCh
Q 017916          179 IGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDD  216 (364)
Q Consensus       179 ~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~  216 (364)
                      .....+|+|.|+|..|++++..++..|. .|.+++.++
T Consensus        27 ~~~pkkV~IIGaG~aGLsaA~~L~~~G~-~V~vlE~~~   63 (370)
T d2iida1          27 TSNPKHVVIVGAGMAGLSAAYVLAGAGH-QVTVLEASE   63 (370)
T ss_dssp             CSSCCEEEEECCBHHHHHHHHHHHHHTC-EEEEECSSS
T ss_pred             CCCCCeEEEECCCHHHHHHHHHHHHCCC-CEEEEeCCC
Confidence            3455799999999999999999998998 688887643

>d1gtea3 c.3.1.1 (A:288-440) Dihydropyrimidine dehydrogenase, domain 3 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 3
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=88.00  E-value=0.44  Score=35.39  Aligned_cols=36  Identities=25%  Similarity=0.332  Sum_probs=30.5

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecC
Q 017916          180 GPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVD  215 (364)
Q Consensus       180 ~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~  215 (364)
                      .-+++|+|.|+|.+|.=++..+..+|++.|..+.+.
T Consensus        43 ~~~~kVvVIGGGdtA~D~A~~a~r~GA~~V~vi~rr   78 (153)
T d1gtea3          43 SIRGAVIVLGAGDTAFDCATSALRCGARRVFLVFRK   78 (153)
T ss_dssp             CCCSEEEEECSSHHHHHHHHHHHHTTCSEEEEECSS
T ss_pred             cCCCEEEEECCChhHHHHHHHHHHcCCcceeEEEeC
Confidence            346789999999999999999999999877777543

>d1z7wa1 c.79.1.1 (A:3-322) O-acetylserine sulfhydrylase (Cysteine synthase) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=87.99  E-value=4.1  Score=33.74  Aligned_cols=112  Identities=22%  Similarity=0.191  Sum_probs=69.6

Q ss_pred             HHHcCCCCCCEEEEE-cCCHHHHHHHHHHHHCCCCEEEEEe--cChhHHHHHHHcCCCeEEec-----------------
Q 017916          174 CRRANIGPETNVLIM-GAGPIGLVTMLGARAFGAPRIVIVD--VDDYRLSVAKELGADNIVKV-----------------  233 (364)
Q Consensus       174 l~~~~~~~g~~VLI~-Gag~~G~~ai~la~~~g~~~vv~~~--~~~~~~~~~~~lg~~~~~~~-----------------  233 (364)
                      .+...++++...+|. .+|..|.+.+..|+.+|.+.++++.  .+..|.+.++.+|+..+..-                 
T Consensus        56 ~~~g~~~~~~~~vv~aSsGN~g~a~A~~a~~~g~~~~iv~p~~~~~~k~~~i~~~Ga~vi~~~~~~~~~~~~~~~~~~~~  135 (320)
T d1z7wa1          56 EKKGLIKPGESVLIEPTSGNTGVGLAFTAAAKGYKLIITMPASMSTERRIILLAFGVELVLTDPAKGMKGAIAKAEEILA  135 (320)
T ss_dssp             HHTTSCCTTTCEEEEECSSHHHHHHHHHHHHHTCEEEEEEETTSCHHHHHHHHHTTCEEEEECGGGHHHHHHHHHHHHHH
T ss_pred             HHcCCCCCCCceEEeeCCchHHHHHHHHHHhhccceEEeehhhhhhhhhhhhhccCcceEEeeccccccccchhHHHHHH
Confidence            345666676665555 5699999999999999997666553  35678888899998643210                 


Q ss_pred             --------CC--CcccHHH----HHHHHHHHcCCCccEEEECCCCHHHHHHHHH---hcccCCEEEEEc
Q 017916          234 --------ST--NLQDIAE----EVEKIQKAMGTGIDVSFDCAGFNKTMSTALS---ATRAGGKVCLVG  285 (364)
Q Consensus       234 --------~~--~~~~~~~----~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~---~l~~~G~~v~~g  285 (364)
                              +.  +..++..    ...++.......+|.++-++|++.++.-.++   ...+.-+++.+.
T Consensus       136 ~~~~~~~~~~~~~~~n~~~g~~t~~~EI~~q~~~~~D~vv~~vGgGg~~~Gi~~~~k~~~~~~~~igve  204 (320)
T d1z7wa1         136 KTPNGYMLQQFENPANPKIHYETTGPEIWKGTGGKIDGFVSGIGTGGTITGAGKYLKEQNANVKLYGVE  204 (320)
T ss_dssp             HCTTEEECCTTTCTHHHHHHHHTHHHHHHHHTTTCCCEEEEECSSSHHHHHHHHHHHHHCTTCEEEEEE
T ss_pred             hCCCceecccccccchHHHhhhhHHHHHHHhccCCCCEEEeCCCCCcccchhhhhhhhhhcceeeeccc
Confidence                    00  0001111    1122333335578999999988766554444   445666776554

>d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=87.98  E-value=3.4  Score=29.85  Aligned_cols=73  Identities=21%  Similarity=0.226  Sum_probs=45.1

Q ss_pred             CEEEEEcC-CHHHHHHHHHHHHCCC-CEEEEEecChhHHHHHHHcCCCe---EEecCCCcccHHHHHHHHHHHcCCCccE
Q 017916          183 TNVLIMGA-GPIGLVTMLGARAFGA-PRIVIVDVDDYRLSVAKELGADN---IVKVSTNLQDIAEEVEKIQKAMGTGIDV  257 (364)
Q Consensus       183 ~~VLI~Ga-g~~G~~ai~la~~~g~-~~vv~~~~~~~~~~~~~~lg~~~---~~~~~~~~~~~~~~i~~~~~~~~~~~d~  257 (364)
                      .+|.|.|| |.+|...+.++...+. +.++.++..+.+-+.+.-.-+..   ...+. ...+..+.+        .+.|+
T Consensus         1 sKv~IiGA~G~VG~~~A~~l~~~~~~~elvLiDi~~~~~~a~Dl~~~~~~~~~~~~~-~~~~~~~~~--------~~aDi   71 (144)
T d1mlda1           1 AKVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVAADLSHIETRATVKGYL-GPEQLPDCL--------KGCDV   71 (144)
T ss_dssp             CEEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHHHHHHHTTSSSSCEEEEEE-SGGGHHHHH--------TTCSE
T ss_pred             CeEEEECCCChHHHHHHHHHHhCCccceEEEEeccccchhhHHHhhhhhhcCCCeEE-cCCChHHHh--------CCCCE
Confidence            37889997 9999999999988776 67888887665544332221211   11111 112222222        57899


Q ss_pred             EEECCCC
Q 017916          258 SFDCAGF  264 (364)
Q Consensus       258 vid~~g~  264 (364)
                      ++-+.|.
T Consensus        72 vVitag~   78 (144)
T d1mlda1          72 VVIPAGV   78 (144)
T ss_dssp             EEECCSC
T ss_pred             EEECCCc
Confidence            9998884

>d1tdja1 c.79.1.1 (A:5-335) Threonine deaminase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: Threonine deaminase
species: Escherichia coli [TaxId: 562]

Probab=87.92  E-value=1.6  Score=36.53  Aligned_cols=114  Identities=11%  Similarity=0.127  Sum_probs=67.9

Q ss_pred             HHHHHHH-cCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEec--ChhHHHHHHHcCCCeEEecCCC----------
Q 017916          170 GLHACRR-ANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDV--DDYRLSVAKELGADNIVKVSTN----------  236 (364)
Q Consensus       170 a~~~l~~-~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~--~~~~~~~~~~lg~~~~~~~~~~----------  236 (364)
                      |++.+.. ..-.+..+|+...+|..|.+++..++.+|.+.++++..  +.+|...++.+|++-+. +...          
T Consensus        62 a~~~i~~~~~~~~~~~vv~assGN~g~a~A~~a~~~g~~~~i~~p~~~~~~k~~~l~~~Ga~vi~-~~~~~~~~~~~~~~  140 (331)
T d1tdja1          62 AYAMMAGLTEEQKAHGVITASAGNHAQGVAFSSARLGVKALIVMPTATADIKVDAVRGFGGEVLL-HGANFDEAKAKAIE  140 (331)
T ss_dssp             HHHHHHTTTTSSCSSSCEEEECSSSHHHHHHHHHHTTCCEEEECCSSCCHHHHHHHHHHSCEEEC-CCSSHHHHHHHHHH
T ss_pred             HHHHHHHHHHhCCCCeeeecccchhHHHHHHhhccccccceeeccccchhHHHHHHHhcCCEEEE-cCcccccchhhhhh
Confidence            3444443 22234455666666888999999999999986666633  55788888999987432 2111          


Q ss_pred             --------------cccHHH----HHHHHHHHcCCCccEEEECCCCHHHHHHHHH---hcccCCEEEEEc
Q 017916          237 --------------LQDIAE----EVEKIQKAMGTGIDVSFDCAGFNKTMSTALS---ATRAGGKVCLVG  285 (364)
Q Consensus       237 --------------~~~~~~----~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~---~l~~~G~~v~~g  285 (364)
                                    ......    ...++.+. ...+|++|-++|++.++.-++.   .+.+.-+++.+.
T Consensus       141 ~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~q-~~~~D~vv~~~G~GG~~aG~~~~~~~~~~~~~ii~ve  209 (331)
T d1tdja1         141 LSQQQGFTWVPPFDHPMVIAGQGTLALELLQQ-DAHLDRVFVPVGGGGLAAGVAVLIKQLMPQIKVIAVE  209 (331)
T ss_dssp             HHHHHCCEECCSSCCHHHHHHHHHHHHHHHHH-CTTCCEEEEECSSSHHHHHHHHHHHHHCTTCEEEEEE
T ss_pred             hhhcCCCccccccCChHHhhhhhhHHHHHHHh-cCCCCEEEEeCChhHHHHHHHHHHHHhCCCcEEEEec
Confidence                          111111    11111122 3468999999987665554444   445666777664

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=87.82  E-value=2.6  Score=35.14  Aligned_cols=35  Identities=14%  Similarity=-0.005  Sum_probs=25.8

Q ss_pred             CCEEEEEcC---CHHHHHHHHHHHHCCCCEEEEEecChh
Q 017916          182 ETNVLIMGA---GPIGLVTMLGARAFGAPRIVIVDVDDY  217 (364)
Q Consensus       182 g~~VLI~Ga---g~~G~~ai~la~~~g~~~vv~~~~~~~  217 (364)
                      ++..||+|+   .++|.+.++.+...|++ |+.+..+..
T Consensus         2 ~kVAlITGaa~s~GIG~aiA~~la~~GA~-V~i~~~~~~   39 (329)
T d1uh5a_           2 EDICFIAGIGDTNGYGWGIAKELSKRNVK-IIFGIWPPV   39 (329)
T ss_dssp             CCEEEEECCSSSSSHHHHHHHHHHHTTCE-EEEEECGGG
T ss_pred             CcEEEEeCCCCCChHHHHHHHHHHHcCCE-EEEEeCchh
Confidence            456788994   38999999999999995 555544443

>d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Short chain L-3-hydroxyacyl CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.58  E-value=0.67  Score=35.77  Aligned_cols=38  Identities=29%  Similarity=0.380  Sum_probs=32.3

Q ss_pred             CEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHH
Q 017916          183 TNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSV  221 (364)
Q Consensus       183 ~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~  221 (364)
                      .+|.|.|+|.+|...++++...|+ .|+..+.+++..+.
T Consensus         5 kkvaViGaG~mG~~iA~~~a~~G~-~V~l~D~~~~~l~~   42 (192)
T d1f0ya2           5 KHVTVIGGGLMGAGIAQVAAATGH-TVVLVDQTEDILAK   42 (192)
T ss_dssp             CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHH
T ss_pred             EEEEEECcCHHHHHHHHHHHhCCC-cEEEEECChHHHHH
Confidence            489999999999999999999999 68888888865443

>d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=87.46  E-value=0.54  Score=32.90  Aligned_cols=35  Identities=20%  Similarity=0.411  Sum_probs=28.8

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecCh
Q 017916          181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDD  216 (364)
Q Consensus       181 ~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~  216 (364)
                      ...+++|.|+|.+|.-+++.+..+|.+ |..+.+.+
T Consensus        21 ~p~~v~IiGgG~ig~E~A~~l~~~G~~-Vtlve~~~   55 (117)
T d1ebda2          21 VPKSLVVIGGGYIGIELGTAYANFGTK-VTILEGAG   55 (117)
T ss_dssp             CCSEEEEECCSHHHHHHHHHHHHTTCE-EEEEESSS
T ss_pred             cCCeEEEECCCccceeeeeeecccccE-EEEEEecc
Confidence            347999999999999999999999995 56665544

>d1v71a1 c.79.1.1 (A:6-323) Hypothetical protein C320.14 (SPCC320.14, SPCC330.15c) {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: Hypothetical protein C320.14 (SPCC320.14, SPCC330.15c)
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=87.38  E-value=0.9  Score=37.94  Aligned_cols=99  Identities=19%  Similarity=0.241  Sum_probs=60.9

Q ss_pred             EEEc-CCHHHHHHHHHHHHCCCCEEEEEec--ChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHc-----------
Q 017916          186 LIMG-AGPIGLVTMLGARAFGAPRIVIVDV--DDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAM-----------  251 (364)
Q Consensus       186 LI~G-ag~~G~~ai~la~~~g~~~vv~~~~--~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~-----------  251 (364)
                      ++.+ +|..|.+++..|+.+|.+.++++..  ++++.+.++.+|++-+. ++....+.....++..+..           
T Consensus        72 vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~~~~k~~~l~~~Ga~vi~-~~~~~~~~~~~a~~~a~~~g~~~~~~~~~~  150 (318)
T d1v71a1          72 VLTFSSGNHAQAIALSAKILGIPAKIIMPLDAPEAKVAATKGYGGQVIM-YDRYKDDREKMAKEISEREGLTIIPPYDHP  150 (318)
T ss_dssp             EEECCSSHHHHHHHHHHHHTTCCEEEEEETTCCHHHHHHHHHTTCEEEE-ECTTTTCHHHHHHHHHHHHTCBCCCSSSSH
T ss_pred             eeeeccchhhHHHHHhhcccccceeecccccccHHHHHHHHHcCCcEEe-ccCCchHHHHHHHHHHHhcCCEecCCcccc
Confidence            4444 4999999999999999987666643  55778888899987543 3222223322222222211           


