Citrus Sinensis ID: 017959

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360---
MAPSLEDGDSLFNFVVQDGNGVKGMVDLGLSKVPQPYIQPQEERIDKKNASICAQAPIDLSKLDGPNHEEVARQIARASETLGFFQVVNHGVPVELLESLKDAAHAFFNQTPGKKAVYRKGVSPSPLVKYGTSFVPEKEKALEWKDYISMVYTNDAEALQQWPKECNIVALEYLRTSMKMVRKLLEVLFKNLGVTLDEPELDAIIGFKMVNMNFYPTCPNPELTVGVGRHSDMGALTILLQDGIGGLYVKVEEDIPDVGKKGEWMEIPPVPGALVINVGDTLQILSNGRYKSAEHRVRTTSSKSRVSIPIFTMPKPTVKIGPLPQLVEKEGSRFREFLFQDYRNNFFSNAHDGKKSLDFARAI
cccccccccccccHHccccccHHHHHHccccccccccccccccccccccccccccccEEccccccccHHHHHHHHHHHHHHccEEEEEcccccHHHHHHHHHHHHHHHcccHHHHHccccccccccEEEEEcccccccccccccEEEEEEEEcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccEEEEcccccccccccccccccccccccccEEEEccccccEEEEEEcccccccccccEEEcccccccEEEEEccEEEEEEcccccccccEEcccccccEEEEEEEEccccccEEEcccccccccccccccccHHHHHHHHHHccccccccccccccc
ccccccccHHHHHHHcccccHHHHHHHccccccccHcEccccccccccccccccccEEEccccccccHHHHHHHHHHHHHHcccEEEEcccccHHHHHHHHHHHHHHHcccHHHHHHHHcccccccEEEEcccccccccccccHHHHEEEEccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHcccccEEEEEccccccccccEEccccccccccEEEEEccccccEEEEEEccccccccccEEEEcccccccEEEEEcHHHHHHcccccccccEEEcccccccEEEEEEEEEcccccEccccHHHccccccccccccHHHHHHHHHHcccccccHHHHHHcc
mapsledgdSLFNFVVQdgngvkgmvdlglskvpqpyiqpqeeridkknasicaqapidlskldgpnhEEVARQIARASETLGFFQVVNHGVPVELLESLKDAAHAFfnqtpgkkavyrkgvspsplvkygtsfvpekekaLEWKDYISMVYTNDAEALQQWPKECNIVALEYLRTSMKMVRKLLEVLFKNlgvtldepeldaIIGFKMvnmnfyptcpnpeltvgvgrhsdmGALTILLQDGigglyvkveedipdvgkkgewmeippvpgalvinvgdtlqilsngryksaehrvrttssksrvsipiftmpkptvkigplpqlveKEGSRFREFLFQDYrnnffsnahdgkksLDFARAI
MAPSLEDGDSLFNFVVQDGNGVKGMVDLGLSKVPQPYIQPQEERIDKKNASICAQApidlskldgpNHEEVARQIARASETLGFFQVVNHGVPVELLESLKDAAHAFFNqtpgkkavyrkgvspsplvkygtsfvpekekaLEWKDYISMVYTNDAEALQQWPKECNIVALEYLRTSMKMVRKLLEVLFKNLGVTLDEPELDAIIGFKMVNMNFYPTCPNPELTVGVGRHSDMGALTILLQDGIGGLYVKVEEDIPDVGKKGEWMEIPPVPGALVINVGDTLQILSNgryksaehrvrttssksrvsipiftmpkptvkigplPQLVEKEGSRFREFLFQDYRNnffsnahdgkkSLDFARAI
MAPSLEDGDSLFNFVVQDGNGVKGMVDLGLSKVPQPYIQPQEERIDKKNASICAQAPIDLSKLDGPNHEEVARQIARASETLGFFQVVNHGVPVELLESLKDAAHAFFNQTPGKKAVYRKGVSPSPLVKYGTSFVPEKEKALEWKDYISMVYTNDAEALQQWPKECNIVALEYLRTSMKMVRKLLEVLFKNLGVTLDEPELDAIIGFKMVNMNFYPTCPNPELTVGVGRHSDMGALTILLQDGIGGLYVKVEEDIPDVGKKGEWMEIPPVPGALVINVGDTLQILSNGRYKSAEHrvrttssksrvsIPIFTMPKPTVKIGPLPQLVEKEGSRFREFLFQDYRNNFFSNAHDGKKSLDFARAI
**********LFNFVVQDGNGVKGMVDLGLSKV*******************C*******************RQIARASETLGFFQVVNHGVPVELLESLKDAAHAFFNQTPGKKAVYRKGVSPSPLVKYGTSFVPEKEKALEWKDYISMVYTNDAEALQQWPKECNIVALEYLRTSMKMVRKLLEVLFKNLGVTLDEPELDAIIGFKMVNMNFYPTCPNPELTVGVGRHSDMGALTILLQDGIGGLYVKVEEDIPDVGKKGEWMEIPPVPGALVINVGDTLQILSNGRY*****************IPIFTMPKPTVKIGPLPQLVEKEGSRFREFLFQDYRNNFFS***************
*********SLFNFVVQDGNGVKGMVDLGLSKVPQPYIQP**************QAPIDLSKLDGPNHEEVARQIARASETLGFFQVVNHGVPVELLESLKDAAHAFFNQTPGKKAVYR**V***P**KYGTSFVPEKEKALEWKDYISMVYTNDAEALQQWPKECNIVALEYLRTSMKMVRKLLEVLFKNLGVTLDEPELDAIIGFKMVNMNFYPTCPNPELTVGVGRHSDMGALTILLQDGIGGLYVKVEEDIPDVGKKGEWMEIPPVPGALVINVGDTLQILSNGRYKSAEHRVRTTSSKSRVSIPIFTMPKPTVKIGPLPQLVEKEGSRFREFLFQDYRNNFFSNAHDGKKSLDFARAI
********DSLFNFVVQDGNGVKGMVDLGLSKVPQPYIQPQEERIDKKNASICAQAPIDLSKLDGPNHEEVARQIARASETLGFFQVVNHGVPVELLESLKDAAHAFFNQTPGKKAVYRKGVSPSPLVKYGTSFVPEKEKALEWKDYISMVYTNDAEALQQWPKECNIVALEYLRTSMKMVRKLLEVLFKNLGVTLDEPELDAIIGFKMVNMNFYPTCPNPELTVGVGRHSDMGALTILLQDGIGGLYVKVEEDIPDVGKKGEWMEIPPVPGALVINVGDTLQILSNGR***************RVSIPIFTMPKPTVKIGPLPQLVEKEGSRFREFLFQDYRNNFFSNAHDGKKSLDFARAI
******DGDSLFNFVVQDGNGVKGMVDLGLSKVPQPYIQPQEERIDKKNASICAQAPIDLSKLDGPNHEEVARQIARASETLGFFQVVNHGVPVELLESLKDAAHAFFNQTPGKKAVYRKGVSPSPLVKYGTSFVPEKEKALEWKDYISMVYTNDAEALQQWPKECNIVALEYLRTSMKMVRKLLEVLFKNLGVTLDEPELDAIIGFKMVNMNFYPTCPNPELTVGVGRHSDMGALTILLQDGIGGLYVKVEEDIPDVGKKGEWMEIPPVPGALVINVGDTLQILSNGRYKSAEHRVRTTSSKSRVSIPIFTMPKPTVKIGPLPQLVEKEGSRFREFLFQDYRNNFFSNAHDGKKSLDFARAI
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MAPSLEDGDSLFNFVVQDGNGVKGMVDLGLSKVPQPYIQPQEERIDKKNASICAQAPIDLSKLDGPNHEEVARQIARASETLGFFQVVNHGVPVELLESLKDAAHAFFNQTPGKKAVYRKGVSPSPLVKYGTSFVPEKEKALEWKDYISMVYTNDAEALQQWPKECNIVALEYLRTSMKMVRKLLEVLFKNLGVTLDEPELDAIIGFKMVNMNFYPTCPNPELTVGVGRHSDMGALTILLQDGIGGLYVKVEEDIPDVGKKGEWMEIPPVPGALVINVGDTLQILSNGRYKSAEHRVRTTSSKSRVSIPIFTMPKPTVKIGPLPQLVEKEGSRFREFLFQDYRNNFFSNAHDGKKSLDFARAI
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query363 2.2.26 [Sep-21-2011]
Q9LHN8361 Feruloyl CoA ortho-hydrox no no 0.972 0.977 0.478 7e-93
Q9C899361 Feruloyl CoA ortho-hydrox no no 0.964 0.969 0.471 9e-92
Q9LTH8364 1-aminocyclopropane-1-car no no 0.909 0.906 0.315 1e-47
Q43383398 1-aminocyclopropane-1-car no no 0.887 0.809 0.333 3e-46
Q84MB3365 1-aminocyclopropane-1-car no no 0.942 0.936 0.314 2e-45
Q9LSW6362 1-aminocyclopropane-1-car no no 0.909 0.911 0.315 2e-44
P93824360 1-aminocyclopropane-1-car no no 0.900 0.908 0.314 3e-44
Q9LTH7366 1-aminocyclopropane-1-car no no 0.909 0.901 0.314 4e-44
Q9C5K7369 1-aminocyclopropane-1-car no no 0.936 0.921 0.325 1e-43
O04847401 Deacetoxyvindoline 4-hydr N/A no 0.892 0.807 0.316 2e-43
>sp|Q9LHN8|F6H1_ARATH Feruloyl CoA ortho-hydroxylase 1 OS=Arabidopsis thaliana GN=F6'H1 PE=1 SV=1 Back     alignment and function desciption
 Score =  340 bits (873), Expect = 7e-93,   Method: Compositional matrix adjust.
 Identities = 176/368 (47%), Positives = 239/368 (64%), Gaps = 15/368 (4%)

Query: 1   MAPSL-----EDGDSLFNFVVQDGNGVKGMVDLGLSKVPQPYIQPQEERIDKKNASICAQ 55
           MAP+L      +   + +FVV  GNGVKG+ + G+  +P+ YIQP EER+  K  +   +
Sbjct: 1   MAPTLLTTQFSNPAEVTDFVVYKGNGVKGLSETGIKALPEQYIQPLEERLINKFVNETDE 60

