Citrus Sinensis ID: 017925

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360---
Protein Sequence
MYDQYGEAGVKSTVGGGSSAYTTNPFDLFETFFGPSMGGFPGMNQTGFRTRRRSTVTKGEDLRYDIVLEFSESIFGAEKEFELSHLETCEVCTGTGAKMGSKMRICSTCGGRGQVMRTDQTPFGLFSQVSVCPSCGGEGEVISEYCRKCSGEGRIRLKKNIKVKVPPGVSTGSILRVVGEGDAGPRGGPPGDLYVYLDVEEIPGIQRDGIDLFSTISISYLDAIMGTVVKVKTVEGISELQVPPGTQPGDVLVLAKKGAPKLNKPSIRGDHLFTVKVTIPNRISAKERELLEELASLRNTTGSRTRTRPKTQAATTTSPEASQVGTVAEKNEEPEDQNDPWKKLKDFAGSVANGALKWLKENL
Secondary Structure (PSIPRED)
ccccccccccccccccccccccccccccccHHcccccccccccccccccccccccccccccEEEEEEEEHHHHccccEEEEEEccccccccccccccccccccccccccccccEEEEEEEcccEEEEEEEEccccccccEEEcccccccccccEEEEEEEEEEEcccccccccEEEEcccccccccccccccEEEEEEEEcccccEEEcccEEEEEEccHHHHcccccEEEcccccEEEEEcccccccccEEEEccccccccccccccccEEEEEEEEccccccHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHc
Secondary Structure Prediction (SSPRO)
cccccccccccccccccccccccccHHHHHHHHcccccccccccccccccccccccccccccEEEEEEEHHHHHcccEEEEEEccccEcccccccccccccccccccccccccEEEEEEcccccEEEEEEEccccccccEEEcccccccccccEEEEEEEEEEEEccccccccEEEEEccccccccccccccEEEEEEEEccccEEEccccEEEEEEEEHHHHHHccEEEEEccccEEEEEEccccccccEEEEccccccccccccccccEEEEEEEEccccccHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHcc
Coil and Loop (DISEMBL)
mydqygeagvkstvgggssayttnpfdlfetffgpsmggfpgmnqtgfrtrrrstvtkgedLRYDIVLEFSESIFGAekefelshletcevctgtgakmgskmricstcggrgqvmrtdqtpfglfsqvsvcpscggegevISEYCRKCsgegrirlkknikvkvppgvstgSILRVvgegdagprggppgdlyvyldveeipgiqrdgidLFSTISISYLDAIMGTVVKVKTVEgiselqvppgtqpgdVLVLakkgapklnkpsirgdhlFTVKVTIPNRISAKERELLEELASLRNttgsrtrtrpktqaatttspeasqvgtvaekneepedqndpwkkLKDFAGSVANGALKWLKENL
Flexible Loop (DISEMBL)
mydqygeagvkstvgggssAYTTNPFDLFETFFGPSMGGfpgmnqtgfrtrrrstvtkgedlryDIVLEFSESIFGAEKEFELSHLETCEVCTgtgakmgskMRICSTCGGRGQVMRTDQTPFGLFSQVSVCPSCGGEGEVISEYCRKCSgegrirlkknikvkvppgvstGSILRVVGEGDAGPRGGPPGDLYVYLDVEEIPGIQRDGIDLFSTISISYLDAIMGTVVKVKTVEGIselqvppgtqpgDVLVLAKKGapklnkpsirgdhlftvkVTIPNRISAKERELLEELAslrnttgsrtrtrpktqaatttspeasqvgtvaekneepedqndpwkKLKDFAGSVANGALKWLKENL
Low Complexity Region (SEG)
MYDQYGEAGVKSTVGGGSSAYTTNPFDLFETffgpsmggfpgmNQTGFRTRRRSTVTKGEDLRYDIVLEFSESIFGAEKEFELSHLETCEVCTGTGAKMGSKMRICSTCGGRGQVMRTDQTPFGLFSQVSVCPSCGGEGEVISEYCRKCSGEGRIRLKKNIKVKVPPGVSTGSILRVVgegdagprggppgDLYVYLDVEEIPGIQRDGIDLFSTISISYLDAIMGTVVKVKTVEGISELQVPPGTQPGDVLVLAKKGAPKLNKPSIRGDHLFTVKVTIPNRIsakerelleelaslrNTTGSRTRTRPKTQAATTTSPEASQVGTVAEKNEEPEDQNDPWKKLKDFAGSVANGALKWLKENL
Disordered region (IsUnstruct)
*******************AYTTNPFDLFETFFGPSMGGFPGMNQTGFR****STVTKGEDLRYDIVLEFSESIFGAEKEFELSHLETCEVCTGTGAKMGSKMRICSTCGGRGQVMRTDQTPFGLFSQVSVCPSCGGEGEVISEYCRKCSGEGRIRLKKNIKVKVPPGVSTGSILRVVGEG********PGDLYVYLDVEEIPGIQRDGIDLFSTISISYLDAIMGTVVKVKTVEGISELQVP*****GDVLVLAK*********SIRGDHLFTVKVTIPNRI************************************************************************L*******
Disordered Region (DISOPRED)
MYDQYGEAGVK*********YTTNPFDLFETFFGPSM*************************RYDIVLEFSESIFGAEKEFELSHLETCEVCTGTGAKMGSKMRICSTCGGRGQVMRTDQTPFGLFSQVSVCPSCGGEGEVISEYCRKCSGEGRIRLKKNIKVKVPPGVSTGSILR**********GGPPGDLYVYLDVEEIPGIQRDGIDLFSTISISYLDAIMGTVVKVKTVEGISELQVPPGTQPGDVLVLAKKGAPKL*KPSIRGDHLFTVKVTIPNRISAKERELL************************************************PWKKLKDFAGSVANGALKWLKEN*
Disordered Region (DISEMBL)
*********VKSTVGGGSSAYTTNPFDLFETFFGPSMGGFPGMNQTGFRTRRRSTVTKGEDLRYDIVLEFSESIFGAEKEFELSHLETCEVCTGTGAKMGSKMRICSTCGGRGQVMRTDQTPFGLFSQVSVCPSCGGEGEVISEYCRKCSGEGRIRLKKNIKVKVPPGVSTGSILRVVGEGDAGPRGGPPGDLYVYLDVEEIPGIQRDGIDLFSTISISYLDAIMGTVVKVKTVEGISELQVPPGTQPGDVLVLAKKGAPKLNKPSIRGDHLFTVKVTIPNRISAKERELLEELASLRNT**************************************DPWKKLKDFAGSVANGALKWLKENL
Disordered Region (DISPRO)
MYDQYGEAGVKSTVGGGSSAYTTNPFDLFETFFGPSMGGFPGMNQTGFR***RS**TKGEDLRYDIVLEFSESIFGAEKEFELSHLETCEVCTGTG**MGSKMRICSTCGGRGQVMRTDQTPFGLFSQVSVCPSCGGEGEVISEYCRKCSGEGRIRLKKNIKVKVPPGVSTGSILRVVGEGDAGPRGGPPGDLYVYLDVEEIPGIQRDGIDLFSTISISYLDAIMGTVVKVKTVEGISELQVPPGTQPGDVLVLAKKGAPKLNKPSIRGDHLFTVKVTIPNRISAKERELLEELASLR***************************************NDPWKKLKDFAGSVANGALKWLKENL
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MYDQYGEAGVKSTVGGGSSAYTTNPFDLFETFFGPSMGGFPGMNQTGFRTRRRSTVTKGEDLRYDIVLEFSESIFGAEKEFELSHLETCEVCTGTGAKMGSKMRICSTCGGRGQVMRTDQTPFGLFSQVSVCPSCGGEGEVISEYCRKCSGEGRIRLKKNIKVKVPPGVSTGSILRVVGEGDAGPRGGPPGDLYVYLDVEEIPGIQRDGIDLFSTISISYLDAIMGTVVKVKTVEGISELQVPPGTQPGDVLVLAKKGAPKLNKPSIRGDHLFTVKVTIPNRISAKERELLEELASLRNTTGSRTRTRPKTQAATTTSPEASQVGTVAEKNEEPEDQNDPWKKLKDFAGSVANGALKWLKENL
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	363	2.2.26 [Sep-21-2011]
B7KEJ8	375	Chaperone protein DnaJ OS	yes	no	0.804	0.778	0.543	9e-85
Q8DKR7	373	Chaperone protein DnaJ OS	yes	no	0.785	0.764	0.524	1e-84
B0CAZ0	374	Chaperone protein DnaJ OS	yes	no	0.798	0.775	0.525	2e-84
B8HLD2	374	Chaperone protein DnaJ OS	yes	no	0.801	0.778	0.520	3e-83
B0JW23	374	Chaperone protein DnaJ OS	yes	no	0.812	0.788	0.516	6e-82
Q114R3	374	Chaperone protein DnaJ OS	yes	no	0.812	0.788	0.496	1e-79
Q2JW78	394	Chaperone protein DnaJ OS	yes	no	0.732	0.675	0.528	1e-77
Q7VEJ6	378	Chaperone protein DnaJ OS	yes	no	0.796	0.764	0.486	1e-76
Q5N0G1	376	Chaperone protein DnaJ OS	yes	no	0.680	0.656	0.550	5e-76
Q2JH49	394	Chaperone protein DnaJ OS	yes	no	0.732	0.675	0.514	1e-75

>sp|B7KEJ8|DNAJ_CYAP7 Chaperone protein DnaJ OS=Cyanothece sp. (strain PCC 7424) GN=dnaJ PE=3 SV=1

 Score =  313 bits (803), Expect = 9e-85,   Method: Compositional matrix adjust.
 Identities = 162/298 (54%), Positives = 198/298 (66%), Gaps = 6/298 (2%)

Query: 2   YDQYGEAGVKSTVGGGSSAYTTNPF-DLFETFFGPSMGGFPGMNQTGFRTRRRSTVTKGE 60
           YD++GEAGV S  G G          D+FET F     GF GM  TG  +RRR+   +G+
Sbjct: 64  YDRFGEAGVSSGAGSGFEYGDMGGIADIFETIFS----GFGGMG-TGTSSRRRTGPVRGD 118

Query: 61  DLRYDIVLEFSESIFGAEKEFELSHLETCEVCTGTGAKMGSKMRICSTCGGRGQVMRTDQ 120
           DLR D  L F E++FG EKE  + HLETC+VC G+GAK G+  R CSTC G GQV R  +
Sbjct: 119 DLRLDFKLNFREAVFGGEKEIRIRHLETCQVCEGSGAKPGTGSRTCSTCSGSGQVRRATR 178

Query: 121 TPFGLFSQVSVCPSCGGEGEVISEYCRKCSGEGRIRLKKNIKVKVPPGVSTGSILRVVGE 180
           TPFG F+QVSVCP+C G GEVI E C  C G GR +  K +K+ +P GV  G+ LRV  E
Sbjct: 179 TPFGTFAQVSVCPTCNGSGEVIEEKCEACGGSGRKQETKKLKITIPAGVDNGTRLRVSRE 238

Query: 181 GDAGPRGGPPGDLYVYLDVEEIPGIQRDGIDLFSTISISYLDAIMGTVVKVKTVEGISEL 240
           GDAG RGGPPGDLYVYL VE     QR+GID+ S ISISYL AI+G  + V TV+G  E+
Sbjct: 239 GDAGQRGGPPGDLYVYLSVETDEEFQREGIDIKSEISISYLQAILGCRLSVNTVDGPEEI 298

Query: 241 QVPPGTQPGDVLVLAKKGAPKLNKPSIRGDHLFTVKVTIPNRISAKERELLEELASLR 298
            + PGTQP  VL L  +G PKL  P  RGDHL T+ V+IP R++ +ERELLE+LA +R
Sbjct: 299 TIEPGTQPNTVLTLPNRGVPKLGNPVARGDHLITINVSIPTRVNPEERELLEKLAKIR 356

Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins.
Cyanothece sp. (strain PCC 7424) (taxid: 65393)

>sp|Q8DKR7|DNAJ_THEEB Chaperone protein DnaJ OS=Thermosynechococcus elongatus (strain BP-1) GN=dnaJ PE=3 SV=2

 Score =  313 bits (802), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 159/303 (52%), Positives = 204/303 (67%), Gaps = 18/303 (5%)

Query: 2   YDQYGEAGVKSTVGGGSSAYTTNPF----DLFETFFGPSMGGFPGMNQTGFRT--RRRST 55
           YD++GEAGV      G S +         D+FETFFG            GF T  RR+  
Sbjct: 64  YDRFGEAGVSGVGAAGFSDFGIGDMGGFADIFETFFG------------GFTTSSRRQQG 111

Query: 56  VTKGEDLRYDIVLEFSESIFGAEKEFELSHLETCEVCTGTGAKMGSKMRICSTCGGRGQV 115
            T+GEDLRYD+ LEF E++FG EKE  ++HLETC+ C GTGAK G++   CSTCGG GQV
Sbjct: 112 PTRGEDLRYDLKLEFREAVFGGEKEIRINHLETCKTCQGTGAKPGTRPVTCSTCGGVGQV 171

Query: 116 MRTDQTPFGLFSQVSVCPSCGGEGEVISEYCRKCSGEGRIRLKKNIKVKVPPGVSTGSIL 175
            R+ +TPFG F+Q++ CP+CGG G VI + C  C G+G I++ K +K+ +P GV  G+ L
Sbjct: 172 RRSARTPFGSFTQLTTCPTCGGSGVVIEDRCESCGGQGHIQVSKKLKITIPAGVDNGTRL 231

Query: 176 RVVGEGDAGPRGGPPGDLYVYLDVEEIPGIQRDGIDLFSTISISYLDAIMGTVVKVKTVE 235
           RV GEGDAG RGGPPGDLYVYL V+  P  QR+G ++ S I ISYL AI+G  + V TV+
Sbjct: 232 RVSGEGDAGLRGGPPGDLYVYLFVQPDPEFQREGNNILSRIKISYLQAILGCRISVSTVD 291

Query: 236 GISELQVPPGTQPGDVLVLAKKGAPKLNKPSIRGDHLFTVKVTIPNRISAKERELLEELA 295
           G +EL++P GTQPG VLVL  +G P++  P  RGDHL TV V IP  I+ +ERELLE+LA
Sbjct: 292 GEAELKIPAGTQPGTVLVLEGRGVPRVGNPVARGDHLITVDVEIPTHITHEERELLEKLA 351

Query: 296 SLR 298
            +R
Sbjct: 352 KIR 354

Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins.

Thermosynechococcus elongatus (strain BP-1) (taxid: 197221)

>sp|B0CAZ0|DNAJ_ACAM1 Chaperone protein DnaJ OS=Acaryochloris marina (strain MBIC 11017) GN=dnaJ PE=3 SV=1

 Score =  313 bits (801), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 157/299 (52%), Positives = 205/299 (68%), Gaps = 9/299 (3%)

Query: 2   YDQYGEAGVKSTVGGGSSAYTT--NPFDLFETFFGPSMGGFPGMNQTGFRTRRRSTVTKG 59
           YDQ+GEAGV S  G G   +       D+FETFF     GF G  Q+G   RRRS   +G
Sbjct: 64  YDQFGEAGVSSAAGAGYQDFGDFGGFADIFETFFS----GFGGSPQSG---RRRSGPARG 116

Query: 60  EDLRYDIVLEFSESIFGAEKEFELSHLETCEVCTGTGAKMGSKMRICSTCGGRGQVMRTD 119
           EDLR+D+ L+F E++FG E++  +SHLE+C+ C GTGAK G++ + CSTC G GQV R  
Sbjct: 117 EDLRFDLKLKFREAVFGGEQQIRISHLESCKTCEGTGAKPGTRPQTCSTCQGSGQVRRMT 176

Query: 120 QTPFGLFSQVSVCPSCGGEGEVISEYCRKCSGEGRIRLKKNIKVKVPPGVSTGSILRVVG 179
           +TP G F+QVSVCP+C G+G+V++E C  C G G+ ++ K +++K+P GV TG+ LRV  
Sbjct: 177 RTPLGNFTQVSVCPTCNGQGQVVTEKCDSCGGRGQNQVSKKLQIKIPAGVDTGTRLRVSN 236

Query: 180 EGDAGPRGGPPGDLYVYLDVEEIPGIQRDGIDLFSTISISYLDAIMGTVVKVKTVEGISE 239
           EGDAG +GGPPGDLYVYL V+E    +RDG ++ S   ISYL AI+G  + VKTV+G   
Sbjct: 237 EGDAGQKGGPPGDLYVYLFVQEDSEFRRDGTNVLSEFKISYLQAILGAQLPVKTVDGEET 296

Query: 240 LQVPPGTQPGDVLVLAKKGAPKLNKPSIRGDHLFTVKVTIPNRISAKERELLEELASLR 298
           + +P GTQPG VL L   G P+L  P  RGDHL TV + IPNRIS +ERELL +LAS+R
Sbjct: 297 ITIPAGTQPGTVLTLENHGVPRLGNPVSRGDHLITVIIDIPNRISTEERELLVQLASIR 355

Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins.

Acaryochloris marina (strain MBIC 11017) (taxid: 329726)

>sp|B8HLD2|DNAJ_CYAP4 Chaperone protein DnaJ OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) GN=dnaJ PE=3 SV=1

 Score =  309 bits (791), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 155/298 (52%), Positives = 203/298 (68%), Gaps = 7/298 (2%)

Query: 2   YDQYGEAGVKSTVGGGSSAYTTNPF-DLFETFFGPSMGGFPGMNQTGFRTRRRSTVTKGE 60
           YD++GEAGV     G         F D+FE+ F     GF G+      +RRR+  ++G+
Sbjct: 64  YDRFGEAGVSGAAAGYGDMGDMGGFADIFESIFS----GFGGVGAG--TSRRRTGPSRGD 117

Query: 61  DLRYDIVLEFSESIFGAEKEFELSHLETCEVCTGTGAKMGSKMRICSTCGGRGQVMRTDQ 120
           DLR+D+ LEF E+IFG EK+  ++HLETC  C G+GAK G+K R C TCGG GQV R  +
Sbjct: 118 DLRFDLKLEFREAIFGGEKQIRITHLETCTTCNGSGAKPGTKPRTCGTCGGAGQVRRATR 177

Query: 121 TPFGLFSQVSVCPSCGGEGEVISEYCRKCSGEGRIRLKKNIKVKVPPGVSTGSILRVVGE 180
           TPFG F+QVSVCP+C G+G+VI + C  C G G+ ++ K +K+ +P GV TG+ LRV  E
Sbjct: 178 TPFGSFTQVSVCPTCNGKGQVIEDKCETCGGNGQAQVTKKLKITIPAGVDTGTRLRVSNE 237

Query: 181 GDAGPRGGPPGDLYVYLDVEEIPGIQRDGIDLFSTISISYLDAIMGTVVKVKTVEGISEL 240
           GDAG +GGP GDLYVYL V+E P  +R+GI++ S + ISYL AI+G+ + V TV+G  EL
Sbjct: 238 GDAGQQGGPAGDLYVYLFVQEDPEFRREGINILSEVKISYLQAILGSRLMVNTVDGEVEL 297

Query: 241 QVPPGTQPGDVLVLAKKGAPKLNKPSIRGDHLFTVKVTIPNRISAKERELLEELASLR 298
            +PPGTQP  VL L   G P+L  P  RGDHL TV + IP RISA+ERELLE+LA +R
Sbjct: 298 TIPPGTQPNTVLTLENHGVPRLGNPVSRGDHLITVLLEIPTRISAEERELLEKLAKIR 355

Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins.

Cyanothece sp. (strain PCC 7425 / ATCC 29141) (taxid: 395961)

>sp|B0JW23|DNAJ_MICAN Chaperone protein DnaJ OS=Microcystis aeruginosa (strain NIES-843) GN=dnaJ PE=3 SV=1

 Score =  304 bits (779), Expect = 6e-82,   Method: Compositional matrix adjust.
 Identities = 155/300 (51%), Positives = 195/300 (65%), Gaps = 5/300 (1%)

Query: 2   YDQYGEAGVKSTVGGGSSAYTTNPFDLFETFFGPSMGGFPGMNQTGFRTRRRSTVTKGED 61
           YD++GEAGV     G          D+FET F     GF GM       RRR+  T+GED
Sbjct: 64  YDRFGEAGVSGGAAGFDPDNMGGFADIFETIFS----GFGGMGGQA-TARRRTGPTRGED 118

Query: 62  LRYDIVLEFSESIFGAEKEFELSHLETCEVCTGTGAKMGSKMRICSTCGGRGQVMRTDQT 121
           LR D  L+F E++FG EKE  + HLETC+ C G+GA+ G+  R C+TC G GQV R  +T
Sbjct: 119 LRLDFRLKFREAVFGGEKEIRIRHLETCQTCKGSGARPGTSSRTCTTCSGTGQVRRATRT 178

Query: 122 PFGLFSQVSVCPSCGGEGEVISEYCRKCSGEGRIRLKKNIKVKVPPGVSTGSILRVVGEG 181
           PFG F+QVSVCP+C G GEVI E C  C G GR +  K +K+ +P GV  G  LRV  EG
Sbjct: 179 PFGTFAQVSVCPTCDGAGEVIEEKCDVCGGSGRRQETKKLKITIPAGVDNGMKLRVAREG 238

Query: 182 DAGPRGGPPGDLYVYLDVEEIPGIQRDGIDLFSTISISYLDAIMGTVVKVKTVEGISELQ 241
           DAG +GGPPGDL+VYL VE     QR+G D+ S I+ISY+ AI+G  +KV TV+G  +L 
Sbjct: 239 DAGLKGGPPGDLFVYLTVETDAEFQREGNDIKSDITISYIQAILGCTIKVNTVDGQEDLT 298

Query: 242 VPPGTQPGDVLVLAKKGAPKLNKPSIRGDHLFTVKVTIPNRISAKERELLEELASLRNTT 301
           +P GTQP  VL+L  KG PKL  P  RGDH  TVK++IP R++ +ERELLE+LA +R  T
Sbjct: 299 IPAGTQPNTVLILENKGVPKLGNPVSRGDHRITVKISIPTRVTGEERELLEKLAKVRGET 358

Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins.

Microcystis aeruginosa (strain NIES-843) (taxid: 449447)

>sp|Q114R3|DNAJ_TRIEI Chaperone protein DnaJ OS=Trichodesmium erythraeum (strain IMS101) GN=dnaJ PE=3 SV=1

 Score =  297 bits (760), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 151/304 (49%), Positives = 199/304 (65%), Gaps = 9/304 (2%)

Query: 2   YDQYGEAGVKSTVGGGSSAYTTNPFDLFETFFGPSMGGFPGMNQTGFRTRRRSTVTKGED 61
           +D++GEAGV    GG +S ++T+  D F   F     GF G    G   RRR+   +G+D
Sbjct: 64  FDRFGEAGVS---GGAASGFSTDFSDSFADIFESFFSGFGGAGTQG---RRRTGPVRGDD 117

Query: 62  LRYDIVLEFSESIFGAEKEFELSHLETCEVCTGTGAKMGSKMRICSTCGGRGQVMRTDQT 121
           LR D+ LEF E+IFG +KE  + HLETC  C G+GAK G+K + CSTCGG GQV R  +T
Sbjct: 118 LRLDLNLEFIEAIFGGDKELTIKHLETCGTCNGSGAKPGTKPQTCSTCGGTGQVRRATRT 177

Query: 122 PFGLFSQVSVCPSCGGEGEVISEYCRKCSGEGRIRLKKNIKVKVPPGVSTGSILRVVGEG 181
           PF  F+QVSVCPSC G G++I E C  C G G+    K IK+ +P GV  G+ LRV  EG
Sbjct: 178 PFSSFTQVSVCPSCNGSGQIIEEKCVDCGGRGQKEATKKIKITIPGGVDNGTRLRVSNEG 237

Query: 182 DAGPRGGPPGDLYVYLDVEEIPGIQRDGIDLFSTISISYLDAIMGTVVKVKTVEGISELQ 241
           DAG  GGPPGDLYV+L V+  P  QRDGI++ S I ISYL AI+G  +++ TV+G +EL 
Sbjct: 238 DAGRMGGPPGDLYVFLSVKNHPEFQRDGINIISQIKISYLQAILGCCLEINTVDGKTELT 297

Query: 242 VPPGTQPGDVLVLAKKGAPKLNKPSIRGDHLFTVKVTIPNRISAKERELLEELASLRNTT 301
           +P GTQP  +L L  KG P+L     RG HL T+++ IP +I+ +E+ELLE+LA ++   
Sbjct: 298 IPSGTQPNAILTLEDKGVPRLGNSVSRGAHLITIEIDIPTKITPEEKELLEKLAKIK--- 354

Query: 302 GSRT 305
           G RT
Sbjct: 355 GERT 358

Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins.

Trichodesmium erythraeum (strain IMS101) (taxid: 203124)

>sp|Q2JW78|DNAJ_SYNJA Chaperone protein DnaJ OS=Synechococcus sp. (strain JA-3-3Ab) GN=dnaJ PE=3 SV=1

 Score =  290 bits (743), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 147/278 (52%), Positives = 187/278 (67%), Gaps = 12/278 (4%)

Query: 27  DLFETFFGPSMGGFPGMNQTGFRTRRRSTVTKGEDLRYDIVLEFSESIFGAEKEFELSHL 86
           DLFE+FF    GG  G       +R R    +G+DLR+D+ LEF E+IFG EK+  +SHL
Sbjct: 93  DLFESFFTNFAGGGVGY------SRSRQGPVRGDDLRFDLKLEFLEAIFGGEKQIRISHL 146

Query: 87  ETCEVCTGTGAKMGSKMRICSTCGGRGQVMRTDQTPFGLFSQVSVCPSCGGEGEVISEYC 146
           E C VC G+GAK G+ +++C TCGG GQV R  +TPFG F+QVS+CP+CGG G V+ E C
Sbjct: 147 EVCPVCGGSGAKPGTDVKVCPTCGGAGQVRRATRTPFGNFTQVSICPTCGGAGRVLEEPC 206

Query: 147 RKCSGEGRIRLKKNIKVKVPPGVSTGSILRVVGEGDAGPRGGPPGDLYVYLDVEEIPGIQ 206
             C+GEG  +  K +++ +P GV +G+ LRV GEGDAG RGGPPGDLYVYL VE  P  Q
Sbjct: 207 YNCNGEGLAQTTKKLRINIPAGVDSGTRLRVSGEGDAGRRGGPPGDLYVYLFVEPDPDFQ 266

Query: 207 RDGIDLFSTISISYLDAIMGTVVKVKTV------EGISELQVPPGTQPGDVLVLAKKGAP 260
           RDG+ +FS + +SYL AI+G  V V TV      E  +EL +P G+QPG VL L  KG P
Sbjct: 267 RDGLTIFSQVRVSYLQAILGAKVLVPTVDSKAGLEEEAELTIPAGSQPGTVLTLEGKGVP 326

Query: 261 KLNKPSIRGDHLFTVKVTIPNRISAKERELLEELASLR 298
           +L  P +RGDH  T+ V IP RIS++ERELL  LA L 
Sbjct: 327 RLGNPMLRGDHKITLVVEIPTRISSEERELLMRLAELH 364

Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins.

Synechococcus sp. (strain JA-3-3Ab) (taxid: 321327)

>sp|Q7VEJ6|DNAJ_PROMA Chaperone protein DnaJ OS=Prochlorococcus marinus (strain SARG / CCMP1375 / SS120) GN=dnaJ PE=3 SV=1

 Score =  287 bits (734), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 143/294 (48%), Positives = 204/294 (69%), Gaps = 5/294 (1%)

Query: 2   YDQYGEAGVKSTVGGGSSAYTTNPFDLFETFFGPSMGGFPGMNQTGFRTRRRSTVTKGED 61
           YDQ+GEAG+  + G           D+FETFF    G       +G RT+RR    +G+D
Sbjct: 63  YDQFGEAGLGGSAGMPDMGDMGGFADIFETFFSGFGG----PGSSGARTQRRGP-QQGDD 117

Query: 62  LRYDIVLEFSESIFGAEKEFELSHLETCEVCTGTGAKMGSKMRICSTCGGRGQVMRTDQT 121
           LRYD+ ++F++++FG E+E ++ HLETC+VC GTGAK G+    CSTCGG GQV R  +T
Sbjct: 118 LRYDLTIDFNQAVFGQEREIKIPHLETCDVCRGTGAKPGTGPTTCSTCGGAGQVRRATRT 177

Query: 122 PFGLFSQVSVCPSCGGEGEVISEYCRKCSGEGRIRLKKNIKVKVPPGVSTGSILRVVGEG 181
           PFG F+QVS CP+C G G+VIS+ C+ C G+G  +++K +++ +P GV TG+ LRV GEG
Sbjct: 178 PFGSFTQVSDCPTCSGSGQVISDSCQSCGGQGVKQVRKKLRINIPAGVDTGTRLRVSGEG 237

Query: 182 DAGPRGGPPGDLYVYLDVEEIPGIQRDGIDLFSTISISYLDAIMGTVVKVKTVEGISELQ 241
           +AGPRGGP GDLYV+L V+    ++RDG+++ S +++SYL AI+G  ++V TV+G + LQ
Sbjct: 238 NAGPRGGPSGDLYVFLKVKSHARLKRDGLNIHSEVNVSYLQAILGDTIEVDTVDGPTTLQ 297

Query: 242 VPPGTQPGDVLVLAKKGAPKLNKPSIRGDHLFTVKVTIPNRISAKERELLEELA 295
           +P GTQP  VL+L  KG PKL  P  RG+H  +V + IP+R++  E+ LLE+LA
Sbjct: 298 IPSGTQPSAVLILDNKGIPKLGNPVARGNHCISVNIKIPSRLTDDEKILLEKLA 351

Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins.

Prochlorococcus marinus (strain SARG / CCMP1375 / SS120) (taxid: 167539)

>sp|Q5N0G1|DNAJ_SYNP6 Chaperone protein DnaJ OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=dnaJ PE=3 SV=1

 Score =  285 bits (728), Expect = 5e-76,   Method: Compositional matrix adjust.
 Identities = 136/247 (55%), Positives = 180/247 (72%)

Query: 52  RRSTVTKGEDLRYDIVLEFSESIFGAEKEFELSHLETCEVCTGTGAKMGSKMRICSTCGG 111
           RR   T+GEDLR D+ L+F ++IFG EKE  ++H ETC  C G+GAK G++ + C+TCGG
Sbjct: 111 RRRGPTRGEDLRLDLKLDFRDAIFGGEKEIRVTHEETCGTCQGSGAKAGTRPQTCTTCGG 170

Query: 112 RGQVMRTDQTPFGLFSQVSVCPSCGGEGEVISEYCRKCSGEGRIRLKKNIKVKVPPGVST 171
            GQV R  +TPFG F+QVSVCP+C G G++I + C  C G GR+R  K +K+ +P GV +
Sbjct: 171 AGQVRRATRTPFGSFTQVSVCPTCEGSGQMIVDKCDDCGGAGRLRRPKKLKINIPAGVDS 230

Query: 172 GSILRVVGEGDAGPRGGPPGDLYVYLDVEEIPGIQRDGIDLFSTISISYLDAIMGTVVKV 231
           G+ LRV  EGDAG RGGPPGDLYVYL V E    +R+GI+LFST++ISYL AI+G  ++V
Sbjct: 231 GTRLRVANEGDAGLRGGPPGDLYVYLFVSEDTQFRREGINLFSTVTISYLQAILGCSLEV 290

Query: 232 KTVEGISELQVPPGTQPGDVLVLAKKGAPKLNKPSIRGDHLFTVKVTIPNRISAKERELL 291
            TV+G +EL +PPGTQP  VL +  KG P+L  P  RG+ L T+KV IP +ISA+ERELL
Sbjct: 291 ATVDGPTELIIPPGTQPNAVLTVEGKGVPRLGNPVARGNLLVTIKVEIPTKISAEERELL 350

Query: 292 EELASLR 298
           E++  +R
Sbjct: 351 EKVVQIR 357

Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins.

Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) (taxid: 269084)

>sp|Q2JH49|DNAJ_SYNJB Chaperone protein DnaJ OS=Synechococcus sp. (strain JA-2-3B'a(2-13)) GN=dnaJ PE=3 SV=1

 Score =  283 bits (725), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 143/278 (51%), Positives = 187/278 (67%), Gaps = 12/278 (4%)

Query: 27  DLFETFFGPSMGGFPGMNQTGFRTRRRSTVTKGEDLRYDIVLEFSESIFGAEKEFELSHL 86
           D+FE+FF      F G   +  R+R+     +G+DLR+D+ LEF E+IFG EK+  +SHL
Sbjct: 93  DIFESFFT----NFAGAGASYARSRQ--GPVRGDDLRFDLKLEFLEAIFGGEKQIRISHL 146

Query: 87  ETCEVCTGTGAKMGSKMRICSTCGGRGQVMRTDQTPFGLFSQVSVCPSCGGEGEVISEYC 146
           E C VC G+GAK G++++ C TCGG GQV R  +TPFG F+QVSVCP+CGG G+V+ E C
Sbjct: 147 EVCNVCGGSGAKPGTEVKTCPTCGGSGQVRRATRTPFGNFTQVSVCPTCGGSGQVLEEPC 206

Query: 147 RKCSGEGRIRLKKNIKVKVPPGVSTGSILRVVGEGDAGPRGGPPGDLYVYLDVEEIPGIQ 206
             C+GEG  +  K +++ +P GV +G+ LRV GEGDAG RGGPPGDLYVYL VE  P  Q
Sbjct: 207 YNCNGEGLAQTTKKLRINIPAGVDSGTRLRVSGEGDAGRRGGPPGDLYVYLFVEPDPDFQ 266

Query: 207 RDGIDLFSTISISYLDAIMGTVVKVKTVEGIS------ELQVPPGTQPGDVLVLAKKGAP 260
           RDG+ + S + +SYL AI+G  V V TV+  +      EL +P G+QPG VL L  KG P
Sbjct: 267 RDGLTILSEVRVSYLQAILGAKVSVPTVDSKAGLEEEVELTIPAGSQPGTVLTLEGKGVP 326

Query: 261 KLNKPSIRGDHLFTVKVTIPNRISAKERELLEELASLR 298
           ++  P  RGDH  T+ V IP RIS++ERELL  LA L 
Sbjct: 327 RIGNPMSRGDHQITLVVEIPTRISSEERELLMRLAELH 364

Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins.

Synechococcus sp. (strain JA-2-3B'a(2-13)) (taxid: 321332)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	363
224134931	492	predicted protein [Populus trichocarpa]	1.0	0.737	0.837	1e-178
359482375	489	PREDICTED: chaperone protein DnaJ-like [	0.994	0.738	0.815	1e-174
356554947	489	PREDICTED: chaperone protein DnaJ-like i	0.997	0.740	0.808	1e-172
356554945	493	PREDICTED: chaperone protein DnaJ-like i	0.997	0.734	0.807	1e-171
255553237	511	chaperone protein DNAj, putative [Ricinu	0.994	0.706	0.834	1e-171
1707657	498	DnaJ homologue [Pisum sativum]	0.997	0.726	0.791	1e-166
357455281	496	Chaperone protein dnaJ [Medicago truncat	0.997	0.729	0.777	1e-165
449468934	505	PREDICTED: chaperone protein DnaJ-like [	0.997	0.716	0.820	1e-164
297839937	492	hypothetical protein ARALYDRAFT_895995 [	1.0	0.737	0.765	1e-160
18412605	500	molecular chaperone Hsp40/DnaJ-like prot	0.994	0.722	0.747	1e-160

>gi|224134931|ref|XP_002327525.1| predicted protein [Populus trichocarpa] gi|222836079|gb|EEE74500.1| predicted protein [Populus trichocarpa]

 Score =  629 bits (1623), Expect = e-178,   Method: Compositional matrix adjust.
 Identities = 305/364 (83%), Positives = 330/364 (90%), Gaps = 1/364 (0%)

Query: 1   MYDQYGEAGVKSTVGGGSSAYTTNPFDLFETFFGPSMGGFPGMNQTGFRTRRRSTVTKGE 60
           +YDQYGEAGVKSTVGG SSAYTTNPFDLFETFFG SMGGFPGM QTGF+TRRRSTVTKGE
Sbjct: 129 LYDQYGEAGVKSTVGGPSSAYTTNPFDLFETFFGASMGGFPGMEQTGFKTRRRSTVTKGE 188

Query: 61  DLRYDIVLEFSESIFGAEKEFELSHLETCEVCTGTGAKMGSKMRICSTCGGRGQVMRTDQ 120
           D+RYDI LEFSE+IFGAEKEFELSHLETCEVC GTGAKMGSKMRICSTCGGRGQVMRT+Q
Sbjct: 189 DIRYDISLEFSEAIFGAEKEFELSHLETCEVCAGTGAKMGSKMRICSTCGGRGQVMRTEQ 248

Query: 121 TPFGLFSQVSVCPSCGGEGEVISEYCRKCSGEGRIRLKKNIKVKVPPGVSTGSILRVVGE 180
           TPFGLFSQVSVCP+CGG+GEVISEYCRKCSGEGRIR+KKNIKVKVPPGV  GSILRV  E
Sbjct: 249 TPFGLFSQVSVCPNCGGDGEVISEYCRKCSGEGRIRVKKNIKVKVPPGVGAGSILRVARE 308

Query: 181 GDAGPRGGPPGDLYVYLDVEEIPGIQRDGIDLFSTISISYLDAIMGTVVKVKTVEGISEL 240
           GDAGPRGGP GDLYVYLDVEEI GIQRDGI+L STISISY DAI+GTVVKVKTVEG+SEL
Sbjct: 309 GDAGPRGGPLGDLYVYLDVEEIRGIQRDGINLTSTISISYADAILGTVVKVKTVEGMSEL 368

Query: 241 QVPPGTQPGDVLVLAKKGAPKLNKPSIRGDHLFTVKVTIPNRISAKERELLEELASLRNT 300
           Q+PPGTQPGDVLVLAKKGAPKLNKPSIRGDHLFT+KVTIP R+SAKERELLEELASL + 
Sbjct: 369 QIPPGTQPGDVLVLAKKGAPKLNKPSIRGDHLFTIKVTIPKRVSAKERELLEELASLSDK 428

Query: 301 TGSRTRTRPKT-QAATTTSPEASQVGTVAEKNEEPEDQNDPWKKLKDFAGSVANGALKWL 359
             SR+RT+P + Q    +  +  +V TV+E  EE  DQNDPW+KLKDFAGS+ NGALKWL
Sbjct: 429 NISRSRTQPASKQLFAISRDQEREVETVSETTEESRDQNDPWQKLKDFAGSLTNGALKWL 488

Query: 360 KENL 363
           K+NL
Sbjct: 489 KDNL 492

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359482375|ref|XP_002265060.2| PREDICTED: chaperone protein DnaJ-like [Vitis vinifera] gi|297743480|emb|CBI36347.3| unnamed protein product [Vitis vinifera]

 Score =  618 bits (1594), Expect = e-174,   Method: Compositional matrix adjust.
 Identities = 296/363 (81%), Positives = 328/363 (90%), Gaps = 2/363 (0%)

Query: 1   MYDQYGEAGVKSTVGGGSSAYTTNPFDLFETFFGPSMGGFPGMNQTGFRTRRRSTVTKGE 60
           +YDQ+GEAGVKS VGG + AYTTNPFDLFETFFGPSMGGF GM+Q GFRTRRR+TV+KGE
Sbjct: 129 LYDQFGEAGVKSGVGGQAGAYTTNPFDLFETFFGPSMGGFSGMDQAGFRTRRRTTVSKGE 188

Query: 61  DLRYDIVLEFSESIFGAEKEFELSHLETCEVCTGTGAKMGSKMRICSTCGGRGQVMRTDQ 120
           D+RYD+ L+FSE+IFGAEKEFELSHLETCEVCTGTGAK+GSKMRICSTCGGRGQVMRT+Q
Sbjct: 189 DIRYDMTLKFSEAIFGAEKEFELSHLETCEVCTGTGAKIGSKMRICSTCGGRGQVMRTEQ 248

Query: 121 TPFGLFSQVSVCPSCGGEGEVISEYCRKCSGEGRIRLKKNIKVKVPPGVSTGSILRVVGE 180
           TPFGLFSQVSVCP+CGG+GEVISEYCRKCSGEGRIR+KK+IKVKVPPGVS GSILRV GE
Sbjct: 249 TPFGLFSQVSVCPTCGGDGEVISEYCRKCSGEGRIRVKKDIKVKVPPGVSKGSILRVAGE 308

Query: 181 GDAGPRGGPPGDLYVYLDVEEIPGIQRDGIDLFSTISISYLDAIMGTVVKVKTVEGISEL 240
           GDAG RGGPPGDL+VYLDVEEIP IQRDGI+L ST+++SYLDAI+G VVKVKTVEG++EL
Sbjct: 309 GDAGLRGGPPGDLFVYLDVEEIPEIQRDGINLCSTVTVSYLDAILGAVVKVKTVEGVTEL 368

Query: 241 QVPPGTQPGDVLVLAKKGAPKLNKPSIRGDHLFTVKVTIPNRISAKERELLEELASLRNT 300
           Q+P GTQPGDVLVLAKKGAPKLN+P+IRGDHLFTVKVTIPNRISAKERELLEELA L N 
Sbjct: 369 QIPSGTQPGDVLVLAKKGAPKLNRPTIRGDHLFTVKVTIPNRISAKERELLEELAFLSNN 428

Query: 301 TGSRTRTRPKTQAATTTSPEASQVGTVAEKNEEPEDQNDPWKKLKDFAGSVANGALKWLK 360
           T SR+RTRPK Q AT +    SQ   V EK E+  D ND WKKLKDFAGSVA+GAL WLK
Sbjct: 429 TSSRSRTRPKAQPATKS--RESQKDAVTEKTEDAGDDNDVWKKLKDFAGSVASGALNWLK 486

Query: 361 ENL 363
           +N 
Sbjct: 487 DNF 489

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356554947|ref|XP_003545802.1| PREDICTED: chaperone protein DnaJ-like isoform 2 [Glycine max]

 Score =  609 bits (1570), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 295/365 (80%), Positives = 327/365 (89%), Gaps = 3/365 (0%)

Query: 1   MYDQYGEAGVKSTVGGGSSAYTTNPFDLFETFFGPSMGGFPGMNQTGFRTRRRSTVTKGE 60
           +YDQYGEAGVKS VGGGSSAYTTNPFDLFETFFGPSMGGF GM+ TGF TRRRSTVTKGE
Sbjct: 126 LYDQYGEAGVKSAVGGGSSAYTTNPFDLFETFFGPSMGGFGGMDPTGFGTRRRSTVTKGE 185

Query: 61  DLRYDIVLEFSESIFGAEKEFELSHLETCEVCTGTGAKMGSKMRICSTCGGRGQVMRTDQ 120
           D+RY+  LEFSE+IFG EKEFELSHLETCEVCTGTGAK+GSKMR+CSTCGGRGQVMRT+Q
Sbjct: 186 DIRYNFSLEFSEAIFGKEKEFELSHLETCEVCTGTGAKIGSKMRVCSTCGGRGQVMRTEQ 245

Query: 121 TPFGLFSQVSVCPSCGGEGEVISEYCRKCSGEGRIRLKKNIKVKVPPGVSTGSILRVVGE 180
           TPFGLFSQVSVCP+CGG+GEVISEYCRKC+GEGRIR+KKNIKVKVPPGVS+GSILRV GE
Sbjct: 246 TPFGLFSQVSVCPNCGGDGEVISEYCRKCNGEGRIRVKKNIKVKVPPGVSSGSILRVTGE 305

Query: 181 GDAGPRGGPPGDLYVYLDVEEIPGIQRDGIDLFSTISISYLDAIMGTVVKVKTVEGISEL 240
           GDAGPRGGPPGDLYVYLDV+EIPGIQRD I+L S +SISYLDAI G VVKVKTVEGISEL
Sbjct: 306 GDAGPRGGPPGDLYVYLDVQEIPGIQRDDINLVSMLSISYLDAIRGAVVKVKTVEGISEL 365

Query: 241 QVPPGTQPGDVLVLAKKGAPKLNKPSIRGDHLFTVKVTIPNRISAKERELLEELASLRNT 300
           Q+P GTQPGDVLVLA+KG PKLNKPSIRGDHLFTVKVTIP RIS KEREL+EELA+L + 
Sbjct: 366 QIPAGTQPGDVLVLARKGVPKLNKPSIRGDHLFTVKVTIPKRISTKERELIEELATLGDA 425

Query: 301 TGSRTRTRPKTQA--ATTTSPEASQVGTVAEKNEEPEDQNDPWKKLKDFAGSVANGALKW 358
           +  R+++RP+T +  + T   + S   TV EK E+ ED+ND W KLKDFAGSVANGALKW
Sbjct: 426 S-RRSKSRPRTHSSGSPTAQKDESPTATVEEKTEKSEDENDVWNKLKDFAGSVANGALKW 484

Query: 359 LKENL 363
            K+NL
Sbjct: 485 FKDNL 489

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356554945|ref|XP_003545801.1| PREDICTED: chaperone protein DnaJ-like isoform 1 [Glycine max]

 Score =  608 bits (1568), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 298/369 (80%), Positives = 329/369 (89%), Gaps = 7/369 (1%)

Query: 1   MYDQYGEAGVKSTVGGGSSAYTTNPFDLFETFFGPSMGGFPGMNQTGFRTRRRSTVTKGE 60
           +YDQYGEAGVKS VGGGSSAYTTNPFDLFETFFGPSMGGF GM+ TGF TRRRSTVTKGE
Sbjct: 126 LYDQYGEAGVKSAVGGGSSAYTTNPFDLFETFFGPSMGGFGGMDPTGFGTRRRSTVTKGE 185

Query: 61  DLRYDIVLEFSESIFGAEKEFELSHLETCEVCTGTGAKMGSKMRICSTCGGRGQVMRTDQ 120
           D+RY+  LEFSE+IFG EKEFELSHLETCEVCTGTGAK+GSKMR+CSTCGGRGQVMRT+Q
Sbjct: 186 DIRYNFSLEFSEAIFGKEKEFELSHLETCEVCTGTGAKIGSKMRVCSTCGGRGQVMRTEQ 245

Query: 121 TPFGLFSQVSVCPSCGGEGEVISEYCRKCSGEGRIRLKKNIKVKVPPGVSTGSILRVVGE 180
           TPFGLFSQVSVCP+CGG+GEVISEYCRKC+GEGRIR+KKNIKVKVPPGVS+GSILRV GE
Sbjct: 246 TPFGLFSQVSVCPNCGGDGEVISEYCRKCNGEGRIRVKKNIKVKVPPGVSSGSILRVTGE 305

Query: 181 GDAGPRGGPPGDLYVYLDVEEIPGIQRDGIDLFSTISISYLDAIMGTVVKVKTVEGISEL 240
           GDAGPRGGPPGDLYVYLDV+EIPGIQRD I+L S +SISYLDAI G VVKVKTVEGISEL
Sbjct: 306 GDAGPRGGPPGDLYVYLDVQEIPGIQRDDINLVSMLSISYLDAIRGAVVKVKTVEGISEL 365

Query: 241 QVPPGTQPGDVLVLAKKGAPKLNKPSIRGDHLFTVKVTIPNRISAKERELLEELASLRNT 300
           Q+P GTQPGDVLVLA+KG PKLNKPSIRGDHLFTVKVTIP RIS KEREL+EELA+L + 
Sbjct: 366 QIPAGTQPGDVLVLARKGVPKLNKPSIRGDHLFTVKVTIPKRISTKERELIEELATLGDA 425

Query: 301 TGSRTRTRPKTQAA--TTTSPEA----SQVGTVAEKNEEPEDQNDPWKKLKDFAGSVANG 354
           +  R+++RP+T ++   T SP A    S   TV EK E+ ED+ND W KLKDFAGSVANG
Sbjct: 426 S-RRSKSRPRTHSSGGGTESPTAQKDESPTATVEEKTEKSEDENDVWNKLKDFAGSVANG 484

Query: 355 ALKWLKENL 363
           ALKW K+NL
Sbjct: 485 ALKWFKDNL 493

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255553237|ref|XP_002517661.1| chaperone protein DNAj, putative [Ricinus communis] gi|223543293|gb|EEF44825.1| chaperone protein DNAj, putative [Ricinus communis]

 Score =  608 bits (1568), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 303/363 (83%), Positives = 333/363 (91%), Gaps = 2/363 (0%)

Query: 1   MYDQYGEAGVKSTVGGGSSAYTTNPFDLFETFFGPSMGGFPGMNQTGFRTRRRSTVTKGE 60
           MYD+YGEAGVKS VGG SSAYTTNPFDLFETFFG SMGGFPG+ +TGF TRRRSTVTKGE
Sbjct: 151 MYDRYGEAGVKSAVGGASSAYTTNPFDLFETFFGSSMGGFPGV-ETGFGTRRRSTVTKGE 209

Query: 61  DLRYDIVLEFSESIFGAEKEFELSHLETCEVCTGTGAKMGSKMRICSTCGGRGQVMRTDQ 120
           DLRYDI LEFSE+IFGAEKEF+LSHLETCEVCTGTGAK+GSKMRICSTCGGRGQVMRT+Q
Sbjct: 210 DLRYDITLEFSEAIFGAEKEFDLSHLETCEVCTGTGAKIGSKMRICSTCGGRGQVMRTEQ 269

Query: 121 TPFGLFSQVSVCPSCGGEGEVISEYCRKCSGEGRIRLKKNIKVKVPPGVSTGSILRVVGE 180
           TPFGLFSQVSVCP+CGGEGEVISEYCRKCSGEGRIR++KNIKVKVPPGVSTGSILRV GE
Sbjct: 270 TPFGLFSQVSVCPTCGGEGEVISEYCRKCSGEGRIRVRKNIKVKVPPGVSTGSILRVAGE 329

Query: 181 GDAGPRGGPPGDLYVYLDVEEIPGIQRDGIDLFSTISISYLDAIMGTVVKVKTVEGISEL 240
           GDAGPRGGPPGDL+VYLDV+EI GIQRDGI+L STI+ISYLDAI+G VVKVKTVEG+S+L
Sbjct: 330 GDAGPRGGPPGDLFVYLDVQEISGIQRDGINLNSTITISYLDAILGAVVKVKTVEGMSDL 389

Query: 241 QVPPGTQPGDVLVLAKKGAPKLNKPSIRGDHLFTVKVTIPNRISAKERELLEELASLRNT 300
           Q+  GTQPGDVLVLAKKGAPKLNKPSIRGDHLFT+KVTIP+R SAKERELLEELASL NT
Sbjct: 390 QILAGTQPGDVLVLAKKGAPKLNKPSIRGDHLFTIKVTIPSRTSAKERELLEELASLSNT 449

Query: 301 TGSRTRTRPKTQAATTTSPEASQVGTVAEKNEEPEDQNDPWKKLKDFAGSVANGALKWLK 360
           T S++RTR KT  A + S E+  V TV EK+EE   +ND W+K+KD AGSVANGA+KWLK
Sbjct: 450 TSSQSRTRTKTPPA-SRSRESPPVETVEEKSEESGKENDLWQKVKDLAGSVANGAMKWLK 508

Query: 361 ENL 363
           +NL
Sbjct: 509 DNL 511

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|1707657|emb|CAA96305.1| DnaJ homologue [Pisum sativum]

 Score =  591 bits (1523), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 293/370 (79%), Positives = 328/370 (88%), Gaps = 8/370 (2%)

Query: 1   MYDQYGEAGVKSTVGGGSSAYTTNPFDLFETFFGPSMGGFPGMNQTGFRTRRRSTVTKGE 60
           +YDQYGEAGVKS+VGGGSSAY TNPFDLFETFFG +MGGF GM+ TGF TRRRSTVTKGE
Sbjct: 130 LYDQYGEAGVKSSVGGGSSAYATNPFDLFETFFGSNMGGFGGMDPTGFGTRRRSTVTKGE 189

Query: 61  DLRYDIVLEFSESIFGAEKEFELSHLETCEVCTGTGAKMGSKMRICSTCGGRGQVMRTDQ 120
           D+RYD  LEFSE+IFGAEKEFEL HLETCEVCTGTGAK+GSKMR+CSTCGGRGQVMRT+Q
Sbjct: 190 DIRYDFSLEFSEAIFGAEKEFELFHLETCEVCTGTGAKLGSKMRVCSTCGGRGQVMRTEQ 249

Query: 121 TPFGLFSQVSVCPSCGGEGEVISEYCRKCSGEGRIRLKKNIKVKVPPGVSTGSILRVVGE 180
           TPFGLFSQVSVCP+CGG+GEVISE CRKCSG GRIR+KKN+KVKVPPGVS+GSILRV GE
Sbjct: 250 TPFGLFSQVSVCPNCGGDGEVISENCRKCSGAGRIRVKKNMKVKVPPGVSSGSILRVTGE 309

Query: 181 GDAGPRGGPPGDLYVYLDVEEIPGIQRDGIDLFSTISISYLDAIMGTVVKVKTVEGISEL 240
           GDAGPRGGPPGDLYVYLDV EIPGIQRD I+L STISI+YLDAI+G+VVKVKTVEG SEL
Sbjct: 310 GDAGPRGGPPGDLYVYLDVLEIPGIQRDDINLRSTISITYLDAILGSVVKVKTVEGTSEL 369

Query: 241 QVPPGTQPGDVLVLAKKGAPKLNKPSIRGDHLFTVKVTIPNRISAKERELLEELASLRNT 300
           Q+P GTQPGDVLVLAKKG PKLN+PSIRGDHLFTVKVTIP RIS+KERE+LEELASL  T
Sbjct: 370 QIPSGTQPGDVLVLAKKGVPKLNRPSIRGDHLFTVKVTIPKRISSKEREVLEELASLGGT 429

Query: 301 TGSRTRTRPKTQAATTT--SPEA----SQVGTVAEKNEEPEDQNDP-WKKLKDFAGSVAN 353
           + S +R+RP+TQ +T +  +P A    S   TV EK E+ E+++D  W KLK+ AGSVAN
Sbjct: 430 S-SHSRSRPRTQPSTGSKEAPAAQRAESPTETVTEKPEKSEEEDDDLWNKLKNMAGSVAN 488

Query: 354 GALKWLKENL 363
           GALKW K+NL
Sbjct: 489 GALKWFKDNL 498

Source: Pisum sativum

Species: Pisum sativum

Genus: Pisum

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357455281|ref|XP_003597921.1| Chaperone protein dnaJ [Medicago truncatula] gi|355486969|gb|AES68172.1| Chaperone protein dnaJ [Medicago truncatula]

 Score =  588 bits (1515), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 287/369 (77%), Positives = 324/369 (87%), Gaps = 7/369 (1%)

Query: 1   MYDQYGEAGVKSTVGGGSSAYTTNPFDLFETFFGPSMGGFPGMNQTGFRTRRRSTVTKGE 60
           +YDQYGEAGVKS+VGGGSSAY TNPFDLFETFFGP+MGGF  M+ +GF TRRRSTVTKGE
Sbjct: 129 LYDQYGEAGVKSSVGGGSSAYATNPFDLFETFFGPNMGGFSTMDPSGFGTRRRSTVTKGE 188

Query: 61  DLRYDIVLEFSESIFGAEKEFELSHLETCEVCTGTGAKMGSKMRICSTCGGRGQVMRTDQ 120
           D+RYD  LEFSE+IFG EKEFEL HLETC+ CTGTGAK+GSKMR+CSTCGGRGQVMRT+Q
Sbjct: 189 DIRYDFSLEFSEAIFGTEKEFELFHLETCDACTGTGAKLGSKMRVCSTCGGRGQVMRTEQ 248

Query: 121 TPFGLFSQVSVCPSCGGEGEVISEYCRKCSGEGRIRLKKNIKVKVPPGVSTGSILRVVGE 180
           TPFGLFSQVSVCP+CGG+GEVISE CRKCSGEGRIR+KKNIKVKVPPGVS GSILRV GE
Sbjct: 249 TPFGLFSQVSVCPNCGGDGEVISESCRKCSGEGRIRVKKNIKVKVPPGVSAGSILRVTGE 308

Query: 181 GDAGPRGGPPGDLYVYLDVEEIPGIQRDGIDLFSTISISYLDAIMGTVVKVKTVEGISEL 240
           GDAGPRGGPPGDLYVYL+V EIPGIQRD ++L STISISYL+AI+G+VVKVKTVEG SEL
Sbjct: 309 GDAGPRGGPPGDLYVYLNVLEIPGIQRDDVNLRSTISISYLEAILGSVVKVKTVEGTSEL 368

Query: 241 QVPPGTQPGDVLVLAKKGAPKLNKPSIRGDHLFTVKVTIPNRISAKERELLEELASLRNT 300
           Q+P GTQPGDVLVLA+KG PKLN+PSIRGDHLFTVKVTIP RIS+KERE+LEELASL N 
Sbjct: 369 QIPAGTQPGDVLVLARKGVPKLNRPSIRGDHLFTVKVTIPKRISSKEREVLEELASLGNP 428

Query: 301 TGSRTRTRPKTQ--AATTTSPEA----SQVGTVAEKNEEPEDQNDPWKKLKDFAGSVANG 354
           + S +++RP+TQ  A +  SP      S   TV E+ E+ ED++D W KLK+ AGSVANG
Sbjct: 429 S-SHSKSRPRTQPSAGSKESPAVQMAESPTATVTEEPEKSEDEDDLWNKLKNVAGSVANG 487

Query: 355 ALKWLKENL 363
           ALKW K+NL
Sbjct: 488 ALKWFKDNL 496

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449468934|ref|XP_004152176.1| PREDICTED: chaperone protein DnaJ-like [Cucumis sativus] gi|449522377|ref|XP_004168203.1| PREDICTED: chaperone protein DnaJ-like [Cucumis sativus]

 Score =  585 bits (1508), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 301/367 (82%), Positives = 331/367 (90%), Gaps = 5/367 (1%)

Query: 1   MYDQYGEAGVKSTVGGGSSAYTTNPFDLFETFFGPSMGGFPGMNQTGFRTRRRSTVTKGE 60
           +YDQYGEAGVKSTVGG SSAYTTNPFDLFETFFGPSMGGF GM+ TGFRTRR ST+TKGE
Sbjct: 140 LYDQYGEAGVKSTVGG-SSAYTTNPFDLFETFFGPSMGGFGGMDPTGFRTRRSSTLTKGE 198

Query: 61  DLRYDIVLEFSESIFGAEKEFELSHLETCEVCTGTGAKMGSKMRICSTCGGRGQVMRTDQ 120
           D+RYDI L  SE+IFG+EKEFELSHLETCEVCTGTG+K+GSKMRICSTCGGRGQVMRT+Q
Sbjct: 199 DIRYDINLGSSEAIFGSEKEFELSHLETCEVCTGTGSKVGSKMRICSTCGGRGQVMRTEQ 258

Query: 121 TPFGLFSQVSVCPSCGGEGEVISEYCRKCSGEGRIRLKKNIKVKVPPGVSTGSILRVVGE 180
           TPFGLFSQVSVCP+CGG GEVIS++CRKCSGEGRIR+KKNIKVKVPPGVS GSILRV GE
Sbjct: 259 TPFGLFSQVSVCPNCGGNGEVISDFCRKCSGEGRIRVKKNIKVKVPPGVSAGSILRVAGE 318

Query: 181 GDAGPRGGPPGDLYVYLDVEEIPGIQRDGIDLFSTISISYLDAIMGTVVKVKTVEGISEL 240
           GDAGPRGGPPGDL+VYLDVEEIPGIQRDGI+L+STI+ISYLDAIMG+VVKVKTVEG++EL
Sbjct: 319 GDAGPRGGPPGDLFVYLDVEEIPGIQRDGINLYSTIAISYLDAIMGSVVKVKTVEGMAEL 378

Query: 241 QVPPGTQPGDVLVLAKKGAPKLNKPSIRGDHLFTVKVTIPNRISAKERELLEELASLRNT 300
           Q+PPGTQPGDVLVLAKKG PKLNKPSIRGDHLFT+KVTIPNRIS KERELLEELASL N 
Sbjct: 379 QIPPGTQPGDVLVLAKKGVPKLNKPSIRGDHLFTIKVTIPNRISEKERELLEELASLSNN 438

Query: 301 --TGSRTRTRPKTQAATTTSPEASQVGTVAEKNEEPE--DQNDPWKKLKDFAGSVANGAL 356
             TGSR RTR K+Q   T +   ++V TVA   E  +  D ND WKK++DFAGSVA GAL
Sbjct: 439 AGTGSRFRTRQKSQPQPTNTITENEVKTVANSTESADDGDSNDIWKKVQDFAGSVAQGAL 498

Query: 357 KWLKENL 363
           KWLK+NL
Sbjct: 499 KWLKDNL 505

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297839937|ref|XP_002887850.1| hypothetical protein ARALYDRAFT_895995 [Arabidopsis lyrata subsp. lyrata] gi|297333691|gb|EFH64109.1| hypothetical protein ARALYDRAFT_895995 [Arabidopsis lyrata subsp. lyrata]

 Score =  571 bits (1471), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 280/366 (76%), Positives = 320/366 (87%), Gaps = 3/366 (0%)

Query: 1   MYDQYGEAGVKSTVGGGSSAYTTNPFDLFETFFGPSMGGFPGMNQTGFRTRRRSTVTKGE 60
           +YDQYGEAGVKSTVGG S  YTTNPFDLFETFFG SMGGFPG++Q  F   RRS VTKGE
Sbjct: 127 LYDQYGEAGVKSTVGGASGTYTTNPFDLFETFFGASMGGFPGVDQADFGRTRRSRVTKGE 186

Query: 61  DLRYDIVLEFSESIFGAEKEFELSHLETCEVCTGTGAKMGSKMRICSTCGGRGQVMRTDQ 120
           DLRYDI LE SE+IFG+EKEF+L+HLETCE C GTGAK GSKMRICSTCGGRGQVMRT+Q
Sbjct: 187 DLRYDITLELSEAIFGSEKEFDLTHLETCEACAGTGAKAGSKMRICSTCGGRGQVMRTEQ 246

Query: 121 TPFGLFSQVSVCPSCGGEGEVISEYCRKCSGEGRIRLKKNIKVKVPPGVSTGSILRVVGE 180
           TPFG+FSQVS+CP+CGG+GEVISE CRKCSGEGR+R KK+IKVK+PPGVS GSILRV GE
Sbjct: 247 TPFGMFSQVSICPNCGGDGEVISENCRKCSGEGRVRTKKSIKVKIPPGVSAGSILRVAGE 306

Query: 181 GDAGPRGGPPGDLYVYLDVEEIPGIQRDGIDLFSTISISYLDAIMGTVVKVKTVEGISEL 240
           GD+GPRGGPPGDLYVYLDVE++ GIQRDGI+L ST+SISYLDAI+G VVKVKTVEG +EL
Sbjct: 307 GDSGPRGGPPGDLYVYLDVEDVRGIQRDGINLLSTLSISYLDAILGAVVKVKTVEGDTEL 366

Query: 241 QVPPGTQPGDVLVLAKKGAPKLNKPSIRGDHLFTVKVTIPNRISAKERELLEELASLRNT 300
           Q+PPGTQPGDVLVLAKKG PKLN+PSIRGDHLFTVKV+IPN+ISA ERELLEELASL++T
Sbjct: 367 QIPPGTQPGDVLVLAKKGVPKLNRPSIRGDHLFTVKVSIPNQISAGERELLEELASLKDT 426

Query: 301 TGSRTRTRPKTQAATTTSPEASQVGTVAE---KNEEPEDQNDPWKKLKDFAGSVANGALK 357
           + +R+RTR K Q  ++ S   S +    +   +NEE E +ND WK +KDFAGSVANGALK
Sbjct: 427 SSNRSRTRAKPQQPSSLSSAPSSLENRTDEVEENEEAEQENDLWKNIKDFAGSVANGALK 486

Query: 358 WLKENL 363
           WL++NL
Sbjct: 487 WLRDNL 492

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|18412605|ref|NP_565227.1| molecular chaperone Hsp40/DnaJ-like protein [Arabidopsis thaliana] gi|30699481|ref|NP_849910.1| molecular chaperone Hsp40/DnaJ-like protein [Arabidopsis thaliana] gi|30699483|ref|NP_849911.1| molecular chaperone Hsp40/DnaJ-like protein [Arabidopsis thaliana] gi|110739057|dbj|BAF01446.1| hypothetical protein [Arabidopsis thaliana] gi|332198224|gb|AEE36345.1| molecular chaperone Hsp40/DnaJ-like protein [Arabidopsis thaliana] gi|332198225|gb|AEE36346.1| molecular chaperone Hsp40/DnaJ-like protein [Arabidopsis thaliana] gi|332198226|gb|AEE36347.1| molecular chaperone Hsp40/DnaJ-like protein [Arabidopsis thaliana]

 Score =  569 bits (1466), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 276/369 (74%), Positives = 320/369 (86%), Gaps = 8/369 (2%)

Query: 1   MYDQYGEAGVKSTVGGGSSAYTTNPFDLFETFFGPSMGGFPGMNQTGFRTRRRSTVTKGE 60
           +YDQYGEAGVKSTVGG S  YT+NPFDLFETFFG SMGGFPGM+Q  F   RRS VTKGE
Sbjct: 134 LYDQYGEAGVKSTVGGASGPYTSNPFDLFETFFGASMGGFPGMDQADFGRTRRSRVTKGE 193

Query: 61  DLRYDIVLEFSESIFGAEKEFELSHLETCEVCTGTGAKMGSKMRICSTCGGRGQVMRTDQ 120
           DLRYDI LE SE+IFG+EKEF+L+HLETCE C GTGAK GSKMRICSTCGGRGQVMRT+Q
Sbjct: 194 DLRYDITLELSEAIFGSEKEFDLTHLETCEACAGTGAKAGSKMRICSTCGGRGQVMRTEQ 253

Query: 121 TPFGLFSQVSVCPSCGGEGEVISEYCRKCSGEGRIRLKKNIKVKVPPGVSTGSILRVVGE 180
           TPFG+FSQVS+CP+CGG+GEVISE CRKCSGEGR+R+KK+IKVK+PPGVS GSILRV GE
Sbjct: 254 TPFGMFSQVSICPNCGGDGEVISENCRKCSGEGRVRIKKSIKVKIPPGVSAGSILRVAGE 313

Query: 181 GDAGPRGGPPGDLYVYLDVEEIPGIQRDGIDLFSTISISYLDAIMGTVVKVKTVEGISEL 240
           GD+GPRGGPPGDLYVYLDVE++ GI+RDGI+L ST+SISYLDAI+G VVKVKTVEG +EL
Sbjct: 314 GDSGPRGGPPGDLYVYLDVEDVRGIERDGINLLSTLSISYLDAILGAVVKVKTVEGDTEL 373

Query: 241 QVPPGTQPGDVLVLAKKGAPKLNKPSIRGDHLFTVKVTIPNRISAKERELLEELASLRNT 300
           Q+PPGTQPGDVLVLAKKG PKLN+PSIRGDHLFTVKV++PN+ISA ERELLEELASL++T
Sbjct: 374 QIPPGTQPGDVLVLAKKGVPKLNRPSIRGDHLFTVKVSVPNQISAGERELLEELASLKDT 433

Query: 301 TGSRTRTRPKTQAATTTSPEASQVGTVAEKNEEPEDQNDP------WKKLKDFAGSVANG 354
           + +R+RTR K Q  +T S   S  G+  +K+E  E+  +P      W  +K+FAGSVANG
Sbjct: 434 SSNRSRTRAKPQQPSTLSTAPS--GSENKKDEVKEENEEPEQENYLWNNIKEFAGSVANG 491

Query: 355 ALKWLKENL 363
           ALKWL++NL
Sbjct: 492 ALKWLRDNL 500

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	363
TAIR|locus:2016234	500	AT1G80030 [Arabidopsis thalian	1.0	0.726	0.664	1.5e-129
TAIR|locus:2088585	517	AT3G17830 [Arabidopsis thalian	0.909	0.638	0.385	3.6e-66
TAIR|locus:2140035	447	AT4G39960 [Arabidopsis thalian	0.771	0.626	0.469	2e-63
TAIR|locus:2041258	442	AT2G22360 [Arabidopsis thalian	0.752	0.617	0.459	4.8e-62
TIGR_CMR|GSU_0034	373	GSU_0034 "chaperone protein dn	0.735	0.715	0.367	1.6e-40
TIGR_CMR|CHY_0416	381	CHY_0416 "chaperone protein dn	0.765	0.729	0.346	1.1e-39
TIGR_CMR|BA_4538	371	BA_4538 "chaperone protein dna	0.754	0.738	0.332	3.7e-39
TIGR_CMR|DET_1398	356	DET_1398 "co-chaperone protein	0.746	0.761	0.315	1.6e-38
TIGR_CMR|SO_1127	378	SO_1127 "chaperone protein Dna	0.735	0.706	0.339	3.4e-38
UNIPROTKB|P95830	378	dnaJ "Chaperone protein DnaJ"	0.746	0.716	0.333	2.4e-37

TAIR|locus:2016234 AT1G80030 [Arabidopsis thaliana (taxid:3702)]

 Score = 1271 (452.5 bits), Expect = 1.5e-129, P = 1.5e-129
 Identities = 244/367 (66%), Positives = 285/367 (77%)

Query:     1 MYDQYGEAGVKSTVGGGSSAYTTNPFDLFETXXXXXXXXXXXXNQTGFRTRRRSTVTKGE 60
             +YDQYGEAGVKSTVGG S  YT+NPFDLFET            +Q  F   RRS VTKGE
Sbjct:   134 LYDQYGEAGVKSTVGGASGPYTSNPFDLFETFFGASMGGFPGMDQADFGRTRRSRVTKGE 193

Query:    61 DLRYDIVLEFSESIFGAEKEFELSHLETCEVCTGTGAKMGSKMRICSTCGGRGQVMRTDQ 120
             DLRYDI LE SE+IFG+EKEF+L+HLETCE C GTGAK GSKMRICSTCGGRGQVMRT+Q
Sbjct:   194 DLRYDITLELSEAIFGSEKEFDLTHLETCEACAGTGAKAGSKMRICSTCGGRGQVMRTEQ 253

Query:   121 TPFGLFSQVSVCPSCGGEGEVISEYCRKCSGEGRIRLKKNIKVKVPPGVSTGSILRVVXX 180
             TPFG+FSQVS+CP+CGG+GEVISE CRKCSGEGR+R+KK+IKVK+PPGVS GSILRV   
Sbjct:   254 TPFGMFSQVSICPNCGGDGEVISENCRKCSGEGRVRIKKSIKVKIPPGVSAGSILRVAGE 313

Query:   181 XXXXXXXXXXXDLYVYLDVEEIPGIQRDGIDLFSTISISYLDAIMGTVVKVKTVEGISEL 240
                        DLYVYLDVE++ GI+RDGI+L ST+SISYLDAI+G VVKVKTVEG +EL
Sbjct:   314 GDSGPRGGPPGDLYVYLDVEDVRGIERDGINLLSTLSISYLDAILGAVVKVKTVEGDTEL 373

Query:   241 QVPPGTQPGDVLVLAKKGAPKLNKPSIRGDHLFTVKVTIPNRIXXXXXXXXXXXXXXXNT 300
             Q+PPGTQPGDVLVLAKKG PKLN+PSIRGDHLFTVKV++PN+I               +T
Sbjct:   374 QIPPGTQPGDVLVLAKKGVPKLNRPSIRGDHLFTVKVSVPNQISAGERELLEELASLKDT 433

Query:   301 TGSRTRTRPKTQAATT--TSPEASQ--VGTVAEKNEEPEDQNDPWKKLKDFAGSVANGAL 356
             + +R+RTR K Q  +T  T+P  S+     V E+NEEPE +N  W  +K+FAGSVANGAL
Sbjct:   434 SSNRSRTRAKPQQPSTLSTAPSGSENKKDEVKEENEEPEQENYLWNNIKEFAGSVANGAL 493

Query:   357 KWLKENL 363
             KWL++NL
Sbjct:   494 KWLRDNL 500

GO:0005524 "ATP binding" evidence=IEA

GO:0006457 "protein folding" evidence=IEA;ISS

GO:0009408 "response to heat" evidence=IEA

GO:0009507 "chloroplast" evidence=ISM;IDA

GO:0031072 "heat shock protein binding" evidence=IEA

GO:0051082 "unfolded protein binding" evidence=IEA

GO:0009535 "chloroplast thylakoid membrane" evidence=IDA

GO:0009941 "chloroplast envelope" evidence=IDA

GO:0010027 "thylakoid membrane organization" evidence=RCA

GO:0016117 "carotenoid biosynthetic process" evidence=RCA

TAIR|locus:2088585 AT3G17830 [Arabidopsis thaliana (taxid:3702)]

 Score = 673 (242.0 bits), Expect = 3.6e-66, P = 3.6e-66
 Identities = 135/350 (38%), Positives = 202/350 (57%)

Query:     2 YDQYGEAGVKSTVGGGSSAYT-TNPFDLFETXXXXXXXXXXXXNQTG---FRTRRRSTVT 57
             YD++GEAG++    G        +PFDL+               ++G   F    + ++ 
Sbjct:   123 YDRFGEAGLEGDFNGSQDTSPGVDPFDLYSAFFGGSDGFFGGMGESGGMGFDFMNKRSLD 182

Query:    58 KGEDLRYDIVLEFSESIFGAEKEFELSHLETCEVCTGTGAKMGSKMRICSTCGGRGQVMR 117
                D+RYD+ L F E++FG ++E E+S+LETC+ C GTGAK  + ++ CS+C G+G+VM 
Sbjct:   183 L--DIRYDLRLSFEEAVFGVKREIEVSYLETCDGCGGTGAKSSNSIKQCSSCDGKGRVMN 240

Query:   118 TDQTPFGLFSQVSVCPSCGGEGEVISEYCRKCSGEGRIRLKKNIKVKVPPGVSTGSILRV 177
             + +TPFG+ SQVS C  CGGEG+ I++ CRKC G GR+R +K + V VPPGVS  + +R+
Sbjct:   241 SQRTPFGIMSQVSTCSKCGGEGKTITDKCRKCIGNGRLRARKKMDVVVPPGVSDRATMRI 300

Query:   178 VXXXXXXXXXXXXXDLYVYLDVEEIPGIQRDGIDLFSTISISYLDAIMGTVVKVKTVEGI 237
                           DL++ L V+E  GI+R+G++L+S I+I + DAI+G   KV+TVEG 
Sbjct:   301 QGEGNMDKRSGRAGDLFIVLQVDEKRGIRREGLNLYSNINIDFTDAILGATTKVETVEGS 360

Query:   238 SELQVPPGTQPGDVLVLAKKGAPKLNKPSIRGDHLFTVKVTIPNRIXXXXXXXXXXXXXX 297
              +L++PPGTQPGD + L +KG P  ++PSIRGDH F VK++IP ++              
Sbjct:   361 MDLRIPPGTQPGDTVKLPRKGVPDTDRPSIRGDHCFVVKISIPKKLSERERKLVEEFSSL 420

Query:   298 XNTTGSRTRTRPKTQAATTTSPEASQVGTVAEKNEEPEDQNDPWKKLKDF 347
               ++ S   T P     T T  E    G+      EP  +   W K+K+F
Sbjct:   421 RRSSSS---TGP-----TETRQEEQSFGS------EPRKEPSLWHKMKNF 456

GO:0005524 "ATP binding" evidence=IEA

GO:0006457 "protein folding" evidence=IEA;ISS

GO:0009408 "response to heat" evidence=IEA

GO:0031072 "heat shock protein binding" evidence=IEA

GO:0051082 "unfolded protein binding" evidence=IEA

TAIR|locus:2140035 AT4G39960 [Arabidopsis thaliana (taxid:3702)]

 Score = 647 (232.8 bits), Expect = 2.0e-63, P = 2.0e-63
 Identities = 133/283 (46%), Positives = 172/283 (60%)

Query:     1 MYDQYGEAGVKSTVGGGSSAYTTNPFDLFETXXXXXXXXXXXXNQTGFRTRRRSTVTKGE 60
             +YD+YGEAGVK    GG   Y+ NPFDLFE+               G R  R S    GE
Sbjct:   144 LYDRYGEAGVKGAGMGGMGDYS-NPFDLFESLFEGMGGMGGMGGGMGSRGSR-SRAIDGE 201

Query:    61 DLRYDIVLEFSESIFGAEKEFELSHLETCEVCTGTGAKMGSKMRICSTCGGRGQVMRTDQ 120
             D  Y ++L F E++FG EKE E+S LE+C  C G+GAK G+K   C TCGG+GQV+ + +
Sbjct:   202 DEYYSLILNFKEAVFGIEKEIEISRLESCGTCNGSGAKAGTKPTKCKTCGGQGQVVASTR 261

Query:   121 TPFGLFSQVSVCPSCGGEGEVISEYCRKCSGEGRIRLKKNIKVKVPPGVSTGSILRVVXX 180
             TP G+F QV  C  C G GE IS+ C  CSG+GR+R  K I +KVP GV +GS LRV   
Sbjct:   262 TPLGVFQQVMTCSPCNGTGE-ISKPCGACSGDGRVRRTKRISLKVPAGVDSGSRLRVRGE 320

Query:   181 XXXXXXXXXXXDLYVYLDVEEIPGIQRDGIDLFSTISISYLDAIMGTVVKVKTVEGISEL 240
                        DL+  ++V   P ++RD  ++  T  ISY+DAI+GT +KV TV+G  +L
Sbjct:   321 GNAGKRGGSPGDLFAVIEVIPDPVLKRDDTNILYTCKISYVDAILGTTLKVPTVDGEVDL 380

Query:   241 QVPPGTQPGDVLVLAKKGAPKLNKPSIRGDHLFTVKVTIPNRI 283
             +VP GTQP   LV+AKKG P LNK  +RGD L  V+V IP R+
Sbjct:   381 KVPAGTQPSTTLVMAKKGVPVLNKSKMRGDQLVRVQVEIPKRL 423

GO:0005524 "ATP binding" evidence=IEA

GO:0005739 "mitochondrion" evidence=ISM

GO:0006457 "protein folding" evidence=IEA;ISS

GO:0009408 "response to heat" evidence=IEA

GO:0031072 "heat shock protein binding" evidence=IEA

GO:0051082 "unfolded protein binding" evidence=IEA

GO:0009507 "chloroplast" evidence=IDA

GO:0009535 "chloroplast thylakoid membrane" evidence=IDA

GO:0009941 "chloroplast envelope" evidence=IDA

TAIR|locus:2041258 AT2G22360 [Arabidopsis thaliana (taxid:3702)]

 Score = 634 (228.2 bits), Expect = 4.8e-62, P = 4.8e-62
 Identities = 130/283 (45%), Positives = 174/283 (61%)

Query:     1 MYDQYGEAGVKSTVGGGSSAYTTNPFDLFETXXXXXXXXXXXXNQTGFRTRRRSTVTKGE 60
             +YD+YGEAG+K   G G+  ++ NPFDLF++               G     RS    G+
Sbjct:   145 LYDRYGEAGLKGAAGFGNGDFS-NPFDLFDSLFEGFGG--------GMGRGSRSRAVDGQ 195

Query:    61 DLRYDIVLEFSESIFGAEKEFELSHLETCEVCTGTGAKMGSKMRICSTCGGRGQVMRTDQ 120
             D  Y ++L F E++FG EKE E+S LE+C  C G+GAK G+K   C+TCGG+GQV+   +
Sbjct:   196 DEYYTLILNFKEAVFGMEKEIEISRLESCGTCEGSGAKPGTKPTKCTTCGGQGQVVSAAR 255

Query:   121 TPFGLFSQVSVCPSCGGEGEVISEYCRKCSGEGRIRLKKNIKVKVPPGVSTGSILRVVXX 180
             TP G+F QV  C SC G GE IS  C  CSG+GR+R  K I +KVP GV +GS LRV   
Sbjct:   256 TPLGVFQQVMTCSSCNGTGE-ISTPCGTCSGDGRVRKTKRISLKVPAGVDSGSRLRVRGE 314

Query:   181 XXXXXXXXXXXDLYVYLDVEEIPGIQRDGIDLFSTISISYLDAIMGTVVKVKTVEGISEL 240
                        DL+V ++V   P ++RD  ++  T  ISY+DAI+GT +KV TV+G  +L
Sbjct:   315 GNAGKRGGSPGDLFVVIEVIPDPILKRDDTNILYTCKISYIDAILGTTLKVPTVDGTVDL 374

Query:   241 QVPPGTQPGDVLVLAKKGAPKLNKPSIRGDHLFTVKVTIPNRI 283
             +VP GTQP   LV+AKKG P LNK ++RGD L  V+V IP R+
Sbjct:   375 KVPAGTQPSTTLVMAKKGVPVLNKSNMRGDQLVRVQVEIPKRL 417

GO:0005524 "ATP binding" evidence=IEA

GO:0005739 "mitochondrion" evidence=ISM

GO:0006457 "protein folding" evidence=IEA;ISS

GO:0009408 "response to heat" evidence=IEA

GO:0031072 "heat shock protein binding" evidence=IEA

GO:0051082 "unfolded protein binding" evidence=IEA

GO:0009535 "chloroplast thylakoid membrane" evidence=IDA

GO:0009507 "chloroplast" evidence=IDA

GO:0009941 "chloroplast envelope" evidence=IDA

TIGR_CMR|GSU_0034 GSU_0034 "chaperone protein dnaJ" [Geobacter sulfurreducens PCA (taxid:243231)]

 Score = 431 (156.8 bits), Expect = 1.6e-40, P = 1.6e-40
 Identities = 105/286 (36%), Positives = 147/286 (51%)

Query:     2 YDQYGEAGVKST--VGGGSSAYTTN-PF-DLFETXXXXXXXXXXXXNQTGFRTRRRSTVT 57
             YDQ+G AGV +    GGG   +    PF D+F                 G R RR     
Sbjct:    68 YDQFGHAGVGAGGFSGGGFGGFGAGTPFGDIF----GDIFGDIFGGRPRGSRGRR----- 118

Query:    58 KGEDLRYDIVLEFSESIFGAEKEFELSHLETCEVCTGTGAKMGSKMRICSTCGGRGQVMR 117
              G+DL+Y++ L F E+ FGAEKE ++ + + C  C G+GAK G++ ++C TC G GQV R
Sbjct:   119 -GDDLQYNMELSFEEAAFGAEKEIQVPYGKRCGDCGGSGAKPGTEPKVCPTCRGAGQV-R 176

Query:   118 TDQTPFGLFSQVSVCPSCGGEGEVISEYCRKCSGEGRIRLKKNIKVKVPPGVSTGSILRV 177
               Q   G FS    C  C GEG V+   C  C G G IR  K + VKVP GV TG+ L++
Sbjct:   177 FQQ---GFFSVSKTCNHCNGEGRVVENPCTSCRGSGMIRDTKTLSVKVPAGVETGTRLKL 233