Q ss_pred             ----------------CCCccEEEECCCCHHHHHH---HHHhcccCCEEEEEc
Q 017916          252 ----------------GTGIDVSFDCAGFNKTMST---ALSATRAGGKVCLVG  285 (364)
Q Consensus       252 ----------------~~~~d~vid~~g~~~~~~~---~~~~l~~~G~~v~~g  285 (364)
                                      -+.+|++|-++|++.++.-   .++.+.+..+++.+.
T Consensus       151 ~~~~g~~t~~~Ei~~q~~~~d~vvv~~G~GG~~~Gi~~~~~~~~~~~~ii~v~  203 (318)
T d1v71a1         151 HVLAGQGTAAKELFEEVGPLDALFVCLGGGGLLSGSALAARHFAPNCEVYGVE  203 (318)
T ss_dssp             HHHHHHTHHHHHHHHHHCCCSEEEEECSSSHHHHHHHHHHHHHCTTCEEEEEE
T ss_pred             ccccccchHHHHHHHhcCCCCEEEEcCCchHHHHHHHHHHHhhCCCceeeccc
Confidence                            1347888888877644443   344556667776653

>d1v9la1 c.2.1.7 (A:180-421) Glutamate dehydrogenase {Pyrobaculum islandicum [TaxId: 2277]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Pyrobaculum islandicum [TaxId: 2277]

Probab=87.22  E-value=0.93  Score=36.37  Aligned_cols=33  Identities=27%  Similarity=0.362  Sum_probs=29.0

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEe
Q 017916          180 GPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVD  213 (364)
Q Consensus       180 ~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~  213 (364)
                      -.|.+|+|.|.|.+|..+++++...|+ ++++++
T Consensus        29 l~g~~v~IqGfGnVG~~~a~~L~~~Ga-kvv~vs   61 (242)
T d1v9la1          29 IEGKTVAIQGMGNVGRWTAYWLEKMGA-KVIAVS   61 (242)
T ss_dssp             CTTCEEEEECCSHHHHHHHHHHHTTTC-EEEEEE
T ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEee
Confidence            478999999999999999999999999 566654

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=86.88  E-value=1.7  Score=36.54  Aligned_cols=30  Identities=33%  Similarity=0.412  Sum_probs=25.0

Q ss_pred             CEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEe
Q 017916          183 TNVLIMGA-GPIGLVTMLGARAFGAPRIVIVD  213 (364)
Q Consensus       183 ~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~  213 (364)
                      ..|||+|+ |-+|...+..+...|. .|++++
T Consensus         2 K~ILVTGatGfIG~~lv~~Ll~~g~-~V~~~d   32 (347)
T d1z45a2           2 KIVLVTGGAGYIGSHTVVELIENGY-DCVVAD   32 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEE
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcC-eEEEEE
Confidence            36899998 9999999999888898 566664

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=86.72  E-value=0.28  Score=42.08  Aligned_cols=31  Identities=26%  Similarity=0.310  Sum_probs=26.9

Q ss_pred             EEEEEcC-CHHHHHHHHHHHHCCCCEEEEEec
Q 017916          184 NVLIMGA-GPIGLVTMLGARAFGAPRIVIVDV  214 (364)
Q Consensus       184 ~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~  214 (364)
                      +|||+|+ |-+|...+..+...|..++++++.
T Consensus         2 kILItG~tGfIGs~l~~~L~~~g~~vv~~~d~   33 (361)
T d1kewa_           2 KILITGGAGFIGSAVVRHIIKNTQDTVVNIDK   33 (361)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHHCSCEEEEEEC
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCCEEEEEeC
Confidence            7999998 999999999888889987787764

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

Probab=86.50  E-value=0.62  Score=39.68  Aligned_cols=32  Identities=19%  Similarity=0.045  Sum_probs=26.4

Q ss_pred             CEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecC
Q 017916          183 TNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVD  215 (364)
Q Consensus       183 ~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~  215 (364)
                      ..|||+|+ |-+|...+..+...|. .|+++++.
T Consensus         2 K~vLITGatGfiGs~lv~~Ll~~g~-~V~~~~r~   34 (357)
T d1db3a_           2 KVALITGVTGQDGSYLAEFLLEKGY-EVHGIKRR   34 (357)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-EEEEECC-
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcC-EEEEEECC
Confidence            46889998 9999999999988898 67787763

>d1wkva1 c.79.1.1 (A:2-383) O-acetylserine sulfhydrylase (Cysteine synthase) {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=86.50  E-value=1.7  Score=37.35  Aligned_cols=55  Identities=20%  Similarity=0.226  Sum_probs=42.2

Q ss_pred             cCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEec--ChhHHHHHHHcCCCeEE
Q 017916          177 ANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDV--DDYRLSVAKELGADNIV  231 (364)
Q Consensus       177 ~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~--~~~~~~~~~~lg~~~~~  231 (364)
                      .+++++++|+-..+|..|++.+..|+.+|.+.++++..  +++|.+.++.+|++.+.
T Consensus       139 ~~~~~g~~VVeaSSGN~GiAlA~~aa~lGik~~Iv~P~~~~~~K~~~ira~GAeVi~  195 (382)
T d1wkva1         139 RRVEKGSLVADATSSNFGVALSAVARLYGYRARVYLPGAAEEFGKLLPRLLGAQVIV  195 (382)
T ss_dssp             TTSCTTCEEEEECCHHHHHHHHHHHHHTTCEEEEEEETTSCHHHHHHHHHTTCEEEE
T ss_pred             hccCCCCEEEEeCCcHHHHHHHHHHHHcCCCEEEEeeccccccccccccccCcceee
Confidence            35678877555566999999999999999976666643  56788889999987543

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=86.48  E-value=0.35  Score=38.57  Aligned_cols=35  Identities=26%  Similarity=0.461  Sum_probs=29.0

Q ss_pred             CEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecChhH
Q 017916          183 TNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYR  218 (364)
Q Consensus       183 ~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~~~  218 (364)
                      .++||+|+ +++|.+.++.+...|+ .|+.++.++++
T Consensus         2 K~alITGas~GIG~aiA~~la~~Ga-~V~i~~~~~~~   37 (241)
T d1uaya_           2 RSALVTGGASGLGRAAALALKARGY-RVVVLDLRREG   37 (241)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHTC-EEEEEESSCCS
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCccc
Confidence            57799998 9999999999999999 57777766543

>d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase, N-terminal domain {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Klebsiella pneumoniae [TaxId: 573]

Probab=86.47  E-value=0.41  Score=40.19  Aligned_cols=34  Identities=32%  Similarity=0.426  Sum_probs=29.5

Q ss_pred             CCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecCh
Q 017916          182 ETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDD  216 (364)
Q Consensus       182 g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~  216 (364)
                      ..+|+|.|||..|+.++..+...|. .|.+++.++
T Consensus         2 ~KKI~IIGaG~sGL~aA~~L~k~G~-~V~viEk~~   35 (314)
T d2bi7a1           2 SKKILIVGAGFSGAVIGRQLAEKGH-QVHIIDQRD   35 (314)
T ss_dssp             CCEEEEECCSHHHHHHHHHHHTTTC-EEEEEESSS
T ss_pred             CCEEEEECCcHHHHHHHHHHHhCCC-CEEEEECCC
Confidence            4689999999999999999998898 688887655

>d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=86.42  E-value=0.73  Score=32.53  Aligned_cols=37  Identities=32%  Similarity=0.618  Sum_probs=30.6

Q ss_pred             CCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecCh
Q 017916          179 IGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDD  216 (364)
Q Consensus       179 ~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~  216 (364)
                      ++++.+|+|.|+|.+|.=++..++.+|. .|..++.++
T Consensus        27 ~~~~~~vvIIGgG~iG~E~A~~l~~~g~-~Vtli~~~~   63 (121)
T d1d7ya2          27 LRPQSRLLIVGGGVIGLELAATARTAGV-HVSLVETQP   63 (121)
T ss_dssp             CCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSS
T ss_pred             hhcCCeEEEECcchhHHHHHHHhhcccc-eEEEEeecc
Confidence            3567899999999999999999999998 566666554

>d1k0ia1 c.3.1.2 (A:1-173,A:276-394) p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: p-Hydroxybenzoate hydroxylase, PHBH
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=86.17  E-value=0.28  Score=40.40  Aligned_cols=32  Identities=34%  Similarity=0.445  Sum_probs=28.0

Q ss_pred             EEEEEcCCHHHHHHHHHHHHCCCCEEEEEecCh
Q 017916          184 NVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDD  216 (364)
Q Consensus       184 ~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~  216 (364)
                      .|+|.|+|.+|++++..++..|. .|.+++..+
T Consensus         4 ~V~IvGaGp~Gl~~A~~L~~~G~-~v~vlE~~~   35 (292)
T d1k0ia1           4 QVAIIGAGPSGLLLGQLLHKAGI-DNVILERQT   35 (292)
T ss_dssp             SEEEECCSHHHHHHHHHHHHHTC-CEEEECSSC
T ss_pred             CEEEECcCHHHHHHHHHHHHCCC-CEEEEeCCC
Confidence            58999999999999999999999 578887654

>d2dw4a2 c.3.1.2 (A:274-654,A:764-831) Lysine-specific histone demethylase 1, LSD1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Lysine-specific histone demethylase 1, LSD1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.15  E-value=0.46  Score=39.66  Aligned_cols=36  Identities=25%  Similarity=0.534  Sum_probs=30.1

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecCh
Q 017916          180 GPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDD  216 (364)
Q Consensus       180 ~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~  216 (364)
                      ++..+|+|.|+|..|++|+..++..|. .|.+.+.++
T Consensus         3 ~~~~kViVIGaG~aGL~aA~~L~~~G~-~V~VlEa~~   38 (449)
T d2dw4a2           3 KKTGKVIIIGSGVSGLAAARQLQSFGM-DVTLLEARD   38 (449)
T ss_dssp             SCCCEEEEECCBHHHHHHHHHHHHTTC-EEEEECSSS
T ss_pred             CCCCcEEEECCCHHHHHHHHHHHhCCC-CEEEEeCCC
Confidence            345679999999999999999999999 678887543

>d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Azotobacter vinelandii [TaxId: 354]

Probab=85.91  E-value=0.74  Score=32.35  Aligned_cols=34  Identities=24%  Similarity=0.298  Sum_probs=28.1

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecC
Q 017916          181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVD  215 (364)
Q Consensus       181 ~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~  215 (364)
                      ..++++|.|+|.+|+=.++.++.+|.+ |..+...
T Consensus        21 ~p~~i~IiG~G~ig~E~A~~l~~~G~~-Vtiv~~~   54 (119)
T d3lada2          21 VPGKLGVIGAGVIGLELGSVWARLGAE-VTVLEAM   54 (119)
T ss_dssp             CCSEEEEECCSHHHHHHHHHHHHTTCE-EEEEESS
T ss_pred             CCCeEEEECCChHHHHHHHHHHHcCCc-eEEEEee
Confidence            448899999999999999999999995 5555443

>d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=85.91  E-value=0.65  Score=32.48  Aligned_cols=34  Identities=26%  Similarity=0.350  Sum_probs=28.7

Q ss_pred             CCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecCh
Q 017916          182 ETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDD  216 (364)
Q Consensus       182 g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~  216 (364)
                      .++|+|.|+|.+|+-+++.++.+|. .|..+...+
T Consensus        21 p~~vvIiGgG~ig~E~A~~l~~~G~-~Vtlve~~~   54 (116)
T d1gesa2          21 PERVAVVGAGYIGVELGGVINGLGA-KTHLFEMFD   54 (116)
T ss_dssp             CSEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSS
T ss_pred             CCEEEEECCChhhHHHHHHhhcccc-EEEEEeecc
Confidence            4789999999999999999999999 566666554

>d1p5ja_ c.79.1.1 (A:) L-serine dehydratase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: L-serine dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.79  E-value=3.1  Score=34.39  Aligned_cols=47  Identities=23%  Similarity=0.371  Sum_probs=35.8

Q ss_pred             EEEEEc-CCHHHHHHHHHHHHCCCCEEEEEec--ChhHHHHHHHcCCCeE
Q 017916          184 NVLIMG-AGPIGLVTMLGARAFGAPRIVIVDV--DDYRLSVAKELGADNI  230 (364)
Q Consensus       184 ~VLI~G-ag~~G~~ai~la~~~g~~~vv~~~~--~~~~~~~~~~lg~~~~  230 (364)
                      .-+|.. +|..|.+++..|+.+|.+.++++..  +.+|.+.++.+|+..+
T Consensus        55 ~~vv~aSsGN~g~a~A~~a~~~G~~~~i~~p~~~~~~k~~~~~~~Ga~v~  104 (319)
T d1p5ja_          55 AHFVCSSAGNAGMAAAYAARQLGVPATIVVPGTTPALTIERLKNEGATCK  104 (319)
T ss_dssp             CEEEECCSSHHHHHHHHHHHHHTCCEEEEECTTCCHHHHHHHHHTTCEEE
T ss_pred             CEEEEeCCCcHHHHHHHHhhhccccceeccccccccccccccccceeccc
Confidence            345555 5999999999999999987777643  4477888888888643

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=85.76  E-value=0.89  Score=38.01  Aligned_cols=31  Identities=19%  Similarity=-0.020  Sum_probs=26.8

Q ss_pred             CEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEec
Q 017916          183 TNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDV  214 (364)
Q Consensus       183 ~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~  214 (364)
                      .++||+|| |-+|...+..+...|+ .|+++++
T Consensus         2 k~~LVTGatGfiG~~lv~~Ll~~g~-~V~~~~r   33 (339)
T d1n7ha_           2 KIALITGITGQDGSYLTEFLLGKGY-EVHGLIR   33 (339)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEEC
T ss_pred             CEEEEeCCccHHHHHHHHHHHHCcC-EEEEEEC
Confidence            47899998 9999999999999999 5777765

>d1vlma_ c.66.1.41 (A:) Possible histamine N-methyltransferase TM1293 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Possible histamine N-methyltransferase TM1293
species: Thermotoga maritima [TaxId: 2336]