Query: 56  APIDLSKLDGPNHEEVARQIARASETLGFFQVVNHGVPVELLESLKDAAHAFFNQTPGKK 115
           A I +  +  P+ + VA  +  A+E  GFFQV+NHGVP+E+L+ +K A H FFN    +K
Sbjct: 61  A-IPVIDMSNPDEDRVAEAVCDAAEKWGFFQVINHGVPLEVLDDVKAATHKFFNLPVEEK 119

Query: 116 AVYRKGVSPSPLVKYGTSFVPEKEKALEWKDYISMVYTNDAEALQQWPKECNIVALEYLR 175
             + K  S S  V++GTSF P  E+ALEWKDY+S+ + ++AEA Q WP  C    LEY+ 
Sbjct: 120 RKFTKENSLSTTVRFGTSFSPLAEQALEWKDYLSLFFVSEAEAEQFWPDICRNETLEYIN 179

Query: 176 TSMKMVRKLLEVLFKNLGVT-LDEPELDAIIGFKMVNMNFYPTCPNPELTVGVGRHSDMG 234
            S KMVR+LLE L KNL V  LDE +    +G   VN+N+YP CPNP+LTVGVGRHSD+ 
Sbjct: 180 KSKKMVRRLLEYLGKNLNVKELDETKESLFMGSIRVNLNYYPICPNPDLTVGVGRHSDVS 239

Query: 235 ALTILLQDGIGGLYVKVEEDIPDVGKKGEWMEIPPVPGALVINVGDTLQILSNGRYKSAE 294
           +LTILLQD IGGL+V+           G W+ +PPV G+ VIN+GD +QI+SNG YKS E
Sbjct: 240 SLTILLQDQIGGLHVRSL-------ASGNWVHVPPVAGSFVINIGDAMQIMSNGLYKSVE 292

Query: 295 HRVRTTSSKSRVSIPIFTMPKPTVKIGPLPQLVEK-EGSRFREFLFQDYRNNFFSNAHDG 353
           HRV      +R+S+PIF  PKP   IGPLP+++   E   +R+ L+ DY   FF  AHDG
Sbjct: 293 HRVLANGYNNRISVPIFVNPKPESVIGPLPEVIANGEEPIYRDVLYSDYVKYFFRKAHDG 352

Query: 354 KKSLDFAR 361
           KK++D+A+
Sbjct: 353 KKTVDYAK 360
2-oxoglutarate (OG)- and Fe(II)-dependent dioxygenase (2OGD)involved in scopoletin biosynthesis. Converts feruloyl CoA into 6'-hydroxyferuloyl CoA but has no activity with ferulic acid, feruloylquinic acid, caffeic acid, caffeoyl CoA, p-coumaric acid, cinnamic acid, cinnamoyl CoA or benzoyl CoA.
Arabidopsis thaliana (taxid: 3702)
EC: 1EC: .EC: 1EC: 4EC: .EC: 1EC: 1EC: .EC: -
>sp|Q9C899|F6H2_ARATH Feruloyl CoA ortho-hydroxylase 2 OS=Arabidopsis thaliana GN=F6'H2 PE=1 SV=1 Back     alignment and function description
>sp|Q9LTH8|ACH11_ARATH 1-aminocyclopropane-1-carboxylate oxidase homolog 11 OS=Arabidopsis thaliana GN=At5g59530 PE=2 SV=1 Back     alignment and function description
>sp|Q43383|ACCH5_ARATH 1-aminocyclopropane-1-carboxylate oxidase homolog 5 OS=Arabidopsis thaliana GN=2A6 PE=2 SV=2 Back     alignment and function description
>sp|Q84MB3|ACCH1_ARATH 1-aminocyclopropane-1-carboxylate oxidase homolog 1 OS=Arabidopsis thaliana GN=At1g06620 PE=2 SV=1 Back     alignment and function description
>sp|Q9LSW6|ACH10_ARATH 1-aminocyclopropane-1-carboxylate oxidase homolog 10 OS=Arabidopsis thaliana GN=At5g43450 PE=2 SV=1 Back     alignment and function description
>sp|P93824|ACCH6_ARATH 1-aminocyclopropane-1-carboxylate oxidase homolog 6 OS=Arabidopsis thaliana GN=At1g04350 PE=2 SV=1 Back     alignment and function description
>sp|Q9LTH7|ACH12_ARATH 1-aminocyclopropane-1-carboxylate oxidase homolog 12 OS=Arabidopsis thaliana GN=At5g59540 PE=2 SV=1 Back     alignment and function description
>sp|Q9C5K7|ACCH2_ARATH 1-aminocyclopropane-1-carboxylate oxidase homolog 2 OS=Arabidopsis thaliana GN=At1g06640 PE=2 SV=1 Back     alignment and function description
>sp|O04847|DV4H_CATRO Deacetoxyvindoline 4-hydroxylase OS=Catharanthus roseus GN=D4H PE=1 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query363
224081447366 predicted protein [Populus trichocarpa] 0.997 0.989 0.763 1e-164
255544670 677 leucoanthocyanidin dioxygenase, putative 0.972 0.521 0.775 1e-161
147861098366 hypothetical protein VITISV_011327 [Viti 0.994 0.986 0.740 1e-159
296083508366 unnamed protein product [Vitis vinifera] 0.994 0.986 0.734 1e-159
359497230 638 PREDICTED: LOW QUALITY PROTEIN: 1-aminoc 0.994 0.565 0.732 1e-158
296083512366 unnamed protein product [Vitis vinifera] 0.994 0.986 0.732 1e-158
296082730 485 unnamed protein product [Vitis vinifera] 1.0 0.748 0.726 1e-156
359494539 479 PREDICTED: 1-aminocyclopropane-1-carboxy 0.977 0.741 0.738 1e-156
363807822362 uncharacterized protein LOC100803722 [Gl 0.988 0.991 0.707 1e-151
388503850367 unknown [Lotus japonicus] 0.988 0.978 0.687 1e-147
>gi|224081447|ref|XP_002306414.1| predicted protein [Populus trichocarpa] gi|222855863|gb|EEE93410.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  582 bits (1501), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 278/364 (76%), Positives = 324/364 (89%), Gaps = 2/364 (0%)

Query: 1   MAPSLEDGDSLFNFVVQDGNGVKGMVDLGLSKVPQPYIQPQEERIDKKNASICAQAPIDL 60
           MAPS  DG+S+FNFVV+DGNGVKGMVD GLS+VP+ Y+QP EERIDK NA+     PIDL
Sbjct: 1   MAPSFLDGNSMFNFVVRDGNGVKGMVDFGLSEVPEQYVQPPEERIDKLNATAHDNPPIDL 60

Query: 61  SKLDGPNHEEVARQIARASETLGFFQVVNHGVPVELLESLKDAAHAFFNQTPGKKAVYRK 120
           SKLDGP+H+++  +IA A+ETLGFFQV+NHGVPVELLESLKDAA+ FF Q P KKAVYRK
Sbjct: 61  SKLDGPDHDQIVEEIATAAETLGFFQVMNHGVPVELLESLKDAANNFFGQPPEKKAVYRK 120

Query: 121 GVSPSPLVKYGTSFVPEKEKALEWKDYISMVYTNDAEALQQWPKECNIVALEYLRTSMKM 180
           GVSPSP V+YGTSFVP+KEKALEWKDYISM YT DAEAL+ WP+EC  VALEYLRTS+KM
Sbjct: 121 GVSPSPSVRYGTSFVPDKEKALEWKDYISMRYTTDAEALEYWPQECKDVALEYLRTSIKM 180

Query: 181 VRKLLEVLFKNLGVTLDEPELDAIIGFKMVNMNFYPTCPNPELTVGVGRHSDMGALTILL 240
           VRK+LE+L   LGVTLD+ ++D +IG K+VNMNFYPTCPNPELTVGVGRHSDMG LT+LL
Sbjct: 181 VRKVLEILIGKLGVTLDDSKIDGLIGLKLVNMNFYPTCPNPELTVGVGRHSDMGILTVLL 240

Query: 241 QDGIGGLYVKVEEDIPDVGKKGEWMEIPPVPGALVINVGDTLQILSNGRYKSAEHRVRTT 300
           QD IGGLYVK+EE++ D  +KG+W+EIPPVPGALVINVGDTLQILSNGRYKSAEHRVRTT
Sbjct: 241 QDDIGGLYVKMEEEM-DGKRKGDWLEIPPVPGALVINVGDTLQILSNGRYKSAEHRVRTT 299

Query: 301 SSKSRVSIPIFTMPKPTVKIGPLPQLVEKEG-SRFREFLFQDYRNNFFSNAHDGKKSLDF 359
            +KSRVSIPIFT+PKPT +IGPLPQ+VE++G +R+REF+F++Y NNFFSNAHDGKKSLDF
Sbjct: 300 RTKSRVSIPIFTIPKPTERIGPLPQVVERDGVARYREFIFEEYMNNFFSNAHDGKKSLDF 359