Query:   178 VXXXXXXXXXXXXXDLYVYLDVEEIPGIQRDGIDLFSTISISYLDAIMGTVVKVKTVEGI 237
                           DLYV + V E P   R+  D+   I +S++ A +G  ++V T++G 
Sbjct:   234 SGEGGQGIKGGGNGDLYVAIAVREHPIFTREDNDVLCEIPVSFVQAALGCEIEVPTLDGK 293

Query:   238 SELQVPPGTQPGDVLVLAKKGAPKLNKPSIRGDHLFTVKVTIPNRI 283
               +++P GTQ G +  L  KG P+L     RGD L  +KV  P+ +
Sbjct:   294 VSMKIPEGTQSGRIFRLRGKGVPQLQGYG-RGDQLVIIKVETPSNL 338

GO:0009408 "response to heat" evidence=ISS

TIGR_CMR|CHY_0416 CHY_0416 "chaperone protein dnaJ" [Carboxydothermus hydrogenoformans Z-2901 (taxid:246194)]

 Score = 423 (154.0 bits), Expect = 1.1e-39, P = 1.1e-39
 Identities = 99/286 (34%), Positives = 147/286 (51%)

Query:     2 YDQYGEAGVKSTV---GGGSSAYTTNPFDLFETXXXXXXXXXXXXNQTGFRTRRRSTVTK 58
             YDQ+G AGV       GG       N  D+F                +G R  R+  V  
Sbjct:    65 YDQFGHAGVDGNFAGQGGFGGGAGINFEDIFSGFGGFGDLFDMVFG-SG-RKARQGPVP- 121

Query:    59 GEDLRYDIVLEFSESIFGAEKEFELSHLETCEVCTGTGAKMGSKMRICSTCGGRGQVMRT 118
             G+D+   + L   E++FG EKE  ++  ETC  C G GA+ G+ +  C TC GRGQ+ + 
Sbjct:   122 GDDIEAVLELTLEEAVFGGEKELRVTRTETCGHCHGNGAEPGTPIITCPTCQGRGQIHQE 181

Query:   119 DQTPFGLFSQVSVCPSCGGEGEVISEYCRKCSGEGRIRLKKNIKVKVPPGVSTGSILRVV 178
              +T FG   +  VC +C GEG++    CR+C G G +R  ++I VK+PPG+  G  LR+ 
Sbjct:   182 VKTLFGRMVRSQVCSTCRGEGKIPKTPCRECGGSGLVRKTRSITVKIPPGIDHGHRLRIA 241

Query:   179 XXXXXXXXXXXXXDLYVYLDVEEIPGIQRDGIDLFSTISISYLDAIMGTVVKVKTVEGIS 238
                          DLYVY+ ++     +R+ I L     IS++ A +G  V++ T++G +
Sbjct:   242 GGGEAGRFGGPPGDLYVYIKIKPHKLFKREDIHLKLEKEISFVQAALGAKVEIPTIDGGT 301

Query:   239 E-LQVPPGTQPGDVLVLAKKGAPKLNKPSIRGDHLFTVKVTIPNRI 283
             E L++P GTQ G V  +  KG P +N  S RG+   TVKV  P ++
Sbjct:   302 EILEIPEGTQTGTVFTIKGKGVPVVNG-SGRGNLYVTVKVVTPTKL 346

GO:0006457 "protein folding" evidence=ISS

GO:0009408 "response to heat" evidence=ISS

TIGR_CMR|BA_4538 BA_4538 "chaperone protein dnaJ" [Bacillus anthracis str. Ames (taxid:198094)]

 Score = 418 (152.2 bits), Expect = 3.7e-39, P = 3.7e-39
 Identities = 94/283 (33%), Positives = 132/283 (46%)

Query:     2 YDQYGEAGVKSTVGG-GSSAYTTNPFDLFETXXXXXXXXXXXXNQTGFRTRRRSTVTKGE 60
             YDQ+G AG     GG G        F  FE                G R R  +   +G 
Sbjct:    65 YDQFGHAGANQGFGGFGGGGDFGGGFG-FEDIFSSFFGGG------GGRRRDPNAPRQGA 117

Query:    61 DLRYDIVLEFSESIFGAEKEFELSHLETCEVCTGTGAKMGSKMRICSTCGGRGQVMRTDQ 120
             DL+Y + LEF E+IFG E   E+   + C+ C G+GAK G+    C  C G GQV     
Sbjct:   118 DLQYQVTLEFEEAIFGKELNVEIPVEDPCDTCKGSGAKPGTSKETCKHCSGSGQVSVEQN 177

Query:   121 TPFGLFSQVSVCPSCGGEGEVISEYCRKCSGEGRIRLKKNIKVKVPPGVSTGSILRVVXX 180
             TPFG       C  C G G++I E C  C G G++R +K I VK+P G+  G  +RV   
Sbjct:   178 TPFGRIVNRQACSHCSGTGQMIKEKCTTCHGSGKVRKRKKINVKIPAGIDNGQQIRVSGK 237

Query:   181 XXXXXXXXXXXDLYVYLDVEEIPGIQRDGIDLFSTISISYLDAIMGTVVKVKTVEGISEL 240
                        DLYV + V      +R+G  +   + +++    +G  V+V TV G  +L
Sbjct:   238 GEAGVNGGPAGDLYVVVHVRSHEFFEREGDHIICEMPLTFAQMALGAEVEVPTVHGKVKL 297

Query:   241 QVPPGTQPGDVLVLAKKGAPKLNKPSIRGDHLFTVKVTIPNRI 283
             ++P GTQ G    L  KGAP +     +GD    V+V +P ++
Sbjct:   298 KIPAGTQTGTEFRLKGKGAPNVRGYG-QGDQYVVVRVVVPTKL 339

GO:0009408 "response to heat" evidence=ISS

TIGR_CMR|DET_1398 DET_1398 "co-chaperone protein DnaJ" [Dehalococcoides ethenogenes 195 (taxid:243164)]

 Score = 412 (150.1 bits), Expect = 1.6e-38, P = 1.6e-38
 Identities = 89/282 (31%), Positives = 141/282 (50%)

Query:     2 YDQYGEAGVKSTVGGGSSAYTTNPFDLFETXXXXXXXXXXXXNQTGFRTRRRSTVTKGED 61
             YD++G          GS A+    F+ F+               T  ++ +R    +G D
Sbjct:    66 YDRFG-------FSAGSDAFGQGGFENFDFGGLGSIFETFFGGAT--QSAKRGP-RRGPD 115

Query:    62 LRYDIVLEFSESIFGAEKEFELSHLETCEVCTGTGAKMGSKMRICSTCGGRGQVMRTDQT 121
             + YDI +   E+  G EKE     LE C  C+GTGAK G+ +  C+ C G GQV +  ++
Sbjct:   116 MSYDIRITLEEAATGVEKEITTERLEYCSECSGTGAKAGTSLVKCTNCNGTGQVYQVQKS 175

Query:   122 PFGLFSQVSVCPSCGGEGEVISEYCRKCSGEGRIRLKKNIKVKVPPGVSTGSILRVVXXX 181
              FG F+ V+ CP C GEG +I E C KC G G+  +K+ ++VK+P GV+ G+ +R+    
Sbjct:   176 VFGRFTSVTPCPKCRGEGTIIGEPCAKCRGTGKEYVKRTVQVKIPAGVADGNQIRLNGYG 235

Query:   182 XXXXXXXXXXDLYVYLDVEEIPGIQRDGIDLFSTISISYLDAIMGTVVKVKTVEGISELQ 241
                       D+Y+ + +      +RDG D+   + I++  A +GT V V  +    +L+
Sbjct:   236 GVGDKGASAGDVYINVSIASHADFKRDGDDVIYELEINFAQAALGTEVNVPGLSTSHKLK 295

Query:   242 VPPGTQPGDVLVLAKKGAPKLNKPSIRGDHLFTVKVTIPNRI 283
             +P G+Q G   VL  KG P LN+    GD +  + V  P ++
Sbjct:   296 IPSGSQNGKYFVLKGKGIPHLNRFG-SGDEMVHLNVVTPEKL 336

GO:0009408 "response to heat" evidence=ISS

TIGR_CMR|SO_1127 SO_1127 "chaperone protein DnaJ" [Shewanella oneidensis MR-1 (taxid:211586)]

 Score = 409 (149.0 bits), Expect = 3.4e-38, P = 3.4e-38
 Identities = 95/280 (33%), Positives = 138/280 (49%)

Query:     2 YDQYGEAGVKSTVGGGSSAYTTNPF-DLFETXXXXXXXXXXXXNQTGFRTRRRSTVTKGE 60
             YDQ+G AGV    GGG        F D+F                 G R   +    +G 
Sbjct:    66 YDQFGHAGVDPNRGGGGGYGGAGDFGDIFGDVFGDIFGG-------GRRGGGQRQAARGS 118

Query:    61 DLRYDIVLEFSESIFGAEKEFELSHLETCEVCTGTGAKMGSKMRICSTCGGRGQVMRTDQ 120
             DLRY++ L   E++ G  KE  +  L +C+VC G+GAK G+    C+TC G+GQV    Q
Sbjct:   119 DLRYNLELSLEEAVKGLTKELRIPTLASCDVCDGSGAKKGTSATTCTTCHGQGQV----Q 174

Query:   121 TPFGLFSQVSVCPSCGGEGEVISEYCRKCSGEGRIRLKKNIKVKVPPGVSTGSILRVVXX 180
                G F+    CP+C G G++I + C KC G+GR+   K + VK+P GV TG  +R+   
Sbjct:   175 MRQGFFTVQQPCPTCHGRGKIIKDPCAKCHGDGRVEKTKTLSVKIPAGVDTGDRIRLAGE 234

Query:   181 XXXXXXXXXXXDLYVYLDVEEIPGIQRDGIDLFSTISISYLDAIMGTVVKVKTVEGISEL 240
                        DLYV + V E     RDG +L+  + IS+  A +G  ++V T++G   L
Sbjct:   235 GEAGEFGAPAGDLYVQVSVREHAIFVRDGNNLYCEVPISFSKAALGGEIEVPTLDGKVSL 294

Query:   241 QVPPGTQPGDVLVLAKKGAPKLNKPSIRGDHLFTVKVTIP 280
             ++P  TQ G +  L  KG   +   ++ GD L  V +  P
Sbjct:   295 KIPAETQTGRMFRLRGKGVKSVRSHAV-GDLLCKVVMETP 333

GO:0009408 "response to heat" evidence=ISS

UNIPROTKB|P95830 dnaJ "Chaperone protein DnaJ" [Streptococcus pneumoniae TIGR4 (taxid:170187)]

 Score = 401 (146.2 bits), Expect = 2.4e-37, P = 2.4e-37
 Identities = 94/282 (33%), Positives = 130/282 (46%)

Query:     2 YDQYGEAGVKSTVGG--GSSAYT-TNPFDLFETXXXXXXXXXXXXNQTGFRTRRRSTVTK 58
             YDQYG AG     GG  G   +     F  FE                G  +R  +   +
Sbjct:    65 YDQYGAAGANGGFGGAGGFGGFNGAGGFGGFEDIFSSFFGG-------GGSSRNPNAPRQ 117

Query:    59 GEDLRYDIVLEFSESIFGAEKEFELSHLETCEVCTGTGAKMGSKMRICSTCGGRGQVMRT 118
             G+DL+Y + L F E+IFG EKE +      C  C G+GAK G+    C  C G G +   
Sbjct:   118 GDDLQYRVNLTFEEAIFGTEKEVKYHREAGCRTCNGSGAKPGTSPVTCGRCHGAGVINVD 177

Query:   119 DQTPFGLFSQVSVCPSCGGEGEVISEYCRKCSGEGRIRLKKNIKVKVPPGVSTGSILRVV 178
              QTP G+  +   C  C G G+ I   C  C G G  +   ++ VK+P GV TG  +R+ 
Sbjct:   178 TQTPLGMMRRQVTCDVCHGRGKEIKYPCTTCHGTGHEKQAHSVHVKIPAGVETGQQIRLA 237

Query:   179 XXXXXXXXXXXXXDLYVYLDVEEIPGIQRDGIDLFSTISISYLDAIMGTVVKVKTVEGIS 238
                          DLYV + VE     +R+G  +F  ++++++ A +G  V + TV G  
Sbjct:   238 GQGEAGFNGGPYGDLYVVVSVEASDKFEREGTTIFYNLNLNFVQAALGDTVDIPTVHGDV 297

Query:   239 ELQVPPGTQPGDVLVLAKKGAPKLNKPSIRGDHLFTVKVTIP 280
             EL +P GTQ G    L  KGAP L   ++ GD   TV V  P
Sbjct:   298 ELVIPEGTQTGKKFRLRSKGAPSLRGGAV-GDQYVTVNVVTP 338

GO:0005515 "protein binding" evidence=IPI

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
B0JW23	DNAJ_MICAN	No assigned EC number	0.5166	0.8126	0.7887	yes	no
Q7UA76	DNAJ_SYNPX	No assigned EC number	0.5141	0.6804	0.6551	yes	no
B1WVR2	DNAJ_CYAA5	No assigned EC number	0.5133	0.8016	0.7739	yes	no
Q2JH49	DNAJ_SYNJB	No assigned EC number	0.5143	0.7327	0.6751	yes	no
B7KEJ8	DNAJ_CYAP7	No assigned EC number	0.5436	0.8044	0.7786	yes	no
Q7NDG8	DNAJ_GLOVI	No assigned EC number	0.5330	0.6666	0.6318	yes	no
B7JY68	DNAJ_CYAP8	No assigned EC number	0.5033	0.8044	0.7786	yes	no
B0CAZ0	DNAJ_ACAM1	No assigned EC number	0.5250	0.7988	0.7754	yes	no
Q2JW78	DNAJ_SYNJA	No assigned EC number	0.5287	0.7327	0.6751	yes	no
Q8DKR7	DNAJ_THEEB	No assigned EC number	0.5247	0.7851	0.7640	yes	no
B8HLD2	DNAJ_CYAP4	No assigned EC number	0.5201	0.8016	0.7780	yes	no
B1XQF6	DNAJ_SYNP2	No assigned EC number	0.5531	0.6473	0.6216	yes	no
Q5N0G1	DNAJ_SYNP6	No assigned EC number	0.5506	0.6804	0.6569	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	gw1.44.94.1	hypothetical protein (426 aa)
		(Populus trichocarpa)
Predicted Functional Partners:
	fgenesh4_pg.C_LG_V000902	hypothetical protein (229 aa)	•		•						0.634
	estExt_Genewise1_v1.C_LG_II2716	hypothetical protein; Essential component of the PAM complex, a complex required for the transl [...] (274 aa)	•		•						0.608
	eugene3.00130661	hypothetical protein; Essential component of the PAM complex, a complex required for the transl [...] (342 aa)	•		•						0.532
	gw1.XIII.1526.1	annotation not avaliable (81 aa)			•						0.497
	eugene3.00860035	hypothetical protein (705 aa)			•						0.496
	estExt_fgenesh4_pg.C_1500058	hypothetical protein (706 aa)			•						0.496
	estExt_fgenesh4_pg.C_LG_I2723	hypothetical protein (283 aa)			•						0.495
	grail3.0261001401	hypothetical protein (124 aa)			•						0.494
	fgenesh4_pm.C_LG_III000644	hypothetical protein (651 aa)			•						0.494
	eugene3.02610008	hypothetical protein (132 aa)			•						0.494

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	363
PRK14293	374	PRK14293, PRK14293, chaperone protein DnaJ; Provis	1e-136
TIGR02349	354	TIGR02349, DnaJ_bact, chaperone protein DnaJ	1e-127
COG0484	371	COG0484, DnaJ, DnaJ-class molecular chaperone with	1e-103
PRK10767	371	PRK10767, PRK10767, chaperone protein DnaJ; Provis	7e-93
PRK14294	366	PRK14294, PRK14294, chaperone protein DnaJ; Provis	5e-88
PRK14277	386	PRK14277, PRK14277, chaperone protein DnaJ; Provis	1e-76
PRK14297	380	PRK14297, PRK14297, chaperone protein DnaJ; Provis	3e-76
PRK14282	369	PRK14282, PRK14282, chaperone protein DnaJ; Provis	5e-74
PRK14301	373	PRK14301, PRK14301, chaperone protein DnaJ; Provis	2e-71
PRK14276	380	PRK14276, PRK14276, chaperone protein DnaJ; Provis	5e-71
PRK14283	378	PRK14283, PRK14283, chaperone protein DnaJ; Provis	9e-70
PRK14280	376	PRK14280, PRK14280, chaperone protein DnaJ; Provis	2e-69
PRK14281	397	PRK14281, PRK14281, chaperone protein DnaJ; Provis	5e-69
PRK14298	377	PRK14298, PRK14298, chaperone protein DnaJ; Provis	2e-68
PRK14286	372	PRK14286, PRK14286, chaperone protein DnaJ; Provis	4e-67
PRK14278	378	PRK14278, PRK14278, chaperone protein DnaJ; Provis	2e-65
PRK14284	391	PRK14284, PRK14284, chaperone protein DnaJ; Provis	1e-64
PRK14287	371	PRK14287, PRK14287, chaperone protein DnaJ; Provis	3e-64
PRK14289	386	PRK14289, PRK14289, chaperone protein DnaJ; Provis	8e-64
PRK14291	382	PRK14291, PRK14291, chaperone protein DnaJ; Provis	3e-62
PRK14292	371	PRK14292, PRK14292, chaperone protein DnaJ; Provis	8e-59
PRK14300	372	PRK14300, PRK14300, chaperone protein DnaJ; Provis	3e-56
PRK14296	372	PRK14296, PRK14296, chaperone protein DnaJ; Provis	8e-54
PRK14295	389	PRK14295, PRK14295, chaperone protein DnaJ; Provis	8e-53
PRK14279	392	PRK14279, PRK14279, chaperone protein DnaJ; Provis	2e-51
cd10747	158	cd10747, DnaJ_C, C-terminal substrate binding doma	2e-49
PRK14290	365	PRK14290, PRK14290, chaperone protein DnaJ; Provis	9e-48
PRK14285	365	PRK14285, PRK14285, chaperone protein DnaJ; Provis	3e-39
PRK14288	369	PRK14288, PRK14288, chaperone protein DnaJ; Provis	2e-30
PTZ00037	421	PTZ00037, PTZ00037, DnaJ_C chaperone protein; Prov	8e-30
cd10719	65	cd10719, DnaJ_zf, Zinc finger domain of DnaJ and H	6e-26
pfam01556	81	pfam01556, DnaJ_C, DnaJ C terminal domain	1e-22
PRK14299	291	PRK14299, PRK14299, chaperone protein DnaJ; Provis	1e-20
pfam00684	65	pfam00684, DnaJ_CXXCXGXG, DnaJ central domain	5e-20
PRK10266	306	PRK10266, PRK10266, curved DNA-binding protein Cbp	2e-15
cd10747	158	cd10747, DnaJ_C, C-terminal substrate binding doma	7e-11
pfam01556	81	pfam01556, DnaJ_C, DnaJ C terminal domain	2e-05
cd10747	158	cd10747, DnaJ_C, C-terminal substrate binding doma	0.001

>gnl|CDD|237663 PRK14293, PRK14293, chaperone protein DnaJ; Provisional

 Score =  391 bits (1006), Expect = e-136
 Identities = 163/297 (54%), Positives = 199/297 (67%), Gaps = 5/297 (1%)

Query: 2   YDQYGEAGVKSTVGGGSSAYTTNPFDLFETFFGPSMGGFPGMNQTGFRTRRRSTVTKGED 61
           YDQ+GEAGV    G           D+FETFF     GF G    G R RRR    +G+D
Sbjct: 64  YDQFGEAGVSGAAGFPDMGDMGGFADIFETFFS----GFGGAGGQGGRRRRRGP-QRGDD 118

Query: 62  LRYDIVLEFSESIFGAEKEFELSHLETCEVCTGTGAKMGSKMRICSTCGGRGQVMRTDQT 121
           LRYD+ L+F E+IFG EKE  + HLETCE C G+GAK G+    CSTCGG GQV R  +T
Sbjct: 119 LRYDLKLDFREAIFGGEKEIRIPHLETCETCRGSGAKPGTGPTTCSTCGGAGQVRRATRT 178

Query: 122 PFGLFSQVSVCPSCGGEGEVISEYCRKCSGEGRIRLKKNIKVKVPPGVSTGSILRVVGEG 181
           PFG F+QVS CP+C G G+VI + C  C G+G  ++ K +K+ +P GV TG+ LRV GEG
Sbjct: 179 PFGSFTQVSECPTCNGTGQVIEDPCDACGGQGVKQVTKKLKINIPAGVDTGTRLRVSGEG 238

Query: 182 DAGPRGGPPGDLYVYLDVEEIPGIQRDGIDLFSTISISYLDAIMGTVVKVKTVEGISELQ 241
           DAG RGGPPGDLYVYL V+  P  +RDGI++ S I ISYL AI+G  ++V TV+G  EL 
Sbjct: 239 DAGLRGGPPGDLYVYLFVKNDPEFRRDGINILSEIKISYLQAILGDTLEVDTVDGPVELT 298

Query: 242 VPPGTQPGDVLVLAKKGAPKLNKPSIRGDHLFTVKVTIPNRISAKERELLEELASLR 298
           +P GTQP  VL L  KG P+L  P  RGDHL TVKV IP RIS +ERELLE+LA ++
Sbjct: 299 IPAGTQPNTVLTLENKGVPRLGNPVARGDHLITVKVKIPTRISDEERELLEKLAKIK 355

Length = 374

>gnl|CDD|233829 TIGR02349, DnaJ_bact, chaperone protein DnaJ

 Score =  370 bits (951), Expect = e-127
 Identities = 142/301 (47%), Positives = 181/301 (60%), Gaps = 9/301 (2%)

Query: 1   MYDQYGEAGVKSTVGGGSSAY---TTNPFDLFETFFGPSMGGFPGMNQTGFRTRRRSTVT 57
            YDQ+G AG     GGG   +       F  F   FG   GG  G        RRRS   
Sbjct: 60  QYDQFGHAGFNGGGGGGGGGFNGFDIGFFGDFGDIFGDFFGGGGG-----SGRRRRSGPR 114

Query: 58  KGEDLRYDIVLEFSESIFGAEKEFELSHLETCEVCTGTGAKMGSKMRICSTCGGRGQVMR 117
           +GEDLRYD+ L F E++FG EKE E+   E+CE C GTGAK G+  + C TCGG GQV R
Sbjct: 115 RGEDLRYDLELTFEEAVFGVEKEIEIPRKESCETCHGTGAKPGTDPKTCPTCGGTGQVRR 174

Query: 118 TDQTPFGLFSQVSVCPSCGGEGEVISEYCRKCSGEGRIRLKKNIKVKVPPGVSTGSILRV 177
              TPFG F Q   CP+CGGEG++I E C  C G+GR++ +K I VK+P GV TG  LRV
Sbjct: 175 QQGTPFGFFQQQQTCPTCGGEGKIIKEPCSTCKGKGRVKERKTITVKIPAGVDTGQRLRV 234

Query: 178 VGEGDAGPRGGPPGDLYVYLDVEEIPGIQRDGIDLFSTISISYLDAIMGTVVKVKTVEGI 237
            G+G+AG  GGP GDLYV + V+     +RDG DL+  + IS+  AI+G  ++V T++G 
Sbjct: 235 SGKGNAGENGGPNGDLYVVIRVKPHKIFERDGNDLYIEVPISFTQAILGGEIEVPTLDGD 294

Query: 238 SELQVPPGTQPGDVLVLAKKGAPKLNKPSIRGDHLFTVKVTIPNRISAKERELLEELASL 297
            +L++P GTQ G V  L  KG P+L     RGD L TVKV  P  +S +++ELLEELA  
Sbjct: 295 VKLKIPAGTQSGTVFRLKGKGVPRLRGNG-RGDLLVTVKVETPKNLSKEQKELLEELAEA 353

Query: 298 R 298
            
Sbjct: 354 S 354

This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family. Length = 354

>gnl|CDD|223560 COG0484, DnaJ, DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones]

 Score =  308 bits (792), Expect = e-103
 Identities = 125/301 (41%), Positives = 177/301 (58%), Gaps = 15/301 (4%)

Query: 1   MYDQYGEAGVKSTVGGGS--SAYTTNPFDLFETFFGPSMGGFPGMNQTGFRTRRRSTVTK 58
            YDQ+G AG K+   GG     +  +  D+FE FFG   GG       G   RR +   +
Sbjct: 65  AYDQFGHAGFKAGGFGGFGFGGFGGDFGDIFEDFFG---GG-------GGGRRRPNRPRR 114

Query: 59  GEDLRYDIVLEFSESIFGAEKEFELSHLETCEVCTGTGAKMGSKMRICSTCGGRGQVMRT 118
           G DLRY++ +   E++FG +KE  ++   TC  C G+GAK G+  + C TC G GQV   
Sbjct: 115 GADLRYNLEITLEEAVFGVKKEIRVTRSVTCSTCHGSGAKPGTDPKTCPTCNGSGQVRTV 174

Query: 119 DQTPFGLFSQVSVCPSCGGEGEVISEYCRKCSGEGRIRLKKNIKVKVPPGVSTGSILRVV 178
            +T F  FS    CP+C G G++I + C KC G+GR++ KK+I V +P GV  G  +R+ 
Sbjct: 175 QRTGF--FSFQQTCPTCNGTGKIIKDPCGKCKGKGRVKKKKSISVNIPAGVDDGDRIRLS 232

Query: 179 GEGDAGPRGGPPGDLYVYLDVEEIPGIQRDGIDLFSTISISYLDAIMGTVVKVKTVEGIS 238
           GEG+AGP GGP GDLYV++ V+  P  +RDG DL+  + IS+ +A +G  ++V T++G  
Sbjct: 233 GEGEAGPNGGPAGDLYVFVHVKPHPIFERDGDDLYCEVPISFTEAALGGEIEVPTLDGRV 292

Query: 239 ELQVPPGTQPGDVLVLAKKGAPKLNKPSIRGDHLFTVKVTIPNRISAKERELLEELASLR 298
           +L++P GTQ G+V  L  KG PKL     RGD    VKV  P  +S +++ELLEE A   
Sbjct: 293 KLKIPAGTQTGEVFRLRGKGMPKLRS-GGRGDLYVRVKVETPKNLSDEQKELLEEFAKSL 351

Query: 299 N 299
            
Sbjct: 352 G 352

Length = 371

>gnl|CDD|236757 PRK10767, PRK10767, chaperone protein DnaJ; Provisional

 Score =  282 bits (723), Expect = 7e-93
 Identities = 119/312 (38%), Positives = 171/312 (54%), Gaps = 16/312 (5%)

Query: 1   MYDQYGEAGVKSTVGGGSSAYTTNPFDLFETFFGPSMGGFPGMNQTGFRTRRRSTVTKGE 60
            YDQYG A  +   GGG         D+F   FG   GG  G          R    +G 
Sbjct: 65  AYDQYGHAAFEQGGGGGGFGGGGGFGDIFGDIFGDIFGGGRG--------GGRQRARRGA 116

Query: 61  DLRYDIVLEFSESIFGAEKEFELSHLETCEVCTGTGAKMGSKMRICSTCGGRGQVMRTDQ 120
           DLRY++ +   E++ G  KE  +  L TC+ C G+GAK G+  + C TC G GQV R  Q
Sbjct: 117 DLRYNMEITLEEAVRGVTKEIRIPTLVTCDTCHGSGAKPGTSPKTCPTCHGAGQV-RMQQ 175

Query: 121 TPFGLFSQVSVCPSCGGEGEVISEYCRKCSGEGRIRLKKNIKVKVPPGVSTGSILRVVGE 180
              G F+    CP+C G G++I + C+KC G+GR+  +K + VK+P GV TG  +R+ GE
Sbjct: 176 ---GFFTVQQTCPTCHGRGKIIKDPCKKCHGQGRVEKEKTLSVKIPAGVDTGDRIRLSGE 232

Query: 181 GDAGPRGGPPGDLYVYLDVEEIPGIQRDGIDLFSTISISYLDAIMGTVVKVKTVEGISEL 240
           G+AG RGGP GDLYV + V+E P  +RDG DL+  + IS+  A +G  ++V T++G  +L
Sbjct: 233 GEAGERGGPAGDLYVQIHVKEHPIFERDGNDLYCEVPISFTTAALGGEIEVPTLDGRVKL 292

Query: 241 QVPPGTQPGDVLVLAKKGAPKLNKPSIRGDHLFTVKVTIPNRISAKERELLEELASLRNT 300
           ++P GTQ G +  L  KG   +     RGD    V V  P  ++ +++ELLEE      +
Sbjct: 293 KIPEGTQTGKLFRLRGKGVKSVRS-GARGDLYCQVVVETPVNLTKRQKELLEEFE---ES 348

Query: 301 TGSRTRTRPKTQ 312
             S  +  PK++
Sbjct: 349 FESGEKHSPKSK 360

Length = 371

>gnl|CDD|237664 PRK14294, PRK14294, chaperone protein DnaJ; Provisional

 Score =  269 bits (689), Expect = 5e-88
 Identities = 138/314 (43%), Positives = 186/314 (59%), Gaps = 18/314 (5%)

Query: 1   MYDQYGEAGVKSTVGGGSSAYTT--NPF-DLFETFFGPSMGGFPGMNQTGFRTRRRSTVT 57
           +YDQYG  G+  T   G S +    + F D+FE FFG   G          R R R+ V 
Sbjct: 65  IYDQYGHEGLSGTGFSGFSGFDDIFSSFGDIFEDFFGFGGGR---------RGRSRTAVR 115

Query: 58  KGEDLRYDIVLEFSESIFGAEKEFELSHLETCEVCTGTGAKMGSKMRICSTCGGRGQVMR 117
            G DLRYD+ L F E+ FG EKE  +  LETCE C G+G + G+    C  CGG GQV +
Sbjct: 116 AGADLRYDLTLPFLEAAFGTEKEIRIQKLETCEECHGSGCEPGTSPTTCPQCGGSGQVTQ 175

Query: 118 TDQTPFGLFSQVSVCPSCGGEGEVISEYCRKCSGEGRIRLKKNIKVKVPPGVSTGSILRV 177
           +     G FS  + CP C G G+VI   C+ C G+GR+R+ K ++VK+P GV TGS LR+
Sbjct: 176 SQ----GFFSIRTTCPRCRGMGKVIVSPCKTCHGQGRVRVSKTVQVKIPAGVDTGSRLRL 231

Query: 178 VGEGDAGPRGGPPGDLYVYLDVEEIPGIQRDGIDLFSTISISYLDAIMGTVVKVKTVEGI 237
            GEG+AG RGGPPGDLYV+L VE     +RDG D+   + IS++ A +G  ++V T+EG 
Sbjct: 232 RGEGEAGVRGGPPGDLYVFLTVEPHEFFERDGNDVHCKVPISFVQAALGAQIEVPTLEGE 291

Query: 238 SELQVPPGTQPGDVLVLAKKGAPKLNKPSIRGDHLFTVKVTIPNRISAKERELLEELASL 297
            EL++P GTQPGD+     KG P L +   RGD +  V+V +P R++ K+ ELL E A L
Sbjct: 292 RELKIPKGTQPGDIFRFKGKGIPSL-RGGGRGDQIIEVEVKVPTRLTKKQEELLTEFARL 350

Query: 298 RN-TTGSRTRTRPK 310
            +   G++ R   K
Sbjct: 351 ESEKIGNKLRNLFK 364

Length = 366

>gnl|CDD|184599 PRK14277, PRK14277, chaperone protein DnaJ; Provisional

 Score =  240 bits (615), Expect = 1e-76
 Identities = 119/320 (37%), Positives = 171/320 (53%), Gaps = 27/320 (8%)

Query: 2   YDQYGEA----GVKSTVGGGSSAYTTNPFD--------LFETFFGPSMGGFPGMNQTGFR 49
           YDQ+G A    G     G G   +    FD        +FE  FG             F 
Sbjct: 67  YDQFGHAAFDPGGFGQGGFGQGGFGGGGFDFDFGGFGDIFEDIFG-----------DFFG 115

Query: 50  TRRRSTVT---KGEDLRYDIVLEFSESIFGAEKEFELSHLETCEVCTGTGAKMGSKMRIC 106
           T RR   T   KG D+RYD+ L F E+ FG EKE E+   E C+VC G+GAK GSK   C
Sbjct: 116 TGRRRAETGPQKGADIRYDLELTFEEAAFGTEKEIEVERFEKCDVCKGSGAKPGSKPVTC 175

Query: 107 STCGGRGQVMRTDQTPFGLFSQVSVCPSCGGEGEVISEYCRKCSGEGRIRLKKNIKVKVP 166
             C G GQV     TPFG    +  C  C GEG++I++ C KC G GRIR ++ IKV +P
Sbjct: 176 PVCHGTGQVRTRQNTPFGRIVNIRTCDRCHGEGKIITDPCNKCGGTGRIRRRRKIKVNIP 235

Query: 167 PGVSTGSILRVVGEGDAGPRGGPPGDLYVYLDVEEIPGIQRDGIDLFSTISISYLDAIMG 226
            G+  G ++ + GEG+ G +GGP GDLY+ + V+  P  +R+G +++  + I++ DA +G
Sbjct: 236 AGIDDGQMITLRGEGEPGIKGGPNGDLYIVIKVKPHPLFKREGYNVYLEMPITFTDAALG 295

Query: 227 TVVKVKTVEGISELQVPPGTQPGDVLVLAKKGAPKLNKPSIRGDHLFTVKVTIPNRISAK 286
             +++ T++G  +  +P GTQ G    L  KG P L     RGD +  V + +P +++ K
Sbjct: 296 GEIEIPTLDGKVKFTIPEGTQTGTKFRLRGKGIPHLRG-RGRGDQIVKVYIEVPKKLTEK 354

Query: 287 ERELLEELASLRNTTGSRTR 306
           ++ELL E   L    G+ +R
Sbjct: 355 QKELLREFEKLSGEEGTESR 374

Length = 386

>gnl|CDD|184611 PRK14297, PRK14297, chaperone protein DnaJ; Provisional

 Score =  239 bits (612), Expect = 3e-76
 Identities = 122/297 (41%), Positives = 171/297 (57%), Gaps = 17/297 (5%)

Query: 2   YDQYGEAGVKSTVGGGSSAYTTNPF-------DLFETFFGPSMGGFPGMNQTGFRTRRRS 54
           YDQ+G A      G GS  +    F       D+F++FFG   GGF      G  +RRR+
Sbjct: 66  YDQFGTADFNGAGGFGSGGFGGFDFSDMGGFGDIFDSFFG---GGF------GSSSRRRN 116

Query: 55  TVTKGEDLRYDIVLEFSESIFGAEKEFELSHLETCEVCTGTGAKMGSKMRICSTCGGRGQ 114
              +G D+ Y I L F E++FG EKE  ++  E CE C GTGAK G+  + C  CGG GQ
Sbjct: 117 GPQRGADIEYTINLTFEEAVFGVEKEISVTRNENCETCNGTGAKPGTSPKTCDKCGGTGQ 176

Query: 115 VMRTDQTPFGLFSQVSVCPSCGGEGEVISEYCRKCSGEGRIRLKKNIKVKVPPGVSTGSI 174
           +     TP G F   + C  CGG G+VI + C KC G+G++R  + IKV VP GV TG++
Sbjct: 177 IRVQRNTPLGSFVSTTTCDKCGGSGKVIEDPCNKCHGKGKVRKNRKIKVNVPAGVDTGNV 236

Query: 175 LRVVGEGDAGPRGGPPGDLYVYLDVEEIPGIQRDGIDLFSTISISYLDAIMGTVVKVKTV 234
           + + G+G+ G  GGP GDLY+ + V      +R G D++    IS+  A +GT +KV TV
Sbjct: 237 IPLRGQGEHGKNGGPTGDLYINIRVAPHKTFKRKGFDIYIDKHISFAKAALGTEIKVPTV 296

Query: 235 EGISELQVPPGTQPGDVLVLAKKGAPKLNKPSIRGDHLFTVKVTIPNRISAKERELL 291
           +G  + +VP GTQPG V  L  KG P++N    RG+   TV V IP ++++K++E L
Sbjct: 297 DGEVKYEVPAGTQPGTVFRLKGKGVPRVNSTG-RGNQYVTVIVDIPKKLNSKQKEAL 352

Length = 380

>gnl|CDD|184603 PRK14282, PRK14282, chaperone protein DnaJ; Provisional

 Score =  233 bits (596), Expect = 5e-74
 Identities = 122/303 (40%), Positives = 166/303 (54%), Gaps = 9/303 (2%)

Query: 1   MYDQYG---EAGVKSTVGGGSSAYTTNPFDLFETFFGPSMGG-FPGMNQTGFRTRRRSTV 56
           MYD++G   E         G   +  + F  FE  F   +   F G  +T  +  +R   
Sbjct: 66  MYDRFGYVGEQPPYQETESGGGFFE-DIFKDFENIFNRDIFDIFFGERRT--QEEQREYA 122

Query: 57  TKGEDLRYDIVLEFSESIFGAEKEFELSHLETCEVCTGTGAKMGSKMRICSTCGGRGQVM 116
            +GED+RY+I +  S+ I GAE   E    ETC  C GTG + GS    C  C G G++ 
Sbjct: 123 RRGEDIRYEIEVTLSDLINGAEIPVEYDRYETCPHCGGTGVEPGSGYVTCPKCHGTGRIR 182

Query: 117 RTDQTPFGLFSQVSVCPSCGGEGEVISEYCRKCSGEGRIRLKKNIKVKVPPGVSTGSILR 176
              ++ FG+F     C  CGG G++  EYC +C G GRIR +    VK+P GV  G++LR
Sbjct: 183 EERRSFFGVFVSERTCERCGGTGKIPGEYCHECGGSGRIRRRVRTTVKIPAGVEDGTVLR 242

Query: 177 VVGEGDAGPRGGPPGDLYVYLDVEEIPGIQRDGIDLFSTISISYLDAIMGTVVKVKTVEG 236
           + G G+AG  GGP GDLYV + V   P  +R G DL   ++I YL AI+GT V+V   EG
Sbjct: 243 ITGGGNAGYYGGPYGDLYVIVRVRPDPRFKRSGSDLIYDVTIDYLQAILGTTVEVPLPEG 302

Query: 237 -ISELQVPPGTQPGDVLVLAKKGAPKLNKPSIRGDHLFTVKVTIPNRISAKERELLEELA 295
             + L++PPGTQP  V  L  KG P + +   RGD +  V V IP R+S +ER+LL+ELA
Sbjct: 303 GTTMLKIPPGTQPETVFRLKGKGLPNM-RYGRRGDLIVNVHVEIPKRLSREERKLLKELA 361

Query: 296 SLR 298
             R
Sbjct: 362 KKR 364

Length = 369

>gnl|CDD|237668 PRK14301, PRK14301, chaperone protein DnaJ; Provisional

 Score =  226 bits (579), Expect = 2e-71
 Identities = 116/300 (38%), Positives = 160/300 (53%), Gaps = 19/300 (6%)

Query: 2   YDQYGEAGVKSTVGGGSSAYTTNPF----DLFETFFGPSMGGFPGMNQTGFRTRRRSTVT 57
           YD++G AGV    G G  +   + F    D+F   FG S GG          +RR     
Sbjct: 66  YDRFGHAGVNGNGGFGGFSSAEDIFSHFSDIFGDLFGFSGGG----------SRRGPRPQ 115

Query: 58  KGEDLRYDIVLEFSESIFGAEKEFELSHLETCEVCTGTGAKMGSKMRICSTCGGRGQVMR 117
            G DLRY++ + F ++  G E    +    TC+ C G+GA  G+    C  CGG GQV +
Sbjct: 116 AGSDLRYNLTVSFRQAAKGDEVTLRIPKNVTCDDCGGSGAAPGTSPETCRHCGGSGQVRQ 175

Query: 118 TDQTPFGLFSQVSVCPSCGGEGEVISEYCRKCSGEGRIRLKKNIKVKVPPGVSTGSILRV 177
           +     G F     CP C GEG VI+  C KC G G ++  + +KV++P GV TGS LR+
Sbjct: 176 SQ----GFFQIAVPCPVCRGEGRVITHPCPKCKGSGIVQQTRELKVRIPAGVDTGSRLRL 231

Query: 178 VGEGDAGPRGGPPGDLYVYLDVEEIPGIQRDGIDLFSTISISYLDAIMGTVVKVKTVEGI 237
            GEG+ G  GGPPGDLYV + VE+    QR G DL  T  IS++ A +G  ++V T++  
Sbjct: 232 RGEGEPGVHGGPPGDLYVVITVEDDKIFQRQGQDLVVTQEISFVQAALGDRIEVPTLDDP 291

Query: 238 SELQVPPGTQPGDVLVLAKKGAPKLNKPSIRGDHLFTVKVTIPNRISAKERELLEELASL 297
             L +P GTQ G+V  L  KG P L   S +GD L  V V  P +++ ++ ELL E  +L
Sbjct: 292 VTLDIPKGTQSGEVFRLRGKGLPYLGS-SQKGDLLVEVSVVTPTKLTKRQEELLREFEAL 350

Length = 373

>gnl|CDD|237653 PRK14276, PRK14276, chaperone protein DnaJ; Provisional

 Score =  226 bits (577), Expect = 5e-71
 Identities = 114/298 (38%), Positives = 156/298 (52%), Gaps = 12/298 (4%)

Query: 2   YDQYGEAGVKSTVGGGSSAY----TTNPFDLFETFFGPSMGGFPGMNQTGFRTRRRSTVT 57
           YDQYG AG     GGG+  +     +  F  FE  F    GG       G   R  +   
Sbjct: 65  YDQYGAAGANGGFGGGAGGFGGFDGSGGFGGFEDIFSSFFGG-------GGARRNPNAPR 117

Query: 58  KGEDLRYDIVLEFSESIFGAEKEFELSHLETCEVCTGTGAKMGSKMRICSTCGGRGQVMR 117
           +G+DL+Y + L+F E+IFG EKE   +   TC  C G+GAK G+    C  C G G +  
Sbjct: 118 QGDDLQYRVNLDFEEAIFGKEKEVSYNREATCHTCNGSGAKPGTSPVTCGKCHGSGVITV 177

Query: 118 TDQTPFGLFSQVSVCPSCGGEGEVISEYCRKCSGEGRIRLKKNIKVKVPPGVSTGSILRV 177
             QTP G+  +   C  C G G+ I E C+ C G G  +    + VK+P GV TG  +R+
Sbjct: 178 DTQTPLGMMRRQVTCDVCHGTGKEIKEPCQTCHGTGHEKQAHTVSVKIPAGVETGQQIRL 237

Query: 178 VGEGDAGPRGGPPGDLYVYLDVEEIPGIQRDGIDLFSTISISYLDAIMGTVVKVKTVEGI 237
            G+G+AG  GGP GDLYV   VE     +RDG  ++ T+ IS++ A +G  V+V TV G 
Sbjct: 238 QGQGEAGFNGGPYGDLYVVFRVEPSKKFERDGSTIYYTLPISFVQAALGDTVEVPTVHGD 297

Query: 238 SELQVPPGTQPGDVLVLAKKGAPKLNKPSIRGDHLFTVKVTIPNRISAKERELLEELA 295
            EL++P GTQ G    L  KGAPKL      GD   TV +  P +++  ++E L+  A
Sbjct: 298 VELKIPAGTQTGKKFRLRGKGAPKLRGGGN-GDQHVTVNIVTPTKLNDAQKEALKAFA 354

Length = 380

>gnl|CDD|184604 PRK14283, PRK14283, chaperone protein DnaJ; Provisional

 Score =  222 bits (568), Expect = 9e-70
 Identities = 115/297 (38%), Positives = 166/297 (55%), Gaps = 7/297 (2%)

Query: 2   YDQYGEAGVKSTVGGGSSAYTTNPFDLFETFFGPSMGGFPGM-NQTGFRTRRRSTVTKGE 60
           YDQ+G AG+     G S     N  + FE  F     G   + +  GF    R    +G 
Sbjct: 66  YDQFGHAGMD----GFSQEDIFNNIN-FEDIFQGFGFGIGNIFDMFGFGGGSRHGPQRGA 120

Query: 61  DLRYDIVLEFSESIFGAEKEFELSHLETCEVCTGTGAKMGSKMRICSTCGGRGQVMRTDQ 120
           D+  ++ +   E+  G EK+ ++ H + C VC G+ A+ GS+++ C TCGG GQV +   
Sbjct: 121 DIYTEVEITLEEAASGVEKDIKVRHTKKCPVCNGSRAEPGSEVKTCPTCGGTGQVKQVRN 180

Query: 121 TPFGLFSQVSVCPSCGGEGEVISEYCRKCSGEGRIRLKKNIKVKVPPGVSTGSILRVVGE 180
           T  G    V+ CP C GEG+++ + C  C G+G +R  K I VK+P GV TGS LRV GE
Sbjct: 181 TILGQMMNVTTCPDCQGEGKIVEKPCSNCHGKGVVRETKTISVKIPAGVETGSRLRVSGE 240

Query: 181 GDAGPRGGPPGDLYVYLDVEEIPGIQRDGIDLFSTISISYLDAIMGTVVKVKTVEGISEL 240
           G+ G RGG PGDLYV + V+     +R+G +L+    IS++ A +G  V V T++G  EL
Sbjct: 241 GEMGDRGGEPGDLYVVIKVKPHKIFRREGANLYYEKPISFVQAALGDTVDVPTIDGPVEL 300

Query: 241 QVPPGTQPGDVLVLAKKGAPKLNKPSIRGDHLFTVKVTIPNRISAKERELLEELASL 297
           ++P GTQ G    L   G P L   S +G+    VKV +P ++S K++ELL E AS+
Sbjct: 301 KIPAGTQSGTTFRLKGHGMPSLRW-SGKGNLYVKVKVVVPKKLSPKQKELLREFASI 356

Length = 378

>gnl|CDD|237656 PRK14280, PRK14280, chaperone protein DnaJ; Provisional

 Score =  221 bits (566), Expect = 2e-69
 Identities = 117/303 (38%), Positives = 162/303 (53%), Gaps = 21/303 (6%)

Query: 2   YDQYGEAGVKSTVGGGSSAYTTNPF-------DLFETFFGPSMGGFPGMNQTGFRTRRRS 54
           YDQ+G AG     GGG   +    F       D+F +FFG            G R R  +
Sbjct: 65  YDQFGHAGPNQGFGGG--GFGGGDFGGGFGFEDIFSSFFG-----------GGGRRRDPN 111

Query: 55  TVTKGEDLRYDIVLEFSESIFGAEKEFELSHLETCEVCTGTGAKMGSKMRICSTCGGRGQ 114
              +G DL+Y + L F E++FG EKE E+   ETC+ C G+GAK G+    CS CGG GQ
Sbjct: 112 APRQGADLQYTMTLTFEEAVFGKEKEIEIPKEETCDTCHGSGAKPGTSKETCSHCGGSGQ 171

Query: 115 VMRTDQTPFGLFSQVSVCPSCGGEGEVISEYCRKCSGEGRIRLKKNIKVKVPPGVSTGSI 174
           V     TPFG       CP C G G+ I E C  C G+G++R +K I VK+P GV  G  
Sbjct: 172 VSVEQNTPFGRVVNRQTCPHCNGTGQEIKEKCPTCHGKGKVRKRKKINVKIPAGVDNGQQ 231

Query: 175 LRVVGEGDAGPRGGPPGDLYVYLDVEEIPGIQRDGIDLFSTISISYLDAIMGTVVKVKTV 234
           +RV GEG+ G  GGP GDLYV   V      +RDG D++  + +++  A +G  ++V T+
Sbjct: 232 IRVSGEGEPGVNGGPAGDLYVVFRVRPHEFFERDGDDIYCEMPLTFAQAALGDEIEVPTL 291

Query: 235 EGISELQVPPGTQPGDVLVLAKKGAPKLNKPSIRGDHLFTVKVTIPNRISAKERELLEEL 294
            G  +L++P GTQ G    L  KG P +     +GD    V+V  P +++ +++ELL E 
Sbjct: 292 HGKVKLKIPAGTQTGTQFRLKGKGVPNVRGYG-QGDQYVVVRVVTPTKLTDRQKELLREF 350

Query: 295 ASL 297
           A L
Sbjct: 351 AEL 353

Length = 376

>gnl|CDD|237657 PRK14281, PRK14281, chaperone protein DnaJ; Provisional

 Score =  221 bits (565), Expect = 5e-69
 Identities = 118/310 (38%), Positives = 163/310 (52%), Gaps = 22/310 (7%)

Query: 2   YDQYGEAGVKSTVG-GGSSAYTTNPFDL------FETFFGPSMGGFPGMNQTGF------ 48
           YDQ+G AGV S+   GG   Y     D       F   FG       G +  GF      
Sbjct: 65  YDQFGHAGVGSSAASGGGPGYGGGGGDFNDIFSAFNDMFGGG-ARRGGGSPFGFEDVFGG 123

Query: 49  --RTRRRSTVTKGEDLRYDIVLEFSESIFGAEKEFELSHLETCEVCTGTGAKMGSKMRIC 106
             R RR S    G DL+  + L   E   G EK  ++     C+ C GTG+K G     C
Sbjct: 124 GGRRRRASAGIPGTDLKIRLKLTLEEIAKGVEKTLKIKKQVPCKECNGTGSKTG-ATETC 182

Query: 107 STCGGRGQVMRTDQTPFGLFSQVSVCPSCGGEGEVISEYCRKCSGEGRIRLKKNIKVKVP 166
            TC G G+V +  +T FG F  ++ CP+CGGEG V+ + C  C GEG  + +  +KV VP
Sbjct: 183 PTCHGSGEVRQASKTMFGQFVNITACPTCGGEGRVVKDRCPACYGEGIKQGEVTVKVTVP 242

Query: 167 PGVSTGSILRVVGEGDAGPRGGPPGDLYVYLDVEEIPG--IQRDGIDLFSTISISYLDAI 224
            GV  G+ L + G+G+AGPRGG PGDL V   +EE P     R+G D+   +++SY D +
Sbjct: 243 AGVQDGNYLTLRGQGNAGPRGGAPGDLIVV--IEEKPHELFVRNGDDVIYNLAVSYPDLV 300

Query: 225 MGTVVKVKTVEGISELQVPPGTQPGDVLVLAKKGAPKLNKPSIRGDHLFTVKVTIPNRIS 284
           +GT V+V T++G  +L +P GTQP  +L +  KG   L     RGD    V V +P  +S
Sbjct: 301 LGTKVEVPTLDGAVKLTIPAGTQPETMLRIPGKGIGHLRGSG-RGDQYVRVNVFVPKEVS 359

Query: 285 AKERELLEEL 294
            +++ELL+EL
Sbjct: 360 HQDKELLKEL 369

Length = 397

>gnl|CDD|184612 PRK14298, PRK14298, chaperone protein DnaJ; Provisional

 Score =  219 bits (560), Expect = 2e-68
 Identities = 115/302 (38%), Positives = 161/302 (53%), Gaps = 18/302 (5%)

Query: 2   YDQYGEAGVKSTVGGGSSAYTTNPF----DLFETFFGPSMGGFPGMNQTGFRTRRRSTVT 57
           YD++G AG+ +        +    F    D+FE FFG            G   R R    
Sbjct: 66  YDRFGHAGIDNQYSA-EDIFRGADFGGFGDIFEMFFG------------GGGRRGRMGPR 112

Query: 58  KGEDLRYDIVLEFSESIFGAEKEFELSHLETCEVCTGTGAKMGSKMRICSTCGGRGQVMR 117
           +G DLRYD+ +   E+ FG  K+ ++   E C  C+GTGAK G+  + C TCGG GQV  
Sbjct: 113 RGSDLRYDLYITLEEAAFGVRKDIDVPRAERCSTCSGTGAKPGTSPKRCPTCGGTGQVTT 172

Query: 118 TDQTPFGLFSQVSVCPSCGGEGEVISEYCRKCSGEGRIRLKKNIKVKVPPGVSTGSILRV 177
           T  TP G F   + C +C G G+VI   C  CSG G++R  + I V VP G  +G  L++
Sbjct: 173 TRSTPLGQFVTTTTCSTCHGRGQVIESPCPVCSGTGKVRKTRKITVNVPAGADSGLRLKL 232

Query: 178 VGEGDAGPRGGPPGDLYVYLDVEEIPGIQRDGIDLFSTISISYLDAIMGTVVKVKTVEGI 237
            GEG+AG  G P GDLY+ L V+E    +R G D+ S I IS+  A +G  + V T+ G 
Sbjct: 233 SGEGEAGSPGAPSGDLYIVLHVKEHDYFERVGDDIISEIPISFTQAALGADIMVPTLYGK 292

Query: 238 SELQVPPGTQPGDVLVLAKKGAPKLNKPSIRGDHLFTVKVTIPNRISAKERELLEELASL 297
            ++ +PPGTQ   V  L  KG P+L+    +GD L  V V  P +++ +++ELL E   L
Sbjct: 293 VKMNIPPGTQTHSVFRLKDKGMPRLHG-HGKGDQLVKVIVKTPTKLTQEQKELLREFDEL 351

Query: 298 RN 299
            N
Sbjct: 352 SN 353

Length = 377

>gnl|CDD|172774 PRK14286, PRK14286, chaperone protein DnaJ; Provisional

 Score =  215 bits (549), Expect = 4e-67
 Identities = 127/311 (40%), Positives = 178/311 (57%), Gaps = 14/311 (4%)

Query: 2   YDQYGEAGVKSTVGG-GSSAYT--TNPFDLFETFFGPSMGGFPGMNQTGFRTRRRSTVTK 58
           YDQ+G+AGV +  GG G  AYT  ++ F  F   FG   GG  G    G    RRS   +
Sbjct: 66  YDQFGKAGVNAGAGGFGQGAYTDFSDIFGDFGDIFGDFFGGGRG---GGSGGGRRSGPQR 122

Query: 59  GEDLRYDIVLEFSESIFGAEKEFELSHLETCEVCTGTGAKMGSKMRICSTCGGRGQVMRT 118
           G DLRY++ +   ++  G E + E+  LE+C  C G+GA  GS    C  CGG GQ+ RT
Sbjct: 123 GSDLRYNLEVSLEDAALGREYKIEIPRLESCVDCNGSGASKGSSPTTCPDCGGSGQIRRT 182

Query: 119 DQTPFGLFSQVSVCPSCGGEGEVISEYCRKCSGEGRIRLKKNIKVKVPPGVSTGSILRVV 178
                G FS  + CP+C G+G VIS  C+ C G+G    ++ I +K+PPGV TGS L+V 
Sbjct: 183 Q----GFFSVATTCPTCRGKGTVISNPCKTCGGQGLQEKRRTINIKIPPGVETGSRLKVS 238

Query: 179 GEGDAGPRGGPPGDLYVYLDVEEIPGIQRDGIDLFSTISISYLDAIMGTVVKVKTVEG-I 237
           GEG+AGP GGP GDLYV   +++    +R G DL     IS   AI+G  ++V T++G  
Sbjct: 239 GEGEAGPNGGPHGDLYVVTHIKKHELFERQGNDLILVRKISLAQAILGAEIEVPTIDGKK 298

Query: 238 SELQVPPGTQPGDVLVLAKKGAPKLNKPSIRGDHLFTVKVTIPNRISAKERELLEELA-- 295
           +++++P GT+ G V  L   G P L     +GD    VK+ IP +I+ ++REL+EE A  
Sbjct: 299 AKMKIPEGTESGQVFRLKGHGMPYLGAYG-KGDQHVIVKIEIPKKITRRQRELIEEFARE 357

Query: 296 SLRNTTGSRTR 306
           S  N  GS+ +
Sbjct: 358 SGENIPGSKGK 368

Length = 372

>gnl|CDD|237654 PRK14278, PRK14278, chaperone protein DnaJ; Provisional

 Score =  211 bits (539), Expect = 2e-65
 Identities = 109/285 (38%), Positives = 151/285 (52%), Gaps = 12/285 (4%)

Query: 15  GGGSSAYTTNPFDLFETFFGPSMGGFPGMNQTGFRTRRRSTVTKGEDLRYDIVLEFSESI 74
           GGG         D+FE FFG            G R R    V  G D    + L+  E  
Sbjct: 78  GGGFGGGFGGLGDVFEAFFGGGAA------SRGPRGR----VRPGSDSLLRMRLDLEECA 127

Query: 75  FGAEKEFELSHLETCEVCTGTGAKMGSKMRICSTCGGRGQVMRTDQTPFGLFSQVSVCPS 134
            G  K+  +     C+ C G G    SK   C TCGGRG+V    ++  G       CP+
Sbjct: 128 TGVTKQVTVDTAVLCDRCHGKGTAGDSKPVTCDTCGGRGEVQTVQRSFLGQVMTSRPCPT 187

Query: 135 CGGEGEVISEYCRKCSGEGRIRLKKNIKVKVPPGVSTGSILRVVGEGDAGPRGGPPGDLY 194
           C G GEVI + C +C+G+GR+R ++ I VK+P GV  G  +R+  +G+ GP GGP GDLY
Sbjct: 188 CRGVGEVIPDPCHECAGDGRVRARREITVKIPAGVGDGMRIRLAAQGEVGPGGGPAGDLY 247

Query: 195 VYLDVEEIPGIQRDGIDLFSTISISYLDAIMGTVVKVKTV-EGISELQVPPGTQPGDVLV 253
           V +  +      RDG DL  T+S+  +DA +GT V V+ + +G SE+ +PPGTQPG V+ 
Sbjct: 248 VEVHEQPHDVFVRDGDDLHCTVSVPMVDAALGTTVTVEAILDGPSEITIPPGTQPGSVIT 307

Query: 254 LAKKGAPKLNKPSIRGDHLFTVKVTIPNRISAKERELLEELASLR 298
           L  +G P L +   RGD    V+V +P R+  ++ ELL EL +LR
Sbjct: 308 LRGRGMPHL-RSGGRGDLHAHVEVVVPTRLDHEDIELLRELKALR 351

Length = 378

>gnl|CDD|237658 PRK14284, PRK14284, chaperone protein DnaJ; Provisional

 Score =  210 bits (535), Expect = 1e-64
 Identities = 112/309 (36%), Positives = 164/309 (53%), Gaps = 18/309 (5%)

Query: 2   YDQYGEAGVKSTVGGGSSAYTTNPFDLFETF---FGPSMGG-------FPGMNQTGFRTR 51
           YD+YG+ G  +  GG   A   N  D   TF   FG   GG         G     F  R
Sbjct: 63  YDRYGKDGPFAGAGGFGGAGMGNMEDALRTFMGAFGGEFGGGGSFFEGLFGGLGEAFGMR 122

Query: 52  RRS-TVTKGEDLRYDIVLEFSESIFGAEKEFELSHLETCEVCTGTGAKMGSKMRICSTCG 110
                  +G   +  I L F E+  G EKE  +S  ++C+ C+G+GA     +++C  C 
Sbjct: 123 GGPAGARQGASKKVHITLSFEEAAKGVEKELLVSGYKSCDACSGSGANSSQGIKVCDRCK 182

Query: 111 GRGQVMRTDQTPFGLFSQVSVCPSCGGEGEVISEYCRKCSGEGRIRLKKNIKVKVPPGVS 170
           G GQV+++     G FS  S CP CGGEG VI++ C  C G+GRI+ K+++ V +P GV 
Sbjct: 183 GSGQVVQSR----GFFSMASTCPECGGEGRVITDPCSVCRGQGRIKDKRSVHVHIPAGVD 238

Query: 171 TGSILRVVGEGDAGPRGGPPGDLYVYLDVEEIPGIQRDGIDLFSTISISYLDAIMGTVVK 230
           +G  L++ G GDAG  G P GDLYV++DVE  P  +R G DL   + I ++DA +G   +
Sbjct: 239 SGMRLKMEGYGDAGQNGAPAGDLYVFIDVEPHPVFERRGDDLILELPIGFVDAALGMKKE 298

Query: 231 VKTV--EGISELQVPPGTQPGDVLVLAKKGAPKLNKPSIRGDHLFTVKVTIPNRISAKER 288
           + T+  EG   L +P G Q G +L +  +G P ++    RGD L  + V  P  +S +++
Sbjct: 299 IPTLLKEGTCRLTIPEGIQSGTILKVRGQGFPNVHGKG-RGDLLVRISVETPQNLSEEQK 357

Query: 289 ELLEELASL 297
           ELL + A+ 
Sbjct: 358 ELLRQFAAT 366

Length = 391

>gnl|CDD|237659 PRK14287, PRK14287, chaperone protein DnaJ; Provisional

 Score =  208 bits (531), Expect = 3e-64
 Identities = 113/296 (38%), Positives = 162/296 (54%), Gaps = 12/296 (4%)

Query: 2   YDQYGEAGVKSTVGGGSSAYTTNPFDLFETFFGPSMGGFPGMNQTGFRTRRRSTVTKGED 61
           YDQ+G        GGG +       D+F+ FFG   G            R  +   +G D
Sbjct: 65  YDQFGHTDPNQGFGGGGAGDFGGFSDIFDMFFGGGGG-----------RRNPNAPRQGAD 113

Query: 62  LRYDIVLEFSESIFGAEKEFELSHLETCEVCTGTGAKMGSKMRICSTCGGRGQVMRTDQT 121
           L+Y + LEF E++FG E E E+   ETC  C G+GAK G+K   CS CGG GQ+     T
Sbjct: 114 LQYTMTLEFKEAVFGKETEIEIPREETCGTCHGSGAKPGTKPETCSHCGGSGQLNVEQNT 173

Query: 122 PFGLFSQVSVCPSCGGEGEVISEYCRKCSGEGRIRLKKNIKVKVPPGVSTGSILRVVGEG 181
           PFG      VC  C G G++I + C  C G+G++R +K I VKVP G+  G  LRV G+G
Sbjct: 174 PFGRVVNRRVCHHCEGTGKIIKQKCATCGGKGKVRKRKKINVKVPAGIDHGQQLRVSGQG 233

Query: 182 DAGPRGGPPGDLYVYLDVEEIPGIQRDGIDLFSTISISYLDAIMGTVVKVKTVEGISELQ 241
           +AG  GGPPGDLYV  +V+     +RDG D++  + +++    +G  ++V T+ G  +L+
Sbjct: 234 EAGVNGGPPGDLYVVFNVKPHEFFERDGDDIYCEMPLTFPQVALGDEIEVPTLNGKVKLK 293

Query: 242 VPPGTQPGDVLVLAKKGAPKLNKPSIRGDHLFTVKVTIPNRISAKERELLEELASL 297
           +P GTQ G    L  KG P ++    +GD    V+V  P  ++ KE+EL+ E A +
Sbjct: 294 IPAGTQTGTSFRLRGKGVPNVHGRG-QGDQHVQVRVVTPKNLTEKEKELMREFAGM 348

Length = 371

>gnl|CDD|237660 PRK14289, PRK14289, chaperone protein DnaJ; Provisional

 Score =  207 bits (529), Expect = 8e-64
 Identities = 117/303 (38%), Positives = 165/303 (54%), Gaps = 8/303 (2%)

Query: 2   YDQYGEAGVKSTVGGGS-SAYTTNPFDLFETF---FGPSMGGFPGMNQ-TGFRTRRRSTV 56
           YDQ+G AGV    GGG  S    +  D+F  F   FG   GGF G     G  +++R  V
Sbjct: 67  YDQFGHAGVGGAAGGGGFSGEGMSMEDIFSMFGDIFGGHGGGFGGFGGFGGGGSQQR--V 124

Query: 57  TKGEDLRYDIVLEFSESIFGAEKEFELSHLETCEVCTGTGAKMGSKMRICSTCGGRGQVM 116
            +G DLR  + L   E   G EK+F++     C  C GTGA+  +    C TC G G V 
Sbjct: 125 FRGSDLRVKVKLNLKEISTGVEKKFKVKKYVPCSHCHGTGAEGNNGSETCPTCKGSGSVT 184

Query: 117 RTDQTPFGLFSQVSVCPSCGGEGEVISEYCRKCSGEGRIRLKKNIKVKVPPGVSTGSILR 176
           R   T  G     S CP+C GEG++I + C+KC GEG +  ++ I VK+P GV+ G  L 
Sbjct: 185 RVQNTILGTMQTQSTCPTCNGEGKIIKKKCKKCGGEGIVYGEEVITVKIPAGVAEGMQLS 244

Query: 177 VVGEGDAGPRGGPPGDLYVYLDVEEIPGIQRDGIDLFSTISISYLDAIMGTVVKVKTVEG 236
           + G+G+AG  GG  GDL V ++ E  P + RD  DL   + +S   A +G  V+V T++G
Sbjct: 245 MNGKGNAGKHGGVNGDLLVVIEEEPHPELIRDENDLIYNLLLSVPTAALGGAVEVPTIDG 304

Query: 237 ISELQVPPGTQPGDVLVLAKKGAPKLNKPSIRGDHLFTVKVTIPNRISAKERELLEELAS 296
            +++++  GTQPG VL L  KG P +N     GD L  V V IP  +S +E++ LE++ +
Sbjct: 305 KAKVKIEAGTQPGKVLRLRNKGLPSVNGYG-TGDLLVNVSVYIPETLSKEEKQTLEKMEN 363

Query: 297 LRN 299
             N
Sbjct: 364 SDN 366

Length = 386

>gnl|CDD|237661 PRK14291, PRK14291, chaperone protein DnaJ; Provisional

 Score =  203 bits (518), Expect = 3e-62
 Identities = 104/291 (35%), Positives = 156/291 (53%), Gaps = 19/291 (6%)

Query: 1   MYDQYGEAGVKS--TVGGGSSAYTTNPF----DLFETF---FGPSMGGFPGMNQTGFRTR 51
           +YDQ+G A          G   ++        D+ E     FG     F     T  R +
Sbjct: 63  LYDQFGHAAFSGSGQQQQGQEGFSDFGGGNIEDILEDVFDIFGFG-DIFGRRRATRERRK 121

Query: 52  RRSTVTKGEDLRYDIVLEFSESIFGAEKEFELSHLETCEVCTGTGAKMGSKMRICSTCGG 111
                 KGED+   + +   E+  G     E+     CE C GTG   GS  ++C TCGG
Sbjct: 122 TYQRPVKGEDIYQTVEISLEEAYTGTTVSLEVPRYVPCEACGGTGYDPGSGEKVCPTCGG 181

Query: 112 RGQVMRTDQTPFGLFSQVS-VCPSCGGEGEVISEYCRKCSGEGRIRLKKNIKVKVPPGVS 170
            G++ +      G F ++S  CP+CGGEG V+ E C KC+G G +  K+ IKV++PPGV 
Sbjct: 182 SGEIYQR-----GGFFRISQTCPTCGGEG-VLREPCSKCNGRGLVIKKETIKVRIPPGVD 235

Query: 171 TGSILRVVGEGDAGPRGGPPGDLYVYLDVEEIPGIQRDGIDLFSTISISYLDAIMGTVVK 230
            GS LRV G+G AG  GGPPGDLY+ + V+  P  +R G +L+  ++I+  +A++GT ++
Sbjct: 236 NGSKLRVPGKGHAGRFGGPPGDLYIIVKVKPHPLFERRGDNLYLDVNITVAEAVLGTELE 295

Query: 231 VKTVEGISE-LQVPPGTQPGDVLVLAKKGAPKLNKPSIRGDHLFTVKVTIP 280
           V  ++G  E +++PPGT+ GD + +  KG P+L K S  GD +  V + +P
Sbjct: 296 VPLLDGKKEKVKIPPGTKEGDKIRVPGKGMPRL-KGSGYGDLVVRVHIDVP 345

Length = 382

>gnl|CDD|237662 PRK14292, PRK14292, chaperone protein DnaJ; Provisional

 Score =  194 bits (494), Expect = 8e-59
 Identities = 100/296 (33%), Positives = 150/296 (50%), Gaps = 14/296 (4%)

Query: 2   YDQYGEAGVKSTVGGGS-SAYTTNPFDLFETFFGPSMGGFPGMNQTGFRTRRRSTVTKGE 60
           YD++G A      GG        +P D+FE  FG       G    G R RR     +G+
Sbjct: 63  YDRFGTAPGAGMPGGDPFGGMGFDPMDIFEQLFG-------GAGFGGGRGRRGPA--RGD 113

Query: 61  DLRYDIVLEFSESIFGAEKEFELSHLETCEVCTGTGAKMGSKMR-ICSTCGGRGQVMRTD 119
           DL  +  +   ++  G E E E+  L  CE C G+  + G K    C TC G G V    
Sbjct: 114 DLETEARITLEQARAGEEVEVEVDRLTECEHCHGSRTEPGGKPPKTCPTCRGAGAVRAQA 173

Query: 120 QTPFGLFSQVSVCPSCGGEGEVISEYCRKCSGEGRIRLKKNIKVKVPPGVSTGSILRVVG 179
           +T FG+      CP+C GEG++I++ C  C G GR    + +KVK+P G+  G  +RV G
Sbjct: 174 RTIFGVVETQQPCPTCRGEGQIITDPCTVCRGRGRTLKAETVKVKLPRGIDEGYRIRVAG 233

Query: 180 EGDAGPRGGPPGDLYVYLDVEEIPGIQRDGIDLFSTISISYLDAIMGTVVKVKTVEGISE 239
            G+ GP G   GDLYV++++E  P ++R+   L     I +  A +G  + V T++G   
Sbjct: 234 MGNEGPGGN--GDLYVHIEMEPHPELRREQEHLIYEARIGFAKAALGGQITVPTLDGPQV 291

Query: 240 LQVPPGTQPGDVLVLAKKGAPKLNKPSIRGDHLFTVKVTIPNRISAKERELLEELA 295
           ++V PGTQ GD+  L  +G P+L      GD +   ++ +P ++S + RE LE  A
Sbjct: 292 IEVKPGTQHGDLHRLRGQGMPRLQGAGT-GDLIVEYEIAVPKQLSPEAREALEAYA 346

Length = 371

>gnl|CDD|172788 PRK14300, PRK14300, chaperone protein DnaJ; Provisional

 Score =  187 bits (476), Expect = 3e-56
 Identities = 104/298 (34%), Positives = 157/298 (52%), Gaps = 17/298 (5%)

Query: 2   YDQYGEAGVKSTV----GGGSSAYTTNPFDLFETFFGPSMGGFPGMNQTGFRTRRRSTVT 57
           YD++G    ++      GG    +  +  D+F  FF   MGG         R+R  S+  
Sbjct: 64  YDRFGHDAFQNQQSRGGGGNHGGFHPDINDIFGDFFSDFMGG-------SRRSRPTSSKV 116

Query: 58  KGEDLRYDIVLEFSESIFGAEKEFELSHLETCEVCTGTGAKMGSKMRICSTCGGRGQVMR 117
           +G DL+Y++ +   E+  G EK    S    C+ C G+G++ G  +  C  C G G   R
Sbjct: 117 RGSDLKYNLTINLEEAFHGIEKNISFSSEVKCDTCHGSGSEKGETVTTCDACSGVG-ATR 175

Query: 118 TDQTPFGLFSQVSVCPSCGGEGEVISEYCRKCSGEGRIRLKKNIKVKVPPGVSTGSILRV 177
             Q   G F+    C  C G G++I   C+KC G GR   ++N+ V +P GV  G+ +R 
Sbjct: 176 MQQ---GFFTIEQACHKCQGNGQIIKNPCKKCHGMGRYHKQRNLSVNIPAGVENGTRIRH 232

Query: 178 VGEGDAGPRGGPPGDLYVYLDVEEIPGIQRDGIDLFSTISISYLDAIMGTVVKVKTVEGI 237
            GEG+AG RGG  GDLYV + ++     + DG +L   + IS+++A +G  ++V  +EG 
Sbjct: 233 TGEGEAGIRGGNSGDLYVDIAIKPHDIYKVDGANLHCKLPISFVNAALGGEIEVPVIEGG 292

Query: 238 S-ELQVPPGTQPGDVLVLAKKGAPKLNKPSIRGDHLFTVKVTIPNRISAKERELLEEL 294
              L +P GTQ GD L L  KG  K+ + +IRGD L  + V +P  +S ++RELLEE 
Sbjct: 293 KVNLTIPAGTQNGDQLRLRSKGMSKM-RSTIRGDMLTHIHVEVPKNLSKRQRELLEEF 349

Length = 372

>gnl|CDD|237666 PRK14296, PRK14296, chaperone protein DnaJ; Provisional

 Score =  181 bits (460), Expect = 8e-54
 Identities = 98/312 (31%), Positives = 156/312 (50%), Gaps = 27/312 (8%)

Query: 2   YDQYGEAGVKSTVGGGSSAYTTNPFDLFETFFGPSMGGFPGMNQT---------GFRTRR 52
           YDQ+G A        GSS +++N F  FE  F  +MG     + T              +
Sbjct: 65  YDQFGHAAFD-----GSSGFSSN-FGDFEDLFS-NMGSSGFSSFTNIFSDFFGSNKSDYQ 117

Query: 53  RSTVTKGEDLRYDIVLEFSESIFGAEKEFELSHLETCEVCTGTGAKMGSKMRICSTCGGR 112
           RST  KG+ +  DI L F E +FG +K  EL  L  C  C G+GA+  S + IC+ C G 
Sbjct: 118 RST--KGQSVSLDIYLTFKELLFGVDKIIELDLLTNCSKCFGSGAESNSDIHICNNCHGT 175

Query: 113 GQVMRTDQTPFGLFSQVSVCPSCGGEGEVISEYCRKCSGEGRIRLKKNIKVKVPPGVSTG 172
           G+V+      F  F Q + C  C G G++I   C+ C G+G+   +K I+V +P G+   
Sbjct: 176 GEVLVQKNMGFFQFQQSAKCNVCNGAGKIIKNKCKNCKGKGKYLERKKIEVNIPKGIRPN 235

Query: 173 SILRVVGEGDAGPRGGPPGDLYVYL-----DVEEIPGIQRDGIDLFSTISISYLDAIMGT 227
             +++  +G A    G  GDL + +      V EI     +  D+  T +ISYLDAI+G 
Sbjct: 236 QQIKLSQKGHASLNNGVNGDLIIDIYLKESKVFEII----NNNDILMTYNISYLDAILGN 291

Query: 228 VVKVKTVEGISELQVPPGTQPGDVLVLAKKGAPKLNKPSIRGDHLFTVKVTIPNRISAKE 287
            + +KT++G  + ++P      +++++  KG  K      RGD +  V + +P  +S KE
Sbjct: 292 EIIIKTLDGDIKYKLPKSINSNELIIINNKGLYKSINKDKRGDLIIKVNIVVPKNLSKKE 351

Query: 288 RELLEELASLRN 299
           +EL+E++    +
Sbjct: 352 KELIEQIYEQTS 363

Length = 372

>gnl|CDD|237665 PRK14295, PRK14295, chaperone protein DnaJ; Provisional

 Score =  179 bits (455), Expect = 8e-53
 Identities = 111/298 (37%), Positives = 156/298 (52%), Gaps = 18/298 (6%)

Query: 5   YGEAGVKSTVGGGSSAYTTNPFDLFETFFGPSMGGFPGMNQTGF---------RTRRRST 55
           +G  G +   GGG        FDL + F G + GG       G          R  RR+ 
Sbjct: 78  FGNGGFRPGPGGGGGG--GFNFDLGDLFGGGAQGGGGAGGGGGLGDVFGGLFNRGGRRTQ 135

Query: 56  VTKGEDLRYDIVLEFSESIFGAEKEFELSHLETCEVCTGTGAKMGSKMRICSTCGGRGQV 115
             +G D+  ++ L F+E+I GA     L+    C  C+GTGAK G+  R+C TC G GQV
Sbjct: 136 PRRGADVESEVTLSFTEAIDGATVPLRLTSQAPCPACSGTGAKNGTTPRVCPTCSGTGQV 195

Query: 116 MRTDQTPFGLFSQVSVCPSCGGEGEVISEYCRKCSGEGRIRLKKNIKVKVPPGVSTGSIL 175
            R      G FS    CP C G G +  + C  C G GR +  + ++V++P GVS G  +
Sbjct: 196 SRN----SGGFSLSEPCPDCKGRGLIADDPCLVCKGSGRAKSSRTMQVRIPAGVSDGQRI 251

Query: 176 RVVGEGDAGPRGGPPGDLYVYLDVEEIPGIQRDGIDLFSTISISYLDAIMGTVVKVKTVE 235
           R+ G+G  G RGGP GDLYV + V+  P   R G +L  T+ +++ +A +G  V+V T+ 
Sbjct: 252 RLRGKGAPGERGGPAGDLYVVVHVDPHPVFGRSGDNLTVTVPVTFPEAALGAEVRVPTLG 311

Query: 236 GIS-ELQVPPGTQPGDVLVLAKKGAPKLNKPSIRGDHLFTVKVTIPNRISAKERELLE 292
           G    +++PPGT  G VL +  KGA +  K   RGD L TV+V +P  +S K RE LE
Sbjct: 312 GPPVTVKLPPGTPNGRVLRVRGKGAVR--KDGTRGDLLVTVEVAVPKDLSGKAREALE 367

Length = 389

>gnl|CDD|237655 PRK14279, PRK14279, chaperone protein DnaJ; Provisional

 Score =  175 bits (446), Expect = 2e-51
 Identities = 100/295 (33%), Positives = 147/295 (49%), Gaps = 13/295 (4%)

Query: 15  GGGSSAYTTNPFDLFETFFGPSMGG-------FPGMNQTGFRTRRRSTVTKGEDLRYDIV 67
           GG  +      F+L + F     GG       F G+   G  + R S   +G DL  +  
Sbjct: 95  GGFGTGGDGAEFNLNDLFDAAGRGGGGGIGDLFGGLFNRGGGSARPSRPRRGNDLETETT 154

Query: 68  LEFSESIFGAEKEFELSHLETCEVCTGTGAKMGSKMRICSTCGGRGQVMRTDQTPFGLFS 127
           L+F E+  G      L+    C  C G+GA+ G+  ++C TC G G + R +Q  FG FS
Sbjct: 155 LDFVEAAKGVTMPLRLTSPAPCTTCHGSGARPGTSPKVCPTCNGSGVISR-NQGAFG-FS 212

Query: 128 QVSVCPSCGGEGEVISEYCRKCSGEGRIRLKKNIKVKVPPGVSTGSILRVVGEGDAGPRG 187
           +   C  C G G +I + C +C G G     + I V++PPGV  G  +R+ G+G+AG RG
Sbjct: 213 EP--CTDCRGTGSIIEDPCEECKGTGVTTRTRTINVRIPPGVEDGQRIRLAGQGEAGLRG 270

Query: 188 GPPGDLYVYLDVEEIPGIQRDGIDLFSTISISYLDAIMGTVVKVKTVEGISELQVPPGTQ 247
            P GDLYV + V       RDG DL  T+ +S+ +  +G+ + V T++G   ++VP GT 
Sbjct: 271 APSGDLYVTVHVRPDKVFGRDGDDLTVTVPVSFTELALGSTLSVPTLDGPVGVKVPAGTA 330

Query: 248 PGDVLVLAKKGAPKLNKPSIRGDHLFTVKVTIPNRISAKERELLEELASLRNTTG 302
            G +L +  +G PK  +    GD L TVKV +P  +     E LE  A     +G
Sbjct: 331 DGRILRVRGRGVPK--RSGGAGDLLVTVKVAVPPNLDGAAAEALEAYAEAERASG 383

Length = 392

>gnl|CDD|199909 cd10747, DnaJ_C, C-terminal substrate binding domain of DnaJ and HSP40

 Score =  162 bits (414), Expect = 2e-49
 Identities = 64/130 (49%), Positives = 85/130 (65%), Gaps = 1/130 (0%)

Query: 154 RIRLKKNIKVKVPPGVSTGSILRVVGEGDAGPRGGPPGDLYVYLDVEEIPGIQRDGIDLF 213
           R+R KK + VK+P GV  G  LR+ GEGDAGP GGPPGDLYV + V+  P  +RDG DL+
Sbjct: 30  RVREKKTLTVKIPAGVDDGQRLRLRGEGDAGPNGGPPGDLYVVIRVKPHPVFRRDGNDLY 89

Query: 214 STISISYLDAIMGTVVKVKTVEGISELQVPPGTQPGDVLVLAKKGAPKLNKPSIRGDHLF 273
             + IS  +A++G  ++V T+ G  +L++PPGTQPG VL L  KG P+L     RGD   
Sbjct: 90  CEVPISLTEALLGGEIEVPTLGGKVKLKIPPGTQPGTVLRLKGKGMPRLR-GGGRGDLYV 148

Query: 274 TVKVTIPNRI 283
            VKV  P ++
Sbjct: 149 EVKVEFPKKL 158

The C-terminal region of the DnaJ/Hsp40 protein mediates oligomerization and binding to denatured polypeptide substrate. DnaJ/Hsp40 is a widely conserved heat-shock protein. It prevents the aggregation of unfolded substrate and forms a ternary complex with both substrate and DnaK/Hsp70; the N-terminal J-domain of DnaJ/Hsp40 stimulates the ATPase activity of DnaK/Hsp70. Length = 158

>gnl|CDD|172778 PRK14290, PRK14290, chaperone protein DnaJ; Provisional

 Score =  165 bits (418), Expect = 9e-48
 Identities = 105/303 (34%), Positives = 150/303 (49%), Gaps = 23/303 (7%)

Query: 1   MYDQYGEAGVKSTVGGGSSAYTTNPF-------DLFETFFGPSMGGFPGMNQTGFRTRRR 53
            YDQ G        G G S +  + F       D+F   FG   G F     +GF   ++
Sbjct: 65  QYDQTG----TVDFGAGGSNFNWDNFTHFSDINDIFNQIFG---GNFGSDFFSGF-GNQQ 116

Query: 54  STVTKGEDL--RYDIVLEFSESIFGAEKEFELSHLETCEVCTGTGAKMGSKMRICSTCGG 111
           ST     D+    DI LE  ++ +G EK  +      C  C+GTGAK G K+  C TC G
Sbjct: 117 STRNIDLDIYTNLDISLE--DAYYGTEKRIKYRRNAMCPDCSGTGAKNG-KLITCPTCHG 173

Query: 112 RGQVMRTDQTPFGLFSQVSVCPSCGGEGEVISEYCRKCSGEGRIRLKKNIKVKVPPGVST 171
            GQ        F     V+ C +CGG G +  E C +C+G G + + ++I VK+P G + 
Sbjct: 174 TGQQRIVRGQGFFRMVTVTTCRTCGGRGRIPEEKCPRCNGTGTVVVNEDISVKIPKGATD 233