Probab=85.61  E-value=1.2  Score=34.30  Aligned_cols=90  Identities=14%  Similarity=0.198  Sum_probs=58.6

Q ss_pred             CCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcCCCccEE
Q 017916          179 IGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVS  258 (364)
Q Consensus       179 ~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~v  258 (364)
                      +.++++||=.|+|. |..+..++      .+++++.+++..+.+++.+.... .-+.  .++.        ...+.+|+|
T Consensus        34 ~~~~~~vLDiGcG~-G~~~~~~~------~~~giD~s~~~~~~a~~~~~~~~-~~d~--~~l~--------~~~~~fD~I   95 (208)
T d1vlma_          34 LLPEGRGVEIGVGT-GRFAVPLK------IKIGVEPSERMAEIARKRGVFVL-KGTA--ENLP--------LKDESFDFA   95 (208)
T ss_dssp             HCCSSCEEEETCTT-STTHHHHT------CCEEEESCHHHHHHHHHTTCEEE-ECBT--TBCC--------SCTTCEEEE
T ss_pred             hCCCCeEEEECCCC-cccccccc------eEEEEeCChhhcccccccccccc-cccc--cccc--------ccccccccc
Confidence            35677899998743 44444442      35889999999999988765432 2111  1110        013579999


Q ss_pred             EECC-----CC-HHHHHHHHHhcccCCEEEEEcC
Q 017916          259 FDCA-----GF-NKTMSTALSATRAGGKVCLVGM  286 (364)
Q Consensus       259 id~~-----g~-~~~~~~~~~~l~~~G~~v~~g~  286 (364)
                      +...     .. ...++++.+.|+|+|+++....
T Consensus        96 ~~~~~l~h~~d~~~~l~~~~~~L~pgG~l~i~~~  129 (208)
T d1vlma_          96 LMVTTICFVDDPERALKEAYRILKKGGYLIVGIV  129 (208)
T ss_dssp             EEESCGGGSSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             ccccccccccccccchhhhhhcCCCCceEEEEec
Confidence            8642     22 3567889999999999987753

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

Probab=85.58  E-value=1.9  Score=36.18  Aligned_cols=35  Identities=20%  Similarity=0.149  Sum_probs=27.9

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecCh
Q 017916          181 PETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDD  216 (364)
Q Consensus       181 ~g~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~  216 (364)
                      +-.+|||+|+ |.+|...+..+...|.++ .++.++.
T Consensus         2 ~kktIlVtGatG~iG~~lv~~Ll~~G~~V-~~l~R~~   37 (350)
T d1xgka_           2 QKKTIAVVGATGRQGASLIRVAAAVGHHV-RAQVHSL   37 (350)
T ss_dssp             CCCCEEEESTTSHHHHHHHHHHHHTTCCE-EEEESCS
T ss_pred             CCCEEEEECCChHHHHHHHHHHHhCCCeE-EEEECCc
Confidence            4578999998 999999999999999964 4454543

>d1jqea_ c.66.1.19 (A:) Histamine methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Histamine methyltransferase
domain: Histamine methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.47  E-value=0.71  Score=37.75  Aligned_cols=105  Identities=16%  Similarity=0.137  Sum_probs=57.8

Q ss_pred             CCCCCCEEEEEcCCHHHHHHHHHHHH----C-CCC-EEEEEecChhHHHHHHHc-C----CCe-EEecCCCcccHHHHHH
Q 017916          178 NIGPETNVLIMGAGPIGLVTMLGARA----F-GAP-RIVIVDVDDYRLSVAKEL-G----ADN-IVKVSTNLQDIAEEVE  245 (364)
Q Consensus       178 ~~~~g~~VLI~Gag~~G~~ai~la~~----~-g~~-~vv~~~~~~~~~~~~~~l-g----~~~-~~~~~~~~~~~~~~i~  245 (364)
                      ..+++-+||=.|+|. |..+..+++.    . +.. .+++++.++...+.+++. .    ... .+++..  ..+.+...
T Consensus        37 ~~~~~~~VLDiGcG~-G~~~~~ll~~l~~~~~~~~~~~~~vD~s~~~l~~a~~~~~~~~~~~~~~~~~~~--~~~~~~~~  113 (280)
T d1jqea_          37 DTKSEIKILSIGGGA-GEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAKISNLENVKFAWHK--ETSSEYQS  113 (280)
T ss_dssp             TTCSEEEEEEETCTT-SHHHHHHHHHHHHHSTTCEEEEEEECCCHHHHHHHHHHHTTCCSCTTEEEEEEC--SCHHHHHH
T ss_pred             cCCCCCeEEEEcCCC-CHHHHHHHHHhhhhccCCceEEEEEeCcHHHHHHHHHHHhhccccccccccchh--hhhhhhcc
Confidence            345555789888643 4444444432    2 221 467888888877776652 1    111 111111  12222111


Q ss_pred             HHH-HHcCCCccEEEECCC-----C-HHHHHHHHHhcccCCEEEEEc
Q 017916          246 KIQ-KAMGTGIDVSFDCAG-----F-NKTMSTALSATRAGGKVCLVG  285 (364)
Q Consensus       246 ~~~-~~~~~~~d~vid~~g-----~-~~~~~~~~~~l~~~G~~v~~g  285 (364)
                      ... ......+|+|+....     . ...+..+.++|+|+|.++...
T Consensus       114 ~~~~~~~~~~fD~I~~~~~l~~~~d~~~~l~~l~~~LkpgG~l~i~~  160 (280)
T d1jqea_         114 RMLEKKELQKWDFIHMIQMLYYVKDIPATLKFFHSLLGTNAKMLIIV  160 (280)
T ss_dssp             HHTTSSSCCCEEEEEEESCGGGCSCHHHHHHHHHHTEEEEEEEEEEE
T ss_pred             hhcccCCCCceeEEEEccceecCCCHHHHHHHHHhhCCCCCEEEEEE
Confidence            111 112467999986322     2 468889999999999987764

>d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Trypanosome (Leishmania mexicana) [TaxId: 5665]

Probab=85.42  E-value=1.4  Score=33.69  Aligned_cols=82  Identities=9%  Similarity=0.186  Sum_probs=51.2

Q ss_pred             EEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcC--CCeE--EecCC---CcccHHHHHHHHHHHcCCCcc
Q 017916          184 NVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELG--ADNI--VKVST---NLQDIAEEVEKIQKAMGTGID  256 (364)
Q Consensus       184 ~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg--~~~~--~~~~~---~~~~~~~~i~~~~~~~~~~~d  256 (364)
                      +|.|.|+|..|.+.+.++...|. .|....++++..+.+.+-+  ....  +....   ...++.+.+        .+.|
T Consensus         9 KI~ViGaG~wGtAlA~~La~~g~-~V~l~~r~~~~~~~i~~~~~n~~yl~~~~l~~~i~~t~~l~~a~--------~~ad   79 (189)
T d1n1ea2           9 KAVVFGSGAFGTALAMVLSKKCR-EVCVWHMNEEEVRLVNEKRENVLFLKGVQLASNITFTSDVEKAY--------NGAE   79 (189)
T ss_dssp             EEEEECCSHHHHHHHHHHHTTEE-EEEEECSCHHHHHHHHHHTBCTTTSTTCBCCTTEEEESCHHHHH--------TTCS
T ss_pred             eEEEECCCHHHHHHHHHHHHcCC-eEEEEEecHHHHHHHhhcccccccccccccccccccchhhhhcc--------CCCC
Confidence            69999999999999988888777 5777778887777665422  1100  00000   112322222        4679


Q ss_pred             EEEECCCCHHHHHHHHHhc
Q 017916          257 VSFDCAGFNKTMSTALSAT  275 (364)
Q Consensus       257 ~vid~~g~~~~~~~~~~~l  275 (364)
                      ++|-++.+ ..+...++.+
T Consensus        80 ~iiiavPs-~~~~~~~~~~   97 (189)
T d1n1ea2          80 IILFVIPT-QFLRGFFEKS   97 (189)
T ss_dssp             CEEECSCH-HHHHHHHHHH
T ss_pred             EEEEcCcH-HHHHHHHHHH
Confidence            99999984 4555555544

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=84.99  E-value=0.28  Score=41.15  Aligned_cols=31  Identities=26%  Similarity=0.320  Sum_probs=25.9

Q ss_pred             CEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEec
Q 017916          183 TNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDV  214 (364)
Q Consensus       183 ~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~  214 (364)
                      .+|||+|+ |-+|...+..+...|. .|++++.
T Consensus         2 KKIlVtG~sGfiG~~lv~~L~~~g~-~V~~~d~   33 (312)
T d2b69a1           2 KRILITGGAGFVGSHLTDKLMMDGH-EVTVVDN   33 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEEC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCcC-EEEEEeC
Confidence            57999998 9999999998888899 5666653

>d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-2-hydroxyisocaproate dehydrogenase
species: Lactobacillus casei [TaxId: 1582]

Probab=84.94  E-value=0.5  Score=36.79  Aligned_cols=87  Identities=18%  Similarity=0.195  Sum_probs=54.4

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcCCCccEEEE
Q 017916          181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  260 (364)
Q Consensus       181 ~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid  260 (364)
                      .|.+|.|.|.|.+|+.++++++.+|+ .|++.+....+.       ......+    .++.    ++.    ...|++.-
T Consensus        44 ~~ktvgIiG~G~IG~~va~~l~~fg~-~v~~~d~~~~~~-------~~~~~~~----~~l~----~l~----~~~D~v~~  103 (199)
T d1dxya1          44 GQQTVGVMGTGHIGQVAIKLFKGFGA-KVIAYDPYPMKG-------DHPDFDY----VSLE----DLF----KQSDVIDL  103 (199)
T ss_dssp             GGSEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSCCSS-------CCTTCEE----CCHH----HHH----HHCSEEEE
T ss_pred             cceeeeeeecccccccccccccccce-eeeccCCccchh-------hhcchhH----HHHH----HHH----Hhccccee
Confidence            46899999999999999999999999 678887643321       0000111    1222    222    13577765


Q ss_pred             CCC-CHHH----HHHHHHhcccCCEEEEEcCC
Q 017916          261 CAG-FNKT----MSTALSATRAGGKVCLVGMG  287 (364)
Q Consensus       261 ~~g-~~~~----~~~~~~~l~~~G~~v~~g~~  287 (364)
                      ++. ++++    -...++.|+++..++..+.+
T Consensus       104 ~~plt~~T~~li~~~~l~~mk~~a~lIN~aRG  135 (199)
T d1dxya1         104 HVPGIEQNTHIINEAAFNLMKPGAIVINTARP  135 (199)
T ss_dssp             CCCCCGGGTTSBCHHHHHHSCTTEEEEECSCT
T ss_pred             eecccccccccccHHHhhccCCceEEEecccH
Confidence            543 2221    13567888888888877643

>d1yzha1 c.66.1.53 (A:8-211) tRNA (guanine-N(7)-)-methyltransferase TrmB {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: TrmB-like
domain: tRNA (guanine-N(7)-)-methyltransferase TrmB
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=84.88  E-value=2.5  Score=32.68  Aligned_cols=94  Identities=18%  Similarity=0.130  Sum_probs=61.7

Q ss_pred             EEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHH----HHcCCCeEEecCCCcccHHHHHHHHHHHcCCCccEEE
Q 017916          184 NVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA----KELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF  259 (364)
Q Consensus       184 ~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~----~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vi  259 (364)
                      .||=.|.|. |..++.+|+...-..+++++.+......+    ++.+..++..+...-.++.+..      ....+|.++
T Consensus        34 lvLdIGcG~-G~~~~~lA~~~p~~~~iGid~~~~~v~~a~~~~~~~~l~Ni~~~~~da~~l~~~~------~~~~~~~i~  106 (204)
T d1yzha1          34 IHVEVGSGK-GAFVSGMAKQNPDINYIGIDIQKSVLSYALDKVLEVGVPNIKLLWVDGSDLTDYF------EDGEIDRLY  106 (204)
T ss_dssp             EEEEESCTT-SHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCSSEEEEECCSSCGGGTS------CTTCCSEEE
T ss_pred             eEEEEeccC-CHHHHHHHHHCCCCceEEEeccHHHHHHHHHhhhhhccccceeeecCHHHHhhhc------cCCceehhc
Confidence            455568766 88999999998666899999988765543    4567765433322222332111      134577775


Q ss_pred             ECCCC--------------HHHHHHHHHhcccCCEEEEE
Q 017916          260 DCAGF--------------NKTMSTALSATRAGGKVCLV  284 (364)
Q Consensus       260 d~~g~--------------~~~~~~~~~~l~~~G~~v~~  284 (364)
                      -..-.              ++.++.+.+.|+|||.+...
T Consensus       107 i~fPdPw~K~~h~krRl~~~~~l~~~~~~LkpgG~l~i~  145 (204)
T d1yzha1         107 LNFSDPWPKKRHEKRRLTYKTFLDTFKRILPENGEIHFK  145 (204)
T ss_dssp             EESCCCCCSGGGGGGSTTSHHHHHHHHHHSCTTCEEEEE
T ss_pred             ccccccccchhhhhhhhhHHHHHHHHHHhCCCCcEEEEE
Confidence            44332              47788999999999998764

>d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=84.78  E-value=0.85  Score=32.17  Aligned_cols=34  Identities=24%  Similarity=0.425  Sum_probs=28.3

Q ss_pred             CCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecCh
Q 017916          182 ETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDD  216 (364)
Q Consensus       182 g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~  216 (364)
                      ..+++|.|+|.+|+=+++.+..+|. .|..+...+
T Consensus        23 p~~~vIiG~G~ig~E~A~~l~~lG~-~Vtii~~~~   56 (122)
T d1v59a2          23 PKRLTIIGGGIIGLEMGSVYSRLGS-KVTVVEFQP   56 (122)
T ss_dssp             CSEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSS
T ss_pred             CCeEEEECCCchHHHHHHHHHhhCc-ceeEEEecc
Confidence            4799999999999999999999999 466665443

>d2esra1 c.66.1.46 (A:28-179) Putative methyltransferase SPy1538 {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Putative methyltransferase SPy1538
species: Streptococcus pyogenes [TaxId: 1314]

Probab=84.72  E-value=3.2  Score=30.21  Aligned_cols=92  Identities=15%  Similarity=0.176  Sum_probs=52.5