Query: 360 ARAI 363
           A+ I
Sbjct: 360 AKNI 363

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|255544670|ref|XP_002513396.1| leucoanthocyanidin dioxygenase, putative [Ricinus communis] gi|223547304|gb|EEF48799.1| leucoanthocyanidin dioxygenase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|147861098|emb|CAN80862.1| hypothetical protein VITISV_011327 [Vitis vinifera] Back     alignment and taxonomy information
>gi|296083508|emb|CBI23485.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|359497230|ref|XP_002263144.2| PREDICTED: LOW QUALITY PROTEIN: 1-aminocyclopropane-1-carboxylate oxidase homolog 12 [Vitis vinifera] Back     alignment and taxonomy information
>gi|296083512|emb|CBI23495.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|296082730|emb|CBI21735.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|359494539|ref|XP_002263261.2| PREDICTED: 1-aminocyclopropane-1-carboxylate oxidase homolog 5 [Vitis vinifera] Back     alignment and taxonomy information
>gi|363807822|ref|NP_001242438.1| uncharacterized protein LOC100803722 [Glycine max] gi|255645215|gb|ACU23105.1| unknown [Glycine max] Back     alignment and taxonomy information
>gi|388503850|gb|AFK39991.1| unknown [Lotus japonicus] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query363
TAIR|locus:2090359357 AT3G12900 [Arabidopsis thalian 0.975 0.991 0.645 5.9e-128
TAIR|locus:2086789361 AT3G13610 [Arabidopsis thalian 0.939 0.944 0.478 1.9e-83
TAIR|locus:2035671361 AT1G55290 [Arabidopsis thalian 0.942 0.947 0.464 5.8e-82
TAIR|locus:505006595360 AT5G12270 [Arabidopsis thalian 0.925 0.933 0.387 5.4e-63
TAIR|locus:2148403364 AT5G59530 [Arabidopsis thalian 0.898 0.895 0.310 2.7e-45
TAIR|locus:2089428364 LBO1 "LATERAL BRANCHING OXIDOR 0.889 0.887 0.327 3.1e-44
TAIR|locus:2127686348 AT4G10490 [Arabidopsis thalian 0.876 0.913 0.320 3.1e-44
TAIR|locus:2127691349 AT4G10500 [Arabidopsis thalian 0.876 0.911 0.309 1.7e-43
TAIR|locus:2040575366 AT2G36690 [Arabidopsis thalian 0.900 0.893 0.327 5.7e-43
TAIR|locus:2148303366 AT5G59540 [Arabidopsis thalian 0.909 0.901 0.305 5.7e-43
TAIR|locus:2090359 AT3G12900 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1256 (447.2 bits), Expect = 5.9e-128, P = 5.9e-128
 Identities = 235/364 (64%), Positives = 290/364 (79%)

Query:     1 MAPSLEDGDSLFNFVVQDGNGVKGMVDLGLSKVPQPYIQPQEERIDKKNASIC-AQAPID 59
             M  + ED  +LFNFVV++GNGVKGM+D GLS VP+P++QP  ERI  + A  C A  PID
Sbjct:     1 MGINFEDQTTLFNFVVREGNGVKGMIDSGLSSVPRPFVQPLSERIPTQKALTCEATQPID 60

Query:    60 LSKLDGPNHEEVARQIARASETLGFFQVVNHGVPVELLESLKDAAHAFFNQTPGKKAVYR 119
             LS LDGP H+EVA+QI  A+ETLGFFQVVNHGV VELLE LK +AH FF Q P +K++Y 
Sbjct:    61 LSNLDGPQHKEVAKQIVEAAETLGFFQVVNHGVSVELLELLKSSAHEFFAQAPEEKSMYL 120

Query:   120 KGVSPSPLVKYGTSFVPEKEKALEWKDYISMVYTNDAEALQQWPKECNIVALEYLRTSMK 179
             K VSPS LVKYGTSFVP+KEKA+EWKDY+SM+YTND+EALQ WP+ C  VALE+L +SM+
Sbjct:   121 KEVSPSKLVKYGTSFVPDKEKAIEWKDYVSMLYTNDSEALQHWPQPCREVALEFLNSSME 180

Query:   180 MVRKLLEVLFKNLGVTLDEPELDAIIGFKMVNMNFYPTCPNPELTVGVGRHSDMGALTIL 239
             MV+ ++ +L +N+GVTL+E +++ ++G KMVNMN+YPTCP+PELTVGVGRHSDMG LT+L
Sbjct:   181 MVKNVVNILMENVGVTLEEEKMNGLMGTKMVNMNYYPTCPSPELTVGVGRHSDMGMLTVL 240

Query:   240 LQDGIGGLYVKVEEDIPDVGKKGEWMEIPPVPGALVINVGDTLQILSNGRYKSAEHXXXX 299
             LQDGIGGLYVK++         GEW EIPPV GALVIN+GDTLQILSNG+YKSAEH    
Sbjct:   241 LQDGIGGLYVKLDN--------GEWAEIPPVHGALVINIGDTLQILSNGKYKSAEHRVRT 292

Query:   300 XXXXXXXXIPIFTMPKPTVKIGPLPQLVEKEG-SRFREFLFQDYRNNFFSNAHDGKKSLD 358
                     +PIFT P P+ K+GPLP++V+++G +R++EFLFQDY NNFF   HDGKKSLD
Sbjct:   293 TNIGSRVSVPIFTAPNPSQKVGPLPEVVKRDGVARYKEFLFQDYMNNFFGQPHDGKKSLD 352

Query:   359 FARA 362
             FARA
Sbjct:   353 FARA 356
GO:0005737 "cytoplasm" evidence=ISM
GO:0016491 "oxidoreductase activity" evidence=IEA
GO:0016706 "oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors" evidence=IEA;ISS
GO:0055114 "oxidation-reduction process" evidence=IEA
GO:0071281 "cellular response to iron ion" evidence=IEP
GO:0071369 "cellular response to ethylene stimulus" evidence=IEP
GO:0071732 "cellular response to nitric oxide" evidence=IEP
TAIR|locus:2086789 AT3G13610 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2035671 AT1G55290 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:505006595 AT5G12270 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2148403 AT5G59530 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2089428 LBO1 "LATERAL BRANCHING OXIDOREDUCTASE 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2127686 AT4G10490 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2127691 AT4G10500 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2040575 AT2G36690 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2148303 AT5G59540 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer1.14.110.766
4th Layer1.14.11.9LOW CONFIDENCE prediction!
4th Layer1.14.11.4LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
eugene3.00050361
hypothetical protein (366 aa)
(Populus trichocarpa)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query363
PLN02947374 PLN02947, PLN02947, oxidoreductase 5e-73
PLN02393362 PLN02393, PLN02393, leucoanthocyanidin dioxygenase 2e-67
PLN02758361 PLN02758, PLN02758, oxidoreductase, 2OG-Fe(II) oxy 5e-65
PLN02639337 PLN02639, PLN02639, oxidoreductase, 2OG-Fe(II) oxy 1e-61
PLN02912348 PLN02912, PLN02912, oxidoreductase, 2OG-Fe(II) oxy 7e-60
PLN03178360 PLN03178, PLN03178, leucoanthocyanidin dioxygenase 3e-59
PLN02704335 PLN02704, PLN02704, flavonol synthase 8e-57
PLN02750345 PLN02750, PLN02750, oxidoreductase, 2OG-Fe(II) oxy 6e-54
PLN02276361 PLN02276, PLN02276, gibberellin 20-oxidase 4e-53
COG3491322 COG3491, PcbC, Isopenicillin N synthase and relate 2e-50
PLN02254358 PLN02254, PLN02254, gibberellin 3-beta-dioxygenase 4e-49
PLN02216357 PLN02216, PLN02216, protein SRG1 1e-46
PLN02904357 PLN02904, PLN02904, oxidoreductase 2e-42
PLN02515358 PLN02515, PLN02515, naringenin,2-oxoglutarate 3-di 4e-41
PLN03001262 PLN03001, PLN03001, oxidoreductase, 2OG-Fe(II) oxy 3e-39
PLN02403303 PLN02403, PLN02403, aminocyclopropanecarboxylate o 1e-37
PLN02299321 PLN02299, PLN02299, 1-aminocyclopropane-1-carboxyl 7e-36
PLN02997325 PLN02997, PLN02997, flavonol synthase 7e-36
PLN00417348 PLN00417, PLN00417, oxidoreductase, 2OG-Fe(II) oxy 2e-32
PTZ00273320 PTZ00273, PTZ00273, oxidase reductase; Provisional 7e-31
pfam0317196 pfam03171, 2OG-FeII_Oxy, 2OG-Fe(II) oxygenase supe 9e-31
PLN02156335 PLN02156, PLN02156, gibberellin 2-beta-dioxygenase 2e-30
PLN02485329 PLN02485, PLN02485, oxidoreductase 2e-29
PLN02984341 PLN02984, PLN02984, oxidoreductase, 2OG-Fe(II) oxy 1e-24
pfam14226113 pfam14226, DIOX_N, non-haem dioxygenase in morphin 1e-23
PLN02365300 PLN02365, PLN02365, 2-oxoglutarate-dependent dioxy 2e-23
PLN03002332 PLN03002, PLN03002, oxidoreductase, 2OG-Fe(II) oxy 4e-17
PLN03176120 PLN03176, PLN03176, flavanone-3-hydroxylase; Provi 6e-04
>gnl|CDD|215510 PLN02947, PLN02947, oxidoreductase Back     alignment and domain information 
 Score =  231 bits (590), Expect = 5e-73
 Identities = 122/328 (37%), Positives = 179/328 (54%), Gaps = 26/328 (7%)

Query: 20  NGVKGMVDLGLSKVPQPYIQPQEER-----IDKKNASICAQAP-IDLSKLDGPNHEEVAR 73
            GVK + D G++KVP  YI P  +R      +   AS   + P IDL++L G N   V  
Sbjct: 26  KGVKHLCDSGITKVPAKYILPASDRPGLTRDEAIAASGNLKLPVIDLAELRGSNRPHVLA 85

Query: 74  QIARASETLGFFQVVNHGVPVELLESLKDAAHAFFNQTPGKKAVYRKGVSPSPLVKYGTS 133
            +A A    GFFQVVNHGVP E++  + D A  FF     ++A Y      +P V+YGTS
Sbjct: 86  TLAAACREYGFFQVVNHGVPSEVIGGMIDVARRFFELPLEERAKYMSADMRAP-VRYGTS 144

Query: 134 FVPEKEKALEWKDYISMVYTNDAEALQQWPK---ECNIVALEYLRTSMKMVRKLLEVLFK 190
           F   K+    W+D++ +V    ++ L  WP    +   VA  Y + + ++  +L+E + +
Sbjct: 145 FNQNKDAVFCWRDFLKLVCHPLSDVLPHWPSSPADLRKVAATYAKATKRLFLELMEAILE 204