Query: 172 GSILRVVGEGDAGPRGGPPGDLYVYLDVEEIPGIQRDGIDLFSTISISYLDAIMGTVVKV 231
              LRV G+G +   GG  GDLYV L V   P IQR   DL+    I++  A +G  +++
Sbjct: 234 NLRLRVKGKGQS--YGGRTGDLYVVLRVNNDPNIQRINDDLYVDQKINFPQAALGGEIEI 291

Query: 232 KTVEGISELQVPPGTQPGDVLVLAKKGAPKLNKPSIRGDHLFTVKVTIPNRISAKERELL 291
           K       L++P GTQPG+VL +   G P LN     GD L  + V +P R+++K++EL+
Sbjct: 292 KLFREKYNLKIPEGTQPGEVLKIKGAGMPHLNGHG-SGDLLVRINVEVPKRLTSKQKELI 350

Query: 292 EEL 294
            E 
Sbjct: 351 REF 353

Length = 365

>gnl|CDD|172773 PRK14285, PRK14285, chaperone protein DnaJ; Provisional

 Score =  142 bits (359), Expect = 3e-39
 Identities = 83/298 (27%), Positives = 157/298 (52%), Gaps = 15/298 (5%)

Query: 2   YDQYGEAGVKSTVGGGSSAYTT--NPF-DLFETFFGPSMGGFPGMNQTGFRTRRRSTVTK 58
           YD++G    +   GGG   ++   + F D+FE F G     F   N+   + R+     K
Sbjct: 65  YDRFGHTAFEG--GGGFEGFSGGFSGFSDIFEDF-GDIFDSFFTGNRGQDKNRKHE---K 118

Query: 59  GEDLRYDIVLEFSESIFGAEKEFELSHLETCEVCTGTGAKMGSKMRICSTCGGRGQVMRT 118
           G+DL Y I +   ++  G +    ++    CE C G  ++ G+   IC+ C G G+VM+ 
Sbjct: 119 GQDLTYQIEISLEDAYLGYKNNINITRNMLCESCLGKKSEKGTSPSICNMCNGSGRVMQG 178

Query: 119 DQTPFGLFSQVSVCPSCGGEGEVISEYCRKCSGEGRIRLKKNIKVKVPPGVSTGSILRVV 178
                G F   + CP C G G++IS  C+ C G+G ++ K+ I++K+P G+     +++ 
Sbjct: 179 G----GFFRVTTTCPKCYGNGKIISNPCKSCKGKGSLKKKETIELKIPAGIDDNQQIKMR 234

Query: 179 GEGDAGPRGGPPGDLYVYLDVEEIPGIQRDGIDLFSTISISYLDAIMGTVVKVKTVEGIS 238
           G+G   P     GDLY+ + ++     +R+G DL++T+ IS+  A +G  +K++T+    
Sbjct: 235 GKGSVNPDNQQYGDLYIKILIKPHKIFKRNGKDLYATLPISFTQAALGKEIKIQTIASKK 294

Query: 239 -ELQVPPGTQPGDVLVLAKKGAPKLNKPSIRGDHLFTVKVTIPNRISAKERELLEELA 295
            ++++P GT+  + +++  +G P L+     G+ +  +K+  P  +++   +LLE L+
Sbjct: 295 IKIKIPKGTENDEQIIIKNEGMPILHTEKF-GNLILIIKIKTPKNLNSNAIKLLENLS 351

Length = 365

>gnl|CDD|172776 PRK14288, PRK14288, chaperone protein DnaJ; Provisional

 Score =  119 bits (298), Expect = 2e-30
 Identities = 84/296 (28%), Positives = 144/296 (48%), Gaps = 19/296 (6%)

Query: 1   MYDQYGEAGVKSTVGGGSSAYTTNPFDLFETFFGPSMGGFPGMNQTGFRTRRRSTVTKGE 60
           +YD+YG+ G+     G S +  ++ F+   +FF  + G        G R  +R   +   
Sbjct: 64  LYDRYGKKGLNQ--AGASQSDFSDFFEDLGSFFEDAFG-------FGARGSKRQKSSIAP 114

Query: 61  DLRYDIVLEFSESIFGAEKEFELSHLETCEVCTGTGAKMGSKMRICSTCGGRGQV-MRTD 119
           D    I L F E++FG +K  ++ +   CE C GTGAK    +  C  C G+GQV MR  
Sbjct: 115 DYLQTIELSFKEAVFGCKKTIKVQYQSVCESCDGTGAK-DKALETCKQCNGQGQVFMRQ- 172

Query: 120 QTPFGLFSQVSVCPSCGGEGEVISEYCRKCSGEGRIRLKKNIKVKVPPGVSTGSILRVVG 179
               G  S    C +C G+G++I   C+ C G+  I   + I   +P G+   + + +  
Sbjct: 173 ----GFMSFAQTCGACQGKGKIIKTPCQACKGKTYILKDEEIDAIIPEGIDDQNRMVLKN 228

Query: 180 EGDAGPRGGPPGDLYVYLDVEEIPGIQRDGIDLFSTISISYLDAIMGTVVKVKTVEGIS- 238
           +G+   + G  GDLY+   V+E    +R+G DLF    + +    +G  +KV +++G   
Sbjct: 229 KGNEYEK-GKRGDLYLEARVKEDEHFKREGCDLFIEAPVFFTTIALGHTIKVPSLKGDEL 287

Query: 239 ELQVPPGTQPGDVLVLAKKGAPKLNKPSIRGDHLFTVKVTIPNRISAKERELLEEL 294
           EL++P   +         +G  K  + S RG  +  ++V  P  ++ +++ELLE+L
Sbjct: 288 ELKIPRNARDRQTFAFRNEGV-KHPESSYRGSLIVELQVIYPKSLNKEQQELLEKL 342

Length = 369

>gnl|CDD|240236 PTZ00037, PTZ00037, DnaJ_C chaperone protein; Provisional

 Score =  117 bits (296), Expect = 8e-30
 Identities = 89/346 (25%), Positives = 158/346 (45%), Gaps = 30/346 (8%)

Query: 1   MYDQYGEAGVKSTVGGGSSAYTTNPFDLFETFFGPSMGGFPGMNQTGFRTRRRSTVTKGE 60
           +YD+YGE G++            +  DLF+  FG   GG           R+     +GE
Sbjct: 85  IYDEYGEEGLEGGEQPA------DASDLFDLIFG---GG-----------RKPGGKKRGE 124

Query: 61  DLRYDIVLEFSESIFGAEKEFELSHLETCEVCTGTGAKMGSKMRICSTCGGRGQVMRTDQ 120
           D+   + +   +   GA ++  ++    C  C G G    + +  C  C G+G  ++  Q
Sbjct: 125 DIVSHLKVTLEQIYNGAMRKLAINKDVICANCEGHGGPKDAFVD-CKLCNGQGIRVQIRQ 183

Query: 121 TPFGLFSQVSVCPSCGGEGEVISE--YCRKCSGEGRIRLKKNIKVKVPPGVSTGSILRVV 178
               +    S C SC G+G++I E   C+ CSG+G  + +K ++V +  GV     +   
Sbjct: 184 MGSMIHQTQSTCNSCNGQGKIIPESKKCKNCSGKGVKKTRKILEVNIDKGVPNQHKITFH 243

Query: 179 GEGDAGPRGGPPGDLYVYLDVEEIPGIQRDGIDLFSTISISYLDAIMGTVVKVKTVEG-I 237
           GE D  P    PG++   L+ +     +R+G DLF T  IS  +A+ G V  +  ++G  
Sbjct: 244 GEADEKP-NEIPGNVVFILNEKPHDTFKREGGDLFITKKISLYEALTGFVFYITHLDGRK 302

Query: 238 SELQVPPG--TQPGDVLVLAKKGAPKLNKPSIRGDHLFTVKVTIP--NRISAKERELLEE 293
             +  PPG   +PGD+ V+  +G P    P  +G+   T +V  P   + + +E+E+L+ 
Sbjct: 303 LLVNTPPGEVVKPGDIKVINNEGMPTYKSPFKKGNLYVTFEVIFPVDRKFTNEEKEILKS 362

Query: 294 LASLRNTTGSRTRTRPKTQAATTTSPEASQVGTVAEKNEEPEDQND 339
           L   +N    +     + +  T  + +  +V    +K +  ED++D
Sbjct: 363 LFP-QNPEEKKDLEDTEIEVVTAQNVDPEEVKDRDQKQQYQEDEDD 407

Length = 421

>gnl|CDD|199908 cd10719, DnaJ_zf, Zinc finger domain of DnaJ and HSP40

 Score = 98.5 bits (246), Expect = 6e-26
 Identities = 32/65 (49%), Positives = 42/65 (64%)

Query: 89  CEVCTGTGAKMGSKMRICSTCGGRGQVMRTDQTPFGLFSQVSVCPSCGGEGEVISEYCRK 148
           C  C G+GAK G+K + C TCGG GQV +   T FG F   + CP+CGG G++I + C K
Sbjct: 1   CPTCNGSGAKPGTKPKTCPTCGGSGQVRQVQGTGFGFFQTQTTCPTCGGTGKIIKDPCPK 60

Query: 149 CSGEG 153
           C G+G
Sbjct: 61  CKGKG 65

Central/middle or CxxCxGxG-motif containing domain of DnaJ/Hsp40 (heat shock protein 40). DnaJ proteins are highly conserved and play crucial roles in protein translation, folding, unfolding, translocation, and degradation. They act primarily by stimulating the ATPase activity of Hsp70s, an important chaperonin family. Hsp40 proteins are characterized by the presence of an N-terminal J domain, which mediates the interaction with Hsp70. This central domain contains four repeats of a CxxCxGxG motif and binds to two Zinc ions. It has been implicated in substrate binding. Length = 65

>gnl|CDD|216569 pfam01556, DnaJ_C, DnaJ C terminal domain

 Score = 90.3 bits (225), Expect = 1e-22
 Identities = 32/81 (39%), Positives = 54/81 (66%), Gaps = 1/81 (1%)

Query: 211 DLFSTISISYLDAIMGTVVKVKTVEGIS-ELQVPPGTQPGDVLVLAKKGAPKLNKPSIRG 269
           DL+ T+ IS  +A++G  V+V T++G   ++++P GTQPGD L +  KG P     + RG
Sbjct: 1   DLYVTLPISLKEALLGGTVEVPTLDGRKVKIKIPAGTQPGDKLRIKGKGMPINKGGNGRG 60

Query: 270 DHLFTVKVTIPNRISAKEREL 290
           D + T+ V IP ++S++++EL
Sbjct: 61  DLIVTLNVKIPKKLSSEQKEL 81

This family consists of the C terminal region form the DnaJ protein. Although the function of this region is unknown, it is always found associated with pfam00226 and pfam00684. DnaJ is a chaperone associated with the Hsp70 heat-shock system involved in protein folding and renaturation after stress. Length = 81

>gnl|CDD|237667 PRK14299, PRK14299, chaperone protein DnaJ; Provisional

 Score = 90.4 bits (224), Expect = 1e-20
 Identities = 50/139 (35%), Positives = 82/139 (58%), Gaps = 8/139 (5%)

Query: 159 KNIKVKVPPGVSTGSILRVVGEGDAGPRGGPPGDLYVYLDVEEIPGIQRDGIDLFSTISI 218
           + + V++PPGV  G ++R+ G+G  G      GDLY+ + +   P  + +G DL++T+ +
Sbjct: 156 ERLSVRIPPGVREGQVIRLAGKGRQG------GDLYLVVRLLPHPVFRLEGDDLYATVDV 209

Query: 219 SYLDAIMGTVVKVKTVEGISELQVPPGTQPGDVLVLAKKGAPKLNKPSIRGDHLFTVKVT 278
               A++G  V+V T++G  E+ +PP TQ G  L L  KG P+   P+ RGD    V++T
Sbjct: 210 PAPIAVVGGKVRVMTLDGPVEVTIPPRTQAGRKLRLKGKGWPR--GPAGRGDQYAEVRIT 267

Query: 279 IPNRISAKERELLEELASL 297
           IP R + +E  L ++LA L
Sbjct: 268 IPTRPTPEEERLYKQLAEL 286

Length = 291

>gnl|CDD|216058 pfam00684, DnaJ_CXXCXGXG, DnaJ central domain

 Score = 82.4 bits (204), Expect = 5e-20
 Identities = 30/65 (46%), Positives = 40/65 (61%)

Query: 89  CEVCTGTGAKMGSKMRICSTCGGRGQVMRTDQTPFGLFSQVSVCPSCGGEGEVISEYCRK 148
           C  C GTGAK G K + C  C G GQV++  +TP G+F     CP CGG G++I + C+ 
Sbjct: 1   CPHCHGTGAKPGKKPKTCPQCNGSGQVVKRQRTPGGVFQMQQTCPKCGGTGKIIKDPCKV 60

Query: 149 CSGEG 153
           C G+G
Sbjct: 61  CKGKG 65

The central cysteine-rich (CR) domain of DnaJ proteins contains four repeats of the motif CXXCXGXG where X is any amino acid. The isolated cysteine rich domain folds in zinc dependent fashion. Each set of two repeats binds one unit of zinc. Although this domain has been implicated in substrate binding, no evidence of specific interaction between the isolated DNAJ cysteine rich domain and various hydrophobic peptides has been found. Length = 65

>gnl|CDD|182347 PRK10266, PRK10266, curved DNA-binding protein CbpA; Provisional

 Score = 76.0 bits (187), Expect = 2e-15
 Identities = 44/137 (32%), Positives = 69/137 (50%), Gaps = 3/137 (2%)

Query: 159 KNIKVKVPPGVSTGSILRVVGEGDAGPRGGPPGDLYVYLDVEEIPGIQRDGIDLFSTISI 218
           K + VK+P GV  G  +R+ G+G  G  GGP GDL++ + +   P     G DL   + +
Sbjct: 158 KTLNVKIPAGVGNGQRIRLKGQGTPGENGGPNGDLWLVIHIAPHPLFDIVGQDLEIVVPL 217

Query: 219 SYLDAIMGTVVKVKTVEGISELQVPPGTQPGDVLVLAKKGAPKLNKPSIRGDHLFTVKVT 278
           +  +A +G  V V T++    L +PPG+Q G  L +  KG   L      GD    +K+ 
Sbjct: 218 APWEAALGAKVTVPTLKESILLTIPPGSQAGQRLRVKGKG---LVSKKQTGDLYAVLKIV 274

Query: 279 IPNRISAKERELLEELA 295
           +P +   K   L ++LA
Sbjct: 275 MPPKPDEKTAALWQQLA 291

Length = 306

>gnl|CDD|199909 cd10747, DnaJ_C, C-terminal substrate binding domain of DnaJ and HSP40

 Score = 59.7 bits (146), Expect = 7e-11
 Identities = 50/173 (28%), Positives = 68/173 (39%), Gaps = 47/173 (27%)

Query: 60  EDLRYDIVLEFSESIFGAEKEFELSHLETCEVCTGT-------GAKMGSKMRICSTCGGR 112
            DLRYD+ L   E+ FG EKE ++    T      T       G   G ++R+     G 
Sbjct: 1   ADLRYDLELTLEEAYFGKEKEIKIPRKVTRVREKKTLTVKIPAGVDDGQRLRL----RGE 56

Query: 113 GQVMRTDQTPFGLFSQVSVCPS----------------------CGGEGEVISEYCRKCS 150
           G        P  L+  + V P                        GGE EV +       
Sbjct: 57  GDAGPNGGPPGDLYVVIRVKPHPVFRRDGNDLYCEVPISLTEALLGGEIEVPT------- 109

Query: 151 GEGRIRLKKNIKVKVPPGVSTGSILRVVGEGDAGPRGGPPGDLYVYLDVEEIP 203
                 L   +K+K+PPG   G++LR+ G+G    RGG  GDLYV + V E P
Sbjct: 110 ------LGGKVKLKIPPGTQPGTVLRLKGKGMPRLRGGGRGDLYVEVKV-EFP 155

The C-terminal region of the DnaJ/Hsp40 protein mediates oligomerization and binding to denatured polypeptide substrate. DnaJ/Hsp40 is a widely conserved heat-shock protein. It prevents the aggregation of unfolded substrate and forms a ternary complex with both substrate and DnaK/Hsp70; the N-terminal J-domain of DnaJ/Hsp40 stimulates the ATPase activity of DnaK/Hsp70. Length = 158

>gnl|CDD|216569 pfam01556, DnaJ_C, DnaJ C terminal domain

 Score = 42.2 bits (100), Expect = 2e-05
 Identities = 18/46 (39%), Positives = 26/46 (56%), Gaps = 2/46 (4%)

Query: 159 KNIKVKVPPGVSTGSILRVVGEG-DAGPRGGPPGDLYVYLDVEEIP 203
           + +K+K+P G   G  LR+ G+G      G   GDL V L+V +IP
Sbjct: 27  RKVKIKIPAGTQPGDKLRIKGKGMPINKGGNGRGDLIVTLNV-KIP 71

This family consists of the C terminal region form the DnaJ protein. Although the function of this region is unknown, it is always found associated with pfam00226 and pfam00684. DnaJ is a chaperone associated with the Hsp70 heat-shock system involved in protein folding and renaturation after stress. Length = 81

>gnl|CDD|199909 cd10747, DnaJ_C, C-terminal substrate binding domain of DnaJ and HSP40

 Score = 38.6 bits (91), Expect = 0.001
 Identities = 18/75 (24%), Positives = 27/75 (36%), Gaps = 9/75 (12%)

Query: 211 DLFSTISISYLDAIMGTVVKVK------TVEGISELQV--PPGTQPGDVLVLAKKGAPKL 262
           DL   + ++  +A  G   ++K       V     L V  P G   G  L L  +G    
Sbjct: 2   DLRYDLELTLEEAYFGKEKEIKIPRKVTRVREKKTLTVKIPAGVDDGQRLRLRGEGDAGP 61

Query: 263 NKPSIRGDHLFTVKV 277
           N     GD    ++V
Sbjct: 62  NG-GPPGDLYVVIRV 75

The C-terminal region of the DnaJ/Hsp40 protein mediates oligomerization and binding to denatured polypeptide substrate. DnaJ/Hsp40 is a widely conserved heat-shock protein. It prevents the aggregation of unfolded substrate and forms a ternary complex with both substrate and DnaK/Hsp70; the N-terminal J-domain of DnaJ/Hsp40 stimulates the ATPase activity of DnaK/Hsp70. Length = 158

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	363
COG0484	371	DnaJ DnaJ-class molecular chaperone with C-termina	100.0
PRK14296	372	chaperone protein DnaJ; Provisional	100.0
PRK14276	380	chaperone protein DnaJ; Provisional	100.0
PRK14278	378	chaperone protein DnaJ; Provisional	100.0
PRK14297	380	chaperone protein DnaJ; Provisional	100.0
PRK14298	377	chaperone protein DnaJ; Provisional	100.0
PRK14280	376	chaperone protein DnaJ; Provisional	100.0
PRK14287	371	chaperone protein DnaJ; Provisional	100.0
PRK14277	386	chaperone protein DnaJ; Provisional	100.0
PRK14281	397	chaperone protein DnaJ; Provisional	100.0
PRK14284	391	chaperone protein DnaJ; Provisional	100.0
PRK14286	372	chaperone protein DnaJ; Provisional	100.0
PRK14288	369	chaperone protein DnaJ; Provisional	100.0
PRK14285	365	chaperone protein DnaJ; Provisional	100.0
PTZ00037	421	DnaJ_C chaperone protein; Provisional	100.0
PRK14300	372	chaperone protein DnaJ; Provisional	100.0
PRK14282	369	chaperone protein DnaJ; Provisional	100.0
PRK14294	366	chaperone protein DnaJ; Provisional	100.0
PRK14295	389	chaperone protein DnaJ; Provisional	100.0
PRK14301	373	chaperone protein DnaJ; Provisional	100.0
PRK14279	392	chaperone protein DnaJ; Provisional	100.0
PRK10767	371	chaperone protein DnaJ; Provisional	100.0
TIGR02349	354	DnaJ_bact chaperone protein DnaJ. This model repre	100.0
PRK14289	386	chaperone protein DnaJ; Provisional	100.0
PRK14292	371	chaperone protein DnaJ; Provisional	100.0
PRK14293	374	chaperone protein DnaJ; Provisional	100.0
PRK14283	378	chaperone protein DnaJ; Provisional	100.0
PRK14291	382	chaperone protein DnaJ; Provisional	100.0
PRK14290	365	chaperone protein DnaJ; Provisional	100.0
KOG0712	337	consensus Molecular chaperone (DnaJ superfamily) [	100.0
PRK14299	291	chaperone protein DnaJ; Provisional	100.0
PRK10266	306	curved DNA-binding protein CbpA; Provisional	100.0
TIGR03835	871	termin_org_DnaJ terminal organelle assembly protei	100.0
KOG0715	288	consensus Molecular chaperone (DnaJ superfamily) [	99.89
PF01556	81	CTDII: DnaJ C terminal domain; InterPro: IPR002939	99.88
KOG0713	336	consensus Molecular chaperone (DnaJ superfamily) [	99.76
PF00684	66	DnaJ_CXXCXGXG: DnaJ central domain; InterPro: IPR0	99.63
PRK10767	371	chaperone protein DnaJ; Provisional	99.56
COG0484	371	DnaJ DnaJ-class molecular chaperone with C-termina	99.54
PRK14288	369	chaperone protein DnaJ; Provisional	99.52
PRK14282	369	chaperone protein DnaJ; Provisional	99.51
PRK14290	365	chaperone protein DnaJ; Provisional	99.49
PRK14298	377	chaperone protein DnaJ; Provisional	99.45
PRK14294	366	chaperone protein DnaJ; Provisional	99.44
PRK14285	365	chaperone protein DnaJ; Provisional	99.43
PRK14300	372	chaperone protein DnaJ; Provisional	99.41
PRK14284	391	chaperone protein DnaJ; Provisional	99.4
PRK14301	373	chaperone protein DnaJ; Provisional	99.39
PRK14287	371	chaperone protein DnaJ; Provisional	99.38
PRK14278	378	chaperone protein DnaJ; Provisional	99.38
PRK14286	372	chaperone protein DnaJ; Provisional	99.38
PRK14292	371	chaperone protein DnaJ; Provisional	99.36
TIGR02349	354	DnaJ_bact chaperone protein DnaJ. This model repre	99.35
PRK14276	380	chaperone protein DnaJ; Provisional	99.35
PRK14281	397	chaperone protein DnaJ; Provisional	99.34
PRK14279	392	chaperone protein DnaJ; Provisional	99.33
PRK14280	376	chaperone protein DnaJ; Provisional	99.32
PRK14293	374	chaperone protein DnaJ; Provisional	99.32
PRK14297	380	chaperone protein DnaJ; Provisional	99.32
PRK14277	386	chaperone protein DnaJ; Provisional	99.31
PRK14289	386	chaperone protein DnaJ; Provisional	99.31
PRK14295	389	chaperone protein DnaJ; Provisional	99.29
PRK14283	378	chaperone protein DnaJ; Provisional	99.27
PRK14296	372	chaperone protein DnaJ; Provisional	99.27
PRK14291	382	chaperone protein DnaJ; Provisional	99.26
PTZ00037	421	DnaJ_C chaperone protein; Provisional	99.24
PRK14299	291	chaperone protein DnaJ; Provisional	98.94
PF01556	81	CTDII: DnaJ C terminal domain; InterPro: IPR002939	98.94
PLN03165	111	chaperone protein dnaJ-related; Provisional	98.93
PRK10266	306	curved DNA-binding protein CbpA; Provisional	98.74
KOG0712	337	consensus Molecular chaperone (DnaJ superfamily) [	98.58
KOG0714	306	consensus Molecular chaperone (DnaJ superfamily) [	98.5
TIGR02642	186	phage_xxxx uncharacterized phage protein. This unc	98.35
TIGR03835	871	termin_org_DnaJ terminal organelle assembly protei	98.0
PF00684	66	DnaJ_CXXCXGXG: DnaJ central domain; InterPro: IPR0	97.9
COG1107	715	Archaea-specific RecJ-like exonuclease, contains D	97.78
KOG2813	406	consensus Predicted molecular chaperone, contains	97.4
PLN03165	111	chaperone protein dnaJ-related; Provisional	96.94
TIGR02642	186	phage_xxxx uncharacterized phage protein. This unc	96.43
COG1107	715	Archaea-specific RecJ-like exonuclease, contains D	96.38
KOG2813	406	consensus Predicted molecular chaperone, contains	94.57
KOG0715	288	consensus Molecular chaperone (DnaJ superfamily) [	93.21
TIGR00310	192	ZPR1_znf ZPR1 zinc finger domain.	89.3
TIGR00340	163	zpr1_rel ZPR1-related zinc finger protein. A model	89.28
KOG2824	281	consensus Glutaredoxin-related protein [Posttransl	89.13
KOG2824	281	consensus Glutaredoxin-related protein [Posttransl	84.17
PRK14714	1337	DNA polymerase II large subunit; Provisional	82.54
cd03031	147	GRX_GRX_like Glutaredoxin (GRX) family, GRX-like d	82.46

>COG0484 DnaJ DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones]

Probab=100.00  E-value=1.3e-80  Score=603.89  Aligned_cols=285  Identities=43%  Similarity=0.826  Sum_probs=261.9

Q ss_pred             CcccccccccCCCCCC--CCCCCCCChhhhhhhhhCCCCCCCCCCCCCCCCCCCCCCCCCCCcEEEEEEeehhhhhcCCe
Q 017925            1 MYDQYGEAGVKSTVGG--GSSAYTTNPFDLFETFFGPSMGGFPGMNQTGFRTRRRSTVTKGEDLRYDIVLEFSESIFGAE   78 (363)
Q Consensus         1 ~YD~~G~~g~~~g~gg--~~~g~~~~~~diF~~fFG~~~gg~~~~~~~g~~~~~~~~~~~g~di~~~l~ltlee~~~G~~   78 (363)
                      +|||||++++++++.+  ++++|++++.|||++|||+   +.+       ++++++++++|.|+.+.|+|||+|||+|++
T Consensus        65 ~YD~fG~~~~~~gg~gg~g~~~fgg~~~DIF~~~FgG---g~~-------~~~~~~~~~rG~Dl~~~l~isleEa~~G~~  134 (371)
T COG0484          65 AYDQFGHAGFKAGGFGGFGFGGFGGDFGDIFEDFFGG---GGG-------GRRRPNRPRRGADLRYNLEITLEEAVFGVK  134 (371)
T ss_pred             HhhccCccccccCCcCCCCcCCCCCCHHHHHHHhhcC---CCc-------ccCCCCCcccCCceEEEEEeEhhhhccCce
Confidence            5999999999743322  2334444689999999972   111       123344578999999999999999999999


Q ss_pred             EEEEEeeeEeccCCCCCceeeCceeeeCCCCccccEEEEeeeCCCcceeeeecCCCCCcccEEeceeeeecCCCcEEeec
Q 017925           79 KEFELSHLETCEVCTGTGAKMGSKMRICSTCGGRGQVMRTDQTPFGLFSQVSVCPSCGGEGEVISEYCRKCSGEGRIRLK  158 (363)
Q Consensus        79 ~~i~~~~~~~C~~C~GsG~~~g~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~vi~~~C~~C~G~G~v~~~  158 (363)
                      ++|.+++.+.|++|+|+|+++++.+.+|++|+|+|++.+.+++  |.|+++++|++|+|+|++|+++|.+|+|.|++++.
T Consensus       135 ~~i~~~~~~~C~~C~GsGak~gt~~~tC~tC~G~G~v~~~~~~--g~~~~~~~C~~C~G~G~~i~~pC~~C~G~G~v~~~  212 (371)
T COG0484         135 KEIRVTRSVTCSTCHGSGAKPGTDPKTCPTCNGSGQVRTVQRT--GFFSFQQTCPTCNGTGKIIKDPCGKCKGKGRVKKK  212 (371)
T ss_pred             eeEecceeeECCcCCCCCCCCCCCCCcCCCCCCcCeEEEEEee--eEEEEEEECCCCccceeECCCCCCCCCCCCeEeee
Confidence            9999999999999999999999999999999999999888888  89999999999999999999999999999999999


Q ss_pred             eEEEEEeCCCCCCCcEEEEccCcCCCCCCCCCccEEEEEEEEeccccccCCcceeEEEEeceEEeecCcEEEEeccCceE
Q 017925          159 KNIKVKVPPGVSTGSILRVVGEGDAGPRGGPPGDLYVYLDVEEIPGIQRDGIDLFSTISISYLDAIMGTVVKVKTVEGIS  238 (363)
Q Consensus       159 ~~l~V~IP~Gv~~G~~irl~G~G~~~~~g~~~GDL~V~i~v~~h~~f~R~G~DL~~~~~I~l~eAllG~~~~v~tldG~~  238 (363)
                      ++|+|+||||+++|++|+++|+|+++++++++|||||+|+|++|+.|+|+|+|||++++|++++|+||++++||||||.+
T Consensus       213 ~~i~V~IPaGv~~g~~ir~~g~G~~g~~Ggp~GDLyv~i~v~~h~~F~R~g~dL~~~~~Is~~~AalG~~i~vptl~g~~  292 (371)
T COG0484         213 KSISVNIPAGVDDGDRIRLSGEGEAGPNGGPAGDLYVFVHVKPHPIFERDGDDLYCEVPISFTEAALGGEIEVPTLDGRV  292 (371)
T ss_pred             eEEEEECCCCCccCCEEEEecCcccCCCCCCCccEEEEEEeecCCCeEECCCceEeccccCHHHHhcCCEEEEEecCCCE
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEecCCCCCCCcEEEEccCCCCCCCCCCCCccEEEEEEEEcCCCCCHHHHHHHHHHHhhc
Q 017925          239 ELQVPPGTQPGDVLVLAKKGAPKLNKPSIRGDHLFTVKVTIPNRISAKERELLEELASLR  298 (363)
Q Consensus       239 ~l~ip~gtq~g~~~~l~g~G~P~~~~~~~rGDL~V~~~V~~P~~l~~~q~~ll~~l~~~~  298 (363)
                      +|+||||||+|++++|+|+|||++++. .+|||||+|+|++|++|+.+|++||++|++..
T Consensus       293 ~l~ip~Gtq~G~~~rl~gkG~p~~~~~-~~GDl~v~v~v~~P~~ls~~q~~lL~~~~~~~  351 (371)
T COG0484         293 KLKIPAGTQTGEVFRLRGKGMPKLRSG-GRGDLYVRVKVETPKNLSDEQKELLEEFAKSL  351 (371)
T ss_pred             EEecCCCCccCcEEEEcCCCccccCCC-CcCCEEEEEEEEcCCCCCHHHHHHHHHHHHhh
Confidence            999999999999999999999998764 67999999999999999999999999999866

>PRK14296 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=4.9e-67  Score=518.87  Aligned_cols=285  Identities=31%  Similarity=0.610  Sum_probs=249.1

Q ss_pred             CcccccccccCCCC--CCCCCCC----------C-CChhhhhhhhhCCCCCCCCCCCCCCCCCCCCCCCCCCCcEEEEEE
Q 017925            1 MYDQYGEAGVKSTV--GGGSSAY----------T-TNPFDLFETFFGPSMGGFPGMNQTGFRTRRRSTVTKGEDLRYDIV   67 (363)
Q Consensus         1 ~YD~~G~~g~~~g~--gg~~~g~----------~-~~~~diF~~fFG~~~gg~~~~~~~g~~~~~~~~~~~g~di~~~l~   67 (363)
                      +||+||+++++++.  ++++++|          + .++.|+|++|||+   +. +         +.+++++++|+++.|.
T Consensus        64 ~YD~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~f~d~f~~~fgg---g~-~---------~~~~~~~g~di~~~l~  130 (372)
T PRK14296         64 QYDQFGHAAFDGSSGFSSNFGDFEDLFSNMGSSGFSSFTNIFSDFFGS---NK-S---------DYQRSTKGQSVSLDIY  130 (372)
T ss_pred             hhhhccchhhcCCCCcCcCCCccccccccccccccccchhhhhhhcCC---Cc-c---------CCCCcCCCCCeEEEee
Confidence            59999998876421  1111111          0 1344677777752   10 0         1122457899999999


Q ss_pred             eehhhhhcCCeEEEEEeeeEeccCCCCCceeeCceeeeCCCCccccEEEEeeeCCCcceeeeecCCCCCcccEEeceeee
Q 017925           68 LEFSESIFGAEKEFELSHLETCEVCTGTGAKMGSKMRICSTCGGRGQVMRTDQTPFGLFSQVSVCPSCGGEGEVISEYCR  147 (363)
Q Consensus        68 ltlee~~~G~~~~i~~~~~~~C~~C~GsG~~~g~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~vi~~~C~  147 (363)
                      |||+|+|+|++++|.+.+.+.|..|+|+|++.+....+|+.|+|+|.++..+++++.+++++++|+.|+|+|+++.++|+
T Consensus       131 ltlee~~~G~~~~i~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~g~~~~q~~~~C~~C~G~G~~~~~~C~  210 (372)
T PRK14296        131 LTFKELLFGVDKIIELDLLTNCSKCFGSGAESNSDIHICNNCHGTGEVLVQKNMGFFQFQQSAKCNVCNGAGKIIKNKCK  210 (372)
T ss_pred             ccHHHhhCCeeEEEEEeeeeccCCCCCCccCCCCCCccCCCCCCCceEEEEEeccceEEEEEecCCCcCCcceeeccccc
Confidence            99999999999999999999999999999999988999999999999988888776556666899999999999999999


Q ss_pred             ecCCCcEEeeceEEEEEeCCCCCCCcEEEEccCcCCCCCCCCCccEEEEEEEEeccccccC-CcceeEEEEeceEEeecC
Q 017925          148 KCSGEGRIRLKKNIKVKVPPGVSTGSILRVVGEGDAGPRGGPPGDLYVYLDVEEIPGIQRD-GIDLFSTISISYLDAIMG  226 (363)
Q Consensus       148 ~C~G~G~v~~~~~l~V~IP~Gv~~G~~irl~G~G~~~~~g~~~GDL~V~i~v~~h~~f~R~-G~DL~~~~~I~l~eAllG  226 (363)
                      .|+|.|++++.++++|+||||+++|++|+|+|+|++.+.++.+|||||+|++++|+.|+|+ |+|||++++|+|.|||||
T Consensus       211 ~C~G~g~v~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDL~v~v~v~~h~~F~R~~G~DL~~~~~Isl~eAllG  290 (372)
T PRK14296        211 NCKGKGKYLERKKIEVNIPKGIRPNQQIKLSQKGHASLNNGVNGDLIIDIYLKESKVFEIINNNDILMTYNISYLDAILG  290 (372)
T ss_pred             CCCCceEEEEEEEEEEEECCCCCCCCEEEEeccccCCCCCCCCccEEEEEEEeCCCCEEEeCCCcEEEEEecCHHHHhCC
Confidence            9999999999999999999999999999999999998777889999999999999999995 899999999999999999


Q ss_pred             cEEEEeccCceEEEecCCCCCCCcEEEEccCCCCCCCCCCCCccEEEEEEEEcCCCCCHHHHHHHHHHHhhc
Q 017925          227 TVVKVKTVEGISELQVPPGTQPGDVLVLAKKGAPKLNKPSIRGDHLFTVKVTIPNRISAKERELLEELASLR  298 (363)
Q Consensus       227 ~~~~v~tldG~~~l~ip~gtq~g~~~~l~g~G~P~~~~~~~rGDL~V~~~V~~P~~l~~~q~~ll~~l~~~~  298 (363)
                      ++++|+||||+++|+||++||||++++|+|+|||...+++.+|||||+|+|+||+.|+++|+++|++|++.+
T Consensus       291 ~~~~i~tldG~~~v~ip~~t~~g~~~ri~GkGmP~~~~~~~~GDL~V~~~V~~P~~Ls~~q~~~l~~l~~~~  362 (372)
T PRK14296        291 NEIIIKTLDGDIKYKLPKSINSNELIIINNKGLYKSINKDKRGDLIIKVNIVVPKNLSKKEKELIEQIYEQT  362 (372)
T ss_pred             CEEEeeCCCCCEEEEECCccCCCcEEEEcCCCCCcCCCCCCcCCEEEEEEEECCCCCCHHHHHHHHHHHhhc
Confidence            999999999998999999999999999999999965444568999999999999999999999999999764

>PRK14276 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=1.2e-66  Score=517.71  Aligned_cols=285  Identities=40%  Similarity=0.761  Sum_probs=254.5

Q ss_pred             CcccccccccCCCCCC---CCCCCC-----CChhhhhhhhhCCCCCCCCCCCCCCCCCCCCCCCCCCCcEEEEEEeehhh
Q 017925            1 MYDQYGEAGVKSTVGG---GSSAYT-----TNPFDLFETFFGPSMGGFPGMNQTGFRTRRRSTVTKGEDLRYDIVLEFSE   72 (363)
Q Consensus         1 ~YD~~G~~g~~~g~gg---~~~g~~-----~~~~diF~~fFG~~~gg~~~~~~~g~~~~~~~~~~~g~di~~~l~ltlee   72 (363)
                      +||+||+++++++.++   ++++|.     .++.|||++|||++  +  +       .+...++++++|+.+.|.|||+|
T Consensus        64 ~YD~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~f~~~fgg~--~--~-------~~~~~~~~~g~di~~~l~vtLee  132 (380)
T PRK14276         64 AYDQYGAAGANGGFGGGAGGFGGFDGSGGFGGFEDIFSSFFGGG--G--A-------RRNPNAPRQGDDLQYRVNLDFEE  132 (380)
T ss_pred             hHhhcCCccccCCCCCCCCCCCCccccccccchhhHHHHHhCcc--c--c-------ccCcCCCCCCCCEEEEEEEEHHH
Confidence            5999999988643211   111221     24568999999731  1  0       00112245789999999999999


Q ss_pred             hhcCCeEEEEEeeeEeccCCCCCceeeCceeeeCCCCccccEEEEeeeCCCcceeeeecCCCCCcccEEeceeeeecCCC
Q 017925           73 SIFGAEKEFELSHLETCEVCTGTGAKMGSKMRICSTCGGRGQVMRTDQTPFGLFSQVSVCPSCGGEGEVISEYCRKCSGE  152 (363)
Q Consensus        73 ~~~G~~~~i~~~~~~~C~~C~GsG~~~g~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~vi~~~C~~C~G~  152 (363)
                      +|+|++++|.+.+.+.|+.|+|+|++.+....+|+.|+|+|.++..+++++|+++++++|+.|+|+|+++.++|..|+|.
T Consensus       133 ~~~G~~~~i~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~~~~~~C~~C~G~  212 (380)
T PRK14276        133 AIFGKEKEVSYNREATCHTCNGSGAKPGTSPVTCGKCHGSGVITVDTQTPLGMMRRQVTCDVCHGTGKEIKEPCQTCHGT  212 (380)
T ss_pred             hcCCeEEEEEeeccccCCCCcCcccCCCCCCccCCCCCCeeEEEEEEecCCceEEEEEECCCCCCCCccccCCCCCCCCc
Confidence            99999999999999999999999999998889999999999999999999999999999999999999999999999999


Q ss_pred             cEEeeceEEEEEeCCCCCCCcEEEEccCcCCCCCCCCCccEEEEEEEEeccccccCCcceeEEEEeceEEeecCcEEEEe
Q 017925          153 GRIRLKKNIKVKVPPGVSTGSILRVVGEGDAGPRGGPPGDLYVYLDVEEIPGIQRDGIDLFSTISISYLDAIMGTVVKVK  232 (363)
Q Consensus       153 G~v~~~~~l~V~IP~Gv~~G~~irl~G~G~~~~~g~~~GDL~V~i~v~~h~~f~R~G~DL~~~~~I~l~eAllG~~~~v~  232 (363)
                      |++.+.++++|+||+|+.+|++|+|+|+|++.+.+.++|||||+|+|++|+.|+|+|+|||++++|+|.+||+|++++|+
T Consensus       213 g~~~~~~~l~V~Ip~G~~~G~~i~l~G~G~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~v~  292 (380)
T PRK14276        213 GHEKQAHTVSVKIPAGVETGQQIRLQGQGEAGFNGGPYGDLYVVFRVEPSKKFERDGSTIYYTLPISFVQAALGDTVEVP  292 (380)
T ss_pred             eEEEEEEEEEEEeCCCccCCcEEEEeccccCCCCCCCCcCEEEEEEEEECcceeeecceEEEEEecCHHHHhCCCeEEEE
Confidence            99999999999999999999999999999998777788999999999999999999999999999999999999999999


Q ss_pred             ccCceEEEecCCCCCCCcEEEEccCCCCCCCCCCCCccEEEEEEEEcCCCCCHHHHHHHHHHHhh
Q 017925          233 TVEGISELQVPPGTQPGDVLVLAKKGAPKLNKPSIRGDHLFTVKVTIPNRISAKERELLEELASL  297 (363)
Q Consensus       233 tldG~~~l~ip~gtq~g~~~~l~g~G~P~~~~~~~rGDL~V~~~V~~P~~l~~~q~~ll~~l~~~  297 (363)
                      |+||++.|+||+++++|++++|+|+|||..+. ..+|||||+|+|.||+.|+++|+++|++|++.
T Consensus       293 tldg~i~v~ip~g~~~g~~~~i~g~G~p~~~~-~~~GDL~V~~~v~~P~~l~~~q~~~l~~~~~~  356 (380)
T PRK14276        293 TVHGDVELKIPAGTQTGKKFRLRGKGAPKLRG-GGNGDQHVTVNIVTPTKLNDAQKEALKAFAKA  356 (380)
T ss_pred             cCCCcEEEEECCCCCCCCEEEECCCCcCCCCC-CCCCCEEEEEEEECCCCCCHHHHHHHHHHHhh
Confidence            99999899999999999999999999998654 35799999999999999999999999999864

>PRK14278 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=2.2e-66  Score=515.45  Aligned_cols=286  Identities=38%  Similarity=0.716  Sum_probs=252.4

Q ss_pred             CcccccccccCCCC-CCCCC-CCCCChhhhhhhhhCCCCCCCCCCCCCCCCCCCCCCCCCCCcEEEEEEeehhhhhcCCe
Q 017925            1 MYDQYGEAGVKSTV-GGGSS-AYTTNPFDLFETFFGPSMGGFPGMNQTGFRTRRRSTVTKGEDLRYDIVLEFSESIFGAE   78 (363)
Q Consensus         1 ~YD~~G~~g~~~g~-gg~~~-g~~~~~~diF~~fFG~~~gg~~~~~~~g~~~~~~~~~~~g~di~~~l~ltlee~~~G~~   78 (363)
                      +||+||+++..+++ +++++ +| .++.|+|++|||++  + ++       ++...++++++|+.+.|+|||+|+|+|++
T Consensus        63 ~YD~~G~~~~~~~~~~~g~~~~f-~~~~d~f~~ffgg~--g-~~-------~~~~~~~~~g~d~~~~l~vtLee~~~G~~  131 (378)
T PRK14278         63 IVDLGGDPLESAGGGGGGFGGGF-GGLGDVFEAFFGGG--A-AS-------RGPRGRVRPGSDSLLRMRLDLEECATGVT  131 (378)
T ss_pred             hhhccCCccccccCCCCCCCcCc-CchhHHHHHHhCCC--C-CC-------CCCccCCCCCCCeEEEEEEEHHHhcCCeE
Confidence            59999987443211 11111 22 24568999999731  1 00       01111345799999999999999999999


Q ss_pred             EEEEEeeeEeccCCCCCceeeCceeeeCCCCccccEEEEeeeCCCcceeeeecCCCCCcccEEeceeeeecCCCcEEeec
Q 017925           79 KEFELSHLETCEVCTGTGAKMGSKMRICSTCGGRGQVMRTDQTPFGLFSQVSVCPSCGGEGEVISEYCRKCSGEGRIRLK  158 (363)
Q Consensus        79 ~~i~~~~~~~C~~C~GsG~~~g~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~vi~~~C~~C~G~G~v~~~  158 (363)
                      ++|.+++.+.|+.|+|+|++.+....+|+.|+|+|+++..+++++|+++++++|+.|+|+|+++.++|+.|+|.|++.+.
T Consensus       132 ~~i~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~  211 (378)
T PRK14278        132 KQVTVDTAVLCDRCHGKGTAGDSKPVTCDTCGGRGEVQTVQRSFLGQVMTSRPCPTCRGVGEVIPDPCHECAGDGRVRAR  211 (378)
T ss_pred             EEEEEEeeccCCCCcCccCCCCCCceecCCccCceEEEEEEeccceeEEEEEECCCCCccceeeCCCCCCCCCceeEecc
Confidence            99999999999999999999998899999999999999988999999999999999999999999999999999999999


Q ss_pred             eEEEEEeCCCCCCCcEEEEccCcCCCCCCCCCccEEEEEEEEeccccccCCcceeEEEEeceEEeecCcEEEEecc-Cce
Q 017925          159 KNIKVKVPPGVSTGSILRVVGEGDAGPRGGPPGDLYVYLDVEEIPGIQRDGIDLFSTISISYLDAIMGTVVKVKTV-EGI  237 (363)
Q Consensus       159 ~~l~V~IP~Gv~~G~~irl~G~G~~~~~g~~~GDL~V~i~v~~h~~f~R~G~DL~~~~~I~l~eAllG~~~~v~tl-dG~  237 (363)
                      ++++|+||||+.+|++|+|+|+|++.+.+.++|||||+|++++|+.|+|+|+||+++++|+|.+||+|++++|+|| ++.
T Consensus       212 ~~~~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDL~v~i~~~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~tld~~~  291 (378)
T PRK14278        212 REITVKIPAGVGDGMRIRLAAQGEVGPGGGPAGDLYVEVHEQPHDVFVRDGDDLHCTVSVPMVDAALGTTVTVEAILDGP  291 (378)
T ss_pred             eEEEEEECCCCCCCcEEEEccCcCCCCCCCCCCCEEEEEEECcCCCEEEcCCCEEEEEecCHHHHhcCCeEEEecCCCCe
Confidence            9999999999999999999999999887788999999999999999999999999999999999999999999999 555


Q ss_pred             EEEecCCCCCCCcEEEEccCCCCCCCCCCCCccEEEEEEEEcCCCCCHHHHHHHHHHHhhc
Q 017925          238 SELQVPPGTQPGDVLVLAKKGAPKLNKPSIRGDHLFTVKVTIPNRISAKERELLEELASLR  298 (363)
Q Consensus       238 ~~l~ip~gtq~g~~~~l~g~G~P~~~~~~~rGDL~V~~~V~~P~~l~~~q~~ll~~l~~~~  298 (363)
                      +.|+||+++++|++++|+|+|||..+. ..+|||||+|+|.||+.|+++|+++|++|+.+.
T Consensus       292 i~v~ip~g~~~g~~lrl~g~G~p~~~~-~~~GDL~V~~~V~~P~~Ls~~qk~~l~~~~~~~  351 (378)
T PRK14278        292 SEITIPPGTQPGSVITLRGRGMPHLRS-GGRGDLHAHVEVVVPTRLDHEDIELLRELKALR  351 (378)
T ss_pred             EEEEeCCCcCCCcEEEECCCCCCCCCC-CCCCCEEEEEEEEcCCCCCHHHHHHHHHHHhhc
Confidence            799999999999999999999997654 368999999999999999999999999999754

>PRK14297 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=1.6e-66  Score=517.06  Aligned_cols=288  Identities=41%  Similarity=0.815  Sum_probs=255.6

Q ss_pred             CcccccccccCCCCC---CCCCCCC----CChhhhhhhhhCCCCCCCCCCCCCCCCCCCCCCCCCCCcEEEEEEeehhhh
Q 017925            1 MYDQYGEAGVKSTVG---GGSSAYT----TNPFDLFETFFGPSMGGFPGMNQTGFRTRRRSTVTKGEDLRYDIVLEFSES   73 (363)
Q Consensus         1 ~YD~~G~~g~~~g~g---g~~~g~~----~~~~diF~~fFG~~~gg~~~~~~~g~~~~~~~~~~~g~di~~~l~ltlee~   73 (363)
                      +||+||+++++.+++   +++++|.    .++.|||++|||++++   +.     ++ +..++++|+|+++.|+|||+|+
T Consensus        65 ~yD~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~d~f~~~fgg~~g---~~-----~~-~~~~~~kg~di~~~l~vsLee~  135 (380)
T PRK14297         65 QYDQFGTADFNGAGGFGSGGFGGFDFSDMGGFGDIFDSFFGGGFG---SS-----SR-RRNGPQRGADIEYTINLTFEEA  135 (380)
T ss_pred             chhhcCcccccccCCCCCCCCCCcCcccccchhHHHHHHhccCcc---cc-----cc-ccCCCCCCCCEEEEEEEEHHHh
Confidence            599999998864211   1112221    1456899999974211   10     01 1122457999999999999999


Q ss_pred             hcCCeEEEEEeeeEeccCCCCCceeeCceeeeCCCCccccEEEEeeeCCCcceeeeecCCCCCcccEEeceeeeecCCCc
Q 017925           74 IFGAEKEFELSHLETCEVCTGTGAKMGSKMRICSTCGGRGQVMRTDQTPFGLFSQVSVCPSCGGEGEVISEYCRKCSGEG  153 (363)
Q Consensus        74 ~~G~~~~i~~~~~~~C~~C~GsG~~~g~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~vi~~~C~~C~G~G  153 (363)
                      |+|++++|.+.+.+.|..|+|+|.+++....+|+.|+|+|+++..+++++|+++++++|+.|+|+|.++.++|..|+|.|
T Consensus       136 ~~G~~~~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~~~~~~C~~C~G~g  215 (380)
T PRK14297        136 VFGVEKEISVTRNENCETCNGTGAKPGTSPKTCDKCGGTGQIRVQRNTPLGSFVSTTTCDKCGGSGKVIEDPCNKCHGKG  215 (380)
T ss_pred             cCCeEEEEEeeeeccCCCcccccccCCCcCccCCCccCeEEEEEEEEcCCceeEEEEeCCCCCCCceEcCCCCCCCCCCe
Confidence            99999999999999999999999999988999999999999999899999999999999999999999999999999999


Q ss_pred             EEeeceEEEEEeCCCCCCCcEEEEccCcCCCCCCCCCccEEEEEEEEeccccccCCcceeEEEEeceEEeecCcEEEEec
Q 017925          154 RIRLKKNIKVKVPPGVSTGSILRVVGEGDAGPRGGPPGDLYVYLDVEEIPGIQRDGIDLFSTISISYLDAIMGTVVKVKT  233 (363)
Q Consensus       154 ~v~~~~~l~V~IP~Gv~~G~~irl~G~G~~~~~g~~~GDL~V~i~v~~h~~f~R~G~DL~~~~~I~l~eAllG~~~~v~t  233 (363)
                      ++++.++++|+||||+.+|++|+|+|+|++.+.+.++|||||+|+|++|+.|+|+|+||+++++|+|.+||+|++++|+|
T Consensus       216 ~v~~~~~i~V~Ip~G~~~G~~I~l~g~G~~~~~~~~~GDL~v~v~v~~h~~f~R~G~DL~~~~~Isl~eAl~G~~~~i~~  295 (380)
T PRK14297        216 KVRKNRKIKVNVPAGVDTGNVIPLRGQGEHGKNGGPTGDLYINIRVAPHKTFKRKGFDIYIDKHISFAKAALGTEIKVPT  295 (380)
T ss_pred             EEEeEeEEEEEeCCCCCCCcEEEEecCccCCCCCCCCccEEEEEEEcCCCCEEEeCCCEEEEEEeCHHHHhCCCcEEEEc
Confidence            99999999999999999999999999999987777899999999999999999999999999999999999999999999


Q ss_pred             cCceEEEecCCCCCCCcEEEEccCCCCCCCCCCCCccEEEEEEEEcCCCCCHHHHHHHHHHHhhc
Q 017925          234 VEGISELQVPPGTQPGDVLVLAKKGAPKLNKPSIRGDHLFTVKVTIPNRISAKERELLEELASLR  298 (363)
Q Consensus       234 ldG~~~l~ip~gtq~g~~~~l~g~G~P~~~~~~~rGDL~V~~~V~~P~~l~~~q~~ll~~l~~~~  298 (363)
                      |||++.|+||+++++|++++|+|+|||..+. ..+|||||+|+|.||+.|+++|+++|++|+...
T Consensus       296 ldg~~~v~ip~g~~~g~~~ri~g~G~p~~~~-~~~GDL~v~~~v~~P~~ls~~q~~~l~~~~~~~  359 (380)
T PRK14297        296 VDGEVKYEVPAGTQPGTVFRLKGKGVPRVNS-TGRGNQYVTVIVDIPKKLNSKQKEALTMFMEAS  359 (380)
T ss_pred             CCCcEEEEECCCcCCCCEEEEcCCCcCCCCC-CCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHhc
Confidence            9999899999999999999999999997653 368999999999999999999999999999754

>PRK14298 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=1.6e-66  Score=515.95  Aligned_cols=285  Identities=40%  Similarity=0.766  Sum_probs=254.6

Q ss_pred             CcccccccccCCCCCC--CC--CCCCCChhhhhhhhhCCCCCCCCCCCCCCCCCCCCCCCCCCCcEEEEEEeehhhhhcC
Q 017925            1 MYDQYGEAGVKSTVGG--GS--SAYTTNPFDLFETFFGPSMGGFPGMNQTGFRTRRRSTVTKGEDLRYDIVLEFSESIFG   76 (363)
Q Consensus         1 ~YD~~G~~g~~~g~gg--~~--~g~~~~~~diF~~fFG~~~gg~~~~~~~g~~~~~~~~~~~g~di~~~l~ltlee~~~G   76 (363)
                      +||+||+++++++.++  ++  ++| .++.|+|++|||++  +  +       + ++.++++++|+++.|+|||+|+|+|
T Consensus        65 ~YD~~G~~g~~~~~~~~~~~~~~~~-~~~~d~f~~~Fgg~--~--~-------~-~~~~~~~g~di~~~l~vslee~~~G  131 (377)
T PRK14298         65 QYDRFGHAGIDNQYSAEDIFRGADF-GGFGDIFEMFFGGG--G--R-------R-GRMGPRRGSDLRYDLYITLEEAAFG  131 (377)
T ss_pred             hhhhcCccccccccCcccccccCCc-CcchhhhHhhhcCC--C--c-------c-CCCCCCCCCCEEEEEEEEHHHhhCC
Confidence            5999999888643211  11  122 24568999999731  1  0       0 0122457999999999999999999


Q ss_pred             CeEEEEEeeeEeccCCCCCceeeCceeeeCCCCccccEEEEeeeCCCcceeeeecCCCCCcccEEeceeeeecCCCcEEe
Q 017925           77 AEKEFELSHLETCEVCTGTGAKMGSKMRICSTCGGRGQVMRTDQTPFGLFSQVSVCPSCGGEGEVISEYCRKCSGEGRIR  156 (363)
Q Consensus        77 ~~~~i~~~~~~~C~~C~GsG~~~g~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~vi~~~C~~C~G~G~v~  156 (363)
                      ++++|.+.+.+.|+.|+|+|++.+....+|+.|+|+|+++..+++++|+++++++|+.|+|+|+++.++|..|+|.|++.
T Consensus       132 ~~~~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~  211 (377)
T PRK14298        132 VRKDIDVPRAERCSTCSGTGAKPGTSPKRCPTCGGTGQVTTTRSTPLGQFVTTTTCSTCHGRGQVIESPCPVCSGTGKVR  211 (377)
T ss_pred             eEEEEEEEeeccCCCCCCCcccCCCCCCcCCCCCCccEEEEEEecCceeEEEEEeCCCCCCCCcccCCCCCCCCCccEEE
Confidence            99999999999999999999999998999999999999998888888999888999999999999999999999999999


Q ss_pred             eceEEEEEeCCCCCCCcEEEEccCcCCCCCCCCCccEEEEEEEEeccccccCCcceeEEEEeceEEeecCcEEEEeccCc
Q 017925          157 LKKNIKVKVPPGVSTGSILRVVGEGDAGPRGGPPGDLYVYLDVEEIPGIQRDGIDLFSTISISYLDAIMGTVVKVKTVEG  236 (363)
Q Consensus       157 ~~~~l~V~IP~Gv~~G~~irl~G~G~~~~~g~~~GDL~V~i~v~~h~~f~R~G~DL~~~~~I~l~eAllG~~~~v~tldG  236 (363)
                      +.++++|+||||+++|++|+|+|+|++.+.++++|||||+|++++|+.|+|+|+|||++++|+|.+||+|+++.|+||||
T Consensus       212 ~~~~l~V~IppG~~~G~~i~~~g~G~~~~~~~~~GDL~i~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~tldG  291 (377)
T PRK14298        212 KTRKITVNVPAGADSGLRLKLSGEGEAGSPGAPSGDLYIVLHVKEHDYFERVGDDIISEIPISFTQAALGADIMVPTLYG  291 (377)
T ss_pred             EEEEEEecCCCCCCCCCEEEEecccCCCCCCCCCcCEEEEEEEecCCCeEEEcCcEEEEEEeCHHHHhCCCeEEEecCCC
Confidence            99999999999999999999999999987788999999999999999999999999999999999999999999999999


Q ss_pred             eEEEecCCCCCCCcEEEEccCCCCCCCCCCCCccEEEEEEEEcCCCCCHHHHHHHHHHHhhcC
Q 017925          237 ISELQVPPGTQPGDVLVLAKKGAPKLNKPSIRGDHLFTVKVTIPNRISAKERELLEELASLRN  299 (363)
Q Consensus       237 ~~~l~ip~gtq~g~~~~l~g~G~P~~~~~~~rGDL~V~~~V~~P~~l~~~q~~ll~~l~~~~~  299 (363)
                      ++.|+||+++++|++++|+|+|||..+. ..+|||||+|+|.+|+.|+++|+++|++|+++++
T Consensus       292 ~i~v~ip~g~~~g~~lri~g~G~p~~~~-~~~GDL~V~~~V~~P~~ls~~~~~ll~~l~~~~~  353 (377)
T PRK14298        292 KVKMNIPPGTQTHSVFRLKDKGMPRLHG-HGKGDQLVKVIVKTPTKLTQEQKELLREFDELSN  353 (377)
T ss_pred             CEEEEeCCCcccCCEEEECCCCCCCCCC-CCCCCEEEEEEEECCCCCCHHHHHHHHHHHhhcc
Confidence            9899999999999999999999997654 3689999999999999999999999999997543

>PRK14280 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=2.3e-66  Score=515.09  Aligned_cols=286  Identities=40%  Similarity=0.804  Sum_probs=254.9

Q ss_pred             CcccccccccCCCCCC-CCC--CCC--CChhhhhhhhhCCCCCCCCCCCCCCCCCCCCCCCCCCCcEEEEEEeehhhhhc
Q 017925            1 MYDQYGEAGVKSTVGG-GSS--AYT--TNPFDLFETFFGPSMGGFPGMNQTGFRTRRRSTVTKGEDLRYDIVLEFSESIF   75 (363)
Q Consensus         1 ~YD~~G~~g~~~g~gg-~~~--g~~--~~~~diF~~fFG~~~gg~~~~~~~g~~~~~~~~~~~g~di~~~l~ltlee~~~   75 (363)
                      +||+||+++++++.++ +++  +|.  +++.|+|++|||++  +  .       ++..+++++++|+.+.|.|||+|+|+
T Consensus        64 ~yD~~G~~~~~~~~~~~~~~~~~~~~~~~~~d~f~~~fgg~--~--~-------~~~~~~~~kg~di~~~l~vtLee~~~  132 (376)
T PRK14280         64 QYDQFGHAGPNQGFGGGGFGGGDFGGGFGFEDIFSSFFGGG--G--R-------RRDPNAPRQGADLQYTMTLTFEEAVF  132 (376)
T ss_pred             HHHhcCccccccCcCCCCCCCCCccccccchhhHHHHhCCc--c--c-------cCcccccccccCEEEEEEEEHHHHhC
Confidence            5999999988643211 111  121  25678999999731  1  0       00112245799999999999999999


Q ss_pred             CCeEEEEEeeeEeccCCCCCceeeCceeeeCCCCccccEEEEeeeCCCcceeeeecCCCCCcccEEeceeeeecCCCcEE
Q 017925           76 GAEKEFELSHLETCEVCTGTGAKMGSKMRICSTCGGRGQVMRTDQTPFGLFSQVSVCPSCGGEGEVISEYCRKCSGEGRI  155 (363)
Q Consensus        76 G~~~~i~~~~~~~C~~C~GsG~~~g~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~vi~~~C~~C~G~G~v  155 (363)
                      |++++|.+.+.+.|+.|+|+|++.+....+|+.|+|+|+++..+++++|+++++++|+.|+|+|+++.++|+.|+|.|++
T Consensus       133 G~~~~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v  212 (376)
T PRK14280        133 GKEKEIEIPKEETCDTCHGSGAKPGTSKETCSHCGGSGQVSVEQNTPFGRVVNRQTCPHCNGTGQEIKEKCPTCHGKGKV  212 (376)
T ss_pred             CceeEEEEeeeccCCCCCCcccCCCCCCccCCCCCCEEEEEEEeecCCceEEEEEEcCCCCCCCceecCCCCCCCCceEE
Confidence            99999999999999999999999988889999999999999889999999999999999999999999999999999999


Q ss_pred             eeceEEEEEeCCCCCCCcEEEEccCcCCCCCCCCCccEEEEEEEEeccccccCCcceeEEEEeceEEeecCcEEEEeccC
Q 017925          156 RLKKNIKVKVPPGVSTGSILRVVGEGDAGPRGGPPGDLYVYLDVEEIPGIQRDGIDLFSTISISYLDAIMGTVVKVKTVE  235 (363)
Q Consensus       156 ~~~~~l~V~IP~Gv~~G~~irl~G~G~~~~~g~~~GDL~V~i~v~~h~~f~R~G~DL~~~~~I~l~eAllG~~~~v~tld  235 (363)
                      .+.++++|.||+|+.+|++|+|+|+|++.+.+.++|||||+|+|++|+.|+|+|+|||+++.|+|.|||+|+++.|+|||
T Consensus       213 ~~~~~i~V~Ip~G~~~G~~i~l~G~G~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~tld  292 (376)
T PRK14280        213 RKRKKINVKIPAGVDNGQQIRVSGEGEPGVNGGPAGDLYVVFRVRPHEFFERDGDDIYCEMPLTFAQAALGDEIEVPTLH  292 (376)
T ss_pred             EEEEEEEEEeCCCCcCCcEEEEcccccCCCCCCCCcCEEEEEEEecCCCeEEecCCEEEEEecCHHHHhCCCEEEEecCC
Confidence            99999999999999999999999999998777889999999999999999999999999999999999999999999999


Q ss_pred             ceEEEecCCCCCCCcEEEEccCCCCCCCCCCCCccEEEEEEEEcCCCCCHHHHHHHHHHHhhc
Q 017925          236 GISELQVPPGTQPGDVLVLAKKGAPKLNKPSIRGDHLFTVKVTIPNRISAKERELLEELASLR  298 (363)
Q Consensus       236 G~~~l~ip~gtq~g~~~~l~g~G~P~~~~~~~rGDL~V~~~V~~P~~l~~~q~~ll~~l~~~~  298 (363)
                      |++.|+||+++++|++++|+|+|||..+. ..+|||||+|+|.+|+.||++|+++|++|+++.
T Consensus       293 g~i~v~ip~g~~~g~~~~i~g~G~p~~~~-~~~GDL~v~~~v~~P~~Ls~~q~~~l~~l~~~~  354 (376)
T PRK14280        293 GKVKLKIPAGTQTGTQFRLKGKGVPNVRG-YGQGDQYVVVRVVTPTKLTDRQKELLREFAELS  354 (376)
T ss_pred             ceEEEEECCCCCCCcEEEEcCCCCCCCCC-CCCCCEEEEEEEECCCCCCHHHHHHHHHHHhhc
Confidence            99899999999999999999999997654 368999999999999999999999999998654

>PRK14287 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=2.4e-66  Score=513.96  Aligned_cols=285  Identities=40%  Similarity=0.816  Sum_probs=255.0

Q ss_pred             CcccccccccCCCCCC-CCCCCCCChhhhhhhhhCCCCCCCCCCCCCCCCCCCCCCCCCCCcEEEEEEeehhhhhcCCeE
Q 017925            1 MYDQYGEAGVKSTVGG-GSSAYTTNPFDLFETFFGPSMGGFPGMNQTGFRTRRRSTVTKGEDLRYDIVLEFSESIFGAEK   79 (363)
Q Consensus         1 ~YD~~G~~g~~~g~gg-~~~g~~~~~~diF~~fFG~~~gg~~~~~~~g~~~~~~~~~~~g~di~~~l~ltlee~~~G~~~   79 (363)
                      +||+||+++++++.++ ++++|+ ++.|+|++|||++  +  +       .+..+++++|+|+.+.|+|||+|+|+|+++
T Consensus        64 ~YD~~G~~~~~~~~~~~~~~~f~-~~~d~f~~~fgg~--~--~-------~~~~~~~~~g~d~~~~l~vslee~~~G~~~  131 (371)
T PRK14287         64 HYDQFGHTDPNQGFGGGGAGDFG-GFSDIFDMFFGGG--G--G-------RRNPNAPRQGADLQYTMTLEFKEAVFGKET  131 (371)
T ss_pred             HHHhhCCcccccccCCCCCcccc-chHHHHHhhhccc--c--C-------CCCCCCCCCCCCEEEEEEEEHHHhcCCeEE
Confidence            5999999987643211 112232 4569999999731  1  0       001112357999999999999999999999


Q ss_pred             EEEEeeeEeccCCCCCceeeCceeeeCCCCccccEEEEeeeCCCcceeeeecCCCCCcccEEeceeeeecCCCcEEeece
Q 017925           80 EFELSHLETCEVCTGTGAKMGSKMRICSTCGGRGQVMRTDQTPFGLFSQVSVCPSCGGEGEVISEYCRKCSGEGRIRLKK  159 (363)
Q Consensus        80 ~i~~~~~~~C~~C~GsG~~~g~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~vi~~~C~~C~G~G~v~~~~  159 (363)
                      +|.+.+.+.|+.|+|+|++.+..+.+|+.|+|+|+++..+++++|+++++++|+.|.|+|+++.++|..|.|.+++.+.+
T Consensus       132 ~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~  211 (371)
T PRK14287        132 EIEIPREETCGTCHGSGAKPGTKPETCSHCGGSGQLNVEQNTPFGRVVNRRVCHHCEGTGKIIKQKCATCGGKGKVRKRK  211 (371)
T ss_pred             EEEEeeeccCCCCCCcccCCCCCCcccCCCCCEEEEEEEEecCCceEEEEEeCCCCCCCCccccccCCCCCCeeEEeeeE
Confidence            99999999999999999999888899999999999999999999999999999999999999999999999999999999


Q ss_pred             EEEEEeCCCCCCCcEEEEccCcCCCCCCCCCccEEEEEEEEeccccccCCcceeEEEEeceEEeecCcEEEEeccCceEE
Q 017925          160 NIKVKVPPGVSTGSILRVVGEGDAGPRGGPPGDLYVYLDVEEIPGIQRDGIDLFSTISISYLDAIMGTVVKVKTVEGISE  239 (363)
Q Consensus       160 ~l~V~IP~Gv~~G~~irl~G~G~~~~~g~~~GDL~V~i~v~~h~~f~R~G~DL~~~~~I~l~eAllG~~~~v~tldG~~~  239 (363)
                      +|+|.||||+.+|++|+|+|+|++.+.++.+|||||+|++++|+.|+|+|+|||+++.|+|.+||+|++++|+|+||++.
T Consensus       212 ~l~V~Ip~G~~~G~~i~~~G~G~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~~ldg~i~  291 (371)
T PRK14287        212 KINVKVPAGIDHGQQLRVSGQGEAGVNGGPPGDLYVVFNVKPHEFFERDGDDIYCEMPLTFPQVALGDEIEVPTLNGKVK  291 (371)
T ss_pred             EEEEEECCcCCCCCEEEEccCCcCCCCCCCCccEEEEEEEecCCCEEEecCCeEEEEeccHHHHhCCCEEEEEcCCCCEE
Confidence            99999999999999999999999987777899999999999999999999999999999999999999999999999989


Q ss_pred             EecCCCCCCCcEEEEccCCCCCCCCCCCCccEEEEEEEEcCCCCCHHHHHHHHHHHhhc
Q 017925          240 LQVPPGTQPGDVLVLAKKGAPKLNKPSIRGDHLFTVKVTIPNRISAKERELLEELASLR  298 (363)
Q Consensus       240 l~ip~gtq~g~~~~l~g~G~P~~~~~~~rGDL~V~~~V~~P~~l~~~q~~ll~~l~~~~  298 (363)
                      |+||+++++|++++|+|+|||..+.. .+|||||+|+|.+|+.|+.+|+++|++|+++.
T Consensus       292 v~ip~g~~~g~~~ri~g~G~p~~~~~-~~GDL~V~~~v~~P~~l~~~q~~ll~~l~~~~  349 (371)
T PRK14287        292 LKIPAGTQTGTSFRLRGKGVPNVHGR-GQGDQHVQVRVVTPKNLTEKEKELMREFAGMS  349 (371)
T ss_pred             EEECCCccCCcEEEEcCCCccCCCCC-CCCCEEEEEEEEcCCCCCHHHHHHHHHHHhhh
Confidence            99999999999999999999976543 58999999999999999999999999999653

>PRK14277 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=3e-66  Score=515.94  Aligned_cols=289  Identities=39%  Similarity=0.799  Sum_probs=254.8

Q ss_pred             CcccccccccCCCC-C-CCC--CC-----CC---CChhhhhhhhhCCCCCCCCCCCCCCCCCCCCCCCCCCCcEEEEEEe
Q 017925            1 MYDQYGEAGVKSTV-G-GGS--SA-----YT---TNPFDLFETFFGPSMGGFPGMNQTGFRTRRRSTVTKGEDLRYDIVL   68 (363)
Q Consensus         1 ~YD~~G~~g~~~g~-g-g~~--~g-----~~---~~~~diF~~fFG~~~gg~~~~~~~g~~~~~~~~~~~g~di~~~l~l   68 (363)
                      +||+||+++++.+. + +++  ++     +.   .++.|+|++||++.||+.+        .++..++++++|+++.|+|
T Consensus        66 ~yD~~G~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~f~~~F~~~fgg~~--------~~~~~~~~kg~di~~~l~v  137 (386)
T PRK14277         66 QYDQFGHAAFDPGGFGQGGFGQGGFGGGGFDFDFGGFGDIFEDIFGDFFGTGR--------RRAETGPQKGADIRYDLEL  137 (386)
T ss_pred             HHHhhccccccccccccCCcCCCCccccCccccccchhHHHHHhhcccccCCC--------cCCCCCCCCCCCEEEEEEE
Confidence            59999998876321 1 100  11     11   2345889999975332210        1111224579999999999


Q ss_pred             ehhhhhcCCeEEEEEeeeEeccCCCCCceeeCceeeeCCCCccccEEEEeeeCCCcceeeeecCCCCCcccEEeceeeee
Q 017925           69 EFSESIFGAEKEFELSHLETCEVCTGTGAKMGSKMRICSTCGGRGQVMRTDQTPFGLFSQVSVCPSCGGEGEVISEYCRK  148 (363)
Q Consensus        69 tlee~~~G~~~~i~~~~~~~C~~C~GsG~~~g~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~vi~~~C~~  148 (363)
                      ||+|+|+|++++|.+++.+.|+.|+|+|...+....+|+.|+|+|+++..+++++|+++++++|+.|+|+|+++.++|..
T Consensus       138 tLee~~~G~~~~v~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~~~~~~C~~  217 (386)
T PRK14277        138 TFEEAAFGTEKEIEVERFEKCDVCKGSGAKPGSKPVTCPVCHGTGQVRTRQNTPFGRIVNIRTCDRCHGEGKIITDPCNK  217 (386)
T ss_pred             EHHHHhCCeEEEEEEEeeccCCCCCCCCcCCCCCCccCCCCCCEEEEEEEEeccCceEEEEEECCCCCcceeeccCCCCC
Confidence            99999999999999999999999999999998888999999999999999999999999999999999999999999999


Q ss_pred             cCCCcEEeeceEEEEEeCCCCCCCcEEEEccCcCCCCCCCCCccEEEEEEEEeccccccCCcceeEEEEeceEEeecCcE
Q 017925          149 CSGEGRIRLKKNIKVKVPPGVSTGSILRVVGEGDAGPRGGPPGDLYVYLDVEEIPGIQRDGIDLFSTISISYLDAIMGTV  228 (363)
Q Consensus       149 C~G~G~v~~~~~l~V~IP~Gv~~G~~irl~G~G~~~~~g~~~GDL~V~i~v~~h~~f~R~G~DL~~~~~I~l~eAllG~~  228 (363)
                      |+|.|++++.++++|+||+|+++|++|+|+|+|++.+.+..+|||||+|+|++|+.|+|+|+|||++++|+|.|||||++
T Consensus       218 C~G~g~v~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~  297 (386)
T PRK14277        218 CGGTGRIRRRRKIKVNIPAGIDDGQMITLRGEGEPGIKGGPNGDLYIVIKVKPHPLFKREGYNVYLEMPITFTDAALGGE  297 (386)
T ss_pred             CCCCcEEeeeeEEEEecCCCccCCcEEEEccccccCCCCCCCccEEEEEEEecCCCeEEecCCEEEEEEcCHHHHhCCCE
Confidence            99999999999999999999999999999999999776778999999999999999999999999999999999999999


Q ss_pred             EEEeccCceEEEecCCCCCCCcEEEEccCCCCCCCCCCCCccEEEEEEEEcCCCCCHHHHHHHHHHHhhc
Q 017925          229 VKVKTVEGISELQVPPGTQPGDVLVLAKKGAPKLNKPSIRGDHLFTVKVTIPNRISAKERELLEELASLR  298 (363)
Q Consensus       229 ~~v~tldG~~~l~ip~gtq~g~~~~l~g~G~P~~~~~~~rGDL~V~~~V~~P~~l~~~q~~ll~~l~~~~  298 (363)
                      +.|+||||++.|+||+++++|++++|+|+|||..+.+ .+|||||+|+|.||+.|+++|+++|++|+++.
T Consensus       298 ~~i~tldG~~~v~ip~g~~~g~~~ri~g~G~p~~~~~-~~GDL~v~~~V~~P~~Ls~~qk~~l~~l~~~~  366 (386)
T PRK14277        298 IEIPTLDGKVKFTIPEGTQTGTKFRLRGKGIPHLRGR-GRGDQIVKVYIEVPKKLTEKQKELLREFEKLS  366 (386)
T ss_pred             EEEEcCCCCEEEEECCCCCCCCEEEECCCCCCCCCCC-CCCCEEEEEEEEeCCCCCHHHHHHHHHHHhhc
Confidence            9999999998999999999999999999999976543 68999999999999999999999999998654

>PRK14281 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=2.7e-65  Score=510.62  Aligned_cols=239  Identities=39%  Similarity=0.754  Sum_probs=229.5

Q ss_pred             CCCCcEEEEEEeehhhhhcCCeEEEEEeeeEeccCCCCCceeeCceeeeCCCCccccEEEEeeeCCCcceeeeecCCCCC
Q 017925           57 TKGEDLRYDIVLEFSESIFGAEKEFELSHLETCEVCTGTGAKMGSKMRICSTCGGRGQVMRTDQTPFGLFSQVSVCPSCG  136 (363)
Q Consensus        57 ~~g~di~~~l~ltlee~~~G~~~~i~~~~~~~C~~C~GsG~~~g~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~  136 (363)
                      .+++|+++.|+|||||+|+|++++|.+.+.+.|+.|+|+|++.+ ...+|+.|+|+|++...+++++|+++++++|+.|.
T Consensus       134 ~~g~di~~~l~vtLee~~~G~~~~i~~~r~~~C~~C~G~G~~~~-~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~  212 (397)
T PRK14281        134 IPGTDLKIRLKLTLEEIAKGVEKTLKIKKQVPCKECNGTGSKTG-ATETCPTCHGSGEVRQASKTMFGQFVNITACPTCG  212 (397)
T ss_pred             CCCCCEEEEEEeEHHHHhCCeEEEEEEEeeecCCCCCCcccCCC-CCccCCCCCCCcEEEEEEecccceEEEEEecCCCc
Confidence            57999999999999999999999999999999999999999987 57899999999999999999999999999999999


Q ss_pred             cccEEeceeeeecCCCcEEeeceEEEEEeCCCCCCCcEEEEccCcCCCCCCCCCccEEEEEEEEeccccccCCcceeEEE
Q 017925          137 GEGEVISEYCRKCSGEGRIRLKKNIKVKVPPGVSTGSILRVVGEGDAGPRGGPPGDLYVYLDVEEIPGIQRDGIDLFSTI  216 (363)
Q Consensus       137 G~G~vi~~~C~~C~G~G~v~~~~~l~V~IP~Gv~~G~~irl~G~G~~~~~g~~~GDL~V~i~v~~h~~f~R~G~DL~~~~  216 (363)
                      |+|+++.++|+.|+|.|+++..++++|+||||+++|++|+|+|+|++.+.++++|||||+|++++|+.|+|+|+|||+++
T Consensus       213 G~G~~~~~~C~~C~G~g~v~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDL~i~i~~~~h~~F~R~G~DL~~~~  292 (397)
T PRK14281        213 GEGRVVKDRCPACYGEGIKQGEVTVKVTVPAGVQDGNYLTLRGQGNAGPRGGAPGDLIVVIEEKPHELFVRNGDDVIYNL  292 (397)
T ss_pred             ceeeeeCCCCCCCCCCccEecceEEEEecCCCCCCCCEEEEecccccCCCCCCCCcEEEEEEEcCCCCeEEecCCEEEEE
Confidence            99999999999999999999999999999999999999999999999887788999999999999999999999999999


Q ss_pred             EeceEEeecCcEEEEeccCceEEEecCCCCCCCcEEEEccCCCCCCCCCCCCccEEEEEEEEcCCCCCHHHHHHHHHHHh
Q 017925          217 SISYLDAIMGTVVKVKTVEGISELQVPPGTQPGDVLVLAKKGAPKLNKPSIRGDHLFTVKVTIPNRISAKERELLEELAS  296 (363)
Q Consensus       217 ~I~l~eAllG~~~~v~tldG~~~l~ip~gtq~g~~~~l~g~G~P~~~~~~~rGDL~V~~~V~~P~~l~~~q~~ll~~l~~  296 (363)
                      +|+|.+||+|++++|+||||++.|+||+++++|++++|+|+|||..+. ..+|||||+|+|.||+.||++|+++|++|++
T Consensus       293 ~Isl~eAl~G~~~~i~tldg~i~v~ip~g~~~G~~~ri~g~G~P~~~~-~~~GDL~V~~~V~~P~~Ls~~qk~~l~~l~~  371 (397)
T PRK14281        293 AVSYPDLVLGTKVEVPTLDGAVKLTIPAGTQPETMLRIPGKGIGHLRG-SGRGDQYVRVNVFVPKEVSHQDKELLKELKK  371 (397)
T ss_pred             EecHHHHhcCCeEEeecCCccEEEEeCCccCCCcEEEEcCCCCCCCCC-CCCCCEEEEEEEEcCCCCCHHHHHHHHHHHh
Confidence            999999999999999999999899999999999999999999997654 3689999999999999999999999999986


Q ss_pred             h
Q 017925          297 L  297 (363)
Q Consensus       297 ~  297 (363)
                      .
T Consensus       372 ~  372 (397)
T PRK14281        372 S  372 (397)
T ss_pred             h
Confidence            4

>PRK14284 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=2.2e-65  Score=510.50  Aligned_cols=238  Identities=39%  Similarity=0.793  Sum_probs=225.4

Q ss_pred             CCCCCcEEEEEEeehhhhhcCCeEEEEEeeeEeccCCCCCceeeCceeeeCCCCccccEEEEeeeCCCcceeeeecCCCC
Q 017925           56 VTKGEDLRYDIVLEFSESIFGAEKEFELSHLETCEVCTGTGAKMGSKMRICSTCGGRGQVMRTDQTPFGLFSQVSVCPSC  135 (363)
Q Consensus        56 ~~~g~di~~~l~ltlee~~~G~~~~i~~~~~~~C~~C~GsG~~~g~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C  135 (363)
                      +++++|+.+.|.|||||+|+|++++|++++.+.|++|+|+|++++....+|+.|+|+|.++..+    |+++++++|+.|
T Consensus       128 ~~~g~d~~~~l~vslee~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~v~~~~----G~~~~~~~C~~C  203 (391)
T PRK14284        128 ARQGASKKVHITLSFEEAAKGVEKELLVSGYKSCDACSGSGANSSQGIKVCDRCKGSGQVVQSR----GFFSMASTCPEC  203 (391)
T ss_pred             cCCCCCeEEEEEEEHHHHhCCeeEEEEEeeeccCCCCcccccCCCCCCeecCccCCeeEEEEEe----ceEEEEEECCCC
Confidence            4578999999999999999999999999999999999999999999899999999999877543    788888999999


Q ss_pred             CcccEEeceeeeecCCCcEEeeceEEEEEeCCCCCCCcEEEEccCcCCCCCCCCCccEEEEEEEEeccccccCCcceeEE
Q 017925          136 GGEGEVISEYCRKCSGEGRIRLKKNIKVKVPPGVSTGSILRVVGEGDAGPRGGPPGDLYVYLDVEEIPGIQRDGIDLFST  215 (363)
Q Consensus       136 ~G~G~vi~~~C~~C~G~G~v~~~~~l~V~IP~Gv~~G~~irl~G~G~~~~~g~~~GDL~V~i~v~~h~~f~R~G~DL~~~  215 (363)
                      +|+|+++.++|..|+|.|++++.++|+|+||||+.+|++|+|+|+|++++.++++|||||+|++++|+.|+|+|+|||++
T Consensus       204 ~G~G~~~~~~C~~C~G~g~v~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~  283 (391)
T PRK14284        204 GGEGRVITDPCSVCRGQGRIKDKRSVHVHIPAGVDSGMRLKMEGYGDAGQNGAPAGDLYVFIDVEPHPVFERRGDDLILE  283 (391)
T ss_pred             CCCCcccCCcCCCCCCcceecceEEEEEEECCCCCCCCEEEEeccccCCCCCCCCCCEEEEEEEecCCCceeecCCEEEE
Confidence            99999999999999999999999999999999999999999999999998888999999999999999999999999999