Q ss_pred             CCCEEEEEcC--CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHH----HcCCCe-EEecCCCcccHHHHHHHHHHHcCC
Q 017916          181 PETNVLIMGA--GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAK----ELGADN-IVKVSTNLQDIAEEVEKIQKAMGT  253 (364)
Q Consensus       181 ~g~~VLI~Ga--g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~----~lg~~~-~~~~~~~~~~~~~~i~~~~~~~~~  253 (364)
                      .|.+||=.++  |.+|..|    ..+|++.|+.++.+++..+.++    .++... +..+.   .|..+.+    +....
T Consensus        14 ~g~~vlDl~~GtG~~~iea----~~rga~~v~~ve~~~~a~~~~~~n~~~~~~~~~~~ii~---~D~~~~l----~~~~~   82 (152)
T d2esra1          14 NGGRVLDLFAGSGGLAIEA----VSRGMSAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLK---MEAERAI----DCLTG   82 (152)
T ss_dssp             CSCEEEEETCTTCHHHHHH----HHTTCCEEEEECCCHHHHHHHHHHHHTTTCGGGEEEEC---SCHHHHH----HHBCS
T ss_pred             CCCeEEEcCCccCHHHHHH----HHhCcceeeeehhchhhhhhhhhhhhhcccccchhhhc---ccccccc----ccccc
Confidence            5788888754  6666533    3479889999999887766554    356543 22222   2333333    23357


Q ss_pred             CccEEE-ECCCCHHHHHHHHH------hcccCCEEEE
Q 017916          254 GIDVSF-DCAGFNKTMSTALS------ATRAGGKVCL  283 (364)
Q Consensus       254 ~~d~vi-d~~g~~~~~~~~~~------~l~~~G~~v~  283 (364)
                      .+|+|| |.--........+.      .|+++|.++.
T Consensus        83 ~fDiIf~DPPy~~~~~~~~l~~i~~~~~L~~~g~iii  119 (152)
T d2esra1          83 RFDLVFLDPPYAKETIVATIEALAAKNLLSEQVMVVC  119 (152)
T ss_dssp             CEEEEEECCSSHHHHHHHHHHHHHHTTCEEEEEEEEE
T ss_pred             ccceeEechhhccchHHHHHHHHHHCCCcCCCeEEEE
Confidence            899987 43212233333333      3566676654

>d2nvwa1 c.2.1.3 (A:2-154,A:374-457) Galactose/lactose metabolism regulatory protein GAL80 {Yeast (Kluyveromyces lactis) [TaxId: 28985]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Galactose/lactose metabolism regulatory protein GAL80
species: Yeast (Kluyveromyces lactis) [TaxId: 28985]

Probab=84.68  E-value=3.1  Score=32.85  Aligned_cols=93  Identities=8%  Similarity=0.050  Sum_probs=57.2

Q ss_pred             CEEEEEcCCH----HHHHHHHHHHHC--CCCEEEEEecChhHH-HHHHHcCCCeEEecCCCcccHHHHHHHHHHHcCCCc
Q 017916          183 TNVLIMGAGP----IGLVTMLGARAF--GAPRIVIVDVDDYRL-SVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGI  255 (364)
Q Consensus       183 ~~VLI~Gag~----~G~~ai~la~~~--g~~~vv~~~~~~~~~-~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~  255 (364)
                      =+|.|.|.|.    .+...+...+..  +++.+.+.+.+.++. ++.++++......|+    ++.    ++..  ...+
T Consensus        17 irvgiIG~G~~~~~~~~~h~~ai~~~~~~~~ivav~d~~~~~~~~~~~~~~~~~~~~~~----~~~----~l~~--~~~i   86 (237)
T d2nvwa1          17 IRVGFVGLTSGKSWVAKTHFLAIQQLSSQFQIVALYNPTLKSSLQTIEQLQLKHATGFD----SLE----SFAQ--YKDI   86 (237)
T ss_dssp             EEEEEECCCSTTSHHHHTHHHHHHHTTTTEEEEEEECSCHHHHHHHHHHTTCTTCEEES----CHH----HHHH--CTTC
T ss_pred             eEEEEEecCccccHHHHHHHHHHHhcCCCeEEEEEEcCCHHHHHHHHHhcccccceeec----chh----hccc--cccc
Confidence            4788888754    334334334443  464455566666654 456778765443343    222    2322  4679


Q ss_pred             cEEEECCCCHHHHHHHHHhcccC-----CEEEEEc
Q 017916          256 DVSFDCAGFNKTMSTALSATRAG-----GKVCLVG  285 (364)
Q Consensus       256 d~vid~~g~~~~~~~~~~~l~~~-----G~~v~~g  285 (364)
                      |+|+.|+....+.+....+|..|     ++-+++.
T Consensus        87 D~V~i~tp~~~h~~~~~~al~aG~~~~~~k~V~~E  121 (237)
T d2nvwa1          87 DMIVVSVKVPEHYEVVKNILEHSSQNLNLRYLYVE  121 (237)
T ss_dssp             SEEEECSCHHHHHHHHHHHHHHSSSCSSCCEEEEE
T ss_pred             ceeeccCCCcchhhHHHHHHHhcccccCCceEEEe
Confidence            99999998777878888888755     4567775

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=84.67  E-value=0.93  Score=34.29  Aligned_cols=38  Identities=21%  Similarity=0.351  Sum_probs=30.4

Q ss_pred             EEEEEc-CCHHHHHHHHHHHHCCCCEEEEEecChhHHHHH
Q 017916          184 NVLIMG-AGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA  222 (364)
Q Consensus       184 ~VLI~G-ag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~  222 (364)
                      +|.|.| +|.+|.+.++.+...|+ .|+...+++++.+.+
T Consensus         2 ki~vigGaG~iG~alA~~la~~G~-~V~l~~R~~e~~~~l   40 (212)
T d1jaya_           2 RVALLGGTGNLGKGLALRLATLGH-EIVVGSRREEKAEAK   40 (212)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTC-EEEEEESSHHHHHHH
T ss_pred             EEEEEeCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHH
Confidence            688885 59999999999999999 566667887775443

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

Probab=84.56  E-value=1.4  Score=35.67  Aligned_cols=32  Identities=25%  Similarity=0.487  Sum_probs=26.6

Q ss_pred             CEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecC
Q 017916          183 TNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVD  215 (364)
Q Consensus       183 ~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~  215 (364)
                      .+|||+|| |-+|...+..+...|.+ |++++++
T Consensus         4 kKILVtGatG~iG~~l~~~L~~~G~~-V~~l~R~   36 (307)
T d1qyca_           4 SRILLIGATGYIGRHVAKASLDLGHP-TFLLVRE   36 (307)
T ss_dssp             CCEEEESTTSTTHHHHHHHHHHTTCC-EEEECCC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCe-EEEEECC
Confidence            58999998 99999999999889995 5666553

>d1dssg1 c.2.1.3 (G:1-148,G:313-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {South China Sea lobster (Palinurus versicolor) [TaxId: 150436]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: South China Sea lobster (Palinurus versicolor) [TaxId: 150436]

Probab=84.44  E-value=3.2  Score=30.97  Aligned_cols=99  Identities=17%  Similarity=0.215  Sum_probs=60.2

Q ss_pred             EEEEEcCCHHHHHHHHHHHHCCCCEEEEEec--ChhHHHHHHHcCCCe------------EEecCC------CcccHHHH
Q 017916          184 NVLIMGAGPIGLVTMLGARAFGAPRIVIVDV--DDYRLSVAKELGADN------------IVKVST------NLQDIAEE  243 (364)
Q Consensus       184 ~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~--~~~~~~~~~~lg~~~------------~~~~~~------~~~~~~~~  243 (364)
                      +|.|.|-|-+|..+.+.+...+.+.+..-+.  +.+...++-++...+            .+.++.      ...+..+ 
T Consensus         2 kIgINGfGRIGR~~~R~~~~~~~~ivaINd~~~~~~~~~yLlkyDS~hG~~~~~i~~~~~~l~ing~~I~~~~~~~p~~-   80 (169)
T d1dssg1           2 KIGINGFGRIGRLVLRAALEMGAQVVAVNDPFIALEYMVYMFKYDSTHGMFKGEVKAEDGALVVDGKKITVFNEMKPEN-   80 (169)
T ss_dssp             CEEEECCSHHHHHHHHHHHHHTCCEEEEECTTSCHHHHHHHHHCCTTTCCCSSCEEEETTEEEETTEEEEEECCSSGGG-
T ss_pred             eEEEECCcHHHHHHHHHHHhCCCcEEEECCCCcCHHHHHHHHhcccccCCcCCeEEEeCCEEEECCEEEEEEecCChHH-
Confidence            6889999999999999988778865554443  234555544432211            011110      0011111 


Q ss_pred             HHHHHHHcCCCccEEEECCCCHHHHHHHHHhcccCCEEEEEcCC
Q 017916          244 VEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMG  287 (364)
Q Consensus       244 i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~  287 (364)
                      + .|.   ..++|+||||+|--.....+..+|..+.+-+.+..+
T Consensus        81 i-~W~---~~gvD~ViEcTG~f~~~~~~~~hl~~gakkViisaP  120 (169)
T d1dssg1          81 I-PWS---KAGAEYIVESTGVFTTIEKASAHFKGGAKKVIISAP  120 (169)
T ss_dssp             C-CHH---HHTCCEEEECSSSCCSHHHHGGGGTTTCSEEEESSC
T ss_pred             C-Ccc---ccCCCEEEecCceEcCHHHHHHHHhcCCceEeecCC
Confidence            0 132   237999999999766667788889888777776643

>d1f06a1 c.2.1.3 (A:1-118,A:269-320) Diaminopimelic acid dehydrogenase (DAPDH) {Corynebacterium glutamicum [TaxId: 1718]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Diaminopimelic acid dehydrogenase (DAPDH)
species: Corynebacterium glutamicum [TaxId: 1718]

Probab=84.44  E-value=1.8  Score=32.28  Aligned_cols=83  Identities=16%  Similarity=0.119  Sum_probs=53.9

Q ss_pred             EEEEEcCCHHHHHHHHHHHHC-CCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcCCCccEEEECC
Q 017916          184 NVLIMGAGPIGLVTMLGARAF-GAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCA  262 (364)
Q Consensus       184 ~VLI~Gag~~G~~ai~la~~~-g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid~~  262 (364)
                      +|.|+|.|.+|...+...+.. +++.+.+.+.++++.      .......+.+    .    ..    ....+|+|+.|+
T Consensus         5 rvgiiG~G~ig~~~~~~l~~~~~~elvav~~~~~~~~------~~~~~~~~~~----~----~~----~~~~~D~Vvi~t   66 (170)
T d1f06a1           5 RVAIVGYGNLGRSVEKLIAKQPDMDLVGIFSRRATLD------TKTPVFDVAD----V----DK----HADDVDVLFLCM   66 (170)
T ss_dssp             EEEEECCSHHHHHHHHHHTTCSSEEEEEEEESSSCCS------SSSCEEEGGG----G----GG----TTTTCSEEEECS
T ss_pred             eEEEECChHHHHHHHHHHHhCCCcEEEEEEecccccc------cccccccchh----h----hh----hccccceEEEeC
Confidence            688999999998877777654 564444455444321      1122222211    1    11    134799999999


Q ss_pred             CCHHHHHHHHHhcccCCEEEEE
Q 017916          263 GFNKTMSTALSATRAGGKVCLV  284 (364)
Q Consensus       263 g~~~~~~~~~~~l~~~G~~v~~  284 (364)
                      ....+.+.+.++|+.|-.++..
T Consensus        67 p~~~h~~~a~~aL~aG~~vv~~   88 (170)
T d1f06a1          67 GSATDIPEQAPKFAQFACTVDT   88 (170)
T ss_dssp             CTTTHHHHHHHHHTTTSEEECC
T ss_pred             CCcccHHHHHHHHHCCCcEEEe
Confidence            9878888999999988877654

>d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Rhodotorula gracilis [TaxId: 5286]

Probab=84.41  E-value=0.78  Score=36.45  Aligned_cols=34  Identities=26%  Similarity=0.410  Sum_probs=28.8

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEec
Q 017916          180 GPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDV  214 (364)
Q Consensus       180 ~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~  214 (364)
                      +.-.+|+|.|+|..|++++..+...|. .|.+++.
T Consensus         4 ~~~~kVvVIGaGiaGl~~A~~L~~~G~-~V~vier   37 (268)
T d1c0pa1           4 HSQKRVVVLGSGVIGLSSALILARKGY-SVHILAR   37 (268)
T ss_dssp             CCSCEEEEECCSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred             CCCCcEEEECccHHHHHHHHHHHHCCC-CEEEEeC
Confidence            344689999999999999999999999 5777765

>d1ws6a1 c.66.1.46 (A:15-185) Methyltransferase TTHA0928 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Methyltransferase TTHA0928
species: Thermus thermophilus [TaxId: 274]

Probab=84.37  E-value=6.3  Score=29.18  Aligned_cols=95  Identities=24%  Similarity=0.262  Sum_probs=53.9

Q ss_pred             CCCCCCEEEEEcC--CHHHHHHHHHHHHCCCCEEEEEecChhHHHHHH----HcCCCe-EEecCCCcccHHHHHHHHHHH
Q 017916          178 NIGPETNVLIMGA--GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAK----ELGADN-IVKVSTNLQDIAEEVEKIQKA  250 (364)
Q Consensus       178 ~~~~g~~VLI~Ga--g~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~----~lg~~~-~~~~~~~~~~~~~~i~~~~~~  250 (364)
                      .+.+|.+||=.++  |.+|.   . |...|+ .++.++.+++..+.++    .++... +...+   .+  ..+. ....
T Consensus        38 ~~~~g~~vLDl~~G~G~~~i---~-a~~~ga-~vv~vD~~~~a~~~~~~N~~~~~~~~~v~~~~---~d--~~~~-~~~~  106 (171)
T d1ws6a1          38 RYPRRGRFLDPFAGSGAVGL---E-AASEGW-EAVLVEKDPEAVRLLKENVRRTGLGARVVALP---VE--VFLP-EAKA  106 (171)
T ss_dssp             HCTTCCEEEEETCSSCHHHH---H-HHHTTC-EEEEECCCHHHHHHHHHHHHHHTCCCEEECSC---HH--HHHH-HHHH
T ss_pred             cccCCCeEEEeccccchhhh---h-hhhccc-hhhhcccCHHHHhhhhHHHHhhccccceeeee---hh--cccc-cccc
Confidence            4577889988754  55554   3 334688 5678999998877654    456543 33211   11  1111 1122