Query: 191 NLGVTLDE-----PELDAIIGFKMVNMNFYPTCPNPELTVGVGRHSDMGALTILLQDGIG 245
           +LG+          E +A  G +M+ +N YP CP PELT+G+  HSD G LT+LLQD + 
Sbjct: 205 SLGIVKRGSDELLEEFEA--GSQMMVVNCYPACPEPELTLGMPPHSDYGFLTLLLQDEVE 262

Query: 246 GLYVKVEEDIPDVGKKGEWMEIPPVPGALVINVGDTLQILSNGRYKSAEHRVRTTSSKSR 305
           GL +            G W+ + P+PG+ V+NVGD L+I SNGRYKS  HRVR  S+K R
Sbjct: 263 GLQIM---------HAGRWVTVEPIPGSFVVNVGDHLEIFSNGRYKSVLHRVRVNSTKPR 313

Query: 306 VSIPIFTMPKPTVKIGPLPQLVEKEGSR 333
           +S+           +GP P+LV+++  R
Sbjct: 314 ISVASLHSLPFERVVGPAPELVDEQNPR 341

Length = 374
>gnl|CDD|215220 PLN02393, PLN02393, leucoanthocyanidin dioxygenase like protein Back     alignment and domain information
>gnl|CDD|215404 PLN02758, PLN02758, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|178245 PLN02639, PLN02639, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|178500 PLN02912, PLN02912, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|215614 PLN03178, PLN03178, leucoanthocyanidin dioxygenase; Provisional Back     alignment and domain information
>gnl|CDD|166345 PLN02704, PLN02704, flavonol synthase Back     alignment and domain information
>gnl|CDD|178351 PLN02750, PLN02750, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|215156 PLN02276, PLN02276, gibberellin 20-oxidase Back     alignment and domain information
>gnl|CDD|226022 COG3491, PcbC, Isopenicillin N synthase and related dioxygenases [General function prediction only] Back     alignment and domain information
>gnl|CDD|215142 PLN02254, PLN02254, gibberellin 3-beta-dioxygenase Back     alignment and domain information
>gnl|CDD|215129 PLN02216, PLN02216, protein SRG1 Back     alignment and domain information
>gnl|CDD|178492 PLN02904, PLN02904, oxidoreductase Back     alignment and domain information
>gnl|CDD|178130 PLN02515, PLN02515, naringenin,2-oxoglutarate 3-dioxygenase Back     alignment and domain information
>gnl|CDD|166642 PLN03001, PLN03001, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|178025 PLN02403, PLN02403, aminocyclopropanecarboxylate oxidase Back     alignment and domain information
>gnl|CDD|215168 PLN02299, PLN02299, 1-aminocyclopropane-1-carboxylate oxidase Back     alignment and domain information
>gnl|CDD|178576 PLN02997, PLN02997, flavonol synthase Back     alignment and domain information
>gnl|CDD|177810 PLN00417, PLN00417, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|140299 PTZ00273, PTZ00273, oxidase reductase; Provisional Back     alignment and domain information
>gnl|CDD|217403 pfam03171, 2OG-FeII_Oxy, 2OG-Fe(II) oxygenase superfamily Back     alignment and domain information
>gnl|CDD|177816 PLN02156, PLN02156, gibberellin 2-beta-dioxygenase Back     alignment and domain information
>gnl|CDD|215267 PLN02485, PLN02485, oxidoreductase Back     alignment and domain information
>gnl|CDD|215534 PLN02984, PLN02984, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|222608 pfam14226, DIOX_N, non-haem dioxygenase in morphine synthesis N-terminal Back     alignment and domain information
>gnl|CDD|177993 PLN02365, PLN02365, 2-oxoglutarate-dependent dioxygenase Back     alignment and domain information
>gnl|CDD|178579 PLN03002, PLN03002, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|178720 PLN03176, PLN03176, flavanone-3-hydroxylase; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 363
PLN02947374 oxidoreductase 100.0
PLN02904357 oxidoreductase 100.0
PLN02216357 protein SRG1 100.0
PLN02758361 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02912348 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02254358 gibberellin 3-beta-dioxygenase 100.0
PLN02639337 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02393362 leucoanthocyanidin dioxygenase like protein 100.0
PLN03178360 leucoanthocyanidin dioxygenase; Provisional 100.0
PLN02704335 flavonol synthase 100.0
PLN02276361 gibberellin 20-oxidase 100.0
PLN02515358 naringenin,2-oxoglutarate 3-dioxygenase 100.0
KOG0143322 consensus Iron/ascorbate family oxidoreductases [S 100.0
PLN00417348 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02750345 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02997325 flavonol synthase 100.0
PLN02299321 1-aminocyclopropane-1-carboxylate oxidase 100.0
PLN03002332 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02156335 gibberellin 2-beta-dioxygenase 100.0
PTZ00273320 oxidase reductase; Provisional 100.0
PLN02365300 2-oxoglutarate-dependent dioxygenase 100.0
PLN02485329 oxidoreductase 100.0
PLN02403303 aminocyclopropanecarboxylate oxidase 100.0
PLN02984341 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
COG3491322 PcbC Isopenicillin N synthase and related dioxygen 100.0
PLN03001262 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PF0317198 2OG-FeII_Oxy: 2OG-Fe(II) oxygenase superfamily Ent 99.91
PF14226116 DIOX_N: non-haem dioxygenase in morphine synthesis 99.88
PLN03176120 flavanone-3-hydroxylase; Provisional 99.86
PF13640100 2OG-FeII_Oxy_3: 2OG-Fe(II) oxygenase superfamily; 96.12
smart00702178 P4Hc Prolyl 4-hydroxylase alpha subunit homologues 93.94
PRK05467226 Fe(II)-dependent oxygenase superfamily protein; Pr 91.86
TIGR02466201 conserved hypothetical protein. This family consis 86.52
PF12851171 Tet_JBP: Oxygenase domain of the 2OGFeDO superfami 84.43
PF13759101 2OG-FeII_Oxy_5: Putative 2OG-Fe(II) oxygenase; PDB 82.96
>PLN02947 oxidoreductase Back     alignment and domain information 
Probab=100.00  E-value=3e-83  Score=622.80  Aligned_cols=333  Identities=35%  Similarity=0.620  Sum_probs=289.5

Q ss_pred             CchHHHhhcCCCCCCCCccCCCCCcccccc-c--ccCCCCCceeeeCCC---CChHHHHHHHHHHHHHcCeEEEEcCCCC
Q 017959           20 NGVKGMVDLGLSKVPQPYIQPQEERIDKKN-A--SICAQAPIDLSKLDG---PNHEEVARQIARASETLGFFQVVNHGVP   93 (363)
Q Consensus        20 ~~v~~l~~~~~~~~p~~~~~p~~~~~~~~~-~--~~~~~~~iPvIDls~---~~~~~~~~~l~~A~~~~GFF~l~nhGi~   93 (363)
                      ++||.|+++|+++||++|++|++++|.... .  ......+||||||+.   ..+.+++++|++||++||||||+|||||
T Consensus        26 ~~v~~l~~~~~~~vp~~yv~p~~~~~~~~~~~~~~~~~~~~iPvIDls~l~~~~~~~~~~~l~~Ac~~~GFF~v~nHGIp  105 (374)
T PLN02947         26 KGVKHLCDSGITKVPAKYILPASDRPGLTRDEAIAASGNLKLPVIDLAELRGSNRPHVLATLAAACREYGFFQVVNHGVP  105 (374)
T ss_pred             cCHHHHHhcCCCcCCHHhcCCchhccccccccccccCCCCCCCeEECcccCCccHHHHHHHHHHHHHHCcEEEEEcCCCC
Confidence            589999999999999999999998874321 0  000233799999986   3467899999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhcCCHHHHhccccCCCCCCceeecccccccccccCCcccceeeeeccchhhhccCC---cchHHHH
Q 017959           94 VELLESLKDAAHAFFNQTPGKKAVYRKGVSPSPLVKYGTSFVPEKEKALEWKDYISMVYTNDAEALQQWP---KECNIVA  170 (363)
Q Consensus        94 ~~~~~~~~~~~~~FF~lP~eeK~~~~~~~~~~~~~gy~~~~~~~~~~~~d~~e~~~~~~~p~~~~~~~wP---~~fr~~~  170 (363)
                      .++++++++.+++||+||.|+|+++..... ....||+..+....+...+|+|.+.+...|.....+.||   +.||+.+
T Consensus       106 ~~li~~~~~~~~~FF~LP~eeK~k~~~~~~-~~~~gyg~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~WP~~~~~fr~~~  184 (374)
T PLN02947        106 SEVIGGMIDVARRFFELPLEERAKYMSADM-RAPVRYGTSFNQNKDAVFCWRDFLKLVCHPLSDVLPHWPSSPADLRKVA  184 (374)
T ss_pred             HHHHHHHHHHHHHHhcCCHHHHhhhhcccC-CCCeeeccccccccccccCceeceeeecCCcccccccCccchHHHHHHH
Confidence            999999999999999999999999854432 234577655443345567999998776556433467897   5799999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhcCCCCC---Ccc-ccccccceeeecccCCCCCCCCCcCCccccccCCceEEEeeCCcCc
Q 017959          171 LEYLRTSMKMVRKLLEVLFKNLGVTLD---EPE-LDAIIGFKMVNMNFYPTCPNPELTVGVGRHSDMGALTILLQDGIGG  246 (363)
Q Consensus       171 ~~y~~~~~~l~~~ll~~l~~~Lgl~~~---~~~-~~~~~~~~l~~~~~YPp~~~~~~~~g~~~HtD~~~lTlL~qd~v~G  246 (363)
                      ++|+++|.+|+.+||++|+++|||+++   +|. ........+| +||||||++++.++|+++|||+|+||||+||+++|
T Consensus       185 ~~Y~~~~~~L~~~ll~~la~~Lgl~~~~~~~~~~~~~~~~~~lr-ln~YPp~p~~~~~~G~~~HTD~g~lTlL~Qd~v~G  263 (374)
T PLN02947        185 ATYAKATKRLFLELMEAILESLGIVKRGSDELLEEFEAGSQMMV-VNCYPACPEPELTLGMPPHSDYGFLTLLLQDEVEG  263 (374)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHcCCCccchHHHHHHhcCcceeee-eecCCCCCCcccccCCCCccCCCceEEEEecCCCC
Confidence            999999999999999999999999754   443 2223345677 99999999999999999999999999999999999