Q ss_pred             EEeceEEeecCcEEEEeccC--ceEEEecCCCCCCCcEEEEccCCCCCCCCCCCCccEEEEEEEEcCCCCCHHHHHHHHH
Q 017925          216 ISISYLDAIMGTVVKVKTVE--GISELQVPPGTQPGDVLVLAKKGAPKLNKPSIRGDHLFTVKVTIPNRISAKERELLEE  293 (363)
Q Consensus       216 ~~I~l~eAllG~~~~v~tld--G~~~l~ip~gtq~g~~~~l~g~G~P~~~~~~~rGDL~V~~~V~~P~~l~~~q~~ll~~  293 (363)
                      ++|+|.+||+|++++|+|||  +.++|+||+++++|++++|+|+|||..+. ..+|||||+|+|.+|+.|+++|+++|++
T Consensus       284 ~~Isl~eAl~G~~~~v~tld~g~~i~v~Ip~g~~~g~~~~i~g~G~p~~~~-~~~GDL~V~~~v~~P~~l~~~q~~ll~~  362 (391)
T PRK14284        284 LPIGFVDAALGMKKEIPTLLKEGTCRLTIPEGIQSGTILKVRGQGFPNVHG-KGRGDLLVRISVETPQNLSEEQKELLRQ  362 (391)
T ss_pred             EEecHHHHhCCCeEEEeecCCCcEEEEEECCccCCCeEEEECCCCCCCCCC-CCCCcEEEEEEEECCCCCCHHHHHHHHH
Confidence            99999999999999999999  55789999999999999999999997654 3689999999999999999999999999


Q ss_pred             HHhhc
Q 017925          294 LASLR  298 (363)
Q Consensus       294 l~~~~  298 (363)
                      |+++.
T Consensus       363 l~~~~  367 (391)
T PRK14284        363 FAATE  367 (391)
T ss_pred             HHhhc
Confidence            98653

>PRK14286 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=5.2e-65  Score=504.60  Aligned_cols=287  Identities=42%  Similarity=0.817  Sum_probs=249.9

Q ss_pred             CcccccccccCCCCCC-C---CCCCC---CChhhhhhhhhCCCCCCCCCCCCCCCCCCCCCCCCCCCcEEEEEEeehhhh
Q 017925            1 MYDQYGEAGVKSTVGG-G---SSAYT---TNPFDLFETFFGPSMGGFPGMNQTGFRTRRRSTVTKGEDLRYDIVLEFSES   73 (363)
Q Consensus         1 ~YD~~G~~g~~~g~gg-~---~~g~~---~~~~diF~~fFG~~~gg~~~~~~~g~~~~~~~~~~~g~di~~~l~ltlee~   73 (363)
                      +||+||+++++.+.++ +   +++|.   .++.|||++|||++++++   .  .  .+++.++++++|+++.|+|||+|+
T Consensus        65 ~YD~~G~~g~~~~~~~~~~~~~~~~~~~~~~~~d~f~~ffgg~~~~~---~--~--~~~~~~~~~g~di~~~l~vtLee~  137 (372)
T PRK14286         65 AYDQFGKAGVNAGAGGFGQGAYTDFSDIFGDFGDIFGDFFGGGRGGG---S--G--GGRRSGPQRGSDLRYNLEVSLEDA  137 (372)
T ss_pred             HHHHhCchhhccccCCCCCCCcccccccccchhhHHHHhhCCCccCC---C--c--ccccCCCCCCCCeeEEEEEEHHHH
Confidence            5999999987643211 1   11121   245689999997421110   0  0  011123457999999999999999


Q ss_pred             hcCCeEEEEEeeeEeccCCCCCceeeCceeeeCCCCccccEEEEeeeCCCcceeeeecCCCCCcccEEeceeeeecCCCc
Q 017925           74 IFGAEKEFELSHLETCEVCTGTGAKMGSKMRICSTCGGRGQVMRTDQTPFGLFSQVSVCPSCGGEGEVISEYCRKCSGEG  153 (363)
Q Consensus        74 ~~G~~~~i~~~~~~~C~~C~GsG~~~g~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~vi~~~C~~C~G~G  153 (363)
                      |+|++++|.+++.+.|++|+|+|++.+....+|+.|+|+|+++..+    |+++++++|+.|+|+|+++.++|..|+|.|
T Consensus       138 ~~G~~k~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~v~~~~----G~~~~~~~C~~C~G~G~~~~~~C~~C~G~g  213 (372)
T PRK14286        138 ALGREYKIEIPRLESCVDCNGSGASKGSSPTTCPDCGGSGQIRRTQ----GFFSVATTCPTCRGKGTVISNPCKTCGGQG  213 (372)
T ss_pred             hCCeeEEEEeeccccCCCCcCCCcCCCCCCccCCCCcCeEEEEEEe----ceEEEEEeCCCCCceeeEecccCCCCCCCc
Confidence            9999999999999999999999999988889999999999876643    788888999999999999999999999999


Q ss_pred             EEeeceEEEEEeCCCCCCCcEEEEccCcCCCCCCCCCccEEEEEEEEeccccccCCcceeEEEEeceEEeecCcEEEEec
Q 017925          154 RIRLKKNIKVKVPPGVSTGSILRVVGEGDAGPRGGPPGDLYVYLDVEEIPGIQRDGIDLFSTISISYLDAIMGTVVKVKT  233 (363)
Q Consensus       154 ~v~~~~~l~V~IP~Gv~~G~~irl~G~G~~~~~g~~~GDL~V~i~v~~h~~f~R~G~DL~~~~~I~l~eAllG~~~~v~t  233 (363)
                      ++++.++++|+||||+++|++|+|+|+|++.+.+.++|||||+|+|++|+.|+|+|+||+++++|+|.+||+|+++.|+|
T Consensus       214 ~~~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDL~i~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~t  293 (372)
T PRK14286        214 LQEKRRTINIKIPPGVETGSRLKVSGEGEAGPNGGPHGDLYVVTHIKKHELFERQGNDLILVRKISLAQAILGAEIEVPT  293 (372)
T ss_pred             EEecceEEEEEECCCCCCCCEEEECCccccCCCCCCCceEEEEEEEccCCCEEEecCCEEEEEEECHHHHhCCCEEEEeC
Confidence            99999999999999999999999999999988777889999999999999999999999999999999999999999999


Q ss_pred             cCce-EEEecCCCCCCCcEEEEccCCCCCCCCCCCCccEEEEEEEEcCCCCCHHHHHHHHHHHhhcC
Q 017925          234 VEGI-SELQVPPGTQPGDVLVLAKKGAPKLNKPSIRGDHLFTVKVTIPNRISAKERELLEELASLRN  299 (363)
Q Consensus       234 ldG~-~~l~ip~gtq~g~~~~l~g~G~P~~~~~~~rGDL~V~~~V~~P~~l~~~q~~ll~~l~~~~~  299 (363)
                      |||+ +.|+||+++++|++++|+|+|||..+.+ .+|||||+|+|.||+.|+++|+++|++|++.++
T Consensus       294 ldG~~i~v~ip~g~~~g~~~ri~G~G~P~~~~~-~~GDL~V~~~V~~P~~Ls~~qk~~l~~l~~~~~  359 (372)
T PRK14286        294 IDGKKAKMKIPEGTESGQVFRLKGHGMPYLGAY-GKGDQHVIVKIEIPKKITRRQRELIEEFARESG  359 (372)
T ss_pred             CCCCEEEEEeCCccCCCcEEEECCCCCCCCCCC-CCCcEEEEEEEECCCCCCHHHHHHHHHHHHhcC
Confidence            9997 7899999999999999999999976543 689999999999999999999999999998654

>PRK14288 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=8.5e-65  Score=502.63  Aligned_cols=282  Identities=28%  Similarity=0.562  Sum_probs=241.0

Q ss_pred             CcccccccccCCCCCCCCCCCCCChhhhhhhhhCCCCCCCCCCCCCCCCCCCCCCCCCCCcEEEEEEeehhhhhcCCeEE
Q 017925            1 MYDQYGEAGVKSTVGGGSSAYTTNPFDLFETFFGPSMGGFPGMNQTGFRTRRRSTVTKGEDLRYDIVLEFSESIFGAEKE   80 (363)
Q Consensus         1 ~YD~~G~~g~~~g~gg~~~g~~~~~~diF~~fFG~~~gg~~~~~~~g~~~~~~~~~~~g~di~~~l~ltlee~~~G~~~~   80 (363)
                      +||+||+++++++++ +.++| .++|+.|++||+..||++ +.      ++.+.++++++|+.+.|+|||+|+|+|++++
T Consensus        64 ~YD~~G~~~~~~~~~-~~~~~-~~~f~~~~~~F~~~fg~g-~~------~~~~~~~~~g~di~~~l~vslee~~~G~~~~  134 (369)
T PRK14288         64 LYDRYGKKGLNQAGA-SQSDF-SDFFEDLGSFFEDAFGFG-AR------GSKRQKSSIAPDYLQTIELSFKEAVFGCKKT  134 (369)
T ss_pred             HHHHhcccccccCCC-Ccccc-ccchhhHHHHHHhhcCCC-Cc------ccCcCCCCCCCCeeEeccccHHHHhCCeEEE
Confidence            599999988764211 11123 133444444554322211 10      0111234578999999999999999999999


Q ss_pred             EEEeeeEeccCCCCCceeeCceeeeCCCCccccEEEEeeeCCCcceeeeecCCCCCcccEEeceeeeecCCCcEEeeceE
Q 017925           81 FELSHLETCEVCTGTGAKMGSKMRICSTCGGRGQVMRTDQTPFGLFSQVSVCPSCGGEGEVISEYCRKCSGEGRIRLKKN  160 (363)
Q Consensus        81 i~~~~~~~C~~C~GsG~~~g~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~vi~~~C~~C~G~G~v~~~~~  160 (363)
                      |.+.+.+.|+.|+|+|++.+ ...+|+.|+|+|.+...+    |+++++++|+.|.|+|+++.++|..|+|.|++++.++
T Consensus       135 i~~~r~~~C~~C~G~G~~~~-~~~~C~~C~G~G~~~~~~----g~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~  209 (369)
T PRK14288        135 IKVQYQSVCESCDGTGAKDK-ALETCKQCNGQGQVFMRQ----GFMSFAQTCGACQGKGKIIKTPCQACKGKTYILKDEE  209 (369)
T ss_pred             EEEEeeccCCCCCCcccCCC-CCcCCCCCCCCcEEEEEe----ceEEEEEecCCCCCCceEccccCccCCCcceEEEEEE
Confidence            99999999999999999886 578999999999876543    7778889999999999999999999999999999999


Q ss_pred             EEEEeCCCCCCCcEEEEccCcCCCCCCCCCccEEEEEEEEeccccccCCcceeEEEEeceEEeecCcEEEEeccCce-EE
Q 017925          161 IKVKVPPGVSTGSILRVVGEGDAGPRGGPPGDLYVYLDVEEIPGIQRDGIDLFSTISISYLDAIMGTVVKVKTVEGI-SE  239 (363)
Q Consensus       161 l~V~IP~Gv~~G~~irl~G~G~~~~~g~~~GDL~V~i~v~~h~~f~R~G~DL~~~~~I~l~eAllG~~~~v~tldG~-~~  239 (363)
                      |+|+||||+++|++|+|+|+|++.+ ++.+|||||+|+|++|+.|+|+|+|||++++|+|.|||||+++.|+||||+ ++
T Consensus       210 l~V~IP~G~~~G~~i~l~g~G~~~~-~~~~GDL~v~i~v~~h~~f~R~G~DL~~~~~Isl~eAllG~~i~v~tLdG~~l~  288 (369)
T PRK14288        210 IDAIIPEGIDDQNRMVLKNKGNEYE-KGKRGDLYLEARVKEDEHFKREGCDLFIEAPVFFTTIALGHTIKVPSLKGDELE  288 (369)
T ss_pred             EEEecCCCCCCCCEEEEccCccCCC-CCCCCCEEEEEEEEECCCcEEeCCEEEEEEecCHHHHhcCCEEEeecCCCCEEE
Confidence            9999999999999999999999976 578999999999999999999999999999999999999999999999997 79


Q ss_pred             EecCCCCCCCcEEEEccCCCCCCCCCCCCccEEEEEEEEcCCCCCHHHHHHHHHHHhhc
Q 017925          240 LQVPPGTQPGDVLVLAKKGAPKLNKPSIRGDHLFTVKVTIPNRISAKERELLEELASLR  298 (363)
Q Consensus       240 l~ip~gtq~g~~~~l~g~G~P~~~~~~~rGDL~V~~~V~~P~~l~~~q~~ll~~l~~~~  298 (363)
                      |+||++++||++++|+|+|||..+. ..+|||||+|+|.+|+.|+++|+++|++|++.+
T Consensus       289 i~i~~~~~~g~~~~i~g~G~p~~~~-~~~GDL~v~~~v~~P~~ls~~q~~~l~~~~~~~  346 (369)
T PRK14288        289 LKIPRNARDRQTFAFRNEGVKHPES-SYRGSLIVELQVIYPKSLNKEQQELLEKLHASF  346 (369)
T ss_pred             EEeCCCCCCCcEEEEcCCCCCCCCC-CCCCCEEEEEEEECCCCCCHHHHHHHHHHHhhc
Confidence            9999999999999999999997653 358999999999999999999999999999753

>PRK14285 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=8.7e-64  Score=494.76  Aligned_cols=285  Identities=27%  Similarity=0.625  Sum_probs=250.3

Q ss_pred             CcccccccccCCCCCC-CC-CCC---C---CChhhhhhhhhCCCCCCCCCCCCCCCCCCCCCCCCCCCcEEEEEEeehhh
Q 017925            1 MYDQYGEAGVKSTVGG-GS-SAY---T---TNPFDLFETFFGPSMGGFPGMNQTGFRTRRRSTVTKGEDLRYDIVLEFSE   72 (363)
Q Consensus         1 ~YD~~G~~g~~~g~gg-~~-~g~---~---~~~~diF~~fFG~~~gg~~~~~~~g~~~~~~~~~~~g~di~~~l~ltlee   72 (363)
                      +||+||+++++++++. ++ ++|   +   .++.|||++|||++.   +.        .+..++++|+|++++|.|||+|
T Consensus        64 ~yd~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~d~f~~~fgg~~---~~--------~~~~~~~~g~di~~~l~vtlee  132 (365)
T PRK14285         64 QYDRFGHTAFEGGGGFEGFSGGFSGFSDIFEDFGDIFDSFFTGNR---GQ--------DKNRKHEKGQDLTYQIEISLED  132 (365)
T ss_pred             HHHhcCcchhccCCCccccCCCccccccccccHHHHHHHhhcCCc---CC--------CCCcCCCCCCCEEEEEEEEHHH
Confidence            5999999988643210 11 121   1   245688999987311   00        0111235799999999999999


Q ss_pred             hhcCCeEEEEEeeeEeccCCCCCceeeCceeeeCCCCccccEEEEeeeCCCcceeeeecCCCCCcccEEeceeeeecCCC
Q 017925           73 SIFGAEKEFELSHLETCEVCTGTGAKMGSKMRICSTCGGRGQVMRTDQTPFGLFSQVSVCPSCGGEGEVISEYCRKCSGE  152 (363)
Q Consensus        73 ~~~G~~~~i~~~~~~~C~~C~GsG~~~g~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~vi~~~C~~C~G~  152 (363)
                      +|+|++++|++++.+.|..|+|+|++.+..+.+|+.|+|+|+++.    .+|+++++++|+.|.|+|+++.++|..|+|.
T Consensus       133 ~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~----~~G~~~~~~~C~~C~G~G~~~~~~C~~C~G~  208 (365)
T PRK14285        133 AYLGYKNNINITRNMLCESCLGKKSEKGTSPSICNMCNGSGRVMQ----GGGFFRVTTTCPKCYGNGKIISNPCKSCKGK  208 (365)
T ss_pred             hhCCeEEEEEeeecccCCCCCCcccCCCCCCccCCCccCceeEEe----cCceeEEeeecCCCCCcccccCCCCCCCCCC
Confidence            999999999999999999999999999988999999999998764    3588888899999999999999999999999


Q ss_pred             cEEeeceEEEEEeCCCCCCCcEEEEccCcCCCCCCCCCccEEEEEEEEeccccccCCcceeEEEEeceEEeecCcEEEEe
Q 017925          153 GRIRLKKNIKVKVPPGVSTGSILRVVGEGDAGPRGGPPGDLYVYLDVEEIPGIQRDGIDLFSTISISYLDAIMGTVVKVK  232 (363)
Q Consensus       153 G~v~~~~~l~V~IP~Gv~~G~~irl~G~G~~~~~g~~~GDL~V~i~v~~h~~f~R~G~DL~~~~~I~l~eAllG~~~~v~  232 (363)
                      |++++.++++|+||||+++|++|+|+|+|++.+++.++|||||+|++++|+.|+|+|+|||++++|+|.+||+|++++|+
T Consensus       209 g~v~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDL~v~i~v~~h~~f~R~G~dL~~~~~Isl~eAl~G~~~~i~  288 (365)
T PRK14285        209 GSLKKKETIELKIPAGIDDNQQIKMRGKGSVNPDNQQYGDLYIKILIKPHKIFKRNGKDLYATLPISFTQAALGKEIKIQ  288 (365)
T ss_pred             CEEeccEEEEEEECCCCCCCCEEEEeeccccCCCCCCCCCEEEEEEEecCCCeEEeccceEEEEecCHHHHhCCCEEEEE
Confidence            99999999999999999999999999999998877789999999999999999999999999999999999999999999


Q ss_pred             ccCce-EEEecCCCCCCCcEEEEccCCCCCCCCCCCCccEEEEEEEEcCCCCCHHHHHHHHHHHhhcCCC
Q 017925          233 TVEGI-SELQVPPGTQPGDVLVLAKKGAPKLNKPSIRGDHLFTVKVTIPNRISAKERELLEELASLRNTT  301 (363)
Q Consensus       233 tldG~-~~l~ip~gtq~g~~~~l~g~G~P~~~~~~~rGDL~V~~~V~~P~~l~~~q~~ll~~l~~~~~~~  301 (363)
                      ||||+ ++|+||+++++|++++|+|+|||..+.. .+|||||+|+|.+|+.|+++|+++|++|++...+.
T Consensus       289 tldG~~v~V~Ip~g~~~g~~irl~GkG~p~~~~~-~~GDL~V~~~v~~P~~l~~~q~~~l~~l~~~~~~~  357 (365)
T PRK14285        289 TIASKKIKIKIPKGTENDEQIIIKNEGMPILHTE-KFGNLILIIKIKTPKNLNSNAIKLLENLSKELKDI  357 (365)
T ss_pred             CCCCCEEEEEeCCCcCCCcEEEECCCCccCCCCC-CCCCEEEEEEEECCCCCCHHHHHHHHHHHHHhccc
Confidence            99996 7899999999999999999999976543 57999999999999999999999999999888764

>PTZ00037 DnaJ_C chaperone protein; Provisional

Probab=100.00  E-value=5.4e-64  Score=502.60  Aligned_cols=275  Identities=29%  Similarity=0.583  Sum_probs=243.6

Q ss_pred             CcccccccccCCCCCCCCCCCCCChhhhhhhhhCCCCCCCCCCCCCCCCCCCCCCCCCCCcEEEEEEeehhhhhcCCeEE
Q 017925            1 MYDQYGEAGVKSTVGGGSSAYTTNPFDLFETFFGPSMGGFPGMNQTGFRTRRRSTVTKGEDLRYDIVLEFSESIFGAEKE   80 (363)
Q Consensus         1 ~YD~~G~~g~~~g~gg~~~g~~~~~~diF~~fFG~~~gg~~~~~~~g~~~~~~~~~~~g~di~~~l~ltlee~~~G~~~~   80 (363)
                      +||+||++++.++.    +  +.+++|+|+.|||+   +.         ++  .+.++|+|+.+.|.|||+|+|+|++++
T Consensus        85 ~YD~~G~~~~~~~~----~--~~d~~d~f~~~Fgg---g~---------~~--~~~~rg~di~~~l~vtLee~~~G~~~~  144 (421)
T PTZ00037         85 IYDEYGEEGLEGGE----Q--PADASDLFDLIFGG---GR---------KP--GGKKRGEDIVSHLKVTLEQIYNGAMRK  144 (421)
T ss_pred             HHhhhcchhcccCC----C--CcchhhhHHHhhcc---cc---------cc--ccccCCCCEEEEeeeeHHHHhCCCceE
Confidence            59999998876321    1  12568999999973   10         00  123578999999999999999999999


Q ss_pred             EEEeeeEeccCCCCCceeeCceeeeCCCCccccEEEEeeeCCCcceeeeecCCCCCcccEEec--eeeeecCCCcEEeec
Q 017925           81 FELSHLETCEVCTGTGAKMGSKMRICSTCGGRGQVMRTDQTPFGLFSQVSVCPSCGGEGEVIS--EYCRKCSGEGRIRLK  158 (363)
Q Consensus        81 i~~~~~~~C~~C~GsG~~~g~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~vi~--~~C~~C~G~G~v~~~  158 (363)
                      |.+.+.+.|+.|+|+|.+.+ ...+|+.|+|+|+++..+++++-.++++++|+.|+|+|+++.  ++|..|+|.|++++.
T Consensus       145 i~~~r~~~C~~C~G~G~~~~-~~~~C~~C~G~G~~~~~~~~g~~~~q~~~~C~~C~G~G~~i~~~~~C~~C~G~g~v~~~  223 (421)
T PTZ00037        145 LAINKDVICANCEGHGGPKD-AFVDCKLCNGQGIRVQIRQMGSMIHQTQSTCNSCNGQGKIIPESKKCKNCSGKGVKKTR  223 (421)
T ss_pred             EEeeccccccccCCCCCCCC-CCccCCCCCCCCeEEEEEeecceeeEEEEeCCCCCCcceeccccccCCcCCCcceeeee
Confidence            99999999999999998655 578999999999988777765522344589999999999986  899999999999999


Q ss_pred             eEEEEEeCCCCCCCcEEEEccCcCCCCCCCCCccEEEEEEEEeccccccCCcceeEEEEeceEEeecCcEEEEeccCce-
Q 017925          159 KNIKVKVPPGVSTGSILRVVGEGDAGPRGGPPGDLYVYLDVEEIPGIQRDGIDLFSTISISYLDAIMGTVVKVKTVEGI-  237 (363)
Q Consensus       159 ~~l~V~IP~Gv~~G~~irl~G~G~~~~~g~~~GDL~V~i~v~~h~~f~R~G~DL~~~~~I~l~eAllG~~~~v~tldG~-  237 (363)
                      ++|+|+||||+.+|++|+|+|+|++.+ ++.||||||+|++++|+.|+|+|+|||++++|+|++||||+++.|+||||+ 
T Consensus       224 ~~l~V~Ip~G~~dG~~I~~~G~Gd~~~-~~~pGDLiv~I~~~ph~~F~R~G~DL~~~~~Isl~eAllG~~i~I~tLdG~~  302 (421)
T PTZ00037        224 KILEVNIDKGVPNQHKITFHGEADEKP-NEIPGNVVFILNEKPHDTFKREGGDLFITKKISLYEALTGFVFYITHLDGRK  302 (421)
T ss_pred             eEEEEeeCCCCCCCcEEEEecccCCCC-CCCCCcEEEEEEecCCCCcEEeCCeEEEEEeCCHHHHhcCCEEEeeCCCCCe
Confidence            999999999999999999999999976 578999999999999999999999999999999999999999999999997 


Q ss_pred             EEEecCCC--CCCCcEEEEccCCCCCCCCCCCCccEEEEEEEEcC--CCCCHHHHHHHHHHHhh
Q 017925          238 SELQVPPG--TQPGDVLVLAKKGAPKLNKPSIRGDHLFTVKVTIP--NRISAKERELLEELASL  297 (363)
Q Consensus       238 ~~l~ip~g--tq~g~~~~l~g~G~P~~~~~~~rGDL~V~~~V~~P--~~l~~~q~~ll~~l~~~  297 (363)
                      ++|+||||  |+||++++|+|+|||..++++.+|||||+|+|.||  +.||++|+++|++|+..
T Consensus       303 l~I~ip~g~vt~pg~~~~I~geGmP~~~~~~~rGDL~V~~~V~~P~~~~Ls~~qk~ll~~l~~~  366 (421)
T PTZ00037        303 LLVNTPPGEVVKPGDIKVINNEGMPTYKSPFKKGNLYVTFEVIFPVDRKFTNEEKEILKSLFPQ  366 (421)
T ss_pred             EEEEeCCCcccCCCcEEEeCCCCcccCCCCCCCCCEEEEEEEEcCCCCCCCHHHHHHHHHhccC
Confidence            78999998  99999999999999987655578999999999999  99999999999999864

>PRK14300 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=4.6e-63  Score=490.92  Aligned_cols=285  Identities=36%  Similarity=0.738  Sum_probs=247.2

Q ss_pred             CcccccccccCCCC---C-CCCCCCCCChhhhhhhhhCCCCCCCCCCCCCCCCCCCCCCCCCCCcEEEEEEeehhhhhcC
Q 017925            1 MYDQYGEAGVKSTV---G-GGSSAYTTNPFDLFETFFGPSMGGFPGMNQTGFRTRRRSTVTKGEDLRYDIVLEFSESIFG   76 (363)
Q Consensus         1 ~YD~~G~~g~~~g~---g-g~~~g~~~~~~diF~~fFG~~~gg~~~~~~~g~~~~~~~~~~~g~di~~~l~ltlee~~~G   76 (363)
                      +||+||++++..+.   + +++++|..++.|+|++||+..||+. +      .+.+...+++++|+.+.|.|||+|+|+|
T Consensus        63 ~yD~~G~~~~~~~~~~~~~g~~~~~~~~~~~~f~~~f~~~~gg~-~------~~~~~~~~~~g~di~~~l~~sLee~~~G  135 (372)
T PRK14300         63 AYDRFGHDAFQNQQSRGGGGNHGGFHPDINDIFGDFFSDFMGGS-R------RSRPTSSKVRGSDLKYNLTINLEEAFHG  135 (372)
T ss_pred             HHHhccccccccccccCCCCCCCccccchhhhHHHHHHhhcCCC-C------CCCCCcCCCCCCCeeEEEEEEHHHHhCC
Confidence            59999998876321   1 1112332245678888887533221 0      0011112357899999999999999999


Q ss_pred             CeEEEEEeeeEeccCCCCCceeeCceeeeCCCCccccEEEEeeeCCCcceeeeecCCCCCcccEEeceeeeecCCCcEEe
Q 017925           77 AEKEFELSHLETCEVCTGTGAKMGSKMRICSTCGGRGQVMRTDQTPFGLFSQVSVCPSCGGEGEVISEYCRKCSGEGRIR  156 (363)
Q Consensus        77 ~~~~i~~~~~~~C~~C~GsG~~~g~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~vi~~~C~~C~G~G~v~  156 (363)
                      ++++|.+.+.+.|+.|+|+|.+.+....+|+.|+|+|.++..    +|+++++.+|+.|+|+|+++.++|..|+|.|++.
T Consensus       136 ~~k~i~~~r~~~C~~C~G~g~~~~~~~~~C~~C~G~G~~~~~----~g~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~  211 (372)
T PRK14300        136 IEKNISFSSEVKCDTCHGSGSEKGETVTTCDACSGVGATRMQ----QGFFTIEQACHKCQGNGQIIKNPCKKCHGMGRYH  211 (372)
T ss_pred             ceEEEEeeeccccCCCCCcccCCCCCCccCCCccCeEEEEEe----eceEEEEEeCCCCCccceEeCCCCCCCCCceEEE
Confidence            999999999999999999999998888999999999987653    3888888999999999999999999999999999


Q ss_pred             eceEEEEEeCCCCCCCcEEEEccCcCCCCCCCCCccEEEEEEEEeccccccCCcceeEEEEeceEEeecCcEEEEeccCc
Q 017925          157 LKKNIKVKVPPGVSTGSILRVVGEGDAGPRGGPPGDLYVYLDVEEIPGIQRDGIDLFSTISISYLDAIMGTVVKVKTVEG  236 (363)
Q Consensus       157 ~~~~l~V~IP~Gv~~G~~irl~G~G~~~~~g~~~GDL~V~i~v~~h~~f~R~G~DL~~~~~I~l~eAllG~~~~v~tldG  236 (363)
                      +.++++|.||||+++|++|+|+|+|++.+.+..+|||||+|++++|+.|+|+|+||+++++|+|.+||+|+++.|+||||
T Consensus       212 ~~~~~~V~Ip~G~~~G~~i~l~g~G~~~~~~~~~GDL~v~i~v~~h~~f~R~G~Dl~~~~~Isl~~Al~G~~~~i~~ldg  291 (372)
T PRK14300        212 KQRNLSVNIPAGVENGTRIRHTGEGEAGIRGGNSGDLYVDIAIKPHDIYKVDGANLHCKLPISFVNAALGGEIEVPVIEG  291 (372)
T ss_pred             eeEEEEEEECCCCCCCcEEEEeccccCCCCCCCCCCEEEEEEECCCCCeEEecCCEEEEEecCHHHHhCCCEEEEecCCC
Confidence            99999999999999999999999999987778899999999999999999999999999999999999999999999998


Q ss_pred             -eEEEecCCCCCCCcEEEEccCCCCCCCCCCCCccEEEEEEEEcCCCCCHHHHHHHHHHHhh
Q 017925          237 -ISELQVPPGTQPGDVLVLAKKGAPKLNKPSIRGDHLFTVKVTIPNRISAKERELLEELASL  297 (363)
Q Consensus       237 -~~~l~ip~gtq~g~~~~l~g~G~P~~~~~~~rGDL~V~~~V~~P~~l~~~q~~ll~~l~~~  297 (363)
                       .++|+||+|+++|++++|+|+|||..+. ..+|||||+|+|.+|++||++|+++|++|+++
T Consensus       292 ~~i~v~Ip~g~~~g~~iri~g~G~p~~~~-~~~GDL~V~~~v~~P~~ls~~qk~~l~~l~~~  352 (372)
T PRK14300        292 GKVNLTIPAGTQNGDQLRLRSKGMSKMRS-TIRGDMLTHIHVEVPKNLSKRQRELLEEFKKE  352 (372)
T ss_pred             CEEEEEECCccCCCcEEEECCCCCCCCCC-CCCCCEEEEEEEECCCCCCHHHHHHHHHHHhh
Confidence             5799999999999999999999997643 36899999999999999999999999999863

>PRK14282 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=5.7e-63  Score=489.89  Aligned_cols=288  Identities=42%  Similarity=0.780  Sum_probs=252.5

Q ss_pred             CcccccccccCCCC-C-CCCCCC-C-----C-Ch--hhhhhhhhCCCCCCCCCCCCCCCCCCCCCCCCCCCcEEEEEEee
Q 017925            1 MYDQYGEAGVKSTV-G-GGSSAY-T-----T-NP--FDLFETFFGPSMGGFPGMNQTGFRTRRRSTVTKGEDLRYDIVLE   69 (363)
Q Consensus         1 ~YD~~G~~g~~~g~-g-g~~~g~-~-----~-~~--~diF~~fFG~~~gg~~~~~~~g~~~~~~~~~~~g~di~~~l~lt   69 (363)
                      +||+||++++.... + ++.++| .     + ++  .|+|++|||++ +   +.      .+++.++++++|+++.|+||
T Consensus        66 ~YD~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~f~~~fgg~-~---~~------~~~~~~~~~g~di~~~l~~s  135 (369)
T PRK14282         66 MYDRFGYVGEQPPYQETESGGGFFEDIFKDFENIFNRDIFDIFFGER-R---TQ------EEQREYARRGEDIRYEIEVT  135 (369)
T ss_pred             HHhhcCccccccccccCCCCCcccccccccccccccchhhhHhhccc-C---Cc------ccccCCCCCCCCeEEEEEEE
Confidence            59999998765311 0 111121 1     0 11  27888888631 0   00      01112345799999999999


Q ss_pred             hhhhhcCCeEEEEEeeeEeccCCCCCceeeCceeeeCCCCccccEEEEeeeCCCcceeeeecCCCCCcccEEeceeeeec
Q 017925           70 FSESIFGAEKEFELSHLETCEVCTGTGAKMGSKMRICSTCGGRGQVMRTDQTPFGLFSQVSVCPSCGGEGEVISEYCRKC  149 (363)
Q Consensus        70 lee~~~G~~~~i~~~~~~~C~~C~GsG~~~g~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~vi~~~C~~C  149 (363)
                      |+|+|+|++++|++.+.+.|+.|+|+|++.+....+|+.|+|+|.++..+++++|+++++++|+.|+|+|+++.++|..|
T Consensus       136 lee~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~~~~~~C~~C  215 (369)
T PRK14282        136 LSDLINGAEIPVEYDRYETCPHCGGTGVEPGSGYVTCPKCHGTGRIREERRSFFGVFVSERTCERCGGTGKIPGEYCHEC  215 (369)
T ss_pred             HHHhcCCeEEEEEeeecccCCCCCccCCCCCCCCcCCCCCCCcCEEEEEEEccCcceEEEEECCCCCCcceeCCCCCCCC
Confidence            99999999999999999999999999999998889999999999999999999999999999999999999999999999


Q ss_pred             CCCcEEeeceEEEEEeCCCCCCCcEEEEccCcCCCCCCCCCccEEEEEEEEeccccccCCcceeEEEEeceEEeecCcEE
Q 017925          150 SGEGRIRLKKNIKVKVPPGVSTGSILRVVGEGDAGPRGGPPGDLYVYLDVEEIPGIQRDGIDLFSTISISYLDAIMGTVV  229 (363)
Q Consensus       150 ~G~G~v~~~~~l~V~IP~Gv~~G~~irl~G~G~~~~~g~~~GDL~V~i~v~~h~~f~R~G~DL~~~~~I~l~eAllG~~~  229 (363)
                      +|.|++.+.++|+|+||||+.+|++|+|+|+|++.+.++++|||||+|++++|+.|+|+|+||+++++|+|.||++|+++
T Consensus       216 ~G~g~v~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDl~i~i~v~~h~~F~r~G~DL~~~~~Isl~eAl~G~~~  295 (369)
T PRK14282        216 GGSGRIRRRVRTTVKIPAGVEDGTVLRITGGGNAGYYGGPYGDLYVIVRVRPDPRFKRSGSDLIYDVTIDYLQAILGTTV  295 (369)
T ss_pred             CCceeEEEEEEEEEEeCCCCCCCCEEEEecccCCCCCCCCCCCEEEEEEEecCCcEEEecCCEEEEEEeCHHHHhCCCEE
Confidence            99999999999999999999999999999999998878889999999999999999999999999999999999999999


Q ss_pred             EEeccCce-EEEecCCCCCCCcEEEEccCCCCCCCCCCCCccEEEEEEEEcCCCCCHHHHHHHHHHHhhcC
Q 017925          230 KVKTVEGI-SELQVPPGTQPGDVLVLAKKGAPKLNKPSIRGDHLFTVKVTIPNRISAKERELLEELASLRN  299 (363)
Q Consensus       230 ~v~tldG~-~~l~ip~gtq~g~~~~l~g~G~P~~~~~~~rGDL~V~~~V~~P~~l~~~q~~ll~~l~~~~~  299 (363)
                      +|+|+||+ ++|+||+|+++|++++|+|+|||..+. ..+|||||+|+|.+|+.|+.+|++||++|++++.
T Consensus       296 ~i~~ldG~~i~v~Ip~g~~~g~~iri~GkG~p~~~~-~~~GDL~V~~~v~~P~~l~~~~~~ll~~l~~~~~  365 (369)
T PRK14282        296 EVPLPEGGTTMLKIPPGTQPETVFRLKGKGLPNMRY-GRRGDLIVNVHVEIPKRLSREERKLLKELAKKRG  365 (369)
T ss_pred             EEeCCCCcEEEEEeCCCcCCCCEEEECCCCCCCCCC-CCCCCEEEEEEEECCCCCCHHHHHHHHHHHHhcC
Confidence            99999997 799999999999999999999997543 3589999999999999999999999999998654

>PRK14294 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=4.5e-63  Score=490.12  Aligned_cols=284  Identities=47%  Similarity=0.888  Sum_probs=247.9

Q ss_pred             CcccccccccCCCCCCCCCCCC---CChhhhhhhhhCCCCCCCCCCCCCCCCCCCCCCCCCCCcEEEEEEeehhhhhcCC
Q 017925            1 MYDQYGEAGVKSTVGGGSSAYT---TNPFDLFETFFGPSMGGFPGMNQTGFRTRRRSTVTKGEDLRYDIVLEFSESIFGA   77 (363)
Q Consensus         1 ~YD~~G~~g~~~g~gg~~~g~~---~~~~diF~~fFG~~~gg~~~~~~~g~~~~~~~~~~~g~di~~~l~ltlee~~~G~   77 (363)
                      +||+||++++++++.+++++|.   .++.|||++|||.  +++++       .+...++++++|+++.|.|||+|+|+|+
T Consensus        65 ~yD~~G~~g~~~~~~~~~~~~~~~~~~~~d~f~~~fg~--g~~~~-------~~~~~~~~~g~d~~~~l~lslee~~~G~  135 (366)
T PRK14294         65 IYDQYGHEGLSGTGFSGFSGFDDIFSSFGDIFEDFFGF--GGGRR-------GRSRTAVRAGADLRYDLTLPFLEAAFGT  135 (366)
T ss_pred             HHHhhccccccCCCCCCcCccccchhhhhhhHHHhhcc--CCCcC-------CcccCCCCCCCCceEEEEeeHHHhcCCe
Confidence            5999999988642111112221   2345888888861  11100       0111124579999999999999999999


Q ss_pred             eEEEEEeeeEeccCCCCCceeeCceeeeCCCCccccEEEEeeeCCCcceeeeecCCCCCcccEEeceeeeecCCCcEEee
Q 017925           78 EKEFELSHLETCEVCTGTGAKMGSKMRICSTCGGRGQVMRTDQTPFGLFSQVSVCPSCGGEGEVISEYCRKCSGEGRIRL  157 (363)
Q Consensus        78 ~~~i~~~~~~~C~~C~GsG~~~g~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~vi~~~C~~C~G~G~v~~  157 (363)
                      +++|.+.+.+.|..|+|+|...+....+|+.|+|+|.+....    |+++++++|+.|+|+|+++.++|..|+|.|++.+
T Consensus       136 ~~~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~----G~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~  211 (366)
T PRK14294        136 EKEIRIQKLETCEECHGSGCEPGTSPTTCPQCGGSGQVTQSQ----GFFSIRTTCPRCRGMGKVIVSPCKTCHGQGRVRV  211 (366)
T ss_pred             EEEEEeeecccCCCCCCccccCCCCcccCCCcCCeEEEEEEe----eeEEEEeeCCCCCCcCeecCcCCCCCCCceEeec
Confidence            999999999999999999999988889999999999876432    7888889999999999999999999999999999


Q ss_pred             ceEEEEEeCCCCCCCcEEEEccCcCCCCCCCCCccEEEEEEEEeccccccCCcceeEEEEeceEEeecCcEEEEeccCce
Q 017925          158 KKNIKVKVPPGVSTGSILRVVGEGDAGPRGGPPGDLYVYLDVEEIPGIQRDGIDLFSTISISYLDAIMGTVVKVKTVEGI  237 (363)
Q Consensus       158 ~~~l~V~IP~Gv~~G~~irl~G~G~~~~~g~~~GDL~V~i~v~~h~~f~R~G~DL~~~~~I~l~eAllG~~~~v~tldG~  237 (363)
                      .++++|.||||+++|++|+|+|+|++.+.++.+|||||+|++++|+.|+|+|+|||+++.|+|.+||+|++++|+||||+
T Consensus       212 ~~~l~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDl~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~tldG~  291 (366)
T PRK14294        212 SKTVQVKIPAGVDTGSRLRLRGEGEAGVRGGPPGDLYVFLTVEPHEFFERDGNDVHCKVPISFVQAALGAQIEVPTLEGE  291 (366)
T ss_pred             ceeEEEecCCCCcCCcEEEEccCccCCCCCCCCCcEEEEEEEccCCcceecCCCEEEEEEeCHHHHhCCCeEEEECCCCc
Confidence            99999999999999999999999999877788999999999999999999999999999999999999999999999999


Q ss_pred             EEEecCCCCCCCcEEEEccCCCCCCCCCCCCccEEEEEEEEcCCCCCHHHHHHHHHHHhhc
Q 017925          238 SELQVPPGTQPGDVLVLAKKGAPKLNKPSIRGDHLFTVKVTIPNRISAKERELLEELASLR  298 (363)
Q Consensus       238 ~~l~ip~gtq~g~~~~l~g~G~P~~~~~~~rGDL~V~~~V~~P~~l~~~q~~ll~~l~~~~  298 (363)
                      +.|+||+|+++|++++|+|+|||..+. ..+|||||+|+|.+|+.|+++|++||++|+++.
T Consensus       292 ~~v~ip~g~~~g~~iri~G~G~p~~~~-~~~GDL~V~~~v~~P~~l~~~q~~ll~~~~~~~  351 (366)
T PRK14294        292 RELKIPKGTQPGDIFRFKGKGIPSLRG-GGRGDQIIEVEVKVPTRLTKKQEELLTEFARLE  351 (366)
T ss_pred             EEEEECCCcCCCCEEEECCCCCCCCCC-CCCCCEEEEEEEECCCCCCHHHHHHHHHHHHhc
Confidence            899999999999999999999997654 368999999999999999999999999999753

>PRK14295 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=6.4e-63  Score=492.09  Aligned_cols=237  Identities=40%  Similarity=0.761  Sum_probs=224.3

Q ss_pred             CCCCCcEEEEEEeehhhhhcCCeEEEEEeeeEeccCCCCCceeeCceeeeCCCCccccEEEEeeeCCCcceeeeecCCCC
Q 017925           56 VTKGEDLRYDIVLEFSESIFGAEKEFELSHLETCEVCTGTGAKMGSKMRICSTCGGRGQVMRTDQTPFGLFSQVSVCPSC  135 (363)
Q Consensus        56 ~~~g~di~~~l~ltlee~~~G~~~~i~~~~~~~C~~C~GsG~~~g~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C  135 (363)
                      +++++|+++.|.|||||+|+|++++|.+.+.+.|++|+|+|++.+..+.+|+.|+|+|+++..+    |+|+++++|+.|
T Consensus       136 ~~~g~di~~~l~lsLee~~~G~~k~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~----g~~~~~~~C~~C  211 (389)
T PRK14295        136 PRRGADVESEVTLSFTEAIDGATVPLRLTSQAPCPACSGTGAKNGTTPRVCPTCSGTGQVSRNS----GGFSLSEPCPDC  211 (389)
T ss_pred             CCCCCCEEEEEEEEHHHHhCCceEEEEeeccccCCCCcccccCCCCCCcCCCCCCCEeEEEEEe----cceEEEEecCCC
Confidence            4579999999999999999999999999999999999999999998889999999999987654    677788999999


Q ss_pred             CcccEEeceeeeecCCCcEEeeceEEEEEeCCCCCCCcEEEEccCcCCCCCCCCCccEEEEEEEEeccccccCCcceeEE
Q 017925          136 GGEGEVISEYCRKCSGEGRIRLKKNIKVKVPPGVSTGSILRVVGEGDAGPRGGPPGDLYVYLDVEEIPGIQRDGIDLFST  215 (363)
Q Consensus       136 ~G~G~vi~~~C~~C~G~G~v~~~~~l~V~IP~Gv~~G~~irl~G~G~~~~~g~~~GDL~V~i~v~~h~~f~R~G~DL~~~  215 (363)
                      +|+|+++.++|..|.|.|++.+.++++|+||+|+++|++|+|+|+|++.+.+.++|||||+|++++|+.|+|+|+|||++
T Consensus       212 ~G~G~~~~~~C~~C~G~g~~~~~~~l~V~Ip~G~~~G~~i~l~g~G~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~  291 (389)
T PRK14295        212 KGRGLIADDPCLVCKGSGRAKSSRTMQVRIPAGVSDGQRIRLRGKGAPGERGGPAGDLYVVVHVDPHPVFGRSGDNLTVT  291 (389)
T ss_pred             cceeEEeccCCCCCCCCceEeeeeEEEEEeCCCCCCCCEEEEcccccCCCCCCCCccEEEEEEEecCCCEEEecCCEEEE
Confidence            99999999999999999999999999999999999999999999999987778899999999999999999999999999


Q ss_pred             EEeceEEeecCcEEEEeccCce-EEEecCCCCCCCcEEEEccCCCCCCCCCCCCccEEEEEEEEcCCCCCHHHHHHHHHH
Q 017925          216 ISISYLDAIMGTVVKVKTVEGI-SELQVPPGTQPGDVLVLAKKGAPKLNKPSIRGDHLFTVKVTIPNRISAKERELLEEL  294 (363)
Q Consensus       216 ~~I~l~eAllG~~~~v~tldG~-~~l~ip~gtq~g~~~~l~g~G~P~~~~~~~rGDL~V~~~V~~P~~l~~~q~~ll~~l  294 (363)
                      ++|+|.+||+|++++|+||||+ +.|+||+++++|++++|+|+|||...  +.+|||||+|+|.||+.|+++|+++|++|
T Consensus       292 ~~Isl~eAl~G~~~~I~tldG~~~~v~ip~g~~~g~~iri~G~G~p~~~--~~~GDL~i~~~v~~P~~Ls~~qk~~l~~l  369 (389)
T PRK14295        292 VPVTFPEAALGAEVRVPTLGGPPVTVKLPPGTPNGRVLRVRGKGAVRKD--GTRGDLLVTVEVAVPKDLSGKAREALEAF  369 (389)
T ss_pred             EeecHHHHhCCCeEEEECCCCCEEEEEECCccCCCcEEEECCCCcCCCC--CCCCCEEEEEEEECCCCCCHHHHHHHHHH
Confidence            9999999999999999999994 79999999999999999999999643  46899999999999999999999999999


Q ss_pred             Hhhc
Q 017925          295 ASLR  298 (363)
Q Consensus       295 ~~~~  298 (363)
                      ++..
T Consensus       370 ~~~~  373 (389)
T PRK14295        370 REAT  373 (389)
T ss_pred             Hhhc
Confidence            9754

>PRK14301 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=4.6e-63  Score=490.89  Aligned_cols=280  Identities=40%  Similarity=0.765  Sum_probs=245.6

Q ss_pred             CcccccccccCCCCCCCCCCCC------CChhhhhhhhhCCCCCCCCCCCCCCCCCCCCCCCCCCCcEEEEEEeehhhhh
Q 017925            1 MYDQYGEAGVKSTVGGGSSAYT------TNPFDLFETFFGPSMGGFPGMNQTGFRTRRRSTVTKGEDLRYDIVLEFSESI   74 (363)
Q Consensus         1 ~YD~~G~~g~~~g~gg~~~g~~------~~~~diF~~fFG~~~gg~~~~~~~g~~~~~~~~~~~g~di~~~l~ltlee~~   74 (363)
                      +||+||+++++++++  +++|.      .++.|+|++|||.  ++++        ..+..++++|+|+.+.|.|||+|+|
T Consensus        65 ~yD~~g~~g~~~~~~--~~g~~~~~~~~~~f~d~f~~~fg~--g~~~--------~~~~~~~~~g~di~~~l~vtLee~~  132 (373)
T PRK14301         65 RYDRFGHAGVNGNGG--FGGFSSAEDIFSHFSDIFGDLFGF--SGGG--------SRRGPRPQAGSDLRYNLTVSFRQAA  132 (373)
T ss_pred             hhhhccccccccCCC--CCCcccccccccchHHHHHHHhhc--cCcc--------cccCCCCCCCCCEEEEEeccHHHHh
Confidence            599999998864311  12221      1234667777752  1100        0111234679999999999999999


Q ss_pred             cCCeEEEEEeeeEeccCCCCCceeeCceeeeCCCCccccEEEEeeeCCCcceeeeecCCCCCcccEEeceeeeecCCCcE
Q 017925           75 FGAEKEFELSHLETCEVCTGTGAKMGSKMRICSTCGGRGQVMRTDQTPFGLFSQVSVCPSCGGEGEVISEYCRKCSGEGR  154 (363)
Q Consensus        75 ~G~~~~i~~~~~~~C~~C~GsG~~~g~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~vi~~~C~~C~G~G~  154 (363)
                      +|++++|.+.+.+.|+.|+|+|++.+..+.+|+.|+|+|++...+    |+++++++|+.|+|+|+++.++|+.|+|.|+
T Consensus       133 ~G~~k~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~v~~~~----G~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~  208 (373)
T PRK14301        133 KGDEVTLRIPKNVTCDDCGGSGAAPGTSPETCRHCGGSGQVRQSQ----GFFQIAVPCPVCRGEGRVITHPCPKCKGSGI  208 (373)
T ss_pred             CCceEEEEeeecccCCCCCCcccCCCCCCcccCCccCeeEEEEEe----eeEEEEEeCCCCCceeeecCCCCCCCCCCce
Confidence            999999999999999999999999988889999999999986542    7888889999999999999999999999999


Q ss_pred             EeeceEEEEEeCCCCCCCcEEEEccCcCCCCCCCCCccEEEEEEEEeccccccCCcceeEEEEeceEEeecCcEEEEecc
Q 017925          155 IRLKKNIKVKVPPGVSTGSILRVVGEGDAGPRGGPPGDLYVYLDVEEIPGIQRDGIDLFSTISISYLDAIMGTVVKVKTV  234 (363)
Q Consensus       155 v~~~~~l~V~IP~Gv~~G~~irl~G~G~~~~~g~~~GDL~V~i~v~~h~~f~R~G~DL~~~~~I~l~eAllG~~~~v~tl  234 (363)
                      +++.++++|+||+|+++|++|+|+|+|++.+.++++|||||+|+|++|+.|+|+|+|||++++|+|.+||+|++++|+||
T Consensus       209 v~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDLiv~i~v~~h~~f~r~G~DL~~~~~Isl~eAl~G~~~~v~tl  288 (373)
T PRK14301        209 VQQTRELKVRIPAGVDTGSRLRLRGEGEPGVHGGPPGDLYVVITVEDDKIFQRQGQDLVVTQEISFVQAALGDRIEVPTL  288 (373)
T ss_pred             eccceEEEEEeCCCCcCCCEEEEeccccCCCCCCCCcCEEEEEEEEECCCceeecCcEEEEEEecHHHHhCCCeEEEecC
Confidence            99999999999999999999999999999877788999999999999999999999999999999999999999999999


Q ss_pred             CceEEEecCCCCCCCcEEEEccCCCCCCCCCCCCccEEEEEEEEcCCCCCHHHHHHHHHHHhh
Q 017925          235 EGISELQVPPGTQPGDVLVLAKKGAPKLNKPSIRGDHLFTVKVTIPNRISAKERELLEELASL  297 (363)
Q Consensus       235 dG~~~l~ip~gtq~g~~~~l~g~G~P~~~~~~~rGDL~V~~~V~~P~~l~~~q~~ll~~l~~~  297 (363)
                      ||++.|+||+++++|++++|+|+|||..+. ..+|||||+|+|.+|+.|+++|+++|++|+.+
T Consensus       289 dG~i~v~ip~g~~~g~~~ri~g~G~p~~~~-~~~GDL~I~~~V~~P~~l~~~q~~~l~~l~~~  350 (373)
T PRK14301        289 DDPVTLDIPKGTQSGEVFRLRGKGLPYLGS-SQKGDLLVEVSVVTPTKLTKRQEELLREFEAL  350 (373)
T ss_pred             CccEEEEECCCcCCCcEEEEcCCCCCCCCC-CCCCCEEEEEEEECCCCCCHHHHHHHHHHHhh
Confidence            999899999999999999999999997654 36899999999999999999999999999975

>PRK14279 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=5e-63  Score=493.33  Aligned_cols=237  Identities=35%  Similarity=0.706  Sum_probs=225.1

Q ss_pred             CCCCCcEEEEEEeehhhhhcCCeEEEEEeeeEeccCCCCCceeeCceeeeCCCCccccEEEEeeeCCCcceeeeecCCCC
Q 017925           56 VTKGEDLRYDIVLEFSESIFGAEKEFELSHLETCEVCTGTGAKMGSKMRICSTCGGRGQVMRTDQTPFGLFSQVSVCPSC  135 (363)
Q Consensus        56 ~~~g~di~~~l~ltlee~~~G~~~~i~~~~~~~C~~C~GsG~~~g~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C  135 (363)
                      +++++|+++.|+|||+|+|+|++++|.+.+.+.|+.|+|+|++.+..+.+|+.|+|+|+++..+    |+++++++|+.|
T Consensus       143 ~~~g~di~~~l~ltLee~~~G~~~~v~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~----g~~~~~~~C~~C  218 (392)
T PRK14279        143 PRRGNDLETETTLDFVEAAKGVTMPLRLTSPAPCTTCHGSGARPGTSPKVCPTCNGSGVISRNQ----GAFGFSEPCTDC  218 (392)
T ss_pred             CCCCCCeEEEEEEEHHHHhCCeEEEEeeeccccCCCCccccccCCCCCCCCCCCcceEEEEEEe----cceEEEEecCCC
Confidence            4579999999999999999999999999999999999999999998899999999999886653    677788999999


Q ss_pred             CcccEEeceeeeecCCCcEEeeceEEEEEeCCCCCCCcEEEEccCcCCCCCCCCCccEEEEEEEEeccccccCCcceeEE
Q 017925          136 GGEGEVISEYCRKCSGEGRIRLKKNIKVKVPPGVSTGSILRVVGEGDAGPRGGPPGDLYVYLDVEEIPGIQRDGIDLFST  215 (363)
Q Consensus       136 ~G~G~vi~~~C~~C~G~G~v~~~~~l~V~IP~Gv~~G~~irl~G~G~~~~~g~~~GDL~V~i~v~~h~~f~R~G~DL~~~  215 (363)
                      +|+|+++.++|..|+|.|++++.++++|+||||+++|++|+|+|+|++.+++.++|||||+|+|++|+.|+|+|+||+++
T Consensus       219 ~G~G~~i~~~C~~C~G~g~v~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDL~i~i~v~~h~~F~R~G~DL~~~  298 (392)
T PRK14279        219 RGTGSIIEDPCEECKGTGVTTRTRTINVRIPPGVEDGQRIRLAGQGEAGLRGAPSGDLYVTVHVRPDKVFGRDGDDLTVT  298 (392)
T ss_pred             CceeEEeCCcCCCCCCCeEEEEeeeeEEEeCCCCCCCcEEEEeCCccCCCCCCCCCCEEEEEEEecCCcceeecCcEEEE
Confidence            99999999999999999999999999999999999999999999999988778899999999999999999999999999


Q ss_pred             EEeceEEeecCcEEEEeccCceEEEecCCCCCCCcEEEEccCCCCCCCCCCCCccEEEEEEEEcCCCCCHHHHHHHHHHH
Q 017925          216 ISISYLDAIMGTVVKVKTVEGISELQVPPGTQPGDVLVLAKKGAPKLNKPSIRGDHLFTVKVTIPNRISAKERELLEELA  295 (363)
Q Consensus       216 ~~I~l~eAllG~~~~v~tldG~~~l~ip~gtq~g~~~~l~g~G~P~~~~~~~rGDL~V~~~V~~P~~l~~~q~~ll~~l~  295 (363)
                      ++|+|.+||+|++++|+||||++.|+||+++++|++++|+|+|||..  ...+|||||+|+|.||++|+++|+++|++|+
T Consensus       299 ~~Isl~eAl~G~~~~v~~ldg~i~v~Ip~g~~~g~~iri~g~G~p~~--~~~~GDL~I~~~v~~P~~Ls~~q~~~l~~~~  376 (392)
T PRK14279        299 VPVSFTELALGSTLSVPTLDGPVGVKVPAGTADGRILRVRGRGVPKR--SGGAGDLLVTVKVAVPPNLDGAAAEALEAYA  376 (392)
T ss_pred             EEccHHHHcCCceEEEEcCCceEEEEECCCCCCCCEEEECCCCCCCC--CCCCCCEEEEEEEECCCCCCHHHHHHHHHHH
Confidence            99999999999999999999998999999999999999999999963  2468999999999999999999999999999


Q ss_pred             hhc
Q 017925          296 SLR  298 (363)
Q Consensus       296 ~~~  298 (363)
                      ++.
T Consensus       377 ~~~  379 (392)
T PRK14279        377 EAE  379 (392)
T ss_pred             hhc
Confidence            753

>PRK10767 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=2.6e-62  Score=485.78  Aligned_cols=283  Identities=40%  Similarity=0.784  Sum_probs=243.4

Q ss_pred             CcccccccccCCCCC-CCCCCCCCChhhhhhhhhCCCCCCCCCCCCCCCCCCCCCCCCCCCcEEEEEEeehhhhhcCCeE
Q 017925            1 MYDQYGEAGVKSTVG-GGSSAYTTNPFDLFETFFGPSMGGFPGMNQTGFRTRRRSTVTKGEDLRYDIVLEFSESIFGAEK   79 (363)
Q Consensus         1 ~YD~~G~~g~~~g~g-g~~~g~~~~~~diF~~fFG~~~gg~~~~~~~g~~~~~~~~~~~g~di~~~l~ltlee~~~G~~~   79 (363)
                      +||+||++++..+.+ ++++++ .++.|+|++||+..||++++       + .++++++++|+++.|+|||+|+|+|+++
T Consensus        65 ~yd~~g~~~~~~~~~~~~~~~~-~~~~~~f~~~f~~~fgg~~~-------~-~~~~~~~g~di~~~l~vsLee~~~G~~~  135 (371)
T PRK10767         65 AYDQYGHAAFEQGGGGGGFGGG-GGFGDIFGDIFGDIFGGGRG-------G-GRQRARRGADLRYNMEITLEEAVRGVTK  135 (371)
T ss_pred             HhhhccccccccCCCCCCCCCc-cccccchhhhhhhhccCCcc-------c-cCCCCCCCCCeEEEEEeehHHhhCCeeE
Confidence            599999998864321 111121 12224444444432222100       1 1122457999999999999999999999


Q ss_pred             EEEEeeeEeccCCCCCceeeCceeeeCCCCccccEEEEeeeCCCcceeeeecCCCCCcccEEeceeeeecCCCcEEeece
Q 017925           80 EFELSHLETCEVCTGTGAKMGSKMRICSTCGGRGQVMRTDQTPFGLFSQVSVCPSCGGEGEVISEYCRKCSGEGRIRLKK  159 (363)
Q Consensus        80 ~i~~~~~~~C~~C~GsG~~~g~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~vi~~~C~~C~G~G~v~~~~  159 (363)
                      +|.+.+.+.|+.|+|+|...+....+|+.|+|+|.++..+    |+++++++|+.|+|+|+++.++|..|+|.|++++.+
T Consensus       136 ~v~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~----g~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~  211 (371)
T PRK10767        136 EIRIPTLVTCDTCHGSGAKPGTSPKTCPTCHGAGQVRMQQ----GFFTVQQTCPTCHGRGKIIKDPCKKCHGQGRVEKEK  211 (371)
T ss_pred             EEeeeecccCCCCCCcccCCCCCCccCCCCCCeeEEEEee----ceEEEEEeCCCCCCceeECCCCCCCCCCCceEeeee
Confidence            9999999999999999999988889999999999876543    788888999999999999999999999999999999


Q ss_pred             EEEEEeCCCCCCCcEEEEccCcCCCCCCCCCccEEEEEEEEeccccccCCcceeEEEEeceEEeecCcEEEEeccCceEE
Q 017925          160 NIKVKVPPGVSTGSILRVVGEGDAGPRGGPPGDLYVYLDVEEIPGIQRDGIDLFSTISISYLDAIMGTVVKVKTVEGISE  239 (363)
Q Consensus       160 ~l~V~IP~Gv~~G~~irl~G~G~~~~~g~~~GDL~V~i~v~~h~~f~R~G~DL~~~~~I~l~eAllG~~~~v~tldG~~~  239 (363)
                      +++|+||||+.+|++|+|+|+|++.+.+..+|||||+|++++|+.|+|+|+||++++.|+|.+||+|++++|+||||.+.
T Consensus       212 ~l~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~~ldG~i~  291 (371)
T PRK10767        212 TLSVKIPAGVDTGDRIRLSGEGEAGERGGPAGDLYVQIHVKEHPIFERDGNDLYCEVPISFTTAALGGEIEVPTLDGRVK  291 (371)
T ss_pred             eEEEecCCCCCCCcEEEEecCccCCCCCCCCcCEEEEEEEeeCCCEEEecCCEEEEEEeCHHHHhCCCeEEEecCCCcEE
Confidence            99999999999999999999999977677899999999999999999999999999999999999999999999999889


Q ss_pred             EecCCCCCCCcEEEEccCCCCCCCCCCCCccEEEEEEEEcCCCCCHHHHHHHHHHHhh
Q 017925          240 LQVPPGTQPGDVLVLAKKGAPKLNKPSIRGDHLFTVKVTIPNRISAKERELLEELASL  297 (363)
Q Consensus       240 l~ip~gtq~g~~~~l~g~G~P~~~~~~~rGDL~V~~~V~~P~~l~~~q~~ll~~l~~~  297 (363)
                      |+||+++++|++++|+|+|||..+. ..+|||||+|+|.+|+.|+++|+++|++|++.
T Consensus       292 v~ip~g~~~g~~~~i~g~G~p~~~~-~~~GDL~v~~~v~~P~~l~~~~~~ll~~l~~~  348 (371)
T PRK10767        292 LKIPEGTQTGKLFRLRGKGVKSVRS-GARGDLYCQVVVETPVNLTKRQKELLEEFEES  348 (371)
T ss_pred             EEeCCCCCCCCEEEECCCCcCCCCC-CCCCCEEEEEEEECCCCCCHHHHHHHHHHHhh
Confidence            9999999999999999999997654 36899999999999999999999999999864

>TIGR02349 DnaJ_bact chaperone protein DnaJ

Probab=100.00  E-value=1.9e-62  Score=484.07  Aligned_cols=287  Identities=49%  Similarity=0.898  Sum_probs=254.4

Q ss_pred             CcccccccccCCCCCC---CCCCCC----CChhhhhhhhhCCCCCCCCCCCCCCCCCCCCCCCCCCCcEEEEEEeehhhh
Q 017925            1 MYDQYGEAGVKSTVGG---GSSAYT----TNPFDLFETFFGPSMGGFPGMNQTGFRTRRRSTVTKGEDLRYDIVLEFSES   73 (363)
Q Consensus         1 ~YD~~G~~g~~~g~gg---~~~g~~----~~~~diF~~fFG~~~gg~~~~~~~g~~~~~~~~~~~g~di~~~l~ltlee~   73 (363)
                      +||+||+++++++.++   ++.++.    .++.|+|++|||++++   +      ++.+..++++++|+++.|.|||+|+
T Consensus        60 ~yd~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~fg~~~g---~------~~~~~~~~~~~~d~~~~l~vsLee~  130 (354)
T TIGR02349        60 QYDQFGHAGFNGGGGGGGGGFNGFDIGFFGDFGDIFGDFFGGGGG---S------GRRRRSGPRRGEDLRYDLELTFEEA  130 (354)
T ss_pred             hhhhcccccccccCcCCCCCcCCccccCcCchhhhHHHHhccCcc---c------CccccCCCCCCCCeEEEEEEEHHHH
Confidence            5999999988643211   111111    2456899999974211   0      0111123468999999999999999


Q ss_pred             hcCCeEEEEEeeeEeccCCCCCceeeCceeeeCCCCccccEEEEeeeCCCcceeeeecCCCCCcccEEeceeeeecCCCc
Q 017925           74 IFGAEKEFELSHLETCEVCTGTGAKMGSKMRICSTCGGRGQVMRTDQTPFGLFSQVSVCPSCGGEGEVISEYCRKCSGEG  153 (363)
Q Consensus        74 ~~G~~~~i~~~~~~~C~~C~GsG~~~g~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~vi~~~C~~C~G~G  153 (363)
                      |+|+++++.+.+.+.|+.|+|+|+..+....+|+.|+|+|.++..+++++|+++++++|+.|.|+|+++.++|..|+|.|
T Consensus       131 ~~G~~~~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~G~g  210 (354)
T TIGR02349       131 VFGVEKEIEIPRKESCETCHGTGAKPGTDPKTCPTCGGTGQVRRQQGTPFGFFQQQQTCPTCGGEGKIIKEPCSTCKGKG  210 (354)
T ss_pred             hCCeeEEEEeecCCcCCCCCCCCCCCCCCCccCCCCCCeeEEEEEEeccCCceEEEEecCCCCCcceecCCCCCCCCCCc
Confidence            99999999999999999999999998888899999999999999999999999999999999999999999999999999


Q ss_pred             EEeeceEEEEEeCCCCCCCcEEEEccCcCCCCCCCCCccEEEEEEEEeccccccCCcceeEEEEeceEEeecCcEEEEec
Q 017925          154 RIRLKKNIKVKVPPGVSTGSILRVVGEGDAGPRGGPPGDLYVYLDVEEIPGIQRDGIDLFSTISISYLDAIMGTVVKVKT  233 (363)
Q Consensus       154 ~v~~~~~l~V~IP~Gv~~G~~irl~G~G~~~~~g~~~GDL~V~i~v~~h~~f~R~G~DL~~~~~I~l~eAllG~~~~v~t  233 (363)
                      ++.+.++++|+||||+.+|++|+|+|+|++.+.+.++|||||+|++++|+.|+|+|+||++++.|+|.|||+|+++.|+|
T Consensus       211 ~v~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDl~v~i~v~~h~~f~r~g~DL~~~~~isl~eAl~G~~~~i~~  290 (354)
T TIGR02349       211 RVKERKTITVKIPAGVDTGQRLRVSGKGNAGENGGPNGDLYVVIRVKPHKIFERDGNDLYIEVPISFTQAILGGEIEVPT  290 (354)
T ss_pred             EecccceEEEEECCCCCCCCEEEEecCccCCCCCCCCCCEEEEEEEecCcceEEecCCEEEEEEeCHHHHhCCCeEEEec
Confidence            99999999999999999999999999999877678899999999999999999999999999999999999999999999


Q ss_pred             cCceEEEecCCCCCCCcEEEEccCCCCCCCCCCCCccEEEEEEEEcCCCCCHHHHHHHHHHHhh
Q 017925          234 VEGISELQVPPGTQPGDVLVLAKKGAPKLNKPSIRGDHLFTVKVTIPNRISAKERELLEELASL  297 (363)
Q Consensus       234 ldG~~~l~ip~gtq~g~~~~l~g~G~P~~~~~~~rGDL~V~~~V~~P~~l~~~q~~ll~~l~~~  297 (363)
                      |||.++|+||+++++|++++|+|+|||..+.. .+|||||+|+|.+|+.|+++|+++|++|++.
T Consensus       291 ldG~i~v~ip~g~~~g~~~~i~g~G~p~~~~~-~~GDL~i~~~v~~P~~l~~~~~~~l~~~~~~  353 (354)
T TIGR02349       291 LDGDVKLKIPAGTQSGTVFRLKGKGVPRLRGN-GRGDLLVTVKVETPKNLSKEQKELLEELAEA  353 (354)
T ss_pred             CCceEEEEECCcccCCcEEEECCCCcCCCCCC-CCCCEEEEEEEECCCCCCHHHHHHHHHHHhh
Confidence            99988999999999999999999999976543 6899999999999999999999999999864

This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family.

>PRK14289 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=2.9e-62  Score=487.62  Aligned_cols=294  Identities=39%  Similarity=0.701  Sum_probs=252.9

Q ss_pred             CcccccccccCCCCC-CCCCCCCCChhhhhhh---hhCCCCCCCCCCCCCCCCCC-CCCCCCCCCcEEEEEEeehhhhhc
Q 017925            1 MYDQYGEAGVKSTVG-GGSSAYTTNPFDLFET---FFGPSMGGFPGMNQTGFRTR-RRSTVTKGEDLRYDIVLEFSESIF   75 (363)
Q Consensus         1 ~YD~~G~~g~~~g~g-g~~~g~~~~~~diF~~---fFG~~~gg~~~~~~~g~~~~-~~~~~~~g~di~~~l~ltlee~~~   75 (363)
                      +||+||+++++++.+ +++++.+.++.|+|++   +|++.++++++++  .+++. ...+..+++|+++.|.|||+|+|+
T Consensus        66 ~yD~~G~~~~~~~~~~~~~~~~~~~~~~~f~~f~~~fg~~~gg~~~~~--~~~~~~~~~~~~~g~di~~~l~vsLee~~~  143 (386)
T PRK14289         66 RYDQFGHAGVGGAAGGGGFSGEGMSMEDIFSMFGDIFGGHGGGFGGFG--GFGGGGSQQRVFRGSDLRVKVKLNLKEIST  143 (386)
T ss_pred             HHHHhcccccccCCCCCCCCCCCcChhhhhHHhhhhhcccccCccccc--ccccccccCCCCCCCCeEEEEEEEHHHhhC
Confidence            499999988764211 1111111234556544   4764333221110  01111 112245789999999999999999


Q ss_pred             CCeEEEEEeeeEeccCCCCCceeeCceeeeCCCCccccEEEEeeeCCCcceeeeecCCCCCcccEEeceeeeecCCCcEE
Q 017925           76 GAEKEFELSHLETCEVCTGTGAKMGSKMRICSTCGGRGQVMRTDQTPFGLFSQVSVCPSCGGEGEVISEYCRKCSGEGRI  155 (363)
Q Consensus        76 G~~~~i~~~~~~~C~~C~GsG~~~g~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~vi~~~C~~C~G~G~v  155 (363)
                      |++++|++.+.+.|..|+|+|+.......+|+.|+|+|.++..+++++|++++..+|+.|.|+|+++.++|..|+|.|++
T Consensus       144 G~~~~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v  223 (386)
T PRK14289        144 GVEKKFKVKKYVPCSHCHGTGAEGNNGSETCPTCKGSGSVTRVQNTILGTMQTQSTCPTCNGEGKIIKKKCKKCGGEGIV  223 (386)
T ss_pred             CeEEEEEEEeecccCCCCCCCCCCCCCCCcCCCCcCeEEEEEEEecccceEEEEEecCCCCccccccCcCCCCCCCCcEE
Confidence            99999999999999999999999888889999999999999999999999999999999999999999999999999999


Q ss_pred             eeceEEEEEeCCCCCCCcEEEEccCcCCCCCCCCCccEEEEEEEEeccccccCCcceeEEEEeceEEeecCcEEEEeccC
Q 017925          156 RLKKNIKVKVPPGVSTGSILRVVGEGDAGPRGGPPGDLYVYLDVEEIPGIQRDGIDLFSTISISYLDAIMGTVVKVKTVE  235 (363)
Q Consensus       156 ~~~~~l~V~IP~Gv~~G~~irl~G~G~~~~~g~~~GDL~V~i~v~~h~~f~R~G~DL~~~~~I~l~eAllG~~~~v~tld  235 (363)
                      ++.++++|+||+|+++|++|+|+|+|++.+.+..+|||||+|++++|+.|+|+++||++++.|+|.+||+|+++.|+|+|
T Consensus       224 ~~~~~~~V~Ip~G~~~G~~i~l~g~G~~~~~~~~~GDL~v~v~v~~~~~f~r~g~DL~~~~~Isl~eAl~G~~~~i~~ld  303 (386)
T PRK14289        224 YGEEVITVKIPAGVAEGMQLSMNGKGNAGKHGGVNGDLLVVIEEEPHPELIRDENDLIYNLLLSVPTAALGGAVEVPTID  303 (386)
T ss_pred             eeeEEEEEEeCCCCCCCCEEEEeccccCCCCCCCCccEEEEEEEecCCcccccccceeEEeccCHHHHhCCCeEEeecCC
Confidence            99999999999999999999999999998777889999999999999999999999999999999999999999999999


Q ss_pred             ceEEEecCCCCCCCcEEEEccCCCCCCCCCCCCccEEEEEEEEcCCCCCHHHHHHHHHHHhh
Q 017925          236 GISELQVPPGTQPGDVLVLAKKGAPKLNKPSIRGDHLFTVKVTIPNRISAKERELLEELASL  297 (363)
Q Consensus       236 G~~~l~ip~gtq~g~~~~l~g~G~P~~~~~~~rGDL~V~~~V~~P~~l~~~q~~ll~~l~~~  297 (363)
                      |++.|+||+++++|++++|+|+|||..+. ..+|||||+|+|.||+.|+++|+++|++|++.
T Consensus       304 g~i~v~ip~g~~~g~~~ri~g~G~p~~~~-~~~GDL~v~~~v~~P~~l~~~q~~~l~~l~~~  364 (386)
T PRK14289        304 GKAKVKIEAGTQPGKVLRLRNKGLPSVNG-YGTGDLLVNVSVYIPETLSKEEKQTLEKMENS  364 (386)
T ss_pred             ceEEEEECCccCCCcEEEECCCCcCCCCC-CCCCcEEEEEEEEeCCCCCHHHHHHHHHHHhh
Confidence            99899999999999999999999997654 36899999999999999999999999999975

>PRK14292 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=1.9e-61  Score=479.64  Aligned_cols=286  Identities=34%  Similarity=0.675  Sum_probs=249.6

Q ss_pred             CcccccccccCCCC-CCCCCCCCCChhhhhhhhhCCCCCCCCCCCCCCCCCCCCCCCCCCCcEEEEEEeehhhhhcCCeE
Q 017925            1 MYDQYGEAGVKSTV-GGGSSAYTTNPFDLFETFFGPSMGGFPGMNQTGFRTRRRSTVTKGEDLRYDIVLEFSESIFGAEK   79 (363)
Q Consensus         1 ~YD~~G~~g~~~g~-gg~~~g~~~~~~diF~~fFG~~~gg~~~~~~~g~~~~~~~~~~~g~di~~~l~ltlee~~~G~~~   79 (363)
                      +||+||++++.+.. +++++++++++.|+|++|||+.  ++++    +  +. ..+++++.|+.+.+.|||+|+|+|+++
T Consensus        62 ~yd~~G~~~~~~~~~~~~~~~~~~d~~d~f~~~fg~~--~~~~----~--~~-~~~~~~g~d~~~~l~~sLee~~~G~~~  132 (371)
T PRK14292         62 HYDRFGTAPGAGMPGGDPFGGMGFDPMDIFEQLFGGA--GFGG----G--RG-RRGPARGDDLETEARITLEQARAGEEV  132 (371)
T ss_pred             hHhhcCCcccccccCCcccCccCCChHHHHHHhhCCC--CcCC----C--CC-cccccCCCCeEEEEeccHHHHcCCeEE
Confidence            59999998643211 1112233346779999999742  1110    0  00 112457999999999999999999999


Q ss_pred             EEEEeeeEeccCCCCCceeeCc-eeeeCCCCccccEEEEeeeCCCcceeeeecCCCCCcccEEeceeeeecCCCcEEeec
Q 017925           80 EFELSHLETCEVCTGTGAKMGS-KMRICSTCGGRGQVMRTDQTPFGLFSQVSVCPSCGGEGEVISEYCRKCSGEGRIRLK  158 (363)
Q Consensus        80 ~i~~~~~~~C~~C~GsG~~~g~-~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~vi~~~C~~C~G~G~v~~~  158 (363)
                      ++.+.+.+.|+.|+|+|+.... ...+|+.|+|+|.+...+++.+|+++++++|+.|+|.|+.+.++|..|+|.|++...
T Consensus       133 ~v~~~r~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~  212 (371)
T PRK14292        133 EVEVDRLTECEHCHGSRTEPGGKPPKTCPTCRGAGAVRAQARTIFGVVETQQPCPTCRGEGQIITDPCTVCRGRGRTLKA  212 (371)
T ss_pred             EEEEEeeecCCCCcccccCCCCCCCccCCCCCCccEEEEEEeccCceEEEeeecCCCcccceecCCCCCCCCCceEEeec
Confidence            9999999999999999998775 478999999999998888888899999999999999999999999999999999999


Q ss_pred             eEEEEEeCCCCCCCcEEEEccCcCCCCCCCCCccEEEEEEEEeccccccCCcceeEEEEeceEEeecCcEEEEeccCceE
Q 017925          159 KNIKVKVPPGVSTGSILRVVGEGDAGPRGGPPGDLYVYLDVEEIPGIQRDGIDLFSTISISYLDAIMGTVVKVKTVEGIS  238 (363)
Q Consensus       159 ~~l~V~IP~Gv~~G~~irl~G~G~~~~~g~~~GDL~V~i~v~~h~~f~R~G~DL~~~~~I~l~eAllG~~~~v~tldG~~  238 (363)
                      ++++|.||+|+.+|++|+|+|+|++.+.+ . |||||+|++++|+.|+|+|+||+++++|+|.+|++|+++.|+||||+.
T Consensus       213 ~~~~V~Ip~G~~~G~~i~~~G~G~~~~~~-~-GDL~v~i~v~~h~~f~r~g~dL~~~~~isl~eAl~G~~~~i~tldG~~  290 (371)
T PRK14292        213 ETVKVKLPRGIDEGYRIRVAGMGNEGPGG-N-GDLYVHIEMEPHPELRREQEHLIYEARIGFAKAALGGQITVPTLDGPQ  290 (371)
T ss_pred             ceEEEEECCCCCCCcEEEEecCcCCCCCC-C-CCEEEEEEEecCCccccchhceeEEeccCHHHHhCCCeEEEECCCCCE
Confidence            99999999999999999999999997644 3 999999999999999999999999999999999999999999999988


Q ss_pred             EEecCCCCCCCcEEEEccCCCCCCCCCCCCccEEEEEEEEcCCCCCHHHHHHHHHHHhhc
Q 017925          239 ELQVPPGTQPGDVLVLAKKGAPKLNKPSIRGDHLFTVKVTIPNRISAKERELLEELASLR  298 (363)
Q Consensus       239 ~l~ip~gtq~g~~~~l~g~G~P~~~~~~~rGDL~V~~~V~~P~~l~~~q~~ll~~l~~~~  298 (363)
                      .|+||+|+++|++++|+|+|||..+.. .+|||||+|+|.+|+.|+++|++||++|++..
T Consensus       291 ~v~ip~g~~~g~~~~i~g~G~p~~~~~-~~GDL~V~~~v~~P~~l~~~q~~ll~~~~~~~  349 (371)
T PRK14292        291 VIEVKPGTQHGDLHRLRGQGMPRLQGA-GTGDLIVEYEIAVPKQLSPEAREALEAYARAV  349 (371)
T ss_pred             EEecCCCcCCCcEEEECCCCCCCCCCC-CCCCEEEEEEEECCCCCCHHHHHHHHHHHhhc
Confidence            899999999999999999999976543 57999999999999999999999999998643

>PRK14293 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=1.6e-61  Score=480.27  Aligned_cols=293  Identities=55%  Similarity=0.984  Sum_probs=255.4

Q ss_pred             CcccccccccCCCCC-CCCCCCCCChhhhhhhhhCCCCCCCCCCCCCCCCCCCCCCCCCCCcEEEEEEeehhhhhcCCeE
Q 017925            1 MYDQYGEAGVKSTVG-GGSSAYTTNPFDLFETFFGPSMGGFPGMNQTGFRTRRRSTVTKGEDLRYDIVLEFSESIFGAEK   79 (363)
Q Consensus         1 ~YD~~G~~g~~~g~g-g~~~g~~~~~~diF~~fFG~~~gg~~~~~~~g~~~~~~~~~~~g~di~~~l~ltlee~~~G~~~   79 (363)
                      +||+||+++++++.+ ++.+++ .++.|+|++|||+. ++++   +.++. .+..++.+++|+.+.|.|||+|+|+|+++
T Consensus        63 ~yd~~g~~g~~~~~~~~~~~~~-~~~~d~f~~~fg~~-~~~~---~~~~~-~~~~~~~kg~di~~~l~vsLee~~~G~~k  136 (374)
T PRK14293         63 RYDQFGEAGVSGAAGFPDMGDM-GGFADIFETFFSGF-GGAG---GQGGR-RRRRGPQRGDDLRYDLKLDFREAIFGGEK  136 (374)
T ss_pred             HHhhccccccccCCCcCCcccc-cchHHHHHHHhccc-CCCC---CCCcc-ccccCccCCCCeEEEEEeeHHHHhCCceE
Confidence            599999988764211 111112 13458999999742 1111   00000 11122457899999999999999999999


Q ss_pred             EEEEeeeEeccCCCCCceeeCceeeeCCCCccccEEEEeeeCCCcceeeeecCCCCCcccEEeceeeeecCCCcEEeece
Q 017925           80 EFELSHLETCEVCTGTGAKMGSKMRICSTCGGRGQVMRTDQTPFGLFSQVSVCPSCGGEGEVISEYCRKCSGEGRIRLKK  159 (363)
Q Consensus        80 ~i~~~~~~~C~~C~GsG~~~g~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~vi~~~C~~C~G~G~v~~~~  159 (363)
                      ++++++.+.|..|+|+|...+....+|+.|+|+|.++..+++++|++++.++|+.|.|.|+++.++|..|.|.|++.+.+
T Consensus       137 ~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~  216 (374)
T PRK14293        137 EIRIPHLETCETCRGSGAKPGTGPTTCSTCGGAGQVRRATRTPFGSFTQVSECPTCNGTGQVIEDPCDACGGQGVKQVTK  216 (374)
T ss_pred             EEEeeccccCCCCCCcCCCCCCCCeeCCCCCCcceEEEEEecCcceEEEEeeCCCCCcceeEeccCCCCCCCCcccccce
Confidence            99999999999999999999888899999999999999999999999999999999999999999999999999999999


Q ss_pred             EEEEEeCCCCCCCcEEEEccCcCCCCCCCCCccEEEEEEEEeccccccCCcceeEEEEeceEEeecCcEEEEeccCceEE
Q 017925          160 NIKVKVPPGVSTGSILRVVGEGDAGPRGGPPGDLYVYLDVEEIPGIQRDGIDLFSTISISYLDAIMGTVVKVKTVEGISE  239 (363)
Q Consensus       160 ~l~V~IP~Gv~~G~~irl~G~G~~~~~g~~~GDL~V~i~v~~h~~f~R~G~DL~~~~~I~l~eAllG~~~~v~tldG~~~  239 (363)
                      +++|+||||+++|++|+|+|+|++.+.+..+|||||+|++++|+.|+|+|+||+++++|+|.+||+|+++.|+||||+++
T Consensus       217 ~~~V~IppG~~~G~~i~l~g~G~~~~~~~~~GDL~v~v~v~~~~~f~r~g~DL~~~~~Isl~eAl~G~~~~i~~ldG~~~  296 (374)
T PRK14293        217 KLKINIPAGVDTGTRLRVSGEGDAGLRGGPPGDLYVYLFVKNDPEFRRDGINILSEIKISYLQAILGDTLEVDTVDGPVE  296 (374)
T ss_pred             EEEEEeCCCCCCCCEEEEccCccCCCCCCCCcCEEEEEEEeCCCccChhhhceEEEeccCHHHHhCCCEEEecCCCCCEE
Confidence            99999999999999999999999877677889999999999999999999999999999999999999999999999988