Q ss_pred             cCCCccEEE-EC---CCCHHHHHHHHH--hcccCCEEEE
Q 017916          251 MGTGIDVSF-DC---AGFNKTMSTALS--ATRAGGKVCL  283 (364)
Q Consensus       251 ~~~~~d~vi-d~---~g~~~~~~~~~~--~l~~~G~~v~  283 (364)
                      .+..+|+|| |.   .+-.+.+..++.  .|+++|.++.
T Consensus       107 ~~~~fD~If~DPPY~~~~~~~l~~l~~~~ll~~~g~ivi  145 (171)
T d1ws6a1         107 QGERFTVAFMAPPYAMDLAALFGELLASGLVEAGGLYVL  145 (171)
T ss_dssp             TTCCEEEEEECCCTTSCTTHHHHHHHHHTCEEEEEEEEE
T ss_pred             cCCccceeEEccccccCHHHHHHHHHHcCCcCCCeEEEE
Confidence            356799997 42   232344444443  5788887764

>d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit
species: Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]

Probab=84.28  E-value=0.72  Score=34.41  Aligned_cols=36  Identities=11%  Similarity=0.281  Sum_probs=28.6

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHCCCC-EEEEEecCh
Q 017916          181 PETNVLIMGAGPIGLVTMLGARAFGAP-RIVIVDVDD  216 (364)
Q Consensus       181 ~g~~VLI~Gag~~G~~ai~la~~~g~~-~vv~~~~~~  216 (364)
                      .|.+|+|.|+|.+|+.+++.++.++.+ .|..++..+
T Consensus         1 ~gkrivIvGgG~~G~e~A~~l~~~~~~~~Vtlie~~~   37 (186)
T d1fcda1           1 AGRKVVVVGGGTGGATAAKYIKLADPSIEVTLIEPNT   37 (186)
T ss_dssp             CCCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSCS
T ss_pred             CCCcEEEECccHHHHHHHHHHHHcCCCCcEEEEECCC
Confidence            478999999999999999999888754 466665544

>d2i76a2 c.2.1.6 (A:2-154) Hypothetical protein TM1727 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM1727
species: Thermotoga maritima [TaxId: 2336]

Probab=84.14  E-value=0.36  Score=35.66  Aligned_cols=81  Identities=12%  Similarity=0.051  Sum_probs=47.0

Q ss_pred             EEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcCCCccEEEECCCCHH
Q 017916          187 IMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNK  266 (364)
Q Consensus       187 I~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid~~g~~~  266 (364)
                      +.|+|.+|.+.++.++. +.....+..++.++.+.+.+.+.....+.    .+           .-...|+||-|+. ++
T Consensus         4 fIG~G~mg~~l~~~L~~-~~~~~~v~~R~~~~~~~l~~~~~~~~~~~----~~-----------~~~~~DiVil~v~-d~   66 (153)
T d2i76a2           4 FVGTGTLTRFFLECLKD-RYEIGYILSRSIDRARNLAEVYGGKAATL----EK-----------HPELNGVVFVIVP-DR   66 (153)
T ss_dssp             EESCCHHHHHHHHTTC-----CCCEECSSHHHHHHHHHHTCCCCCSS----CC-----------CCC---CEEECSC-TT
T ss_pred             EEeCcHHHHHHHHHHHh-CCCEEEEEeCChhhhcchhhcccccccch----hh-----------hhccCcEEEEecc-ch
Confidence            56999999888776654 34344567788888776665544322221    11           0245799999998 45


Q ss_pred             HHHHHHHhcccCCEE-EEE
Q 017916          267 TMSTALSATRAGGKV-CLV  284 (364)
Q Consensus       267 ~~~~~~~~l~~~G~~-v~~  284 (364)
                      .+...+..|+..+.+ +.+
T Consensus        67 ~i~~v~~~l~~~~~ivi~~   85 (153)
T d2i76a2          67 YIKTVANHLNLGDAVLVHC   85 (153)
T ss_dssp             THHHHHTTTCCSSCCEEEC
T ss_pred             hhhHHHhhhcccceeeeec
Confidence            667777778654444 444

>d1h6da1 c.2.1.3 (A:51-212,A:375-433) Glucose-fructose oxidoreductase, N-terminal domain {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glucose-fructose oxidoreductase, N-terminal domain
species: Zymomonas mobilis [TaxId: 542]

Probab=84.07  E-value=1  Score=35.47  Aligned_cols=91  Identities=24%  Similarity=0.255  Sum_probs=57.7

Q ss_pred             EEEEEcCCHHHH-HHHHHHHH-CCCCEEEEEecChhHHH-HHHHcCCC--eEEecCCCcccHHHHHHHHHHHcCCCccEE
Q 017916          184 NVLIMGAGPIGL-VTMLGARA-FGAPRIVIVDVDDYRLS-VAKELGAD--NIVKVSTNLQDIAEEVEKIQKAMGTGIDVS  258 (364)
Q Consensus       184 ~VLI~Gag~~G~-~ai~la~~-~g~~~vv~~~~~~~~~~-~~~~lg~~--~~~~~~~~~~~~~~~i~~~~~~~~~~~d~v  258 (364)
                      +|.|.|.|..|. ..+...+. -+++.+.+++.+.++.+ +.++++..  .+..|++    +.+    +..  ...+|+|
T Consensus        35 riaiIG~G~~~~~~~~~~~~~~~~~~ivav~d~~~~~a~~~~~~~~i~~~~~~~~~d----~~e----ll~--~~~iD~V  104 (221)
T d1h6da1          35 GYAIVGLGKYALNQILPGFAGCQHSRIEALVSGNAEKAKIVAAEYGVDPRKIYDYSN----FDK----IAK--DPKIDAV  104 (221)
T ss_dssp             EEEEECCSHHHHHTHHHHTTTCSSEEEEEEECSCHHHHHHHHHHTTCCGGGEECSSS----GGG----GGG--CTTCCEE
T ss_pred             EEEEEcCcHHHHHHHHHHHHhCCCceEEEEecCCHHHHHHHHHhhccccccccccCc----hhh----hcc--cccceee
Confidence            678889998885 33333333 36755666777777654 55677754  2333322    111    211  3579999


Q ss_pred             EECCCCHHHHHHHHHhcccCCEEEEEc
Q 017916          259 FDCAGFNKTMSTALSATRAGGKVCLVG  285 (364)
Q Consensus       259 id~~g~~~~~~~~~~~l~~~G~~v~~g  285 (364)
                      +-|+....+...+.++|.. |.-+++.
T Consensus       105 ~I~tp~~~H~~~~~~al~~-gk~v~~E  130 (221)
T d1h6da1         105 YIILPNSLHAEFAIRAFKA-GKHVMCE  130 (221)
T ss_dssp             EECSCGGGHHHHHHHHHHT-TCEEEEC
T ss_pred             eeccchhhhhhHHHHhhhc-chhhhcC
Confidence            9998877888888888875 5666665

>d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=84.05  E-value=1.1  Score=32.19  Aligned_cols=37  Identities=19%  Similarity=0.371  Sum_probs=30.8

Q ss_pred             CCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecCh
Q 017916          179 IGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDD  216 (364)
Q Consensus       179 ~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~  216 (364)
                      ++++.+|+|.|+|.+|.-++..++.+|. .|..++..+
T Consensus        32 ~~~~k~v~VIGgG~iG~E~A~~l~~~g~-~Vtvie~~~   68 (133)
T d1q1ra2          32 LIADNRLVVIGGGYIGLEVAATAIKANM-HVTLLDTAA   68 (133)
T ss_dssp             CCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSS
T ss_pred             hccCCEEEEECCchHHHHHHHHHHhhCc-ceeeeeecc
Confidence            4567899999999999999999999999 566666544

>d2gqfa1 c.3.1.8 (A:1-194,A:343-401) Hypothetical protein HI0933 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: HI0933 N-terminal domain-like
domain: Hypothetical protein HI0933
species: Haemophilus influenzae [TaxId: 727]

Probab=84.01  E-value=0.5  Score=38.05  Aligned_cols=32  Identities=25%  Similarity=0.476  Sum_probs=27.0

Q ss_pred             EEEEEcCCHHHHHHHHHHHHCCCCEEEEEecCh
Q 017916          184 NVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDD  216 (364)
Q Consensus       184 ~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~  216 (364)
                      -|+|.|+|+.|++++..+...|. .|.+++..+
T Consensus         6 DViIIGaG~aGl~aA~~la~~G~-~V~vlEk~~   37 (253)
T d2gqfa1           6 ENIIIGAGAAGLFCAAQLAKLGK-SVTVFDNGK   37 (253)
T ss_dssp             SEEEECCSHHHHHHHHHHHHTTC-CEEEECSSS
T ss_pred             cEEEECcCHHHHHHHHHHHHCCC-cEEEEecCC
Confidence            37888999999999999999998 577887654

>d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Putative formate dehydrogenase
species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]

Probab=83.93  E-value=0.79  Score=34.99  Aligned_cols=83  Identities=16%  Similarity=0.131  Sum_probs=55.5

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcCCCccEEEE
Q 017916          181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  260 (364)
Q Consensus       181 ~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid  260 (364)
                      .|.+|.|+|.|.+|...+++++.+|+ .|++.+++...       +....  +    .++.    ++.    ...|+++.
T Consensus        41 ~gk~vgIiG~G~IG~~va~~l~~~g~-~v~~~d~~~~~-------~~~~~--~----~~l~----ell----~~sDiv~~   98 (181)
T d1qp8a1          41 QGEKVAVLGLGEIGTRVGKILAALGA-QVRGFSRTPKE-------GPWRF--T----NSLE----EAL----REARAAVC   98 (181)
T ss_dssp             TTCEEEEESCSTHHHHHHHHHHHTTC-EEEEECSSCCC-------SSSCC--B----SCSH----HHH----TTCSEEEE
T ss_pred             cCceEEEeccccccccceeeeecccc-ccccccccccc-------cceee--e----echh----hhh----hccchhhc
Confidence            57899999999999999999999999 68888765421       11110  1    1222    222    45788887


Q ss_pred             CCCC-HHHH----HHHHHhcccCCEEEEEc
Q 017916          261 CAGF-NKTM----STALSATRAGGKVCLVG  285 (364)
Q Consensus       261 ~~g~-~~~~----~~~~~~l~~~G~~v~~g  285 (364)
                      ++.- +++.    ...++.|+++..++.++
T Consensus        99 ~~pl~~~t~~li~~~~l~~mk~~ailIN~~  128 (181)
T d1qp8a1          99 ALPLNKHTRGLVKYQHLALMAEDAVFVNVG  128 (181)
T ss_dssp             CCCCSTTTTTCBCHHHHTTSCTTCEEEECS
T ss_pred             ccccccccccccccceeeeccccceEEecc
Confidence            5531 1111    35778889999888875

>d1diha1 c.2.1.3 (A:2-130,A:241-273) Dihydrodipicolinate reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Escherichia coli [TaxId: 562]

Probab=83.74  E-value=0.61  Score=34.92  Aligned_cols=93  Identities=23%  Similarity=0.263  Sum_probs=54.7

Q ss_pred             EEEEEcC-CHHHHHHHHHHHHC-CCCEEEEEecChhHH---HHHHHcCCC--eEEecCCCcccHHHHHHHHHHHcCCCcc
Q 017916          184 NVLIMGA-GPIGLVTMLGARAF-GAPRIVIVDVDDYRL---SVAKELGAD--NIVKVSTNLQDIAEEVEKIQKAMGTGID  256 (364)
Q Consensus       184 ~VLI~Ga-g~~G~~ai~la~~~-g~~~vv~~~~~~~~~---~~~~~lg~~--~~~~~~~~~~~~~~~i~~~~~~~~~~~d  256 (364)
                      +|.|+|+ |-+|++.++.+... +++.+.++++.....   +.-+-.+..  .+...++. +.           .-..+|
T Consensus         6 kI~i~Ga~GrMG~~i~~~i~~~~~~~lv~~~~~~~~~~~g~d~~~~~~~~~~~~~~~~~~-~~-----------~~~~~D   73 (162)
T d1diha1           6 RVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSLLGSDAGELAGAGKTGVTVQSSL-DA-----------VKDDFD   73 (162)
T ss_dssp             EEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTTCTTCSCCTTCSSSSSCCSCCEESCS-TT-----------TTTSCS
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecccchhccchhhhhhccccCCceeeccH-HH-----------Hhcccc
Confidence            6788898 99999999998765 665444554332211   000001110  00001111 00           124689


Q ss_pred             EEEECCCCHHHHHHHHHhcccCCEEEEEcCCCC
Q 017916          257 VSFDCAGFNKTMSTALSATRAGGKVCLVGMGHH  289 (364)
Q Consensus       257 ~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~  289 (364)
                      ++||.+- ++.....++.....+.=+.+|.++.
T Consensus        74 ViIDFs~-p~~~~~~~~~a~~~~~~~ViGTTG~  105 (162)
T d1diha1          74 VFIDFTR-PEGTLNHLAFCRQHGKGMVIGTTGF  105 (162)
T ss_dssp             EEEECSC-HHHHHHHHHHHHHTTCEEEECCCCC
T ss_pred             eEEEecc-HHHHHHHHHHHHhccceeEEecCCC
Confidence            9999988 7887887787777777777776554

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=83.68  E-value=1  Score=37.39  Aligned_cols=44  Identities=20%  Similarity=0.103  Sum_probs=32.2

Q ss_pred             CEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecCh--hHHHHHHHcCC
Q 017916          183 TNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDD--YRLSVAKELGA  227 (364)
Q Consensus       183 ~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~~--~~~~~~~~lg~  227 (364)
                      .+|||+|+ |-+|...+..+...|+ .|+++++..  .+.+.++.++.
T Consensus         1 k~vLItG~tGfiG~~l~~~Ll~~g~-~V~~~~r~~~~~~~~~l~~~~~   47 (321)
T d1rpna_           1 RSALVTGITGQDGAYLAKLLLEKGY-RVHGLVARRSSDTRWRLRELGI   47 (321)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCCSSCCCHHHHHTTC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcC-EEEEEECCCCcccHHHHHHhcc
Confidence            37999998 9999999998888899 567776533  23455555554