Q ss_pred             eEEEeCCCCCCCCCCCcEEEcCCCCCeEEEEccchhHHhhcCccccccccccCCCCCCeeEEEEeecCCCCCeEecCCcc
Q 017959          247 LYVKVEEDIPDVGKKGEWMEIPPVPGALVINVGDTLQILSNGRYKSAEHRVRTTSSKSRVSIPIFTMPKPTVKIGPLPQL  326 (363)
Q Consensus       247 LqV~~~~~~~~~~~~g~W~~V~p~pgalvVniGD~le~lSnG~~kS~~HRVv~~~~~~R~Sia~F~~P~~d~~i~Pl~~~  326 (363)
                      |||++++         +|++|+|+||++||||||+||+||||+|||++|||++++.++|||||||++|+.|++|.|+++|
T Consensus       264 LQV~~~g---------~Wi~V~p~pga~VVNvGD~Lq~~SNG~~kS~~HRVv~~~~~~R~Sia~F~~P~~d~~i~Pl~~l  334 (374)
T PLN02947        264 LQIMHAG---------RWVTVEPIPGSFVVNVGDHLEIFSNGRYKSVLHRVRVNSTKPRISVASLHSLPFERVVGPAPEL  334 (374)
T ss_pred             eeEeECC---------EEEeCCCCCCeEEEEeCceeeeeeCCEEeccccccccCCCCCEEEEEEEecCCCCCEEeCChHh
Confidence            9999865         9999999999999999999999999999999999999888899999999999999999999999


Q ss_pred             cccCC-CccCcccHHHHHHHHHhccCCCCccccccccC
Q 017959          327 VEKEG-SRFREFLFQDYRNNFFSNAHDGKKSLDFARAI  363 (363)
Q Consensus       327 v~~~~-~~y~~~~~~ey~~~~~~~~~~g~~~~~~~~~~  363 (363)
                      +++++ ++|++++|+||++.++++...|++.++.+|+|
T Consensus       335 v~~~~p~~Y~~~~~~ey~~~~~~~~~~~~~~l~~~~~~  372 (374)
T PLN02947        335 VDEQNPRRYMDTDFATFLAYLASAEGKHKNFLESRKLI  372 (374)
T ss_pred             cCCCCCCcCCCCCHHHHHHHHHHhccCchhhhhhhhcc
Confidence            99888 99999999999999999999999999999987

>PLN02904 oxidoreductase Back     alignment and domain information
>PLN02216 protein SRG1 Back     alignment and domain information
>PLN02758 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02912 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02254 gibberellin 3-beta-dioxygenase Back     alignment and domain information
>PLN02639 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02393 leucoanthocyanidin dioxygenase like protein Back     alignment and domain information
>PLN03178 leucoanthocyanidin dioxygenase; Provisional Back     alignment and domain information
>PLN02704 flavonol synthase Back     alignment and domain information
>PLN02276 gibberellin 20-oxidase Back     alignment and domain information
>PLN02515 naringenin,2-oxoglutarate 3-dioxygenase Back     alignment and domain information
>KOG0143 consensus Iron/ascorbate family oxidoreductases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only] Back     alignment and domain information
>PLN00417 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02750 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02997 flavonol synthase Back     alignment and domain information
>PLN02299 1-aminocyclopropane-1-carboxylate oxidase Back     alignment and domain information
>PLN03002 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02156 gibberellin 2-beta-dioxygenase Back     alignment and domain information
>PTZ00273 oxidase reductase; Provisional Back     alignment and domain information
>PLN02365 2-oxoglutarate-dependent dioxygenase Back     alignment and domain information
>PLN02485 oxidoreductase Back     alignment and domain information
>PLN02403 aminocyclopropanecarboxylate oxidase Back     alignment and domain information
>PLN02984 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>COG3491 PcbC Isopenicillin N synthase and related dioxygenases [General function prediction only] Back     alignment and domain information
>PLN03001 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PF03171 2OG-FeII_Oxy: 2OG-Fe(II) oxygenase superfamily Entry for Lysyl hydrolases This Prosite entry is a sub-family of the Pfam entry; InterPro: IPR005123 This domain is found in members of the 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily [], as well as the C-terminal of prolyl 4-hydroxylase alpha subunit Back     alignment and domain information
>PF14226 DIOX_N: non-haem dioxygenase in morphine synthesis N-terminal; PDB: 3OOX_A 1BK0_A 1IPS_B 1QIQ_A 1OC1_A 2Y86_A 2Y60_A 1W03_A 2VE1_A 1QJF_A Back     alignment and domain information
>PLN03176 flavanone-3-hydroxylase; Provisional Back     alignment and domain information
>PF13640 2OG-FeII_Oxy_3: 2OG-Fe(II) oxygenase superfamily; PDB: 3DKQ_B 3GZE_D 3HQR_A 2Y34_A 2G1M_A 2G19_A 3OUI_A 3OUJ_A 2HBU_A 2Y33_A Back     alignment and domain information
>smart00702 P4Hc Prolyl 4-hydroxylase alpha subunit homologues Back     alignment and domain information
>PRK05467 Fe(II)-dependent oxygenase superfamily protein; Provisional Back     alignment and domain information
>TIGR02466 conserved hypothetical protein Back     alignment and domain information
>PF12851 Tet_JBP: Oxygenase domain of the 2OGFeDO superfamily ; InterPro: IPR024779 TETs are 2OG- and Fe(II)-dependent oxygenases that catalyse the conversion of 5 methyl-Cytosine (5-MC) to 5-hydroxymethyl-cytosine (hmC) in cultured cells and in vitro [] Back     alignment and domain information
>PF13759 2OG-FeII_Oxy_5: Putative 2OG-Fe(II) oxygenase; PDB: 3BVC_B 2RG4_A Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query363
1gp5_A356 Anthocyanidin Synthase From Arabidopsis Thaliana Co 7e-35
2brt_A355 Anthocyanidin Synthase From Arabidopsis Thaliana Co 8e-35
1gp4_A356 Anthocyanidin Synthase From Arabidopsis Thaliana (S 1e-33
1w9y_A319 The Structure Of Acc Oxidase Length = 319 7e-26
3oox_A312 Crystal Structure Of A Putative 2og-Fe(Ii) Oxygenas 2e-09
3on7_A280 Crystal Structure Of A Putative Oxygenase (So_2589) 6e-07
2bjs_A325 Isopenicillin N Synthase C-Terminal Truncation Muta 4e-05
1ips_A331 Isopenicillin N Synthase From Aspergillus Nidulans 4e-05
>pdb|1GP5|A Chain A, Anthocyanidin Synthase From Arabidopsis Thaliana Complexed With Trans-Dihydroquercetin Length = 356 Back     alignment and structure 
Iteration: 1

 Score =  144 bits (363), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 98/329 (29%), Positives = 160/329 (48%), Gaps = 29/329 (8%)
Query: 22  VKGMVDLGLSKVPQPYIQPQEER-------IDKKNASICAQAPIDLSKLDGPN---HEEV 71
           V+ +   G+  +P+ YI+P+EE        +++K         IDL  ++  +    E  
Sbjct: 7   VESLAKSGIISIPKEYIRPKEELESINDVFLEEKKEDGPQVPTIDLKNIESDDEKIRENC 66
Query: 72  ARQIARASETLGFFQVVNHGVPVELLESLKDAAHAFFNQTPGKKAVYRKGVSPSPLVKYG 131
             ++ +AS   G   ++NHG+P +L+E +K A   FF+ +  +K  Y    +   +  YG
Sbjct: 67  IEELKKASLDWGVMHLINHGIPADLMERVKKAGEEFFSLSVEEKEKYANDQATGKIQGYG 126
Query: 132 TSFVPEKEKALEWKDY-ISMVYTNDAEALQQWPKECNIVALEYLRTSMKMVRKLLEVLFK 190
           +         LEW+DY   + Y  +   L  WPK  +   +E      K +R L   +FK
Sbjct: 127 SKLANNASGQLEWEDYFFHLAYPEEKRDLSIWPKTPSDY-IEATSEYAKCLRLLATKVFK 185
Query: 191 NLGVTLD-EPE-LDAIIG-----FKMVNMNFYPTCPNPELTVGVGRHSDMGALTILLQDG 243
            L V L  EP+ L+  +G        + +N+YP CP PEL +GV  H+D+ ALT +L + 
Sbjct: 186 ALSVGLGLEPDRLEKEVGGLEELLLQMKINYYPKCPQPELALGVEAHTDVSALTFILHNM 245
Query: 244 IGGLYVKVEEDIPDVGKKGEWMEIPPVPGALVINVGDTLQILSNGRYKSAEHXXXXXXXX 303
           + GL +  E         G+W+    VP ++V+++GDTL+ILSNG+YKS  H        
Sbjct: 246 VPGLQLFYE---------GKWVTAKCVPDSIVMHIGDTLEILSNGKYKSILHRGLVNKEK 296
Query: 304 XXXXIPIFTM-PKPTVKIGPLPQLVEKEG 331
                 +F   PK  + + PLP++V  E 
Sbjct: 297 VRISWAVFCEPPKDKIVLKPLPEMVSVES 325
>pdb|2BRT|A Chain A, Anthocyanidin Synthase From Arabidopsis Thaliana Complexed With Naringenin Length = 355 Back     alignment and structure
>pdb|1GP4|A Chain A, Anthocyanidin Synthase From Arabidopsis Thaliana (Selenomethionine Substituted) Length = 356 Back     alignment and structure
>pdb|1W9Y|A Chain A, The Structure Of Acc Oxidase Length = 319 Back     alignment and structure
>pdb|3OOX|A Chain A, Crystal Structure Of A Putative 2og-Fe(Ii) Oxygenase Family Protein (Cc_0200) From Caulobacter Crescentus At 1.44 A Resolution Length = 312 Back     alignment and structure
>pdb|3ON7|A Chain A, Crystal Structure Of A Putative Oxygenase (So_2589) From Shewanella Oneidensis At 2.20 A Resolution Length = 280 Back     alignment and structure
>pdb|2BJS|A Chain A, Isopenicillin N Synthase C-Terminal Truncation Mutant Length = 325 Back     alignment and structure
>pdb|1IPS|A Chain A, Isopenicillin N Synthase From Aspergillus Nidulans (Manganese Complex) Length = 331 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query363
1gp6_A356 Leucoanthocyanidin dioxygenase; 2-oxoglutarate dep 1e-126
1w9y_A319 1-aminocyclopropane-1-carboxylate oxidase 1; oxyge 1e-109
1odm_A331 Isopenicillin N synthase; antibiotic biosynthesis, 4e-74
1dcs_A311 Deacetoxycephalosporin C synthase; ferrous oxygena 2e-70
3on7_A280 Oxidoreductase, iron/ascorbate family; structural 9e-67
3oox_A312 Putative 2OG-Fe(II) oxygenase family protein; stru 1e-62
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-05
>1gp6_A Leucoanthocyanidin dioxygenase; 2-oxoglutarate dependent dioxygenase, flavonoid biosynthesis; HET: MES QUE DH2; 1.75A {Arabidopsis thaliana} SCOP: b.82.2.1 PDB: 1gp5_A* 1gp4_A* 2brt_A* Length = 356 Back     alignment and structure
 Score =  366 bits (943), Expect = e-126
 Identities = 99/361 (27%), Positives = 169/361 (46%), Gaps = 36/361 (9%)