Q ss_pred             EecCCCCCCCcEEEEccCCCCCCCCCCCCccEEEEEEEEcCCCCCHHHHHHHHHHHhhcC
Q 017925          240 LQVPPGTQPGDVLVLAKKGAPKLNKPSIRGDHLFTVKVTIPNRISAKERELLEELASLRN  299 (363)
Q Consensus       240 l~ip~gtq~g~~~~l~g~G~P~~~~~~~rGDL~V~~~V~~P~~l~~~q~~ll~~l~~~~~  299 (363)
                      |+||+++++|++++|+|+|||..+..+.+|||||+|+|.+|+.|+++|+++|++|+++..
T Consensus       297 i~ip~~~~~g~~~ri~g~G~p~~~~~~~~GDL~v~~~v~~P~~l~~~~~~l~~~l~~~~~  356 (374)
T PRK14293        297 LTIPAGTQPNTVLTLENKGVPRLGNPVARGDHLITVKVKIPTRISDEERELLEKLAKIKG  356 (374)
T ss_pred             EEeCCCCCCCCEEEECCCCCCCCCCCCCcCCEEEEEEEECCCCCCHHHHHHHHHHHhhcc
Confidence            999999999999999999999765544689999999999999999999999999997643

>PRK14283 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=1.9e-60  Score=473.30  Aligned_cols=241  Identities=41%  Similarity=0.798  Sum_probs=230.5

Q ss_pred             CCCCCcEEEEEEeehhhhhcCCeEEEEEeeeEeccCCCCCceeeCceeeeCCCCccccEEEEeeeCCCcceeeeecCCCC
Q 017925           56 VTKGEDLRYDIVLEFSESIFGAEKEFELSHLETCEVCTGTGAKMGSKMRICSTCGGRGQVMRTDQTPFGLFSQVSVCPSC  135 (363)
Q Consensus        56 ~~~g~di~~~l~ltlee~~~G~~~~i~~~~~~~C~~C~GsG~~~g~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C  135 (363)
                      +++++|+.++|.|||+|+|+|+++++.+.+.+.|+.|+|+|...+....+|+.|+|+|.++..+++.+|+++++.+|+.|
T Consensus       116 ~~kg~di~~~l~vsLed~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C  195 (378)
T PRK14283        116 PQRGADIYTEVEITLEEAASGVEKDIKVRHTKKCPVCNGSRAEPGSEVKTCPTCGGTGQVKQVRNTILGQMMNVTTCPDC  195 (378)
T ss_pred             ccCCCCeEEEeeeeHHHHhCCcceEEEeeeeccCCCCCccccCCCCCCccCCCcCCccEEEEEEeccCceEEEEEECCCC
Confidence            35789999999999999999999999999999999999999999888899999999999999999999999999999999


Q ss_pred             CcccEEeceeeeecCCCcEEeeceEEEEEeCCCCCCCcEEEEccCcCCCCCCCCCccEEEEEEEEeccccccCCcceeEE
Q 017925          136 GGEGEVISEYCRKCSGEGRIRLKKNIKVKVPPGVSTGSILRVVGEGDAGPRGGPPGDLYVYLDVEEIPGIQRDGIDLFST  215 (363)
Q Consensus       136 ~G~G~vi~~~C~~C~G~G~v~~~~~l~V~IP~Gv~~G~~irl~G~G~~~~~g~~~GDL~V~i~v~~h~~f~R~G~DL~~~  215 (363)
                      .|+|+.+.++|..|+|.|.+.+.++++|.||||+++|++|+|+|+|++.+.+..+|||||+|+|++|+.|+|+|+||+++
T Consensus       196 ~G~G~~~~~~C~~C~G~g~v~~~~~l~V~IppG~~~G~~i~l~g~G~~~~~~~~~GDLiv~i~v~~~~~f~r~G~DL~~~  275 (378)
T PRK14283        196 QGEGKIVEKPCSNCHGKGVVRETKTISVKIPAGVETGSRLRVSGEGEMGDRGGEPGDLYVVIKVKPHKIFRREGANLYYE  275 (378)
T ss_pred             CccceecCCCCCCCCCceeeccceeEEEEECCCCCCCcEEEEeccccCCCCCCCCccEEEEEEEEcCCCEEEecCCEEEE
Confidence            99999999999999999999999999999999999999999999999977677899999999999999999999999999


Q ss_pred             EEeceEEeecCcEEEEeccCceEEEecCCCCCCCcEEEEccCCCCCCCCCCCCccEEEEEEEEcCCCCCHHHHHHHHHHH
Q 017925          216 ISISYLDAIMGTVVKVKTVEGISELQVPPGTQPGDVLVLAKKGAPKLNKPSIRGDHLFTVKVTIPNRISAKERELLEELA  295 (363)
Q Consensus       216 ~~I~l~eAllG~~~~v~tldG~~~l~ip~gtq~g~~~~l~g~G~P~~~~~~~rGDL~V~~~V~~P~~l~~~q~~ll~~l~  295 (363)
                      +.|+|.+|++|+++.|+||||.+.|+||+++++|++++|+|+|||.... ..+|||||+|+|.||+.|+++|+++|++|+
T Consensus       276 ~~Isl~eAl~G~~~~i~tldG~i~v~ip~g~~~g~~~ri~g~G~p~~~~-~~~GdL~v~~~v~~P~~l~~~q~~ll~~~~  354 (378)
T PRK14283        276 KPISFVQAALGDTVDVPTIDGPVELKIPAGTQSGTTFRLKGHGMPSLRW-SGKGNLYVKVKVVVPKKLSPKQKELLREFA  354 (378)
T ss_pred             EecCHHHHhcCCeEEEEcCCceEEEEeCCCCCCCCEEEECCCCCCCCCC-CCCCCEEEEEEEEeCCCCCHHHHHHHHHHH
Confidence            9999999999999999999998899999999999999999999997654 368999999999999999999999999998


Q ss_pred             hh
Q 017925          296 SL  297 (363)
Q Consensus       296 ~~  297 (363)
                      +.
T Consensus       355 ~~  356 (378)
T PRK14283        355 SI  356 (378)
T ss_pred             hh
Confidence            64

>PRK14291 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=1.7e-60  Score=474.04  Aligned_cols=293  Identities=37%  Similarity=0.714  Sum_probs=246.8

Q ss_pred             CcccccccccCCCCC--CCCCCC----CCChhhhhhhhhCCC-CCC-CCCCCCCCCCCCCCCCCCCCCcEEEEEEeehhh
Q 017925            1 MYDQYGEAGVKSTVG--GGSSAY----TTNPFDLFETFFGPS-MGG-FPGMNQTGFRTRRRSTVTKGEDLRYDIVLEFSE   72 (363)
Q Consensus         1 ~YD~~G~~g~~~g~g--g~~~g~----~~~~~diF~~fFG~~-~gg-~~~~~~~g~~~~~~~~~~~g~di~~~l~ltlee   72 (363)
                      +||+||++++..+.+  ++.++|    ..++.|+|++||+.. +++ |+++++....+....++.+++|+.+.|.|||+|
T Consensus        63 ~YD~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~f~~~f~~fg~~~~fg~~~~~~~~~~~~~~~~~g~di~~~l~vsLee  142 (382)
T PRK14291         63 LYDQFGHAAFSGSGQQQQGQEGFSDFGGGNIEDILEDVFDIFGFGDIFGRRRATRERRKTYQRPVKGEDIYQTVEISLEE  142 (382)
T ss_pred             HHhhhcccccccccCccccccccccccCCCHHHHHHHHHHhccccccccccccccccccccccccCCCCEEEEEEEEHHH
Confidence            599999988754211  111122    125678899986421 111 111100000000112345799999999999999


Q ss_pred             hhcCCeEEEEEeeeEeccCCCCCceeeCceeeeCCCCccccEEEEeeeCCCcceeeeecCCCCCcccEEeceeeeecCCC
Q 017925           73 SIFGAEKEFELSHLETCEVCTGTGAKMGSKMRICSTCGGRGQVMRTDQTPFGLFSQVSVCPSCGGEGEVISEYCRKCSGE  152 (363)
Q Consensus        73 ~~~G~~~~i~~~~~~~C~~C~GsG~~~g~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~vi~~~C~~C~G~  152 (363)
                      +|+|++++|.+.+.+.|..|+|+|++.+....+|+.|+|+|.++..    .|+++++++|+.|+|+|. +.++|..|+|.
T Consensus       143 ~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~----~g~~~~~~~C~~C~G~G~-~~~~C~~C~G~  217 (382)
T PRK14291        143 AYTGTTVSLEVPRYVPCEACGGTGYDPGSGEKVCPTCGGSGEIYQR----GGFFRISQTCPTCGGEGV-LREPCSKCNGR  217 (382)
T ss_pred             hhCCEEEEEEEeeeccCCCCccccCCCCCCCccCCCCCCceEEEEe----cceEEEEecCCCCCCceE-EccCCCCCCCC
Confidence            9999999999999999999999999999889999999999987664    267777899999999994 78999999999


Q ss_pred             cEEeeceEEEEEeCCCCCCCcEEEEccCcCCCCCCCCCccEEEEEEEEeccccccCCcceeEEEEeceEEeecCcEEEEe
Q 017925          153 GRIRLKKNIKVKVPPGVSTGSILRVVGEGDAGPRGGPPGDLYVYLDVEEIPGIQRDGIDLFSTISISYLDAIMGTVVKVK  232 (363)
Q Consensus       153 G~v~~~~~l~V~IP~Gv~~G~~irl~G~G~~~~~g~~~GDL~V~i~v~~h~~f~R~G~DL~~~~~I~l~eAllG~~~~v~  232 (363)
                      |++++.++|+|+||||+.+|++|+|+|+|++++.++++|||||+|++++|+.|+|+|+||++++.|+|.+||+|++++|+
T Consensus       218 g~v~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~~g~~~GDL~v~i~~~~h~~F~r~G~DL~~~~~Isl~eAl~G~~~~i~  297 (382)
T PRK14291        218 GLVIKKETIKVRIPPGVDNGSKLRVPGKGHAGRFGGPPGDLYIIVKVKPHPLFERRGDNLYLDVNITVAEAVLGTELEVP  297 (382)
T ss_pred             ceEEeeeEEEEEeCCCCCCCCEEEEecCcCCCCCCCCCccEEEEEEEccCCCeeeecCCeEEEEEeeHHHHhCCCEEEEe
Confidence            99999999999999999999999999999998878899999999999999999999999999999999999999999999


Q ss_pred             ccCce-EEEecCCCCCCCcEEEEccCCCCCCCCCCCCccEEEEEEEEcCC--CCC------HHHHHHHHHHHhhcC
Q 017925          233 TVEGI-SELQVPPGTQPGDVLVLAKKGAPKLNKPSIRGDHLFTVKVTIPN--RIS------AKERELLEELASLRN  299 (363)
Q Consensus       233 tldG~-~~l~ip~gtq~g~~~~l~g~G~P~~~~~~~rGDL~V~~~V~~P~--~l~------~~q~~ll~~l~~~~~  299 (363)
                      |+||+ ++|+||+|+++|++++|+|+|||..+. ..+|||||+|+|.||+  .||      ++|++||++|+++..
T Consensus       298 ~ldG~~l~V~Ip~g~~~G~~i~i~G~G~p~~~~-~~~GDL~V~~~V~~P~~~~ls~~~~~~~~~~~~~~~l~~~~~  372 (382)
T PRK14291        298 LLDGKKEKVKIPPGTKEGDKIRVPGKGMPRLKG-SGYGDLVVRVHIDVPKISMLSKLMGDGKKAKKLLKELDKLLP  372 (382)
T ss_pred             cCCCCEEEEEECCccCCCCEEEECCCCCCCCCC-CCCCCEEEEEEEEeCCCcCcCccccCCHHHHHHHHHHHhhcC
Confidence            99997 789999999999999999999998654 3689999999999998  599      999999999997664

>PRK14290 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=6.7e-60  Score=467.37  Aligned_cols=289  Identities=34%  Similarity=0.653  Sum_probs=244.7

Q ss_pred             CcccccccccCCCCCC-CCCCC--CCChhhhhhhhhCCCCCCCCCCCCCCCCCCCCCCCCCCCcEEEEEEeehhhhhcCC
Q 017925            1 MYDQYGEAGVKSTVGG-GSSAY--TTNPFDLFETFFGPSMGGFPGMNQTGFRTRRRSTVTKGEDLRYDIVLEFSESIFGA   77 (363)
Q Consensus         1 ~YD~~G~~g~~~g~gg-~~~g~--~~~~~diF~~fFG~~~gg~~~~~~~g~~~~~~~~~~~g~di~~~l~ltlee~~~G~   77 (363)
                      +||+||++++++++++ ++++|  ..++.|+|++|||+.+++  ... ++.++ ..+.+++++|+.+.|.|||+|+|+|+
T Consensus        65 ~yd~~G~~~~~~~~~~~~~~~~~~~~~~~d~f~~~fg~~~~~--~~~-~~~~~-~~~~~~~~~di~~~l~lsLee~~~G~  140 (365)
T PRK14290         65 QYDQTGTVDFGAGGSNFNWDNFTHFSDINDIFNQIFGGNFGS--DFF-SGFGN-QQSTRNIDLDIYTNLDISLEDAYYGT  140 (365)
T ss_pred             hhcccCCcccccCCCCccccccccccchhHHHHHHhcCcccc--ccc-ccccc-ccCCCCCCCCEEEEEEecHHHhcCCE
Confidence            5999999888632111 10111  136779999999842111  000 00001 11112358999999999999999999


Q ss_pred             eEEEEEeeeEeccCCCCCceeeCceeeeCCCCccccEEEEeeeCCCcceee--eecCCCCCcccEEeceeeeecCCCcEE
Q 017925           78 EKEFELSHLETCEVCTGTGAKMGSKMRICSTCGGRGQVMRTDQTPFGLFSQ--VSVCPSCGGEGEVISEYCRKCSGEGRI  155 (363)
Q Consensus        78 ~~~i~~~~~~~C~~C~GsG~~~g~~~~~C~~C~G~G~~~~~~~~~~G~~~~--~~~C~~C~G~G~vi~~~C~~C~G~G~v  155 (363)
                      +++|.+.+.+.|+.|+|+|...+ ...+|+.|+|+|.++..++  +|++++  ..+|+.|.|.|+++.++|..|+|.|++
T Consensus       141 ~~~i~~~r~~~C~~C~G~g~~~~-~~~~C~~C~G~G~~~~~~~--~g~~~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v  217 (365)
T PRK14290        141 EKRIKYRRNAMCPDCSGTGAKNG-KLITCPTCHGTGQQRIVRG--QGFFRMVTVTTCRTCGGRGRIPEEKCPRCNGTGTV  217 (365)
T ss_pred             EEEEEeeecccCCCCccccCCCC-CCccCCCCCCcCEEEEEec--cCeEEEEEEEeCCCCCCceeEccCCCCCCCCceeE
Confidence            99999999999999999999876 5789999999998776654  566544  489999999999999999999999999


Q ss_pred             eeceEEEEEeCCCCCCCcEEEEccCcCCCCCCCCCccEEEEEEEEeccccccCCcceeEEEEeceEEeecCcEEEEeccC
Q 017925          156 RLKKNIKVKVPPGVSTGSILRVVGEGDAGPRGGPPGDLYVYLDVEEIPGIQRDGIDLFSTISISYLDAIMGTVVKVKTVE  235 (363)
Q Consensus       156 ~~~~~l~V~IP~Gv~~G~~irl~G~G~~~~~g~~~GDL~V~i~v~~h~~f~R~G~DL~~~~~I~l~eAllG~~~~v~tld  235 (363)
                      +..++|+|+||||+.+|++|+|+|+|+.  .++++|||||+|++++|+.|+|+|+||+++++|+|.+||+|+++.|+|++
T Consensus       218 ~~~~~~~V~Ip~G~~~G~~i~~~g~G~~--~~~~~GDL~v~v~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~I~~~~  295 (365)
T PRK14290        218 VVNEDISVKIPKGATDNLRLRVKGKGQS--YGGRTGDLYVVLRVNNDPNIQRINDDLYVDQKINFPQAALGGEIEIKLFR  295 (365)
T ss_pred             EEeeEEEEEECCCCCCCcEEEEccccCC--CCCCCCCEEEEEEEcCCCCEEEecCCEEEEEEeCHHHHhCCCEEEEEcCC
Confidence            9999999999999999999999999986  37789999999999999999999999999999999999999999999999


Q ss_pred             ceEEEecCCCCCCCcEEEEccCCCCCCCCCCCCccEEEEEEEEcCCCCCHHHHHHHHHHHhhcC
Q 017925          236 GISELQVPPGTQPGDVLVLAKKGAPKLNKPSIRGDHLFTVKVTIPNRISAKERELLEELASLRN  299 (363)
Q Consensus       236 G~~~l~ip~gtq~g~~~~l~g~G~P~~~~~~~rGDL~V~~~V~~P~~l~~~q~~ll~~l~~~~~  299 (363)
                      |.++|+||+++++|++++|+|+|||..+.. .+|||||+|+|.+|+.|+++|++||++|+.++.
T Consensus       296 g~i~V~Ip~g~~~g~~iri~g~G~p~~~~~-~~GDL~V~~~V~~P~~l~~~~~~ll~~~~~~~~  358 (365)
T PRK14290        296 EKYNLKIPEGTQPGEVLKIKGAGMPHLNGH-GSGDLLVRINVEVPKRLTSKQKELIREFFDIKE  358 (365)
T ss_pred             ceEEEEECCccCCCcEEEECCCCCCCCCCC-CCCCEEEEEEEECCCCCCHHHHHHHHHHHHhhh
Confidence            999999999999999999999999976543 589999999999999999999999999987654

>KOG0712 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=100.00  E-value=8.7e-52  Score=397.32  Aligned_cols=269  Identities=36%  Similarity=0.706  Sum_probs=241.3

Q ss_pred             CcccccccccCCCCCCCCCCCCCChhhhhhhhhCCCCCCCCCCCCCCCCCCCCCCCCCCCcEEEEEEeehhhhhcCCeEE
Q 017925            1 MYDQYGEAGVKSTVGGGSSAYTTNPFDLFETFFGPSMGGFPGMNQTGFRTRRRSTVTKGEDLRYDIVLEFSESIFGAEKE   80 (363)
Q Consensus         1 ~YD~~G~~g~~~g~gg~~~g~~~~~~diF~~fFG~~~gg~~~~~~~g~~~~~~~~~~~g~di~~~l~ltlee~~~G~~~~   80 (363)
                      +||+||++++++|+++  +|++    . |++||+  +|+.+        ++   .+.+|+|+.+.|+|||+|+|.|.+++
T Consensus        62 ~yD~~g~~~~~~g~~~--~g~~----~-f~~~F~--~g~~~--------~~---~~~rg~~~~~~~~~~Le~~y~G~s~k  121 (337)
T KOG0712|consen   62 IYDQYGEEGLQGGGGG--GGFG----G-FSQFFG--FGGNG--------GR---GRQRGKDVVHQLKVTLEELYMGKSKK  121 (337)
T ss_pred             HHHhhhhhhhcccCCC--CCCc----c-HHHhcc--CCCcC--------cc---ccccCCCceEEEEEEHHHhhcCCccc
Confidence            6999999999765322  2221    2 889997  22211        11   12349999999999999999999999


Q ss_pred             EEEeeeEeccCCCCCceeeCceeeeCCCCccccEEEEeeeCCCcceeee-ecCCCCCcccEEe--ceeeeecCCCcEEee
Q 017925           81 FELSHLETCEVCTGTGAKMGSKMRICSTCGGRGQVMRTDQTPFGLFSQV-SVCPSCGGEGEVI--SEYCRKCSGEGRIRL  157 (363)
Q Consensus        81 i~~~~~~~C~~C~GsG~~~g~~~~~C~~C~G~G~~~~~~~~~~G~~~~~-~~C~~C~G~G~vi--~~~C~~C~G~G~v~~  157 (363)
                      +.++++.+|+.|+|+|.++++.+ .|+.|.|+|...++.++.+|++|++ .+|..|+|.|.+|  .+.|+.|.|.++++.
T Consensus       122 l~l~~~~iCs~C~GsGgksg~~~-~C~~C~GsGv~~~~~~~gPg~~qs~q~~C~~C~G~G~~~~~kd~C~~C~G~~~v~~  200 (337)
T KOG0712|consen  122 LFLSRNFICSKCSGSGGKSGSAP-KCTTCRGSGVQTRTRQMGPGMVQSPQLVCDSCNGSGETISLKDRCKTCSGAKVVRE  200 (337)
T ss_pred             eecccCccCCcCCCCCCCCCCCC-CCCCCCCCCceeEEEeccccccccceeEeccCCCccccccccccCcccccchhhhh
Confidence            99999999999999999988764 8999999999999999999999987 7999999999984  689999999999999


Q ss_pred             ceEEEEEeCCCCCCCcEEEEccCcCCCCCCCCCccEEEEEEEEeccccccCCcceeEEEEeceEEeecCcEEEEeccCce
Q 017925          158 KKNIKVKVPPGVSTGSILRVVGEGDAGPRGGPPGDLYVYLDVEEIPGIQRDGIDLFSTISISYLDAIMGTVVKVKTVEGI  237 (363)
Q Consensus       158 ~~~l~V~IP~Gv~~G~~irl~G~G~~~~~g~~~GDL~V~i~v~~h~~f~R~G~DL~~~~~I~l~eAllG~~~~v~tldG~  237 (363)
                      .+.++|.|++|+.++++|.+.|++++.+ +..+||+++.|..++|+.|.|.++||++..+|+|.||++|+...+.||||+
T Consensus       201 kkil~v~V~~g~~~~~ki~f~geadea~-g~~pgD~vl~i~~k~h~~F~Rrg~dL~~~~~i~l~eal~G~~~~~~~ldGr  279 (337)
T KOG0712|consen  201 KKILEVHVEPGMPHGQKITFKGEADEAP-GTKPGDVVLLIDQKEHPGFDRRGSDLYRKLTISLVEALCGFQRVWETLDGR  279 (337)
T ss_pred             hheeeccccCCCcccceeeeeeeeeecC-CCcCccEEEEecccccccceecccccceeeecchhhccccceEEEEccCCc
Confidence            9999999999999999999999999876 456999999999999999999999999999999999999999999999998


Q ss_pred             -EEEecCCC--CCCCcEEEEccCCCCCCCCCCCCccEEEEEEEEcCCCCCHHHHHHHHHH
Q 017925          238 -SELQVPPG--TQPGDVLVLAKKGAPKLNKPSIRGDHLFTVKVTIPNRISAKERELLEEL  294 (363)
Q Consensus       238 -~~l~ip~g--tq~g~~~~l~g~G~P~~~~~~~rGDL~V~~~V~~P~~l~~~q~~ll~~l  294 (363)
                       ++|.++||  ++||++++|+|+|||+.+++  +|||||+|+|+||+ |++++..+|+.+
T Consensus       280 ~l~~~~~pg~vi~~~~~~~v~~~gmp~~~~~--~g~lyi~~~v~fp~-~~~~~~~~l~~~  336 (337)
T KOG0712|consen  280 LLKLSSKPGEVISPGDTKRVEGEGMPIFRNP--KGDLYIKFEVKFPK-LSPSQLKMLEDL  336 (337)
T ss_pred             eEEEecCCCceeChhHEEeecCCCcccccCC--CCcEEEEEEEEcCC-CChHHHHHHHhh
Confidence             68999998  89999999999999999876  89999999999999 999999999876

>PRK14299 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=6.1e-42  Score=329.62  Aligned_cols=214  Identities=35%  Similarity=0.647  Sum_probs=172.3

Q ss_pred             CcccccccccCCCC-----C-CCCCCCC----CChhhhhhhhhCCCCCCCCCCCCCCCCCCCCCCCCCCCcEEEEEEeeh
Q 017925            1 MYDQYGEAGVKSTV-----G-GGSSAYT----TNPFDLFETFFGPSMGGFPGMNQTGFRTRRRSTVTKGEDLRYDIVLEF   70 (363)
Q Consensus         1 ~YD~~G~~g~~~g~-----g-g~~~g~~----~~~~diF~~fFG~~~gg~~~~~~~g~~~~~~~~~~~g~di~~~l~ltl   70 (363)
                      +||+||++++..+.     + +++++|.    .++.|+|++|||+. +++++++ ..+.. .....++|.|+++.+.|||
T Consensus        64 ~yD~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~f~~~fgg~-~~~~~~g-~~~~~-~~~~~~~g~dl~~~l~isL  140 (291)
T PRK14299         64 IYDTYGTTAASAGWQGPPPGPPGGGDFSGFNVGDFSDFFQQLFGGR-GGFGGFG-DLFGS-VGRRARKGRDLEAELPLTL  140 (291)
T ss_pred             HHHhcCCccccccccCCCCCCCCCCCccccCcCCHHHHHHHHhCCC-CCCCCcc-ccccc-ccCCCCCCCCEEEEEEecH
Confidence            49999998654211     0 1111221    25668999999741 1111110 00111 0112457899999999999


Q ss_pred             hhhhcCCeEEEEEeeeEeccCCCCCceeeCceeeeCCCCccccEEEEeeeCCCcceeeeecCCCCCcccEEeceeeeecC
Q 017925           71 SESIFGAEKEFELSHLETCEVCTGTGAKMGSKMRICSTCGGRGQVMRTDQTPFGLFSQVSVCPSCGGEGEVISEYCRKCS  150 (363)
Q Consensus        71 ee~~~G~~~~i~~~~~~~C~~C~GsG~~~g~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~vi~~~C~~C~  150 (363)
                      +|+|.|+++++++.                                                                  
T Consensus       141 ~ea~~G~~~~i~l~------------------------------------------------------------------  154 (291)
T PRK14299        141 EEAYRGGEKVVEVA------------------------------------------------------------------  154 (291)
T ss_pred             HHHhCCCeEEEeeC------------------------------------------------------------------
Confidence            99999999887542                                                                  


Q ss_pred             CCcEEeeceEEEEEeCCCCCCCcEEEEccCcCCCCCCCCCccEEEEEEEEeccccccCCcceeEEEEeceEEeecCcEEE
Q 017925          151 GEGRIRLKKNIKVKVPPGVSTGSILRVVGEGDAGPRGGPPGDLYVYLDVEEIPGIQRDGIDLFSTISISYLDAIMGTVVK  230 (363)
Q Consensus       151 G~G~v~~~~~l~V~IP~Gv~~G~~irl~G~G~~~~~g~~~GDL~V~i~v~~h~~f~R~G~DL~~~~~I~l~eAllG~~~~  230 (363)
                             .++++|+||||+.+|++|+++|+|++.      |||||+|++++|+.|+|+|+|||++++|+|.+||+|++++
T Consensus       155 -------g~~~~V~Ip~G~~~G~~ir~~g~G~~~------GDL~v~i~v~~h~~f~R~G~DL~~~~~Isl~eAl~G~~~~  221 (291)
T PRK14299        155 -------GERLSVRIPPGVREGQVIRLAGKGRQG------GDLYLVVRLLPHPVFRLEGDDLYATVDVPAPIAVVGGKVR  221 (291)
T ss_pred             -------CEEEEEecCCCcCCCcEEEECCCCCCC------CCEEEEEEEcCCCCeEEECCEEEEEEecCHHHHhCCCEEE
Confidence                   146889999999999999999999863      9999999999999999999999999999999999999999


Q ss_pred             EeccCceEEEecCCCCCCCcEEEEccCCCCCCCCCCCCccEEEEEEEEcCCCCCHHHHHHHHHHHhhc
Q 017925          231 VKTVEGISELQVPPGTQPGDVLVLAKKGAPKLNKPSIRGDHLFTVKVTIPNRISAKERELLEELASLR  298 (363)
Q Consensus       231 v~tldG~~~l~ip~gtq~g~~~~l~g~G~P~~~~~~~rGDL~V~~~V~~P~~l~~~q~~ll~~l~~~~  298 (363)
                      |+||||.++|+||+++++|++++|+|+|||..  ++.+|||||+|+|.+|+.|+++|+++|++|++..
T Consensus       222 v~tldG~~~v~ip~~~~~g~~~rl~g~G~p~~--~~~~GDL~v~~~V~~P~~l~~~~~~~l~~l~~~~  287 (291)
T PRK14299        222 VMTLDGPVEVTIPPRTQAGRKLRLKGKGWPRG--PAGRGDQYAEVRITIPTRPTPEEERLYKQLAELY  287 (291)
T ss_pred             EECCCCCEEEEeCCCcCCCCEEEECCCCCCCC--CCCCCCEEEEEEEECCCCCCHHHHHHHHHHHhhh
Confidence            99999998999999999999999999999963  2468999999999999999999999999998754

>PRK10266 curved DNA-binding protein CbpA; Provisional

Probab=100.00  E-value=4.2e-41  Score=325.98  Aligned_cols=202  Identities=26%  Similarity=0.485  Sum_probs=171.5

Q ss_pred             ChhhhhhhhhCCCCCCCCCCCCCCCCCCCCCCCCCCCcEEEEEEeehhhhhcCCeEEEEEeeeEeccCCCCCceeeCcee
Q 017925           24 NPFDLFETFFGPSMGGFPGMNQTGFRTRRRSTVTKGEDLRYDIVLEFSESIFGAEKEFELSHLETCEVCTGTGAKMGSKM  103 (363)
Q Consensus        24 ~~~diF~~fFG~~~gg~~~~~~~g~~~~~~~~~~~g~di~~~l~ltlee~~~G~~~~i~~~~~~~C~~C~GsG~~~g~~~  103 (363)
                      ++.|+|+.|||+.    ++.      + +....+++.|+.+++.|||+|+|+|+.+++.+.+.+    |           
T Consensus        93 ~~~~~f~~~~g~~----~~~------~-~~~~~~kg~di~~~v~isLee~~~G~~k~i~~~~~~----~-----------  146 (306)
T PRK10266         93 DFDDIFSSIFGQH----ARQ------S-RQRPAARGHDIEIEVAVFLEETLTEHKRTISYNLPV----Y-----------  146 (306)
T ss_pred             CHHHHHHHHhCCC----CCC------C-CCCCCCCCCceEEEEEEEHHHhcCCceEEEEEeccc----c-----------
Confidence            5678999999731    110      0 111235789999999999999999999999886532    2           


Q ss_pred             eeCCCCccccEEEEeeeCCCcceeeeecCCCCCcccEEeceeeeecCCCcEEeeceEEEEEeCCCCCCCcEEEEccCcCC
Q 017925          104 RICSTCGGRGQVMRTDQTPFGLFSQVSVCPSCGGEGEVISEYCRKCSGEGRIRLKKNIKVKVPPGVSTGSILRVVGEGDA  183 (363)
Q Consensus       104 ~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~vi~~~C~~C~G~G~v~~~~~l~V~IP~Gv~~G~~irl~G~G~~  183 (363)
                            .|.|.+..                                      ...++++|+||+|+++|++|+++|+|++
T Consensus       147 ------~g~G~~~~--------------------------------------~~~~~~~V~Ip~G~~~G~~i~~~g~G~~  182 (306)
T PRK10266        147 ------NAFGMIEQ--------------------------------------EIPKTLNVKIPAGVGNGQRIRLKGQGTP  182 (306)
T ss_pred             ------cCCCeEEE--------------------------------------eeeEEEEEEECCCCcCCcEEEEecCCcC
Confidence                  22232110                                      1136899999999999999999999999


Q ss_pred             CCCCCCCccEEEEEEEEeccccccCCcceeEEEEeceEEeecCcEEEEeccCceEEEecCCCCCCCcEEEEccCCCCCCC
Q 017925          184 GPRGGPPGDLYVYLDVEEIPGIQRDGIDLFSTISISYLDAIMGTVVKVKTVEGISELQVPPGTQPGDVLVLAKKGAPKLN  263 (363)
Q Consensus       184 ~~~g~~~GDL~V~i~v~~h~~f~R~G~DL~~~~~I~l~eAllG~~~~v~tldG~~~l~ip~gtq~g~~~~l~g~G~P~~~  263 (363)
                      .+++..+|||||+|+++||+.|+|+|+||+++++|||.+|++|+++.|+|+||++.|+||+++++|++++|+|+|||..+
T Consensus       183 ~~~~~~~GDl~v~i~v~ph~~f~r~g~DL~~~~~Isl~~al~G~~~~i~~~~g~v~v~ip~g~~~g~~~ri~g~G~p~~~  262 (306)
T PRK10266        183 GENGGPNGDLWLVIHIAPHPLFDIVGQDLEIVVPLAPWEAALGAKVTVPTLKESILLTIPPGSQAGQRLRVKGKGLVSKK  262 (306)
T ss_pred             CCCCCCCccEEEEEEEcCCCCeEEeCCceEEEEecCHHHHhCCCEEEeeCCCccEEEEeCCCcCCCCEEEECCCCCCCCC
Confidence            87778899999999999999999999999999999999999999999999999999999999999999999999999642


Q ss_pred             CCCCCccEEEEEEEEcCCCCCHHHHHHHHHHHhhc
Q 017925          264 KPSIRGDHLFTVKVTIPNRISAKERELLEELASLR  298 (363)
Q Consensus       264 ~~~~rGDL~V~~~V~~P~~l~~~q~~ll~~l~~~~  298 (363)
                         .+|||||+|+|.+|++|+++|++||++|+++.
T Consensus       263 ---~~GdL~v~~~v~~P~~l~~~q~~l~~~l~~~~  294 (306)
T PRK10266        263 ---QTGDLYAVLKIVMPPKPDEKTAALWQQLADAQ  294 (306)
T ss_pred             ---CCCCEEEEEEEECCCCCCHHHHHHHHHHHhhc
Confidence               58999999999999999999999999999763

>TIGR03835 termin_org_DnaJ terminal organelle assembly protein TopJ

Probab=100.00  E-value=7.3e-33  Score=285.82  Aligned_cols=161  Identities=17%  Similarity=0.153  Sum_probs=140.9

Q ss_pred             CCCcEEEEEEeehhhhhcCCeEEEEEeeeEeccCCCCCceeeCceeeeCCCCccccEEEEeeeCCCcceeeeecCCCCCc
Q 017925           58 KGEDLRYDIVLEFSESIFGAEKEFELSHLETCEVCTGTGAKMGSKMRICSTCGGRGQVMRTDQTPFGLFSQVSVCPSCGG  137 (363)
Q Consensus        58 ~g~di~~~l~ltlee~~~G~~~~i~~~~~~~C~~C~GsG~~~g~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G  137 (363)
                      ..-||.+.|.|+|+++|+|++++|++.|.+.|    |.|                                         
T Consensus       655 ~~~dI~y~l~vtLEeLY~G~tKkIKitR~V~~----g~G-----------------------------------------  689 (871)
T TIGR03835       655 TNVNLVYEEEVPQILFFNNQIKEIKYTRHTVD----GNT-----------------------------------------  689 (871)
T ss_pred             cccceEEecccCHHHHhCCCeEEEEEEEeecc----CCC-----------------------------------------
Confidence            34589999999999999999999999876543    111                                         


Q ss_pred             ccEEeceeeeecCCCcEEeeceEEEEEeCCCCCCCcEEEEccCcCCCCCCCCCccEEEEEEEEeccccccCCcceeEEEE
Q 017925          138 EGEVISEYCRKCSGEGRIRLKKNIKVKVPPGVSTGSILRVVGEGDAGPRGGPPGDLYVYLDVEEIPGIQRDGIDLFSTIS  217 (363)
Q Consensus       138 ~G~vi~~~C~~C~G~G~v~~~~~l~V~IP~Gv~~G~~irl~G~G~~~~~g~~~GDL~V~i~v~~h~~f~R~G~DL~~~~~  217 (363)
                                    ...++..++|+|+||||+.+|++|+|+|+|+.+++ + +|||||+|++++|+.|+|+|+|||++++
T Consensus       690 --------------~ktvkE~ktLeVkIPpGVkdGqkIRf~GeGDegpg-g-~GDLyVvIkVKPHp~FrRdGdDL~~~v~  753 (871)
T TIGR03835       690 --------------ESTTNEAITLEIQLPITSQLNISAIFKGFGHDFGN-G-CGDLKVVFKVIPSNFFQIKNDGLHVAAL  753 (871)
T ss_pred             --------------cceeeeeEEEEEecCCCCCCCCEEEeccccCCCCC-C-CCCEEEEEEEcCCCCeEEECCeEEEEEe
Confidence                          11234467999999999999999999999998653 3 4999999999999999999999999999


Q ss_pred             eceEEeecCcEEEEeccCceEEEecCCCCCCCcEEEEccCCCCCCCCCCCCccEEEEEEEEc-CC
Q 017925          218 ISYLDAIMGTVVKVKTVEGISELQVPPGTQPGDVLVLAKKGAPKLNKPSIRGDHLFTVKVTI-PN  281 (363)
Q Consensus       218 I~l~eAllG~~~~v~tldG~~~l~ip~gtq~g~~~~l~g~G~P~~~~~~~rGDL~V~~~V~~-P~  281 (363)
                      |+|.+||||+++.|+||||++.|+||++++||+++||+|+|||..+  +.||||||+|+|.- ++
T Consensus       754 ISL~EALLGgtIeIpTLDGrVkLkIPpgTqpGqvLRIkGKGMP~~~--~~RGDLyV~f~V~~~~k  816 (871)
T TIGR03835       754 VDPLVAYNGGIIDVFGPNKLFNVRIPGGIKVNDQVIFKDLGLTKTK--YDKGSLIVHLYYSSVMK  816 (871)
T ss_pred             cCHHHHhcCCEEEeeCCCCCEEEeeCCCCCCCcEEEECCCCCCCCC--CCCCCEEEEEEEeeccc
Confidence            9999999999999999999989999999999999999999999543  46899999999974 44

This model describes TopJ (MG_200, CbpA), a DnaJ homolog and probable assembly protein of the Mycoplasma terminal organelle. The terminal organelle is involved in both cytadherence and gliding motility.

>KOG0715 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=99.89  E-value=1.6e-23  Score=200.87  Aligned_cols=186  Identities=37%  Similarity=0.748  Sum_probs=160.0

Q ss_pred             CcccccccccCCCCCCCCCCCCCChhhhhhhhhCCCCCCCCCCCCCCCCCCCCCCCCCCCcEEEEEEeehhhhhcCCeEE
Q 017925            1 MYDQYGEAGVKSTVGGGSSAYTTNPFDLFETFFGPSMGGFPGMNQTGFRTRRRSTVTKGEDLRYDIVLEFSESIFGAEKE   80 (363)
Q Consensus         1 ~YD~~G~~g~~~g~gg~~~g~~~~~~diF~~fFG~~~gg~~~~~~~g~~~~~~~~~~~g~di~~~l~ltlee~~~G~~~~   80 (363)
                      .||+||.++.        +++..+++|+|..+|++      .          ..+...+.++.+.+.++|++|.+|+.+.
T Consensus       103 ~YD~~~~~~~--------~~~~g~~~~~~~~~~~~------~----------~~~~~~~~~~~~d~~~~f~~A~~g~~~~  158 (288)
T KOG0715|consen  103 EYDVYGLEQH--------GEFGGNPFDVFLEFFGG------K----------MNKRVPDKDQYYDLSLDFKEAVRGSKKR  158 (288)
T ss_pred             HHHHhhhhcc--------ccccCCccchHHHhhcc------c----------ccccccCcccccccccCHHHHhhccccc
Confidence            4999998761        11223789999999973      0          1123456788999999999999999999


Q ss_pred             EEEeeeEeccCCCCCceeeCceeeeCCCCccccEEEEeeeCCCcceeeeecCCCCCcccEEeceeeeecCCCcEEeeceE
Q 017925           81 FELSHLETCEVCTGTGAKMGSKMRICSTCGGRGQVMRTDQTPFGLFSQVSVCPSCGGEGEVISEYCRKCSGEGRIRLKKN  160 (363)
Q Consensus        81 i~~~~~~~C~~C~GsG~~~g~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~vi~~~C~~C~G~G~v~~~~~  160 (363)
                      +.+.....|.+|.|.|++++.+...|..|.|+|.+....+.+|   ... +|..|.+.|.++.+.|..|.|.+.|...+.
T Consensus       159 ~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f---~~~-~~~~c~~~~~~~~~~c~~~~g~~~v~~~k~  234 (288)
T KOG0715|consen  159 ISFNVLSDCETCFGSGAEEGAKRESCKTCSGRGLVSNPKEDPF---ILY-TCSYCLGRGLVLRDNCQACSGAGQVRRAKD  234 (288)
T ss_pred             eEEEeecccccccCcCcccccccccchhhhCcccccccccCCc---cee-ecccccccceeccchHHHhhcchhhhhhee
Confidence            9999999999999999999999999999999997665444333   333 999999999999999999999999999999


Q ss_pred             EEEEeCCCCCCCcEEEEccCcCCCCCCCCCccEEEEEEEEeccccccCCcceeEEEEeceEE
Q 017925          161 IKVKVPPGVSTGSILRVVGEGDAGPRGGPPGDLYVYLDVEEIPGIQRDGIDLFSTISISYLD  222 (363)
Q Consensus       161 l~V~IP~Gv~~G~~irl~G~G~~~~~g~~~GDL~V~i~v~~h~~f~R~G~DL~~~~~I~l~e  222 (363)
                      +.|.+|+|+.++.+|++.+.+..        ||+|.+.|.+++.|+|+|.||++++.|++.+
T Consensus       235 i~i~~~~g~~~~~~l~~~~~~~~--------~l~v~~~v~~~~~~~r~~~~i~~~~~i~~~~  288 (288)
T KOG0715|consen  235 IMIVLPAGVRSADTLRFAGHGND--------DLFVRLIVAKSPSFRREGKDILYDAIISFTQ  288 (288)
T ss_pred             EEeecCcccccccEEEEecCCcc--------eEEEEEEeccCcccccccCcccccccccccC
Confidence            99999999999999999987753        9999999999999999999999999999864

>PF01556 CTDII: DnaJ C terminal domain; InterPro: IPR002939 Molecular chaperones are a diverse family of proteins that function to protect proteins in the intracellular milieu from irreversible aggregation during synthesis and in times of cellular stress

Probab=99.88  E-value=6.6e-23  Score=161.13  Aligned_cols=80  Identities=38%  Similarity=0.737  Sum_probs=70.5

Q ss_pred             ceeEEEEeceEEeecCcEEEEeccCc-eEEEecCCCCCCCcEEEEccCCCCCCCCCCCCccEEEEEEEEcCCCCCHHHHH
Q 017925          211 DLFSTISISYLDAIMGTVVKVKTVEG-ISELQVPPGTQPGDVLVLAKKGAPKLNKPSIRGDHLFTVKVTIPNRISAKERE  289 (363)
Q Consensus       211 DL~~~~~I~l~eAllG~~~~v~tldG-~~~l~ip~gtq~g~~~~l~g~G~P~~~~~~~rGDL~V~~~V~~P~~l~~~q~~  289 (363)
                      |||++++|+|++|++|++++|+|+|| .++|+||+++++|++++|+|+|||...+++.+|||||+|+|.+|++||++||+
T Consensus         1 DL~~~~~I~l~~al~G~~i~i~~l~g~~~~i~ip~~~~~g~~~~i~g~G~p~~~~~~~~GdL~v~~~V~~P~~ls~~qk~   80 (81)
T PF01556_consen    1 DLYCTIPISLKEALLGGTISIPTLDGKTIKIKIPPGTQPGQQLRIKGKGMPKPKGGGKRGDLIVKFEVEFPKKLSPEQKE   80 (81)
T ss_dssp             EEEEEEEEEHHHHHH-EEEEEE-TTS-EEEEEETST-STT-EEEETTESEEESSSTTSBEEEEEEEEEE--SSTSHHHHH
T ss_pred             CeEEEEEeCHHHHhCCCEEEEECCCCCEEEEeccCccCCCcEEeecCCCCCcCCCCCCcCCEEEEEEEECCCCCCHHHhc
Confidence            89999999999999999999999999 58999999999999999999999988776689999999999999999999998


Q ss_pred             H
Q 017925          290 L  290 (363)
Q Consensus       290 l  290 (363)
                      |
T Consensus        81 l   81 (81)
T PF01556_consen   81 L   81 (81)
T ss_dssp             H
T ss_pred             C
Confidence            6

The bacterial molecular chaperone DnaK is an enzyme that couples cycles of ATP binding, hydrolysis, and ADP release by an N-terminal ATP-hydrolizing domain to cycles of sequestration and release of unfolded proteins by a C-terminal substrate binding domain. Dimeric GrpE is the co-chaperone for DnaK, and acts as a nucleotide exchange factor, stimulating the rate of ADP release 5000-fold []. DnaK is itself a weak ATPase; ATP hydrolysis by DnaK is stimulated by its interaction with another co-chaperone, DnaJ. Thus the co-chaperones DnaJ and GrpE are capable of tightly regulating the nucleotide-bound and substrate-bound state of DnaK in ways that are necessary for the normal housekeeping functions and stress-related functions of the DnaK molecular chaperone cycle. Besides stimulating the ATPase activity of DnaK through its J-domain, DnaJ also associates with unfolded polypeptide chains and prevents their aggregation []. Thus, DnaK and DnaJ may bind to one and the same polypeptide chain to form a ternary complex. The formation of a ternary complex may result in cis-interaction of the J-domain of DnaJ with the ATPase domain of DnaK. An unfolded polypeptide may enter the chaperone cycle by associating first either with ATP-liganded DnaK or with DnaJ. DnaK interacts with both the backbone and side chains of a peptide substrate; it thus shows binding polarity and admits only L-peptide segments. In contrast, DnaJ has been shown to bind both L- and D-peptides and is assumed to interact only with the side chains of the substrate. This domain consists of the C-terminal region of the DnaJ protein. The function of this domain is unknown. It is found associated with IPR001623 from INTERPRO and IPR001305 from INTERPRO. ; GO: 0051082 unfolded protein binding, 0006457 protein folding; PDB: 2Q2G_A 2QLD_A 3AGX_A 3AGZ_A 3AGY_A 3I38_J 3LZ8_B 2B26_B 1C3G_A 1XAO_B ....

>KOG0713 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=99.76  E-value=9e-20  Score=174.36  Aligned_cols=250  Identities=25%  Similarity=0.372  Sum_probs=182.2

Q ss_pred             CcccccccccCCCCCCCCCCCCCChhhhhhhhhCCCCCCCCCCCCCCCCCCCCCCCCCCCcEEEEEEeehhhhhcCCeEE
Q 017925            1 MYDQYGEAGVKSTVGGGSSAYTTNPFDLFETFFGPSMGGFPGMNQTGFRTRRRSTVTKGEDLRYDIVLEFSESIFGAEKE   80 (363)
Q Consensus         1 ~YD~~G~~g~~~g~gg~~~g~~~~~~diF~~fFG~~~gg~~~~~~~g~~~~~~~~~~~g~di~~~l~ltlee~~~G~~~~   80 (363)
                      +||+||++++......+.++.+ + .++|+.||+..+..+++       ........+|.++...++.+++++|.+...+
T Consensus        77 ~YD~~GEegL~~~~~~~~~g~~-~-~~~f~~~f~dfg~~~~g-------~~~~e~~~~g~~V~~~~e~~~~h~y~~~~~e  147 (336)
T KOG0713|consen   77 HYDTYGEEGLKDENKDGEGGGG-G-NDIFSAFFGDFGVTVGG-------NPLEEALPKGSDVSSDLEKQLEHFYMGNFVE  147 (336)
T ss_pred             HHHhhhHhhhcccccccccCCc-c-cchHHHhhcccccccCC-------CcccCCCCCCceEEeehhhchhhhhcccHHH
Confidence            5999999999743100101110 1 48888888753111111       1112235689999999999999999998755


Q ss_pred             EEEeeeEeccCCCCCceeeCceeeeCCCCccccEEEEeeeCCCcceeeeecCCCCCcccEEeceeeeecCCCcEEeeceE
Q 017925           81 FELSHLETCEVCTGTGAKMGSKMRICSTCGGRGQVMRTDQTPFGLFSQVSVCPSCGGEGEVISEYCRKCSGEGRIRLKKN  160 (363)
Q Consensus        81 i~~~~~~~C~~C~GsG~~~g~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~vi~~~C~~C~G~G~v~~~~~  160 (363)
                      ....+.+.|. |.|+      .     .|+-. ..+..++...|.+++.+            ...|..|...+.+...++
T Consensus       148 ~~r~~~v~~~-~~g~------~-----~~~~~-~~~~~~~~~~g~~~~~q------------~~~~~~~~~~k~~~e~~~  202 (336)
T KOG0713|consen  148 EVREKGVYKP-APGT------R-----KCNCR-LEMFTQQEGPGRFQMLQ------------EAVCDECPNVKLVLEEDP  202 (336)
T ss_pred             HHhccCceee-cCcc------c-----ccCCh-hhheeeccCCChhhhhh------------hhhhccCCccceeecCCc
Confidence            5444444332 1111      1     11111 12333444444444322            234555556777888999


Q ss_pred             EEEEeCCCCCCCcEEEEccCcCCCCCCCCCccEEEEEEEEeccccccCCcceeEEEEeceEEeecCcEEEEeccCce-EE
Q 017925          161 IKVKVPPGVSTGSILRVVGEGDAGPRGGPPGDLYVYLDVEEIPGIQRDGIDLFSTISISYLDAIMGTVVKVKTVEGI-SE  239 (363)
Q Consensus       161 l~V~IP~Gv~~G~~irl~G~G~~~~~g~~~GDL~V~i~v~~h~~f~R~G~DL~~~~~I~l~eAllG~~~~v~tldG~-~~  239 (363)
                      +++.+..+...+....+..+|.+.. -+.+||+++.+...+|+.|.|+++||++.+.|++.+|+.|+..++.++|+. +.
T Consensus       203 ~~~~~~~~~~~~~~~~~~~~~~~h~-~~~~gD~~f~~~~y~~~~~~~k~~~~~~n~~~sl~~~~v~~~~e~~~~d~~~~~  281 (336)
T KOG0713|consen  203 LEVEFERGDADGPEEIFELEGEPHI-DGVPGDLFFKIVSYTHPRFERKGDDLYTNVTISLEAALVGFEMEILHLDGHYVE  281 (336)
T ss_pred             eeeeeeecccCCceeeeeccCCcce-ecccCCceeeeEEecccceecCccchhhHHHHHHHHHHHHHHHHhhccchhhhh
Confidence            9999999999999999999998754 578999999999999999999999999999999999999999999999997 46


Q ss_pred             EecCCCCCCCcEEEEccCCCCCCCCCCCCccEEEEEEEEcCCC-CCH
Q 017925          240 LQVPPGTQPGDVLVLAKKGAPKLNKPSIRGDHLFTVKVTIPNR-ISA  285 (363)
Q Consensus       240 l~ip~gtq~g~~~~l~g~G~P~~~~~~~rGDL~V~~~V~~P~~-l~~  285 (363)
                      ++....+-|+..++.+++|||.+++....|.+|++|.+.+|.+ ++.
T Consensus       282 ~~r~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~t~~~~~~~~~~~~  328 (336)
T KOG0713|consen  282 VSRKKITWPGARTRKKGEGMPLLKNRNEKGNLYVTFDVEFPKSSLSD  328 (336)
T ss_pred             hhhhhccccchhhhhhhccchhhhccchhcceeEEecccCcccccch
Confidence            6767789999999999999998776667899999999999964 555

>PF00684 DnaJ_CXXCXGXG: DnaJ central domain; InterPro: IPR001305 The hsp70 chaperone machine performs many diverse roles in the cell, including folding of nascent proteins, translocation of polypeptides across organelle membranes, coordinating responses to stress, and targeting selected proteins for degradation

Probab=99.63  E-value=5.3e-16  Score=117.21  Aligned_cols=65  Identities=49%  Similarity=1.107  Sum_probs=55.5

Q ss_pred             ccCCCCCceeeCceeeeCCCCccccEEEEeeeCCCcceeeeecCCCCCcccEEe-ceeeeecCCCc
Q 017925           89 CEVCTGTGAKMGSKMRICSTCGGRGQVMRTDQTPFGLFSQVSVCPSCGGEGEVI-SEYCRKCSGEG  153 (363)
Q Consensus        89 C~~C~GsG~~~g~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~vi-~~~C~~C~G~G  153 (363)
                      |+.|+|+|++++..+.+|+.|+|+|++++.+++++++++++++|+.|+|+|++| .++|+.|+|+|
T Consensus         1 C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~~~~~~~~~C~~C~G~G~~i~~~~C~~C~G~g   66 (66)
T PF00684_consen    1 CPKCNGTGAKPGKKPKTCPQCNGSGQVTRRQQTPGGVFQMQQTCPKCGGTGKIIEKDPCKTCKGSG   66 (66)
T ss_dssp             -CCCTTTSB-STTT-EE-TTSSSSSEEEEEEESSSTTEEEEEE-TTTSSSSEE-TSSB-SSSTTSS
T ss_pred             CCcCCCcccCCCCCCcCCcCCCCeeEEEEEEeCCCeEEEEEEECCCCcceeeEECCCCCCCCCCcC
Confidence            899999999999999999999999999999999999999999999999999999 99999999976

DnaJ is a member of the hsp40 family of molecular chaperones, which is also called the J-protein family, the members of which regulate the activity of hsp70s. DnaJ (hsp40) binds to DnaK (hsp70) and stimulates its ATPase activity, generating the ADP-bound state of DnaK, which interacts stably with the polypeptide substrate []. Besides stimulating the ATPase activity of DnaK through its J-domain, DnaJ also associates with unfolded polypeptide chains and prevents their aggregation []. DnaJ consists of an N-terminal conserved domain (called 'J' domain) of about 70 amino acid residues, a glycine and phenylalanine-rich domain ('G/F' domain), a central cysteine rich domain (CR-type zinc finger) containing four repeats of a CXXCXGXG motif which can coordinate two zinc atom and a C-terminal domain (CTD) []. This entry represents the central cysteine-rich (CR) domain of DnaJ proteins. This central cysteine rich domain (CR-type zinc finger) has an overall V-shaped extended beta-hairpin topology and contains four repeats of the motif CXXCXGXG where X is any amino acid. The isolated cysteine rich domain folds in zinc dependent fashion. Each set of two repeats binds one unit of zinc. Although this domain has been implicated in substrate binding, no evidence of specific interaction between the isolated DnaJ cysteine rich domain and various hydrophobic peptides has been found [].; GO: 0031072 heat shock protein binding, 0051082 unfolded protein binding; PDB: 1NLT_A 2CTT_A 1EXK_A.

>PRK10767 chaperone protein DnaJ; Provisional

Probab=99.56  E-value=1.2e-14  Score=144.83  Aligned_cols=133  Identities=31%  Similarity=0.633  Sum_probs=97.0

Q ss_pred             hhhcCCeEEEEEeeeEeccCCCCCceeeC-----ceeeeCCCCccccEEEEeeeCCCcceeeeecCCCCCcccEEeceee
Q 017925           72 ESIFGAEKEFELSHLETCEVCTGTGAKMG-----SKMRICSTCGGRGQVMRTDQTPFGLFSQVSVCPSCGGEGEVISEYC  146 (363)
Q Consensus        72 e~~~G~~~~i~~~~~~~C~~C~GsG~~~g-----~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~vi~~~C  146 (363)
                      ..+.|....- -.....|..|+|+|....     ....+|+.|+|+|.++.            .+|+.|+|.|.+.....
T Consensus       146 ~~C~G~G~~~-~~~~~~C~~C~G~G~~~~~~g~~~~~~~C~~C~G~G~~~~------------~~C~~C~G~g~v~~~~~  212 (371)
T PRK10767        146 DTCHGSGAKP-GTSPKTCPTCHGAGQVRMQQGFFTVQQTCPTCHGRGKIIK------------DPCKKCHGQGRVEKEKT  212 (371)
T ss_pred             CCCCCcccCC-CCCCccCCCCCCeeEEEEeeceEEEEEeCCCCCCceeECC------------CCCCCCCCCceEeeeee
Confidence            3455544321 123468999999997531     24568999999998754            78999999998754321


Q ss_pred             --------------eecCCCcE------------Ee-------------------------------------eceEEEE
Q 017925          147 --------------RKCSGEGR------------IR-------------------------------------LKKNIKV  163 (363)
Q Consensus       147 --------------~~C~G~G~------------v~-------------------------------------~~~~l~V  163 (363)
                                    ....|.|.            +.                                     ....++|
T Consensus       213 l~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~~ldG~i~v  292 (371)
T PRK10767        213 LSVKIPAGVDTGDRIRLSGEGEAGERGGPAGDLYVQIHVKEHPIFERDGNDLYCEVPISFTTAALGGEIEVPTLDGRVKL  292 (371)
T ss_pred             EEEecCCCCCCCcEEEEecCccCCCCCCCCcCEEEEEEEeeCCCEEEecCCEEEEEEeCHHHHhCCCeEEEecCCCcEEE
Confidence                          12222220            00                                     0135899


Q ss_pred             EeCCCCCCCcEEEEccCcCCCCCCCCCccEEEEEEEEeccccccCCcceeEEEE
Q 017925          164 KVPPGVSTGSILRVVGEGDAGPRGGPPGDLYVYLDVEEIPGIQRDGIDLFSTIS  217 (363)
Q Consensus       164 ~IP~Gv~~G~~irl~G~G~~~~~g~~~GDL~V~i~v~~h~~f~R~G~DL~~~~~  217 (363)
                      +||+|+++|++++|+|+|++.+.+..+|||||+|+|..|+.|++++.+|+..+.
T Consensus       293 ~ip~g~~~g~~~~i~g~G~p~~~~~~~GDL~v~~~v~~P~~l~~~~~~ll~~l~  346 (371)
T PRK10767        293 KIPEGTQTGKLFRLRGKGVKSVRSGARGDLYCQVVVETPVNLTKRQKELLEEFE  346 (371)
T ss_pred             EeCCCCCCCCEEEECCCCcCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHH
Confidence            999999999999999999987655678999999999999999999998877653

>COG0484 DnaJ DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones]

Probab=99.54  E-value=9.1e-15  Score=143.35  Aligned_cols=133  Identities=32%  Similarity=0.628  Sum_probs=98.7

Q ss_pred             hhhhhcCCeEEEEEeeeEeccCCCCCceeeC-------ceeeeCCCCccccEEEEeeeCCCcceeeeecCCCCCcccEEe
Q 017925           70 FSESIFGAEKEFELSHLETCEVCTGTGAKMG-------SKMRICSTCGGRGQVMRTDQTPFGLFSQVSVCPSCGGEGEVI  142 (363)
Q Consensus        70 lee~~~G~~~~i~~~~~~~C~~C~GsG~~~g-------~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~vi  142 (363)
                      ..+.+.|.-.+- -....+|++|+|+|....       ...++|++|+|+|.++.            .+|++|+|.|.+.
T Consensus       144 ~C~~C~GsGak~-gt~~~tC~tC~G~G~v~~~~~~g~~~~~~~C~~C~G~G~~i~------------~pC~~C~G~G~v~  210 (371)
T COG0484         144 TCSTCHGSGAKP-GTDPKTCPTCNGSGQVRTVQRTGFFSFQQTCPTCNGTGKIIK------------DPCGKCKGKGRVK  210 (371)
T ss_pred             ECCcCCCCCCCC-CCCCCcCCCCCCcCeEEEEEeeeEEEEEEECCCCccceeECC------------CCCCCCCCCCeEe
Confidence            456677763221 236789999999997543       24789999999999874            8999999999976


Q ss_pred             ceee--------------eecCCCcE----------------------------------------------Ee---ece
Q 017925          143 SEYC--------------RKCSGEGR----------------------------------------------IR---LKK  159 (363)
Q Consensus       143 ~~~C--------------~~C~G~G~----------------------------------------------v~---~~~  159 (363)
                      +..-              ....|+|.                                              +.   ...
T Consensus       211 ~~~~i~V~IPaGv~~g~~ir~~g~G~~g~~Ggp~GDLyv~i~v~~h~~F~R~g~dL~~~~~Is~~~AalG~~i~vptl~g  290 (371)
T COG0484         211 KKKSISVNIPAGVDDGDRIRLSGEGEAGPNGGPAGDLYVFVHVKPHPIFERDGDDLYCEVPISFTEAALGGEIEVPTLDG  290 (371)
T ss_pred             eeeEEEEECCCCCccCCEEEEecCcccCCCCCCCccEEEEEEeecCCCeEECCCceEeccccCHHHHhcCCEEEEEecCC
Confidence            5332              12233320                                              00   113


Q ss_pred             EEEEEeCCCCCCCcEEEEccCcCCCCCCCCCccEEEEEEEEeccccccCCcceeEE
Q 017925          160 NIKVKVPPGVSTGSILRVVGEGDAGPRGGPPGDLYVYLDVEEIPGIQRDGIDLFST  215 (363)
Q Consensus       160 ~l~V~IP~Gv~~G~~irl~G~G~~~~~g~~~GDL~V~i~v~~h~~f~R~G~DL~~~  215 (363)
                      .++|+||||+++|++++|+|+|++..++...|||||+|+|.-+..+......|+-+
T Consensus       291 ~~~l~ip~Gtq~G~~~rl~gkG~p~~~~~~~GDl~v~v~v~~P~~ls~~q~~lL~~  346 (371)
T COG0484         291 RVKLKIPAGTQTGEVFRLRGKGMPKLRSGGRGDLYVRVKVETPKNLSDEQKELLEE  346 (371)
T ss_pred             CEEEecCCCCccCcEEEEcCCCccccCCCCcCCEEEEEEEEcCCCCCHHHHHHHHH
Confidence            48999999999999999999999988887789999999999998877665555433

>PRK14288 chaperone protein DnaJ; Provisional

Probab=99.52  E-value=6.1e-14  Score=139.53  Aligned_cols=142  Identities=22%  Similarity=0.428  Sum_probs=98.9

Q ss_pred             CCCcEEEEEEee-hhhhhcCCeEEEEEeeeEeccCCCCCceeeC-----ceeeeCCCCccccEEEEeeeCCCcceeeeec
Q 017925           58 KGEDLRYDIVLE-FSESIFGAEKEFELSHLETCEVCTGTGAKMG-----SKMRICSTCGGRGQVMRTDQTPFGLFSQVSV  131 (363)
Q Consensus        58 ~g~di~~~l~lt-lee~~~G~~~~i~~~~~~~C~~C~GsG~~~g-----~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~  131 (363)
                      .|....+.+... +.+.+.|....-  .....|..|+|+|....     ....+|+.|+|+|.++.            .+
T Consensus       129 ~G~~~~i~~~r~~~C~~C~G~G~~~--~~~~~C~~C~G~G~~~~~~g~~~~~~~C~~C~G~G~~~~------------~~  194 (369)
T PRK14288        129 FGCKKTIKVQYQSVCESCDGTGAKD--KALETCKQCNGQGQVFMRQGFMSFAQTCGACQGKGKIIK------------TP  194 (369)
T ss_pred             CCeEEEEEEEeeccCCCCCCcccCC--CCCcCCCCCCCCcEEEEEeceEEEEEecCCCCCCceEcc------------cc
Confidence            455444444322 455566654432  24578999999997532     24568999999999764            78


Q ss_pred             CCCCCcccEEeceee--------------eecCCCcE-------------------------------------------
Q 017925          132 CPSCGGEGEVISEYC--------------RKCSGEGR-------------------------------------------  154 (363)
Q Consensus       132 C~~C~G~G~vi~~~C--------------~~C~G~G~-------------------------------------------  154 (363)
                      |+.|+|.|.+....-              ..-.|+|.                                           
T Consensus       195 C~~C~G~g~v~~~~~l~V~IP~G~~~G~~i~l~g~G~~~~~~~~GDL~v~i~v~~h~~f~R~G~DL~~~~~Isl~eAllG  274 (369)
T PRK14288        195 CQACKGKTYILKDEEIDAIIPEGIDDQNRMVLKNKGNEYEKGKRGDLYLEARVKEDEHFKREGCDLFIEAPVFFTTIALG  274 (369)
T ss_pred             CccCCCcceEEEEEEEEEecCCCCCCCCEEEEccCccCCCCCCCCCEEEEEEEEECCCcEEeCCEEEEEEecCHHHHhcC
Confidence            999999998764321              11222220                                           


Q ss_pred             ----Ee--eceEEEEEeCCCCCCCcEEEEccCcCCCCCCCCCccEEEEEEEEeccccccCCccee
Q 017925          155 ----IR--LKKNIKVKVPPGVSTGSILRVVGEGDAGPRGGPPGDLYVYLDVEEIPGIQRDGIDLF  213 (363)
Q Consensus       155 ----v~--~~~~l~V~IP~Gv~~G~~irl~G~G~~~~~g~~~GDL~V~i~v~~h~~f~R~G~DL~  213 (363)
                          +.  ..+.++|+||+++++|++++|+|+|++.+.+...|||||+|+|+.|+.|+.+...|+
T Consensus       275 ~~i~v~tLdG~~l~i~i~~~~~~g~~~~i~g~G~p~~~~~~~GDL~v~~~v~~P~~ls~~q~~~l  339 (369)
T PRK14288        275 HTIKVPSLKGDELELKIPRNARDRQTFAFRNEGVKHPESSYRGSLIVELQVIYPKSLNKEQQELL  339 (369)
T ss_pred             CEEEeecCCCCEEEEEeCCCCCCCcEEEEcCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHH
Confidence                00  015689999999999999999999998765445699999999999988776654443

>PRK14282 chaperone protein DnaJ; Provisional

Probab=99.51  E-value=3.4e-14  Score=141.37  Aligned_cols=146  Identities=28%  Similarity=0.505  Sum_probs=102.8

Q ss_pred             CCCcEEEEEEe-ehhhhhcCCeEEEEEeeeEeccCCCCCceeeC---------ceeeeCCCCccccEEEEeeeCCCccee
Q 017925           58 KGEDLRYDIVL-EFSESIFGAEKEFELSHLETCEVCTGTGAKMG---------SKMRICSTCGGRGQVMRTDQTPFGLFS  127 (363)
Q Consensus        58 ~g~di~~~l~l-tlee~~~G~~~~i~~~~~~~C~~C~GsG~~~g---------~~~~~C~~C~G~G~~~~~~~~~~G~~~  127 (363)
                      .|....+.+.. .+...+.|....- -.....|+.|+|+|....         ....+|+.|+|+|+++.          
T Consensus       141 ~G~~~~i~~~r~~~C~~C~G~G~~~-~~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~~~~----------  209 (369)
T PRK14282        141 NGAEIPVEYDRYETCPHCGGTGVEP-GSGYVTCPKCHGTGRIREERRSFFGVFVSERTCERCGGTGKIPG----------  209 (369)
T ss_pred             CCeEEEEEeeecccCCCCCccCCCC-CCCCcCCCCCCCcCEEEEEEEccCcceEEEEECCCCCCcceeCC----------
Confidence            45444333322 2344566654321 123468999999997642         24578999999998754          


Q ss_pred             eeecCCCCCcccEEecee--------------eeecCCCcE---------------------------------------
Q 017925          128 QVSVCPSCGGEGEVISEY--------------CRKCSGEGR---------------------------------------  154 (363)
Q Consensus       128 ~~~~C~~C~G~G~vi~~~--------------C~~C~G~G~---------------------------------------  154 (363)
                        ..|+.|+|.|.+....              ...-.|+|.                                       
T Consensus       210 --~~C~~C~G~g~v~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDl~i~i~v~~h~~F~r~G~DL~~~~~Isl~  287 (369)
T PRK14282        210 --EYCHECGGSGRIRRRVRTTVKIPAGVEDGTVLRITGGGNAGYYGGPYGDLYVIVRVRPDPRFKRSGSDLIYDVTIDYL  287 (369)
T ss_pred             --CCCCCCCCceeEEEEEEEEEEeCCCCCCCCEEEEecccCCCCCCCCCCCEEEEEEEecCCcEEEecCCEEEEEEeCHH
Confidence              7899999999765421              112222220                                       


Q ss_pred             ---------Ee--eceEEEEEeCCCCCCCcEEEEccCcCCCCCCCCCccEEEEEEEEeccccccCCcceeEEE
Q 017925          155 ---------IR--LKKNIKVKVPPGVSTGSILRVVGEGDAGPRGGPPGDLYVYLDVEEIPGIQRDGIDLFSTI  216 (363)
Q Consensus       155 ---------v~--~~~~l~V~IP~Gv~~G~~irl~G~G~~~~~g~~~GDL~V~i~v~~h~~f~R~G~DL~~~~  216 (363)
                               +.  ..++|+|+||+|+++|++|+|+|+|++.+....+|||||+|+|+.|+.|++++.+|+..+
T Consensus       288 eAl~G~~~~i~~ldG~~i~v~Ip~g~~~g~~iri~GkG~p~~~~~~~GDL~V~~~v~~P~~l~~~~~~ll~~l  360 (369)
T PRK14282        288 QAILGTTVEVPLPEGGTTMLKIPPGTQPETVFRLKGKGLPNMRYGRRGDLIVNVHVEIPKRLSREERKLLKEL  360 (369)
T ss_pred             HHhCCCEEEEeCCCCcEEEEEeCCCcCCCCEEEECCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHH
Confidence                     11  015799999999999999999999998654556899999999999999999999887653

>PRK14290 chaperone protein DnaJ; Provisional

Probab=99.49  E-value=8.6e-14  Score=138.35  Aligned_cols=131  Identities=30%  Similarity=0.628  Sum_probs=98.2

Q ss_pred             hhhcCCeEEEEEeeeEeccCCCCCceeeCc---------eeeeCCCCccccEEEEeeeCCCcceeeeecCCCCCcccEEe
Q 017925           72 ESIFGAEKEFELSHLETCEVCTGTGAKMGS---------KMRICSTCGGRGQVMRTDQTPFGLFSQVSVCPSCGGEGEVI  142 (363)
Q Consensus        72 e~~~G~~~~i~~~~~~~C~~C~GsG~~~g~---------~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~vi  142 (363)
                      ..+.|....-  .....|+.|+|+|.....         ...+|+.|+|+|+++.            .+|+.|+|.|.+.
T Consensus       153 ~~C~G~g~~~--~~~~~C~~C~G~G~~~~~~~~g~~~~~~~~~C~~C~G~G~~~~------------~~C~~C~G~g~v~  218 (365)
T PRK14290        153 PDCSGTGAKN--GKLITCPTCHGTGQQRIVRGQGFFRMVTVTTCRTCGGRGRIPE------------EKCPRCNGTGTVV  218 (365)
T ss_pred             CCCccccCCC--CCCccCCCCCCcCEEEEEeccCeEEEEEEEeCCCCCCceeEcc------------CCCCCCCCceeEE
Confidence            3455544322  245789999999975321         2478999999998754            7899999999976


Q ss_pred             cee--------------eeecCCCcE----------------------------------------------Ee-eceEE
Q 017925          143 SEY--------------CRKCSGEGR----------------------------------------------IR-LKKNI  161 (363)
Q Consensus       143 ~~~--------------C~~C~G~G~----------------------------------------------v~-~~~~l  161 (363)
                      ...              ...-.|+|.                                              +. ...++
T Consensus       219 ~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~~~GDL~v~v~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~I~~~~g~i  298 (365)
T PRK14290        219 VNEDISVKIPKGATDNLRLRVKGKGQSYGGRTGDLYVVLRVNNDPNIQRINDDLYVDQKINFPQAALGGEIEIKLFREKY  298 (365)
T ss_pred             EeeEEEEEECCCCCCCcEEEEccccCCCCCCCCCEEEEEEEcCCCCEEEecCCEEEEEEeCHHHHhCCCEEEEEcCCceE
Confidence            432              122233221                                              11 11568


Q ss_pred             EEEeCCCCCCCcEEEEccCcCCCCCCCCCccEEEEEEEEeccccccCCcceeEEE
Q 017925          162 KVKVPPGVSTGSILRVVGEGDAGPRGGPPGDLYVYLDVEEIPGIQRDGIDLFSTI  216 (363)
Q Consensus       162 ~V~IP~Gv~~G~~irl~G~G~~~~~g~~~GDL~V~i~v~~h~~f~R~G~DL~~~~  216 (363)
                      +|+||+|+++|++|+|+|+|++.+.+..+|||||+|+|..|+.|++++.+|+.++
T Consensus       299 ~V~Ip~g~~~g~~iri~g~G~p~~~~~~~GDL~V~~~V~~P~~l~~~~~~ll~~~  353 (365)
T PRK14290        299 NLKIPEGTQPGEVLKIKGAGMPHLNGHGSGDLLVRINVEVPKRLTSKQKELIREF  353 (365)
T ss_pred             EEEECCccCCCcEEEECCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHH
Confidence            9999999999999999999998766667899999999999999999999887663

>PRK14298 chaperone protein DnaJ; Provisional

Probab=99.45  E-value=1.5e-13  Score=137.18  Aligned_cols=134  Identities=31%  Similarity=0.542  Sum_probs=97.4

Q ss_pred             hhhhhcCCeEEEEEeeeEeccCCCCCceeeC---------ceeeeCCCCccccEEEEeeeCCCcceeeeecCCCCCcccE
Q 017925           70 FSESIFGAEKEFELSHLETCEVCTGTGAKMG---------SKMRICSTCGGRGQVMRTDQTPFGLFSQVSVCPSCGGEGE  140 (363)
Q Consensus        70 lee~~~G~~~~i~~~~~~~C~~C~GsG~~~g---------~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~  140 (363)
                      +...+.|...+- -.....|+.|+|+|....         ....+|+.|+|+|.++.            .+|+.|.|.|.
T Consensus       143 ~C~~C~G~G~~~-~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~------------~~C~~C~G~g~  209 (377)
T PRK14298        143 RCSTCSGTGAKP-GTSPKRCPTCGGTGQVTTTRSTPLGQFVTTTTCSTCHGRGQVIE------------SPCPVCSGTGK  209 (377)
T ss_pred             cCCCCCCCcccC-CCCCCcCCCCCCccEEEEEEecCceeEEEEEeCCCCCCCCcccC------------CCCCCCCCccE
Confidence            344556654322 123467999999997542         24678999999998754            78999999998


Q ss_pred             Eeceee--------------eecCCCcE------------------------------------------------Ee-e
Q 017925          141 VISEYC--------------RKCSGEGR------------------------------------------------IR-L  157 (363)
Q Consensus       141 vi~~~C--------------~~C~G~G~------------------------------------------------v~-~  157 (363)
                      +....-              ..-.|+|.                                                +. .
T Consensus       210 v~~~~~l~V~IppG~~~G~~i~~~g~G~~~~~~~~~GDL~i~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~tl  289 (377)
T PRK14298        210 VRKTRKITVNVPAGADSGLRLKLSGEGEAGSPGAPSGDLYIVLHVKEHDYFERVGDDIISEIPISFTQAALGADIMVPTL  289 (377)
T ss_pred             EEEEEEEEecCCCCCCCCCEEEEecccCCCCCCCCCcCEEEEEEEecCCCeEEEcCcEEEEEEeCHHHHhCCCeEEEecC
Confidence            764321              11222210                                                00 0


Q ss_pred             ceEEEEEeCCCCCCCcEEEEccCcCCCCCCCCCccEEEEEEEEeccccccCCcceeEEE
Q 017925          158 KKNIKVKVPPGVSTGSILRVVGEGDAGPRGGPPGDLYVYLDVEEIPGIQRDGIDLFSTI  216 (363)
Q Consensus       158 ~~~l~V~IP~Gv~~G~~irl~G~G~~~~~g~~~GDL~V~i~v~~h~~f~R~G~DL~~~~  216 (363)
                      ...++|+||+|+++|++++|+|+|++...+...|||||+|+|..|+.|++++.+|+.++
T Consensus       290 dG~i~v~ip~g~~~g~~lri~g~G~p~~~~~~~GDL~V~~~V~~P~~ls~~~~~ll~~l  348 (377)
T PRK14298        290 YGKVKMNIPPGTQTHSVFRLKDKGMPRLHGHGKGDQLVKVIVKTPTKLTQEQKELLREF  348 (377)
T ss_pred             CCCEEEEeCCCcccCCEEEECCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHH
Confidence            13479999999999999999999998665556899999999999999999998887665

>PRK14294 chaperone protein DnaJ; Provisional

Probab=99.44  E-value=1.9e-13  Score=135.98  Aligned_cols=120  Identities=30%  Similarity=0.596  Sum_probs=92.6

Q ss_pred             eEeccCCCCCceeeC-----ceeeeCCCCccccEEEEeeeCCCcceeeeecCCCCCcccEEecee--------------e
Q 017925           86 LETCEVCTGTGAKMG-----SKMRICSTCGGRGQVMRTDQTPFGLFSQVSVCPSCGGEGEVISEY--------------C  146 (363)
Q Consensus        86 ~~~C~~C~GsG~~~g-----~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~vi~~~--------------C  146 (363)
                      ...|+.|+|+|....     ....+|+.|+|+|+++.            .+|+.|+|.|.+....              -
T Consensus       161 ~~~C~~C~G~G~~~~~~G~~~~~~~C~~C~G~G~~~~------------~~C~~C~G~g~v~~~~~l~V~Ip~G~~~G~~  228 (366)
T PRK14294        161 PTTCPQCGGSGQVTQSQGFFSIRTTCPRCRGMGKVIV------------SPCKTCHGQGRVRVSKTVQVKIPAGVDTGSR  228 (366)
T ss_pred             cccCCCcCCeEEEEEEeeeEEEEeeCCCCCCcCeecC------------cCCCCCCCceEeecceeEEEecCCCCcCCcE
Confidence            468999999997642     24678999999998754            7899999999876432              1


Q ss_pred             eecCCCcE------------------------------------------------Ee-eceEEEEEeCCCCCCCcEEEE
Q 017925          147 RKCSGEGR------------------------------------------------IR-LKKNIKVKVPPGVSTGSILRV  177 (363)
Q Consensus       147 ~~C~G~G~------------------------------------------------v~-~~~~l~V~IP~Gv~~G~~irl  177 (363)
                      ....|.|.                                                +. ....++|+||+|+++|++|+|
T Consensus       229 i~~~g~G~~~~~~~~~GDl~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~tldG~~~v~ip~g~~~g~~iri  308 (366)
T PRK14294        229 LRLRGEGEAGVRGGPPGDLYVFLTVEPHEFFERDGNDVHCKVPISFVQAALGAQIEVPTLEGERELKIPKGTQPGDIFRF  308 (366)
T ss_pred             EEEccCccCCCCCCCCCcEEEEEEEccCCcceecCCCEEEEEEeCHHHHhCCCeEEEECCCCcEEEEECCCcCCCCEEEE
Confidence            22233220                                                00 013468999999999999999


Q ss_pred             ccCcCCCCCCCCCccEEEEEEEEeccccccCCcceeEEEE
Q 017925          178 VGEGDAGPRGGPPGDLYVYLDVEEIPGIQRDGIDLFSTIS  217 (363)
Q Consensus       178 ~G~G~~~~~g~~~GDL~V~i~v~~h~~f~R~G~DL~~~~~  217 (363)
                      +|+|++.+.+..+|||||+|+|..|+.|+++..+|+..+.
T Consensus       309 ~G~G~p~~~~~~~GDL~V~~~v~~P~~l~~~q~~ll~~~~  348 (366)
T PRK14294        309 KGKGIPSLRGGGRGDQIIEVEVKVPTRLTKKQEELLTEFA  348 (366)
T ss_pred             CCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHH
Confidence            9999987655578999999999999999999888876643

>PRK14285 chaperone protein DnaJ; Provisional

Probab=99.43  E-value=2.4e-13  Score=135.13  Aligned_cols=133  Identities=26%  Similarity=0.533  Sum_probs=96.6

Q ss_pred             hhhhhcCCeEEEEEeeeEeccCCCCCceeeC-----ceeeeCCCCccccEEEEeeeCCCcceeeeecCCCCCcccEEece
Q 017925           70 FSESIFGAEKEFELSHLETCEVCTGTGAKMG-----SKMRICSTCGGRGQVMRTDQTPFGLFSQVSVCPSCGGEGEVISE  144 (363)
Q Consensus        70 lee~~~G~~~~i~~~~~~~C~~C~GsG~~~g-----~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~vi~~  144 (363)
                      +.+.+.|.-.. .-.....|..|+|+|....     ....+|+.|+|+|.++.            .+|+.|+|.|.+...
T Consensus       148 ~C~~C~G~G~~-~~~~~~~C~~C~G~G~~~~~~G~~~~~~~C~~C~G~G~~~~------------~~C~~C~G~g~v~~~  214 (365)
T PRK14285        148 LCESCLGKKSE-KGTSPSICNMCNGSGRVMQGGGFFRVTTTCPKCYGNGKIIS------------NPCKSCKGKGSLKKK  214 (365)
T ss_pred             cCCCCCCcccC-CCCCCccCCCccCceeEEecCceeEEeeecCCCCCcccccC------------CCCCCCCCCCEEecc
Confidence            34456665432 1223467999999997532     35678999999998764            789999999987543


Q ss_pred             ee--------------eecCCCcE------------------------------------------------Ee--eceE
Q 017925          145 YC--------------RKCSGEGR------------------------------------------------IR--LKKN  160 (363)
Q Consensus       145 ~C--------------~~C~G~G~------------------------------------------------v~--~~~~  160 (363)
                      .-              ..-.|+|.                                                +.  ..+.
T Consensus       215 ~~~~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDL~v~i~v~~h~~f~R~G~dL~~~~~Isl~eAl~G~~~~i~tldG~~  294 (365)
T PRK14285        215 ETIELKIPAGIDDNQQIKMRGKGSVNPDNQQYGDLYIKILIKPHKIFKRNGKDLYATLPISFTQAALGKEIKIQTIASKK  294 (365)
T ss_pred             EEEEEEECCCCCCCCEEEEeeccccCCCCCCCCCEEEEEEEecCCCeEEeccceEEEEecCHHHHhCCCEEEEECCCCCE
Confidence            21              11222210                                                00  0157


Q ss_pred             EEEEeCCCCCCCcEEEEccCcCCCCCCCCCccEEEEEEEEeccccccCCcceeEE
Q 017925          161 IKVKVPPGVSTGSILRVVGEGDAGPRGGPPGDLYVYLDVEEIPGIQRDGIDLFST  215 (363)
Q Consensus       161 l~V~IP~Gv~~G~~irl~G~G~~~~~g~~~GDL~V~i~v~~h~~f~R~G~DL~~~  215 (363)
                      |+|+||+|+++|++|+|+|+|++.+.+...|||||+|+|+.|+.|++++..|+..
T Consensus       295 v~V~Ip~g~~~g~~irl~GkG~p~~~~~~~GDL~V~~~v~~P~~l~~~q~~~l~~  349 (365)
T PRK14285        295 IKIKIPKGTENDEQIIIKNEGMPILHTEKFGNLILIIKIKTPKNLNSNAIKLLEN  349 (365)
T ss_pred             EEEEeCCCcCCCcEEEECCCCccCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHH
Confidence            9999999999999999999999876555579999999999999999888766544

>PRK14300 chaperone protein DnaJ; Provisional

Probab=99.41  E-value=4.9e-13  Score=133.22  Aligned_cols=129  Identities=25%  Similarity=0.539  Sum_probs=92.4

Q ss_pred             hhhcCCeEEEEEeeeEeccCCCCCceeeC-----ceeeeCCCCccccEEEEeeeCCCcceeeeecCCCCCcccEEeceee
Q 017925           72 ESIFGAEKEFELSHLETCEVCTGTGAKMG-----SKMRICSTCGGRGQVMRTDQTPFGLFSQVSVCPSCGGEGEVISEYC  146 (363)
Q Consensus        72 e~~~G~~~~i~~~~~~~C~~C~GsG~~~g-----~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~vi~~~C  146 (363)
                      ..+.|....- -.....|+.|+|+|....     ....+|+.|+|+|.++.            .+|+.|+|.|.+....-
T Consensus       149 ~~C~G~g~~~-~~~~~~C~~C~G~G~~~~~~g~~~~~~~C~~C~G~G~~~~------------~~C~~C~G~g~v~~~~~  215 (372)
T PRK14300        149 DTCHGSGSEK-GETVTTCDACSGVGATRMQQGFFTIEQACHKCQGNGQIIK------------NPCKKCHGMGRYHKQRN  215 (372)
T ss_pred             CCCCCcccCC-CCCCccCCCccCeEEEEEeeceEEEEEeCCCCCccceEeC------------CCCCCCCCceEEEeeEE
Confidence            3455544321 223468999999998642     24668999999999865            78999999999754321


Q ss_pred             --------------eecCCCc------------------------------------------------EEee--ceEEE
Q 017925          147 --------------RKCSGEG------------------------------------------------RIRL--KKNIK  162 (363)
Q Consensus       147 --------------~~C~G~G------------------------------------------------~v~~--~~~l~  162 (363)
                                    ..-.|.|                                                .+..  .+.|+
T Consensus       216 ~~V~Ip~G~~~G~~i~l~g~G~~~~~~~~~GDL~v~i~v~~h~~f~R~G~Dl~~~~~Isl~~Al~G~~~~i~~ldg~~i~  295 (372)
T PRK14300        216 LSVNIPAGVENGTRIRHTGEGEAGIRGGNSGDLYVDIAIKPHDIYKVDGANLHCKLPISFVNAALGGEIEVPVIEGGKVN  295 (372)
T ss_pred             EEEEECCCCCCCcEEEEeccccCCCCCCCCCCEEEEEEECCCCCeEEecCCEEEEEecCHHHHhCCCEEEEecCCCCEEE
Confidence                          1112211                                                1111  15899


Q ss_pred             EEeCCCCCCCcEEEEccCcCCCCCCCCCccEEEEEEEEeccccccCCccee
Q 017925          163 VKVPPGVSTGSILRVVGEGDAGPRGGPPGDLYVYLDVEEIPGIQRDGIDLF  213 (363)
Q Consensus       163 V~IP~Gv~~G~~irl~G~G~~~~~g~~~GDL~V~i~v~~h~~f~R~G~DL~  213 (363)
                      |+||+|+++|++|+|+|+|++.+.+..+|||||+|+|..|..|+-+...|+
T Consensus       296 v~Ip~g~~~g~~iri~g~G~p~~~~~~~GDL~V~~~v~~P~~ls~~qk~~l  346 (372)
T PRK14300        296 LTIPAGTQNGDQLRLRSKGMSKMRSTIRGDMLTHIHVEVPKNLSKRQRELL  346 (372)
T ss_pred             EEECCccCCCcEEEECCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHH
Confidence            999999999999999999998765567899999999999987765554443

>PRK14284 chaperone protein DnaJ; Provisional

Probab=99.40  E-value=6.7e-13  Score=133.08  Aligned_cols=146  Identities=26%  Similarity=0.546  Sum_probs=100.7

Q ss_pred             CCCcEEEEEEe-ehhhhhcCCeEEEEEeeeEeccCCCCCceeeC-----ceeeeCCCCccccEEEEeeeCCCcceeeeec
Q 017925           58 KGEDLRYDIVL-EFSESIFGAEKEFELSHLETCEVCTGTGAKMG-----SKMRICSTCGGRGQVMRTDQTPFGLFSQVSV  131 (363)
Q Consensus        58 ~g~di~~~l~l-tlee~~~G~~~~i~~~~~~~C~~C~GsG~~~g-----~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~  131 (363)
                      .|....+.+.- ...+.+.|.-.+.. .....|+.|+|+|....     ....+|+.|+|+|.++.            .+
T Consensus       147 ~G~~~~i~~~r~~~C~~C~G~G~~~~-~~~~~C~~C~G~G~v~~~~G~~~~~~~C~~C~G~G~~~~------------~~  213 (391)
T PRK14284        147 KGVEKELLVSGYKSCDACSGSGANSS-QGIKVCDRCKGSGQVVQSRGFFSMASTCPECGGEGRVIT------------DP  213 (391)
T ss_pred             CCeeEEEEEeeeccCCCCcccccCCC-CCCeecCccCCeeEEEEEeceEEEEEECCCCCCCCcccC------------Cc
Confidence            45444443322 23444555443222 23468999999997532     24579999999998754            78


Q ss_pred             CCCCCcccEEecee--------------eeecCCCc--------------------------------------------
Q 017925          132 CPSCGGEGEVISEY--------------CRKCSGEG--------------------------------------------  153 (363)
Q Consensus       132 C~~C~G~G~vi~~~--------------C~~C~G~G--------------------------------------------  153 (363)
                      |+.|.|.|.+....              -..-.|+|                                            
T Consensus       214 C~~C~G~g~v~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~  293 (391)
T PRK14284        214 CSVCRGQGRIKDKRSVHVHIPAGVDSGMRLKMEGYGDAGQNGAPAGDLYVFIDVEPHPVFERRGDDLILELPIGFVDAAL  293 (391)
T ss_pred             CCCCCCcceecceEEEEEEECCCCCCCCEEEEeccccCCCCCCCCCCEEEEEEEecCCCceeecCCEEEEEEecHHHHhC
Confidence            99999999875322              11222221                                            


Q ss_pred             ----EEee---ceEEEEEeCCCCCCCcEEEEccCcCCCCCCCCCccEEEEEEEEeccccccCCcceeEEE
Q 017925          154 ----RIRL---KKNIKVKVPPGVSTGSILRVVGEGDAGPRGGPPGDLYVYLDVEEIPGIQRDGIDLFSTI  216 (363)
Q Consensus       154 ----~v~~---~~~l~V~IP~Gv~~G~~irl~G~G~~~~~g~~~GDL~V~i~v~~h~~f~R~G~DL~~~~  216 (363)
                          .+..   .+.++|+||+|+++|++++|+|+|++.+.+..+|||||+|+|..|+.++.+..+|+..+
T Consensus       294 G~~~~v~tld~g~~i~v~Ip~g~~~g~~~~i~g~G~p~~~~~~~GDL~V~~~v~~P~~l~~~q~~ll~~l  363 (391)
T PRK14284        294 GMKKEIPTLLKEGTCRLTIPEGIQSGTILKVRGQGFPNVHGKGRGDLLVRISVETPQNLSEEQKELLRQF  363 (391)
T ss_pred             CCeEEEeecCCCcEEEEEECCccCCCeEEEECCCCCCCCCCCCCCcEEEEEEEECCCCCCHHHHHHHHHH
Confidence                1211   25789999999999999999999998765567899999999999988887776665443

>PRK14301 chaperone protein DnaJ; Provisional

Probab=99.39  E-value=6e-13  Score=132.65  Aligned_cols=132  Identities=26%  Similarity=0.493  Sum_probs=93.6

Q ss_pred             hhhhcCCeEEEEEeeeEeccCCCCCceeeC-----ceeeeCCCCccccEEEEeeeCCCcceeeeecCCCCCcccEEecee
Q 017925           71 SESIFGAEKEFELSHLETCEVCTGTGAKMG-----SKMRICSTCGGRGQVMRTDQTPFGLFSQVSVCPSCGGEGEVISEY  145 (363)
Q Consensus        71 ee~~~G~~~~i~~~~~~~C~~C~GsG~~~g-----~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~vi~~~  145 (363)
                      ...+.|....- -.....|+.|+|+|....     ....+|+.|+|+|+++.            .+|+.|+|.|.+....
T Consensus       147 C~~C~G~G~~~-~~~~~~C~~C~G~G~v~~~~G~~~~~~~C~~C~G~G~~~~------------~~C~~C~G~g~v~~~~  213 (373)
T PRK14301        147 CDDCGGSGAAP-GTSPETCRHCGGSGQVRQSQGFFQIAVPCPVCRGEGRVIT------------HPCPKCKGSGIVQQTR  213 (373)
T ss_pred             CCCCCCcccCC-CCCCcccCCccCeeEEEEEeeeEEEEEeCCCCCceeeecC------------CCCCCCCCCceeccce
Confidence            34455544321 233468999999997642     24678999999998764            7899999999875422


Q ss_pred             --------------eeecCCCcE------------------------------------------------Ee-eceEEE
Q 017925          146 --------------CRKCSGEGR------------------------------------------------IR-LKKNIK  162 (363)
Q Consensus       146 --------------C~~C~G~G~------------------------------------------------v~-~~~~l~  162 (363)
                                    -....|.|.                                                +. ....++
T Consensus       214 ~l~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDLiv~i~v~~h~~f~r~G~DL~~~~~Isl~eAl~G~~~~v~tldG~i~  293 (373)
T PRK14301        214 ELKVRIPAGVDTGSRLRLRGEGEPGVHGGPPGDLYVVITVEDDKIFQRQGQDLVVTQEISFVQAALGDRIEVPTLDDPVT  293 (373)
T ss_pred             EEEEEeCCCCcCCCEEEEeccccCCCCCCCCcCEEEEEEEEECCCceeecCcEEEEEEecHHHHhCCCeEEEecCCccEE
Confidence                          111222210                                                00 013489


Q ss_pred             EEeCCCCCCCcEEEEccCcCCCCCCCCCccEEEEEEEEeccccccCCcceeEE
Q 017925          163 VKVPPGVSTGSILRVVGEGDAGPRGGPPGDLYVYLDVEEIPGIQRDGIDLFST  215 (363)
Q Consensus       163 V~IP~Gv~~G~~irl~G~G~~~~~g~~~GDL~V~i~v~~h~~f~R~G~DL~~~  215 (363)
                      |+||+|+++|++++|+|+|++.+.+..+|||||+|+|..|+.++.+..+|+..
T Consensus       294 v~ip~g~~~g~~~ri~g~G~p~~~~~~~GDL~I~~~V~~P~~l~~~q~~~l~~  346 (373)
T PRK14301        294 LDIPKGTQSGEVFRLRGKGLPYLGSSQKGDLLVEVSVVTPTKLTKRQEELLRE  346 (373)
T ss_pred             EEECCCcCCCcEEEEcCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHH
Confidence            99999999999999999999876556689999999999998887666555544

>PRK14287 chaperone protein DnaJ; Provisional

Probab=99.38  E-value=7.4e-13  Score=131.90  Aligned_cols=134  Identities=28%  Similarity=0.569  Sum_probs=96.3

Q ss_pred             hhhhhcCCeEEEEEeeeEeccCCCCCceeeC---------ceeeeCCCCccccEEEEeeeCCCcceeeeecCCCCCcccE
Q 017925           70 FSESIFGAEKEFELSHLETCEVCTGTGAKMG---------SKMRICSTCGGRGQVMRTDQTPFGLFSQVSVCPSCGGEGE  140 (363)
Q Consensus        70 lee~~~G~~~~i~~~~~~~C~~C~GsG~~~g---------~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~  140 (363)
                      +.+.+.|.... .-.....|+.|+|+|....         ....+|+.|+|+|.++.            .+|..|+|.|.
T Consensus       140 ~C~~C~G~G~~-~~~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~~~~------------~~C~~C~G~g~  206 (371)
T PRK14287        140 TCGTCHGSGAK-PGTKPETCSHCGGSGQLNVEQNTPFGRVVNRRVCHHCEGTGKIIK------------QKCATCGGKGK  206 (371)
T ss_pred             cCCCCCCcccC-CCCCCcccCCCCCEEEEEEEEecCCceEEEEEeCCCCCCCCcccc------------ccCCCCCCeeE
Confidence            34556665432 1233568999999997642         23578999999999765            78999999997


Q ss_pred             Eeceee--------------eecCCCcE------------------------------------------------Ee-e
Q 017925          141 VISEYC--------------RKCSGEGR------------------------------------------------IR-L  157 (363)
Q Consensus       141 vi~~~C--------------~~C~G~G~------------------------------------------------v~-~  157 (363)
                      +....-              ..-.|+|.                                                +. .
T Consensus       207 v~~~~~l~V~Ip~G~~~G~~i~~~G~G~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~~l  286 (371)
T PRK14287        207 VRKRKKINVKVPAGIDHGQQLRVSGQGEAGVNGGPPGDLYVVFNVKPHEFFERDGDDIYCEMPLTFPQVALGDEIEVPTL  286 (371)
T ss_pred             EeeeEEEEEEECCcCCCCCEEEEccCCcCCCCCCCCccEEEEEEEecCCCEEEecCCeEEEEeccHHHHhCCCEEEEEcC
Confidence            754321              11222220                                                00 0


Q ss_pred             ceEEEEEeCCCCCCCcEEEEccCcCCCCCCCCCccEEEEEEEEeccccccCCcceeEEE
Q 017925          158 KKNIKVKVPPGVSTGSILRVVGEGDAGPRGGPPGDLYVYLDVEEIPGIQRDGIDLFSTI  216 (363)
Q Consensus       158 ~~~l~V~IP~Gv~~G~~irl~G~G~~~~~g~~~GDL~V~i~v~~h~~f~R~G~DL~~~~  216 (363)
                      ...++|+||+|+++|++++|+|+|++...+...|||||+|+|..|+.|+++...|+..+
T Consensus       287 dg~i~v~ip~g~~~g~~~ri~g~G~p~~~~~~~GDL~V~~~v~~P~~l~~~q~~ll~~l  345 (371)
T PRK14287        287 NGKVKLKIPAGTQTGTSFRLRGKGVPNVHGRGQGDQHVQVRVVTPKNLTEKEKELMREF  345 (371)
T ss_pred             CCCEEEEECCCccCCcEEEEcCCCccCCCCCCCCCEEEEEEEEcCCCCCHHHHHHHHHH
Confidence            13589999999999999999999998765556899999999999998887776655443

>PRK14278 chaperone protein DnaJ; Provisional

Probab=99.38  E-value=1e-12  Score=131.17  Aligned_cols=130  Identities=27%  Similarity=0.551  Sum_probs=91.7

Q ss_pred             hhhhcCCeEEEEEeeeEeccCCCCCceeeCc---------eeeeCCCCccccEEEEeeeCCCcceeeeecCCCCCcccEE
Q 017925           71 SESIFGAEKEFELSHLETCEVCTGTGAKMGS---------KMRICSTCGGRGQVMRTDQTPFGLFSQVSVCPSCGGEGEV  141 (363)
Q Consensus        71 ee~~~G~~~~i~~~~~~~C~~C~GsG~~~g~---------~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~v  141 (363)
                      .+.+.|.-..- -.....|+.|+|+|.....         ...+|+.|+|+|.++.            .+|+.|+|.|.+
T Consensus       142 C~~C~G~G~~~-~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~------------~~C~~C~G~g~v  208 (378)
T PRK14278        142 CDRCHGKGTAG-DSKPVTCDTCGGRGEVQTVQRSFLGQVMTSRPCPTCRGVGEVIP------------DPCHECAGDGRV  208 (378)
T ss_pred             CCCCcCccCCC-CCCceecCCccCceEEEEEEeccceeEEEEEECCCCCccceeeC------------CCCCCCCCceeE
Confidence            44456644321 2234689999999975321         3568999999999764            789999999987


Q ss_pred             ecee--------------eeecCCCc------------------------------------------------EEe-e-
Q 017925          142 ISEY--------------CRKCSGEG------------------------------------------------RIR-L-  157 (363)
Q Consensus       142 i~~~--------------C~~C~G~G------------------------------------------------~v~-~-  157 (363)
                      ....              -..-.|+|                                                .+. . 
T Consensus       209 ~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDL~v~i~~~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~tld  288 (378)
T PRK14278        209 RARREITVKIPAGVGDGMRIRLAAQGEVGPGGGPAGDLYVEVHEQPHDVFVRDGDDLHCTVSVPMVDAALGTTVTVEAIL  288 (378)
T ss_pred             ecceEEEEEECCCCCCCcEEEEccCcCCCCCCCCCCCEEEEEEECcCCCEEEcCCCEEEEEecCHHHHhcCCeEEEecCC
Confidence            5432              11112211                                                111 1 


Q ss_pred             ceEEEEEeCCCCCCCcEEEEccCcCCCCCCCCCccEEEEEEEEeccccccCCccee
Q 017925          158 KKNIKVKVPPGVSTGSILRVVGEGDAGPRGGPPGDLYVYLDVEEIPGIQRDGIDLF  213 (363)
Q Consensus       158 ~~~l~V~IP~Gv~~G~~irl~G~G~~~~~g~~~GDL~V~i~v~~h~~f~R~G~DL~  213 (363)
                      .+.++|+||+|+++|++++|+|+|++...+...|||||+|+|..+..++.+...|+
T Consensus       289 ~~~i~v~ip~g~~~g~~lrl~g~G~p~~~~~~~GDL~V~~~V~~P~~Ls~~qk~~l  344 (378)
T PRK14278        289 DGPSEITIPPGTQPGSVITLRGRGMPHLRSGGRGDLHAHVEVVVPTRLDHEDIELL  344 (378)
T ss_pred             CCeEEEEeCCCcCCCcEEEECCCCCCCCCCCCCCCEEEEEEEEcCCCCCHHHHHHH
Confidence            36789999999999999999999998765567899999999998876654444433

>PRK14286 chaperone protein DnaJ; Provisional

Probab=99.38  E-value=1.2e-12  Score=130.49  Aligned_cols=144  Identities=30%  Similarity=0.472  Sum_probs=97.9

Q ss_pred             CCCcEEEEEEe-ehhhhhcCCeEEEEEeeeEeccCCCCCceeeC-----ceeeeCCCCccccEEEEeeeCCCcceeeeec
Q 017925           58 KGEDLRYDIVL-EFSESIFGAEKEFELSHLETCEVCTGTGAKMG-----SKMRICSTCGGRGQVMRTDQTPFGLFSQVSV  131 (363)
Q Consensus        58 ~g~di~~~l~l-tlee~~~G~~~~i~~~~~~~C~~C~GsG~~~g-----~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~  131 (363)
                      .|....+.+.. .+.+.+.|.-..- -.....|+.|+|+|....     ....+|+.|+|+|.++.            .+
T Consensus       139 ~G~~k~i~~~r~~~C~~C~G~G~~~-~~~~~~C~~C~G~G~v~~~~G~~~~~~~C~~C~G~G~~~~------------~~  205 (372)
T PRK14286        139 LGREYKIEIPRLESCVDCNGSGASK-GSSPTTCPDCGGSGQIRRTQGFFSVATTCPTCRGKGTVIS------------NP  205 (372)
T ss_pred             CCeeEEEEeeccccCCCCcCCCcCC-CCCCccCCCCcCeEEEEEEeceEEEEEeCCCCCceeeEec------------cc
Confidence            45444333321 2334456644321 123468999999997632     25678999999998865            78


Q ss_pred             CCCCCcccEEecee--------------eeecCCCcE-------------------------------------------
Q 017925          132 CPSCGGEGEVISEY--------------CRKCSGEGR-------------------------------------------  154 (363)
Q Consensus       132 C~~C~G~G~vi~~~--------------C~~C~G~G~-------------------------------------------  154 (363)
                      |+.|+|.|.+....              -....|+|.                                           
T Consensus       206 C~~C~G~g~~~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDL~i~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~  285 (372)
T PRK14286        206 CKTCGGQGLQEKRRTINIKIPPGVETGSRLKVSGEGEAGPNGGPHGDLYVVTHIKKHELFERQGNDLILVRKISLAQAIL  285 (372)
T ss_pred             CCCCCCCcEEecceEEEEEECCCCCCCCEEEECCccccCCCCCCCceEEEEEEEccCCCEEEecCCEEEEEEECHHHHhC
Confidence            99999999876422              112222210                                           


Q ss_pred             -----Ee--eceEEEEEeCCCCCCCcEEEEccCcCCCCCCCCCccEEEEEEEEeccccccCCcceeE
Q 017925          155 -----IR--LKKNIKVKVPPGVSTGSILRVVGEGDAGPRGGPPGDLYVYLDVEEIPGIQRDGIDLFS  214 (363)
Q Consensus       155 -----v~--~~~~l~V~IP~Gv~~G~~irl~G~G~~~~~g~~~GDL~V~i~v~~h~~f~R~G~DL~~  214 (363)
                           +.  ..+.|+|+||+|+++|++++|+|+|++...+...|||||+|+|..|+.++.+..+|+.
T Consensus       286 G~~~~i~tldG~~i~v~ip~g~~~g~~~ri~G~G~P~~~~~~~GDL~V~~~V~~P~~Ls~~qk~~l~  352 (372)
T PRK14286        286 GAEIEVPTIDGKKAKMKIPEGTESGQVFRLKGHGMPYLGAYGKGDQHVIVKIEIPKKITRRQRELIE  352 (372)
T ss_pred             CCEEEEeCCCCCEEEEEeCCccCCCcEEEECCCCCCCCCCCCCCcEEEEEEEECCCCCCHHHHHHHH
Confidence                 00  0256899999999999999999999987655568999999999998877666555443

>PRK14292 chaperone protein DnaJ; Provisional

Probab=99.36  E-value=1.4e-12  Score=130.06  Aligned_cols=145  Identities=26%  Similarity=0.505  Sum_probs=101.8

Q ss_pred             CCCcEEEEEE-eehhhhhcCCeEEEEEeeeEeccCCCCCceeeCc---------eeeeCCCCccccEEEEeeeCCCccee
Q 017925           58 KGEDLRYDIV-LEFSESIFGAEKEFELSHLETCEVCTGTGAKMGS---------KMRICSTCGGRGQVMRTDQTPFGLFS  127 (363)
Q Consensus        58 ~g~di~~~l~-ltlee~~~G~~~~i~~~~~~~C~~C~GsG~~~g~---------~~~~C~~C~G~G~~~~~~~~~~G~~~  127 (363)
                      .|....+.++ ....+.+.|............|..|+|+|.....         ...+|+.|+|.|+.+.          
T Consensus       128 ~G~~~~v~~~r~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~----------  197 (371)
T PRK14292        128 AGEEVEVEVDRLTECEHCHGSRTEPGGKPPKTCPTCRGAGAVRAQARTIFGVVETQQPCPTCRGEGQIIT----------  197 (371)
T ss_pred             CCeEEEEEEEeeecCCCCcccccCCCCCCCccCCCCCCccEEEEEEeccCceEEEeeecCCCcccceecC----------
Confidence            4544444443 2445667776554333346789999999977522         3468999999998754          


Q ss_pred             eeecCCCCCcccEEecee--------------eeecCCCcE---------------------------------------
Q 017925          128 QVSVCPSCGGEGEVISEY--------------CRKCSGEGR---------------------------------------  154 (363)
Q Consensus       128 ~~~~C~~C~G~G~vi~~~--------------C~~C~G~G~---------------------------------------  154 (363)
                        .+|+.|.|.|.+....              -....|+|.                                       
T Consensus       198 --~~C~~C~G~g~v~~~~~~~V~Ip~G~~~G~~i~~~G~G~~~~~~~GDL~v~i~v~~h~~f~r~g~dL~~~~~isl~eA  275 (371)
T PRK14292        198 --DPCTVCRGRGRTLKAETVKVKLPRGIDEGYRIRVAGMGNEGPGGNGDLYVHIEMEPHPELRREQEHLIYEARIGFAKA  275 (371)
T ss_pred             --CCCCCCCCceEEeecceEEEEECCCCCCCcEEEEecCcCCCCCCCCCEEEEEEEecCCccccchhceeEEeccCHHHH
Confidence              7899999999875321              122333330                                       


Q ss_pred             -------Ee-eceEEEEEeCCCCCCCcEEEEccCcCCCCCCCCCccEEEEEEEEeccccccCCcceeE
Q 017925          155 -------IR-LKKNIKVKVPPGVSTGSILRVVGEGDAGPRGGPPGDLYVYLDVEEIPGIQRDGIDLFS  214 (363)
Q Consensus       155 -------v~-~~~~l~V~IP~Gv~~G~~irl~G~G~~~~~g~~~GDL~V~i~v~~h~~f~R~G~DL~~  214 (363)
                             +. ....++|+||+|+++|++++|+|+|++.+.+..+|||||+|+|+.|+.|+.+...|+.
T Consensus       276 l~G~~~~i~tldG~~~v~ip~g~~~g~~~~i~g~G~p~~~~~~~GDL~V~~~v~~P~~l~~~q~~ll~  343 (371)
T PRK14292        276 ALGGQITVPTLDGPQVIEVKPGTQHGDLHRLRGQGMPRLQGAGTGDLIVEYEIAVPKQLSPEAREALE  343 (371)
T ss_pred             hCCCeEEEECCCCCEEEecCCCcCCCcEEEECCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHH
Confidence                   01 0123579999999999999999999987666678999999999999888766655543

>TIGR02349 DnaJ_bact chaperone protein DnaJ

Probab=99.35  E-value=1.3e-12  Score=129.35  Aligned_cols=116  Identities=33%  Similarity=0.732  Sum_probs=87.2

Q ss_pred             eEeccCCCCCceeeC---------ceeeeCCCCccccEEEEeeeCCCcceeeeecCCCCCcccEEecee-----------
Q 017925           86 LETCEVCTGTGAKMG---------SKMRICSTCGGRGQVMRTDQTPFGLFSQVSVCPSCGGEGEVISEY-----------  145 (363)
Q Consensus        86 ~~~C~~C~GsG~~~g---------~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~vi~~~-----------  145 (363)
                      ...|..|+|+|....         ....+|+.|+|+|++++            .+|+.|.|.|.+....           
T Consensus       160 ~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~------------~~C~~C~G~g~v~~~~~l~V~Ip~G~~  227 (354)
T TIGR02349       160 PKTCPTCGGTGQVRRQQGTPFGFFQQQQTCPTCGGEGKIIK------------EPCSTCKGKGRVKERKTITVKIPAGVD  227 (354)
T ss_pred             CccCCCCCCeeEEEEEEeccCCceEEEEecCCCCCcceecC------------CCCCCCCCCcEecccceEEEEECCCCC
Confidence            568999999997542         23568999999998764            6799999999875422           


Q ss_pred             ---eeecCCCcE------------------------------------------------Ee-eceEEEEEeCCCCCCCc
Q 017925          146 ---CRKCSGEGR------------------------------------------------IR-LKKNIKVKVPPGVSTGS  173 (363)
Q Consensus       146 ---C~~C~G~G~------------------------------------------------v~-~~~~l~V~IP~Gv~~G~  173 (363)
                         -....|+|.                                                +. ....++|+||+|+++|+
T Consensus       228 ~G~~i~~~g~G~~~~~~~~~GDl~v~i~v~~h~~f~r~g~DL~~~~~isl~eAl~G~~~~i~~ldG~i~v~ip~g~~~g~  307 (354)
T TIGR02349       228 TGQRLRVSGKGNAGENGGPNGDLYVVIRVKPHKIFERDGNDLYIEVPISFTQAILGGEIEVPTLDGDVKLKIPAGTQSGT  307 (354)
T ss_pred             CCCEEEEecCccCCCCCCCCCCEEEEEEEecCcceEEecCCEEEEEEeCHHHHhCCCeEEEecCCceEEEEECCcccCCc
Confidence               111222220                                                00 01368999999999999


Q ss_pred             EEEEccCcCCCCCCCCCccEEEEEEEEeccccccCCccee
Q 017925          174 ILRVVGEGDAGPRGGPPGDLYVYLDVEEIPGIQRDGIDLF  213 (363)
Q Consensus       174 ~irl~G~G~~~~~g~~~GDL~V~i~v~~h~~f~R~G~DL~  213 (363)
                      +++|+|+|++.+.+..+|||||+|+|..|+.|+++..+++
T Consensus       308 ~~~i~g~G~p~~~~~~~GDL~i~~~v~~P~~l~~~~~~~l  347 (354)
T TIGR02349       308 VFRLKGKGVPRLRGNGRGDLLVTVKVETPKNLSKEQKELL  347 (354)
T ss_pred             EEEECCCCcCCCCCCCCCCEEEEEEEECCCCCCHHHHHHH
Confidence            9999999998765557899999999999998887766554

This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family.

>PRK14276 chaperone protein DnaJ; Provisional

Probab=99.35  E-value=1.5e-12  Score=130.20  Aligned_cols=129  Identities=23%  Similarity=0.492  Sum_probs=90.0

Q ss_pred             hhhhcCCeEEEEEeeeEeccCCCCCceeeC---------ceeeeCCCCccccEEEEeeeCCCcceeeeecCCCCCcccEE
Q 017925           71 SESIFGAEKEFELSHLETCEVCTGTGAKMG---------SKMRICSTCGGRGQVMRTDQTPFGLFSQVSVCPSCGGEGEV  141 (363)
Q Consensus        71 ee~~~G~~~~i~~~~~~~C~~C~GsG~~~g---------~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~v  141 (363)
                      .+.+.|.-..- -.....|+.|+|+|....         ....+|+.|+|+|.++.            .+|+.|+|.|.+
T Consensus       149 C~~C~G~G~~~-~~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~~~~------------~~C~~C~G~g~~  215 (380)
T PRK14276        149 CHTCNGSGAKP-GTSPVTCGKCHGSGVITVDTQTPLGMMRRQVTCDVCHGTGKEIK------------EPCQTCHGTGHE  215 (380)
T ss_pred             CCCCcCcccCC-CCCCccCCCCCCeeEEEEEEecCCceEEEEEECCCCCCCCcccc------------CCCCCCCCceEE
Confidence            34455544321 123468999999997632         13578999999998865            789999999986


Q ss_pred             eceeee--------------ecCCCc------------E------------------------------------Ee-ec
Q 017925          142 ISEYCR--------------KCSGEG------------R------------------------------------IR-LK  158 (363)
Q Consensus       142 i~~~C~--------------~C~G~G------------~------------------------------------v~-~~  158 (363)
                      ....-.              .-.|+|            .                                    +. ..
T Consensus       216 ~~~~~l~V~Ip~G~~~G~~i~l~G~G~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~v~tld  295 (380)
T PRK14276        216 KQAHTVSVKIPAGVETGQQIRLQGQGEAGFNGGPYGDLYVVFRVEPSKKFERDGSTIYYTLPISFVQAALGDTVEVPTVH  295 (380)
T ss_pred             EEEEEEEEEeCCCccCCcEEEEeccccCCCCCCCCcCEEEEEEEEECcceeeecceEEEEEecCHHHHhCCCeEEEEcCC
Confidence            543211              112211            0                                    00 01


Q ss_pred             eEEEEEeCCCCCCCcEEEEccCcCCCCCCCCCccEEEEEEEEeccccccCCcce
Q 017925          159 KNIKVKVPPGVSTGSILRVVGEGDAGPRGGPPGDLYVYLDVEEIPGIQRDGIDL  212 (363)
Q Consensus       159 ~~l~V~IP~Gv~~G~~irl~G~G~~~~~g~~~GDL~V~i~v~~h~~f~R~G~DL  212 (363)
                      ..++|+||+|+++|++++|+|+|++.+.+..+|||||+|+|..+..+..+...|
T Consensus       296 g~i~v~ip~g~~~g~~~~i~g~G~p~~~~~~~GDL~V~~~v~~P~~l~~~q~~~  349 (380)
T PRK14276        296 GDVELKIPAGTQTGKKFRLRGKGAPKLRGGGNGDQHVTVNIVTPTKLNDAQKEA  349 (380)
T ss_pred             CcEEEEECCCCCCCCEEEECCCCcCCCCCCCCCCEEEEEEEECCCCCCHHHHHH
Confidence            358999999999999999999999876555689999999999887665544433

>PRK14281 chaperone protein DnaJ; Provisional

Probab=99.34  E-value=2e-12  Score=129.94  Aligned_cols=141  Identities=30%  Similarity=0.567  Sum_probs=96.5

Q ss_pred             CCCcEEEEEEe-ehhhhhcCCeEEEEEeeeEeccCCCCCceeeCc---------eeeeCCCCccccEEEEeeeCCCccee
Q 017925           58 KGEDLRYDIVL-EFSESIFGAEKEFELSHLETCEVCTGTGAKMGS---------KMRICSTCGGRGQVMRTDQTPFGLFS  127 (363)
Q Consensus        58 ~g~di~~~l~l-tlee~~~G~~~~i~~~~~~~C~~C~GsG~~~g~---------~~~~C~~C~G~G~~~~~~~~~~G~~~  127 (363)
                      .|....+.+.. .+...+.|....-  .....|..|+|+|.....         ...+|+.|+|+|.++.          
T Consensus       152 ~G~~~~i~~~r~~~C~~C~G~G~~~--~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~----------  219 (397)
T PRK14281        152 KGVEKTLKIKKQVPCKECNGTGSKT--GATETCPTCHGSGEVRQASKTMFGQFVNITACPTCGGEGRVVK----------  219 (397)
T ss_pred             CCeEEEEEEEeeecCCCCCCcccCC--CCCccCCCCCCCcEEEEEEecccceEEEEEecCCCcceeeeeC----------
Confidence            45444444322 2344456654332  245789999999976321         3568999999999865          


Q ss_pred             eeecCCCCCcccEEecee--------------eeecCCCcE---------------------------------------
Q 017925          128 QVSVCPSCGGEGEVISEY--------------CRKCSGEGR---------------------------------------  154 (363)
Q Consensus       128 ~~~~C~~C~G~G~vi~~~--------------C~~C~G~G~---------------------------------------  154 (363)
                        .+|+.|+|.|.+....              -....|+|.                                       
T Consensus       220 --~~C~~C~G~g~v~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDL~i~i~~~~h~~F~R~G~DL~~~~~Isl~  297 (397)
T PRK14281        220 --DRCPACYGEGIKQGEVTVKVTVPAGVQDGNYLTLRGQGNAGPRGGAPGDLIVVIEEKPHELFVRNGDDVIYNLAVSYP  297 (397)
T ss_pred             --CCCCCCCCCccEecceEEEEecCCCCCCCCEEEEecccccCCCCCCCCcEEEEEEEcCCCCeEEecCCEEEEEEecHH
Confidence              7899999999976432              112222220                                       


Q ss_pred             ---------Ee-eceEEEEEeCCCCCCCcEEEEccCcCCCCCCCCCccEEEEEEEEeccccccCCcce
Q 017925          155 ---------IR-LKKNIKVKVPPGVSTGSILRVVGEGDAGPRGGPPGDLYVYLDVEEIPGIQRDGIDL  212 (363)
Q Consensus       155 ---------v~-~~~~l~V~IP~Gv~~G~~irl~G~G~~~~~g~~~GDL~V~i~v~~h~~f~R~G~DL  212 (363)
                               +. ....++|+||+|+++|++++|+|+|++.+.+...|||||+|+|..+..++.+...|
T Consensus       298 eAl~G~~~~i~tldg~i~v~ip~g~~~G~~~ri~g~G~P~~~~~~~GDL~V~~~V~~P~~Ls~~qk~~  365 (397)
T PRK14281        298 DLVLGTKVEVPTLDGAVKLTIPAGTQPETMLRIPGKGIGHLRGSGRGDQYVRVNVFVPKEVSHQDKEL  365 (397)
T ss_pred             HHhcCCeEEeecCCccEEEEeCCccCCCcEEEEcCCCCCCCCCCCCCCEEEEEEEEcCCCCCHHHHHH
Confidence                     11 01458999999999999999999999876555789999999999887665544433

>PRK14279 chaperone protein DnaJ; Provisional

Probab=99.33  E-value=2.5e-12  Score=128.94  Aligned_cols=142  Identities=26%  Similarity=0.509  Sum_probs=95.9

Q ss_pred             CCCCcEEEEEEe-ehhhhhcCCeEEEEEeeeEeccCCCCCceeeC-----ceeeeCCCCccccEEEEeeeCCCcceeeee
Q 017925           57 TKGEDLRYDIVL-EFSESIFGAEKEFELSHLETCEVCTGTGAKMG-----SKMRICSTCGGRGQVMRTDQTPFGLFSQVS  130 (363)
Q Consensus        57 ~~g~di~~~l~l-tlee~~~G~~~~i~~~~~~~C~~C~GsG~~~g-----~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~  130 (363)
                      ..|....+.+.. .+...+.|.-..- -.....|+.|+|+|....     ....+|+.|+|+|+++.            .
T Consensus       161 ~~G~~~~v~~~~~~~C~~C~G~G~~~-~~~~~~C~~C~G~G~~~~~~g~~~~~~~C~~C~G~G~~i~------------~  227 (392)
T PRK14279        161 AKGVTMPLRLTSPAPCTTCHGSGARP-GTSPKVCPTCNGSGVISRNQGAFGFSEPCTDCRGTGSIIE------------D  227 (392)
T ss_pred             hCCeEEEEeeeccccCCCCccccccC-CCCCCCCCCCcceEEEEEEecceEEEEecCCCCceeEEeC------------C
Confidence            345444333321 2334455654322 224578999999998642     24679999999999865            7


Q ss_pred             cCCCCCcccEEeceee--------------eecCCCcE------------------------------------------
Q 017925          131 VCPSCGGEGEVISEYC--------------RKCSGEGR------------------------------------------  154 (363)
Q Consensus       131 ~C~~C~G~G~vi~~~C--------------~~C~G~G~------------------------------------------  154 (363)
                      +|..|.|.|.+....-              ..-.|+|.                                          
T Consensus       228 ~C~~C~G~g~v~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDL~i~i~v~~h~~F~R~G~DL~~~~~Isl~eAl  307 (392)
T PRK14279        228 PCEECKGTGVTTRTRTINVRIPPGVEDGQRIRLAGQGEAGLRGAPSGDLYVTVHVRPDKVFGRDGDDLTVTVPVSFTELA  307 (392)
T ss_pred             cCCCCCCCeEEEEeeeeEEEeCCCCCCCcEEEEeCCccCCCCCCCCCCEEEEEEEecCCcceeecCcEEEEEEccHHHHc
Confidence            8999999998764321              11222210                                          


Q ss_pred             ------Ee-eceEEEEEeCCCCCCCcEEEEccCcCCCCCCCCCccEEEEEEEEeccccccCCcce
Q 017925          155 ------IR-LKKNIKVKVPPGVSTGSILRVVGEGDAGPRGGPPGDLYVYLDVEEIPGIQRDGIDL  212 (363)
Q Consensus       155 ------v~-~~~~l~V~IP~Gv~~G~~irl~G~G~~~~~g~~~GDL~V~i~v~~h~~f~R~G~DL  212 (363)
                            +. ....++|+||+|+++|++|+|+|+|++.. +..+|||||+|+|..++.+..+...|
T Consensus       308 ~G~~~~v~~ldg~i~v~Ip~g~~~g~~iri~g~G~p~~-~~~~GDL~I~~~v~~P~~Ls~~q~~~  371 (392)
T PRK14279        308 LGSTLSVPTLDGPVGVKVPAGTADGRILRVRGRGVPKR-SGGAGDLLVTVKVAVPPNLDGAAAEA  371 (392)
T ss_pred             CCceEEEEcCCceEEEEECCCCCCCCEEEECCCCCCCC-CCCCCCEEEEEEEECCCCCCHHHHHH
Confidence                  00 01458999999999999999999999864 45689999999999887665444433

>PRK14280 chaperone protein DnaJ; Provisional

Probab=99.32  E-value=3.5e-12  Score=127.28  Aligned_cols=129  Identities=31%  Similarity=0.591  Sum_probs=89.9

Q ss_pred             hhhhcCCeEEEEEeeeEeccCCCCCceeeC---------ceeeeCCCCccccEEEEeeeCCCcceeeeecCCCCCcccEE
Q 017925           71 SESIFGAEKEFELSHLETCEVCTGTGAKMG---------SKMRICSTCGGRGQVMRTDQTPFGLFSQVSVCPSCGGEGEV  141 (363)
Q Consensus        71 ee~~~G~~~~i~~~~~~~C~~C~GsG~~~g---------~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~v  141 (363)
                      .+.+.|.-..- -.....|..|+|+|....         ....+|+.|+|+|.++.            .+|+.|+|.|.+
T Consensus       146 C~~C~G~G~~~-~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~------------~~C~~C~G~g~v  212 (376)
T PRK14280        146 CDTCHGSGAKP-GTSKETCSHCGGSGQVSVEQNTPFGRVVNRQTCPHCNGTGQEIK------------EKCPTCHGKGKV  212 (376)
T ss_pred             CCCCCCcccCC-CCCCccCCCCCCEEEEEEEeecCCceEEEEEEcCCCCCCCceec------------CCCCCCCCceEE
Confidence            44556644321 123567999999997532         24568999999998764            789999999987


Q ss_pred             eceee--------------eecCCCc------------E------------------------------------Ee-ec
Q 017925          142 ISEYC--------------RKCSGEG------------R------------------------------------IR-LK  158 (363)
Q Consensus       142 i~~~C--------------~~C~G~G------------~------------------------------------v~-~~  158 (363)
                      ....-              ..-.|+|            .                                    +. ..
T Consensus       213 ~~~~~i~V~Ip~G~~~G~~i~l~G~G~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~tld  292 (376)
T PRK14280        213 RKRKKINVKIPAGVDNGQQIRVSGEGEPGVNGGPAGDLYVVFRVRPHEFFERDGDDIYCEMPLTFAQAALGDEIEVPTLH  292 (376)
T ss_pred             EEEEEEEEEeCCCCcCCcEEEEcccccCCCCCCCCcCEEEEEEEecCCCeEEecCCEEEEEecCHHHHhCCCEEEEecCC
Confidence            54320              1112211            0                                    11 01


Q ss_pred             eEEEEEeCCCCCCCcEEEEccCcCCCCCCCCCccEEEEEEEEeccccccCCcce
Q 017925          159 KNIKVKVPPGVSTGSILRVVGEGDAGPRGGPPGDLYVYLDVEEIPGIQRDGIDL  212 (363)
Q Consensus       159 ~~l~V~IP~Gv~~G~~irl~G~G~~~~~g~~~GDL~V~i~v~~h~~f~R~G~DL  212 (363)
                      ..++|+||+|+++|++++|+|+|++...+...|||||+|+|..+..++.+...|
T Consensus       293 g~i~v~ip~g~~~g~~~~i~g~G~p~~~~~~~GDL~v~~~v~~P~~Ls~~q~~~  346 (376)
T PRK14280        293 GKVKLKIPAGTQTGTQFRLKGKGVPNVRGYGQGDQYVVVRVVTPTKLTDRQKEL  346 (376)
T ss_pred             ceEEEEECCCCCCCcEEEEcCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHH
Confidence            358999999999999999999999866555689999999999887665444333

>PRK14293 chaperone protein DnaJ; Provisional

Probab=99.32  E-value=2.7e-12  Score=128.04  Aligned_cols=133  Identities=25%  Similarity=0.506  Sum_probs=94.6

Q ss_pred             hhhhcCCeEEEEEeeeEeccCCCCCceee-------C--ceeeeCCCCccccEEEEeeeCCCcceeeeecCCCCCcccEE
Q 017925           71 SESIFGAEKEFELSHLETCEVCTGTGAKM-------G--SKMRICSTCGGRGQVMRTDQTPFGLFSQVSVCPSCGGEGEV  141 (363)
Q Consensus        71 ee~~~G~~~~i~~~~~~~C~~C~GsG~~~-------g--~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~v  141 (363)
                      ...+.|...... .....|..|+|+|...       +  ....+|+.|+|+|+++.            .+|..|.|.|.+
T Consensus       146 C~~C~G~G~~~~-~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~------------~~C~~C~G~g~v  212 (374)
T PRK14293        146 CETCRGSGAKPG-TGPTTCSTCGGAGQVRRATRTPFGSFTQVSECPTCNGTGQVIE------------DPCDACGGQGVK  212 (374)
T ss_pred             CCCCCCcCCCCC-CCCeeCCCCCCcceEEEEEecCcceEEEEeeCCCCCcceeEec------------cCCCCCCCCccc
Confidence            344555433221 2346899999999753       1  23578999999999765            689999999986


Q ss_pred             eceee--------------eecCCCcE------------------------------------------------Eee-c
Q 017925          142 ISEYC--------------RKCSGEGR------------------------------------------------IRL-K  158 (363)
Q Consensus       142 i~~~C--------------~~C~G~G~------------------------------------------------v~~-~  158 (363)
                      ....-              ..-.|.|.                                                +.. .
T Consensus       213 ~~~~~~~V~IppG~~~G~~i~l~g~G~~~~~~~~~GDL~v~v~v~~~~~f~r~g~DL~~~~~Isl~eAl~G~~~~i~~ld  292 (374)
T PRK14293        213 QVTKKLKINIPAGVDTGTRLRVSGEGDAGLRGGPPGDLYVYLFVKNDPEFRRDGINILSEIKISYLQAILGDTLEVDTVD  292 (374)
T ss_pred             ccceEEEEEeCCCCCCCCEEEEccCccCCCCCCCCcCEEEEEEEeCCCccChhhhceEEEeccCHHHHhCCCEEEecCCC
Confidence            54211              11122110                                                000 1


Q ss_pred             eEEEEEeCCCCCCCcEEEEccCcCCCCCC-CCCccEEEEEEEEeccccccCCcceeEEE
Q 017925          159 KNIKVKVPPGVSTGSILRVVGEGDAGPRG-GPPGDLYVYLDVEEIPGIQRDGIDLFSTI  216 (363)
Q Consensus       159 ~~l~V~IP~Gv~~G~~irl~G~G~~~~~g-~~~GDL~V~i~v~~h~~f~R~G~DL~~~~  216 (363)
                      ..++|+||+++++|++++|+|+|++.+.+ +..|||||+|+|..|+.|++++.+|+..+
T Consensus       293 G~~~i~ip~~~~~g~~~ri~g~G~p~~~~~~~~GDL~v~~~v~~P~~l~~~~~~l~~~l  351 (374)
T PRK14293        293 GPVELTIPAGTQPNTVLTLENKGVPRLGNPVARGDHLITVKVKIPTRISDEERELLEKL  351 (374)
T ss_pred             CCEEEEeCCCCCCCCEEEECCCCCCCCCCCCCcCCEEEEEEEECCCCCCHHHHHHHHHH
Confidence            34789999999999999999999986543 35799999999999999999998877654

>PRK14297 chaperone protein DnaJ; Provisional

Probab=99.32  E-value=3.2e-12  Score=127.74  Aligned_cols=129  Identities=26%  Similarity=0.518  Sum_probs=89.5

Q ss_pred             hhhhcCCeEEEEEeeeEeccCCCCCceeeC---------ceeeeCCCCccccEEEEeeeCCCcceeeeecCCCCCcccEE
Q 017925           71 SESIFGAEKEFELSHLETCEVCTGTGAKMG---------SKMRICSTCGGRGQVMRTDQTPFGLFSQVSVCPSCGGEGEV  141 (363)
Q Consensus        71 ee~~~G~~~~i~~~~~~~C~~C~GsG~~~g---------~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~v  141 (363)
                      +..+.|.-.. .-.....|+.|+|+|....         ....+|+.|+|+|.++.            .+|..|+|.|.+
T Consensus       151 C~~C~G~G~~-~~~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~~~~------------~~C~~C~G~g~v  217 (380)
T PRK14297        151 CETCNGTGAK-PGTSPKTCDKCGGTGQIRVQRNTPLGSFVSTTTCDKCGGSGKVIE------------DPCNKCHGKGKV  217 (380)
T ss_pred             CCCccccccc-CCCcCccCCCccCeEEEEEEEEcCCceeEEEEeCCCCCCCceEcC------------CCCCCCCCCeEE
Confidence            3445554432 1122568999999997632         24678999999998764            789999999965


Q ss_pred             eceee--------------eecCCCc------------------------------------------------EEe-ec
Q 017925          142 ISEYC--------------RKCSGEG------------------------------------------------RIR-LK  158 (363)
Q Consensus       142 i~~~C--------------~~C~G~G------------------------------------------------~v~-~~  158 (363)
                      ....-              ..-.|+|                                                .+. ..
T Consensus       218 ~~~~~i~V~Ip~G~~~G~~I~l~g~G~~~~~~~~~GDL~v~v~v~~h~~f~R~G~DL~~~~~Isl~eAl~G~~~~i~~ld  297 (380)
T PRK14297        218 RKNRKIKVNVPAGVDTGNVIPLRGQGEHGKNGGPTGDLYINIRVAPHKTFKRKGFDIYIDKHISFAKAALGTEIKVPTVD  297 (380)
T ss_pred             EeEeEEEEEeCCCCCCCcEEEEecCccCCCCCCCCccEEEEEEEcCCCCEEEeCCCEEEEEEeCHHHHhCCCcEEEEcCC
Confidence            43221              1111211                                                000 01


Q ss_pred             eEEEEEeCCCCCCCcEEEEccCcCCCCCCCCCccEEEEEEEEeccccccCCcce
Q 017925          159 KNIKVKVPPGVSTGSILRVVGEGDAGPRGGPPGDLYVYLDVEEIPGIQRDGIDL  212 (363)
Q Consensus       159 ~~l~V~IP~Gv~~G~~irl~G~G~~~~~g~~~GDL~V~i~v~~h~~f~R~G~DL  212 (363)
                      ..++|+||+|+++|++++|+|+|++...+...|||||+|+|..+..+..+...|
T Consensus       298 g~~~v~ip~g~~~g~~~ri~g~G~p~~~~~~~GDL~v~~~v~~P~~ls~~q~~~  351 (380)
T PRK14297        298 GEVKYEVPAGTQPGTVFRLKGKGVPRVNSTGRGNQYVTVIVDIPKKLNSKQKEA  351 (380)
T ss_pred             CcEEEEECCCcCCCCEEEEcCCCcCCCCCCCCCcEEEEEEEEcCCCCCHHHHHH
Confidence            458999999999999999999999866556789999999999887665544433

>PRK14277 chaperone protein DnaJ; Provisional

Probab=99.31  E-value=4.7e-12  Score=126.79  Aligned_cols=143  Identities=27%  Similarity=0.495  Sum_probs=95.3

Q ss_pred             CCCcEEEEEEee-hhhhhcCCeEEEEEeeeEeccCCCCCceeeC---------ceeeeCCCCccccEEEEeeeCCCccee
Q 017925           58 KGEDLRYDIVLE-FSESIFGAEKEFELSHLETCEVCTGTGAKMG---------SKMRICSTCGGRGQVMRTDQTPFGLFS  127 (363)
Q Consensus        58 ~g~di~~~l~lt-lee~~~G~~~~i~~~~~~~C~~C~GsG~~~g---------~~~~~C~~C~G~G~~~~~~~~~~G~~~  127 (363)
                      .|....+.++.. +...+.|....- -.....|..|+|+|....         ....+|+.|+|+|.++.          
T Consensus       144 ~G~~~~v~~~r~~~C~~C~G~G~~~-~~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~~~~----------  212 (386)
T PRK14277        144 FGTEKEIEVERFEKCDVCKGSGAKP-GSKPVTCPVCHGTGQVRTRQNTPFGRIVNIRTCDRCHGEGKIIT----------  212 (386)
T ss_pred             CCeEEEEEEEeeccCCCCCCCCcCC-CCCCccCCCCCCEEEEEEEEeccCceEEEEEECCCCCcceeecc----------
Confidence            455444443322 233455544321 123468999999997642         13468999999998864          


Q ss_pred             eeecCCCCCcccEEeceee--------------eecCCCcE------------E--------------------------
Q 017925          128 QVSVCPSCGGEGEVISEYC--------------RKCSGEGR------------I--------------------------  155 (363)
Q Consensus       128 ~~~~C~~C~G~G~vi~~~C--------------~~C~G~G~------------v--------------------------  155 (363)
                        .+|+.|+|.|.+....-              ..-.|+|.            +                          
T Consensus       213 --~~C~~C~G~g~v~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~  290 (386)
T PRK14277        213 --DPCNKCGGTGRIRRRRKIKVNIPAGIDDGQMITLRGEGEPGIKGGPNGDLYIVIKVKPHPLFKREGYNVYLEMPITFT  290 (386)
T ss_pred             --CCCCCCCCCcEEeeeeEEEEecCCCccCCcEEEEccccccCCCCCCCccEEEEEEEecCCCeEEecCCEEEEEEcCHH
Confidence              78999999998754321              12222221            0                          


Q ss_pred             --------ee---ceEEEEEeCCCCCCCcEEEEccCcCCCCCCCCCccEEEEEEEEeccccccCCccee
Q 017925          156 --------RL---KKNIKVKVPPGVSTGSILRVVGEGDAGPRGGPPGDLYVYLDVEEIPGIQRDGIDLF  213 (363)
Q Consensus       156 --------~~---~~~l~V~IP~Gv~~G~~irl~G~G~~~~~g~~~GDL~V~i~v~~h~~f~R~G~DL~  213 (363)
                              ..   ...++|+||+|+++|++++|+|+|++...+...|||||+|+|..+..++.+..+++
T Consensus       291 eAl~G~~~~i~tldG~~~v~ip~g~~~g~~~ri~g~G~p~~~~~~~GDL~v~~~V~~P~~Ls~~qk~~l  359 (386)
T PRK14277        291 DAALGGEIEIPTLDGKVKFTIPEGTQTGTKFRLRGKGIPHLRGRGRGDQIVKVYIEVPKKLTEKQKELL  359 (386)
T ss_pred             HHhCCCEEEEEcCCCCEEEEECCCCCCCCEEEECCCCCCCCCCCCCCCEEEEEEEEeCCCCCHHHHHHH
Confidence                    00   12378999999999999999999998665556799999999998876655444433

>PRK14289 chaperone protein DnaJ; Provisional

Probab=99.31  E-value=4.6e-12  Score=126.93  Aligned_cols=114  Identities=31%  Similarity=0.591  Sum_probs=84.9

Q ss_pred             eeEeccCCCCCceeeCc---------eeeeCCCCccccEEEEeeeCCCcceeeeecCCCCCcccEEecee----------
Q 017925           85 HLETCEVCTGTGAKMGS---------KMRICSTCGGRGQVMRTDQTPFGLFSQVSVCPSCGGEGEVISEY----------  145 (363)
Q Consensus        85 ~~~~C~~C~GsG~~~g~---------~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~vi~~~----------  145 (363)
                      ....|..|+|+|.....         ...+|+.|+|+|+++.            ..|+.|+|.|.+....          
T Consensus       170 ~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~~~~------------~~C~~C~G~g~v~~~~~~~V~Ip~G~  237 (386)
T PRK14289        170 GSETCPTCKGSGSVTRVQNTILGTMQTQSTCPTCNGEGKIIK------------KKCKKCGGEGIVYGEEVITVKIPAGV  237 (386)
T ss_pred             CCCcCCCCcCeEEEEEEEecccceEEEEEecCCCCccccccC------------cCCCCCCCCcEEeeeEEEEEEeCCCC
Confidence            45789999999987522         3578999999998754            7899999999875432          


Q ss_pred             ----eeecCCCcE------------------------------------------------Eee-ceEEEEEeCCCCCCC
Q 017925          146 ----CRKCSGEGR------------------------------------------------IRL-KKNIKVKVPPGVSTG  172 (363)
Q Consensus       146 ----C~~C~G~G~------------------------------------------------v~~-~~~l~V~IP~Gv~~G  172 (363)
                          -..-.|+|.                                                +.. ...++|+||+|+++|
T Consensus       238 ~~G~~i~l~g~G~~~~~~~~~GDL~v~v~v~~~~~f~r~g~DL~~~~~Isl~eAl~G~~~~i~~ldg~i~v~ip~g~~~g  317 (386)
T PRK14289        238 AEGMQLSMNGKGNAGKHGGVNGDLLVVIEEEPHPELIRDENDLIYNLLLSVPTAALGGAVEVPTIDGKAKVKIEAGTQPG  317 (386)
T ss_pred             CCCCEEEEeccccCCCCCCCCccEEEEEEEecCCcccccccceeEEeccCHHHHhCCCeEEeecCCceEEEEECCccCCC
Confidence                111222210                                                110 145899999999999


Q ss_pred             cEEEEccCcCCCCCCCCCccEEEEEEEEeccccccCCc
Q 017925          173 SILRVVGEGDAGPRGGPPGDLYVYLDVEEIPGIQRDGI  210 (363)
Q Consensus       173 ~~irl~G~G~~~~~g~~~GDL~V~i~v~~h~~f~R~G~  210 (363)
                      ++++|+|+|.+.+.+..+|||||+|+|+.+..++.+..
T Consensus       318 ~~~ri~g~G~p~~~~~~~GDL~v~~~v~~P~~l~~~q~  355 (386)
T PRK14289        318 KVLRLRNKGLPSVNGYGTGDLLVNVSVYIPETLSKEEK  355 (386)
T ss_pred             cEEEECCCCcCCCCCCCCCcEEEEEEEEeCCCCCHHHH
Confidence            99999999998766667899999999998866554433

>PRK14295 chaperone protein DnaJ; Provisional

Probab=99.29  E-value=6.2e-12  Score=126.03  Aligned_cols=141  Identities=27%  Similarity=0.492  Sum_probs=95.7

Q ss_pred             CCCcEEEEEEe-ehhhhhcCCeEEEEEeeeEeccCCCCCceeeC-----ceeeeCCCCccccEEEEeeeCCCcceeeeec
Q 017925           58 KGEDLRYDIVL-EFSESIFGAEKEFELSHLETCEVCTGTGAKMG-----SKMRICSTCGGRGQVMRTDQTPFGLFSQVSV  131 (363)
Q Consensus        58 ~g~di~~~l~l-tlee~~~G~~~~i~~~~~~~C~~C~GsG~~~g-----~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~  131 (363)
                      .|....+.+.- .+.+.+.|.-..- -.....|..|+|+|....     ....+|+.|+|+|.++.            .+
T Consensus       155 ~G~~k~i~~~r~~~C~~C~G~G~~~-~~~~~~C~~C~G~G~~~~~~g~~~~~~~C~~C~G~G~~~~------------~~  221 (389)
T PRK14295        155 DGATVPLRLTSQAPCPACSGTGAKN-GTTPRVCPTCSGTGQVSRNSGGFSLSEPCPDCKGRGLIAD------------DP  221 (389)
T ss_pred             CCceEEEEeeccccCCCCcccccCC-CCCCcCCCCCCCEeEEEEEecceEEEEecCCCcceeEEec------------cC
Confidence            45544444321 2345566654321 133478999999997532     24578999999999865            78


Q ss_pred             CCCCCcccEEecee--------------eeecCCCc--------------------------------------------
Q 017925          132 CPSCGGEGEVISEY--------------CRKCSGEG--------------------------------------------  153 (363)
Q Consensus       132 C~~C~G~G~vi~~~--------------C~~C~G~G--------------------------------------------  153 (363)
                      |..|.|.|.+....              -..-.|+|                                            
T Consensus       222 C~~C~G~g~~~~~~~l~V~Ip~G~~~G~~i~l~g~G~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~  301 (389)
T PRK14295        222 CLVCKGSGRAKSSRTMQVRIPAGVSDGQRIRLRGKGAPGERGGPAGDLYVVVHVDPHPVFGRSGDNLTVTVPVTFPEAAL  301 (389)
T ss_pred             CCCCCCCceEeeeeEEEEEeCCCCCCCCEEEEcccccCCCCCCCCccEEEEEEEecCCCEEEecCCEEEEEeecHHHHhC
Confidence            99999999875432              11112211                                            


Q ss_pred             ----EEe--eceEEEEEeCCCCCCCcEEEEccCcCCCCCCCCCccEEEEEEEEeccccccCCcce
Q 017925          154 ----RIR--LKKNIKVKVPPGVSTGSILRVVGEGDAGPRGGPPGDLYVYLDVEEIPGIQRDGIDL  212 (363)
Q Consensus       154 ----~v~--~~~~l~V~IP~Gv~~G~~irl~G~G~~~~~g~~~GDL~V~i~v~~h~~f~R~G~DL  212 (363)
                          .+.  ..++++|+||+|+++|++|+|+|+|++.. ++.+|||||+|+|..+..+..+...|
T Consensus       302 G~~~~I~tldG~~~~v~ip~g~~~g~~iri~G~G~p~~-~~~~GDL~i~~~v~~P~~Ls~~qk~~  365 (389)
T PRK14295        302 GAEVRVPTLGGPPVTVKLPPGTPNGRVLRVRGKGAVRK-DGTRGDLLVTVEVAVPKDLSGKAREA  365 (389)
T ss_pred             CCeEEEECCCCCEEEEEECCccCCCcEEEECCCCcCCC-CCCCCCEEEEEEEECCCCCCHHHHHH
Confidence                010  01589999999999999999999999864 45689999999999887665444433

>PRK14283 chaperone protein DnaJ; Provisional

Probab=99.27  E-value=8.2e-12  Score=124.75  Aligned_cols=143  Identities=26%  Similarity=0.502  Sum_probs=95.8

Q ss_pred             CCCcEEEEEEee-hhhhhcCCeEEEEEeeeEeccCCCCCceeeC---------ceeeeCCCCccccEEEEeeeCCCccee
Q 017925           58 KGEDLRYDIVLE-FSESIFGAEKEFELSHLETCEVCTGTGAKMG---------SKMRICSTCGGRGQVMRTDQTPFGLFS  127 (363)
Q Consensus        58 ~g~di~~~l~lt-lee~~~G~~~~i~~~~~~~C~~C~GsG~~~g---------~~~~~C~~C~G~G~~~~~~~~~~G~~~  127 (363)
                      .|....+.+... ..+.+.|....- -.....|..|+|+|....         ....+|++|+|+|..+.          
T Consensus       135 ~G~~~~i~~~r~~~C~~C~G~G~~~-~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~----------  203 (378)
T PRK14283        135 SGVEKDIKVRHTKKCPVCNGSRAEP-GSEVKTCPTCGGTGQVKQVRNTILGQMMNVTTCPDCQGEGKIVE----------  203 (378)
T ss_pred             CCcceEEEeeeeccCCCCCccccCC-CCCCccCCCcCCccEEEEEEeccCceEEEEEECCCCCccceecC----------
Confidence            454444443322 344566654321 123467999999998642         23578999999998754          


Q ss_pred             eeecCCCCCcccEEeceeee--------------ecCCCc----------------------------------------
Q 017925          128 QVSVCPSCGGEGEVISEYCR--------------KCSGEG----------------------------------------  153 (363)
Q Consensus       128 ~~~~C~~C~G~G~vi~~~C~--------------~C~G~G----------------------------------------  153 (363)
                        .+|..|+|.|.+....-.              .-.|+|                                        
T Consensus       204 --~~C~~C~G~g~v~~~~~l~V~IppG~~~G~~i~l~g~G~~~~~~~~~GDLiv~i~v~~~~~f~r~G~DL~~~~~Isl~  281 (378)
T PRK14283        204 --KPCSNCHGKGVVRETKTISVKIPAGVETGSRLRVSGEGEMGDRGGEPGDLYVVIKVKPHKIFRREGANLYYEKPISFV  281 (378)
T ss_pred             --CCCCCCCCceeeccceeEEEEECCCCCCCcEEEEeccccCCCCCCCCccEEEEEEEEcCCCEEEecCCEEEEEecCHH
Confidence              789999999987543211              111211                                        


Q ss_pred             --------EEe-eceEEEEEeCCCCCCCcEEEEccCcCCCCCCCCCccEEEEEEEEeccccccCCccee
Q 017925          154 --------RIR-LKKNIKVKVPPGVSTGSILRVVGEGDAGPRGGPPGDLYVYLDVEEIPGIQRDGIDLF  213 (363)
Q Consensus       154 --------~v~-~~~~l~V~IP~Gv~~G~~irl~G~G~~~~~g~~~GDL~V~i~v~~h~~f~R~G~DL~  213 (363)
                              .+. ...+|+|+||+|+++|++++|+|+|++...+...|||||+|+|..++.++-+...|+
T Consensus       282 eAl~G~~~~i~tldG~i~v~ip~g~~~g~~~ri~g~G~p~~~~~~~GdL~v~~~v~~P~~l~~~q~~ll  350 (378)
T PRK14283        282 QAALGDTVDVPTIDGPVELKIPAGTQSGTTFRLKGHGMPSLRWSGKGNLYVKVKVVVPKKLSPKQKELL  350 (378)
T ss_pred             HHhcCCeEEEEcCCceEEEEeCCCCCCCCEEEECCCCCCCCCCCCCCCEEEEEEEEeCCCCCHHHHHHH
Confidence                    011 013689999999999999999999998655556899999999998876654444333

>PRK14296 chaperone protein DnaJ; Provisional

Probab=99.27  E-value=8.2e-12  Score=124.45  Aligned_cols=142  Identities=23%  Similarity=0.453  Sum_probs=94.7

Q ss_pred             CCCcEEEEEE-eehhhhhcCCeEEEEEeeeEeccCCCCCceeeCc---------eeeeCCCCccccEEEEeeeCCCccee
Q 017925           58 KGEDLRYDIV-LEFSESIFGAEKEFELSHLETCEVCTGTGAKMGS---------KMRICSTCGGRGQVMRTDQTPFGLFS  127 (363)
Q Consensus        58 ~g~di~~~l~-ltlee~~~G~~~~i~~~~~~~C~~C~GsG~~~g~---------~~~~C~~C~G~G~~~~~~~~~~G~~~  127 (363)
                      .|....+.+. ..+...+.|...+- -.....|..|+|+|.....         ...+|+.|+|+|.++.          
T Consensus       138 ~G~~~~i~~~~~~~C~~C~G~G~~~-~~~~~~C~~C~G~G~~~~~~~~g~~~~q~~~~C~~C~G~G~~~~----------  206 (372)
T PRK14296        138 FGVDKIIELDLLTNCSKCFGSGAES-NSDIHICNNCHGTGEVLVQKNMGFFQFQQSAKCNVCNGAGKIIK----------  206 (372)
T ss_pred             CCeeEEEEEeeeeccCCCCCCccCC-CCCCccCCCCCCCceEEEEEeccceEEEEEecCCCcCCcceeec----------
Confidence            4444444332 23455666654322 1234679999999976432         3468999999999865          


Q ss_pred             eeecCCCCCcccEEecee--------------eeecCCCc-----------------------EEee-------------
Q 017925          128 QVSVCPSCGGEGEVISEY--------------CRKCSGEG-----------------------RIRL-------------  157 (363)
Q Consensus       128 ~~~~C~~C~G~G~vi~~~--------------C~~C~G~G-----------------------~v~~-------------  157 (363)
                        .+|+.|+|.|.+....              -..-.|+|                       ..+.             
T Consensus       207 --~~C~~C~G~g~v~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDL~v~v~v~~h~~F~R~~G~DL~~~~~Isl  284 (372)
T PRK14296        207 --NKCKNCKGKGKYLERKKIEVNIPKGIRPNQQIKLSQKGHASLNNGVNGDLIIDIYLKESKVFEIINNNDILMTYNISY  284 (372)
T ss_pred             --ccccCCCCceEEEEEEEEEEEECCCCCCCCEEEEeccccCCCCCCCCccEEEEEEEeCCCCEEEeCCCcEEEEEecCH
Confidence              7899999999765322              11122221                       0010             


Q ss_pred             --------------ceEEEEEeCCCCCCCcEEEEccCcCCCC-CCCCCccEEEEEEEEeccccccCCcce
Q 017925          158 --------------KKNIKVKVPPGVSTGSILRVVGEGDAGP-RGGPPGDLYVYLDVEEIPGIQRDGIDL  212 (363)
Q Consensus       158 --------------~~~l~V~IP~Gv~~G~~irl~G~G~~~~-~g~~~GDL~V~i~v~~h~~f~R~G~DL  212 (363)
                                    ...++|+||+++++|++++|+|+|++.. .....|||||+|+|..+..+..+...|
T Consensus       285 ~eAllG~~~~i~tldG~~~v~ip~~t~~g~~~ri~GkGmP~~~~~~~~GDL~V~~~V~~P~~Ls~~q~~~  354 (372)
T PRK14296        285 LDAILGNEIIIKTLDGDIKYKLPKSINSNELIIINNKGLYKSINKDKRGDLIIKVNIVVPKNLSKKEKEL  354 (372)
T ss_pred             HHHhCCCEEEeeCCCCCEEEEECCccCCCcEEEEcCCCCCcCCCCCCcCCEEEEEEEECCCCCCHHHHHH
Confidence                          1348999999999999999999999733 234579999999999887665544443

>PRK14291 chaperone protein DnaJ; Provisional

Probab=99.26  E-value=2.7e-11  Score=121.17  Aligned_cols=106  Identities=34%  Similarity=0.663  Sum_probs=80.0

Q ss_pred             eeEeccCCCCCceeeC-----ceeeeCCCCccccEEEEeeeCCCcceeeeecCCCCCcccEEecee--------------
Q 017925           85 HLETCEVCTGTGAKMG-----SKMRICSTCGGRGQVMRTDQTPFGLFSQVSVCPSCGGEGEVISEY--------------  145 (363)
Q Consensus        85 ~~~~C~~C~GsG~~~g-----~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~vi~~~--------------  145 (363)
                      ....|+.|+|+|....     ....+|+.|+|+|. +.            .+|+.|+|.|.+....              
T Consensus       172 ~~~~C~~C~G~G~~~~~~g~~~~~~~C~~C~G~G~-~~------------~~C~~C~G~g~v~~~~~l~V~Ip~G~~~G~  238 (382)
T PRK14291        172 GEKVCPTCGGSGEIYQRGGFFRISQTCPTCGGEGV-LR------------EPCSKCNGRGLVIKKETIKVRIPPGVDNGS  238 (382)
T ss_pred             CCccCCCCCCceEEEEecceEEEEecCCCCCCceE-Ec------------cCCCCCCCCceEEeeeEEEEEeCCCCCCCC
Confidence            3567999999997642     24678999999995 32            6899999999875432              


Q ss_pred             eeecCCCcE------------------------------------------------Ee--eceEEEEEeCCCCCCCcEE
Q 017925          146 CRKCSGEGR------------------------------------------------IR--LKKNIKVKVPPGVSTGSIL  175 (363)
Q Consensus       146 C~~C~G~G~------------------------------------------------v~--~~~~l~V~IP~Gv~~G~~i  175 (363)
                      -....|+|.                                                +.  ..+.++|+||+|+++|++|
T Consensus       239 ~i~~~g~G~~~~~g~~~GDL~v~i~~~~h~~F~r~G~DL~~~~~Isl~eAl~G~~~~i~~ldG~~l~V~Ip~g~~~G~~i  318 (382)
T PRK14291        239 KLRVPGKGHAGRFGGPPGDLYIIVKVKPHPLFERRGDNLYLDVNITVAEAVLGTELEVPLLDGKKEKVKIPPGTKEGDKI  318 (382)
T ss_pred             EEEEecCcCCCCCCCCCccEEEEEEEccCCCeeeecCCeEEEEEeeHHHHhCCCEEEEecCCCCEEEEEECCccCCCCEE
Confidence            122233221                                                00  0157899999999999999


Q ss_pred             EEccCcCCCCCCCCCccEEEEEEEEecc
Q 017925          176 RVVGEGDAGPRGGPPGDLYVYLDVEEIP  203 (363)
Q Consensus       176 rl~G~G~~~~~g~~~GDL~V~i~v~~h~  203 (363)
                      +|+|+|++.+.+..+|||||+|+|..+.
T Consensus       319 ~i~G~G~p~~~~~~~GDL~V~~~V~~P~  346 (382)
T PRK14291        319 RVPGKGMPRLKGSGYGDLVVRVHIDVPK  346 (382)
T ss_pred             EECCCCCCCCCCCCCCCEEEEEEEEeCC
Confidence            9999999876555789999999999875

>PTZ00037 DnaJ_C chaperone protein; Provisional

Probab=99.24  E-value=1.7e-11  Score=123.86  Aligned_cols=128  Identities=23%  Similarity=0.478  Sum_probs=89.9

Q ss_pred             hhhhhcCCeEEEEEeeeEeccCCCCCceeeC---------ceeeeCCCCccccEEEEeeeCCCcceeeeecCCCCCcccE
Q 017925           70 FSESIFGAEKEFELSHLETCEVCTGTGAKMG---------SKMRICSTCGGRGQVMRTDQTPFGLFSQVSVCPSCGGEGE  140 (363)
Q Consensus        70 lee~~~G~~~~i~~~~~~~C~~C~GsG~~~g---------~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~  140 (363)
                      +...+.|....  -.....|..|+|+|....         ....+|+.|+|+|.++...          .+|+.|+|.|.
T Consensus       152 ~C~~C~G~G~~--~~~~~~C~~C~G~G~~~~~~~~g~~~~q~~~~C~~C~G~G~~i~~~----------~~C~~C~G~g~  219 (421)
T PTZ00037        152 ICANCEGHGGP--KDAFVDCKLCNGQGIRVQIRQMGSMIHQTQSTCNSCNGQGKIIPES----------KKCKNCSGKGV  219 (421)
T ss_pred             cccccCCCCCC--CCCCccCCCCCCCCeEEEEEeecceeeEEEEeCCCCCCcceecccc----------ccCCcCCCcce
Confidence            34556665532  224578999999997421         2456899999999976422          68999999998


Q ss_pred             Eecee--------------eeecCCCcE-------------Ee------------------------------------e
Q 017925          141 VISEY--------------CRKCSGEGR-------------IR------------------------------------L  157 (363)
Q Consensus       141 vi~~~--------------C~~C~G~G~-------------v~------------------------------------~  157 (363)
                      +....              -....|+|-             +.                                    .
T Consensus       220 v~~~~~l~V~Ip~G~~dG~~I~~~G~Gd~~~~~~pGDLiv~I~~~ph~~F~R~G~DL~~~~~Isl~eAllG~~i~I~tLd  299 (421)
T PTZ00037        220 KKTRKILEVNIDKGVPNQHKITFHGEADEKPNEIPGNVVFILNEKPHDTFKREGGDLFITKKISLYEALTGFVFYITHLD  299 (421)
T ss_pred             eeeeeEEEEeeCCCCCCCcEEEEecccCCCCCCCCCcEEEEEEecCCCCcEEeCCeEEEEEeCCHHHHhcCCEEEeeCCC
Confidence            76432              122333321             00                                    0


Q ss_pred             ceEEEEEeCCC--CCCCcEEEEccCcCCCCCC-CCCccEEEEEEEEec--cccccCC
Q 017925          158 KKNIKVKVPPG--VSTGSILRVVGEGDAGPRG-GPPGDLYVYLDVEEI--PGIQRDG  209 (363)
Q Consensus       158 ~~~l~V~IP~G--v~~G~~irl~G~G~~~~~g-~~~GDL~V~i~v~~h--~~f~R~G  209 (363)
                      .+.|.|+||+|  +++|++++|+|+|++...+ ...|||||+|+|..+  ..++.+.
T Consensus       300 G~~l~I~ip~g~vt~pg~~~~I~geGmP~~~~~~~rGDL~V~~~V~~P~~~~Ls~~q  356 (421)
T PTZ00037        300 GRKLLVNTPPGEVVKPGDIKVINNEGMPTYKSPFKKGNLYVTFEVIFPVDRKFTNEE  356 (421)
T ss_pred             CCeEEEEeCCCcccCCCcEEEeCCCCcccCCCCCCCCCEEEEEEEEcCCCCCCCHHH
Confidence            15799999999  9999999999999985433 457999999999988  6555443

>PRK14299 chaperone protein DnaJ; Provisional

Probab=98.94  E-value=1.6e-09  Score=104.78  Aligned_cols=81  Identities=30%  Similarity=0.459  Sum_probs=68.5

Q ss_pred             ccEEEEEEEEeccccccCCcceeEEEEeceEEeecCcEEEEeccCce-EEEecCCCCCCCcEEEEccCCCCCCCCCCCCc
Q 017925          191 GDLYVYLDVEEIPGIQRDGIDLFSTISISYLDAIMGTVVKVKTVEGI-SELQVPPGTQPGDVLVLAKKGAPKLNKPSIRG  269 (363)
Q Consensus       191 GDL~V~i~v~~h~~f~R~G~DL~~~~~I~l~eAllG~~~~v~tldG~-~~l~ip~gtq~g~~~~l~g~G~P~~~~~~~rG  269 (363)
                      ||+++.+.     .+.|+|+||++++.|+|.||++|++++| ++++. ++|+||+|+++|++++++|+|++.       |
T Consensus       116 g~~~~~~~-----~~~~~g~dl~~~l~isL~ea~~G~~~~i-~l~g~~~~V~Ip~G~~~G~~ir~~g~G~~~-------G  182 (291)
T PRK14299        116 GDLFGSVG-----RRARKGRDLEAELPLTLEEAYRGGEKVV-EVAGERLSVRIPPGVREGQVIRLAGKGRQG-------G  182 (291)
T ss_pred             cccccccc-----CCCCCCCCEEEEEEecHHHHhCCCeEEE-eeCCEEEEEecCCCcCCCcEEEECCCCCCC-------C
Confidence            56664432     2457899999999999999999999998 78885 789999999999999999999972       9


Q ss_pred             cEEEEEEEEcCCCCC
Q 017925          270 DHLFTVKVTIPNRIS  284 (363)
Q Consensus       270 DL~V~~~V~~P~~l~  284 (363)
                      ||||+|+|.-+..+.
T Consensus       183 DL~v~i~v~~h~~f~  197 (291)
T PRK14299        183 DLYLVVRLLPHPVFR  197 (291)
T ss_pred             CEEEEEEEcCCCCeE
Confidence            999999998766543

>PF01556 CTDII: DnaJ C terminal domain; InterPro: IPR002939 Molecular chaperones are a diverse family of proteins that function to protect proteins in the intracellular milieu from irreversible aggregation during synthesis and in times of cellular stress

Probab=98.94  E-value=1.3e-09  Score=85.46  Aligned_cols=49  Identities=43%  Similarity=0.758  Sum_probs=38.2

Q ss_pred             eEEEEEeCCCCCCCcEEEEccCcCCCCCCC-CCccEEEEEEEEecccccc
Q 017925          159 KNIKVKVPPGVSTGSILRVVGEGDAGPRGG-PPGDLYVYLDVEEIPGIQR  207 (363)
Q Consensus       159 ~~l~V~IP~Gv~~G~~irl~G~G~~~~~g~-~~GDL~V~i~v~~h~~f~R  207 (363)
                      ++++|+||+|+++|+.++++|+|++...+. ..|||||+|+|..+..++.
T Consensus        27 ~~~~i~ip~~~~~g~~~~i~g~G~p~~~~~~~~GdL~v~~~V~~P~~ls~   76 (81)
T PF01556_consen   27 KTIKIKIPPGTQPGQQLRIKGKGMPKPKGGGKRGDLIVKFEVEFPKKLSP   76 (81)
T ss_dssp             -EEEEEETST-STT-EEEETTESEEESSSTTSBEEEEEEEEEE--SSTSH
T ss_pred             CEEEEeccCccCCCcEEeecCCCCCcCCCCCCcCCEEEEEEEECCCCCCH
Confidence            578899999999999999999999765544 7999999999998876653

The bacterial molecular chaperone DnaK is an enzyme that couples cycles of ATP binding, hydrolysis, and ADP release by an N-terminal ATP-hydrolizing domain to cycles of sequestration and release of unfolded proteins by a C-terminal substrate binding domain. Dimeric GrpE is the co-chaperone for DnaK, and acts as a nucleotide exchange factor, stimulating the rate of ADP release 5000-fold []. DnaK is itself a weak ATPase; ATP hydrolysis by DnaK is stimulated by its interaction with another co-chaperone, DnaJ. Thus the co-chaperones DnaJ and GrpE are capable of tightly regulating the nucleotide-bound and substrate-bound state of DnaK in ways that are necessary for the normal housekeeping functions and stress-related functions of the DnaK molecular chaperone cycle. Besides stimulating the ATPase activity of DnaK through its J-domain, DnaJ also associates with unfolded polypeptide chains and prevents their aggregation []. Thus, DnaK and DnaJ may bind to one and the same polypeptide chain to form a ternary complex. The formation of a ternary complex may result in cis-interaction of the J-domain of DnaJ with the ATPase domain of DnaK. An unfolded polypeptide may enter the chaperone cycle by associating first either with ATP-liganded DnaK or with DnaJ. DnaK interacts with both the backbone and side chains of a peptide substrate; it thus shows binding polarity and admits only L-peptide segments. In contrast, DnaJ has been shown to bind both L- and D-peptides and is assumed to interact only with the side chains of the substrate. This domain consists of the C-terminal region of the DnaJ protein. The function of this domain is unknown. It is found associated with IPR001623 from INTERPRO and IPR001305 from INTERPRO. ; GO: 0051082 unfolded protein binding, 0006457 protein folding; PDB: 2Q2G_A 2QLD_A 3AGX_A 3AGZ_A 3AGY_A 3I38_J 3LZ8_B 2B26_B 1C3G_A 1XAO_B ....

>PLN03165 chaperone protein dnaJ-related; Provisional

Probab=98.93  E-value=3.4e-09  Score=87.68  Aligned_cols=77  Identities=31%  Similarity=0.638  Sum_probs=58.0

Q ss_pred             CCcEEEEEEeehhhhhcCCeEEEEEeeeEeccCCCCCceeeCceeeeCCCCccccEEEEeeeCCCcceeeeecCCCCCcc
Q 017925           59 GEDLRYDIVLEFSESIFGAEKEFELSHLETCEVCTGTGAKMGSKMRICSTCGGRGQVMRTDQTPFGLFSQVSVCPSCGGE  138 (363)
Q Consensus        59 g~di~~~l~ltlee~~~G~~~~i~~~~~~~C~~C~GsG~~~g~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~  138 (363)
                      |-++.+..++..++..         ...+.|..|+|+|.+      +|+.|+|+|.+...+   .+.++++.+|+.|+|.
T Consensus        23 ~~~~~~~~q~~~~~~~---------~~~v~C~~C~GsG~~------~C~~C~G~G~v~~~~---~g~~q~~~~C~~C~G~   84 (111)
T PLN03165         23 GIPVFYETQIDNAAKR---------ENTQPCFPCSGTGAQ------VCRFCVGSGNVTVEL---GGGEKEVSKCINCDGA   84 (111)
T ss_pred             CCcEEEEEeeehhhhh---------ccCCCCCCCCCCCCc------CCCCCcCcCeEEEEe---CCcEEEEEECCCCCCc
Confidence            3456666565554332         345789999999983      899999999987543   2346667899999999


Q ss_pred             cEEeceeeeecCCCcEEe
Q 017925          139 GEVISEYCRKCSGEGRIR  156 (363)
Q Consensus       139 G~vi~~~C~~C~G~G~v~  156 (363)
                      |++   +|+.|+|.|++.
T Consensus        85 Gk~---~C~~C~G~G~~~   99 (111)
T PLN03165         85 GSL---TCTTCQGSGIQP   99 (111)
T ss_pred             cee---eCCCCCCCEEEe
Confidence            985   499999999864

>PRK10266 curved DNA-binding protein CbpA; Provisional

Probab=98.74  E-value=2.1e-08  Score=97.67  Aligned_cols=74  Identities=18%  Similarity=0.370  Sum_probs=61.3

Q ss_pred             cCCcceeEEEEeceEEeecCcEEEE----eccC--c--------eEEEecCCCCCCCcEEEEccCCCCCCCCCCCCccEE
Q 017925          207 RDGIDLFSTISISYLDAIMGTVVKV----KTVE--G--------ISELQVPPGTQPGDVLVLAKKGAPKLNKPSIRGDHL  272 (363)
Q Consensus       207 R~G~DL~~~~~I~l~eAllG~~~~v----~tld--G--------~~~l~ip~gtq~g~~~~l~g~G~P~~~~~~~rGDL~  272 (363)
                      |++.||++++.|+|.||++|+..+|    ++++  |        .++|+||+|+++|++++++|+|+|..+. ..+||||
T Consensus       115 ~kg~di~~~v~isLee~~~G~~k~i~~~~~~~~g~G~~~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~~-~~~GDl~  193 (306)
T PRK10266        115 ARGHDIEIEVAVFLEETLTEHKRTISYNLPVYNAFGMIEQEIPKTLNVKIPAGVGNGQRIRLKGQGTPGENG-GPNGDLW  193 (306)
T ss_pred             CCCCceEEEEEEEHHHhcCCceEEEEEecccccCCCeEEEeeeEEEEEEECCCCcCCcEEEEecCCcCCCCC-CCCccEE
Confidence            4688999999999999999995544    4444  3        3578999999999999999999997543 3679999


Q ss_pred             EEEEEEcCCC
Q 017925          273 FTVKVTIPNR  282 (363)
Q Consensus       273 V~~~V~~P~~  282 (363)
                      |+|+|. |..
T Consensus       194 v~i~v~-ph~  202 (306)
T PRK10266        194 LVIHIA-PHP  202 (306)
T ss_pred             EEEEEc-CCC
Confidence            999998 654

>KOG0712 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=98.58  E-value=1e-07  Score=92.88  Aligned_cols=44  Identities=36%  Similarity=0.540  Sum_probs=40.0

Q ss_pred             eEEEEEeCCC--CCCCcEEEEccCcCCCCCCCCCccEEEEEEEEecc
Q 017925          159 KNIKVKVPPG--VSTGSILRVVGEGDAGPRGGPPGDLYVYLDVEEIP  203 (363)
Q Consensus       159 ~~l~V~IP~G--v~~G~~irl~G~G~~~~~g~~~GDL~V~i~v~~h~  203 (363)
                      +.|++.++||  +.+|++++++|+|++..... .|||||.++|+.++
T Consensus       279 r~l~~~~~pg~vi~~~~~~~v~~~gmp~~~~~-~g~lyi~~~v~fp~  324 (337)
T KOG0712|consen  279 RLLKLSSKPGEVISPGDTKRVEGEGMPIFRNP-KGDLYIKFEVKFPK  324 (337)
T ss_pred             ceEEEecCCCceeChhHEEeecCCCcccccCC-CCcEEEEEEEEcCC
Confidence            7899999999  99999999999999976544 99999999999887

>KOG0714 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=98.50  E-value=1.4e-06  Score=82.42  Aligned_cols=104  Identities=29%  Similarity=0.453  Sum_probs=91.6

Q ss_pred             eceEEEEEeCCCCCCCcEEEEccCcCCCCCCCCCccEEEEEEEEeccccccCCcceeEE--EEeceEEeecCcEEEEecc
Q 017925          157 LKKNIKVKVPPGVSTGSILRVVGEGDAGPRGGPPGDLYVYLDVEEIPGIQRDGIDLFST--ISISYLDAIMGTVVKVKTV  234 (363)
Q Consensus       157 ~~~~l~V~IP~Gv~~G~~irl~G~G~~~~~g~~~GDL~V~i~v~~h~~f~R~G~DL~~~--~~I~l~eAllG~~~~v~tl  234 (363)
                      ..+.+.+.+++++..|+.+....+|+..+. ..|-++++.+..++|..|.|.++||++.  ..|++.+|+++....++++
T Consensus       198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~p~~~~f~~~~~~~~~~~~~~~~l~~~~~~~~s~~~~~~~~~~~~~~~  276 (306)
T KOG0714|consen  198 RSRYLSISIKPGWKEGTKITFPEEGDEEPG-ILPADIEFVVDEKPHPLFSRDGNDLSYSSGYEISLKEALLGVTVFVPTL  276 (306)
T ss_pred             ccceeEEeccCCcccccceeccccccccCC-cCcceeEEEEecCCcccccCCCccceecccceeehhhhhcCcceeeecc
Confidence            357788999999999999999999987653 5678888899999999999999999999  9999999999999999999


Q ss_pred             Cce-EEEecC-CCCCCCcEEEEccCCCCC
Q 017925          235 EGI-SELQVP-PGTQPGDVLVLAKKGAPK  261 (363)
Q Consensus       235 dG~-~~l~ip-~gtq~g~~~~l~g~G~P~  261 (363)
                      ++. ..+.+. .-..++...+++++|||.
T Consensus       277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  305 (306)
T KOG0714|consen  277 DGRSYSLSINKDLIEPGEEDVIPGEGLPC  305 (306)
T ss_pred             cCccccCcccccccCCCceeeecCCCCCC
Confidence            987 345554 557899999999999985

>TIGR02642 phage_xxxx uncharacterized phage protein

Probab=98.35  E-value=3.5e-07  Score=82.42  Aligned_cols=49  Identities=31%  Similarity=0.642  Sum_probs=45.5

Q ss_pred             eecCCCCCcccEEec--eeeeecCCCcEEeeceEEEEEeCCCCCCCcEEEEc
Q 017925          129 VSVCPSCGGEGEVIS--EYCRKCSGEGRIRLKKNIKVKVPPGVSTGSILRVV  178 (363)
Q Consensus       129 ~~~C~~C~G~G~vi~--~~C~~C~G~G~v~~~~~l~V~IP~Gv~~G~~irl~  178 (363)
                      +.+|+.|+|+|++|.  ++|+.|+|.|+++.++.+.+++ .|+++|++|++.
T Consensus        99 ~~~C~~C~G~G~~i~~~~~C~~C~G~G~v~~~~~~~~k~-~g~~~g~~it~~  149 (186)
T TIGR02642        99 SCKCPRCRGTGLIQRRQRECDTCAGTGRFRPTVEDLLKS-FGVDSGAAIVLK  149 (186)
T ss_pred             CCcCCCCCCeeEEecCCCCCCCCCCccEEeeeEEEEEEe-eeccCCceeeHH
Confidence            578999999999997  7899999999999999999999 999999999875

This uncharacterized protein is found in prophage regions of Shewanella oneidensis MR-1, Vibrio vulnificus YJ016, Yersinia pseudotuberculosis IP 32953, and Aeromonas hydrophila ATCC7966. It appears to have regions of sequence similarity to phage lambda antitermination protein Q.

>TIGR03835 termin_org_DnaJ terminal organelle assembly protein TopJ

Probab=98.00  E-value=1.8e-05  Score=84.00  Aligned_cols=71  Identities=17%  Similarity=0.148  Sum_probs=58.4

Q ss_pred             CCCCcEEEEEEeehhhhhcCCeEEEEEeeeEeccCCCCCceeeCceeeeCCCCccccEEEEeeeCCCcceeeeecCCCCC
Q 017925           57 TKGEDLRYDIVLEFSESIFGAEKEFELSHLETCEVCTGTGAKMGSKMRICSTCGGRGQVMRTDQTPFGLFSQVSVCPSCG  136 (363)
Q Consensus        57 ~~g~di~~~l~ltlee~~~G~~~~i~~~~~~~C~~C~GsG~~~g~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~  136 (363)
                      ++|.|+.+.+.|+|.+|+.|+++.|.--                                                    
T Consensus       743 RdGdDL~~~v~ISL~EALLGgtIeIpTL----------------------------------------------------  770 (871)
T TIGR03835       743 IKNDGLHVAALVDPLVAYNGGIIDVFGP----------------------------------------------------  770 (871)
T ss_pred             EECCeEEEEEecCHHHHhcCCEEEeeCC----------------------------------------------------
Confidence            5689999999999999999987665321                                                    


Q ss_pred             cccEEeceeeeecCCCcEEeeceEEEEEeCCCCCCCcEEEEccCcCCCCCCCCCccEEEEEEEEe
Q 017925          137 GEGEVISEYCRKCSGEGRIRLKKNIKVKVPPGVSTGSILRVVGEGDAGPRGGPPGDLYVYLDVEE  201 (363)
Q Consensus       137 G~G~vi~~~C~~C~G~G~v~~~~~l~V~IP~Gv~~G~~irl~G~G~~~~~g~~~GDL~V~i~v~~  201 (363)
                                           ...++|+||+|+++|+++||+|+|++.. +...|||||+|.+..
T Consensus       771 ---------------------DGrVkLkIPpgTqpGqvLRIkGKGMP~~-~~~RGDLyV~f~V~~  813 (871)
T TIGR03835       771 ---------------------NKLFNVRIPGGIKVNDQVIFKDLGLTKT-KYDKGSLIVHLYYSS  813 (871)
T ss_pred             ---------------------CCCEEEeeCCCCCCCcEEEECCCCCCCC-CCCCCCEEEEEEEee
Confidence                                 1137899999999999999999999743 345799999998764

This model describes TopJ (MG_200, CbpA), a DnaJ homolog and probable assembly protein of the Mycoplasma terminal organelle. The terminal organelle is involved in both cytadherence and gliding motility.

>PF00684 DnaJ_CXXCXGXG: DnaJ central domain; InterPro: IPR001305 The hsp70 chaperone machine performs many diverse roles in the cell, including folding of nascent proteins, translocation of polypeptides across organelle membranes, coordinating responses to stress, and targeting selected proteins for degradation

Probab=97.90  E-value=9.8e-06  Score=61.08  Aligned_cols=44  Identities=32%  Similarity=0.900  Sum_probs=31.8

Q ss_pred             eeEeccCCCCCceeeC---------ceeeeCCCCccccEEEEeeeCCCcceeeeecCCCCCccc
Q 017925           85 HLETCEVCTGTGAKMG---------SKMRICSTCGGRGQVMRTDQTPFGLFSQVSVCPSCGGEG  139 (363)
Q Consensus        85 ~~~~C~~C~GsG~~~g---------~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G  139 (363)
                      ....|+.|+|+|....         ....+|+.|+|+|+++ ..          .+|+.|+|.|
T Consensus        14 ~~~~C~~C~G~G~~~~~~~~~~~~~~~~~~C~~C~G~G~~i-~~----------~~C~~C~G~g   66 (66)
T PF00684_consen   14 KPKTCPQCNGSGQVTRRQQTPGGVFQMQQTCPKCGGTGKII-EK----------DPCKTCKGSG   66 (66)
T ss_dssp             T-EE-TTSSSSSEEEEEEESSSTTEEEEEE-TTTSSSSEE--TS----------SB-SSSTTSS
T ss_pred             CCcCCcCCCCeeEEEEEEeCCCeEEEEEEECCCCcceeeEE-CC----------CCCCCCCCcC
Confidence            3468999999998753         2567899999999987 11          8999999986

DnaJ is a member of the hsp40 family of molecular chaperones, which is also called the J-protein family, the members of which regulate the activity of hsp70s. DnaJ (hsp40) binds to DnaK (hsp70) and stimulates its ATPase activity, generating the ADP-bound state of DnaK, which interacts stably with the polypeptide substrate []. Besides stimulating the ATPase activity of DnaK through its J-domain, DnaJ also associates with unfolded polypeptide chains and prevents their aggregation []. DnaJ consists of an N-terminal conserved domain (called 'J' domain) of about 70 amino acid residues, a glycine and phenylalanine-rich domain ('G/F' domain), a central cysteine rich domain (CR-type zinc finger) containing four repeats of a CXXCXGXG motif which can coordinate two zinc atom and a C-terminal domain (CTD) []. This entry represents the central cysteine-rich (CR) domain of DnaJ proteins. This central cysteine rich domain (CR-type zinc finger) has an overall V-shaped extended beta-hairpin topology and contains four repeats of the motif CXXCXGXG where X is any amino acid. The isolated cysteine rich domain folds in zinc dependent fashion. Each set of two repeats binds one unit of zinc. Although this domain has been implicated in substrate binding, no evidence of specific interaction between the isolated DnaJ cysteine rich domain and various hydrophobic peptides has been found [].; GO: 0031072 heat shock protein binding, 0051082 unfolded protein binding; PDB: 1NLT_A 2CTT_A 1EXK_A.

>COG1107 Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain [DNA replication, recombination, and repair]

Probab=97.78  E-value=1.8e-05  Score=81.19  Aligned_cols=69  Identities=30%  Similarity=0.715  Sum_probs=46.1

Q ss_pred             EeccCCCCCceeeCceeeeCCCCccccEEEEeee--------CCCcceee-eecCCCCCcccEEe-ceeeeecCCCcEEe
Q 017925           87 ETCEVCTGTGAKMGSKMRICSTCGGRGQVMRTDQ--------TPFGLFSQ-VSVCPSCGGEGEVI-SEYCRKCSGEGRIR  156 (363)
Q Consensus        87 ~~C~~C~GsG~~~g~~~~~C~~C~G~G~~~~~~~--------~~~G~~~~-~~~C~~C~G~G~vi-~~~C~~C~G~G~v~  156 (363)
                      ..|+.|+|+|...- ....|+.|+|+|..-....        -..=.|.. ..+|+.|.|+|++. -+.|+.|.|.|.+.
T Consensus         3 ~~C~~C~g~G~i~v-~~e~c~vc~gtG~~~~~d~k~~~~~~~~~~D~~~~~~~pc~~c~gkG~V~v~~~c~~c~G~gkv~   81 (715)
T COG1107           3 KKCPECGGKGKIVV-GEEECPVCHGTGFSDDFDPKGVANLSRETVDLFASFEIPCPKCRGKGTVTVYDTCPECGGTGKVL   81 (715)
T ss_pred             ccccccCCCceEee-eeeecccccccccccccChhhhhhhhhccccccccCCCCCCeeccceeEEEEeecccCCCceeEE
Confidence            46899999887654 3467999999987632211        00112233 35899999999885 47899998888643

>KOG2813 consensus Predicted molecular chaperone, contains DnaJ domain [Posttranslational modification, protein turnover, chaperones]

Probab=97.40  E-value=0.00012  Score=70.19  Aligned_cols=61  Identities=34%  Similarity=0.814  Sum_probs=40.1

Q ss_pred             eEeccCCCCCceee---Cc----------------eeeeCCCCccccEEEEeeeCCCcceeeeecCCCCCcccEEeceee
Q 017925           86 LETCEVCTGTGAKM---GS----------------KMRICSTCGGRGQVMRTDQTPFGLFSQVSVCPSCGGEGEVISEYC  146 (363)
Q Consensus        86 ~~~C~~C~GsG~~~---g~----------------~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~vi~~~C  146 (363)
                      ..+|+.|+|+|...   ++                ....|..|+|+|.               ..|++|+|+|.   .+|
T Consensus       198 ~~vc~gc~g~G~~~y~~~~~m~c~sc~G~~~~k~gt~~~C~~C~G~G~---------------~~C~tC~grG~---k~C  259 (406)
T KOG2813|consen  198 AMVCHGCSGSGSNSYGIGTPMHCMSCTGVPPPKIGTHDLCYMCHGRGI---------------KECHTCKGRGK---KPC  259 (406)
T ss_pred             ceeccCcCCCCccccccCcceecccccCCCCCCCCccchhhhccCCCc---------------ccCCcccCCCC---ccc
Confidence            56788888888421   10                2234666666664               46777777776   489


Q ss_pred             eecCCCcEEeeceEEEEE
Q 017925          147 RKCSGEGRIRLKKNIKVK  164 (363)
Q Consensus       147 ~~C~G~G~v~~~~~l~V~  164 (363)
                      .+|.|.|.+..--.+.|.
T Consensus       260 ~TC~gtgsll~~t~~vV~  277 (406)
T KOG2813|consen  260 TTCSGTGSLLNYTRIVVY  277 (406)
T ss_pred             ccccCccceeeeEEEEEE
Confidence            999999987665555444

>PLN03165 chaperone protein dnaJ-related; Provisional

Probab=96.94  E-value=0.00079  Score=55.90  Aligned_cols=52  Identities=25%  Similarity=0.590  Sum_probs=38.6

Q ss_pred             hhhhhcCCeEEEEEeeeEeccCCCCCceeeC------ceeeeCCCCccccEEEEeeeCCCcceeeeecCCCCCcccEEec
Q 017925           70 FSESIFGAEKEFELSHLETCEVCTGTGAKMG------SKMRICSTCGGRGQVMRTDQTPFGLFSQVSVCPSCGGEGEVIS  143 (363)
Q Consensus        70 lee~~~G~~~~i~~~~~~~C~~C~GsG~~~g------~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~vi~  143 (363)
                      +...+.|...       ..|..|+|+|....      ....+|+.|+|+|+               ..|+.|.|+|.+..
T Consensus        43 ~C~~C~GsG~-------~~C~~C~G~G~v~~~~~g~~q~~~~C~~C~G~Gk---------------~~C~~C~G~G~~~~  100 (111)
T PLN03165         43 PCFPCSGTGA-------QVCRFCVGSGNVTVELGGGEKEVSKCINCDGAGS---------------LTCTTCQGSGIQPR  100 (111)
T ss_pred             CCCCCCCCCC-------cCCCCCcCcCeEEEEeCCcEEEEEECCCCCCcce---------------eeCCCCCCCEEEee
Confidence            4456666554       28999999998642      13568999999996               24999999998753

>TIGR02642 phage_xxxx uncharacterized phage protein

Probab=96.43  E-value=0.002  Score=58.34  Aligned_cols=31  Identities=29%  Similarity=0.744  Sum_probs=20.5

Q ss_pred             eeeCCCCccccEEEEeeeCCCcceeeeecCCCCCcccEEec
Q 017925          103 MRICSTCGGRGQVMRTDQTPFGLFSQVSVCPSCGGEGEVIS  143 (363)
Q Consensus       103 ~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~vi~  143 (363)
                      ..+|+.|+|+|.+++..          .+|+.|+|+|++-.
T Consensus        99 ~~~C~~C~G~G~~i~~~----------~~C~~C~G~G~v~~  129 (186)
T TIGR02642        99 SCKCPRCRGTGLIQRRQ----------RECDTCAGTGRFRP  129 (186)
T ss_pred             CCcCCCCCCeeEEecCC----------CCCCCCCCccEEee
Confidence            45677777777765422          46777777777654

This uncharacterized protein is found in prophage regions of Shewanella oneidensis MR-1, Vibrio vulnificus YJ016, Yersinia pseudotuberculosis IP 32953, and Aeromonas hydrophila ATCC7966. It appears to have regions of sequence similarity to phage lambda antitermination protein Q.

>COG1107 Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain [DNA replication, recombination, and repair]

Probab=96.38  E-value=0.0025  Score=65.86  Aligned_cols=46  Identities=33%  Similarity=0.885  Sum_probs=37.0

Q ss_pred             eeeCCCCccccEEEEeeeCCCcceeeeecCCCCCcccEEec---------------------eeeeecCCCcEEeec
Q 017925          103 MRICSTCGGRGQVMRTDQTPFGLFSQVSVCPSCGGEGEVIS---------------------EYCRKCSGEGRIRLK  158 (363)
Q Consensus       103 ~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~vi~---------------------~~C~~C~G~G~v~~~  158 (363)
                      ..+|+.|+|+|++....          ..|+.|+|+|++-.                     -+|+.|+|+|.|...
T Consensus         2 ~~~C~~C~g~G~i~v~~----------e~c~vc~gtG~~~~~d~k~~~~~~~~~~D~~~~~~~pc~~c~gkG~V~v~   68 (715)
T COG1107           2 IKKCPECGGKGKIVVGE----------EECPVCHGTGFSDDFDPKGVANLSRETVDLFASFEIPCPKCRGKGTVTVY   68 (715)
T ss_pred             CccccccCCCceEeeee----------eecccccccccccccChhhhhhhhhccccccccCCCCCCeeccceeEEEE
Confidence            46899999999986543          78999999998631                     159999999988753

>KOG2813 consensus Predicted molecular chaperone, contains DnaJ domain [Posttranslational modification, protein turnover, chaperones]

Probab=94.57  E-value=0.016  Score=56.07  Aligned_cols=39  Identities=36%  Similarity=1.017  Sum_probs=31.4

Q ss_pred             eeeEeccCCCCCceeeCceeeeCCCCccccEEEEeeeCCCcceeeeecCCCCCcccEEec
Q 017925           84 SHLETCEVCTGTGAKMGSKMRICSTCGGRGQVMRTDQTPFGLFSQVSVCPSCGGEGEVIS  143 (363)
Q Consensus        84 ~~~~~C~~C~GsG~~~g~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~vi~  143 (363)
                      ....+|.-|+|+|.      ..|++|.|+|.               .+|.+|.|+|....
T Consensus       232 gt~~~C~~C~G~G~------~~C~tC~grG~---------------k~C~TC~gtgsll~  270 (406)
T KOG2813|consen  232 GTHDLCYMCHGRGI------KECHTCKGRGK---------------KPCTTCSGTGSLLN  270 (406)
T ss_pred             CccchhhhccCCCc------ccCCcccCCCC---------------cccccccCccceee
Confidence            34566777888875      57999999997               68999999999754

>KOG0715 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=93.21  E-value=0.049  Score=52.78  Aligned_cols=69  Identities=33%  Similarity=0.691  Sum_probs=47.2

Q ss_pred             cEEEEEEeehhhhhcCCeEEEEEeeeEeccCCCCCceee-----CceeeeCCCCccccEEEEeeeCCCcceeeeecCCCC
Q 017925           61 DLRYDIVLEFSESIFGAEKEFELSHLETCEVCTGTGAKM-----GSKMRICSTCGGRGQVMRTDQTPFGLFSQVSVCPSC  135 (363)
Q Consensus        61 di~~~l~ltlee~~~G~~~~i~~~~~~~C~~C~GsG~~~-----g~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C  135 (363)
                      .+.+.+ ++..++.+|.. .........|..|.|.|...     .-...+|..|++.|.+..            ..|..|
T Consensus       158 ~~~~~~-~~~~~t~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~c~~~~~~~~------------~~c~~~  223 (288)
T KOG0715|consen  158 RISFNV-LSDCETCFGSG-AEEGAKRESCKTCSGRGLVSNPKEDPFILYTCSYCLGRGLVLR------------DNCQAC  223 (288)
T ss_pred             ceEEEe-ecccccccCcC-cccccccccchhhhCcccccccccCCcceeecccccccceecc------------chHHHh
Confidence            344444 33556777766 34456678999999999322     112237999999998765            559999


Q ss_pred             CcccEEec
Q 017925          136 GGEGEVIS  143 (363)
Q Consensus       136 ~G~G~vi~  143 (363)
                      .|.|.+..
T Consensus       224 ~g~~~v~~  231 (288)
T KOG0715|consen  224 SGAGQVRR  231 (288)
T ss_pred             hcchhhhh
Confidence            99996554

>TIGR00310 ZPR1_znf ZPR1 zinc finger domain

Probab=89.30  E-value=3.7  Score=37.44  Aligned_cols=26  Identities=23%  Similarity=0.478  Sum_probs=18.6

Q ss_pred             cEEEEeccCceEEEecCCC-CCCCcEEEEcc
Q 017925          227 TVVKVKTVEGISELQVPPG-TQPGDVLVLAK  256 (363)
Q Consensus       227 ~~~~v~tldG~~~l~ip~g-tq~g~~~~l~g  256 (363)
                      +++.||-|    .|.|||| ++-|.+-.|.|
T Consensus        74 ati~IPEl----~lei~pg~~~~G~iTTVEG  100 (192)
T TIGR00310        74 ATIRIPEL----GLDIEPGPTSGGFITNLEG  100 (192)
T ss_pred             cEEEccce----EEEECCCccCCceEEeeHh
Confidence            34555554    5789999 68898888854

>TIGR00340 zpr1_rel ZPR1-related zinc finger protein

Probab=89.28  E-value=2.2  Score=37.92  Aligned_cols=26  Identities=12%  Similarity=0.454  Sum_probs=17.7

Q ss_pred             cEEEEeccCceEEEecCCCC-CCCcEEEEcc
Q 017925          227 TVVKVKTVEGISELQVPPGT-QPGDVLVLAK  256 (363)
Q Consensus       227 ~~~~v~tldG~~~l~ip~gt-q~g~~~~l~g  256 (363)
                      +++.||-|    .|.||||+ +.|.+=.|.|
T Consensus        72 a~i~IPEl----~lei~pg~~~~G~iTTVEG   98 (163)
T TIGR00340        72 ATIRIPEL----GIKIEPGPASQGYISNIEG   98 (163)
T ss_pred             cEEEccce----eEEecCCCcCCceEEehHh
Confidence            34556655    57899987 6787777744

A model ZPR1_znf (TIGR00310) has been created to describe the domain shared by this protein and ZPR1.

>KOG2824 consensus Glutaredoxin-related protein [Posttranslational modification, protein turnover, chaperones]

Probab=89.13  E-value=0.45  Score=45.40  Aligned_cols=51  Identities=33%  Similarity=0.591  Sum_probs=29.6

Q ss_pred             EeccCCCCCceeeCceeeeCCCCccccEEEEeeeCCCcceeeeecCCCCCcccEEeceeeeecC
Q 017925           87 ETCEVCTGTGAKMGSKMRICSTCGGRGQVMRTDQTPFGLFSQVSVCPSCGGEGEVISEYCRKCS  150 (363)
Q Consensus        87 ~~C~~C~GsG~~~g~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~vi~~~C~~C~  150 (363)
                      ..|..|.|.+.      ..|..|+|+=.+...    ....-...+|..|+-.|-+   +|+.|.
T Consensus       230 ~~C~~CGg~rF------lpC~~C~GS~kv~~~----~~~~~~~~rC~~CNENGLv---rCp~Cs  280 (281)
T KOG2824|consen  230 GVCESCGGARF------LPCSNCHGSCKVHEE----EEDDGGVLRCLECNENGLV---RCPVCS  280 (281)
T ss_pred             CcCCCcCCcce------EecCCCCCceeeeee----ccCCCcEEECcccCCCCce---eCCccC
Confidence            46777777655      357777777665442    1122223567777777765   455553

>KOG2824 consensus Glutaredoxin-related protein [Posttranslational modification, protein turnover, chaperones]

Probab=84.17  E-value=0.97  Score=43.22  Aligned_cols=38  Identities=32%  Similarity=0.814  Sum_probs=32.4

Q ss_pred             eeCCCCccccEEEEeeeCCCcceeeeecCCCCCcccEEec--------eeeeecCCCcEEe
Q 017925          104 RICSTCGGRGQVMRTDQTPFGLFSQVSVCPSCGGEGEVIS--------EYCRKCSGEGRIR  156 (363)
Q Consensus       104 ~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~vi~--------~~C~~C~G~G~v~  156 (363)
                      ..|..|+|.+.               .+|..|+|.-++..        .+|..|+=.|.++
T Consensus       230 ~~C~~CGg~rF---------------lpC~~C~GS~kv~~~~~~~~~~~rC~~CNENGLvr  275 (281)
T KOG2824|consen  230 GVCESCGGARF---------------LPCSNCHGSCKVHEEEEDDGGVLRCLECNENGLVR  275 (281)
T ss_pred             CcCCCcCCcce---------------EecCCCCCceeeeeeccCCCcEEECcccCCCCcee
Confidence            57999999886               58999999999886        3699999888775

>PRK14714 DNA polymerase II large subunit; Provisional

Probab=82.54  E-value=1.4  Score=50.19  Aligned_cols=66  Identities=29%  Similarity=0.571  Sum_probs=44.1

Q ss_pred             Eeehhhhh--------cCCeEEEEEeeeEeccCCCCCceeeCceeeeCCCCccccEEEEeeeCCCcceeeeecCCCCCcc
Q 017925           67 VLEFSESI--------FGAEKEFELSHLETCEVCTGTGAKMGSKMRICSTCGGRGQVMRTDQTPFGLFSQVSVCPSCGGE  138 (363)
Q Consensus        67 ~ltlee~~--------~G~~~~i~~~~~~~C~~C~GsG~~~g~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~  138 (363)
                      +=++.+|+        .+...++.+. ...|+.|.....     ...|+.|+..=..             ...|+.|+..
T Consensus       641 qR~I~kAa~~a~~~~d~~G~ieVEV~-~rkCPkCG~~t~-----~~fCP~CGs~te~-------------vy~CPsCGae  701 (1337)
T PRK14714        641 QRDVAKAAKHAPDMSDEGGVIEVEVG-RRRCPSCGTETY-----ENRCPDCGTHTEP-------------VYVCPDCGAE  701 (1337)
T ss_pred             cccHHHHHHhhhhccccCCeEEEEEE-EEECCCCCCccc-----cccCcccCCcCCC-------------ceeCccCCCc
Confidence            34678888        5555566665 578999987532     2489999866311             1589999873


Q ss_pred             cEEec-----eeeeecCCCc
Q 017925          139 GEVIS-----EYCRKCSGEG  153 (363)
Q Consensus       139 G~vi~-----~~C~~C~G~G  153 (363)
                        +..     ..|+.|...-
T Consensus       702 --v~~des~a~~CP~CGtpl  719 (1337)
T PRK14714        702 --VPPDESGRVECPRCDVEL  719 (1337)
T ss_pred             --cCCCccccccCCCCCCcc
Confidence              222     3799997654

>cd03031 GRX_GRX_like Glutaredoxin (GRX) family, GRX-like domain containing protein subfamily; composed of uncharacterized eukaryotic proteins containing a GRX-like domain having only one conserved cysteine, aligning to the C-terminal cysteine of the CXXC motif of GRXs

Probab=82.46  E-value=1.1  Score=39.16  Aligned_cols=45  Identities=31%  Similarity=0.663  Sum_probs=25.4

Q ss_pred             EeccCCCCCceeeCceeeeCCCCccccEEEEeeeCCCcceeeeecCCCCCcccE
Q 017925           87 ETCEVCTGTGAKMGSKMRICSTCGGRGQVMRTDQTPFGLFSQVSVCPSCGGEGE  140 (363)
Q Consensus        87 ~~C~~C~GsG~~~g~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~  140 (363)
                      ..|..|.|.+.      ..|..|+|+=.++......   ......|+.|+-.|-
T Consensus       100 ~~C~~Cgg~rf------v~C~~C~Gs~k~~~~~~~~---~~~~~rC~~Cnengl  144 (147)
T cd03031         100 GVCEGCGGARF------VPCSECNGSCKVFAENATA---AGGFLRCPECNENGL  144 (147)
T ss_pred             CCCCCCCCcCe------EECCCCCCcceEEeccCcc---cccEEECCCCCcccc
Confidence            45888887765      4588888877665432100   011256666665554

This subfamily is predominantly composed of plant proteins. GRX is a glutathione (GSH) dependent reductase, catalyzing the disulfide reduction of target proteins via a redox active CXXC motif using a similar dithiol mechanism employed by TRXs. GRX has preference for mixed GSH disulfide substrates, in which it uses a monothiol mechanism where only the N-terminal cysteine is required. Proteins containing only the C-terminal cysteine are generally redox inactive.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	363
1exk_A	79	Solution Structure Of The Cysteine-Rich Domain Of T		4e-11
1nlt_A	248	The Crystal Structure Of Hsp40 Ydj1 Length = 248		3e-10
2ctt_A	104	Solution Structure Of Zinc Finger Domain From Human		1e-09
3lz8_A	329	Structure Of A Putative Chaperone Dnaj From Klebsie		1e-04
2b26_A	173	The Crystal Structure Of The Protein Complex Of Yea		6e-04
1c3g_A	170	S. Cerevisiae Heat Shock Protein 40 Sis1 Length = 1		7e-04

>pdb|1EXK|A Chain A, Solution Structure Of The Cysteine-Rich Domain Of The Escherichia Coli Chaperone Protein Dnaj Length = 79

Iteration: 1
 Score = 65.5 bits (158), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 34/77 (44%), Positives = 44/77 (57%), Gaps = 4/77 (5%)
Query: 79  KEFELSHLETCEVCTGTGAKMGSKMRICSTCGGRGQVMRTDQTPFGLFSQVSVCPSCGGE 138
           KE  +  LE C+VC G+GAK G++ + C TC G GQV    Q   G F+    CP C G 
Sbjct: 4   KEIRIPTLEECDVCHGSGAKPGTQPQTCPTCHGSGQV----QMRQGFFAVQQTCPHCQGR 59
Query: 139 GEVISEYCRKCSGEGRI 155
           G +I + C KC G GR+
Sbjct: 60  GTLIKDPCNKCHGHGRV 76

>pdb|1NLT|A Chain A, The Crystal Structure Of Hsp40 Ydj1 Length = 248

Iteration: 1
 Score = 62.4 bits (150), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 60/213 (28%), Positives = 97/213 (45%), Gaps = 17/213 (7%)
Query: 58  KGEDLRYDIVLEFSESIFGAEKEFELSHLETCEVCTGTGAKMGSKMRICSTCGGRGQVMR 117
           +G+D++++I     E   G   +  L+    C+ C G G K G+ ++ C++C G+G    
Sbjct: 10  RGKDIKHEISASLEELYKGRTAKLALNKQILCKECEGRGGKKGA-VKKCTSCNGQGIKFV 68
Query: 118 TDQTPFGLFSQVSVCPSCGGEGEVIS--EYCRKCSGEGRIRLKKNIKVKVPPGVSTGSIL 175
           T Q    +    + C  C G G++I   + C+ C+G+     +K ++V V PG+  G   
Sbjct: 69  TRQMGPMIQRFQTECDVCHGTGDIIDPKDRCKSCNGKKVENERKILEVHVEPGMKDGQ-- 126
Query: 176 RVVXXXXXXXXXXXXXDLYVYLDVEEIP--GIQRDGIDLFSTISISYLDAIMGTVVKVKT 233
           R+V                V++ V E P    +RDG DL     I  L AI G    ++ 
Sbjct: 127 RIVFKGEADQAPDVIPGDVVFI-VSERPHKSFKRDGDDLVYEAEIDLLTAIAGGEFALEH 185
Query: 234 VEGISELQVPPGTQPGDVL------VLAKKGAP 260
           V G   L+V  G  PG+V+      V+  KG P
Sbjct: 186 VSG-DWLKV--GIVPGEVIAPGMRKVIEGKGMP 215

>pdb|2CTT|A Chain A, Solution Structure Of Zinc Finger Domain From Human Dnaj Subfamily A Menber 3 Length = 104

Iteration: 1
 Score = 60.8 bits (146), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 37/92 (40%), Positives = 51/92 (55%), Gaps = 4/92 (4%)
Query: 68  LEFSESIFGAEKEFELSHLETCEVCTGTGAKMGSKMRICSTCGGRGQVMRTDQTPFGLFS 127
           L F+++  G  KEF ++ ++TCE C G G + G+K++ C  CGG G  M T  T  G F 
Sbjct: 10  LTFNQAAKGVNKEFTVNIMDTCERCNGKGNEPGTKVQHCHYCGGSG--METINT--GPFV 65
Query: 128 QVSVCPSCGGEGEVISEYCRKCSGEGRIRLKK 159
             S C  CGG G +I   C  C G G+ + KK
Sbjct: 66  MRSTCRRCGGRGSIIISPCVVCRGAGQAKQKK 97

>pdb|3LZ8|A Chain A, Structure Of A Putative Chaperone Dnaj From Klebsiella Pneumoniae Subsp. Pneumoniae Mgh 78578 At 2.9 A Resolution. Length = 329

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 33/124 (26%), Positives = 56/124 (45%), Gaps = 3/124 (2%)
Query: 159 KNIKVKVPPGVSTGSILRVVXXXXXXXXXXXXXDLYVYLDVEEIPGIQRDGIDLFSTISI 218
           K + VK+P GV  G  +R+              DL++ + +   P     G +L   + +
Sbjct: 181 KTLNVKIPAGVVDGQRIRLKGQGTPGENGGPNGDLWLVIHIAPHPLFDIVGHNLEIVLPL 240
Query: 219 SYLDAIMGTVVKVKTVEGISELQVPPGTQPGDVLVLAKKGAPKLNKPSIRGDHLFTVKVT 278
           +  +A +G  V V T++    L VPPG+Q G  L +  KG   L   +  GD    +K+ 
Sbjct: 241 APWEAALGAKVTVPTLKESILLTVPPGSQAGQRLRIKGKG---LVSKTHTGDLFAVIKIV 297
Query: 279 IPNR 282
           +P +
Sbjct: 298 MPTK 301

>pdb|2B26|A Chain A, The Crystal Structure Of The Protein Complex Of Yeast Hsp40 Sis1 And Hsp70 Ssa1 Length = 173

Iteration: 1
 Score = 42.0 bits (97), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 30/127 (23%), Positives = 54/127 (42%), Gaps = 7/127 (5%)
Query: 158 KKNIKVKVPPGVSTGSILRVVXXXXXXXXXXXXXDLYVYLDVEEIPGIQRDGIDLFSTIS 217
           K  I +++ PG   G+ +                 L   +  +  P  +RDG DL  T+ 
Sbjct: 35  KTQIDIQLKPGWKAGTKITYKNQGDYNPQTGRRKTLQFVIQEKSHPNFKRDGDDLIYTLP 94
Query: 218 ISYLDAIMGTVVKVKTVEG----ISELQVPPGTQPGDVLVLAKKGAPKLNKPSIRGDHLF 273
           +S+ ++++G    ++T++G    +S +Q     QP        +G P    PS RG+ + 
Sbjct: 95  LSFKESLLGFSKTIQTIDGRTLPLSRVQ---PVQPSQTSTYPGQGMPTPKNPSQRGNLIV 151
Query: 274 TVKVTIP 280
             KV  P
Sbjct: 152 KYKVDYP 158

>pdb|1C3G|A Chain A, S. Cerevisiae Heat Shock Protein 40 Sis1 Length = 170

Iteration: 1
 Score = 41.6 bits (96), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 30/127 (23%), Positives = 54/127 (42%), Gaps = 7/127 (5%)
Query: 158 KKNIKVKVPPGVSTGSILRVVXXXXXXXXXXXXXDLYVYLDVEEIPGIQRDGIDLFSTIS 217
           K  I +++ PG   G+ +                 L   +  +  P  +RDG DL  T+ 
Sbjct: 35  KTQIDIQLKPGWKAGTKITYKNQGDYNPQTGRRKTLQFVIQEKSHPNFKRDGDDLIYTLP 94
Query: 218 ISYLDAIMGTVVKVKTVEG----ISELQVPPGTQPGDVLVLAKKGAPKLNKPSIRGDHLF 273
           +S+ ++++G    ++T++G    +S +Q     QP        +G P    PS RG+ + 
Sbjct: 95  LSFKESLLGFSKTIQTIDGRTLPLSRVQ---PVQPSQTSTYPGQGMPTPKNPSQRGNLIV 151
Query: 274 TVKVTIP 280
             KV  P
Sbjct: 152 KYKVDYP 158

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	363
1nlt_A	248	Protein YDJ1, mitochondrial protein import protein	2e-77
3lz8_A	329	Putative chaperone DNAJ; structure genomics, struc	6e-51
2ctt_A	104	DNAJ homolog subfamily A member 3; ZING finger, be	1e-38
1c3g_A	170	Heat shock protein 40; beta sheets, short helices,	1e-36
2q2g_A	180	HSP40 protein, heat shock 40 kDa protein, putative	4e-35
3agx_A	181	DNAJ homolog subfamily B member 1; chaperone; 1.85	2e-30
1exk_A	79	DNAJ protein; extended beta-hairpin, CXXCXGXG, zin	5e-27
3i38_A	109	Putative chaperone DNAJ; structural genomics, prot	1e-20
3i38_A	109	Putative chaperone DNAJ; structural genomics, prot	7e-08
1xao_A	121	YDJ1, mitochondrial protein import protein MAS5; b	1e-11

>1nlt_A Protein YDJ1, mitochondrial protein import protein MAS5; beta-strands, chaperone, heat shock, mitochondrion; 2.70A {Saccharomyces cerevisiae} SCOP: b.4.1.1 b.4.1.1 g.54.1.1 Length = 248

 Score =  237 bits (608), Expect = 2e-77
 Identities = 64/247 (25%), Positives = 104/247 (42%), Gaps = 8/247 (3%)

Query: 51  RRRSTVTKGEDLRYDIVLEFSESIFGAEKEFELSHLETCEVCTGTGAKMGSKMRICSTCG 110
           +R     +G+D++++I     E   G   +  L+    C+ C G G K G+  + C++C 
Sbjct: 3   QRPRGPQRGKDIKHEISASLEELYKGRTAKLALNKQILCKECEGRGGKKGAVKK-CTSCN 61

Query: 111 GRGQVMRTDQTPFGLFSQVSVCPSCGGEGEVISEY--CRKCSGEGRIRLKKNIKVKVPPG 168
           G+G    T Q    +    + C  C G G++I     C+ C+G+     +K ++V V PG
Sbjct: 62  GQGIKFVTRQMGPMIQRFQTECDVCHGTGDIIDPKDRCKSCNGKKVENERKILEVHVEPG 121

Query: 169 VSTGSILRVVGEGDAGPRGGPPGDLYVYLDVEEIPGIQRDGIDLFSTISISYLDAIMGTV 228
           +  G  +   GE D  P    PGD+   +        +RDG DL     I  L AI G  
Sbjct: 122 MKDGQRIVFKGEADQAP-DVIPGDVVFIVSERPHKSFKRDGDDLVYEAEIDLLTAIAGGE 180

Query: 229 VKVKTVEG-ISELQVPPG--TQPGDVLVLAKKGAPKLNKPSIRGDHLFTVKVTIPNRISA 285
             ++ V G   ++ + PG    PG   V+  KG P        G+ +    +  P     
Sbjct: 181 FALEHVSGDWLKVGIVPGEVIAPGMRKVIEGKGMPIPKYGG-YGNLIIKFTIKDPENHFT 239

Query: 286 KERELLE 292
            E  L +
Sbjct: 240 SEENLKK 246

>3lz8_A Putative chaperone DNAJ; structure genomics, structural genomics, PSI-2, protein STRU initiative; 2.90A {Klebsiella pneumoniae subsp} PDB: 2kqx_A Length = 329

 Score =  172 bits (437), Expect = 6e-51
 Identities = 61/304 (20%), Positives = 103/304 (33%), Gaps = 78/304 (25%)

Query: 2   YDQYGEAGVKSTVGGGSSAYTTNPF-----DLFETFFGPSMGGFPGMNQTGFRTRRRSTV 56
           YDQ  +       G     +  +       D+F + FG                RRR   
Sbjct: 89  YDQLWQHRNDPGFGRQRQTHEQSYSQQDFDDIFSSMFG-----------QQAHQRRRQHA 137

Query: 57  TKGEDLRYDIVLEFSESIFGAEKEFELSHLETCEVCTGTGAKMGSKMRICSTCGGRGQVM 116
            +G DL  ++ +   E++    +    +                          G  +  
Sbjct: 138 ARGHDLEIEVAVFLEETLAEQTRTISYN-------------------LPVYNVFGMIESE 178

Query: 117 RTDQTPFGLFSQVSVCPSCGGEGEVISEYCRKCSGEGRIRLKKNIKVKVPPGVSTGSILR 176
                                                     K + VK+P GV  G  +R
Sbjct: 179 TP----------------------------------------KTLNVKIPAGVVDGQRIR 198

Query: 177 VVGEGDAGPRGGPPGDLYVYLDVEEIPGIQRDGIDLFSTISISYLDAIMGTVVKVKTVEG 236
           + G+G  G  GGP GDL++ + +   P     G +L   + ++  +A +G  V V T++ 
Sbjct: 199 LKGQGTPGENGGPNGDLWLVIHIAPHPLFDIVGHNLEIVLPLAPWEAALGAKVTVPTLKE 258

Query: 237 ISELQVPPGTQPGDVLVLAKKGAPKLNKPSIRGDHLFTVKVTIPNRISAKERELLEELAS 296
              L VPPG+Q G  L +  KG       +  GD    +K+ +P +   K REL ++LA+
Sbjct: 259 SILLTVPPGSQAGQRLRIKGKGLV---SKTHTGDLFAVIKIVMPTKPDEKARELWQQLAA 315

Query: 297 LRNT 300
              +
Sbjct: 316 AEAS 319

>2ctt_A DNAJ homolog subfamily A member 3; ZING finger, beta-hairpin, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 104

 Score =  132 bits (335), Expect = 1e-38
 Identities = 35/106 (33%), Positives = 51/106 (48%), Gaps = 4/106 (3%)

Query: 59  GEDLRYDIVLEFSESIFGAEKEFELSHLETCEVCTGTGAKMGSKMRICSTCGGRGQVMRT 118
           G      + L F+++  G  KEF ++ ++TCE C G G + G+K++ C  CGG G     
Sbjct: 1   GSSGSSGMELTFNQAAKGVNKEFTVNIMDTCERCNGKGNEPGTKVQHCHYCGGSGME-TI 59

Query: 119 DQTPFGLFSQVSVCPSCGGEGEVISEYCRKCSGEGRIRLKKNIKVK 164
           +    G F   S C  CGG G +I   C  C G G+ + KK     
Sbjct: 60  NT---GPFVMRSTCRRCGGRGSIIISPCVVCRGAGQAKQKKRSGPS 102

>1c3g_A Heat shock protein 40; beta sheets, short helices, chaperone; 2.70A {Saccharomyces cerevisiae} SCOP: b.4.1.1 b.4.1.1 PDB: 2b26_A Length = 170

 Score =  129 bits (327), Expect = 1e-36
 Identities = 34/146 (23%), Positives = 64/146 (43%), Gaps = 1/146 (0%)

Query: 148 KCSGEGRIRLKKNIKVKVPPGVSTGSILRVVGEGDAGPRGGPPGDLYVYLDVEEIPGIQR 207
              G      K  I +++ PG   G+ +    +GD  P+ G    L   +  +  P  +R
Sbjct: 25  GRKGPHGASEKTQIDIQLKPGWKAGTKITYKNQGDYNPQTGRRKTLQFVIQEKSHPNFKR 84

Query: 208 DGIDLFSTISISYLDAIMGTVVKVKTVEG-ISELQVPPGTQPGDVLVLAKKGAPKLNKPS 266
           DG DL  T+ +S+ ++++G    ++T++G    L      QP        +G P    PS
Sbjct: 85  DGDDLIYTLPLSFKESLLGFSKTIQTIDGRTLPLSRVQPVQPSQTSTYPGQGMPTPKNPS 144

Query: 267 IRGDHLFTVKVTIPNRISAKERELLE 292
            RG+ +   KV  P  ++  ++  ++
Sbjct: 145 QRGNLIVKYKVDYPISLNDAQKRAID 170

>2q2g_A HSP40 protein, heat shock 40 kDa protein, putative (fragment); malaria, structural genomics, structural genomics consortium, SGC; 1.90A {Cryptosporidium parvum iowa II} Length = 180

 Score =  126 bits (318), Expect = 4e-35
 Identities = 35/161 (21%), Positives = 72/161 (44%), Gaps = 1/161 (0%)

Query: 135 CGGEGEVISEYCRKCSGEGRIRLKKNIKVKVPPGVSTGSILRVVGEGDAGPRGGPPGDLY 194
             G+ + I    ++         +  ++V++ PG   G+ L   GEGD    G  PGDL 
Sbjct: 18  YLGKRKKIKVTRKRFIEHKVRNEENIVEVEIKPGWKDGTKLTYSGEGDQESPGTSPGDLV 77

Query: 195 VYLDVEEIPGIQRDGIDLFSTISISYLDAIMGTVVKVKTVEG-ISELQVPPGTQPGDVLV 253
           + +  +  P   RD   L   ++I  + A+ G    V T++    ++ +     P    +
Sbjct: 78  LIIQTKTHPRFTRDDCHLIMKVTIPLVRALTGFTCPVTTLDNRNLQIPIKEIVNPKTRKI 137

Query: 254 LAKKGAPKLNKPSIRGDHLFTVKVTIPNRISAKERELLEEL 294
           +  +G P  N+P  +GD +    +  P  ++ ++++L++E 
Sbjct: 138 VPNEGMPIKNQPGQKGDLILEFDICFPKSLTPEQKKLIKEA 178

>3agx_A DNAJ homolog subfamily B member 1; chaperone; 1.85A {Homo sapiens} PDB: 3agy_A 3agz_A 2qld_A Length = 181

 Score =  113 bits (285), Expect = 2e-30
 Identities = 42/166 (25%), Positives = 68/166 (40%), Gaps = 5/166 (3%)

Query: 131 VCPSCGGEGEVISEYCRKCSGEGRIRLKKNIKVKVPPGVSTGSILRVVGEGDAGPRGGPP 190
           +   C  + + IS       G+      K + ++V  G   G+ +    EGD       P
Sbjct: 16  IYSGCTKKMK-ISHKRLNPDGKSIRNEDKILTIEVKKGWKEGTKITFPKEGDQTS-NNIP 73

Query: 191 GDLYVYLDVEEIPGIQRDGIDLFSTISISYLDAIMGTVVKVKTVEGISELQVPPG--TQP 248
            D+   L  +     +RDG D+     IS  +A+ G  V V T++G   + V      +P
Sbjct: 74  ADIVFVLKDKPHNIFKRDGSDVIYPARISLREALCGCTVNVPTLDG-RTIPVVFKDVIRP 132

Query: 249 GDVLVLAKKGAPKLNKPSIRGDHLFTVKVTIPNRISAKERELLEEL 294
           G    +  +G P    P  RGD +   +V  P RI    R +LE++
Sbjct: 133 GMRRKVPGEGLPLPKTPEKRGDLIIEFEVIFPERIPQTSRTVLEQV 178

>1exk_A DNAJ protein; extended beta-hairpin, CXXCXGXG, zinc-binding motif, chaperone; NMR {Escherichia coli} SCOP: g.54.1.1 Length = 79

 Score =  101 bits (253), Expect = 5e-27
 Identities = 35/81 (43%), Positives = 46/81 (56%), Gaps = 4/81 (4%)

Query: 76  GAEKEFELSHLETCEVCTGTGAKMGSKMRICSTCGGRGQVMRTDQTPFGLFSQVSVCPSC 135
           G  KE  +  LE C+VC G+GAK G++ + C TC G GQV +  Q   G F+    CP C
Sbjct: 1   GVTKEIRIPTLEECDVCHGSGAKPGTQPQTCPTCHGSGQV-QMRQ---GFFAVQQTCPHC 56

Query: 136 GGEGEVISEYCRKCSGEGRIR 156
            G G +I + C KC G GR+ 
Sbjct: 57  QGRGTLIKDPCNKCHGHGRVE 77

>3i38_A Putative chaperone DNAJ; structural genomics, protein structure initiative, midwest center for structural genomics, MCSG; 2.30A {Klebsiella pneumoniae subsp} Length = 109

 Score = 84.9 bits (211), Expect = 1e-20
 Identities = 27/95 (28%), Positives = 46/95 (48%), Gaps = 3/95 (3%)

Query: 206 QRDGIDLFSTISISYLDAIMGTVVKVKTVEGISELQVPPGTQPGDVLVLAKKGAPKLNKP 265
              G +L   + ++  +A +G  V V T++    L VPPG+Q G  L +  KG       
Sbjct: 8   DIVGHNLEIVLPLAPWEAALGAKVTVPTLKESILLTVPPGSQAGQRLRIKGKGLV---SK 64

Query: 266 SIRGDHLFTVKVTIPNRISAKERELLEELASLRNT 300
           +  GD    +K+ +P +   K REL ++LA+   +
Sbjct: 65  THTGDLFAVIKIVMPTKPDEKARELWQQLAAAEAS 99

>3i38_A Putative chaperone DNAJ; structural genomics, protein structure initiative, midwest center for structural genomics, MCSG; 2.30A {Klebsiella pneumoniae subsp} Length = 109

 Score = 49.1 bits (118), Expect = 7e-08
 Identities = 13/40 (32%), Positives = 19/40 (47%), Gaps = 2/40 (5%)

Query: 161 IKVKVPPGVSTGSILRVVGEGDAGPRGGPPGDLYVYLDVE 200
           I + VPPG   G  LR+ G+G         GDL+  + + 
Sbjct: 40  ILLTVPPGSQAGQRLRIKGKG--LVSKTHTGDLFAVIKIV 77

>1xao_A YDJ1, mitochondrial protein import protein MAS5; beta sheets, chaperone; 2.07A {Saccharomyces cerevisiae} Length = 121

 Score = 60.3 bits (147), Expect = 1e-11
 Identities = 26/94 (27%), Positives = 39/94 (41%), Gaps = 6/94 (6%)

Query: 206 QRDGIDLFSTISISYLDAIMGTVVKVKTVEG-ISELQVPPG--TQPGDVLVLAKKGAPKL 262
           +RDG DL     I  L AI G    ++ V G   ++ + PG    PG   V+  KG P  
Sbjct: 3   KRDGDDLVYEAEIDLLTAIAGGEFALEHVSGDWLKVGIVPGEVIAPGMRKVIEGKGMPIP 62

Query: 263 NKPSIRGDHLFTVKVTIPNR--ISAKERELLEEL 294
                 G+ +    +  P     S +  + LEE+
Sbjct: 63  KYGG-YGNLIIKFTIKFPENHFTSEENLKKLEEI 95

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	363
1nlt_A	248	Protein YDJ1, mitochondrial protein import protein	100.0
3agx_A	181	DNAJ homolog subfamily B member 1; chaperone; 1.85	100.0
3lz8_A	329	Putative chaperone DNAJ; structure genomics, struc	100.0
2q2g_A	180	HSP40 protein, heat shock 40 kDa protein, putative	100.0
1c3g_A	170	Heat shock protein 40; beta sheets, short helices,	100.0
3i38_A	109	Putative chaperone DNAJ; structural genomics, prot	99.95
1xao_A	121	YDJ1, mitochondrial protein import protein MAS5; b	99.93
2ctt_A	104	DNAJ homolog subfamily A member 3; ZING finger, be	99.9
1exk_A	79	DNAJ protein; extended beta-hairpin, CXXCXGXG, zin	99.64
1nlt_A	248	Protein YDJ1, mitochondrial protein import protein	99.42
3i38_A	109	Putative chaperone DNAJ; structural genomics, prot	99.12
1xao_A	121	YDJ1, mitochondrial protein import protein MAS5; b	99.09
2q2g_A	180	HSP40 protein, heat shock 40 kDa protein, putative	98.79
3agx_A	181	DNAJ homolog subfamily B member 1; chaperone; 1.85	98.79
1c3g_A	170	Heat shock protein 40; beta sheets, short helices,	98.73
3lz8_A	329	Putative chaperone DNAJ; structure genomics, struc	98.56
3pmq_A	669	Decaheme cytochrome C MTRF; greek KEY, C type cyto	98.16
3lcz_A	53	YCZA, inhibitor of trap, regulated by T-box (Trp)	97.96
2ctt_A	104	DNAJ homolog subfamily A member 3; ZING finger, be	97.87
1exk_A	79	DNAJ protein; extended beta-hairpin, CXXCXGXG, zin	97.86
2bx9_A	53	Anti-trap, AT, tryptophan RNA-binding attenuator p	97.85
2bx9_A	53	Anti-trap, AT, tryptophan RNA-binding attenuator p	97.31
3lcz_A	53	YCZA, inhibitor of trap, regulated by T-box (Trp)	97.2
1bq0_A	103	DNAJ, HSP40; chaperone, heat shock, protein foldin	93.76
2qkd_A	404	Zinc finger protein ZPR1; helical hairpins, beta h	84.86
2qkd_A	404	Zinc finger protein ZPR1; helical hairpins, beta h	84.31

>1nlt_A Protein YDJ1, mitochondrial protein import protein MAS5; beta-strands, chaperone, heat shock, mitochondrion; 2.70A {Saccharomyces cerevisiae} SCOP: b.4.1.1 b.4.1.1 g.54.1.1

Probab=100.00  E-value=2.3e-65  Score=480.42  Aligned_cols=234  Identities=27%  Similarity=0.505  Sum_probs=210.3

Q ss_pred             CCCCCCcEEEEEEeehhhhhcCCeEEEEEeeeEeccCCCCCceeeCceeeeCCCCccccEEEEeeeCCCccee-eeecCC
Q 017925           55 TVTKGEDLRYDIVLEFSESIFGAEKEFELSHLETCEVCTGTGAKMGSKMRICSTCGGRGQVMRTDQTPFGLFS-QVSVCP  133 (363)
Q Consensus        55 ~~~~g~di~~~l~ltlee~~~G~~~~i~~~~~~~C~~C~GsG~~~g~~~~~C~~C~G~G~~~~~~~~~~G~~~-~~~~C~  133 (363)
                      ++++|+|++++|+|||+|||+|++++|.+++.+.|+.|+|+|+++++ ..+|+.|+|+|++++.+++++ +++ ++++|+
T Consensus         7 ~~~~g~d~~~~l~vslee~~~G~~k~i~~~r~~~C~~C~G~G~~~g~-~~~C~~C~G~G~~~~~~~~g~-~~~~~~~~C~   84 (248)
T 1nlt_A            7 GPQRGKDIKHEISASLEELYKGRTAKLALNKQILCKECEGRGGKKGA-VKKCTSCNGQGIKFVTRQMGP-MIQRFQTECD   84 (248)
T ss_dssp             -CCBCCCEEEEEEECTTHHHHCEEEEEEEEEEEECTTTTTCSBSTTT-CCCCTTSSSSSCEEEEEESSS-EEEEEECSCT
T ss_pred             CCCCCCCEEEEEEecHHHhcCCceEEEEeeEEEeCCCCcCccCCCCC-CccCCCCCCCcEEEEEEecCc-eEEEEEEcCC
Confidence            34689999999999999999999999999999999999999999998 499999999999988888777 554 458999


Q ss_pred             CCCcccEEe--ceeeeecCCCcEEeeceEEEEEeCCCCCCCcEEEEccCcCCCCCCCCCccEEEEEEEEeccccccCCcc
Q 017925          134 SCGGEGEVI--SEYCRKCSGEGRIRLKKNIKVKVPPGVSTGSILRVVGEGDAGPRGGPPGDLYVYLDVEEIPGIQRDGID  211 (363)
Q Consensus       134 ~C~G~G~vi--~~~C~~C~G~G~v~~~~~l~V~IP~Gv~~G~~irl~G~G~~~~~g~~~GDL~V~i~v~~h~~f~R~G~D  211 (363)
                      .|+|+|++|  +++|+.|+|.|++++.++|+|+|||||++|++|+|+|+|++++ ++++|||||+|++++|+.|+|+|+|
T Consensus        85 ~C~G~G~~i~~~~~C~~C~G~g~~~~~~~l~V~Ip~G~~~G~~ir~~g~G~~~~-~g~~GDl~v~i~v~~h~~F~R~G~D  163 (248)
T 1nlt_A           85 VCHGTGDIIDPKDRCKSCNGKKVENERKILEVHVEPGMKDGQRIVFKGEADQAP-DVIPGDVVFIVSERPHKSFKRDGDD  163 (248)
T ss_dssp             TCSSSSSCCCTTSBCSSSTTSCEEEEEEEEEEEECTTCCTTCEEEETTCSCCCT-TCBCCCEEEEEEECCCSSCEEETTE
T ss_pred             CCCCcCEEeccCCCCcccCCCceEeeeEEEEEEECCCccCCCEEEEeeeecCCC-CCCcceEEEEEEEecCccceeeCCE
Confidence            999999999  8999999999999999999999999999999999999999976 5699999999999999999999999


Q ss_pred             eeEEEEeceEEeecCcEEEEeccCce-EEEecCCC--CCCCcEEEEccCCCCCCCCCCCCccEEEEEEEEcCCC--CCHH
Q 017925          212 LFSTISISYLDAIMGTVVKVKTVEGI-SELQVPPG--TQPGDVLVLAKKGAPKLNKPSIRGDHLFTVKVTIPNR--ISAK  286 (363)
Q Consensus       212 L~~~~~I~l~eAllG~~~~v~tldG~-~~l~ip~g--tq~g~~~~l~g~G~P~~~~~~~rGDL~V~~~V~~P~~--l~~~  286 (363)
                      ||++++|+|+|||||++++|+||||+ +.|+||||  ||||++++|+|+|||..+.+ .+|||||+|+|+||++  ||++
T Consensus       164 L~~~~~Isl~eAllG~~i~v~tldG~~~~i~ip~g~vt~~g~~~rl~g~Gmp~~~~~-~~GDL~V~~~V~~P~~~~Ls~~  242 (248)
T 1nlt_A          164 LVYEAEIDLLTAIAGGEFALEHVSGDWLKVGIVPGEVIAPGMRKVIEGKGMPIPKYG-GYGNLIIKFTIKDPENHFTSEE  242 (248)
T ss_dssp             EEEEEEEEHHHHHHCBCCEEECSSSCEEECCBCTTTTCSTTCEEEETTCSCBCSSSC-SBCCEEEEEEEECCC-------
T ss_pred             EEEEEEeCHHHHhcCCEEEEeCCCCCEEEEEeCCCCeeCCCeEEEEcCCCCccCCCC-CcCCEEEEEEEECCCCCCCCHH
Confidence            99999999999999999999999996 89999999  99999999999999987665 6899999999999999  9999


Q ss_pred             HHHHHH
Q 017925          287 ERELLE  292 (363)
Q Consensus       287 q~~ll~  292 (363)
                      |+++|+
T Consensus       243 q~~~l~  248 (248)
T 1nlt_A          243 NLKKLE  248 (248)
T ss_dssp             ------
T ss_pred             HHHhhC
Confidence            999985

>3agx_A DNAJ homolog subfamily B member 1; chaperone; 1.85A {Homo sapiens} PDB: 3agy_A 3agz_A 2qld_A

Probab=100.00  E-value=3.2e-49  Score=354.32  Aligned_cols=177  Identities=25%  Similarity=0.369  Sum_probs=159.4

Q ss_pred             CCcEEEEEEeehhhhhcCCeEEEEEeeeEeccCCCCCceeeCceeeeCCCCccccEEEEeeeCCCcceeeeecCCCCCcc
Q 017925           59 GEDLRYDIVLEFSESIFGAEKEFELSHLETCEVCTGTGAKMGSKMRICSTCGGRGQVMRTDQTPFGLFSQVSVCPSCGGE  138 (363)
Q Consensus        59 g~di~~~l~ltlee~~~G~~~~i~~~~~~~C~~C~GsG~~~g~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~  138 (363)
                      ++|++++|+|||+|||+|+++++.+.+                                                     
T Consensus         2 ~~d~~~~l~islee~~~G~~k~i~i~~-----------------------------------------------------   28 (181)
T 3agx_A            2 DPPVTHDLRVSLEEIYSGCTKKMKISH-----------------------------------------------------   28 (181)
T ss_dssp             ----CEEEEECHHHHHHCEEEEEEEEE-----------------------------------------------------
T ss_pred             CCCEEEEEEEEHHHhcCCcEEEEEEec-----------------------------------------------------
Confidence            468999999999999999999987642                                                     


Q ss_pred             cEEeceeeeecCCCcEEeeceEEEEEeCCCCCCCcEEEEccCcCCCCCCCCCccEEEEEEEEeccccccCCcceeEEEEe
Q 017925          139 GEVISEYCRKCSGEGRIRLKKNIKVKVPPGVSTGSILRVVGEGDAGPRGGPPGDLYVYLDVEEIPGIQRDGIDLFSTISI  218 (363)
Q Consensus       139 G~vi~~~C~~C~G~G~v~~~~~l~V~IP~Gv~~G~~irl~G~G~~~~~g~~~GDL~V~i~v~~h~~f~R~G~DL~~~~~I  218 (363)
                            +|..|+|.|++++.++++|+||||+++|++|+|+|+|++++ ++++|||||+|++++|+.|+|+|+|||++++|
T Consensus        29 ------~c~~c~G~g~~~~~~~l~V~Ip~G~~~G~~ir~~G~G~~~~-~g~~GDl~v~i~~~~h~~F~R~G~DL~~~~~I  101 (181)
T 3agx_A           29 ------KRLNPDGKSIRNEDKILTIEVKKGWKEGTKITFPKEGDQTS-NNIPADIVFVLKDKPHNIFKRDGSDVIYPARI  101 (181)
T ss_dssp             ------EEECTTSSCEEEEEEEEEEEECTTCCTTCEEEETTCSCCCS-SSCCCCEEEEEEECCCSSCEEETTEEEEEEEE
T ss_pred             ------ccCCCCCceEEEEeEEEEEEECCCccCCcEEEEeeccccCC-CCCcccEEEEEEEeccccceeeCCcEEEEEEc
Confidence                  24445555666778999999999999999999999999987 67999999999999999999999999999999


Q ss_pred             ceEEeecCcEEEEeccCce-EEEecCCCCCCCcEEEEccCCCCCCCCCCCCccEEEEEEEEcCCCCCHHHHHHHHHHH
Q 017925          219 SYLDAIMGTVVKVKTVEGI-SELQVPPGTQPGDVLVLAKKGAPKLNKPSIRGDHLFTVKVTIPNRISAKERELLEELA  295 (363)
Q Consensus       219 ~l~eAllG~~~~v~tldG~-~~l~ip~gtq~g~~~~l~g~G~P~~~~~~~rGDL~V~~~V~~P~~l~~~q~~ll~~l~  295 (363)
                      +|+|||||++++|+||||+ +.|+||++||||++++|+|+|||..+.++.+|||||+|+|++|++||++|+++|++|+
T Consensus       102 sl~eAllG~~i~v~tldG~~~~i~i~~~t~~g~~~rl~g~Gmp~~~~~~~~GDL~V~~~V~~P~~ls~~q~~~l~~~~  179 (181)
T 3agx_A          102 SLREALCGCTVNVPTLDGRTIPVVFKDVIRPGMRRKVPGEGLPLPKTPEKRGDLIIEFEVIFPERIPQTSRTVLEQVL  179 (181)
T ss_dssp             EHHHHHHCEEEEEECTTSCEEEEEECSCCCTTCEEEETTCSCBCSSSTTSBCCEEEEEEEECCSCCCHHHHHHHHHHS
T ss_pred             CHHHHhCCCEEEeECCCCCEEEEECCCccCCCcEEEECCcCCCcCCCCCCcCCEEEEEEEECCCCCCHHHHHHHHHhc
Confidence            9999999999999999996 8899999999999999999999987655578999999999999999999999999996

>3lz8_A Putative chaperone DNAJ; structure genomics, structural genomics, PSI-2, protein STRU initiative; 2.90A {Klebsiella pneumoniae subsp} PDB: 2kqx_A

Probab=100.00  E-value=1.9e-49  Score=385.78  Aligned_cols=203  Identities=28%  Similarity=0.483  Sum_probs=162.1

Q ss_pred             ChhhhhhhhhCCCCCCCCCCCCCCCCCCCCCCCCCCCcEEEEEEeehhhhhcCCeEEEEEeeeEeccCCCCCceeeCcee
Q 017925           24 NPFDLFETFFGPSMGGFPGMNQTGFRTRRRSTVTKGEDLRYDIVLEFSESIFGAEKEFELSHLETCEVCTGTGAKMGSKM  103 (363)
Q Consensus        24 ~~~diF~~fFG~~~gg~~~~~~~g~~~~~~~~~~~g~di~~~l~ltlee~~~G~~~~i~~~~~~~C~~C~GsG~~~g~~~  103 (363)
                      ++.|||++|||++  +++        + +++++++|+|+.++|.|||+|+|+|++++|.+++.+.|              
T Consensus       116 ~f~diF~~~Fg~~--g~~--------~-~~~~~~~g~Dl~~~l~vsleea~~G~~k~i~i~~~v~~--------------  170 (329)
T 3lz8_A          116 DFDDIFSSMFGQQ--AHQ--------R-RRQHAARGHDLEIEVAVFLEETLAEQTRTISYNLPVYN--------------  170 (329)
T ss_dssp             --------------------------------CCCCCCEEEEECCCTTGGGSCEEEEEEEEEEECC--------------
T ss_pred             chhhhhHhhhcCc--CCC--------C-CCCCcCCCCCEEEEEecchhhhhhccceEEEEEEEeec--------------
Confidence            5678999998731  110        1 11224689999999999999999999999999875422              


Q ss_pred             eeCCCCccccEEEEeeeCCCcceeeeecCCCCCcccEEeceeeeecCCCcEEeeceEEEEEeCCCCCCCcEEEEccCcCC
Q 017925          104 RICSTCGGRGQVMRTDQTPFGLFSQVSVCPSCGGEGEVISEYCRKCSGEGRIRLKKNIKVKVPPGVSTGSILRVVGEGDA  183 (363)
Q Consensus       104 ~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~vi~~~C~~C~G~G~v~~~~~l~V~IP~Gv~~G~~irl~G~G~~  183 (363)
                             +.|++                                      .+...++|+|+||||+++|++|+|+|+|++
T Consensus       171 -------g~G~v--------------------------------------~~~~~~~l~V~IP~Gv~~G~~Irl~G~G~~  205 (329)
T 3lz8_A          171 -------VFGMI--------------------------------------ESETPKTLNVKIPAGVVDGQRIRLKGQGTP  205 (329)
T ss_dssp             -------SCC-C--------------------------------------CEEEEEEEEEEECTTCCTTCEEEESSCSCC
T ss_pred             -------CCeEE--------------------------------------EEecceEEEEeCCCCCCCCCEEEEcccccC
Confidence                   12221                                      123356899999999999999999999999


Q ss_pred             CCCCCCCccEEEEEEEEeccccccCCcceeEEEEeceEEeecCcEEEEeccCceEEEecCCCCCCCcEEEEccCCCCCCC
Q 017925          184 GPRGGPPGDLYVYLDVEEIPGIQRDGIDLFSTISISYLDAIMGTVVKVKTVEGISELQVPPGTQPGDVLVLAKKGAPKLN  263 (363)
Q Consensus       184 ~~~g~~~GDL~V~i~v~~h~~f~R~G~DL~~~~~I~l~eAllG~~~~v~tldG~~~l~ip~gtq~g~~~~l~g~G~P~~~  263 (363)
                      ++.++++|||||+|+|++|+.|+|+|+||+++++|+|+|||||++++|+||||++.|+||+|||||++++|+|+|||.. 
T Consensus       206 g~~gg~~GDL~v~I~v~~h~~F~R~G~DL~~~~~Isl~eAllG~~v~VptLdG~v~l~ip~gt~~g~~~rl~G~GmP~~-  284 (329)
T 3lz8_A          206 GENGGPNGDLWLVIHIAPHPLFDIVGHNLEIVLPLAPWEAALGAKVTVPTLKESILLTVPPGSQAGQRLRIKGKGLVSK-  284 (329)
T ss_dssp             C---CCCCCEEEEECCCCCSSCEEETTEEEEEEEECHHHHHHCEEEEECCSSSCEEEEECTTCCTTCEEEETTCSCBCS-
T ss_pred             CCCCCCCCcEEEEEEEecCCccEEcCCcEEEEEECCHHHHcCCCeEEEECCCCCEEEEECCCCCCCCEEEEcCCCCCCC-
Confidence            8888899999999999999999999999999999999999999999999999999999999999999999999999975 


Q ss_pred             CCCCCccEEEEEEEEcCCCCCHHHHHHHHHHHh-hcC
Q 017925          264 KPSIRGDHLFTVKVTIPNRISAKERELLEELAS-LRN  299 (363)
Q Consensus       264 ~~~~rGDL~V~~~V~~P~~l~~~q~~ll~~l~~-~~~  299 (363)
                        ..||||||+|+|+||++||++|+++|++|++ ...
T Consensus       285 --~~rGDL~v~~~V~~P~~l~~~q~~~l~~~~~~~~~  319 (329)
T 3lz8_A          285 --THTGDLFAVIKIVMPTKPDEKARELWQQLAAAEAS  319 (329)
T ss_dssp             --SCBCCEEEEEEECCCSSCCHHHHHHHHHHHHHTTT
T ss_pred             --CCCCCEEEEEEEECCCCCCHHHHHHHHHHHhhccC
Confidence              3689999999999999999999999999998 443

>2q2g_A HSP40 protein, heat shock 40 kDa protein, putative (fragment); malaria, structural genomics, structural genomics consortium, SGC; 1.90A {Cryptosporidium parvum iowa II}

Probab=100.00  E-value=4e-48  Score=346.92  Aligned_cols=177  Identities=21%  Similarity=0.419  Sum_probs=163.5

Q ss_pred             CCCcEEEEEEeehhhhhcCCeEEEEEeeeEeccCCCCCceeeCceeeeCCCCccccEEEEeeeCCCcceeeeecCCCCCc
Q 017925           58 KGEDLRYDIVLEFSESIFGAEKEFELSHLETCEVCTGTGAKMGSKMRICSTCGGRGQVMRTDQTPFGLFSQVSVCPSCGG  137 (363)
Q Consensus        58 ~g~di~~~l~ltlee~~~G~~~~i~~~~~~~C~~C~GsG~~~g~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G  137 (363)
                      +++|++++|+|||+|||+|+++++.+.+.+.|..                                              
T Consensus         2 ~g~d~~~~l~islee~~~G~~k~i~~~~~~~c~~----------------------------------------------   35 (180)
T 2q2g_A            2 APRSHEVPLLVTLEELYLGKRKKIKVTRKRFIEH----------------------------------------------   35 (180)
T ss_dssp             --CEEEEEEEECHHHHHHCEEEEEEEEEEEEETT----------------------------------------------
T ss_pred             CCCCEEEEEEeeHHHhcCCcEEEEEEeEEEecCC----------------------------------------------
Confidence            4789999999999999999999999999887741                                              


Q ss_pred             ccEEeceeeeecCCCcEEeeceEEEEEeCCCCCCCcEEEEccCcCCCCCCCCCccEEEEEEEEeccccccCCcceeEEEE
Q 017925          138 EGEVISEYCRKCSGEGRIRLKKNIKVKVPPGVSTGSILRVVGEGDAGPRGGPPGDLYVYLDVEEIPGIQRDGIDLFSTIS  217 (363)
Q Consensus       138 ~G~vi~~~C~~C~G~G~v~~~~~l~V~IP~Gv~~G~~irl~G~G~~~~~g~~~GDL~V~i~v~~h~~f~R~G~DL~~~~~  217 (363)
                                     |++++.++++|+||||+++|++|+|+|+|+++..++++|||||+|++++|+.|+|+|+|||++++
T Consensus        36 ---------------g~~~~~~~l~V~Ip~G~~~G~~ir~~g~G~~g~~gg~~GDl~v~i~~~~h~~F~R~G~DL~~~~~  100 (180)
T 2q2g_A           36 ---------------KVRNEENIVEVEIKPGWKDGTKLTYSGEGDQESPGTSPGDLVLIIQTKTHPRFTRDDCHLIMKVT  100 (180)
T ss_dssp             ---------------EEEEEEEEEEEEECTTCCTTCEEEETTCSCCSSTTSCCCEEEEEEEECCCSSCEEETTEEEEEEE
T ss_pred             ---------------ceEEeeEEEEEEECCCCcCCcEEEEeeccCCCCCCCccccEEEEEEEEecccEEEcCCEEEEEEE
Confidence                           33456789999999999999999999999996568899999999999999999999999999999


Q ss_pred             eceEEeecCcEEEEeccCce-EEEecCCCCCCCcEEEEccCCCCCCCCCCCCccEEEEEEEEcCCCCCHHHHHHHHHHH
Q 017925          218 ISYLDAIMGTVVKVKTVEGI-SELQVPPGTQPGDVLVLAKKGAPKLNKPSIRGDHLFTVKVTIPNRISAKERELLEELA  295 (363)
Q Consensus       218 I~l~eAllG~~~~v~tldG~-~~l~ip~gtq~g~~~~l~g~G~P~~~~~~~rGDL~V~~~V~~P~~l~~~q~~ll~~l~  295 (363)
                      |+|+|||||++++|+||||+ +.|++|++||||++++|+|+|||..+.++.+|||||+|+|++|++||++|+++|++|+
T Consensus       101 Isl~eAllG~~i~v~tldG~~v~i~ip~~t~~g~~~rl~g~Gmp~~~~~~~~GDL~V~~~V~~P~~Ls~~q~~~l~~~~  179 (180)
T 2q2g_A          101 IPLVRALTGFTCPVTTLDNRNLQIPIKEIVNPKTRKIVPNEGMPIKNQPGQKGDLILEFDICFPKSLTPEQKKLIKEAL  179 (180)
T ss_dssp             EEHHHHHHCEEEEEECTTCCEEEEEECSCCCTTCEEEETTCSCBCSSSTTCBCCEEEEEEEECCSCCCHHHHHHHHHHC
T ss_pred             cCHHHHhCCCEEEeeCCCCCEEEEECCCccCCCEEEEECCcCCCcCCCCCCcCCEEEEEEEECCCCCCHHHHHHHHHhc
Confidence            99999999999999999996 8899999999999999999999987665678999999999999999999999999986

>1c3g_A Heat shock protein 40; beta sheets, short helices, chaperone; 2.70A {Saccharomyces cerevisiae} SCOP: b.4.1.1 b.4.1.1 PDB: 2b26_A

Probab=100.00  E-value=1.6e-45  Score=327.24  Aligned_cols=169  Identities=22%  Similarity=0.449  Sum_probs=155.1

Q ss_pred             CcEEEEEEeehhhhhcCCeEEEEEeeeEeccCCCCCceeeCceeeeCCCCccccEEEEeeeCCCcceeeeecCCCCCccc
Q 017925           60 EDLRYDIVLEFSESIFGAEKEFELSHLETCEVCTGTGAKMGSKMRICSTCGGRGQVMRTDQTPFGLFSQVSVCPSCGGEG  139 (363)
Q Consensus        60 ~di~~~l~ltlee~~~G~~~~i~~~~~~~C~~C~GsG~~~g~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G  139 (363)
                      +|++++|+|||+|||+|+++++++.+..    +                                               
T Consensus         1 ~d~~~~l~islee~~~G~~k~i~~~~~~----~-----------------------------------------------   29 (170)
T 1c3g_A            1 ETVQVNLPVSLEDLFVGKKKSFKIGRKG----P-----------------------------------------------   29 (170)
T ss_dssp             CEEEEEEEECHHHHHHTCEEEEEEEEEE----T-----------------------------------------------
T ss_pred             CCEEEEEEeEHHHhhCCcEEEEEEEEec----C-----------------------------------------------
Confidence            4899999999999999999999998641    0                                               


Q ss_pred             EEeceeeeecCCCcEEeeceEEEEEeCCCCCCCcEEEEccCcCCCCCCCCCccEEEEEEEEeccccccCCcceeEEEEec
Q 017925          140 EVISEYCRKCSGEGRIRLKKNIKVKVPPGVSTGSILRVVGEGDAGPRGGPPGDLYVYLDVEEIPGIQRDGIDLFSTISIS  219 (363)
Q Consensus       140 ~vi~~~C~~C~G~G~v~~~~~l~V~IP~Gv~~G~~irl~G~G~~~~~g~~~GDL~V~i~v~~h~~f~R~G~DL~~~~~I~  219 (363)
                                  .|.+ +.++++|+||||+++|++|+|+|+|+++..++++|||||+|++++|+.|+|+|+|||++++|+
T Consensus        30 ------------~G~~-~~~~l~V~Ip~G~~~G~~ir~~g~G~~~~~gg~~GDl~v~i~v~~h~~F~R~G~DL~~~~~Is   96 (170)
T 1c3g_A           30 ------------HGAS-EKTQIDIQLKPGWKAGTKITYKNQGDYNPQTGRRKTLQFVIQEKSHPNFKRDGDDLIYTLPLS   96 (170)
T ss_dssp             ------------TTEE-EEEEEEEECCTTCCTTCEEEESSCSSBCSSSSCBCEEEEEEEECCCSSEEEETTEEEEEECCB
T ss_pred             ------------CCcE-EeEEEEEEeCCCccCCCEEEEeccccCCCCCCccccEEEEEEEccCCccEEeCCcEeEEEEcC
Confidence                        1223 468999999999999999999999998777899999999999999999999999999999999


Q ss_pred             eEEeecCcEEEEeccCce-EEEecCCCCCCCcEEEEccCCCCCCCCCCCCccEEEEEEEEcCCCCCHHHHHHHH
Q 017925          220 YLDAIMGTVVKVKTVEGI-SELQVPPGTQPGDVLVLAKKGAPKLNKPSIRGDHLFTVKVTIPNRISAKERELLE  292 (363)
Q Consensus       220 l~eAllG~~~~v~tldG~-~~l~ip~gtq~g~~~~l~g~G~P~~~~~~~rGDL~V~~~V~~P~~l~~~q~~ll~  292 (363)
                      |++||||++++|+||||+ +.|++|++||||++++|+|+|||..++++.+|||||+|+|++|++||++|+++|+
T Consensus        97 l~eAllG~~~~v~tldG~~~~i~i~~~t~~g~~~rl~g~G~p~~~~~~~~GDL~V~~~V~~P~~Ls~~q~~~l~  170 (170)
T 1c3g_A           97 FKESLLGFSKTIQTIDGRTLPLSRVQPVQPSQTSTYPGQGMPTPKNPSQRGNLIVKYKVDYPISLNDAQKRAID  170 (170)
T ss_dssp             HHHHHHCEEEEEECSSSCEEEEEESSCCCTTCEEECTTCSCBCSSCTTSBCCEEEEECCBCCSSCCTTHHHHTC
T ss_pred             HHHHhCCCeEEeeCCCCCEEEEECCCccCCCcEEEEeCCCCCcCCCCCCCCCEEEEEEEECCCCCCHHHHHhhC
Confidence            999999999999999996 8999999999999999999999987665578999999999999999999999874

>3i38_A Putative chaperone DNAJ; structural genomics, protein structure initiative, midwest center for structural genomics, MCSG; 2.30A {Klebsiella pneumoniae subsp}

Probab=99.95  E-value=9.6e-29  Score=203.73  Aligned_cols=96  Identities=29%  Similarity=0.440  Sum_probs=90.5

Q ss_pred             EeccccccCCcceeEEEEeceEEeecCcEEEEeccCceEEEecCCCCCCCcEEEEccCCCCCCCCCCCCccEEEEEEEEc
Q 017925          200 EEIPGIQRDGIDLFSTISISYLDAIMGTVVKVKTVEGISELQVPPGTQPGDVLVLAKKGAPKLNKPSIRGDHLFTVKVTI  279 (363)
Q Consensus       200 ~~h~~f~R~G~DL~~~~~I~l~eAllG~~~~v~tldG~~~l~ip~gtq~g~~~~l~g~G~P~~~~~~~rGDL~V~~~V~~  279 (363)
                      ++|+.|+|+|+||+++++|+|.||++|++++|+|+||.+.|+||+|++||++++|+|+|||. ++  .+|||||+|+|++
T Consensus         2 kph~~F~R~G~DL~~~~~Isl~eAl~G~~i~v~tldG~~~v~ip~g~~~G~~~rl~G~G~p~-~~--~~GDL~v~~~V~~   78 (109)
T 3i38_A            2 NAHPLFDIVGHNLEIVLPLAPWEAALGAKVTVPTLKESILLTVPPGSQAGQRLRIKGKGLVS-KT--HTGDLFAVIKIVM   78 (109)
T ss_dssp             --CCCCEEETTEEEEEEEECHHHHHHCEEEEECCSSSCEEEEECTTCCTTCEEEETTCSCBC-SS--CBCCEEEEEEECC
T ss_pred             CCCCCeEEECCEEEEEEEcCHHHHhCCCEEEEEcCCCCEEEeeCCCcCcCeEEEECCccCCC-CC--CCcCEEEEEEEEC
Confidence            68999999999999999999999999999999999999999999999999999999999997 32  6999999999999


Q ss_pred             CCCCCHHHHHHHHHHHhhc
Q 017925          280 PNRISAKERELLEELASLR  298 (363)
Q Consensus       280 P~~l~~~q~~ll~~l~~~~  298 (363)
                      |++|+++|+++|++|+++.
T Consensus        79 P~~Ls~~q~~~l~~l~~~~   97 (109)
T 3i38_A           79 PTKPDEKARELWQQLAAAE   97 (109)
T ss_dssp             CSSCCHHHHHHHHHHHHHT
T ss_pred             CCCCCHHHHHHHHHHHhhc
Confidence            9999999999999999874

>1xao_A YDJ1, mitochondrial protein import protein MAS5; beta sheets, chaperone; 2.07A {Saccharomyces cerevisiae}

Probab=99.93  E-value=2e-26  Score=193.28  Aligned_cols=94  Identities=29%  Similarity=0.420  Sum_probs=84.5

Q ss_pred             ccccCCcceeEEEEeceEEeecCcEEEEeccCce-EEEecCCC--CCCCcEEEEccCCCCCCCCCCCCccEEEEEEEEcC
Q 017925          204 GIQRDGIDLFSTISISYLDAIMGTVVKVKTVEGI-SELQVPPG--TQPGDVLVLAKKGAPKLNKPSIRGDHLFTVKVTIP  280 (363)
Q Consensus       204 ~f~R~G~DL~~~~~I~l~eAllG~~~~v~tldG~-~~l~ip~g--tq~g~~~~l~g~G~P~~~~~~~rGDL~V~~~V~~P  280 (363)
                      .|+|+|+|||++++|+|.+||||++++|+||||+ +.|+||+|  +|||++++|+|+|||..+++ .+|||||+|+|++|
T Consensus         1 ~F~R~G~DL~~~~~Isl~eAllG~~i~v~tldG~~~~v~ip~g~v~~~G~~~rl~G~Gmp~~~~~-~~GDL~V~~~V~~P   79 (121)
T 1xao_A            1 SFKRDGDDLVYEAEIDLLTAIAGGEFALEHVSGDWLKVGIVPGEVIAPGMRKVIEGKGMPIPKYG-GYGNLIIKFTIKFP   79 (121)
T ss_dssp             CCEEETTEEEEEEEEEHHHHHHCEEEEEECTTSCEEEEEECTTSCCCTTCEEEETTCSCC-------CCCEEEEEEEECC
T ss_pred             CceEECCeEEEEEEcCHHHHhCCCEEEEecCCCCEEEEEeCCCCeeCCCcEEEECCCCCCCCCCC-CCCCEEEEEEEECC
Confidence            4999999999999999999999999999999997 89999999  99999999999999987665 68999999999999


Q ss_pred             CC--CCHHHHHHHHHHHhhc
Q 017925          281 NR--ISAKERELLEELASLR  298 (363)
Q Consensus       281 ~~--l~~~q~~ll~~l~~~~  298 (363)
                      +.  |+++|+++|++|+...
T Consensus        80 ~~~~ls~~q~~~l~~l~~~~   99 (121)
T 1xao_A           80 ENHFTSEENLKKLEEILPPR   99 (121)
T ss_dssp             CTTCSCHHHHHHHHHHSCCC
T ss_pred             CCCCCCHHHHHHHHHHcccc
Confidence            99  9999999999998643

>2ctt_A DNAJ homolog subfamily A member 3; ZING finger, beta-hairpin, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.90  E-value=1.9e-25  Score=182.53  Aligned_cols=103  Identities=34%  Similarity=0.697  Sum_probs=95.7

Q ss_pred             CCcEEEEEEeehhhhhcCCeEEEEEeeeEeccCCCCCceeeCceeeeCCCCccccEEEEeeeCCCcceeeeecCCCCCcc
Q 017925           59 GEDLRYDIVLEFSESIFGAEKEFELSHLETCEVCTGTGAKMGSKMRICSTCGGRGQVMRTDQTPFGLFSQVSVCPSCGGE  138 (363)
Q Consensus        59 g~di~~~l~ltlee~~~G~~~~i~~~~~~~C~~C~GsG~~~g~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~  138 (363)
                      |.|++++|+|||+|||+|++++|.+++.+.|+.|+|+|+++++.+.+|+.|+|+|++.+.+    |+|+++++|+.|+|+
T Consensus         1 ~~~~~~~l~vslee~~~G~~~~i~~~~~~~C~~C~G~G~~~g~~~~~C~~C~G~G~~~~~~----G~~~~~~~C~~C~G~   76 (104)
T 2ctt_A            1 GSSGSSGMELTFNQAAKGVNKEFTVNIMDTCERCNGKGNEPGTKVQHCHYCGGSGMETINT----GPFVMRSTCRRCGGR   76 (104)
T ss_dssp             CCCCCCCCCCCCSSCCSSSCTTCCSSCCEECSSSSSSSSCTTCCCEECSSSSSSCEEEEEE----TTEEEEEECSSSSSS
T ss_pred             CCceEEEEEEEHHHHcCCCEEEEEeeeeeECCCCcCCccCCCCCCccCCCCCCCEEEEEEe----CCEEEEEECCcCCCc
Confidence            4678899999999999999999999999999999999999999899999999999886654    678888999999999


Q ss_pred             cEEeceeeeecCCCcEEeeceEEEEEe
Q 017925          139 GEVISEYCRKCSGEGRIRLKKNIKVKV  165 (363)
Q Consensus       139 G~vi~~~C~~C~G~G~v~~~~~l~V~I  165 (363)
                      |++|+++|+.|+|.|+++++++|+|+|
T Consensus        77 G~~i~~~C~~C~G~G~v~~~k~l~V~~  103 (104)
T 2ctt_A           77 GSIIISPCVVCRGAGQAKQKKRSGPSS  103 (104)
T ss_dssp             SEECSSCCSSSSSCSEECCCCSSCCSC
T ss_pred             ceECCCcCCCCCCeeEEEEEEEEEEEc
Confidence            999999999999999999999988875

>1exk_A DNAJ protein; extended beta-hairpin, CXXCXGXG, zinc-binding motif, chaperone; NMR {Escherichia coli} SCOP: g.54.1.1

Probab=99.64  E-value=1e-16  Score=123.95  Aligned_cols=78  Identities=44%  Similarity=0.981  Sum_probs=70.3

Q ss_pred             CCeEEEEEeeeEeccCCCCCceeeCceeeeCCCCccccEEEEeeeCCCcceeeeecCCCCCcccEEeceeeeecCCCcEE
Q 017925           76 GAEKEFELSHLETCEVCTGTGAKMGSKMRICSTCGGRGQVMRTDQTPFGLFSQVSVCPSCGGEGEVISEYCRKCSGEGRI  155 (363)
Q Consensus        76 G~~~~i~~~~~~~C~~C~GsG~~~g~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~vi~~~C~~C~G~G~v  155 (363)
                      |++++|.|++.+.|+.|+|+|.+++....+|+.|+|+|+++..+    |+|++..+|+.|+|.|+++.++|+.|+|.|++
T Consensus         1 G~~~~i~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~----g~~~~~~~C~~C~G~G~~~~~~C~~C~G~G~~   76 (79)
T 1exk_A            1 GVTKEIRIPTLEECDVCHGSGAKPGTQPQTCPTCHGSGQVQMRQ----GFFAVQQTCPHCQGRGTLIKDPCNKCHGHGRV   76 (79)
T ss_dssp             CTTTSCCCCCEEECGGGTTTSBCSSSCCEECTTTTTSSEEEEEE----TTEEEEEECTTTTTSSEECSSBCGGGTTSSEE
T ss_pred             CcEEEEEcccceECCCCcccccCCCccCCCCCCCcCeEEEEEEc----CCCEEeeECcCCCCccEECCCcCCCCCCeEEE
Confidence            56678889999999999999999888888999999999987644    78888899999999999999999999999998


Q ss_pred             ee
Q 017925          156 RL  157 (363)
Q Consensus       156 ~~  157 (363)
                      ++
T Consensus        77 ~~   78 (79)
T 1exk_A           77 ER   78 (79)
T ss_dssp             EC
T ss_pred             ee
Confidence            64

>1nlt_A Protein YDJ1, mitochondrial protein import protein MAS5; beta-strands, chaperone, heat shock, mitochondrion; 2.70A {Saccharomyces cerevisiae} SCOP: b.4.1.1 b.4.1.1 g.54.1.1

Probab=99.42  E-value=3.4e-13  Score=125.97  Aligned_cols=131  Identities=21%  Similarity=0.411  Sum_probs=86.9

Q ss_pred             hhhhhcCCeEEEEEeeeEeccCCCCCceeeC---------ceeeeCCCCccccEEEEeeeCCCcceeeeecCCCCCcccE
Q 017925           70 FSESIFGAEKEFELSHLETCEVCTGTGAKMG---------SKMRICSTCGGRGQVMRTDQTPFGLFSQVSVCPSCGGEGE  140 (363)
Q Consensus        70 lee~~~G~~~~i~~~~~~~C~~C~GsG~~~g---------~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~  140 (363)
                      +.+.+.|.-.+-  .....|+.|+|+|....         ....+|+.|+|+|.++..          ..+|+.|+|.|.
T Consensus        40 ~C~~C~G~G~~~--g~~~~C~~C~G~G~~~~~~~~g~~~~~~~~~C~~C~G~G~~i~~----------~~~C~~C~G~g~  107 (248)
T 1nlt_A           40 LCKECEGRGGKK--GAVKKCTSCNGQGIKFVTRQMGPMIQRFQTECDVCHGTGDIIDP----------KDRCKSCNGKKV  107 (248)
T ss_dssp             ECTTTTTCSBST--TTCCCCTTSSSSSCEEEEEESSSEEEEEECSCTTCSSSSSCCCT----------TSBCSSSTTSCE
T ss_pred             eCCCCcCccCCC--CCCccCCCCCCCcEEEEEEecCceEEEEEEcCCCCCCcCEEecc----------CCCCcccCCCce
Confidence            445555544221  11378999999997531         246789999999987621          179999999998


Q ss_pred             Eecee--------------eeecCCCcE-------------Ee------------------------------------e
Q 017925          141 VISEY--------------CRKCSGEGR-------------IR------------------------------------L  157 (363)
Q Consensus       141 vi~~~--------------C~~C~G~G~-------------v~------------------------------------~  157 (363)
                      +....              -....|+|.             ++                                    .
T Consensus       108 ~~~~~~l~V~Ip~G~~~G~~ir~~g~G~~~~~g~~GDl~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAllG~~i~v~tld  187 (248)
T 1nlt_A          108 ENERKILEVHVEPGMKDGQRIVFKGEADQAPDVIPGDVVFIVSERPHKSFKRDGDDLVYEAEIDLLTAIAGGEFALEHVS  187 (248)
T ss_dssp             EEEEEEEEEEECTTCCTTCEEEETTCSCCCTTCBCCCEEEEEEECCCSSCEEETTEEEEEEEEEHHHHHHCBCCEEECSS
T ss_pred             EeeeEEEEEEECCCccCCCEEEEeeeecCCCCCCcceEEEEEEEecCccceeeCCEEEEEEEeCHHHHhcCCEEEEeCCC
Confidence            76432              223344431             00                                    0


Q ss_pred             ceEEEEEeCCC--CCCCcEEEEccCcCCCCCCCCCccEEEEEEEEeccc--cccCCcce
Q 017925          158 KKNIKVKVPPG--VSTGSILRVVGEGDAGPRGGPPGDLYVYLDVEEIPG--IQRDGIDL  212 (363)
Q Consensus       158 ~~~l~V~IP~G--v~~G~~irl~G~G~~~~~g~~~GDL~V~i~v~~h~~--f~R~G~DL  212 (363)
                      .+.++|+||||  +++|++++|+|+|++...+...|||||+|+|..+..  ++.+..+|
T Consensus       188 G~~~~i~ip~g~vt~~g~~~rl~g~Gmp~~~~~~~GDL~V~~~V~~P~~~~Ls~~q~~~  246 (248)
T 1nlt_A          188 GDWLKVGIVPGEVIAPGMRKVIEGKGMPIPKYGGYGNLIIKFTIKDPENHFTSEENLKK  246 (248)
T ss_dssp             SCEEECCBCTTTTCSTTCEEEETTCSCBCSSSCSBCCEEEEEEEECCC-----------
T ss_pred             CCEEEEEeCCCCeeCCCeEEEEcCCCCccCCCCCcCCEEEEEEEECCCCCCCCHHHHHh
Confidence            15799999999  999999999999998654435799999999998876  65544433

>3i38_A Putative chaperone DNAJ; structural genomics, protein structure initiative, midwest center for structural genomics, MCSG; 2.30A {Klebsiella pneumoniae subsp}

Probab=99.12  E-value=4.3e-11  Score=98.09  Aligned_cols=51  Identities=27%  Similarity=0.489  Sum_probs=42.5

Q ss_pred             EEEEEeCCCCCCCcEEEEccCcCCCCCCCCCccEEEEEEEEeccccccCCcce
Q 017925          160 NIKVKVPPGVSTGSILRVVGEGDAGPRGGPPGDLYVYLDVEEIPGIQRDGIDL  212 (363)
Q Consensus       160 ~l~V~IP~Gv~~G~~irl~G~G~~~~~g~~~GDL~V~i~v~~h~~f~R~G~DL  212 (363)
                      .++|+||+|+++|++++|+|+|++.. + .+|||||+|+|..+..+..+..++
T Consensus        39 ~~~v~ip~g~~~G~~~rl~G~G~p~~-~-~~GDL~v~~~V~~P~~Ls~~q~~~   89 (109)
T 3i38_A           39 SILLTVPPGSQAGQRLRIKGKGLVSK-T-HTGDLFAVIKIVMPTKPDEKAREL   89 (109)
T ss_dssp             CEEEEECTTCCTTCEEEETTCSCBCS-S-CBCCEEEEEEECCCSSCCHHHHHH
T ss_pred             CEEEeeCCCcCcCeEEEECCccCCCC-C-CCcCEEEEEEEECCCCCCHHHHHH
Confidence            36899999999999999999999863 3 789999999999887665544433

>1xao_A YDJ1, mitochondrial protein import protein MAS5; beta sheets, chaperone; 2.07A {Saccharomyces cerevisiae}

Probab=99.09  E-value=1.1e-10  Score=97.46  Aligned_cols=57  Identities=19%  Similarity=0.349  Sum_probs=43.2

Q ss_pred             eEEEEEeCCC--CCCCcEEEEccCcCCCCCCCCCccEEEEEEEEeccc--cccCCcceeEE
Q 017925          159 KNIKVKVPPG--VSTGSILRVVGEGDAGPRGGPPGDLYVYLDVEEIPG--IQRDGIDLFST  215 (363)
Q Consensus       159 ~~l~V~IP~G--v~~G~~irl~G~G~~~~~g~~~GDL~V~i~v~~h~~--f~R~G~DL~~~  215 (363)
                      +.++|+||||  +++|++++|+|+|++...+...|||||+|+|..+..  +..+..+++..
T Consensus        34 ~~~~v~ip~g~v~~~G~~~rl~G~Gmp~~~~~~~GDL~V~~~V~~P~~~~ls~~q~~~l~~   94 (121)
T 1xao_A           34 DWLKVGIVPGEVIAPGMRKVIEGKGMPIPKYGGYGNLIIKFTIKFPENHFTSEENLKKLEE   94 (121)
T ss_dssp             CEEEEEECTTSCCCTTCEEEETTCSCC------CCCEEEEEEEECCCTTCSCHHHHHHHHH
T ss_pred             CEEEEEeCCCCeeCCCcEEEECCCCCCCCCCCCCCCEEEEEEEECCCCCCCCHHHHHHHHH
Confidence            4678999999  999999999999998654446799999999998876  66655555443

>2q2g_A HSP40 protein, heat shock 40 kDa protein, putative (fragment); malaria, structural genomics, structural genomics consortium, SGC; 1.90A {Cryptosporidium parvum iowa II}

Probab=98.79  E-value=6.5e-09  Score=92.35  Aligned_cols=50  Identities=20%  Similarity=0.221  Sum_probs=41.9

Q ss_pred             EEEEEeCCCCCCCcEEEEccCcCCCCCC-CCCccEEEEEEEEeccccccCC
Q 017925          160 NIKVKVPPGVSTGSILRVVGEGDAGPRG-GPPGDLYVYLDVEEIPGIQRDG  209 (363)
Q Consensus       160 ~l~V~IP~Gv~~G~~irl~G~G~~~~~g-~~~GDL~V~i~v~~h~~f~R~G  209 (363)
                      .++|+||+|+++|++++|+|+|++...+ +..|||||+|+|..+..++.+.
T Consensus       121 ~v~i~ip~~t~~g~~~rl~g~Gmp~~~~~~~~GDL~V~~~V~~P~~Ls~~q  171 (180)
T 2q2g_A          121 NLQIPIKEIVNPKTRKIVPNEGMPIKNQPGQKGDLILEFDICFPKSLTPEQ  171 (180)
T ss_dssp             EEEEEECSCCCTTCEEEETTCSCBCSSSTTCBCCEEEEEEEECCSCCCHHH
T ss_pred             EEEEECCCccCCCEEEEECCcCCCcCCCCCCcCCEEEEEEEECCCCCCHHH
Confidence            5789999999999999999999986533 4679999999999887665443

>3agx_A DNAJ homolog subfamily B member 1; chaperone; 1.85A {Homo sapiens} PDB: 3agy_A 3agz_A 2qld_A

Probab=98.79  E-value=6.4e-09  Score=92.50  Aligned_cols=51  Identities=25%  Similarity=0.262  Sum_probs=42.5

Q ss_pred             EEEEEeCCCCCCCcEEEEccCcCCCCC-CCCCccEEEEEEEEeccccccCCc
Q 017925          160 NIKVKVPPGVSTGSILRVVGEGDAGPR-GGPPGDLYVYLDVEEIPGIQRDGI  210 (363)
Q Consensus       160 ~l~V~IP~Gv~~G~~irl~G~G~~~~~-g~~~GDL~V~i~v~~h~~f~R~G~  210 (363)
                      .++|+||+|+++|++++|+|+|++... .+..|||||+|+|..+..++.+..
T Consensus       121 ~~~i~i~~~t~~g~~~rl~g~Gmp~~~~~~~~GDL~V~~~V~~P~~ls~~q~  172 (181)
T 3agx_A          121 TIPVVFKDVIRPGMRRKVPGEGLPLPKTPEKRGDLIIEFEVIFPERIPQTSR  172 (181)
T ss_dssp             EEEEEECSCCCTTCEEEETTCSCBCSSSTTSBCCEEEEEEEECCSCCCHHHH
T ss_pred             EEEEECCCccCCCcEEEECCcCCCcCCCCCCcCCEEEEEEEECCCCCCHHHH
Confidence            578999999999999999999998654 356799999999998876654433

>1c3g_A Heat shock protein 40; beta sheets, short helices, chaperone; 2.70A {Saccharomyces cerevisiae} SCOP: b.4.1.1 b.4.1.1 PDB: 2b26_A

Probab=98.73  E-value=6.7e-09  Score=91.45  Aligned_cols=50  Identities=16%  Similarity=0.222  Sum_probs=41.8

Q ss_pred             EEEEEeCCCCCCCcEEEEccCcCCCCCC-CCCccEEEEEEEEeccccccCC
Q 017925          160 NIKVKVPPGVSTGSILRVVGEGDAGPRG-GPPGDLYVYLDVEEIPGIQRDG  209 (363)
Q Consensus       160 ~l~V~IP~Gv~~G~~irl~G~G~~~~~g-~~~GDL~V~i~v~~h~~f~R~G  209 (363)
                      .++|+||+|+++|++++|+|+|++...+ +..|||||+|+|..+..++.+.
T Consensus       115 ~~~i~i~~~t~~g~~~rl~g~G~p~~~~~~~~GDL~V~~~V~~P~~Ls~~q  165 (170)
T 1c3g_A          115 TLPLSRVQPVQPSQTSTYPGQGMPTPKNPSQRGNLIVKYKVDYPISLNDAQ  165 (170)
T ss_dssp             EEEEEESSCCCTTCEEECTTCSCBCSSCTTSBCCEEEEECCBCCSSCCTTH
T ss_pred             EEEEECCCccCCCcEEEEeCCCCCcCCCCCCCCCEEEEEEEECCCCCCHHH
Confidence            5789999999999999999999986533 3579999999999887665443

>3lz8_A Putative chaperone DNAJ; structure genomics, structural genomics, PSI-2, protein STRU initiative; 2.90A {Klebsiella pneumoniae subsp} PDB: 2kqx_A

Probab=98.56  E-value=5.8e-08  Score=94.02  Aligned_cols=75  Identities=16%  Similarity=0.247  Sum_probs=55.8

Q ss_pred             cCCcceeEEEEeceEEeecCcEEEEecc------C--------ceEEEecCCCCCCCcEEEEccCCCCCCCCCCCCccEE
Q 017925          207 RDGIDLFSTISISYLDAIMGTVVKVKTV------E--------GISELQVPPGTQPGDVLVLAKKGAPKLNKPSIRGDHL  272 (363)
Q Consensus       207 R~G~DL~~~~~I~l~eAllG~~~~v~tl------d--------G~~~l~ip~gtq~g~~~~l~g~G~P~~~~~~~rGDL~  272 (363)
                      +.|.||++++.|+|.||+.|.+.+|..-      .        ..++|+||||+++|++|+|+|+|.|..+. +.+||||
T Consensus       138 ~~g~Dl~~~l~vsleea~~G~~k~i~i~~~v~~g~G~v~~~~~~~l~V~IP~Gv~~G~~Irl~G~G~~g~~g-g~~GDL~  216 (329)
T 3lz8_A          138 ARGHDLEIEVAVFLEETLAEQTRTISYNLPVYNVFGMIESETPKTLNVKIPAGVVDGQRIRLKGQGTPGENG-GPNGDLW  216 (329)
T ss_dssp             CCCCCEEEEECCCTTGGGSCEEEEEEEEEEECCSCC-CCEEEEEEEEEEECTTCCTTCEEEESSCSCCC----CCCCCEE
T ss_pred             CCCCCEEEEEecchhhhhhccceEEEEEEEeecCCeEEEEecceEEEEeCCCCCCCCCEEEEcccccCCCCC-CCCCcEE
Confidence            4577888888888888888776655322      1        23579999999999999999999996543 3579999


Q ss_pred             EEEEEEcCCC
Q 017925          273 FTVKVTIPNR  282 (363)
Q Consensus       273 V~~~V~~P~~  282 (363)
                      |+|+|.-...
T Consensus       217 v~I~v~~h~~  226 (329)
T 3lz8_A          217 LVIHIAPHPL  226 (329)
T ss_dssp             EEECCCCCSS
T ss_pred             EEEEEecCCc
Confidence            9988765543

>3pmq_A Decaheme cytochrome C MTRF; greek KEY, C type cytochrome, outer membrane, electron trans; HET: HEC; 3.20A {Shewanella oneidensis}

Probab=98.16  E-value=1.6e-08  Score=105.69  Aligned_cols=78  Identities=19%  Similarity=0.350  Sum_probs=60.5

Q ss_pred             EEEEEeehhhhhcCCeEEEEEeeeEeccCCCCCceeeCc---eeeeCCCCccccEEEE--------eeeCCCcce-eeee
Q 017925           63 RYDIVLEFSESIFGAEKEFELSHLETCEVCTGTGAKMGS---KMRICSTCGGRGQVMR--------TDQTPFGLF-SQVS  130 (363)
Q Consensus        63 ~~~l~ltlee~~~G~~~~i~~~~~~~C~~C~GsG~~~g~---~~~~C~~C~G~G~~~~--------~~~~~~G~~-~~~~  130 (363)
                      .++++|+|+|+++|.+++++|.+.+.|..|+|+|+++++   .+.+|+.|+|+.....        ++.+=.|.| +...
T Consensus       168 ~~~l~i~feeA~~G~~k~i~v~~~~~C~tCHGsGA~~Gt~~~~~~tC~tCHGs~~~~~~~~~~~~~iH~iH~G~fP~~~~  247 (669)
T 3pmq_A          168 ITNQHYDWQSSGNMLAYTRNLVSIDTCNSCHSNLAFHGGRYNQVETCVTCHNSKKVSNAADIFPQMIHSKHLTGFPQSIS  247 (669)
T ss_dssp             SCCCEEEEECSSSSCCCCCCCCCSHHHHHHHSSCCTTTTTSCSSSCSTTTSSTTTCCCSSCSHHHHHHHHTTSSCSSCTT
T ss_pred             eEEEEEEhHHhhCCCceEEEeccCCcCCCCCCCCCcCCccCcCCccCCCCCCCcccCCccccccceeeeeeccCCCCccC
Confidence            478899999999999999999999999999999999997   7889999999942110        111112333 3346


Q ss_pred             cCCCCCcccE
Q 017925          131 VCPSCGGEGE  140 (363)
Q Consensus       131 ~C~~C~G~G~  140 (363)
                      .|..|+..+.
T Consensus       248 ~C~~CH~~~~  257 (669)
T 3pmq_A          248 NCQTCHADNP  257 (669)
T ss_dssp             CCTTTSCCCT
T ss_pred             cchhhcCCcc
Confidence            8999998775

>3lcz_A YCZA, inhibitor of trap, regulated by T-box (Trp) seque; anti-trap, tryptophan RNA-binding attenuation PROT transcription attenuation; 2.06A {Bacillus licheniformis} PDB: 3ld0_A

Probab=97.96  E-value=1.9e-06  Score=61.14  Aligned_cols=30  Identities=40%  Similarity=0.858  Sum_probs=26.9

Q ss_pred             eecCCCCCcccEEeceeeeecCCCcEEeec
Q 017925          129 VSVCPSCGGEGEVISEYCRKCSGEGRIRLK  158 (363)
Q Consensus       129 ~~~C~~C~G~G~vi~~~C~~C~G~G~v~~~  158 (363)
                      +++|+.|+|+|++|.++|+.|+|.|.++..
T Consensus         9 ~~~C~~C~GsG~~i~~~C~~C~G~G~v~~~   38 (53)
T 3lcz_A            9 ETTCPNCNGSGREEPEPCPKCLGKGVILTA   38 (53)
T ss_dssp             EEECTTTTTSCEETTEECTTTTTSSEEECH
T ss_pred             eccCcCCcccccCCCCcCCCCCCcEEEEEE
Confidence            479999999999999999999999988754

>2ctt_A DNAJ homolog subfamily A member 3; ZING finger, beta-hairpin, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=97.87  E-value=7.2e-06  Score=66.05  Aligned_cols=47  Identities=34%  Similarity=0.887  Sum_probs=38.2

Q ss_pred             eEeccCCCCCceee---C--ceeeeCCCCccccEEEEeeeCCCcceeeeecCCCCCcccEEece
Q 017925           86 LETCEVCTGTGAKM---G--SKMRICSTCGGRGQVMRTDQTPFGLFSQVSVCPSCGGEGEVISE  144 (363)
Q Consensus        86 ~~~C~~C~GsG~~~---g--~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~vi~~  144 (363)
                      ...|+.|+|+|...   +  ....+|+.|+|+|.++.            .+|+.|+|.|.+...
T Consensus        45 ~~~C~~C~G~G~~~~~~G~~~~~~~C~~C~G~G~~i~------------~~C~~C~G~G~v~~~   96 (104)
T 2ctt_A           45 VQHCHYCGGSGMETINTGPFVMRSTCRRCGGRGSIII------------SPCVVCRGAGQAKQK   96 (104)
T ss_dssp             CEECSSSSSSCEEEEEETTEEEEEECSSSSSSSEECS------------SCCSSSSSCSEECCC
T ss_pred             CccCCCCCCCEEEEEEeCCEEEEEECCcCCCcceECC------------CcCCCCCCeeEEEEE
Confidence            46899999999763   2  24578999999998764            789999999998654

>1exk_A DNAJ protein; extended beta-hairpin, CXXCXGXG, zinc-binding motif, chaperone; NMR {Escherichia coli} SCOP: g.54.1.1

Probab=97.86  E-value=6.9e-06  Score=62.61  Aligned_cols=46  Identities=33%  Similarity=0.826  Sum_probs=36.3

Q ss_pred             eeEeccCCCCCceeeC-----ceeeeCCCCccccEEEEeeeCCCcceeeeecCCCCCcccEEe
Q 017925           85 HLETCEVCTGTGAKMG-----SKMRICSTCGGRGQVMRTDQTPFGLFSQVSVCPSCGGEGEVI  142 (363)
Q Consensus        85 ~~~~C~~C~GsG~~~g-----~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~vi  142 (363)
                      ....|+.|+|+|....     ....+|+.|+|+|.++.            .+|+.|+|.|.+.
T Consensus        27 ~~~~C~~C~G~G~~~~~~g~~~~~~~C~~C~G~G~~~~------------~~C~~C~G~G~~~   77 (79)
T 1exk_A           27 QPQTCPTCHGSGQVQMRQGFFAVQQTCPHCQGRGTLIK------------DPCNKCHGHGRVE   77 (79)
T ss_dssp             CCEECTTTTTSSEEEEEETTEEEEEECTTTTTSSEECS------------SBCGGGTTSSEEE
T ss_pred             cCCCCCCCcCeEEEEEEcCCCEEeeECcCCCCccEECC------------CcCCCCCCeEEEe
Confidence            3568999999997642     13468999999998753            6899999999875

>2bx9_A Anti-trap, AT, tryptophan RNA-binding attenuator protein-inhibit protein; transcription regulation; 2.80A {Bacillus subtilis} PDB: 2ko8_A* 2zp8_E* 2zp9_C*

Probab=97.85  E-value=2.1e-06  Score=60.91  Aligned_cols=39  Identities=23%  Similarity=0.618  Sum_probs=29.7

Q ss_pred             eEeccCCCCCceeeCceeeeCCCCccccEEEEee-eCCCccee
Q 017925           86 LETCEVCTGTGAKMGSKMRICSTCGGRGQVMRTD-QTPFGLFS  127 (363)
Q Consensus        86 ~~~C~~C~GsG~~~g~~~~~C~~C~G~G~~~~~~-~~~~G~~~  127 (363)
                      ...|+.|+|+|....   .+|+.|+|+|.++..+ ++++|+++
T Consensus         9 ~~~C~~C~GsG~~~~---~~C~~C~G~G~v~~~qG~~~~g~~~   48 (53)
T 2bx9_A            9 EVACPKCERAGEIEG---TPCPACSGKGVILTAQGYTLLDFIQ   48 (53)
T ss_dssp             EEECTTTTTSSEETT---EECTTTTTSSEEECHHHHHHHHHHH
T ss_pred             cccCCCCcceeccCC---CCCccCCCCccEEEEecccHHHHHH
Confidence            457999999998854   6799999999887766 56666554

>2bx9_A Anti-trap, AT, tryptophan RNA-binding attenuator protein-inhibit protein; transcription regulation; 2.80A {Bacillus subtilis} PDB: 2ko8_A* 2zp8_E* 2zp9_C*

Probab=97.31  E-value=0.0001  Score=52.13  Aligned_cols=27  Identities=41%  Similarity=0.912  Sum_probs=14.8

Q ss_pred             ecCCCCCcccEEeceeeeecCCCcEEe
Q 017925          130 SVCPSCGGEGEVISEYCRKCSGEGRIR  156 (363)
Q Consensus       130 ~~C~~C~G~G~vi~~~C~~C~G~G~v~  156 (363)
                      .+|+.|+|.|.++..+|+.|+|.|.+.
T Consensus        10 ~~C~~C~GsG~~~~~~C~~C~G~G~v~   36 (53)
T 2bx9_A           10 VACPKCERAGEIEGTPCPACSGKGVIL   36 (53)
T ss_dssp             EECTTTTTSSEETTEECTTTTTSSEEE
T ss_pred             ccCCCCcceeccCCCCCccCCCCccEE
Confidence            455555555555555555555555544

>3lcz_A YCZA, inhibitor of trap, regulated by T-box (Trp) seque; anti-trap, tryptophan RNA-binding attenuation PROT transcription attenuation; 2.06A {Bacillus licheniformis} PDB: 3ld0_A

Probab=97.20  E-value=0.00014  Score=51.47  Aligned_cols=26  Identities=35%  Similarity=0.888  Sum_probs=13.8

Q ss_pred             EeccCCCCCceeeCceeeeCCCCccccEE
Q 017925           87 ETCEVCTGTGAKMGSKMRICSTCGGRGQV  115 (363)
Q Consensus        87 ~~C~~C~GsG~~~g~~~~~C~~C~G~G~~  115 (363)
                      .+|+.|+|+|....   ..|+.|+|+|.+
T Consensus        10 ~~C~~C~GsG~~i~---~~C~~C~G~G~v   35 (53)
T 3lcz_A           10 TTCPNCNGSGREEP---EPCPKCLGKGVI   35 (53)
T ss_dssp             EECTTTTTSCEETT---EECTTTTTSSEE
T ss_pred             ccCcCCcccccCCC---CcCCCCCCcEEE
Confidence            45555555555443   445555555554

>1bq0_A DNAJ, HSP40; chaperone, heat shock, protein folding, DNAK; NMR {Escherichia coli} SCOP: a.2.3.1 PDB: 1xbl_A 1bqz_A

Probab=93.76  E-value=0.018  Score=45.74  Aligned_cols=36  Identities=33%  Similarity=0.617  Sum_probs=11.1

Q ss_pred             CcccccccccCCCCCCCCCCC--CCChhhhhhhhhCCCC
Q 017925            1 MYDQYGEAGVKSTVGGGSSAY--TTNPFDLFETFFGPSM   37 (363)
Q Consensus         1 ~YD~~G~~g~~~g~gg~~~g~--~~~~~diF~~fFG~~~   37 (363)
                      .||+||++++..++.++ +++  +.++.|+|++||+..|
T Consensus        64 ~YD~~~~~~~~~~~~~~-~~~~~~~~~~~~f~~~f~~~f  101 (103)
T 1bq0_A           64 AYDQYGHAAFEQGGMGG-GGFGGGADFSDIFGDVFGDIF  101 (103)
T ss_dssp             HTTTSTTTSSCSCC-------------------------
T ss_pred             HHHHHhhhhhcccCcCC-CCCCCCCCHHHHHHHHHHhhc
Confidence            49999999987542211 121  1256788888887543

>2qkd_A Zinc finger protein ZPR1; helical hairpins, beta helix, anti-parrallel beta sheet, double straded anti-parallel beta helix, metal binding protein; 2.00A {Mus musculus}

Probab=84.86  E-value=2.7  Score=41.30  Aligned_cols=26  Identities=15%  Similarity=0.239  Sum_probs=20.5

Q ss_pred             cEEEEeccCceEEEecCCCCCCCcEEEEcc
Q 017925          227 TVVKVKTVEGISELQVPPGTQPGDVLVLAK  256 (363)
Q Consensus       227 ~~~~v~tldG~~~l~ip~gtq~g~~~~l~g  256 (363)
                      +++.||-|+    |.||||++.|.+-.|.|
T Consensus       295 a~i~IPEL~----lei~pg~~~G~~TTVEG  320 (404)
T 2qkd_A          295 CSVEIPELE----FELGMAVLGGKFTTLEG  320 (404)
T ss_dssp             CEEEEGGGT----EEECTTTTCSEEEEHHH
T ss_pred             eEEEeeeee----EEecCCCCCceEEeHHH
Confidence            567777775    78999998888877766

>2qkd_A Zinc finger protein ZPR1; helical hairpins, beta helix, anti-parrallel beta sheet, double straded anti-parallel beta helix, metal binding protein; 2.00A {Mus musculus}

Probab=84.31  E-value=1.4  Score=43.33  Aligned_cols=26  Identities=12%  Similarity=0.396  Sum_probs=20.8

Q ss_pred             cEEEEeccCceEEEecCCCCCCCcEEEEcc
Q 017925          227 TVVKVKTVEGISELQVPPGTQPGDVLVLAK  256 (363)
Q Consensus       227 ~~~~v~tldG~~~l~ip~gtq~g~~~~l~g  256 (363)
                      +++.||-|+    |.||||++-|.+-.|.|
T Consensus        87 ati~IPEL~----~eI~pg~~~G~iTTVEG  112 (404)
T 2qkd_A           87 ATTRIPELD----FEIPAFSQKGALTTVEG  112 (404)
T ss_dssp             CEEEEGGGT----EEECTTSSCCEEEEHHH
T ss_pred             cEEEeeeee----EEecCccCCceEEeHHH
Confidence            567788775    78999998888888766

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	363
d1exka_	79	g.54.1.1 (A:) Cysteine-rich domain of the chaperon	8e-19
d1m1qa_	90	a.138.1.3 (A:) Flavocytochrome c3 (respiratory fum	5e-17
d1nlta3	74	g.54.1.1 (A:139-212) Mitochondrial protein import	1e-16
d1c3ga2	90	b.4.1.1 (A:260-349) Heat shock protein 40 Sis1 {Ba	1e-16
d1c3ga1	80	b.4.1.1 (A:180-259) Heat shock protein 40 Sis1 {Ba	5e-13
d1nlta2	80	b.4.1.1 (A:258-337) Mitochondrial protein import p	1e-11
d1nlta2	80	b.4.1.1 (A:258-337) Mitochondrial protein import p	7e-04
d1nlta1	74	b.4.1.1 (A:110-138,A:213-257) Mitochondrial protei	2e-07
d1nlta1	74	b.4.1.1 (A:110-138,A:213-257) Mitochondrial protei	3e-06
d1qo8a1	101	a.138.1.3 (A:2-102) Flavocytochrome c3 (respirator	4e-06

>d1exka_ g.54.1.1 (A:) Cysteine-rich domain of the chaperone protein DnaJ {Escherichia coli [TaxId: 562]} Length = 79

class: Small proteins
fold: DnaJ/Hsp40 cysteine-rich domain
superfamily: DnaJ/Hsp40 cysteine-rich domain
family: DnaJ/Hsp40 cysteine-rich domain
domain: Cysteine-rich domain of the chaperone protein DnaJ
species: Escherichia coli [TaxId: 562]

 Score = 77.8 bits (191), Expect = 8e-19
 Identities = 34/81 (41%), Positives = 44/81 (54%), Gaps = 4/81 (4%)

Query: 76  GAEKEFELSHLETCEVCTGTGAKMGSKMRICSTCGGRGQVMRTDQTPFGLFSQVSVCPSC 135
           G  KE  +  LE C+VC G+GAK G++ + C TC G GQV        G F+    CP C
Sbjct: 1   GVTKEIRIPTLEECDVCHGSGAKPGTQPQTCPTCHGSGQVQM----RQGFFAVQQTCPHC 56

Query: 136 GGEGEVISEYCRKCSGEGRIR 156
            G G +I + C KC G GR+ 
Sbjct: 57  QGRGTLIKDPCNKCHGHGRVE 77

>d1m1qa_ a.138.1.3 (A:) Flavocytochrome c3 (respiratory fumarate reductase), N-terminal domain {Shewanella oneidensis [TaxId: 70863]} Length = 90

class: All alpha proteins
fold: Multiheme cytochromes
superfamily: Multiheme cytochromes
family: Di-heme elbow motif
domain: Flavocytochrome c3 (respiratory fumarate reductase), N-terminal domain
species: Shewanella oneidensis [TaxId: 70863]

 Score = 73.3 bits (179), Expect = 5e-17
 Identities = 16/84 (19%), Positives = 25/84 (29%), Gaps = 5/84 (5%)

Query: 78  EKEFELSH--LETCEVCTGTG---AKMGSKMRICSTCGGRGQVMRTDQTPFGLFSQVSVC 132
           +++    H     CE C   G   A    +   C +C G+   M     P       + C
Sbjct: 1   DQKLSDFHAESGGCESCHKDGTPSADGAFEFAQCQSCHGKLSEMDAVHKPHDGNLVCADC 60

Query: 133 PSCGGEGEVISEYCRKCSGEGRIR 156
            +           C  C  +GR  
Sbjct: 61  HAVHDMNVGQKPTCESCHDDGRTS 84

>d1nlta3 g.54.1.1 (A:139-212) Mitochondrial protein import protein mas5 (Hsp40, Ydj1), insert domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 74

class: Small proteins
fold: DnaJ/Hsp40 cysteine-rich domain
superfamily: DnaJ/Hsp40 cysteine-rich domain
family: DnaJ/Hsp40 cysteine-rich domain
domain: Mitochondrial protein import protein mas5 (Hsp40, Ydj1), insert domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 72.0 bits (176), Expect = 1e-16
 Identities = 20/71 (28%), Positives = 33/71 (46%), Gaps = 3/71 (4%)

Query: 88  TCEVCTGTGAKMGSKMRICSTCGGRGQVMRTDQTPFGLFSQVSVCPSCGGEGEVISEY-- 145
            C+ C G G K G+  + C++C G+G    T Q    +    + C  C G G++I     
Sbjct: 4   LCKECEGRGGKKGAVKK-CTSCNGQGIKFVTRQMGPMIQRFQTECDVCHGTGDIIDPKDR 62

Query: 146 CRKCSGEGRIR 156
           C+ C+G+    
Sbjct: 63  CKSCNGKKVEN 73

>d1c3ga2 b.4.1.1 (A:260-349) Heat shock protein 40 Sis1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 90

class: All beta proteins
fold: HSP40/DnaJ peptide-binding domain
superfamily: HSP40/DnaJ peptide-binding domain
family: HSP40/DnaJ peptide-binding domain
domain: Heat shock protein 40 Sis1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 72.3 bits (177), Expect = 1e-16
 Identities = 22/88 (25%), Positives = 44/88 (50%), Gaps = 1/88 (1%)

Query: 206 QRDGIDLFSTISISYLDAIMGTVVKVKTVEGIS-ELQVPPGTQPGDVLVLAKKGAPKLNK 264
           +RDG DL  T+ +S+ ++++G    ++T++G +  L      QP        +G P    
Sbjct: 3   KRDGDDLIYTLPLSFKESLLGFSKTIQTIDGRTLPLSRVQPVQPSQTSTYPGQGMPTPKN 62

Query: 265 PSIRGDHLFTVKVTIPNRISAKERELLE 292
           PS RG+ +   KV  P  ++  ++  ++
Sbjct: 63  PSQRGNLIVKYKVDYPISLNDAQKRAID 90

>d1c3ga1 b.4.1.1 (A:180-259) Heat shock protein 40 Sis1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 80

class: All beta proteins
fold: HSP40/DnaJ peptide-binding domain
superfamily: HSP40/DnaJ peptide-binding domain
family: HSP40/DnaJ peptide-binding domain
domain: Heat shock protein 40 Sis1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 61.9 bits (150), Expect = 5e-13
 Identities = 13/69 (18%), Positives = 25/69 (36%), Gaps = 3/69 (4%)

Query: 135 CGGEGEVISEYCRKCSGEGRIRLKKNIKVKVPPGVSTGSILRVVGEGDAGPRGGPPGDLY 194
             G+ +      +   G      K  I +++ PG   G+ +    +GD  P+ G    L 
Sbjct: 15  FVGKKKSFKIGRKGPHGASE---KTQIDIQLKPGWKAGTKITYKNQGDYNPQTGRRKTLQ 71

Query: 195 VYLDVEEIP 203
             +  +  P
Sbjct: 72  FVIQEKSHP 80

>d1nlta2 b.4.1.1 (A:258-337) Mitochondrial protein import protein mas5 (Hsp40, Ydj1), C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 80

class: All beta proteins
fold: HSP40/DnaJ peptide-binding domain
superfamily: HSP40/DnaJ peptide-binding domain
family: HSP40/DnaJ peptide-binding domain
domain: Mitochondrial protein import protein mas5 (Hsp40, Ydj1), C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 57.6 bits (139), Expect = 1e-11
 Identities = 20/78 (25%), Positives = 28/78 (35%), Gaps = 4/78 (5%)

Query: 206 QRDGIDLFSTISISYLDAIMGTVVKVKTVEGI---SELQVPPGTQPGDVLVLAKKGAPKL 262
           +RDG DL     I  L AI G    ++ V G      +       PG   V+  KG P  
Sbjct: 3   KRDGDDLVYEAEIDLLTAIAGGEFALEHVSGDWLKVGIVPGEVIAPGMRKVIEGKGMPIP 62

Query: 263 NKPSIRGDHLFTVKVTIP 280
                 G+ +    +  P
Sbjct: 63  KYGG-YGNLIIKFTIKDP 79

>d1nlta2 b.4.1.1 (A:258-337) Mitochondrial protein import protein mas5 (Hsp40, Ydj1), C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 80

class: All beta proteins
fold: HSP40/DnaJ peptide-binding domain
superfamily: HSP40/DnaJ peptide-binding domain
family: HSP40/DnaJ peptide-binding domain
domain: Mitochondrial protein import protein mas5 (Hsp40, Ydj1), C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 35.7 bits (82), Expect = 7e-04
 Identities = 10/66 (15%), Positives = 22/66 (33%), Gaps = 10/66 (15%)

Query: 135 CGGEGEVISEYCRKCSGEGRIRLKKNIKVKVPPGVSTGSILRVVGEGDAGPRGGPPGDLY 194
            GGE  +                   + +     ++ G    + G+G   P+ G  G+L 
Sbjct: 22  AGGEFALEHVSGDWL----------KVGIVPGEVIAPGMRKVIEGKGMPIPKYGGYGNLI 71

Query: 195 VYLDVE 200
           +   ++
Sbjct: 72  IKFTIK 77

>d1nlta1 b.4.1.1 (A:110-138,A:213-257) Mitochondrial protein import protein mas5 (Hsp40, Ydj1), C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 74

class: All beta proteins
fold: HSP40/DnaJ peptide-binding domain
superfamily: HSP40/DnaJ peptide-binding domain
family: HSP40/DnaJ peptide-binding domain
domain: Mitochondrial protein import protein mas5 (Hsp40, Ydj1), C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 45.9 bits (108), Expect = 2e-07
 Identities = 19/71 (26%), Positives = 29/71 (40%), Gaps = 2/71 (2%)

Query: 207 RDGIDLFSTISISYLDAIMGTVVKVKTVEGISELQVPPGTQPGDVLVLAKKGAPKLNKPS 266
           + G D+   IS S  +   G   K+     I E+ V PG + G  +V   +     +   
Sbjct: 2   QRGKDIKHEISASLEELYKGRTAKLALNRKILEVHVEPGMKDGQRIVFKGEADQAPDV-- 59

Query: 267 IRGDHLFTVKV 277
           I GD +F V  
Sbjct: 60  IPGDVVFIVSE 70

>d1nlta1 b.4.1.1 (A:110-138,A:213-257) Mitochondrial protein import protein mas5 (Hsp40, Ydj1), C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 74

class: All beta proteins
fold: HSP40/DnaJ peptide-binding domain
superfamily: HSP40/DnaJ peptide-binding domain
family: HSP40/DnaJ peptide-binding domain
domain: Mitochondrial protein import protein mas5 (Hsp40, Ydj1), C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 42.4 bits (99), Expect = 3e-06
 Identities = 13/43 (30%), Positives = 19/43 (44%), Gaps = 1/43 (2%)

Query: 159 KNIKVKVPPGVSTGSILRVVGEGDAGPRGGPPGDLYVYLDVEE 201
           K ++V V PG+  G  +   GE D  P    PGD+   +    
Sbjct: 31  KILEVHVEPGMKDGQRIVFKGEADQAP-DVIPGDVVFIVSERP 72

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	363
d1c3ga2	90	Heat shock protein 40 Sis1 {Baker's yeast (Sacchar	99.93
d1nlta2	80	Mitochondrial protein import protein mas5 (Hsp40,	99.85
d1c3ga1	80	Heat shock protein 40 Sis1 {Baker's yeast (Sacchar	99.72
d1exka_	79	Cysteine-rich domain of the chaperone protein DnaJ	99.71
d1nlta1	74	Mitochondrial protein import protein mas5 (Hsp40,	99.7
d1nlta3	74	Mitochondrial protein import protein mas5 (Hsp40,	99.59
d1nlta1	74	Mitochondrial protein import protein mas5 (Hsp40,	99.41
d1c3ga2	90	Heat shock protein 40 Sis1 {Baker's yeast (Sacchar	99.05
d1nlta2	80	Mitochondrial protein import protein mas5 (Hsp40,	99.04
d1c3ga1	80	Heat shock protein 40 Sis1 {Baker's yeast (Sacchar	98.72
d1exka_	79	Cysteine-rich domain of the chaperone protein DnaJ	98.02
d1m1qa_	90	Flavocytochrome c3 (respiratory fumarate reductase	97.67
d1nlta3	74	Mitochondrial protein import protein mas5 (Hsp40,	97.63
d1m1qa_	90	Flavocytochrome c3 (respiratory fumarate reductase	83.12

>d1c3ga2 b.4.1.1 (A:260-349) Heat shock protein 40 Sis1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: HSP40/DnaJ peptide-binding domain
superfamily: HSP40/DnaJ peptide-binding domain
family: HSP40/DnaJ peptide-binding domain
domain: Heat shock protein 40 Sis1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.93  E-value=3e-27  Score=186.43  Aligned_cols=89  Identities=25%  Similarity=0.480  Sum_probs=84.8

Q ss_pred             ccccCCcceeEEEEeceEEeecCcEEEEeccCce-EEEecCCCCCCCcEEEEccCCCCCCCCCCCCccEEEEEEEEcCCC
Q 017925          204 GIQRDGIDLFSTISISYLDAIMGTVVKVKTVEGI-SELQVPPGTQPGDVLVLAKKGAPKLNKPSIRGDHLFTVKVTIPNR  282 (363)
Q Consensus       204 ~f~R~G~DL~~~~~I~l~eAllG~~~~v~tldG~-~~l~ip~gtq~g~~~~l~g~G~P~~~~~~~rGDL~V~~~V~~P~~  282 (363)
                      .|+|+|+||+++++|++.||++|++++|+|+||+ +.|+||++++||++++|+|+|||..++++.||||||+|+|++|++
T Consensus         1 ~F~R~G~DL~~~~~I~~~eal~G~~~~i~~~dG~~i~i~ip~~~~~g~~~~i~g~G~p~~~~~~~rGdL~V~~~v~~P~~   80 (90)
T d1c3ga2           1 NFKRDGDDLIYTLPLSFKESLLGFSKTIQTIDGRTLPLSRVQPVQPSQTSTYPGQGMPTPKNPSQRGNLIVKYKVDYPIS   80 (90)
T ss_dssp             SEEEETTEEEEEECCBHHHHHHCEEEEEECSSSCEEEEEESSCCCTTCEEECTTCSCBCSSCTTSBCCEEEEECCBCCSS
T ss_pred             CCeEeCCeEEEEEEeCHHHHhcCCeEEEecccccceecccccccccccccccCCCCCCcCCCCCCcCCEEEEEEEEcCCC
Confidence            4999999999999999999999999999999996 689999999999999999999999877778999999999999999


Q ss_pred             CCHHHHHHHH
Q 017925          283 ISAKERELLE  292 (363)
Q Consensus       283 l~~~q~~ll~  292 (363)
                      ||++|+++||
T Consensus        81 ls~~qk~~lE   90 (90)
T d1c3ga2          81 LNDAQKRAID   90 (90)
T ss_dssp             CCTTHHHHTC
T ss_pred             CCHHHHHhhC
Confidence            9999999985

>d1nlta2 b.4.1.1 (A:258-337) Mitochondrial protein import protein mas5 (Hsp40, Ydj1), C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: HSP40/DnaJ peptide-binding domain
superfamily: HSP40/DnaJ peptide-binding domain
family: HSP40/DnaJ peptide-binding domain
domain: Mitochondrial protein import protein mas5 (Hsp40, Ydj1), C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.85  E-value=3e-22  Score=154.05  Aligned_cols=77  Identities=29%  Similarity=0.428  Sum_probs=71.7

Q ss_pred             ccccCCcceeEEEEeceEEeecCcEEEEeccCce-EEEecCCC--CCCCcEEEEccCCCCCCCCCCCCccEEEEEEEEcC
Q 017925          204 GIQRDGIDLFSTISISYLDAIMGTVVKVKTVEGI-SELQVPPG--TQPGDVLVLAKKGAPKLNKPSIRGDHLFTVKVTIP  280 (363)
Q Consensus       204 ~f~R~G~DL~~~~~I~l~eAllG~~~~v~tldG~-~~l~ip~g--tq~g~~~~l~g~G~P~~~~~~~rGDL~V~~~V~~P  280 (363)
                      .|+|+|+||+++++|++.||++|++++|+|+||+ ++|+||++  +++|++++|+|+|||..++ +.+|||||+|+|++|
T Consensus         1 tF~R~G~dL~~~~~I~~~eal~G~~~~i~~~dg~~~~i~i~~~~~~~~g~~~~i~g~G~p~~~~-~~~GDL~v~~~V~~P   79 (80)
T d1nlta2           1 SFKRDGDDLVYEAEIDLLTAIAGGEFALEHVSGDWLKVGIVPGEVIAPGMRKVIEGKGMPIPKY-GGYGNLIIKFTIKDP   79 (80)
T ss_dssp             SCEEETTEEEEEEEEEHHHHHHCBCCEEECSSSCEEECCBCTTTTCSTTCEEEETTCSCBCSSS-CSBCCEEEEEEEECC
T ss_pred             CcEEeCCEEEEEEEeCHHHHhCCCEEEEEecCcceEEEEeCCCCCcCCCCEEEecCCCCCCCCc-CCcCcEEEEEEEEcC
Confidence            4999999999999999999999999999999997 57888876  9999999999999999875 479999999999999


Q ss_pred             C
Q 017925          281 N  281 (363)
Q Consensus       281 ~  281 (363)
                      +
T Consensus        80 k   80 (80)
T d1nlta2          80 E   80 (80)
T ss_dssp             C
T ss_pred             C
Confidence            6

>d1c3ga1 b.4.1.1 (A:180-259) Heat shock protein 40 Sis1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: HSP40/DnaJ peptide-binding domain
superfamily: HSP40/DnaJ peptide-binding domain
family: HSP40/DnaJ peptide-binding domain
domain: Heat shock protein 40 Sis1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.72  E-value=6.7e-18  Score=129.38  Aligned_cols=80  Identities=20%  Similarity=0.410  Sum_probs=68.5

Q ss_pred             CcEEEEEEeehhhhhcCCeEEEEEeeeEeccCCCCCceeeCceeeeCCCCccccEEEEeeeCCCcceeeeecCCCCCccc
Q 017925           60 EDLRYDIVLEFSESIFGAEKEFELSHLETCEVCTGTGAKMGSKMRICSTCGGRGQVMRTDQTPFGLFSQVSVCPSCGGEG  139 (363)
Q Consensus        60 ~di~~~l~ltlee~~~G~~~~i~~~~~~~C~~C~GsG~~~g~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G  139 (363)
                      +|++++|.|||||+|+|+++++++.+.    .|+                 |.+                          
T Consensus         1 e~v~~~l~vtLee~~~G~~k~i~~~r~----~~~-----------------g~~--------------------------   33 (80)
T d1c3ga1           1 ETVQVNLPVSLEDLFVGKKKSFKIGRK----GPH-----------------GAS--------------------------   33 (80)
T ss_dssp             CEEEEEEEECHHHHHHTCEEEEEEEEE----ETT-----------------TEE--------------------------
T ss_pred             CCEEEEeEEEHHHHhCCCceEeeccee----ccc-----------------CCC--------------------------
Confidence            479999999999999999999987642    122                 111                          


Q ss_pred             EEeceeeeecCCCcEEeeceEEEEEeCCCCCCCcEEEEccCcCCCCCCCCCccEEEEEEEEecc
Q 017925          140 EVISEYCRKCSGEGRIRLKKNIKVKVPPGVSTGSILRVVGEGDAGPRGGPPGDLYVYLDVEEIP  203 (363)
Q Consensus       140 ~vi~~~C~~C~G~G~v~~~~~l~V~IP~Gv~~G~~irl~G~G~~~~~g~~~GDL~V~i~v~~h~  203 (363)
                                       +.++++|+||||+.+|++|+|+|+|++.+.++++|||||+|++++||
T Consensus        34 -----------------~~~~~~v~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDl~~~i~~~~HP   80 (80)
T d1c3ga1          34 -----------------EKTQIDIQLKPGWKAGTKITYKNQGDYNPQTGRRKTLQFVIQEKSHP   80 (80)
T ss_dssp             -----------------EEEEEEEECCTTCCTTCEEEESSCSSBCSSSSCBCEEEEEEEECCCS
T ss_pred             -----------------ceEEEEEEECCCCCCCcEEEECCccccCcCCCCCCCEEEEEEeCCCC
Confidence                             24679999999999999999999999988778899999999999997

>d1exka_ g.54.1.1 (A:) Cysteine-rich domain of the chaperone protein DnaJ {Escherichia coli [TaxId: 562]}

class: Small proteins
fold: DnaJ/Hsp40 cysteine-rich domain
superfamily: DnaJ/Hsp40 cysteine-rich domain
family: DnaJ/Hsp40 cysteine-rich domain
domain: Cysteine-rich domain of the chaperone protein DnaJ
species: Escherichia coli [TaxId: 562]

Probab=99.71  E-value=2.3e-18  Score=131.69  Aligned_cols=78  Identities=44%  Similarity=0.963  Sum_probs=70.8

Q ss_pred             CCeEEEEEeeeEeccCCCCCceeeCceeeeCCCCccccEEEEeeeCCCcceeeeecCCCCCcccEEeceeeeecCCCcEE
Q 017925           76 GAEKEFELSHLETCEVCTGTGAKMGSKMRICSTCGGRGQVMRTDQTPFGLFSQVSVCPSCGGEGEVISEYCRKCSGEGRI  155 (363)
Q Consensus        76 G~~~~i~~~~~~~C~~C~GsG~~~g~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~vi~~~C~~C~G~G~v  155 (363)
                      |++++|+|++.+.|+.|+|+|++++..+.+|+.|+|+|++..    .+|+|+++++|+.|+|+|++|.++|..|+|+|+|
T Consensus         1 G~~k~i~i~~~~~C~~C~G~G~~~g~~~~~C~~C~G~G~v~~----~~g~~~~~~~C~~C~G~G~~i~~~C~~C~G~G~v   76 (79)
T d1exka_           1 GVTKEIRIPTLEECDVCHGSGAKPGTQPQTCPTCHGSGQVQM----RQGFFAVQQTCPHCQGRGTLIKDPCNKCHGHGRV   76 (79)
T ss_dssp             CTTTSCCCCCEEECGGGTTTSBCSSSCCEECTTTTTSSEEEE----EETTEEEEEECTTTTTSSEECSSBCGGGTTSSEE
T ss_pred             CceEEEEeeeeccCCCCcCcccCCCccceeCCCccceeEEEE----ecccceeeEECcccCcceeECCCCCCCCCCceEe
Confidence            677889999999999999999999999999999999998743    3477888899999999999999999999999998


Q ss_pred             ee
Q 017925          156 RL  157 (363)
Q Consensus       156 ~~  157 (363)
                      ++
T Consensus        77 ~k   78 (79)
T d1exka_          77 ER   78 (79)
T ss_dssp             EC
T ss_pred             ec
Confidence            75

>d1nlta1 b.4.1.1 (A:110-138,A:213-257) Mitochondrial protein import protein mas5 (Hsp40, Ydj1), C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: HSP40/DnaJ peptide-binding domain
superfamily: HSP40/DnaJ peptide-binding domain
family: HSP40/DnaJ peptide-binding domain
domain: Mitochondrial protein import protein mas5 (Hsp40, Ydj1), C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.70  E-value=2.7e-17  Score=124.10  Aligned_cols=74  Identities=26%  Similarity=0.461  Sum_probs=66.4

Q ss_pred             CCCCCcEEEEEEeehhhhhcCCeEEEEEeeeEeccCCCCCceeeCceeeeCCCCccccEEEEeeeCCCcceeeeecCCCC
Q 017925           56 VTKGEDLRYDIVLEFSESIFGAEKEFELSHLETCEVCTGTGAKMGSKMRICSTCGGRGQVMRTDQTPFGLFSQVSVCPSC  135 (363)
Q Consensus        56 ~~~g~di~~~l~ltlee~~~G~~~~i~~~~~~~C~~C~GsG~~~g~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C  135 (363)
                      +++|+|++++|.|||+|||+|+++++.+.                                                   
T Consensus         1 Prkg~di~~~l~isleea~~G~~~~~~~~---------------------------------------------------   29 (74)
T d1nlta1           1 PQRGKDIKHEISASLEELYKGRTAKLALN---------------------------------------------------   29 (74)
T ss_dssp             CCBCCCEEEEEEECTTHHHHCEEEEEEEE---------------------------------------------------
T ss_pred             CCCCCCEEEEEEecHHHHHhhcccceeec---------------------------------------------------
Confidence            35789999999999999999999887553                                                   


Q ss_pred             CcccEEeceeeeecCCCcEEeeceEEEEEeCCCCCCCcEEEEccCcCCCCCCCCCccEEEEEEEEecc
Q 017925          136 GGEGEVISEYCRKCSGEGRIRLKKNIKVKVPPGVSTGSILRVVGEGDAGPRGGPPGDLYVYLDVEEIP  203 (363)
Q Consensus       136 ~G~G~vi~~~C~~C~G~G~v~~~~~l~V~IP~Gv~~G~~irl~G~G~~~~~g~~~GDL~V~i~v~~h~  203 (363)
                                            .++++|+||||+.+|++|+|+|+|++.+ ++.+|||||+|++++|+
T Consensus        30 ----------------------~~~~~i~Ip~G~~~G~~ir~~g~G~~~~-~~~~GDl~v~i~~~pHk   74 (74)
T d1nlta1          30 ----------------------RKILEVHVEPGMKDGQRIVFKGEADQAP-DVIPGDVVFIVSERPHK   74 (74)
T ss_dssp             ----------------------EEEEEEEECTTCCTTCEEEETTCSCCCT-TCBCCCEEEEEEECCCS
T ss_pred             ----------------------CccEEEEecccccCCeEEEecCCcCCCC-CCCCCCEEEEEEecCCC
Confidence                                  2468999999999999999999999987 67899999999999995

>d1nlta3 g.54.1.1 (A:139-212) Mitochondrial protein import protein mas5 (Hsp40, Ydj1), insert domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: DnaJ/Hsp40 cysteine-rich domain
superfamily: DnaJ/Hsp40 cysteine-rich domain
family: DnaJ/Hsp40 cysteine-rich domain
domain: Mitochondrial protein import protein mas5 (Hsp40, Ydj1), insert domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.59  E-value=4.7e-16  Score=117.19  Aligned_cols=72  Identities=28%  Similarity=0.652  Sum_probs=64.1

Q ss_pred             eeEeccCCCCCceeeCceeeeCCCCccccEEEEeeeCCCcceeeeecCCCCCcccEEec--eeeeecCCCcEEee
Q 017925           85 HLETCEVCTGTGAKMGSKMRICSTCGGRGQVMRTDQTPFGLFSQVSVCPSCGGEGEVIS--EYCRKCSGEGRIRL  157 (363)
Q Consensus        85 ~~~~C~~C~GsG~~~g~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~vi~--~~C~~C~G~G~v~~  157 (363)
                      +.++|+.|+|+|+++++ ..+|+.|+|+|+++..++++++++++..+|+.|+|+|++|.  ++|+.|+|.|.+++
T Consensus         1 r~v~C~~C~G~G~~~~~-~~~C~~C~G~G~~~~~~~~g~~~~~~~~~C~~C~G~G~~i~~~~~C~~C~G~g~v~E   74 (74)
T d1nlta3           1 KQILCKECEGRGGKKGA-VKKCTSCNGQGIKFVTRQMGPMIQRFQTECDVCHGTGDIIDPKDRCKSCNGKKVENE   74 (74)
T ss_dssp             EEEECTTTTTCSBSTTT-CCCCTTSSSSSCEEEEEESSSEEEEEECSCTTCSSSSSCCCTTSBCSSSTTSCEEEE
T ss_pred             CccCCcCCcccccCCCC-CCCCCCCcceeeeeEEEEecCcEEEEEEECccCccceEEeCCCCCCCCCCCeeEeCC
Confidence            46899999999999875 57899999999999999998877777799999999999874  68999999998864

>d1nlta1 b.4.1.1 (A:110-138,A:213-257) Mitochondrial protein import protein mas5 (Hsp40, Ydj1), C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: HSP40/DnaJ peptide-binding domain
superfamily: HSP40/DnaJ peptide-binding domain
family: HSP40/DnaJ peptide-binding domain
domain: Mitochondrial protein import protein mas5 (Hsp40, Ydj1), C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.41  E-value=1.1e-13  Score=103.96  Aligned_cols=70  Identities=27%  Similarity=0.384  Sum_probs=63.9

Q ss_pred             cCCcceeEEEEeceEEeecCcEEEEeccCceEEEecCCCCCCCcEEEEccCCCCCCCCCCCCccEEEEEEEE
Q 017925          207 RDGIDLFSTISISYLDAIMGTVVKVKTVEGISELQVPPGTQPGDVLVLAKKGAPKLNKPSIRGDHLFTVKVT  278 (363)
Q Consensus       207 R~G~DL~~~~~I~l~eAllG~~~~v~tldG~~~l~ip~gtq~g~~~~l~g~G~P~~~~~~~rGDL~V~~~V~  278 (363)
                      |+|.||+++++|||.||++|++++|.+..+.+.|+||+|+++|++++++|+|.+..+  ..+|||||+|++.
T Consensus         2 rkg~di~~~l~isleea~~G~~~~~~~~~~~~~i~Ip~G~~~G~~ir~~g~G~~~~~--~~~GDl~v~i~~~   71 (74)
T d1nlta1           2 QRGKDIKHEISASLEELYKGRTAKLALNRKILEVHVEPGMKDGQRIVFKGEADQAPD--VIPGDVVFIVSER   71 (74)
T ss_dssp             CBCCCEEEEEEECTTHHHHCEEEEEEEEEEEEEEEECTTCCTTCEEEETTCSCCCTT--CBCCCEEEEEEEC
T ss_pred             CCCCCEEEEEEecHHHHHhhcccceeecCccEEEEecccccCCeEEEecCCcCCCCC--CCCCCEEEEEEec
Confidence            689999999999999999999999998777789999999999999999999998653  3579999999974

>d1c3ga2 b.4.1.1 (A:260-349) Heat shock protein 40 Sis1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: HSP40/DnaJ peptide-binding domain
superfamily: HSP40/DnaJ peptide-binding domain
family: HSP40/DnaJ peptide-binding domain
domain: Heat shock protein 40 Sis1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.05  E-value=6.2e-11  Score=91.86  Aligned_cols=81  Identities=22%  Similarity=0.341  Sum_probs=66.5

Q ss_pred             CCCCcEEEEEEeehhhhhcCCeEEEEEeeeEeccCCCCCceeeCceeeeCCCCccccEEEEeeeCCCcceeeeecCCCCC
Q 017925           57 TKGEDLRYDIVLEFSESIFGAEKEFELSHLETCEVCTGTGAKMGSKMRICSTCGGRGQVMRTDQTPFGLFSQVSVCPSCG  136 (363)
Q Consensus        57 ~~g~di~~~l~ltlee~~~G~~~~i~~~~~~~C~~C~GsG~~~g~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~  136 (363)
                      |+|.|+.+++.|+|.||+.|++++|..-                                                    
T Consensus         4 R~G~DL~~~~~I~~~eal~G~~~~i~~~----------------------------------------------------   31 (90)
T d1c3ga2           4 RDGDDLIYTLPLSFKESLLGFSKTIQTI----------------------------------------------------   31 (90)
T ss_dssp             EETTEEEEEECCBHHHHHHCEEEEEECS----------------------------------------------------
T ss_pred             EeCCeEEEEEEeCHHHHhcCCeEEEecc----------------------------------------------------
Confidence            4689999999999999999998776421                                                    


Q ss_pred             cccEEeceeeeecCCCcEEeeceEEEEEeCCCCCCCcEEEEccCcCCCCC-CCCCccEEEEEEEEeccccccCC
Q 017925          137 GEGEVISEYCRKCSGEGRIRLKKNIKVKVPPGVSTGSILRVVGEGDAGPR-GGPPGDLYVYLDVEEIPGIQRDG  209 (363)
Q Consensus       137 G~G~vi~~~C~~C~G~G~v~~~~~l~V~IP~Gv~~G~~irl~G~G~~~~~-g~~~GDL~V~i~v~~h~~f~R~G  209 (363)
                                          ..++++|+||+|+++|++++++|+|++... .+..|||||+|+|..+..++.+.
T Consensus        32 --------------------dG~~i~i~ip~~~~~g~~~~i~g~G~p~~~~~~~rGdL~V~~~v~~P~~ls~~q   85 (90)
T d1c3ga2          32 --------------------DGRTLPLSRVQPVQPSQTSTYPGQGMPTPKNPSQRGNLIVKYKVDYPISLNDAQ   85 (90)
T ss_dssp             --------------------SSCEEEEEESSCCCTTCEEECTTCSCBCSSCTTSBCCEEEEECCBCCSSCCTTH
T ss_pred             --------------------cccceecccccccccccccccCCCCCCcCCCCCCcCCEEEEEEEEcCCCCCHHH
Confidence                                025788999999999999999999997543 35679999999999777665443

>d1nlta2 b.4.1.1 (A:258-337) Mitochondrial protein import protein mas5 (Hsp40, Ydj1), C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: HSP40/DnaJ peptide-binding domain
superfamily: HSP40/DnaJ peptide-binding domain
family: HSP40/DnaJ peptide-binding domain
domain: Mitochondrial protein import protein mas5 (Hsp40, Ydj1), C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.04  E-value=1.6e-10  Score=87.48  Aligned_cols=74  Identities=26%  Similarity=0.447  Sum_probs=62.0

Q ss_pred             CCCCcEEEEEEeehhhhhcCCeEEEEEeeeEeccCCCCCceeeCceeeeCCCCccccEEEEeeeCCCcceeeeecCCCCC
Q 017925           57 TKGEDLRYDIVLEFSESIFGAEKEFELSHLETCEVCTGTGAKMGSKMRICSTCGGRGQVMRTDQTPFGLFSQVSVCPSCG  136 (363)
Q Consensus        57 ~~g~di~~~l~ltlee~~~G~~~~i~~~~~~~C~~C~GsG~~~g~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~  136 (363)
                      ++|.|+.++++|+|.||+.|++++|...                                                    
T Consensus         4 R~G~dL~~~~~I~~~eal~G~~~~i~~~----------------------------------------------------   31 (80)
T d1nlta2           4 RDGDDLVYEAEIDLLTAIAGGEFALEHV----------------------------------------------------   31 (80)
T ss_dssp             EETTEEEEEEEEEHHHHHHCBCCEEECS----------------------------------------------------
T ss_pred             EeCCEEEEEEEeCHHHHhCCCEEEEEec----------------------------------------------------
Confidence            4689999999999999999998776421                                                    


Q ss_pred             cccEEeceeeeecCCCcEEeeceEEEEEeCCC--CCCCcEEEEccCcCCCCCCCCCccEEEEEEEEec
Q 017925          137 GEGEVISEYCRKCSGEGRIRLKKNIKVKVPPG--VSTGSILRVVGEGDAGPRGGPPGDLYVYLDVEEI  202 (363)
Q Consensus       137 G~G~vi~~~C~~C~G~G~v~~~~~l~V~IP~G--v~~G~~irl~G~G~~~~~g~~~GDL~V~i~v~~h  202 (363)
                                          ..+.++|+||++  +++|++++++|+|++...++..|||||+|+|+.+
T Consensus        32 --------------------dg~~~~i~i~~~~~~~~g~~~~i~g~G~p~~~~~~~GDL~v~~~V~~P   79 (80)
T d1nlta2          32 --------------------SGDWLKVGIVPGEVIAPGMRKVIEGKGMPIPKYGGYGNLIIKFTIKDP   79 (80)
T ss_dssp             --------------------SSCEEECCBCTTTTCSTTCEEEETTCSCBCSSSCSBCCEEEEEEEECC
T ss_pred             --------------------CcceEEEEeCCCCCcCCCCEEEecCCCCCCCCcCCcCcEEEEEEEEcC
Confidence                                024677788877  9999999999999987777788999999999754

>d1c3ga1 b.4.1.1 (A:180-259) Heat shock protein 40 Sis1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: HSP40/DnaJ peptide-binding domain
superfamily: HSP40/DnaJ peptide-binding domain
family: HSP40/DnaJ peptide-binding domain
domain: Heat shock protein 40 Sis1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.72  E-value=7.3e-09  Score=78.06  Aligned_cols=68  Identities=18%  Similarity=0.285  Sum_probs=56.2

Q ss_pred             cceeEEEEeceEEeecCcEEEEe----ccCce-----EEEecCCCCCCCcEEEEccCCCCCCCCCCCCccEEEEEEEE
Q 017925          210 IDLFSTISISYLDAIMGTVVKVK----TVEGI-----SELQVPPGTQPGDVLVLAKKGAPKLNKPSIRGDHLFTVKVT  278 (363)
Q Consensus       210 ~DL~~~~~I~l~eAllG~~~~v~----tldG~-----~~l~ip~gtq~g~~~~l~g~G~P~~~~~~~rGDL~V~~~V~  278 (363)
                      +||...++|||-||..|++.+|.    ..++.     +.|+||||+++|++++++|+|....+. +.+|||||+|++.
T Consensus         1 e~v~~~l~vtLee~~~G~~k~i~~~r~~~~g~~~~~~~~v~Ip~G~~~G~~i~~~g~G~~~~~~-~~~GDl~~~i~~~   77 (80)
T d1c3ga1           1 ETVQVNLPVSLEDLFVGKKKSFKIGRKGPHGASEKTQIDIQLKPGWKAGTKITYKNQGDYNPQT-GRRKTLQFVIQEK   77 (80)
T ss_dssp             CEEEEEEEECHHHHHHTCEEEEEEEEEETTTEEEEEEEEEECCTTCCTTCEEEESSCSSBCSSS-SCBCEEEEEEEEC
T ss_pred             CCEEEEeEEEHHHHhCCCceEeecceecccCCCceEEEEEEECCCCCCCcEEEECCccccCcCC-CCCCCEEEEEEeC
Confidence            47899999999999999977664    33442     479999999999999999999876543 3579999999875

>d1exka_ g.54.1.1 (A:) Cysteine-rich domain of the chaperone protein DnaJ {Escherichia coli [TaxId: 562]}

class: Small proteins
fold: DnaJ/Hsp40 cysteine-rich domain
superfamily: DnaJ/Hsp40 cysteine-rich domain
family: DnaJ/Hsp40 cysteine-rich domain
domain: Cysteine-rich domain of the chaperone protein DnaJ
species: Escherichia coli [TaxId: 562]

Probab=98.02  E-value=1.1e-06  Score=65.59  Aligned_cols=47  Identities=32%  Similarity=0.808  Sum_probs=38.2

Q ss_pred             eeEeccCCCCCceeeC-----ceeeeCCCCccccEEEEeeeCCCcceeeeecCCCCCcccEEec
Q 017925           85 HLETCEVCTGTGAKMG-----SKMRICSTCGGRGQVMRTDQTPFGLFSQVSVCPSCGGEGEVIS  143 (363)
Q Consensus        85 ~~~~C~~C~GsG~~~g-----~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~vi~  143 (363)
                      ....|+.|+|+|....     ....+|+.|+|+|+++.            .+|+.|+|+|.|.+
T Consensus        27 ~~~~C~~C~G~G~v~~~~g~~~~~~~C~~C~G~G~~i~------------~~C~~C~G~G~v~k   78 (79)
T d1exka_          27 QPQTCPTCHGSGQVQMRQGFFAVQQTCPHCQGRGTLIK------------DPCNKCHGHGRVER   78 (79)
T ss_dssp             CCEECTTTTTSSEEEEEETTEEEEEECTTTTTSSEECS------------SBCGGGTTSSEEEC
T ss_pred             cceeCCCccceeEEEEecccceeeEECcccCcceeECC------------CCCCCCCCceEeec
Confidence            3568999999997632     25678999999999854            68999999999864

>d1m1qa_ a.138.1.3 (A:) Flavocytochrome c3 (respiratory fumarate reductase), N-terminal domain {Shewanella oneidensis [TaxId: 70863]}

class: All alpha proteins
fold: Multiheme cytochromes
superfamily: Multiheme cytochromes
family: Di-heme elbow motif
domain: Flavocytochrome c3 (respiratory fumarate reductase), N-terminal domain
species: Shewanella oneidensis [TaxId: 70863]

Probab=97.67  E-value=2.6e-07  Score=70.47  Aligned_cols=69  Identities=20%  Similarity=0.434  Sum_probs=55.1

Q ss_pred             eccCCCCCceeeCc---eeeeCCCCccccEEEEeeeCCCcceeeeecCCCCCcccEEeceeeeecCCCcEEe
Q 017925           88 TCEVCTGTGAKMGS---KMRICSTCGGRGQVMRTDQTPFGLFSQVSVCPSCGGEGEVISEYCRKCSGEGRIR  156 (363)
Q Consensus        88 ~C~~C~GsG~~~g~---~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~vi~~~C~~C~G~G~v~  156 (363)
                      .|..|++.|.....   ...+|..|+|.+.......+..+.+++-..|..|+|.+..+.+.|..|++.|++.
T Consensus        13 ~C~~CH~~~~~~~~~~~~~~~C~~CHg~~~~~~~~~~~h~~~~~c~~CH~~H~~~~~~~~~C~~CH~~gr~~   84 (90)
T d1m1qa_          13 GCESCHKDGTPSADGAFEFAQCQSCHGKLSEMDAVHKPHDGNLVCADCHAVHDMNVGQKPTCESCHDDGRTS   84 (90)
T ss_dssp             CGGGTSGGGCCCSSSHHHHHHHHHHHCCGGGSCTTTGGGTTTCCGGGTCCTTTSBTTCCCCSTTTCSSCCCH
T ss_pred             CCCCcCCCCccccCCCCCCCcCcccCCCceeEeeccccccCccccccCccccCCCCcCCCccccccCCCccc
Confidence            69999999875433   3468999999998655555555566666899999999999999999999998653

>d1nlta3 g.54.1.1 (A:139-212) Mitochondrial protein import protein mas5 (Hsp40, Ydj1), insert domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: DnaJ/Hsp40 cysteine-rich domain
superfamily: DnaJ/Hsp40 cysteine-rich domain
family: DnaJ/Hsp40 cysteine-rich domain
domain: Mitochondrial protein import protein mas5 (Hsp40, Ydj1), insert domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=97.63  E-value=6.9e-06  Score=60.41  Aligned_cols=46  Identities=28%  Similarity=0.678  Sum_probs=35.3

Q ss_pred             EeccCCCCCceeeC---------ceeeeCCCCccccEEEEeeeCCCcceeeeecCCCCCcccEEe
Q 017925           87 ETCEVCTGTGAKMG---------SKMRICSTCGGRGQVMRTDQTPFGLFSQVSVCPSCGGEGEVI  142 (363)
Q Consensus        87 ~~C~~C~GsG~~~g---------~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~vi  142 (363)
                      ..|+.|+|+|....         ....+|+.|+|+|+++..          ..+|+.|+|.|.+.
T Consensus        19 ~~C~~C~G~G~~~~~~~~g~~~~~~~~~C~~C~G~G~~i~~----------~~~C~~C~G~g~v~   73 (74)
T d1nlta3          19 KKCTSCNGQGIKFVTRQMGPMIQRFQTECDVCHGTGDIIDP----------KDRCKSCNGKKVEN   73 (74)
T ss_dssp             CCCTTSSSSSCEEEEEESSSEEEEEECSCTTCSSSSSCCCT----------TSBCSSSTTSCEEE
T ss_pred             CCCCCCcceeeeeEEEEecCcEEEEEEECccCccceEEeCC----------CCCCCCCCCeeEeC
Confidence            46999999997642         145679999999986532          15899999999763

>d1m1qa_ a.138.1.3 (A:) Flavocytochrome c3 (respiratory fumarate reductase), N-terminal domain {Shewanella oneidensis [TaxId: 70863]}

class: All alpha proteins
fold: Multiheme cytochromes
superfamily: Multiheme cytochromes
family: Di-heme elbow motif
domain: Flavocytochrome c3 (respiratory fumarate reductase), N-terminal domain
species: Shewanella oneidensis [TaxId: 70863]

Probab=83.12  E-value=0.045  Score=40.14  Aligned_cols=44  Identities=20%  Similarity=0.465  Sum_probs=31.1

Q ss_pred             EeccCCCCCceeeC---------ceeeeCCCCccccEEEEeeeCCCcceeeeecCCCCCcccEEe
Q 017925           87 ETCEVCTGTGAKMG---------SKMRICSTCGGRGQVMRTDQTPFGLFSQVSVCPSCGGEGEVI  142 (363)
Q Consensus        87 ~~C~~C~GsG~~~g---------~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~vi  142 (363)
                      ..|..|+|++....         ..-..|..|+|.|..+.            ..|..|++.|++.
T Consensus        32 ~~C~~CHg~~~~~~~~~~~h~~~~~c~~CH~~H~~~~~~~------------~~C~~CH~~gr~~   84 (90)
T d1m1qa_          32 AQCQSCHGKLSEMDAVHKPHDGNLVCADCHAVHDMNVGQK------------PTCESCHDDGRTS   84 (90)
T ss_dssp             HHHHHHHCCGGGSCTTTGGGTTTCCGGGTCCTTTSBTTCC------------CCSTTTCSSCCCH
T ss_pred             CcCcccCCCceeEeeccccccCccccccCccccCCCCcCC------------CccccccCCCccc
Confidence            47999999997642         12356777777764322            6899999998753