>d1fl2a1 c.3.1.5 (A:212-325,A:452-521) Alkyl hydroperoxide reductase subunit F (AhpF), C-terminal domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Alkyl hydroperoxide reductase subunit F (AhpF), C-terminal domains
species: Escherichia coli [TaxId: 562]

Probab=83.12  E-value=0.59  Score=35.30  Aligned_cols=29  Identities=28%  Similarity=0.444  Sum_probs=24.9

Q ss_pred             EEEEcCCHHHHHHHHHHHHCCCCEEEEEec
Q 017916          185 VLIMGAGPIGLVTMLGARAFGAPRIVIVDV  214 (364)
Q Consensus       185 VLI~Gag~~G~~ai~la~~~g~~~vv~~~~  214 (364)
                      |+|.|+|+.|+.|+..|...|.+ +..++.
T Consensus         4 ViIIGgGpaGl~AAi~aar~G~~-v~iie~   32 (184)
T d1fl2a1           4 VLIVGSGPAGAAAAIYSARKGIR-TGLMGE   32 (184)
T ss_dssp             EEEECCSHHHHHHHHHHHTTTCC-EEEECS
T ss_pred             EEEECcCHHHHHHHHHHHHcCCe-EEEEEE
Confidence            78889999999999999999996 566653

>d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=83.08  E-value=0.59  Score=34.37  Aligned_cols=32  Identities=22%  Similarity=0.568  Sum_probs=27.4

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEe
Q 017916          181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVD  213 (364)
Q Consensus       181 ~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~  213 (364)
                      .|.+|||.|+|.+|..-+..+...|++ |.+++
T Consensus        12 ~gkrvLViGgG~va~~ka~~Ll~~GA~-VtVva   43 (150)
T d1kyqa1          12 KDKRILLIGGGEVGLTRLYKLMPTGCK-LTLVS   43 (150)
T ss_dssp             TTCEEEEEEESHHHHHHHHHHGGGTCE-EEEEE
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCCE-EEEEe
Confidence            578999999999999999999999995 55553

>d2i0za1 c.3.1.8 (A:1-192,A:362-420) Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: HI0933 N-terminal domain-like
domain: Flavoprotein BC4706
species: Bacillus cereus [TaxId: 1396]

Probab=83.02  E-value=0.58  Score=37.33  Aligned_cols=31  Identities=35%  Similarity=0.804  Sum_probs=25.8

Q ss_pred             EEEEcCCHHHHHHHHHHHHCCCCEEEEEecCh
Q 017916          185 VLIMGAGPIGLVTMLGARAFGAPRIVIVDVDD  216 (364)
Q Consensus       185 VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~  216 (364)
                      |+|.|+|..|++++..+...|. .|++++..+
T Consensus         5 ViIIGaG~aGl~aA~~la~~G~-~V~liEk~~   35 (251)
T d2i0za1           5 VIVIGGGPSGLMAAIGAAEEGA-NVLLLDKGN   35 (251)
T ss_dssp             EEEECCSHHHHHHHHHHHHTTC-CEEEECSSS
T ss_pred             EEEECcCHHHHHHHHHHHHCCC-cEEEEeCCC
Confidence            7888999999999888888999 577777544

>d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Transcription corepressor CtbP
species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]

Probab=82.78  E-value=0.81  Score=35.31  Aligned_cols=90  Identities=20%  Similarity=0.286  Sum_probs=56.0

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcCCCccEEEE
Q 017916          181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  260 (364)
Q Consensus       181 ~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid  260 (364)
                      .|.+|.|.|.|.+|...+++++.+|+ .|++.+..... +.....+....       .++.+.++        ..|+|.-
T Consensus        48 ~gktvgIiG~G~IG~~va~~l~~fg~-~v~~~d~~~~~-~~~~~~~~~~~-------~~l~~ll~--------~sD~i~~  110 (193)
T d1mx3a1          48 RGETLGIIGLGRVGQAVALRAKAFGF-NVLFYDPYLSD-GVERALGLQRV-------STLQDLLF--------HSDCVTL  110 (193)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHTTTC-EEEEECTTSCT-THHHHHTCEEC-------SSHHHHHH--------HCSEEEE
T ss_pred             eCceEEEeccccccccceeeeecccc-ceeeccCcccc-cchhhhccccc-------cchhhccc--------cCCEEEE
Confidence            57899999999999999999999999 57777654332 22233343221       12222221        3577765


Q ss_pred             CCC-CHHH---H-HHHHHhcccCCEEEEEcCC
Q 017916          261 CAG-FNKT---M-STALSATRAGGKVCLVGMG  287 (364)
Q Consensus       261 ~~g-~~~~---~-~~~~~~l~~~G~~v~~g~~  287 (364)
                      ++. ++++   + ...++.|+++..++..+.+
T Consensus       111 ~~plt~~T~~li~~~~l~~mk~~a~lIN~sRG  142 (193)
T d1mx3a1         111 HCGLNEHNHHLINDFTVKQMRQGAFLVNTARG  142 (193)
T ss_dssp             CCCCCTTCTTSBSHHHHTTSCTTEEEEECSCT
T ss_pred             eecccccchhhhhHHHHhccCCCCeEEecCCc
Confidence            443 1111   1 2467788888888777643

>d1qopb_ c.79.1.1 (B:) Tryptophan synthase, beta-subunit {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: Tryptophan synthase, beta-subunit
species: Salmonella typhimurium [TaxId: 90371]

Probab=82.77  E-value=5.1  Score=34.27  Aligned_cols=49  Identities=18%  Similarity=0.325  Sum_probs=35.6

Q ss_pred             CEEEEE-cCCHHHHHHHHHHHHCCCCEEEEEec-----ChhHHHHHHHcCCCeEE
Q 017916          183 TNVLIM-GAGPIGLVTMLGARAFGAPRIVIVDV-----DDYRLSVAKELGADNIV  231 (364)
Q Consensus       183 ~~VLI~-Gag~~G~~ai~la~~~g~~~vv~~~~-----~~~~~~~~~~lg~~~~~  231 (364)
                      .++++. ++|.-|.+++..|+.+|.+.++....     ...+...++.+|++.+.
T Consensus       103 ~~iv~easaGN~g~a~A~aaa~~Gl~~~I~mp~~~~~~k~~~v~~m~~~GAeVv~  157 (390)
T d1qopb_         103 SEIIAETGAGQHGVASALASALLGLKCRIYMGAKDVERQSPNVFRMRLMGAEVIP  157 (390)
T ss_dssp             CEEEEEESSSHHHHHHHHHHHHHTCEEEEEEEHHHHHHCHHHHHHHHHTTCEEEE
T ss_pred             ceeeeehhHHHHHHHHHHHHHhccCceEEeecccccccchHHHHHHHhcCceEEE
Confidence            456664 67999999999999999976666532     23446667889986543

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=82.63  E-value=2.2  Score=35.67  Aligned_cols=30  Identities=37%  Similarity=0.480  Sum_probs=25.5

Q ss_pred             CEEEEEcC-CHHHHHHHHHHHHCCCCEEEEEe
Q 017916          183 TNVLIMGA-GPIGLVTMLGARAFGAPRIVIVD  213 (364)
Q Consensus       183 ~~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~  213 (364)
                      ++|||+|+ |-+|...+..+...|.+ |++++
T Consensus         3 kKILITG~tGfIGs~lv~~Ll~~g~~-V~~ld   33 (346)
T d1ek6a_           3 EKVLVTGGAGYIGSHTVLELLEAGYL-PVVID   33 (346)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHTTCC-EEEEE
T ss_pred             CeEEEECCCcHHHHHHHHHHHHCcCE-EEEEE
Confidence            58999998 99999999999889985 56664

>d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=82.59  E-value=1  Score=31.30  Aligned_cols=34  Identities=26%  Similarity=0.581  Sum_probs=28.2

Q ss_pred             CCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecCh
Q 017916          182 ETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDD  216 (364)
Q Consensus       182 g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~  216 (364)
                      .++++|.|+|.+|.-+++.++.+|. .|..++..+
T Consensus        21 p~~vvIiGgG~~G~E~A~~l~~~g~-~Vtlve~~~   54 (115)
T d1lvla2          21 PQHLVVVGGGYIGLELGIAYRKLGA-QVSVVEARE   54 (115)
T ss_dssp             CSEEEEECCSHHHHHHHHHHHHHTC-EEEEECSSS
T ss_pred             CCeEEEECCCHHHHHHHHHHhhccc-ceEEEeeec
Confidence            4799999999999999999999999 466665543

>d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Mammalian thioredoxin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=82.58  E-value=0.94  Score=31.94  Aligned_cols=31  Identities=19%  Similarity=0.149  Sum_probs=26.7

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHCCCCEEEE
Q 017916          181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVI  211 (364)
Q Consensus       181 ~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~  211 (364)
                      ..++++|.|+|.+|+=.++.++.+|.++.+.
T Consensus        19 ~P~~vvIIGgG~iG~E~A~~l~~lG~~Vtii   49 (122)
T d1h6va2          19 CPGKTLVVGASYVALECAGFLAGIGLDVTVM   49 (122)
T ss_dssp             CCCSEEEECCSHHHHHHHHHHHHTTCCEEEE
T ss_pred             CCCeEEEECCCccHHHHHHHHhhcCCeEEEE
Confidence            4478999999999999999999999975544

>d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Sheep (Ovis orientalis aries) [TaxId: 9940]

Probab=82.50  E-value=7.6  Score=28.73  Aligned_cols=44  Identities=11%  Similarity=0.158  Sum_probs=35.6

Q ss_pred             CEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCC
Q 017916          183 TNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGA  227 (364)
Q Consensus       183 ~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~  227 (364)
                      .+|-+.|.|.+|...+.-+...|+ .|++.++++++.+.+.+.++
T Consensus         3 ~nIg~IGlG~MG~~mA~~L~~~G~-~V~v~dr~~~~~~~l~~~~~   46 (176)
T d2pgda2           3 ADIALIGLAVMGQNLILNMNDHGF-VVCAFNRTVSKVDDFLANEA   46 (176)
T ss_dssp             BSEEEECCSHHHHHHHHHHHHTTC-CEEEECSSTHHHHHHHHTTT
T ss_pred             CcEEEEeEhHHHHHHHHHHHHCCC-eEEEEcCCHHHHHHHHHhcc
Confidence            468889999999888887778899 57889999998887766543

>d2cl5a1 c.66.1.1 (A:3-216) Catechol O-methyltransferase, COMT {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: COMT-like
domain: Catechol O-methyltransferase, COMT
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=82.44  E-value=1.5  Score=34.35  Aligned_cols=100  Identities=16%  Similarity=0.169  Sum_probs=58.9

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHCCC-CEEEEEecChhHHHHHH----HcCCCeEEecCCCcccHHHHHHHHHHHc-CCC
Q 017916          181 PETNVLIMGAGPIGLVTMLGARAFGA-PRIVIVDVDDYRLSVAK----ELGADNIVKVSTNLQDIAEEVEKIQKAM-GTG  254 (364)
Q Consensus       181 ~g~~VLI~Gag~~G~~ai~la~~~g~-~~vv~~~~~~~~~~~~~----~lg~~~~~~~~~~~~~~~~~i~~~~~~~-~~~  254 (364)
                      ...+||-.|.+. |..++.+|++++. .++++++.+++..+.++    ..|...-+.+.  ..+..+.+..+.... ...
T Consensus        56 kpk~ILEiGt~~-G~Sti~la~al~~~g~v~sid~~~~~~~~a~~~~~~~gl~~~i~l~--~Gd~~e~l~~l~~~~~~~~  132 (214)
T d2cl5a1          56 SPSLVLELGAYC-GYSAVRMARLLQPGARLLTMEMNPDYAAITQQMLNFAGLQDKVTIL--NGASQDLIPQLKKKYDVDT  132 (214)
T ss_dssp             CCSEEEEECCTT-SHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEE--ESCHHHHGGGHHHHSCCCC
T ss_pred             CCCEEEEEccCc-hhHHHHHHHhCCCccEEEEEeccHHHHHHHHHHHHHcCCCccceee--eccccccccchhhcccccc
Confidence            446899998643 6677888887632 37999999887766554    45654312211  134444444443322 346


Q ss_pred             ccEEE-ECCCCHH----HHHHHHHhcccCCEEEE
Q 017916          255 IDVSF-DCAGFNK----TMSTALSATRAGGKVCL  283 (364)
Q Consensus       255 ~d~vi-d~~g~~~----~~~~~~~~l~~~G~~v~  283 (364)
                      +|++| |+.-...    .+...++.|+|||.++.
T Consensus       133 ~D~ifiD~~~~~~~~~~~l~~~~~lLkpGGvIv~  166 (214)
T d2cl5a1         133 LDMVFLDHWKDRYLPDTLLLEKCGLLRKGTVLLA  166 (214)
T ss_dssp             EEEEEECSCGGGHHHHHHHHHHTTCEEEEEEEEE
T ss_pred             cceeeecccccccccHHHHHHHhCccCCCcEEEE
Confidence            89886 4332211    23345667899997654

>d1o58a_ c.79.1.1 (A:) O-acetylserine sulfhydrylase (Cysteine synthase) {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Thermotoga maritima [TaxId: 2336]

Probab=82.43  E-value=11  Score=30.49  Aligned_cols=101  Identities=21%  Similarity=0.188  Sum_probs=61.2

Q ss_pred             EEEEcCCHHHHHHHHHHHHCCCCEEEEEec--ChhHHHHHHHcCCCeEEecCC-------------------------Cc
Q 017916          185 VLIMGAGPIGLVTMLGARAFGAPRIVIVDV--DDYRLSVAKELGADNIVKVST-------------------------NL  237 (364)
Q Consensus       185 VLI~Gag~~G~~ai~la~~~g~~~vv~~~~--~~~~~~~~~~lg~~~~~~~~~-------------------------~~  237 (364)
                      |....+|..|.+++..|+.+|.+.++.+..  ++.|.+.++.+|+.-+..-.+                         ..
T Consensus        58 vv~~SsGN~g~a~A~~a~~~g~~~~i~~p~~~~~~k~~~~~~~GA~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  137 (293)
T d1o58a_          58 IVEPTSGNMGIAIAMIGAKRGHRVILTMPETMSVERRKVLKMLGAELVLTPGELGMKGAVEKALEISRETGAHMLNQFEN  137 (293)
T ss_dssp             EEEECSSHHHHHHHHHHHHHTCCEEEEEETTSCHHHHHHHHHTTCEEEEECGGGHHHHHHHHHHHHHHHHCCBCCCTTTC
T ss_pred             eEEecCcchhhHHHHhhhhccceeEeeccccccHHHeeccccCCcEEEEecCcchhhHHHHHHHHHHhccCCEEeeeccc
Confidence            333456999999999999999986666643  567888899999864321100                         00