Query: 22  VKGMVDLGLSKVPQPYIQPQEERIDKKNASICAQAP-------IDLSKLDGPN---HEEV 71
           V+ +   G+  +P+ YI+P+EE     +  +  +         IDL  ++  +    E  
Sbjct: 7   VESLAKSGIISIPKEYIRPKEELESINDVFLEEKKEDGPQVPTIDLKNIESDDEKIRENC 66

Query: 72  ARQIARASETLGFFQVVNHGVPVELLESLKDAAHAFFNQTPGKKAVYRKGVSPSPLVKYG 131
             ++ +AS   G   ++NHG+P +L+E +K A   FF+ +  +K  Y    +   +  YG
Sbjct: 67  IEELKKASLDWGVMHLINHGIPADLMERVKKAGEEFFSLSVEEKEKYANDQATGKIQGYG 126

Query: 132 TSFVPEKEKALEWKDYISM-VYTNDAEALQQWPKECNI---VALEYLRTSMKMVRKLLEV 187
           +         LEW+DY     Y  +   L  WPK  +       EY +    +  K+ + 
Sbjct: 127 SKLANNASGQLEWEDYFFHLAYPEEKRDLSIWPKTPSDYIEATSEYAKCLRLLATKVFKA 186

Query: 188 LFKNLGVTLDEPELDAIIG-----FKMVNMNFYPTCPNPELTVGVGRHSDMGALTILLQD 242
           L   LG  L+   L+  +G        + +N+YP CP PEL +GV  H+D+ ALT +L +
Sbjct: 187 LSVGLG--LEPDRLEKEVGGLEELLLQMKINYYPKCPQPELALGVEAHTDVSALTFILHN 244

Query: 243 GIGGLYVKVEEDIPDVGKKGEWMEIPPVPGALVINVGDTLQILSNGRYKSAEHRVRTTSS 302
            + GL +           +G+W+    VP ++V+++GDTL+ILSNG+YKS  HR      
Sbjct: 245 MVPGLQLF---------YEGKWVTAKCVPDSIVMHIGDTLEILSNGKYKSILHRGLVNKE 295

Query: 303 KSRVSIPIFTMPKP-TVKIGPLPQLVEKEG-SRFREFLFQDYRNNFFSNAHDGKKSLDFA 360
           K R+S  +F  P    + + PLP++V  E  ++F    F  +  +       GK+  +  
Sbjct: 296 KVRISWAVFCEPPKDKIVLKPLPEMVSVESPAKFPPRTFAQHIEHKL----FGKEQEELV 351

Query: 361 R 361
            
Sbjct: 352 S 352
>1w9y_A 1-aminocyclopropane-1-carboxylate oxidase 1; oxygenase, 2OG oxygenase, ACCO, ACC oxidase; 2.1A {Petunia hybrida} SCOP: b.82.2.1 PDB: 1wa6_X Length = 319 Back     alignment and structure
>1odm_A Isopenicillin N synthase; antibiotic biosynthesis, B-lactam antibiotic, oxygenase, penicillin biosynthesis, oxidoreductase, iron; HET: ASV; 1.15A {Emericella nidulans} SCOP: b.82.2.1 PDB: 1blz_A* 1hb1_A* 1hb2_A* 1hb3_A* 1hb4_A* 1ips_A 1obn_A* 1oc1_A* 1bk0_A* 1odn_A* 1qiq_A* 1qje_A* 1qjf_A* 1uzw_A* 1w03_A* 1w04_A* 1w05_A* 1w06_A* 1w3v_A* 1w3x_A* ... Length = 331 Back     alignment and structure
>1dcs_A Deacetoxycephalosporin C synthase; ferrous oxygenase, 2-oxoglutarate, oxidoreduc antibiotics, merohedral twinning; 1.30A {Streptomyces clavuligerus} SCOP: b.82.2.1 PDB: 1rxf_A 1rxg_A* 1unb_A* 1uo9_A 1uob_A* 1uof_A* 1uog_A* 2jb8_A 1w28_A 1w2a_X 1w2n_A* 1w2o_A* 1hjg_A 1hjf_A 1e5h_A 1e5i_A* Length = 311 Back     alignment and structure
>3on7_A Oxidoreductase, iron/ascorbate family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.20A {Shewanella oneidensis} Length = 280 Back     alignment and structure
>3oox_A Putative 2OG-Fe(II) oxygenase family protein; structural genomics, joint center for structural genomics; HET: MSE; 1.44A {Caulobacter crescentus CB15} Length = 312 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query363
1gp6_A356 Leucoanthocyanidin dioxygenase; 2-oxoglutarate dep 100.0
1w9y_A319 1-aminocyclopropane-1-carboxylate oxidase 1; oxyge 100.0
3oox_A312 Putative 2OG-Fe(II) oxygenase family protein; stru 100.0
1dcs_A311 Deacetoxycephalosporin C synthase; ferrous oxygena 100.0
1odm_A331 Isopenicillin N synthase; antibiotic biosynthesis, 100.0
3on7_A280 Oxidoreductase, iron/ascorbate family; structural 100.0
2rg4_A216 Uncharacterized protein; rhodobacterales, oceanico 94.2
3dkq_A243 PKHD-type hydroxylase SBAL_3634; putative oxygenas 91.73
2hbt_A247 EGL nine homolog 1; prolyl hydroxylase, hypoxia in 82.53
>1gp6_A Leucoanthocyanidin dioxygenase; 2-oxoglutarate dependent dioxygenase, flavonoid biosynthesis; HET: MES QUE DH2; 1.75A {Arabidopsis thaliana} SCOP: b.82.2.1 PDB: 1gp5_A* 1gp4_A* 2brt_A* Back     alignment and structure
Probab=100.00  E-value=6.6e-81  Score=604.76  Aligned_cols=328  Identities=28%  Similarity=0.518  Sum_probs=283.1

Q ss_pred             CCchHHHhhcCCCCCCCCccCCCCCccccccc--cc--CCCCCceeeeCCC--C----ChHHHHHHHHHHHHHcCeEEEE
Q 017959           19 GNGVKGMVDLGLSKVPQPYIQPQEERIDKKNA--SI--CAQAPIDLSKLDG--P----NHEEVARQIARASETLGFFQVV   88 (363)
Q Consensus        19 ~~~v~~l~~~~~~~~p~~~~~p~~~~~~~~~~--~~--~~~~~iPvIDls~--~----~~~~~~~~l~~A~~~~GFF~l~   88 (363)
                      .++||+|+++|+.+||++|++|+++++.....  ..  ....+||||||+.  .    .|.+++++|.+||++||||||+
T Consensus         4 ~~~v~~l~~~~~~~vP~~~~~p~~~~~~~~~~~~~~~~~~~~~iPvIDls~l~~~~~~~~~~~~~~l~~A~~~~GFF~v~   83 (356)
T 1gp6_A            4 VERVESLAKSGIISIPKEYIRPKEELESINDVFLEEKKEDGPQVPTIDLKNIESDDEKIRENCIEELKKASLDWGVMHLI   83 (356)
T ss_dssp             CCCHHHHHHTTCSSCCGGGSCCHHHHTTCCCHHHHHHCCCSCCCCEEECTTTTCSCHHHHHHHHHHHHHHHHHTSEEEEE
T ss_pred             cccHHHHHhcCCCCCCHHhcCCchhcccccccccccccccCCCCCEEEchhccCCChHHHHHHHHHHHHHHHhCCEEEEe
Confidence            36799999999999999999998877653210  00  0012699999987  1    2566899999999999999999


Q ss_pred             cCCCCHHHHHHHHHHHHHHhcCCHHHHhccccCCCCCCceeecccccccccccCCcccceeeeeccch-hhhccCC---c
Q 017959           89 NHGVPVELLESLKDAAHAFFNQTPGKKAVYRKGVSPSPLVKYGTSFVPEKEKALEWKDYISMVYTNDA-EALQQWP---K  164 (363)
Q Consensus        89 nhGi~~~~~~~~~~~~~~FF~lP~eeK~~~~~~~~~~~~~gy~~~~~~~~~~~~d~~e~~~~~~~p~~-~~~~~wP---~  164 (363)
                      ||||+.++++++++++++||+||.|+|+++..........||+........+..||+|.|.+...|.. ..++.||   +
T Consensus        84 nHGi~~~l~~~~~~~~~~FF~lP~eeK~~~~~~~~~~~~~Gy~~~~~~~~~~~~d~kE~~~~~~~p~~~~~~~~wP~~~~  163 (356)
T 1gp6_A           84 NHGIPADLMERVKKAGEEFFSLSVEEKEKYANDQATGKIQGYGSKLANNASGQLEWEDYFFHLAYPEEKRDLSIWPKTPS  163 (356)
T ss_dssp             SCSCCHHHHHHHHHHHHHHHTSCHHHHGGGBCBGGGTBCSEEECCCCCSTTCCCCSCEEEEEEEESGGGCCGGGSCCSST
T ss_pred             CCCCCHHHHHHHHHHHHHHHCCCHHHHHhhcccccccCccccCcCcccCCCCCCChhheeeeecCCccccccccCCCcch
Confidence            99999999999999999999999999999965432024578876544444567899999988766643 3467898   4