Q ss_pred             c-cHHH----HHHHHHHHcCCCccEEEECCCCHHHHHHHHHhc---cc-CCEEEEEc
Q 017916          238 Q-DIAE----EVEKIQKAMGTGIDVSFDCAGFNKTMSTALSAT---RA-GGKVCLVG  285 (364)
Q Consensus       238 ~-~~~~----~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l---~~-~G~~v~~g  285 (364)
                      . .+..    ...++....+..+|++|-++|++..+.-++..+   .+ +-+++.+.
T Consensus       138 ~~~~~~~~~t~~~Ei~~q~~~~~d~vv~~vG~Gg~~~Gi~~~~k~~~~~~~~ii~ve  194 (293)
T d1o58a_         138 PYNVYSHQFTTGPEILKQMDYQIDAFVAGVGTGGTISGVGRVLKGFFGNGVKIVAVE  194 (293)
T ss_dssp             HHHHHHHHHTHHHHHHHHTTTCCSEEEEECSSSHHHHHHHHHHHHHHGGGSEEEEEE
T ss_pred             cceeeeccccHHHhhhhhcCCCCCEEEEecCcchhHHHHHHHHHHHCCCCCeEEEEe
Confidence            0 0111    111122223556899999888776665555444   23 35777665

>d1hwxa1 c.2.1.7 (A:209-501) Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Cow (Bos taurus) [TaxId: 9913]

Probab=82.39  E-value=0.97  Score=37.24  Aligned_cols=32  Identities=31%  Similarity=0.485  Sum_probs=28.2

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEe
Q 017916          181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVD  213 (364)
Q Consensus       181 ~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~  213 (364)
                      .|.+|+|.|-|.+|..+++++...|+ +|++++
T Consensus        35 ~gktvaIqGfGnVG~~~A~~L~e~Ga-kvv~vs   66 (293)
T d1hwxa1          35 GDKTFAVQGFGNVGLHSMRYLHRFGA-KCVAVG   66 (293)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEE
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEE
Confidence            57899999999999999999999999 566654

>d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: GDI-like N domain
domain: Guanine nucleotide dissociation inhibitor, GDI
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=82.32  E-value=0.64  Score=36.60  Aligned_cols=31  Identities=19%  Similarity=0.319  Sum_probs=26.7

Q ss_pred             EEEEcCCHHHHHHHHHHHHCCCCEEEEEecCh
Q 017916          185 VLIMGAGPIGLVTMLGARAFGAPRIVIVDVDD  216 (364)
Q Consensus       185 VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~  216 (364)
                      |+|.|+|..|+.++..+...|. .|.+++..+
T Consensus         8 viViGaG~~Gl~~A~~La~~G~-~V~vlE~~~   38 (297)
T d2bcgg1           8 VIVLGTGITECILSGLLSVDGK-KVLHIDKQD   38 (297)
T ss_dssp             EEEECCSHHHHHHHHHHHHTTC-CEEEECSSS
T ss_pred             EEEECcCHHHHHHHHHHHHCCC-CEEEEcCCC
Confidence            7888999999999999989998 588888754

>d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Neisseria meningitidis [TaxId: 487]

Probab=82.24  E-value=1.1  Score=31.83  Aligned_cols=35  Identities=29%  Similarity=0.423  Sum_probs=28.9

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecC
Q 017916          180 GPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVD  215 (364)
Q Consensus       180 ~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~  215 (364)
                      +..++++|.|+|.+|+=+++..+.+|. .|..+...
T Consensus        24 ~~p~~vvIiGgG~IG~E~A~~~~~~G~-~Vtive~~   58 (125)
T d1ojta2          24 EVPGKLLIIGGGIIGLEMGTVYSTLGS-RLDVVEMM   58 (125)
T ss_dssp             CCCSEEEEESCSHHHHHHHHHHHHHTC-EEEEECSS
T ss_pred             ccCCeEEEECCCHHHHHHHHHhhcCCC-EEEEEEee
Confidence            445899999999999999999999999 45666543

>d1trba1 c.3.1.5 (A:1-118,A:245-316) Thioredoxin reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Thioredoxin reductase
species: Escherichia coli [TaxId: 562]

Probab=82.19  E-value=0.37  Score=36.96  Aligned_cols=33  Identities=24%  Similarity=0.419  Sum_probs=27.3

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEec
Q 017916          181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDV  214 (364)
Q Consensus       181 ~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~  214 (364)
                      ++..|+|.|+|+.|+.|+..+..+|.+ +++++.
T Consensus         4 k~~dVvIIGGGpaGl~AA~~~ar~g~~-v~iie~   36 (190)
T d1trba1           4 KHSKLLILGSGPAGYTAAVYAARANLQ-PVLITG   36 (190)
T ss_dssp             EEEEEEEECCSHHHHHHHHHHHTTTCC-CEEECC
T ss_pred             CCCcEEEECCCHHHHHHHHHHHHcCCc-eEEEEe
Confidence            345799999999999999999999996 555554

>d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=82.17  E-value=3.2  Score=30.17  Aligned_cols=38  Identities=24%  Similarity=0.477  Sum_probs=30.4

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHCCC-CEEEEEecChhH
Q 017916          181 PETNVLIMGAGPIGLVTMLGARAFGA-PRIVIVDVDDYR  218 (364)
Q Consensus       181 ~g~~VLI~Gag~~G~~ai~la~~~g~-~~vv~~~~~~~~  218 (364)
                      .+.+|.|.|+|.+|..++..+...+. ..++.++..+++
T Consensus         5 ~~~KI~IiGaG~vG~~~a~~l~~~~l~~el~L~Di~~~~   43 (148)
T d1ldna1           5 GGARVVVIGAGFVGASYVFALMNQGIADEIVLIDANESK   43 (148)
T ss_dssp             TSCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHH
T ss_pred             CCCeEEEECcCHHHHHHHHHHHhcCCCceEEEEeecccc
Confidence            46789999999999998888877664 468888877765

>d1jsxa_ c.66.1.20 (A:) Glucose-inhibited division protein B (GidB) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Glucose-inhibited division protein B (GidB)
domain: Glucose-inhibited division protein B (GidB)
species: Escherichia coli [TaxId: 562]

Probab=82.15  E-value=2.6  Score=32.67  Aligned_cols=95  Identities=16%  Similarity=0.188  Sum_probs=60.1

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHH----HcCCCeEEecCCCcccHHHHHHHHHHHcCCCcc
Q 017916          181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAK----ELGADNIVKVSTNLQDIAEEVEKIQKAMGTGID  256 (364)
Q Consensus       181 ~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~----~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d  256 (364)
                      ++++++=.|+|+ |.-.+-+|-...-..+..+++..+|..+++    +|+...+..++..-+++.         ....+|
T Consensus        65 ~~~~ilDiGsGa-G~PGi~laI~~p~~~~~Lves~~KK~~FL~~~~~~L~L~nv~v~~~R~E~~~---------~~~~fD  134 (207)
T d1jsxa_          65 QGERFIDVGTGP-GLPGIPLSIVRPEAHFTLLDSLGKRVRFLRQVQHELKLENIEPVQSRVEEFP---------SEPPFD  134 (207)
T ss_dssp             CSSEEEEETCTT-TTTHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTCSSEEEEECCTTTSC---------CCSCEE
T ss_pred             cCCceeeeeccC-CceeeehhhhcccceEEEEecchHHHHHHHHHHHHcCCcceeeeccchhhhc---------cccccc
Confidence            456777677543 444455555555448999999999988765    478765443333322211         134689


Q ss_pred             EEEE-CCCCH-HHHHHHHHhcccCCEEEEEc
Q 017916          257 VSFD-CAGFN-KTMSTALSATRAGGKVCLVG  285 (364)
Q Consensus       257 ~vid-~~g~~-~~~~~~~~~l~~~G~~v~~g  285 (364)
                      +|+. ++++. ..+..+...++++|+++.+-
T Consensus       135 ~V~sRA~~~~~~ll~~~~~~l~~~g~~~~~K  165 (207)
T d1jsxa_         135 GVISRAFASLNDMVSWCHHLPGEQGRFYALK  165 (207)
T ss_dssp             EEECSCSSSHHHHHHHHTTSEEEEEEEEEEE
T ss_pred             eehhhhhcCHHHHHHHHHHhcCCCcEEEEEC
Confidence            8874 55543 45556667788999998873

>d1dxla1 c.3.1.5 (A:4-152,A:276-347) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=82.02  E-value=0.63  Score=36.29  Aligned_cols=30  Identities=30%  Similarity=0.551  Sum_probs=25.1

Q ss_pred             EEEEcCCHHHHHHHHHHHHCCCCEEEEEecC
Q 017916          185 VLIMGAGPIGLVTMLGARAFGAPRIVIVDVD  215 (364)
Q Consensus       185 VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~  215 (364)
                      |+|.|+|+.|+.++..+..+|.+ |++++..
T Consensus         6 vvVIGgGpaGl~aA~~aa~~G~k-V~vie~~   35 (221)
T d1dxla1           6 VVIIGGGPGGYVAAIKAAQLGFK-TTCIEKR   35 (221)
T ss_dssp             EEEECCSHHHHHHHHHHHHHTCC-EEEEECS
T ss_pred             EEEECCCHHHHHHHHHHHHCCCc-EEEEEec
Confidence            67789999999999999999995 6666543

>d2ivda1 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen oxidase {Myxococcus xanthus [TaxId: 34]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Myxococcus xanthus [TaxId: 34]

Probab=82.00  E-value=0.53  Score=38.38  Aligned_cols=31  Identities=29%  Similarity=0.478  Sum_probs=27.0

Q ss_pred             EEEEEcCCHHHHHHHHHHHHCCCCEEEEEecC
Q 017916          184 NVLIMGAGPIGLVTMLGARAFGAPRIVIVDVD  215 (364)
Q Consensus       184 ~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~  215 (364)
                      +|+|.|+|..|++++..+...|. .|.+++.+
T Consensus         2 ~V~IIGaG~aGL~aA~~L~~~G~-~V~vlE~~   32 (347)
T d2ivda1           2 NVAVVGGGISGLAVAHHLRSRGT-DAVLLESS   32 (347)
T ss_dssp             CEEEECCBHHHHHHHHHHHTTTC-CEEEECSS
T ss_pred             eEEEECCCHHHHHHHHHHHhCCC-CEEEEecC
Confidence            58999999999999999999999 47787754

>d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Conserved hypothetical protein MTH1747
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=81.98  E-value=3.5  Score=29.89  Aligned_cols=36  Identities=17%  Similarity=0.132  Sum_probs=27.2

Q ss_pred             EEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHH
Q 017916          184 NVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLS  220 (364)
Q Consensus       184 ~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~  220 (364)
                      +|-|.|.|.+|+..+.-++..|. .+++.+....+..
T Consensus         2 kIgiIG~G~mG~~ia~~l~~~g~-~v~~~~~~~~~~~   37 (152)
T d1i36a2           2 RVGFIGFGEVAQTLASRLRSRGV-EVVTSLEGRSPST   37 (152)
T ss_dssp             EEEEESCSHHHHHHHHHHHHTTC-EEEECCTTCCHHH
T ss_pred             EEEEEcHHHHHHHHHHHHHHCCC-eEEEEcCchhHHH
Confidence            57788999999999998888898 4666655544433

>d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Fatty oxidation complex alpha subunit, middle domain
species: Pseudomonas fragi [TaxId: 296]

Probab=81.93  E-value=0.98  Score=34.55  Aligned_cols=38  Identities=18%  Similarity=0.351  Sum_probs=31.4

Q ss_pred             CEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHH
Q 017916          183 TNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSV  221 (364)
Q Consensus       183 ~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~  221 (364)
                      .+|.|.|+|.+|...+.++...|+ .|...+.+++..+.
T Consensus         5 ~~vaViGaG~mG~~iA~~~a~~G~-~V~l~D~~~~~l~~   42 (186)
T d1wdka3           5 KQAAVLGAGIMGGGIAYQSASKGT-PILMKDINEHGIEQ   42 (186)
T ss_dssp             SSEEEECCHHHHHHHHHHHHHTTC-CEEEECSSHHHHHH
T ss_pred             CEEEEECcCHHHHHHHHHHHhCCC-eEEEEECCHHHHhh
Confidence            579999999999998888888899 57888888776543

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=81.89  E-value=1.3  Score=35.72  Aligned_cols=31  Identities=26%  Similarity=0.426  Sum_probs=26.7

Q ss_pred             EEEEEcC-CHHHHHHHHHHHHCCCCEEEEEecC
Q 017916          184 NVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVD  215 (364)
Q Consensus       184 ~VLI~Ga-g~~G~~ai~la~~~g~~~vv~~~~~  215 (364)
                      +|||+|+ |-+|...+..++..|. .|++++++
T Consensus         3 KIlItGasGfiG~~l~~~L~~~g~-~Vi~~~r~   34 (281)
T d1vl0a_           3 KILITGANGQLGREIQKQLKGKNV-EVIPTDVQ   34 (281)
T ss_dssp             EEEEESTTSHHHHHHHHHHTTSSE-EEEEECTT
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCC-EEEEeech
Confidence            6999998 9999999999999998 57777654

>d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=81.58  E-value=1.4  Score=31.16  Aligned_cols=34  Identities=24%  Similarity=0.269  Sum_probs=28.4

Q ss_pred             CCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecCh
Q 017916          182 ETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDD  216 (364)
Q Consensus       182 g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~  216 (364)
                      ..+++|.|+|.+|+-++..++.+|. .|..+.+++
T Consensus        22 pk~vvIvGgG~iG~E~A~~l~~~G~-~Vtlv~~~~   55 (125)
T d3grsa2          22 PGRSVIVGAGYIAVEMAGILSALGS-KTSLMIRHD   55 (125)
T ss_dssp             CSEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSS
T ss_pred             CCEEEEEcCCccHHHHHHHHhcCCc-EEEEEeecc
Confidence            3799999999999999999999999 466665543