Q ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcc-ccc---cccceeeecccCCCCCCCCCcCCccccccCCceEEEe
Q 017959          165 ECNIVALEYLRTSMKMVRKLLEVLFKNLGVTLDEPE-LDA---IIGFKMVNMNFYPTCPNPELTVGVGRHSDMGALTILL  240 (363)
Q Consensus       165 ~fr~~~~~y~~~~~~l~~~ll~~l~~~Lgl~~~~~~-~~~---~~~~~l~~~~~YPp~~~~~~~~g~~~HtD~~~lTlL~  240 (363)
                      .||+.+++|+++|.+|+.+||++|+++|||++++|. ...   .....+| +||||||++++.++|+++|||+|+||||+
T Consensus       164 ~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~~~~~~~~~lr-l~~YPp~~~~~~~~g~~~HtD~g~lTlL~  242 (356)
T 1gp6_A          164 DYIEATSEYAKCLRLLATKVFKALSVGLGLEPDRLEKEVGGLEELLLQMK-INYYPKCPQPELALGVEAHTDVSALTFIL  242 (356)
T ss_dssp             THHHHHHHHHHHHHHHHHHHHHHHHHHTTSCTTHHHHHTTHHHHCEEEEE-EEEECCCSSTTTCCSEEEECCCSSEEEEE
T ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhcccCCccceee-eeecCCCCCcccccCcCCccCCCeEEEEE
Confidence            799999999999999999999999999999999998 443   2445788 99999999999999999999999999999


Q ss_pred             eCCcCceEEEeCCCCCCCCCCCcEEEcCCCCCeEEEEccchhHHhhcCccccccccccCCCCCCeeEEEEeecCCCCC-e
Q 017959          241 QDGIGGLYVKVEEDIPDVGKKGEWMEIPPVPGALVINVGDTLQILSNGRYKSAEHRVRTTSSKSRVSIPIFTMPKPTV-K  319 (363)
Q Consensus       241 qd~v~GLqV~~~~~~~~~~~~g~W~~V~p~pgalvVniGD~le~lSnG~~kS~~HRVv~~~~~~R~Sia~F~~P~~d~-~  319 (363)
                      ||+++||||++++         +|++|+|+||++||||||+||+||||+|||++|||++++..+|||++||++|+.|+ +
T Consensus       243 qd~v~GLQV~~~g---------~Wi~V~p~pgalvVNiGD~l~~~TnG~~kS~~HRVv~~~~~~R~Sia~F~~P~~d~~~  313 (356)
T 1gp6_A          243 HNMVPGLQLFYEG---------KWVTAKCVPDSIVMHIGDTLEILSNGKYKSILHRGLVNKEKVRISWAVFCEPPKDKIV  313 (356)
T ss_dssp             ECSCCCEEEEETT---------EEEECCCCTTCEEEEECHHHHHHTTTSSCCCCEEECCCSSCCEEEEEEEEECCTTTCE
T ss_pred             EcCCCCeEEecCC---------cEEECcCCCCeEEEEeccHHHHhcCCEeeccCceecCCCCCCEEEEEEeecCCCCCcE
Confidence            9999999999755         99999999999999999999999999999999999999889999999999999999 9


Q ss_pred             EecCCcccccCC-CccCcccHHHHHHHHHhccCCCCcc
Q 017959          320 IGPLPQLVEKEG-SRFREFLFQDYRNNFFSNAHDGKKS  356 (363)
Q Consensus       320 i~Pl~~~v~~~~-~~y~~~~~~ey~~~~~~~~~~g~~~  356 (363)
                      |+|+++++++++ ++|+++|++||+..++.++++||..
T Consensus       314 i~pl~~~~~~~~p~~y~~~t~~eyl~~~~~~~~d~~~~  351 (356)
T 1gp6_A          314 LKPLPEMVSVESPAKFPPRTFAQHIEHKLFGKEQEELV  351 (356)
T ss_dssp             ECCCGGGCCSSSCCSSCCEEHHHHHHHHHHHHHHHHC-
T ss_pred             EeCChhhcCCCCCccCCCccHHHHHHHHHHhccCcchh
Confidence            999999999888 9999999999999998887776643
>1w9y_A 1-aminocyclopropane-1-carboxylate oxidase 1; oxygenase, 2OG oxygenase, ACCO, ACC oxidase; 2.1A {Petunia hybrida} SCOP: b.82.2.1 PDB: 1wa6_X Back     alignment and structure
>3oox_A Putative 2OG-Fe(II) oxygenase family protein; structural genomics, joint center for structural genomics; HET: MSE; 1.44A {Caulobacter crescentus CB15} Back     alignment and structure
>1dcs_A Deacetoxycephalosporin C synthase; ferrous oxygenase, 2-oxoglutarate, oxidoreduc antibiotics, merohedral twinning; 1.30A {Streptomyces clavuligerus} SCOP: b.82.2.1 PDB: 1rxf_A 1rxg_A* 1unb_A* 1uo9_A 1uob_A* 1uof_A* 1uog_A* 2jb8_A 1w28_A 1w2a_X 1w2n_A* 1w2o_A* 1hjg_A 1hjf_A 1e5h_A 1e5i_A* Back     alignment and structure
>1odm_A Isopenicillin N synthase; antibiotic biosynthesis, B-lactam antibiotic, oxygenase, penicillin biosynthesis, oxidoreductase, iron; HET: ASV; 1.15A {Emericella nidulans} SCOP: b.82.2.1 PDB: 1blz_A* 1hb1_A* 1hb2_A* 1hb3_A* 1hb4_A* 1ips_A 1obn_A* 1oc1_A* 1bk0_A* 1odn_A* 1qiq_A* 1qje_A* 1qjf_A* 1uzw_A* 1w03_A* 1w04_A* 1w05_A* 1w06_A* 1w3v_A* 1w3x_A* ... Back     alignment and structure
>3on7_A Oxidoreductase, iron/ascorbate family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.20A {Shewanella oneidensis} Back     alignment and structure
>2rg4_A Uncharacterized protein; rhodobacterales, oceanicola granulosus HTCC2516, Q2CBJ1_9RHO structural genomics, PSI-2; 1.90A {Oceanicola granulosus} PDB: 3bvc_A Back     alignment and structure
>3dkq_A PKHD-type hydroxylase SBAL_3634; putative oxygenase, structural genomics, JOI for structural genomics, JCSG; 2.26A {Shewanella baltica OS155} Back     alignment and structure
>2hbt_A EGL nine homolog 1; prolyl hydroxylase, hypoxia inducible factor, HIF, 2- oxoglutarate, oxygenase, oxidoreductase; HET: UN9; 1.60A {Homo sapiens} PDB: 2hbu_A* 2g1m_A* 3hqu_A* 3hqr_A* 2y33_A* 2y34_A* 2g19_A* 3ouj_A* 3ouh_A* 3oui_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 363
d1gp6a_349 b.82.2.1 (A:) Anthocyanidin synthase {Mouse-ear cr 7e-66
d1w9ya1307 b.82.2.1 (A:2-308) 1-aminocyclopropane-1-carboxyla 1e-58
d1dcsa_311 b.82.2.1 (A:) Deacetoxycephalosporin C synthase {S 1e-47
d1odma_329 b.82.2.1 (A:) Isopenicillin N synthase {Emericella 2e-39
>d1gp6a_ b.82.2.1 (A:) Anthocyanidin synthase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 349 Back     information, alignment and structure

class: All beta proteins
fold: Double-stranded beta-helix
superfamily: Clavaminate synthase-like
family: Penicillin synthase-like
domain: Anthocyanidin synthase
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

 Score =  210 bits (534), Expect = 7e-66
 Identities = 94/351 (26%), Positives = 160/351 (45%), Gaps = 29/351 (8%)

Query: 22  VKGMVDLGLSKVPQPYIQPQEERIDKKNASICAQAP-------IDLSKLDGPNH---EEV 71
           V+ +   G+  +P+ YI+P+EE     +  +  +         IDL  ++  +    E  
Sbjct: 6   VESLAKSGIISIPKEYIRPKEELESINDVFLEEKKEDGPQVPTIDLKNIESDDEKIRENC 65

Query: 72  ARQIARASETLGFFQVVNHGVPVELLESLKDAAHAFFNQTPGKKAVYRKGVSPSPLVKYG 131
             ++ +AS   G   ++NHG+P +L+E +K A   FF+ +  +K  Y    +   +  YG
Sbjct: 66  IEELKKASLDWGVMHLINHGIPADLMERVKKAGEEFFSLSVEEKEKYANDQATGKIQGYG 125

Query: 132 TSFVPEKEKALEWKDYISMVYTNDAEALQQWPKECNIVALEYLRTSMKMVRKLLEVLFKN 191
           +         LEW+DY   +   + +       +     +E      K +R L   +FK 
Sbjct: 126 SKLANNASGQLEWEDYFFHLAYPEEKRDLSIWPKTPSDYIEATSEYAKCLRLLATKVFKA 185

Query: 192 LGVTLDEPELDAIIGFKMVN-------MNFYPTCPNPELTVGVGRHSDMGALTILLQDGI 244
           L V L             +        +N+YP CP PEL +GV  H+D+ ALT +L + +
Sbjct: 186 LSVGLGLEPDRLEKEVGGLEELLLQMKINYYPKCPQPELALGVEAHTDVSALTFILHNMV 245