>d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Toxoplasma gondii [TaxId: 5811]

Probab=81.43  E-value=1.5  Score=32.31  Aligned_cols=39  Identities=21%  Similarity=0.155  Sum_probs=31.7

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhH
Q 017916          180 GPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYR  218 (364)
Q Consensus       180 ~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~  218 (364)
                      ++..+|.|.|+|.+|...+.++...+...++.++..+++
T Consensus         5 ~k~~KI~IIGaG~VG~~lA~~l~~~~~~el~L~D~~~~~   43 (154)
T d1pzga1           5 QRRKKVAMIGSGMIGGTMGYLCALRELADVVLYDVVKGM   43 (154)
T ss_dssp             SCCCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSSH
T ss_pred             cCCCcEEEECCCHHHHHHHHHHHhCCCceEEEEEecccc
Confidence            456789999999999988888888787678888876654

>d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=81.41  E-value=1.5  Score=33.38  Aligned_cols=89  Identities=21%  Similarity=0.219  Sum_probs=57.7

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEecCCCcccHHHHHHHHHHHcCCCccEEEE
Q 017916          181 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD  260 (364)
Q Consensus       181 ~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid  260 (364)
                      .|.++.|.|.|.+|+..+++++.+|. .|++.++...+... ...+...        .++.+    +.    ...|+|+-
T Consensus        43 ~~k~vgiiG~G~IG~~va~~~~~fg~-~v~~~d~~~~~~~~-~~~~~~~--------~~l~e----ll----~~sDiv~~  104 (184)
T d1ygya1          43 FGKTVGVVGLGRIGQLVAQRIAAFGA-YVVAYDPYVSPARA-AQLGIEL--------LSLDD----LL----ARADFISV  104 (184)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHTTTC-EEEEECTTSCHHHH-HHHTCEE--------CCHHH----HH----HHCSEEEE
T ss_pred             cceeeeeccccchhHHHHHHhhhccc-eEEeecCCCChhHH-hhcCcee--------ccHHH----HH----hhCCEEEE
Confidence            57899999999999999999999999 67888765444332 2334321        12222    22    23688776


Q ss_pred             CCC-CHH---HH-HHHHHhcccCCEEEEEcCC
Q 017916          261 CAG-FNK---TM-STALSATRAGGKVCLVGMG  287 (364)
Q Consensus       261 ~~g-~~~---~~-~~~~~~l~~~G~~v~~g~~  287 (364)
                      ++. +++   .+ ...++.|+++..++.++.+
T Consensus       105 ~~Plt~~T~~lin~~~l~~mk~~a~lIN~sRG  136 (184)
T d1ygya1         105 HLPKTPETAGLIDKEALAKTKPGVIIVNAARG  136 (184)
T ss_dssp             CCCCSTTTTTCBCHHHHTTSCTTEEEEECSCT
T ss_pred             cCCCCchhhhhhhHHHHhhhCCCceEEEecch
Confidence            543 121   11 2567888888888877643

>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn Mja218
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=81.23  E-value=3.4  Score=29.09  Aligned_cols=60  Identities=20%  Similarity=0.266  Sum_probs=46.8

Q ss_pred             HHHHcCCCCCCEEEEE-cCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHHcCCCeEEe
Q 017916          173 ACRRANIGPETNVLIM-GAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVK  232 (364)
Q Consensus       173 ~l~~~~~~~g~~VLI~-Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~lg~~~~~~  232 (364)
                      .++.+++..-+.+++. ..-..-..+.++++.+|.+.+++...+++..+.++++|++.+++
T Consensus        57 ~l~~~~i~~a~~vv~~t~~d~~N~~~~~~~k~~~~~~iI~~~~~~~~~~~l~~~G~d~vi~  117 (132)
T d1lssa_          57 TLEDAGIEDADMYIAVTGKEEVNLMSSLLAKSYGINKTIARISEIEYKDVFERLGVDVVVS  117 (132)
T ss_dssp             HHHHTTTTTCSEEEECCSCHHHHHHHHHHHHHTTCCCEEEECSSTTHHHHHHHTTCSEEEC
T ss_pred             hhhhcChhhhhhhcccCCcHHHHHHHHHHHHHcCCceEEEEecCHHHHHHHHHCCCCEEEC
Confidence            4577787777777665 33445678888999999988888877888888999999998774

>d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=80.93  E-value=0.88  Score=32.12  Aligned_cols=36  Identities=22%  Similarity=0.357  Sum_probs=29.8

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecCh
Q 017916          180 GPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDD  216 (364)
Q Consensus       180 ~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~  216 (364)
                      +..++++|.|+|.+|+=+++..+.+|. .|..+.+++
T Consensus        23 ~~p~~~viiG~G~iglE~A~~~~~~G~-~Vtvi~~~~   58 (123)
T d1dxla2          23 EIPKKLVVIGAGYIGLEMGSVWGRIGS-EVTVVEFAS   58 (123)
T ss_dssp             SCCSEEEESCCSHHHHHHHHHHHHHTC-EEEEECSSS
T ss_pred             ccCCeEEEEccchHHHHHHHHHHhcCC-eEEEEEEcc
Confidence            345899999999999999999999999 566665544

>d1bgva1 c.2.1.7 (A:195-449) Glutamate dehydrogenase {Clostridium symbiosum [TaxId: 1512]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Clostridium symbiosum [TaxId: 1512]

Probab=80.74  E-value=1.8  Score=34.91  Aligned_cols=41  Identities=17%  Similarity=0.154  Sum_probs=31.6

Q ss_pred             HHHHHHcC-CCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEE
Q 017916          171 LHACRRAN-IGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIV  212 (364)
Q Consensus       171 ~~~l~~~~-~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~  212 (364)
                      -.+++..+ --.|.+|+|.|-|.+|..+++++...|++ ++++
T Consensus        24 ~~~~~~~~~~l~g~~v~IQGfGnVG~~~a~~L~e~Gak-vvav   65 (255)
T d1bgva1          24 EAVMKHENDTLVGKTVALAGFGNVAWGAAKKLAELGAK-AVTL   65 (255)
T ss_dssp             HHHHHHTTCCSTTCEEEECCSSHHHHHHHHHHHHHTCE-EEEE
T ss_pred             HHHHHhCCCCCCCCEEEEECCCHHHHHHHHHHHHcCCe-EEEE
Confidence            33444433 24688999999999999999999999995 5555

>d2g72a1 c.66.1.15 (A:18-280) Phenylethanolamine N-methyltransferase, PNMTase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arylamine N-methyltransferase
domain: Phenylethanolamine N-methyltransferase, PNMTase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=80.69  E-value=3.3  Score=33.27  Aligned_cols=46  Identities=15%  Similarity=0.208  Sum_probs=31.9

Q ss_pred             cCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHHHH
Q 017916          177 ANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKE  224 (364)
Q Consensus       177 ~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~~~  224 (364)
                      .....|.++|=.|+|+ |...+..+... ...|++++-++...+.+++
T Consensus        50 ~g~~~g~~vLDiGcG~-g~~~~~~~~~~-~~~v~~~D~S~~~i~~~~~   95 (263)
T d2g72a1          50 TGEVSGRTLIDIGSGP-TVYQLLSACSH-FEDITMTDFLEVNRQELGR   95 (263)
T ss_dssp             TSCSCCSEEEEETCTT-CCGGGTTGGGG-CSEEEEECSCHHHHHHHHH
T ss_pred             CCCCCCcEEEEeccCC-CHHHHHHhccc-CCeEEEEeCCHHHHHHHHH
Confidence            3456789999999855 33333333333 3489999999998888765

>d1i8ta1 c.4.1.3 (A:1-244,A:314-367) UDP-galactopyranose mutase, N-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=80.67  E-value=0.61  Score=38.72  Aligned_cols=32  Identities=16%  Similarity=0.481  Sum_probs=27.0

Q ss_pred             EEEEEcCCHHHHHHHHHHHHCCCCEEEEEecCh
Q 017916          184 NVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDD  216 (364)
Q Consensus       184 ~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~  216 (364)
                      .|+|.|||..|+.++..+...|. .|.+++.++
T Consensus         3 dv~IIGaG~sGl~~A~~L~~~g~-~V~iiEk~~   34 (298)
T d1i8ta1           3 DYIIVGSGLFGAVCANELKKLNK-KVLVIEKRN   34 (298)
T ss_dssp             EEEEECCSHHHHHHHHHHGGGTC-CEEEECSSS
T ss_pred             cEEEECCcHHHHHHHHHHHhCCC-cEEEEECCC
Confidence            47899999999999999988898 578887654

>d1qzza2 c.66.1.12 (A:102-357) Aclacinomycin-10-hydroxylase RdmB {Streptomyces purpurascens [TaxId: 1924]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Plant O-methyltransferase, C-terminal domain
domain: Aclacinomycin-10-hydroxylase RdmB
species: Streptomyces purpurascens [TaxId: 1924]

Probab=80.26  E-value=2  Score=34.47  Aligned_cols=101  Identities=19%  Similarity=0.157  Sum_probs=60.7

Q ss_pred             HHcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCCEEEEEecChhHHHHH----HHcCCCeEEecCCCcccHHHHHHHHHHH
Q 017916          175 RRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA----KELGADNIVKVSTNLQDIAEEVEKIQKA  250 (364)
Q Consensus       175 ~~~~~~~g~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~~~~~~~----~~lg~~~~~~~~~~~~~~~~~i~~~~~~  250 (364)
                      +...+....+||=.|+|. |..++.+++...--.+++++. ++-.+.+    .+.+....+.+..  .++.       ..
T Consensus        75 ~~~d~~~~~~vlDvG~G~-G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~~~~~~~~~~~ri~~~~--~d~~-------~~  143 (256)
T d1qzza2          75 DAYDWSAVRHVLDVGGGN-GGMLAAIALRAPHLRGTLVEL-AGPAERARRRFADAGLADRVTVAE--GDFF-------KP  143 (256)
T ss_dssp             HTSCCTTCCEEEEETCTT-SHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEE--CCTT-------SC
T ss_pred             hcCCCccCCEEEEECCCC-CHHHHHHHHhhcCcEEEEecC-hHHHHHHHHHHhhcCCcceeeeee--eecc-------cc
Confidence            445667778898888755 789999999874436788875 4333333    3334321111100  1110       00


Q ss_pred             cCCCccEEEECC-----CC---HHHHHHHHHhcccCCEEEEEcC
Q 017916          251 MGTGIDVSFDCA-----GF---NKTMSTALSATRAGGKVCLVGM  286 (364)
Q Consensus       251 ~~~~~d~vid~~-----g~---~~~~~~~~~~l~~~G~~v~~g~  286 (364)
                      ...++|+++-..     ..   ...++++.+.|+|+|+++.+..
T Consensus       144 ~p~~~D~v~~~~vLh~~~d~~~~~lL~~i~~~LkpgG~llI~d~  187 (256)
T d1qzza2         144 LPVTADVVLLSFVLLNWSDEDALTILRGCVRALEPGGRLLVLDR  187 (256)
T ss_dssp             CSCCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred             ccccchhhhccccccccCcHHHHHHHHHHHhhcCCcceeEEEEe
Confidence            135688887431     21   2457789999999999998863

>d1vdca1 c.3.1.5 (A:1-117,A:244-316) Thioredoxin reductase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Thioredoxin reductase
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=80.22  E-value=0.92  Score=34.66  Aligned_cols=31  Identities=19%  Similarity=0.269  Sum_probs=25.8

Q ss_pred             CEEEEEcCCHHHHHHHHHHHHCCCCEEEEEec
Q 017916          183 TNVLIMGAGPIGLVTMLGARAFGAPRIVIVDV  214 (364)
Q Consensus       183 ~~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~  214 (364)
                      ..|+|.|+|+.|+.|+..|...|.+ +++++.
T Consensus         6 ~~VvIIGgGpaGl~aA~~~ar~g~~-v~vie~   36 (192)
T d1vdca1           6 TRLCIVGSGPAAHTAAIYAARAELK-PLLFEG   36 (192)
T ss_dssp             EEEEEECCSHHHHHHHHHHHHTTCC-CEEECC
T ss_pred             ceEEEECCCHHHHHHHHHHHHcCCc-EEEEEe
Confidence            4789999999999999999999996 555553

>d1w4xa1 c.3.1.5 (A:10-154,A:390-542) Phenylacetone monooxygenase {Thermobifida fusca [TaxId: 2021]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Phenylacetone monooxygenase
species: Thermobifida fusca [TaxId: 2021]

Probab=80.13  E-value=0.83  Score=37.92  Aligned_cols=32  Identities=28%  Similarity=0.604  Sum_probs=27.2

Q ss_pred             EEEEEcCCHHHHHHHHHHHHCCCCEEEEEecCh
Q 017916          184 NVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDD  216 (364)
Q Consensus       184 ~VLI~Gag~~G~~ai~la~~~g~~~vv~~~~~~  216 (364)
                      .|+|.|||..|++++..++..|.+ +++.+..+
T Consensus         9 dV~IIGAG~sGl~~a~~L~~~G~~-v~i~Ek~~   40 (298)
T d1w4xa1           9 DVLVVGAGFSGLYALYRLRELGRS-VHVIETAG   40 (298)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTCC-EEEECSSS
T ss_pred             CEEEECccHHHHHHHHHHHhCCCC-EEEEEcCC
Confidence            578899999999999999999994 77777644

>d1q1ra1 c.3.1.5 (A:2-114,A:248-319) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=80.06  E-value=1.3  Score=33.23  Aligned_cols=30  Identities=33%  Similarity=0.510  Sum_probs=26.1

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHCCCCEEE
Q 017916          181 PETNVLIMGAGPIGLVTMLGARAFGAPRIV  210 (364)
Q Consensus       181 ~g~~VLI~Gag~~G~~ai~la~~~g~~~vv  210 (364)
                      .+++|+|.|+|.+|.-++..++.+|.++.+
T Consensus         2 ~~~~VvIIGgG~~G~e~A~~l~~~g~~v~v   31 (185)
T d1q1ra1           2 ANDNVVIVGTGLAGVEVAFGLRASGWEGNI   31 (185)
T ss_dssp             CSCEEEEECCSHHHHHHHHHHHHTTCCSEE
T ss_pred             CCCCEEEECCcHHHHHHHHHHHHcCCceEE
Confidence            578999999999999999999999987433