Query: 245 GGLYVKVEEDIPDVGKKGEWMEIPPVPGALVINVGDTLQILSNGRYKSAEHRVRTTSSKS 304
            GL +  E         G+W+    VP ++V+++GDTL+ILSNG+YKS  HR      K 
Sbjct: 246 PGLQLFYE---------GKWVTAKCVPDSIVMHIGDTLEILSNGKYKSILHRGLVNKEKV 296

Query: 305 RVSIPIFTMPKP-TVKIGPLPQLVEKEG-SRFREFLFQDY-RNNFFSNAHD 352
           R+S  +F  P    + + PLP++V  E  ++F    F  +  +  F    +
Sbjct: 297 RISWAVFCEPPKDKIVLKPLPEMVSVESPAKFPPRTFAQHIEHKLFGKEQE 347
>d1w9ya1 b.82.2.1 (A:2-308) 1-aminocyclopropane-1-carboxylate oxidase 1 {Petunia hybrida [TaxId: 4102]} Length = 307 Back     information, alignment and structure
>d1dcsa_ b.82.2.1 (A:) Deacetoxycephalosporin C synthase {Streptomyces clavuligerus [TaxId: 1901]} Length = 311 Back     information, alignment and structure
>d1odma_ b.82.2.1 (A:) Isopenicillin N synthase {Emericella nidulans [TaxId: 162425]} Length = 329 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query363
d1gp6a_349 Anthocyanidin synthase {Mouse-ear cress (Arabidops 100.0
d1w9ya1307 1-aminocyclopropane-1-carboxylate oxidase 1 {Petun 100.0
d1odma_329 Isopenicillin N synthase {Emericella nidulans [Tax 100.0
d1dcsa_311 Deacetoxycephalosporin C synthase {Streptomyces cl 100.0
d2iuwa1210 AlkB homolog 3 {Human (Homo sapiens) [TaxId: 9606] 88.84
>d1gp6a_ b.82.2.1 (A:) Anthocyanidin synthase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
class: All beta proteins
fold: Double-stranded beta-helix
superfamily: Clavaminate synthase-like
family: Penicillin synthase-like
domain: Anthocyanidin synthase
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=5.2e-77  Score=574.36  Aligned_cols=320  Identities=29%  Similarity=0.531  Sum_probs=272.0

Q ss_pred             CCchHHHhhcCCCCCCCCccCCCCCccccccc----ccCCCCCceeeeCCC------CChHHHHHHHHHHHHHcCeEEEE
Q 017959           19 GNGVKGMVDLGLSKVPQPYIQPQEERIDKKNA----SICAQAPIDLSKLDG------PNHEEVARQIARASETLGFFQVV   88 (363)
Q Consensus        19 ~~~v~~l~~~~~~~~p~~~~~p~~~~~~~~~~----~~~~~~~iPvIDls~------~~~~~~~~~l~~A~~~~GFF~l~   88 (363)
                      ...||+||++|+.+||++|++|+++++.....    ......+||||||+.      ..|++++++|.+||++||||||+
T Consensus         3 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~IPvIDls~l~~~d~~~r~~~~~~l~~A~~~~GFf~l~   82 (349)
T d1gp6a_           3 VERVESLAKSGIISIPKEYIRPKEELESINDVFLEEKKEDGPQVPTIDLKNIESDDEKIRENCIEELKKASLDWGVMHLI   82 (349)
T ss_dssp             CCCHHHHHHTTCSSCCGGGSCCHHHHTTCCCHHHHHHCCCSCCCCEEECTTTTCSCHHHHHHHHHHHHHHHHHTSEEEEE
T ss_pred             CcchHHHHhCCCccCCHhhcCChhhcCCCCccccccccCCCCCcCeEEChhcCCCCHHHHHHHHHHHHHHHHhCCEEEEE
Confidence            35799999999999999999999998865311    112344799999987      12567899999999999999999


Q ss_pred             cCCCCHHHHHHHHHHHHHHhcCCHHHHhccccCCCCCCceeecccccccccccCCcccceeeeeccch-hhhccCC---c
Q 017959           89 NHGVPVELLESLKDAAHAFFNQTPGKKAVYRKGVSPSPLVKYGTSFVPEKEKALEWKDYISMVYTNDA-EALQQWP---K  164 (363)
Q Consensus        89 nhGi~~~~~~~~~~~~~~FF~lP~eeK~~~~~~~~~~~~~gy~~~~~~~~~~~~d~~e~~~~~~~p~~-~~~~~wP---~  164 (363)
                      ||||+.++++++++++++||+||.|+|+++......+...+|+...........+|.+.+.....+.. ..++.||   +
T Consensus        83 nHGI~~~li~~~~~~~~~FF~lP~eeK~k~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~wp~~~~  162 (349)
T d1gp6a_          83 NHGIPADLMERVKKAGEEFFSLSVEEKEKYANDQATGKIQGYGSKLANNASGQLEWEDYFFHLAYPEEKRDLSIWPKTPS  162 (349)
T ss_dssp             SCSCCHHHHHHHHHHHHHHHTSCHHHHGGGBCBGGGTBCSEEECCCCCSTTCCCCSCEEEEEEEESGGGCCGGGSCCSST
T ss_pred             ccCCCHHHHHHHHHHHHHHHcCCHHHHhhhhcccccCCccccccccccccccccchhhhhcccccccccccccccccccc
Confidence            99999999999999999999999999999965433223344544433334455677777654434433 4567888   5


Q ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcc-ccc---cccceeeecccCCCCCCCCCcCCccccccCCceEEEe
Q 017959          165 ECNIVALEYLRTSMKMVRKLLEVLFKNLGVTLDEPE-LDA---IIGFKMVNMNFYPTCPNPELTVGVGRHSDMGALTILL  240 (363)
Q Consensus       165 ~fr~~~~~y~~~~~~l~~~ll~~l~~~Lgl~~~~~~-~~~---~~~~~l~~~~~YPp~~~~~~~~g~~~HtD~~~lTlL~  240 (363)
                      .|++.+++|+++|.+++.+|+++++++||+++++|. ...   .....+| ++||||++.++..+|+++|||+|+||||+
T Consensus       163 ~f~e~~~~~~~~~~~la~~ll~~la~~Lgl~~~~~~~~~~~~~~~~~~lr-l~~Yp~~~~~~~~~g~~~HtD~g~lTlL~  241 (349)
T d1gp6a_         163 DYIEATSEYAKCLRLLATKVFKALSVGLGLEPDRLEKEVGGLEELLLQMK-INYYPKCPQPELALGVEAHTDVSALTFIL  241 (349)
T ss_dssp             THHHHHHHHHHHHHHHHHHHHHHHHHHTTSCTTHHHHHTTHHHHCEEEEE-EEEECCCSSTTTCCSEEEECCCSSEEEEE
T ss_pred             hHHHHHHHHHHHHHHHHHhhhHHHHHHcCCCHHHHHHHhccccccceeee-ecccccccchhhccccccCCCCcceEEEe
Confidence            699999999999999999999999999999999987 321   2233677 99999999988899999999999999999


Q ss_pred             eCCcCceEEEeCCCCCCCCCCCcEEEcCCCCCeEEEEccchhHHhhcCccccccccccCCCCCCeeEEEEeecCCCCCeE
Q 017959          241 QDGIGGLYVKVEEDIPDVGKKGEWMEIPPVPGALVINVGDTLQILSNGRYKSAEHRVRTTSSKSRVSIPIFTMPKPTVKI  320 (363)
Q Consensus       241 qd~v~GLqV~~~~~~~~~~~~g~W~~V~p~pgalvVniGD~le~lSnG~~kS~~HRVv~~~~~~R~Sia~F~~P~~d~~i  320 (363)
                      |+.++||||+.++         +|++|+|.+|++|||+||+||+||||+|||++|||+.+++++||||+||++|+.|++|
T Consensus       242 q~~~~GLqv~~~g---------~W~~V~p~~~a~vVNvGD~l~~~TnG~~~St~HRVv~~~~~~R~Si~~F~~p~~d~~i  312 (349)
T d1gp6a_         242 HNMVPGLQLFYEG---------KWVTAKCVPDSIVMHIGDTLEILSNGKYKSILHRGLVNKEKVRISWAVFCEPPKDKIV  312 (349)
T ss_dssp             ECSCCCEEEEETT---------EEEECCCCTTCEEEEECHHHHHHTTTSSCCCCEEECCCSSCCEEEEEEEEECCTTTCE
T ss_pred             ccCCcceeeecCC---------ceEEccCCCCCeeeeHHhHHHHHhCCCccCcCccccCCCCCCeEEEEEEecCCCccee
Confidence            9999999998766         9999999999999999999999999999999999999999999999999999999865


Q ss_pred             -ecCCcccccCC-CccCcccHHHHHHHHHh
Q 017959          321 -GPLPQLVEKEG-SRFREFLFQDYRNNFFS  348 (363)
Q Consensus       321 -~Pl~~~v~~~~-~~y~~~~~~ey~~~~~~  348 (363)
                       +|+|+|+++++ ++|+++|++||++.++.
T Consensus       313 ~~pl~~~v~~~~p~~y~~~t~~e~~~~rl~  342 (349)
T d1gp6a_         313 LKPLPEMVSVESPAKFPPRTFAQHIEHKLF  342 (349)
T ss_dssp             ECCCGGGCCSSSCCSSCCEEHHHHHHHHHH
T ss_pred             ecCCHHHcCCCCCCCCCCccHHHHHHHHHh
Confidence             89999999988 89999999999998774
>d1w9ya1 b.82.2.1 (A:2-308) 1-aminocyclopropane-1-carboxylate oxidase 1 {Petunia hybrida [TaxId: 4102]} Back     information, alignment and structure
>d1odma_ b.82.2.1 (A:) Isopenicillin N synthase {Emericella nidulans [TaxId: 162425]} Back     information, alignment and structure
>d1dcsa_ b.82.2.1 (A:) Deacetoxycephalosporin C synthase {Streptomyces clavuligerus [TaxId: 1901]} Back     information, alignment and structure
>d2iuwa1 b.82.2.10 (A:70-279) AlkB homolog 3 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure