Citrus Sinensis ID: 017982

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360---
Protein Sequence
MQSASVSAALPSSSCHYCYPVPNRFLHFRNLHLKKNLNSLSLSRNQIHAKNFCSLTLPTANSFSKEQEENLRKDNKLHPDQNHTFLDQFYSSADTNKLGNQDPESQNQEQDEEPRYNKDKYWTVLCTNMWWSQLKAALGQRINVEGIVSSTVVFAKDRHLALPHVTVPDIRYIDWAELQRRGFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKVIRHRVKKPAGTAEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGFLTILTEPLSLAEEPFIVRQVRKLEVTIVNRWFRRGLKPISHNLLPDAMQCVKDPPSLESNFIACNRS
Secondary Structure (PSIPRED)
cccccccccccccccccccccccccccccHHHcccccccEEcccccccccccccccccccccccHHHHHHHHccccccccccccHHHHHcccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHcccccccccEEccccccccHHHHHHccccEEEEcccccccccccccccHHHHHHHHHHHHHccccEEEEEcccccccccccHHHHHHHHccccEEEEEccccccHHHHHHHHHHHccccccEEEEcccHHHHHHHHHHcccEEEEEcccccccccHHHHHHHHHHHHHHHHHHHcccccccccccccHHHcccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccccEcEcccccccccEEEcccccccccccHHccccccEEEEccccccccccccccccccccccccccccccccccccHHHcccHHHHccccccccccccccccccccccccccccccccccccHcccHHHHHHHHHHcccccHHHHHHHHHHHHHcccccccccEcccHccccHHHHHHcccEEEEEEccccccccccccccHHHHHHHHHHHHHcccEEEEEEcccccccccccHHHHHHHHHHccccEEEccccccccHHHHHHHHHccccccEEEEccHHHHHHHHHHHcccEEEEEEEcccccccHHHHHHHHHHHHHHHHHHHccccccccccccccHHHcccccccccEEEEEccc
Coil and Loop (DISEMBL)
mqsasvsaalpssschycypvpnrflhFRNLHLKKnlnslslsrnqihaknfcsltlptansfsKEQEENlrkdnklhpdqnhtfldqfyssadtnklgnqdpesqnqeqdeeprynkdkyWTVLCTNMWWSQLKAALGQRINVEGIVSSTVVFAKdrhlalphvtvpdiryiDWAELQRrgfkgvvfdkdntltapysltlwgplsssieqcksvfghdiavfsnsaglyeydndASKARKLEGKIGIKVIRHrvkkpagtaeEIEKhfgcqssqlimvgdrpftdivygnrngfltilteplslaeepfIVRQVRKLEVTIVNRWFrrglkpishnllpdamqcvkdppslesnfiacnrs
Flexible Loop (DISEMBL)
mqsasvsaalpssschYCYPVPNRFLHFRNLHLKKNLNSLSLSRNQIHAKNFCSLTLPTANSFSKEQEENLRKDNKLHPDQNHTFLDQFYSSADTNKLgnqdpesqnqeqdeeprynKDKYWTVLCTNMWWSQLKAALGQRINVEGIVSSTVVFAKdrhlalphvtvpdiRYIDWAELQRRGFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKArklegkigikvirhrvkkpagtaeeiekhfgcqssqlimVGDRPFTDIVYGNRNGFLTILTEPLSLAEEPFIVRQVRKLEVTIVNRWFRRGLKPISHNLLPDAMQcvkdppslesnfiacnrs
Low Complexity Region (SEG)
MQsasvsaalpsssCHYCYPVPNRFLHFrnlhlkknlnslslsrnQIHAKNFCSLTLPTANSFSKEQEENLRKDNKLHPDQNHTFLDQFYSSADTNKLGNQDPESQNQEQDEEPRYNKDKYWTVLCTNMWWSQLKAALGQRINVEGIVSSTVVFAKDRHLALPHVTVPDIRYIDWAELQRRGFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKVIRHRVKKPAGTAEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGFLTILTEPLSLAEEPFIVRQVRKLEVTIVNRWFRRGLKPISHNLLPDAMQCVKDPPSLESNFIACNRS
Disordered region (IsUnstruct)
*************SCHYCYPVPNRFLHFRNLHLKKNLNSLSLSRNQIHAKNFCSLTL*************************************************************DKYWTVLCTNMWWSQLKAALGQRINVEGIVSSTVVFAKDRHLALPHVTVPDIRYIDWAELQRRGFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKVIRHRVKKPAGTAEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGFLTILTEPLSLAEEPFIVRQVRKLEVTIVNRWFRRGLKPISHNLLPDAMQCV****************
Disordered Region (DISOPRED)
*********LPSSSCHYCYPVPNRFLHFR**********LSLSRNQIHAKNFC**************************DQNHTFLDQFYSSAD******************************LCTNMWWSQLKAALGQRINVEGIVSSTVVFAKDRHLALPHVTVPDIRYIDWAELQRRGFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKVIRHRVKKPAGTAEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGFLTILTEPLSLAEEPFIVRQVRKLEVTIVNRWFRRGLKPISHNLLPDAM******PSLESNFIACN**
Disordered Region (DISEMBL)
***********SSSCHYCYPVPNRFLHFRNLHLKKNLNSLSLSRNQIHAKNFCSLTLPTAN***********KDNKLHPDQNHTFLDQFYSSADTNK*****************RYNKDKYWTVLCTNMWWSQLKAALGQRINVEGIVSSTVVFAKDRHLALPHVTVPDIRYIDWAELQRRGFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKVIRHRVKKPAGTAEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGFLTILTEPLSLAEEPFIVRQVRKLEVTIVNRWFRRGLKPISHNLLPDAMQCVKDPPSLESNFIACNRS
Disordered Region (DISPRO)
******SAALPSSSCHYCYPVPNRFLHFRNLHLKKNLNSLSLSRNQIHAKNFCSLTLPTANSFSKEQEENLRKDNKLHPDQNHTFLDQFYSSADT******D***********PRY******TVLCTNMWWSQLKAALGQRINVEGIVSSTVVFAKDRHLALPHVTVPDIRYIDWAELQRRGFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKVIRHRVKKPAGTAEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGFLTILTEPLSLAEEPFIVRQVRKLEVTIVNRWFRRGLKPISHNLLPDAMQCVKDPPSLESNFIAC***
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MQSASVSAALPSSSCHYCYPVPNRFLHFRNLHLKKNLNSLSLSRNQIHAKNFCSLTLPTANSFSKEQEENLRKDNKLHPDQNHTFLDQFYSSADTNKLGNQDPESQNQEQDEEPRYNKDKYWTVLCTNMWWSQLKAALGQRINVEGIVSSTVVFAKDRHLALPHVTVPDIRYIDWAELQRRGFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKVIRHRVKKPAGTAEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGFLTILTEPLSLAEEPFIVRQVRKLEVTIVNRWFRRGLKPISHNLLPDAMQCVKDPPSLESNFIACNRS
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	363	2.2.26 [Sep-21-2011]
P38812	185	Phosphatidylglycerophosph	yes	no	0.410	0.805	0.325	2e-10
Q9Y7U3	209	Probable phosphatidylglyc	yes	no	0.418	0.727	0.297	2e-09
P54452	172	Uncharacterized protein Y	yes	no	0.438	0.924	0.286	2e-08

>sp|P38812|GEP4_YEAST Phosphatidylglycerophosphatase GEP4, mitochondrial OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=GEP4 PE=1 SV=1

 Score = 66.6 bits (161), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 52/160 (32%), Positives = 77/160 (48%), Gaps = 11/160 (6%)

Query: 142 INVEGIVSSTVVFAKDRHLALPHVTVPDIRYIDWAELQRRGFKGVVFDKDNTLTAPYSLT 201
           +N+ G ++ T+    +  L  P + VP   + D         K VV DKDN +  P+   
Sbjct: 1   MNISGTLN-TLRLLYNPSLCKPSLVVP--TFNDLPIPIHDSIKAVVLDKDNCIAFPHDDK 57

Query: 202 LWGPLSSSIEQCKSVFGHD-IAVFSNSAGLYEYDNDASKARKLEGKIGIKVIRHRVKKPA 260
           +W       E  +S + +  + + SN+AG    D D S+A+ LE K GI V+RH  KKP 
Sbjct: 58  IWPDYLQHWETLRSKYSNKALLIVSNTAG-SNSDKDYSQAKLLEDKTGIPVLRHSTKKP- 115

Query: 261 GTAEEIEKHFG-----CQSSQLIMVGDRPFTDIVYGNRNG 295
           G   EI  +F          ++ +VGDR FTDI+  N  G
Sbjct: 116 GCHNEILDYFYRNKTITNPKEVAVVGDRLFTDILMANLMG 155

Phosphatidylglycerophosphatase involved in the biosynthesis of cardiolipin (CL), a unique dimeric phosphoglycerolipid predominantly present in mitochondrial membranes and which has important functions for cellular energy metabolism, mitochondrial dynamics and the initiation of apoptotic pathways. Required for the stability of respiratory chain supercomplexes and for growth at elevated temperature, in presence of ethidium bromide or in absence of prohibitins.
Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292)
EC: 3EC: .EC: 1EC: .EC: 3EC: .EC: 2EC: 7

>sp|Q9Y7U3|GEP4_SCHPO Probable phosphatidylglycerophosphatase, mitochondrial OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=gep4 PE=3 SV=2

 Score = 63.9 bits (154), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 50/168 (29%), Positives = 76/168 (45%), Gaps = 16/168 (9%)

Query: 142 INVEGIVSSTVVFAKDRHLALPHVTVP-------DIRYIDWAELQR-RGFKGVVFDKDNT 193
           IN+EGI +        R + +PH T P       +I Y    + Q     + +V DKDN 
Sbjct: 3   INIEGIQAFCQTIRNPRRI-IPHATFPTFSQIPCNINYFLEQKFQVPVDIRALVLDKDNC 61

Query: 194 LTAPYSLTLWGPLSSSIEQCKSVFGH-DIAVFSNSAGLYEYDNDASKARKLEGKIGIKVI 252
           +T P   T+       I + ++++G  ++ + SNS G  + D     A   + K  I V+
Sbjct: 62  ITLPNETTIAEAELKKIREFQNIYGEKNVILLSNSIGTRKLDPTGELAAHFQQKWNIPVV 121

Query: 253 RHRVKKPAGTAEEIEKHFGCQS-----SQLIMVGDRPFTDIVYGNRNG 295
           RH   KP  T EE+  +    S     SQ++ +GDR  TDI   N  G
Sbjct: 122 RHSKLKPLCT-EELYTYLSNNSHVSSASQILFIGDRLLTDITLANIMG 168

Phosphatidylglycerophosphatase involved in the biosynthesis of cardiolipin (CL), a unique dimeric phosphoglycerolipid predominantly present in mitochondrial membranes and which has important functions for cellular energy metabolism, mitochondrial dynamics and the initiation of apoptotic pathways.

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 2

EC: 7

>sp|P54452|YQEG_BACSU Uncharacterized protein YqeG OS=Bacillus subtilis (strain 168) GN=yqeG PE=4 SV=1

 Score = 60.8 bits (146), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 49/171 (28%), Positives = 84/171 (49%), Gaps = 12/171 (7%)

Query: 162 LPHVTVPDIRYIDWAELQRRGFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDI 221
           LP   V +I +I   +L+ R  KG++ D DNTL           L    E+ K   G  +
Sbjct: 7   LPDEFVKNIFHITPEKLKERNVKGIITDLDNTLVEWDRPNATPRLIEWFEEMKE-HGIKV 65

Query: 222 AVFSNSAGLYEYDNDASKARKLEGKIGIKVIRHRVKKPAGTA-EEIEKHFGCQSSQLIMV 280
            + SN        N+  + +     +GI  I ++ +KP G A     ++   +    +++
Sbjct: 66  TIVSN--------NNERRVKLFSEPLGIPFI-YKARKPMGKAFNRAVRNMELKKEDCVVI 116

Query: 281 GDRPFTDIVYGNRNGFLTILTEPLSLAEEPFIVRQVRKLEVTIVNRWFRRG 331
           GD+  TD++ GNRNG+ TIL  P++ + + FI R  R++E  I++   R+G
Sbjct: 117 GDQLLTDVLGGNRNGYHTILVVPVA-SSDGFITRFNRQVERRILSALKRKG 166

Bacillus subtilis (strain 168) (taxid: 224308)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	363
225446869	344	PREDICTED: uncharacterized protein LOC10	0.920	0.970	0.641	1e-120
356508442	355	PREDICTED: uncharacterized protein LOC10	0.953	0.974	0.602	1e-115
357443913	352	hypothetical protein MTR_1g100570 [Medic	0.944	0.974	0.603	1e-115
396582339	354	haloacid dehalogenase superfamily protei	0.950	0.974	0.593	1e-114
449444759	348	PREDICTED: uncharacterized protein LOC10	0.925	0.965	0.596	1e-113
224062762	225	predicted protein [Populus trichocarpa]	0.614	0.991	0.856	1e-112
255558724	355	catalytic, putative [Ricinus communis] g	0.837	0.856	0.656	1e-110
296086317	225	unnamed protein product [Vitis vinifera]	0.619	1.0	0.822	1e-107
224085296	225	predicted protein [Populus trichocarpa]	0.619	1.0	0.804	1e-107
297820718	338	haloacid dehalogenase superfamily protei	0.922	0.991	0.593	1e-105

>gi|225446869|ref|XP_002283859.1| PREDICTED: uncharacterized protein LOC100252338 [Vitis vinifera]

 Score =  437 bits (1125), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 227/354 (64%), Positives = 262/354 (74%), Gaps = 20/354 (5%)

Query: 10  LPSSSC---HYC-YPVPNRFLHFRNLHLK---KNLNSLSLSRNQIHAKNFCSLTLPTANS 62
           + S SC   H C +P+PN+F + R L  +   +NL S    ++Q H    C+LTL   NS
Sbjct: 1   MQSCSCAPWHICKFPIPNQFHNHRYLCPRLYHRNLPSWP-CKHQTHLTKICALTLHPTNS 59

Query: 63  FSKEQEENLRKDNKL---HPDQNHTFLDQFYSSADTNKLGNQDPESQNQEQDEEPRYNKD 119
             KEQE    K N      P Q + FL + YSS +         +S+  +  EE + N  
Sbjct: 60  CRKEQEIKRNKSNSQPSHTPSQTNIFLHELYSSTENFN------QSKTTQDPEERKINSS 113

Query: 120 KYWTVLCTNMWWSQLKAALGQRINVEGIVSSTVVFAKDRHLALPHVTVPDIRYIDWAELQ 179
           +   V+ TNMWW+ LKAALGQR N EGI+ S VV AKDRHLALPHV VPDIRYIDWAEL 
Sbjct: 114 R---VIFTNMWWADLKAALGQRFNFEGIICSAVVLAKDRHLALPHVAVPDIRYIDWAELH 170

Query: 180 RRGFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASK 239
           RRGFKGVVFDKDNTLT PYSLTLW P+ SS++QCKSVFGHDI VFSNSAGLYEYD D SK
Sbjct: 171 RRGFKGVVFDKDNTLTKPYSLTLWEPIGSSLQQCKSVFGHDIGVFSNSAGLYEYDPDGSK 230

Query: 240 ARKLEGKIGIKVIRHRVKKPAGTAEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGFLTI 299
           AR LEG IGI+VIRHRVKKPAGTAEEIEKHFGC SS LIMVGDRPFTDIV+GNRNGFLTI
Sbjct: 231 ARVLEGAIGIEVIRHRVKKPAGTAEEIEKHFGCASSLLIMVGDRPFTDIVFGNRNGFLTI 290

Query: 300 LTEPLSLAEEPFIVRQVRKLEVTIVNRWFRRGLKPISHNLLPDAMQCVKDPPSL 353
           LTEPLSLAEEPF+V+QVRKLE  +VNR ++RGLKP +H+LLPDA +CVK+PP L
Sbjct: 291 LTEPLSLAEEPFLVKQVRKLEAFVVNRCYKRGLKPTNHSLLPDAQECVKNPPPL 344

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356508442|ref|XP_003522966.1| PREDICTED: uncharacterized protein LOC100820364 [Glycine max]

 Score =  421 bits (1083), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 215/357 (60%), Positives = 266/357 (74%), Gaps = 11/357 (3%)

Query: 1   MQSASVSAALPSSSCHYCYPVPNRFLHFRNLHLKKNLNSLSLSR--NQIHAKNFCSLTLP 58
           M S + +A LPS  C Y   +P+      +   K+ L +LSL+   ++I  +NF  L+LP
Sbjct: 1   MLSTTAAAQLPS--CWYL--IPSHLNVHHHAQQKRKLTTLSLANADSRIPLRNFYGLSLP 56

Query: 59  TANSFSKEQEEN--LRKDNKLHPDQNHTFLDQFYSSADTNKLGNQDPESQNQEQ---DEE 113
             ++ SK +E N   R ++ L+ +  H    QF+  +DT    NQ+P ++N  Q   DE+
Sbjct: 57  QTHNCSKGKESNNRARYNSNLNQNHRHLLFLQFFPDSDTEDSNNQNPRTRNHCQHQVDEQ 116

Query: 114 PRYNKDKYWTVLCTNMWWSQLKAALGQRINVEGIVSSTVVFAKDRHLALPHVTVPDIRYI 173
             + ++K   +L +NMWW  +KAALGQRIN+EGI+ ST+V  KD  LA+PH++VPDIRY+
Sbjct: 117 REFKENKEARLLFSNMWWVDVKAALGQRINLEGILCSTMVILKDPKLAMPHISVPDIRYV 176

Query: 174 DWAELQRRGFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEY 233
           DWAEL+R+GFKGVVFDKDNT+TAPYSL  W PL SS+E CKS FGHDIAVFSNSAGL+EY
Sbjct: 177 DWAELRRKGFKGVVFDKDNTITAPYSLKSWPPLESSLECCKSEFGHDIAVFSNSAGLHEY 236

Query: 234 DNDASKARKLEGKIGIKVIRHRVKKPAGTAEEIEKHFGCQSSQLIMVGDRPFTDIVYGNR 293
           D+D SKAR LEG IGIKVIRHRVKKPAGTAEEIEKHFGC++SQLIMVGDRPFTDIVYGNR
Sbjct: 237 DHDGSKARMLEGAIGIKVIRHRVKKPAGTAEEIEKHFGCEASQLIMVGDRPFTDIVYGNR 296

Query: 294 NGFLTILTEPLSLAEEPFIVRQVRKLEVTIVNRWFRRGLKPISHNLLPDAMQCVKDP 350
           NGFLTILTEPLSLAEEPFIV+QVRKLE + V+ W RRGL P+S  LL D   CVK+P
Sbjct: 297 NGFLTILTEPLSLAEEPFIVKQVRKLETSFVSFWSRRGLDPLSQKLLSDPKPCVKEP 353

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357443913|ref|XP_003592234.1| hypothetical protein MTR_1g100570 [Medicago truncatula] gi|357462099|ref|XP_003601331.1| hypothetical protein MTR_3g079530 [Medicago truncatula] gi|355481282|gb|AES62485.1| hypothetical protein MTR_1g100570 [Medicago truncatula] gi|355490379|gb|AES71582.1| hypothetical protein MTR_3g079530 [Medicago truncatula]

 Score =  421 bits (1082), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 216/358 (60%), Positives = 257/358 (71%), Gaps = 15/358 (4%)

Query: 1   MQSASVSAALPSSSCHYCYPVPNRFLHFRNLHLKKNLNSLSLSR--NQIHAKNFCSLTLP 58
           M S S +A LPS S H    +P+      +   K+ L +LSL+   +Q+  +NF   +LP
Sbjct: 1   MLSTSAAAQLPSCSYH----IPSH----HHAQRKRKLTTLSLANADSQVPLRNFYGPSLP 52

Query: 59  TANSFSKEQEENLRKDNKLHPDQN--HTFLDQFYSSADTNKLGNQDPESQNQEQ---DEE 113
              S +K  E N R     + +QN  H FL +++S AD+    NQ+PE++N  Q   D +
Sbjct: 53  QTQSCNKGLESNYRSRYNSNSNQNDKHLFLIKYFSLADSEDTSNQNPETRNHSQRQPDRQ 112

Query: 114 PRYNKDKYWTVLCTNMWWSQLKAALGQRINVEGIVSSTVVFAKDRHLALPHVTVPDIRYI 173
             + + K  + L T MWW+ LKAA GQRIN EGI+ ST+V  KD  L+LPH++VPDIRYI
Sbjct: 113 REFKEHKKDSALFTKMWWADLKAAFGQRINFEGILCSTMVILKDPKLSLPHISVPDIRYI 172

Query: 174 DWAELQRRGFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEY 233
           DWA L R+GFKGVVFDKDNT+T PYSLT W PL SS+E CKS FG DIAVFSNSAGL EY
Sbjct: 173 DWAALHRKGFKGVVFDKDNTITVPYSLTPWPPLESSLESCKSEFGQDIAVFSNSAGLREY 232

Query: 234 DNDASKARKLEGKIGIKVIRHRVKKPAGTAEEIEKHFGCQSSQLIMVGDRPFTDIVYGNR 293
           D+D SKAR LEG IGIKVIRHRVKKP GTAEEIEKHFGC++S+LIMVGDRPFTDIVYGNR
Sbjct: 233 DHDGSKARNLEGTIGIKVIRHRVKKPGGTAEEIEKHFGCEASELIMVGDRPFTDIVYGNR 292

Query: 294 NGFLTILTEPLSLAEEPFIVRQVRKLEVTIVNRWFRRGLKPISHNLLPDAMQCVKDPP 351
           NGFLTI TEPLSLAEEPFIV+QVRKLE T V  W RRGLKP+   LLPD   CVK+PP
Sbjct: 293 NGFLTIWTEPLSLAEEPFIVKQVRKLETTFVKYWSRRGLKPLDQKLLPDPRHCVKEPP 350

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|396582339|gb|AFN88203.1| haloacid dehalogenase superfamily protein [Phaseolus vulgaris]

 Score =  417 bits (1072), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 212/357 (59%), Positives = 259/357 (72%), Gaps = 12/357 (3%)

Query: 1   MQSASVSAALPSSSCHYCYPVPNRFLHFRNLHLKKNLNSLSLSR--NQIHAKNFCSLTLP 58
           M S + +A LPS   H    +P+      +   K+ L +LSL+   +QI  +NFC L+LP
Sbjct: 1   MLSTTAAAQLPSCWYH----IPSHLNVHHHAQQKRKLTTLSLANADSQISLRNFCGLSLP 56

Query: 59  TANSFSKEQEENLRK--DNKLHPDQNHTFLDQFYSSADTNKLGNQDPESQNQEQ---DEE 113
             ++ SK QE N R   ++ L+ +  H    QF+  +DT    NQ+  ++N  Q   D++
Sbjct: 57  QTHNCSKGQESNNRSRYNSNLNQNHKHLLFLQFFPDSDTEDTNNQNLRTRNHYQHQVDKQ 116

Query: 114 PRYNKDKYWTVLCTNMWWSQLKAALGQRINVEGIVSSTVVFAKDRHLALPHVTVPDIRYI 173
             + ++       TNMWW  +KAALGQRIN+EGI+ ST+V  KD  LA+PH++VPDIRY+
Sbjct: 117 GEFKENNKARPF-TNMWWVDVKAALGQRINLEGIICSTMVILKDPKLAMPHISVPDIRYV 175

Query: 174 DWAELQRRGFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEY 233
           DWAEL+R+GFKGVVFDKDNTLTAPYSL  W PL SS+E CK  FGHDIAVFSNSAGL+EY
Sbjct: 176 DWAELRRKGFKGVVFDKDNTLTAPYSLKPWPPLESSLESCKLEFGHDIAVFSNSAGLHEY 235

Query: 234 DNDASKARKLEGKIGIKVIRHRVKKPAGTAEEIEKHFGCQSSQLIMVGDRPFTDIVYGNR 293
           D+D SKAR LEG IGIKVIRHRVKKPAGTAEEIEKHFGC++S+LIMVGDRPFTDIVYGNR
Sbjct: 236 DHDGSKARMLEGAIGIKVIRHRVKKPAGTAEEIEKHFGCEASRLIMVGDRPFTDIVYGNR 295

Query: 294 NGFLTILTEPLSLAEEPFIVRQVRKLEVTIVNRWFRRGLKPISHNLLPDAMQCVKDP 350
           NGFLTILTEP SL EEPFIV+QVRKLE + V  W RRGLKP+   LLPD   CVK+P
Sbjct: 296 NGFLTILTEPFSLVEEPFIVKQVRKLETSFVRYWSRRGLKPLGQKLLPDPKPCVKEP 352

Source: Phaseolus vulgaris

Species: Phaseolus vulgaris

Genus: Phaseolus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449444759|ref|XP_004140141.1| PREDICTED: uncharacterized protein LOC101213822 [Cucumis sativus] gi|449515655|ref|XP_004164864.1| PREDICTED: uncharacterized protein LOC101230953 [Cucumis sativus]

 Score =  415 bits (1066), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 207/347 (59%), Positives = 253/347 (72%), Gaps = 11/347 (3%)

Query: 7   SAALPSSSCHYCYPVPNRFLHFRNLHLKKNLNSLSLSRNQIHAKNFC--SLTLPTANSFS 64
           + +LPS  C     +P    HF   H  K+ + +SL  N     + C  S T   A S S
Sbjct: 8   AVSLPS--CSPSRSIPFHQTHFSRKH--KSFSPISLITNCSQFNDLCVYSFTPTPATSCS 63

Query: 65  KEQEENLRKDNKLHPDQNHTFLDQFYSSADTNKLGNQDPESQNQEQD--EEPRYNKDKYW 122
           K    N   +    P +N     QFY S ++N + +Q+P ++NQ++D  +E +    K  
Sbjct: 64  KNHNSN---NADTDPSRNQRLFQQFYLSINSNNVPDQNPSTENQKEDLGQEDQNRGVKKS 120

Query: 123 TVLCTNMWWSQLKAALGQRINVEGIVSSTVVFAKDRHLALPHVTVPDIRYIDWAELQRRG 182
               TNMWW  LK+A+GQR+N+EGIVSS  V  KDRHLALPHV VPD+RYIDW ELQRRG
Sbjct: 121 KGPFTNMWWVNLKSAIGQRLNIEGIVSSAAVITKDRHLALPHVVVPDVRYIDWGELQRRG 180

Query: 183 FKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARK 242
           FKGVVFDKDNT+TAPY LT+W PL SS+EQCKSVFGH++AVFSNSAGLYEYD+D SKA+ 
Sbjct: 181 FKGVVFDKDNTITAPYCLTIWAPLKSSLEQCKSVFGHNVAVFSNSAGLYEYDHDGSKAKA 240

Query: 243 LEGKIGIKVIRHRVKKPAGTAEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGFLTILTE 302
           +E  IGIKVIRHRVKKPAGTAEEIEKHFG  SSQLIMVGDRPFTD+V+GNRNGFLTILTE
Sbjct: 241 MERSIGIKVIRHRVKKPAGTAEEIEKHFGFTSSQLIMVGDRPFTDVVFGNRNGFLTILTE 300

Query: 303 PLSLAEEPFIVRQVRKLEVTIVNRWFRRGLKPISHNLLPDAMQCVKD 349
           PLS++ E F+VRQVRKLE+ ++NRW ++G++PISH LLPD  QC+KD
Sbjct: 301 PLSVSGETFVVRQVRKLEMFLLNRWLKQGVRPISHRLLPDTKQCIKD 347

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224062762|ref|XP_002300885.1| predicted protein [Populus trichocarpa] gi|222842611|gb|EEE80158.1| predicted protein [Populus trichocarpa]

 Score =  410 bits (1055), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 191/223 (85%), Positives = 206/223 (92%)

Query: 129 MWWSQLKAALGQRINVEGIVSSTVVFAKDRHLALPHVTVPDIRYIDWAELQRRGFKGVVF 188
           MWW+ L+AALGQRINVEGIVSS  VF KDRHLALPHV VPDIRYIDW  LQ RGFKGVVF
Sbjct: 1   MWWTDLRAALGQRINVEGIVSSASVFVKDRHLALPHVVVPDIRYIDWGGLQARGFKGVVF 60

Query: 189 DKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIG 248
           DKDNT+T PYSLTLWGPLS SIE+CKSVFG+DIAVFSNSAGL+EYD+D SKAR LE  IG
Sbjct: 61  DKDNTITVPYSLTLWGPLSPSIERCKSVFGNDIAVFSNSAGLFEYDHDGSKARALEKAIG 120

Query: 249 IKVIRHRVKKPAGTAEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGFLTILTEPLSLAE 308
           IKVIRHRVKKPAGT+EEIEKHFGC+SSQLIMVGDRPFTDIVYGNRNGFLT+LT+PLSLAE
Sbjct: 121 IKVIRHRVKKPAGTSEEIEKHFGCKSSQLIMVGDRPFTDIVYGNRNGFLTVLTKPLSLAE 180

Query: 309 EPFIVRQVRKLEVTIVNRWFRRGLKPISHNLLPDAMQCVKDPP 351
           EPFIVRQVRKLE +++  WF+RGLKPISHNLLPDAMQCVKDPP
Sbjct: 181 EPFIVRQVRKLETSLMGYWFKRGLKPISHNLLPDAMQCVKDPP 223

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255558724|ref|XP_002520386.1| catalytic, putative [Ricinus communis] gi|223540433|gb|EEF42002.1| catalytic, putative [Ricinus communis]

 Score =  403 bits (1036), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 206/314 (65%), Positives = 240/314 (76%), Gaps = 10/314 (3%)

Query: 8   AALPSSSCHY--CYPVPNRFLHFRNLHLKKNLNSLSLSRNQIHAKNFCSLTL-PTANSFS 64
           A LP+ +C     + +P+RF   R   +K    S+S+SR Q H+KN CS+TL PT+   +
Sbjct: 9   APLPNCNCPIPIAHILPHRFHRRR---IKPTSISISISRYQTHSKNLCSITLHPTSKCNN 65

Query: 65  KEQEENLRKDNKLHPDQNHTFLDQFYSSADTNKLGNQDPESQNQEQD---EEPRYNKDKY 121
            + +EN       HP QN    DQF SS D+  + N++PE+QNQEQ+   EE R N  K 
Sbjct: 66  NKDQENYNTSYS-HPAQNRLLFDQFQSSIDSVPISNKNPETQNQEQEQRNEEKRENPTKK 124

Query: 122 WTVLCTNMWWSQLKAALGQRINVEGIVSSTVVFAKDRHLALPHVTVPDIRYIDWAELQRR 181
              L TNMWW  LKAALGQRINVEGI++S  VF K++HL LPHV+V DIRYIDWAEL +R
Sbjct: 125 RKGLLTNMWWVDLKAALGQRINVEGIIASVSVFVKEQHLTLPHVSVRDIRYIDWAELHQR 184

Query: 182 GFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKAR 241
           GFKGVVFDKDNT+T PY+LTL G L SSIEQCKSVFG+D+AVFSNSAGLYEYD+D SKAR
Sbjct: 185 GFKGVVFDKDNTITVPYTLTLCGYLQSSIEQCKSVFGNDLAVFSNSAGLYEYDHDGSKAR 244

Query: 242 KLEGKIGIKVIRHRVKKPAGTAEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGFLTILT 301
            LE  IGIKVIRHRVKKPAGTAEEIEKHFGC+SSQL+MVGDRPFTD+VYGNRNGF TILT
Sbjct: 245 ALEKAIGIKVIRHRVKKPAGTAEEIEKHFGCKSSQLVMVGDRPFTDVVYGNRNGFFTILT 304

Query: 302 EPLSLAEEPFIVRQ 315
           EPLSL EEPFIVRQ
Sbjct: 305 EPLSLTEEPFIVRQ 318

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|296086317|emb|CBI31758.3| unnamed protein product [Vitis vinifera]

 Score =  395 bits (1016), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 185/225 (82%), Positives = 201/225 (89%)

Query: 129 MWWSQLKAALGQRINVEGIVSSTVVFAKDRHLALPHVTVPDIRYIDWAELQRRGFKGVVF 188
           MWW+ LKAALGQR N EGI+ S VV AKDRHLALPHV VPDIRYIDWAEL RRGFKGVVF
Sbjct: 1   MWWADLKAALGQRFNFEGIICSAVVLAKDRHLALPHVAVPDIRYIDWAELHRRGFKGVVF 60

Query: 189 DKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIG 248
           DKDNTLT PYSLTLW P+ SS++QCKSVFGHDI VFSNSAGLYEYD D SKAR LEG IG
Sbjct: 61  DKDNTLTKPYSLTLWEPIGSSLQQCKSVFGHDIGVFSNSAGLYEYDPDGSKARVLEGAIG 120

Query: 249 IKVIRHRVKKPAGTAEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGFLTILTEPLSLAE 308
           I+VIRHRVKKPAGTAEEIEKHFGC SS LIMVGDRPFTDIV+GNRNGFLTILTEPLSLAE
Sbjct: 121 IEVIRHRVKKPAGTAEEIEKHFGCASSLLIMVGDRPFTDIVFGNRNGFLTILTEPLSLAE 180

Query: 309 EPFIVRQVRKLEVTIVNRWFRRGLKPISHNLLPDAMQCVKDPPSL 353
           EPF+V+QVRKLE  +VNR ++RGLKP +H+LLPDA +CVK+PP L
Sbjct: 181 EPFLVKQVRKLEAFVVNRCYKRGLKPTNHSLLPDAQECVKNPPPL 225

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224085296|ref|XP_002307540.1| predicted protein [Populus trichocarpa] gi|222856989|gb|EEE94536.1| predicted protein [Populus trichocarpa]

 Score =  395 bits (1015), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 181/225 (80%), Positives = 203/225 (90%)

Query: 129 MWWSQLKAALGQRINVEGIVSSTVVFAKDRHLALPHVTVPDIRYIDWAELQRRGFKGVVF 188
           MWW  L+A   QRINVEGI SS  V  KD+H+ALPHV VPDIRYIDW ELQRRGFKGVVF
Sbjct: 1   MWWKDLRATFSQRINVEGIGSSASVLVKDQHMALPHVLVPDIRYIDWGELQRRGFKGVVF 60

Query: 189 DKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIG 248
           DKDNT+T PYSLT+W PL +SIE+CKSVFG+DIAVFSNSAGL+EYD+D SKAR LE  IG
Sbjct: 61  DKDNTITVPYSLTIWDPLDASIERCKSVFGNDIAVFSNSAGLFEYDHDDSKARALEKAIG 120

Query: 249 IKVIRHRVKKPAGTAEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGFLTILTEPLSLAE 308
           IKVIRHRVKKPAGTAEEIEKHFGC+SSQL+MVGDRPFTDIVYGN+NGFLT+LT+PLSLAE
Sbjct: 121 IKVIRHRVKKPAGTAEEIEKHFGCKSSQLVMVGDRPFTDIVYGNQNGFLTVLTKPLSLAE 180

Query: 309 EPFIVRQVRKLEVTIVNRWFRRGLKPISHNLLPDAMQCVKDPPSL 353
           EPFIVRQVRKLE++++N W +RG+KPISHNLLPDAM+CVKDPP L
Sbjct: 181 EPFIVRQVRKLEMSLMNYWLKRGMKPISHNLLPDAMECVKDPPPL 225

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297820718|ref|XP_002878242.1| haloacid dehalogenase superfamily protein [Arabidopsis lyrata subsp. lyrata] gi|297324080|gb|EFH54501.1| haloacid dehalogenase superfamily protein [Arabidopsis lyrata subsp. lyrata]

 Score =  386 bits (992), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 204/344 (59%), Positives = 247/344 (71%), Gaps = 9/344 (2%)

Query: 12  SSSCHYCYPVPNRFLHFRNLHLKKNLNSLSLSRNQIHAKNFCSLTLPTANSFSKEQEENL 71
           ++S  + YP+P  FL     H K+N N +S S   I      S +L T  +  + Q++NL
Sbjct: 2   AASTSFYYPIPKSFLLSPPRH-KRNPNLISCSTKPI-CSPPPSSSLQTTTT-HRSQKQNL 58

Query: 72  RKDNKLHPDQNHTFLDQFYSSADTNKLGNQDPESQNQEQDEE--PRYNKDKYWTVLCTNM 129
           R    L   ++   L QF S  +     N+ PE  + E  E   PR   +     + +NM
Sbjct: 59  R----LPTFEDSFLLYQFSSPTEDPGFSNRIPEQFDGEPRELVLPRVEDNNKGLAISSNM 114

Query: 130 WWSQLKAALGQRINVEGIVSSTVVFAKDRHLALPHVTVPDIRYIDWAELQRRGFKGVVFD 189
           WW+ LKAALGQRINVEGIVSS  V  KDR L LPHV+V D+RYIDW EL+R+GFKGVVFD
Sbjct: 115 WWADLKAALGQRINVEGIVSSVSVVVKDRQLVLPHVSVKDLRYIDWGELKRKGFKGVVFD 174

Query: 190 KDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGI 249
           KDNTLTAPYSL +W PL  SIE+CK+VFGHDIAVFSNSAGL EYD+D SKA+ LE +IGI
Sbjct: 175 KDNTLTAPYSLAIWPPLRPSIERCKAVFGHDIAVFSNSAGLTEYDHDDSKAKALEAEIGI 234

Query: 250 KVIRHRVKKPAGTAEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGFLTILTEPLSLAEE 309
           +V+RHRVKKPAGTAEE+EKHFGC SS+LIMVGDRPFTDIVYGNRNGFLT+LTEPLS AEE
Sbjct: 235 RVLRHRVKKPAGTAEEVEKHFGCASSELIMVGDRPFTDIVYGNRNGFLTVLTEPLSRAEE 294

Query: 310 PFIVRQVRKLEVTIVNRWFRRGLKPISHNLLPDAMQCVKDPPSL 353
           PFIVRQVR+LE+ ++ RW R+GLKP+ H+L+ D  Q VK P  L
Sbjct: 295 PFIVRQVRRLELALLKRWLRKGLKPVDHSLVSDVTQFVKVPSDL 338

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	363
TAIR|locus:2099104	343	AT3G58830 "AT3G58830" [Arabido	0.837	0.886	0.612	4.7e-96
SGD|S000001142	185	GEP4 "Mitochondrial phosphatid	0.410	0.805	0.325	2.2e-12
POMBASE|SPCC645.02	209	gep4 "mitochondrial matrix PGP	0.418	0.727	0.297	6.2e-11
TIGR_CMR|BA_4563	170	BA_4563 "hydrolase, HAD subfam	0.446	0.952	0.281	1.3e-10
UNIPROTKB|G4N1T8	216	MGG_09486 "HAD superfamily pho	0.415	0.699	0.299	3.1e-09
TIGR_CMR|CHY_0622	182	CHY_0622 "hydrolase, HAD subfa	0.435	0.868	0.241	1.1e-06

TAIR|locus:2099104 AT3G58830 "AT3G58830" [Arabidopsis thaliana (taxid:3702)]

 Score = 955 (341.2 bits), Expect = 4.7e-96, P = 4.7e-96
 Identities = 190/310 (61%), Positives = 227/310 (73%)

Query:    50 KNFCSLTLPTANSFSKEQEENLRKDNKLH---PDQNHTFL-DQFYSSADTNKLGNQDPES 105
             K  CS   P+++S S  Q     +  K +   P    +FL  QF S  +     N+ PE 
Sbjct:    34 KPICSPPPPSSSSSSPLQTTTTHRSQKQNLRLPTFEDSFLLYQFSSPTEDPGFSNRIPEQ 93

Query:   106 QNQEQDEE--PRYNKDKYWTVLCTNMWWSQLKAALGQRINVEGIVSSTVVFAKDRHLALP 163
              + E  E   PR   +     + +NMWW+ LKAALGQRIN+EGIVSS  V  KDR   LP
Sbjct:    94 FDGEPRELVLPRVEDNNKGLAISSNMWWADLKAALGQRINIEGIVSSVSVVVKDRQFVLP 153

Query:   164 HVTVPDIRYIDWAELQRRGFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAV 223
             HV+V D+RYIDW  L+R+GFKGVVFDKDNTLTAPYSL +W PL  SIE+CK+VFGHDIAV
Sbjct:   154 HVSVKDLRYIDWEVLKRKGFKGVVFDKDNTLTAPYSLAIWPPLRPSIERCKAVFGHDIAV 213

Query:   224 FSNSAGLYEYDNDASKARKLEGKIGIKVIRHRVKKPAGTAEEIEKHFGCQSSQLIMVGDR 283
             FSNSAGL EYD+D SKA+ LE +IGI+V+RHRVKKPAGTAEE+EKHFGC SS+LIMVGDR
Sbjct:   214 FSNSAGLTEYDHDDSKAKALEAEIGIRVLRHRVKKPAGTAEEVEKHFGCTSSELIMVGDR 273

Query:   284 PFTDIVYGNRNGFLTILTEPLSLAEEPFIVRQVRKLEVTIVNRWFRRGLKPISHNLLPDA 343
             PFTDIVYGNRNGFLT+LTEPLS AEEPFIVRQVR+LE+ ++ RW R+GLKP+ H+L+ D 
Sbjct:   274 PFTDIVYGNRNGFLTVLTEPLSRAEEPFIVRQVRRLELALLKRWLRKGLKPVDHSLVSDI 333

Query:   344 MQCVKDPPSL 353
              Q VK P  L
Sbjct:   334 TQFVKVPSDL 343

GO:0003824 "catalytic activity" evidence=ISS

GO:0005739 "mitochondrion" evidence=ISM

SGD|S000001142 GEP4 "Mitochondrial phosphatidylglycerophosphatase (PGP phosphatase)" [Saccharomyces cerevisiae (taxid:4932)]

 Score = 170 (64.9 bits), Expect = 2.2e-12, P = 2.2e-12
 Identities = 52/160 (32%), Positives = 77/160 (48%)

Query:   142 INVEGIVSSTVVFAKDRHLALPHVTVPDIRYIDWAELQRRGFKGVVFDKDNTLTAPYSLT 201
             +N+ G ++ T+    +  L  P + VP     D         K VV DKDN +  P+   
Sbjct:     1 MNISGTLN-TLRLLYNPSLCKPSLVVPTFN--DLPIPIHDSIKAVVLDKDNCIAFPHDDK 57

Query:   202 LWGPLSSSIEQCKSVFGHD-IAVFSNSAGLYEYDNDASKARKLEGKIGIKVIRHRVKKPA 260
             +W       E  +S + +  + + SN+AG    D D S+A+ LE K GI V+RH  KKP 
Sbjct:    58 IWPDYLQHWETLRSKYSNKALLIVSNTAGSNS-DKDYSQAKLLEDKTGIPVLRHSTKKP- 115

Query:   261 GTAEEIEKHFGCQSS-----QLIMVGDRPFTDIVYGNRNG 295
             G   EI  +F    +     ++ +VGDR FTDI+  N  G
Sbjct:   116 GCHNEILDYFYRNKTITNPKEVAVVGDRLFTDILMANLMG 155

GO:0005743 "mitochondrial inner membrane" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0046838 "phosphorylated carbohydrate dephosphorylation" evidence=IMP

GO:0032049 "cardiolipin biosynthetic process" evidence=IMP

GO:0005759 "mitochondrial matrix" evidence=IDA

GO:0008962 "phosphatidylglycerophosphatase activity" evidence=IEA;IGI;IMP;IDA

GO:0006655 "phosphatidylglycerol biosynthetic process" evidence=IEA

GO:0006629 "lipid metabolic process" evidence=IEA

GO:0008654 "phospholipid biosynthetic process" evidence=IEA

GO:0016787 "hydrolase activity" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA;IDA

POMBASE|SPCC645.02 gep4 "mitochondrial matrix PGP phosphatase involved in cardiolipin biosynthesis Gep4 (predicted)" [Schizosaccharomyces pombe (taxid:4896)]

 Score = 157 (60.3 bits), Expect = 6.2e-11, P = 6.2e-11
 Identities = 50/168 (29%), Positives = 76/168 (45%)

Query:   142 INVEGIVSSTVVFAKDRHLALPHVTVP-------DIRYIDWAELQRR-GFKGVVFDKDNT 193
             IN+EGI +        R + +PH T P       +I Y    + Q     + +V DKDN 
Sbjct:     3 INIEGIQAFCQTIRNPRRI-IPHATFPTFSQIPCNINYFLEQKFQVPVDIRALVLDKDNC 61

Query:   194 LTAPYSLTLWGPLSSSIEQCKSVFGH-DIAVFSNSAGLYEYDNDASKARKLEGKIGIKVI 252
             +T P   T+       I + ++++G  ++ + SNS G  + D     A   + K  I V+
Sbjct:    62 ITLPNETTIAEAELKKIREFQNIYGEKNVILLSNSIGTRKLDPTGELAAHFQQKWNIPVV 121

Query:   253 RHRVKKPAGTAEEIEKHFGCQS-----SQLIMVGDRPFTDIVYGNRNG 295
             RH   KP  T EE+  +    S     SQ++ +GDR  TDI   N  G
Sbjct:   122 RHSKLKPLCT-EELYTYLSNNSHVSSASQILFIGDRLLTDITLANIMG 168

GO:0005739 "mitochondrion" evidence=IDA

GO:0005743 "mitochondrial inner membrane" evidence=IEA

GO:0005759 "mitochondrial matrix" evidence=ISO

GO:0006655 "phosphatidylglycerol biosynthetic process" evidence=IC

GO:0007006 "mitochondrial membrane organization" evidence=IC

GO:0008962 "phosphatidylglycerophosphatase activity" evidence=ISO

GO:0032049 "cardiolipin biosynthetic process" evidence=ISO

TIGR_CMR|BA_4563 BA_4563 "hydrolase, HAD subfamily IIIA" [Bacillus anthracis str. Ames (taxid:198094)]

 Score = 154 (59.3 bits), Expect = 1.3e-10, P = 1.3e-10
 Identities = 49/174 (28%), Positives = 83/174 (47%)

Query:   160 LALPHVTVPDIRYIDWAELQRRGFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGH 219
             L LP+  V ++ ++   +L++RG KGV+ D DNTL           L     + K   G 
Sbjct:     3 LFLPNEYVKNVYHVQPEDLKKRGIKGVITDLDNTLIEWDRPNATPQLEEWFLKMKEQ-GI 61

Query:   220 DIAVFSNSAGLYEYDNDASKARKLEGKIGIKVIRHRVKKPAGTA-EEIEKHFGCQSSQLI 278
              + V SN        N+  + +     +GI  I H  +KP   A +   +    Q  +++
Sbjct:    62 QVTVVSN--------NNEQRVKDFADPLGIPFI-HSARKPFVRAFKRAIREMQLQPDEVV 112

Query:   279 MVGDRPFTDIVYGNRNGFLTILTEPLSLAEEPFIVRQVRKLEVTIVNRWFRRGL 332
             ++GD+  TD++ GNR G  TIL  P++  +   + R  RK+E  I+    ++GL
Sbjct:   113 VIGDQLLTDVLGGNRVGLHTILVVPVAQTDG-LVTRFNRKIERRIMRNMKKKGL 165

GO:0008152 "metabolic process" evidence=ISS

GO:0016787 "hydrolase activity" evidence=ISS

UNIPROTKB|G4N1T8 MGG_09486 "HAD superfamily phosphatase" [Magnaporthe oryzae 70-15 (taxid:242507)]

 Score = 151 (58.2 bits), Expect = 3.1e-09, P = 3.1e-09
 Identities = 50/167 (29%), Positives = 81/167 (48%)

Query:   174 DWAELQRRGFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVF-GHDIAVFSNSAGLYE 232
             D AE+     K V+ DKD+    P +  +  P        K+ + G  + + SN+AG   
Sbjct:    46 DGAEVD---IKAVILDKDDCFAYPETNVIHEPYKDRFAALKAAYPGRRLLIVSNTAGALS 102

Query:   233 YDNDASKARKLEGKIGIKVIRHRVKKPAGTAEEIEKHF------GCQS-SQLIMVGDRPF 285
             +D     A++LE   G+ V+ H+ KKP G   EI ++F      G  S SQ+ +VGDR  
Sbjct:   103 HDPKRKLAQELEEVTGVTVLSHKTKKP-GCGSEIMEYFRAHPDTGVTSPSQIAVVGDRLS 161

Query:   286 TDIVYGNRNGFLTI-LTEPLSLAEEPFIVRQVRKLEVTIVNRWFRRG 331
             TD++  N  G   + +TE ++  ++  I     +LE  ++    RRG
Sbjct:   162 TDMMLANMMGGWGVWVTEGVAPMQKKSIFS---RLEHRLMPFLLRRG 205

GO:0003674 "molecular_function" evidence=ISS

GO:0005739 "mitochondrion" evidence=ISS

TIGR_CMR|CHY_0622 CHY_0622 "hydrolase, HAD subfamily IIIA" [Carboxydothermus hydrogenoformans Z-2901 (taxid:246194)]

 Score = 127 (49.8 bits), Expect = 1.1e-06, P = 1.1e-06
 Identities = 42/174 (24%), Positives = 85/174 (48%)

Query:   163 PHVTVPDIRYIDWAELQRRGFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIA 222
             P + +  +  +D   L++   KG++ D DNT++     T+   +   +++ +  FG    
Sbjct:     7 PDLYLEKVTVLDEELLKKYNLKGIILDLDNTISPWGEKTIPRDVVKWVKKLQE-FGIKFC 65

Query:   223 VFSNSAGLYEYDNDASKARKLEGKIGIKVIRHRVKKPAGTA--EEIEKHFGCQSSQLIMV 280
             + SN        N   + R++   +GI  +   +K P   A  + +E   G + S++ ++
Sbjct:    66 LVSN--------NSNERVREVAVFLGIPYVARAIK-PRRRAFLQGVEL-MGLKPSEVAVI 115

Query:   281 GDRPFTDIVYGNRNGFLTILTEPLSLAEEPFIVRQVRK-LEVTIVNRWFRRGLK 333
             GD+  TDI+   R G + IL  P++  E  FI  ++ + +E  ++ R  ++GLK
Sbjct:   116 GDQLLTDIIGAKRAGLMAILVTPMASRE--FIGTKINRFIESYLLKRLLQKGLK 167


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.319   0.135   0.417    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      363       334   0.00091  116 3  11 22  0.39    34
                                                     33  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  6
  No. of states in DFA:  616 (65 KB)
  Total size of DFA:  259 KB (2138 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  29.56u 0.13s 29.69t   Elapsed:  00:00:01
  Total cpu time:  29.56u 0.13s 29.69t   Elapsed:  00:00:01
  Start:  Fri May 10 09:07:22 2013   End:  Fri May 10 09:07:23 2013

GO:0008152 "metabolic process" evidence=ISS

GO:0016787 "hydrolase activity" evidence=ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: GSVIVG00018919001 SubName- Full=Chromosome chr12 scaffold_18, whole genome shotgun sequence; (344 aa) (Vitis vinifera)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	363
TIGR01668	170	TIGR01668, YqeG_hyp_ppase, HAD superfamily (subfam	1e-64
pfam09419	166	pfam09419, PGP_phosphatase, Mitochondrial PGP phos	2e-54
TIGR01662	132	TIGR01662, HAD-SF-IIIA, HAD-superfamily hydrolase,	9e-26
COG2179	175	COG2179, COG2179, Predicted hydrolase of the HAD s	4e-17
cd01427	139	cd01427, HAD_like, Haloacid dehalogenase-like hydr	9e-06
pfam13242	74	pfam13242, Hydrolase_like, HAD-hyrolase-like	2e-05
COG0647	269	COG0647, NagD, Predicted sugar phosphatases of the	1e-04
PLN02645	311	PLN02645, PLN02645, phosphoglycolate phosphatase	1e-04
TIGR01452	279	TIGR01452, PGP_euk, phosphoglycolate/pyridoxal pho	4e-04

>gnl|CDD|233519 TIGR01668, YqeG_hyp_ppase, HAD superfamily (subfamily IIIA) phosphatase, TIGR01668

 Score =  202 bits (516), Expect = 1e-64
 Identities = 63/176 (35%), Positives = 90/176 (51%), Gaps = 9/176 (5%)

Query: 162 LPHVTVPDIRYIDWAELQRRGFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDI 221
           LPH  V  +  +    L++ G KGVV DKDNTL  P     +  L   IE+ K+  G  +
Sbjct: 4   LPHAIVKTLNDLTIDLLKKVGIKGVVLDKDNTLVYPDHNEAYPALRDWIEELKAA-GRKL 62

Query: 222 AVFSNSAGLYEYDNDASKARKLEGKIGIKVIRHRVKKPAGTAEEIEKHFGCQSSQLIMVG 281
            + SN+AG         +A+ +E  +GI V+ H VK P           G  S Q+ +VG
Sbjct: 63  LIVSNNAG-------EQRAKAVEKALGIPVLPHAVKPPGCAFRRAHPEMGLTSEQVAVVG 115

Query: 282 DRPFTDIVYGNRNGFLTILTEPLSLAEEPFIVRQVRKLEVTIVNRWFRRGLKPISH 337
           DR FTD++ GNRNG  TIL EPL   ++ FI R  R++E T++ ++      P   
Sbjct: 116 DRLFTDVMGGNRNGSYTILVEPLVHPDQWFIKRIWRRVERTVL-KFLVSRGGPAPE 170

This family of hypothetical proteins is a member of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterized members of this subfamily (TIGR01662) and most characterized members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs, all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family. Length = 170

>gnl|CDD|220230 pfam09419, PGP_phosphatase, Mitochondrial PGP phosphatase

 Score =  176 bits (448), Expect = 2e-54
 Identities = 63/169 (37%), Positives = 92/169 (54%), Gaps = 10/169 (5%)

Query: 144 VEGIVSSTVVFAKDRHLALPHVTVPDIRYIDWAELQRRGFKGVVFDKDNTLTAPYSLTLW 203
           +   ++   +  K+  L LPH+TVP  R +    L++ G K VV DKDN LT P+   +W
Sbjct: 1   LSATLNVLTLL-KNPSLCLPHLTVPTFRQLPIPILKKVGIKAVVLDKDNCLTLPHDDKIW 59

Query: 204 GPLSSSIEQCKSVFGHD-IAVFSNSAGLYEYDNDASKARKLEGKIGIKVIRHRVKKPAGT 262
            P     E+ +SV+    + + SNSAG  + D D  +A  LE   GI V+RH VKKP G 
Sbjct: 60  PPYQEKWERLRSVYPGKRLLIVSNSAGSSD-DPDGEQAEALEKSTGIPVLRHPVKKP-GC 117

Query: 263 AEEIEKHFGC-----QSSQLIMVGDRPFTDIVYGNRNG-FLTILTEPLS 305
            EEI ++F       + S++ +VGDR FTDI+  N  G +   LT+ + 
Sbjct: 118 GEEILEYFKERGVVTRPSEIAVVGDRLFTDILMANMMGSWGVWLTDGVG 166

This is a family of proteins that acts as a mitochondrial phosphatase in cardiolipin biosynthesis. Cardiolipin is a unique dimeric phosphoglycerolipid predominantly present in mitochondrial membranes. The inverted phosphatase motif includes the highly conserved DKD triad. Length = 166

>gnl|CDD|233517 TIGR01662, HAD-SF-IIIA, HAD-superfamily hydrolase, subfamily IIIA

 Score =  100 bits (250), Expect = 9e-26
 Identities = 32/132 (24%), Positives = 47/132 (35%), Gaps = 12/132 (9%)

Query: 184 KGVVFDKDNTLT------APYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDA 237
           KGVV D D TLT            +  P            G+ + + +N +G+      +
Sbjct: 1   KGVVLDLDGTLTDDVPYVDDEDERILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSS 60

Query: 238 SK----ARKLEGKIGIKVIRHRVKKP-AGTAEEIEKHF-GCQSSQLIMVGDRPFTDIVYG 291
            +      +L   I I       +KP  G   E  K F      + + VGD+  TD+   
Sbjct: 61  GRVARRLEELGVPIDILYACPHCRKPKPGMFLEALKRFNEIDPEESVYVGDQDLTDLQAA 120

Query: 292 NRNGFLTILTEP 303
            R G   IL  P
Sbjct: 121 KRAGLAFILVAP 132

This subfamily falls within the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The Class III subfamilies are characterized by the lack of any domains located between either between the first and second conserved catalytic motifs (as in the Class I subfamilies, TIGR01493, TIGR01509, TIGR01488 and TIGR01494) or between the second and third conserved catalytic motifs (as in the Class II subfamilies, TIGR01460 and TIGR01484) of the superfamily domain. The IIIA subfamily contains five major clades: histidinol-phosphatase (TIGR01261) and histidinol-phosphatase-related protein (TIGR00213) which together form a subfamily (TIGR01656), DNA 3'-phosphatase (TIGR01663, TIGR01664), YqeG (TIGR01668) and YrbI (TIGR01670). In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme [Unknown function, Enzymes of unknown specificity]. Length = 132

>gnl|CDD|225090 COG2179, COG2179, Predicted hydrolase of the HAD superfamily [General function prediction only]

 Score = 77.7 bits (192), Expect = 4e-17
 Identities = 54/167 (32%), Positives = 76/167 (45%), Gaps = 17/167 (10%)

Query: 173 IDWAELQRRGFKGVVFDKDNTLTA--PYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGL 230
           I    L+  G KGV+ D DNTL        T    L + + + K   G  + V SN    
Sbjct: 18  ITPDILKAHGIKGVILDLDNTLVPWDNPDATPE--LRAWLAELKEA-GIKVVVVSN---- 70

Query: 231 YEYDNDASKARKLEGKIGIKVIRHRVKKPAGTA-EEIEKHFGCQSSQLIMVGDRPFTDIV 289
               N  S+  +   K+G+  I +R KKP G A     K       +++MVGD+ FTD++
Sbjct: 71  ----NKESRVARAAEKLGVPFI-YRAKKPFGRAFRRALKEMNLPPEEVVMVGDQLFTDVL 125

Query: 290 YGNRNGFLTILTEPLSLAEEPFIVRQVRKLEVTIVNRWFRRGLKPIS 336
            GNR G  TIL EPL  A + +I +  R  E   V +   +   PI 
Sbjct: 126 GGNRAGMRTILVEPLV-APDGWITKINRWRER-RVLKKLGKKYGPIH 170

Length = 175

>gnl|CDD|119389 cd01427, HAD_like, Haloacid dehalogenase-like hydrolases

 Score = 44.7 bits (106), Expect = 9e-06
 Identities = 25/138 (18%), Positives = 42/138 (30%), Gaps = 24/138 (17%)

Query: 186 VVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVF------GHDIAVFSNSA----------- 228
           V+FD D TL                   K         G  +A+ +N +           
Sbjct: 2   VLFDLDGTLLDSEPGIAEIEELELYPGVKEALKELKEKGIKLALATNKSRREVLELLEEL 61

Query: 229 GLYEY-----DNDASKARKLEGKIGIKVIRHRVKKP-AGTAEEIEKHFGCQSSQLIMVGD 282
           GL +Y      ++ +     +  + +      + KP         K  G    +++MVGD
Sbjct: 62  GLDDYFDPVITSNGAAIYYPKEGLFLGGGPFDIGKPNPDKLLAALKLLGVDPEEVLMVGD 121

Query: 283 RPFTDIVYGNRNGFLTIL 300
               DI      G L + 
Sbjct: 122 SL-NDIEMAKAAGGLGVA 138

The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases. Length = 139

>gnl|CDD|222003 pfam13242, Hydrolase_like, HAD-hyrolase-like

 Score = 41.9 bits (99), Expect = 2e-05
 Identities = 19/72 (26%), Positives = 27/72 (37%), Gaps = 11/72 (15%)

Query: 258 KP-AGTAEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGFLTIL-----TEPLSLAEEP- 310
           KP  G      +  G    + +M+GD   TDI+     G  TIL     T    L   P 
Sbjct: 4   KPNPGMLRAALERLGVDPEECVMIGDSD-TDILAARAAGIRTILVLTGVTTAEDLERAPG 62

Query: 311 ---FIVRQVRKL 319
              ++V  +  L
Sbjct: 63  RPDYVVDSLADL 74

Length = 74

>gnl|CDD|223720 COG0647, NagD, Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]

 Score = 43.0 bits (102), Expect = 1e-04
 Identities = 16/44 (36%), Positives = 22/44 (50%), Gaps = 1/44 (2%)

Query: 258 KP-AGTAEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGFLTIL 300
           KP     E   +  G   S+++MVGDR  TDI+     G  T+L
Sbjct: 190 KPSPAIYEAALEKLGLDRSEVLMVGDRLDTDILGAKAAGLDTLL 233

Length = 269

>gnl|CDD|178251 PLN02645, PLN02645, phosphoglycolate phosphatase

 Score = 43.2 bits (102), Expect = 1e-04
 Identities = 19/46 (41%), Positives = 27/46 (58%), Gaps = 1/46 (2%)

Query: 256 VKKPAG-TAEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGFLTIL 300
           V KP+    + +   FG + SQ+ MVGDR  TDI++G   G  T+L
Sbjct: 228 VGKPSTFMMDYLANKFGIEKSQICMVGDRLDTDILFGQNGGCKTLL 273

Length = 311

>gnl|CDD|233420 TIGR01452, PGP_euk, phosphoglycolate/pyridoxal phosphate phosphatase family

 Score = 41.4 bits (97), Expect = 4e-04
 Identities = 19/47 (40%), Positives = 29/47 (61%), Gaps = 1/47 (2%)

Query: 256 VKKPAGTA-EEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGFLTILT 301
           V KP+    E I ++F    ++ +MVGDR  TDI++G+R G  T+L 
Sbjct: 200 VGKPSPYMFECITENFSIDPARTLMVGDRLETDILFGHRCGMTTVLV 246

PGP is an essential enzyme in the glycolate salvage pathway in higher organisms (photorespiration in plants). Phosphoglycolate results from the oxidase activity of RubisCO in the Calvin cycle when concentrations of carbon dioxide are low relative to oxygen. In mammals, PGP is found in many tissues, notably in red blood cells where P-glycolate is and important activator of the hydrolysis of 2,3-bisphosphoglycerate, a major modifier of the oxygen affinity of hemoglobin. Pyridoxal phosphate (PLP, Vitamin B6) phosphatase is involved in the degradation of PLP in mammals and is widely distributed in human tissues including erythrocyes. The enzymes described here are members of the Haloacid dehalogenase superfamily of hydrolase enzymes (pfam00702). Unlike the bacterial PGP equivalog (TIGR01449), which is a member of class (subfamily) I, these enzymes are members of class (subfamily) II. These two families have almost certainly arisen from convergent evolution (although these two ancestors may themselves have diverged from a more distant HAD superfamily progenitor). The primary seed sequence for this model comes from Chlamydomonas reinhardtii, a photosynthetic alga. The enzyme has been purified and characterized and these data are fully consistent with the assignment of function as a PGPase involved in photorespiration. The second seed, from Homo sapiens chromosome 22 has been characterized as a pyridoxal phosphatase. Biochemical characterization of partially purified PGP's from various tissues including red blood cells have been performed while one gene for PGP has been localized to chromosome 16p13.3. The sequence used here maps to chromosome 22. There is indeed a related gene on chromosome 16 (and it is expressed, since EST's are found) which shows 46% identity and 59% positives by BLAST2 (E=1e-66). The chromosome 16 gene is not in evidence in nraa but translated from the genomic sequence would score 372.4 (E=7.9e-113) versus This model, well above trusted. The third seed, from C. elegans, is only supported by sequence similarity. This model is limited to eukaryotic species including S. pombe and S. cerevisiae, although several archaea score between the trusted and noise cutoffs. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase d. Length = 279

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	363
COG2179	175	Predicted hydrolase of the HAD superfamily [Genera	100.0
PF09419	168	PGP_phosphatase: Mitochondrial PGP phosphatase; In	100.0
KOG2961	190	consensus Predicted hydrolase (HAD superfamily) [G	99.98
TIGR01668	170	YqeG_hyp_ppase HAD superfamily (subfamily IIIA) ph	99.94
KOG2882	306	consensus p-Nitrophenyl phosphatase [Inorganic ion	99.78
PRK06769	173	hypothetical protein; Validated	99.75
TIGR01662	132	HAD-SF-IIIA HAD-superfamily hydrolase, subfamily I	99.75
TIGR01656	147	Histidinol-ppas histidinol-phosphate phosphatase f	99.69
TIGR00213	176	GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase	99.66
TIGR01664	166	DNA-3'-Pase DNA 3'-phosphatase. The central phosph	99.62
PRK08942	181	D,D-heptose 1,7-bisphosphate phosphatase; Validate	99.61
COG0647	269	NagD Predicted sugar phosphatases of the HAD super	99.59
TIGR01261	161	hisB_Nterm histidinol-phosphatase. This model desc	99.58
COG0241	181	HisB Histidinol phosphatase and related phosphatas	99.53
TIGR01452	279	PGP_euk phosphoglycolate/pyridoxal phosphate phosp	99.52
PRK05446	354	imidazole glycerol-phosphate dehydratase/histidino	99.48
TIGR01428	198	HAD_type_II 2-haloalkanoic acid dehalogenase, type	99.47
PLN02575	381	haloacid dehalogenase-like hydrolase	99.44
COG1011	229	Predicted hydrolase (HAD superfamily) [General fun	99.42
TIGR02253	221	CTE7 HAD superfamily (subfamily IA) hydrolase, TIG	99.41
PLN02645	311	phosphoglycolate phosphatase	99.41
KOG3085	237	consensus Predicted hydrolase (HAD superfamily) [G	99.41
TIGR01685	174	MDP-1 magnesium-dependent phosphatase-1. This mode	99.4
TIGR02252	203	DREG-2 REG-2-like, HAD superfamily (subfamily IA)	99.39
TIGR01457	249	HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydr	99.39
PTZ00445	219	p36-lilke protein; Provisional	99.38
cd01427	139	HAD_like Haloacid dehalogenase-like hydrolases. Th	99.38
PF13419	176	HAD_2: Haloacid dehalogenase-like hydrolase; PDB:	99.37
TIGR01670	154	YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-pho	99.37
PRK09484	183	3-deoxy-D-manno-octulosonate 8-phosphate phosphata	99.36
PLN02770	248	haloacid dehalogenase-like hydrolase family protei	99.35
PLN02940	382	riboflavin kinase	99.35
PRK11587	218	putative phosphatase; Provisional	99.34
PRK10826	222	2-deoxyglucose-6-phosphatase; Provisional	99.34
TIGR01422	253	phosphonatase phosphonoacetaldehyde hydrolase. Thi	99.33
TIGR01454	205	AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthes	99.33
COG0546	220	Gph Predicted phosphatases [General function predi	99.32
TIGR01449	213	PGP_bact 2-phosphoglycolate phosphatase, prokaryot	99.31
TIGR03351	220	PhnX-like phosphonatase-like hydrolase. This clade	99.31
PLN03243	260	haloacid dehalogenase-like hydrolase; Provisional	99.31
PRK09449	224	dUMP phosphatase; Provisional	99.31
TIGR01509	183	HAD-SF-IA-v3 haloacid dehalogenase superfamily, su	99.31
PRK10444	248	UMP phosphatase; Provisional	99.3
PRK13288	214	pyrophosphatase PpaX; Provisional	99.3
COG0637	221	Predicted phosphatase/phosphohexomutase [General f	99.3
TIGR01990	185	bPGM beta-phosphoglucomutase. The enzyme from L. l	99.3
PRK13226	229	phosphoglycolate phosphatase; Provisional	99.29
PRK09456	199	?-D-glucose-1-phosphatase; Provisional	99.28
TIGR01681	128	HAD-SF-IIIC HAD-superfamily phosphatase, subfamily	99.27
TIGR02254	224	YjjG/YfnB HAD superfamily (subfamily IA) hydrolase	99.27
PRK10748	238	flavin mononucleotide phosphatase; Provisional	99.26
PF08645	159	PNK3P: Polynucleotide kinase 3 phosphatase; InterP	99.25
TIGR01458	257	HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydr	99.25
PHA02530	300	pseT polynucleotide kinase; Provisional	99.24
PRK14988	224	GMP/IMP nucleotidase; Provisional	99.24
TIGR02009	185	PGMB-YQAB-SF beta-phosphoglucomutase family hydrol	99.24
PRK13478	267	phosphonoacetaldehyde hydrolase; Provisional	99.23
TIGR02247	211	HAD-1A3-hyp Epoxide hydrolase N-terminal domain-li	99.23
TIGR02726	169	phenyl_P_delta phenylphosphate carboxylase, delta	99.22
PF13242	75	Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OY	99.2
PLN02779	286	haloacid dehalogenase-like hydrolase family protei	99.2
TIGR01686	320	FkbH FkbH-like domain. The C-terminal portion of t	99.19
TIGR00338	219	serB phosphoserine phosphatase SerB. Phosphoserine	99.19
TIGR01993	184	Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These	99.17
TIGR01691	220	enolase-ppase 2,3-diketo-5-methylthio-1-phosphopen	99.16
PRK13222	226	phosphoglycolate phosphatase; Provisional	99.14
PLN02811	220	hydrolase	99.14
PRK13223	272	phosphoglycolate phosphatase; Provisional	99.14
PRK10563	221	6-phosphogluconate phosphatase; Provisional	99.13
TIGR01663	526	PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase	99.13
PRK10725	188	fructose-1-P/6-phosphogluconate phosphatase; Provi	99.11
TIGR01460	236	HAD-SF-IIA Haloacid Dehalogenase Superfamily Class	99.09
smart00577	148	CPDc catalytic domain of ctd-like phosphatases.	99.09
PRK13225	273	phosphoglycolate phosphatase; Provisional	99.08
KOG3040	262	consensus Predicted sugar phosphatase (HAD superfa	99.02
TIGR01459	242	HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolas	99.01
TIGR01672	237	AphA HAD superfamily (subfamily IIIB) phosphatase,	99.0
TIGR01456	321	CECR5 HAD-superfamily class IIA hydrolase, TIGR014	98.97
PRK11009	237	aphA acid phosphatase/phosphotransferase; Provisio	98.97
PLN02919	1057	haloacid dehalogenase-like hydrolase family protei	98.95
PLN02954	224	phosphoserine phosphatase	98.93
TIGR01548	197	HAD-SF-IA-hyp1 haloacid dehalogenase superfamily,	98.89
PHA02597	197	30.2 hypothetical protein; Provisional	98.89
TIGR01549	154	HAD-SF-IA-v1 haloacid dehalogenase superfamily, su	98.88
PRK06698	459	bifunctional 5'-methylthioadenosine/S-adenosylhomo	98.86
PF00702	215	Hydrolase: haloacid dehalogenase-like hydrolase; I	98.86
PRK11133	322	serB phosphoserine phosphatase; Provisional	98.85
TIGR02244	343	HAD-IG-Ncltidse HAD superfamily (subfamily IG) hyd	98.85
PRK13582	205	thrH phosphoserine phosphatase; Provisional	98.84
TIGR01491	201	HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPa	98.8
COG1778	170	Low specificity phosphatase (HAD superfamily) [Gen	98.69
TIGR01493	175	HAD-SF-IA-v2 Haloacid dehalogenase superfamily, su	98.66
PRK09552	219	mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosp	98.53
TIGR02251	162	HIF-SF_euk Dullard-like phosphatase domain. This d	98.51
TIGR01459	242	HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolas	98.49
PLN02645	311	phosphoglycolate phosphatase	98.37
PF12689	169	Acid_PPase: Acid Phosphatase; InterPro: IPR010036	98.34
PRK08238	479	hypothetical protein; Validated	98.33
TIGR01525	556	ATPase-IB_hvy heavy metal translocating P-type ATP	98.3
TIGR01490	202	HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrol	98.23
TIGR01511	562	ATPase-IB1_Cu copper-(or silver)-translocating P-t	98.21
TIGR01487	215	SPP-like sucrose-phosphate phosphatase-like hydrol	98.19
KOG2914	222	consensus Predicted haloacid-halidohydrolase and r	98.18
PRK01158	230	phosphoglycolate phosphatase; Provisional	98.14
TIGR03333	214	salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl	98.13
TIGR01512	536	ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translo	98.08
TIGR01452	279	PGP_euk phosphoglycolate/pyridoxal phosphate phosp	98.08
TIGR01533	266	lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) famil	98.06
TIGR01489	188	DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopent	98.01
PF13344	101	Hydrolase_6: Haloacid dehalogenase-like hydrolase;	98.0
PRK10671	834	copA copper exporting ATPase; Provisional	97.96
COG0560	212	SerB Phosphoserine phosphatase [Amino acid transpo	97.93
KOG3109	244	consensus Haloacid dehalogenase-like hydrolase [Ge	97.93
TIGR01482	225	SPP-subfamily Sucrose-phosphate phosphatase subfam	97.89
TIGR01544	277	HAD-SF-IE haloacid dehalogenase superfamily, subfa	97.84
TIGR01488	177	HAD-SF-IB Haloacid Dehalogenase superfamily, subfa	97.77
TIGR02137	203	HSK-PSP phosphoserine phosphatase/homoserine phosp	97.75
PRK11033	741	zntA zinc/cadmium/mercury/lead-transporting ATPase	97.6
TIGR01457	249	HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydr	97.59
TIGR01684	301	viral_ppase viral phosphatase. These proteins also	97.55
TIGR01458	257	HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydr	97.54
COG0647	269	NagD Predicted sugar phosphatases of the HAD super	97.51
TIGR00685	244	T6PP trehalose-phosphatase. At least 18 distinct s	97.45
PRK10444	248	UMP phosphatase; Provisional	97.45
KOG1615	227	consensus Phosphoserine phosphatase [Amino acid tr	97.4
TIGR01460	236	HAD-SF-IIA Haloacid Dehalogenase Superfamily Class	97.32
TIGR01485	249	SPP_plant-cyano sucrose-6F-phosphate phosphohydrol	97.31
PF05761	448	5_nucleotid: 5' nucleotidase family; InterPro: IPR	97.29
TIGR01522	884	ATPase-IIA2_Ca golgi membrane calcium-translocatin	97.27
PHA03398	303	viral phosphatase superfamily protein; Provisional	97.25
PRK10187	266	trehalose-6-phosphate phosphatase; Provisional	97.21
COG4996	164	Predicted phosphatase [General function prediction	97.11
TIGR01675	229	plant-AP plant acid phosphatase. This model explic	97.07
TIGR02250	156	FCP1_euk FCP1-like phosphatase, phosphatase domain	97.02
TIGR01456	321	CECR5 HAD-superfamily class IIA hydrolase, TIGR014	97.01
PRK00192	273	mannosyl-3-phosphoglycerate phosphatase; Reviewed	96.98
COG4229	229	Predicted enolase-phosphatase [Energy production a	96.93
smart00775	157	LNS2 LNS2 domain. This domain is found in Saccharo	96.89
PF03767	229	Acid_phosphat_B: HAD superfamily, subfamily IIIB (	96.78
PRK10530	272	pyridoxal phosphate (PLP) phosphatase; Provisional	96.77
TIGR01689	126	EcbF-BcbF capsule biosynthesis phosphatase. Due to	96.76
TIGR01497	675	kdpB K+-transporting ATPase, B subunit. One sequen	96.72
PF12710	192	HAD: haloacid dehalogenase-like hydrolase; PDB: 3P	96.71
PRK10513	270	sugar phosphate phosphatase; Provisional	96.68
PRK15126	272	thiamin pyrimidine pyrophosphate hydrolase; Provis	96.67
PRK10976	266	putative hydrolase; Provisional	96.61
COG0561	264	Cof Predicted hydrolases of the HAD superfamily [G	96.61
KOG2134	422	consensus Polynucleotide kinase 3' phosphatase [Re	96.58
TIGR02463	221	MPGP_rel mannosyl-3-phosphoglycerate phosphatase-r	96.55
TIGR01484	204	HAD-SF-IIB HAD-superfamily hydrolase, subfamily II	96.55
PRK03669	271	mannosyl-3-phosphoglycerate phosphatase; Reviewed	96.48
COG4087	152	Soluble P-type ATPase [General function prediction	96.4
PRK12702	302	mannosyl-3-phosphoglycerate phosphatase; Reviewed	96.39
COG2217	713	ZntA Cation transport ATPase [Inorganic ion transp	96.38
TIGR01680	275	Veg_Stor_Prot vegetative storage protein. The prot	96.33
PF08282	254	Hydrolase_3: haloacid dehalogenase-like hydrolase;	96.29
PRK01122	679	potassium-transporting ATPase subunit B; Provision	96.28
TIGR00099	256	Cof-subfamily Cof subfamily of IIB subfamily of ha	96.24
TIGR02461	225	osmo_MPG_phos mannosyl-3-phosphoglycerate phosphat	96.2
PRK14010	673	potassium-transporting ATPase subunit B; Provision	96.18
PRK10530	272	pyridoxal phosphate (PLP) phosphatase; Provisional	96.15
PF03031	159	NIF: NLI interacting factor-like phosphatase; Inte	96.14
KOG2882	306	consensus p-Nitrophenyl phosphatase [Inorganic ion	96.0
PLN02887	580	hydrolase family protein	95.83
PTZ00174	247	phosphomannomutase; Provisional	95.78
PRK11590	211	hypothetical protein; Provisional	95.65
COG2503	274	Predicted secreted acid phosphatase [General funct	95.5
TIGR01116	917	ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium	95.49
PF06888	234	Put_Phosphatase: Putative Phosphatase; InterPro: I	95.47
KOG0207	951	consensus Cation transport ATPase [Inorganic ion t	95.4
TIGR01524	867	ATPase-IIIB_Mg magnesium-translocating P-type ATPa	95.28
TIGR01486	256	HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosph	95.17
TIGR01647	755	ATPase-IIIA_H plasma-membrane proton-efflux P-type	95.09
KOG1618	389	consensus Predicted phosphatase [General function	94.84
COG3700	237	AphA Acid phosphatase (class B) [General function	94.73
PRK10517	902	magnesium-transporting ATPase MgtA; Provisional	94.68
TIGR01517	941	ATPase-IIB_Ca plasma-membrane calcium-translocatin	94.32
PRK15122	903	magnesium-transporting ATPase; Provisional	94.31
TIGR01545	210	YfhB_g-proteo haloacid dehalogenase superfamily, s	94.14
TIGR01494	499	ATPase_P-type ATPase, P-type (transporting), HAD s	93.78
PF08235	157	LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209	93.75
PRK14502	694	bifunctional mannosyl-3-phosphoglycerate synthase/	93.53
COG3882	574	FkbH Predicted enzyme involved in methoxymalonyl-A	93.11
TIGR02463	221	MPGP_rel mannosyl-3-phosphoglycerate phosphatase-r	92.93
COG3769	274	Predicted hydrolase (HAD superfamily) [General fun	92.79
PRK14501	726	putative bifunctional trehalose-6-phosphate syntha	92.02
TIGR01484	204	HAD-SF-IIB HAD-superfamily hydrolase, subfamily II	91.65
COG4359	220	Uncharacterized conserved protein [Function unknow	91.21
PRK00192	273	mannosyl-3-phosphoglycerate phosphatase; Reviewed	91.04
TIGR02471	236	sucr_syn_bact_C sucrose phosphate synthase, sucros	90.84
PLN03017	366	trehalose-phosphatase	90.76
PLN02151	354	trehalose-phosphatase	90.57
KOG2630	254	consensus Enolase-phosphatase E-1 [Amino acid tran	90.57
TIGR02245	195	HAD_IIID1 HAD-superfamily subfamily IIID hydrolase	90.43
PLN02580	384	trehalose-phosphatase	89.77
PLN02423	245	phosphomannomutase	89.69
TIGR00099	256	Cof-subfamily Cof subfamily of IIB subfamily of ha	89.24
PLN03063	797	alpha,alpha-trehalose-phosphate synthase (UDP-form	89.14
KOG3120	256	consensus Predicted haloacid dehalogenase-like hyd	89.12
KOG2469	424	consensus IMP-GMP specific 5'-nucleotidase [Nucleo	88.93
PLN02205	854	alpha,alpha-trehalose-phosphate synthase [UDP-form	88.8
PF05152	297	DUF705: Protein of unknown function (DUF705); Inte	88.34
TIGR01523	1053	ATPase-IID_K-Na potassium and/or sodium efflux P-t	87.99
COG5610	635	Predicted hydrolase (HAD superfamily) [General fun	87.81
PLN03064	934	alpha,alpha-trehalose-phosphate synthase (UDP-form	87.26
COG1877	266	OtsB Trehalose-6-phosphatase [Carbohydrate transpo	86.69
TIGR02471	236	sucr_syn_bact_C sucrose phosphate synthase, sucros	86.09
PF08282	254	Hydrolase_3: haloacid dehalogenase-like hydrolase;	86.08
PRK10513	270	sugar phosphate phosphatase; Provisional	85.37
PRK10976	266	putative hydrolase; Provisional	85.27
KOG2470	510	consensus Similar to IMP-GMP specific 5'-nucleotid	84.64
KOG4549	144	consensus Magnesium-dependent phosphatase [General	84.16
KOG1618	389	consensus Predicted phosphatase [General function	83.64
TIGR01486	256	HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosph	83.01
PF05116	247	S6PP: Sucrose-6F-phosphate phosphohydrolase; Inter	81.52
TIGR01106	997	ATPase-IIC_X-K sodium or proton efflux -- potassiu	81.26
PF02358	235	Trehalose_PPase: Trehalose-phosphatase; InterPro:	81.1

>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]

Probab=100.00  E-value=2.3e-37  Score=276.05  Aligned_cols=168  Identities=30%  Similarity=0.401  Sum_probs=156.3

Q ss_pred             CCCCCCcccCCccCCChHHHHHcCCCEEEEcCCceeecCCCCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHH
Q 017982          159 HLALPHVTVPDIRYIDWAELQRRGFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDAS  238 (363)
Q Consensus       159 ~L~~P~~~v~sI~~Id~~~L~~~GIkaVV~DlDnTL~~~~~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~  238 (363)
                      .++.|+.++.++++|+++.|+++|++++++|+||||..|...+..|++++|+..++ ..|++++|+||+.        +.
T Consensus         4 k~~~Pd~~v~tv~~i~~~~L~~~Gikgvi~DlDNTLv~wd~~~~tpe~~~W~~e~k-~~gi~v~vvSNn~--------e~   74 (175)
T COG2179           4 KFLQPDKLVETVFDITPDILKAHGIKGVILDLDNTLVPWDNPDATPELRAWLAELK-EAGIKVVVVSNNK--------ES   74 (175)
T ss_pred             hhhChhHHHhhHhhCCHHHHHHcCCcEEEEeccCceecccCCCCCHHHHHHHHHHH-hcCCEEEEEeCCC--------HH
Confidence            35789999999999999999999999999999999999999999999999999999 6899999999986        68


Q ss_pred             HHHHHHHHhCCeEEEcccCCCch-hHHHHHHHhCCCCCcEEEEccCCcccHHHHHHcCCeEEEEcCCCCCCchhHHHHHH
Q 017982          239 KARKLEGKIGIKVIRHRVKKPAG-TAEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGFLTILTEPLSLAEEPFIVRQVR  317 (363)
Q Consensus       239 ~a~~i~~~LGi~~I~~~~kKP~p-~~~~alk~lgl~pee~vmVGDrL~TDI~~A~raGi~TIlV~p~~~~~e~~~t~~~R  317 (363)
                      ++..+++.+|+++|+ .++||.+ .|++|++.|++++++|+|||||++|||.+||++||+||+|.|...+ +.|.|+++|
T Consensus        75 RV~~~~~~l~v~fi~-~A~KP~~~~fr~Al~~m~l~~~~vvmVGDqL~TDVlggnr~G~~tIlV~Pl~~~-d~~~t~~nR  152 (175)
T COG2179          75 RVARAAEKLGVPFIY-RAKKPFGRAFRRALKEMNLPPEEVVMVGDQLFTDVLGGNRAGMRTILVEPLVAP-DGWITKINR  152 (175)
T ss_pred             HHHhhhhhcCCceee-cccCccHHHHHHHHHHcCCChhHEEEEcchhhhhhhcccccCcEEEEEEEeccc-cchhhhhhH
Confidence            999999999999995 6789998 7899999999999999999999999999999999999999999977 779999999


Q ss_pred             HHHHHHHHHHHhc-CCCCCCC
Q 017982          318 KLEVTIVNRWFRR-GLKPISH  337 (363)
Q Consensus       318 ~lE~~vl~~~~~~-g~~~~~~  337 (363)
                      ++|+++++.+..+ |..-|+.
T Consensus       153 ~~Er~v~~~l~~k~g~i~~k~  173 (175)
T COG2179         153 WRERRVLKKLGKKYGPIHWKE  173 (175)
T ss_pred             HHHHHHHHHHHHhcCCccccc
Confidence            9999999888776 7665543

>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases

Probab=100.00  E-value=2.9e-34  Score=258.50  Aligned_cols=158  Identities=41%  Similarity=0.661  Sum_probs=142.4

Q ss_pred             ccchhhhhhhhcCCCCCCCCcccCCccCCChHH--HHHcCCCEEEEcCCceeecCCCCCcchhHHHHHHHHHHhCCC-eE
Q 017982          145 EGIVSSTVVFAKDRHLALPHVTVPDIRYIDWAE--LQRRGFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGH-DI  221 (363)
Q Consensus       145 ~Gi~~~~~~l~~~P~L~~P~~~v~sI~~Id~~~--L~~~GIkaVV~DlDnTL~~~~~~~~~p~v~e~L~~Lk~~~Gi-kl  221 (363)
                      +|+.+... ++++|+|+.|++++++|++||++.  |++.||+++++|+||||+.|+..+++|++.+||++|++.+|. ++
T Consensus         2 ~a~~~~~~-~~~~p~l~~P~l~V~si~~I~~~~~~Lk~~Gik~li~DkDNTL~~~~~~~i~~~~~~~~~~l~~~~~~~~v   80 (168)
T PF09419_consen    2 SATLAVFR-LLRNPSLLLPHLYVPSIRDIDFEANHLKKKGIKALIFDKDNTLTPPYEDEIPPEYAEWLNELKKQFGKDRV   80 (168)
T ss_pred             chhHHHHH-HHcCccccCCCEEcCChhhCCcchhhhhhcCceEEEEcCCCCCCCCCcCcCCHHHHHHHHHHHHHCCCCeE
Confidence            35566666 678999999999999999999999  999999999999999999999999999999999999966554 69


Q ss_pred             EEEeCCCCCCCCCccHHHHHHHHHHhCCeEEEcccCCCchhHHHHHHHhCC-----CCCcEEEEccCCcccHHHHHHcCC
Q 017982          222 AVFSNSAGLYEYDNDASKARKLEGKIGIKVIRHRVKKPAGTAEEIEKHFGC-----QSSQLIMVGDRPFTDIVYGNRNGF  296 (363)
Q Consensus       222 ~IVSN~~g~~~~dp~~~~a~~i~~~LGi~~I~~~~kKP~p~~~~alk~lgl-----~pee~vmVGDrL~TDI~~A~raGi  296 (363)
                      +||||+.|+.+ |+.+.+++.+++.+|++++.|..+||. .+.++++.++.     .|+|++|||||++|||.+||++|+
T Consensus        81 ~IvSNsaGs~~-d~~~~~a~~~~~~lgIpvl~h~~kKP~-~~~~i~~~~~~~~~~~~p~eiavIGDrl~TDVl~gN~~G~  158 (168)
T PF09419_consen   81 LIVSNSAGSSD-DPDGERAEALEKALGIPVLRHRAKKPG-CFREILKYFKCQKVVTSPSEIAVIGDRLFTDVLMGNRMGS  158 (168)
T ss_pred             EEEECCCCccc-CccHHHHHHHHHhhCCcEEEeCCCCCc-cHHHHHHHHhhccCCCCchhEEEEcchHHHHHHHhhccCc
Confidence            99999998876 777899999999999999888899994 35677777764     499999999999999999999999


Q ss_pred             eEEEEcCCC
Q 017982          297 LTILTEPLS  305 (363)
Q Consensus       297 ~TIlV~p~~  305 (363)
                      +||||..++
T Consensus       159 ~tilv~~gv  167 (168)
T PF09419_consen  159 YTILVTDGV  167 (168)
T ss_pred             eEEEEecCc
Confidence            999998765

All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.

>KOG2961 consensus Predicted hydrolase (HAD superfamily) [General function prediction only]

Probab=99.98  E-value=1.2e-31  Score=236.50  Aligned_cols=184  Identities=66%  Similarity=1.044  Sum_probs=169.7

Q ss_pred             cccccccchhhhhhhhcCCCCCCCCcccCCccCCChHHHHHcCCCEEEEcCCceeecCCCCCcchhHHHHHHHHHHhCC-
Q 017982          140 QRINVEGIVSSTVVFAKDRHLALPHVTVPDIRYIDWAELQRRGFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFG-  218 (363)
Q Consensus       140 q~ln~~Gi~~~~~~l~~~P~L~~P~~~v~sI~~Id~~~L~~~GIkaVV~DlDnTL~~~~~~~~~p~v~e~L~~Lk~~~G-  218 (363)
                      |++|++||....++ +++|++..||..++++.+|+++-++..|||+||+|+|||++.+++...+|.....+++|+..+| 
T Consensus         1 ~~iNIeGi~~~~~~-v~npr~~~Ph~~vptf~~ip~~I~~~~~ikavVlDKDNcit~P~~~~Iwp~~l~~ie~~~~vyge   79 (190)
T KOG2961|consen    1 QRINIEGIVSSVSV-VVNPRFVLPHVSVPTFRYIPWEILKRKGIKAVVLDKDNCITAPYSLAIWPPLLPSIERCKAVYGE   79 (190)
T ss_pred             CceehHHhhhhhee-eeCcceeccccccCccccCCcchhhccCceEEEEcCCCeeeCCcccccCchhHHHHHHHHHHhCc
Confidence            56899999999985 6789999999999999999999999999999999999999999999999999999999998888 


Q ss_pred             CeEEEEeCCCCCCCCCccHHHHHHHHHHhCCeEEEcccCCCchhHHHHHHHhC----CCCCcEEEEccCCcccHHHHHHc
Q 017982          219 HDIAVFSNSAGLYEYDNDASKARKLEGKIGIKVIRHRVKKPAGTAEEIEKHFG----CQSSQLIMVGDRPFTDIVYGNRN  294 (363)
Q Consensus       219 ikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~~I~~~~kKP~p~~~~alk~lg----l~pee~vmVGDrL~TDI~~A~ra  294 (363)
                      ..++|+||+.|+..+|++++.++.+++..||+++.|..+||...-+..-..+|    ..++|++|||||++|||..||++
T Consensus        80 k~i~v~SNsaG~~~~D~d~s~Ak~le~k~gIpVlRHs~kKP~ct~E~~~y~~~Nshv~~~se~~~vGDRlfTDI~~aN~m  159 (190)
T KOG2961|consen   80 KDIAVFSNSAGLTEYDHDDSKAKALEAKIGIPVLRHSVKKPACTAEEVEYHFGNSHVCTSSELIMVGDRLFTDIVYANRM  159 (190)
T ss_pred             ccEEEEecCcCccccCCchHHHHHHHHhhCCceEeecccCCCccHHHHHHHhCCcccCChhHeEEEccchhhhHhhhhhc
Confidence            57999999999988999999999999999999999999999985555555667    78999999999999999999999


Q ss_pred             CCeEEEEcCCCCCCchhHHHHHHHHHHHHH
Q 017982          295 GFLTILTEPLSLAEEPFIVRQVRKLEVTIV  324 (363)
Q Consensus       295 Gi~TIlV~p~~~~~e~~~t~~~R~lE~~vl  324 (363)
                      |..++|+.+++..++.+..+..|++|..++
T Consensus       160 Gs~gVw~~~gv~~~~n~i~~~~~~l~~~l~  189 (190)
T KOG2961|consen  160 GSLGVWTEPGVRAEENFIVRQVRRLELALL  189 (190)
T ss_pred             cceeEEecccccccchHHHHHHHHHHHHhh
Confidence            999999999999999998888888886543

>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668

Probab=99.94  E-value=4.2e-26  Score=204.27  Aligned_cols=166  Identities=38%  Similarity=0.568  Sum_probs=147.7

Q ss_pred             CCCCCcccCCccCCChHHHHHcCCCEEEEcCCceeecCCCCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHH
Q 017982          160 LALPHVTVPDIRYIDWAELQRRGFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASK  239 (363)
Q Consensus       160 L~~P~~~v~sI~~Id~~~L~~~GIkaVV~DlDnTL~~~~~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~  239 (363)
                      ++.|+++++++.+|+++.|++.|++++++|+|+||+.+....++|++.++|++|+ +.|++++|+||+..       ...
T Consensus         2 ~~~~~~~~~~~~~i~~~~~~~~~v~~vv~D~Dgtl~~~~~~~~~pgv~e~L~~Lk-~~g~~l~I~Sn~~~-------~~~   73 (170)
T TIGR01668         2 FCLPHAIVKTLNDLTIDLLKKVGIKGVVLDKDNTLVYPDHNEAYPALRDWIEELK-AAGRKLLIVSNNAG-------EQR   73 (170)
T ss_pred             CcCcccccCchhhCCHHHHHHCCCCEEEEecCCccccCCCCCcChhHHHHHHHHH-HcCCEEEEEeCCch-------HHH
Confidence            6899999999999999999999999999999999998877789999999999998 67999999999962       356


Q ss_pred             HHHHHHHhCCeEEEcccCCCch-hHHHHHHHhCCCCCcEEEEccCCcccHHHHHHcCCeEEEEcCCCCCCchhHHHHHHH
Q 017982          240 ARKLEGKIGIKVIRHRVKKPAG-TAEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGFLTILTEPLSLAEEPFIVRQVRK  318 (363)
Q Consensus       240 a~~i~~~LGi~~I~~~~kKP~p-~~~~alk~lgl~pee~vmVGDrL~TDI~~A~raGi~TIlV~p~~~~~e~~~t~~~R~  318 (363)
                      +..+.+.+|+.++. ...||.+ .+..+++++|+++++++||||++.+||.+|+++|+.+|||.++....+.+.+.+.|+
T Consensus        74 ~~~~~~~~gl~~~~-~~~KP~p~~~~~~l~~~~~~~~~~l~IGDs~~~Di~aA~~aGi~~i~v~~g~~~~~~~~~~~~~~  152 (170)
T TIGR01668        74 AKAVEKALGIPVLP-HAVKPPGCAFRRAHPEMGLTSEQVAVVGDRLFTDVMGGNRNGSYTILVEPLVHPDQWFIKRIWRR  152 (170)
T ss_pred             HHHHHHHcCCEEEc-CCCCCChHHHHHHHHHcCCCHHHEEEECCcchHHHHHHHHcCCeEEEEccCcCCccccchhhHHH
Confidence            77777889988664 3569998 578999999999999999999998899999999999999999888888899999999


Q ss_pred             HHHHHHHHHHhcCCCC
Q 017982          319 LEVTIVNRWFRRGLKP  334 (363)
Q Consensus       319 lE~~vl~~~~~~g~~~  334 (363)
                      +|+.+...+.++|-..
T Consensus       153 ~~~~~~~~~~~~~~~~  168 (170)
T TIGR01668       153 VERTVLKFLVSRGGPA  168 (170)
T ss_pred             HHHHHHHHhccccCCC
Confidence            9998888776665443

This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.

>KOG2882 consensus p-Nitrophenyl phosphatase [Inorganic ion transport and metabolism]

Probab=99.78  E-value=8.1e-19  Score=169.64  Aligned_cols=171  Identities=18%  Similarity=0.108  Sum_probs=132.6

Q ss_pred             ccccCCCCCeEEEEcchhHHHHHHhhccccccccchhhhhhhhcCCCCCCCCcccCCccCCChHHHHHcCCCEEEEcCCc
Q 017982          113 EPRYNKDKYWTVLCTNMWWSQLKAALGQRINVEGIVSSTVVFAKDRHLALPHVTVPDIRYIDWAELQRRGFKGVVFDKDN  192 (363)
Q Consensus       113 ~~~~~~~~~k~~v~G~~~~~~~~~~~~q~ln~~Gi~~~~~~l~~~P~L~~P~~~v~sI~~Id~~~L~~~GIkaVV~DlDn  192 (363)
                      .++.+|.+++||++|++++       .++|..+|+...++.   ...... +....-+..   ..+ +..+++||+++|.
T Consensus        99 lk~~~~~~k~Vyvig~~gi-------~~eL~~aG~~~~g~~---~~~~~~-~~~~~~~~~---~~~-d~~VgAVvvg~D~  163 (306)
T KOG2882|consen   99 LKKRKPFGKKVYVIGEEGI-------REELDEAGFEYFGGG---PDGKDT-DGAKSFVLS---IGL-DPDVGAVVVGYDE  163 (306)
T ss_pred             HHHhCcCCCeEEEecchhh-------hHHHHHcCceeecCC---CCcccc-cccccchhh---cCC-CCCCCEEEEeccc
Confidence            3344589999999999999       677778898887764   111011 000011111   122 6689999999999


Q ss_pred             eeecCCCCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCC-C-----CccHHHHHHHHHHhCCeEEEcccCCCch-hHHH
Q 017982          193 TLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYE-Y-----DNDASKARKLEGKIGIKVIRHRVKKPAG-TAEE  265 (363)
Q Consensus       193 TL~~~~~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~-~-----dp~~~~a~~i~~~LGi~~I~~~~kKP~p-~~~~  265 (363)
                      .+.       |+.+..++++|+ .-| .++|+||.+...+ .     ...+..++.+....|...+.  .+||++ .++.
T Consensus       164 hfs-------y~KL~kA~~yLq-nP~-clflatn~D~~~p~~~~~~ipG~G~~v~av~~~t~R~P~v--~GKP~~~m~~~  232 (306)
T KOG2882|consen  164 HFS-------YPKLMKALNYLQ-NPG-CLFLATNRDATTPPTPGVEIPGAGSFVAAVKFATGRQPIV--LGKPSTFMFEY  232 (306)
T ss_pred             ccC-------HHHHHHHHHHhC-CCC-cEEEeccCccccCCCCCeeccCCccHHHHHHHHhcCCCee--cCCCCHHHHHH
Confidence            997       577888999997 445 8999999998775 2     12478889999999998764  689999 4689


Q ss_pred             HHHHhCCCCCcEEEEccCCcccHHHHHHcCCeEEEEcCCCCCCc
Q 017982          266 IEKHFGCQSSQLIMVGDRPFTDIVYGNRNGFLTILTEPLSLAEE  309 (363)
Q Consensus       266 alk~lgl~pee~vmVGDrL~TDI~~A~raGi~TIlV~p~~~~~e  309 (363)
                      ++++++++|++++|||||+.|||++|++.|+.|+||..+..+.|
T Consensus       233 l~~~~~i~psRt~mvGDRL~TDIlFG~~~G~~TLLvltGv~~le  276 (306)
T KOG2882|consen  233 LLEKFNIDPSRTCMVGDRLDTDILFGKNCGFKTLLVLSGVTTLE  276 (306)
T ss_pred             HHHHcCCCcceEEEEcccchhhhhHhhccCcceEEEecCcCcHH
Confidence            99999999999999999999999999999999999999987744

>PRK06769 hypothetical protein; Validated

Probab=99.75  E-value=8.4e-18  Score=151.04  Aligned_cols=123  Identities=23%  Similarity=0.260  Sum_probs=95.7

Q ss_pred             cCCCEEEEcCCceeecC------CCCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCeEEEc
Q 017982          181 RGFKGVVFDKDNTLTAP------YSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKVIRH  254 (363)
Q Consensus       181 ~GIkaVV~DlDnTL~~~------~~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~~I~~  254 (363)
                      -||+++++|+||||..+      ....++|++.++|++|+ +.|++++|+||+............+...++.+|+..++.
T Consensus         2 ~~~~~~~~d~d~~~~~~~~~~~~~~~~~~pgv~e~L~~Lk-~~G~~l~I~Tn~~~~~~~~~~~~~~~~~l~~~g~~~~~~   80 (173)
T PRK06769          2 TNIQAIFIDRDGTIGGDTTIHYPGSFTLFPFTKASLQKLK-ANHIKIFSFTNQPGIADGIATIADFVQELKGFGFDDIYL   80 (173)
T ss_pred             CCCcEEEEeCCCcccCCCCCCCHHHeEECCCHHHHHHHHH-HCCCEEEEEECCchhcCCcCCHHHHHHHHHhCCcCEEEE
Confidence            38999999999999876      23457999999999998 579999999998631100000112333455677764321


Q ss_pred             ---------ccCCCch-hHHHHHHHhCCCCCcEEEEccCCcccHHHHHHcCCeEEEEcCCC
Q 017982          255 ---------RVKKPAG-TAEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGFLTILTEPLS  305 (363)
Q Consensus       255 ---------~~kKP~p-~~~~alk~lgl~pee~vmVGDrL~TDI~~A~raGi~TIlV~p~~  305 (363)
                               ...||++ .+.+++++++++|++|+||||+. +||.+|+++|+.+|+|..+.
T Consensus        81 ~~~~~~~~~~~~KP~p~~~~~~~~~l~~~p~~~i~IGD~~-~Di~aA~~aGi~~i~v~~g~  140 (173)
T PRK06769         81 CPHKHGDGCECRKPSTGMLLQAAEKHGLDLTQCAVIGDRW-TDIVAAAKVNATTILVRTGA  140 (173)
T ss_pred             CcCCCCCCCCCCCCCHHHHHHHHHHcCCCHHHeEEEcCCH-HHHHHHHHCCCeEEEEecCC
Confidence                     3479999 57999999999999999999998 89999999999999998764

>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA

Probab=99.75  E-value=1e-17  Score=142.32  Aligned_cols=119  Identities=25%  Similarity=0.388  Sum_probs=94.4

Q ss_pred             CEEEEcCCceeec-------CCCCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCeEEE---
Q 017982          184 KGVVFDKDNTLTA-------PYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKVIR---  253 (363)
Q Consensus       184 kaVV~DlDnTL~~-------~~~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~~I~---  253 (363)
                      |++++|+|+||+.       +....++|++.++|++|+ +.|++++|+||+.+.....-....++.+++.+|+.+..   
T Consensus         1 k~~~~D~dgtL~~~~~~~~~~~~~~~~~~v~~~l~~L~-~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~   79 (132)
T TIGR01662         1 KGVVLDLDGTLTDDVPYVDDEDERILYPEVPDALAELK-EAGYKVVIVTNQSGIGRGKFSSGRVARRLEELGVPIDVLYA   79 (132)
T ss_pred             CEEEEeCCCceecCCCCCCCHHHheeCCCHHHHHHHHH-HCCCEEEEEECCccccccHHHHHHHHHHHHHCCCCEEEEEE
Confidence            6899999999983       233568999999999998 57999999999964321000024567788888887422   


Q ss_pred             -cccCCCch-hHHHHHHHh-CCCCCcEEEEccCCcccHHHHHHcCCeEEEEcC
Q 017982          254 -HRVKKPAG-TAEEIEKHF-GCQSSQLIMVGDRPFTDIVYGNRNGFLTILTEP  303 (363)
Q Consensus       254 -~~~kKP~p-~~~~alk~l-gl~pee~vmVGDrL~TDI~~A~raGi~TIlV~p  303 (363)
                       ....||.+ .+..+++++ +++|++++||||+..+||.+|+++|+.+|||.|
T Consensus        80 ~~~~~KP~~~~~~~~~~~~~~~~~~~~v~IGD~~~~Di~~A~~~Gi~~i~~~~  132 (132)
T TIGR01662        80 CPHCRKPKPGMFLEALKRFNEIDPEESVYVGDQDLTDLQAAKRAGLAFILVAP  132 (132)
T ss_pred             CCCCCCCChHHHHHHHHHcCCCChhheEEEcCCCcccHHHHHHCCCeEEEeeC
Confidence             13569998 579999999 599999999999655899999999999999976

In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.

>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain

Probab=99.69  E-value=1.7e-16  Score=138.48  Aligned_cols=118  Identities=19%  Similarity=0.334  Sum_probs=92.9

Q ss_pred             CEEEEcCCceeecCCC---------CCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCC--CCc-----cHHHHHHHHHHh
Q 017982          184 KGVVFDKDNTLTAPYS---------LTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYE--YDN-----DASKARKLEGKI  247 (363)
Q Consensus       184 kaVV~DlDnTL~~~~~---------~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~--~dp-----~~~~a~~i~~~L  247 (363)
                      ++++||+|+||+....         ..++|++.++|+.|+ +.|++++|+||+.....  ++.     ....+..+++.+
T Consensus         1 ~~~~~d~dgtl~~~~~~~~~~~~~~~~~~~g~~~~l~~Lk-~~g~~~~I~Sn~~~~~~~~~~~~~~~~~~~~~~~~l~~~   79 (147)
T TIGR01656         1 PALFLDRDGVINEDTVSDYPRSLDDWQLRPGAVPALLTLR-AAGYTVVVVTNQSGIGRGYFSAEAFRAPNGRVLELLRQL   79 (147)
T ss_pred             CeEEEeCCCceeccCCcccCCCHHHeEEcCChHHHHHHHH-HCCCEEEEEeCCCcccCCcCCHHHHHHHHHHHHHHHHhC
Confidence            4789999999987543         346999999999998 57999999999863210  000     013556677888


Q ss_pred             CCeE---EE--------cccCCCch-hHHHHHHHhCCCCCcEEEEccCCcccHHHHHHcCCeEEEEcC
Q 017982          248 GIKV---IR--------HRVKKPAG-TAEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGFLTILTEP  303 (363)
Q Consensus       248 Gi~~---I~--------~~~kKP~p-~~~~alk~lgl~pee~vmVGDrL~TDI~~A~raGi~TIlV~p  303 (363)
                      |+.+   +.        ....||.+ .+..+++.+++++++++||||+. .||.+|+++|+.+|||..
T Consensus        80 ~l~~~~~~~~~~~~~~~~~~~KP~~~~~~~~~~~~~~~~~e~i~IGDs~-~Di~~A~~~Gi~~v~i~~  146 (147)
T TIGR01656        80 GVAVDGVLFCPHHPADNCSCRKPKPGLILEALKRLGVDASRSLVVGDRL-RDLQAARNAGLAAVLLVD  146 (147)
T ss_pred             CCceeEEEECCCCCCCCCCCCCCCHHHHHHHHHHcCCChHHEEEEcCCH-HHHHHHHHCCCCEEEecC
Confidence            8863   21        12469999 57999999999999999999996 899999999999999975

This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.

>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase

Probab=99.66  E-value=6.7e-16  Score=138.32  Aligned_cols=120  Identities=18%  Similarity=0.241  Sum_probs=90.5

Q ss_pred             CEEEEcCCceeecCC-------CCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCC--CCc-----cHHHHHHHHHHhCC
Q 017982          184 KGVVFDKDNTLTAPY-------SLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYE--YDN-----DASKARKLEGKIGI  249 (363)
Q Consensus       184 kaVV~DlDnTL~~~~-------~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~--~dp-----~~~~a~~i~~~LGi  249 (363)
                      +++++|+||||+...       ...++|++.++|++|+ +.|++++|+||+.+...  +..     .......++..+++
T Consensus         2 ~~~~~D~Dgtl~~~~~~~~~~~~~~~~pgv~e~L~~Lk-~~G~~l~i~TN~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~   80 (176)
T TIGR00213         2 KAIFLDRDGTINIDHGYVHEIDNFEFIDGVIDALRELK-KMGYALVLVTNQSGIARGYFTEAQFEQLTEWMDWSLAERDV   80 (176)
T ss_pred             CEEEEeCCCCEeCCCCCCCCHHHeEECCCHHHHHHHHH-HCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCC
Confidence            689999999998422       3457899999999998 68999999999974211  000     01222344555555


Q ss_pred             e--EEEc---------------ccCCCch-hHHHHHHHhCCCCCcEEEEccCCcccHHHHHHcCCeE-EEEcCCC
Q 017982          250 K--VIRH---------------RVKKPAG-TAEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGFLT-ILTEPLS  305 (363)
Q Consensus       250 ~--~I~~---------------~~kKP~p-~~~~alk~lgl~pee~vmVGDrL~TDI~~A~raGi~T-IlV~p~~  305 (363)
                      .  .++.               ..+||.+ .+..+++++|+++++++||||+. +||.+|+++|+.+ |+|..+.
T Consensus        81 ~~~~i~~~~~~~~~~~~~~~~~~~~KP~p~~~~~a~~~~~~~~~~~v~VGDs~-~Di~aA~~aG~~~~i~v~~g~  154 (176)
T TIGR00213        81 DLDGIYYCPHHPEGVEEFRQVCDCRKPKPGMLLQARKELHIDMAQSYMVGDKL-EDMQAGVAAKVKTNVLVRTGK  154 (176)
T ss_pred             CccEEEECCCCCcccccccCCCCCCCCCHHHHHHHHHHcCcChhhEEEEcCCH-HHHHHHHHCCCcEEEEEecCC
Confidence            4  2211               1479999 56899999999999999999998 8999999999998 8998654

This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).

>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase

Probab=99.62  E-value=3e-15  Score=134.21  Aligned_cols=118  Identities=20%  Similarity=0.258  Sum_probs=91.2

Q ss_pred             CCCEEEEcCCceeecCCCCC-----------cchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCc----cHHHHHHHHHH
Q 017982          182 GFKGVVFDKDNTLTAPYSLT-----------LWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDN----DASKARKLEGK  246 (363)
Q Consensus       182 GIkaVV~DlDnTL~~~~~~~-----------~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp----~~~~a~~i~~~  246 (363)
                      -.|.+++|+||||..+.+..           ++|++.++|+.|+ +.|++++|+||+.+......    ....++.+++.
T Consensus        12 ~~k~~~~D~Dgtl~~~~~~~~~~~~~~~~~~~~pgv~e~L~~Lk-~~G~~l~I~TN~~~~~~~~~~~~~~~~~i~~~l~~   90 (166)
T TIGR01664        12 QSKVAAFDLDGTLITTRSGKVFPTSASDWRFLYPEIPAKLQELD-DEGYKIVIFTNQSGIGRGKLSAESFKNKIEAFLEK   90 (166)
T ss_pred             cCcEEEEeCCCceEecCCCCcccCChHHeEEecCCHHHHHHHHH-HCCCEEEEEeCCcccccCcccHHHHHHHHHHHHHH
Confidence            46889999999998754322           5799999999998 57999999999974211000    01246778888


Q ss_pred             hCCeEE--E----cccCCCch-hHHHHHHHhC--CCCCcEEEEccCC-------cccHHHHHHcCCeEEE
Q 017982          247 IGIKVI--R----HRVKKPAG-TAEEIEKHFG--CQSSQLIMVGDRP-------FTDIVYGNRNGFLTIL  300 (363)
Q Consensus       247 LGi~~I--~----~~~kKP~p-~~~~alk~lg--l~pee~vmVGDrL-------~TDI~~A~raGi~TIl  300 (363)
                      +|+++.  .    ...+||++ .+..+++++|  +++++++||||+.       .+||++|+++|+.++|
T Consensus        91 ~gl~~~~ii~~~~~~~~KP~p~~~~~~~~~~~~~~~~~~~v~VGD~~~~~~~~~~~Di~aA~~aGi~~~~  160 (166)
T TIGR01664        91 LKVPIQVLAATHAGLYRKPMTGMWEYLQSQYNSPIKMTRSFYVGDAAGRKLDFSDADIKFAKNLGLEFKY  160 (166)
T ss_pred             cCCCEEEEEecCCCCCCCCccHHHHHHHHHcCCCCCchhcEEEECCCCCCCCCchhHHHHHHHCCCCcCC
Confidence            898742  1    12579998 5689999999  9999999999995       3699999999999876

The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.

>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated

Probab=99.61  E-value=3.9e-15  Score=133.58  Aligned_cols=122  Identities=18%  Similarity=0.222  Sum_probs=91.7

Q ss_pred             CCCEEEEcCCceeecCC--------CCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCC--CCcc-----HHHHHHHHHH
Q 017982          182 GFKGVVFDKDNTLTAPY--------SLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYE--YDND-----ASKARKLEGK  246 (363)
Q Consensus       182 GIkaVV~DlDnTL~~~~--------~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~--~dp~-----~~~a~~i~~~  246 (363)
                      -+|+++||+|+||....        .+.++|++.++|++|+ +.|++++|+||+.+...  +...     ...+..+++.
T Consensus         2 ~~~~~~~d~~~t~~~~~~~~~~~~~~~~~~pgv~e~L~~Lk-~~g~~l~I~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~   80 (181)
T PRK08942          2 SMKAIFLDRDGVINVDSDGYVKSPDEWIPIPGSIEAIARLK-QAGYRVVVATNQSGIARGLFTEAQLNALHEKMDWSLAD   80 (181)
T ss_pred             CccEEEEECCCCcccCCccccCCHHHeEECCCHHHHHHHHH-HCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHH
Confidence            36899999999997422        2357899999999998 57999999999963210  0100     1223344555


Q ss_pred             hCCeE--EE---------cccCCCch-hHHHHHHHhCCCCCcEEEEccCCcccHHHHHHcCCeEEEEcCCC
Q 017982          247 IGIKV--IR---------HRVKKPAG-TAEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGFLTILTEPLS  305 (363)
Q Consensus       247 LGi~~--I~---------~~~kKP~p-~~~~alk~lgl~pee~vmVGDrL~TDI~~A~raGi~TIlV~p~~  305 (363)
                      +|+.+  ++         ....||++ .+..+++.+|+++++++||||+. .||.+|+++|+.+|+|..+.
T Consensus        81 ~g~~f~~i~~~~~~~~~~~~~~KP~p~~~~~~~~~l~~~~~~~~~VgDs~-~Di~~A~~aG~~~i~v~~g~  150 (181)
T PRK08942         81 RGGRLDGIYYCPHHPEDGCDCRKPKPGMLLSIAERLNIDLAGSPMVGDSL-RDLQAAAAAGVTPVLVRTGK  150 (181)
T ss_pred             cCCccceEEECCCCCCCCCcCCCCCHHHHHHHHHHcCCChhhEEEEeCCH-HHHHHHHHCCCeEEEEcCCC
Confidence            66531  21         13579999 57899999999999999999998 79999999999999997543

>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]

Probab=99.59  E-value=1e-14  Score=140.74  Aligned_cols=146  Identities=21%  Similarity=0.170  Sum_probs=114.4

Q ss_pred             CeEEEEcchhHHHHHHhhccccccccchhhhhhhhcCCCCCCCCcccCCccCCChHHHHHcCCCEEEEcCCceeecCCCC
Q 017982          121 YWTVLCTNMWWSQLKAALGQRINVEGIVSSTVVFAKDRHLALPHVTVPDIRYIDWAELQRRGFKGVVFDKDNTLTAPYSL  200 (363)
Q Consensus       121 ~k~~v~G~~~~~~~~~~~~q~ln~~Gi~~~~~~l~~~P~L~~P~~~v~sI~~Id~~~L~~~GIkaVV~DlDnTL~~~~~~  200 (363)
                      +|+|++|+.++.+.+.       ..|+......   +|                      .++.+|++.+|.+++     
T Consensus        92 ~kv~viG~~~l~~~l~-------~~G~~~~~~~---~~----------------------~~~d~Vv~g~d~~~~-----  134 (269)
T COG0647          92 KKVYVIGEEGLKEELE-------GAGFELVDEE---EP----------------------ARVDAVVVGLDRTLT-----  134 (269)
T ss_pred             CEEEEECCcchHHHHH-------hCCcEEeccC---CC----------------------CcccEEEEecCCCCC-----
Confidence            8999999999955555       3455544332   11                      026678888888876     


Q ss_pred             CcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCC-----CccHHHHHHHHHHhCCeEEEcccCCCch-hHHHHHHHhCCCC
Q 017982          201 TLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEY-----DNDASKARKLEGKIGIKVIRHRVKKPAG-TAEEIEKHFGCQS  274 (363)
Q Consensus       201 ~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~-----dp~~~~a~~i~~~LGi~~I~~~~kKP~p-~~~~alk~lgl~p  274 (363)
                        |+...+++..+++  | ..+|.||.+.+++.     ...++.+..+....|....  -.+||++ +|+.|++.++.++
T Consensus       135 --~e~l~~a~~~i~~--g-~~fI~tNpD~~~p~~~g~~pgaGai~~~~~~~tg~~~~--~~GKP~~~i~~~al~~~~~~~  207 (269)
T COG0647         135 --YEKLAEALLAIAA--G-APFIATNPDLTVPTERGLRPGAGAIAALLEQATGREPT--VIGKPSPAIYEAALEKLGLDR  207 (269)
T ss_pred             --HHHHHHHHHHHHc--C-CcEEEeCCCccccCCCCCccCcHHHHHHHHHhhCCccc--ccCCCCHHHHHHHHHHhCCCc
Confidence              4567777877763  6 78999999987752     1247888888888888763  2689999 5799999999999


Q ss_pred             CcEEEEccCCcccHHHHHHcCCeEEEEcCCCCCCch
Q 017982          275 SQLIMVGDRPFTDIVYGNRNGFLTILTEPLSLAEEP  310 (363)
Q Consensus       275 ee~vmVGDrL~TDI~~A~raGi~TIlV~p~~~~~e~  310 (363)
                      ++++||||++.|||++|+++||.|++|..+..+.+.
T Consensus       208 ~~~~mVGD~~~TDI~~a~~~G~~t~LV~TGv~~~~~  243 (269)
T COG0647         208 SEVLMVGDRLDTDILGAKAAGLDTLLVLTGVSSAED  243 (269)
T ss_pred             ccEEEEcCCchhhHHHHHHcCCCEEEEccCCCChhh
Confidence            999999999999999999999999999999876554

>TIGR01261 hisB_Nterm histidinol-phosphatase

Probab=99.58  E-value=9.5e-15  Score=130.59  Aligned_cols=122  Identities=20%  Similarity=0.190  Sum_probs=95.2

Q ss_pred             CEEEEcCCceeecCC----------CCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCC--Cc-----cHHHHHHHHHH
Q 017982          184 KGVVFDKDNTLTAPY----------SLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEY--DN-----DASKARKLEGK  246 (363)
Q Consensus       184 kaVV~DlDnTL~~~~----------~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~--dp-----~~~~a~~i~~~  246 (363)
                      ++++||.|+||+...          ...++|++.+.|++|+ +.|++++|+||++|....  ..     ....+..+++.
T Consensus         2 ~~~~~d~dg~l~~~~~~~~~~~~~~~~~~~pgv~e~L~~L~-~~g~~l~IvSN~~g~~~~~~~~~~~~~~~~~~~~~l~~   80 (161)
T TIGR01261         2 KILFIDRDGTLIEEPPSDFQVDALEKLRFEKGVIPALLKLK-KAGYKFVMVTNQDGLGTPSFPQADFDGPHNLMLQIFRS   80 (161)
T ss_pred             CEEEEeCCCCccccCCCccccCCHHHeeECCCHHHHHHHHH-HCCCeEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHH
Confidence            678999999998621          1247899999999998 579999999998643211  10     12345677888


Q ss_pred             hCCeE--E-Ec--------ccCCCch-hHHHHHHHhCCCCCcEEEEccCCcccHHHHHHcCCeEEEEcCCCCC
Q 017982          247 IGIKV--I-RH--------RVKKPAG-TAEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGFLTILTEPLSLA  307 (363)
Q Consensus       247 LGi~~--I-~~--------~~kKP~p-~~~~alk~lgl~pee~vmVGDrL~TDI~~A~raGi~TIlV~p~~~~  307 (363)
                      +|+.+  + ..        ...||.+ .+..+++++++++++++||||+. +||.+|+++|+.+|+|.+....
T Consensus        81 ~gl~fd~ii~~~~~~~~~~~~~KP~~~~~~~~~~~~~~~~~e~l~IGD~~-~Di~~A~~aGi~~i~~~~~~~~  152 (161)
T TIGR01261        81 QGIIFDDVLICPHFPDDNCDCRKPKIKLLEPYLKKNLIDKARSYVIGDRE-TDMQLAENLGIRGIQYDEEELN  152 (161)
T ss_pred             CCCceeEEEECCCCCCCCCCCCCCCHHHHHHHHHHcCCCHHHeEEEeCCH-HHHHHHHHCCCeEEEEChhhcC
Confidence            88873  2 11        2569998 56899999999999999999997 8999999999999999877533

This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.

>COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]

Probab=99.53  E-value=9.4e-14  Score=126.92  Aligned_cols=123  Identities=20%  Similarity=0.235  Sum_probs=98.1

Q ss_pred             CCEEEEcCCceeecCCC--------CCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCC-------ccHHHHHHHHHHh
Q 017982          183 FKGVVFDKDNTLTAPYS--------LTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYD-------NDASKARKLEGKI  247 (363)
Q Consensus       183 IkaVV~DlDnTL~~~~~--------~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~d-------p~~~~a~~i~~~L  247 (363)
                      -+++++|.|+||+....        +.+.|++.+++..|+ +.|++++|+||.+|.....       .....+..+++..
T Consensus         5 ~k~lflDRDGtin~d~~~yv~~~~~~~~~~g~i~al~~l~-~~gy~lVvvTNQsGi~rgyf~~~~f~~~~~~m~~~l~~~   83 (181)
T COG0241           5 QKALFLDRDGTINIDKGDYVDSLDDFQFIPGVIPALLKLQ-RAGYKLVVVTNQSGIGRGYFTEADFDKLHNKMLKILASQ   83 (181)
T ss_pred             CcEEEEcCCCceecCCCcccCcHHHhccCccHHHHHHHHH-hCCCeEEEEECCCCccccCccHHHHHHHHHHHHHHHHHc
Confidence            57899999999986443        357899999999998 6899999999999876421       1122344566666


Q ss_pred             CCeE--EE---------cccCCCchhH-HHHHHHhCCCCCcEEEEccCCcccHHHHHHcCCeEEEEcCCCCC
Q 017982          248 GIKV--IR---------HRVKKPAGTA-EEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGFLTILTEPLSLA  307 (363)
Q Consensus       248 Gi~~--I~---------~~~kKP~p~~-~~alk~lgl~pee~vmVGDrL~TDI~~A~raGi~TIlV~p~~~~  307 (363)
                      |+.+  |.         ..++||.++| ..+++++++++++.+||||++ +|+++|.++|+..+++..+...
T Consensus        84 gv~id~i~~Cph~p~~~c~cRKP~~gm~~~~~~~~~iD~~~s~~VGD~~-~Dlq~a~n~gi~~~~~~~~~~~  154 (181)
T COG0241          84 GVKIDGILYCPHHPEDNCDCRKPKPGMLLSALKEYNIDLSRSYVVGDRL-TDLQAAENAGIKGVLVLTGIGV  154 (181)
T ss_pred             CCccceEEECCCCCCCCCcccCCChHHHHHHHHHhCCCccceEEecCcH-HHHHHHHHCCCCceEEEcCccc
Confidence            7542  21         3689999965 899999999999999999999 9999999999999999855443

>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family

Probab=99.52  E-value=1.3e-13  Score=132.37  Aligned_cols=116  Identities=26%  Similarity=0.338  Sum_probs=89.9

Q ss_pred             cCCCEEEEcCCceeecCCCCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCC-C----c-cHHHHHHHHHHhCCeEEEc
Q 017982          181 RGFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEY-D----N-DASKARKLEGKIGIKVIRH  254 (363)
Q Consensus       181 ~GIkaVV~DlDnTL~~~~~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~-d----p-~~~~a~~i~~~LGi~~I~~  254 (363)
                      ..+.+|+++.|..++       |+++.++++.|+ ..|. ++|+||.+..++. .    + .+..+..+....|...+. 
T Consensus       130 ~~~~~Vvv~~d~~~~-------y~~i~~~l~~L~-~~g~-~~i~Tn~d~~~~~~~~~~~~~~g~~~~~i~~~~g~~~~~-  199 (279)
T TIGR01452       130 ENVGAVVVGYDEHFS-------YAKLREACAHLR-EPGC-LFVATNRDPWHPLSDGSRTPGTGSLVAAIETASGRQPLV-  199 (279)
T ss_pred             CCCCEEEEecCCCCC-------HHHHHHHHHHHh-cCCC-EEEEeCCCCCCCCcCCCcccChHHHHHHHHHHhCCceec-
Confidence            367888888777654       789999999997 4675 8999999864431 1    1 133444555555665542 


Q ss_pred             ccCCCch-hHHHHHHHhCCCCCcEEEEccCCcccHHHHHHcCCeEEEEcCCCCC
Q 017982          255 RVKKPAG-TAEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGFLTILTEPLSLA  307 (363)
Q Consensus       255 ~~kKP~p-~~~~alk~lgl~pee~vmVGDrL~TDI~~A~raGi~TIlV~p~~~~  307 (363)
                       .+||++ .+..+++++|++|++++||||++.+||.+|+++|+.+|+|..+...
T Consensus       200 -~gKP~p~~~~~~~~~~~~~~~~~lmIGD~~~tDI~~A~~aGi~si~V~~G~~~  252 (279)
T TIGR01452       200 -VGKPSPYMFECITENFSIDPARTLMVGDRLETDILFGHRCGMTTVLVLSGVSR  252 (279)
T ss_pred             -cCCCCHHHHHHHHHHhCCChhhEEEECCChHHHHHHHHHcCCcEEEECCCCCC
Confidence             589999 5689999999999999999999889999999999999999876654

This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.

>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional

Probab=99.48  E-value=4.6e-13  Score=133.79  Aligned_cols=121  Identities=20%  Similarity=0.226  Sum_probs=94.4

Q ss_pred             CCEEEEcCCceeecCC----------CCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCC--CCc-----cHHHHHHHHH
Q 017982          183 FKGVVFDKDNTLTAPY----------SLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYE--YDN-----DASKARKLEG  245 (363)
Q Consensus       183 IkaVV~DlDnTL~~~~----------~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~--~dp-----~~~~a~~i~~  245 (363)
                      .+++++|.|+||+...          ...++|++.++|++|+ +.|++++|+||+++...  +..     ....+..+++
T Consensus         2 ~k~l~lDrDgtl~~~~~~~y~~~~~~~~~l~pGV~e~L~~Lk-~~G~kL~IvTNq~g~G~~~~~~~~l~~~~~~i~~iL~   80 (354)
T PRK05446          2 QKILFIDRDGTLIEEPPTDFQVDSLDKLAFEPGVIPALLKLQ-KAGYKLVMVTNQDGLGTDSFPQEDFDPPHNLMMQIFE   80 (354)
T ss_pred             CcEEEEeCCCCccCCCCccccccCcccceECcCHHHHHHHHH-hCCCeEEEEECCccccCccccHHHHhhHHHHHHHHHH
Confidence            4689999999998642          3467999999999998 68999999999753221  110     1234556777


Q ss_pred             HhCCeE--EE---------cccCCCch-hHHHHHHHhCCCCCcEEEEccCCcccHHHHHHcCCeEEEEcCCC
Q 017982          246 KIGIKV--IR---------HRVKKPAG-TAEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGFLTILTEPLS  305 (363)
Q Consensus       246 ~LGi~~--I~---------~~~kKP~p-~~~~alk~lgl~pee~vmVGDrL~TDI~~A~raGi~TIlV~p~~  305 (363)
                      .+|+.+  +.         ...+||.+ .+..+++.+++++++++||||+. +|+.+|+++||.+|||++..
T Consensus        81 ~~gl~fd~i~i~~~~~sd~~~~rKP~p~~l~~a~~~l~v~~~~svmIGDs~-sDi~aAk~aGi~~I~v~~~~  151 (354)
T PRK05446         81 SQGIKFDEVLICPHFPEDNCSCRKPKTGLVEEYLAEGAIDLANSYVIGDRE-TDVQLAENMGIKGIRYARET  151 (354)
T ss_pred             HcCCceeeEEEeCCcCcccCCCCCCCHHHHHHHHHHcCCCcccEEEEcCCH-HHHHHHHHCCCeEEEEECCC
Confidence            778763  21         13679999 46888999999999999999998 89999999999999998754

>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II

Probab=99.47  E-value=2.3e-13  Score=122.71  Aligned_cols=98  Identities=19%  Similarity=0.275  Sum_probs=83.0

Q ss_pred             CCCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCe----EEE----cccCCCch-hHHHHHH
Q 017982          198 YSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK----VIR----HRVKKPAG-TAEEIEK  268 (363)
Q Consensus       198 ~~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~----~I~----~~~kKP~p-~~~~alk  268 (363)
                      ....++|++.++|++|+ +.|++++|+||+.        ...++.+++.+|+.    .+.    .+..||++ .|..+++
T Consensus        89 ~~~~~~~~~~~~L~~L~-~~g~~~~i~Sn~~--------~~~~~~~l~~~gl~~~fd~i~~s~~~~~~KP~~~~~~~~~~  159 (198)
T TIGR01428        89 LRLPPHPDVPAGLRALK-ERGYRLAILSNGS--------PAMLKSLVKHAGLDDPFDAVLSADAVRAYKPAPQVYQLALE  159 (198)
T ss_pred             hcCCCCCCHHHHHHHHH-HCCCeEEEEeCCC--------HHHHHHHHHHCCChhhhheeEehhhcCCCCCCHHHHHHHHH
Confidence            34567899999999998 5799999999996        35667777888874    222    24679999 6799999


Q ss_pred             HhCCCCCcEEEEccCCcccHHHHHHcCCeEEEEcCCC
Q 017982          269 HFGCQSSQLIMVGDRPFTDIVYGNRNGFLTILTEPLS  305 (363)
Q Consensus       269 ~lgl~pee~vmVGDrL~TDI~~A~raGi~TIlV~p~~  305 (363)
                      ++|++|++++||||+. .||.+|+++||.+|||.+..
T Consensus       160 ~~~~~p~~~~~vgD~~-~Di~~A~~~G~~~i~v~r~~  195 (198)
T TIGR01428       160 ALGVPPDEVLFVASNP-WDLGGAKKFGFKTAWVNRPG  195 (198)
T ss_pred             HhCCChhhEEEEeCCH-HHHHHHHHCCCcEEEecCCC
Confidence            9999999999999999 89999999999999998754

Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.

>PLN02575 haloacid dehalogenase-like hydrolase

Probab=99.44  E-value=1.5e-12  Score=131.24  Aligned_cols=93  Identities=14%  Similarity=0.120  Sum_probs=79.4

Q ss_pred             cchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCe----EEE----cccCCCch-hHHHHHHHhCC
Q 017982          202 LWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK----VIR----HRVKKPAG-TAEEIEKHFGC  272 (363)
Q Consensus       202 ~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~----~I~----~~~kKP~p-~~~~alk~lgl  272 (363)
                      ++|++.++|+.|+ +.|++++|+||+.        ...++.+++.+|+.    .|.    ...+||++ .+..+++++|+
T Consensus       217 l~pGa~ElL~~Lk-~~GiklaIaSn~~--------~~~~~~~L~~lgL~~yFd~Iv~sddv~~~KP~Peifl~A~~~lgl  287 (381)
T PLN02575        217 LRTGSQEFVNVLM-NYKIPMALVSTRP--------RKTLENAIGSIGIRGFFSVIVAAEDVYRGKPDPEMFIYAAQLLNF  287 (381)
T ss_pred             cCcCHHHHHHHHH-HCCCeEEEEeCCC--------HHHHHHHHHHcCCHHHceEEEecCcCCCCCCCHHHHHHHHHHcCC
Confidence            4678888999998 5799999999996        46778888888875    232    23579999 67899999999


Q ss_pred             CCCcEEEEccCCcccHHHHHHcCCeEEEEcCC
Q 017982          273 QSSQLIMVGDRPFTDIVYGNRNGFLTILTEPL  304 (363)
Q Consensus       273 ~pee~vmVGDrL~TDI~~A~raGi~TIlV~p~  304 (363)
                      +|++|+||||+. .||++|+++||.+|+|...
T Consensus       288 ~Peecl~IGDS~-~DIeAAk~AGm~~IgV~~~  318 (381)
T PLN02575        288 IPERCIVFGNSN-QTVEAAHDARMKCVAVASK  318 (381)
T ss_pred             CcccEEEEcCCH-HHHHHHHHcCCEEEEECCC
Confidence            999999999998 7999999999999999753

>COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only]

Probab=99.42  E-value=7.1e-13  Score=120.92  Aligned_cols=96  Identities=18%  Similarity=0.230  Sum_probs=80.7

Q ss_pred             CCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCe------EEE--cccCCCch-hHHHHHHHh
Q 017982          200 LTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK------VIR--HRVKKPAG-TAEEIEKHF  270 (363)
Q Consensus       200 ~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~------~I~--~~~kKP~p-~~~~alk~l  270 (363)
                      ...+|++.+.|+.++. . ++++|+||+.        .......++.+|+.      +++  .+..||++ +|+.+++++
T Consensus        98 ~~~~~~~~~~L~~l~~-~-~~l~ilTNg~--------~~~~~~~l~~~gl~~~Fd~v~~s~~~g~~KP~~~~f~~~~~~~  167 (229)
T COG1011          98 LPDYPEALEALKELGK-K-YKLGILTNGA--------RPHQERKLRQLGLLDYFDAVFISEDVGVAKPDPEIFEYALEKL  167 (229)
T ss_pred             CccChhHHHHHHHHHh-h-ccEEEEeCCC--------hHHHHHHHHHcCChhhhheEEEecccccCCCCcHHHHHHHHHc
Confidence            5678999999999985 3 7899999975        25566777777764      122  35679999 679999999


Q ss_pred             CCCCCcEEEEccCCcccHHHHHHcCCeEEEEcCCC
Q 017982          271 GCQSSQLIMVGDRPFTDIVYGNRNGFLTILTEPLS  305 (363)
Q Consensus       271 gl~pee~vmVGDrL~TDI~~A~raGi~TIlV~p~~  305 (363)
                      |++|++++||||++.+||.+|+++||.|||+....
T Consensus       168 g~~p~~~l~VgD~~~~di~gA~~~G~~~vwi~~~~  202 (229)
T COG1011         168 GVPPEEALFVGDSLENDILGARALGMKTVWINRGG  202 (229)
T ss_pred             CCCcceEEEECCChhhhhHHHHhcCcEEEEECCCC
Confidence            99999999999999999999999999999998654

>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253

Probab=99.41  E-value=9.2e-13  Score=120.20  Aligned_cols=97  Identities=19%  Similarity=0.288  Sum_probs=81.2

Q ss_pred             CCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCe----EEE----cccCCCch-hHHHHHHHh
Q 017982          200 LTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK----VIR----HRVKKPAG-TAEEIEKHF  270 (363)
Q Consensus       200 ~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~----~I~----~~~kKP~p-~~~~alk~l  270 (363)
                      ..++|++.++|++|+ +.|++++|+||+..        ..+...++.+|+.    .+.    .+..||++ .+..+++++
T Consensus        93 ~~~~~g~~~~L~~L~-~~g~~~~i~Tn~~~--------~~~~~~l~~~~l~~~f~~i~~~~~~~~~KP~~~~~~~~~~~~  163 (221)
T TIGR02253        93 LRVYPGVRDTLMELR-ESGYRLGIITDGLP--------VKQWEKLERLGVRDFFDAVITSEEEGVEKPHPKIFYAALKRL  163 (221)
T ss_pred             CCCCCCHHHHHHHHH-HCCCEEEEEeCCch--------HHHHHHHHhCChHHhccEEEEeccCCCCCCCHHHHHHHHHHc
Confidence            457899999999998 57999999999962        4456667777875    222    24579999 679999999


Q ss_pred             CCCCCcEEEEccCCcccHHHHHHcCCeEEEEcCCC
Q 017982          271 GCQSSQLIMVGDRPFTDIVYGNRNGFLTILTEPLS  305 (363)
Q Consensus       271 gl~pee~vmVGDrL~TDI~~A~raGi~TIlV~p~~  305 (363)
                      |+++++++||||++.+||.+|+++|+.+|+|..+.
T Consensus       164 ~~~~~~~~~igDs~~~di~~A~~aG~~~i~~~~~~  198 (221)
T TIGR02253       164 GVKPEEAVMVGDRLDKDIKGAKNLGMKTVWINQGK  198 (221)
T ss_pred             CCChhhEEEECCChHHHHHHHHHCCCEEEEECCCC
Confidence            99999999999998789999999999999998654

This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).

>PLN02645 phosphoglycolate phosphatase

Probab=99.41  E-value=2.4e-12  Score=125.77  Aligned_cols=162  Identities=18%  Similarity=0.200  Sum_probs=107.5

Q ss_pred             CCCCeEEEEcchhHHHHHHhhccccccccchhhhhhhhcCCCCCCCCcccCCccCCChHHH--HHcCCCEEEEcCCceee
Q 017982          118 KDKYWTVLCTNMWWSQLKAALGQRINVEGIVSSTVVFAKDRHLALPHVTVPDIRYIDWAEL--QRRGFKGVVFDKDNTLT  195 (363)
Q Consensus       118 ~~~~k~~v~G~~~~~~~~~~~~q~ln~~Gi~~~~~~l~~~P~L~~P~~~v~sI~~Id~~~L--~~~GIkaVV~DlDnTL~  195 (363)
                      +.+++++|+|..+..       +++...|+...++.  .++....         ..+...+  ....+.+|+++.|..++
T Consensus       110 ~~~~~V~viG~~~~~-------~~l~~~Gi~~~~g~--~~~~~~~---------~~~~~~~~~~~~~i~aVvvg~d~~~~  171 (311)
T PLN02645        110 PKDKKVYVIGEEGIL-------EELELAGFQYLGGP--EDGDKKI---------ELKPGFLMEHDKDVGAVVVGFDRYIN  171 (311)
T ss_pred             CCCCEEEEEcCHHHH-------HHHHHCCCEEecCc--ccccccc---------ccccccccccCCCCCEEEEecCCCCC
Confidence            456789999999883       44445566654431  1110000         0011000  02356888888888775


Q ss_pred             cCCCCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCC-----c-cHHHHHHHHHHhCCeEEEcccCCCch-hHHHHHH
Q 017982          196 APYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYD-----N-DASKARKLEGKIGIKVIRHRVKKPAG-TAEEIEK  268 (363)
Q Consensus       196 ~~~~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~d-----p-~~~~a~~i~~~LGi~~I~~~~kKP~p-~~~~alk  268 (363)
                             +..+..+...|+...| .++|+||.+..++..     + .+..+..+....+...+.  .+||++ .++.+++
T Consensus       172 -------~~~l~~a~~~l~~~~g-~~~i~tn~d~~~~~~~~~~~~g~g~~~~~i~~~~~~~~~~--~gKP~p~~~~~a~~  241 (311)
T PLN02645        172 -------YYKIQYATLCIRENPG-CLFIATNRDAVTHLTDAQEWAGAGSMVGAIKGSTEREPLV--VGKPSTFMMDYLAN  241 (311)
T ss_pred             -------HHHHHHHHHHHhcCCC-CEEEEeCCCCCCCCCCCCCccchHHHHHHHHHHhCCCccc--CCCChHHHHHHHHH
Confidence                   3445555655542234 799999998654211     1 234566666666765542  589999 5689999


Q ss_pred             HhCCCCCcEEEEccCCcccHHHHHHcCCeEEEEcCCCCC
Q 017982          269 HFGCQSSQLIMVGDRPFTDIVYGNRNGFLTILTEPLSLA  307 (363)
Q Consensus       269 ~lgl~pee~vmVGDrL~TDI~~A~raGi~TIlV~p~~~~  307 (363)
                      ++++++++++||||++.+||.+|+++|+.+|+|..+...
T Consensus       242 ~~~~~~~~~~~VGD~~~~Di~~A~~aG~~~ilV~~G~~~  280 (311)
T PLN02645        242 KFGIEKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTS  280 (311)
T ss_pred             HcCCCcccEEEEcCCcHHHHHHHHHcCCCEEEEcCCCCC
Confidence            999999999999999989999999999999999876644

>KOG3085 consensus Predicted hydrolase (HAD superfamily) [General function prediction only]

Probab=99.41  E-value=7e-13  Score=125.78  Aligned_cols=96  Identities=16%  Similarity=0.223  Sum_probs=80.9

Q ss_pred             CCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCe----EEE----cccCCCch-hHHHHHHH
Q 017982          199 SLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK----VIR----HRVKKPAG-TAEEIEKH  269 (363)
Q Consensus       199 ~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~----~I~----~~~kKP~p-~~~~alk~  269 (363)
                      .+.+.+++.++++.|+ +.|..++|+||.+         .+.+.++..+|+.    ++.    .+..||+| +|+.++++
T Consensus       111 ~~~~~~~~~~~lq~lR-~~g~~l~iisN~d---------~r~~~~l~~~~l~~~fD~vv~S~e~g~~KPDp~If~~al~~  180 (237)
T KOG3085|consen  111 AWKYLDGMQELLQKLR-KKGTILGIISNFD---------DRLRLLLLPLGLSAYFDFVVESCEVGLEKPDPRIFQLALER  180 (237)
T ss_pred             CceeccHHHHHHHHHH-hCCeEEEEecCCc---------HHHHHHhhccCHHHhhhhhhhhhhhccCCCChHHHHHHHHH
Confidence            3445677779999998 6799999999997         5666777777774    221    46789999 67999999


Q ss_pred             hCCCCCcEEEEccCCcccHHHHHHcCCeEEEEcCC
Q 017982          270 FGCQSSQLIMVGDRPFTDIVYGNRNGFLTILTEPL  304 (363)
Q Consensus       270 lgl~pee~vmVGDrL~TDI~~A~raGi~TIlV~p~  304 (363)
                      +|+.|++|+||||.+.+|+++|+++|+.+++|...
T Consensus       181 l~v~Pee~vhIgD~l~nD~~gA~~~G~~ailv~~~  215 (237)
T KOG3085|consen  181 LGVKPEECVHIGDLLENDYEGARNLGWHAILVDNS  215 (237)
T ss_pred             hCCChHHeEEecCccccccHhHHHcCCEEEEEccc
Confidence            99999999999999999999999999999999843

>TIGR01685 MDP-1 magnesium-dependent phosphatase-1

Probab=99.40  E-value=9.1e-13  Score=119.72  Aligned_cols=107  Identities=16%  Similarity=0.062  Sum_probs=76.1

Q ss_pred             CcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCe---------E----EE-c---ccCCCchh-
Q 017982          201 TLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK---------V----IR-H---RVKKPAGT-  262 (363)
Q Consensus       201 ~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~---------~----I~-~---~~kKP~p~-  262 (363)
                      .++|++.+.|+.|+ +.|++++|+||+..       ...+..+++.+|+.         -    +. .   ...||.+. 
T Consensus        45 ~l~pGv~elL~~Lk-~~G~~l~I~Sn~~~-------~~~~~~~L~~~~l~~~~~~~~~~~~Fd~iv~~~~~~~~kp~~~i  116 (174)
T TIGR01685        45 TLIKEVRDVLQTLK-DAGTYLATASWNDV-------PEWAYEILGTFEITYAGKTVPMHSLFDDRIEIYKPNKAKQLEMI  116 (174)
T ss_pred             EEcccHHHHHHHHH-HCCCEEEEEeCCCC-------hHHHHHHHHhCCcCCCCCcccHHHhceeeeeccCCchHHHHHHH
Confidence            47899999999998 57999999999831       25566777777764         1    11 1   11233332 


Q ss_pred             HHHHHHHh--CCCCCcEEEEccCCcccHHHHHHcCCeEEEEcCCCCCCchhHHHHHHHHHH
Q 017982          263 AEEIEKHF--GCQSSQLIMVGDRPFTDIVYGNRNGFLTILTEPLSLAEEPFIVRQVRKLEV  321 (363)
Q Consensus       263 ~~~alk~l--gl~pee~vmVGDrL~TDI~~A~raGi~TIlV~p~~~~~e~~~t~~~R~lE~  321 (363)
                      ++.+.+.+  |++|++|+||||+. .||.+|+++|+.++++..+....+     ..+.+|+
T Consensus       117 ~~~~~~~~~~gl~p~e~l~VgDs~-~di~aA~~aGi~~i~v~~g~~~~~-----~~~~~~~  171 (174)
T TIGR01685       117 LQKVNKVDPSVLKPAQILFFDDRT-DNVREVWGYGVTSCYCPSGMDKGT-----FKKILEM  171 (174)
T ss_pred             HHHhhhcccCCCCHHHeEEEcChh-HhHHHHHHhCCEEEEcCCCccHHH-----HHHHHHH
Confidence            23343444  69999999999999 799999999999999976543312     3556665

This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues.

>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase

Probab=99.39  E-value=8.2e-13  Score=119.40  Aligned_cols=91  Identities=19%  Similarity=0.243  Sum_probs=75.7

Q ss_pred             CCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCe----EEE----cccCCCch-hHHHHHHHh
Q 017982          200 LTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK----VIR----HRVKKPAG-TAEEIEKHF  270 (363)
Q Consensus       200 ~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~----~I~----~~~kKP~p-~~~~alk~l  270 (363)
                      ..++|++.++|++|+ +.|++++|+||+.         ..+...++.+|+.    .+.    .+..||++ .+..+++++
T Consensus       104 ~~~~~g~~~~l~~L~-~~g~~~~i~Sn~~---------~~~~~~l~~~~l~~~fd~i~~s~~~~~~KP~~~~~~~~~~~~  173 (203)
T TIGR02252       104 WQVYPDAIKLLKDLR-ERGLILGVISNFD---------SRLRGLLEALGLLEYFDFVVTSYEVGAEKPDPKIFQEALERA  173 (203)
T ss_pred             ceeCcCHHHHHHHHH-HCCCEEEEEeCCc---------hhHHHHHHHCCcHHhcceEEeecccCCCCCCHHHHHHHHHHc
Confidence            357899999999998 5799999999985         2245566777774    222    35679999 579999999


Q ss_pred             CCCCCcEEEEccCCcccHHHHHHcCCeEEE
Q 017982          271 GCQSSQLIMVGDRPFTDIVYGNRNGFLTIL  300 (363)
Q Consensus       271 gl~pee~vmVGDrL~TDI~~A~raGi~TIl  300 (363)
                      |++|++++||||++.+||.+|+++|+.+||
T Consensus       174 ~~~~~~~~~IgD~~~~Di~~A~~aG~~~i~  203 (203)
T TIGR02252       174 GISPEEALHIGDSLRNDYQGARAAGWRALL  203 (203)
T ss_pred             CCChhHEEEECCCchHHHHHHHHcCCeeeC
Confidence            999999999999987899999999999986

Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.

>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457

Probab=99.39  E-value=6.1e-12  Score=119.24  Aligned_cols=127  Identities=20%  Similarity=0.233  Sum_probs=96.3

Q ss_pred             HHHHHcCCCEEEEcCCceeecCCCCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCC-----ccHHHHHHHHHHhCCe
Q 017982          176 AELQRRGFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYD-----NDASKARKLEGKIGIK  250 (363)
Q Consensus       176 ~~L~~~GIkaVV~DlDnTL~~~~~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~d-----p~~~~a~~i~~~LGi~  250 (363)
                      +.|.+.|+....-+.|-.+..+.....|+.+..++..++  .|.. +|+||.+..++..     ..+..+..+....+..
T Consensus        96 ~~l~~~g~~~~~~~~~~Vvvg~~~~~~y~~l~~a~~~l~--~g~~-~i~tN~D~~~~~~~~~~~~~G~~~~~i~~~~~~~  172 (249)
T TIGR01457        96 EAIKEAGYVEDKEKPDYVVVGLDRQIDYEKFATATLAIR--KGAH-FIGTNGDLAIPTERGLLPGNGSLITVLEVATGVK  172 (249)
T ss_pred             HHHHHcCCEecCCCCCEEEEeCCCCCCHHHHHHHHHHHH--CCCe-EEEECCCCCCCCCCCCCCCcHHHHHHHHHHhCCC
Confidence            456667765322234445555555667888888888875  3755 9999999777532     1356677777777877


Q ss_pred             EEEcccCCCch-hHHHHHHHhCCCCCcEEEEccCCcccHHHHHHcCCeEEEEcCCCCC
Q 017982          251 VIRHRVKKPAG-TAEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGFLTILTEPLSLA  307 (363)
Q Consensus       251 ~I~~~~kKP~p-~~~~alk~lgl~pee~vmVGDrL~TDI~~A~raGi~TIlV~p~~~~  307 (363)
                      .+.  .+||++ .++.+++.+++++++++||||++.+||.+|+++|+.++||..+..+
T Consensus       173 ~~~--~gKP~~~~~~~~~~~~~~~~~~~~~VGD~~~~Di~~a~~~G~~~v~v~~G~~~  228 (249)
T TIGR01457       173 PVY--IGKPNAIIMEKAVEHLGTEREETLMVGDNYLTDIRAGIDAGIDTLLVHTGVTK  228 (249)
T ss_pred             ccc--cCCChHHHHHHHHHHcCCCcccEEEECCCchhhHHHHHHcCCcEEEEcCCCCC
Confidence            653  579999 5689999999999999999999989999999999999999876544

This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.

>PTZ00445 p36-lilke protein; Provisional

Probab=99.38  E-value=2.9e-12  Score=119.60  Aligned_cols=127  Identities=12%  Similarity=0.098  Sum_probs=101.2

Q ss_pred             HHHHHcCCCEEEEcCCceeec-----CCCCC---------cchhHHHHHHHHHHhCCCeEEEEeCCCCCC-CCC------
Q 017982          176 AELQRRGFKGVVFDKDNTLTA-----PYSLT---------LWGPLSSSIEQCKSVFGHDIAVFSNSAGLY-EYD------  234 (363)
Q Consensus       176 ~~L~~~GIkaVV~DlDnTL~~-----~~~~~---------~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~-~~d------  234 (363)
                      +.|++.|||+|++|+||||+.     |.+..         +.|+...|+.+|+ +.|++|+|||=++... +..      
T Consensus        36 ~~L~~~GIk~Va~D~DnTlI~~HsgG~~~~~~~~~~~~~~~tpefk~~~~~l~-~~~I~v~VVTfSd~~~~~~~~~~~~I  114 (219)
T PTZ00445         36 DLLNECGIKVIASDFDLTMITKHSGGYIDPDNDDIRVLTSVTPDFKILGKRLK-NSNIKISVVTFSDKELIPSENRPRYI  114 (219)
T ss_pred             HHHHHcCCeEEEecchhhhhhhhcccccCCCcchhhhhccCCHHHHHHHHHHH-HCCCeEEEEEccchhhccccCCccee
Confidence            679999999999999999988     77665         7999999999998 5899999999887422 100      


Q ss_pred             ccHHHHHHHHHHhCCe----EEE---------------cccCCCch-h--H--HHHHHHhCCCCCcEEEEccCCcccHHH
Q 017982          235 NDASKARKLEGKIGIK----VIR---------------HRVKKPAG-T--A--EEIEKHFGCQSSQLIMVGDRPFTDIVY  290 (363)
Q Consensus       235 p~~~~a~~i~~~LGi~----~I~---------------~~~kKP~p-~--~--~~alk~lgl~pee~vmVGDrL~TDI~~  290 (363)
                      .....++..++..+..    -++               .+..||.+ +  +  +++++++|++|+|+++|.|+. ..|.+
T Consensus       115 sg~~li~~~lk~s~~~~~i~~~~~yyp~~w~~p~~y~~~gl~KPdp~iK~yHle~ll~~~gl~peE~LFIDD~~-~NVea  193 (219)
T PTZ00445        115 SGDRMVEAALKKSKCDFKIKKVYAYYPKFWQEPSDYRPLGLDAPMPLDKSYHLKQVCSDFNVNPDEILFIDDDM-NNCKN  193 (219)
T ss_pred             chHHHHHHHHHhcCccceeeeeeeeCCcccCChhhhhhhcccCCCccchHHHHHHHHHHcCCCHHHeEeecCCH-HHHHH
Confidence            1234566666644432    111               25789998 5  6  899999999999999999998 78999


Q ss_pred             HHHcCCeEEEEcCC
Q 017982          291 GNRNGFLTILTEPL  304 (363)
Q Consensus       291 A~raGi~TIlV~p~  304 (363)
                      |.++|+.++++.+.
T Consensus       194 A~~lGi~ai~f~~~  207 (219)
T PTZ00445        194 ALKEGYIALHVTGN  207 (219)
T ss_pred             HHHCCCEEEEcCCh
Confidence            99999999999743

>cd01427 HAD_like Haloacid dehalogenase-like hydrolases

Probab=99.38  E-value=3.5e-12  Score=104.30  Aligned_cols=107  Identities=24%  Similarity=0.364  Sum_probs=86.2

Q ss_pred             EEEEcCCceeecCCC-------CCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCe----EEE
Q 017982          185 GVVFDKDNTLTAPYS-------LTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK----VIR  253 (363)
Q Consensus       185 aVV~DlDnTL~~~~~-------~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~----~I~  253 (363)
                      +++||+|+||.....       ..+++++.++|++|+ +.|++++|+||+.        ...++.+++.+|+.    .+.
T Consensus         1 ~~vfD~D~tl~~~~~~~~~~~~~~~~~~~~~~l~~l~-~~g~~i~ivS~~~--------~~~~~~~~~~~~~~~~~~~i~   71 (139)
T cd01427           1 AVLFDLDGTLLDSEPGIAEIEELELYPGVKEALKELK-EKGIKLALATNKS--------RREVLELLEELGLDDYFDPVI   71 (139)
T ss_pred             CeEEccCCceEccCccccccccCCcCcCHHHHHHHHH-HCCCeEEEEeCch--------HHHHHHHHHHcCCchhhhhee
Confidence            378999999986443       278999999999998 5799999999996        35677777777762    121


Q ss_pred             ----ccc----------------CCCch-hHHHHHHHhCCCCCcEEEEccCCcccHHHHHHcCCeEEEE
Q 017982          254 ----HRV----------------KKPAG-TAEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGFLTILT  301 (363)
Q Consensus       254 ----~~~----------------kKP~p-~~~~alk~lgl~pee~vmVGDrL~TDI~~A~raGi~TIlV  301 (363)
                          ...                +||.+ .+..++++++..++++++|||+. +|+.+|+++|+.+|+|
T Consensus        72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~igD~~-~d~~~~~~~g~~~i~v  139 (139)
T cd01427          72 TSNGAAIYYPKEGLFLGGGPFDIGKPNPDKLLAALKLLGVDPEEVLMVGDSL-NDIEMAKAAGGLGVAV  139 (139)
T ss_pred             ccchhhhhcccccccccccccccCCCCHHHHHHHHHHcCCChhhEEEeCCCH-HHHHHHHHcCCceeeC
Confidence                011                17777 46889999999999999999999 8999999999999985

The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.

>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A

Probab=99.37  E-value=3.1e-12  Score=109.80  Aligned_cols=93  Identities=20%  Similarity=0.381  Sum_probs=79.7

Q ss_pred             CCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCe----EEE----cccCCCch-hHHHHHHH
Q 017982          199 SLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK----VIR----HRVKKPAG-TAEEIEKH  269 (363)
Q Consensus       199 ~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~----~I~----~~~kKP~p-~~~~alk~  269 (363)
                      ...++|++.++|+.|+ +.|++++|+||++        ...+...++.+|+.    .+.    .+..||++ .+..++++
T Consensus        75 ~~~~~~~~~~~L~~l~-~~~~~~~i~Sn~~--------~~~~~~~l~~~~~~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~  145 (176)
T PF13419_consen   75 KLQPYPGVRELLERLK-AKGIPLVIVSNGS--------RERIERVLERLGLDDYFDEIISSDDVGSRKPDPDAYRRALEK  145 (176)
T ss_dssp             GEEESTTHHHHHHHHH-HTTSEEEEEESSE--------HHHHHHHHHHTTHGGGCSEEEEGGGSSSSTTSHHHHHHHHHH
T ss_pred             ccchhhhhhhhhhhcc-cccceeEEeecCC--------cccccccccccccccccccccccchhhhhhhHHHHHHHHHHH
Confidence            3457899999999998 5799999999996        36677888888875    232    34579998 57999999


Q ss_pred             hCCCCCcEEEEccCCcccHHHHHHcCCeEEEE
Q 017982          270 FGCQSSQLIMVGDRPFTDIVYGNRNGFLTILT  301 (363)
Q Consensus       270 lgl~pee~vmVGDrL~TDI~~A~raGi~TIlV  301 (363)
                      +|++|++++||||+. .|+.+|+++|+.||+|
T Consensus       146 ~~~~p~~~~~vgD~~-~d~~~A~~~G~~~i~v  176 (176)
T PF13419_consen  146 LGIPPEEILFVGDSP-SDVEAAKEAGIKTIWV  176 (176)
T ss_dssp             HTSSGGGEEEEESSH-HHHHHHHHTTSEEEEE
T ss_pred             cCCCcceEEEEeCCH-HHHHHHHHcCCeEEeC
Confidence            999999999999999 9999999999999997

...

>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family

Probab=99.37  E-value=4.1e-12  Score=112.16  Aligned_cols=108  Identities=14%  Similarity=0.184  Sum_probs=84.7

Q ss_pred             CCEEEEcCCceeecC---CCCC--------cchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCeE
Q 017982          183 FKGVVFDKDNTLTAP---YSLT--------LWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKV  251 (363)
Q Consensus       183 IkaVV~DlDnTL~~~---~~~~--------~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~~  251 (363)
                      +++|++|+|+||..-   +...        +.++  .+|++|+ +.|++++|+||...        ..+..+++.+|+..
T Consensus         1 ~~~~~~D~Dgtl~~~~~~~~~~~~~~~~~~~~~~--~~i~~Lk-~~G~~i~IvTn~~~--------~~~~~~l~~~gi~~   69 (154)
T TIGR01670         1 IRLLILDVDGVLTDGKIYYTNNGEEIKAFNVRDG--YGIRCAL-KSGIEVAIITGRKA--------KLVEDRCKTLGITH   69 (154)
T ss_pred             CeEEEEeCceeEEcCeEEECCCCcEEEEEechhH--HHHHHHH-HCCCEEEEEECCCC--------HHHHHHHHHcCCCE
Confidence            578999999999861   1111        2222  2788998 57999999999962        56788899999985


Q ss_pred             EEcccCCCch-hHHHHHHHhCCCCCcEEEEccCCcccHHHHHHcCCeEEEEcCC
Q 017982          252 IRHRVKKPAG-TAEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGFLTILTEPL  304 (363)
Q Consensus       252 I~~~~kKP~p-~~~~alk~lgl~pee~vmVGDrL~TDI~~A~raGi~TIlV~p~  304 (363)
                      ++. ..||.+ .+.++++++|+++++++||||+. +|+.+++.+|+. +.|.+.
T Consensus        70 ~~~-~~~~k~~~~~~~~~~~~~~~~~~~~vGDs~-~D~~~~~~ag~~-~~v~~~  120 (154)
T TIGR01670        70 LYQ-GQSNKLIAFSDILEKLALAPENVAYIGDDL-IDWPVMEKVGLS-VAVADA  120 (154)
T ss_pred             EEe-cccchHHHHHHHHHHcCCCHHHEEEECCCH-HHHHHHHHCCCe-EecCCc
Confidence            543 346776 56889999999999999999998 899999999996 777543

The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.

>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional

Probab=99.36  E-value=3.1e-12  Score=115.99  Aligned_cols=112  Identities=12%  Similarity=0.135  Sum_probs=86.7

Q ss_pred             HHcCCCEEEEcCCceeecCC------CCCcchhHH---HHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCC
Q 017982          179 QRRGFKGVVFDKDNTLTAPY------SLTLWGPLS---SSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGI  249 (363)
Q Consensus       179 ~~~GIkaVV~DlDnTL~~~~------~~~~~p~v~---e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi  249 (363)
                      +..++|.+++|+||||+.+.      .....+...   ..++.|+ +.|++++|+||..        ...+..+++.+|+
T Consensus        17 ~~~~ikli~~D~Dgtl~~~~i~~~~~~~~~~~~~~~d~~~i~~L~-~~Gi~v~I~T~~~--------~~~v~~~l~~lgl   87 (183)
T PRK09484         17 KAENIRLLICDVDGVFSDGLIYMGNNGEELKAFNVRDGYGIRCLL-TSGIEVAIITGRK--------SKLVEDRMTTLGI   87 (183)
T ss_pred             HhhCceEEEEcCCeeeecCEEEEcCCCCEEEEEeccchHHHHHHH-HCCCEEEEEeCCC--------cHHHHHHHHHcCC
Confidence            35689999999999998641      111111111   4677887 5799999999996        3678889999999


Q ss_pred             eEEEcccCCCch-hHHHHHHHhCCCCCcEEEEccCCcccHHHHHHcCCeEEEEc
Q 017982          250 KVIRHRVKKPAG-TAEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGFLTILTE  302 (363)
Q Consensus       250 ~~I~~~~kKP~p-~~~~alk~lgl~pee~vmVGDrL~TDI~~A~raGi~TIlV~  302 (363)
                      ..++. ..++.+ .+..+++++|+++++++||||+. .|+.+++++|+. +.|.
T Consensus        88 ~~~f~-g~~~k~~~l~~~~~~~gl~~~ev~~VGDs~-~D~~~a~~aG~~-~~v~  138 (183)
T PRK09484         88 THLYQ-GQSNKLIAFSDLLEKLAIAPEQVAYIGDDL-IDWPVMEKVGLS-VAVA  138 (183)
T ss_pred             ceeec-CCCcHHHHHHHHHHHhCCCHHHEEEECCCH-HHHHHHHHCCCe-EecC
Confidence            86654 234444 57899999999999999999998 899999999998 4454

>PLN02770 haloacid dehalogenase-like hydrolase family protein

Probab=99.35  E-value=3.3e-12  Score=120.49  Aligned_cols=97  Identities=13%  Similarity=0.091  Sum_probs=82.4

Q ss_pred             CCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCe----EEE----cccCCCch-hHHHHHHH
Q 017982          199 SLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK----VIR----HRVKKPAG-TAEEIEKH  269 (363)
Q Consensus       199 ~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~----~I~----~~~kKP~p-~~~~alk~  269 (363)
                      ...++|++.+.|+.|+ +.|++++|+||+.        ...++.+++.+|+.    .+.    ....||+| .+..++++
T Consensus       106 ~~~l~pgv~e~L~~L~-~~g~~l~I~Tn~~--------~~~~~~~l~~~gl~~~Fd~iv~~~~~~~~KP~p~~~~~a~~~  176 (248)
T PLN02770        106 QLKPLNGLYKLKKWIE-DRGLKRAAVTNAP--------RENAELMISLLGLSDFFQAVIIGSECEHAKPHPDPYLKALEV  176 (248)
T ss_pred             cCCcCccHHHHHHHHH-HcCCeEEEEeCCC--------HHHHHHHHHHcCChhhCcEEEecCcCCCCCCChHHHHHHHHH
Confidence            3457899999999998 5799999999996        36778888888875    222    23579999 67999999


Q ss_pred             hCCCCCcEEEEccCCcccHHHHHHcCCeEEEEcCCC
Q 017982          270 FGCQSSQLIMVGDRPFTDIVYGNRNGFLTILTEPLS  305 (363)
Q Consensus       270 lgl~pee~vmVGDrL~TDI~~A~raGi~TIlV~p~~  305 (363)
                      +|++|++++||||+. .||++|+++|+.+|+|..+.
T Consensus       177 ~~~~~~~~l~vgDs~-~Di~aA~~aGi~~i~v~~g~  211 (248)
T PLN02770        177 LKVSKDHTFVFEDSV-SGIKAGVAAGMPVVGLTTRN  211 (248)
T ss_pred             hCCChhHEEEEcCCH-HHHHHHHHCCCEEEEEeCCC
Confidence            999999999999999 89999999999999997543

>PLN02940 riboflavin kinase

Probab=99.35  E-value=3.9e-12  Score=127.98  Aligned_cols=94  Identities=21%  Similarity=0.236  Sum_probs=76.3

Q ss_pred             CcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHH-HhCCe----EEE----cccCCCch-hHHHHHHHh
Q 017982          201 TLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEG-KIGIK----VIR----HRVKKPAG-TAEEIEKHF  270 (363)
Q Consensus       201 ~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~-~LGi~----~I~----~~~kKP~p-~~~~alk~l  270 (363)
                      .++|++.+.|+.|+ +.|++++|+||+.        ...+...++ .+|+.    .+.    ....||++ .+..+++++
T Consensus        93 ~l~pGv~elL~~Lk-~~g~~l~IvTn~~--------~~~~~~~l~~~~gl~~~Fd~ii~~d~v~~~KP~p~~~~~a~~~l  163 (382)
T PLN02940         93 KALPGANRLIKHLK-SHGVPMALASNSP--------RANIEAKISCHQGWKESFSVIVGGDEVEKGKPSPDIFLEAAKRL  163 (382)
T ss_pred             CCCcCHHHHHHHHH-HCCCcEEEEeCCc--------HHHHHHHHHhccChHhhCCEEEehhhcCCCCCCHHHHHHHHHHc
Confidence            46788999999998 5799999999996        244444444 56653    332    23579999 579999999


Q ss_pred             CCCCCcEEEEccCCcccHHHHHHcCCeEEEEcCC
Q 017982          271 GCQSSQLIMVGDRPFTDIVYGNRNGFLTILTEPL  304 (363)
Q Consensus       271 gl~pee~vmVGDrL~TDI~~A~raGi~TIlV~p~  304 (363)
                      |++|++|+||||+. .||.+|+++||.+|+|..+
T Consensus       164 gv~p~~~l~VGDs~-~Di~aA~~aGi~~I~v~~g  196 (382)
T PLN02940        164 NVEPSNCLVIEDSL-PGVMAGKAAGMEVIAVPSI  196 (382)
T ss_pred             CCChhHEEEEeCCH-HHHHHHHHcCCEEEEECCC
Confidence            99999999999999 7999999999999999754

>PRK11587 putative phosphatase; Provisional

Probab=99.34  E-value=4.7e-12  Score=116.51  Aligned_cols=96  Identities=16%  Similarity=0.182  Sum_probs=78.1

Q ss_pred             CCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCe---EE-E---cccCCCch-hHHHHHHHh
Q 017982          199 SLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK---VI-R---HRVKKPAG-TAEEIEKHF  270 (363)
Q Consensus       199 ~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~---~I-~---~~~kKP~p-~~~~alk~l  270 (363)
                      ...++|++.++|+.|+ +.|++++|+||+..        ..+...++..++.   .+ .   ....||+| .+..+++++
T Consensus        81 ~~~~~pg~~e~L~~L~-~~g~~~~ivTn~~~--------~~~~~~l~~~~l~~~~~i~~~~~~~~~KP~p~~~~~~~~~~  151 (218)
T PRK11587         81 GITALPGAIALLNHLN-KLGIPWAIVTSGSV--------PVASARHKAAGLPAPEVFVTAERVKRGKPEPDAYLLGAQLL  151 (218)
T ss_pred             CceeCcCHHHHHHHHH-HcCCcEEEEcCCCc--------hHHHHHHHhcCCCCccEEEEHHHhcCCCCCcHHHHHHHHHc
Confidence            3457899999999998 57999999999962        3345555666654   22 2   23579999 578999999


Q ss_pred             CCCCCcEEEEccCCcccHHHHHHcCCeEEEEcCC
Q 017982          271 GCQSSQLIMVGDRPFTDIVYGNRNGFLTILTEPL  304 (363)
Q Consensus       271 gl~pee~vmVGDrL~TDI~~A~raGi~TIlV~p~  304 (363)
                      |++|++++||||+. .||.+|+++|+.+|+|...
T Consensus       152 g~~p~~~l~igDs~-~di~aA~~aG~~~i~v~~~  184 (218)
T PRK11587        152 GLAPQECVVVEDAP-AGVLSGLAAGCHVIAVNAP  184 (218)
T ss_pred             CCCcccEEEEecch-hhhHHHHHCCCEEEEECCC
Confidence            99999999999998 8999999999999999743

>PRK10826 2-deoxyglucose-6-phosphatase; Provisional

Probab=99.34  E-value=4.7e-12  Score=116.55  Aligned_cols=99  Identities=12%  Similarity=0.150  Sum_probs=82.5

Q ss_pred             CCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCeE----EE----cccCCCch-hHHHHHHH
Q 017982          199 SLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKV----IR----HRVKKPAG-TAEEIEKH  269 (363)
Q Consensus       199 ~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~~----I~----~~~kKP~p-~~~~alk~  269 (363)
                      ...++|++.++|+.|+ +.|++++|+||+.        ...++.+++.+|+..    +.    ....||++ .+..+++.
T Consensus        90 ~~~~~~g~~~~l~~l~-~~g~~~~i~S~~~--------~~~~~~~l~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~  160 (222)
T PRK10826         90 TRPLLPGVREALALCK-AQGLKIGLASASP--------LHMLEAVLTMFDLRDYFDALASAEKLPYSKPHPEVYLNCAAK  160 (222)
T ss_pred             CCCCCCCHHHHHHHHH-HCCCeEEEEeCCc--------HHHHHHHHHhCcchhcccEEEEcccCCCCCCCHHHHHHHHHH
Confidence            3568999999999998 5799999999986        356677788888752    21    23579998 67999999


Q ss_pred             hCCCCCcEEEEccCCcccHHHHHHcCCeEEEEcCCCCC
Q 017982          270 FGCQSSQLIMVGDRPFTDIVYGNRNGFLTILTEPLSLA  307 (363)
Q Consensus       270 lgl~pee~vmVGDrL~TDI~~A~raGi~TIlV~p~~~~  307 (363)
                      +|++|++|+||||+. .||.+|+++|+.+|+|......
T Consensus       161 ~~~~~~~~~~igDs~-~Di~aA~~aG~~~i~v~~~~~~  197 (222)
T PRK10826        161 LGVDPLTCVALEDSF-NGMIAAKAARMRSIVVPAPEQQ  197 (222)
T ss_pred             cCCCHHHeEEEcCCh-hhHHHHHHcCCEEEEecCCccC
Confidence            999999999999999 8999999999999999855433

>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase

Probab=99.33  E-value=4.8e-12  Score=118.82  Aligned_cols=97  Identities=16%  Similarity=0.098  Sum_probs=80.3

Q ss_pred             CCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCe-----EEE----cccCCCch-hHHHHHH
Q 017982          199 SLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK-----VIR----HRVKKPAG-TAEEIEK  268 (363)
Q Consensus       199 ~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~-----~I~----~~~kKP~p-~~~~alk  268 (363)
                      ...++|++.++|+.|+ +.|++++|+||+.        ...++.+++.+|+.     .|.    ....||+| .+..+++
T Consensus        97 ~~~~~pg~~e~L~~L~-~~g~~l~IvT~~~--------~~~~~~~l~~~gl~~~f~d~ii~~~~~~~~KP~p~~~~~a~~  167 (253)
T TIGR01422        97 YSSPIPGVIEVIAYLR-ARGIKIGSTTGYT--------REMMDVVAPEAALQGYRPDYNVTTDDVPAGRPAPWMALKNAI  167 (253)
T ss_pred             cCccCCCHHHHHHHHH-HCCCeEEEECCCc--------HHHHHHHHHHHHhcCCCCceEEccccCCCCCCCHHHHHHHHH
Confidence            3467899999999998 5799999999996        35666777766653     222    23679999 6789999


Q ss_pred             HhCCC-CCcEEEEccCCcccHHHHHHcCCeEEEEcCCC
Q 017982          269 HFGCQ-SSQLIMVGDRPFTDIVYGNRNGFLTILTEPLS  305 (363)
Q Consensus       269 ~lgl~-pee~vmVGDrL~TDI~~A~raGi~TIlV~p~~  305 (363)
                      ++|+. |++++||||+. .||.+|+++||.+|+|..+.
T Consensus       168 ~l~~~~~~~~l~IGDs~-~Di~aA~~aGi~~i~v~~g~  204 (253)
T TIGR01422       168 ELGVYDVAACVKVGDTV-PDIEEGRNAGMWTVGLILSS  204 (253)
T ss_pred             HcCCCCchheEEECCcH-HHHHHHHHCCCeEEEEecCC
Confidence            99995 99999999999 89999999999999998664

This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.

>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein

Probab=99.33  E-value=7.6e-12  Score=113.61  Aligned_cols=97  Identities=19%  Similarity=0.238  Sum_probs=81.4

Q ss_pred             CCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCe----EEE----cccCCCch-hHHHHHHH
Q 017982          199 SLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK----VIR----HRVKKPAG-TAEEIEKH  269 (363)
Q Consensus       199 ~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~----~I~----~~~kKP~p-~~~~alk~  269 (363)
                      ...++|++.+.|++|+ +.|++++|+||+.        ...+..+++.+|+.    .+.    ....||.+ .+..++++
T Consensus        73 ~~~~~~g~~~~L~~L~-~~g~~~~i~Sn~~--------~~~~~~~l~~~~l~~~f~~i~~~~~~~~~KP~~~~~~~~~~~  143 (205)
T TIGR01454        73 EVEVFPGVPELLAELR-ADGVGTAIATGKS--------GPRARSLLEALGLLPLFDHVIGSDEVPRPKPAPDIVREALRL  143 (205)
T ss_pred             ccccCCCHHHHHHHHH-HCCCeEEEEeCCc--------hHHHHHHHHHcCChhheeeEEecCcCCCCCCChHHHHHHHHH
Confidence            4567999999999998 5799999999996        35577778888874    222    23579998 57899999


Q ss_pred             hCCCCCcEEEEccCCcccHHHHHHcCCeEEEEcCCC
Q 017982          270 FGCQSSQLIMVGDRPFTDIVYGNRNGFLTILTEPLS  305 (363)
Q Consensus       270 lgl~pee~vmVGDrL~TDI~~A~raGi~TIlV~p~~  305 (363)
                      +|+++++++||||+. .||.+|+++|+.+|+|.-+.
T Consensus       144 ~~~~~~~~l~igD~~-~Di~aA~~~Gi~~i~~~~g~  178 (205)
T TIGR01454       144 LDVPPEDAVMVGDAV-TDLASARAAGTATVAALWGE  178 (205)
T ss_pred             cCCChhheEEEcCCH-HHHHHHHHcCCeEEEEEecC
Confidence            999999999999998 89999999999999997554

The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.

>COG0546 Gph Predicted phosphatases [General function prediction only]

Probab=99.32  E-value=8.1e-12  Score=115.83  Aligned_cols=95  Identities=17%  Similarity=0.192  Sum_probs=82.3

Q ss_pred             CcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCeEE----E----cccCCCch-hHHHHHHHhC
Q 017982          201 TLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKVI----R----HRVKKPAG-TAEEIEKHFG  271 (363)
Q Consensus       201 ~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~~I----~----~~~kKP~p-~~~~alk~lg  271 (363)
                      .++|++.+.|..|+ ..|++++|+||+.        ...+..+++.+|+...    .    ....||+| .+..+++.+|
T Consensus        89 ~~~~gv~e~L~~L~-~~g~~l~i~T~k~--------~~~~~~~l~~~gl~~~F~~i~g~~~~~~~KP~P~~l~~~~~~~~  159 (220)
T COG0546          89 RLFPGVKELLAALK-SAGYKLGIVTNKP--------ERELDILLKALGLADYFDVIVGGDDVPPPKPDPEPLLLLLEKLG  159 (220)
T ss_pred             ccCCCHHHHHHHHH-hCCCeEEEEeCCc--------HHHHHHHHHHhCCccccceEEcCCCCCCCCcCHHHHHHHHHHhC
Confidence            57999999999998 6899999999996        4678889999998632    2    24679999 4688999999


Q ss_pred             CCCCcEEEEccCCcccHHHHHHcCCeEEEEcCCC
Q 017982          272 CQSSQLIMVGDRPFTDIVYGNRNGFLTILTEPLS  305 (363)
Q Consensus       272 l~pee~vmVGDrL~TDI~~A~raGi~TIlV~p~~  305 (363)
                      ++|++++||||+. .||++|+++|+.+|+|..+.
T Consensus       160 ~~~~~~l~VGDs~-~Di~aA~~Ag~~~v~v~~g~  192 (220)
T COG0546         160 LDPEEALMVGDSL-NDILAAKAAGVPAVGVTWGY  192 (220)
T ss_pred             CChhheEEECCCH-HHHHHHHHcCCCEEEEECCC
Confidence            9988999999999 79999999999999998654

>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic

Probab=99.31  E-value=9.7e-12  Score=112.63  Aligned_cols=96  Identities=19%  Similarity=0.279  Sum_probs=81.0

Q ss_pred             CCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCe----EEE----cccCCCch-hHHHHHHHh
Q 017982          200 LTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK----VIR----HRVKKPAG-TAEEIEKHF  270 (363)
Q Consensus       200 ~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~----~I~----~~~kKP~p-~~~~alk~l  270 (363)
                      ..++|++.++|+.|+ +.|++++|+||+.        ...++.+++.+|+.    .+.    ....||+| .+..+++++
T Consensus        84 ~~~~~g~~~~L~~l~-~~g~~~~i~S~~~--------~~~~~~~l~~~~l~~~f~~~~~~~~~~~~Kp~p~~~~~~~~~~  154 (213)
T TIGR01449        84 TSVFPGVEATLGALR-AKGLRLGLVTNKP--------TPLARPLLELLGLAKYFSVLIGGDSLAQRKPHPDPLLLAAERL  154 (213)
T ss_pred             CccCCCHHHHHHHHH-HCCCeEEEEeCCC--------HHHHHHHHHHcCcHhhCcEEEecCCCCCCCCChHHHHHHHHHc
Confidence            457899999999998 5799999999996        35677888888874    222    23469998 679999999


Q ss_pred             CCCCCcEEEEccCCcccHHHHHHcCCeEEEEcCCC
Q 017982          271 GCQSSQLIMVGDRPFTDIVYGNRNGFLTILTEPLS  305 (363)
Q Consensus       271 gl~pee~vmVGDrL~TDI~~A~raGi~TIlV~p~~  305 (363)
                      |++|++++||||+. .|+.+|+++|+.+|+|..+.
T Consensus       155 ~~~~~~~~~igDs~-~d~~aa~~aG~~~i~v~~g~  188 (213)
T TIGR01449       155 GVAPQQMVYVGDSR-VDIQAARAAGCPSVLLTYGY  188 (213)
T ss_pred             CCChhHeEEeCCCH-HHHHHHHHCCCeEEEEccCC
Confidence            99999999999997 89999999999999997544

This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).

>TIGR03351 PhnX-like phosphonatase-like hydrolase

Probab=99.31  E-value=9e-12  Score=113.95  Aligned_cols=96  Identities=17%  Similarity=0.165  Sum_probs=80.3

Q ss_pred             CCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCe------EEE----cccCCCch-hHHHHHH
Q 017982          200 LTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK------VIR----HRVKKPAG-TAEEIEK  268 (363)
Q Consensus       200 ~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~------~I~----~~~kKP~p-~~~~alk  268 (363)
                      ..++|++.++|+.|+ +.|++++|+||+.        ...++.+++.+|+.      .+.    ...+||+| .+..+++
T Consensus        86 ~~l~~G~~~~L~~L~-~~g~~~~ivT~~~--------~~~~~~~l~~~~l~~~~~f~~i~~~~~~~~~KP~p~~~~~a~~  156 (220)
T TIGR03351        86 PVALPGAEEAFRSLR-SSGIKVALTTGFD--------RDTAERLLEKLGWTVGDDVDAVVCPSDVAAGRPAPDLILRAME  156 (220)
T ss_pred             CccCCCHHHHHHHHH-HCCCEEEEEeCCc--------hHHHHHHHHHhhhhhhccCCEEEcCCcCCCCCCCHHHHHHHHH
Confidence            468999999999998 5799999999996        35667777777764      122    23579999 6789999


Q ss_pred             HhCCC-CCcEEEEccCCcccHHHHHHcCCeE-EEEcCCC
Q 017982          269 HFGCQ-SSQLIMVGDRPFTDIVYGNRNGFLT-ILTEPLS  305 (363)
Q Consensus       269 ~lgl~-pee~vmVGDrL~TDI~~A~raGi~T-IlV~p~~  305 (363)
                      ++|+. |++++||||+. +||.+|+++||.+ |+|..+.
T Consensus       157 ~~~~~~~~~~~~igD~~-~Di~aa~~aG~~~~i~~~~g~  194 (220)
T TIGR03351       157 LTGVQDVQSVAVAGDTP-NDLEAGINAGAGAVVGVLTGA  194 (220)
T ss_pred             HcCCCChhHeEEeCCCH-HHHHHHHHCCCCeEEEEecCC
Confidence            99997 79999999998 8999999999999 8997654

This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the

>PLN03243 haloacid dehalogenase-like hydrolase; Provisional

Probab=99.31  E-value=7.9e-12  Score=119.64  Aligned_cols=94  Identities=14%  Similarity=0.116  Sum_probs=80.7

Q ss_pred             CCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCe----EEE----cccCCCch-hHHHHHHHh
Q 017982          200 LTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK----VIR----HRVKKPAG-TAEEIEKHF  270 (363)
Q Consensus       200 ~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~----~I~----~~~kKP~p-~~~~alk~l  270 (363)
                      ..++|++.++|+.|+ ..|++++|+||+.        ...+..+++.+|+.    .+.    ....||+| .+..+++++
T Consensus       108 ~~l~pg~~e~L~~L~-~~g~~l~I~Tn~~--------~~~~~~~l~~~gl~~~Fd~ii~~~d~~~~KP~Pe~~~~a~~~l  178 (260)
T PLN03243        108 YRLRPGSREFVQALK-KHEIPIAVASTRP--------RRYLERAIEAVGMEGFFSVVLAAEDVYRGKPDPEMFMYAAERL  178 (260)
T ss_pred             cccCCCHHHHHHHHH-HCCCEEEEEeCcC--------HHHHHHHHHHcCCHhhCcEEEecccCCCCCCCHHHHHHHHHHh
Confidence            457899999999998 5799999999996        36677888888875    222    23579999 679999999


Q ss_pred             CCCCCcEEEEccCCcccHHHHHHcCCeEEEEcC
Q 017982          271 GCQSSQLIMVGDRPFTDIVYGNRNGFLTILTEP  303 (363)
Q Consensus       271 gl~pee~vmVGDrL~TDI~~A~raGi~TIlV~p  303 (363)
                      |++|++|+||||+. .||.+|+++||.+|+|..
T Consensus       179 ~~~p~~~l~IgDs~-~Di~aA~~aG~~~i~v~g  210 (260)
T PLN03243        179 GFIPERCIVFGNSN-SSVEAAHDGCMKCVAVAG  210 (260)
T ss_pred             CCChHHeEEEcCCH-HHHHHHHHcCCEEEEEec
Confidence            99999999999998 899999999999999973

>PRK09449 dUMP phosphatase; Provisional

Probab=99.31  E-value=9.1e-12  Score=114.23  Aligned_cols=95  Identities=18%  Similarity=0.204  Sum_probs=77.5

Q ss_pred             CCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCe----EEE----cccCCCch-hHHHHHHHh
Q 017982          200 LTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK----VIR----HRVKKPAG-TAEEIEKHF  270 (363)
Q Consensus       200 ~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~----~I~----~~~kKP~p-~~~~alk~l  270 (363)
                      ..++|++.+.|+.|+ + |++++|+||+.        ...+...++.+|+.    .+.    .+..||++ .+..+++++
T Consensus        94 ~~~~~g~~~~L~~L~-~-~~~~~i~Tn~~--------~~~~~~~l~~~~l~~~fd~v~~~~~~~~~KP~p~~~~~~~~~~  163 (224)
T PRK09449         94 CTPLPGAVELLNALR-G-KVKMGIITNGF--------TELQQVRLERTGLRDYFDLLVISEQVGVAKPDVAIFDYALEQM  163 (224)
T ss_pred             CccCccHHHHHHHHH-h-CCeEEEEeCCc--------HHHHHHHHHhCChHHHcCEEEEECccCCCCCCHHHHHHHHHHc
Confidence            457899999999998 4 79999999986        25566677777764    222    24579999 679999999


Q ss_pred             CCC-CCcEEEEccCCcccHHHHHHcCCeEEEEcCC
Q 017982          271 GCQ-SSQLIMVGDRPFTDIVYGNRNGFLTILTEPL  304 (363)
Q Consensus       271 gl~-pee~vmVGDrL~TDI~~A~raGi~TIlV~p~  304 (363)
                      |+. +++++||||+...||.+|+++|+.+|+|...
T Consensus       164 ~~~~~~~~~~vgD~~~~Di~~A~~aG~~~i~~~~~  198 (224)
T PRK09449        164 GNPDRSRVLMVGDNLHSDILGGINAGIDTCWLNAH  198 (224)
T ss_pred             CCCCcccEEEEcCCcHHHHHHHHHCCCcEEEECCC
Confidence            985 5899999999866999999999999999743

>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED

Probab=99.31  E-value=1.4e-11  Score=108.31  Aligned_cols=91  Identities=22%  Similarity=0.320  Sum_probs=74.9

Q ss_pred             CCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCe----EEE----cccCCCch-hHHHHHHHh
Q 017982          200 LTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK----VIR----HRVKKPAG-TAEEIEKHF  270 (363)
Q Consensus       200 ~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~----~I~----~~~kKP~p-~~~~alk~l  270 (363)
                      ..++|++.++|+.|+ +.|++++|+||+..        .. ..+...+|+.    .+.    .+..||++ .+..+++++
T Consensus        84 ~~~~~g~~~~l~~l~-~~g~~~~i~Tn~~~--------~~-~~~~~~~~l~~~f~~i~~~~~~~~~KP~~~~~~~~~~~~  153 (183)
T TIGR01509        84 LKPLPGVEPLLEALR-ARGKKLALLTNSPR--------DH-AVLVQELGLRDLFDVVIFSGDVGRGKPDPDIYLLALKKL  153 (183)
T ss_pred             CccCcCHHHHHHHHH-HCCCeEEEEeCCch--------HH-HHHHHhcCCHHHCCEEEEcCCCCCCCCCHHHHHHHHHHc
Confidence            467899999999998 57999999999962        22 4444447764    222    25689998 579999999


Q ss_pred             CCCCCcEEEEccCCcccHHHHHHcCCeEEEE
Q 017982          271 GCQSSQLIMVGDRPFTDIVYGNRNGFLTILT  301 (363)
Q Consensus       271 gl~pee~vmVGDrL~TDI~~A~raGi~TIlV  301 (363)
                      |++|++++||||+. .||.+|+++|+.+|+|
T Consensus       154 ~~~~~~~~~vgD~~-~di~aA~~~G~~~i~v  183 (183)
T TIGR01509       154 GLKPEECLFVDDSP-AGIEAAKAAGMHTVLV  183 (183)
T ss_pred             CCCcceEEEEcCCH-HHHHHHHHcCCEEEeC
Confidence            99999999999999 7999999999999986

HAD subfamilies caused by an overly broad single model.

>PRK10444 UMP phosphatase; Provisional

Probab=99.30  E-value=2.3e-11  Score=115.74  Aligned_cols=112  Identities=20%  Similarity=0.184  Sum_probs=86.2

Q ss_pred             CEEEEcCCceeecCCCCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCC--CccHHHHHHHHHHhCCeEEEcccCCCch
Q 017982          184 KGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEY--DNDASKARKLEGKIGIKVIRHRVKKPAG  261 (363)
Q Consensus       184 kaVV~DlDnTL~~~~~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~--dp~~~~a~~i~~~LGi~~I~~~~kKP~p  261 (363)
                      .+|+++.|.+++       |+.+..+...++  .| ..+|+||.+...+.  ...+..+..+....|...+.  .+||++
T Consensus       110 ~~Vvvg~~~~~~-------~~~l~~a~~~l~--~g-~~~i~~n~D~~~~g~~~~~G~~~~~l~~~~g~~~~~--~gKP~~  177 (248)
T PRK10444        110 DFVIVGETRSYN-------WDMMHKAAYFVA--NG-ARFIATNPDTHGRGFYPACGALCAGIEKISGRKPFY--VGKPSP  177 (248)
T ss_pred             CEEEEeCCCCCC-------HHHHHHHHHHHH--CC-CEEEEECCCCCCCCCcCcHHHHHHHHHHHhCCCccc--cCCCCH
Confidence            467666665443       556666666664  25 67999998865432  12367778888888886543  479999


Q ss_pred             -hHHHHHHHhCCCCCcEEEEccCCcccHHHHHHcCCeEEEEcCCCCC
Q 017982          262 -TAEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGFLTILTEPLSLA  307 (363)
Q Consensus       262 -~~~~alk~lgl~pee~vmVGDrL~TDI~~A~raGi~TIlV~p~~~~  307 (363)
                       .++.+++.+++++++++||||++.|||.+|+++|+.+++|..+..+
T Consensus       178 ~~~~~~~~~~~~~~~~~v~IGD~~~tDi~~A~~~G~~~vlV~~G~~~  224 (248)
T PRK10444        178 WIIRAALNKMQAHSEETVIVGDNLRTDILAGFQAGLETILVLSGVST  224 (248)
T ss_pred             HHHHHHHHHcCCCcccEEEECCCcHHHHHHHHHcCCCEEEECCCCCC
Confidence             5689999999999999999999989999999999999999877655

>PRK13288 pyrophosphatase PpaX; Provisional

Probab=99.30  E-value=1.2e-11  Score=112.98  Aligned_cols=96  Identities=17%  Similarity=0.197  Sum_probs=81.0

Q ss_pred             CCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCeE----EE----cccCCCch-hHHHHHHHh
Q 017982          200 LTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKV----IR----HRVKKPAG-TAEEIEKHF  270 (363)
Q Consensus       200 ~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~~----I~----~~~kKP~p-~~~~alk~l  270 (363)
                      ..++|++.++|+.|+ +.|++++|+||+.        ...+..+++.+|+..    +.    ....||.+ .+.++++++
T Consensus        81 ~~~~~g~~~~l~~L~-~~g~~~~i~S~~~--------~~~~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~p~~~~~~~~~~  151 (214)
T PRK13288         81 VTEYETVYETLKTLK-KQGYKLGIVTTKM--------RDTVEMGLKLTGLDEFFDVVITLDDVEHAKPDPEPVLKALELL  151 (214)
T ss_pred             cccCcCHHHHHHHHH-HCCCeEEEEeCCC--------HHHHHHHHHHcCChhceeEEEecCcCCCCCCCcHHHHHHHHHc
Confidence            347899999999998 5799999999996        356777888888862    21    13479998 578999999


Q ss_pred             CCCCCcEEEEccCCcccHHHHHHcCCeEEEEcCCC
Q 017982          271 GCQSSQLIMVGDRPFTDIVYGNRNGFLTILTEPLS  305 (363)
Q Consensus       271 gl~pee~vmVGDrL~TDI~~A~raGi~TIlV~p~~  305 (363)
                      +++|++++||||+. .||.+|+++|+.+|+|..+.
T Consensus       152 ~~~~~~~~~iGDs~-~Di~aa~~aG~~~i~v~~g~  185 (214)
T PRK13288        152 GAKPEEALMVGDNH-HDILAGKNAGTKTAGVAWTI  185 (214)
T ss_pred             CCCHHHEEEECCCH-HHHHHHHHCCCeEEEEcCCC
Confidence            99999999999998 89999999999999997554

>COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only]

Probab=99.30  E-value=1.3e-11  Score=115.04  Aligned_cols=94  Identities=20%  Similarity=0.206  Sum_probs=80.3

Q ss_pred             CcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCeEE-----E---cccCCCch-hHHHHHHHhC
Q 017982          201 TLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKVI-----R---HRVKKPAG-TAEEIEKHFG  271 (363)
Q Consensus       201 ~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~~I-----~---~~~kKP~p-~~~~alk~lg  271 (363)
                      .+.|++.++|..|+ ..|+.++++||+.        ...++.++..+|+...     .   ....||+| .|..++++||
T Consensus        86 ~~~pGv~~~l~~L~-~~~i~~avaS~s~--------~~~~~~~L~~~gl~~~f~~~v~~~dv~~~KP~Pd~yL~Aa~~Lg  156 (221)
T COG0637          86 KPIPGVVELLEQLK-ARGIPLAVASSSP--------RRAAERVLARLGLLDYFDVIVTADDVARGKPAPDIYLLAAERLG  156 (221)
T ss_pred             CCCccHHHHHHHHH-hcCCcEEEecCCh--------HHHHHHHHHHccChhhcchhccHHHHhcCCCCCHHHHHHHHHcC
Confidence            46789999999998 5789999999996        3678888888887521     1   23569999 6899999999


Q ss_pred             CCCCcEEEEccCCcccHHHHHHcCCeEEEEcCC
Q 017982          272 CQSSQLIMVGDRPFTDIVYGNRNGFLTILTEPL  304 (363)
Q Consensus       272 l~pee~vmVGDrL~TDI~~A~raGi~TIlV~p~  304 (363)
                      ++|++|++|.|+. ..|++|+++||.+|.|...
T Consensus       157 v~P~~CvviEDs~-~Gi~Aa~aAGm~vv~v~~~  188 (221)
T COG0637         157 VDPEECVVVEDSP-AGIQAAKAAGMRVVGVPAG  188 (221)
T ss_pred             CChHHeEEEecch-hHHHHHHHCCCEEEEecCC
Confidence            9999999999999 8999999999999999863

>TIGR01990 bPGM beta-phosphoglucomutase

Probab=99.30  E-value=5.5e-12  Score=111.66  Aligned_cols=90  Identities=19%  Similarity=0.186  Sum_probs=74.7

Q ss_pred             CcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCe----EEE----cccCCCch-hHHHHHHHhC
Q 017982          201 TLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK----VIR----HRVKKPAG-TAEEIEKHFG  271 (363)
Q Consensus       201 ~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~----~I~----~~~kKP~p-~~~~alk~lg  271 (363)
                      .++|++.++|+.|+ +.|++++|+||+..          ...+++.+|+.    .+.    .+..||.+ .+..++++++
T Consensus        87 ~~~pg~~~~L~~L~-~~g~~~~i~s~~~~----------~~~~l~~~~l~~~f~~~~~~~~~~~~kp~p~~~~~~~~~~~  155 (185)
T TIGR01990        87 DVLPGIKNLLDDLK-KNNIKIALASASKN----------APTVLEKLGLIDYFDAIVDPAEIKKGKPDPEIFLAAAEGLG  155 (185)
T ss_pred             ccCccHHHHHHHHH-HCCCeEEEEeCCcc----------HHHHHHhcCcHhhCcEEEehhhcCCCCCChHHHHHHHHHcC
Confidence            57899999999998 57999999999741          23456777764    222    24579999 5799999999


Q ss_pred             CCCCcEEEEccCCcccHHHHHHcCCeEEEEc
Q 017982          272 CQSSQLIMVGDRPFTDIVYGNRNGFLTILTE  302 (363)
Q Consensus       272 l~pee~vmVGDrL~TDI~~A~raGi~TIlV~  302 (363)
                      ++|++++||||+. .||.+|+++||.+|+|.
T Consensus       156 ~~~~~~v~vgD~~-~di~aA~~aG~~~i~v~  185 (185)
T TIGR01990       156 VSPSECIGIEDAQ-AGIEAIKAAGMFAVGVG  185 (185)
T ss_pred             CCHHHeEEEecCH-HHHHHHHHcCCEEEecC
Confidence            9999999999997 89999999999999873

The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.

>PRK13226 phosphoglycolate phosphatase; Provisional

Probab=99.29  E-value=1.1e-11  Score=115.36  Aligned_cols=95  Identities=17%  Similarity=0.230  Sum_probs=79.5

Q ss_pred             CCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCe----EEE----cccCCCch-hHHHHHHHh
Q 017982          200 LTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK----VIR----HRVKKPAG-TAEEIEKHF  270 (363)
Q Consensus       200 ~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~----~I~----~~~kKP~p-~~~~alk~l  270 (363)
                      ..++|++.+.|+.|+ +.|++++|+||+.        ...+..+++.+|+.    ++.    ....||+| .+..+++++
T Consensus        94 ~~~~pg~~~~L~~L~-~~g~~l~i~Tn~~--------~~~~~~~l~~~~l~~~f~~i~~~~~~~~~KP~p~~~~~~~~~l  164 (229)
T PRK13226         94 SQLFDGVEGMLQRLE-CAGCVWGIVTNKP--------EYLARLILPQLGWEQRCAVLIGGDTLAERKPHPLPLLVAAERI  164 (229)
T ss_pred             CeeCCCHHHHHHHHH-HCCCeEEEECCCC--------HHHHHHHHHHcCchhcccEEEecCcCCCCCCCHHHHHHHHHHh
Confidence            357899999999998 5799999999996        35556677777764    222    23579999 578999999


Q ss_pred             CCCCCcEEEEccCCcccHHHHHHcCCeEEEEcCC
Q 017982          271 GCQSSQLIMVGDRPFTDIVYGNRNGFLTILTEPL  304 (363)
Q Consensus       271 gl~pee~vmVGDrL~TDI~~A~raGi~TIlV~p~  304 (363)
                      |++|++++||||+. .||.+|+++|+.+|+|.-+
T Consensus       165 ~~~p~~~l~IGDs~-~Di~aA~~aG~~~i~v~~g  197 (229)
T PRK13226        165 GVAPTDCVYVGDDE-RDILAARAAGMPSVAALWG  197 (229)
T ss_pred             CCChhhEEEeCCCH-HHHHHHHHCCCcEEEEeec
Confidence            99999999999998 8999999999999999644

>PRK09456 ?-D-glucose-1-phosphatase; Provisional

Probab=99.28  E-value=2e-11  Score=110.80  Aligned_cols=94  Identities=17%  Similarity=0.238  Sum_probs=73.5

Q ss_pred             CcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHH-hCC----eEEE----cccCCCch-hHHHHHHHh
Q 017982          201 TLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGK-IGI----KVIR----HRVKKPAG-TAEEIEKHF  270 (363)
Q Consensus       201 ~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~-LGi----~~I~----~~~kKP~p-~~~~alk~l  270 (363)
                      .++|++.++|+.|+ +.|++++|+||+..        ..+..+... .++    +.+.    .+..||+| .|..+++++
T Consensus        84 ~~~~g~~e~L~~l~-~~g~~~~i~Sn~~~--------~~~~~~~~~~~~l~~~fd~v~~s~~~~~~KP~p~~~~~~~~~~  154 (199)
T PRK09456         84 ALRPEVIAIMHKLR-EQGHRVVVLSNTNR--------LHTTFWPEEYPEVRAAADHIYLSQDLGMRKPEARIYQHVLQAE  154 (199)
T ss_pred             ccCHHHHHHHHHHH-hCCCcEEEEcCCch--------hhHHHHHhhchhHHHhcCEEEEecccCCCCCCHHHHHHHHHHc
Confidence            36899999999998 57999999999962        222222111 122    2221    35679999 679999999


Q ss_pred             CCCCCcEEEEccCCcccHHHHHHcCCeEEEEcCC
Q 017982          271 GCQSSQLIMVGDRPFTDIVYGNRNGFLTILTEPL  304 (363)
Q Consensus       271 gl~pee~vmVGDrL~TDI~~A~raGi~TIlV~p~  304 (363)
                      |++|++++||||+. +||.+|+++|+.+|++...
T Consensus       155 ~~~p~~~l~vgD~~-~di~aA~~aG~~~i~~~~~  187 (199)
T PRK09456        155 GFSAADAVFFDDNA-DNIEAANALGITSILVTDK  187 (199)
T ss_pred             CCChhHeEEeCCCH-HHHHHHHHcCCEEEEecCC
Confidence            99999999999998 7999999999999999764

>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC

Probab=99.27  E-value=2e-11  Score=104.72  Aligned_cols=101  Identities=21%  Similarity=0.173  Sum_probs=75.6

Q ss_pred             CEEEEcCCceeecCC---CC--------CcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhC----
Q 017982          184 KGVVFDKDNTLTAPY---SL--------TLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIG----  248 (363)
Q Consensus       184 kaVV~DlDnTL~~~~---~~--------~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LG----  248 (363)
                      |++++|+||||..+.   ..        .++|++.++|+.|+ +.|++++|+||+..       ...+..+++.++    
T Consensus         1 kli~~DlD~Tl~~~~~~~~~~~~~~~~~~~~~gv~e~L~~Lk-~~g~~l~i~Sn~~~-------~~~~~~~l~~~~~~~~   72 (128)
T TIGR01681         1 KVIVFDLDNTLWTGENIVVGEDPIIDLEVTIKEIRDKLQTLK-KNGFLLALASYNDD-------PHVAYELLKIFEDFGI   72 (128)
T ss_pred             CEEEEeCCCCCCCCCcccccCCcchhhHHHHHHHHHHHHHHH-HCCeEEEEEeCCCC-------HHHHHHHHHhcccccc
Confidence            578999999998762   12        26899999999998 57999999999931       244555666666    


Q ss_pred             ---Ce----EEEcccCCCch-hHHHHHHHhC--CCCCcEEEEccCCcccHHHHHH
Q 017982          249 ---IK----VIRHRVKKPAG-TAEEIEKHFG--CQSSQLIMVGDRPFTDIVYGNR  293 (363)
Q Consensus       249 ---i~----~I~~~~kKP~p-~~~~alk~lg--l~pee~vmVGDrL~TDI~~A~r  293 (363)
                         +.    .+..+..+|.+ .+..+++++|  +.|++|+||||+. .|+...++
T Consensus        73 i~~l~~~f~~~~~~~~~pkp~~~~~a~~~lg~~~~p~~~l~igDs~-~n~~~~~~  126 (128)
T TIGR01681        73 IFPLAEYFDPLTIGYWLPKSPRLVEIALKLNGVLKPKSILFVDDRP-DNNEEVDY  126 (128)
T ss_pred             chhhHhhhhhhhhcCCCcHHHHHHHHHHHhcCCCCcceEEEECCCH-hHHHHHHh
Confidence               32    12122246777 5789999999  9999999999999 67766543

No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.

>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254

Probab=99.27  E-value=2e-11  Score=110.99  Aligned_cols=96  Identities=19%  Similarity=0.177  Sum_probs=79.6

Q ss_pred             CCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCe----EEE----cccCCCch-hHHHHHHHh
Q 017982          200 LTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK----VIR----HRVKKPAG-TAEEIEKHF  270 (363)
Q Consensus       200 ~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~----~I~----~~~kKP~p-~~~~alk~l  270 (363)
                      ..++|++.++|++|++ . ++++|+||+.        ...+..+++.+|+.    .+.    .+..||++ .+..+++++
T Consensus        96 ~~~~~g~~~~L~~l~~-~-~~~~i~Sn~~--------~~~~~~~l~~~~l~~~fd~i~~~~~~~~~KP~~~~~~~~~~~~  165 (224)
T TIGR02254        96 HQLLPGAFELMENLQQ-K-FRLYIVTNGV--------RETQYKRLRKSGLFPFFDDIFVSEDAGIQKPDKEIFNYALERM  165 (224)
T ss_pred             CeeCccHHHHHHHHHh-c-CcEEEEeCCc--------hHHHHHHHHHCCcHhhcCEEEEcCccCCCCCCHHHHHHHHHHh
Confidence            3578999999999984 5 8999999996        35666777888874    222    24569999 579999999


Q ss_pred             -CCCCCcEEEEccCCcccHHHHHHcCCeEEEEcCCC
Q 017982          271 -GCQSSQLIMVGDRPFTDIVYGNRNGFLTILTEPLS  305 (363)
Q Consensus       271 -gl~pee~vmVGDrL~TDI~~A~raGi~TIlV~p~~  305 (363)
                       |++|++++||||+...||.+|+++|+.+|++..+.
T Consensus       166 ~~~~~~~~v~igD~~~~di~~A~~~G~~~i~~~~~~  201 (224)
T TIGR02254       166 PKFSKEEVLMIGDSLTADIKGGQNAGLDTCWMNPDM  201 (224)
T ss_pred             cCCCchheEEECCCcHHHHHHHHHCCCcEEEECCCC
Confidence             99999999999998569999999999999998543

This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.

>PRK10748 flavin mononucleotide phosphatase; Provisional

Probab=99.26  E-value=1.4e-11  Score=115.40  Aligned_cols=91  Identities=15%  Similarity=0.232  Sum_probs=73.9

Q ss_pred             CCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCe----EEE----cccCCCch-hHHHHHHHh
Q 017982          200 LTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK----VIR----HRVKKPAG-TAEEIEKHF  270 (363)
Q Consensus       200 ~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~----~I~----~~~kKP~p-~~~~alk~l  270 (363)
                      ..++|++.++|+.|++  +++++|+||+..         .    .+.+|+.    .+.    ....||++ .+..+++++
T Consensus       112 ~~~~~gv~~~L~~L~~--~~~l~i~Tn~~~---------~----~~~~gl~~~fd~i~~~~~~~~~KP~p~~~~~a~~~~  176 (238)
T PRK10748        112 IDVPQATHDTLKQLAK--KWPLVAITNGNA---------Q----PELFGLGDYFEFVLRAGPHGRSKPFSDMYHLAAEKL  176 (238)
T ss_pred             CCCCccHHHHHHHHHc--CCCEEEEECCCc---------h----HHHCCcHHhhceeEecccCCcCCCcHHHHHHHHHHc
Confidence            5678999999999983  589999999852         1    1345553    222    24579999 678999999


Q ss_pred             CCCCCcEEEEccCCcccHHHHHHcCCeEEEEcCCC
Q 017982          271 GCQSSQLIMVGDRPFTDIVYGNRNGFLTILTEPLS  305 (363)
Q Consensus       271 gl~pee~vmVGDrL~TDI~~A~raGi~TIlV~p~~  305 (363)
                      |++|++++||||++.+||.+|+++||.+|||.+..
T Consensus       177 ~~~~~~~~~VGD~~~~Di~~A~~aG~~~i~v~~~~  211 (238)
T PRK10748        177 NVPIGEILHVGDDLTTDVAGAIRCGMQACWINPEN  211 (238)
T ss_pred             CCChhHEEEEcCCcHHHHHHHHHCCCeEEEEcCCC
Confidence            99999999999997689999999999999998654

>PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin []

Probab=99.25  E-value=2.1e-11  Score=108.93  Aligned_cols=113  Identities=19%  Similarity=0.234  Sum_probs=80.2

Q ss_pred             CEEEEcCCceeecC----------CCCCc-chhHHHHHHHHHHhCCCeEEEEeCCCCCCCC--Cc----cHHHHHHHHHH
Q 017982          184 KGVVFDKDNTLTAP----------YSLTL-WGPLSSSIEQCKSVFGHDIAVFSNSAGLYEY--DN----DASKARKLEGK  246 (363)
Q Consensus       184 kaVV~DlDnTL~~~----------~~~~~-~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~--dp----~~~~a~~i~~~  246 (363)
                      |++.||+|+||+..          ..+.. ++++.+.|++|. +.|+.|+|+||..|....  ..    ...++..+++.
T Consensus         1 Kia~fD~DgTLi~~~s~~~f~~~~~D~~~~~~~v~~~L~~l~-~~Gy~IvIvTNQ~gi~~~~~~~~~~~~~~ki~~il~~   79 (159)
T PF08645_consen    1 KIAFFDLDGTLIKTKSGKKFPKDPDDWKFFPPGVPEALRELH-KKGYKIVIVTNQSGIGRGMGEKDLENFHEKIENILKE   79 (159)
T ss_dssp             SEEEE-SCTTTEE-STSTTS-SSTCGGEEC-TTHHHHHHHHH-HTTEEEEEEEE-CCCCCTBTCCHHHHHHHHHHHHHHH
T ss_pred             CEEEEeCCCCccCCCCCCcCcCCHHHhhhcchhHHHHHHHHH-hcCCeEEEEeCccccccccccchHHHHHHHHHHHHHH
Confidence            57889999999752          22334 458999999998 689999999999987651  11    13566788889


Q ss_pred             hCCeEEE------cccCCCchhH-HHHHHHhC----CCCCcEEEEccC----------CcccHHHHHHcCCe
Q 017982          247 IGIKVIR------HRVKKPAGTA-EEIEKHFG----CQSSQLIMVGDR----------PFTDIVYGNRNGFL  297 (363)
Q Consensus       247 LGi~~I~------~~~kKP~p~~-~~alk~lg----l~pee~vmVGDr----------L~TDI~~A~raGi~  297 (363)
                      +++++..      ..++||.++| +.+++.++    ++.++++||||.          -.+|..+|.+.|+.
T Consensus        80 l~ip~~~~~a~~~d~~RKP~~GM~~~~~~~~~~~~~id~~~Sf~VGDaagr~~~~~d~s~~D~~fA~N~gi~  151 (159)
T PF08645_consen   80 LGIPIQVYAAPHKDPCRKPNPGMWEFALKDYNDGVEIDLANSFYVGDAAGRSKKKKDFSDSDRKFALNCGIK  151 (159)
T ss_dssp             CTS-EEEEECGCSSTTSTTSSHHHHHHCCCTSTT--S-CCC-EEEESSCHCTB-S--S--HHHHHHHHHT--
T ss_pred             cCCceEEEecCCCCCCCCCchhHHHHHHHhccccccccccceEEEeccCCCCCcccccChhHHHHHHHcCCc
Confidence            9999532      2589999976 77887776    499999999995          24799999999997

; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A ....

>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458

Probab=99.25  E-value=7.3e-11  Score=112.47  Aligned_cols=112  Identities=17%  Similarity=0.154  Sum_probs=85.8

Q ss_pred             CEEEEcCCc-eeecCCCCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCC-----ccHHHHHHHHHHhCCeEEEcccC
Q 017982          184 KGVVFDKDN-TLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYD-----NDASKARKLEGKIGIKVIRHRVK  257 (363)
Q Consensus       184 kaVV~DlDn-TL~~~~~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~d-----p~~~~a~~i~~~LGi~~I~~~~k  257 (363)
                      .+|+++.|. ++       .++++.++++.|+ ..|++++|+||.+..++..     ..+..+..+....+...+.  .+
T Consensus       109 ~~Vv~g~~~~~~-------~y~~l~~a~~~L~-~~~~~~~iatn~~~~~~~~~~~~~g~g~~~~~i~~~~~~~~~~--~g  178 (257)
T TIGR01458       109 NCVVMGLAPEHF-------SYQILNQAFRLLL-DGAKPLLIAIGKGRYYKRKDGLALDVGPFVTALEYATDTKATV--VG  178 (257)
T ss_pred             CEEEEecccCcc-------CHHHHHHHHHHHH-cCCCCEEEEeCCCCCCcCCCCCCCCchHHHHHHHHHhCCCcee--ec
Confidence            456666543 33       2688889999987 4678899999998654311     1244555666666766543  47


Q ss_pred             CCch-hHHHHHHHhCCCCCcEEEEccCCcccHHHHHHcCCeEEEEcCCC
Q 017982          258 KPAG-TAEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGFLTILTEPLS  305 (363)
Q Consensus       258 KP~p-~~~~alk~lgl~pee~vmVGDrL~TDI~~A~raGi~TIlV~p~~  305 (363)
                      ||++ .++.++++++++|++++||||++.+||.+|+++|+.+|+|..+.
T Consensus       179 KP~p~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~~G~~~i~v~~G~  227 (257)
T TIGR01458       179 KPSKTFFLEALRATGCEPEEAVMIGDDCRDDVGGAQDCGMRGIQVRTGK  227 (257)
T ss_pred             CCCHHHHHHHHHHhCCChhhEEEECCCcHHHHHHHHHcCCeEEEECCCC
Confidence            9999 56899999999999999999998899999999999999998664

This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.

>PHA02530 pseT polynucleotide kinase; Provisional

Probab=99.24  E-value=5.7e-11  Score=114.07  Aligned_cols=112  Identities=22%  Similarity=0.135  Sum_probs=88.0

Q ss_pred             CCEEEEcCCceeecCC-----------CCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCeE
Q 017982          183 FKGVVFDKDNTLTAPY-----------SLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKV  251 (363)
Q Consensus       183 IkaVV~DlDnTL~~~~-----------~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~~  251 (363)
                      .+++++|+|+|+....           ...++|++.++|++|+ +.|++++|+||++.        ...+.+++.+++.-
T Consensus       158 ~~~~~~D~dgtl~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~-~~g~~i~i~T~r~~--------~~~~~~l~~l~~~~  228 (300)
T PHA02530        158 PKAVIFDIDGTLAKMGGRSPYDWTKVKEDKPNPMVVELVKMYK-AAGYEIIVVSGRDG--------VCEEDTVEWLRQTD  228 (300)
T ss_pred             CCEEEEECCCcCcCCCCCCccchhhcccCCCChhHHHHHHHHH-hCCCEEEEEeCCCh--------hhHHHHHHHHHHcC
Confidence            5789999999997522           2467999999999998 57999999999973        34455555555441


Q ss_pred             -----EE-----------cccCCCch-hHHHHHHHhCC-CCCcEEEEccCCcccHHHHHHcCCeEEEEcCC
Q 017982          252 -----IR-----------HRVKKPAG-TAEEIEKHFGC-QSSQLIMVGDRPFTDIVYGNRNGFLTILTEPL  304 (363)
Q Consensus       252 -----I~-----------~~~kKP~p-~~~~alk~lgl-~pee~vmVGDrL~TDI~~A~raGi~TIlV~p~  304 (363)
                           +.           ...+||++ ...+++++++. ++++++||||+. +||.+|+++|+.+|+|..+
T Consensus       229 ~~f~~i~~~~~~~~~~~~~~~~kp~p~~~~~~l~~~~~~~~~~~~~vgD~~-~d~~~a~~~Gi~~i~v~~g  298 (300)
T PHA02530        229 IWFDDLIGRPPDMHFQREQGDKRPDDVVKEEIFWEKIAPKYDVLLAVDDRD-QVVDMWRRIGLECWQVAPG  298 (300)
T ss_pred             CchhhhhCCcchhhhcccCCCCCCcHHHHHHHHHHHhccCceEEEEEcCcH-HHHHHHHHhCCeEEEecCC
Confidence                 10           12469998 45889998888 679999999999 7999999999999999654

>PRK14988 GMP/IMP nucleotidase; Provisional

Probab=99.24  E-value=3.3e-11  Score=112.33  Aligned_cols=96  Identities=11%  Similarity=0.109  Sum_probs=77.9

Q ss_pred             CCCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCe----EEE----cccCCCch-hHHHHHH
Q 017982          198 YSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK----VIR----HRVKKPAG-TAEEIEK  268 (363)
Q Consensus       198 ~~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~----~I~----~~~kKP~p-~~~~alk  268 (363)
                      ....++|++.+.|+.|+ +.|++++|+||+.        ...+...++.+|+.    .+.    .+..||+| .+..+++
T Consensus        90 ~~~~~~~g~~e~L~~Lk-~~g~~~~i~Tn~~--------~~~~~~~l~~~~l~~~fd~iv~s~~~~~~KP~p~~~~~~~~  160 (224)
T PRK14988         90 PRAVLREDTVPFLEALK-ASGKRRILLTNAH--------PHNLAVKLEHTGLDAHLDLLLSTHTFGYPKEDQRLWQAVAE  160 (224)
T ss_pred             ccCCcCCCHHHHHHHHH-hCCCeEEEEeCcC--------HHHHHHHHHHCCcHHHCCEEEEeeeCCCCCCCHHHHHHHHH
Confidence            34567899999999998 5799999999985        24556666777763    222    34679999 6799999


Q ss_pred             HhCCCCCcEEEEccCCcccHHHHHHcCCeE-EEEcC
Q 017982          269 HFGCQSSQLIMVGDRPFTDIVYGNRNGFLT-ILTEP  303 (363)
Q Consensus       269 ~lgl~pee~vmVGDrL~TDI~~A~raGi~T-IlV~p  303 (363)
                      ++|++|++|+||||+. .||++|+++||.+ +.|..
T Consensus       161 ~~~~~p~~~l~igDs~-~di~aA~~aG~~~~~~v~~  195 (224)
T PRK14988        161 HTGLKAERTLFIDDSE-PILDAAAQFGIRYCLGVTN  195 (224)
T ss_pred             HcCCChHHEEEEcCCH-HHHHHHHHcCCeEEEEEeC
Confidence            9999999999999998 7999999999985 56753

>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase

Probab=99.24  E-value=2.2e-11  Score=107.81  Aligned_cols=90  Identities=16%  Similarity=0.227  Sum_probs=75.4

Q ss_pred             CCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCe----EEE----cccCCCch-hHHHHHHHh
Q 017982          200 LTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK----VIR----HRVKKPAG-TAEEIEKHF  270 (363)
Q Consensus       200 ~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~----~I~----~~~kKP~p-~~~~alk~l  270 (363)
                      ..++|++.+.|+.|+ +.|++++|+||+.          .++.+++.+|+.    .+.    ....||.+ .+..+++++
T Consensus        87 ~~~~~g~~~~l~~l~-~~g~~i~i~S~~~----------~~~~~l~~~~l~~~f~~v~~~~~~~~~kp~~~~~~~~~~~~  155 (185)
T TIGR02009        87 AEVLPGIENFLKRLK-KKGIAVGLGSSSK----------NADRILAKLGLTDYFDAIVDADEVKEGKPHPETFLLAAELL  155 (185)
T ss_pred             CCCCcCHHHHHHHHH-HcCCeEEEEeCch----------hHHHHHHHcChHHHCCEeeehhhCCCCCCChHHHHHHHHHc
Confidence            567999999999998 5799999999982          356667777764    232    23579998 578999999


Q ss_pred             CCCCCcEEEEccCCcccHHHHHHcCCeEEEE
Q 017982          271 GCQSSQLIMVGDRPFTDIVYGNRNGFLTILT  301 (363)
Q Consensus       271 gl~pee~vmVGDrL~TDI~~A~raGi~TIlV  301 (363)
                      |+++++++||||+. .||.+|+++|+.+|.|
T Consensus       156 ~~~~~~~v~IgD~~-~di~aA~~~G~~~i~v  185 (185)
T TIGR02009       156 GVSPNECVVFEDAL-AGVQAARAAGMFAVAV  185 (185)
T ss_pred             CCCHHHeEEEeCcH-hhHHHHHHCCCeEeeC
Confidence            99999999999997 8999999999999976

All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).

>PRK13478 phosphonoacetaldehyde hydrolase; Provisional

Probab=99.23  E-value=4.2e-11  Score=113.78  Aligned_cols=96  Identities=14%  Similarity=0.032  Sum_probs=77.6

Q ss_pred             CCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCC-----eEEE----cccCCCch-hHHHHHHH
Q 017982          200 LTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGI-----KVIR----HRVKKPAG-TAEEIEKH  269 (363)
Q Consensus       200 ~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi-----~~I~----~~~kKP~p-~~~~alk~  269 (363)
                      ..++|++.+.|+.|+ +.|++++|+||+.        ...+..+++.+++     +.|.    ....||+| .+..++++
T Consensus       100 ~~~~pg~~elL~~L~-~~g~~l~I~T~~~--------~~~~~~~l~~~~l~~~~~d~i~~~~~~~~~KP~p~~~~~a~~~  170 (267)
T PRK13478        100 ATPIPGVLEVIAALR-ARGIKIGSTTGYT--------REMMDVVVPLAAAQGYRPDHVVTTDDVPAGRPYPWMALKNAIE  170 (267)
T ss_pred             CCCCCCHHHHHHHHH-HCCCEEEEEcCCc--------HHHHHHHHHHHhhcCCCceEEEcCCcCCCCCCChHHHHHHHHH
Confidence            457899999999998 5799999999996        2445556565443     2332    23579999 57899999


Q ss_pred             hCCC-CCcEEEEccCCcccHHHHHHcCCeEEEEcCCC
Q 017982          270 FGCQ-SSQLIMVGDRPFTDIVYGNRNGFLTILTEPLS  305 (363)
Q Consensus       270 lgl~-pee~vmVGDrL~TDI~~A~raGi~TIlV~p~~  305 (363)
                      +|+. +++++||||+. +||.+|+++|+.+|+|..+.
T Consensus       171 l~~~~~~e~l~IGDs~-~Di~aA~~aG~~~i~v~~g~  206 (267)
T PRK13478        171 LGVYDVAACVKVDDTV-PGIEEGLNAGMWTVGVILSG  206 (267)
T ss_pred             cCCCCCcceEEEcCcH-HHHHHHHHCCCEEEEEccCc
Confidence            9996 69999999999 89999999999999998654

>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase

Probab=99.23  E-value=5.1e-11  Score=108.50  Aligned_cols=98  Identities=14%  Similarity=0.154  Sum_probs=73.9

Q ss_pred             CCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCC----eEEE----cccCCCch-hHHHHHHH
Q 017982          199 SLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGI----KVIR----HRVKKPAG-TAEEIEKH  269 (363)
Q Consensus       199 ~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi----~~I~----~~~kKP~p-~~~~alk~  269 (363)
                      ...++|++.++|+.|+ +.|++++|+||+....      .........+++    +.+.    .+..||++ .+..++++
T Consensus        92 ~~~~~~~~~~~L~~L~-~~g~~l~i~Sn~~~~~------~~~~~~~~~~~l~~~fd~v~~s~~~~~~KP~p~~~~~~~~~  164 (211)
T TIGR02247        92 NTKLRPSMMAAIKTLR-AKGFKTACITNNFPTD------HSAEEALLPGDIMALFDAVVESCLEGLRKPDPRIYQLMLER  164 (211)
T ss_pred             ccccChhHHHHHHHHH-HCCCeEEEEeCCCCcc------chhhhHhhhhhhHhhCCEEEEeeecCCCCCCHHHHHHHHHH
Confidence            3457899999999998 5799999999986311      001111112232    2222    24579999 57999999


Q ss_pred             hCCCCCcEEEEccCCcccHHHHHHcCCeEEEEcCC
Q 017982          270 FGCQSSQLIMVGDRPFTDIVYGNRNGFLTILTEPL  304 (363)
Q Consensus       270 lgl~pee~vmVGDrL~TDI~~A~raGi~TIlV~p~  304 (363)
                      +|++|++++||||+. .||.+|+++|+.+|+|.+.
T Consensus       165 ~g~~~~~~l~i~D~~-~di~aA~~aG~~~i~v~~~  198 (211)
T TIGR02247       165 LGVAPEECVFLDDLG-SNLKPAAALGITTIKVSDE  198 (211)
T ss_pred             cCCCHHHeEEEcCCH-HHHHHHHHcCCEEEEECCH
Confidence            999999999999997 8999999999999999753

These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.

>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit

Probab=99.22  E-value=6.6e-11  Score=106.99  Aligned_cols=106  Identities=17%  Similarity=0.253  Sum_probs=83.9

Q ss_pred             CCCEEEEcCCceeecC---CCC--------CcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCe
Q 017982          182 GFKGVVFDKDNTLTAP---YSL--------TLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK  250 (363)
Q Consensus       182 GIkaVV~DlDnTL~~~---~~~--------~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~  250 (363)
                      .+|++|||+|+||+..   +..        ...+  -..++.|+ +.|++++|+||+.        ...++.+++.+|+.
T Consensus         6 ~i~~~v~d~dGv~tdg~~~~~~~g~~~~~~~~~D--~~~~~~L~-~~Gi~laIiT~k~--------~~~~~~~l~~lgi~   74 (169)
T TIGR02726         6 NIKLVILDVDGVMTDGRIVINDEGIESRNFDIKD--GMGVIVLQ-LCGIDVAIITSKK--------SGAVRHRAEELKIK   74 (169)
T ss_pred             cCeEEEEeCceeeECCeEEEcCCCcEEEEEecch--HHHHHHHH-HCCCEEEEEECCC--------cHHHHHHHHHCCCc
Confidence            5899999999999862   111        1122  23577887 5799999999997        36788899999998


Q ss_pred             EEEcccCCCch-hHHHHHHHhCCCCCcEEEEccCCcccHHHHHHcCCeEEE
Q 017982          251 VIRHRVKKPAG-TAEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGFLTIL  300 (363)
Q Consensus       251 ~I~~~~kKP~p-~~~~alk~lgl~pee~vmVGDrL~TDI~~A~raGi~TIl  300 (363)
                      .++.. .||.+ .+..+++++++++++++||||+. +|+.+++.+|+..+-
T Consensus        75 ~~f~~-~kpkp~~~~~~~~~l~~~~~ev~~iGD~~-nDi~~~~~ag~~~am  123 (169)
T TIGR02726        75 RFHEG-IKKKTEPYAQMLEEMNISDAEVCYVGDDL-VDLSMMKRVGLAVAV  123 (169)
T ss_pred             EEEec-CCCCHHHHHHHHHHcCcCHHHEEEECCCH-HHHHHHHHCCCeEEC
Confidence            65433 47777 57899999999999999999998 899999999986443

Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.

>PF13242 Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A 2HX1_D 2X4D_A 3HLT_C 3L1U_B

Probab=99.20  E-value=2.9e-11  Score=94.34  Aligned_cols=54  Identities=33%  Similarity=0.362  Sum_probs=49.4

Q ss_pred             cCCCch-hHHHHHHHhCCCCCcEEEEccCCcccHHHHHHcCCeEEEEcCCCCCCc
Q 017982          256 VKKPAG-TAEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGFLTILTEPLSLAEE  309 (363)
Q Consensus       256 ~kKP~p-~~~~alk~lgl~pee~vmVGDrL~TDI~~A~raGi~TIlV~p~~~~~e  309 (363)
                      ++||++ .+..+++++++++++++||||++.|||.+|+++|+.+|+|..+....+
T Consensus         2 ~gKP~p~~~~~a~~~~~~~~~~~~~VGD~~~~Di~~a~~~G~~~ilV~tG~~~~~   56 (75)
T PF13242_consen    2 CGKPSPGMLEQALKRLGVDPSRCVMVGDSLETDIEAAKAAGIDTILVLTGVYSPE   56 (75)
T ss_dssp             CSTTSHHHHHHHHHHHTSGGGGEEEEESSTTTHHHHHHHTTSEEEEESSSSSCCC
T ss_pred             CCCCcHHHHHHHHHHcCCCHHHEEEEcCCcHhHHHHHHHcCCcEEEECCCCCCHH
Confidence            689999 468999999999999999999977999999999999999998876654

...

>PLN02779 haloacid dehalogenase-like hydrolase family protein

Probab=99.20  E-value=8.4e-11  Score=113.80  Aligned_cols=96  Identities=20%  Similarity=0.207  Sum_probs=77.1

Q ss_pred             CCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCC-------eEEE---cccCCCch-hHHHHHH
Q 017982          200 LTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGI-------KVIR---HRVKKPAG-TAEEIEK  268 (363)
Q Consensus       200 ~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi-------~~I~---~~~kKP~p-~~~~alk  268 (363)
                      ..++|++.+.|+.|+ ..|++++|+||+.        ...+..+++.++.       .++.   ....||.| .+..+++
T Consensus       143 ~~l~pGv~elL~~L~-~~g~~l~IvTn~~--------~~~~~~~l~~~~~~~~~~~~~~v~~~~~~~~KP~p~~~~~a~~  213 (286)
T PLN02779        143 LPLRPGVLRLMDEAL-AAGIKVAVCSTSN--------EKAVSKIVNTLLGPERAQGLDVFAGDDVPKKKPDPDIYNLAAE  213 (286)
T ss_pred             CCchhhHHHHHHHHH-HCCCeEEEEeCCC--------HHHHHHHHHHhccccccCceEEEeccccCCCCCCHHHHHHHHH
Confidence            367999999999998 5799999999986        2444555554421       1221   24579999 6789999


Q ss_pred             HhCCCCCcEEEEccCCcccHHHHHHcCCeEEEEcCCC
Q 017982          269 HFGCQSSQLIMVGDRPFTDIVYGNRNGFLTILTEPLS  305 (363)
Q Consensus       269 ~lgl~pee~vmVGDrL~TDI~~A~raGi~TIlV~p~~  305 (363)
                      ++|++|++++||||+. .||.+|+++||.+|+|..+.
T Consensus       214 ~~~~~p~~~l~IGDs~-~Di~aA~~aG~~~i~v~~g~  249 (286)
T PLN02779        214 TLGVDPSRCVVVEDSV-IGLQAAKAAGMRCIVTKSSY  249 (286)
T ss_pred             HhCcChHHEEEEeCCH-HhHHHHHHcCCEEEEEccCC
Confidence            9999999999999998 79999999999999997554

>TIGR01686 FkbH FkbH-like domain

Probab=99.19  E-value=8.9e-11  Score=115.11  Aligned_cols=105  Identities=21%  Similarity=0.196  Sum_probs=84.3

Q ss_pred             CCCEEEEcCCceeecCC--C--------CCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHH----h
Q 017982          182 GFKGVVFDKDNTLTAPY--S--------LTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGK----I  247 (363)
Q Consensus       182 GIkaVV~DlDnTL~~~~--~--------~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~----L  247 (363)
                      -+|++|+|+||||..+-  .        ...++++.++|+.|+ +.|+.++|+||++        ...+..+++.    +
T Consensus         2 ~~k~~v~DlDnTlw~gv~~e~g~~~i~~~~~~~~~~e~L~~L~-~~Gi~lai~S~n~--------~~~a~~~l~~~~~~~   72 (320)
T TIGR01686         2 ALKVLVLDLDNTLWGGVLGEDGIDNLNLSPLHKTLQEKIKTLK-KQGFLLALASKND--------EDDAKKVFERRKDFI   72 (320)
T ss_pred             CeEEEEEcCCCCCCCCEEccCCccccccCccHHHHHHHHHHHH-hCCCEEEEEcCCC--------HHHHHHHHHhCcccc
Confidence            47899999999995421  1        135799999999998 5899999999996        3677777877    7


Q ss_pred             CCe--EEE-cccCCCch-hHHHHHHHhCCCCCcEEEEccCCcccHHHHHHcCC
Q 017982          248 GIK--VIR-HRVKKPAG-TAEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGF  296 (363)
Q Consensus       248 Gi~--~I~-~~~kKP~p-~~~~alk~lgl~pee~vmVGDrL~TDI~~A~raGi  296 (363)
                      ++.  +.. ....||.+ .+..+++++|+.+++++||||+. .|+.++++++-
T Consensus        73 ~~~~~f~~~~~~~~pk~~~i~~~~~~l~i~~~~~vfidD~~-~d~~~~~~~lp  124 (320)
T TIGR01686        73 LQAEDFDARSINWGPKSESLRKIAKKLNLGTDSFLFIDDNP-AERANVKITLP  124 (320)
T ss_pred             CcHHHeeEEEEecCchHHHHHHHHHHhCCCcCcEEEECCCH-HHHHHHHHHCC
Confidence            765  221 23368888 57899999999999999999999 69999998765

The C-terminal portion of this domain is unique to this family (by BLAST).

>TIGR00338 serB phosphoserine phosphatase SerB

Probab=99.19  E-value=1.4e-10  Score=106.07  Aligned_cols=88  Identities=19%  Similarity=0.168  Sum_probs=70.4

Q ss_pred             cchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCeEEEc------------------ccCCCch-h
Q 017982          202 LWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKVIRH------------------RVKKPAG-T  262 (363)
Q Consensus       202 ~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~~I~~------------------~~kKP~p-~  262 (363)
                      ++|++.++|+.|+ +.|++++|+||+.        ...++.+++.+|+..++.                  ...+|.+ .
T Consensus        86 ~~~g~~~~l~~l~-~~g~~~~IvS~~~--------~~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~  156 (219)
T TIGR00338        86 LTEGAEELVKTLK-EKGYKVAVISGGF--------DLFAEHVKDKLGLDAAFANRLEVEDGKLTGLVEGPIVDASYKGKT  156 (219)
T ss_pred             cCCCHHHHHHHHH-HCCCEEEEECCCc--------HHHHHHHHHHcCCCceEeeEEEEECCEEEEEecCcccCCcccHHH
Confidence            5788888999998 5799999999985        366778888888763321                  0123445 4


Q ss_pred             HHHHHHHhCCCCCcEEEEccCCcccHHHHHHcCCeEE
Q 017982          263 AEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGFLTI  299 (363)
Q Consensus       263 ~~~alk~lgl~pee~vmVGDrL~TDI~~A~raGi~TI  299 (363)
                      ++.+++++++++++++||||+. +|+.+|+.+|+..+
T Consensus       157 ~~~~~~~~~~~~~~~i~iGDs~-~Di~aa~~ag~~i~  192 (219)
T TIGR00338       157 LLILLRKEGISPENTVAVGDGA-NDLSMIKAAGLGIA  192 (219)
T ss_pred             HHHHHHHcCCCHHHEEEEECCH-HHHHHHHhCCCeEE
Confidence            6889999999999999999997 89999999999753

Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins.

>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase

Probab=99.17  E-value=7.5e-11  Score=105.38  Aligned_cols=89  Identities=21%  Similarity=0.277  Sum_probs=73.8

Q ss_pred             CCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCe----EEE----ccc----CCCch-hHHHH
Q 017982          200 LTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK----VIR----HRV----KKPAG-TAEEI  266 (363)
Q Consensus       200 ~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~----~I~----~~~----kKP~p-~~~~a  266 (363)
                      ..+++++.++|++|+    ++++|+||+.        ...+..+++.+|+.    .+.    ...    .||+| .+..+
T Consensus        83 ~~~~~g~~~~L~~L~----~~~~i~Tn~~--------~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~KP~p~~~~~~  150 (184)
T TIGR01993        83 LKPDPELRNLLLRLP----GRKIIFTNGD--------RAHARRALNRLGIEDCFDGIFCFDTANPDYLLPKPSPQAYEKA  150 (184)
T ss_pred             CCCCHHHHHHHHhCC----CCEEEEeCCC--------HHHHHHHHHHcCcHhhhCeEEEeecccCccCCCCCCHHHHHHH
Confidence            457899999999886    3799999996        35677888888874    222    122    49999 57999


Q ss_pred             HHHhCCCCCcEEEEccCCcccHHHHHHcCCeEEEE
Q 017982          267 EKHFGCQSSQLIMVGDRPFTDIVYGNRNGFLTILT  301 (363)
Q Consensus       267 lk~lgl~pee~vmVGDrL~TDI~~A~raGi~TIlV  301 (363)
                      ++++|++|++++||||+. .||.+|+++|+.+|+|
T Consensus       151 ~~~~~~~~~~~l~vgD~~-~di~aA~~~G~~~i~v  184 (184)
T TIGR01993       151 LREAGVDPERAIFFDDSA-RNIAAAKALGMKTVLV  184 (184)
T ss_pred             HHHhCCCccceEEEeCCH-HHHHHHHHcCCEEeeC
Confidence            999999999999999998 7999999999999986

These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).

>TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase

Probab=99.16  E-value=1.9e-10  Score=107.94  Aligned_cols=94  Identities=15%  Similarity=0.192  Sum_probs=74.3

Q ss_pred             CCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHh---CCe----EEE--cccCCCch-hHHHHHHH
Q 017982          200 LTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKI---GIK----VIR--HRVKKPAG-TAEEIEKH  269 (363)
Q Consensus       200 ~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~L---Gi~----~I~--~~~kKP~p-~~~~alk~  269 (363)
                      ..++|++.++|++|+ +.|++++|+||+..        ...+.+.+.+   ++.    .++  ....||++ .+..++++
T Consensus        94 ~~lypgv~e~L~~Lk-~~G~~l~I~Sn~s~--------~~~~~~~~~~~~~~L~~~f~~~fd~~~g~KP~p~~y~~i~~~  164 (220)
T TIGR01691        94 SHLYPDVPPALEAWL-QLGLRLAVYSSGSV--------PAQKLLFGHSDAGNLTPYFSGYFDTTVGLKTEAQSYVKIAGQ  164 (220)
T ss_pred             cCcCcCHHHHHHHHH-HCCCEEEEEeCCCH--------HHHHHHHhhccccchhhhcceEEEeCcccCCCHHHHHHHHHH
Confidence            457999999999998 57999999999962        2333444443   221    111  23469999 57999999


Q ss_pred             hCCCCCcEEEEccCCcccHHHHHHcCCeEEEEcC
Q 017982          270 FGCQSSQLIMVGDRPFTDIVYGNRNGFLTILTEP  303 (363)
Q Consensus       270 lgl~pee~vmVGDrL~TDI~~A~raGi~TIlV~p  303 (363)
                      +|++|++++||||+. .|+.+|+++||.+|+|..
T Consensus       165 lgv~p~e~lfVgDs~-~Di~AA~~AG~~ti~v~r  197 (220)
T TIGR01691       165 LGSPPREILFLSDII-NELDAARKAGLHTGQLVR  197 (220)
T ss_pred             hCcChhHEEEEeCCH-HHHHHHHHcCCEEEEEEC
Confidence            999999999999998 899999999999999973

This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities.

>PRK13222 phosphoglycolate phosphatase; Provisional

Probab=99.14  E-value=2.9e-10  Score=103.69  Aligned_cols=97  Identities=21%  Similarity=0.241  Sum_probs=80.7

Q ss_pred             CCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCe----EEE----cccCCCch-hHHHHHHH
Q 017982          199 SLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK----VIR----HRVKKPAG-TAEEIEKH  269 (363)
Q Consensus       199 ~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~----~I~----~~~kKP~p-~~~~alk~  269 (363)
                      ...++|++.++|+.|+ +.|++++|+||+.        ...+..+++.+|+.    .+.    ....||.+ .+..++++
T Consensus        91 ~~~~~~g~~~~l~~l~-~~g~~~~i~S~~~--------~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~  161 (226)
T PRK13222         91 GSRLYPGVKETLAALK-AAGYPLAVVTNKP--------TPFVAPLLEALGIADYFSVVIGGDSLPNKKPDPAPLLLACEK  161 (226)
T ss_pred             cCccCCCHHHHHHHHH-HCCCeEEEEeCCC--------HHHHHHHHHHcCCccCccEEEcCCCCCCCCcChHHHHHHHHH
Confidence            3567899999999998 5799999999996        35566777888874    222    13579988 57899999


Q ss_pred             hCCCCCcEEEEccCCcccHHHHHHcCCeEEEEcCCC
Q 017982          270 FGCQSSQLIMVGDRPFTDIVYGNRNGFLTILTEPLS  305 (363)
Q Consensus       270 lgl~pee~vmVGDrL~TDI~~A~raGi~TIlV~p~~  305 (363)
                      +++++++++||||+. .||.+|+++|+.+|+|..+.
T Consensus       162 ~~~~~~~~i~igD~~-~Di~~a~~~g~~~i~v~~g~  196 (226)
T PRK13222        162 LGLDPEEMLFVGDSR-NDIQAARAAGCPSVGVTYGY  196 (226)
T ss_pred             cCCChhheEEECCCH-HHHHHHHHCCCcEEEECcCC
Confidence            999999999999997 89999999999999998544

>PLN02811 hydrolase

Probab=99.14  E-value=2.9e-10  Score=104.91  Aligned_cols=98  Identities=13%  Similarity=0.169  Sum_probs=73.9

Q ss_pred             CCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCC----eEE-Ec-----ccCCCch-hHHHHH
Q 017982          199 SLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGI----KVI-RH-----RVKKPAG-TAEEIE  267 (363)
Q Consensus       199 ~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi----~~I-~~-----~~kKP~p-~~~~al  267 (363)
                      ...++|++.++|+.|+ +.|++++|+||+..       ......+.+..++    +.+ ..     ...||+| .+..++
T Consensus        76 ~~~l~~gv~e~l~~L~-~~g~~~~i~S~~~~-------~~~~~~~~~~~~l~~~f~~i~~~~~~~~~~~KP~p~~~~~a~  147 (220)
T PLN02811         76 TSDLMPGAERLVRHLH-AKGIPIAIATGSHK-------RHFDLKTQRHGELFSLMHHVVTGDDPEVKQGKPAPDIFLAAA  147 (220)
T ss_pred             hCCCCccHHHHHHHHH-HCCCcEEEEeCCch-------hhHHHHHcccHHHHhhCCEEEECChhhccCCCCCcHHHHHHH
Confidence            3457899999999998 57999999999862       1111122222222    122 21     2469999 678999


Q ss_pred             HHhC---CCCCcEEEEccCCcccHHHHHHcCCeEEEEcCCC
Q 017982          268 KHFG---CQSSQLIMVGDRPFTDIVYGNRNGFLTILTEPLS  305 (363)
Q Consensus       268 k~lg---l~pee~vmVGDrL~TDI~~A~raGi~TIlV~p~~  305 (363)
                      ++++   ++|++|+||||+. .|+.+|+++|+.+|+|....
T Consensus       148 ~~~~~~~~~~~~~v~IgDs~-~di~aA~~aG~~~i~v~~~~  187 (220)
T PLN02811        148 RRFEDGPVDPGKVLVFEDAP-SGVEAAKNAGMSVVMVPDPR  187 (220)
T ss_pred             HHhCCCCCCccceEEEeccH-hhHHHHHHCCCeEEEEeCCC
Confidence            9996   9999999999999 79999999999999997543

>PRK13223 phosphoglycolate phosphatase; Provisional

Probab=99.14  E-value=2.1e-10  Score=110.07  Aligned_cols=95  Identities=20%  Similarity=0.219  Sum_probs=79.2

Q ss_pred             CCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCe----EEE----cccCCCch-hHHHHHHHh
Q 017982          200 LTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK----VIR----HRVKKPAG-TAEEIEKHF  270 (363)
Q Consensus       200 ~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~----~I~----~~~kKP~p-~~~~alk~l  270 (363)
                      ..++|++.+.|+.|+ ..|++++|+||+.        ...++.+++.+|+.    .+.    ...+||.+ .++.+++++
T Consensus       100 ~~~~~g~~e~L~~Lk-~~g~~l~ivTn~~--------~~~~~~~l~~~~i~~~f~~i~~~d~~~~~Kp~p~~~~~~~~~~  170 (272)
T PRK13223        100 TVVYPGVRDTLKWLK-KQGVEMALITNKP--------ERFVAPLLDQMKIGRYFRWIIGGDTLPQKKPDPAALLFVMKMA  170 (272)
T ss_pred             CccCCCHHHHHHHHH-HCCCeEEEEECCc--------HHHHHHHHHHcCcHhhCeEEEecCCCCCCCCCcHHHHHHHHHh
Confidence            457899999999998 5799999999986        24566777777764    222    23579998 578999999


Q ss_pred             CCCCCcEEEEccCCcccHHHHHHcCCeEEEEcCC
Q 017982          271 GCQSSQLIMVGDRPFTDIVYGNRNGFLTILTEPL  304 (363)
Q Consensus       271 gl~pee~vmVGDrL~TDI~~A~raGi~TIlV~p~  304 (363)
                      |+++++++||||+. .||.+|+++|+.+++|..+
T Consensus       171 g~~~~~~l~IGD~~-~Di~aA~~aGi~~i~v~~G  203 (272)
T PRK13223        171 GVPPSQSLFVGDSR-SDVLAAKAAGVQCVALSYG  203 (272)
T ss_pred             CCChhHEEEECCCH-HHHHHHHHCCCeEEEEecC
Confidence            99999999999997 8999999999999999754

>PRK10563 6-phosphogluconate phosphatase; Provisional

Probab=99.13  E-value=1.8e-10  Score=105.55  Aligned_cols=91  Identities=19%  Similarity=0.168  Sum_probs=75.1

Q ss_pred             CCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCe-----EE-E---cccCCCch-hHHHHHH
Q 017982          199 SLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK-----VI-R---HRVKKPAG-TAEEIEK  268 (363)
Q Consensus       199 ~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~-----~I-~---~~~kKP~p-~~~~alk  268 (363)
                      ...++|++.++|+.|    +++++|+||+.        ...+...++.+|+.     .+ .   .+..||++ .+..+++
T Consensus        86 ~~~~~~gv~~~L~~L----~~~~~ivTn~~--------~~~~~~~l~~~~l~~~F~~~v~~~~~~~~~KP~p~~~~~a~~  153 (221)
T PRK10563         86 ELEPIAGANALLESI----TVPMCVVSNGP--------VSKMQHSLGKTGMLHYFPDKLFSGYDIQRWKPDPALMFHAAE  153 (221)
T ss_pred             cCCcCCCHHHHHHHc----CCCEEEEeCCc--------HHHHHHHHHhcChHHhCcceEeeHHhcCCCCCChHHHHHHHH
Confidence            356789999999887    36999999986        35566777777763     22 2   24579999 6799999


Q ss_pred             HhCCCCCcEEEEccCCcccHHHHHHcCCeEEEEc
Q 017982          269 HFGCQSSQLIMVGDRPFTDIVYGNRNGFLTILTE  302 (363)
Q Consensus       269 ~lgl~pee~vmVGDrL~TDI~~A~raGi~TIlV~  302 (363)
                      ++|++|++|+||||+. .||.+|+++|+.+|++.
T Consensus       154 ~~~~~p~~~l~igDs~-~di~aA~~aG~~~i~~~  186 (221)
T PRK10563        154 AMNVNVENCILVDDSS-AGAQSGIAAGMEVFYFC  186 (221)
T ss_pred             HcCCCHHHeEEEeCcH-hhHHHHHHCCCEEEEEC
Confidence            9999999999999999 79999999999999996

>TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase

Probab=99.13  E-value=2.3e-10  Score=119.79  Aligned_cols=113  Identities=19%  Similarity=0.275  Sum_probs=86.8

Q ss_pred             CCCEEEEcCCceeecCC----------CCC-cchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCC--c--cHHHHHHHHHH
Q 017982          182 GFKGVVFDKDNTLTAPY----------SLT-LWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYD--N--DASKARKLEGK  246 (363)
Q Consensus       182 GIkaVV~DlDnTL~~~~----------~~~-~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~d--p--~~~~a~~i~~~  246 (363)
                      -.|+++||+|+||+...          .+. ++|++.+.|+.|+ +.|++++|+||+.+...+.  .  ....+..+++.
T Consensus       167 ~~Kia~fD~DGTLi~t~sg~~~~~~~~d~~~l~pgV~e~L~~L~-~~Gy~IvIvTNQ~gI~~G~~~~~~~~~ki~~iL~~  245 (526)
T TIGR01663       167 QEKIAGFDLDGTIIKTKSGKVFPKGPDDWQIIFPEIPEKLKELE-ADGFKICIFTNQGGIARGKINADDFKAKIEAIVAK  245 (526)
T ss_pred             cCcEEEEECCCCccccCCCccCCCCHHHeeecccCHHHHHHHHH-HCCCEEEEEECCcccccCcccHHHHHHHHHHHHHH
Confidence            45899999999998522          122 5899999999998 6899999999998643211  0  11357788889


Q ss_pred             hCCeEEE------cccCCCchhH-HHHHHHhC----CCCCcEEEEccCCcccHHHHHHcCC
Q 017982          247 IGIKVIR------HRVKKPAGTA-EEIEKHFG----CQSSQLIMVGDRPFTDIVYGNRNGF  296 (363)
Q Consensus       247 LGi~~I~------~~~kKP~p~~-~~alk~lg----l~pee~vmVGDrL~TDI~~A~raGi  296 (363)
                      +|+++..      ..++||.+.| ..++++++    +++++++||||.. .|+.+|+++|-
T Consensus       246 lgipfdviia~~~~~~RKP~pGm~~~a~~~~~~~~~Id~~~S~~VGDaa-gr~~~g~~ag~  305 (526)
T TIGR01663       246 LGVPFQVFIAIGAGFYRKPLTGMWDHLKEEANDGTEIQEDDCFFVGDAA-GRPANGKAAGK  305 (526)
T ss_pred             cCCceEEEEeCCCCCCCCCCHHHHHHHHHhcCcccCCCHHHeEEeCCcc-cchHHHHhcCC
Confidence            9988421      2467999964 78888884    8999999999998 78888887775

Note that the EC number for the kinase function is: 2.7.1.78

>PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional

Probab=99.11  E-value=2.8e-10  Score=101.34  Aligned_cols=90  Identities=18%  Similarity=0.192  Sum_probs=74.1

Q ss_pred             CcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCe----EEE----cccCCCch-hHHHHHHHhC
Q 017982          201 TLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK----VIR----HRVKKPAG-TAEEIEKHFG  271 (363)
Q Consensus       201 ~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~----~I~----~~~kKP~p-~~~~alk~lg  271 (363)
                      .++|+ .+.|..|++  +++++|+||+.        ...+..+++.+|+.    .|.    ....||+| .+..+++++|
T Consensus        88 ~~~~~-~e~L~~L~~--~~~l~I~T~~~--------~~~~~~~l~~~~l~~~fd~i~~~~~~~~~KP~p~~~~~~~~~~~  156 (188)
T PRK10725         88 EPLPL-IEVVKAWHG--RRPMAVGTGSE--------SAIAEALLAHLGLRRYFDAVVAADDVQHHKPAPDTFLRCAQLMG  156 (188)
T ss_pred             CCccH-HHHHHHHHh--CCCEEEEcCCc--------hHHHHHHHHhCCcHhHceEEEehhhccCCCCChHHHHHHHHHcC
Confidence            45664 588989873  47999999996        36677788888874    232    24579999 6799999999


Q ss_pred             CCCCcEEEEccCCcccHHHHHHcCCeEEEEc
Q 017982          272 CQSSQLIMVGDRPFTDIVYGNRNGFLTILTE  302 (363)
Q Consensus       272 l~pee~vmVGDrL~TDI~~A~raGi~TIlV~  302 (363)
                      ++|++++||||+. .||.+|+++|+.+|+|.
T Consensus       157 ~~~~~~l~igDs~-~di~aA~~aG~~~i~~~  186 (188)
T PRK10725        157 VQPTQCVVFEDAD-FGIQAARAAGMDAVDVR  186 (188)
T ss_pred             CCHHHeEEEeccH-hhHHHHHHCCCEEEeec
Confidence            9999999999997 89999999999999985

>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA

Probab=99.09  E-value=1.5e-09  Score=102.06  Aligned_cols=110  Identities=20%  Similarity=0.201  Sum_probs=79.1

Q ss_pred             CCEEEEcCCceeecCCCCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCC-C-----ccHHHHHHHHHHhCCeEEEccc
Q 017982          183 FKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEY-D-----NDASKARKLEGKIGIKVIRHRV  256 (363)
Q Consensus       183 IkaVV~DlDnTL~~~~~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~-d-----p~~~~a~~i~~~LGi~~I~~~~  256 (363)
                      ..+|+++.|.++.+       .....+...++  .|-..+|+||.+...+. +     ..+..+..+....|...+.  .
T Consensus       118 ~~~vv~~~~~~~~~-------~~~~~a~~~l~--~~~~~~i~tN~d~~~~~~~g~~~~~~g~~~~~i~~~~g~~~~~--~  186 (236)
T TIGR01460       118 PAAVIVGEPSDFSY-------DELAKAAYLLA--EGDVPFIAANRDDLVRLGDGRFRPGAGAIAAGIKELSGREPTV--V  186 (236)
T ss_pred             CeEEEECCCCCcCH-------HHHHHHHHHHh--CCCCeEEEECCCCCCCCCCCcEeecchHHHHHHHHHhCceeee--e
Confidence            45788888877653       33333444443  24357999997743321 1     1245566676666766542  4


Q ss_pred             CCCch-hHHHHHHHhCCCCCcE-EEEccCCcccHHHHHHcCCeEEEEcC
Q 017982          257 KKPAG-TAEEIEKHFGCQSSQL-IMVGDRPFTDIVYGNRNGFLTILTEP  303 (363)
Q Consensus       257 kKP~p-~~~~alk~lgl~pee~-vmVGDrL~TDI~~A~raGi~TIlV~p  303 (363)
                      +||.+ .++.++++++++++++ +||||++.+||.+|+++|+.+|+|..
T Consensus       187 ~KP~~~~~~~~~~~~~~~~~~~~~~IGD~~~~Di~~A~~~G~~~i~v~~  235 (236)
T TIGR01460       187 GKPSPAIYRAALNLLQARPERRDVMVGDNLRTDILGAKNAGFDTLLVLT  235 (236)
T ss_pred             cCCCHHHHHHHHHHhCCCCccceEEECCCcHHHHHHHHHCCCcEEEEec
Confidence            79999 5689999999999998 99999998999999999999999964

Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.

>smart00577 CPDc catalytic domain of ctd-like phosphatases

Probab=99.09  E-value=2.1e-10  Score=100.60  Aligned_cols=101  Identities=17%  Similarity=0.127  Sum_probs=79.8

Q ss_pred             CEEEEcCCceeecCC--------CC-----------------CcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHH
Q 017982          184 KGVVFDKDNTLTAPY--------SL-----------------TLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDAS  238 (363)
Q Consensus       184 kaVV~DlDnTL~~~~--------~~-----------------~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~  238 (363)
                      ..+|+|+|+||..-.        ..                 .++|++.++|+.|+ + +++++|+||+.        ..
T Consensus         3 ~~lvldld~tl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~pG~~e~L~~L~-~-~~~l~I~Ts~~--------~~   72 (148)
T smart00577        3 KTLVLDLDETLVHSTHRSFKEWTNRDFIVPVLIDGHPHGVYVKKRPGVDEFLKRAS-E-LFELVVFTAGL--------RM   72 (148)
T ss_pred             cEEEEeCCCCeECCCCCcCCCCCccceEEEEEeCCceEEEEEEECCCHHHHHHHHH-h-ccEEEEEeCCc--------HH
Confidence            468999999997521        01                 24899999999997 3 78999999996        46


Q ss_pred             HHHHHHHHhCCe--E---EE----cccCCCchhHHHHHHHhCCCCCcEEEEccCCcccHHHHHHcCCe
Q 017982          239 KARKLEGKIGIK--V---IR----HRVKKPAGTAEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGFL  297 (363)
Q Consensus       239 ~a~~i~~~LGi~--~---I~----~~~kKP~p~~~~alk~lgl~pee~vmVGDrL~TDI~~A~raGi~  297 (363)
                      .++.+++.+++.  +   |.    ....||.  +.++++++|++|++|+||||+. .|+.+|.++|+.
T Consensus        73 ~~~~il~~l~~~~~~f~~i~~~~d~~~~KP~--~~k~l~~l~~~p~~~i~i~Ds~-~~~~aa~~ngI~  137 (148)
T smart00577       73 YADPVLDLLDPKKYFGYRRLFRDECVFVKGK--YVKDLSLLGRDLSNVIIIDDSP-DSWPFHPENLIP  137 (148)
T ss_pred             HHHHHHHHhCcCCCEeeeEEECccccccCCe--EeecHHHcCCChhcEEEEECCH-HHhhcCccCEEE
Confidence            777888888773  2   21    1345776  7788999999999999999999 799999988863

>PRK13225 phosphoglycolate phosphatase; Provisional

Probab=99.08  E-value=7.4e-10  Score=106.87  Aligned_cols=98  Identities=12%  Similarity=0.197  Sum_probs=78.6

Q ss_pred             CCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCeE----EE-cccCCCch-hHHHHHHHhCC
Q 017982          199 SLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKV----IR-HRVKKPAG-TAEEIEKHFGC  272 (363)
Q Consensus       199 ~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~~----I~-~~~kKP~p-~~~~alk~lgl  272 (363)
                      ...++|++.++|+.|+ ..|++++|+||+.        ...+..+++.+|+..    +. ....++.+ .+..+++++++
T Consensus       140 ~~~l~pg~~e~L~~L~-~~gi~laIvSn~~--------~~~~~~~L~~~gl~~~F~~vi~~~~~~~k~~~~~~~l~~~~~  210 (273)
T PRK13225        140 ALQLFPGVADLLAQLR-SRSLCLGILSSNS--------RQNIEAFLQRQGLRSLFSVVQAGTPILSKRRALSQLVAREGW  210 (273)
T ss_pred             cCCcCCCHHHHHHHHH-HCCCeEEEEeCCC--------HHHHHHHHHHcCChhheEEEEecCCCCCCHHHHHHHHHHhCc
Confidence            3457899999999998 5799999999996        367778888888752    21 11112223 56889999999


Q ss_pred             CCCcEEEEccCCcccHHHHHHcCCeEEEEcCCCC
Q 017982          273 QSSQLIMVGDRPFTDIVYGNRNGFLTILTEPLSL  306 (363)
Q Consensus       273 ~pee~vmVGDrL~TDI~~A~raGi~TIlV~p~~~  306 (363)
                      +|++++||||+. .||.+|+++|+.+|+|..+..
T Consensus       211 ~p~~~l~IGDs~-~Di~aA~~AG~~~I~v~~g~~  243 (273)
T PRK13225        211 QPAAVMYVGDET-RDVEAARQVGLIAVAVTWGFN  243 (273)
T ss_pred             ChhHEEEECCCH-HHHHHHHHCCCeEEEEecCCC
Confidence            999999999998 799999999999999976543

>KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only]

Probab=99.02  E-value=2.1e-09  Score=100.32  Aligned_cols=50  Identities=24%  Similarity=0.301  Sum_probs=46.7

Q ss_pred             cCCCchh-HHHHHHHhCCCCCcEEEEccCCcccHHHHHHcCCeEEEEcCCC
Q 017982          256 VKKPAGT-AEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGFLTILTEPLS  305 (363)
Q Consensus       256 ~kKP~p~-~~~alk~lgl~pee~vmVGDrL~TDI~~A~raGi~TIlV~p~~  305 (363)
                      ++||++. |+.+++.+|++|+++|||||.+..|+-+|.+.||..|+|+.+.
T Consensus       179 vGKP~~~fFe~al~~~gv~p~~aVMIGDD~~dDvgGAq~~GMrgilVkTGK  229 (262)
T KOG3040|consen  179 VGKPSPFFFESALQALGVDPEEAVMIGDDLNDDVGGAQACGMRGILVKTGK  229 (262)
T ss_pred             ecCCCHHHHHHHHHhcCCChHHheEEccccccchhhHhhhcceeEEeeccc
Confidence            7899994 6999999999999999999999999999999999999998654

>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459

Probab=99.01  E-value=2e-09  Score=101.14  Aligned_cols=96  Identities=22%  Similarity=0.175  Sum_probs=71.9

Q ss_pred             chhHHHHHHHHHHhCCCeEEEEeCCCCCCCCC----c-cHHHHHHHHHHhCCeEEEcccCCCch-hHHHHHHHhCCC-CC
Q 017982          203 WGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYD----N-DASKARKLEGKIGIKVIRHRVKKPAG-TAEEIEKHFGCQ-SS  275 (363)
Q Consensus       203 ~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~d----p-~~~~a~~i~~~LGi~~I~~~~kKP~p-~~~~alk~lgl~-pe  275 (363)
                      ++++.+.++.++ +.|+++ |+||.+..++..    + .+..+..+.. .+...+  ..+||++ .++.++++++.. ++
T Consensus       140 ~~~~~~~l~~l~-~~g~~~-i~tN~d~~~~~~~~~~~~~g~~~~~i~~-~g~~~~--~~gKP~~~~~~~~~~~~~~~~~~  214 (242)
T TIGR01459       140 LDEFDELFAPIV-ARKIPN-ICANPDRGINQHGIYRYGAGYYAELIKQ-LGGKVI--YSGKPYPAIFHKALKECSNIPKN  214 (242)
T ss_pred             HHHHHHHHHHHH-hCCCcE-EEECCCEeccCCCceEecccHHHHHHHH-hCCcEe--cCCCCCHHHHHHHHHHcCCCCcc
Confidence            688899998886 568886 999998655421    1 1233333332 454443  2689999 568999999875 67


Q ss_pred             cEEEEccCCcccHHHHHHcCCeEEEEcC
Q 017982          276 QLIMVGDRPFTDIVYGNRNGFLTILTEP  303 (363)
Q Consensus       276 e~vmVGDrL~TDI~~A~raGi~TIlV~p  303 (363)
                      +++||||++.+||.+|+++|+.+|||..
T Consensus       215 ~~~~vGD~~~~Di~~a~~~G~~~i~v~t  242 (242)
T TIGR01459       215 RMLMVGDSFYTDILGANRLGIDTALVLT  242 (242)
T ss_pred             cEEEECCCcHHHHHHHHHCCCeEEEEeC
Confidence            9999999988999999999999999963

This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)

>TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672

Probab=99.00  E-value=3.4e-09  Score=100.80  Aligned_cols=87  Identities=16%  Similarity=0.075  Sum_probs=65.9

Q ss_pred             hHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCeE----EEc----ccCCCchhHHHHHHHhCCCCCc
Q 017982          205 PLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKV----IRH----RVKKPAGTAEEIEKHFGCQSSQ  276 (363)
Q Consensus       205 ~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~~----I~~----~~kKP~p~~~~alk~lgl~pee  276 (363)
                      .+.++|+.++ +.|++++|+||+...    .....++.+++.+|++.    +..    ...||++.  .+++++++    
T Consensus       118 ~a~elL~~l~-~~G~~i~iVTnr~~~----k~~~~a~~ll~~lGi~~~f~~i~~~d~~~~~Kp~~~--~~l~~~~i----  186 (237)
T TIGR01672       118 VARQLIDMHQ-RRGDAIFFVTGRTPG----KTDTVSKTLAKNFHIPAMNPVIFAGDKPGQYQYTKT--QWIQDKNI----  186 (237)
T ss_pred             HHHHHHHHHH-HCCCEEEEEeCCCCC----cCHHHHHHHHHHhCCchheeEEECCCCCCCCCCCHH--HHHHhCCC----
Confidence            4888999998 579999999998421    01356788888899872    221    12466652  46667776    


Q ss_pred             EEEEccCCcccHHHHHHcCCeEEEEcC
Q 017982          277 LIMVGDRPFTDIVYGNRNGFLTILTEP  303 (363)
Q Consensus       277 ~vmVGDrL~TDI~~A~raGi~TIlV~p  303 (363)
                      ++||||+. .||.+|+++|+.+|.|.-
T Consensus       187 ~i~vGDs~-~DI~aAk~AGi~~I~V~~  212 (237)
T TIGR01672       187 RIHYGDSD-NDITAAKEAGARGIRILR  212 (237)
T ss_pred             eEEEeCCH-HHHHHHHHCCCCEEEEEe
Confidence            79999999 799999999999999973

Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion.

>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5

Probab=98.97  E-value=3.8e-09  Score=103.87  Aligned_cols=119  Identities=23%  Similarity=0.203  Sum_probs=78.4

Q ss_pred             CCCEEEEcCCceeecCCCCCcchhHHHHHHHHHHh--CCC------eEEEEeCCCCCCCCC-----c-cHHHHHHHHH--
Q 017982          182 GFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSV--FGH------DIAVFSNSAGLYEYD-----N-DASKARKLEG--  245 (363)
Q Consensus       182 GIkaVV~DlDnTL~~~~~~~~~p~v~e~L~~Lk~~--~Gi------kl~IVSN~~g~~~~d-----p-~~~~a~~i~~--  245 (363)
                      .+.+||+..|....       +..+..+...++..  .|.      ..+|+||.+..++.+     + .+..+..+..  
T Consensus       146 ~~~aVvv~~d~~~~-------~~~l~~~~~~l~~~g~~g~~~~~~~~~~i~~n~D~~~p~~~g~~~~g~Ga~~~~l~~~~  218 (321)
T TIGR01456       146 RFDAVLVFNDPVDW-------AADIQIISDALNSEGLPGEKSGKPSIPIYFSNQDLLWANEYKLNRFGQGAFRLLLERIY  218 (321)
T ss_pred             ceeEEEEecCchHH-------hhhHHHHHHHHhCCCCcCCCCCCCCCCEEEeCCCEeeccCCCCceechHHHHHHHHHHH
Confidence            56777776664321       22333445455421  121      368999999877621     1 3555666655  


Q ss_pred             --HhCCeEEEcccCCCch-hHHHHHHHh--------CC-----CCCcEEEEccCCcccHHHHHHcCCeEEEEcCCCCC
Q 017982          246 --KIGIKVIRHRVKKPAG-TAEEIEKHF--------GC-----QSSQLIMVGDRPFTDIVYGNRNGFLTILTEPLSLA  307 (363)
Q Consensus       246 --~LGi~~I~~~~kKP~p-~~~~alk~l--------gl-----~pee~vmVGDrL~TDI~~A~raGi~TIlV~p~~~~  307 (363)
                        ..|.+.-....+||++ .|+.+++.+        ++     ++++++||||++.|||.+|+++|+.||||..+..+
T Consensus       219 ~~~tg~~~~~~~~GKP~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~mIGD~~~tDI~ga~~~G~~silV~tG~~~  296 (321)
T TIGR01456       219 LELNGKPLQYYTLGKPTKLTYDFAEDVLIDWEKRLSGTKPSTSPFHALYMVGDNPASDIIGAQNYGWFSCLVKTGVYN  296 (321)
T ss_pred             HHhcCCCcceEEcCCCChHHHHHHHHHHHHHHhhhccccccCCChheEEEEcCChhhhhhhHHhCCceEEEecccccC
Confidence              3465421112689999 467777777        43     45799999999999999999999999999987444

The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.

>PRK11009 aphA acid phosphatase/phosphotransferase; Provisional

Probab=98.97  E-value=8.5e-09  Score=98.07  Aligned_cols=92  Identities=16%  Similarity=0.090  Sum_probs=68.0

Q ss_pred             cchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCe------EEEc--ccCCCchhHHHHHHHhCCC
Q 017982          202 LWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK------VIRH--RVKKPAGTAEEIEKHFGCQ  273 (363)
Q Consensus       202 ~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~------~I~~--~~kKP~p~~~~alk~lgl~  273 (363)
                      ++|++.+.|+.++ +.|+++++|||.....    ....++.+++.+|++      .+..  ...||.+  ..+++.+++ 
T Consensus       115 p~~Ga~elL~~L~-~~G~~I~iVTnR~~~k----~~~t~~~Llk~~gip~~~~f~vil~gd~~~K~~K--~~~l~~~~i-  186 (237)
T PRK11009        115 PKEVARQLIDMHV-KRGDSIYFITGRTATK----TETVSKTLADDFHIPADNMNPVIFAGDKPGQYTK--TQWLKKKNI-  186 (237)
T ss_pred             chHHHHHHHHHHH-HCCCeEEEEeCCCCcc----cHHHHHHHHHHcCCCcccceeEEEcCCCCCCCCH--HHHHHhcCC-
Confidence            4677999999998 5799999999975211    134567778789993      2221  1236665  235566665 


Q ss_pred             CCcEEEEccCCcccHHHHHHcCCeEEEEcCCC
Q 017982          274 SSQLIMVGDRPFTDIVYGNRNGFLTILTEPLS  305 (363)
Q Consensus       274 pee~vmVGDrL~TDI~~A~raGi~TIlV~p~~  305 (363)
                         ++||||++ .||.+|+++|+.+|.|.-+.
T Consensus       187 ---~I~IGDs~-~Di~aA~~AGi~~I~v~~G~  214 (237)
T PRK11009        187 ---RIFYGDSD-NDITAAREAGARGIRILRAA  214 (237)
T ss_pred             ---eEEEcCCH-HHHHHHHHcCCcEEEEecCC
Confidence               99999999 79999999999999997443

>PLN02919 haloacid dehalogenase-like hydrolase family protein

Probab=98.95  E-value=2.2e-09  Score=120.53  Aligned_cols=95  Identities=21%  Similarity=0.193  Sum_probs=80.9

Q ss_pred             CcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCe-----EEE----cccCCCch-hHHHHHHHh
Q 017982          201 TLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK-----VIR----HRVKKPAG-TAEEIEKHF  270 (363)
Q Consensus       201 ~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~-----~I~----~~~kKP~p-~~~~alk~l  270 (363)
                      .++|++.++|+.|+ +.|++++|+||+.        ...++.+++.+|+.     .+.    ....||+| .|..+++++
T Consensus       161 ~~~pG~~elL~~Lk-~~G~~l~IvSn~~--------~~~~~~~L~~~gl~~~~Fd~iv~~~~~~~~KP~Pe~~~~a~~~l  231 (1057)
T PLN02919        161 IGFPGALELITQCK-NKGLKVAVASSAD--------RIKVDANLAAAGLPLSMFDAIVSADAFENLKPAPDIFLAAAKIL  231 (1057)
T ss_pred             ccCccHHHHHHHHH-hCCCeEEEEeCCc--------HHHHHHHHHHcCCChhHCCEEEECcccccCCCCHHHHHHHHHHc
Confidence            36899999999998 5799999999996        36677778888874     121    24579999 678999999


Q ss_pred             CCCCCcEEEEccCCcccHHHHHHcCCeEEEEcCCC
Q 017982          271 GCQSSQLIMVGDRPFTDIVYGNRNGFLTILTEPLS  305 (363)
Q Consensus       271 gl~pee~vmVGDrL~TDI~~A~raGi~TIlV~p~~  305 (363)
                      |++|++++||||+. .||++|+++||.+|+|....
T Consensus       232 gv~p~e~v~IgDs~-~Di~AA~~aGm~~I~v~~~~  265 (1057)
T PLN02919        232 GVPTSECVVIEDAL-AGVQAARAAGMRCIAVTTTL  265 (1057)
T ss_pred             CcCcccEEEEcCCH-HHHHHHHHcCCEEEEECCCC
Confidence            99999999999998 79999999999999998654

>PLN02954 phosphoserine phosphatase

Probab=98.93  E-value=1e-08  Score=94.05  Aligned_cols=91  Identities=16%  Similarity=0.251  Sum_probs=68.1

Q ss_pred             CcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCe---EEE-----c--------------ccCC
Q 017982          201 TLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK---VIR-----H--------------RVKK  258 (363)
Q Consensus       201 ~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~---~I~-----~--------------~~kK  258 (363)
                      .++|++.+.|+.|+ +.|++++|+||+.        ...++.+++.+|++   ++.     .              ...+
T Consensus        84 ~l~pg~~e~l~~l~-~~g~~~~IvS~~~--------~~~i~~~l~~~gi~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~  154 (224)
T PLN02954         84 RLSPGIPELVKKLR-ARGTDVYLVSGGF--------RQMIAPVAAILGIPPENIFANQILFGDSGEYAGFDENEPTSRSG  154 (224)
T ss_pred             CCCccHHHHHHHHH-HCCCEEEEECCCc--------HHHHHHHHHHhCCChhhEEEeEEEEcCCCcEECccCCCcccCCc
Confidence            35789999999998 5799999999996        36778888899885   221     0              0122


Q ss_pred             Cch-hHHHHHHHhCCCCCcEEEEccCCcccHHHHHHcCCeEEEEcC
Q 017982          259 PAG-TAEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGFLTILTEP  303 (363)
Q Consensus       259 P~p-~~~~alk~lgl~pee~vmVGDrL~TDI~~A~raGi~TIlV~p  303 (363)
                      |.+ .+..+++.+|.  ++++||||+. .|+.+|+.+|+..+.+..
T Consensus       155 ~K~~~i~~~~~~~~~--~~~i~iGDs~-~Di~aa~~~~~~~~~~~~  197 (224)
T PLN02954        155 GKAEAVQHIKKKHGY--KTMVMIGDGA-TDLEARKPGGADLFIGYG  197 (224)
T ss_pred             cHHHHHHHHHHHcCC--CceEEEeCCH-HHHHhhhcCCCCEEEecC
Confidence            333 35677777775  6999999999 799999998888766543

>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548

Probab=98.89  E-value=4.6e-09  Score=95.12  Aligned_cols=83  Identities=19%  Similarity=0.227  Sum_probs=67.1

Q ss_pred             cchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCeE----EE---cccCCCch-hHHHHHHHhCCC
Q 017982          202 LWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKV----IR---HRVKKPAG-TAEEIEKHFGCQ  273 (363)
Q Consensus       202 ~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~~----I~---~~~kKP~p-~~~~alk~lgl~  273 (363)
                      ..+.+.+.|+.|+ +.|++++|+||+.        ...++.+++.+|+..    +.   ....||++ .+..+++++|++
T Consensus       107 ~~~~~~~~L~~l~-~~g~~~~i~T~~~--------~~~~~~~l~~~gl~~~f~~~~~~~~~~~KP~p~~~~~~~~~~~~~  177 (197)
T TIGR01548       107 TLLTPKGLLRELH-RAPKGMAVVTGRP--------RKDAAKFLTTHGLEILFPVQIWMEDCPPKPNPEPLILAAKALGVE  177 (197)
T ss_pred             cccCHHHHHHHHH-HcCCcEEEECCCC--------HHHHHHHHHHcCchhhCCEEEeecCCCCCcCHHHHHHHHHHhCcC
Confidence            3445588999998 5799999999996        367788888898862    21   11239998 578999999999


Q ss_pred             CCcEEEEccCCcccHHHHHHc
Q 017982          274 SSQLIMVGDRPFTDIVYGNRN  294 (363)
Q Consensus       274 pee~vmVGDrL~TDI~~A~ra  294 (363)
                      +++++||||+. .||.+|+++
T Consensus       178 ~~~~i~vGD~~-~Di~aA~~a  197 (197)
T TIGR01548       178 ACHAAMVGDTV-DDIITGRKA  197 (197)
T ss_pred             cccEEEEeCCH-HHHHHHHhC
Confidence            99999999999 799999874

All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.

>PHA02597 30

Probab=98.89  E-value=1e-08  Score=92.52  Aligned_cols=94  Identities=12%  Similarity=0.094  Sum_probs=68.5

Q ss_pred             CCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCe---------EEEcccCCCch-hHHHHHHH
Q 017982          200 LTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK---------VIRHRVKKPAG-TAEEIEKH  269 (363)
Q Consensus       200 ~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~---------~I~~~~kKP~p-~~~~alk~  269 (363)
                      ..++|++.+.|++|++ .+ .++++||...        .....+.+.+++.         ++.....||.+ .+..++++
T Consensus        73 ~~~~pG~~e~L~~L~~-~~-~~~i~Tn~~~--------~~~~~~~~~~~l~~~f~~~f~~i~~~~~~~~kp~~~~~a~~~  142 (197)
T PHA02597         73 LSAYDDALDVINKLKE-DY-DFVAVTALGD--------SIDALLNRQFNLNALFPGAFSEVLMCGHDESKEKLFIKAKEK  142 (197)
T ss_pred             ccCCCCHHHHHHHHHh-cC-CEEEEeCCcc--------chhHHHHhhCCHHHhCCCcccEEEEeccCcccHHHHHHHHHH
Confidence            4579999999999984 44 7888899752        1112233333331         12233456666 57889999


Q ss_pred             hCCCCCcEEEEccCCcccHHHHHHc--CCeEEEEcCCCC
Q 017982          270 FGCQSSQLIMVGDRPFTDIVYGNRN--GFLTILTEPLSL  306 (363)
Q Consensus       270 lgl~pee~vmVGDrL~TDI~~A~ra--Gi~TIlV~p~~~  306 (363)
                      +|  +++++||||+. +||.+|+++  ||.+|+|..+..
T Consensus       143 ~~--~~~~v~vgDs~-~di~aA~~a~~Gi~~i~~~~~~~  178 (197)
T PHA02597        143 YG--DRVVCFVDDLA-HNLDAAHEALSQLPVIHMLRGER  178 (197)
T ss_pred             hC--CCcEEEeCCCH-HHHHHHHHHHcCCcEEEecchhh
Confidence            99  89999999999 799999999  999999986653

2 hypothetical protein; Provisional

>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E

Probab=98.88  E-value=6.5e-09  Score=89.81  Aligned_cols=83  Identities=20%  Similarity=0.226  Sum_probs=63.8

Q ss_pred             CcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHh-CC--eEEE----cccCCCch-hHHHHHHHhCC
Q 017982          201 TLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKI-GI--KVIR----HRVKKPAG-TAEEIEKHFGC  272 (363)
Q Consensus       201 ~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~L-Gi--~~I~----~~~kKP~p-~~~~alk~lgl  272 (363)
                      ...+++.+.|+.|+ +.|++++|+||+..        ..+..+++.+ +.  ..+.    .. .||.+ .+..+++++|+
T Consensus        64 ~~~~g~~e~l~~L~-~~g~~~~i~T~~~~--------~~~~~~~~~~l~~~f~~i~~~~~~~-~Kp~~~~~~~~~~~~~~  133 (154)
T TIGR01549        64 AYIRGAADLLKRLK-EAGIKLGIISNGSL--------RAQKLLLRKHLGDYFDLILGSDEFG-AKPEPEIFLAALESLGL  133 (154)
T ss_pred             eeccCHHHHHHHHH-HCcCeEEEEeCCch--------HHHHHHHHHHHHhcCcEEEecCCCC-CCcCHHHHHHHHHHcCC
Confidence            34689999999998 57999999999962        3344444442 21  1222    23 69998 57899999999


Q ss_pred             CCCcEEEEccCCcccHHHHHHcC
Q 017982          273 QSSQLIMVGDRPFTDIVYGNRNG  295 (363)
Q Consensus       273 ~pee~vmVGDrL~TDI~~A~raG  295 (363)
                      ++ +++||||+. .||.+|+++|
T Consensus       134 ~~-~~l~iGDs~-~Di~aa~~aG  154 (154)
T TIGR01549       134 PP-EVLHVGDNL-NDIEGARNAG  154 (154)
T ss_pred             CC-CEEEEeCCH-HHHHHHHHcc
Confidence            99 999999996 8999999987

HAD subfamilies caused by an overly broad single model.

>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated

Probab=98.86  E-value=1.1e-08  Score=104.87  Aligned_cols=94  Identities=17%  Similarity=0.135  Sum_probs=73.7

Q ss_pred             CCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCe----EEEc--c-cCCCch-hHHHHHHHhC
Q 017982          200 LTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK----VIRH--R-VKKPAG-TAEEIEKHFG  271 (363)
Q Consensus       200 ~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~----~I~~--~-~kKP~p-~~~~alk~lg  271 (363)
                      ..++|++.+.|+.|+ +.|++++|+||+.        ...+..+++.+|+.    .+..  . ..||.| .+..+++++ 
T Consensus       329 ~~l~pG~~e~L~~Lk-~~g~~l~IvS~~~--------~~~~~~~l~~~~l~~~f~~i~~~d~v~~~~kP~~~~~al~~l-  398 (459)
T PRK06698        329 GALYPNVKEIFTYIK-ENNCSIYIASNGL--------TEYLRAIVSYYDLDQWVTETFSIEQINSLNKSDLVKSILNKY-  398 (459)
T ss_pred             CCcCCCHHHHHHHHH-HCCCeEEEEeCCc--------hHHHHHHHHHCCcHhhcceeEecCCCCCCCCcHHHHHHHHhc-
Confidence            356899999999998 5799999999996        36777888888875    2211  1 123444 467777775 


Q ss_pred             CCCCcEEEEccCCcccHHHHHHcCCeEEEEcCCC
Q 017982          272 CQSSQLIMVGDRPFTDIVYGNRNGFLTILTEPLS  305 (363)
Q Consensus       272 l~pee~vmVGDrL~TDI~~A~raGi~TIlV~p~~  305 (363)
                       ++++|+||||+. .||.+|+++||.+|+|..+.
T Consensus       399 -~~~~~v~VGDs~-~Di~aAk~AG~~~I~v~~~~  430 (459)
T PRK06698        399 -DIKEAAVVGDRL-SDINAAKDNGLIAIGCNFDF  430 (459)
T ss_pred             -CcceEEEEeCCH-HHHHHHHHCCCeEEEEeCCC
Confidence             478999999998 89999999999999997554

>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase)

Probab=98.86  E-value=1e-08  Score=91.98  Aligned_cols=87  Identities=22%  Similarity=0.247  Sum_probs=73.9

Q ss_pred             CCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCe-EEEcccC--CCch-hHHHHHHHhCCCC
Q 017982          199 SLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK-VIRHRVK--KPAG-TAEEIEKHFGCQS  274 (363)
Q Consensus       199 ~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~-~I~~~~k--KP~p-~~~~alk~lgl~p  274 (363)
                      ...+.|++.++|+.|+ +.|++++|+|+..        ...+..+.+.+|+. .+..+..  ||.+ .+..+++.+++++
T Consensus       125 ~d~~~~~~~~~l~~L~-~~Gi~~~i~TGD~--------~~~a~~~~~~lgi~~~~v~a~~~~kP~~k~~~~~i~~l~~~~  195 (215)
T PF00702_consen  125 RDPLRPGAKEALQELK-EAGIKVAILTGDN--------ESTASAIAKQLGIFDSIVFARVIGKPEPKIFLRIIKELQVKP  195 (215)
T ss_dssp             EEEBHTTHHHHHHHHH-HTTEEEEEEESSE--------HHHHHHHHHHTTSCSEEEEESHETTTHHHHHHHHHHHHTCTG
T ss_pred             cCcchhhhhhhhhhhh-ccCcceeeeeccc--------cccccccccccccccccccccccccccchhHHHHHHHHhcCC
Confidence            3457899999999998 5799999999764        47788999999995 3223345  9998 5689999999999


Q ss_pred             CcEEEEccCCcccHHHHHHcC
Q 017982          275 SQLIMVGDRPFTDIVYGNRNG  295 (363)
Q Consensus       275 ee~vmVGDrL~TDI~~A~raG  295 (363)
                      ++++||||.+ +|+.++++||
T Consensus       196 ~~v~~vGDg~-nD~~al~~Ag  215 (215)
T PF00702_consen  196 GEVAMVGDGV-NDAPALKAAG  215 (215)
T ss_dssp             GGEEEEESSG-GHHHHHHHSS
T ss_pred             CEEEEEccCH-HHHHHHHhCc
Confidence            9999999999 9999999987

This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....

>PRK11133 serB phosphoserine phosphatase; Provisional

Probab=98.85  E-value=1.5e-08  Score=100.26  Aligned_cols=89  Identities=16%  Similarity=0.177  Sum_probs=71.2

Q ss_pred             cchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCeEEEc------------------ccCCCch-h
Q 017982          202 LWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKVIRH------------------RVKKPAG-T  262 (363)
Q Consensus       202 ~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~~I~~------------------~~kKP~p-~  262 (363)
                      ++|++.+.|+.|+ +.|++++|+|++..        ..++.+.+.+|++.++.                  ...||.+ .
T Consensus       182 l~pGa~elL~~Lk-~~G~~~aIvSgg~~--------~~~~~l~~~Lgld~~~an~lei~dg~ltg~v~g~iv~~k~K~~~  252 (322)
T PRK11133        182 LMPGLTELVLKLQ-ALGWKVAIASGGFT--------YFADYLRDKLRLDAAVANELEIMDGKLTGNVLGDIVDAQYKADT  252 (322)
T ss_pred             CChhHHHHHHHHH-HcCCEEEEEECCcc--------hhHHHHHHHcCCCeEEEeEEEEECCEEEeEecCccCCcccHHHH
Confidence            5788888899998 68999999999962        34567777888764210                  1235655 5


Q ss_pred             HHHHHHHhCCCCCcEEEEccCCcccHHHHHHcCCeEEE
Q 017982          263 AEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGFLTIL  300 (363)
Q Consensus       263 ~~~alk~lgl~pee~vmVGDrL~TDI~~A~raGi~TIl  300 (363)
                      +.++++++|++++++++|||.. +|+.++..+|+..++
T Consensus       253 L~~la~~lgi~~~qtIaVGDg~-NDl~m~~~AGlgiA~  289 (322)
T PRK11133        253 LTRLAQEYEIPLAQTVAIGDGA-NDLPMIKAAGLGIAY  289 (322)
T ss_pred             HHHHHHHcCCChhhEEEEECCH-HHHHHHHHCCCeEEe
Confidence            6889999999999999999999 899999999997765

>TIGR02244 HAD-IG-Ncltidse HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase

Probab=98.85  E-value=1.7e-08  Score=100.75  Aligned_cols=96  Identities=17%  Similarity=0.247  Sum_probs=74.2

Q ss_pred             cchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHh-C-------Ce----EEEcccCCC----------
Q 017982          202 LWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKI-G-------IK----VIRHRVKKP----------  259 (363)
Q Consensus       202 ~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~L-G-------i~----~I~~~~kKP----------  259 (363)
                      ..|++.++|++|+ +.|++++|+||++        ...+..+++.+ |       +.    +|..+.+||          
T Consensus       185 ~~pgl~elL~~Lr-~~G~klfLvTNS~--------~~yt~~im~~l~g~~~~~~~w~~yFD~IIt~a~KP~FF~~~~pf~  255 (343)
T TIGR02244       185 RDPKLPLFLSKLK-EHGKKLFLLTNSD--------YDYTDKGMKYLLGPFLGEHDWRDYFDVVIVDARKPGFFTEGRPFR  255 (343)
T ss_pred             cchhHHHHHHHHH-HCCCeEEEEeCCC--------HHHHHHHHHHhhCCcccccchHhhCcEEEeCCCCCcccCCCCceE
Confidence            4789999999998 5799999999997        35666777765 5       22    232233343          


Q ss_pred             -------------------ch-----hHHHHHHHhCCCCCcEEEEccCCcccHHHHH-HcCCeEEEEcCCCC
Q 017982          260 -------------------AG-----TAEEIEKHFGCQSSQLIMVGDRPFTDIVYGN-RNGFLTILTEPLSL  306 (363)
Q Consensus       260 -------------------~p-----~~~~alk~lgl~pee~vmVGDrL~TDI~~A~-raGi~TIlV~p~~~  306 (363)
                                         ..     ......+.+|+.+++++||||++++||.+|+ .+|+.||+|.|--.
T Consensus       256 ~v~~~~g~~~~~~~~~l~~g~vY~gGn~~~~~~~l~~~~~~vlYvGD~i~~Di~~~kk~~Gw~TvlI~pEL~  327 (343)
T TIGR02244       256 QVDVETGSLKWGEVDGLEPGKVYSGGSLKQFHELLKWRGKEVLYFGDHIYGDLLRSKKKRGWRTAAIIPELE  327 (343)
T ss_pred             EEeCCCCcccCCccccccCCCeEeCCCHHHHHHHHCCCCCcEEEECCcchHHHHhhHHhcCcEEEEEchhHH
Confidence                               11     1356777889999999999999999999999 99999999998543

A TIGRFAMs model (TIGR01993) represents a (putative) family of _pyrimidine_ 5'-nucleotidases which are also subfamily I HAD's, which should not be confused with the current model.

>PRK13582 thrH phosphoserine phosphatase; Provisional

Probab=98.84  E-value=1.4e-08  Score=91.82  Aligned_cols=90  Identities=16%  Similarity=0.160  Sum_probs=66.2

Q ss_pred             CcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCeEEE------------ccc--CCCchhHHHH
Q 017982          201 TLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKVIR------------HRV--KKPAGTAEEI  266 (363)
Q Consensus       201 ~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~~I~------------~~~--kKP~p~~~~a  266 (363)
                      .++|++.+.|+.|+ +. ++++|+||+.        ...++.+++.+|++.++            .+.  .+|.+ ...+
T Consensus        68 ~~~pg~~e~L~~L~-~~-~~~~IvS~~~--------~~~~~~~l~~~gl~~~f~~~~~~~~~~~i~~~~~~~p~~-k~~~  136 (205)
T PRK13582         68 DPLPGAVEFLDWLR-ER-FQVVILSDTF--------YEFAGPLMRQLGWPTLFCHSLEVDEDGMITGYDLRQPDG-KRQA  136 (205)
T ss_pred             CCCCCHHHHHHHHH-hc-CCEEEEeCCc--------HHHHHHHHHHcCCchhhcceEEECCCCeEECccccccch-HHHH
Confidence            35789999999998 45 7999999996        46677888888876211            011  23433 3456


Q ss_pred             HHHhCCCCCcEEEEccCCcccHHHHHHcCCeEEEEcC
Q 017982          267 EKHFGCQSSQLIMVGDRPFTDIVYGNRNGFLTILTEP  303 (363)
Q Consensus       267 lk~lgl~pee~vmVGDrL~TDI~~A~raGi~TIlV~p  303 (363)
                      ++.++..+++++||||+. +|+.+|+.+|+. +++.+
T Consensus       137 l~~~~~~~~~~v~iGDs~-~D~~~~~aa~~~-v~~~~  171 (205)
T PRK13582        137 VKALKSLGYRVIAAGDSY-NDTTMLGEADAG-ILFRP  171 (205)
T ss_pred             HHHHHHhCCeEEEEeCCH-HHHHHHHhCCCC-EEECC
Confidence            667777789999999998 899999999984 44543

>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal

Probab=98.80  E-value=3e-08  Score=88.65  Aligned_cols=91  Identities=18%  Similarity=0.229  Sum_probs=71.7

Q ss_pred             CCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCeEEE--------cccCCCch----------
Q 017982          200 LTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKVIR--------HRVKKPAG----------  261 (363)
Q Consensus       200 ~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~~I~--------~~~kKP~p----------  261 (363)
                      ..++|++.+.|+.|+ +.|++++|+||+.        ...++.+++.+|+..++        .+..+|.+          
T Consensus        79 ~~~~~g~~e~l~~l~-~~g~~~~IvS~~~--------~~~~~~~l~~~g~~~~~~~~~~~~~~g~~~p~~~~~~~~~~k~  149 (201)
T TIGR01491        79 ISLRDYAEELVRWLK-EKGLKTAIVSGGI--------MCLAKKVAEKLNPDYVYSNELVFDEKGFIQPDGIVRVTFDNKG  149 (201)
T ss_pred             CCCCccHHHHHHHHH-HCCCEEEEEeCCc--------HHHHHHHHHHhCCCeEEEEEEEEcCCCeEecceeeEEccccHH
Confidence            457899999999998 5799999999996        36778888899986432        11122321          


Q ss_pred             -hHHHHHHHhCCCCCcEEEEccCCcccHHHHHHcCCeEEE
Q 017982          262 -TAEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGFLTIL  300 (363)
Q Consensus       262 -~~~~alk~lgl~pee~vmVGDrL~TDI~~A~raGi~TIl  300 (363)
                       .+..+++++|+++++++||||+. +|+.+|+.+|+..+.
T Consensus       150 ~~~~~~~~~~~~~~~~~i~iGDs~-~D~~~a~~ag~~~a~  188 (201)
T TIGR01491       150 EAVERLKRELNPSLTETVAVGDSK-NDLPMFEVADISISL  188 (201)
T ss_pred             HHHHHHHHHhCCCHHHEEEEcCCH-hHHHHHHhcCCeEEE
Confidence             35677888999999999999998 899999999995544

This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.

>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]

Probab=98.69  E-value=3e-08  Score=88.89  Aligned_cols=106  Identities=19%  Similarity=0.260  Sum_probs=81.8

Q ss_pred             HcCCCEEEEcCCceeecC------CCC-----CcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhC
Q 017982          180 RRGFKGVVFDKDNTLTAP------YSL-----TLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIG  248 (363)
Q Consensus       180 ~~GIkaVV~DlDnTL~~~------~~~-----~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LG  248 (363)
                      ...||.+++|+|+||+.-      +..     .+.++  -.++.|. +.|++++|+|..++        ..++.-++.||
T Consensus         5 a~~IkLli~DVDGvLTDG~ly~~~~Gee~KaFnv~DG--~Gik~l~-~~Gi~vAIITGr~s--------~ive~Ra~~LG   73 (170)
T COG1778           5 AKNIKLLILDVDGVLTDGKLYYDENGEEIKAFNVRDG--HGIKLLL-KSGIKVAIITGRDS--------PIVEKRAKDLG   73 (170)
T ss_pred             hhhceEEEEeccceeecCeEEEcCCCceeeeeeccCc--HHHHHHH-HcCCeEEEEeCCCC--------HHHHHHHHHcC
Confidence            467999999999999851      111     11222  1355666 68999999998873        67888889999


Q ss_pred             CeEEEcccCCCchhHHHHHHHhCCCCCcEEEEccCCcccHHHHHHcCCe
Q 017982          249 IKVIRHRVKKPAGTAEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGFL  297 (363)
Q Consensus       249 i~~I~~~~kKP~p~~~~alk~lgl~pee~vmVGDrL~TDI~~A~raGi~  297 (363)
                      |+.++.+...-...++++++++++.++++++|||.+ .|+-.-.+.|+.
T Consensus        74 I~~~~qG~~dK~~a~~~L~~~~~l~~e~~ayiGDD~-~Dlpvm~~vGls  121 (170)
T COG1778          74 IKHLYQGISDKLAAFEELLKKLNLDPEEVAYVGDDL-VDLPVMEKVGLS  121 (170)
T ss_pred             CceeeechHhHHHHHHHHHHHhCCCHHHhhhhcCcc-ccHHHHHHcCCc
Confidence            998874433333367999999999999999999999 799999999974

>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase

Probab=98.66  E-value=1.8e-08  Score=88.87  Aligned_cols=79  Identities=18%  Similarity=0.304  Sum_probs=62.7

Q ss_pred             CCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCeE-----EE---cccCCCch-hHHHHHHH
Q 017982          199 SLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKV-----IR---HRVKKPAG-TAEEIEKH  269 (363)
Q Consensus       199 ~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~~-----I~---~~~kKP~p-~~~~alk~  269 (363)
                      ...++|++.+.|+        +++|+||+.        ...+..+++.+|+..     +.   .+..||+| .|..++++
T Consensus        88 ~~~~~~g~~~~L~--------~~~i~Tn~~--------~~~~~~~l~~~~l~~~fd~v~~~~~~~~~KP~p~~f~~~~~~  151 (175)
T TIGR01493        88 NLPPWPDSAAALA--------RVAILSNAS--------HWAFDQFAQQAGLPWYFDRAFSVDTVRAYKPDPVVYELVFDT  151 (175)
T ss_pred             cCCCCCchHHHHH--------HHhhhhCCC--------HHHHHHHHHHCCCHHHHhhhccHhhcCCCCCCHHHHHHHHHH
Confidence            4457899988886        378999996        355666777777751     22   25679999 67999999


Q ss_pred             hCCCCCcEEEEccCCcccHHHHHHc
Q 017982          270 FGCQSSQLIMVGDRPFTDIVYGNRN  294 (363)
Q Consensus       270 lgl~pee~vmVGDrL~TDI~~A~ra  294 (363)
                      +|++|++|+||||+. .||.+|+++
T Consensus       152 ~~~~p~~~l~vgD~~-~Di~~A~~~  175 (175)
T TIGR01493       152 VGLPPDRVLMVAAHQ-WDLIGARKF  175 (175)
T ss_pred             HCCCHHHeEeEecCh-hhHHHHhcC
Confidence            999999999999997 899999864

The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o

>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed

Probab=98.53  E-value=3.9e-07  Score=84.22  Aligned_cols=86  Identities=13%  Similarity=0.073  Sum_probs=68.0

Q ss_pred             CCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCe---EE-----E----cccCCCchh-----
Q 017982          200 LTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK---VI-----R----HRVKKPAGT-----  262 (363)
Q Consensus       200 ~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~---~I-----~----~~~kKP~p~-----  262 (363)
                      ..++|++.+.|+.|+ +.|++++|+||+.        ...++.+++.+ +.   ++     +    ....||.+.     
T Consensus        73 ~~l~pG~~e~l~~l~-~~g~~~~IvS~~~--------~~~i~~il~~~-~~~~~i~~n~~~~~~~~~~~~kp~p~~~~~~  142 (219)
T PRK09552         73 AEIREGFHEFVQFVK-ENNIPFYVVSGGM--------DFFVYPLLQGL-IPKEQIYCNGSDFSGEYITITWPHPCDEHCQ  142 (219)
T ss_pred             CCcCcCHHHHHHHHH-HcCCeEEEECCCc--------HHHHHHHHHHh-CCcCcEEEeEEEecCCeeEEeccCCcccccc
Confidence            457899999999998 5899999999996        35667777776 43   22     1    124577652     


Q ss_pred             ------HHHHHHHhCCCCCcEEEEccCCcccHHHHHHcCC
Q 017982          263 ------AEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGF  296 (363)
Q Consensus       263 ------~~~alk~lgl~pee~vmVGDrL~TDI~~A~raGi  296 (363)
                            ...++++++.++++++||||+. +|+.+|+++|+
T Consensus       143 ~~~~~~K~~~l~~~~~~~~~~i~iGDs~-~Di~aa~~Ag~  181 (219)
T PRK09552        143 NHCGCCKPSLIRKLSDTNDFHIVIGDSI-TDLEAAKQADK  181 (219)
T ss_pred             ccCCCchHHHHHHhccCCCCEEEEeCCH-HHHHHHHHCCc
Confidence                  1468899999999999999998 89999999999

>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain

Probab=98.51  E-value=1.8e-07  Score=83.63  Aligned_cols=123  Identities=15%  Similarity=0.107  Sum_probs=87.8

Q ss_pred             CEEEEcCCceeecCCCC-----------------------CcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHH
Q 017982          184 KGVVFDKDNTLTAPYSL-----------------------TLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKA  240 (363)
Q Consensus       184 kaVV~DlDnTL~~~~~~-----------------------~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a  240 (363)
                      +.+|+|+|.||......                       ..-|++.++|+.|.+ . +.++|.|++.        ...+
T Consensus         2 ~~lvlDLDeTLi~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~RPgl~eFL~~l~~-~-yei~I~Ts~~--------~~yA   71 (162)
T TIGR02251         2 KTLVLDLDETLVHSTFKMPKVDADFKVPVLIDGKIIPVYVFKRPHVDEFLERVSK-W-YELVIFTASL--------EEYA   71 (162)
T ss_pred             cEEEEcCCCCcCCCCCCCCCCCCceEEEEEecCcEEEEEEEECCCHHHHHHHHHh-c-CEEEEEcCCc--------HHHH
Confidence            47899999999742110                       145899999999984 4 8999999996        4678


Q ss_pred             HHHHHHhCCe--EE----E-ccc--CCCchhHHHHHHHhCCCCCcEEEEccCCcccHHHHHHcCCeEEEEcCCCCCCchh
Q 017982          241 RKLEGKIGIK--VI----R-HRV--KKPAGTAEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGFLTILTEPLSLAEEPF  311 (363)
Q Consensus       241 ~~i~~~LGi~--~I----~-~~~--kKP~p~~~~alk~lgl~pee~vmVGDrL~TDI~~A~raGi~TIlV~p~~~~~e~~  311 (363)
                      +.+++.++..  ++    + ..+  .+|.  +.+.+..+|.++++++||||+. .|+.++..+|+..+-..+.  .++.-
T Consensus        72 ~~il~~ldp~~~~f~~~l~r~~~~~~~~~--~~K~L~~l~~~~~~vIiVDD~~-~~~~~~~~NgI~i~~f~~~--~~D~~  146 (162)
T TIGR02251        72 DPVLDILDRGGKVISRRLYRESCVFTNGK--YVKDLSLVGKDLSKVIIIDNSP-YSYSLQPDNAIPIKSWFGD--PNDTE  146 (162)
T ss_pred             HHHHHHHCcCCCEEeEEEEccccEEeCCC--EEeEchhcCCChhhEEEEeCCh-hhhccCccCEeecCCCCCC--CCHHH
Confidence            8899988854  21    1 111  2333  4567788999999999999999 6999999999876655532  23434


Q ss_pred             HHHHHHHHHH
Q 017982          312 IVRQVRKLEV  321 (363)
Q Consensus       312 ~t~~~R~lE~  321 (363)
                      ..+++..||.
T Consensus       147 L~~l~~~L~~  156 (162)
T TIGR02251       147 LLNLIPFLEG  156 (162)
T ss_pred             HHHHHHHHHH
Confidence            4556666665

This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.

>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459

Probab=98.49  E-value=5e-07  Score=84.91  Aligned_cols=106  Identities=13%  Similarity=0.125  Sum_probs=75.1

Q ss_pred             cCCCEEEEcCCceeecCCCCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCeE-EEcccCCC
Q 017982          181 RGFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKV-IRHRVKKP  259 (363)
Q Consensus       181 ~GIkaVV~DlDnTL~~~~~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~~-I~~~~kKP  259 (363)
                      ..++++++|+|+|+.  ....++|++.++|++|+ +.|++++|+||+...      .......++.+|++. .+...--+
T Consensus         6 ~~~~~~~~D~dG~l~--~~~~~~pga~e~L~~L~-~~G~~~~ivTN~~~~------~~~~~~~L~~~gl~~~~~~~Ii~s   76 (242)
T TIGR01459         6 NDYDVFLLDLWGVII--DGNHTYPGAVQNLNKII-AQGKPVYFVSNSPRN------IFSLHKTLKSLGINADLPEMIISS   76 (242)
T ss_pred             hcCCEEEEecccccc--cCCccCccHHHHHHHHH-HCCCEEEEEeCCCCC------hHHHHHHHHHCCCCccccceEEcc
Confidence            468999999999995  56678999999999998 579999999998631      122335678888764 22111111


Q ss_pred             c----hhHHHHHHHhCCCCCcEEEEccCCcccHHHHHHcCC
Q 017982          260 A----GTAEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGF  296 (363)
Q Consensus       260 ~----p~~~~alk~lgl~pee~vmVGDrL~TDI~~A~raGi  296 (363)
                      .    ..+..+++++++++++++||||.. .|+..-...|.
T Consensus        77 ~~~~~~~l~~~~~~~~~~~~~~~~vGd~~-~d~~~~~~~~~  116 (242)
T TIGR01459        77 GEIAVQMILESKKRFDIRNGIIYLLGHLE-NDIINLMQCYT  116 (242)
T ss_pred             HHHHHHHHHhhhhhccCCCceEEEeCCcc-cchhhhcCCCc
Confidence            1    124556677889999999999987 47765544443

This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)

>PLN02645 phosphoglycolate phosphatase

Probab=98.37  E-value=2.3e-06  Score=83.88  Aligned_cols=110  Identities=13%  Similarity=0.139  Sum_probs=75.6

Q ss_pred             CCCEEEEcCCceeecCCCCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCeEEEcccCCCch
Q 017982          182 GFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKVIRHRVKKPAG  261 (363)
Q Consensus       182 GIkaVV~DlDnTL~~~~~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~~I~~~~kKP~p  261 (363)
                      .+++++||+|+||..  ...++|++.++|++|+ +.|++++++||+....     ......-++.+|+++-...+-.+..
T Consensus        27 ~~~~~~~D~DGtl~~--~~~~~~ga~e~l~~lr-~~g~~~~~~TN~~~~~-----~~~~~~~l~~lGi~~~~~~I~ts~~   98 (311)
T PLN02645         27 SVETFIFDCDGVIWK--GDKLIEGVPETLDMLR-SMGKKLVFVTNNSTKS-----RAQYGKKFESLGLNVTEEEIFSSSF   98 (311)
T ss_pred             hCCEEEEeCcCCeEe--CCccCcCHHHHHHHHH-HCCCEEEEEeCCCCCC-----HHHHHHHHHHCCCCCChhhEeehHH
Confidence            699999999999963  4467899999999998 5799999999997421     2222233467887632111222322


Q ss_pred             hHHHHHHHhCCCCCcEEEEccCCcccHHHHHHcCCeEEE
Q 017982          262 TAEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGFLTIL  300 (363)
Q Consensus       262 ~~~~alk~lgl~pee~vmVGDrL~TDI~~A~raGi~TIl  300 (363)
                      .....++..+....+.++|++.- .+...+..+|+..+.
T Consensus        99 ~~~~~l~~~~~~~~~~V~viG~~-~~~~~l~~~Gi~~~~  136 (311)
T PLN02645         99 AAAAYLKSINFPKDKKVYVIGEE-GILEELELAGFQYLG  136 (311)
T ss_pred             HHHHHHHhhccCCCCEEEEEcCH-HHHHHHHHCCCEEec
Confidence            33556666666555567777765 588999999997653

>PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea

Probab=98.34  E-value=4e-06  Score=76.20  Aligned_cols=115  Identities=22%  Similarity=0.244  Sum_probs=73.7

Q ss_pred             CEEEEcCCceeecCC------------------------CCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHH
Q 017982          184 KGVVFDKDNTLTAPY------------------------SLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASK  239 (363)
Q Consensus       184 kaVV~DlDnTL~~~~------------------------~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~  239 (363)
                      +.||||+|.||-.++                        ...+||++.+.|+.|+ ..|++++|+|-++.       ...
T Consensus         4 klvvFDLD~TlW~~~~~~~~~~Pf~~~~~~~~v~D~~g~~v~lypdv~~iL~~L~-~~gv~lavASRt~~-------P~~   75 (169)
T PF12689_consen    4 KLVVFDLDYTLWPPWMDTHVGPPFKKISNGNVVVDSRGEEVSLYPDVPEILQELK-ERGVKLAVASRTDE-------PDW   75 (169)
T ss_dssp             SEEEE-STTTSSSS-TTTSS-S-EEE-TTS--EEETT--EE---TTHHHHHHHHH-HCT--EEEEE--S--------HHH
T ss_pred             cEEEEcCcCCCCchhHhhccCCCceecCCCCEEEeCCCCEEEeCcCHHHHHHHHH-HCCCEEEEEECCCC-------hHH
Confidence            678999999985321                        1147999999999999 58999999995541       267


Q ss_pred             HHHHHHHhCCe----------EEE--cccCCCch--hHHHHHHHhCCCCCcEEEEccCCcccHHHHHHcCCeEEEEcCCC
Q 017982          240 ARKLEGKIGIK----------VIR--HRVKKPAG--TAEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGFLTILTEPLS  305 (363)
Q Consensus       240 a~~i~~~LGi~----------~I~--~~~kKP~p--~~~~alk~lgl~pee~vmVGDrL~TDI~~A~raGi~TIlV~p~~  305 (363)
                      ++.+++.++++          -++  ....+-..  .|..+.+..|++.++++++-|.. ..+....+.|+.+++|..+.
T Consensus        76 A~~~L~~l~i~~~~~~~~~~~~~F~~~eI~~gsK~~Hf~~i~~~tgI~y~eMlFFDDe~-~N~~~v~~lGV~~v~v~~Gl  154 (169)
T PF12689_consen   76 ARELLKLLEIDDADGDGVPLIEYFDYLEIYPGSKTTHFRRIHRKTGIPYEEMLFFDDES-RNIEVVSKLGVTCVLVPDGL  154 (169)
T ss_dssp             HHHHHHHTT-C----------CCECEEEESSS-HHHHHHHHHHHH---GGGEEEEES-H-HHHHHHHTTT-EEEE-SSS-
T ss_pred             HHHHHHhcCCCccccccccchhhcchhheecCchHHHHHHHHHhcCCChhHEEEecCch-hcceeeEecCcEEEEeCCCC
Confidence            88999999887          221  11222222  47889999999999999999998 67888888999999998865


Q ss_pred             CC
Q 017982          306 LA  307 (363)
Q Consensus       306 ~~  307 (363)
                      +.
T Consensus       155 t~  156 (169)
T PF12689_consen  155 TW  156 (169)
T ss_dssp             -H
T ss_pred             CH
Confidence            33

The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A.

>PRK08238 hypothetical protein; Validated

Probab=98.33  E-value=4.5e-06  Score=86.96  Aligned_cols=91  Identities=13%  Similarity=0.164  Sum_probs=71.5

Q ss_pred             cchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCC-eEEEc----ccCCCchhHHHHHHHhCCCCCc
Q 017982          202 LWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGI-KVIRH----RVKKPAGTAEEIEKHFGCQSSQ  276 (363)
Q Consensus       202 ~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi-~~I~~----~~kKP~p~~~~alk~lgl~pee  276 (363)
                      +.|++.+.+++++ +.|++++|+||++        ...++.+.+.+|+ +.+..    ...||.+....+.+.++  .++
T Consensus        73 ~~pga~e~L~~lk-~~G~~v~LaTas~--------~~~a~~i~~~lGlFd~Vigsd~~~~~kg~~K~~~l~~~l~--~~~  141 (479)
T PRK08238         73 YNEEVLDYLRAER-AAGRKLVLATASD--------ERLAQAVAAHLGLFDGVFASDGTTNLKGAAKAAALVEAFG--ERG  141 (479)
T ss_pred             CChhHHHHHHHHH-HCCCEEEEEeCCC--------HHHHHHHHHHcCCCCEEEeCCCccccCCchHHHHHHHHhC--ccC
Confidence            5689999999998 6899999999996        4678889999997 54431    23466554455556665  466


Q ss_pred             EEEEccCCcccHHHHHHcCCeEEEEcCCC
Q 017982          277 LIMVGDRPFTDIVYGNRNGFLTILTEPLS  305 (363)
Q Consensus       277 ~vmVGDrL~TDI~~A~raGi~TIlV~p~~  305 (363)
                      ++||||+. .|+.+++.+| ..+.|+|..
T Consensus       142 ~~yvGDS~-~Dlp~~~~A~-~av~Vn~~~  168 (479)
T PRK08238        142 FDYAGNSA-ADLPVWAAAR-RAIVVGASP  168 (479)
T ss_pred             eeEecCCH-HHHHHHHhCC-CeEEECCCH
Confidence            89999999 8999999999 889998764

>TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase

Probab=98.30  E-value=3.9e-06  Score=88.41  Aligned_cols=108  Identities=19%  Similarity=0.207  Sum_probs=85.1

Q ss_pred             HHHHcCCCEEEEcCCceeec--CCCCCcchhHHHHHHHHHHhCC-CeEEEEeCCCCCCCCCccHHHHHHHHHHhCCeEEE
Q 017982          177 ELQRRGFKGVVFDKDNTLTA--PYSLTLWGPLSSSIEQCKSVFG-HDIAVFSNSAGLYEYDNDASKARKLEGKIGIKVIR  253 (363)
Q Consensus       177 ~L~~~GIkaVV~DlDnTL~~--~~~~~~~p~v~e~L~~Lk~~~G-ikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~~I~  253 (363)
                      ...+.|.+.+.+..|+++..  .....++|++.+.|++|+ +.| ++++|+||..        ...++.+++.+|++.++
T Consensus       358 ~~~~~g~~~~~v~~~~~~~g~i~~~d~~~~g~~e~l~~L~-~~g~i~v~ivTgd~--------~~~a~~i~~~lgi~~~f  428 (556)
T TIGR01525       358 EGESQGKTVVFVAVDGELLGVIALRDQLRPEAKEAIAALK-RAGGIKLVMLTGDN--------RSAAEAVAAELGIDEVH  428 (556)
T ss_pred             HHhhCCcEEEEEEECCEEEEEEEecccchHhHHHHHHHHH-HcCCCeEEEEeCCC--------HHHHHHHHHHhCCCeee
Confidence            44567888888888887754  245678999999999998 579 9999999986        47788999999998665


Q ss_pred             cccCCCchhHHHHHHHhCCCCCcEEEEccCCcccHHHHHHcCC
Q 017982          254 HRVKKPAGTAEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGF  296 (363)
Q Consensus       254 ~~~kKP~p~~~~alk~lgl~pee~vmVGDrL~TDI~~A~raGi  296 (363)
                      ... .|... .+++++++..+++++||||.. .|+.+++++|+
T Consensus       429 ~~~-~p~~K-~~~v~~l~~~~~~v~~vGDg~-nD~~al~~A~v  468 (556)
T TIGR01525       429 AEL-LPEDK-LAIVKELQEEGGVVAMVGDGI-NDAPALAAADV  468 (556)
T ss_pred             ccC-CHHHH-HHHHHHHHHcCCEEEEEECCh-hHHHHHhhCCE
Confidence            332 34332 235566666778999999999 89999999994

This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512.

>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490

Probab=98.23  E-value=6.7e-06  Score=74.09  Aligned_cols=92  Identities=18%  Similarity=0.145  Sum_probs=70.4

Q ss_pred             CcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCeEEE-----c--c---cCCCc---------h
Q 017982          201 TLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKVIR-----H--R---VKKPA---------G  261 (363)
Q Consensus       201 ~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~~I~-----~--~---~kKP~---------p  261 (363)
                      .++|++.+.|+.++ +.|++++|+|++.        ...++.+++.+|++.++     .  .   .+|+.         .
T Consensus        87 ~~~~~~~~~l~~l~-~~g~~v~ivS~s~--------~~~v~~~~~~lg~~~~~~~~l~~~~~g~~~g~~~~~~~~g~~K~  157 (202)
T TIGR01490        87 ILYPEARDLIRWHK-AEGHTIVLVSASL--------TILVKPLARILGIDNAIGTRLEESEDGIYTGNIDGNNCKGEGKV  157 (202)
T ss_pred             hccHHHHHHHHHHH-HCCCEEEEEeCCc--------HHHHHHHHHHcCCcceEecceEEcCCCEEeCCccCCCCCChHHH
Confidence            57899999999998 5799999999996        36778888888886321     0  0   12211         1


Q ss_pred             -hHHHHHHHhCCCCCcEEEEccCCcccHHHHHHcCCeEEEEcC
Q 017982          262 -TAEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGFLTILTEP  303 (363)
Q Consensus       262 -~~~~alk~lgl~pee~vmVGDrL~TDI~~A~raGi~TIlV~p  303 (363)
                       .+.+++++.+++++++++|||+. +|+.++..+|.. ++|+|
T Consensus       158 ~~l~~~~~~~~~~~~~~~~~gDs~-~D~~~~~~a~~~-~~v~~  198 (202)
T TIGR01490       158 HALAELLAEEQIDLKDSYAYGDSI-SDLPLLSLVGHP-YVVNP  198 (202)
T ss_pred             HHHHHHHHHcCCCHHHcEeeeCCc-ccHHHHHhCCCc-EEeCC
Confidence             24667788899999999999999 899999999954 56655

A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.

>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase

Probab=98.21  E-value=8.7e-06  Score=86.08  Aligned_cols=106  Identities=17%  Similarity=0.176  Sum_probs=84.3

Q ss_pred             HHcCCCEEEEcCCceeecC--CCCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCeEEEccc
Q 017982          179 QRRGFKGVVFDKDNTLTAP--YSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKVIRHRV  256 (363)
Q Consensus       179 ~~~GIkaVV~DlDnTL~~~--~~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~~I~~~~  256 (363)
                      .+.|.+.+.++.|+++...  -...++|++.+++++|+ +.|++++|+||..        ...++.+++.+|+++. . .
T Consensus       381 ~~~g~~~~~~~~~~~~~g~~~~~d~l~~~a~e~i~~Lk-~~Gi~v~ilSgd~--------~~~a~~ia~~lgi~~~-~-~  449 (562)
T TIGR01511       381 AEQGSTSVLVAVNGELAGVFALEDQLRPEAKEVIQALK-RRGIEPVMLTGDN--------RKTAKAVAKELGINVR-A-E  449 (562)
T ss_pred             hhCCCEEEEEEECCEEEEEEEecccccHHHHHHHHHHH-HcCCeEEEEcCCC--------HHHHHHHHHHcCCcEE-c-c
Confidence            3578888999999998754  35678999999999998 5799999999986        4778899999999843 2 3


Q ss_pred             CCCchhHHHHHHHhCCCCCcEEEEccCCcccHHHHHHcCCe
Q 017982          257 KKPAGTAEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGFL  297 (363)
Q Consensus       257 kKP~p~~~~alk~lgl~pee~vmVGDrL~TDI~~A~raGi~  297 (363)
                      -+|... ..+++++..++++++||||.. .|+.+++++|+.
T Consensus       450 ~~p~~K-~~~v~~l~~~~~~v~~VGDg~-nD~~al~~A~vg  488 (562)
T TIGR01511       450 VLPDDK-AALIKELQEKGRVVAMVGDGI-NDAPALAQADVG  488 (562)
T ss_pred             CChHHH-HHHHHHHHHcCCEEEEEeCCC-ccHHHHhhCCEE
Confidence            355542 234455555788999999999 899999999973

One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification.

>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal

Probab=98.19  E-value=1.4e-05  Score=73.25  Aligned_cols=44  Identities=20%  Similarity=0.213  Sum_probs=38.0

Q ss_pred             CCEEEEcCCceeecCCCCCcchhHHHHHHHHHHhCCCeEEEEeCCC
Q 017982          183 FKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSA  228 (363)
Q Consensus       183 IkaVV~DlDnTL~~~~~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~  228 (363)
                      +|.|++|+|+||.. ....+.++..++|++|+ +.|++++|+|...
T Consensus         1 ik~v~~DlDGTLl~-~~~~i~~~~~~~i~~l~-~~g~~~~~~TGR~   44 (215)
T TIGR01487         1 IKLVAIDIDGTLTE-PNRMISERAIEAIRKAE-KKGIPVSLVTGNT   44 (215)
T ss_pred             CcEEEEecCCCcCC-CCcccCHHHHHHHHHHH-HCCCEEEEEcCCc
Confidence            57899999999985 44468899999999998 5799999999886

TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.

>KOG2914 consensus Predicted haloacid-halidohydrolase and related hydrolases [General function prediction only]

Probab=98.18  E-value=1e-05  Score=76.49  Aligned_cols=104  Identities=14%  Similarity=0.167  Sum_probs=79.5

Q ss_pred             CCCCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCeEEE----cccCCCch-hHHHHHHHhC
Q 017982          197 PYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKVIR----HRVKKPAG-TAEEIEKHFG  271 (363)
Q Consensus       197 ~~~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~~I~----~~~kKP~p-~~~~alk~lg  271 (363)
                      +......||+.+.++.|+ ..|++++++|+..... ++-.-++.+.+...++..+..    ...+||+| +|..+++.+|
T Consensus        88 ~~~~~~~PGa~kLv~~L~-~~gip~alat~s~~~~-~~~k~~~~~~~~~~f~~~v~~d~~~v~~gKP~Pdi~l~A~~~l~  165 (222)
T KOG2914|consen   88 FMNSILMPGAEKLVNHLK-NNGIPVALATSSTSAS-FELKISRHEDIFKNFSHVVLGDDPEVKNGKPDPDIYLKAAKRLG  165 (222)
T ss_pred             ccccccCCcHHHHHHHHH-hCCCCeeEEecCCccc-HHHHHHHhhHHHHhcCCCeecCCccccCCCCCchHHHHHHHhcC
Confidence            355567889999999998 6899999999996311 000012223355555555441    34579999 7899999999


Q ss_pred             CCC-CcEEEEccCCcccHHHHHHcCCeEEEEcC
Q 017982          272 CQS-SQLIMVGDRPFTDIVYGNRNGFLTILTEP  303 (363)
Q Consensus       272 l~p-ee~vmVGDrL~TDI~~A~raGi~TIlV~p  303 (363)
                      ..| +.|++++|.. .-|++|+.+||..|+|..
T Consensus       166 ~~~~~k~lVfeds~-~Gv~aa~aagm~vi~v~~  197 (222)
T KOG2914|consen  166 VPPPSKCLVFEDSP-VGVQAAKAAGMQVVGVAT  197 (222)
T ss_pred             CCCccceEEECCCH-HHHHHHHhcCCeEEEecC
Confidence            998 9999999999 799999999999999986

>PRK01158 phosphoglycolate phosphatase; Provisional

Probab=98.14  E-value=2.7e-05  Score=71.55  Aligned_cols=44  Identities=18%  Similarity=0.238  Sum_probs=37.0

Q ss_pred             CCEEEEcCCceeecCCCCCcchhHHHHHHHHHHhCCCeEEEEeCCC
Q 017982          183 FKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSA  228 (363)
Q Consensus       183 IkaVV~DlDnTL~~~~~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~  228 (363)
                      +|.+++|+|+||.. ....+.+...++|++|+ +.|++++|+|..+
T Consensus         3 ~kli~~DlDGTLl~-~~~~i~~~~~~al~~l~-~~G~~~~iaTGR~   46 (230)
T PRK01158          3 IKAIAIDIDGTITD-KDRRLSLKAVEAIRKAE-KLGIPVILATGNV   46 (230)
T ss_pred             eeEEEEecCCCcCC-CCCccCHHHHHHHHHHH-HCCCEEEEEcCCc
Confidence            68999999999985 34457889999999998 5799999888776

>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase

Probab=98.13  E-value=1.3e-05  Score=73.98  Aligned_cols=87  Identities=14%  Similarity=0.108  Sum_probs=66.4

Q ss_pred             CCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCC-eEEE----------cccCCCch-hH----
Q 017982          200 LTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGI-KVIR----------HRVKKPAG-TA----  263 (363)
Q Consensus       200 ~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi-~~I~----------~~~kKP~p-~~----  263 (363)
                      ..+.|++.+.|+.|+ +.|++++|+|++.        ...++.+++.++. ..+.          ....||.+ .+    
T Consensus        69 ~~l~pg~~e~l~~l~-~~g~~~~IvS~~~--------~~~i~~il~~~~~~~~i~~n~~~~~~~~~~~~~p~~~~~~~~~  139 (214)
T TIGR03333        69 AEIREGFREFVAFIN-EHGIPFYVISGGM--------DFFVYPLLEGIVEKDRIYCNEADFSNEYIHIDWPHPCDGTCQN  139 (214)
T ss_pred             CcccccHHHHHHHHH-HCCCeEEEECCCc--------HHHHHHHHHhhCCcccEEeceeEeeCCeeEEeCCCCCcccccc
Confidence            457899999999998 5799999999995        3566667766642 2221          12456765 22    


Q ss_pred             ------HHHHHHhCCCCCcEEEEccCCcccHHHHHHcCC
Q 017982          264 ------EEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGF  296 (363)
Q Consensus       264 ------~~alk~lgl~pee~vmVGDrL~TDI~~A~raGi  296 (363)
                            ..+++.++..+++++||||.. +|+.+|+.+|+
T Consensus       140 ~cg~~K~~~l~~~~~~~~~~i~iGDg~-~D~~~a~~Ad~  177 (214)
T TIGR03333       140 QCGCCKPSLIRKLSEPNDYHIVIGDSV-TDVEAAKQSDL  177 (214)
T ss_pred             CCCCCHHHHHHHHhhcCCcEEEEeCCH-HHHHHHHhCCe
Confidence                  367888888899999999999 89999999998

Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.

>TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase

Probab=98.08  E-value=1.4e-05  Score=83.92  Aligned_cols=107  Identities=19%  Similarity=0.198  Sum_probs=83.3

Q ss_pred             HHHcCCCEEEEcCCceeec--CCCCCcchhHHHHHHHHHHhCCC-eEEEEeCCCCCCCCCccHHHHHHHHHHhCCeEEEc
Q 017982          178 LQRRGFKGVVFDKDNTLTA--PYSLTLWGPLSSSIEQCKSVFGH-DIAVFSNSAGLYEYDNDASKARKLEGKIGIKVIRH  254 (363)
Q Consensus       178 L~~~GIkaVV~DlDnTL~~--~~~~~~~p~v~e~L~~Lk~~~Gi-kl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~~I~~  254 (363)
                      +...|...+.+..|+++..  .....++|++.+.|++|+ +.|+ +++|+||..        ...++.+++.+|++.++.
T Consensus       337 ~~~~~~~~~~v~~~~~~~g~i~~~d~l~~~~~e~i~~L~-~~Gi~~v~vvTgd~--------~~~a~~i~~~lgi~~~f~  407 (536)
T TIGR01512       337 PESAGKTIVHVARDGTYLGYILLSDEPRPDAAEAIAELK-ALGIEKVVMLTGDR--------RAVAERVARELGIDEVHA  407 (536)
T ss_pred             hhhCCCeEEEEEECCEEEEEEEEeccchHHHHHHHHHHH-HcCCCcEEEEcCCC--------HHHHHHHHHHcCChhhhh
Confidence            3455667777777777654  245578999999999998 6899 999999986        477889999999986543


Q ss_pred             ccCCCchhHHHHHHHhCCCCCcEEEEccCCcccHHHHHHcCC
Q 017982          255 RVKKPAGTAEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGF  296 (363)
Q Consensus       255 ~~kKP~p~~~~alk~lgl~pee~vmVGDrL~TDI~~A~raGi  296 (363)
                      . -.|... ..++++++...++++||||.. .|+.+++++|+
T Consensus       408 ~-~~p~~K-~~~i~~l~~~~~~v~~vGDg~-nD~~al~~A~v  446 (536)
T TIGR01512       408 E-LLPEDK-LEIVKELREKYGPVAMVGDGI-NDAPALAAADV  446 (536)
T ss_pred             c-cCcHHH-HHHHHHHHhcCCEEEEEeCCH-HHHHHHHhCCE
Confidence            2 345432 346677777779999999999 89999999996

.

>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family

Probab=98.08  E-value=1.7e-05  Score=76.35  Aligned_cols=106  Identities=11%  Similarity=0.145  Sum_probs=68.1

Q ss_pred             CCEEEEcCCceeecCCCCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCeEEEcccCCCchh
Q 017982          183 FKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKVIRHRVKKPAGT  262 (363)
Q Consensus       183 IkaVV~DlDnTL~~~~~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~~I~~~~kKP~p~  262 (363)
                      |+++++|+|+||.  .....+|++.++|++|+ +.|++++++||++..     .......-++.+|++.-....--+...
T Consensus         2 ~~~~~~D~DGtl~--~~~~~~~ga~e~l~~L~-~~g~~~~~~Tnns~~-----~~~~~~~~l~~~G~~~~~~~i~ts~~~   73 (279)
T TIGR01452         2 AQGFIFDCDGVLW--LGERVVPGAPELLDRLA-RAGKAALFVTNNSTK-----SRAEYALKFARLGFNGLAEQLFSSALC   73 (279)
T ss_pred             ccEEEEeCCCceE--cCCeeCcCHHHHHHHHH-HCCCeEEEEeCCCCC-----CHHHHHHHHHHcCCCCChhhEecHHHH
Confidence            7899999999995  45567899999999998 579999999998631     112222344667875321111111112


Q ss_pred             HHHHHHHhCCCCCcEEEEccCCcccHHHHHHcCCeE
Q 017982          263 AEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGFLT  298 (363)
Q Consensus       263 ~~~alk~lgl~pee~vmVGDrL~TDI~~A~raGi~T  298 (363)
                      +...++.......++.+||+.-.++..  ...|+..
T Consensus        74 ~~~~l~~~~~~~~~v~~iG~~~~~~~l--~~~g~~~  107 (279)
T TIGR01452        74 AARLLRQPPDAPKAVYVIGEEGLRAEL--DAAGIRL  107 (279)
T ss_pred             HHHHHHhhCcCCCEEEEEcCHHHHHHH--HHCCCEE
Confidence            344555544455789999997544443  4567653

This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.

>TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family

Probab=98.06  E-value=2.4e-05  Score=75.81  Aligned_cols=99  Identities=15%  Similarity=0.118  Sum_probs=66.3

Q ss_pred             CCCEEEEcCCceeec-------------------C------CCCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCcc
Q 017982          182 GFKGVVFDKDNTLTA-------------------P------YSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDND  236 (363)
Q Consensus       182 GIkaVV~DlDnTL~~-------------------~------~~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~  236 (363)
                      .-.+||+|+|.|+..                   |      ....++|++.++|+.|+ ..|++++|+||....     .
T Consensus        74 kp~AVV~DIDeTvLdns~y~~~~~~~~~~~~~~~w~~wv~~~~a~~ipGA~e~L~~L~-~~G~~v~iVTnR~~~-----~  147 (266)
T TIGR01533        74 KKYAIVLDLDETVLDNSPYQGYQVLNNKPFDPETWDKWVQAAQAKPVAGALDFLNYAN-SKGVKIFYVSNRSEK-----E  147 (266)
T ss_pred             CCCEEEEeCccccccChHHHHHHhcCCCcCCHHHHHHHHHcCCCCcCccHHHHHHHHH-HCCCeEEEEeCCCcc-----h
Confidence            346899999999842                   1      01136799999999998 579999999999631     1


Q ss_pred             HHHHHHHHHHhCCeE-----EEc-ccCCCch-hHHHHHHHhCCCCCcEEEEccCCcccHHHH
Q 017982          237 ASKARKLEGKIGIKV-----IRH-RVKKPAG-TAEEIEKHFGCQSSQLIMVGDRPFTDIVYG  291 (363)
Q Consensus       237 ~~~a~~i~~~LGi~~-----I~~-~~kKP~p-~~~~alk~lgl~pee~vmVGDrL~TDI~~A  291 (363)
                      ...+...++.+|++.     +.. ...++.+ ....+.+.+++    ++||||++ .|+..+
T Consensus       148 ~~~T~~~Lkk~Gi~~~~~d~lllr~~~~~K~~rr~~I~~~y~I----vl~vGD~~-~Df~~~  204 (266)
T TIGR01533       148 KAATLKNLKRFGFPQADEEHLLLKKDKSSKESRRQKVQKDYEI----VLLFGDNL-LDFDDF  204 (266)
T ss_pred             HHHHHHHHHHcCcCCCCcceEEeCCCCCCcHHHHHHHHhcCCE----EEEECCCH-HHhhhh
Confidence            234556677788863     221 1122222 34556565565    89999999 699653

which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles.

>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase

Probab=98.01  E-value=3e-05  Score=68.41  Aligned_cols=87  Identities=17%  Similarity=0.142  Sum_probs=59.6

Q ss_pred             CCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCeE----EEcc-------------cCC----
Q 017982          200 LTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKV----IRHR-------------VKK----  258 (363)
Q Consensus       200 ~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~~----I~~~-------------~kK----  258 (363)
                      ..++|++.+.|+.|+ +.|++++|+||+.        ...++.+++.+|+..    +...             ..+    
T Consensus        71 ~~l~~g~~~ll~~l~-~~g~~~~i~S~~~--------~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~g~~~~~~~~~~~~  141 (188)
T TIGR01489        71 APIDPGFKEFIAFIK-EHGIDFIVISDGN--------DFFIDPVLEGIGEKDVFIEIYSNPASFDNDGRHIVWPHHCHGC  141 (188)
T ss_pred             CCCCccHHHHHHHHH-HcCCcEEEEeCCc--------HHHHHHHHHHcCChhheeEEeccCceECCCCcEEEecCCCCcc
Confidence            457889999999998 5799999999996        356677777777641    2100             000    


Q ss_pred             -Cch-hH--HHHHHHhCCC-CCcEEEEccCCcccHHHHHHcCC
Q 017982          259 -PAG-TA--EEIEKHFGCQ-SSQLIMVGDRPFTDIVYGNRNGF  296 (363)
Q Consensus       259 -P~p-~~--~~alk~lgl~-pee~vmVGDrL~TDI~~A~raGi  296 (363)
                       +.+ ++  ..+++++.-. +++++||||.. +|+.+|+++++
T Consensus       142 ~~~~~g~~K~~~~~~~~~~~~~~~i~iGD~~-~D~~aa~~~d~  183 (188)
T TIGR01489       142 CSCPCGCCKGKVIHKLSEPKYQHIIYIGDGV-TDVCPAKLSDV  183 (188)
T ss_pred             CcCCCCCCHHHHHHHHHhhcCceEEEECCCc-chhchHhcCCc
Confidence             111 11  1233443333 89999999999 89999999865

Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.

>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A

Probab=98.00  E-value=1.8e-05  Score=65.66  Aligned_cols=100  Identities=17%  Similarity=0.158  Sum_probs=61.0

Q ss_pred             EEEcCCceeecCCCCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCeEEEcccCCCchhHHH
Q 017982          186 VVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKVIRHRVKKPAGTAEE  265 (363)
Q Consensus       186 VV~DlDnTL~~~~~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~~I~~~~kKP~p~~~~  265 (363)
                      +++|+|+||.  ....+.|++.++|++|+ +.|++++++||++...     .......++.+|+++-....--|......
T Consensus         1 ~l~D~dGvl~--~g~~~ipga~e~l~~L~-~~g~~~~~lTNns~~s-----~~~~~~~L~~~Gi~~~~~~i~ts~~~~~~   72 (101)
T PF13344_consen    1 FLFDLDGVLY--NGNEPIPGAVEALDALR-ERGKPVVFLTNNSSRS-----REEYAKKLKKLGIPVDEDEIITSGMAAAE   72 (101)
T ss_dssp             EEEESTTTSE--ETTEE-TTHHHHHHHHH-HTTSEEEEEES-SSS------HHHHHHHHHHTTTT--GGGEEEHHHHHHH
T ss_pred             CEEeCccEeE--eCCCcCcCHHHHHHHHH-HcCCCEEEEeCCCCCC-----HHHHHHHHHhcCcCCCcCEEEChHHHHHH
Confidence            5899999995  56678999999999998 5799999999997422     23334444788987311001112222233


Q ss_pred             HHHHhCCCCCcEEEEccCCcccHHHHHHcCC
Q 017982          266 IEKHFGCQSSQLIMVGDRPFTDIVYGNRNGF  296 (363)
Q Consensus       266 alk~lgl~pee~vmVGDrL~TDI~~A~raGi  296 (363)
                      .+++. ....++.+||-.-  .....+.+|+
T Consensus        73 ~l~~~-~~~~~v~vlG~~~--l~~~l~~~G~  100 (101)
T PF13344_consen   73 YLKEH-KGGKKVYVLGSDG--LREELREAGF  100 (101)
T ss_dssp             HHHHH-TTSSEEEEES-HH--HHHHHHHTTE
T ss_pred             HHHhc-CCCCEEEEEcCHH--HHHHHHHcCC
Confidence            33432 3467888888763  4555555654

...

>PRK10671 copA copper exporting ATPase; Provisional

Probab=97.96  E-value=6.1e-05  Score=83.10  Aligned_cols=109  Identities=19%  Similarity=0.245  Sum_probs=87.3

Q ss_pred             HHHHHcCCCEEEEcCCceeec--CCCCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCeEEE
Q 017982          176 AELQRRGFKGVVFDKDNTLTA--PYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKVIR  253 (363)
Q Consensus       176 ~~L~~~GIkaVV~DlDnTL~~--~~~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~~I~  253 (363)
                      +.+.+.|.+.+.+-.|+.+..  .....+.|++.+.|++|+ +.|++++++|+..        ...++.+.+.+|++.++
T Consensus       623 ~~~~~~g~~~v~va~~~~~~g~~~l~d~~r~~a~~~i~~L~-~~gi~v~~~Tgd~--------~~~a~~ia~~lgi~~~~  693 (834)
T PRK10671        623 TAQASQGATPVLLAVDGKAAALLAIRDPLRSDSVAALQRLH-KAGYRLVMLTGDN--------PTTANAIAKEAGIDEVI  693 (834)
T ss_pred             HHHHhCCCeEEEEEECCEEEEEEEccCcchhhHHHHHHHHH-HCCCeEEEEcCCC--------HHHHHHHHHHcCCCEEE
Confidence            345678988888888888753  245678899999999998 6799999999985        46778899999998665


Q ss_pred             cccCCCchhHHHHHHHhCCCCCcEEEEccCCcccHHHHHHcCC
Q 017982          254 HRVKKPAGTAEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGF  296 (363)
Q Consensus       254 ~~~kKP~p~~~~alk~lgl~pee~vmVGDrL~TDI~~A~raGi  296 (363)
                      ... .|... .++++.++..+++++||||.. .|+.+++++|+
T Consensus       694 ~~~-~p~~K-~~~i~~l~~~~~~v~~vGDg~-nD~~al~~Agv  733 (834)
T PRK10671        694 AGV-LPDGK-AEAIKRLQSQGRQVAMVGDGI-NDAPALAQADV  733 (834)
T ss_pred             eCC-CHHHH-HHHHHHHhhcCCEEEEEeCCH-HHHHHHHhCCe
Confidence            332 45432 357777888889999999999 79999999999

>COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism]

Probab=97.93  E-value=5.5e-05  Score=70.77  Aligned_cols=94  Identities=16%  Similarity=0.240  Sum_probs=72.9

Q ss_pred             CCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCeEEE------c-----------ccCCCch-
Q 017982          200 LTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKVIR------H-----------RVKKPAG-  261 (363)
Q Consensus       200 ~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~~I~------~-----------~~kKP~p-  261 (363)
                      ..++|++.+.++.++ ..|++++|+|.+.        ...++.+.+.+|++...      .           -+..... 
T Consensus        76 ~~l~~ga~elv~~lk-~~G~~v~iiSgg~--------~~lv~~ia~~lg~d~~~an~l~~~dG~ltG~v~g~~~~~~~K~  146 (212)
T COG0560          76 LRLTPGAEELVAALK-AAGAKVVIISGGF--------TFLVEPIAERLGIDYVVANELEIDDGKLTGRVVGPICDGEGKA  146 (212)
T ss_pred             CcCCccHHHHHHHHH-HCCCEEEEEcCCh--------HHHHHHHHHHhCCchheeeEEEEeCCEEeceeeeeecCcchHH
Confidence            346888999999998 6899999999995        36789999999987321      0           1222222 


Q ss_pred             -hHHHHHHHhCCCCCcEEEEccCCcccHHHHHHcCCeEEEEcCC
Q 017982          262 -TAEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGFLTILTEPL  304 (363)
Q Consensus       262 -~~~~alk~lgl~pee~vmVGDrL~TDI~~A~raGi~TIlV~p~  304 (363)
                       ...+.++.+|+++++++.|||+. .|+.+=..+|.. +.++|.
T Consensus       147 ~~l~~~~~~~g~~~~~~~a~gDs~-nDlpml~~ag~~-ia~n~~  188 (212)
T COG0560         147 KALRELAAELGIPLEETVAYGDSA-NDLPMLEAAGLP-IAVNPK  188 (212)
T ss_pred             HHHHHHHHHcCCCHHHeEEEcCch-hhHHHHHhCCCC-eEeCcC
Confidence             24678888999999999999999 899999999965 556554

>KOG3109 consensus Haloacid dehalogenase-like hydrolase [General function prediction only]

Probab=97.93  E-value=3.5e-05  Score=72.73  Aligned_cols=94  Identities=22%  Similarity=0.194  Sum_probs=76.3

Q ss_pred             CCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCeE-----EE-c--------ccCCCch-hHH
Q 017982          200 LTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKV-----IR-H--------RVKKPAG-TAE  264 (363)
Q Consensus       200 ~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~~-----I~-~--------~~kKP~p-~~~  264 (363)
                      ..+-+.+++.|-.|++ .  +.+|.||.+        ...|.++++.+|+.-     ++ .        -+-||.+ .|+
T Consensus        99 LkPD~~LRnlLL~l~~-r--~k~~FTNa~--------k~HA~r~Lk~LGieDcFegii~~e~~np~~~~~vcKP~~~afE  167 (244)
T KOG3109|consen   99 LKPDPVLRNLLLSLKK-R--RKWIFTNAY--------KVHAIRILKKLGIEDCFEGIICFETLNPIEKTVVCKPSEEAFE  167 (244)
T ss_pred             cCCCHHHHHHHHhCcc-c--cEEEecCCc--------HHHHHHHHHHhChHHhccceeEeeccCCCCCceeecCCHHHHH
Confidence            4566778888888873 2  389999996        478889999999861     21 0        1458998 689


Q ss_pred             HHHHHhCCC-CCcEEEEccCCcccHHHHHHcCCeEEEEcCCC
Q 017982          265 EIEKHFGCQ-SSQLIMVGDRPFTDIVYGNRNGFLTILTEPLS  305 (363)
Q Consensus       265 ~alk~lgl~-pee~vmVGDrL~TDI~~A~raGi~TIlV~p~~  305 (363)
                      .+++..|++ |.+++++.|+. ..|+.|++.|++|++|....
T Consensus       168 ~a~k~agi~~p~~t~FfDDS~-~NI~~ak~vGl~tvlv~~~~  208 (244)
T KOG3109|consen  168 KAMKVAGIDSPRNTYFFDDSE-RNIQTAKEVGLKTVLVGREH  208 (244)
T ss_pred             HHHHHhCCCCcCceEEEcCch-hhHHHHHhccceeEEEEeee
Confidence            999999998 99999999999 78999999999999997544

>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily

Probab=97.89  E-value=0.00012  Score=66.85  Aligned_cols=35  Identities=20%  Similarity=0.405  Sum_probs=31.8

Q ss_pred             hHHHHHHHhCCCCCcEEEEccCCcccHHHHHHcCCe
Q 017982          262 TAEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGFL  297 (363)
Q Consensus       262 ~~~~alk~lgl~pee~vmVGDrL~TDI~~A~raGi~  297 (363)
                      ++..+++++|++++++++|||+. +|+.+.+.+|..
T Consensus       153 ~i~~l~~~~~i~~~~~i~~GD~~-NDi~m~~~ag~~  187 (225)
T TIGR01482       153 AVKKLKEKLGIKPGETLVCGDSE-NDIDLFEVPGFG  187 (225)
T ss_pred             HHHHHHHHhCCCHHHEEEECCCH-hhHHHHHhcCce
Confidence            36788899999999999999998 899999999975

catalyze the same reaction as SPP.

>TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544

Probab=97.84  E-value=0.00011  Score=71.82  Aligned_cols=86  Identities=12%  Similarity=0.130  Sum_probs=65.5

Q ss_pred             CCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCe----EE------E----cccCCCch---
Q 017982          199 SLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK----VI------R----HRVKKPAG---  261 (363)
Q Consensus       199 ~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~----~I------~----~~~kKP~p---  261 (363)
                      ...+.|++.++++.|+ +.|++++|+|++.        ...++.+++.+|+.    .+      +    ...++|.|   
T Consensus       119 ~l~l~pG~~efl~~L~-~~GIpv~IvS~G~--------~~~Ie~vL~~lgl~~~~~~IvSN~L~f~~dGvltG~~~P~i~  189 (277)
T TIGR01544       119 DVMLKDGYENFFDKLQ-QHSIPVFIFSAGI--------GNVLEEVLRQAGVYHPNVKVVSNFMDFDEDGVLKGFKGPLIH  189 (277)
T ss_pred             CCccCcCHHHHHHHHH-HCCCcEEEEeCCc--------HHHHHHHHHHcCCCCcCceEEeeeEEECCCCeEeCCCCCccc
Confidence            4556899999999998 6899999999996        36788888888872    22      1    12356666   


Q ss_pred             ------hH-HHHHHHhC--CCCCcEEEEccCCcccHHHHHHc
Q 017982          262 ------TA-EEIEKHFG--CQSSQLIMVGDRPFTDIVYGNRN  294 (363)
Q Consensus       262 ------~~-~~alk~lg--l~pee~vmVGDrL~TDI~~A~ra  294 (363)
                            .. ..+.+.++  .++++|+||||.. +|+.+|.-.
T Consensus       190 ~~~K~~~v~~~~~~~~~~~~~~~~vI~vGDs~-~Dl~ma~g~  230 (277)
T TIGR01544       190 TFNKNHDVALRNTEYFNQLKDRSNIILLGDSQ-GDLRMADGV  230 (277)
T ss_pred             ccccHHHHHHHHHHHhCccCCcceEEEECcCh-hhhhHhcCC
Confidence                  22 24556777  8999999999999 899997644

This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.

>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like

Probab=97.77  E-value=7.8e-05  Score=65.38  Aligned_cols=84  Identities=18%  Similarity=0.123  Sum_probs=62.4

Q ss_pred             CcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCeEEE-----c-c----cC----CCch-----
Q 017982          201 TLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKVIR-----H-R----VK----KPAG-----  261 (363)
Q Consensus       201 ~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~~I~-----~-~----~k----KP~p-----  261 (363)
                      .+.|++.+.++.++ +.|++++|+|++.        ...++.+++.+|++.++     . .    .+    +|.+     
T Consensus        73 ~~~~g~~~~l~~l~-~~g~~~~ivS~~~--------~~~i~~~~~~~g~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~K  143 (177)
T TIGR01488        73 ALRPGARELISWLK-ERGIDTVIVSGGF--------DFFVEPVAEKLGIDDVFANRLEFDDNGLLTGPIEGQVNPEGECK  143 (177)
T ss_pred             CcCcCHHHHHHHHH-HCCCEEEEECCCc--------HHHHHHHHHHcCCchheeeeEEECCCCEEeCccCCcccCCcchH
Confidence            45789999999998 5799999999996        35677888888876321     0 0    11    1221     


Q ss_pred             --hHHHHHHHhCCCCCcEEEEccCCcccHHHHHHc
Q 017982          262 --TAEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRN  294 (363)
Q Consensus       262 --~~~~alk~lgl~pee~vmVGDrL~TDI~~A~ra  294 (363)
                        .+.++++.++++++++++|||+. +|+.+++.+
T Consensus       144 ~~~l~~~~~~~~~~~~~~~~iGDs~-~D~~~~~~a  177 (177)
T TIGR01488       144 GKVLKELLEESKITLKKIIAVGDSV-NDLPMLKLA  177 (177)
T ss_pred             HHHHHHHHHHhCCCHHHEEEEeCCH-HHHHHHhcC
Confidence              24566677889999999999998 899998753

Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.

>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein

Probab=97.75  E-value=0.00015  Score=67.17  Aligned_cols=89  Identities=11%  Similarity=0.055  Sum_probs=65.7

Q ss_pred             CCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCeEEEc--------c-------cCCCchh-H
Q 017982          200 LTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKVIRH--------R-------VKKPAGT-A  263 (363)
Q Consensus       200 ~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~~I~~--------~-------~kKP~p~-~  263 (363)
                      ..++|++.++|+.+++ .| +++|+|++.        ...++.+++.+|++.++.        +       ..||.+. .
T Consensus        67 i~l~pga~ell~~lk~-~~-~~~IVS~~~--------~~~~~~il~~lgi~~~~an~l~~~~~g~~tG~~~~~~~~K~~~  136 (203)
T TIGR02137        67 LKPLEGAVEFVDWLRE-RF-QVVILSDTF--------YEFSQPLMRQLGFPTLLCHKLEIDDSDRVVGYQLRQKDPKRQS  136 (203)
T ss_pred             CCCCccHHHHHHHHHh-CC-eEEEEeCCh--------HHHHHHHHHHcCCchhhceeeEEecCCeeECeeecCcchHHHH
Confidence            4679999999999985 45 999999996        367888999999874321        1       2344442 2


Q ss_pred             HHHHHHhCCCCCcEEEEccCCcccHHHHHHcCCeEEEEc
Q 017982          264 EEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGFLTILTE  302 (363)
Q Consensus       264 ~~alk~lgl~pee~vmVGDrL~TDI~~A~raGi~TIlV~  302 (363)
                      .+.++..+   .++++|||.. +|+.++..+|+..++-.
T Consensus       137 l~~l~~~~---~~~v~vGDs~-nDl~ml~~Ag~~ia~~a  171 (203)
T TIGR02137       137 VIAFKSLY---YRVIAAGDSY-NDTTMLSEAHAGILFHA  171 (203)
T ss_pred             HHHHHhhC---CCEEEEeCCH-HHHHHHHhCCCCEEecC
Confidence            33334544   3899999999 89999999999876654

This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).

>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional

Probab=97.60  E-value=0.00051  Score=75.16  Aligned_cols=108  Identities=19%  Similarity=0.233  Sum_probs=83.3

Q ss_pred             HHHHHcCCCEEEEcCCceeec--CCCCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCeEEE
Q 017982          176 AELQRRGFKGVVFDKDNTLTA--PYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKVIR  253 (363)
Q Consensus       176 ~~L~~~GIkaVV~DlDnTL~~--~~~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~~I~  253 (363)
                      +.+.+.|.+++.+-.|+++..  .-...+.|++.+.+++|+ +.|++++++|+..        ...++.+.+.+|+++..
T Consensus       541 ~~~~~~g~~~v~va~~~~~~g~i~l~d~~r~~a~~~i~~L~-~~gi~~~llTGd~--------~~~a~~ia~~lgi~~~~  611 (741)
T PRK11033        541 NELESAGKTVVLVLRNDDVLGLIALQDTLRADARQAISELK-ALGIKGVMLTGDN--------PRAAAAIAGELGIDFRA  611 (741)
T ss_pred             HHHHhCCCEEEEEEECCEEEEEEEEecCCchhHHHHHHHHH-HCCCEEEEEcCCC--------HHHHHHHHHHcCCCeec
Confidence            356678999888888888764  245678999999999998 5899999999985        47889999999998653


Q ss_pred             cccCCCchhHHHHHHHhCCCCCcEEEEccCCcccHHHHHHcCCe
Q 017982          254 HRVKKPAGTAEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGFL  297 (363)
Q Consensus       254 ~~~kKP~p~~~~alk~lgl~pee~vmVGDrL~TDI~~A~raGi~  297 (363)
                        .-.|.... .+++.++ .++.++||||.+ .|+.+.+.+++.
T Consensus       612 --~~~p~~K~-~~v~~l~-~~~~v~mvGDgi-NDapAl~~A~vg  650 (741)
T PRK11033        612 --GLLPEDKV-KAVTELN-QHAPLAMVGDGI-NDAPAMKAASIG  650 (741)
T ss_pred             --CCCHHHHH-HHHHHHh-cCCCEEEEECCH-HhHHHHHhCCee
Confidence              23454322 2445555 346899999999 899999999843

>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457

Probab=97.59  E-value=0.00039  Score=66.01  Aligned_cols=60  Identities=12%  Similarity=0.121  Sum_probs=46.4

Q ss_pred             CCEEEEcCCceeecCCCCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCe
Q 017982          183 FKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK  250 (363)
Q Consensus       183 IkaVV~DlDnTL~~~~~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~  250 (363)
                      ++++++|+|+||..  .....|++.++|++|+ +.|++++++||+.+..     ...+...++.+|++
T Consensus         1 ~~~~~~D~DGtl~~--~~~~i~~a~~~l~~l~-~~g~~~~~~Tnn~~r~-----~~~~~~~l~~~g~~   60 (249)
T TIGR01457         1 YKGYLIDLDGTMYK--GKERIPEAETFVHELQ-KRDIPYLFVTNNSTRT-----PESVAEMLASFDIP   60 (249)
T ss_pred             CCEEEEeCCCceEc--CCeeCcCHHHHHHHHH-HCCCeEEEEeCCCCCC-----HHHHHHHHHHcCCC
Confidence            57899999999964  4456789999999998 5799999999987422     34455566677775

This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.

>TIGR01684 viral_ppase viral phosphatase

Probab=97.55  E-value=0.00022  Score=70.18  Aligned_cols=60  Identities=20%  Similarity=0.160  Sum_probs=48.9

Q ss_pred             CCCEEEEcCCceeecCCCC-Cc-chhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCe
Q 017982          182 GFKGVVFDKDNTLTAPYSL-TL-WGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK  250 (363)
Q Consensus       182 GIkaVV~DlDnTL~~~~~~-~~-~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~  250 (363)
                      -.++++||+|+||...... .+ .|++.++|++|+ +.|++++|+||+.        ...+...++.+|+.
T Consensus       125 ~~kvIvFDLDgTLi~~~~~v~irdPgV~EaL~~Lk-ekGikLaIaTS~~--------Re~v~~~L~~lGLd  186 (301)
T TIGR01684       125 PPHVVVFDLDSTLITDEEPVRIRDPRIYDSLTELK-KRGCILVLWSYGD--------RDHVVESMRKVKLD  186 (301)
T ss_pred             cceEEEEecCCCCcCCCCccccCCHHHHHHHHHHH-HCCCEEEEEECCC--------HHHHHHHHHHcCCC
Confidence            3578999999999864321 13 599999999998 6799999999996        36777889999987

These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade.

>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458

Probab=97.54  E-value=0.00032  Score=66.96  Aligned_cols=62  Identities=11%  Similarity=0.104  Sum_probs=46.5

Q ss_pred             CCEEEEcCCceeecCCC--CCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCe
Q 017982          183 FKGVVFDKDNTLTAPYS--LTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK  250 (363)
Q Consensus       183 IkaVV~DlDnTL~~~~~--~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~  250 (363)
                      ++++++|+|+||.....  ..+.|++.++|++|+ +.|++++++||++...     ...+...++.+|++
T Consensus         1 ~k~i~~D~DGtl~~~~~~~~~~~~~a~~al~~l~-~~G~~~~~~Tn~~~~~-----~~~~~~~l~~~g~~   64 (257)
T TIGR01458         1 VKGVLLDISGVLYISDAKSGVAVPGSQEAVKRLR-GASVKVRFVTNTTKES-----KQDLLERLQRLGFD   64 (257)
T ss_pred             CCEEEEeCCCeEEeCCCcccCcCCCHHHHHHHHH-HCCCeEEEEECCCCCC-----HHHHHHHHHHcCCC
Confidence            57899999999964222  127899999999998 5799999999997421     23445555667775

This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.

>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]

Probab=97.51  E-value=0.00077  Score=65.62  Aligned_cols=63  Identities=17%  Similarity=0.258  Sum_probs=48.3

Q ss_pred             cCCCEEEEcCCceeecCCCCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCe
Q 017982          181 RGFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK  250 (363)
Q Consensus       181 ~GIkaVV~DlDnTL~~~~~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~  250 (363)
                      ..++++++|+|+||.  .....+|++.++|++|+ +.|++++++||++...+    ...++++....+++
T Consensus         6 ~~y~~~l~DlDGvl~--~G~~~ipga~e~l~~L~-~~g~~~iflTNn~~~s~----~~~~~~L~~~~~~~   68 (269)
T COG0647           6 DKYDGFLFDLDGVLY--RGNEAIPGAAEALKRLK-AAGKPVIFLTNNSTRSR----EVVAARLSSLGGVD   68 (269)
T ss_pred             hhcCEEEEcCcCceE--eCCccCchHHHHHHHHH-HcCCeEEEEeCCCCCCH----HHHHHHHHhhcCCC
Confidence            367899999999995  77888999999999998 68999999999985321    22444554435553

>TIGR00685 T6PP trehalose-phosphatase

Probab=97.45  E-value=0.00085  Score=63.32  Aligned_cols=40  Identities=18%  Similarity=0.091  Sum_probs=35.5

Q ss_pred             hHHHHHHHhCCCCCcEEEEccCCcccHHHHHHc-------CCeEEEEc
Q 017982          262 TAEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRN-------GFLTILTE  302 (363)
Q Consensus       262 ~~~~alk~lgl~pee~vmVGDrL~TDI~~A~ra-------Gi~TIlV~  302 (363)
                      .+..+++.++..+.+++||||+. ||+.+++.+       |..+|.|.
T Consensus       171 a~~~~~~~~~~~~~~~i~iGD~~-~D~~~~~~~~~~~~~~g~~~v~v~  217 (244)
T TIGR00685       171 IVKRLLWHQPGSGISPVYLGDDI-TDEDAFRVVNNQWGNYGFYPVPIG  217 (244)
T ss_pred             HHHHHHHhcccCCCceEEEcCCC-cHHHHHHHHhcccCCCCeEEEEEe
Confidence            35788888899999999999998 899999988       78899995

At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes.

>PRK10444 UMP phosphatase; Provisional

Probab=97.45  E-value=0.00052  Score=65.53  Aligned_cols=60  Identities=13%  Similarity=0.108  Sum_probs=45.5

Q ss_pred             CCEEEEcCCceeecCCCCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCe
Q 017982          183 FKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK  250 (363)
Q Consensus       183 IkaVV~DlDnTL~~~~~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~  250 (363)
                      |+.+++|+|+||..  ...+.|++.++++.|+ +.|.+++++||+....     ......-++.+|++
T Consensus         1 ~~~v~~DlDGtL~~--~~~~~p~a~~~l~~L~-~~g~~~~~~Tn~~~~~-----~~~~~~~l~~~G~~   60 (248)
T PRK10444          1 IKNVICDIDGVLMH--DNVAVPGAAEFLHRIL-DKGLPLVLLTNYPSQT-----GQDLANRFATAGVD   60 (248)
T ss_pred             CcEEEEeCCCceEe--CCeeCccHHHHHHHHH-HCCCeEEEEeCCCCCC-----HHHHHHHHHHcCCC
Confidence            67899999999964  4478999999999998 5799999999997421     22333334566774

>KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism]

Probab=97.40  E-value=0.00059  Score=63.68  Aligned_cols=81  Identities=17%  Similarity=0.178  Sum_probs=60.8

Q ss_pred             CCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCeE--EE------------c----------c
Q 017982          200 LTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKV--IR------------H----------R  255 (363)
Q Consensus       200 ~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~~--I~------------~----------~  255 (363)
                      ..+.|++.+....|+ +.|..++++|..-        ...+..+...|||++  ++            .          +
T Consensus        87 ~~lT~Gi~eLv~~L~-~~~~~v~liSGGF--------~~~i~~Va~~Lgi~~~n~yAN~l~fd~~Gk~~gfd~~~ptsds  157 (227)
T KOG1615|consen   87 PTLTPGIRELVSRLH-ARGTQVYLISGGF--------RQLIEPVAEQLGIPKSNIYANELLFDKDGKYLGFDTNEPTSDS  157 (227)
T ss_pred             CccCCCHHHHHHHHH-HcCCeEEEEcCCh--------HHHHHHHHHHhCCcHhhhhhheeeeccCCcccccccCCccccC
Confidence            357899999999998 6799999999884        478889999999985  22            0          1


Q ss_pred             cCCCchhHHHHHHHhCCCCCcEEEEccCCcccHHHHHH
Q 017982          256 VKKPAGTAEEIEKHFGCQSSQLIMVGDRPFTDIVYGNR  293 (363)
Q Consensus       256 ~kKP~p~~~~alk~lgl~pee~vmVGDrL~TDI~~A~r  293 (363)
                      .+|+.. +..+ ++ +.+.+.++||||-- ||+.+..-
T Consensus       158 ggKa~~-i~~l-rk-~~~~~~~~mvGDGa-tDlea~~p  191 (227)
T KOG1615|consen  158 GGKAEV-IALL-RK-NYNYKTIVMVGDGA-TDLEAMPP  191 (227)
T ss_pred             CccHHH-HHHH-Hh-CCChheeEEecCCc-cccccCCc
Confidence            234332 2223 23 88999999999998 99988655

>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA

Probab=97.32  E-value=0.00082  Score=63.27  Aligned_cols=58  Identities=17%  Similarity=0.294  Sum_probs=43.8

Q ss_pred             EEEcCCceeecCCCCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCe
Q 017982          186 VVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK  250 (363)
Q Consensus       186 VV~DlDnTL~~~~~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~  250 (363)
                      ++||+|+||.  .....+|++.++|+.++ ..|+++.++||+.+..    ....++.+.+.+|++
T Consensus         1 ~lfD~DGvL~--~~~~~~~~a~e~i~~l~-~~g~~~~~~tN~~~~~----~~~~~~~l~~~~g~~   58 (236)
T TIGR01460         1 FLFDIDGVLW--LGHKPIPGAAEALNRLR-AKGKPVVFLTNNSSRS----EEDYAEKLSSLLGVD   58 (236)
T ss_pred             CEEeCcCccC--cCCccCcCHHHHHHHHH-HCCCeEEEEECCCCCC----HHHHHHHHHHhcCCC
Confidence            4799999995  45667899999999998 5799999999998522    233445555546765

Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.

>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase

Probab=97.31  E-value=0.0024  Score=60.13  Aligned_cols=41  Identities=15%  Similarity=0.206  Sum_probs=36.1

Q ss_pred             hHHHHHHHhCCCCCcEEEEccCCcccHHHHHHcCCeEEEEcC
Q 017982          262 TAEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGFLTILTEP  303 (363)
Q Consensus       262 ~~~~alk~lgl~pee~vmVGDrL~TDI~~A~raGi~TIlV~p  303 (363)
                      +++.+++.+|++++++++|||+. .|+.+.+.+|..++.|.-
T Consensus       171 al~~l~~~~~i~~~~~i~~GD~~-ND~~ml~~~~~~~va~~n  211 (249)
T TIGR01485       171 ALQYLLQKLAMEPSQTLVCGDSG-NDIELFEIGSVRGVIVSN  211 (249)
T ss_pred             HHHHHHHHcCCCccCEEEEECCh-hHHHHHHccCCcEEEECC
Confidence            45788899999999999999999 799999998888888853

Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.

>PF05761 5_nucleotid: 5' nucleotidase family; InterPro: IPR008380 This family includes a 5'-nucleotidase, 3

Probab=97.29  E-value=0.0016  Score=67.64  Aligned_cols=96  Identities=19%  Similarity=0.301  Sum_probs=60.1

Q ss_pred             chhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHH-hCC------e------EEEcccCCC----------
Q 017982          203 WGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGK-IGI------K------VIRHRVKKP----------  259 (363)
Q Consensus       203 ~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~-LGi------~------~I~~~~kKP----------  259 (363)
                      .|.+..||++|+ +.|.+++++||+.        -..+..++.- +|-      +      +|...++||          
T Consensus       185 ~~~l~~~L~~lr-~~GKklFLiTNS~--------~~yt~~~M~yl~g~~~~~~~dW~dlFDvVIv~A~KP~FF~~~~pfr  255 (448)
T PF05761_consen  185 DPKLPPWLERLR-SAGKKLFLITNSP--------FDYTNAVMSYLLGPFLGEDPDWRDLFDVVIVDARKPGFFTEGRPFR  255 (448)
T ss_dssp             -CHHHHHHHHHH-CCT-EEEEE-SS---------HHHHHHHHHHHCGCCSSTTT-GGGCECEEEES--CCHHHCT---EE
T ss_pred             CchHHHHHHHHH-hcCceEEEecCCC--------CchhhhhhhhccCCCCCCCCChhhheeEEEEcCCCCcccCCCCceE
Confidence            467889999999 6899999999996        2334333332 333      1      222112222          


Q ss_pred             --------------------ch----h-HHHHHHHhCCCCCcEEEEccCCcccHHHHHHc-CCeEEEEcCCCCC
Q 017982          260 --------------------AG----T-AEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRN-GFLTILTEPLSLA  307 (363)
Q Consensus       260 --------------------~p----~-~~~alk~lgl~pee~vmVGDrL~TDI~~A~ra-Gi~TIlV~p~~~~  307 (363)
                                          ..    + ...+.+.+|....++++|||.++.||...+.. |.+|++|-|--..
T Consensus       256 ~vd~~~g~l~~~~~~~~l~~g~vY~gGn~~~l~~ll~~~g~~VLY~GDhi~~Di~~~k~~~gWrT~~Ii~ELe~  329 (448)
T PF05761_consen  256 EVDTETGKLKWGKYVGPLEKGKVYSGGNWDQLHKLLGWRGKEVLYFGDHIYGDILKSKKRHGWRTAAIIPELEQ  329 (448)
T ss_dssp             EEETTTSSEECS---SS--TC-EEEE--HHHHHHHCT--GGGEEEEESSTTTTHHHHHHHH-SEEEEE-TTHHH
T ss_pred             EEECCCCccccccccccccCCCEeecCCHHHHHHHHccCCCeEEEECCchhhhhhhhccccceEEEEEehhhhh
Confidence                                11    1 35677778888899999999999999999876 9999999876544

1.3.5 from EC, specific for purines (IMP and GMP) []. These enzymes are members of the Haloacid Dehalogenase (HAD) superfamily. HAD members are recognised by three short motifs {hhhhDxDx(T/V)}, {hhhh(T/S)}, and either {hhhh(D/E)(D/E)x(3-4)(G/N)} or {hhhh(G/N)(D/E)x(3-4)(D/E)} (where "h" stands for a hydrophobic residue). Crystal structures of many HAD enzymes has verified PSI-PRED predictions of secondary structural elements which show each of the "hhhh" sequences of the motifs as part of beta sheets. This subfamily of enzymes is part of "Subfamily I" of the HAD superfamily by virtue of a "cap" domain in between motifs 1 and 2. This subfamily's cap domain has a different predicted secondary structure than all other known HAD enzymes and thus has been designated "subfamily IG", the domain appears to consist of a mixed alpha/beta fold.; PDB: 2BDE_A 2XCW_A 2XCX_A 2XCV_A 2XJB_A 2JCM_A 2XJE_A 2J2C_A 2XJF_A 2XJD_A ....

>TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase

Probab=97.27  E-value=0.0014  Score=73.01  Aligned_cols=110  Identities=15%  Similarity=0.167  Sum_probs=80.2

Q ss_pred             HHHHHcCCCEEEEcCCc-----eeec--CCCCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhC
Q 017982          176 AELQRRGFKGVVFDKDN-----TLTA--PYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIG  248 (363)
Q Consensus       176 ~~L~~~GIkaVV~DlDn-----TL~~--~~~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LG  248 (363)
                      +.+.+.|.+++.+-.++     ++..  .-...+.|++.++++.|+ +.|+++.++|+..        ...+..+.+.+|
T Consensus       496 ~~~a~~G~rvl~~A~~~~~~~l~~lGli~l~Dp~r~~~~~~i~~l~-~~Gi~v~miTGD~--------~~tA~~ia~~~G  566 (884)
T TIGR01522       496 AEMASAGLRVIAFASGPEKGQLTFLGLVGINDPPRPGVKEAVTTLI-TGGVRIIMITGDS--------QETAVSIARRLG  566 (884)
T ss_pred             HHHHhcCCEEEEEEEEcCCCCeEEEEEEeccCcchhHHHHHHHHHH-HCCCeEEEECCCC--------HHHHHHHHHHcC
Confidence            34667899988775443     4432  245678999999999998 6899999999986        467888999999


Q ss_pred             Ce---------------------------EEEcccCCCchhHHHHHHHhCCCCCcEEEEccCCcccHHHHHHcCCe
Q 017982          249 IK---------------------------VIRHRVKKPAGTAEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGFL  297 (363)
Q Consensus       249 i~---------------------------~I~~~~kKP~p~~~~alk~lgl~pee~vmVGDrL~TDI~~A~raGi~  297 (363)
                      +.                           .++. ...|... ..+++.++-..+.++||||.. +|+.+.++|++.
T Consensus       567 i~~~~~~~v~g~~l~~~~~~~l~~~~~~~~Vfa-r~~P~~K-~~iv~~lq~~g~~v~mvGDGv-ND~pAl~~AdVG  639 (884)
T TIGR01522       567 MPSKTSQSVSGEKLDAMDDQQLSQIVPKVAVFA-RASPEHK-MKIVKALQKRGDVVAMTGDGV-NDAPALKLADIG  639 (884)
T ss_pred             CCCCCCceeEhHHhHhCCHHHHHHHhhcCeEEE-ECCHHHH-HHHHHHHHHCCCEEEEECCCc-ccHHHHHhCCee
Confidence            85                           1322 2355543 234444444458899999999 899999999963

The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116.

>PHA03398 viral phosphatase superfamily protein; Provisional

Probab=97.25  E-value=0.00071  Score=66.73  Aligned_cols=59  Identities=17%  Similarity=0.113  Sum_probs=48.5

Q ss_pred             CCCEEEEcCCceeecCCCCCc---chhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCe
Q 017982          182 GFKGVVFDKDNTLTAPYSLTL---WGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK  250 (363)
Q Consensus       182 GIkaVV~DlDnTL~~~~~~~~---~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~  250 (363)
                      -.+.++||+|+||... ...+   .|++.++|++|+ +.|++++|+||+.        ...+..+++.+|+.
T Consensus       127 ~~~~i~~D~D~TL~~~-~~~v~irdp~V~EtL~eLk-ekGikLaIvTNg~--------Re~v~~~Le~lgL~  188 (303)
T PHA03398        127 IPHVIVFDLDSTLITD-EEPVRIRDPFVYDSLDELK-ERGCVLVLWSYGN--------REHVVHSLKETKLE  188 (303)
T ss_pred             eccEEEEecCCCccCC-CCccccCChhHHHHHHHHH-HCCCEEEEEcCCC--------hHHHHHHHHHcCCC
Confidence            3478999999999864 3333   599999999998 6899999999996        36678888888886

>PRK10187 trehalose-6-phosphate phosphatase; Provisional

Probab=97.21  E-value=0.0059  Score=58.76  Aligned_cols=45  Identities=16%  Similarity=0.158  Sum_probs=36.1

Q ss_pred             CEEEEcCCceeecC----CCCCcchhHHHHHHHHHHhCCCeEEEEeCCC
Q 017982          184 KGVVFDKDNTLTAP----YSLTLWGPLSSSIEQCKSVFGHDIAVFSNSA  228 (363)
Q Consensus       184 kaVV~DlDnTL~~~----~~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~  228 (363)
                      .++++|+|+||...    ....+.+++.++|++|++..|+.++|+|..+
T Consensus        15 ~li~~D~DGTLl~~~~~p~~~~i~~~~~~~L~~L~~~~g~~v~i~SGR~   63 (266)
T PRK10187         15 YAWFFDLDGTLAEIKPHPDQVVVPDNILQGLQLLATANDGALALISGRS   63 (266)
T ss_pred             EEEEEecCCCCCCCCCCcccccCCHHHHHHHHHHHhCCCCcEEEEeCCC
Confidence            57889999999863    3446789999999999843688899888776

>COG4996 Predicted phosphatase [General function prediction only]

Probab=97.11  E-value=0.003  Score=55.79  Aligned_cols=97  Identities=22%  Similarity=0.316  Sum_probs=68.5

Q ss_pred             CEEEEcCCceeecCCC-----------------------CCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHH
Q 017982          184 KGVVFDKDNTLTAPYS-----------------------LTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKA  240 (363)
Q Consensus       184 kaVV~DlDnTL~~~~~-----------------------~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a  240 (363)
                      ++++||.|+|+-..++                       ..++|.+++.++.++ ..|+-+..+|-+.        ...+
T Consensus         1 ~~i~~d~d~t~wdhh~iSsl~pPf~rVs~n~i~Ds~G~ev~L~~~v~~~l~war-nsG~i~~~~sWN~--------~~kA   71 (164)
T COG4996           1 RAIVFDADKTLWDHHNISSLEPPFRRVSSNTIEDSKGREVHLFPDVKETLKWAR-NSGYILGLASWNF--------EDKA   71 (164)
T ss_pred             CcEEEeCCCcccccccchhcCCcceecCccceecCCCeEEEEcHHHHHHHHHHH-hCCcEEEEeecCc--------hHHH
Confidence            3678888888753211                       136899999999988 6899999999775        3667


Q ss_pred             HHHHHHhCCeEEEc-ccCCCch-h--H-HHHHHHh------CCCCCcEEEEccCCcccHHHHH
Q 017982          241 RKLEGKIGIKVIRH-RVKKPAG-T--A-EEIEKHF------GCQSSQLIMVGDRPFTDIVYGN  292 (363)
Q Consensus       241 ~~i~~~LGi~~I~~-~~kKP~p-~--~-~~alk~l------gl~pee~vmVGDrL~TDI~~A~  292 (363)
                      -..++.+++..+++ -+-+|.| .  | -+++..+      .++|++++++.|+   ||..++
T Consensus        72 ~~aLral~~~~yFhy~ViePhP~K~~ML~~llr~i~~er~~~ikP~~Ivy~DDR---~iH~~~  131 (164)
T COG4996          72 IKALRALDLLQYFHYIVIEPHPYKFLMLSQLLREINTERNQKIKPSEIVYLDDR---RIHFGN  131 (164)
T ss_pred             HHHHHHhchhhhEEEEEecCCChhHHHHHHHHHHHHHhhccccCcceEEEEecc---cccHHH
Confidence            77888888874432 2457887 2  3 3455544      4799999999997   455554

>TIGR01675 plant-AP plant acid phosphatase

Probab=97.07  E-value=0.0022  Score=61.14  Aligned_cols=114  Identities=18%  Similarity=0.082  Sum_probs=69.1

Q ss_pred             HcCCCEEEEcCCceeec-------------------C------CCCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCC
Q 017982          180 RRGFKGVVFDKDNTLTA-------------------P------YSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYD  234 (363)
Q Consensus       180 ~~GIkaVV~DlDnTL~~-------------------~------~~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~d  234 (363)
                      ..|..++|||+|.|+..                   |      ......|++.+++++++ +.|++|+++|+.+..    
T Consensus        74 ~dg~~A~V~DIDET~LsN~py~~~~~~g~~~~~~~~~~~wv~~~~apaip~al~l~~~l~-~~G~~Vf~lTGR~e~----  148 (229)
T TIGR01675        74 GDGMDAWIFDVDDTLLSNIPYYKKHGYGTEKTDPTAFWLWLGKGAAPALPEGLKLYQKII-ELGIKIFLLSGRWEE----  148 (229)
T ss_pred             CCCCcEEEEccccccccCHHHHHHhccCCCcCCHHHHHHHHHcCCCCCCHHHHHHHHHHH-HCCCEEEEEcCCChH----
Confidence            35888999999999753                   1      12246789999999998 689999999999621    


Q ss_pred             ccHHHHHHHHHHhCCeE---EEcc----cCCCchhHH-HHHHHhCCCCCc-EEEEccCCcccHHHHHHcCCeEEEE
Q 017982          235 NDASKARKLEGKIGIKV---IRHR----VKKPAGTAE-EIEKHFGCQSSQ-LIMVGDRPFTDIVYGNRNGFLTILT  301 (363)
Q Consensus       235 p~~~~a~~i~~~LGi~~---I~~~----~kKP~p~~~-~alk~lgl~pee-~vmVGDrL~TDI~~A~raGi~TIlV  301 (363)
                       .......-+...|.+.   +...    ..|....++ ...+++--..-+ +.+|||++ .|+.++. +|.+|.-+
T Consensus       149 -~r~~T~~nL~~~G~~~~~~LiLR~~~d~~~~~~~yKs~~R~~l~~~GYrIv~~iGDq~-sDl~G~~-~~~RtFKL  221 (229)
T TIGR01675       149 -LRNATLDNLINAGFTGWKHLILRGLEDSNKTVVTYKSEVRKSLMEEGYRIWGNIGDQW-SDLLGSP-PGRRTFKL  221 (229)
T ss_pred             -HHHHHHHHHHHcCCCCcCeeeecCCCCCCchHhHHHHHHHHHHHhCCceEEEEECCCh-HHhcCCC-ccCceeeC
Confidence             1122445556678763   2211    122221222 222222222223 45899999 7997764 56565544

This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases.

>TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain

Probab=97.02  E-value=0.0034  Score=56.07  Aligned_cols=78  Identities=14%  Similarity=0.194  Sum_probs=54.7

Q ss_pred             cchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCeE-EE-----c--ccCCCchhHHHHHHHhCCC
Q 017982          202 LWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKV-IR-----H--RVKKPAGTAEEIEKHFGCQ  273 (363)
Q Consensus       202 ~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~~-I~-----~--~~kKP~p~~~~alk~lgl~  273 (363)
                      .+|++.++|++|++  ++.++|+||+.        ...+..+++.++..- ++     .  .+..+.  .+.+-..++.+
T Consensus        59 ~rPgv~efL~~l~~--~yel~I~T~~~--------~~yA~~vl~~ldp~~~~F~~ri~~rd~~~~~~--~KdL~~i~~~d  126 (156)
T TIGR02250        59 LRPFLHEFLKEASK--LYEMHVYTMGT--------RAYAQAIAKLIDPDGKYFGDRIISRDESGSPH--TKSLLRLFPAD  126 (156)
T ss_pred             ECCCHHHHHHHHHh--hcEEEEEeCCc--------HHHHHHHHHHhCcCCCeeccEEEEeccCCCCc--cccHHHHcCCC
Confidence            47999999999983  58999999996        467888888887651 21     1  111111  22222446889


Q ss_pred             CCcEEEEccCCcccHHHHHH
Q 017982          274 SSQLIMVGDRPFTDIVYGNR  293 (363)
Q Consensus       274 pee~vmVGDrL~TDI~~A~r  293 (363)
                      .+.+++|.|+.  |+...+.
T Consensus       127 ~~~vvivDd~~--~~~~~~~  144 (156)
T TIGR02250       127 ESMVVIIDDRE--DVWPWHK  144 (156)
T ss_pred             cccEEEEeCCH--HHhhcCc
Confidence            99999999987  6776654

This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031.

>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5

Probab=97.01  E-value=0.0023  Score=63.17  Aligned_cols=104  Identities=15%  Similarity=0.272  Sum_probs=68.2

Q ss_pred             EEEEcCCceeecCCCCCcchhHHHHHHHHHHhC----CCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCeEEEcccCCCc
Q 017982          185 GVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVF----GHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKVIRHRVKKPA  260 (363)
Q Consensus       185 aVV~DlDnTL~~~~~~~~~p~v~e~L~~Lk~~~----Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~~I~~~~kKP~  260 (363)
                      +++||+|+||.  ....+.|++.++++.|+ ..    |+++.++||+.+..    ....++.+.+.+|+++-....--+.
T Consensus         2 ~~ifD~DGvL~--~g~~~i~ga~eal~~L~-~~~~~~g~~~~flTNn~g~s----~~~~~~~l~~~lG~~~~~~~i~~s~   74 (321)
T TIGR01456         2 GFAFDIDGVLF--RGKKPIAGASDALRRLN-RNQGQLKIPYIFLTNGGGFS----ERARAEEISSLLGVDVSPLQVIQSH   74 (321)
T ss_pred             EEEEeCcCceE--CCccccHHHHHHHHHHh-ccccccCCCEEEEecCCCCC----HHHHHHHHHHHcCCCCCHHHHHhhh
Confidence            58999999995  56666999999999998 45    99999999997532    2345666668888863110011111


Q ss_pred             hhHHHHHHHhCCCCCcEEEEccCCcccHHHHHHcCCeEEE
Q 017982          261 GTAEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGFLTIL  300 (363)
Q Consensus       261 p~~~~alk~lgl~pee~vmVGDrL~TDI~~A~raGi~TIl  300 (363)
                      ..+...++.++   ..+++||-.-.  ...+...|+..+.
T Consensus        75 ~~~~~ll~~~~---~~v~viG~~~~--~~~l~~~G~~~vv  109 (321)
T TIGR01456        75 SPYKSLVNKYE---KRILAVGTGSV--RGVAEGYGFQNVV  109 (321)
T ss_pred             HHHHHHHHHcC---CceEEEeChHH--HHHHHHcCCcccc
Confidence            22334444442   26888887643  5555578877653

The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.

>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed

Probab=96.98  E-value=0.0019  Score=61.77  Aligned_cols=59  Identities=19%  Similarity=0.191  Sum_probs=48.5

Q ss_pred             CCCEEEEcCCceeecCCCCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCe
Q 017982          182 GFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK  250 (363)
Q Consensus       182 GIkaVV~DlDnTL~~~~~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~  250 (363)
                      .+|.+++|+|+||... .....+++.++|++|+ +.|++++|+|+..        ...+..+.+.+|+.
T Consensus         3 ~~kli~~DlDGTLl~~-~~~~~~~~~~ai~~l~-~~Gi~~~iaTgR~--------~~~~~~~~~~l~l~   61 (273)
T PRK00192          3 MKLLVFTDLDGTLLDH-HTYSYEPAKPALKALK-EKGIPVIPCTSKT--------AAEVEVLRKELGLE   61 (273)
T ss_pred             cceEEEEcCcccCcCC-CCcCcHHHHHHHHHHH-HCCCEEEEEcCCC--------HHHHHHHHHHcCCC
Confidence            5889999999999853 3456788999999998 6899999999996        35567778888865

>COG4229 Predicted enolase-phosphatase [Energy production and conversion]

Probab=96.93  E-value=0.0055  Score=56.88  Aligned_cols=96  Identities=20%  Similarity=0.261  Sum_probs=70.1

Q ss_pred             CCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHH----hCCeE----EE--cccCCCch-hHHHHHH
Q 017982          200 LTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGK----IGIKV----IR--HRVKKPAG-TAEEIEK  268 (363)
Q Consensus       200 ~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~----LGi~~----I~--~~~kKP~p-~~~~alk  268 (363)
                      ..+||++.++|++.+ +.|++++|-|...         -.++.+.-.    .++.-    .+  .-.+|-.. .+.+++.
T Consensus       102 ahlypDav~~ik~wk-~~g~~vyiYSSGS---------V~AQkL~Fghs~agdL~~lfsGyfDttiG~KrE~~SY~kIa~  171 (229)
T COG4229         102 AHLYPDAVQAIKRWK-ALGMRVYIYSSGS---------VKAQKLFFGHSDAGDLNSLFSGYFDTTIGKKRESQSYAKIAG  171 (229)
T ss_pred             cccCHhHHHHHHHHH-HcCCcEEEEcCCC---------chhHHHhhcccccccHHhhhcceeeccccccccchhHHHHHH
Confidence            358999999999998 6899999999886         223322211    11110    01  11234444 5889999


Q ss_pred             HhCCCCCcEEEEccCCcccHHHHHHcCCeEEEEc-CCCC
Q 017982          269 HFGCQSSQLIMVGDRPFTDIVYGNRNGFLTILTE-PLSL  306 (363)
Q Consensus       269 ~lgl~pee~vmVGDrL~TDI~~A~raGi~TIlV~-p~~~  306 (363)
                      ..|++|.+++++-|.. ..+.+|+.+||.|+++. |++.
T Consensus       172 ~iGl~p~eilFLSDn~-~EL~AA~~vGl~t~l~~R~g~~  209 (229)
T COG4229         172 DIGLPPAEILFLSDNP-EELKAAAGVGLATGLAVRPGNA  209 (229)
T ss_pred             hcCCCchheEEecCCH-HHHHHHHhcchheeeeecCCCC
Confidence            9999999999999999 68999999999999885 5543

>smart00775 LNS2 LNS2 domain

Probab=96.89  E-value=0.013  Score=52.21  Aligned_cols=113  Identities=19%  Similarity=0.176  Sum_probs=68.3

Q ss_pred             EEEEcCCceeecCCC----------CCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHH-----hCC
Q 017982          185 GVVFDKDNTLTAPYS----------LTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGK-----IGI  249 (363)
Q Consensus       185 aVV~DlDnTL~~~~~----------~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~-----LGi  249 (363)
                      +|++|+|+||+....          ....|++.+++++++ +.|++++++|..+-     ......+.++..     .++
T Consensus         1 iVisDIDGTL~~sd~~~~~~~~~~~~~~~~~~~~a~~~l~-~~G~~ivy~TGRp~-----~~~~~t~~~l~~~~~~~~~l   74 (157)
T smart00775        1 IVISDIDGTITKSDVLGHVVPIIGKDWTHPGVAKLYRDIQ-NNGYKILYLTARPI-----GQADRTRSYLSQIKQDGHNL   74 (157)
T ss_pred             CEEEecCCCCcccccccccccccccCcCCHHHHHHHHHHH-HcCCeEEEEcCCcH-----HHHHHHHHHHHHhhhccccC
Confidence            378999999986431          356899999999998 68999999999962     011223455555     335


Q ss_pred             e---EEEc------------ccCCCch-h---HHHHHHHhCCCCCcEE-EEccCCcccHHHHHHcCCe---EEEEcCC
Q 017982          250 K---VIRH------------RVKKPAG-T---AEEIEKHFGCQSSQLI-MVGDRPFTDIVYGNRNGFL---TILTEPL  304 (363)
Q Consensus       250 ~---~I~~------------~~kKP~p-~---~~~alk~lgl~pee~v-mVGDrL~TDI~~A~raGi~---TIlV~p~  304 (363)
                      +   ++..            -.++|.. .   +..+.+.+.-.--..+ -+||+. +|+.+=..+|+.   ...|.+.
T Consensus        75 p~g~li~~~g~~~~~~~~e~i~~~~~~~K~~~l~~i~~~~~~~~~~f~~~~gn~~-~D~~~y~~~gi~~~~i~~i~~~  151 (157)
T smart00775       75 PHGPVLLSPDRLFAALHREVISKKPEVFKIACLRDIKSLFPPQGNPFYAGFGNRI-TDVISYSAVGIPPSRIFTINPK  151 (157)
T ss_pred             CCceEEEcCCcchhhhhcccccCCHHHHHHHHHHHHHHhcCCCCCCEEEEeCCCc-hhHHHHHHcCCChhhEEEECCC
Confidence            3   2210            0233422 1   1223332221122333 477777 999999999996   3444443

This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance.

>PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25)

Probab=96.78  E-value=0.0018  Score=61.31  Aligned_cols=103  Identities=17%  Similarity=0.102  Sum_probs=63.7

Q ss_pred             cCCCEEEEcCCceeec-------------------C------CCCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCc
Q 017982          181 RGFKGVVFDKDNTLTA-------------------P------YSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDN  235 (363)
Q Consensus       181 ~GIkaVV~DlDnTL~~-------------------~------~~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp  235 (363)
                      .+..+||||+|.|+..                   |      ......|++.++++.++ +.|++|+++||....     
T Consensus        70 ~~~~avv~DIDeTvLsn~~y~~~~~~~~~~~~~~~w~~wv~~~~~~aip~a~~l~~~~~-~~G~~V~~iT~R~~~-----  143 (229)
T PF03767_consen   70 DKPPAVVFDIDETVLSNSPYYAYLIFGGESFSPEDWDEWVASGKAPAIPGALELYNYAR-SRGVKVFFITGRPES-----  143 (229)
T ss_dssp             TSEEEEEEESBTTTEEHHHHHHHHHHHTHHH-CCHHHHHHHCTGGEEETTHHHHHHHHH-HTTEEEEEEEEEETT-----
T ss_pred             CCCcEEEEECCcccccCHHHHHHHhhccCCCChHHHHHHHhcccCcccHHHHHHHHHHH-HCCCeEEEEecCCch-----
Confidence            5778999999999642                   1      11145788999999998 689999999998631     


Q ss_pred             cHHHHHHHHHHhCCeE----EEcccCCCc----h----hHHHHHHHhCCCCCcEEEEccCCcccHHHHH
Q 017982          236 DASKARKLEGKIGIKV----IRHRVKKPA----G----TAEEIEKHFGCQSSQLIMVGDRPFTDIVYGN  292 (363)
Q Consensus       236 ~~~~a~~i~~~LGi~~----I~~~~kKP~----p----~~~~alk~lgl~pee~vmVGDrL~TDI~~A~  292 (363)
                      .......-+...|.+.    +....+.+.    .    .-++.+++-|..  =+++|||++ .|+.+++
T Consensus       144 ~r~~T~~nL~~~G~~~~~~l~lr~~~~~~~~~~~~yK~~~r~~i~~~Gy~--Ii~~iGD~~-~D~~~~~  209 (229)
T PF03767_consen  144 QREATEKNLKKAGFPGWDHLILRPDKDPSKKSAVEYKSERRKEIEKKGYR--IIANIGDQL-SDFSGAK  209 (229)
T ss_dssp             CHHHHHHHHHHHTTSTBSCGEEEEESSTSS------SHHHHHHHHHTTEE--EEEEEESSG-GGCHCTH
T ss_pred             hHHHHHHHHHHcCCCccchhccccccccccccccccchHHHHHHHHcCCc--EEEEeCCCH-HHhhccc
Confidence            2334445556667652    211111101    1    112333333321  277999999 7999943

The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A ....

>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional

Probab=96.77  E-value=0.0047  Score=58.07  Aligned_cols=59  Identities=10%  Similarity=0.187  Sum_probs=47.9

Q ss_pred             CCCEEEEcCCceeecCCCCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCe
Q 017982          182 GFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK  250 (363)
Q Consensus       182 GIkaVV~DlDnTL~~~~~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~  250 (363)
                      .+|.+++|+|+||.. ....+.|...++|++++ +.|+.++|+|...        ...+..+.+.+++.
T Consensus         2 ~~kli~~DlDGTLl~-~~~~i~~~~~~ai~~~~-~~G~~~~iaTGR~--------~~~~~~~~~~l~~~   60 (272)
T PRK10530          2 TYRVIALDLDGTLLT-PKKTILPESLEALARAR-EAGYKVIIVTGRH--------HVAIHPFYQALALD   60 (272)
T ss_pred             CccEEEEeCCCceEC-CCCccCHHHHHHHHHHH-HCCCEEEEEcCCC--------hHHHHHHHHhcCCC
Confidence            478999999999986 44467889999999998 5799999999885        24566777777765

>TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase

Probab=96.76  E-value=0.0058  Score=53.10  Aligned_cols=77  Identities=18%  Similarity=0.112  Sum_probs=48.7

Q ss_pred             CCEEEEcCCceeecCCC-----CCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCC-Cc------cHHHHHHHHHHhCCe
Q 017982          183 FKGVVFDKDNTLTAPYS-----LTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEY-DN------DASKARKLEGKIGIK  250 (363)
Q Consensus       183 IkaVV~DlDnTL~~~~~-----~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~-dp------~~~~a~~i~~~LGi~  250 (363)
                      +|++++|+|+||.....     ..+.+++.+.|++++ +.|+.++++|..+..... ..      .-......++..+++
T Consensus         1 ~K~i~~DiDGTL~~~~~~~y~~~~~~~~~ie~L~~l~-~~G~~IiiaTGR~~~~~~~n~~~i~~~~~~~t~~wL~k~~ip   79 (126)
T TIGR01689         1 MKRLVMDLDNTITLTENGDYANVAPILAVIEKLRHYK-ALGFEIVISSSRNMRTYEGNVGKINIHTLPIIILWLNQHNVP   79 (126)
T ss_pred             CCEEEEeCCCCcccCCCCcccccccCHHHHHHHHHHH-HCCCEEEEECCCCchhhhccccccchhhHHHHHHHHHHcCCC
Confidence            37899999999975321     235679999999987 579999999988632100 00      001345566666777


Q ss_pred             EEEcccCCCc
Q 017982          251 VIRHRVKKPA  260 (363)
Q Consensus       251 ~I~~~~kKP~  260 (363)
                      +-..-.+||.
T Consensus        80 Yd~l~~~kp~   89 (126)
T TIGR01689        80 YDEIYVGKPW   89 (126)
T ss_pred             CceEEeCCCc
Confidence            5211246663

Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology.

>TIGR01497 kdpB K+-transporting ATPase, B subunit

Probab=96.72  E-value=0.0096  Score=64.79  Aligned_cols=110  Identities=14%  Similarity=0.168  Sum_probs=82.6

Q ss_pred             HHHHHcCCCEEEEcCCceeec--CCCCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCeEEE
Q 017982          176 AELQRRGFKGVVFDKDNTLTA--PYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKVIR  253 (363)
Q Consensus       176 ~~L~~~GIkaVV~DlDnTL~~--~~~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~~I~  253 (363)
                      +.+.+.|.+.+.+-.|+++..  .-...+.|++.+.+++|+ +.|++++++|...        ...++.+.+.+|++.++
T Consensus       419 ~~~a~~G~r~l~va~~~~~lG~i~l~D~~Rp~a~eaI~~l~-~~Gi~v~miTGD~--------~~ta~~iA~~lGI~~v~  489 (675)
T TIGR01497       419 DQVARQGGTPLVVCEDNRIYGVIYLKDIVKGGIKERFAQLR-KMGIKTIMITGDN--------RLTAAAIAAEAGVDDFI  489 (675)
T ss_pred             HHHHhCCCeEEEEEECCEEEEEEEecccchhHHHHHHHHHH-HCCCEEEEEcCCC--------HHHHHHHHHHcCCCEEE
Confidence            456678999888877777654  245678899999999998 6899999999764        36788999999998654


Q ss_pred             cccCCCchhHHHHHHHhCCCCCcEEEEccCCcccHHHHHHcCCe
Q 017982          254 HRVKKPAGTAEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGFL  297 (363)
Q Consensus       254 ~~~kKP~p~~~~alk~lgl~pee~vmVGDrL~TDI~~A~raGi~  297 (363)
                      . .-.|.... .+++.+.-..+.++|+||.. .|..+-+.+++.
T Consensus       490 a-~~~PedK~-~~v~~lq~~g~~VamvGDG~-NDapAL~~AdvG  530 (675)
T TIGR01497       490 A-EATPEDKI-ALIRQEQAEGKLVAMTGDGT-NDAPALAQADVG  530 (675)
T ss_pred             c-CCCHHHHH-HHHHHHHHcCCeEEEECCCc-chHHHHHhCCEe
Confidence            3 34676533 22333333345799999999 899999998864

One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR.

>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B

Probab=96.71  E-value=0.0048  Score=54.49  Aligned_cols=77  Identities=17%  Similarity=0.265  Sum_probs=55.5

Q ss_pred             hhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCeE--EE-ccc----------------C--CCchh
Q 017982          204 GPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKV--IR-HRV----------------K--KPAGT  262 (363)
Q Consensus       204 p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~~--I~-~~~----------------k--KP~p~  262 (363)
                      +++.+.|+.++ +.|++++|+|.+.        ...++.+++.+|++.  +. ...                .  |.. .
T Consensus        92 ~~~~e~i~~~~-~~~~~v~IvS~~~--------~~~i~~~~~~~~i~~~~v~~~~~~~~~~~~~~~~~~~~~~~~K~~-~  161 (192)
T PF12710_consen   92 PDAMELIRELK-DNGIKVVIVSGSP--------DEIIEPIAERLGIDDDNVIGNELFDNGGGIFTGRITGSNCGGKAE-A  161 (192)
T ss_dssp             TTHHHHHHHHH-HTTSEEEEEEEEE--------HHHHHHHHHHTTSSEGGEEEEEEECTTCCEEEEEEEEEEESHHHH-H
T ss_pred             hhHHHHHHHHH-HCCCEEEEECCCc--------HHHHHHHHHHcCCCceEEEEEeeeecccceeeeeECCCCCCcHHH-H
Confidence            66669999998 5799999999885        478889999999874  22 111                0  211 1


Q ss_pred             HHHH---HHHhCCCCCcEEEEccCCcccHHHHH
Q 017982          263 AEEI---EKHFGCQSSQLIMVGDRPFTDIVYGN  292 (363)
Q Consensus       263 ~~~a---lk~lgl~pee~vmVGDrL~TDI~~A~  292 (363)
                      +.++   ... +.....+++|||+. +|+.+++
T Consensus       162 l~~~~~~~~~-~~~~~~~~~iGDs~-~D~~~lr  192 (192)
T PF12710_consen  162 LKELYIRDEE-DIDPDRVIAIGDSI-NDLPMLR  192 (192)
T ss_dssp             HHHHHHHHHH-THTCCEEEEEESSG-GGHHHHH
T ss_pred             HHHHHHHhhc-CCCCCeEEEEECCH-HHHHHhC
Confidence            2333   222 78899999999999 8998864

>PRK10513 sugar phosphate phosphatase; Provisional

Probab=96.68  E-value=0.0045  Score=58.43  Aligned_cols=58  Identities=14%  Similarity=0.198  Sum_probs=47.7

Q ss_pred             CCCEEEEcCCceeecCCCCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCC
Q 017982          182 GFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGI  249 (363)
Q Consensus       182 GIkaVV~DlDnTL~~~~~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi  249 (363)
                      .+|.+++|+|+||.. ....+.+...++|++++ +.|+.++|+|..+        ...+..+.+.+++
T Consensus         2 ~~kli~~DlDGTLl~-~~~~i~~~~~~ai~~l~-~~G~~~~iaTGR~--------~~~~~~~~~~l~~   59 (270)
T PRK10513          2 AIKLIAIDMDGTLLL-PDHTISPAVKQAIAAAR-AKGVNVVLTTGRP--------YAGVHRYLKELHM   59 (270)
T ss_pred             ceEEEEEecCCcCcC-CCCccCHHHHHHHHHHH-HCCCEEEEecCCC--------hHHHHHHHHHhCC
Confidence            478999999999985 34467899999999998 6899999999886        2456677778876

>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional

Probab=96.67  E-value=0.0049  Score=58.49  Aligned_cols=58  Identities=16%  Similarity=0.201  Sum_probs=48.2

Q ss_pred             CCEEEEcCCceeecCCCCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCe
Q 017982          183 FKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK  250 (363)
Q Consensus       183 IkaVV~DlDnTL~~~~~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~  250 (363)
                      +|.+++|+|+||... ...+.+...++|++|+ +.|+.++|+|..+        ...+..+.+.++++
T Consensus         2 ~kli~~DlDGTLl~~-~~~i~~~~~~ai~~l~-~~G~~~~iaTGR~--------~~~~~~~~~~l~~~   59 (272)
T PRK15126          2 ARLAAFDMDGTLLMP-DHHLGEKTLSTLARLR-ERDITLTFATGRH--------VLEMQHILGALSLD   59 (272)
T ss_pred             ccEEEEeCCCcCcCC-CCcCCHHHHHHHHHHH-HCCCEEEEECCCC--------HHHHHHHHHHcCCC
Confidence            689999999999863 3468899999999998 5899999999886        35667788888875

>PRK10976 putative hydrolase; Provisional

Probab=96.61  E-value=0.0055  Score=57.82  Aligned_cols=58  Identities=19%  Similarity=0.222  Sum_probs=47.8

Q ss_pred             CCEEEEcCCceeecCCCCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCe
Q 017982          183 FKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK  250 (363)
Q Consensus       183 IkaVV~DlDnTL~~~~~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~  250 (363)
                      +|.+++|+|+||... ...+.+...++|++++ +.|++++|+|...        ...+..+.+.++++
T Consensus         2 ikli~~DlDGTLl~~-~~~is~~~~~ai~~l~-~~G~~~~iaTGR~--------~~~~~~~~~~l~~~   59 (266)
T PRK10976          2 YQVVASDLDGTLLSP-DHTLSPYAKETLKLLT-ARGIHFVFATGRH--------HVDVGQIRDNLEIK   59 (266)
T ss_pred             ceEEEEeCCCCCcCC-CCcCCHHHHHHHHHHH-HCCCEEEEEcCCC--------hHHHHHHHHhcCCC
Confidence            688999999999864 3468899999999998 6899999999886        24566777888875

>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]

Probab=96.61  E-value=0.0052  Score=58.01  Aligned_cols=59  Identities=15%  Similarity=0.203  Sum_probs=49.6

Q ss_pred             CCCEEEEcCCceeecCCCCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCe
Q 017982          182 GFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK  250 (363)
Q Consensus       182 GIkaVV~DlDnTL~~~~~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~  250 (363)
                      -++.+++|+|+||.. ......+.+.++|++++ +.|++++|+|...        ...+..+.+.+++.
T Consensus         2 ~~kli~~DlDGTLl~-~~~~i~~~~~~al~~~~-~~g~~v~iaTGR~--------~~~~~~~~~~l~~~   60 (264)
T COG0561           2 MIKLLAFDLDGTLLD-SNKTISPETKEALARLR-EKGVKVVLATGRP--------LPDVLSILEELGLD   60 (264)
T ss_pred             CeeEEEEcCCCCccC-CCCccCHHHHHHHHHHH-HCCCEEEEECCCC--------hHHHHHHHHHcCCC
Confidence            478999999999987 44448999999999998 5899999999986        25677888888876

>KOG2134 consensus Polynucleotide kinase 3' phosphatase [Replication, recombination and repair]

Probab=96.58  E-value=0.0075  Score=61.31  Aligned_cols=116  Identities=21%  Similarity=0.309  Sum_probs=80.9

Q ss_pred             cCCCEEEEcCCceeecC----------CCC-CcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCC----ccHHHHHHHHH
Q 017982          181 RGFKGVVFDKDNTLTAP----------YSL-TLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYD----NDASKARKLEG  245 (363)
Q Consensus       181 ~GIkaVV~DlDnTL~~~----------~~~-~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~d----p~~~~a~~i~~  245 (363)
                      .+.+.+-||+|+||..-          ..| .+++++..-|+.+. +.||.++|.||+.+.....    ....+++.+.+
T Consensus        73 ~~~K~i~FD~dgtlI~t~sg~vf~~~~~dw~~l~~~vp~Klktl~-~~g~~l~iftnq~~i~r~~~~~~~f~~Ki~~i~a  151 (422)
T KOG2134|consen   73 GGSKIIMFDYDGTLIDTKSGKVFPKGSMDWRILFPEVPSKLKTLY-QDGIKLFIFTNQNGIARGKLELEEFKKKIKAIVA  151 (422)
T ss_pred             CCcceEEEecCCceeecCCcceeeccCccceeeccccchhhhhhc-cCCeEEEEEecccccccCcchHHHHHHHHHHHHH
Confidence            37788999999999742          222 35788888899987 5799999999998655321    12356778888


Q ss_pred             HhCCeEEE------cccCCCchhH-HHHHHHhC----CCCCcEEEEccCC--------------cccHHHHHHcCCe
Q 017982          246 KIGIKVIR------HRVKKPAGTA-EEIEKHFG----CQSSQLIMVGDRP--------------FTDIVYGNRNGFL  297 (363)
Q Consensus       246 ~LGi~~I~------~~~kKP~p~~-~~alk~lg----l~pee~vmVGDrL--------------~TDI~~A~raGi~  297 (363)
                      .+|+|+..      ...+||..+| +...+.++    +.-....+|||-.              ..|+.+|.++|+.
T Consensus       152 nl~vPi~~~~A~~~~~yRKP~tGMwe~~~~~~nd~~~Isek~s~fvgdaagr~~~~~~~kkd~S~~D~~FAaN~gvk  228 (422)
T KOG2134|consen  152 NLGVPIQLLAAIIKGKYRKPSTGMWEFLKRLENDSVEISEKASIFVGDAAGRPLDALRRKKDHSSADRKFAANAGVK  228 (422)
T ss_pred             hcCCceEEeeeccCCcccCcchhHHHHHHHHhhccceeeechhhhhhhhccCccccccCcccccHHHHHHHHhcCCc
Confidence            89999753      2357999876 44443442    3334445777732              3699999999985

>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein

Probab=96.55  E-value=0.0059  Score=56.01  Aligned_cols=55  Identities=22%  Similarity=0.337  Sum_probs=43.8

Q ss_pred             EEEcCCceeecCCCCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCe
Q 017982          186 VVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK  250 (363)
Q Consensus       186 VV~DlDnTL~~~~~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~  250 (363)
                      +++|+|+||..... ...+...++|++|+ +.|++++|+||.+        ...++.+.+.+++.
T Consensus         2 i~~DlDGTLL~~~~-~~~~~~~~~l~~l~-~~gi~~~i~TgR~--------~~~~~~~~~~l~~~   56 (221)
T TIGR02463         2 VFSDLDGTLLDSHS-YDWQPAAPWLTRLQ-EAGIPVILCTSKT--------AAEVEYLQKALGLT   56 (221)
T ss_pred             EEEeCCCCCcCCCC-CCcHHHHHHHHHHH-HCCCeEEEEcCCC--------HHHHHHHHHHcCCC
Confidence            68999999986433 34555899999998 6899999999996        35677888888865

This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.

>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB

Probab=96.55  E-value=0.0086  Score=54.12  Aligned_cols=58  Identities=19%  Similarity=0.326  Sum_probs=45.0

Q ss_pred             EEEcCCceeecCCCCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCeEE
Q 017982          186 VVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKVI  252 (363)
Q Consensus       186 VV~DlDnTL~~~~~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~~I  252 (363)
                      +++|+|+||+.+....+.+.+.++|++|+ +.|..++|+|..+        ...+..++..++..++
T Consensus         2 i~~D~DgTL~~~~~~~~~~~~~~~l~~l~-~~g~~~~i~TGR~--------~~~~~~~~~~~~~~~i   59 (204)
T TIGR01484         2 LFFDLDGTLLDPNAHELSPETIEALERLR-EAGVKVVLVTGRS--------LAEIKELLKQLPLPLI   59 (204)
T ss_pred             EEEeCcCCCcCCCCCcCCHHHHHHHHHHH-HCCCEEEEECCCC--------HHHHHHHHHhCCCCEE
Confidence            68999999997543568899999999998 5789999999996        3556666665554443

The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.

>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed

Probab=96.48  E-value=0.0084  Score=57.23  Aligned_cols=60  Identities=17%  Similarity=0.224  Sum_probs=49.0

Q ss_pred             cCCCEEEEcCCceeecCCCCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCe
Q 017982          181 RGFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK  250 (363)
Q Consensus       181 ~GIkaVV~DlDnTL~~~~~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~  250 (363)
                      ..++.|++|+|+||... .....+...++|++|+ +.|+.++|+|..+        ...+..+.+.+|++
T Consensus         5 ~~~~lI~~DlDGTLL~~-~~~i~~~~~~ai~~l~-~~Gi~~viaTGR~--------~~~i~~~~~~l~~~   64 (271)
T PRK03669          5 QDPLLIFTDLDGTLLDS-HTYDWQPAAPWLTRLR-EAQVPVILCSSKT--------AAEMLPLQQTLGLQ   64 (271)
T ss_pred             CCCeEEEEeCccCCcCC-CCcCcHHHHHHHHHHH-HcCCeEEEEcCCC--------HHHHHHHHHHhCCC
Confidence            46789999999999864 4456788999999998 5899999999986        35677788888873

>COG4087 Soluble P-type ATPase [General function prediction only]

Probab=96.40  E-value=0.035  Score=49.09  Aligned_cols=102  Identities=18%  Similarity=0.173  Sum_probs=72.9

Q ss_pred             EcCCceeecCCCCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCeEEEcccCCCchhH-HHH
Q 017982          188 FDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKVIRHRVKKPAGTA-EEI  266 (363)
Q Consensus       188 ~DlDnTL~~~~~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~~I~~~~kKP~p~~-~~a  266 (363)
                      .+.+.|++  ..-.+++++.+.+++|++ . ..++|+|.-.        ...+..+++-.|++.-.... --++.+ .++
T Consensus        19 ~~v~~tia--tgGklf~ev~e~iqeL~d-~-V~i~IASgDr--------~gsl~~lae~~gi~~~rv~a-~a~~e~K~~i   85 (152)
T COG4087          19 GKVLYTIA--TGGKLFSEVSETIQELHD-M-VDIYIASGDR--------KGSLVQLAEFVGIPVERVFA-GADPEMKAKI   85 (152)
T ss_pred             ceEEEEEc--cCcEEcHhhHHHHHHHHH-h-heEEEecCCc--------chHHHHHHHHcCCceeeeec-ccCHHHHHHH
Confidence            35667776  345679999999999994 5 7899998764        24567788888998532111 112223 467


Q ss_pred             HHHhCCCCCcEEEEccCCcccHHHHHHcCCeEEEEcC
Q 017982          267 EKHFGCQSSQLIMVGDRPFTDIVYGNRNGFLTILTEP  303 (363)
Q Consensus       267 lk~lgl~pee~vmVGDrL~TDI~~A~raGi~TIlV~p  303 (363)
                      +..++-+-+.++||||-. +|+.+-+++-+.-+-+.+
T Consensus        86 i~eLkk~~~k~vmVGnGa-ND~laLr~ADlGI~tiq~  121 (152)
T COG4087          86 IRELKKRYEKVVMVGNGA-NDILALREADLGICTIQQ  121 (152)
T ss_pred             HHHhcCCCcEEEEecCCc-chHHHhhhcccceEEecc
Confidence            777877779999999999 899999998765444443

>PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed

Probab=96.39  E-value=0.0099  Score=58.77  Aligned_cols=58  Identities=10%  Similarity=0.199  Sum_probs=48.3

Q ss_pred             CCEEEEcCCceeecCCCCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCe
Q 017982          183 FKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK  250 (363)
Q Consensus       183 IkaVV~DlDnTL~~~~~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~  250 (363)
                      .|.|++|+|+||.. .....++.+.++|++|+ +.|+.++++|...        ...+..+.+.+++.
T Consensus         1 ~KLIftDLDGTLLd-~~~~~~~~a~~aL~~Lk-~~GI~vVlaTGRt--------~~ev~~l~~~Lgl~   58 (302)
T PRK12702          1 MRLVLSSLDGSLLD-LEFNSYGAARQALAALE-RRSIPLVLYSLRT--------RAQLEHLCRQLRLE   58 (302)
T ss_pred             CcEEEEeCCCCCcC-CCCcCCHHHHHHHHHHH-HCCCEEEEEcCCC--------HHHHHHHHHHhCCC
Confidence            47899999999986 45567888999999998 6899999999986        36677888888875

>COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism]

Probab=96.38  E-value=0.018  Score=63.07  Aligned_cols=108  Identities=20%  Similarity=0.265  Sum_probs=81.8

Q ss_pred             hHHHHHcCCCEEEEcCCceeecC--CCCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCeEE
Q 017982          175 WAELQRRGFKGVVFDKDNTLTAP--YSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKVI  252 (363)
Q Consensus       175 ~~~L~~~GIkaVV~DlDnTL~~~--~~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~~I  252 (363)
                      .+.+.+.|-.++++-.|+.+...  -...+.|+..+++++|+ +.|++++++|.-.        ...++.+.+.+||+-+
T Consensus       509 ~~~~~~~G~t~v~va~dg~~~g~i~~~D~~R~~a~~aI~~L~-~~Gi~~~mLTGDn--------~~~A~~iA~~lGId~v  579 (713)
T COG2217         509 IEALESEGKTVVFVAVDGKLVGVIALADELRPDAKEAIAALK-ALGIKVVMLTGDN--------RRTAEAIAKELGIDEV  579 (713)
T ss_pred             HHHHHhcCCeEEEEEECCEEEEEEEEeCCCChhHHHHHHHHH-HCCCeEEEEcCCC--------HHHHHHHHHHcChHhh
Confidence            46677889888999999976542  45678899999999999 6899999999764        4788999999999865


Q ss_pred             EcccCCCchhHHHHHHHhCCCCCcEEEEccCCcccHHHHHHc
Q 017982          253 RHRVKKPAGTAEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRN  294 (363)
Q Consensus       253 ~~~~kKP~p~~~~alk~lgl~pee~vmVGDrL~TDI~~A~ra  294 (363)
                      . +.-+|....+ +.+++.-.-+.++||||-+ +|-.+=..+
T Consensus       580 ~-AellPedK~~-~V~~l~~~g~~VamVGDGI-NDAPALA~A  618 (713)
T COG2217         580 R-AELLPEDKAE-IVRELQAEGRKVAMVGDGI-NDAPALAAA  618 (713)
T ss_pred             e-ccCCcHHHHH-HHHHHHhcCCEEEEEeCCc-hhHHHHhhc
Confidence            3 3457776432 3444444447899999999 687664443

>TIGR01680 Veg_Stor_Prot vegetative storage protein

Probab=96.33  E-value=0.0091  Score=58.34  Aligned_cols=119  Identities=12%  Similarity=0.061  Sum_probs=70.0

Q ss_pred             CCCEEEEcCCceeec-------------------CC-------CCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCc
Q 017982          182 GFKGVVFDKDNTLTA-------------------PY-------SLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDN  235 (363)
Q Consensus       182 GIkaVV~DlDnTL~~-------------------~~-------~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp  235 (363)
                      |..++|||+|.|+..                   |.       .....|++.+++++++ ..|++|+++||.+..     
T Consensus       100 ~~dA~V~DIDET~LsN~pY~~~~~~g~e~~~~~~w~~~Wv~~~~ApAlp~al~ly~~l~-~~G~kIf~VSgR~e~-----  173 (275)
T TIGR01680       100 EKDTFLFNIDGTALSNIPYYKKHGYGSEKFDSELYDEEFVNKGEAPALPETLKNYNKLV-SLGFKIIFLSGRLKD-----  173 (275)
T ss_pred             CCCEEEEECccccccCHHHHHHhcCCCCcCChhhhhHHHHhcccCCCChHHHHHHHHHH-HCCCEEEEEeCCchh-----
Confidence            668999999999761                   22       2245688999999998 689999999999731     


Q ss_pred             cHHHHHHHHHHhCCeE---EEcc-c----CCCchhHH-HHHHHhCCCCCc-EEEEccCCcccHHHHHHcCCeEEEEc-CC
Q 017982          236 DASKARKLEGKIGIKV---IRHR-V----KKPAGTAE-EIEKHFGCQSSQ-LIMVGDRPFTDIVYGNRNGFLTILTE-PL  304 (363)
Q Consensus       236 ~~~~a~~i~~~LGi~~---I~~~-~----kKP~p~~~-~alk~lgl~pee-~vmVGDrL~TDI~~A~raGi~TIlV~-p~  304 (363)
                      .......-+...|.+.   +... .    ++....++ ...+++--+--+ +..|||++ .|..|+...+.+|.-+. |.
T Consensus       174 ~r~aT~~NL~kaGy~~~~~LiLR~~~D~~~~~av~yKs~~R~~li~eGYrIv~~iGDq~-sDl~G~~~g~~RtFKLPNP~  252 (275)
T TIGR01680       174 KQAVTEANLKKAGYHTWEKLILKDPQDNSAENAVEYKTAARAKLIQEGYNIVGIIGDQW-NDLKGEHRGAIRSFKLPNPC  252 (275)
T ss_pred             HHHHHHHHHHHcCCCCcceeeecCCCCCccchhHHHHHHHHHHHHHcCceEEEEECCCH-HhccCCCccCcceecCCCcc
Confidence            1222344455667752   2211 1    11111122 111221111123 46899999 79988774345776663 55


Q ss_pred             CCC
Q 017982          305 SLA  307 (363)
Q Consensus       305 ~~~  307 (363)
                      .+-
T Consensus       253 ~~~  255 (275)
T TIGR01680       253 TTF  255 (275)
T ss_pred             ccc
Confidence            433

The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP.

>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []

Probab=96.29  E-value=0.0094  Score=53.92  Aligned_cols=55  Identities=16%  Similarity=0.212  Sum_probs=45.3

Q ss_pred             EEEcCCceeecCCCCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCe
Q 017982          186 VVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK  250 (363)
Q Consensus       186 VV~DlDnTL~~~~~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~  250 (363)
                      |++|+|+||.. ....+.++..++|++|+ +.|+.++|+|...        ...+..+...+++.
T Consensus         1 i~~DlDGTLl~-~~~~i~~~~~~al~~l~-~~g~~~~i~TGR~--------~~~~~~~~~~~~~~   55 (254)
T PF08282_consen    1 IFSDLDGTLLN-SDGKISPETIEALKELQ-EKGIKLVIATGRS--------YSSIKRLLKELGID   55 (254)
T ss_dssp             EEEECCTTTCS-TTSSSCHHHHHHHHHHH-HTTCEEEEECSST--------HHHHHHHHHHTTHC
T ss_pred             cEEEECCceec-CCCeeCHHHHHHHHhhc-ccceEEEEEccCc--------ccccccccccccch
Confidence            68999999976 44458899999999998 5799999999886        35677888887764

This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....

>PRK01122 potassium-transporting ATPase subunit B; Provisional

Probab=96.28  E-value=0.026  Score=61.58  Aligned_cols=109  Identities=13%  Similarity=0.176  Sum_probs=81.4

Q ss_pred             HHHHHcCCCEEEEcCCceeec--CCCCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCeEEE
Q 017982          176 AELQRRGFKGVVFDKDNTLTA--PYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKVIR  253 (363)
Q Consensus       176 ~~L~~~GIkaVV~DlDnTL~~--~~~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~~I~  253 (363)
                      +.+.+.|.+.+.+-.|+++..  .-...+.|++.+.+++|+ +.|+++.++|.-.        ...++.+.+.+|++.++
T Consensus       418 ~~~a~~G~~~l~va~~~~~lG~i~l~D~~R~~~~eai~~Lr-~~GI~vvMiTGDn--------~~TA~aIA~elGId~v~  488 (679)
T PRK01122        418 DEVARKGGTPLVVAEDNRVLGVIYLKDIVKPGIKERFAELR-KMGIKTVMITGDN--------PLTAAAIAAEAGVDDFL  488 (679)
T ss_pred             HHHHhCCCcEEEEEECCeEEEEEEEeccCchhHHHHHHHHH-HCCCeEEEECCCC--------HHHHHHHHHHcCCcEEE
Confidence            456678999888877777653  244567899999999998 6899999999764        37789999999998664


Q ss_pred             cccCCCchhHHHHHHHhCCCCCcEEEEccCCcccHHHHHHcCC
Q 017982          254 HRVKKPAGTAEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGF  296 (363)
Q Consensus       254 ~~~kKP~p~~~~alk~lgl~pee~vmVGDrL~TDI~~A~raGi  296 (363)
                      . .-.|...+ ++.+.+.-.-+-++|+||-. .|-.+=+++.+
T Consensus       489 A-~~~PedK~-~iV~~lQ~~G~~VaMtGDGv-NDAPALa~ADV  528 (679)
T PRK01122        489 A-EATPEDKL-ALIRQEQAEGRLVAMTGDGT-NDAPALAQADV  528 (679)
T ss_pred             c-cCCHHHHH-HHHHHHHHcCCeEEEECCCc-chHHHHHhCCE
Confidence            3 34776533 23334433345699999999 79988887764

>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily

Probab=96.24  E-value=0.011  Score=55.54  Aligned_cols=55  Identities=13%  Similarity=0.238  Sum_probs=45.1

Q ss_pred             EEEcCCceeecCCCCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCe
Q 017982          186 VVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK  250 (363)
Q Consensus       186 VV~DlDnTL~~~~~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~  250 (363)
                      +++|+|+||.. ....+.++..++|++|+ +.|+.++|+|+..        ...+..+.+.+++.
T Consensus         2 i~~DlDGTLl~-~~~~i~~~~~~~i~~l~-~~G~~~~iaTGR~--------~~~~~~~~~~~~~~   56 (256)
T TIGR00099         2 IFIDLDGTLLN-DDHTISPSTKEALAKLR-EKGIKVVLATGRP--------YKEVKNILKELGLD   56 (256)
T ss_pred             EEEeCCCCCCC-CCCccCHHHHHHHHHHH-HCCCeEEEEeCCC--------HHHHHHHHHHcCCC
Confidence            68999999986 34467889999999998 5799999999996        35667777777765

The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.

>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase

Probab=96.20  E-value=0.016  Score=54.42  Aligned_cols=54  Identities=22%  Similarity=0.271  Sum_probs=43.4

Q ss_pred             EEEEcCCceeecCCCCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCC
Q 017982          185 GVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGI  249 (363)
Q Consensus       185 aVV~DlDnTL~~~~~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi  249 (363)
                      .+++|+|+||.. . ....+++.++|++|+ +.|++++++|+..        ...+..+.+.+|+
T Consensus         1 li~~DlDGTLl~-~-~~~~~~~~~ai~~l~-~~G~~~vi~TgR~--------~~~~~~~~~~lg~   54 (225)
T TIGR02461         1 VIFTDLDGTLLP-P-GYEPGPAREALEELK-DLGFPIVFVSSKT--------RAEQEYYREELGV   54 (225)
T ss_pred             CEEEeCCCCCcC-C-CCCchHHHHHHHHHH-HCCCEEEEEeCCC--------HHHHHHHHHHcCC
Confidence            378999999975 2 345678999999998 5799999999886        3556778888886

Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.

>PRK14010 potassium-transporting ATPase subunit B; Provisional

Probab=96.18  E-value=0.031  Score=60.96  Aligned_cols=109  Identities=13%  Similarity=0.168  Sum_probs=79.6

Q ss_pred             HHHHHcCCCEEEEcCCceeec--CCCCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCeEEE
Q 017982          176 AELQRRGFKGVVFDKDNTLTA--PYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKVIR  253 (363)
Q Consensus       176 ~~L~~~GIkaVV~DlDnTL~~--~~~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~~I~  253 (363)
                      +.+.+.|.+.+.+-.|+++..  .-...+.|++.+.+++|+ +.|+++.++|.-.        ...++.+.+.+|++.++
T Consensus       414 ~~~a~~G~~~l~v~~~~~~lG~i~l~Dp~R~~a~e~I~~Lr-~~GI~vvMiTGDn--------~~TA~aIA~elGI~~v~  484 (673)
T PRK14010        414 KGVSKKGGTPLVVLEDNEILGVIYLKDVIKDGLVERFRELR-EMGIETVMCTGDN--------ELTAATIAKEAGVDRFV  484 (673)
T ss_pred             HHHHhCCCeEEEEEECCEEEEEEEeecCCcHHHHHHHHHHH-HCCCeEEEECCCC--------HHHHHHHHHHcCCceEE
Confidence            345677888776545666543  245567899999999998 6899999999764        37789999999998654


Q ss_pred             cccCCCchhHHHHHHHhCCCCCcEEEEccCCcccHHHHHHcCC
Q 017982          254 HRVKKPAGTAEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGF  296 (363)
Q Consensus       254 ~~~kKP~p~~~~alk~lgl~pee~vmVGDrL~TDI~~A~raGi  296 (363)
                      .. -+|.-.+ ++.+.+.-.-+-++|+||-. .|-.+=+++.+
T Consensus       485 A~-~~PedK~-~iV~~lQ~~G~~VaMtGDGv-NDAPALa~ADV  524 (673)
T PRK14010        485 AE-CKPEDKI-NVIREEQAKGHIVAMTGDGT-NDAPALAEANV  524 (673)
T ss_pred             cC-CCHHHHH-HHHHHHHhCCCEEEEECCCh-hhHHHHHhCCE
Confidence            43 4777543 23344443345789999999 79988888765

>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional

Probab=96.15  E-value=0.015  Score=54.70  Aligned_cols=86  Identities=15%  Similarity=0.155  Sum_probs=53.3

Q ss_pred             hHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCeEE----------EcccCCCchhHHHHHHHhCCCC
Q 017982          205 PLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKVI----------RHRVKKPAGTAEEIEKHFGCQS  274 (363)
Q Consensus       205 ~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~~I----------~~~~kKP~p~~~~alk~lgl~p  274 (363)
                      ++.+.+..++ ..+..+.|+++....   .......+.+.+.+++...          ..+..|+. ++..+++.+|+++
T Consensus       141 ~~~~~~~~~~-~~~~~~~i~~~~~~~---~~~~~~~~~~~~~~~~~~~~s~~~~~ei~~~~~~K~~-~l~~l~~~~gi~~  215 (272)
T PRK10530        141 QVDSLAQAAR-QVNAIWKFALTHEDL---PQLQHFAKHVEHELGLECEWSWHDQVDIARKGNSKGK-RLTQWVEAQGWSM  215 (272)
T ss_pred             EcccHHHHHh-hcCCcEEEEEecCCH---HHHHHHHHHHhhhcCceEEEecCceEEEecCCCChHH-HHHHHHHHcCCCH
Confidence            3444444444 345456667765310   0001233445555565421          12334443 4688999999999


Q ss_pred             CcEEEEccCCcccHHHHHHcCC
Q 017982          275 SQLIMVGDRPFTDIVYGNRNGF  296 (363)
Q Consensus       275 ee~vmVGDrL~TDI~~A~raGi  296 (363)
                      +++++|||+. .|+.+++.+|+
T Consensus       216 ~e~i~~GD~~-NDi~m~~~ag~  236 (272)
T PRK10530        216 KNVVAFGDNF-NDISMLEAAGL  236 (272)
T ss_pred             HHeEEeCCCh-hhHHHHHhcCc
Confidence            9999999998 89999999997

>PF03031 NIF: NLI interacting factor-like phosphatase; InterPro: IPR004274 The function of this domain is unclear

Probab=96.14  E-value=0.008  Score=52.57  Aligned_cols=123  Identities=17%  Similarity=0.132  Sum_probs=65.8

Q ss_pred             CEEEEcCCceeecCCCC------------------CcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHH
Q 017982          184 KGVVFDKDNTLTAPYSL------------------TLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEG  245 (363)
Q Consensus       184 kaVV~DlDnTL~~~~~~------------------~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~  245 (363)
                      +.+|+|+|+||......                  ..-|++.++|+.|.+  .+.++|.|.+.        ...++.+.+
T Consensus         1 k~LVlDLD~TLv~~~~~~~~~~~~~~~~~~~~~~v~~RP~l~~FL~~l~~--~~ev~i~T~~~--------~~ya~~v~~   70 (159)
T PF03031_consen    1 KTLVLDLDGTLVHSSSKSPLPYDFKIIDQRGGYYVKLRPGLDEFLEELSK--HYEVVIWTSAS--------EEYAEPVLD   70 (159)
T ss_dssp             EEEEEE-CTTTEEEESSTCTT-SEEEETEEEEEEEEE-TTHHHHHHHHHH--HCEEEEE-SS---------HHHHHHHHH
T ss_pred             CEEEEeCCCcEEEEeecCCCCcccceeccccceeEeeCchHHHHHHHHHH--hceEEEEEeeh--------hhhhhHHHH
Confidence            47899999999752211                  256999999999974  47999999996        467788888


Q ss_pred             HhCC-----eEEEc--ccCCCchhHHHHHHHhCCCCCcEEEEccCCcccHHHHHHcCCeEEEEcCCCCC--CchhHHHHH
Q 017982          246 KIGI-----KVIRH--RVKKPAGTAEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGFLTILTEPLSLA--EEPFIVRQV  316 (363)
Q Consensus       246 ~LGi-----~~I~~--~~kKP~p~~~~alk~lgl~pee~vmVGDrL~TDI~~A~raGi~TIlV~p~~~~--~e~~~t~~~  316 (363)
                      .++-     ..+..  .+..-...+.+-++.+|-+.+++|+|.|+..  .....  .-..|.|.+....  .+....++.
T Consensus        71 ~ldp~~~~~~~~~~r~~~~~~~~~~~KdL~~l~~~~~~vvivDD~~~--~~~~~--~~N~i~v~~f~~~~~~D~~L~~l~  146 (159)
T PF03031_consen   71 ALDPNGKLFSRRLYRDDCTFDKGSYIKDLSKLGRDLDNVVIVDDSPR--KWALQ--PDNGIPVPPFFGDTPNDRELLRLL  146 (159)
T ss_dssp             HHTTTTSSEEEEEEGGGSEEETTEEE--GGGSSS-GGGEEEEES-GG--GGTTS--GGGEEE----SSCHTT--HHHHHH
T ss_pred             hhhhhccccccccccccccccccccccchHHHhhccccEEEEeCCHH--Heecc--CCceEEeccccCCCcchhHHHHHH
Confidence            8763     12211  1110000112445566778899999999873  32222  2235777765543  233333444


Q ss_pred             HHHH
Q 017982          317 RKLE  320 (363)
Q Consensus       317 R~lE  320 (363)
                      ..||
T Consensus       147 ~~L~  150 (159)
T PF03031_consen  147 PFLE  150 (159)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            4443

It is found in proteins of diverse function including phosphatases some of which may be active in active in ternary elongation complexes and a number of NLI interacting factors. In the phospatases this domain is often present N-terminal to the BRCT domain (IPR001357 from INTERPRO).; GO: 0005515 protein binding; PDB: 3L0Y_A 2GHQ_A 3PGL_A 3L0C_B 1TA0_A 2GHT_A 3L0B_B 1T9Z_A 3QLE_A 2Q5E_E ....

>KOG2882 consensus p-Nitrophenyl phosphatase [Inorganic ion transport and metabolism]

Probab=96.00  E-value=0.045  Score=54.13  Aligned_cols=114  Identities=16%  Similarity=0.206  Sum_probs=67.8

Q ss_pred             cCCCEEEEcCCceeecCCCCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCeEEE-cccCCC
Q 017982          181 RGFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKVIR-HRVKKP  259 (363)
Q Consensus       181 ~GIkaVV~DlDnTL~~~~~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~~I~-~~~kKP  259 (363)
                      .++..++||-|++|  |......|++.++++.|+ ..|..+.++||++...    ....++++ +.+|+.-+- ...--|
T Consensus        20 ~~~DtfifDcDGVl--W~g~~~ipGs~e~l~~L~-~~gK~i~fvTNNStks----r~~y~kK~-~~lG~~~v~e~~i~ss   91 (306)
T KOG2882|consen   20 DSFDTFIFDCDGVL--WLGEKPIPGSPEALNLLK-SLGKQIIFVTNNSTKS----REQYMKKF-AKLGFNSVKEENIFSS   91 (306)
T ss_pred             hhcCEEEEcCCcce--eecCCCCCChHHHHHHHH-HcCCcEEEEeCCCcch----HHHHHHHH-HHhCccccCcccccCh
Confidence            58999999999999  567788999999999998 6898999999997421    01222232 345654220 111112


Q ss_pred             chhHHHHHHHhCCCCCcEEEEccCCcccHHHHHHcCCeEEEEcCC
Q 017982          260 AGTAEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGFLTILTEPL  304 (363)
Q Consensus       260 ~p~~~~alk~lgl~pee~vmVGDrL~TDI~~A~raGi~TIlV~p~  304 (363)
                      .-..-..+++.....+.+.++|-.-..+-  ..++|+..+...+.
T Consensus        92 a~~~a~ylk~~~~~~k~Vyvig~~gi~~e--L~~aG~~~~g~~~~  134 (306)
T KOG2882|consen   92 AYAIADYLKKRKPFGKKVYVIGEEGIREE--LDEAGFEYFGGGPD  134 (306)
T ss_pred             HHHHHHHHHHhCcCCCeEEEecchhhhHH--HHHcCceeecCCCC
Confidence            21122223333334566777776544322  35567554444433

>PLN02887 hydrolase family protein

Probab=95.83  E-value=0.024  Score=60.76  Aligned_cols=62  Identities=11%  Similarity=0.155  Sum_probs=49.9

Q ss_pred             HHHcCCCEEEEcCCceeecCCCCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCC
Q 017982          178 LQRRGFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGI  249 (363)
Q Consensus       178 L~~~GIkaVV~DlDnTL~~~~~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi  249 (363)
                      .+...+|.|++|+|+||.. ....+.+...++|++++ +.|+.++|+|...        ...+..+.+.+++
T Consensus       303 ~~~~~iKLIa~DLDGTLLn-~d~~Is~~t~eAI~kl~-ekGi~~vIATGR~--------~~~i~~~l~~L~l  364 (580)
T PLN02887        303 FYKPKFSYIFCDMDGTLLN-SKSQISETNAKALKEAL-SRGVKVVIATGKA--------RPAVIDILKMVDL  364 (580)
T ss_pred             hhccCccEEEEeCCCCCCC-CCCccCHHHHHHHHHHH-HCCCeEEEEcCCC--------HHHHHHHHHHhCc
Confidence            3467799999999999985 34568899999999998 6899999999886        3456666676664

>PTZ00174 phosphomannomutase; Provisional

Probab=95.78  E-value=0.015  Score=54.96  Aligned_cols=46  Identities=24%  Similarity=0.239  Sum_probs=39.7

Q ss_pred             cCCCEEEEcCCceeecCCCCCcchhHHHHHHHHHHhCCCeEEEEeCCC
Q 017982          181 RGFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSA  228 (363)
Q Consensus       181 ~GIkaVV~DlDnTL~~~~~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~  228 (363)
                      ..+|.+++|+|+||.. ....+.|...++|++++ +.|+.++|+|..+
T Consensus         3 ~~~klia~DlDGTLL~-~~~~is~~~~~ai~~l~-~~Gi~~viaTGR~   48 (247)
T PTZ00174          3 MKKTILLFDVDGTLTK-PRNPITQEMKDTLAKLK-SKGFKIGVVGGSD   48 (247)
T ss_pred             CCCeEEEEECcCCCcC-CCCCCCHHHHHHHHHHH-HCCCEEEEEcCCC
Confidence            4689999999999985 44567889999999998 5799999999885

>PRK11590 hypothetical protein; Provisional

Probab=95.65  E-value=0.13  Score=47.34  Aligned_cols=94  Identities=10%  Similarity=-0.043  Sum_probs=65.8

Q ss_pred             CcchhHHHHH-HHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCC---e-EEE-----cccCC---Cch-h---H
Q 017982          201 TLWGPLSSSI-EQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGI---K-VIR-----HRVKK---PAG-T---A  263 (363)
Q Consensus       201 ~~~p~v~e~L-~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi---~-~I~-----~~~kK---P~p-~---~  263 (363)
                      .++|++.+.| +.++ +.|++++|+||+.        ...++.+++.+|+   + +|.     ...+|   |.. +   .
T Consensus        95 ~~~pga~e~L~~~l~-~~G~~l~IvSas~--------~~~~~~il~~l~~~~~~~~i~t~l~~~~tg~~~g~~c~g~~K~  165 (211)
T PRK11590         95 TAFPVVQERLTTYLL-SSDADVWLITGSP--------QPLVEQVYFDTPWLPRVNLIASQMQRRYGGWVLTLRCLGHEKV  165 (211)
T ss_pred             cCCccHHHHHHHHHH-hCCCEEEEEeCCc--------HHHHHHHHHHccccccCceEEEEEEEEEccEECCccCCChHHH
Confidence            4589999999 4566 5799999999996        3667788888773   3 332     00112   222 1   2


Q ss_pred             HHHHHHhCCCCCcEEEEccCCcccHHHHHHcCCeEEEEcCCC
Q 017982          264 EEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGFLTILTEPLS  305 (363)
Q Consensus       264 ~~alk~lgl~pee~vmVGDrL~TDI~~A~raGi~TIlV~p~~  305 (363)
                      ..+.+.++.+...+..-||+. .|+..-..+| ..++|+|..
T Consensus       166 ~~l~~~~~~~~~~~~aY~Ds~-~D~pmL~~a~-~~~~vnp~~  205 (211)
T PRK11590        166 AQLERKIGTPLRLYSGYSDSK-QDNPLLYFCQ-HRWRVTPRG  205 (211)
T ss_pred             HHHHHHhCCCcceEEEecCCc-ccHHHHHhCC-CCEEECccH
Confidence            344445677777888999999 7999988888 567887754

>COG2503 Predicted secreted acid phosphatase [General function prediction only]

Probab=95.50  E-value=0.066  Score=51.73  Aligned_cols=97  Identities=20%  Similarity=0.130  Sum_probs=60.5

Q ss_pred             CCEEEEcCCceeec-------------------CC------CCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccH
Q 017982          183 FKGVVFDKDNTLTA-------------------PY------SLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDA  237 (363)
Q Consensus       183 IkaVV~DlDnTL~~-------------------~~------~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~  237 (363)
                      -++|++|+|.|+..                   |+      .....||+.+++++.- ..|..|+.+||.+.....+   
T Consensus        79 ~~aVvlDlDETvLdNs~Yqgy~v~nnk~f~pe~Wd~wV~a~~sk~vpGA~eFl~Yvn-~~Gg~ifyiSNR~~~~~~~---  154 (274)
T COG2503          79 KKAVVLDLDETVLDNSAYQGYQVLNNKGFTPETWDKWVQAKKSKAVPGAVEFLNYVN-SNGGKIFYISNRDQENEKD---  154 (274)
T ss_pred             CceEEEecchHhhcCccccchhhhcCCCCCccchHHHHhhcccccCccHHHHHHHHH-hcCcEEEEEeccchhcccc---
Confidence            34899999999752                   11      1246799999999987 5788999999997422111   


Q ss_pred             HHHHHHHHHhCCeE------EEcccCCCchhHHHHHHHhCCCCCcEEEEccCCcccH
Q 017982          238 SKARKLEGKIGIKV------IRHRVKKPAGTAEEIEKHFGCQSSQLIMVGDRPFTDI  288 (363)
Q Consensus       238 ~~a~~i~~~LGi~~------I~~~~kKP~p~~~~alk~lgl~pee~vmVGDrL~TDI  288 (363)
                       -...=+..+|++.      ++...+|+...-.+++++   .-.=++.|||.+ .|.
T Consensus       155 -~T~~nLk~~g~~~~~~~~~llkk~~k~Ke~R~~~v~k---~~~iVm~vGDNl-~DF  206 (274)
T COG2503         155 -GTIENLKSEGLPQVLESHLLLKKDKKSKEVRRQAVEK---DYKIVMLVGDNL-DDF  206 (274)
T ss_pred             -hhHHHHHHcCcccccccceEEeeCCCcHHHHHHHHhh---ccceeeEecCch-hhh
Confidence             1223345667763      333344554422233333   344577899998 354

>TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase

Probab=95.49  E-value=0.045  Score=61.49  Aligned_cols=87  Identities=17%  Similarity=0.217  Sum_probs=64.2

Q ss_pred             CCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCeE---------------------------
Q 017982          199 SLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKV---------------------------  251 (363)
Q Consensus       199 ~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~~---------------------------  251 (363)
                      ...+.|++.+++++|+ +.|+++.++|...        ...+..+.+.+|+..                           
T Consensus       535 ~Dplr~~v~e~I~~l~-~aGI~v~miTGD~--------~~tA~~ia~~~gi~~~~~~v~~~~~~g~~l~~~~~~~~~~~~  605 (917)
T TIGR01116       535 LDPPRPEVADAIEKCR-TAGIRVIMITGDN--------KETAEAICRRIGIFSPDEDVTFKSFTGREFDEMGPAKQRAAC  605 (917)
T ss_pred             eCCCchhHHHHHHHHH-HCCCEEEEecCCC--------HHHHHHHHHHcCCCCCCccccceeeeHHHHhhCCHHHHHHhh
Confidence            3457899999999998 6899999999764        356778888887731                           


Q ss_pred             ----EEcccCCCchhHHHHHHHhCCCCCcEEEEccCCcccHHHHHHcCCe
Q 017982          252 ----IRHRVKKPAGTAEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGFL  297 (363)
Q Consensus       252 ----I~~~~kKP~p~~~~alk~lgl~pee~vmVGDrL~TDI~~A~raGi~  297 (363)
                          ++ +...|... .++++.++-..+.++||||.. .|+.+.+.|++.
T Consensus       606 ~~~~v~-ar~~P~~K-~~iV~~lq~~g~~va~iGDG~-ND~~alk~AdVG  652 (917)
T TIGR01116       606 RSAVLF-SRVEPSHK-SELVELLQEQGEIVAMTGDGV-NDAPALKKADIG  652 (917)
T ss_pred             hcCeEE-EecCHHHH-HHHHHHHHhcCCeEEEecCCc-chHHHHHhCCee
Confidence                11 11233322 345566666678899999999 799999999983

The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522.

>PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 []

Probab=95.47  E-value=0.057  Score=51.67  Aligned_cols=95  Identities=16%  Similarity=0.186  Sum_probs=64.5

Q ss_pred             CCCcchhHHHHHHHHHH-hCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCeE----EE-------------------c
Q 017982          199 SLTLWGPLSSSIEQCKS-VFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKV----IR-------------------H  254 (363)
Q Consensus       199 ~~~~~p~v~e~L~~Lk~-~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~~----I~-------------------~  254 (363)
                      ...+.|++.++++.+.+ ..|+.++|+|++.        .-.++.+++..|+..    |+                   |
T Consensus        69 ~ip~~pgm~~~l~~l~~~~~~~~~~IiSDaN--------s~fI~~iL~~~gl~~~f~~I~TNpa~~~~~G~l~v~pyh~h  140 (234)
T PF06888_consen   69 SIPIDPGMKELLRFLAKNQRGFDLIIISDAN--------SFFIETILEHHGLRDCFSEIFTNPACFDADGRLRVRPYHSH  140 (234)
T ss_pred             cCCCCccHHHHHHHHHhcCCCceEEEEeCCc--------HhHHHHHHHhCCCccccceEEeCCceecCCceEEEeCccCC
Confidence            44567889999999942 4689999999886        256788888888751    11                   2


Q ss_pred             ccCC--Cch----hHHHHHHH---hCCCCCcEEEEccCCcccHHHHHHcCCe-EEEEc
Q 017982          255 RVKK--PAG----TAEEIEKH---FGCQSSQLIMVGDRPFTDIVYGNRNGFL-TILTE  302 (363)
Q Consensus       255 ~~kK--P~p----~~~~alk~---lgl~pee~vmVGDrL~TDI~~A~raGi~-TIlV~  302 (363)
                      .+.+  |+-    .+++.++.   -|+.-+++++|||.. +|+-.+.+++-. .++.+
T Consensus       141 ~C~~C~~NmCK~~il~~~~~~~~~~g~~~~rviYiGDG~-nD~Cp~~~L~~~D~v~~R  197 (234)
T PF06888_consen  141 GCSLCPPNMCKGKILERLLQEQAQRGVPYDRVIYIGDGR-NDFCPALRLRPRDVVFPR  197 (234)
T ss_pred             CCCcCCCccchHHHHHHHHHHHhhcCCCcceEEEECCCC-CCcCcccccCCCCEEecC
Confidence            3322  221    23444444   267789999999998 899999886653 34443

It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity

>KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism]

Probab=95.40  E-value=0.096  Score=58.31  Aligned_cols=103  Identities=19%  Similarity=0.245  Sum_probs=78.9

Q ss_pred             HHHHHcCCCEEEEcCCceeecC--CCCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCeEEE
Q 017982          176 AELQRRGFKGVVFDKDNTLTAP--YSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKVIR  253 (363)
Q Consensus       176 ~~L~~~GIkaVV~DlDnTL~~~--~~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~~I~  253 (363)
                      ++....|..++.+-.|++++..  -.+.+.|++..++..|+ +.|++++++|.-.        ..-++.+++.+|++-++
T Consensus       696 ~~~e~~g~tvv~v~vn~~l~gv~~l~D~vr~~a~~av~~Lk-~~Gi~v~mLTGDn--------~~aA~svA~~VGi~~V~  766 (951)
T KOG0207|consen  696 TESERKGQTVVYVAVNGQLVGVFALEDQVRPDAALAVAELK-SMGIKVVMLTGDN--------DAAARSVAQQVGIDNVY  766 (951)
T ss_pred             hhHhhcCceEEEEEECCEEEEEEEeccccchhHHHHHHHHH-hcCceEEEEcCCC--------HHHHHHHHHhhCcceEE
Confidence            3445678899999999999764  34568899999999999 6899999999775        36788999999998775


Q ss_pred             cccCCCchhHHHHHHHhCCCCCcEEEEccCCcccHHH
Q 017982          254 HRVKKPAGTAEEIEKHFGCQSSQLIMVGDRPFTDIVY  290 (363)
Q Consensus       254 ~~~kKP~p~~~~alk~lgl~pee~vmVGDrL~TDI~~  290 (363)
                       +.-+|.... +..+.+.-....++||||-+ .|--+
T Consensus       767 -aev~P~~K~-~~Ik~lq~~~~~VaMVGDGI-NDaPA  800 (951)
T KOG0207|consen  767 -AEVLPEQKA-EKIKEIQKNGGPVAMVGDGI-NDAPA  800 (951)
T ss_pred             -eccCchhhH-HHHHHHHhcCCcEEEEeCCC-CccHH
Confidence             345787633 23455555557899999999 67544

>TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase

Probab=95.28  E-value=0.12  Score=57.76  Aligned_cols=87  Identities=13%  Similarity=0.053  Sum_probs=63.4

Q ss_pred             CCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCe-------------------------EEE
Q 017982          199 SLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK-------------------------VIR  253 (363)
Q Consensus       199 ~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~-------------------------~I~  253 (363)
                      ...+.|++.+++++|+ +.|+++.++|.-.        ...+..+.+.+|+.                         .++
T Consensus       513 ~Dp~R~~~~~aI~~l~-~aGI~vvmiTGD~--------~~tA~aIA~~lGI~~~~v~~g~~l~~~~~~el~~~~~~~~vf  583 (867)
T TIGR01524       513 LDPPKESTKEAIAALF-KNGINVKVLTGDN--------EIVTARICQEVGIDANDFLLGADIEELSDEELARELRKYHIF  583 (867)
T ss_pred             eCCCchhHHHHHHHHH-HCCCEEEEEcCCC--------HHHHHHHHHHcCCCCCCeeecHhhhhCCHHHHHHHhhhCeEE
Confidence            4467899999999998 6899999999764        36788999999986                         232


Q ss_pred             cccCCCchhHHHHHHHhCCCCCcEEEEccCCcccHHHHHHcCCe
Q 017982          254 HRVKKPAGTAEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGFL  297 (363)
Q Consensus       254 ~~~kKP~p~~~~alk~lgl~pee~vmVGDrL~TDI~~A~raGi~  297 (363)
                      . .-.|.... ++.+.+.-.-+.++|+||.. .|..+=+.|.+.
T Consensus       584 A-r~~Pe~K~-~iV~~lq~~G~vVam~GDGv-NDapALk~AdVG  624 (867)
T TIGR01524       584 A-RLTPMQKS-RIIGLLKKAGHTVGFLGDGI-NDAPALRKADVG  624 (867)
T ss_pred             E-ECCHHHHH-HHHHHHHhCCCEEEEECCCc-ccHHHHHhCCEE
Confidence            2 23666432 23333333345799999999 799998888764

The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis.

>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family

Probab=95.17  E-value=0.055  Score=51.02  Aligned_cols=55  Identities=24%  Similarity=0.470  Sum_probs=43.0

Q ss_pred             EEEcCCceeecCCCCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCe
Q 017982          186 VVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK  250 (363)
Q Consensus       186 VV~DlDnTL~~~~~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~  250 (363)
                      +++|+|+||...... ..+...+++++|+ +.|++++|+|..+        ...+..+++.+|++
T Consensus         2 i~~DlDGTll~~~~~-~~~~~~~~i~~l~-~~g~~~~~~TgR~--------~~~~~~~~~~~~~~   56 (256)
T TIGR01486         2 IFTDLDGTLLDPHGY-DWGPAKEVLERLQ-ELGIPVIPCTSKT--------AAEVEYLRKELGLE   56 (256)
T ss_pred             EEEcCCCCCcCCCCc-CchHHHHHHHHHH-HCCCeEEEEcCCC--------HHHHHHHHHHcCCC
Confidence            689999999864432 3456899999998 5799999999885        35677788888874

This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta

>TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase

Probab=95.09  E-value=0.15  Score=56.27  Aligned_cols=110  Identities=15%  Similarity=0.199  Sum_probs=76.5

Q ss_pred             HHHHHcCCCEEEEcC---Cc--eeec--CCCCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhC
Q 017982          176 AELQRRGFKGVVFDK---DN--TLTA--PYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIG  248 (363)
Q Consensus       176 ~~L~~~GIkaVV~Dl---Dn--TL~~--~~~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LG  248 (363)
                      +.+.+.|.+++.+-.   ++  ++..  .-...+.|++.+++++|+ +.|+++.++|.-.        ...++.+.+.+|
T Consensus       410 ~~~~~~G~rvl~vA~~~~e~~l~~~Gli~l~Dp~R~~a~~aI~~l~-~aGI~v~miTGD~--------~~tA~~IA~~lG  480 (755)
T TIGR01647       410 DELASRGYRALGVARTDEEGRWHFLGLLPLFDPPRHDTKETIERAR-HLGVEVKMVTGDH--------LAIAKETARRLG  480 (755)
T ss_pred             HHHHhCCCEEEEEEEEcCCCCcEEEEEeeccCCChhhHHHHHHHHH-HCCCeEEEECCCC--------HHHHHHHHHHcC
Confidence            456678988877643   22  4432  245578899999999999 6899999999775        367889999999


Q ss_pred             CeE------------------------------EEcccCCCchhHHHHHHHhCCCCCcEEEEccCCcccHHHHHHcCCe
Q 017982          249 IKV------------------------------IRHRVKKPAGTAEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGFL  297 (363)
Q Consensus       249 i~~------------------------------I~~~~kKP~p~~~~alk~lgl~pee~vmVGDrL~TDI~~A~raGi~  297 (363)
                      +..                              ++. .-.|.... .+.+.+.-.-+-+.|+||.. .|..+=+.|.+-
T Consensus       481 I~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfA-r~~Pe~K~-~iV~~lq~~G~~VamvGDGv-NDapAL~~AdVG  556 (755)
T TIGR01647       481 LGTNIYTADVLLKGDNRDDLPSGELGEMVEDADGFA-EVFPEHKY-EIVEILQKRGHLVGMTGDGV-NDAPALKKADVG  556 (755)
T ss_pred             CCCCCcCHHHhcCCcchhhCCHHHHHHHHHhCCEEE-ecCHHHHH-HHHHHHHhcCCEEEEEcCCc-ccHHHHHhCCee
Confidence            852                              222 23555422 23334433446799999999 799888877654

This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast.

>KOG1618 consensus Predicted phosphatase [General function prediction only]

Probab=94.84  E-value=0.14  Score=51.26  Aligned_cols=102  Identities=18%  Similarity=0.288  Sum_probs=69.7

Q ss_pred             EEEEcCCceeecCCCCCcchhHHHHHHHHHHhCC---CeEEEEeCCCCCCCCCccHHHHHHHHHHhCCeEEE---cccCC
Q 017982          185 GVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFG---HDIAVFSNSAGLYEYDNDASKARKLEGKIGIKVIR---HRVKK  258 (363)
Q Consensus       185 aVV~DlDnTL~~~~~~~~~p~v~e~L~~Lk~~~G---ikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~~I~---~~~kK  258 (363)
                      +++||+|++|.  ......+++.++|+.|.+..|   ++.+.+||..+..    -..+++.+.+.||+.+-.   ....-
T Consensus        37 gfafDIDGVL~--RG~~~i~~~~~Alr~L~~~~g~lkIP~vfLTNGGg~~----E~~rA~~lS~~Lgv~Vs~dqviqSHs  110 (389)
T KOG1618|consen   37 GFAFDIDGVLF--RGHRPIPGALKALRRLVDNQGQLKIPFVFLTNGGGIL----ESSRAQELSALLGVEVSADQVIQSHS  110 (389)
T ss_pred             eEEEecccEEE--ecCCCCcchHHHHHHHHhcCCCeeccEEEEeCCCCcc----hhhHHHHHHHhhCCccCHHHHHhhcC
Confidence            57899999997  455567899999999975444   6899999998643    246888999999987421   01112


Q ss_pred             CchhHHHHHHHhCCCCCcEEEEccCCcccHHHHHHcCCeEEE
Q 017982          259 PAGTAEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGFLTIL  300 (363)
Q Consensus       259 P~p~~~~alk~lgl~pee~vmVGDrL~TDI~~A~raGi~TIl  300 (363)
                      |   |+...   ...-++++++|+.-  =..-|...|++.|-
T Consensus       111 P---~r~l~---~~~~k~vLv~G~~~--vr~vAegyGFk~Vv  144 (389)
T KOG1618|consen  111 P---FRLLV---EYHYKRVLVVGQGS--VREVAEGYGFKNVV  144 (389)
T ss_pred             h---HHHHh---hhhhceEEEecCCc--HHHHhhccCcccee
Confidence            2   22222   24567899999765  35567777887543

>COG3700 AphA Acid phosphatase (class B) [General function prediction only]

Probab=94.73  E-value=0.28  Score=45.73  Aligned_cols=83  Identities=18%  Similarity=0.128  Sum_probs=53.6

Q ss_pred             HHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCe----EEEcccCCCch-hH--HHHHHHhCCCCCcEEEEcc
Q 017982          210 IEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK----VIRHRVKKPAG-TA--EEIEKHFGCQSSQLIMVGD  282 (363)
Q Consensus       210 L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~----~I~~~~kKP~p-~~--~~alk~lgl~pee~vmVGD  282 (363)
                      |-.+.++.|-.++.+|.....    ........+++.+.+.    +++. ..||.+ .+  -..++.-+    --++-||
T Consensus       122 LI~MHq~RGD~i~FvTGRt~g----k~d~vsk~Lak~F~i~~m~pv~f~-Gdk~k~~qy~Kt~~i~~~~----~~IhYGD  192 (237)
T COG3700         122 LIDMHQRRGDAIYFVTGRTPG----KTDTVSKTLAKNFHITNMNPVIFA-GDKPKPGQYTKTQWIQDKN----IRIHYGD  192 (237)
T ss_pred             HHHHHHhcCCeEEEEecCCCC----cccccchhHHhhcccCCCcceeec-cCCCCcccccccHHHHhcC----ceEEecC
Confidence            334555779999999987631    1122344566667664    4543 346654 23  23444434    3578999


Q ss_pred             CCcccHHHHHHcCCeEEEEc
Q 017982          283 RPFTDIVYGNRNGFLTILTE  302 (363)
Q Consensus       283 rL~TDI~~A~raGi~TIlV~  302 (363)
                      +- .||.+|+.+|++.|-+.
T Consensus       193 SD-~Di~AAkeaG~RgIRil  211 (237)
T COG3700         193 SD-NDITAAKEAGARGIRIL  211 (237)
T ss_pred             Cc-hhhhHHHhcCccceeEE
Confidence            97 79999999999988776

>PRK10517 magnesium-transporting ATPase MgtA; Provisional

Probab=94.68  E-value=0.18  Score=56.85  Aligned_cols=109  Identities=15%  Similarity=0.169  Sum_probs=73.4

Q ss_pred             HHHHHcCCCEEEEcC----------------CceeecC--CCCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccH
Q 017982          176 AELQRRGFKGVVFDK----------------DNTLTAP--YSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDA  237 (363)
Q Consensus       176 ~~L~~~GIkaVV~Dl----------------DnTL~~~--~~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~  237 (363)
                      +.+.+.|.+++.+-.                |.++...  -...+.|++.+++++|+ +.|+++.++|.-.        .
T Consensus       507 ~~~a~~G~rvlavA~k~~~~~~~~~~~~~e~~l~~lGli~~~Dp~R~~a~~aI~~l~-~aGI~v~miTGD~--------~  577 (902)
T PRK10517        507 DTLNRQGLRVVAVATKYLPAREGDYQRADESDLILEGYIAFLDPPKETTAPALKALK-ASGVTVKILTGDS--------E  577 (902)
T ss_pred             HHHHhcCCEEEEEEEecCCccccccccccccCceeeehHhhhCcchhhHHHHHHHHH-HCCCEEEEEcCCC--------H
Confidence            345577888766531                2233321  23457899999999998 6899999999764        3


Q ss_pred             HHHHHHHHHhCCe-------------------------EEEcccCCCchhHHHHHHHhCCCCCcEEEEccCCcccHHHHH
Q 017982          238 SKARKLEGKIGIK-------------------------VIRHRVKKPAGTAEEIEKHFGCQSSQLIMVGDRPFTDIVYGN  292 (363)
Q Consensus       238 ~~a~~i~~~LGi~-------------------------~I~~~~kKP~p~~~~alk~lgl~pee~vmVGDrL~TDI~~A~  292 (363)
                      ..+..+.+.+|+.                         .++. .-.|.... ++.+.+.-.-+-+.|+||.. .|..+=+
T Consensus       578 ~tA~~IA~~lGI~~~~v~~G~el~~l~~~el~~~~~~~~VfA-r~sPe~K~-~IV~~Lq~~G~vVam~GDGv-NDaPALk  654 (902)
T PRK10517        578 LVAAKVCHEVGLDAGEVLIGSDIETLSDDELANLAERTTLFA-RLTPMHKE-RIVTLLKREGHVVGFMGDGI-NDAPALR  654 (902)
T ss_pred             HHHHHHHHHcCCCccCceeHHHHHhCCHHHHHHHHhhCcEEE-EcCHHHHH-HHHHHHHHCCCEEEEECCCc-chHHHHH
Confidence            6788899999985                         2332 23555432 23333333346799999999 7999888


Q ss_pred             HcCC
Q 017982          293 RNGF  296 (363)
Q Consensus       293 raGi  296 (363)
                      .|.+
T Consensus       655 ~ADV  658 (902)
T PRK10517        655 AADI  658 (902)
T ss_pred             hCCE
Confidence            7764

>TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase

Probab=94.32  E-value=0.35  Score=54.58  Aligned_cols=86  Identities=12%  Similarity=0.155  Sum_probs=61.9

Q ss_pred             CCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCe---------------------------E
Q 017982          199 SLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK---------------------------V  251 (363)
Q Consensus       199 ~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~---------------------------~  251 (363)
                      ...+.|++.+++++|+ +.|+++.++|.-.        ...+..+.+.+|+.                           .
T Consensus       577 ~Dplr~~~~~aI~~l~-~aGI~v~miTGD~--------~~tA~~iA~~~GI~~~~~~vi~G~~~~~l~~~el~~~i~~~~  647 (941)
T TIGR01517       577 KDPLRPGVREAVQECQ-RAGITVRMVTGDN--------IDTAKAIARNCGILTFGGLAMEGKEFRRLVYEEMDPILPKLR  647 (941)
T ss_pred             cCCCchhHHHHHHHHH-HCCCEEEEECCCC--------hHHHHHHHHHcCCCCCCceEeeHHHhhhCCHHHHHHHhccCe
Confidence            4467899999999998 6899999999775        36788899999984                           2


Q ss_pred             EEcccCCCchhHHHHHHHhCCCCCcEEEEccCCcccHHHHHHcCC
Q 017982          252 IRHRVKKPAGTAEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGF  296 (363)
Q Consensus       252 I~~~~kKP~p~~~~alk~lgl~pee~vmVGDrL~TDI~~A~raGi  296 (363)
                      ++. .-.|.... ++.+.+.-.-+-++|+||.. .|..+=++|-+
T Consensus       648 Vfa-r~sPe~K~-~iV~~lq~~g~vVam~GDGv-NDapALk~AdV  689 (941)
T TIGR01517       648 VLA-RSSPLDKQ-LLVLMLKDMGEVVAVTGDGT-NDAPALKLADV  689 (941)
T ss_pred             EEE-ECCHHHHH-HHHHHHHHCCCEEEEECCCC-chHHHHHhCCc
Confidence            333 33666532 23333333345799999999 79998777754

The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others.

>PRK15122 magnesium-transporting ATPase; Provisional

Probab=94.31  E-value=0.24  Score=55.74  Aligned_cols=87  Identities=11%  Similarity=0.114  Sum_probs=63.2

Q ss_pred             CCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCe-------------------------EEE
Q 017982          199 SLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK-------------------------VIR  253 (363)
Q Consensus       199 ~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~-------------------------~I~  253 (363)
                      ...+.|++.+++++|+ +.|+++.++|.-.        ...+..+.+.+|+.                         .++
T Consensus       548 ~Dp~R~~a~~aI~~l~-~aGI~v~miTGD~--------~~tA~aIA~~lGI~~~~vi~G~el~~~~~~el~~~v~~~~Vf  618 (903)
T PRK15122        548 LDPPKESAAPAIAALR-ENGVAVKVLTGDN--------PIVTAKICREVGLEPGEPLLGTEIEAMDDAALAREVEERTVF  618 (903)
T ss_pred             cCccHHHHHHHHHHHH-HCCCeEEEECCCC--------HHHHHHHHHHcCCCCCCccchHhhhhCCHHHHHHHhhhCCEE
Confidence            4567899999999998 6899999999764        36788999999985                         233


Q ss_pred             cccCCCchhHHHHHHHhCCCCCcEEEEccCCcccHHHHHHcCCe
Q 017982          254 HRVKKPAGTAEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGFL  297 (363)
Q Consensus       254 ~~~kKP~p~~~~alk~lgl~pee~vmVGDrL~TDI~~A~raGi~  297 (363)
                      .+ -.|.... ++.+.+.-.-+-++|+||.. .|..+=+.|-+.
T Consensus       619 Ar-~sPe~K~-~iV~~Lq~~G~vVamtGDGv-NDaPALk~ADVG  659 (903)
T PRK15122        619 AK-LTPLQKS-RVLKALQANGHTVGFLGDGI-NDAPALRDADVG  659 (903)
T ss_pred             EE-eCHHHHH-HHHHHHHhCCCEEEEECCCc-hhHHHHHhCCEE
Confidence            22 3566432 23333333346799999999 799887777653

>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB

Probab=94.14  E-value=0.53  Score=43.75  Aligned_cols=94  Identities=10%  Similarity=-0.027  Sum_probs=63.2

Q ss_pred             CcchhHHHHHH-HHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCC----eEEE----c-ccCC---Cch-h---H
Q 017982          201 TLWGPLSSSIE-QCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGI----KVIR----H-RVKK---PAG-T---A  263 (363)
Q Consensus       201 ~~~p~v~e~L~-~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi----~~I~----~-~~kK---P~p-~---~  263 (363)
                      .++|++.+.|+ .++ +.|++++||||+.        ...++.+.+..++    .+|.    . ..++   |+. +   .
T Consensus        94 ~l~pga~e~L~~~l~-~~G~~v~IvSas~--------~~~~~~ia~~~~~~~~~~~i~t~le~~~gg~~~g~~c~g~~Kv  164 (210)
T TIGR01545        94 TAFPLVAERLRQYLE-SSDADIWLITGSP--------QPLVEAVYFDSNFIHRLNLIASQIERGNGGWVLPLRCLGHEKV  164 (210)
T ss_pred             CCCccHHHHHHHHHH-hCCCEEEEEcCCc--------HHHHHHHHHhccccccCcEEEEEeEEeCCceEcCccCCChHHH
Confidence            46899999996 666 5799999999996        3567777766332    2331    0 1022   222 1   2


Q ss_pred             HHHHHHhCCCCCcEEEEccCCcccHHHHHHcCCeEEEEcCCC
Q 017982          264 EEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGFLTILTEPLS  305 (363)
Q Consensus       264 ~~alk~lgl~pee~vmVGDrL~TDI~~A~raGi~TIlV~p~~  305 (363)
                      ..+.+.++.+.+.+..-||+. .|+.+-..+| ..++|+|-.
T Consensus       165 ~rl~~~~~~~~~~~~aYsDS~-~D~pmL~~a~-~~~~Vnp~~  204 (210)
T TIGR01545       165 AQLEQKIGSPLKLYSGYSDSK-QDNPLLAFCE-HRWRVSKRG  204 (210)
T ss_pred             HHHHHHhCCChhheEEecCCc-ccHHHHHhCC-CcEEECcch
Confidence            334445676667788999999 7999988888 557787653

The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.

>TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC

Probab=93.78  E-value=0.51  Score=49.14  Aligned_cols=106  Identities=16%  Similarity=0.213  Sum_probs=76.8

Q ss_pred             HHHHcCCCEEEEcCCceeec--CCCCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCeEEEc
Q 017982          177 ELQRRGFKGVVFDKDNTLTA--PYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKVIRH  254 (363)
Q Consensus       177 ~L~~~GIkaVV~DlDnTL~~--~~~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~~I~~  254 (363)
                      .+.+.|.+.+.+-.++++..  .-...+.+++.+.++.|+ +.|+++.++|...        ...+..+.+.+|+   + 
T Consensus       321 ~~~~~g~~~~~~a~~~~~~g~i~l~d~lr~~~~~~i~~l~-~~gi~~~~ltGD~--------~~~a~~ia~~lgi---~-  387 (499)
T TIGR01494       321 ELAQSGLRVLAVASKETLLGLLGLEDPLRDDAKETISELR-EAGIRVIMLTGDN--------VLTAKAIAKELGI---F-  387 (499)
T ss_pred             HHHhCCCEEEEEEECCeEEEEEEecCCCchhHHHHHHHHH-HCCCeEEEEcCCC--------HHHHHHHHHHcCc---e-
Confidence            35578999888878877654  245678899999999998 5899999999775        4778888999986   2 


Q ss_pred             ccCCCchhHHHHHHHhCCCCCcEEEEccCCcccHHHHHHcCCe
Q 017982          255 RVKKPAGTAEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGFL  297 (363)
Q Consensus       255 ~~kKP~p~~~~alk~lgl~pee~vmVGDrL~TDI~~A~raGi~  297 (363)
                      +...|.... ++.+.+.-....++||||.. .|..+-+.+++-
T Consensus       388 ~~~~p~~K~-~~v~~l~~~g~~v~~vGDg~-nD~~al~~Advg  428 (499)
T TIGR01494       388 ARVTPEEKA-ALVEALQKKGRVVAMTGDGV-NDAPALKKADVG  428 (499)
T ss_pred             eccCHHHHH-HHHHHHHHCCCEEEEECCCh-hhHHHHHhCCCc
Confidence            233555422 23333333336899999998 799888777643

The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily.

>PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins []

Probab=93.75  E-value=0.38  Score=43.51  Aligned_cols=105  Identities=17%  Similarity=0.096  Sum_probs=68.2

Q ss_pred             EEEEcCCceeecCC----------CCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHh-----CC
Q 017982          185 GVVFDKDNTLTAPY----------SLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKI-----GI  249 (363)
Q Consensus       185 aVV~DlDnTL~~~~----------~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~L-----Gi  249 (363)
                      +||.|+|+||+..+          .....+++.+..+++. +.||+++-+|..+-     ......+..+...     ++
T Consensus         1 VVvsDIDGTiT~SD~~G~i~~~~G~d~~h~g~~~l~~~i~-~~GY~ilYlTaRp~-----~qa~~Tr~~L~~~~q~~~~l   74 (157)
T PF08235_consen    1 VVVSDIDGTITKSDVLGHILPILGKDWTHPGAAELYRKIA-DNGYKILYLTARPI-----GQANRTRSWLAQHQQQGHNL   74 (157)
T ss_pred             CEEEeccCCcCccchhhhhhhccCchhhhhcHHHHHHHHH-HCCeEEEEECcCcH-----HHHHHHHHHHHHHHhCCccC
Confidence            47899999998532          2245789999999998 68999999998862     1234556666666     55


Q ss_pred             e---EEEc------------ccCCCchhH-HHHHHHh----C-CCCCcEEEEccCCcccHHHHHHcCCe
Q 017982          250 K---VIRH------------RVKKPAGTA-EEIEKHF----G-CQSSQLIMVGDRPFTDIVYGNRNGFL  297 (363)
Q Consensus       250 ~---~I~~------------~~kKP~p~~-~~alk~l----g-l~pee~vmVGDrL~TDI~~A~raGi~  297 (363)
                      |   ++..            -.++|.. | ..+|+.+    . ....=..-.|.+. ||+.+=.++|+.
T Consensus        75 P~Gpv~~sP~~l~~al~rEvi~~~p~~-fK~~~L~~l~~~f~~~~~pf~agfGN~~-tDv~aY~~vGip  141 (157)
T PF08235_consen   75 PDGPVLLSPDSLFSALHREVISKDPEE-FKIACLRDLRALFPPDGNPFYAGFGNRS-TDVIAYKAVGIP  141 (157)
T ss_pred             CCCCEEECCcchhhhhhccccccChHH-HHHHHHHHHHHhcCCCCCeEEEecCCcH-HHHHHHHHcCCC
Confidence            5   2211            1245654 2 2333333    2 1111234579998 999999999996

SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance [].

>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional

Probab=93.53  E-value=0.23  Score=54.34  Aligned_cols=58  Identities=21%  Similarity=0.155  Sum_probs=46.3

Q ss_pred             CCEEEEcCCceeecCCCCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCe
Q 017982          183 FKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK  250 (363)
Q Consensus       183 IkaVV~DlDnTL~~~~~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~  250 (363)
                      .|.+++|+|+||... ....++...++|++|+ +.|+.++|+|...        ...+..+.+.+++.
T Consensus       416 ~KLIfsDLDGTLLd~-d~~i~~~t~eAL~~L~-ekGI~~VIATGRs--------~~~i~~l~~~Lgl~  473 (694)
T PRK14502        416 KKIVYTDLDGTLLNP-LTYSYSTALDALRLLK-DKELPLVFCSAKT--------MGEQDLYRNELGIK  473 (694)
T ss_pred             eeEEEEECcCCCcCC-CCccCHHHHHHHHHHH-HcCCeEEEEeCCC--------HHHHHHHHHHcCCC
Confidence            578999999999863 3345678899999998 5799999999886        35677788888864

>COG3882 FkbH Predicted enzyme involved in methoxymalonyl-ACP biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]

Probab=93.11  E-value=1.1  Score=47.30  Aligned_cols=111  Identities=20%  Similarity=0.201  Sum_probs=69.9

Q ss_pred             cCCCEEEEcCCceeecC----C-----------CCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHH
Q 017982          181 RGFKGVVFDKDNTLTAP----Y-----------SLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEG  245 (363)
Q Consensus       181 ~GIkaVV~DlDnTL~~~----~-----------~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~  245 (363)
                      .-.|++|+|+||||..-    .           .-..+......+..|+ +.|+-++|.|-+.        ...|+.+..
T Consensus       220 ~~kK~LVLDLDNTLWGGVIGedGv~GI~Ls~~~~G~~fk~fQ~~Ik~l~-kqGVlLav~SKN~--------~~da~evF~  290 (574)
T COG3882         220 KSKKALVLDLDNTLWGGVIGEDGVDGIRLSNSAEGEAFKTFQNFIKGLK-KQGVLLAVCSKNT--------EKDAKEVFR  290 (574)
T ss_pred             cccceEEEecCCcccccccccccccceeecCCCCchhHHHHHHHHHHHH-hccEEEEEecCCc--------hhhHHHHHh
Confidence            45689999999999430    0           0124556677788888 6899999999664        234443332


Q ss_pred             Hh--------CCeEEEcccCCCch-hHHHHHHHhCCCCCcEEEEccCCcccHHHHHHcCCeEEEEcCC
Q 017982          246 KI--------GIKVIRHRVKKPAG-TAEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGFLTILTEPL  304 (363)
Q Consensus       246 ~L--------Gi~~I~~~~kKP~p-~~~~alk~lgl~pee~vmVGDrL~TDI~~A~raGi~TIlV~p~  304 (363)
                      .-        ++..... .--|.. .++++++++++..+..++|.|... .-.--++.+=  |-|.+.
T Consensus       291 khp~MiLkeedfa~~~i-NW~~K~eNirkIAkklNlg~dSmvFiDD~p~-ErE~vk~~~~--v~Vi~~  354 (574)
T COG3882         291 KHPDMILKEEDFAVFQI-NWDPKAENIRKIAKKLNLGLDSMVFIDDNPA-ERELVKRELP--VSVIEF  354 (574)
T ss_pred             hCCCeEeeHhhhhhhee-cCCcchhhHHHHHHHhCCCccceEEecCCHH-HHHHHHhcCc--eeeccC
Confidence            21        1111101 113333 478999999999999999999983 5555555543  444444

>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein

Probab=92.93  E-value=0.15  Score=46.76  Aligned_cols=41  Identities=15%  Similarity=0.239  Sum_probs=34.6

Q ss_pred             cCCCchhHHHHHHHhCCCCCcEEEEccCCcccHHHHHHcCCeE
Q 017982          256 VKKPAGTAEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGFLT  298 (363)
Q Consensus       256 ~kKP~p~~~~alk~lgl~pee~vmVGDrL~TDI~~A~raGi~T  298 (363)
                      ..|+. ++..+++.+|++++++++|||+. +|+.+...+|...
T Consensus       178 ~~Kg~-al~~l~~~lgi~~~~vi~~GD~~-NDi~ml~~ag~~v  218 (221)
T TIGR02463       178 SSKGK-AANWLKATYNQPDVKTLGLGDGP-NDLPLLEVADYAV  218 (221)
T ss_pred             CCHHH-HHHHHHHHhCCCCCcEEEECCCH-HHHHHHHhCCceE
Confidence            34544 36889999999999999999999 7999999999653

This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.

>COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only]

Probab=92.79  E-value=0.24  Score=47.55  Aligned_cols=58  Identities=21%  Similarity=0.260  Sum_probs=42.6

Q ss_pred             CCCEEEEcCCceeecCCCCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCe
Q 017982          182 GFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK  250 (363)
Q Consensus       182 GIkaVV~DlDnTL~~~~~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~  250 (363)
                      -+++++.|+|+||.. +..+ +..+.+++.+|+ +.|+.|+.+|.+.        ......+-+.+|++
T Consensus         6 ~~~lIFtDlD~TLl~-~~ye-~~pA~pv~~el~-d~G~~Vi~~SSKT--------~aE~~~l~~~l~v~   63 (274)
T COG3769           6 MPLLIFTDLDGTLLP-HSYE-WQPAAPVLLELK-DAGVPVILCSSKT--------RAEMLYLQKSLGVQ   63 (274)
T ss_pred             cceEEEEcccCcccC-CCCC-CCccchHHHHHH-HcCCeEEEeccch--------HHHHHHHHHhcCCC
Confidence            467788999999986 2322 334567899998 6899999999985        24455666777765

>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional

Probab=92.02  E-value=0.42  Score=52.37  Aligned_cols=50  Identities=16%  Similarity=0.092  Sum_probs=40.1

Q ss_pred             HHcCCCEEEEcCCceeecCC----CCCcchhHHHHHHHHHHhCCCeEEEEeCCC
Q 017982          179 QRRGFKGVVFDKDNTLTAPY----SLTLWGPLSSSIEQCKSVFGHDIAVFSNSA  228 (363)
Q Consensus       179 ~~~GIkaVV~DlDnTL~~~~----~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~  228 (363)
                      ++...+.+++|+|+||+...    ...+.+++.++|++|.+..|..++|+|..+
T Consensus       488 ~~~~~rLi~~D~DGTL~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~ivSGR~  541 (726)
T PRK14501        488 RAASRRLLLLDYDGTLVPFAPDPELAVPDKELRDLLRRLAADPNTDVAIISGRD  541 (726)
T ss_pred             HhccceEEEEecCccccCCCCCcccCCCCHHHHHHHHHHHcCCCCeEEEEeCCC
Confidence            45678999999999998632    224578999999999854689999999886

>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB

Probab=91.65  E-value=0.17  Score=45.69  Aligned_cols=35  Identities=14%  Similarity=0.233  Sum_probs=31.9

Q ss_pred             hHHHHHHHhCCCCCcEEEEccCCcccHHHHHHcCCe
Q 017982          262 TAEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGFL  297 (363)
Q Consensus       262 ~~~~alk~lgl~pee~vmVGDrL~TDI~~A~raGi~  297 (363)
                      .++.++++++++++++++|||+. +|+.++..+|+.
T Consensus       167 ~~~~~~~~~~~~~~~~~~~GD~~-nD~~~~~~~~~~  201 (204)
T TIGR01484       167 ALQALLKELNGKRDEILAFGDSG-NDEEMFEVAGLA  201 (204)
T ss_pred             HHHHHHHHhCCCHHHEEEEcCCH-HHHHHHHHcCCc
Confidence            46888999999999999999998 899999999875

The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.

>COG4359 Uncharacterized conserved protein [Function unknown]

Probab=91.21  E-value=1.1  Score=41.92  Aligned_cols=85  Identities=15%  Similarity=0.146  Sum_probs=53.3

Q ss_pred             CcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhC----Ce---EEE----------cccCCC--ch
Q 017982          201 TLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIG----IK---VIR----------HRVKKP--AG  261 (363)
Q Consensus       201 ~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LG----i~---~I~----------~~~kKP--~p  261 (363)
                      .+-|+.+++++.++ +.+++++|||.+.     +   ..+..+.+.++    +.   .++          |.+.-|  ++
T Consensus        73 ~Idp~fKef~e~ik-e~di~fiVvSsGm-----~---~fI~~lfe~ivgke~i~~idi~sn~~~ih~dg~h~i~~~~ds~  143 (220)
T COG4359          73 KIDPGFKEFVEWIK-EHDIPFIVVSSGM-----D---PFIYPLFEGIVGKERIYCIDIVSNNDYIHIDGQHSIKYTDDSQ  143 (220)
T ss_pred             ccCccHHHHHHHHH-HcCCCEEEEeCCC-----c---hHHHHHHHhhccccceeeeEEeecCceEcCCCceeeecCCccc
Confidence            45677788888887 5788999999885     2   34555555544    21   111          111111  11


Q ss_pred             -hH--HHHHHHhCCCCCcEEEEccCCcccHHHHHHcC
Q 017982          262 -TA--EEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNG  295 (363)
Q Consensus       262 -~~--~~alk~lgl~pee~vmVGDrL~TDI~~A~raG  295 (363)
                       +.  -..++.+.-.++.++|+||+. +|+.+|+..-
T Consensus       144 fG~dK~~vI~~l~e~~e~~fy~GDsv-sDlsaaklsD  179 (220)
T COG4359         144 FGHDKSSVIHELSEPNESIFYCGDSV-SDLSAAKLSD  179 (220)
T ss_pred             cCCCcchhHHHhhcCCceEEEecCCc-ccccHhhhhh
Confidence             11  134555666778899999999 8999998654

>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed

Probab=91.04  E-value=0.27  Score=46.92  Aligned_cols=40  Identities=15%  Similarity=0.286  Sum_probs=34.6

Q ss_pred             hHHHHHHHhCCCC-CcEEEEccCCcccHHHHHHcCCeEEEEc
Q 017982          262 TAEEIEKHFGCQS-SQLIMVGDRPFTDIVYGNRNGFLTILTE  302 (363)
Q Consensus       262 ~~~~alk~lgl~p-ee~vmVGDrL~TDI~~A~raGi~TIlV~  302 (363)
                      ++.++++.+|+++ +++++|||+. +|+.++..+|+..+.-+
T Consensus       194 al~~l~~~~~i~~~~~v~~~GDs~-NDi~m~~~ag~~vam~N  234 (273)
T PRK00192        194 AVRWLKELYRRQDGVETIALGDSP-NDLPMLEAADIAVVVPG  234 (273)
T ss_pred             HHHHHHHHHhccCCceEEEEcCCh-hhHHHHHhCCeeEEeCC
Confidence            4688899999999 9999999999 79999999997654444

>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial

Probab=90.84  E-value=0.25  Score=45.90  Aligned_cols=39  Identities=13%  Similarity=0.181  Sum_probs=33.0

Q ss_pred             hHHHHHHHhCCCCCcEEEEccCCcccHHHHHHcCCeEEEEc
Q 017982          262 TAEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGFLTILTE  302 (363)
Q Consensus       262 ~~~~alk~lgl~pee~vmVGDrL~TDI~~A~raGi~TIlV~  302 (363)
                      ++..+++++|++++++++|||+. +|+.+...+|. ++.|.
T Consensus       163 al~~l~~~~g~~~~~~i~~GD~~-nD~~ml~~~~~-~iav~  201 (236)
T TIGR02471       163 ALRYLSYRWGLPLEQILVAGDSG-NDEEMLRGLTL-GVVVG  201 (236)
T ss_pred             HHHHHHHHhCCCHHHEEEEcCCc-cHHHHHcCCCc-EEEEc
Confidence            35889999999999999999998 89999998874 45553

Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.

>PLN03017 trehalose-phosphatase

Probab=90.76  E-value=0.59  Score=47.63  Aligned_cols=44  Identities=14%  Similarity=0.164  Sum_probs=35.1

Q ss_pred             CCEEEEcCCceeec----CCCCCcchhHHHHHHHHHHhCCCeEEEEeCCC
Q 017982          183 FKGVVFDKDNTLTA----PYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSA  228 (363)
Q Consensus       183 IkaVV~DlDnTL~~----~~~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~  228 (363)
                      -.++++|+|+||..    +....+.+++.++|++|.  .|+.++|+|..+
T Consensus       111 ~~llflD~DGTL~Piv~~p~~a~i~~~~~~aL~~La--~~~~vaIvSGR~  158 (366)
T PLN03017        111 QIVMFLDYDGTLSPIVDDPDKAFMSSKMRRTVKKLA--KCFPTAIVTGRC  158 (366)
T ss_pred             CeEEEEecCCcCcCCcCCcccccCCHHHHHHHHHHh--cCCcEEEEeCCC
Confidence            34667799999982    344468899999999998  378999999886

>PLN02151 trehalose-phosphatase

Probab=90.57  E-value=0.61  Score=47.34  Aligned_cols=43  Identities=16%  Similarity=0.203  Sum_probs=35.6

Q ss_pred             CEEEEcCCceee----cCCCCCcchhHHHHHHHHHHhCCCeEEEEeCCC
Q 017982          184 KGVVFDKDNTLT----APYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSA  228 (363)
Q Consensus       184 kaVV~DlDnTL~----~~~~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~  228 (363)
                      .++++|+|+||.    .+....+.+++.++|+.|.+  +..++|+|..+
T Consensus        99 ~ll~lDyDGTL~PIv~~P~~A~~~~~~~~aL~~La~--~~~vaIvSGR~  145 (354)
T PLN02151         99 IVMFLDYDGTLSPIVDDPDRAFMSKKMRNTVRKLAK--CFPTAIVSGRC  145 (354)
T ss_pred             eEEEEecCccCCCCCCCcccccCCHHHHHHHHHHhc--CCCEEEEECCC
Confidence            467789999998    45555788999999999973  56999999886

>KOG2630 consensus Enolase-phosphatase E-1 [Amino acid transport and metabolism]

Probab=90.57  E-value=1.3  Score=42.70  Aligned_cols=95  Identities=18%  Similarity=0.268  Sum_probs=67.8

Q ss_pred             CcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhC----C-eEEE------cccCCCchhHHHHHHH
Q 017982          201 TLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIG----I-KVIR------HRVKKPAGTAEEIEKH  269 (363)
Q Consensus       201 ~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LG----i-~~I~------~~~kKP~p~~~~alk~  269 (363)
                      .+++++..+++..+ ..|++++|.|...         ..+.+++-...    + +++.      .+.|.-...+.+|.+.
T Consensus       123 ~v~aDv~~a~e~w~-~~g~~vyIYSSgs---------v~AqKllfg~s~~gdl~~y~~gyfDt~iG~K~e~~sy~~I~~~  192 (254)
T KOG2630|consen  123 HVYADVLPAIERWS-GEGVRVYIYSSGS---------VAAQKLLFGYSDAGDLRKYISGYFDTTIGLKVESQSYKKIGHL  192 (254)
T ss_pred             cccchhHHHHHHHh-hcCceEEEEcCCc---------HHHHHHHHcccCcchHHHHhhhhhhccccceehhHHHHHHHHH
Confidence            57899999999988 6899999999875         22333222111    1 0111      1223333367889999


Q ss_pred             hCCCCCcEEEEccCCcccHHHHHHcCCeEEEEc-CCCC
Q 017982          270 FGCQSSQLIMVGDRPFTDIVYGNRNGFLTILTE-PLSL  306 (363)
Q Consensus       270 lgl~pee~vmVGDrL~TDI~~A~raGi~TIlV~-p~~~  306 (363)
                      +|.++.++++.-|-. .-..+|+.+|+.+.++. |++.
T Consensus       193 Ig~s~~eiLfLTd~~-~Ea~aa~~aGl~a~l~~rPgna  229 (254)
T KOG2630|consen  193 IGKSPREILFLTDVP-REAAAARKAGLQAGLVSRPGNA  229 (254)
T ss_pred             hCCChhheEEeccCh-HHHHHHHhcccceeeeecCCCC
Confidence            999999999999987 67899999999998874 6654

>TIGR02245 HAD_IIID1 HAD-superfamily subfamily IIID hydrolase, TIGR02245

Probab=90.43  E-value=0.76  Score=42.83  Aligned_cols=60  Identities=23%  Similarity=0.216  Sum_probs=46.1

Q ss_pred             HcCCCEEEEcCCceeecCCC------CCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCC
Q 017982          180 RRGFKGVVFDKDNTLTAPYS------LTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGI  249 (363)
Q Consensus       180 ~~GIkaVV~DlDnTL~~~~~------~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi  249 (363)
                      +.|.+.+|+|+|.||.....      .-.-|.+.++|+.+.+  .|.|+|-|.+.        ..-+..++..+|+
T Consensus        18 ~~~kklLVLDLDeTLvh~~~~~~~~~~~kRP~l~eFL~~~~~--~feIvVwTAa~--------~~ya~~~l~~l~~   83 (195)
T TIGR02245        18 REGKKLLVLDIDYTLFDHRSPAETGEELMRPYLHEFLTSAYE--DYDIVIWSATS--------MKWIEIKMTELGV   83 (195)
T ss_pred             CCCCcEEEEeCCCceEcccccCCCceEEeCCCHHHHHHHHHh--CCEEEEEecCC--------HHHHHHHHHHhcc
Confidence            46899999999999985321      1246899999999984  67999999885        3567777777653

This family of sequences appears to belong to the Haloacid Dehalogenase (HAD) superfamily of enzymes by virtue of the presence of three catalytic domains, in this case: LLVLD(ILV)D(YH)T, I(VMG)IWS, and (DN)(VC)K(PA)Lx{15-17}T(IL)(MH)(FV)DD(IL)(GRS)(RK)N. Since this family has no large "cap" domain between motifs 1 and 2 or between 2 and 3, it is formally a "class III" HAD.

>PLN02580 trehalose-phosphatase

Probab=89.77  E-value=1.1  Score=46.07  Aligned_cols=47  Identities=17%  Similarity=0.299  Sum_probs=36.5

Q ss_pred             HcCCCEEEEcCCceeec----CCCCCcchhHHHHHHHHHHhCCCeEEEEeCCC
Q 017982          180 RRGFKGVVFDKDNTLTA----PYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSA  228 (363)
Q Consensus       180 ~~GIkaVV~DlDnTL~~----~~~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~  228 (363)
                      +..-.++++|+|+||+.    +....+.+++.+.|++|.+ . .+++|||..+
T Consensus       116 ~~k~~~LfLDyDGTLaPIv~~Pd~A~~s~~~~~aL~~La~-~-~~VAIVSGR~  166 (384)
T PLN02580        116 KGKKIALFLDYDGTLSPIVDDPDRALMSDAMRSAVKNVAK-Y-FPTAIISGRS  166 (384)
T ss_pred             hcCCeEEEEecCCccCCCCCCcccccCCHHHHHHHHHHhh-C-CCEEEEeCCC
Confidence            34455778899999974    3444678999999999984 3 4899999886

>PLN02423 phosphomannomutase

Probab=89.69  E-value=0.56  Score=44.52  Aligned_cols=44  Identities=20%  Similarity=0.146  Sum_probs=34.8

Q ss_pred             CCCEEE-EcCCceeecCCCCCcchhHHHHHHHHHHhCCCeEEEEeCCC
Q 017982          182 GFKGVV-FDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSA  228 (363)
Q Consensus       182 GIkaVV-~DlDnTL~~~~~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~  228 (363)
                      ..+.++ +|+|+||.. ....+.+...++|++|+ +. +.++|+|...
T Consensus         5 ~~~~i~~~D~DGTLl~-~~~~i~~~~~~ai~~l~-~~-i~fviaTGR~   49 (245)
T PLN02423          5 KPGVIALFDVDGTLTA-PRKEATPEMLEFMKELR-KV-VTVGVVGGSD   49 (245)
T ss_pred             ccceEEEEeccCCCcC-CCCcCCHHHHHHHHHHH-hC-CEEEEECCcC
Confidence            456555 999999986 44457889999999998 44 8999999774

>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily

Probab=89.24  E-value=0.38  Score=45.13  Aligned_cols=35  Identities=20%  Similarity=0.328  Sum_probs=32.3

Q ss_pred             hHHHHHHHhCCCCCcEEEEccCCcccHHHHHHcCCe
Q 017982          262 TAEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGFL  297 (363)
Q Consensus       262 ~~~~alk~lgl~pee~vmVGDrL~TDI~~A~raGi~  297 (363)
                      +++.+++.+|++++++++|||+. .|+.+...+|+.
T Consensus       192 ~i~~~~~~~~~~~~~~~~~GD~~-nD~~m~~~~~~~  226 (256)
T TIGR00099       192 ALQSLAEALGISLEDVIAFGDGM-NDIEMLEAAGYG  226 (256)
T ss_pred             HHHHHHHHcCCCHHHEEEeCCcH-HhHHHHHhCCce
Confidence            46889999999999999999999 799999999975

The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.

>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional

Probab=89.14  E-value=1.2  Score=49.66  Aligned_cols=66  Identities=21%  Similarity=0.179  Sum_probs=47.0

Q ss_pred             HHHcCCCEEEEcCCceeecCCC-------CCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCe
Q 017982          178 LQRRGFKGVVFDKDNTLTAPYS-------LTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK  250 (363)
Q Consensus       178 L~~~GIkaVV~DlDnTL~~~~~-------~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~  250 (363)
                      ++...-+++++|+|+||+....       ..+.|++.+.|++|.+..+-.|+|||..+        ...++.+....++.
T Consensus       502 y~~a~~rll~LDyDGTL~~~~~~~~~p~~a~p~~~l~~~L~~L~~d~~~~V~IvSGR~--------~~~L~~~~~~~~l~  573 (797)
T PLN03063        502 YSKSNNRLLILGFYGTLTEPRNSQIKEMDLGLHPELKETLKALCSDPKTTVVVLSRSG--------KDILDKNFGEYNIW  573 (797)
T ss_pred             HHhccCeEEEEecCccccCCCCCccccccCCCCHHHHHHHHHHHcCCCCEEEEEeCCC--------HHHHHHHhCCCCCc
Confidence            3456668999999999985422       23678999999999865566899999885        34555555544444


Q ss_pred             E
Q 017982          251 V  251 (363)
Q Consensus       251 ~  251 (363)
                      .
T Consensus       574 l  574 (797)
T PLN03063        574 L  574 (797)
T ss_pred             E
Confidence            3

>KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only]

Probab=89.12  E-value=1.4  Score=42.38  Aligned_cols=84  Identities=19%  Similarity=0.251  Sum_probs=51.3

Q ss_pred             CcchhHHHHHHHHHHhCC-CeEEEEeCCCCCCCCCccHHHHHHHHHHhCCeE-------------------EE-----cc
Q 017982          201 TLWGPLSSSIEQCKSVFG-HDIAVFSNSAGLYEYDNDASKARKLEGKIGIKV-------------------IR-----HR  255 (363)
Q Consensus       201 ~~~p~v~e~L~~Lk~~~G-ikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~~-------------------I~-----~~  255 (363)
                      ...|++.++++.++ +.| +.+.|||....        -.++.++++.|+.-                   |.     |.
T Consensus        84 P~~Pgmv~lik~~a-k~g~~eliIVSDaNs--------fFIe~~Lea~~~~d~F~~IfTNPa~~da~G~L~v~pyH~~hs  154 (256)
T KOG3120|consen   84 PIVPGMVRLIKSAA-KLGCFELIIVSDANS--------FFIEEILEAAGIHDLFSEIFTNPACVDASGRLLVRPYHTQHS  154 (256)
T ss_pred             CCCccHHHHHHHHH-hCCCceEEEEecCch--------hHHHHHHHHccHHHHHHHHhcCCcccCCCCcEEeecCCCCCc
Confidence            35788888888887 456 48999997753        34566666666531                   11     11


Q ss_pred             cC--CCch----hHHHHHHH---hCCCCCcEEEEccCCcccHHHHHHc
Q 017982          256 VK--KPAG----TAEEIEKH---FGCQSSQLIMVGDRPFTDIVYGNRN  294 (363)
Q Consensus       256 ~k--KP~p----~~~~alk~---lgl~pee~vmVGDrL~TDI~~A~ra  294 (363)
                      +.  +++-    .++++...   -|+..++.++|||.- .|+-.-.+.
T Consensus       155 C~~CPsNmCKg~Vl~~~~~s~~~~gv~yer~iYvGDG~-nD~CP~l~L  201 (256)
T KOG3120|consen  155 CNLCPSNMCKGLVLDELVASQLKDGVRYERLIYVGDGA-NDFCPVLRL  201 (256)
T ss_pred             cCcCchhhhhhHHHHHHHHHHhhcCCceeeEEEEcCCC-CCcCcchhc
Confidence            11  2221    13332222   278888999999998 688665443

>KOG2469 consensus IMP-GMP specific 5'-nucleotidase [Nucleotide transport and metabolism]

Probab=88.93  E-value=0.95  Score=46.64  Aligned_cols=52  Identities=19%  Similarity=0.410  Sum_probs=42.2

Q ss_pred             HHHHHHHhCCCCCcEEEEccCCcccHHHHH-HcCCeEEEEcCCCCCCchhHHH
Q 017982          263 AEEIEKHFGCQSSQLIMVGDRPFTDIVYGN-RNGFLTILTEPLSLAEEPFIVR  314 (363)
Q Consensus       263 ~~~alk~lgl~pee~vmVGDrL~TDI~~A~-raGi~TIlV~p~~~~~e~~~t~  314 (363)
                      .+.+++.+++.-.++++|||.++.||.-.+ +-|.+|++|-|....+...++.
T Consensus       293 ~~~~~~~l~~~g~diLy~gdHi~~dvl~skk~~~wrt~lv~peL~~e~~v~~~  345 (424)
T KOG2469|consen  293 LKTVETSMKVKGKDILYGGDHIWGDVLVSKKRRGWRTVLVAPELEREDLVLLD  345 (424)
T ss_pred             HHHHHHHhcccccceeecccceeeeEEecceecceEEEEEehhhhhhhhhhcc
Confidence            366778888888999999999999998755 7799999998877665555554

>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]

Probab=88.80  E-value=1.3  Score=49.93  Aligned_cols=59  Identities=12%  Similarity=0.103  Sum_probs=44.6

Q ss_pred             ccCCChHH----HHHcCCCEEEEcCCceeecCC--CCCcchhHHHHHHHHHHhCCCeEEEEeCCC
Q 017982          170 IRYIDWAE----LQRRGFKGVVFDKDNTLTAPY--SLTLWGPLSSSIEQCKSVFGHDIAVFSNSA  228 (363)
Q Consensus       170 I~~Id~~~----L~~~GIkaVV~DlDnTL~~~~--~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~  228 (363)
                      +..++.+.    .+....+++++|+|+||....  ...+.+++.+.|++|.+..|..++|+|..+
T Consensus       579 ~~~l~~~~i~~~y~~~~~rlI~LDyDGTLlp~~~~~~~p~~~~~~~L~~L~~d~g~~VaIvSGR~  643 (854)
T PLN02205        579 FRKLSMEHIVSAYKRTTTRAILLDYDGTLMPQASIDKSPSSKSIDILNTLCRDKNNMVFIVSARS  643 (854)
T ss_pred             ccccCHHHHHHHHHhhcCeEEEEecCCcccCCccccCCCCHHHHHHHHHHHhcCCCEEEEEeCCC
Confidence            44455443    346788999999999998543  235668999999998556788999999886

>PF05152 DUF705: Protein of unknown function (DUF705); InterPro: IPR007827 This family contains uncharacterised baculoviral proteins

Probab=88.34  E-value=1.5  Score=43.32  Aligned_cols=58  Identities=19%  Similarity=0.186  Sum_probs=44.0

Q ss_pred             CEEEEcCCceeecCCCC--CcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCe
Q 017982          184 KGVVFDKDNTLTAPYSL--TLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK  250 (363)
Q Consensus       184 kaVV~DlDnTL~~~~~~--~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~  250 (363)
                      .+||||+|+||......  ...|.+.+.|.+|+ +.|..+++=|-+.        .+.+..-++.++++
T Consensus       123 hVIVfDlD~TLItd~~~v~Ir~~~v~~sL~~Lk-~~g~vLvLWSyG~--------~eHV~~sl~~~~L~  182 (297)
T PF05152_consen  123 HVIVFDLDSTLITDEGDVRIRDPAVYDSLRELK-EQGCVLVLWSYGN--------REHVRHSLKELKLE  182 (297)
T ss_pred             cEEEEECCCcccccCCccccCChHHHHHHHHHH-HcCCEEEEecCCC--------HHHHHHHHHHhCCc
Confidence            58999999999853332  35688999999999 5786677777664        46777888888876

>TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type

Probab=87.99  E-value=2  Score=49.39  Aligned_cols=86  Identities=14%  Similarity=0.183  Sum_probs=60.1

Q ss_pred             CCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCe---------------E-------------
Q 017982          200 LTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK---------------V-------------  251 (363)
Q Consensus       200 ~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~---------------~-------------  251 (363)
                      ..+.|++.+++++|+ +.|+++.++|.-.        ...+..+.+.+|+.               +             
T Consensus       645 Dp~r~~v~~aI~~l~-~aGIkv~MiTGD~--------~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~vitG~~l~~l~~~~  715 (1053)
T TIGR01523       645 DPPRNESAGAVEKCH-QAGINVHMLTGDF--------PETAKAIAQEVGIIPPNFIHDRDEIMDSMVMTGSQFDALSDEE  715 (1053)
T ss_pred             cCCchhHHHHHHHHH-HCCCEEEEECCCC--------HHHHHHHHHHcCCCCccccccccccccceeeehHHhhhcCHHH
Confidence            357889999999998 6899999999775        36677888888872               0             


Q ss_pred             ---------EEcccCCCchhHHHHHHHhCCCCCcEEEEccCCcccHHHHHHcCCe
Q 017982          252 ---------IRHRVKKPAGTAEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGFL  297 (363)
Q Consensus       252 ---------I~~~~kKP~p~~~~alk~lgl~pee~vmVGDrL~TDI~~A~raGi~  297 (363)
                               ++. .-.|.... .+++.+.-.-+.++|+||.. .|..+=+.|.+.
T Consensus       716 l~~~~~~~~V~a-r~sP~~K~-~iV~~lq~~g~~Vam~GDGv-NDapaLk~AdVG  767 (1053)
T TIGR01523       716 VDDLKALCLVIA-RCAPQTKV-KMIEALHRRKAFCAMTGDGV-NDSPSLKMANVG  767 (1053)
T ss_pred             HHHHhhcCeEEE-ecCHHHHH-HHHHHHHhcCCeeEEeCCCc-chHHHHHhCCcc
Confidence                     111 22444321 23344433446799999999 899998887653

The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump.

>COG5610 Predicted hydrolase (HAD superfamily) [General function prediction only]

Probab=87.81  E-value=1.4  Score=46.34  Aligned_cols=88  Identities=18%  Similarity=0.183  Sum_probs=65.9

Q ss_pred             HHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCe-----EEE---cccCCCch-hHHHHHHHhCCCCCcE
Q 017982          207 SSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK-----VIR---HRVKKPAG-TAEEIEKHFGCQSSQL  277 (363)
Q Consensus       207 ~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~-----~I~---~~~kKP~p-~~~~alk~lgl~pee~  277 (363)
                      .+..+.+. ..|.+|+++|.---     | .+..+.++..+|-+     +..   ...+|-+. .|..+++.-++++.+.
T Consensus       105 ~eL~e~ai-~n~krVIlISDMYl-----p-s~Il~~~L~s~g~d~~nipiY~S~e~rl~KnSg~LFk~Vlk~EnVd~~~w  177 (635)
T COG5610         105 IELVEEAI-KNEKRVILISDMYL-----P-SSILRTFLNSFGPDFNNIPIYMSSEFRLKKNSGNLFKAVLKLENVDPKKW  177 (635)
T ss_pred             hHHHHHHH-hCCCeEEEEecccC-----c-HHHHHHHHHhcCCCccCceeeecceeehhcccchHHHHHHhhcCCChhhe
Confidence            34556665 45889999998741     2 45678888888754     221   23456555 4678888889999999


Q ss_pred             EEEccCCcccHHHHHHcCCeEEEE
Q 017982          278 IMVGDRPFTDIVYGNRNGFLTILT  301 (363)
Q Consensus       278 vmVGDrL~TDI~~A~raGi~TIlV  301 (363)
                      ++|||....|++.++.+|+.|...
T Consensus       178 ~H~GDN~~aD~l~pk~LgI~Tlf~  201 (635)
T COG5610         178 IHCGDNWVADYLKPKNLGISTLFY  201 (635)
T ss_pred             EEecCchhhhhcCccccchhHHHH
Confidence            999999999999999999988654

>PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional

Probab=87.26  E-value=2.1  Score=48.70  Aligned_cols=67  Identities=21%  Similarity=0.174  Sum_probs=47.8

Q ss_pred             HHHcCCCEEEEcCCceeecCC-------------CCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHH
Q 017982          178 LQRRGFKGVVFDKDNTLTAPY-------------SLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLE  244 (363)
Q Consensus       178 L~~~GIkaVV~DlDnTL~~~~-------------~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~  244 (363)
                      ++...-+++++|+|+||+...             ...+.|++.+.|+.|.+..+-.|+|||..+        ...++.++
T Consensus       586 y~~a~~RLlfLDyDGTLap~~~~P~~~~~~~~~~~a~p~p~l~~~L~~L~~dp~n~VaIVSGR~--------~~~Le~~f  657 (934)
T PLN03064        586 YLQSNNRLLILGFNATLTEPVDTPGRRGDQIKEMELRLHPELKEPLRALCSDPKTTIVVLSGSD--------RSVLDENF  657 (934)
T ss_pred             HHhccceEEEEecCceeccCCCCcccccccccccccCCCHHHHHHHHHHHhCCCCeEEEEeCCC--------HHHHHHHh
Confidence            346667899999999998531             223568899999999865566899999986        35566666


Q ss_pred             HHhCCeEE
Q 017982          245 GKIGIKVI  252 (363)
Q Consensus       245 ~~LGi~~I  252 (363)
                      ..+++..+
T Consensus       658 g~~~L~La  665 (934)
T PLN03064        658 GEFDMWLA  665 (934)
T ss_pred             CCCCceEE
Confidence            55555433

>COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism]

Probab=86.69  E-value=1.9  Score=42.20  Aligned_cols=49  Identities=22%  Similarity=0.153  Sum_probs=37.8

Q ss_pred             HcCCCEEEEcCCceeec----CCCCCcchhHHHHHHHHHHhCCCeEEEEeCCC
Q 017982          180 RRGFKGVVFDKDNTLTA----PYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSA  228 (363)
Q Consensus       180 ~~GIkaVV~DlDnTL~~----~~~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~  228 (363)
                      ...-+++++|+|+||+.    +....+.+++.+.|++|..+....++|+|..+
T Consensus        15 ~a~~~~~~lDyDGTl~~i~~~p~~a~~~~~l~~lL~~Las~~~~~v~iiSGR~   67 (266)
T COG1877          15 NARKRLLFLDYDGTLTEIVPHPEAAVPDDRLLSLLQDLASDPRNVVAIISGRS   67 (266)
T ss_pred             cccceEEEEeccccccccccCccccCCCHHHHHHHHHHHhcCCCeEEEEeCCC
Confidence            45678999999999974    33445788999999999854434599999875

>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial

Probab=86.09  E-value=0.97  Score=41.97  Aligned_cols=53  Identities=15%  Similarity=0.163  Sum_probs=38.4

Q ss_pred             EEEcCCceeecCCCCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCe
Q 017982          186 VVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK  250 (363)
Q Consensus       186 VV~DlDnTL~~~~~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~  250 (363)
                      +++|+|+||.. ....+ ++..++++ ++ +.|+.++|+|..+        ...+..++..+++.
T Consensus         2 i~~DlDgTLl~-~~~~~-~~~~~~~~-~~-~~gi~~viaTGR~--------~~~v~~~~~~l~l~   54 (236)
T TIGR02471         2 IITDLDNTLLG-DDEGL-ASFVELLR-GS-GDAVGFGIATGRS--------VESAKSRYAKLNLP   54 (236)
T ss_pred             eEEeccccccC-CHHHH-HHHHHHHH-hc-CCCceEEEEeCCC--------HHHHHHHHHhCCCC
Confidence            67899999985 33333 34446676 45 5799999999886        46778888888763

Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.

>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []

Probab=86.08  E-value=1.1  Score=40.48  Aligned_cols=39  Identities=18%  Similarity=0.296  Sum_probs=33.4

Q ss_pred             hHHHHHHHhCCCCCcEEEEccCCcccHHHHHHcCCeEEEEc
Q 017982          262 TAEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGFLTILTE  302 (363)
Q Consensus       262 ~~~~alk~lgl~pee~vmVGDrL~TDI~~A~raGi~TIlV~  302 (363)
                      +++.+++.+|++++++++|||+. .|+.+-..+|.. +.+.
T Consensus       190 ai~~l~~~~~i~~~~~~~~GD~~-ND~~Ml~~~~~~-~am~  228 (254)
T PF08282_consen  190 AIKYLLEYLGISPEDIIAFGDSE-NDIEMLELAGYS-VAMG  228 (254)
T ss_dssp             HHHHHHHHHTTSGGGEEEEESSG-GGHHHHHHSSEE-EEET
T ss_pred             HHHHHhhhcccccceeEEeeccc-ccHhHHhhcCeE-EEEc
Confidence            46888999999999999999999 899999999853 4444

This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....

>PRK10513 sugar phosphate phosphatase; Provisional

Probab=85.37  E-value=0.96  Score=42.58  Aligned_cols=35  Identities=20%  Similarity=0.443  Sum_probs=32.0

Q ss_pred             hHHHHHHHhCCCCCcEEEEccCCcccHHHHHHcCCe
Q 017982          262 TAEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGFL  297 (363)
Q Consensus       262 ~~~~alk~lgl~pee~vmVGDrL~TDI~~A~raGi~  297 (363)
                      +++.+++.+|+++++++.|||.. .|+.+-+.+|..
T Consensus       200 al~~l~~~~gi~~~~v~afGD~~-NDi~Ml~~ag~~  234 (270)
T PRK10513        200 GVKSLAEHLGIKPEEVMAIGDQE-NDIAMIEYAGVG  234 (270)
T ss_pred             HHHHHHHHhCCCHHHEEEECCch-hhHHHHHhCCce
Confidence            46889999999999999999998 899999999973

>PRK10976 putative hydrolase; Provisional

Probab=85.27  E-value=0.79  Score=43.16  Aligned_cols=35  Identities=23%  Similarity=0.217  Sum_probs=32.0

Q ss_pred             hHHHHHHHhCCCCCcEEEEccCCcccHHHHHHcCCe
Q 017982          262 TAEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGFL  297 (363)
Q Consensus       262 ~~~~alk~lgl~pee~vmVGDrL~TDI~~A~raGi~  297 (363)
                      +++.+++++|+++++++.|||.. .|+.+-..+|..
T Consensus       194 al~~l~~~lgi~~~~viafGD~~-NDi~Ml~~ag~~  228 (266)
T PRK10976        194 ALEAVAKKLGYSLKDCIAFGDGM-NDAEMLSMAGKG  228 (266)
T ss_pred             HHHHHHHHcCCCHHHeEEEcCCc-ccHHHHHHcCCC
Confidence            46889999999999999999998 899999999974

>KOG2470 consensus Similar to IMP-GMP specific 5'-nucleotidase [Nucleotide transport and metabolism]

Probab=84.64  E-value=1.7  Score=44.28  Aligned_cols=95  Identities=18%  Similarity=0.267  Sum_probs=59.1

Q ss_pred             chhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCc-----cHHHHHHHHHHhCCeEEEcccCCCc---------hh------
Q 017982          203 WGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDN-----DASKARKLEGKIGIKVIRHRVKKPA---------GT------  262 (363)
Q Consensus       203 ~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp-----~~~~a~~i~~~LGi~~I~~~~kKP~---------p~------  262 (363)
                      .|.+..+|++|+ ..|.+++++||++.++- |.     .|...+.+   +++  +...+.||.         ..      
T Consensus       242 ~~ql~~fl~kL~-~~GKklFLiTNSPysFV-d~GM~flvG~~WRdl---FDV--VIvqA~KP~Fftde~rPfR~~dek~~  314 (510)
T KOG2470|consen  242 NPQLLAFLRKLK-DHGKKLFLITNSPYSFV-DKGMRFLVGDDWRDL---FDV--VIVQANKPEFFTDERRPFRKYDEKRG  314 (510)
T ss_pred             cHHHHHHHHHHH-HhcCcEEEEeCCchhhh-hcCceeeeCccHHhh---hhe--eEEecCCCcccccccCcchhhccccc
Confidence            578889999998 58999999999985441 10     01111111   111  111112221         11      


Q ss_pred             --------------------HHHHHHHhCCCCCcEEEEccCCcccHHHHH-HcCCeEEEEcCC
Q 017982          263 --------------------AEEIEKHFGCQSSQLIMVGDRPFTDIVYGN-RNGFLTILTEPL  304 (363)
Q Consensus       263 --------------------~~~alk~lgl~pee~vmVGDrL~TDI~~A~-raGi~TIlV~p~  304 (363)
                                          +...++.-|-.-.+++++||.++.|+..-. +.|.+|-.+-|.
T Consensus       315 sl~wdkv~klekgkiYy~G~l~~flelt~WrG~~VlYFGDHlySDLad~tlkhgWRTgAII~E  377 (510)
T KOG2470|consen  315 SLLWDKVDKLEKGKIYYQGNLKSFLELTGWRGPRVLYFGDHLYSDLADLTLKHGWRTGAIIPE  377 (510)
T ss_pred             chhhhhhhhcccCceeeeccHHHHHHHhccCCCeeEEecCcchhhhhhhHhhcccccccchHH
Confidence                                233444456677899999999999998866 889888777543

>KOG4549 consensus Magnesium-dependent phosphatase [General function prediction only]

Probab=84.16  E-value=7.3  Score=34.51  Aligned_cols=43  Identities=12%  Similarity=0.113  Sum_probs=35.9

Q ss_pred             CcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCeE
Q 017982          201 TLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKV  251 (363)
Q Consensus       201 ~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~~  251 (363)
                      ..|+++...|..|+ +.|+.++++||...       -..+..+++.+.++.
T Consensus        44 ~fY~Di~rIL~dLk-~~GVtl~~ASRt~a-------p~iA~q~L~~fkvk~   86 (144)
T KOG4549|consen   44 IFYDDIRRILVDLK-KLGVTLIHASRTMA-------PQIASQGLETFKVKQ   86 (144)
T ss_pred             eeccchhHHHHHHH-hcCcEEEEecCCCC-------HHHHHHHHHHhccCc
Confidence            47899999999999 68999999999963       367778888888764

>KOG1618 consensus Predicted phosphatase [General function prediction only]

Probab=83.64  E-value=1.5  Score=44.14  Aligned_cols=87  Identities=23%  Similarity=0.268  Sum_probs=53.6

Q ss_pred             EEEEeCCCCCCCCC----c--cH---HHHHHHHHHh-CCeEEEcccCCCch-hHHHH---HH-----HhC-CCCCcEEEE
Q 017982          221 IAVFSNSAGLYEYD----N--DA---SKARKLEGKI-GIKVIRHRVKKPAG-TAEEI---EK-----HFG-CQSSQLIMV  280 (363)
Q Consensus       221 l~IVSN~~g~~~~d----p--~~---~~a~~i~~~L-Gi~~I~~~~kKP~p-~~~~a---lk-----~lg-l~pee~vmV  280 (363)
                      -+.+||.+-.+..+    .  .+   ..++.+-+.+ |-+.-+...+||.+ .++.|   +.     ..+ -++.++-||
T Consensus       224 piy~sN~DLlW~~e~~lpR~G~GaF~l~lesiy~kltGk~L~~~t~GKPt~ltY~~A~~vl~~~ak~~~~~~~~k~lymv  303 (389)
T KOG1618|consen  224 PIYASNMDLLWMAEYKLPRFGHGAFRLCLESIYQKLTGKPLRYTTLGKPTKLTYDYAEDVLRRQAKRRGGAAPIKKLYMV  303 (389)
T ss_pred             ceEEecccccccccCCCccccchHHHHHHHHHHHHhcCCcccccccCCCceehHHhHHHHHHHHHHhhcccCCcceeeee
Confidence            46778887655322    1  11   1223443443 33322235789998 34322   22     223 356788899


Q ss_pred             ccCCcccHHHHH---------------HcCCeEEEEcCCCCC
Q 017982          281 GDRPFTDIVYGN---------------RNGFLTILTEPLSLA  307 (363)
Q Consensus       281 GDrL~TDI~~A~---------------raGi~TIlV~p~~~~  307 (363)
                      ||...+||.+|+               .-|+.+|||..++-.
T Consensus       304 GDNP~sDv~GA~lf~~yap~~~~g~~~~~~w~SILV~TGV~~  345 (389)
T KOG1618|consen  304 GDNPMSDVRGANLFHQYAPELGAGGSANYGWISILVRTGVYN  345 (389)
T ss_pred             cCCCcccccccccccccccccccccccCCCceEEEEeeeeec
Confidence            999999999998               678899999876644

>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family

Probab=83.01  E-value=1.5  Score=41.33  Aligned_cols=37  Identities=14%  Similarity=0.338  Sum_probs=32.3

Q ss_pred             hHHHHHHHhCCC--CCcEEEEccCCcccHHHHHHcCCeEE
Q 017982          262 TAEEIEKHFGCQ--SSQLIMVGDRPFTDIVYGNRNGFLTI  299 (363)
Q Consensus       262 ~~~~alk~lgl~--pee~vmVGDrL~TDI~~A~raGi~TI  299 (363)
                      +++.+++.+|++  .+++++|||+. +|+.+.+.+|...+
T Consensus       180 ai~~l~~~~~i~~~~~~~~a~GD~~-ND~~Ml~~ag~~va  218 (256)
T TIGR01486       180 AANALKQFYNQPGGAIKVVGLGDSP-NDLPLLEVVDLAVV  218 (256)
T ss_pred             HHHHHHHHHhhcCCCceEEEEcCCH-hhHHHHHHCCEEEE
Confidence            367889999999  99999999999 89999999996433

This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta

>PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria []

Probab=81.52  E-value=5.5  Score=37.87  Aligned_cols=54  Identities=15%  Similarity=0.270  Sum_probs=37.1

Q ss_pred             CeEEEcccCCCchhHHHHHHHhCCCCCcEEEEccCCcccHHHHHHcCCeEEEEcCCC
Q 017982          249 IKVIRHRVKKPAGTAEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGFLTILTEPLS  305 (363)
Q Consensus       249 i~~I~~~~kKP~p~~~~alk~lgl~pee~vmVGDrL~TDI~~A~raGi~TIlV~p~~  305 (363)
                      ++++...+.|-. ++..+++++++++++++.+||+. +|+.+- ..+..+|.|....
T Consensus       157 ldilP~~a~K~~-Al~~L~~~~~~~~~~vl~aGDSg-ND~~mL-~~~~~~vvV~Na~  210 (247)
T PF05116_consen  157 LDILPKGASKGA-ALRYLMERWGIPPEQVLVAGDSG-NDLEML-EGGDHGVVVGNAQ  210 (247)
T ss_dssp             EEEEETT-SHHH-HHHHHHHHHT--GGGEEEEESSG-GGHHHH-CCSSEEEE-TTS-
T ss_pred             EEEccCCCCHHH-HHHHHHHHhCCCHHHEEEEeCCC-CcHHHH-cCcCCEEEEcCCC
Confidence            344433444433 46788999999999999999998 799876 7788999887543

SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B ....

>TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit

Probab=81.26  E-value=7  Score=44.73  Aligned_cols=41  Identities=12%  Similarity=0.323  Sum_probs=31.6

Q ss_pred             CCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCC
Q 017982          200 LTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGI  249 (363)
Q Consensus       200 ~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi  249 (363)
                      ..+.|++.+++++|+ +.|+++.++|...        ...+..+.+.+|+
T Consensus       567 Dplr~~v~~aI~~l~-~~Gi~v~~~TGd~--------~~ta~~ia~~~gi  607 (997)
T TIGR01106       567 DPPRAAVPDAVGKCR-SAGIKVIMVTGDH--------PITAKAIAKGVGI  607 (997)
T ss_pred             CCChHHHHHHHHHHH-HCCCeEEEECCCC--------HHHHHHHHHHcCC
Confidence            356889999999998 6899999999775        2445566666655

Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps.

>PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3

Probab=81.10  E-value=2  Score=40.09  Aligned_cols=42  Identities=17%  Similarity=0.118  Sum_probs=25.7

Q ss_pred             EEcCCceeecCCC----CCcchhHHHHHHHHHHhCCCeEEEEeCCC
Q 017982          187 VFDKDNTLTAPYS----LTLWGPLSSSIEQCKSVFGHDIAVFSNSA  228 (363)
Q Consensus       187 V~DlDnTL~~~~~----~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~  228 (363)
                      ++|.|+||.....    ..+.+++.+.|++|.+..+..++|+|..+
T Consensus         1 ~lDyDGTL~p~~~~p~~~~~~~~~~~~L~~La~~~~~~v~IvSGR~   46 (235)
T PF02358_consen    1 FLDYDGTLAPIVDDPDAAVPPPELRELLRALAADPNNTVAIVSGRS   46 (235)
T ss_dssp             EEE-TTTSS---S-GGG----HHHHHHHHHHHHHSE--EEEE-SS-
T ss_pred             CcccCCccCCCCCCccccCCCHHHHHHHHHHhccCCCEEEEEEeCC
Confidence            5899999986332    35678999999999865544699999885

1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	363
3pdw_A	266	Uncharacterized hydrolase YUTF; structural genomic	4e-08
3qgm_A	268	P-nitrophenyl phosphatase (PHO2); structural genom	4e-08
1yv9_A	264	Hydrolase, haloacid dehalogenase family; hypotheti	5e-08
3epr_A	264	Hydrolase, haloacid dehalogenase-like family; stru	5e-08
2oyc_A	306	PLP phosphatase, pyridoxal phosphate phosphatase;	5e-08
1vjr_A	271	4-nitrophenylphosphatase; TM1742, structural genom	6e-08
2c4n_A	250	Protein NAGD; nucleotide phosphatase, HAD superfam	6e-08
2x4d_A	271	HLHPP, phospholysine phosphohistidine inorganic py	2e-07
2hx1_A	284	Predicted sugar phosphatases of the HAD superfamil	3e-07
2ho4_A	259	Haloacid dehalogenase-like hydrolase domain contai	1e-06
1zjj_A	263	Hypothetical protein PH1952; alpha/beta hydrolase	6e-06
3kc2_A	352	Uncharacterized protein YKR070W; HAD-like, mitocho	3e-04
2hoq_A	241	Putative HAD-hydrolase PH1655; haloacid dehalogena	5e-04

>3pdw_A Uncharacterized hydrolase YUTF; structural genomics, PSI2, NYSGXRC, protein structure initia YORK SGX research center for structural genomics; 1.60A {Bacillus subtilis} Length = 266

 Score = 52.9 bits (128), Expect = 4e-08
 Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 1/44 (2%)

Query: 258 KP-AGTAEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGFLTIL 300
           KP +   E+  +  G   S+ +MVGD   TDI+ G   G  T+L
Sbjct: 183 KPESIIMEQAMRVLGTDVSETLMVGDNYATDIMAGINAGMDTLL 226

>3qgm_A P-nitrophenyl phosphatase (PHO2); structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.00A {Archaeoglobus fulgidus} Length = 268

 Score = 52.5 bits (127), Expect = 4e-08
 Identities = 12/44 (27%), Positives = 18/44 (40%), Gaps = 1/44 (2%)

Query: 258 KP-AGTAEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGFLTIL 300
           KP      E     G  +  + +VGD+   D+  G   G  T+L
Sbjct: 187 KPSEVIMREALDILGLDAKDVAVVGDQIDVDVAAGKAIGAETVL 230

>1yv9_A Hydrolase, haloacid dehalogenase family; hypothetical protein, struc genomics, PSI, protein structure initiative; 2.80A {Enterococcus faecalis} SCOP: c.108.1.14 Length = 264

 Score = 52.5 bits (127), Expect = 5e-08
 Identities = 19/44 (43%), Positives = 24/44 (54%), Gaps = 1/44 (2%)

Query: 258 KP-AGTAEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGFLTIL 300
           KP A   E    H G +  Q+IMVGD   TDI  G +NG  ++L
Sbjct: 183 KPKAIIMERAIAHLGVEKEQVIMVGDNYETDIQSGIQNGIDSLL 226

>3epr_A Hydrolase, haloacid dehalogenase-like family; structural genomics, unknown function, HAD superfamily hydro PSI-2; 1.55A {Streptococcus agalactiae serogroup V} PDB: 1ys9_A 1wvi_A 1ydf_A Length = 264

 Score = 52.5 bits (127), Expect = 5e-08
 Identities = 15/44 (34%), Positives = 21/44 (47%), Gaps = 1/44 (2%)

Query: 258 KP-AGTAEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGFLTIL 300
           KP A    +  +      +Q +MVGD   TDI+ G  N   T+L
Sbjct: 182 KPNAIIMNKALEILNIPRNQAVMVGDNYLTDIMAGINNDIDTLL 225

>2oyc_A PLP phosphatase, pyridoxal phosphate phosphatase; structural genomics, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI-2; 1.72A {Homo sapiens} PDB: 2p27_A 2p69_A* 2cft_A* 2cfs_A 2cfr_A* Length = 306

 Score = 52.7 bits (127), Expect = 5e-08
 Identities = 19/45 (42%), Positives = 28/45 (62%), Gaps = 1/45 (2%)

Query: 258 KP-AGTAEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGFLTILT 301
           KP     E I ++F    ++ +MVGDR  TDI++G+R G  T+LT
Sbjct: 215 KPSPYMFECITENFSIDPARTLMVGDRLETDILFGHRCGMTTVLT 259

>1vjr_A 4-nitrophenylphosphatase; TM1742, structural genomics, JCSG, protein structure initiative, joint center for structural G hydrolase; 2.40A {Thermotoga maritima} SCOP: c.108.1.14 PDB: 1pw5_A* Length = 271

 Score = 52.5 bits (127), Expect = 6e-08
 Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 1/44 (2%)

Query: 258 KP-AGTAEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGFLTIL 300
           KP     + I + FG    ++ MVGDR +TD+  G   G ++IL
Sbjct: 195 KPNPLVVDVISEKFGVPKERMAMVGDRLYTDVKLGKNAGIVSIL 238

>2c4n_A Protein NAGD; nucleotide phosphatase, HAD superfamily, UMP phosphatase, carbohydrate metabolism, hydrolase; 1.8A {Escherichia coli} SCOP: c.108.1.14 Length = 250

 Score = 52.1 bits (126), Expect = 6e-08
 Identities = 14/44 (31%), Positives = 19/44 (43%), Gaps = 1/44 (2%)

Query: 258 KP-AGTAEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGFLTIL 300
           KP               S + ++VGD   TDI+ G + G  TIL
Sbjct: 176 KPSPWIIRAALNKMQAHSEETVIVGDNLRTDILAGFQAGLETIL 219

>2x4d_A HLHPP, phospholysine phosphohistidine inorganic pyrophos phosphatase; hydrolase; 1.92A {Homo sapiens} Length = 271

 Score = 51.0 bits (123), Expect = 2e-07
 Identities = 10/44 (22%), Positives = 18/44 (40%), Gaps = 1/44 (2%)

Query: 258 KP-AGTAEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGFLTIL 300
           KP     +   +  G ++ Q +M+GD    D+    R G   + 
Sbjct: 190 KPSPEFFKSALQAIGVEAHQAVMIGDDIVGDVGGAQRCGMRALQ 233

>2hx1_A Predicted sugar phosphatases of the HAD superfamily; ZP_00311070.1, possible sugar phosphatase, structural genomics; HET: MSE EPE; 2.10A {Cytophaga hutchinsonii} Length = 284

 Score = 50.3 bits (121), Expect = 3e-07
 Identities = 14/48 (29%), Positives = 22/48 (45%), Gaps = 5/48 (10%)

Query: 258 KPA-----GTAEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGFLTIL 300
           KP         + + +       +++MVGD   TDI+ GN+ G  T L
Sbjct: 204 KPDSQMFMFAYDMLRQKMEISKREILMVGDTLHTDILGGNKFGLDTAL 251

>2ho4_A Haloacid dehalogenase-like hydrolase domain containing 2; HDHD2, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; 2.20A {Mus musculus} PDB: 3hlt_A Length = 259

 Score = 48.3 bits (116), Expect = 1e-06
 Identities = 12/44 (27%), Positives = 17/44 (38%), Gaps = 1/44 (2%)

Query: 258 KP-AGTAEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGFLTIL 300
           KP      E  +   C   + +M+GD    D+      G L IL
Sbjct: 179 KPEKTFFLEALRDADCAPEEAVMIGDDCRDDVDGAQNIGMLGIL 222

>1zjj_A Hypothetical protein PH1952; alpha/beta hydrolase fold, HAD superfamily, structural genom riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii} Length = 263

 Score = 46.0 bits (110), Expect = 6e-06
 Identities = 15/45 (33%), Positives = 21/45 (46%), Gaps = 3/45 (6%)

Query: 258 KP-AGTAEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGFLTILT 301
           KP     E + + F     +L MVGDR  TDI +  + G   I+ 
Sbjct: 187 KPNEPMYEVVREMFP--GEELWMVGDRLDTDIAFAKKFGMKAIMV 229

>3kc2_A Uncharacterized protein YKR070W; HAD-like, mitochondral protein, PSI, MCSG, structural genomi protein structure initiative; HET: MSE; 1.55A {Saccharomyces cerevisiae} PDB: 3rf6_A* Length = 352

 Score = 41.7 bits (97), Expect = 3e-04
 Identities = 10/62 (16%), Positives = 20/62 (32%), Gaps = 1/62 (1%)

Query: 240 ARKLEGKIGIKVIRHRVKKPAGTAEEIEKHFGCQS-SQLIMVGDRPFTDIVYGNRNGFLT 298
           A  +      ++     +        +           + MVGD P +DI+     G+ +
Sbjct: 255 AHHVLIDWEKRLSGKIGQSVKQKLPLLGTKPSTSPFHAVFMVGDNPASDIIGAQNYGWNS 314

Query: 299 IL 300
            L
Sbjct: 315 CL 316

>2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii} Length = 241

 Score = 40.1 bits (94), Expect = 5e-04
 Identities = 16/86 (18%), Positives = 34/86 (39%), Gaps = 11/86 (12%)

Query: 264 EEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGFLTIL-------TEPLSLAEEP-FIVRQ 315
           ++  K F  +  + +MVGDR ++DI    R G  T+           L   +   + +  
Sbjct: 157 KKALKAFNVKPEEALMVGDRLYSDIYGAKRVGMKTVWFRYGKHSERELEYRKYADYEIDN 216

Query: 316 VRKLEVTIVNRWF--RRGLKPISHNL 339
           +  L + ++ R     + + P    +
Sbjct: 217 LESL-LEVLARESSSNKKVHPPRQQI 241

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	363
3ib6_A	189	Uncharacterized protein; structural genomics, unkn	99.75
3l8h_A	179	Putative haloacid dehalogenase-like hydrolase; HAD	99.74
2pr7_A	137	Haloacid dehalogenase/epoxide hydrolase family; NP	99.72
2oda_A	196	Hypothetical protein pspto_2114; haloacid dehaloge	99.68
2fpr_A	176	Histidine biosynthesis bifunctional protein HISB;	99.66
2gmw_A	211	D,D-heptose 1,7-bisphosphate phosphatase; Zn-bindi	99.66
2o2x_A	218	Hypothetical protein; structural genomics, joint c	99.66
3kbb_A	216	Phosphorylated carbohydrates phosphatase TM_1254;	99.65
2wm8_A	187	MDP-1, magnesium-dependent phosphatase 1; haloacid	99.63
4g9b_A	243	Beta-PGM, beta-phosphoglucomutase; HAD, putative p	99.6
3m9l_A	205	Hydrolase, haloacid dehalogenase-like family; HAD	99.55
4gib_A	250	Beta-phosphoglucomutase; rossmann fold, HAD-like,	99.55
3um9_A	230	Haloacid dehalogenase, type II; haloacid dehalogen	99.53
2p9j_A	162	Hypothetical protein AQ2171; secsg, riken, PSI, st	99.53
3ij5_A	211	3-deoxy-D-manno-octulosonate 8-phosphate phosphat;	99.53
3umb_A	233	Dehalogenase-like hydrolase; 2.20A {Ralstonia sola	99.53
2no4_A	240	(S)-2-haloacid dehalogenase IVA; HAD superfamily,	99.51
2pib_A	216	Phosphorylated carbohydrates phosphatase TM_1254;	99.51
3kzx_A	231	HAD-superfamily hydrolase, subfamily IA, variant;	99.51
1zrn_A	232	L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseud	99.5
3nvb_A	387	Uncharacterized protein; protein FKBH, protein fkb	99.48
3k1z_A	263	Haloacid dehalogenase-like hydrolase domain-conta	99.48
3e8m_A	164	Acylneuraminate cytidylyltransferase; 2-keto-3-deo	99.48
4ex6_A	237	ALNB; modified rossman fold, phosphatase, magnesiu	99.48
3u26_A	234	PF00702 domain protein; structural genomics, PSI-b	99.47
3zvl_A	416	Bifunctional polynucleotide phosphatase/kinase; hy	99.47
3ed5_A	238	YFNB; APC60080, bacillus subtilis subsp. subtilis	99.47
3iru_A	277	Phoshonoacetaldehyde hydrolase like protein; phosp	99.47
3qnm_A	240	Haloacid dehalogenase-like hydrolase; structural g	99.47
4dcc_A	229	Putative haloacid dehalogenase-like hydrolase; mag	99.46
3ddh_A	234	Putative haloacid dehalogenase-like family hydrol;	99.46
3n1u_A	191	Hydrolase, HAD superfamily, subfamily III A; struc	99.46
2r8e_A	188	3-deoxy-D-manno-octulosonate 8-phosphate phosphata	99.45
3s6j_A	233	Hydrolase, haloacid dehalogenase-like family; stru	99.45
3vay_A	230	HAD-superfamily hydrolase; rossmann fold, haloacid	99.45
3n07_A	195	3-deoxy-D-manno-octulosonate 8-phosphate phosphat;	99.45
1k1e_A	180	Deoxy-D-mannose-octulosonate 8-phosphate phosphat;	99.43
2w43_A	201	Hypothetical 2-haloalkanoic acid dehalogenase; hyd	99.43
1qq5_A	253	Protein (L-2-haloacid dehalogenase); hydrolase; 1.	99.43
4eek_A	259	Beta-phosphoglucomutase-related protein; hydrolase	99.43
3i28_A	555	Epoxide hydrolase 2; aromatic hydrocarbons catabol	99.43
2b82_A	211	APHA, class B acid phosphatase; DDDD acid phosphat	99.42
2ho4_A	259	Haloacid dehalogenase-like hydrolase domain contai	99.41
2b0c_A	206	Putative phosphatase; alpha-D-glucose-1-phosphate,	99.4
3sd7_A	240	Putative phosphatase; structural genomics, haloaci	99.4
3epr_A	264	Hydrolase, haloacid dehalogenase-like family; stru	99.4
3umg_A	254	Haloacid dehalogenase; defluorinase, hydrolase; 2.	99.39
1vjr_A	271	4-nitrophenylphosphatase; TM1742, structural genom	99.38
3nuq_A	282	Protein SSM1, putative nucleotide phosphatase; sup	99.38
3m1y_A	217	Phosphoserine phosphatase (SERB); NYSGXRC, PSI II,	99.38
3mmz_A	176	Putative HAD family hydrolase; structural genomics	99.36
3umc_A	254	Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeru	99.36
3qgm_A	268	P-nitrophenyl phosphatase (PHO2); structural genom	99.35
3l5k_A	250	Protein GS1, haloacid dehalogenase-like hydrolase	99.34
2ah5_A	210	COG0546: predicted phosphatases; MCSG, structural	99.34
3mn1_A	189	Probable YRBI family phosphatase; structural genom	99.34
1yns_A	261	E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo	99.33
4eze_A	317	Haloacid dehalogenase-like hydrolase; magnesium bi	99.32
2hi0_A	240	Putative phosphoglycolate phosphatase; YP_619066.1	99.31
3pdw_A	266	Uncharacterized hydrolase YUTF; structural genomic	99.31
1zjj_A	263	Hypothetical protein PH1952; alpha/beta hydrolase	99.3
1yv9_A	264	Hydrolase, haloacid dehalogenase family; hypotheti	99.3
3e58_A	214	Putative beta-phosphoglucomutase; structu genomics	99.3
2gfh_A	260	Haloacid dehalogenase-like hydrolase domain conta;	99.29
2hoq_A	241	Putative HAD-hydrolase PH1655; haloacid dehalogena	99.27
2nyv_A	222	Pgpase, PGP, phosphoglycolate phosphatase; structu	99.27
3ewi_A	168	N-acylneuraminate cytidylyltransferase; beta barre	99.26
3mc1_A	226	Predicted phosphatase, HAD family; PSI2, NYSGXRC,	99.23
3cnh_A	200	Hydrolase family protein; NP_295428.1, predicted h	99.23
2x4d_A	271	HLHPP, phospholysine phosphohistidine inorganic py	99.21
3p96_A	415	Phosphoserine phosphatase SERB; ssgcid, structural	99.21
3smv_A	240	S-(-)-azetidine-2-carboxylate hydrolase; haloacid	99.2
3nas_A	233	Beta-PGM, beta-phosphoglucomutase; PSI, structural	99.2
3dv9_A	247	Beta-phosphoglucomutase; structural genomics, APC6	99.2
3kd3_A	219	Phosphoserine phosphohydrolase-like protein; csgid	99.2
2om6_A	235	Probable phosphoserine phosphatase; rossmann fold,	99.19
2hx1_A	284	Predicted sugar phosphatases of the HAD superfamil	99.19
1rku_A	206	Homoserine kinase; phosphoserine phosphatase, phos	99.18
2i6x_A	211	Hydrolase, haloacid dehalogenase-like family; HAD	99.18
2hsz_A	243	Novel predicted phosphatase; structural genomics,	99.18
2g80_A	253	Protein UTR4; YEL038W, UTR4 protein (unknown trans	99.17
3qxg_A	243	Inorganic pyrophosphatase; hydrolase, magnesium bi	99.17
2c4n_A	250	Protein NAGD; nucleotide phosphatase, HAD superfam	99.16
3fvv_A	232	Uncharacterized protein; unknown function, structu	99.16
1ltq_A	301	Polynucleotide kinase; phosphatase, alpha/beta, P-	99.16
1qyi_A	384	ZR25, hypothetical protein; structural genomics, P	99.14
2zg6_A	220	Putative uncharacterized protein ST2620, probable	99.14
2jc9_A	555	Cytosolic purine 5'-nucleotidase; cytosolic 5-prim	99.13
2hdo_A	209	Phosphoglycolate phosphatase; NP_784602.1, structu	99.12
2pke_A	251	Haloacid delahogenase-like family hydrolase; NP_63	99.1
2oyc_A	306	PLP phosphatase, pyridoxal phosphate phosphatase;	99.09
3kc2_A	352	Uncharacterized protein YKR070W; HAD-like, mitocho	99.09
2hcf_A	234	Hydrolase, haloacid dehalogenase-like family; NP_6	99.07
1te2_A	226	Putative phosphatase; structural genomics, phospha	99.06
2go7_A	207	Hydrolase, haloacid dehalogenase-like family; stru	99.03
2i7d_A	193	5'(3')-deoxyribonucleotidase, cytosolic type; hydr	99.01
2wf7_A	221	Beta-PGM, beta-phosphoglucomutase; transition stat	99.01
2fi1_A	190	Hydrolase, haloacid dehalogenase-like family; stru	99.01
3d6j_A	225	Putative haloacid dehalogenase-like hydrolase; str	98.98
3a1c_A	287	Probable copper-exporting P-type ATPase A; ATP-bin	98.98
1swv_A	267	Phosphonoacetaldehyde hydrolase; HAD enzyme superf	98.95
2qlt_A	275	(DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, sac	98.92
2p11_A	231	Hypothetical protein; putative haloacid dehalogena	98.91
2i33_A	258	Acid phosphatase; HAD superfamily, hydrolase; 1.57	98.91
2fea_A	236	2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate	98.88
1nnl_A	225	L-3-phosphoserine phosphatase; PSP, HPSP, phospho-	98.87
2fdr_A	229	Conserved hypothetical protein; SAD, structural ge	98.84
3n28_A	335	Phosphoserine phosphatase; HAD family hydrolase, s	98.79
2hhl_A	195	CTD small phosphatase-like protein; CTD phosphatas	98.75
3skx_A	280	Copper-exporting P-type ATPase B; P1B-ATPase, ATP	98.72
1wr8_A	231	Phosphoglycolate phosphatase; alpha / beta core do	98.7
1l6r_A	227	Hypothetical protein TA0175; structural genomics,	98.66
2ght_A	181	Carboxy-terminal domain RNA polymerase II polypept	98.65
1l7m_A	211	Phosphoserine phosphatase; rossmann fold, four-hel	98.64
4dw8_A	279	Haloacid dehalogenase-like hydrolase; HAD, putativ	98.52
3dnp_A	290	Stress response protein YHAX; structural PSI-2, pr	98.46
1q92_A	197	5(3)-deoxyribonucleotidase; alpha-beta rossman fol	98.46
3fzq_A	274	Putative hydrolase; YP_001086940.1, putative haloa	98.46
3mpo_A	279	Predicted hydrolase of the HAD superfamily; SGX, P	98.39
3pct_A	260	Class C acid phosphatase; hydrolase, outer membran	98.39
2yj3_A	263	Copper-transporting ATPase; hydrolase, P-type ATPa	97.72
4ap9_A	201	Phosphoserine phosphatase; hydrolase, haloacid deh	98.37
3r4c_A	268	Hydrolase, haloacid dehalogenase-like hydrolase; h	98.34
3ocu_A	262	Lipoprotein E; hydrolase, outer membrane; HET: NMN	98.31
3pgv_A	285	Haloacid dehalogenase-like hydrolase; structural g	98.31
3dao_A	283	Putative phosphatse; structural genomics, joint ce	98.22
3l7y_A	304	Putative uncharacterized protein SMU.1108C; hydrol	98.19
2pq0_A	258	Hypothetical conserved protein GK1056; hyopthetica	98.05
2rbk_A	261	Putative uncharacterized protein; HAD-like phospha	98.0
3gyg_A	289	NTD biosynthesis operon putative hydrolase NTDB; P	97.95
3zx4_A	259	MPGP, mannosyl-3-phosphoglycerate phosphatase; hyd	97.91
3j08_A	645	COPA, copper-exporting P-type ATPase A; copper tra	97.76
4g63_A	470	Cytosolic IMP-GMP specific 5'-nucleotidase; struct	97.65
3kc2_A	352	Uncharacterized protein YKR070W; HAD-like, mitocho	97.58
3j09_A	723	COPA, copper-exporting P-type ATPase A; copper tra	97.56
2obb_A	142	Hypothetical protein; structural genomics, PSI-2,	97.52
3rfu_A	736	Copper efflux ATPase; alpha helical, CPC, CXXC, AT	97.36
1zjj_A	263	Hypothetical protein PH1952; alpha/beta hydrolase	97.21
1xpj_A	126	Hypothetical protein; structural genomics, MCSG, p	97.16
2hx1_A	284	Predicted sugar phosphatases of the HAD superfamil	97.04
2oyc_A	306	PLP phosphatase, pyridoxal phosphate phosphatase;	96.94
3qle_A	204	TIM50P; chaperone, mitochondrion, preprotein trans	96.85
3bwv_A	180	Putative 5'(3')-deoxyribonucleotidase; NP_764060.1	96.73
1xvi_A	275	MPGP, YEDP, putative mannosyl-3-phosphoglycerate p	96.64
1rkq_A	282	Hypothetical protein YIDA; two domain structure wi	96.57
1nrw_A	288	Hypothetical protein, haloacid dehalogenase-like h	96.52
2zos_A	249	MPGP, mannosyl-3-phosphoglycerate phosphatase; hal	96.47
1rlm_A	271	Phosphatase; HAD family, rossman fold, hydrolase;	96.44
1nf2_A	268	Phosphatase; structural proteomics, HAD NEW fold,	96.37
1yv9_A	264	Hydrolase, haloacid dehalogenase family; hypotheti	96.37
2b30_A	301	Pvivax hypothetical protein; SGPP, structural geno	96.27
3f9r_A	246	Phosphomannomutase; trypanosome glycobiology struc	95.84
1u02_A	239	Trehalose-6-phosphate phosphatase related protein;	95.8
3ar4_A	995	Sarcoplasmic/endoplasmic reticulum calcium ATPase;	95.52
1rlm_A	271	Phosphatase; HAD family, rossman fold, hydrolase;	95.48
4fe3_A	297	Cytosolic 5'-nucleotidase 3; substrate complex, HA	95.45
1mhs_A	920	Proton pump, plasma membrane ATPase; ION transport	95.44
1nrw_A	288	Hypothetical protein, haloacid dehalogenase-like h	95.38
3ef0_A	372	RNA polymerase II subunit A C-terminal domain phos	95.35
2zxe_A	1028	Na, K-ATPase alpha subunit; membrane protein, ION	95.18
2amy_A	246	PMM 2, phosphomannomutase 2; HS.459855, HS.313504,	95.12
3shq_A	320	UBLCP1; phosphatase, hydrolase; 1.96A {Drosophila	95.04
1rkq_A	282	Hypothetical protein YIDA; two domain structure wi	94.69
1nf2_A	268	Phosphatase; structural proteomics, HAD NEW fold,	94.65
2b30_A	301	Pvivax hypothetical protein; SGPP, structural geno	94.3
2fue_A	262	PMM 1, PMMH-22, phosphomannomutase 1; enzyme-produ	94.14
1s2o_A	244	SPP, sucrose-phosphatase; phosphohydrolase, HAD su	93.92
3gyg_A	289	NTD biosynthesis operon putative hydrolase NTDB; P	93.49
3b8c_A	885	ATPase 2, plasma membrane-type; P-type ATPase, pro	93.48
4gxt_A	385	A conserved functionally unknown protein; structur	92.81
1y8a_A	332	Hypothetical protein AF1437; structural genomics,	92.39
3ixz_A	1034	Potassium-transporting ATPase alpha; ION pump, H+,	90.68
2zos_A	249	MPGP, mannosyl-3-phosphoglycerate phosphatase; hal	89.95
1s2o_A	244	SPP, sucrose-phosphatase; phosphohydrolase, HAD su	89.43
1xvi_A	275	MPGP, YEDP, putative mannosyl-3-phosphoglycerate p	89.18
2q5c_A	196	NTRC family transcriptional regulator; structural	87.0
3to5_A	134	CHEY homolog; alpha(5)beta(5), chemotaxis, FLIM, p	86.22

>3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes}

Probab=99.75  E-value=1.7e-17  Score=146.70  Aligned_cols=118  Identities=23%  Similarity=0.331  Sum_probs=97.4

Q ss_pred             CCCEEEEcCCceeec-------------CCCCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhC
Q 017982          182 GFKGVVFDKDNTLTA-------------PYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIG  248 (363)
Q Consensus       182 GIkaVV~DlDnTL~~-------------~~~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LG  248 (363)
                      ++++|+||+|+||+.             +....++|++.++|+.|+ +.|++++|+||+...     ....+..+++.+|
T Consensus         2 ~ik~vifD~DgtL~~~~~~~y~~~~~~~~~~~~~~~g~~~~L~~L~-~~g~~~~i~Tn~~~~-----~~~~~~~~l~~~g   75 (189)
T 3ib6_A            2 SLTHVIWDMGETLNTVPNTRYDHHPLDTYPEVVLRKNAKETLEKVK-QLGFKQAILSNTATS-----DTEVIKRVLTNFG   75 (189)
T ss_dssp             -CCEEEECTBTTTBCCCTTSSCSSCGGGCTTCCBCTTHHHHHHHHH-HTTCEEEEEECCSSC-----CHHHHHHHHHHTT
T ss_pred             CceEEEEcCCCceeeccchhhhhHHHhccCCceeCcCHHHHHHHHH-HCCCEEEEEECCCcc-----chHHHHHHHHhcC
Confidence            689999999999954             233568999999999998 579999999999631     1256788889999


Q ss_pred             Ce----EEE-c-------ccCCCch-hHHHHHHHhCCCCCcEEEEccCCcccHHHHHHcCCeEEEEcCCC
Q 017982          249 IK----VIR-H-------RVKKPAG-TAEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGFLTILTEPLS  305 (363)
Q Consensus       249 i~----~I~-~-------~~kKP~p-~~~~alk~lgl~pee~vmVGDrL~TDI~~A~raGi~TIlV~p~~  305 (363)
                      +.    .+. .       ...||++ .+..+++++|++|++++||||++.+||.+|+++|+.+|+|....
T Consensus        76 l~~~fd~i~~~~~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~l~VGD~~~~Di~~A~~aG~~~i~v~~~~  145 (189)
T 3ib6_A           76 IIDYFDFIYASNSELQPGKMEKPDKTIFDFTLNALQIDKTEAVMVGNTFESDIIGANRAGIHAIWLQNPE  145 (189)
T ss_dssp             CGGGEEEEEECCTTSSTTCCCTTSHHHHHHHHHHHTCCGGGEEEEESBTTTTHHHHHHTTCEEEEECCTT
T ss_pred             chhheEEEEEccccccccCCCCcCHHHHHHHHHHcCCCcccEEEECCCcHHHHHHHHHCCCeEEEECCcc
Confidence            85    232 1       4569998 57999999999999999999996689999999999999998554

>3l8h_A Putative haloacid dehalogenase-like hydrolase; HAD superfamily, GMHB, D-glycero-D-manno-heptose-1, 7-bispho phosphatase; HET: FX1; 1.68A {Bordetella bronchiseptica}

Probab=99.74  E-value=9.7e-18  Score=145.35  Aligned_cols=121  Identities=17%  Similarity=0.271  Sum_probs=96.7

Q ss_pred             CCEEEEcCCceeecCC--------CCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCC--CCcc-----HHHHHHHHHHh
Q 017982          183 FKGVVFDKDNTLTAPY--------SLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYE--YDND-----ASKARKLEGKI  247 (363)
Q Consensus       183 IkaVV~DlDnTL~~~~--------~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~--~dp~-----~~~a~~i~~~L  247 (363)
                      +|+++||+|+||+...        ...++|++.++|++|+ +.|++++|+||++....  +...     ...+..+++.+
T Consensus         1 ~k~v~~D~DGtL~~~~~~~~~~~~~~~~~~g~~~~l~~L~-~~g~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~   79 (179)
T 3l8h_A            1 MKLIILDRDGVVNQDSDAFVKSPDEWIALPGSLQAIARLT-QADWTVVLATNQSGLARGLFDTATLNAIHDKMHRALAQM   79 (179)
T ss_dssp             CCEEEECSBTTTBCCCTTCCCSGGGCCBCTTHHHHHHHHH-HTTCEEEEEEECTTTTTTSSCHHHHHHHHHHHHHHHHHT
T ss_pred             CCEEEEcCCCccccCCCccCCCHHHceECcCHHHHHHHHH-HCCCEEEEEECCCccccCcCCHHHHHHHHHHHHHHHHhC
Confidence            5899999999998532        3468999999999998 57999999999974211  0000     13456777788


Q ss_pred             C--CeEEE---------cccCCCch-hHHHHHHHhCCCCCcEEEEccCCcccHHHHHHcCCeEEEEcCCC
Q 017982          248 G--IKVIR---------HRVKKPAG-TAEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGFLTILTEPLS  305 (363)
Q Consensus       248 G--i~~I~---------~~~kKP~p-~~~~alk~lgl~pee~vmVGDrL~TDI~~A~raGi~TIlV~p~~  305 (363)
                      |  ++.++         ....||.+ .++.+++++|++|++++||||+. +||.+|+++|+.+|+|..+.
T Consensus        80 g~~~~~~~~~~~~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~~~vGD~~-~Di~~a~~aG~~~i~v~~g~  148 (179)
T 3l8h_A           80 GGVVDAIFMCPHGPDDGCACRKPLPGMYRDIARRYDVDLAGVPAVGDSL-RDLQAAAQAGCAPWLVQTGN  148 (179)
T ss_dssp             TCCCCEEEEECCCTTSCCSSSTTSSHHHHHHHHHHTCCCTTCEEEESSH-HHHHHHHHHTCEEEEESTTT
T ss_pred             CCceeEEEEcCCCCCCCCCCCCCCHHHHHHHHHHcCCCHHHEEEECCCH-HHHHHHHHCCCcEEEECCCC
Confidence            8  66443         13579998 57999999999999999999999 99999999999999998765

>2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032}

Probab=99.72  E-value=9.2e-18  Score=137.66  Aligned_cols=111  Identities=14%  Similarity=0.180  Sum_probs=91.0

Q ss_pred             CCCEEEEcCCceeecCCCCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCe----EEE----
Q 017982          182 GFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK----VIR----  253 (363)
Q Consensus       182 GIkaVV~DlDnTL~~~~~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~----~I~----  253 (363)
                      |++++++|+|+||  +....++|++.++|++|+ +.|++++|+||+..        ..++.+++.+|+.    .+.    
T Consensus         1 ~~k~i~~D~DgtL--~~~~~~~~~~~~~l~~L~-~~G~~~~i~S~~~~--------~~~~~~l~~~~l~~~f~~i~~~~~   69 (137)
T 2pr7_A            1 GMRGLIVDYAGVL--DGTDEDQRRWRNLLAAAK-KNGVGTVILSNDPG--------GLGAAPIRELETNGVVDKVLLSGE   69 (137)
T ss_dssp             CCCEEEECSTTTT--SSCHHHHHHHHHHHHHHH-HTTCEEEEEECSCC--------GGGGHHHHHHHHTTSSSEEEEHHH
T ss_pred             CCcEEEEecccee--cCCCccCccHHHHHHHHH-HCCCEEEEEeCCCH--------HHHHHHHHHCChHhhccEEEEecc
Confidence            6899999999999  456678999999999998 57999999999963        2234445555542    332    


Q ss_pred             cccCCCch-hHHHHHHHhCCCCCcEEEEccCCcccHHHHHHcCCeEEEEcCC
Q 017982          254 HRVKKPAG-TAEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGFLTILTEPL  304 (363)
Q Consensus       254 ~~~kKP~p-~~~~alk~lgl~pee~vmVGDrL~TDI~~A~raGi~TIlV~p~  304 (363)
                      ....||.+ .+..+++++|++|++++||||+. +||.+|+++|+.+|+|...
T Consensus        70 ~~~~Kp~~~~~~~~~~~~~~~~~~~~~vgD~~-~di~~a~~~G~~~i~~~~~  120 (137)
T 2pr7_A           70 LGVEKPEEAAFQAAADAIDLPMRDCVLVDDSI-LNVRGAVEAGLVGVYYQQF  120 (137)
T ss_dssp             HSCCTTSHHHHHHHHHHTTCCGGGEEEEESCH-HHHHHHHHHTCEEEECSCH
T ss_pred             CCCCCCCHHHHHHHHHHcCCCcccEEEEcCCH-HHHHHHHHCCCEEEEeCCh
Confidence            24689998 57899999999999999999999 7999999999999999754

>2oda_A Hypothetical protein pspto_2114; haloacid dehalogenase, phosphonoacetaldehyde hydrolase, protein binding; HET: EPE; 1.90A {Pseudomonas syringae PV}

Probab=99.68  E-value=1.1e-16  Score=143.98  Aligned_cols=114  Identities=11%  Similarity=0.054  Sum_probs=89.5

Q ss_pred             cCCCEEEEcCCceeecCCC------------CCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhC
Q 017982          181 RGFKGVVFDKDNTLTAPYS------------LTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIG  248 (363)
Q Consensus       181 ~GIkaVV~DlDnTL~~~~~------------~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LG  248 (363)
                      .++++|+||+|+||+.+..            ..++|++.++|+.|+ +.|++++|+||+.        ...+..+.. ..
T Consensus         4 ~~~kav~fDlDGTL~d~~~~~~~~~~~~~~~~~~~pg~~e~L~~L~-~~g~~~~i~T~~~--------~~~~~~~~~-~~   73 (196)
T 2oda_A            4 PTFPALLFGLSGCLVDFGAQAATSDTPDDEHAQLTPGAQNALKALR-DQGMPCAWIDELP--------EALSTPLAA-PV   73 (196)
T ss_dssp             -CCSCEEEETBTTTBCTTSTTTSCSSCCGGGGSBCTTHHHHHHHHH-HHTCCEEEECCSC--------HHHHHHHHT-TT
T ss_pred             CcCCEEEEcCCCceEeccccccchhhcccccCCcCcCHHHHHHHHH-HCCCEEEEEcCCh--------HHHHHHhcC-cc
Confidence            4789999999999986321            256899999999998 5699999999985        233333333 22


Q ss_pred             CeEEE----cccCCCch-hHHHHHHHhCCCC-CcEEEEccCCcccHHHHHHcCCeEEEEcCCC
Q 017982          249 IKVIR----HRVKKPAG-TAEEIEKHFGCQS-SQLIMVGDRPFTDIVYGNRNGFLTILTEPLS  305 (363)
Q Consensus       249 i~~I~----~~~kKP~p-~~~~alk~lgl~p-ee~vmVGDrL~TDI~~A~raGi~TIlV~p~~  305 (363)
                      .+.+.    ...+||+| .+..+++++|+.+ ++++||||+. +||.+|+++||.+|+|..+.
T Consensus        74 ~d~v~~~~~~~~~KP~p~~~~~a~~~l~~~~~~~~v~VGDs~-~Di~aA~~aG~~~i~v~~g~  135 (196)
T 2oda_A           74 NDWMIAAPRPTAGWPQPDACWMALMALNVSQLEGCVLISGDP-RLLQSGLNAGLWTIGLASCG  135 (196)
T ss_dssp             TTTCEECCCCSSCTTSTHHHHHHHHHTTCSCSTTCEEEESCH-HHHHHHHHHTCEEEEESSSS
T ss_pred             CCEEEECCcCCCCCCChHHHHHHHHHcCCCCCccEEEEeCCH-HHHHHHHHCCCEEEEEccCC
Confidence            23222    24689999 5789999999976 8999999998 89999999999999998654

>2fpr_A Histidine biosynthesis bifunctional protein HISB; histidinola phosphate phosphatase, bifunctional enzyme structural genomics; 1.70A {Escherichia coli} SCOP: c.108.1.19 PDB: 2fps_A 2fpu_A* 2fpx_A 2fpw_A*

Probab=99.66  E-value=5.9e-17  Score=142.71  Aligned_cols=125  Identities=18%  Similarity=0.209  Sum_probs=94.1

Q ss_pred             HcCCCEEEEcCCceeecCC----------CCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCC--C-----ccHHHHHH
Q 017982          180 RRGFKGVVFDKDNTLTAPY----------SLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEY--D-----NDASKARK  242 (363)
Q Consensus       180 ~~GIkaVV~DlDnTL~~~~----------~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~--d-----p~~~~a~~  242 (363)
                      -.+++++++|+|+||+...          ...++|++.++|+.|+ +.|++++|+||+.+....  .     .....+..
T Consensus        11 ~~~~k~~~~D~Dgtl~~~~~~~~~~~~~~~~~~~pg~~e~L~~L~-~~G~~l~i~Tn~~~~~~~~~~~~~~~~~~~~~~~   89 (176)
T 2fpr_A           11 GSSQKYLFIDRDGTLISEPPSDFQVDRFDKLAFEPGVIPQLLKLQ-KAGYKLVMITNQDGLGTQSFPQADFDGPHNLMMQ   89 (176)
T ss_dssp             --CCEEEEECSBTTTBCCC--CCCCCSGGGCCBCTTHHHHHHHHH-HTTEEEEEEEECTTTTBTTBCHHHHHHHHHHHHH
T ss_pred             CCcCcEEEEeCCCCeEcCCCCCcCcCCHHHCcCCccHHHHHHHHH-HCCCEEEEEECCccccccccchHhhhhhHHHHHH
Confidence            4689999999999997531          3467899999999998 579999999998532110  0     01345677


Q ss_pred             HHHHhCCeE--EE-c--------ccCCCch-hHHHHHHHhCCCCCcEEEEccCCcccHHHHHHcCCeEEEEcCCCC
Q 017982          243 LEGKIGIKV--IR-H--------RVKKPAG-TAEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGFLTILTEPLSL  306 (363)
Q Consensus       243 i~~~LGi~~--I~-~--------~~kKP~p-~~~~alk~lgl~pee~vmVGDrL~TDI~~A~raGi~TIlV~p~~~  306 (363)
                      +++.+|+.+  ++ .        ...||.+ .+..+++++|++|++++||||+. +||.+|+++|+.+|+|.+...
T Consensus        90 ~l~~~gl~fd~v~~s~~~~~~~~~~~KP~p~~~~~~~~~~gi~~~~~l~VGD~~-~Di~~A~~aG~~~i~v~~~~~  164 (176)
T 2fpr_A           90 IFTSQGVQFDEVLICPHLPADECDCRKPKVKLVERYLAEQAMDRANSYVIGDRA-TDIQLAENMGINGLRYDRETL  164 (176)
T ss_dssp             HHHHTTCCEEEEEEECCCGGGCCSSSTTSCGGGGGGC----CCGGGCEEEESSH-HHHHHHHHHTSEEEECBTTTB
T ss_pred             HHHHcCCCeeEEEEcCCCCcccccccCCCHHHHHHHHHHcCCCHHHEEEEcCCH-HHHHHHHHcCCeEEEEcCCcc
Confidence            888888863  32 1        3579998 56889999999999999999999 899999999999999987753

>2gmw_A D,D-heptose 1,7-bisphosphate phosphatase; Zn-binding protein, hydrolase; 1.50A {Escherichia coli} SCOP: c.108.1.19 PDB: 3esq_A 3esr_A 3l1u_A 3l1v_A 3l8e_A 3l8f_A 3l8g_A*

Probab=99.66  E-value=5.2e-16  Score=139.78  Aligned_cols=124  Identities=15%  Similarity=0.197  Sum_probs=96.5

Q ss_pred             CCCEEEEcCCceeecCC-------CCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCC--CCc-----cHHHHHHHHHHh
Q 017982          182 GFKGVVFDKDNTLTAPY-------SLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYE--YDN-----DASKARKLEGKI  247 (363)
Q Consensus       182 GIkaVV~DlDnTL~~~~-------~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~--~dp-----~~~~a~~i~~~L  247 (363)
                      .++++++|+|+||....       ...++|++.++|++|+ +.|++++|+||+.....  ...     ....+..+++.+
T Consensus        24 ~~k~v~~D~DGTL~~~~~~~~~~~~~~~~pg~~e~L~~L~-~~G~~~~ivTn~~~~~~~~~~~~~~~~~~~~~~~~l~~~  102 (211)
T 2gmw_A           24 SVPAIFLDRDGTINVDHGYVHEIDNFEFIDGVIDAMRELK-KMGFALVVVTNQSGIARGKFTEAQFETLTEWMDWSLADR  102 (211)
T ss_dssp             CBCEEEECSBTTTBCCCSSCCSGGGCCBCTTHHHHHHHHH-HTTCEEEEEEECTHHHHTSSCHHHHHHHHHHHHHHHHHT
T ss_pred             cCCEEEEcCCCCeECCCCcccCcccCcCCcCHHHHHHHHH-HCCCeEEEEECcCCcCCCccCHHHHHHHHHHHHHHHHHc
Confidence            58999999999997522       1468999999999998 57999999999961000  000     014566777888


Q ss_pred             CCeE--EE----------------cccCCCch-hHHHHHHHhCCCCCcEEEEccCCcccHHHHHHcCCeE-EEEcCCCCC
Q 017982          248 GIKV--IR----------------HRVKKPAG-TAEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGFLT-ILTEPLSLA  307 (363)
Q Consensus       248 Gi~~--I~----------------~~~kKP~p-~~~~alk~lgl~pee~vmVGDrL~TDI~~A~raGi~T-IlV~p~~~~  307 (363)
                      |+.+  ++                ...+||.+ .++.+++++|++|++++||||+. +||.+|+++|+.+ |+|..+...
T Consensus       103 gl~f~~~~~~~~~~~~~~~~~~~~~~~~KP~p~~~~~~~~~lgi~~~~~~~VGD~~-~Di~~a~~aG~~~~i~v~~g~~~  181 (211)
T 2gmw_A          103 DVDLDGIYYCPHHPQGSVEEFRQVCDCRKPHPGMLLSARDYLHIDMAASYMVGDKL-EDMQAAVAANVGTKVLVRTGKPI  181 (211)
T ss_dssp             TCCCSEEEEECCBTTCSSGGGBSCCSSSTTSCHHHHHHHHHHTBCGGGCEEEESSH-HHHHHHHHTTCSEEEEESSSSCC
T ss_pred             CCceEEEEECCcCCCCcccccCccCcCCCCCHHHHHHHHHHcCCCHHHEEEEcCCH-HHHHHHHHCCCceEEEEecCCCc
Confidence            8752  21                12479998 57899999999999999999999 9999999999999 999876533

>2o2x_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; 1.50A {Mesorhizobium loti} SCOP: c.108.1.19

Probab=99.66  E-value=2.4e-16  Score=141.91  Aligned_cols=139  Identities=19%  Similarity=0.270  Sum_probs=104.0

Q ss_pred             CCCcccCCccCCChHHHHHcCCCEEEEcCCceeecCC-------CCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCC-
Q 017982          162 LPHVTVPDIRYIDWAELQRRGFKGVVFDKDNTLTAPY-------SLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEY-  233 (363)
Q Consensus       162 ~P~~~v~sI~~Id~~~L~~~GIkaVV~DlDnTL~~~~-------~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~-  233 (363)
                      .|..+...+....+    ...++++++|+|+||....       ...++|++.++|++|+ +.|++++|+||+...... 
T Consensus        14 ~p~~~~~~~~~~~~----~~~~k~i~~D~DGtl~~~~~y~~~~~~~~~~~g~~e~L~~L~-~~G~~~~i~Tn~~~~~~~~   88 (218)
T 2o2x_A           14 EPGVWIERIGGRVF----PPHLPALFLDRDGTINVDTDYPSDPAEIVLRPQMLPAIATAN-RAGIPVVVVTNQSGIARGY   88 (218)
T ss_dssp             ETTEEEEECSCCCC----CSSCCCEEECSBTTTBCCCSCTTCGGGCCBCGGGHHHHHHHH-HHTCCEEEEEECHHHHTTS
T ss_pred             CCceeeecccccch----hhcCCEEEEeCCCCcCCCCcccCCcccCeECcCHHHHHHHHH-HCCCEEEEEcCcCCCCccc
Confidence            45555555554443    2468999999999997531       2578999999999998 579999999999520000 


Q ss_pred             -Ccc-----HHHHHHHHHHhCCe--E-E-Ec--------------ccCCCch-hHHHHHHHhCCCCCcEEEEccCCcccH
Q 017982          234 -DND-----ASKARKLEGKIGIK--V-I-RH--------------RVKKPAG-TAEEIEKHFGCQSSQLIMVGDRPFTDI  288 (363)
Q Consensus       234 -dp~-----~~~a~~i~~~LGi~--~-I-~~--------------~~kKP~p-~~~~alk~lgl~pee~vmVGDrL~TDI  288 (363)
                       ...     ...++.+++.+|+.  . + ..              ..+||.+ .++.+++++|++|++++||||++ +||
T Consensus        89 ~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~g~~~~~~~~~~~~KP~~~~~~~~~~~~~i~~~~~~~VGD~~-~Di  167 (218)
T 2o2x_A           89 FGWSAFAAVNGRVLELLREEGVFVDMVLACAYHEAGVGPLAIPDHPMRKPNPGMLVEAGKRLALDLQRSLIVGDKL-ADM  167 (218)
T ss_dssp             CCHHHHHHHHHHHHHHHHHTTCCCSEEEEECCCTTCCSTTCCSSCTTSTTSCHHHHHHHHHHTCCGGGCEEEESSH-HHH
T ss_pred             ccHHHHHHHHHHHHHHHHHcCCceeeEEEeecCCCCceeecccCCccCCCCHHHHHHHHHHcCCCHHHEEEEeCCH-HHH
Confidence             000     03567778888864  2 2 21              3579998 57899999999999999999999 999


Q ss_pred             HHHHHcCCeE-EEEcCCCC
Q 017982          289 VYGNRNGFLT-ILTEPLSL  306 (363)
Q Consensus       289 ~~A~raGi~T-IlV~p~~~  306 (363)
                      .+|+++|+.+ |+|..+..
T Consensus       168 ~~a~~aG~~~~i~v~~g~~  186 (218)
T 2o2x_A          168 QAGKRAGLAQGWLVDGEAA  186 (218)
T ss_dssp             HHHHHTTCSEEEEETCCCE
T ss_pred             HHHHHCCCCEeEEEecCCC
Confidence            9999999999 99986653

>3kbb_A Phosphorylated carbohydrates phosphatase TM_1254; hydrolase, arbohydrate metabolism, COBA magnesium, manganese, metal-binding, nickel; HET: MSE GOL; 1.74A {Thermotoga maritima MSB8}

Probab=99.65  E-value=2.7e-16  Score=138.72  Aligned_cols=94  Identities=11%  Similarity=0.099  Sum_probs=78.8

Q ss_pred             cchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCe----EEE----cccCCCch-hHHHHHHHhCC
Q 017982          202 LWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK----VIR----HRVKKPAG-TAEEIEKHFGC  272 (363)
Q Consensus       202 ~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~----~I~----~~~kKP~p-~~~~alk~lgl  272 (363)
                      .+|++.+.++.|+ +.|++++|+||+.        ...+..+++.+|+.    .+.    .+..||+| .|..+++++|+
T Consensus        85 ~~pg~~~~l~~L~-~~g~~~~i~tn~~--------~~~~~~~l~~~~l~~~fd~~~~~~~~~~~KP~p~~~~~a~~~lg~  155 (216)
T 3kbb_A           85 ENPGVREALEFVK-SKRIKLALATSTP--------QREALERLRRLDLEKYFDVMVFGDQVKNGKPDPEIYLLVLERLNV  155 (216)
T ss_dssp             BCTTHHHHHHHHH-HTTCEEEEECSSC--------HHHHHHHHHHTTCGGGCSEEECGGGSSSCTTSTHHHHHHHHHHTC
T ss_pred             cCccHHHHHHHHH-HcCCCcccccCCc--------HHHHHHHHHhcCCCccccccccccccCCCcccHHHHHHHHHhhCC
Confidence            5678888899998 5799999999996        35677788888875    222    35689999 67999999999


Q ss_pred             CCCcEEEEccCCcccHHHHHHcCCeEEE-EcCCC
Q 017982          273 QSSQLIMVGDRPFTDIVYGNRNGFLTIL-TEPLS  305 (363)
Q Consensus       273 ~pee~vmVGDrL~TDI~~A~raGi~TIl-V~p~~  305 (363)
                      +|++|+||||+. +||.+|+++||.+|| |..+.
T Consensus       156 ~p~e~l~VgDs~-~Di~aA~~aG~~~i~~v~~g~  188 (216)
T 3kbb_A          156 VPEKVVVFEDSK-SGVEAAKSAGIERIYGVVHSL  188 (216)
T ss_dssp             CGGGEEEEECSH-HHHHHHHHTTCCCEEEECCSS
T ss_pred             CccceEEEecCH-HHHHHHHHcCCcEEEEecCCC
Confidence            999999999998 899999999999997 55444

>2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A

Probab=99.63  E-value=5.6e-16  Score=136.37  Aligned_cols=117  Identities=20%  Similarity=0.138  Sum_probs=94.2

Q ss_pred             CCCEEEEcCCceeecC-----------------------CCCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHH
Q 017982          182 GFKGVVFDKDNTLTAP-----------------------YSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDAS  238 (363)
Q Consensus       182 GIkaVV~DlDnTL~~~-----------------------~~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~  238 (363)
                      -+++|+||+|+||...                       ....++|++.++|++|+ +.|++++|+||+..       ..
T Consensus        26 ~~k~vifDlDGTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~e~L~~L~-~~G~~v~ivT~~~~-------~~   97 (187)
T 2wm8_A           26 LPKLAVFDLDYTLWPFWVDTHVDPPFHKSSDGTVRDRRGQDVRLYPEVPEVLKRLQ-SLGVPGAAASRTSE-------IE   97 (187)
T ss_dssp             SCSEEEECSBTTTBSSCTTTSSCSCCEECTTSCEECTTCCEECCCTTHHHHHHHHH-HHTCCEEEEECCSC-------HH
T ss_pred             ccCEEEEcCCCCcchHHHhhccCcchhhhcccchhhccCcccCcchhHHHHHHHHH-HCCceEEEEeCCCC-------hH
Confidence            4899999999999731                       12357899999999998 56999999999951       25


Q ss_pred             HHHHHHHHhCCe--EEE-cccCCCch-hHHHHHHHhCCCCCcEEEEccCCcccHHHHHHcCCeEEEEcCCCCC
Q 017982          239 KARKLEGKIGIK--VIR-HRVKKPAG-TAEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGFLTILTEPLSLA  307 (363)
Q Consensus       239 ~a~~i~~~LGi~--~I~-~~~kKP~p-~~~~alk~lgl~pee~vmVGDrL~TDI~~A~raGi~TIlV~p~~~~  307 (363)
                      .++.+++.+|+.  +-. ....+|.+ .+..+++++|++|++++||||+. +||.+|+++|+.+|+|..+...
T Consensus        98 ~~~~~l~~~gl~~~f~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~igD~~-~Di~~a~~aG~~~i~v~~g~~~  169 (187)
T 2wm8_A           98 GANQLLELFDLFRYFVHREIYPGSKITHFERLQQKTGIPFSQMIFFDDER-RNIVDVSKLGVTCIHIQNGMNL  169 (187)
T ss_dssp             HHHHHHHHTTCTTTEEEEEESSSCHHHHHHHHHHHHCCCGGGEEEEESCH-HHHHHHHTTTCEEEECSSSCCH
T ss_pred             HHHHHHHHcCcHhhcceeEEEeCchHHHHHHHHHHcCCChHHEEEEeCCc-cChHHHHHcCCEEEEECCCCCh
Confidence            677888888886  211 12346666 57889999999999999999997 8999999999999999877643

>4g9b_A Beta-PGM, beta-phosphoglucomutase; HAD, putative phosphoglucomutase, enzyme function initiative structural genomics, isomerase; 1.70A {Escherichia coli}

Probab=99.60  E-value=2.9e-15  Score=136.72  Aligned_cols=93  Identities=13%  Similarity=0.073  Sum_probs=77.5

Q ss_pred             cchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCe----EEE----cccCCCch-hHHHHHHHhCC
Q 017982          202 LWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK----VIR----HRVKKPAG-TAEEIEKHFGC  272 (363)
Q Consensus       202 ~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~----~I~----~~~kKP~p-~~~~alk~lgl  272 (363)
                      ++|++.+.++.|+ +.|++++|+||+.          .+..+++.+|+.    ++.    .+.+||+| .|..+++++|+
T Consensus        96 ~~pg~~~ll~~L~-~~g~~i~i~t~~~----------~~~~~l~~~gl~~~fd~i~~~~~~~~~KP~p~~~~~a~~~lg~  164 (243)
T 4g9b_A           96 VLPGIRSLLADLR-AQQISVGLASVSL----------NAPTILAALELREFFTFCADASQLKNSKPDPEIFLAACAGLGV  164 (243)
T ss_dssp             BCTTHHHHHHHHH-HTTCEEEECCCCT----------THHHHHHHTTCGGGCSEECCGGGCSSCTTSTHHHHHHHHHHTS
T ss_pred             ccccHHHHHHhhh-cccccceeccccc----------chhhhhhhhhhccccccccccccccCCCCcHHHHHHHHHHcCC
Confidence            4678888999998 5799999999974          245567788875    232    34689999 67999999999


Q ss_pred             CCCcEEEEccCCcccHHHHHHcCCeEEEEcCCCC
Q 017982          273 QSSQLIMVGDRPFTDIVYGNRNGFLTILTEPLSL  306 (363)
Q Consensus       273 ~pee~vmVGDrL~TDI~~A~raGi~TIlV~p~~~  306 (363)
                      +|++|+||||+. +||.+|+++||.+|+|..+..
T Consensus       165 ~p~e~l~VgDs~-~di~aA~~aG~~~I~V~~g~~  197 (243)
T 4g9b_A          165 PPQACIGIEDAQ-AGIDAINASGMRSVGIGAGLT  197 (243)
T ss_dssp             CGGGEEEEESSH-HHHHHHHHHTCEEEEESTTCC
T ss_pred             ChHHEEEEcCCH-HHHHHHHHcCCEEEEECCCCC
Confidence            999999999998 899999999999999986543

>3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A*

Probab=99.55  E-value=9e-15  Score=128.18  Aligned_cols=95  Identities=18%  Similarity=0.193  Sum_probs=79.9

Q ss_pred             cchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCe------EEE---cccCCCch-hHHHHHHHhC
Q 017982          202 LWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK------VIR---HRVKKPAG-TAEEIEKHFG  271 (363)
Q Consensus       202 ~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~------~I~---~~~kKP~p-~~~~alk~lg  271 (363)
                      ++|++.++|+.|+ +.|++++|+||+.        ...++.+++.+|+.      .+.   ....||.+ .+..+++++|
T Consensus        71 ~~~~~~~~l~~l~-~~g~~~~i~s~~~--------~~~~~~~l~~~~l~~~f~~~~i~~~~~~~~kp~~~~~~~~~~~~g  141 (205)
T 3m9l_A           71 PAPGAVELVRELA-GRGYRLGILTRNA--------RELAHVTLEAIGLADCFAEADVLGRDEAPPKPHPGGLLKLAEAWD  141 (205)
T ss_dssp             ECTTHHHHHHHHH-HTTCEEEEECSSC--------HHHHHHHHHHTTCGGGSCGGGEECTTTSCCTTSSHHHHHHHHHTT
T ss_pred             CCccHHHHHHHHH-hcCCeEEEEeCCc--------hHHHHHHHHHcCchhhcCcceEEeCCCCCCCCCHHHHHHHHHHcC
Confidence            4678889999998 5799999999996        36677788888873      232   24578988 5799999999


Q ss_pred             CCCCcEEEEccCCcccHHHHHHcCCeEEEEcCCCC
Q 017982          272 CQSSQLIMVGDRPFTDIVYGNRNGFLTILTEPLSL  306 (363)
Q Consensus       272 l~pee~vmVGDrL~TDI~~A~raGi~TIlV~p~~~  306 (363)
                      +++++++||||+. +||.+|+.+|+.+|+|.....
T Consensus       142 ~~~~~~i~iGD~~-~Di~~a~~aG~~~i~v~~~~~  175 (205)
T 3m9l_A          142 VSPSRMVMVGDYR-FDLDCGRAAGTRTVLVNLPDN  175 (205)
T ss_dssp             CCGGGEEEEESSH-HHHHHHHHHTCEEEECSSSSC
T ss_pred             CCHHHEEEECCCH-HHHHHHHHcCCEEEEEeCCCC
Confidence            9999999999999 899999999999999986553

>4gib_A Beta-phosphoglucomutase; rossmann fold, HAD-like, structural genomics, center for structural genomics of infectious DISE csgid, isomerase; 2.27A {Clostridium difficile}

Probab=99.55  E-value=2.4e-14  Score=131.03  Aligned_cols=90  Identities=18%  Similarity=0.144  Sum_probs=73.8

Q ss_pred             cchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCe----EEE----cccCCCch-hHHHHHHHhCC
Q 017982          202 LWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK----VIR----HRVKKPAG-TAEEIEKHFGC  272 (363)
Q Consensus       202 ~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~----~I~----~~~kKP~p-~~~~alk~lgl  272 (363)
                      ++|++.+.++.|+ ..|++++++||+.          .+..+++.+|+.    .+.    ....||+| .+..+++++|+
T Consensus       117 ~~p~~~~ll~~Lk-~~g~~i~i~~~~~----------~~~~~L~~~gl~~~Fd~i~~~~~~~~~KP~p~~~~~a~~~lg~  185 (250)
T 4gib_A          117 ILPGIESLLIDVK-SNNIKIGLSSASK----------NAINVLNHLGISDKFDFIADAGKCKNNKPHPEIFLMSAKGLNV  185 (250)
T ss_dssp             SCTTHHHHHHHHH-HTTCEEEECCSCT----------THHHHHHHHTCGGGCSEECCGGGCCSCTTSSHHHHHHHHHHTC
T ss_pred             cchhHHHHHHHHH-hcccccccccccc----------hhhhHhhhcccccccceeecccccCCCCCcHHHHHHHHHHhCC
Confidence            4678888898998 5799988877763          244567788875    232    24679999 67999999999


Q ss_pred             CCCcEEEEccCCcccHHHHHHcCCeEEEEcC
Q 017982          273 QSSQLIMVGDRPFTDIVYGNRNGFLTILTEP  303 (363)
Q Consensus       273 ~pee~vmVGDrL~TDI~~A~raGi~TIlV~p  303 (363)
                      +|++|+||||+. .||.+|+++||.+|+|..
T Consensus       186 ~p~e~l~VGDs~-~Di~aA~~aG~~~i~v~~  215 (250)
T 4gib_A          186 NPQNCIGIEDAS-AGIDAINSANMFSVGVGN  215 (250)
T ss_dssp             CGGGEEEEESSH-HHHHHHHHTTCEEEEESC
T ss_pred             ChHHeEEECCCH-HHHHHHHHcCCEEEEECC
Confidence            999999999998 899999999999999963

>3um9_A Haloacid dehalogenase, type II; haloacid dehalogenase-like hydrolase protein superfamily, defluorinase, hydrolase; 2.19A {Polaromonas SP}

Probab=99.53  E-value=8.4e-14  Score=122.42  Aligned_cols=95  Identities=18%  Similarity=0.235  Sum_probs=80.0

Q ss_pred             CcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCe----EEE----cccCCCch-hHHHHHHHhC
Q 017982          201 TLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK----VIR----HRVKKPAG-TAEEIEKHFG  271 (363)
Q Consensus       201 ~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~----~I~----~~~kKP~p-~~~~alk~lg  271 (363)
                      .++|++.++|+.|+ +.|++++|+||..        ...++.+++.+|+.    .+.    ....||.+ .+..+++++|
T Consensus        96 ~~~~~~~~~l~~l~-~~g~~~~i~s~~~--------~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~  166 (230)
T 3um9_A           96 TPFADVPQALQQLR-AAGLKTAILSNGS--------RHSIRQVVGNSGLTNSFDHLISVDEVRLFKPHQKVYELAMDTLH  166 (230)
T ss_dssp             CBCTTHHHHHHHHH-HTTCEEEEEESSC--------HHHHHHHHHHHTCGGGCSEEEEGGGTTCCTTCHHHHHHHHHHHT
T ss_pred             CCCCCHHHHHHHHH-hCCCeEEEEeCCC--------HHHHHHHHHHCCChhhcceeEehhhcccCCCChHHHHHHHHHhC
Confidence            45788999999998 5799999999996        35677778888874    232    24579998 5799999999


Q ss_pred             CCCCcEEEEccCCcccHHHHHHcCCeEEEEcCCC
Q 017982          272 CQSSQLIMVGDRPFTDIVYGNRNGFLTILTEPLS  305 (363)
Q Consensus       272 l~pee~vmVGDrL~TDI~~A~raGi~TIlV~p~~  305 (363)
                      ++|++++||||+. +||.+|+++|+.+++|..+.
T Consensus       167 ~~~~~~~~iGD~~-~Di~~a~~aG~~~~~~~~~~  199 (230)
T 3um9_A          167 LGESEILFVSCNS-WDATGAKYFGYPVCWINRSN  199 (230)
T ss_dssp             CCGGGEEEEESCH-HHHHHHHHHTCCEEEECTTS
T ss_pred             CCcccEEEEeCCH-HHHHHHHHCCCEEEEEeCCC
Confidence            9999999999998 89999999999999998654

>2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus}

Probab=99.53  E-value=2.5e-14  Score=122.34  Aligned_cols=110  Identities=18%  Similarity=0.192  Sum_probs=89.3

Q ss_pred             cCCCEEEEcCCceeecCCC---------CCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCeE
Q 017982          181 RGFKGVVFDKDNTLTAPYS---------LTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKV  251 (363)
Q Consensus       181 ~GIkaVV~DlDnTL~~~~~---------~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~~  251 (363)
                      ..+++++||+|+||.....         ....++..++|+.|+ +.|++++|+||+..        ..++.+++.+|+..
T Consensus         7 ~~~k~v~~DlDGTL~~~~~~~~~~~~~~~~~~~~~~~~l~~l~-~~g~~~~i~T~~~~--------~~~~~~l~~~gl~~   77 (162)
T 2p9j_A            7 KKLKLLIMDIDGVLTDGKLYYTEHGETIKVFNVLDGIGIKLLQ-KMGITLAVISGRDS--------APLITRLKELGVEE   77 (162)
T ss_dssp             HHCCEEEECCTTTTSCSEEEEETTEEEEEEEEHHHHHHHHHHH-TTTCEEEEEESCCC--------HHHHHHHHHTTCCE
T ss_pred             cceeEEEEecCcceECCceeecCCCceeeeecccHHHHHHHHH-HCCCEEEEEeCCCc--------HHHHHHHHHcCCHh
Confidence            3589999999999974211         123567889999998 67999999999962        67788889999986


Q ss_pred             EEcccCCCch-hHHHHHHHhCCCCCcEEEEccCCcccHHHHHHcCCeEEEE
Q 017982          252 IRHRVKKPAG-TAEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGFLTILT  301 (363)
Q Consensus       252 I~~~~kKP~p-~~~~alk~lgl~pee~vmVGDrL~TDI~~A~raGi~TIlV  301 (363)
                      ++ ...||.+ .+..+++.+++++++++||||+. +|+.+|+++|+.++++
T Consensus        78 ~~-~~~kp~~~~~~~~~~~~~~~~~~~~~vGD~~-~Di~~a~~ag~~~~~~  126 (162)
T 2p9j_A           78 IY-TGSYKKLEIYEKIKEKYSLKDEEIGFIGDDV-VDIEVMKKVGFPVAVR  126 (162)
T ss_dssp             EE-ECC--CHHHHHHHHHHTTCCGGGEEEEECSG-GGHHHHHHSSEEEECT
T ss_pred             hc-cCCCCCHHHHHHHHHHcCCCHHHEEEECCCH-HHHHHHHHCCCeEEec
Confidence            54 3478888 57889999999999999999999 8999999999987754

>3ij5_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; IDP022 hydrolase, lipopolysaccharide biosynthesis, magnesium, STRU genomics; 1.95A {Yersinia pestis}

Probab=99.53  E-value=2.6e-14  Score=130.71  Aligned_cols=133  Identities=12%  Similarity=0.099  Sum_probs=100.3

Q ss_pred             hcCCCCCCCCcccCCccCCChHHHHH--cCCCEEEEcCCceeecCC------CC-----CcchhHHHHHHHHHHhCCCeE
Q 017982          155 AKDRHLALPHVTVPDIRYIDWAELQR--RGFKGVVFDKDNTLTAPY------SL-----TLWGPLSSSIEQCKSVFGHDI  221 (363)
Q Consensus       155 ~~~P~L~~P~~~v~sI~~Id~~~L~~--~GIkaVV~DlDnTL~~~~------~~-----~~~p~v~e~L~~Lk~~~Gikl  221 (363)
                      +..+.-+.|+.++.+++++..+.|++  .++++|+||+|+||+...      ..     ...++.  +|+.|+ +.|+++
T Consensus        19 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ik~viFDlDGTL~Ds~~~~~~~~~~~~~~~~~d~~--~L~~L~-~~G~~l   95 (211)
T 3ij5_A           19 YFQSNAMSNTAYIDTCYGPVADDVIQRAANIRLLICDVDGVMSDGLIYMGNQGEELKAFNVRDGY--GIRCLI-TSDIDV   95 (211)
T ss_dssp             --------CCCEECCTTSCEEHHHHHHHTTCSEEEECCTTTTSSSEEEEETTSCEEEEEEHHHHH--HHHHHH-HTTCEE
T ss_pred             eeehhhhhCCCCcccccCcccHHHHHHHhCCCEEEEeCCCCEECCHHHHhhhhHHHHHhccchHH--HHHHHH-HCCCEE
Confidence            33455678888888888887777764  789999999999987411      00     111222  788888 589999


Q ss_pred             EEEeCCCCCCCCCccHHHHHHHHHHhCCeEEEcccCCCch-hHHHHHHHhCCCCCcEEEEccCCcccHHHHHHcCCeEEE
Q 017982          222 AVFSNSAGLYEYDNDASKARKLEGKIGIKVIRHRVKKPAG-TAEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGFLTIL  300 (363)
Q Consensus       222 ~IVSN~~g~~~~dp~~~~a~~i~~~LGi~~I~~~~kKP~p-~~~~alk~lgl~pee~vmVGDrL~TDI~~A~raGi~TIl  300 (363)
                      +|+||+.        ...++.+++.+|+..++... ||.+ .+..+++.+|+++++++||||+. .|+.+++++|+..+.
T Consensus        96 ~I~T~~~--------~~~~~~~l~~lgi~~~f~~~-k~K~~~l~~~~~~lg~~~~~~~~vGDs~-nDi~~~~~ag~~~a~  165 (211)
T 3ij5_A           96 AIITGRR--------AKLLEDRANTLGITHLYQGQ-SDKLVAYHELLATLQCQPEQVAYIGDDL-IDWPVMAQVGLSVAV  165 (211)
T ss_dssp             EEECSSC--------CHHHHHHHHHHTCCEEECSC-SSHHHHHHHHHHHHTCCGGGEEEEECSG-GGHHHHTTSSEEEEC
T ss_pred             EEEeCCC--------HHHHHHHHHHcCCchhhccc-CChHHHHHHHHHHcCcCcceEEEEcCCH-HHHHHHHHCCCEEEe
Confidence            9999996        36788999999998765433 7777 57899999999999999999999 899999999987554

>3umb_A Dehalogenase-like hydrolase; 2.20A {Ralstonia solanacearum}

Probab=99.53  E-value=5.1e-14  Score=124.34  Aligned_cols=94  Identities=18%  Similarity=0.241  Sum_probs=78.7

Q ss_pred             cchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCe----EEE----cccCCCch-hHHHHHHHhCC
Q 017982          202 LWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK----VIR----HRVKKPAG-TAEEIEKHFGC  272 (363)
Q Consensus       202 ~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~----~I~----~~~kKP~p-~~~~alk~lgl  272 (363)
                      ++|++.++|+.|+ +.|++++|+||+.        ...+..+++.+|+.    .+.    ....||.+ .+..+++++|+
T Consensus       100 ~~~~~~~~l~~l~-~~g~~~~i~t~~~--------~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~  170 (233)
T 3umb_A          100 AFPENVPVLRQLR-EMGLPLGILSNGN--------PQMLEIAVKSAGMSGLFDHVLSVDAVRLYKTAPAAYALAPRAFGV  170 (233)
T ss_dssp             ECTTHHHHHHHHH-TTTCCEEEEESSC--------HHHHHHHHHTTTCTTTCSEEEEGGGTTCCTTSHHHHTHHHHHHTS
T ss_pred             CCCCHHHHHHHHH-hCCCcEEEEeCCC--------HHHHHHHHHHCCcHhhcCEEEEecccCCCCcCHHHHHHHHHHhCC
Confidence            4678888899998 5799999999996        35677778888864    232    24679998 57899999999


Q ss_pred             CCCcEEEEccCCcccHHHHHHcCCeEEEEcCCC
Q 017982          273 QSSQLIMVGDRPFTDIVYGNRNGFLTILTEPLS  305 (363)
Q Consensus       273 ~pee~vmVGDrL~TDI~~A~raGi~TIlV~p~~  305 (363)
                      +|++++||||+. +||.+|+.+|+.+++|..+.
T Consensus       171 ~~~~~~~vGD~~-~Di~~a~~~G~~~~~v~~~~  202 (233)
T 3umb_A          171 PAAQILFVSSNG-WDACGATWHGFTTFWINRLG  202 (233)
T ss_dssp             CGGGEEEEESCH-HHHHHHHHHTCEEEEECTTC
T ss_pred             CcccEEEEeCCH-HHHHHHHHcCCEEEEEcCCC
Confidence            999999999996 89999999999999998554

>2no4_A (S)-2-haloacid dehalogenase IVA; HAD superfamily, rossman fold, hydrol; 1.93A {Burkholderia cepacia} PDB: 2no5_A*

Probab=99.51  E-value=4.1e-14  Score=126.63  Aligned_cols=93  Identities=15%  Similarity=0.174  Sum_probs=78.4

Q ss_pred             chhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCe----EEE----cccCCCch-hHHHHHHHhCCC
Q 017982          203 WGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK----VIR----HRVKKPAG-TAEEIEKHFGCQ  273 (363)
Q Consensus       203 ~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~----~I~----~~~kKP~p-~~~~alk~lgl~  273 (363)
                      +|++.+.|+.|+ +.|++++|+||+.        ...++.+++.+|+.    .+.    ....||.+ .+..+++++|++
T Consensus       107 ~~~~~~~l~~l~-~~g~~~~i~s~~~--------~~~~~~~l~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~  177 (240)
T 2no4_A          107 YPDAAETLEKLK-SAGYIVAILSNGN--------DEMLQAALKASKLDRVLDSCLSADDLKIYKPDPRIYQFACDRLGVN  177 (240)
T ss_dssp             CTTHHHHHHHHH-HTTCEEEEEESSC--------HHHHHHHHHHTTCGGGCSEEEEGGGTTCCTTSHHHHHHHHHHHTCC
T ss_pred             CCCHHHHHHHHH-HCCCEEEEEcCCC--------HHHHHHHHHhcCcHHHcCEEEEccccCCCCCCHHHHHHHHHHcCCC
Confidence            488889999998 5799999999996        35677788888875    232    24579998 578999999999


Q ss_pred             CCcEEEEccCCcccHHHHHHcCCeEEEEcCCC
Q 017982          274 SSQLIMVGDRPFTDIVYGNRNGFLTILTEPLS  305 (363)
Q Consensus       274 pee~vmVGDrL~TDI~~A~raGi~TIlV~p~~  305 (363)
                      |++++||||+. .||.+|+++|+.+++|..+.
T Consensus       178 ~~~~~~iGD~~-~Di~~a~~aG~~~~~v~~~~  208 (240)
T 2no4_A          178 PNEVCFVSSNA-WDLGGAGKFGFNTVRINRQG  208 (240)
T ss_dssp             GGGEEEEESCH-HHHHHHHHHTCEEEEECTTC
T ss_pred             cccEEEEeCCH-HHHHHHHHCCCEEEEECCCC
Confidence            99999999997 89999999999999998654

>3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis}

Probab=99.51  E-value=5.9e-14  Score=124.32  Aligned_cols=95  Identities=18%  Similarity=0.183  Sum_probs=78.3

Q ss_pred             cchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCe----EEE----cccCCCch-hHHHHHHHhCC
Q 017982          202 LWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK----VIR----HRVKKPAG-TAEEIEKHFGC  272 (363)
Q Consensus       202 ~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~----~I~----~~~kKP~p-~~~~alk~lgl  272 (363)
                      ++|++.+.|+.|+ +.|++++|+||+.        ...++.+++.+|+.    .+.    ....||.+ .+..+++++|+
T Consensus       104 ~~~~~~~~l~~l~-~~g~~~~i~T~~~--------~~~~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~lgi  174 (231)
T 3kzx_A          104 LNDGAIELLDTLK-ENNITMAIVSNKN--------GERLRSEIHHKNLTHYFDSIIGSGDTGTIKPSPEPVLAALTNINI  174 (231)
T ss_dssp             ECTTHHHHHHHHH-HTTCEEEEEEEEE--------HHHHHHHHHHTTCGGGCSEEEEETSSSCCTTSSHHHHHHHHHHTC
T ss_pred             ECcCHHHHHHHHH-HCCCeEEEEECCC--------HHHHHHHHHHCCchhheeeEEcccccCCCCCChHHHHHHHHHcCC
Confidence            4678888999998 5799999999995        36677888888874    232    24679998 67999999999


Q ss_pred             CCC-cEEEEccCCcccHHHHHHcCCeEEEEcCCCC
Q 017982          273 QSS-QLIMVGDRPFTDIVYGNRNGFLTILTEPLSL  306 (363)
Q Consensus       273 ~pe-e~vmVGDrL~TDI~~A~raGi~TIlV~p~~~  306 (363)
                      +|+ +++||||+. +||.+|+++|+.+|+|.+...
T Consensus       175 ~~~~~~v~vGD~~-~Di~~a~~aG~~~v~~~~~~~  208 (231)
T 3kzx_A          175 EPSKEVFFIGDSI-SDIQSAIEAGCLPIKYGSTNI  208 (231)
T ss_dssp             CCSTTEEEEESSH-HHHHHHHHTTCEEEEECC---
T ss_pred             CcccCEEEEcCCH-HHHHHHHHCCCeEEEECCCCC
Confidence            999 999999999 999999999999999975543

>1zrn_A L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseudomonas SP} SCOP: c.108.1.1 PDB: 1zrm_A 1jud_A 1qh9_A

Probab=99.50  E-value=4.1e-14  Score=125.43  Aligned_cols=93  Identities=20%  Similarity=0.283  Sum_probs=78.3

Q ss_pred             cchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCe----EEE----cccCCCch-hHHHHHHHhCC
Q 017982          202 LWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK----VIR----HRVKKPAG-TAEEIEKHFGC  272 (363)
Q Consensus       202 ~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~----~I~----~~~kKP~p-~~~~alk~lgl  272 (363)
                      ++|++.+.|+.|+ +.|++++|+||+.        ...++.+++.+|+.    .+.    ....||.+ .+..+++++|+
T Consensus        96 ~~~~~~~~l~~l~-~~g~~~~i~t~~~--------~~~~~~~l~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~  166 (232)
T 1zrn_A           96 PFSEVPDSLRELK-RRGLKLAILSNGS--------PQSIDAVVSHAGLRDGFDHLLSVDPVQVYKPDNRVYELAEQALGL  166 (232)
T ss_dssp             ECTTHHHHHHHHH-HTTCEEEEEESSC--------HHHHHHHHHHTTCGGGCSEEEESGGGTCCTTSHHHHHHHHHHHTS
T ss_pred             CCccHHHHHHHHH-HCCCEEEEEeCCC--------HHHHHHHHHhcChHhhhheEEEecccCCCCCCHHHHHHHHHHcCC
Confidence            4578889999998 5799999999996        35667778888874    232    24579998 57899999999


Q ss_pred             CCCcEEEEccCCcccHHHHHHcCCeEEEEcCC
Q 017982          273 QSSQLIMVGDRPFTDIVYGNRNGFLTILTEPL  304 (363)
Q Consensus       273 ~pee~vmVGDrL~TDI~~A~raGi~TIlV~p~  304 (363)
                      +|++++||||+. +||.+|+++|+.+++|...
T Consensus       167 ~~~~~~~iGD~~-~Di~~a~~aG~~~~~~~~~  197 (232)
T 1zrn_A          167 DRSAILFVASNA-WDATGARYFGFPTCWINRT  197 (232)
T ss_dssp             CGGGEEEEESCH-HHHHHHHHHTCCEEEECTT
T ss_pred             CcccEEEEeCCH-HHHHHHHHcCCEEEEEcCC
Confidence            999999999998 8999999999999999865

>3k1z_A Haloacid dehalogenase-like hydrolase domain-conta protein 3; HDHD3, haloacid dehalogenase-like hydrolase domain containin structural genomics; 1.55A {Homo sapiens}

Probab=99.48  E-value=9.4e-14  Score=127.48  Aligned_cols=96  Identities=18%  Similarity=0.225  Sum_probs=80.3

Q ss_pred             CcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCe----EEE----cccCCCch-hHHHHHHHhC
Q 017982          201 TLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK----VIR----HRVKKPAG-TAEEIEKHFG  271 (363)
Q Consensus       201 ~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~----~I~----~~~kKP~p-~~~~alk~lg  271 (363)
                      .++|++.++|+.|+ +.|++++|+||..         ..+..+++.+|+.    .+.    ....||.+ .+..+++++|
T Consensus       106 ~~~~~~~~~l~~l~-~~g~~~~i~tn~~---------~~~~~~l~~~gl~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~g  175 (263)
T 3k1z_A          106 QVLDGAEDTLRECR-TRGLRLAVISNFD---------RRLEGILGGLGLREHFDFVLTSEAAGWPKPDPRIFQEALRLAH  175 (263)
T ss_dssp             EECTTHHHHHHHHH-HTTCEEEEEESCC---------TTHHHHHHHTTCGGGCSCEEEHHHHSSCTTSHHHHHHHHHHHT
T ss_pred             eECcCHHHHHHHHH-hCCCcEEEEeCCc---------HHHHHHHHhCCcHHhhhEEEeecccCCCCCCHHHHHHHHHHcC
Confidence            46889999999998 5799999999975         2356777888874    222    24689998 5789999999


Q ss_pred             CCCCcEEEEccCCcccHHHHHHcCCeEEEEcCCCC
Q 017982          272 CQSSQLIMVGDRPFTDIVYGNRNGFLTILTEPLSL  306 (363)
Q Consensus       272 l~pee~vmVGDrL~TDI~~A~raGi~TIlV~p~~~  306 (363)
                      ++|++++||||++.+||.+|+++|+.+|+|.....
T Consensus       176 ~~~~~~~~vGD~~~~Di~~a~~aG~~~i~~~~~~~  210 (263)
T 3k1z_A          176 MEPVVAAHVGDNYLCDYQGPRAVGMHSFLVVGPQA  210 (263)
T ss_dssp             CCGGGEEEEESCHHHHTHHHHTTTCEEEEECCSSC
T ss_pred             CCHHHEEEECCCcHHHHHHHHHCCCEEEEEcCCCC
Confidence            99999999999976899999999999999986653

>3e8m_A Acylneuraminate cytidylyltransferase; 2-keto-3-deoxynononic acid 9-phosphate phosphohydrolase, nucleotidyltransferase; HET: PEG PG4 EDO PGE; 1.10A {Bacteroides thetaiotaomicron} PDB: 3e84_A 3e81_A*

Probab=99.48  E-value=4.4e-14  Score=121.05  Aligned_cols=109  Identities=18%  Similarity=0.160  Sum_probs=86.5

Q ss_pred             CCCEEEEcCCceeecCC---CCC------cchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCeEE
Q 017982          182 GFKGVVFDKDNTLTAPY---SLT------LWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKVI  252 (363)
Q Consensus       182 GIkaVV~DlDnTL~~~~---~~~------~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~~I  252 (363)
                      ++++++||+|+||+...   ...      ....-...|+.|+ +.|++++|+||+.        ...++.+++.+|+..+
T Consensus         3 ~ik~vifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~~l~~l~-~~g~~~~i~T~~~--------~~~~~~~~~~~gl~~~   73 (164)
T 3e8m_A            3 EIKLILTDIDGVWTDGGMFYDQTGNEWKKFNTSDSAGIFWAH-NKGIPVGILTGEK--------TEIVRRRAEKLKVDYL   73 (164)
T ss_dssp             CCCEEEECSTTTTSSSEEEECSSSCEEEEEEGGGHHHHHHHH-HTTCCEEEECSSC--------CHHHHHHHHHTTCSEE
T ss_pred             cceEEEEcCCCceEcCcEEEcCCCcEEEEecCChHHHHHHHH-HCCCEEEEEeCCC--------hHHHHHHHHHcCCCEe
Confidence            68999999999997621   111      1111122488888 5799999999996        3678889999999866


Q ss_pred             EcccCCCch-hHHHHHHHhCCCCCcEEEEccCCcccHHHHHHcCCeEEEE
Q 017982          253 RHRVKKPAG-TAEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGFLTILT  301 (363)
Q Consensus       253 ~~~~kKP~p-~~~~alk~lgl~pee~vmVGDrL~TDI~~A~raGi~TIlV  301 (363)
                      +. ..||.+ .+..+++++|+++++++||||+. +|+.+|+++|+.++..
T Consensus        74 ~~-~~kpk~~~~~~~~~~~~~~~~~~~~vGD~~-~Di~~~~~ag~~~~~~  121 (164)
T 3e8m_A           74 FQ-GVVDKLSAAEELCNELGINLEQVAYIGDDL-NDAKLLKRVGIAGVPA  121 (164)
T ss_dssp             EC-SCSCHHHHHHHHHHHHTCCGGGEEEECCSG-GGHHHHTTSSEEECCT
T ss_pred             ec-ccCChHHHHHHHHHHcCCCHHHEEEECCCH-HHHHHHHHCCCeEEcC
Confidence            53 459998 57899999999999999999999 8999999999977653

>4ex6_A ALNB; modified rossman fold, phosphatase, magnesium binding, hydro; 1.25A {Streptomyces SP} PDB: 4ex7_A

Probab=99.48  E-value=2.4e-13  Score=120.61  Aligned_cols=94  Identities=19%  Similarity=0.293  Sum_probs=78.9

Q ss_pred             cchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCe----EEE----cccCCCch-hHHHHHHHhCC
Q 017982          202 LWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK----VIR----HRVKKPAG-TAEEIEKHFGC  272 (363)
Q Consensus       202 ~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~----~I~----~~~kKP~p-~~~~alk~lgl  272 (363)
                      ++|++.+.|+.|+ +.|++++|+||..        ...++.+++.+|+.    .+.    ....||.+ .+..+++++|+
T Consensus       105 ~~~~~~~~l~~l~-~~g~~~~i~s~~~--------~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~lg~  175 (237)
T 4ex6_A          105 LYPGVLEGLDRLS-AAGFRLAMATSKV--------EKAARAIAELTGLDTRLTVIAGDDSVERGKPHPDMALHVARGLGI  175 (237)
T ss_dssp             BCTTHHHHHHHHH-HTTEEEEEECSSC--------HHHHHHHHHHHTGGGTCSEEECTTTSSSCTTSSHHHHHHHHHHTC
T ss_pred             cCCCHHHHHHHHH-hCCCcEEEEcCCC--------hHHHHHHHHHcCchhheeeEEeCCCCCCCCCCHHHHHHHHHHcCC
Confidence            4667888898998 5799999999996        35677888888864    332    24579988 67999999999


Q ss_pred             CCCcEEEEccCCcccHHHHHHcCCeEEEEcCCC
Q 017982          273 QSSQLIMVGDRPFTDIVYGNRNGFLTILTEPLS  305 (363)
Q Consensus       273 ~pee~vmVGDrL~TDI~~A~raGi~TIlV~p~~  305 (363)
                      +|++++||||+. +||.+|+.+|+.+|+|..+.
T Consensus       176 ~~~~~i~vGD~~-~Di~~a~~aG~~~i~v~~g~  207 (237)
T 4ex6_A          176 PPERCVVIGDGV-PDAEMGRAAGMTVIGVSYGV  207 (237)
T ss_dssp             CGGGEEEEESSH-HHHHHHHHTTCEEEEESSSS
T ss_pred             CHHHeEEEcCCH-HHHHHHHHCCCeEEEEecCC
Confidence            999999999999 89999999999999998664

>3u26_A PF00702 domain protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 1.59A {Pyrococcus horikoshii} SCOP: c.108.1.1 PDB: 1x42_A

Probab=99.47  E-value=1.3e-13  Score=121.57  Aligned_cols=97  Identities=22%  Similarity=0.266  Sum_probs=80.1

Q ss_pred             CcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCe----EEE----cccCCCch-hHHHHHHHhC
Q 017982          201 TLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK----VIR----HRVKKPAG-TAEEIEKHFG  271 (363)
Q Consensus       201 ~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~----~I~----~~~kKP~p-~~~~alk~lg  271 (363)
                      .++|++.++|+.|+ +. ++++|+||..        ...+..+++.+|+.    .+.    ....||.+ .+..+++++|
T Consensus       100 ~~~~~~~~~l~~l~-~~-~~~~i~t~~~--------~~~~~~~l~~~~~~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~  169 (234)
T 3u26_A          100 ELYPEVVEVLKSLK-GK-YHVGMITDSD--------TEQAMAFLDALGIKDLFDSITTSEEAGFFKPHPRIFELALKKAG  169 (234)
T ss_dssp             CBCTTHHHHHHHHT-TT-SEEEEEESSC--------HHHHHHHHHHTTCGGGCSEEEEHHHHTBCTTSHHHHHHHHHHHT
T ss_pred             CcCcCHHHHHHHHH-hC-CcEEEEECCC--------HHHHHHHHHHcCcHHHcceeEeccccCCCCcCHHHHHHHHHHcC
Confidence            35678888999987 45 8999999996        35667778888875    232    24589998 5789999999


Q ss_pred             CCCCcEEEEccCCcccHHHHHHcCCeEEEEcCCCCC
Q 017982          272 CQSSQLIMVGDRPFTDIVYGNRNGFLTILTEPLSLA  307 (363)
Q Consensus       272 l~pee~vmVGDrL~TDI~~A~raGi~TIlV~p~~~~  307 (363)
                      ++|++++||||++.+||.+|+.+|+.+++|..+...
T Consensus       170 ~~~~~~~~vGD~~~~Di~~a~~aG~~~~~v~~~~~~  205 (234)
T 3u26_A          170 VKGEEAVYVGDNPVKDCGGSKNLGMTSILLDRKGEK  205 (234)
T ss_dssp             CCGGGEEEEESCTTTTHHHHHTTTCEEEEECSSSTT
T ss_pred             CCchhEEEEcCCcHHHHHHHHHcCCEEEEECCCCCc
Confidence            999999999999868999999999999999876544

>3zvl_A Bifunctional polynucleotide phosphatase/kinase; hydrolase-transferase complex, base excision repair, BER, non-homologous END-joining, NHEJ; 1.65A {Mus musculus} PDB: 3zvm_A* 3zvn_A* 1yj5_A 3u7e_B* 3u7f_B* 3u7h_B* 3u7g_A*

Probab=99.47  E-value=1.4e-13  Score=137.53  Aligned_cols=119  Identities=18%  Similarity=0.276  Sum_probs=92.2

Q ss_pred             CCCEEEEcCCceeecCC----------CC-CcchhHHHHHHHHHHhCCCeEEEEeCCCCCCC--CCc--cHHHHHHHHHH
Q 017982          182 GFKGVVFDKDNTLTAPY----------SL-TLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYE--YDN--DASKARKLEGK  246 (363)
Q Consensus       182 GIkaVV~DlDnTL~~~~----------~~-~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~--~dp--~~~~a~~i~~~  246 (363)
                      .+++++||+|+||+...          .+ .++|++.++|+.|+ +.|++++|+||+.+...  +..  ....+..+++.
T Consensus        57 ~~k~v~fD~DGTL~~~~~~~~~~~~~~~~~~~~pgv~e~L~~L~-~~G~~l~IvTN~~gi~~g~~~~~~~~~~~~~~l~~  135 (416)
T 3zvl_A           57 QGKVAAFDLDGTLITTRSGKVFPTSPSDWRILYPEIPKKLQELA-AEGYKLVIFTNQMGIGRGKLPAEVFKGKVEAVLEK  135 (416)
T ss_dssp             CSSEEEECSBTTTEECSSCSSSCSSTTCCEESCTTHHHHHHHHH-HTTCEEEEEEECHHHHTTSSCHHHHHHHHHHHHHH
T ss_pred             CCeEEEEeCCCCccccCCCccCCCCHHHhhhhcccHHHHHHHHH-HCCCeEEEEeCCccccCCCCCHHHHHHHHHHHHHH
Confidence            68999999999997422          12 26899999999998 68999999999752110  000  01346788888


Q ss_pred             hCCeE--EE----cccCCCch-hHHHHHHHhC----CCCCcEEEEccCC----------------cccHHHHHHcCCeEE
Q 017982          247 IGIKV--IR----HRVKKPAG-TAEEIEKHFG----CQSSQLIMVGDRP----------------FTDIVYGNRNGFLTI  299 (363)
Q Consensus       247 LGi~~--I~----~~~kKP~p-~~~~alk~lg----l~pee~vmVGDrL----------------~TDI~~A~raGi~TI  299 (363)
                      +|+.+  +.    ...+||++ .+..+++++|    +++++++||||++                .+||.+|+++|+.++
T Consensus       136 lgl~fd~i~~~~~~~~~KP~p~~~~~a~~~l~~~~~v~~~~~l~VGDs~gr~~~~~~~~~~~d~s~~Di~~A~~aGi~f~  215 (416)
T 3zvl_A          136 LGVPFQVLVATHAGLNRKPVSGMWDHLQEQANEGIPISVEDSVFVGDAAGRLANWAPGRKKKDFSCADRLFALNVGLPFA  215 (416)
T ss_dssp             HTSCCEEEEECSSSTTSTTSSHHHHHHHHHSSTTCCCCGGGCEEECSCSCBCTTSSTTCCSCCSCCHHHHHHHHHTCCEE
T ss_pred             cCCCEEEEEECCCCCCCCCCHHHHHHHHHHhCCCCCCCHHHeEEEECCCCCcccccccccccCCChhhHHHHHHcCCccc
Confidence            99763  32    34689999 5689999997    9999999999998                589999999999876


Q ss_pred             EE
Q 017982          300 LT  301 (363)
Q Consensus       300 lV  301 (363)
                      ..
T Consensus       216 ~p  217 (416)
T 3zvl_A          216 TP  217 (416)
T ss_dssp             CH
T ss_pred             Cc
Confidence            54

>3ed5_A YFNB; APC60080, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.72A {Bacillus subtilis} PDB: 3i76_A

Probab=99.47  E-value=3e-13  Score=119.20  Aligned_cols=95  Identities=18%  Similarity=0.158  Sum_probs=79.0

Q ss_pred             CcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCe----EEE----cccCCCch-hHHHHHHHhC
Q 017982          201 TLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK----VIR----HRVKKPAG-TAEEIEKHFG  271 (363)
Q Consensus       201 ~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~----~I~----~~~kKP~p-~~~~alk~lg  271 (363)
                      .++|++.++|+.|+ +. ++++|+||..        ...++.+++.+|+.    .+.    ....||.+ .+..+++++|
T Consensus       103 ~~~~~~~~~l~~l~-~~-~~~~i~t~~~--------~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~g  172 (238)
T 3ed5_A          103 QLIDGAFDLISNLQ-QQ-FDLYIVTNGV--------SHTQYKRLRDSGLFPFFKDIFVSEDTGFQKPMKEYFNYVFERIP  172 (238)
T ss_dssp             CBCTTHHHHHHHHH-TT-SEEEEEECSC--------HHHHHHHHHHTTCGGGCSEEEEGGGTTSCTTCHHHHHHHHHTST
T ss_pred             CCCccHHHHHHHHH-hc-CeEEEEeCCC--------HHHHHHHHHHcChHhhhheEEEecccCCCCCChHHHHHHHHHcC
Confidence            45788889999998 45 8999999986        35667777888875    222    24689998 5789999999


Q ss_pred             -CCCCcEEEEccCCcccHHHHHHcCCeEEEEcCCC
Q 017982          272 -CQSSQLIMVGDRPFTDIVYGNRNGFLTILTEPLS  305 (363)
Q Consensus       272 -l~pee~vmVGDrL~TDI~~A~raGi~TIlV~p~~  305 (363)
                       ++|++++||||+..+||.+|+++|+.+|+|..+.
T Consensus       173 ~~~~~~~i~vGD~~~~Di~~a~~aG~~~i~~~~~~  207 (238)
T 3ed5_A          173 QFSAEHTLIIGDSLTADIKGGQLAGLDTCWMNPDM  207 (238)
T ss_dssp             TCCGGGEEEEESCTTTTHHHHHHTTCEEEEECTTC
T ss_pred             CCChhHeEEECCCcHHHHHHHHHCCCEEEEECCCC
Confidence             9999999999998679999999999999998763

>3iru_A Phoshonoacetaldehyde hydrolase like protein; phosphonoacetaldehyde hydrolase like P structural genomics, PSI-2, protein structure initiative; 2.30A {Oleispira antarctica} SCOP: c.108.1.0

Probab=99.47  E-value=4.4e-13  Score=121.04  Aligned_cols=94  Identities=13%  Similarity=-0.003  Sum_probs=76.3

Q ss_pred             cchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCC-----eEEE----cccCCCch-hHHHHHHHhC
Q 017982          202 LWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGI-----KVIR----HRVKKPAG-TAEEIEKHFG  271 (363)
Q Consensus       202 ~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi-----~~I~----~~~kKP~p-~~~~alk~lg  271 (363)
                      ++|++.+.|+.|+ +.|++++|+||..        ...++.+++.+|+     +.+.    ...+||.+ .+..+++++|
T Consensus       112 ~~~~~~~~l~~l~-~~g~~~~i~tn~~--------~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~lg  182 (277)
T 3iru_A          112 LIPGWKEVFDKLI-AQGIKVGGNTGYG--------PGMMAPALIAAKEQGYTPASTVFATDVVRGRPFPDMALKVALELE  182 (277)
T ss_dssp             BCTTHHHHHHHHH-HTTCEEEEECSSC--------HHHHHHHHHHHHHTTCCCSEEECGGGSSSCTTSSHHHHHHHHHHT
T ss_pred             cCcCHHHHHHHHH-HcCCeEEEEeCCc--------hHHHHHHHHhcCcccCCCceEecHHhcCCCCCCHHHHHHHHHHcC
Confidence            4677888899998 5799999999996        3455566665543     3333    24579998 6799999999


Q ss_pred             CCC-CcEEEEccCCcccHHHHHHcCCeEEEEcCCC
Q 017982          272 CQS-SQLIMVGDRPFTDIVYGNRNGFLTILTEPLS  305 (363)
Q Consensus       272 l~p-ee~vmVGDrL~TDI~~A~raGi~TIlV~p~~  305 (363)
                      ++| ++++||||+. +||.+|+++|+.+|+|..+.
T Consensus       183 i~~~~~~i~vGD~~-~Di~~a~~aG~~~v~v~~g~  216 (277)
T 3iru_A          183 VGHVNGCIKVDDTL-PGIEEGLRAGMWTVGVSCSG  216 (277)
T ss_dssp             CSCGGGEEEEESSH-HHHHHHHHTTCEEEEECSSS
T ss_pred             CCCCccEEEEcCCH-HHHHHHHHCCCeEEEEecCC
Confidence            999 9999999998 89999999999999998664

>3qnm_A Haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0

Probab=99.47  E-value=2.4e-13  Score=119.64  Aligned_cols=95  Identities=16%  Similarity=0.077  Sum_probs=78.9

Q ss_pred             CcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCe----EEE----cccCCCch-hHHHHHHHhC
Q 017982          201 TLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK----VIR----HRVKKPAG-TAEEIEKHFG  271 (363)
Q Consensus       201 ~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~----~I~----~~~kKP~p-~~~~alk~lg  271 (363)
                      .++|++.++|+.|+  .|++++|+||..        ...++.+++.+|+.    .+.    ....||.+ .++.+++++|
T Consensus       107 ~~~~~~~~~l~~l~--~g~~~~i~sn~~--------~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~lg  176 (240)
T 3qnm_A          107 GLMPHAKEVLEYLA--PQYNLYILSNGF--------RELQSRKMRSAGVDRYFKKIILSEDLGVLKPRPEIFHFALSATQ  176 (240)
T ss_dssp             CBSTTHHHHHHHHT--TTSEEEEEECSC--------HHHHHHHHHHHTCGGGCSEEEEGGGTTCCTTSHHHHHHHHHHTT
T ss_pred             CcCccHHHHHHHHH--cCCeEEEEeCCc--------hHHHHHHHHHcChHhhceeEEEeccCCCCCCCHHHHHHHHHHcC
Confidence            45778888888886  589999999985        35667777888874    222    24679998 6799999999


Q ss_pred             CCCCcEEEEccCCcccHHHHHHcCCeEEEEcCCC
Q 017982          272 CQSSQLIMVGDRPFTDIVYGNRNGFLTILTEPLS  305 (363)
Q Consensus       272 l~pee~vmVGDrL~TDI~~A~raGi~TIlV~p~~  305 (363)
                      ++|++++||||++.+||.+|+++|+.+++++...
T Consensus       177 i~~~~~~~iGD~~~~Di~~a~~aG~~~~~~~~~~  210 (240)
T 3qnm_A          177 SELRESLMIGDSWEADITGAHGVGMHQAFYNVTE  210 (240)
T ss_dssp             CCGGGEEEEESCTTTTHHHHHHTTCEEEEECCSC
T ss_pred             CCcccEEEECCCchHhHHHHHHcCCeEEEEcCCC
Confidence            9999999999997689999999999999998665

>4dcc_A Putative haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 1.65A {Bacteroides thetaiotaomicron} PDB: 4dfd_A 4f71_A 4f72_A

Probab=99.46  E-value=1.3e-13  Score=123.08  Aligned_cols=95  Identities=8%  Similarity=0.023  Sum_probs=75.5

Q ss_pred             cchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHH------HHhCCe----EEE----cccCCCch-hHHHH
Q 017982          202 LWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLE------GKIGIK----VIR----HRVKKPAG-TAEEI  266 (363)
Q Consensus       202 ~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~------~~LGi~----~I~----~~~kKP~p-~~~~a  266 (363)
                      ++|++.++|+.|+ +. ++++|+||+.        ...++.+.      +.+|+.    .+.    .+..||++ .++.+
T Consensus       113 ~~~~~~~~l~~l~-~~-~~~~i~Sn~~--------~~~~~~~~~~l~~~~~~~l~~~fd~i~~~~~~~~~KP~~~~~~~~  182 (229)
T 4dcc_A          113 IPTYKLDLLLKLR-EK-YVVYLLSNTN--------DIHWKWVCKNAFPYRTFKVEDYFEKTYLSYEMKMAKPEPEIFKAV  182 (229)
T ss_dssp             CCHHHHHHHHHHT-TT-SEEEEEECCC--------HHHHHHHHHHTSCBTTBCHHHHCSEEEEHHHHTCCTTCHHHHHHH
T ss_pred             ccHHHHHHHHHHH-hc-CcEEEEECCC--------hHHHHHHHhhhhhhccCCHHHhCCEEEeecccCCCCCCHHHHHHH
Confidence            4588899999998 45 8999999996        24444333      445542    232    35689998 57999


Q ss_pred             HHHhCCCCCcEEEEccCCcccHHHHHHcCCeEEEEcCCCCC
Q 017982          267 EKHFGCQSSQLIMVGDRPFTDIVYGNRNGFLTILTEPLSLA  307 (363)
Q Consensus       267 lk~lgl~pee~vmVGDrL~TDI~~A~raGi~TIlV~p~~~~  307 (363)
                      ++++|++|++++||||+. +||.+|+++|+.+|+|.+....
T Consensus       183 ~~~~g~~~~~~~~vGD~~-~Di~~a~~aG~~~i~v~~~~~~  222 (229)
T 4dcc_A          183 TEDAGIDPKETFFIDDSE-INCKVAQELGISTYTPKAGEDW  222 (229)
T ss_dssp             HHHHTCCGGGEEEECSCH-HHHHHHHHTTCEEECCCTTCCG
T ss_pred             HHHcCCCHHHeEEECCCH-HHHHHHHHcCCEEEEECCHHHH
Confidence            999999999999999999 8999999999999999876543

>3ddh_A Putative haloacid dehalogenase-like family hydrol; hydrolase, HAD superfamily, ST genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides thetaiotaomicron}

Probab=99.46  E-value=2.1e-13  Score=118.93  Aligned_cols=94  Identities=15%  Similarity=0.088  Sum_probs=77.7

Q ss_pred             CcchhHHHHHHHHHHhCC-CeEEEEeCCCCCCCCCccHHHHHHHHHHhCCe----EEEcccCCCch-hHHHHHHHhCCCC
Q 017982          201 TLWGPLSSSIEQCKSVFG-HDIAVFSNSAGLYEYDNDASKARKLEGKIGIK----VIRHRVKKPAG-TAEEIEKHFGCQS  274 (363)
Q Consensus       201 ~~~p~v~e~L~~Lk~~~G-ikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~----~I~~~~kKP~p-~~~~alk~lgl~p  274 (363)
                      .++|++.+.|+.|+ +.| ++++|+||..        ...+..+++.+|+.    .+. ...||.+ .+..+++++|++|
T Consensus       105 ~~~~~~~~~l~~l~-~~g~~~~~i~t~~~--------~~~~~~~l~~~~~~~~f~~~~-~~~kpk~~~~~~~~~~lgi~~  174 (234)
T 3ddh_A          105 ELLPGVKETLKTLK-ETGKYKLVVATKGD--------LLDQENKLERSGLSPYFDHIE-VMSDKTEKEYLRLLSILQIAP  174 (234)
T ss_dssp             CBCTTHHHHHHHHH-HHCCCEEEEEEESC--------HHHHHHHHHHHTCGGGCSEEE-EESCCSHHHHHHHHHHHTCCG
T ss_pred             CcCccHHHHHHHHH-hCCCeEEEEEeCCc--------hHHHHHHHHHhCcHhhhheee-ecCCCCHHHHHHHHHHhCCCc
Confidence            35778888899998 568 9999999985        35567777888864    232 3578888 6799999999999


Q ss_pred             CcEEEEccCCcccHHHHHHcCCeEEEEcCC
Q 017982          275 SQLIMVGDRPFTDIVYGNRNGFLTILTEPL  304 (363)
Q Consensus       275 ee~vmVGDrL~TDI~~A~raGi~TIlV~p~  304 (363)
                      ++++||||++.+||.+|+++|+.+++|..+
T Consensus       175 ~~~i~iGD~~~~Di~~a~~aG~~~v~v~~~  204 (234)
T 3ddh_A          175 SELLMVGNSFKSDIQPVLSLGGYGVHIPFE  204 (234)
T ss_dssp             GGEEEEESCCCCCCHHHHHHTCEEEECCCC
T ss_pred             ceEEEECCCcHHHhHHHHHCCCeEEEecCC
Confidence            999999999768999999999999999644

>3n1u_A Hydrolase, HAD superfamily, subfamily III A; structural genomics, PSI-2; 1.80A {Legionella pneumophila} SCOP: c.108.1.0

Probab=99.46  E-value=1.2e-13  Score=123.36  Aligned_cols=107  Identities=15%  Similarity=0.204  Sum_probs=87.1

Q ss_pred             cCCCEEEEcCCceeec---CCCCCcchhHHHH-------HHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCe
Q 017982          181 RGFKGVVFDKDNTLTA---PYSLTLWGPLSSS-------IEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK  250 (363)
Q Consensus       181 ~GIkaVV~DlDnTL~~---~~~~~~~p~v~e~-------L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~  250 (363)
                      .++++++||+|+||+.   +... ..+++.++       |+.|+ +.|++++|+||+.        ...++.+++.+|+.
T Consensus        17 ~~ik~vifD~DGtL~~~~~~~~~-~~~~~~~~~~~d~~~l~~L~-~~g~~~~ivTn~~--------~~~~~~~l~~lgl~   86 (191)
T 3n1u_A           17 KKIKCLICDVDGVLSDGLLHIDN-HGNELKSFHVQDGMGLKLLM-AAGIQVAIITTAQ--------NAVVDHRMEQLGIT   86 (191)
T ss_dssp             HTCSEEEECSTTTTBCSCCEECT-TCCEECCBCHHHHHHHHHHH-HTTCEEEEECSCC--------SHHHHHHHHHHTCC
T ss_pred             hcCCEEEEeCCCCCCCCceeecC-CchhhhhccccChHHHHHHH-HCCCeEEEEeCcC--------hHHHHHHHHHcCCc
Confidence            6899999999999975   1111 11333444       88998 5899999999996        36788899999998


Q ss_pred             EEEcccCCCch-hHHHHHHHhCCCCCcEEEEccCCcccHHHHHHcCCeEE
Q 017982          251 VIRHRVKKPAG-TAEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGFLTI  299 (363)
Q Consensus       251 ~I~~~~kKP~p-~~~~alk~lgl~pee~vmVGDrL~TDI~~A~raGi~TI  299 (363)
                      .++. ..||.+ .+..+++.+|+++++++||||+. +|+.+++++|+.++
T Consensus        87 ~~~~-~~kpk~~~~~~~~~~~~~~~~~~~~vGD~~-~Di~~~~~ag~~~~  134 (191)
T 3n1u_A           87 HYYK-GQVDKRSAYQHLKKTLGLNDDEFAYIGDDL-PDLPLIQQVGLGVA  134 (191)
T ss_dssp             EEEC-SCSSCHHHHHHHHHHHTCCGGGEEEEECSG-GGHHHHHHSSEEEE
T ss_pred             ccee-CCCChHHHHHHHHHHhCCCHHHEEEECCCH-HHHHHHHHCCCEEE
Confidence            7654 348888 57899999999999999999999 89999999998864

>2r8e_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; YRBI, divalent metal, HAD superfamily, KDO 8-P, hydrolase; 1.40A {Escherichia coli O6} PDB: 2r8x_A 2r8y_A 2r8z_A 3hyc_A 3i6b_A*

Probab=99.45  E-value=4.5e-13  Score=118.61  Aligned_cols=113  Identities=11%  Similarity=0.127  Sum_probs=89.2

Q ss_pred             HHcCCCEEEEcCCceeecCC-----CCC----cchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCC
Q 017982          179 QRRGFKGVVFDKDNTLTAPY-----SLT----LWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGI  249 (363)
Q Consensus       179 ~~~GIkaVV~DlDnTL~~~~-----~~~----~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi  249 (363)
                      +..++++++||+|+||+...     ...    ....-..+|+.|+ +.|++++|+||+..        ..++.+++.+|+
T Consensus        22 ~~~~ik~vifD~DGTL~~~~~~~~~~~~~~~~~~~~d~~~l~~L~-~~g~~v~ivT~~~~--------~~~~~~l~~lgl   92 (188)
T 2r8e_A           22 KAENIRLLILDVDGVLSDGLIYMGNNGEELKAFNVRDGYGIRCAL-TSDIEVAIITGRKA--------KLVEDRCATLGI   92 (188)
T ss_dssp             HHHTCSEEEECCCCCCBCSEEEEETTSCEEEEEEHHHHHHHHHHH-TTTCEEEEECSSCC--------HHHHHHHHHHTC
T ss_pred             HHhcCCEEEEeCCCCcCCCCEEecCCCcEEEEeecccHHHHHHHH-HCCCeEEEEeCCCh--------HHHHHHHHHcCC
Confidence            35689999999999998511     111    1111223688888 57999999999963        678888899999


Q ss_pred             eEEEcccCCCch-hHHHHHHHhCCCCCcEEEEccCCcccHHHHHHcCCeEEEEc
Q 017982          250 KVIRHRVKKPAG-TAEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGFLTILTE  302 (363)
Q Consensus       250 ~~I~~~~kKP~p-~~~~alk~lgl~pee~vmVGDrL~TDI~~A~raGi~TIlV~  302 (363)
                      ..++ ...||.+ .+..+++++|+++++++||||+. +|+.+|+++|+.+++..
T Consensus        93 ~~~~-~~~kpk~~~~~~~~~~~g~~~~~~~~iGD~~-~Di~~a~~ag~~~~~~~  144 (188)
T 2r8e_A           93 THLY-QGQSNKLIAFSDLLEKLAIAPENVAYVGDDL-IDWPVMEKVGLSVAVAD  144 (188)
T ss_dssp             CEEE-CSCSCSHHHHHHHHHHHTCCGGGEEEEESSG-GGHHHHTTSSEEEECTT
T ss_pred             ceee-cCCCCCHHHHHHHHHHcCCCHHHEEEECCCH-HHHHHHHHCCCEEEecC
Confidence            8665 3568888 57899999999999999999999 89999999999876543

>3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV}

Probab=99.45  E-value=1.4e-13  Score=121.01  Aligned_cols=95  Identities=12%  Similarity=0.020  Sum_probs=79.5

Q ss_pred             CcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCe----EEE----cccCCCch-hHHHHHHHhC
Q 017982          201 TLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK----VIR----HRVKKPAG-TAEEIEKHFG  271 (363)
Q Consensus       201 ~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~----~I~----~~~kKP~p-~~~~alk~lg  271 (363)
                      .++|++.+.|+.|+ +.|++++|+||..        ...++.+++.+|+.    .+.    ....||.+ .+..+++++|
T Consensus        91 ~~~~~~~~~l~~l~-~~g~~~~i~s~~~--------~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~l~  161 (233)
T 3s6j_A           91 IALPGAVELLETLD-KENLKWCIATSGG--------IDTATINLKALKLDINKINIVTRDDVSYGKPDPDLFLAAAKKIG  161 (233)
T ss_dssp             EECTTHHHHHHHHH-HTTCCEEEECSSC--------HHHHHHHHHTTTCCTTSSCEECGGGSSCCTTSTHHHHHHHHHTT
T ss_pred             ccCCCHHHHHHHHH-HCCCeEEEEeCCc--------hhhHHHHHHhcchhhhhheeeccccCCCCCCChHHHHHHHHHhC
Confidence            34678888899998 5799999999996        35677888888875    222    24579988 6799999999


Q ss_pred             CCCCcEEEEccCCcccHHHHHHcCCeEEEEcCCC
Q 017982          272 CQSSQLIMVGDRPFTDIVYGNRNGFLTILTEPLS  305 (363)
Q Consensus       272 l~pee~vmVGDrL~TDI~~A~raGi~TIlV~p~~  305 (363)
                      ++|++++||||+. +||.+|+.+|+.+|+|..+.
T Consensus       162 ~~~~~~i~iGD~~-~Di~~a~~aG~~~i~v~~g~  194 (233)
T 3s6j_A          162 APIDECLVIGDAI-WDMLAARRCKATGVGLLSGG  194 (233)
T ss_dssp             CCGGGEEEEESSH-HHHHHHHHTTCEEEEEGGGS
T ss_pred             CCHHHEEEEeCCH-HhHHHHHHCCCEEEEEeCCC
Confidence            9999999999999 89999999999999998653

>3vay_A HAD-superfamily hydrolase; rossmann fold, haloacid dehalogenase; 1.98A {Pseudomonas syringae PV}

Probab=99.45  E-value=4.5e-13  Score=117.99  Aligned_cols=90  Identities=19%  Similarity=0.279  Sum_probs=73.0

Q ss_pred             cchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCe----EEE----cccCCCch-hHHHHHHHhCC
Q 017982          202 LWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK----VIR----HRVKKPAG-TAEEIEKHFGC  272 (363)
Q Consensus       202 ~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~----~I~----~~~kKP~p-~~~~alk~lgl  272 (363)
                      ++|++.++|+.|++ . ++++|+||....             ++.+|+.    .+.    .+..||.+ .+..+++++|+
T Consensus       106 ~~~~~~~~l~~l~~-~-~~~~i~t~~~~~-------------l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~  170 (230)
T 3vay_A          106 IFPEVQPTLEILAK-T-FTLGVITNGNAD-------------VRRLGLADYFAFALCAEDLGIGKPDPAPFLEALRRAKV  170 (230)
T ss_dssp             BCTTHHHHHHHHHT-T-SEEEEEESSCCC-------------GGGSTTGGGCSEEEEHHHHTCCTTSHHHHHHHHHHHTC
T ss_pred             cCcCHHHHHHHHHh-C-CeEEEEECCchh-------------hhhcCcHHHeeeeEEccccCCCCcCHHHHHHHHHHhCC
Confidence            67888999999984 4 899999999631             3445553    232    34679998 57999999999


Q ss_pred             CCCcEEEEccCCcccHHHHHHcCCeEEEEcCCCC
Q 017982          273 QSSQLIMVGDRPFTDIVYGNRNGFLTILTEPLSL  306 (363)
Q Consensus       273 ~pee~vmVGDrL~TDI~~A~raGi~TIlV~p~~~  306 (363)
                      +|++++||||++.+||.+|+++|+.+++|.++..
T Consensus       171 ~~~~~~~vGD~~~~Di~~a~~aG~~~~~v~~~~~  204 (230)
T 3vay_A          171 DASAAVHVGDHPSDDIAGAQQAGMRAIWYNPQGK  204 (230)
T ss_dssp             CGGGEEEEESCTTTTHHHHHHTTCEEEEECTTCC
T ss_pred             CchheEEEeCChHHHHHHHHHCCCEEEEEcCCCC
Confidence            9999999999986899999999999999986554

>3n07_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; structural genomics, phosphatase, PSI-2, protein structure initiative; HET: MSE; 1.76A {Vibrio cholerae}

Probab=99.45  E-value=1.1e-13  Score=124.83  Aligned_cols=108  Identities=14%  Similarity=0.129  Sum_probs=87.2

Q ss_pred             HcCCCEEEEcCCceeec---CCCCCcchhHHH-------HHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCC
Q 017982          180 RRGFKGVVFDKDNTLTA---PYSLTLWGPLSS-------SIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGI  249 (363)
Q Consensus       180 ~~GIkaVV~DlDnTL~~---~~~~~~~p~v~e-------~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi  249 (363)
                      ..++++|+||+|+||+.   +... ..+++.+       .|+.|+ +.|++++|+||+.        ...++.+++.+|+
T Consensus        22 ~~~ik~vifD~DGtL~d~~~~~~~-~~~~~~~~~~~d~~~l~~L~-~~G~~~~ivT~~~--------~~~~~~~l~~lgi   91 (195)
T 3n07_A           22 AKQIKLLICDVDGVFSDGLIYMGN-QGEELKTFHTRDGYGVKALM-NAGIEIAIITGRR--------SQIVENRMKALGI   91 (195)
T ss_dssp             HHTCCEEEECSTTTTSCSCCEECT-TSCEECCCCTTHHHHHHHHH-HTTCEEEEECSSC--------CHHHHHHHHHTTC
T ss_pred             HhCCCEEEEcCCCCcCCCcEEEcc-CchhhheeecccHHHHHHHH-HCCCEEEEEECcC--------HHHHHHHHHHcCC
Confidence            46899999999999975   1111 1123333       389998 6899999999996        3678899999999


Q ss_pred             eEEEcccCCCch-hHHHHHHHhCCCCCcEEEEccCCcccHHHHHHcCCeEE
Q 017982          250 KVIRHRVKKPAG-TAEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGFLTI  299 (363)
Q Consensus       250 ~~I~~~~kKP~p-~~~~alk~lgl~pee~vmVGDrL~TDI~~A~raGi~TI  299 (363)
                      ..++. ..||.+ .+..+++++|+++++++||||+. +|+.+++++|+..+
T Consensus        92 ~~~~~-~~k~k~~~~~~~~~~~~~~~~~~~~vGD~~-nDi~~~~~ag~~va  140 (195)
T 3n07_A           92 SLIYQ-GQDDKVQAYYDICQKLAIAPEQTGYIGDDL-IDWPVMEKVALRVC  140 (195)
T ss_dssp             CEEEC-SCSSHHHHHHHHHHHHCCCGGGEEEEESSG-GGHHHHTTSSEEEE
T ss_pred             cEEee-CCCCcHHHHHHHHHHhCCCHHHEEEEcCCH-HHHHHHHHCCCEEE
Confidence            97754 458888 57899999999999999999999 89999999997644

>1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A*

Probab=99.43  E-value=4.5e-13  Score=117.67  Aligned_cols=109  Identities=20%  Similarity=0.139  Sum_probs=90.6

Q ss_pred             CCCEEEEcCCceeecCCC----C-----CcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCeEE
Q 017982          182 GFKGVVFDKDNTLTAPYS----L-----TLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKVI  252 (363)
Q Consensus       182 GIkaVV~DlDnTL~~~~~----~-----~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~~I  252 (363)
                      .+++++||+|+||.....    .     .+.++..++|++|+ +.|++++|+||...        ..++.+++.+|+..+
T Consensus         7 ~ik~i~~DlDGTL~~~~~~~~~~~~~~~~~~~~~~~~l~~L~-~~G~~~~i~Tg~~~--------~~~~~~~~~lgl~~~   77 (180)
T 1k1e_A            7 NIKFVITDVDGVLTDGQLHYDANGEAIKSFHVRDGLGIKMLM-DADIQVAVLSGRDS--------PILRRRIADLGIKLF   77 (180)
T ss_dssp             GCCEEEEECTTTTSCSEEEEETTEEEEEEEEHHHHHHHHHHH-HTTCEEEEEESCCC--------HHHHHHHHHHTCCEE
T ss_pred             CCeEEEEeCCCCcCCCCeeeccCcceeeeeccchHHHHHHHH-HCCCeEEEEeCCCc--------HHHHHHHHHcCCcee
Confidence            589999999999975211    0     24567889999998 57999999999962        677888999999865


Q ss_pred             EcccCCCch-hHHHHHHHhCCCCCcEEEEccCCcccHHHHHHcCCeEEEE
Q 017982          253 RHRVKKPAG-TAEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGFLTILT  301 (363)
Q Consensus       253 ~~~~kKP~p-~~~~alk~lgl~pee~vmVGDrL~TDI~~A~raGi~TIlV  301 (363)
                      + ...||.+ .+..+++++|+++++++||||+. +|+.+++.+|+.++..
T Consensus        78 ~-~~~k~k~~~~~~~~~~~~~~~~~~~~vGD~~-~Di~~~~~ag~~~~~~  125 (180)
T 1k1e_A           78 F-LGKLEKETACFDLMKQAGVTAEQTAYIGDDS-VDLPAFAACGTSFAVA  125 (180)
T ss_dssp             E-ESCSCHHHHHHHHHHHHTCCGGGEEEEECSG-GGHHHHHHSSEEEECT
T ss_pred             e-cCCCCcHHHHHHHHHHcCCCHHHEEEECCCH-HHHHHHHHcCCeEEeC
Confidence            4 3468887 56889999999999999999999 8999999999987754

>2w43_A Hypothetical 2-haloalkanoic acid dehalogenase; hydrolase, metabolic process; HET: MES; 1.66A {Sulfolobus tokodaii} PDB: 2w11_A

Probab=99.43  E-value=5.1e-13  Score=116.61  Aligned_cols=91  Identities=12%  Similarity=0.220  Sum_probs=74.4

Q ss_pred             CcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCe----EEE----cccCCCch-hHHHHHHHhC
Q 017982          201 TLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK----VIR----HRVKKPAG-TAEEIEKHFG  271 (363)
Q Consensus       201 ~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~----~I~----~~~kKP~p-~~~~alk~lg  271 (363)
                      .++|++.+ |+.|++ . ++++|+||+.        ...++.+++.+|+.    .+.    ....||.+ .+..+++++|
T Consensus        74 ~~~~~~~~-l~~l~~-~-~~~~i~t~~~--------~~~~~~~l~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~  142 (201)
T 2w43_A           74 KAYEDTKY-LKEISE-I-AEVYALSNGS--------INEVKQHLERNGLLRYFKGIFSAESVKEYKPSPKVYKYFLDSIG  142 (201)
T ss_dssp             EECGGGGG-HHHHHH-H-SEEEEEESSC--------HHHHHHHHHHTTCGGGCSEEEEGGGGTCCTTCHHHHHHHHHHHT
T ss_pred             ccCCChHH-HHHHHh-C-CeEEEEeCcC--------HHHHHHHHHHCCcHHhCcEEEehhhcCCCCCCHHHHHHHHHhcC
Confidence            34678888 999984 5 8999999996        35677788888874    232    24579998 5789999999


Q ss_pred             CCCCcEEEEccCCcccHHHHHHcCCeEEEEcCCC
Q 017982          272 CQSSQLIMVGDRPFTDIVYGNRNGFLTILTEPLS  305 (363)
Q Consensus       272 l~pee~vmVGDrL~TDI~~A~raGi~TIlV~p~~  305 (363)
                        |++++||||+. .||.+|+++|+.+++|..+.
T Consensus       143 --~~~~~~vGD~~-~Di~~a~~aG~~~~~~~~~~  173 (201)
T 2w43_A          143 --AKEAFLVSSNA-FDVIGAKNAGMRSIFVNRKN  173 (201)
T ss_dssp             --CSCCEEEESCH-HHHHHHHHTTCEEEEECSSS
T ss_pred             --CCcEEEEeCCH-HHhHHHHHCCCEEEEECCCC
Confidence              99999999999 69999999999999998643

>1qq5_A Protein (L-2-haloacid dehalogenase); hydrolase; 1.52A {Xanthobacter autotrophicus} SCOP: c.108.1.1 PDB: 1qq6_A* 1qq7_A* 1aq6_A

Probab=99.43  E-value=4.6e-13  Score=121.49  Aligned_cols=91  Identities=19%  Similarity=0.256  Sum_probs=76.5

Q ss_pred             CcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCe----EEE----cccCCCch-hHHHHHHHhC
Q 017982          201 TLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK----VIR----HRVKKPAG-TAEEIEKHFG  271 (363)
Q Consensus       201 ~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~----~I~----~~~kKP~p-~~~~alk~lg  271 (363)
                      .++|++.++|+.|+   |++++|+||+.        ...++.+++.+|+.    .+.    ....||.+ .+..+++++|
T Consensus        93 ~~~~~~~~~l~~l~---g~~~~i~t~~~--------~~~~~~~l~~~gl~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~  161 (253)
T 1qq5_A           93 TPYPDAAQCLAELA---PLKRAILSNGA--------PDMLQALVANAGLTDSFDAVISVDAKRVFKPHPDSYALVEEVLG  161 (253)
T ss_dssp             CBCTTHHHHHHHHT---TSEEEEEESSC--------HHHHHHHHHHTTCGGGCSEEEEGGGGTCCTTSHHHHHHHHHHHC
T ss_pred             CCCccHHHHHHHHc---CCCEEEEeCcC--------HHHHHHHHHHCCchhhccEEEEccccCCCCCCHHHHHHHHHHcC
Confidence            45688888888875   89999999996        35667788888875    222    24679998 5789999999


Q ss_pred             CCCCcEEEEccCCcccHHHHHHcCCeEEEEcC
Q 017982          272 CQSSQLIMVGDRPFTDIVYGNRNGFLTILTEP  303 (363)
Q Consensus       272 l~pee~vmVGDrL~TDI~~A~raGi~TIlV~p  303 (363)
                      ++|++++||||+. +||.+|+++|+.++++..
T Consensus       162 ~~~~~~~~vGD~~-~Di~~a~~aG~~~~~~~~  192 (253)
T 1qq5_A          162 VTPAEVLFVSSNG-FDVGGAKNFGFSVARVAR  192 (253)
T ss_dssp             CCGGGEEEEESCH-HHHHHHHHHTCEEEEECC
T ss_pred             CCHHHEEEEeCCh-hhHHHHHHCCCEEEEECC
Confidence            9999999999997 899999999999999986

>4eek_A Beta-phosphoglucomutase-related protein; hydrolase, magnesium binding site, enzyme function initiativ; 1.60A {Deinococcus radiodurans} PDB: 4eel_A* 4een_A

Probab=99.43  E-value=7.2e-13  Score=119.84  Aligned_cols=94  Identities=15%  Similarity=0.045  Sum_probs=78.9

Q ss_pred             cchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCe----E-EE----cc-cCCCch-hHHHHHHHh
Q 017982          202 LWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK----V-IR----HR-VKKPAG-TAEEIEKHF  270 (363)
Q Consensus       202 ~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~----~-I~----~~-~kKP~p-~~~~alk~l  270 (363)
                      ++|++.++|+.|+ +.|++++|+||..        ...++.+++.+|+.    . +.    .. ..||.+ .+..+++++
T Consensus       111 ~~~~~~~~l~~l~-~~g~~~~i~s~~~--------~~~~~~~l~~~~l~~~f~~~i~~~~~~~~~~Kp~~~~~~~~~~~l  181 (259)
T 4eek_A          111 AIEGAAETLRALR-AAGVPFAIGSNSE--------RGRLHLKLRVAGLTELAGEHIYDPSWVGGRGKPHPDLYTFAAQQL  181 (259)
T ss_dssp             ECTTHHHHHHHHH-HHTCCEEEECSSC--------HHHHHHHHHHTTCHHHHCSCEECGGGGTTCCTTSSHHHHHHHHHT
T ss_pred             cCccHHHHHHHHH-HCCCeEEEEeCCC--------HHHHHHHHHhcChHhhccceEEeHhhcCcCCCCChHHHHHHHHHc
Confidence            4677888899998 5699999999996        35677778888874    2 32    24 789998 579999999


Q ss_pred             CCCCCcEEEEccCCcccHHHHHHcCCeEEEEcCCC
Q 017982          271 GCQSSQLIMVGDRPFTDIVYGNRNGFLTILTEPLS  305 (363)
Q Consensus       271 gl~pee~vmVGDrL~TDI~~A~raGi~TIlV~p~~  305 (363)
                      |++|++++||||+. +||.+|+++|+.+|+|..+.
T Consensus       182 gi~~~~~i~iGD~~-~Di~~a~~aG~~~i~v~~g~  215 (259)
T 4eek_A          182 GILPERCVVIEDSV-TGGAAGLAAGATLWGLLVPG  215 (259)
T ss_dssp             TCCGGGEEEEESSH-HHHHHHHHHTCEEEEECCTT
T ss_pred             CCCHHHEEEEcCCH-HHHHHHHHCCCEEEEEccCC
Confidence            99999999999999 89999999999999998664

>3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A*

Probab=99.43  E-value=2.4e-13  Score=132.89  Aligned_cols=99  Identities=13%  Similarity=0.152  Sum_probs=73.0

Q ss_pred             cchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhC--CeEEE----cccCCCch-hHHHHHHHhCCCC
Q 017982          202 LWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIG--IKVIR----HRVKKPAG-TAEEIEKHFGCQS  274 (363)
Q Consensus       202 ~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LG--i~~I~----~~~kKP~p-~~~~alk~lgl~p  274 (363)
                      ++|++.+.|+.|+ +.|++++|+||+....  ......+......+.  .+.+.    .+..||++ .|..+++++|++|
T Consensus       101 ~~~~~~~~L~~L~-~~g~~~~i~Tn~~~~~--~~~~~~~~~~~~~l~~~fd~i~~~~~~~~~KP~p~~~~~~~~~lg~~p  177 (555)
T 3i28_A          101 INRPMLQAALMLR-KKGFTTAILTNTWLDD--RAERDGLAQLMCELKMHFDFLIESCQVGMVKPEPQIYKFLLDTLKASP  177 (555)
T ss_dssp             ECHHHHHHHHHHH-HTTCEEEEEECCCCCC--STTHHHHHHHHHHHHTTSSEEEEHHHHTCCTTCHHHHHHHHHHHTCCG
T ss_pred             cChhHHHHHHHHH-HCCCEEEEEeCCCccc--cchhhHHHHHhhhhhhheeEEEeccccCCCCCCHHHHHHHHHHcCCCh
Confidence            4678888999998 5799999999982100  001222332222222  23332    35689999 6799999999999


Q ss_pred             CcEEEEccCCcccHHHHHHcCCeEEEEcCC
Q 017982          275 SQLIMVGDRPFTDIVYGNRNGFLTILTEPL  304 (363)
Q Consensus       275 ee~vmVGDrL~TDI~~A~raGi~TIlV~p~  304 (363)
                      ++|+||||+. +||.+|+++||.+|++.+.
T Consensus       178 ~~~~~v~D~~-~di~~a~~aG~~~~~~~~~  206 (555)
T 3i28_A          178 SEVVFLDDIG-ANLKPARDLGMVTILVQDT  206 (555)
T ss_dssp             GGEEEEESCH-HHHHHHHHHTCEEEECSSH
T ss_pred             hHEEEECCcH-HHHHHHHHcCCEEEEECCC
Confidence            9999999998 7999999999999999753

>2b82_A APHA, class B acid phosphatase; DDDD acid phosphatase, metallo-ENZ hydrolase; HET: ADN; 1.25A {Escherichia coli} SCOP: c.108.1.12 PDB: 2b8j_A* 2hf7_A 1rmt_A* 1n9k_A 1rmq_A 1n8n_A* 1rmy_A* 2g1a_A* 3cz4_A 2heg_A* 1z5g_A 1z5u_A* 1z88_A 2aut_A

Probab=99.42  E-value=6.8e-14  Score=127.18  Aligned_cols=119  Identities=19%  Similarity=0.103  Sum_probs=86.6

Q ss_pred             HHHcCCCEEEEcCCceeecCCC---------------------------------CCcchhHHHHHHHHHHhCCCeEEEE
Q 017982          178 LQRRGFKGVVFDKDNTLTAPYS---------------------------------LTLWGPLSSSIEQCKSVFGHDIAVF  224 (363)
Q Consensus       178 L~~~GIkaVV~DlDnTL~~~~~---------------------------------~~~~p~v~e~L~~Lk~~~Gikl~IV  224 (363)
                      +....+++|+||+|+||.....                                 ....|++.++|+.|+ +.|++++|+
T Consensus        32 ~~~~~~kaviFDlDGTL~Ds~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~L~-~~G~~l~iv  110 (211)
T 2b82_A           32 LAGRPPMAVGFDIDDTVLFSSPGFWRGKKTFSPESEDYLKNPVFWEKMNNGWDEFSIPKEVARQLIDMHV-RRGDAIFFV  110 (211)
T ss_dssp             TTTCCCCEEEECCBTTTEECHHHHHHHHHHHCTTSSGGGGCHHHHHHHHTTGGGGCEECHHHHHHHHHHH-HHTCEEEEE
T ss_pred             cccCCCCEEEEcCCCCCCcCcHHHHHHHHHhhHHHHHHhhhHHHHHHHHHhHHhcCCCcHHHHHHHHHHH-HCCCEEEEE
Confidence            3344699999999999986210                                 013568999999998 579999999


Q ss_pred             eCCCCCCCCCccHHHHHHHHHHhCCe-----EEEcccCCCch-hHHHHHHHhCCCCCcEEEEccCCcccHHHHHHcCCeE
Q 017982          225 SNSAGLYEYDNDASKARKLEGKIGIK-----VIRHRVKKPAG-TAEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGFLT  298 (363)
Q Consensus       225 SN~~g~~~~dp~~~~a~~i~~~LGi~-----~I~~~~kKP~p-~~~~alk~lgl~pee~vmVGDrL~TDI~~A~raGi~T  298 (363)
                      ||+.....    ....+.+...++..     .+.....||++ .+..+++++|+    ++||||+. +||.+|+++||.+
T Consensus       111 Tn~~~~~~----~~~l~~l~~~f~~i~~~~~~~~~~~~KP~p~~~~~~~~~~g~----~l~VGDs~-~Di~aA~~aG~~~  181 (211)
T 2b82_A          111 TGRSPTKT----ETVSKTLADNFHIPATNMNPVIFAGDKPGQNTKSQWLQDKNI----RIFYGDSD-NDITAARDVGARG  181 (211)
T ss_dssp             ECSCCCSS----CCHHHHHHHHTTCCTTTBCCCEECCCCTTCCCSHHHHHHTTE----EEEEESSH-HHHHHHHHTTCEE
T ss_pred             cCCcHHHH----HHHHHHHHHhcCccccccchhhhcCCCCCHHHHHHHHHHCCC----EEEEECCH-HHHHHHHHCCCeE
Confidence            99974211    12222344444432     11123579998 57899999998    99999999 8999999999999


Q ss_pred             EEEcCCCC
Q 017982          299 ILTEPLSL  306 (363)
Q Consensus       299 IlV~p~~~  306 (363)
                      |+|..+..
T Consensus       182 i~v~~g~~  189 (211)
T 2b82_A          182 IRILRASN  189 (211)
T ss_dssp             EECCCCTT
T ss_pred             EEEecCCC
Confidence            99986543

>2ho4_A Haloacid dehalogenase-like hydrolase domain containing 2; HDHD2, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; 2.20A {Mus musculus} PDB: 3hlt_A

Probab=99.41  E-value=2.7e-12  Score=115.83  Aligned_cols=50  Identities=26%  Similarity=0.327  Sum_probs=45.6

Q ss_pred             cCCCch-hHHHHHHHhCCCCCcEEEEccCCcccHHHHHHcCCeEEEEcCCC
Q 017982          256 VKKPAG-TAEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGFLTILTEPLS  305 (363)
Q Consensus       256 ~kKP~p-~~~~alk~lgl~pee~vmVGDrL~TDI~~A~raGi~TIlV~p~~  305 (363)
                      .+||.+ .+..+++++|++|++++||||++.+||.+|+++|+.+|+|..+.
T Consensus       177 ~~Kp~~~~~~~~~~~lgi~~~~~~~iGD~~~~Di~~a~~aG~~~i~v~~g~  227 (259)
T 2ho4_A          177 VGKPEKTFFLEALRDADCAPEEAVMIGDDCRDDVDGAQNIGMLGILVKTGK  227 (259)
T ss_dssp             CSTTSHHHHHHHGGGGTCCGGGEEEEESCTTTTHHHHHHTTCEEEEESSTT
T ss_pred             ecCCCHHHHHHHHHHcCCChHHEEEECCCcHHHHHHHHHCCCcEEEECCCC
Confidence            379998 57899999999999999999998789999999999999998763

>2b0c_A Putative phosphatase; alpha-D-glucose-1-phosphate, structural genomic protein structure initiative, midwest center for structural genomics, MCSG; HET: G1P; 2.00A {Escherichia coli} SCOP: c.108.1.2

Probab=99.40  E-value=1.3e-13  Score=119.79  Aligned_cols=99  Identities=18%  Similarity=0.238  Sum_probs=72.8

Q ss_pred             cchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCeEEE----cccCCCch-hHHHHHHHhCCCCCc
Q 017982          202 LWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKVIR----HRVKKPAG-TAEEIEKHFGCQSSQ  276 (363)
Q Consensus       202 ~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~~I~----~~~kKP~p-~~~~alk~lgl~pee  276 (363)
                      ++|++.++|+.|+ +.|++++|+||+..... .........+...+  +.+.    .+..||.+ .+..+++++|+++++
T Consensus        92 ~~~~~~~~l~~l~-~~g~~~~i~t~~~~~~~-~~~~~~~~~l~~~f--~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~  167 (206)
T 2b0c_A           92 LRPEVIAIMHKLR-EQGHRVVVLSNTNRLHT-TFWPEEYPEIRDAA--DHIYLSQDLGMRKPEARIYQHVLQAEGFSPSD  167 (206)
T ss_dssp             ECHHHHHHHHHHH-HTTCEEEEEECCCCCTT-SCCGGGCHHHHHHC--SEEEEHHHHTCCTTCHHHHHHHHHHHTCCGGG
T ss_pred             cCccHHHHHHHHH-HCCCeEEEEECCChHHH-HHHHHhccChhhhe--eeEEEecccCCCCCCHHHHHHHHHHcCCCHHH
Confidence            5689999999998 57999999999864221 00000101222222  2232    24679998 578999999999999


Q ss_pred             EEEEccCCcccHHHHHHcCCeEEEEcCCC
Q 017982          277 LIMVGDRPFTDIVYGNRNGFLTILTEPLS  305 (363)
Q Consensus       277 ~vmVGDrL~TDI~~A~raGi~TIlV~p~~  305 (363)
                      ++||||+. .||.+|+++|+.+++|....
T Consensus       168 ~~~vgD~~-~Di~~a~~aG~~~~~~~~~~  195 (206)
T 2b0c_A          168 TVFFDDNA-DNIEGANQLGITSILVKDKT  195 (206)
T ss_dssp             EEEEESCH-HHHHHHHTTTCEEEECCSTT
T ss_pred             eEEeCCCH-HHHHHHHHcCCeEEEecCCc
Confidence            99999998 79999999999999997653

>3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile}

Probab=99.40  E-value=9.6e-13  Score=117.42  Aligned_cols=96  Identities=17%  Similarity=0.146  Sum_probs=80.1

Q ss_pred             cchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCe----EEE----cccCCCch-hHHHHHHHhCC
Q 017982          202 LWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK----VIR----HRVKKPAG-TAEEIEKHFGC  272 (363)
Q Consensus       202 ~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~----~I~----~~~kKP~p-~~~~alk~lgl  272 (363)
                      ++|++.++|+.|+ +.|++++|+||..        ...++.+++.+|+.    .+.    ....||.+ .+..+++++|+
T Consensus       111 ~~~~~~~~l~~l~-~~g~~~~i~s~~~--------~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~g~  181 (240)
T 3sd7_A          111 IYENMKEILEMLY-KNGKILLVATSKP--------TVFAETILRYFDIDRYFKYIAGSNLDGTRVNKNEVIQYVLDLCNV  181 (240)
T ss_dssp             ECTTHHHHHHHHH-HTTCEEEEEEEEE--------HHHHHHHHHHTTCGGGCSEEEEECTTSCCCCHHHHHHHHHHHHTC
T ss_pred             cCccHHHHHHHHH-HCCCeEEEEeCCc--------HHHHHHHHHHcCcHhhEEEEEeccccCCCCCCHHHHHHHHHHcCC
Confidence            5677888999998 5799999999985        36677888888874    222    24578998 57999999999


Q ss_pred             C-CCcEEEEccCCcccHHHHHHcCCeEEEEcCCCCC
Q 017982          273 Q-SSQLIMVGDRPFTDIVYGNRNGFLTILTEPLSLA  307 (363)
Q Consensus       273 ~-pee~vmVGDrL~TDI~~A~raGi~TIlV~p~~~~  307 (363)
                      + ++++++|||+. +||.+|+++|+.+|+|..+...
T Consensus       182 ~~~~~~i~vGD~~-~Di~~a~~aG~~~i~v~~g~~~  216 (240)
T 3sd7_A          182 KDKDKVIMVGDRK-YDIIGAKKIGIDSIGVLYGYGS  216 (240)
T ss_dssp             CCGGGEEEEESSH-HHHHHHHHHTCEEEEESSSSCC
T ss_pred             CCCCcEEEECCCH-HHHHHHHHCCCCEEEEeCCCCC
Confidence            9 99999999998 9999999999999999865533

>3epr_A Hydrolase, haloacid dehalogenase-like family; structural genomics, unknown function, HAD superfamily hydro PSI-2; 1.55A {Streptococcus agalactiae serogroup V} SCOP: c.108.1.14 PDB: 1ys9_A 1wvi_A 1ydf_A

Probab=99.40  E-value=1.5e-12  Score=120.00  Aligned_cols=52  Identities=27%  Similarity=0.327  Sum_probs=47.0

Q ss_pred             cCCCch-hHHHHHHHhCCCCCcEEEEccCCcccHHHHHHcCCeEEEEcCCCCC
Q 017982          256 VKKPAG-TAEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGFLTILTEPLSLA  307 (363)
Q Consensus       256 ~kKP~p-~~~~alk~lgl~pee~vmVGDrL~TDI~~A~raGi~TIlV~p~~~~  307 (363)
                      .+||.+ .++.+++++|+++++++||||++.+||.+|+++|+.+|||..+...
T Consensus       180 ~~Kp~~~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~aG~~~~~v~~g~~~  232 (264)
T 3epr_A          180 IGKPNAIIMNKALEILNIPRNQAVMVGDNYLTDIMAGINNDIDTLLVTTGFTT  232 (264)
T ss_dssp             CSTTSHHHHHHHHHHHTSCGGGEEEEESCTTTHHHHHHHHTCEEEEETTSSSC
T ss_pred             CCCCCHHHHHHHHHHhCcCcccEEEECCCcHHHHHHHHHCCCeEEEECCCCCC
Confidence            579998 5789999999999999999999769999999999999999876654

>3umg_A Haloacid dehalogenase; defluorinase, hydrolase; 2.25A {Rhodococcus jostii}

Probab=99.39  E-value=9.9e-13  Score=116.67  Aligned_cols=91  Identities=18%  Similarity=0.210  Sum_probs=76.2

Q ss_pred             cchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCeE--EE----cccCCCch-hHHHHHHHhCCCC
Q 017982          202 LWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKV--IR----HRVKKPAG-TAEEIEKHFGCQS  274 (363)
Q Consensus       202 ~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~~--I~----~~~kKP~p-~~~~alk~lgl~p  274 (363)
                      ++|++.+.|+.|++ . ++++|+||..        ...++.+++.+|+.+  +.    ....||.+ .+..+++++|++|
T Consensus       117 ~~~~~~~~l~~l~~-~-~~~~i~t~~~--------~~~~~~~l~~~~~~f~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~  186 (254)
T 3umg_A          117 PWPDSVPGLTAIKA-E-YIIGPLSNGN--------TSLLLDMAKNAGIPWDVIIGSDINRKYKPDPQAYLRTAQVLGLHP  186 (254)
T ss_dssp             BCTTHHHHHHHHHH-H-SEEEECSSSC--------HHHHHHHHHHHTCCCSCCCCHHHHTCCTTSHHHHHHHHHHTTCCG
T ss_pred             CCcCHHHHHHHHHh-C-CeEEEEeCCC--------HHHHHHHHHhCCCCeeEEEEcCcCCCCCCCHHHHHHHHHHcCCCh
Confidence            46788889999984 3 7999999996        356777888888752  21    24689998 6799999999999


Q ss_pred             CcEEEEccCCcccHHHHHHcCCeEEEEcC
Q 017982          275 SQLIMVGDRPFTDIVYGNRNGFLTILTEP  303 (363)
Q Consensus       275 ee~vmVGDrL~TDI~~A~raGi~TIlV~p  303 (363)
                      ++++||||+. +||.+|+.+|+.+++|..
T Consensus       187 ~~~~~iGD~~-~Di~~a~~aG~~~~~~~~  214 (254)
T 3umg_A          187 GEVMLAAAHN-GDLEAAHATGLATAFILR  214 (254)
T ss_dssp             GGEEEEESCH-HHHHHHHHTTCEEEEECC
T ss_pred             HHEEEEeCCh-HhHHHHHHCCCEEEEEec
Confidence            9999999997 899999999999999983

>1vjr_A 4-nitrophenylphosphatase; TM1742, structural genomics, JCSG, protein structure initiative, joint center for structural G hydrolase; 2.40A {Thermotoga maritima} SCOP: c.108.1.14 PDB: 1pw5_A*

Probab=99.38  E-value=2.2e-12  Score=118.09  Aligned_cols=52  Identities=31%  Similarity=0.551  Sum_probs=46.0

Q ss_pred             cCCCch-hHHHHHHHhCCCCCcEEEEccCCcccHHHHHHcCCeEEEEcCCCCC
Q 017982          256 VKKPAG-TAEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGFLTILTEPLSLA  307 (363)
Q Consensus       256 ~kKP~p-~~~~alk~lgl~pee~vmVGDrL~TDI~~A~raGi~TIlV~p~~~~  307 (363)
                      .+||.+ .+..+++++|++|++++||||++.+||.+|+.+|+.+++|..+...
T Consensus       193 ~~kpk~~~~~~~~~~lgi~~~e~i~iGD~~~nDi~~a~~aG~~~i~v~~g~~~  245 (271)
T 1vjr_A          193 AGKPNPLVVDVISEKFGVPKERMAMVGDRLYTDVKLGKNAGIVSILVLTGETT  245 (271)
T ss_dssp             CSTTSTHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHHHTCEEEEESSSSCC
T ss_pred             CCCCCHHHHHHHHHHhCCCCceEEEECCCcHHHHHHHHHcCCeEEEECCCCCC
Confidence            458888 5789999999999999999999658999999999999999876543

>3nuq_A Protein SSM1, putative nucleotide phosphatase; suppresses the 6-AU sensitivity of transcription elongation II; 1.70A {Saccharomyces cerevisiae} PDB: 3onn_A 3opx_A*

Probab=99.38  E-value=1.7e-12  Score=119.58  Aligned_cols=94  Identities=20%  Similarity=0.177  Sum_probs=77.6

Q ss_pred             cchhHHHHHHHHHHhCCC--eEEEEeCCCCCCCCCccHHHHHHHHHHhCCe----EEEc--------ccCCCch-hHHHH
Q 017982          202 LWGPLSSSIEQCKSVFGH--DIAVFSNSAGLYEYDNDASKARKLEGKIGIK----VIRH--------RVKKPAG-TAEEI  266 (363)
Q Consensus       202 ~~p~v~e~L~~Lk~~~Gi--kl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~----~I~~--------~~kKP~p-~~~~a  266 (363)
                      ++|++.++|+.|+ +.|+  +++|+||+.        ...+..+++.+|+.    .+..        ...||.+ .+..+
T Consensus       143 ~~p~~~~~L~~L~-~~g~~~~l~i~Tn~~--------~~~~~~~l~~~gl~~~fd~v~~~~~~~~~~~~~Kp~~~~~~~~  213 (282)
T 3nuq_A          143 PDIPLRNMLLRLR-QSGKIDKLWLFTNAY--------KNHAIRCLRLLGIADLFDGLTYCDYSRTDTLVCKPHVKAFEKA  213 (282)
T ss_dssp             CCHHHHHHHHHHH-HSSSCSEEEEECSSC--------HHHHHHHHHHHTCTTSCSEEECCCCSSCSSCCCTTSHHHHHHH
T ss_pred             cChhHHHHHHHHH-hCCCCceEEEEECCC--------hHHHHHHHHhCCcccccceEEEeccCCCcccCCCcCHHHHHHH
Confidence            4789999999998 5799  999999996        35667778888874    2321        3459998 57999


Q ss_pred             HHHhCCCC-CcEEEEccCCcccHHHHHHcCC-eEEEEcCCC
Q 017982          267 EKHFGCQS-SQLIMVGDRPFTDIVYGNRNGF-LTILTEPLS  305 (363)
Q Consensus       267 lk~lgl~p-ee~vmVGDrL~TDI~~A~raGi-~TIlV~p~~  305 (363)
                      ++++|++| ++++||||+. +||.+|+++|+ .++++.+..
T Consensus       214 ~~~lgi~~~~~~i~vGD~~-~Di~~a~~aG~~~~~~~~~~~  253 (282)
T 3nuq_A          214 MKESGLARYENAYFIDDSG-KNIETGIKLGMKTCIHLVENE  253 (282)
T ss_dssp             HHHHTCCCGGGEEEEESCH-HHHHHHHHHTCSEEEEECSCC
T ss_pred             HHHcCCCCcccEEEEcCCH-HHHHHHHHCCCeEEEEEcCCc
Confidence            99999999 9999999999 89999999999 667776554

>3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} SCOP: c.108.1.0

Probab=99.38  E-value=1.3e-12  Score=114.39  Aligned_cols=90  Identities=10%  Similarity=0.125  Sum_probs=75.4

Q ss_pred             CcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCeEEEc------------------ccCCCch-
Q 017982          201 TLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKVIRH------------------RVKKPAG-  261 (363)
Q Consensus       201 ~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~~I~~------------------~~kKP~p-  261 (363)
                      .++|++.+.|+.|+ +.|++++|+||+.        ...++.+++.+|+..++.                  ..+||.+ 
T Consensus        75 ~~~~~~~~~l~~l~-~~g~~~~i~S~~~--------~~~~~~~l~~~gl~~~f~~~~~~~~~~~~~~~~~~~~~~k~k~~  145 (217)
T 3m1y_A           75 PLFEGALELVSALK-EKNYKVVCFSGGF--------DLATNHYRDLLHLDAAFSNTLIVENDALNGLVTGHMMFSHSKGE  145 (217)
T ss_dssp             CBCBTHHHHHHHHH-TTTEEEEEEEEEE--------HHHHHHHHHHHTCSEEEEEEEEEETTEEEEEEEESCCSTTHHHH
T ss_pred             cCCCCHHHHHHHHH-HCCCEEEEEcCCc--------hhHHHHHHHHcCcchhccceeEEeCCEEEeeeccCCCCCCChHH
Confidence            35788999999998 6799999999985        366778888889863220                  1368888 


Q ss_pred             hHHHHHHHhCCCCCcEEEEccCCcccHHHHHHcCCeEEE
Q 017982          262 TAEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGFLTIL  300 (363)
Q Consensus       262 ~~~~alk~lgl~pee~vmVGDrL~TDI~~A~raGi~TIl  300 (363)
                      .+..+++++|++|++++||||+. +|+.+|+.+|+.+++
T Consensus       146 ~~~~~~~~~g~~~~~~i~vGDs~-~Di~~a~~aG~~~~~  183 (217)
T 3m1y_A          146 MLLVLQRLLNISKTNTLVVGDGA-NDLSMFKHAHIKIAF  183 (217)
T ss_dssp             HHHHHHHHHTCCSTTEEEEECSG-GGHHHHTTCSEEEEE
T ss_pred             HHHHHHHHcCCCHhHEEEEeCCH-HHHHHHHHCCCeEEE
Confidence            57899999999999999999998 899999999998876

>3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis}

Probab=99.36  E-value=8.8e-13  Score=115.93  Aligned_cols=105  Identities=17%  Similarity=0.179  Sum_probs=83.6

Q ss_pred             cCCCEEEEcCCceeecCCCCC------------cchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhC
Q 017982          181 RGFKGVVFDKDNTLTAPYSLT------------LWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIG  248 (363)
Q Consensus       181 ~GIkaVV~DlDnTL~~~~~~~------------~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LG  248 (363)
                      .++++|+||+|+||+. ....            ..++.  .|+.|+ +.|++++|+||+.        ...++.+++.+|
T Consensus        10 ~~~k~vifD~DGTL~d-~~~~~~~~~~~~~~~~~~~~~--~l~~L~-~~g~~~~i~T~~~--------~~~~~~~~~~lg   77 (176)
T 3mmz_A           10 EDIDAVVLDFDGTQTD-DRVLIDSDGREFVSVHRGDGL--GIAALR-KSGLTMLILSTEQ--------NPVVAARARKLK   77 (176)
T ss_dssp             GGCSEEEECCTTTTSC-SCCEECTTCCEEEEEEHHHHH--HHHHHH-HTTCEEEEEESSC--------CHHHHHHHHHHT
T ss_pred             hcCCEEEEeCCCCcCc-CCEeecCCccHhHhcccccHH--HHHHHH-HCCCeEEEEECcC--------hHHHHHHHHHcC
Confidence            3689999999999986 2111            01111  488888 5799999999996        367889999999


Q ss_pred             CeEEEcccCCCch-hHHHHHHHhCCCCCcEEEEccCCcccHHHHHHcCCeEEE
Q 017982          249 IKVIRHRVKKPAG-TAEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGFLTIL  300 (363)
Q Consensus       249 i~~I~~~~kKP~p-~~~~alk~lgl~pee~vmVGDrL~TDI~~A~raGi~TIl  300 (363)
                      ++ ++. ..||.+ .+..+++.+|+++++++||||+. +|+.+++.+|+..+.
T Consensus        78 i~-~~~-~~~~k~~~l~~~~~~~~~~~~~~~~vGD~~-nD~~~~~~ag~~v~~  127 (176)
T 3mmz_A           78 IP-VLH-GIDRKDLALKQWCEEQGIAPERVLYVGNDV-NDLPCFALVGWPVAV  127 (176)
T ss_dssp             CC-EEE-SCSCHHHHHHHHHHHHTCCGGGEEEEECSG-GGHHHHHHSSEEEEC
T ss_pred             Ce-eEe-CCCChHHHHHHHHHHcCCCHHHEEEEcCCH-HHHHHHHHCCCeEEC
Confidence            99 433 358887 57899999999999999999999 899999999976443

>3umc_A Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeruginosa}

Probab=99.36  E-value=1.9e-12  Score=115.60  Aligned_cols=89  Identities=12%  Similarity=0.165  Sum_probs=74.6

Q ss_pred             chhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCe--EEE----cccCCCch-hHHHHHHHhCCCCC
Q 017982          203 WGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK--VIR----HRVKKPAG-TAEEIEKHFGCQSS  275 (363)
Q Consensus       203 ~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~--~I~----~~~kKP~p-~~~~alk~lgl~pe  275 (363)
                      +|++.++|+.|++  +++++|+||..        ...+..+++.+|+.  .+.    ....||.+ .++.+++++|++|+
T Consensus       122 ~~~~~~~l~~l~~--~~~~~i~s~~~--------~~~~~~~l~~~g~~f~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~  191 (254)
T 3umc_A          122 WPDTLAGMHALKA--DYWLAALSNGN--------TALMLDVARHAGLPWDMLLCADLFGHYKPDPQVYLGACRLLDLPPQ  191 (254)
T ss_dssp             CTTHHHHHHHHTT--TSEEEECCSSC--------HHHHHHHHHHHTCCCSEECCHHHHTCCTTSHHHHHHHHHHHTCCGG
T ss_pred             CccHHHHHHHHHh--cCeEEEEeCCC--------HHHHHHHHHHcCCCcceEEeecccccCCCCHHHHHHHHHHcCCChH
Confidence            5778888888873  48999999986        35667778888875  232    24689998 67999999999999


Q ss_pred             cEEEEccCCcccHHHHHHcCCeEEEEc
Q 017982          276 QLIMVGDRPFTDIVYGNRNGFLTILTE  302 (363)
Q Consensus       276 e~vmVGDrL~TDI~~A~raGi~TIlV~  302 (363)
                      +++||||+. +||.+|+.+|+.+++|+
T Consensus       192 ~~~~iGD~~-~Di~~a~~aG~~~~~~~  217 (254)
T 3umc_A          192 EVMLCAAHN-YDLKAARALGLKTAFIA  217 (254)
T ss_dssp             GEEEEESCH-HHHHHHHHTTCEEEEEC
T ss_pred             HEEEEcCch-HhHHHHHHCCCeEEEEe
Confidence            999999996 99999999999999998

>3qgm_A P-nitrophenyl phosphatase (PHO2); structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.00A {Archaeoglobus fulgidus} SCOP: c.108.1.0

Probab=99.35  E-value=1e-11  Score=113.76  Aligned_cols=54  Identities=26%  Similarity=0.302  Sum_probs=47.7

Q ss_pred             cCCCch-hHHHHHHHhCCCCCcEEEEccCCcccHHHHHHcCCeEEEEcCCCCCCc
Q 017982          256 VKKPAG-TAEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGFLTILTEPLSLAEE  309 (363)
Q Consensus       256 ~kKP~p-~~~~alk~lgl~pee~vmVGDrL~TDI~~A~raGi~TIlV~p~~~~~e  309 (363)
                      .+||.+ .++.+++++|+++++++||||++.+||.+|+++|+.+++|..+....+
T Consensus       185 ~~kp~~~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~~~~~g~~~~~v~~g~~~~~  239 (268)
T 3qgm_A          185 VGKPSEVIMREALDILGLDAKDVAVVGDQIDVDVAAGKAIGAETVLVLTGVTTRE  239 (268)
T ss_dssp             CSTTSHHHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHHTCEEEEESSSSCCTT
T ss_pred             cCCCCHHHHHHHHHHhCCCchhEEEECCCchHHHHHHHHCCCcEEEECCCCCCHH
Confidence            478988 578999999999999999999976899999999999999987765433

>3l5k_A Protein GS1, haloacid dehalogenase-like hydrolase domain- containing protein 1A; HDHD1A, haloacid dehalogenase-like hydrolase domain containing 1A; 2.00A {Homo sapiens}

Probab=99.34  E-value=2.3e-12  Score=115.93  Aligned_cols=96  Identities=15%  Similarity=0.123  Sum_probs=73.4

Q ss_pred             cchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHH-HHhCC----eEEE------cccCCCch-hHHHHHHH
Q 017982          202 LWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLE-GKIGI----KVIR------HRVKKPAG-TAEEIEKH  269 (363)
Q Consensus       202 ~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~-~~LGi----~~I~------~~~kKP~p-~~~~alk~  269 (363)
                      ++|++.++|+.|+ +.|++++|+||+.        ...+...+ +.+|+    +.+.      ....||.+ .+..++++
T Consensus       113 ~~~~~~~~l~~l~-~~g~~~~i~sn~~--------~~~~~~~l~~~~~l~~~f~~~~~~~~~~~~~~Kp~~~~~~~~~~~  183 (250)
T 3l5k_A          113 LMPGAEKLIIHLR-KHGIPFALATSSR--------SASFDMKTSRHKEFFSLFSHIVLGDDPEVQHGKPDPDIFLACAKR  183 (250)
T ss_dssp             BCTTHHHHHHHHH-HTTCCEEEECSCC--------HHHHHHHTTTCHHHHTTSSCEECTTCTTCCSCTTSTHHHHHHHHT
T ss_pred             CCCCHHHHHHHHH-hCCCcEEEEeCCC--------HHHHHHHHHhccCHHhheeeEEecchhhccCCCCChHHHHHHHHH
Confidence            5678888899998 5799999999996        12233222 22232    2222      13579998 67999999


Q ss_pred             hCCCC--CcEEEEccCCcccHHHHHHcCCeEEEEcCCCCC
Q 017982          270 FGCQS--SQLIMVGDRPFTDIVYGNRNGFLTILTEPLSLA  307 (363)
Q Consensus       270 lgl~p--ee~vmVGDrL~TDI~~A~raGi~TIlV~p~~~~  307 (363)
                      +|+++  ++++||||+. +||.+|+++|+.+|+|..+...
T Consensus       184 lgi~~~~~~~i~iGD~~-~Di~~a~~aG~~~i~v~~~~~~  222 (250)
T 3l5k_A          184 FSPPPAMEKCLVFEDAP-NGVEAALAAGMQVVMVPDGNLS  222 (250)
T ss_dssp             SSSCCCGGGEEEEESSH-HHHHHHHHTTCEEEECCCTTSC
T ss_pred             cCCCCCcceEEEEeCCH-HHHHHHHHcCCEEEEEcCCCCc
Confidence            99998  9999999999 9999999999999999876643

>2ah5_A COG0546: predicted phosphatases; MCSG, structural genomics, hydrola haloacid dehalogenase-like, PSI; 1.74A {Streptococcus pneumoniae} SCOP: c.108.1.6

Probab=99.34  E-value=3.1e-12  Score=113.28  Aligned_cols=95  Identities=13%  Similarity=0.137  Sum_probs=79.9

Q ss_pred             CCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCe----EEE--cccCCCch-hHHHHHHHhCC
Q 017982          200 LTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK----VIR--HRVKKPAG-TAEEIEKHFGC  272 (363)
Q Consensus       200 ~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~----~I~--~~~kKP~p-~~~~alk~lgl  272 (363)
                      ..++|++.+.|+.|+ + |++++|+||+.        ...++.+++.+|+.    .+.  ....||.| .+..+++++|+
T Consensus        83 ~~~~~g~~~~l~~L~-~-~~~l~i~T~~~--------~~~~~~~l~~~gl~~~f~~i~~~~~~~Kp~p~~~~~~~~~lg~  152 (210)
T 2ah5_A           83 AQLFPQIIDLLEELS-S-SYPLYITTTKD--------TSTAQDMAKNLEIHHFFDGIYGSSPEAPHKADVIHQALQTHQL  152 (210)
T ss_dssp             CEECTTHHHHHHHHH-T-TSCEEEEEEEE--------HHHHHHHHHHTTCGGGCSEEEEECSSCCSHHHHHHHHHHHTTC
T ss_pred             CCCCCCHHHHHHHHH-c-CCeEEEEeCCC--------HHHHHHHHHhcCchhheeeeecCCCCCCCChHHHHHHHHHcCC
Confidence            356899999999998 6 99999999995        35567778888875    222  13469998 67999999999


Q ss_pred             CCCcEEEEccCCcccHHHHHHcCCeEEEEcCCC
Q 017982          273 QSSQLIMVGDRPFTDIVYGNRNGFLTILTEPLS  305 (363)
Q Consensus       273 ~pee~vmVGDrL~TDI~~A~raGi~TIlV~p~~  305 (363)
                      +|++|+||||+. .||.+|+++|+.+|+|..+.
T Consensus       153 ~p~~~~~vgDs~-~Di~~a~~aG~~~i~v~~~~  184 (210)
T 2ah5_A          153 APEQAIIIGDTK-FDMLGARETGIQKLAITWGF  184 (210)
T ss_dssp             CGGGEEEEESSH-HHHHHHHHHTCEEEEESSSS
T ss_pred             CcccEEEECCCH-HHHHHHHHCCCcEEEEcCCC
Confidence            999999999998 89999999999999998654

>3mn1_A Probable YRBI family phosphatase; structural genomics, PSI, protein structure initiative, NYSG phosphatase; 1.80A {Pseudomonas syringae PV} PDB: 3nrj_A

Probab=99.34  E-value=2.6e-12  Score=114.13  Aligned_cols=109  Identities=17%  Similarity=0.152  Sum_probs=83.8

Q ss_pred             cCCCEEEEcCCceeecCCC----C-C----cchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCeE
Q 017982          181 RGFKGVVFDKDNTLTAPYS----L-T----LWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKV  251 (363)
Q Consensus       181 ~GIkaVV~DlDnTL~~~~~----~-~----~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~~  251 (363)
                      ..+++|+||+|+||+....    . .    ..-.-..+|+.|+ +.|++++|+||+.        ...++.+++.+|+..
T Consensus        17 ~~ik~vifD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~l~~L~-~~g~~~~i~T~~~--------~~~~~~~~~~lgl~~   87 (189)
T 3mn1_A           17 KAIKLAVFDVDGVLTDGRLYFMEDGSEIKTFNTLDGQGIKMLI-ASGVTTAIISGRK--------TAIVERRAKSLGIEH   87 (189)
T ss_dssp             HTCCEEEECSTTTTSCSEEEEETTSCEEEEEEHHHHHHHHHHH-HTTCEEEEECSSC--------CHHHHHHHHHHTCSE
T ss_pred             HhCCEEEEcCCCCcCCccEeeccCCcEeeeeccccHHHHHHHH-HCCCEEEEEECcC--------hHHHHHHHHHcCCHH
Confidence            5799999999999975211    0 0    0011112788888 5799999999996        367889999999986


Q ss_pred             EEcccCCCch-hHHHHHHHhCCCCCcEEEEccCCcccHHHHHHcCCeEEE
Q 017982          252 IRHRVKKPAG-TAEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGFLTIL  300 (363)
Q Consensus       252 I~~~~kKP~p-~~~~alk~lgl~pee~vmVGDrL~TDI~~A~raGi~TIl  300 (363)
                      ++... ++.+ .+..+++++|+++++++||||+. +|+.+++++|+..+.
T Consensus        88 ~f~~~-~~K~~~~~~~~~~~g~~~~~~~~vGD~~-nDi~~~~~ag~~~~~  135 (189)
T 3mn1_A           88 LFQGR-EDKLVVLDKLLAELQLGYEQVAYLGDDL-PDLPVIRRVGLGMAV  135 (189)
T ss_dssp             EECSC-SCHHHHHHHHHHHHTCCGGGEEEEECSG-GGHHHHHHSSEEEEC
T ss_pred             HhcCc-CChHHHHHHHHHHcCCChhHEEEECCCH-HHHHHHHHCCCeEEe
Confidence            65332 4444 57889999999999999999999 899999999986543

>1yns_A E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo sapiens} SCOP: c.108.1.22 PDB: 1zs9_A

Probab=99.33  E-value=7.8e-12  Score=116.25  Aligned_cols=95  Identities=11%  Similarity=0.210  Sum_probs=77.6

Q ss_pred             CCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHh---CCe----EEE---cccCCCch-hHHHHH
Q 017982          199 SLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKI---GIK----VIR---HRVKKPAG-TAEEIE  267 (363)
Q Consensus       199 ~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~L---Gi~----~I~---~~~kKP~p-~~~~al  267 (363)
                      ...++|++.++|+.|+ +.|++++|+||++        ...++.+++.+   |+.    .+.   .+ .||++ .|..++
T Consensus       128 ~~~~~~g~~~~L~~L~-~~g~~~~i~Tn~~--------~~~~~~~l~~~~~~~l~~~fd~i~~~~~~-~KP~p~~~~~~~  197 (261)
T 1yns_A          128 KAEFFADVVPAVRKWR-EAGMKVYIYSSGS--------VEAQKLLFGHSTEGDILELVDGHFDTKIG-HKVESESYRKIA  197 (261)
T ss_dssp             CBCCCTTHHHHHHHHH-HTTCEEEEECSSC--------HHHHHHHHHTBTTBCCGGGCSEEECGGGC-CTTCHHHHHHHH
T ss_pred             ccccCcCHHHHHHHHH-hCCCeEEEEeCCC--------HHHHHHHHHhhcccChHhhccEEEecCCC-CCCCHHHHHHHH
Confidence            3467999999999998 5799999999996        24455666643   343    232   34 89999 579999


Q ss_pred             HHhCCCCCcEEEEccCCcccHHHHHHcCCeEEEEcCC
Q 017982          268 KHFGCQSSQLIMVGDRPFTDIVYGNRNGFLTILTEPL  304 (363)
Q Consensus       268 k~lgl~pee~vmVGDrL~TDI~~A~raGi~TIlV~p~  304 (363)
                      +++|++|++|+||||+. +||.+|+++||.+|+|...
T Consensus       198 ~~lg~~p~~~l~VgDs~-~di~aA~~aG~~~i~v~~~  233 (261)
T 1yns_A          198 DSIGCSTNNILFLTDVT-REASAAEEADVHVAVVVRP  233 (261)
T ss_dssp             HHHTSCGGGEEEEESCH-HHHHHHHHTTCEEEEECCT
T ss_pred             HHhCcCcccEEEEcCCH-HHHHHHHHCCCEEEEEeCC
Confidence            99999999999999995 9999999999999999743

>4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp}

Probab=99.32  E-value=5e-12  Score=122.05  Aligned_cols=90  Identities=16%  Similarity=0.146  Sum_probs=76.0

Q ss_pred             CcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCeEEEc------------------ccCCCch-
Q 017982          201 TLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKVIRH------------------RVKKPAG-  261 (363)
Q Consensus       201 ~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~~I~~------------------~~kKP~p-  261 (363)
                      .++|++.++|+.|+ +.|++++|+||+.        ...++.+++.+|+..++.                  ..+||.+ 
T Consensus       179 ~l~pg~~e~L~~Lk-~~G~~v~IvSn~~--------~~~~~~~l~~lgl~~~f~~~l~~~dg~~tg~i~~~~~~~kpkp~  249 (317)
T 4eze_A          179 TLSPGLLTILPVIK-AKGFKTAIISGGL--------DIFTQRLKARYQLDYAFSNTVEIRDNVLTDNITLPIMNAANKKQ  249 (317)
T ss_dssp             CBCTTHHHHHHHHH-HTTCEEEEEEEEE--------HHHHHHHHHHHTCSEEEEECEEEETTEEEEEECSSCCCHHHHHH
T ss_pred             EECcCHHHHHHHHH-hCCCEEEEEeCcc--------HHHHHHHHHHcCCCeEEEEEEEeeCCeeeeeEecccCCCCCCHH
Confidence            46889999999998 5799999999985        467888999999874321                  1237887 


Q ss_pred             hHHHHHHHhCCCCCcEEEEccCCcccHHHHHHcCCeEEE
Q 017982          262 TAEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGFLTIL  300 (363)
Q Consensus       262 ~~~~alk~lgl~pee~vmVGDrL~TDI~~A~raGi~TIl  300 (363)
                      .+..+++++|++|++++||||+. +|+.+|+++|+..++
T Consensus       250 ~~~~~~~~lgv~~~~~i~VGDs~-~Di~aa~~AG~~va~  287 (317)
T 4eze_A          250 TLVDLAARLNIATENIIACGDGA-NDLPMLEHAGTGIAW  287 (317)
T ss_dssp             HHHHHHHHHTCCGGGEEEEECSG-GGHHHHHHSSEEEEE
T ss_pred             HHHHHHHHcCCCcceEEEEeCCH-HHHHHHHHCCCeEEe
Confidence            57899999999999999999998 899999999987666

>2hi0_A Putative phosphoglycolate phosphatase; YP_619066.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.51A {Lactobacillus delbrueckii}

Probab=99.31  E-value=4.8e-12  Score=114.05  Aligned_cols=96  Identities=18%  Similarity=0.139  Sum_probs=80.4

Q ss_pred             CCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCe---EEE----cccCCCch-hHHHHHHHhC
Q 017982          200 LTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK---VIR----HRVKKPAG-TAEEIEKHFG  271 (363)
Q Consensus       200 ~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~---~I~----~~~kKP~p-~~~~alk~lg  271 (363)
                      ..++|++.+.|+.|+ +.|++++|+||+.        ...++.+++.+|+.   .+.    ...+||.+ .+..+++++|
T Consensus       109 ~~~~~g~~~~l~~l~-~~g~~~~i~t~~~--------~~~~~~~l~~~~l~~f~~~~~~~~~~~~Kp~p~~~~~~~~~l~  179 (240)
T 2hi0_A          109 TGPFPGILDLMKNLR-QKGVKLAVVSNKP--------NEAVQVLVEELFPGSFDFALGEKSGIRRKPAPDMTSECVKVLG  179 (240)
T ss_dssp             CEECTTHHHHHHHHH-HTTCEEEEEEEEE--------HHHHHHHHHHHSTTTCSEEEEECTTSCCTTSSHHHHHHHHHHT
T ss_pred             CCcCCCHHHHHHHHH-HCCCEEEEEeCCC--------HHHHHHHHHHcCCcceeEEEecCCCCCCCCCHHHHHHHHHHcC
Confidence            456899999999998 5799999999985        35567777787764   232    24679998 5799999999


Q ss_pred             CCCCcEEEEccCCcccHHHHHHcCCeEEEEcCCC
Q 017982          272 CQSSQLIMVGDRPFTDIVYGNRNGFLTILTEPLS  305 (363)
Q Consensus       272 l~pee~vmVGDrL~TDI~~A~raGi~TIlV~p~~  305 (363)
                      ++|++|+||||+. +||.+|+++|+.+|+|..+.
T Consensus       180 ~~~~~~~~vGDs~-~Di~~a~~aG~~~v~v~~~~  212 (240)
T 2hi0_A          180 VPRDKCVYIGDSE-IDIQTARNSEMDEIAVNWGF  212 (240)
T ss_dssp             CCGGGEEEEESSH-HHHHHHHHTTCEEEEESSSS
T ss_pred             CCHHHeEEEcCCH-HHHHHHHHCCCeEEEECCCC
Confidence            9999999999997 89999999999999997654

>3pdw_A Uncharacterized hydrolase YUTF; structural genomics, PSI2, NYSGXRC, protein structure initia YORK SGX research center for structural genomics; 1.60A {Bacillus subtilis} SCOP: c.108.1.0

Probab=99.31  E-value=1.1e-11  Score=113.62  Aligned_cols=51  Identities=31%  Similarity=0.420  Sum_probs=44.9

Q ss_pred             cCCCch-hHHHHHHHhCCCCCcEEEEccCCcccHHHHHHcCCeEEEEcCCCC
Q 017982          256 VKKPAG-TAEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGFLTILTEPLSL  306 (363)
Q Consensus       256 ~kKP~p-~~~~alk~lgl~pee~vmVGDrL~TDI~~A~raGi~TIlV~p~~~  306 (363)
                      .+||.+ .++.+++++|+++++++||||++.+||.+|+.+|+.+++|..+..
T Consensus       181 ~~kp~~~~~~~~~~~lgi~~~~~~~iGD~~~~Di~~~~~aG~~~~~v~~g~~  232 (266)
T 3pdw_A          181 IGKPESIIMEQAMRVLGTDVSETLMVGDNYATDIMAGINAGMDTLLVHTGVT  232 (266)
T ss_dssp             CSTTSSHHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHHTCEEEEECCC--
T ss_pred             cCCCCHHHHHHHHHHcCCChhhEEEECCCcHHHHHHHHHCCCeEEEECCCCC
Confidence            578888 578999999999999999999966999999999999999986543

>1zjj_A Hypothetical protein PH1952; alpha/beta hydrolase fold, HAD superfamily, structural genom riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii}

Probab=99.30  E-value=1.1e-11  Score=114.34  Aligned_cols=111  Identities=18%  Similarity=0.175  Sum_probs=85.3

Q ss_pred             CCceeecCCCCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCC--CC--cc-HHHHHHHHHHhCCeEEEcccCCCch-hH
Q 017982          190 KDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYE--YD--ND-ASKARKLEGKIGIKVIRHRVKKPAG-TA  263 (363)
Q Consensus       190 lDnTL~~~~~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~--~d--p~-~~~a~~i~~~LGi~~I~~~~kKP~p-~~  263 (363)
                      .|..+..+.....+|++.++++.|+  .|+++ |+||++....  ..  +. +.....+...++...+.  .+||++ .+
T Consensus       119 ~~~v~~g~~~~~~~~~~~~~l~~L~--~g~~~-i~tn~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~--~~KP~~~~~  193 (263)
T 1zjj_A          119 VKHVVVGLDPDLTYEKLKYATLAIR--NGATF-IGTNPDATLPGEEGIYPGAGSIIAALKVATNVEPII--IGKPNEPMY  193 (263)
T ss_dssp             CCEEEECCCTTCBHHHHHHHHHHHH--TTCEE-EESCCCSEEEETTEEEECHHHHHHHHHHHHCCCCEE--CSTTSHHHH
T ss_pred             CCEEEEecCCCCCHHHHHHHHHHHH--CCCEE-EEECCCccccCCCCCcCCcHHHHHHHHHHhCCCccE--ecCCCHHHH
Confidence            5556666666778999999999997  48887 9999985432  00  11 34445566667766543  689999 56


Q ss_pred             HHHHHHhCCCCCcEEEEccCCcccHHHHHHcCCeEEEEcCCCCC
Q 017982          264 EEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGFLTILTEPLSLA  307 (363)
Q Consensus       264 ~~alk~lgl~pee~vmVGDrL~TDI~~A~raGi~TIlV~p~~~~  307 (363)
                      +.++++  ++|++++||||++.+||.+|+++|+.+|||..+...
T Consensus       194 ~~~~~~--~~~~~~~~VGD~~~~Di~~A~~aG~~~i~v~~g~~~  235 (263)
T 1zjj_A          194 EVVREM--FPGEELWMVGDRLDTDIAFAKKFGMKAIMVLTGVSS  235 (263)
T ss_dssp             HHHHHH--STTCEEEEEESCTTTHHHHHHHTTCEEEEESSSSCC
T ss_pred             HHHHHh--CCcccEEEECCChHHHHHHHHHcCCeEEEECCCCCC
Confidence            888888  999999999999879999999999999999876543

>1yv9_A Hydrolase, haloacid dehalogenase family; hypothetical protein, struc genomics, PSI, protein structure initiative; 2.80A {Enterococcus faecalis} SCOP: c.108.1.14

Probab=99.30  E-value=1.3e-11  Score=112.69  Aligned_cols=127  Identities=20%  Similarity=0.171  Sum_probs=92.8

Q ss_pred             HHHHHcCCCEEEEcCCceeecCCCCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCC-C---c-cHHHHHHHHHHhCCe
Q 017982          176 AELQRRGFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEY-D---N-DASKARKLEGKIGIK  250 (363)
Q Consensus       176 ~~L~~~GIkaVV~DlDnTL~~~~~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~-d---p-~~~~a~~i~~~LGi~  250 (363)
                      +.|++.|+.....+.|..+..+.....+|++.++|+.|+  .|+++ |+||.+...+. .   . .+.....+...++..
T Consensus       101 ~~l~~~g~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~l~--~g~~~-i~tn~~~~~~~~~~~~~~~~~l~~~f~~~~~~~  177 (264)
T 1yv9_A          101 DLILEAGFEWDETNPDYVVVGLDTELSYEKVVLATLAIQ--KGALF-IGTNPDKNIPTERGLLPGAGSVVTFVETATQTK  177 (264)
T ss_dssp             HHHHHTTCEECSSSCSEEEECCCTTCCHHHHHHHHHHHH--TTCEE-EESCCCSEEEETTEEEECHHHHHHHHHHHHTCC
T ss_pred             HHHHHcCCcccCCCCCEEEEECCCCcCHHHHHHHHHHHh--CCCEE-EEECCCCcccCCCCcccCCcHHHHHHHHHhCCC
Confidence            566777876543344444555556678999999999996  58886 99998753210 0   0 112334455555655


Q ss_pred             EEEcccCCCch-hHHHHHHHhCCCCCcEEEEccCCcccHHHHHHcCCeEEEEcCCCCC
Q 017982          251 VIRHRVKKPAG-TAEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGFLTILTEPLSLA  307 (363)
Q Consensus       251 ~I~~~~kKP~p-~~~~alk~lgl~pee~vmVGDrL~TDI~~A~raGi~TIlV~p~~~~  307 (363)
                      .+  ..+||++ .+..+++++|++|++++||||++.+||.+|+++|+.+|+|..+...
T Consensus       178 ~~--~~~KP~p~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~aG~~~i~v~~g~~~  233 (264)
T 1yv9_A          178 PV--YIGKPKAIIMERAIAHLGVEKEQVIMVGDNYETDIQSGIQNGIDSLLVTSGFTP  233 (264)
T ss_dssp             CE--ECSTTSHHHHHHHHHHHCSCGGGEEEEESCTTTHHHHHHHHTCEEEEETTSSSC
T ss_pred             cc--ccCCCCHHHHHHHHHHcCCCHHHEEEECCCcHHHHHHHHHcCCcEEEECCCCCC
Confidence            44  3689998 6799999999999999999999769999999999999999876544

>3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311}

Probab=99.30  E-value=2.2e-11  Score=104.61  Aligned_cols=95  Identities=14%  Similarity=0.162  Sum_probs=80.9

Q ss_pred             CcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCe----EEE----cccCCCch-hHHHHHHHhC
Q 017982          201 TLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK----VIR----HRVKKPAG-TAEEIEKHFG  271 (363)
Q Consensus       201 ~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~----~I~----~~~kKP~p-~~~~alk~lg  271 (363)
                      .++|++.++|+.|+ +.|++++|+||..        ...++.+++.+|+.    .+.    ....||.+ .+..+++++|
T Consensus        89 ~~~~~~~~~l~~l~-~~g~~~~i~s~~~--------~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~  159 (214)
T 3e58_A           89 LIFPDVLKVLNEVK-SQGLEIGLASSSV--------KADIFRALEENRLQGFFDIVLSGEEFKESKPNPEIYLTALKQLN  159 (214)
T ss_dssp             HBCTTHHHHHHHHH-HTTCEEEEEESSC--------HHHHHHHHHHTTCGGGCSEEEEGGGCSSCTTSSHHHHHHHHHHT
T ss_pred             CcCchHHHHHHHHH-HCCCCEEEEeCCc--------HHHHHHHHHHcCcHhheeeEeecccccCCCCChHHHHHHHHHcC
Confidence            46899999999998 5799999999996        35677888888874    232    24579998 6799999999


Q ss_pred             CCCCcEEEEccCCcccHHHHHHcCCeEEEEcCCC
Q 017982          272 CQSSQLIMVGDRPFTDIVYGNRNGFLTILTEPLS  305 (363)
Q Consensus       272 l~pee~vmVGDrL~TDI~~A~raGi~TIlV~p~~  305 (363)
                      ++|++++||||+. +||.+|+++|+.++++....
T Consensus       160 ~~~~~~~~iGD~~-~Di~~a~~aG~~~~~~~~~~  192 (214)
T 3e58_A          160 VQASRALIIEDSE-KGIAAGVAADVEVWAIRDNE  192 (214)
T ss_dssp             CCGGGEEEEECSH-HHHHHHHHTTCEEEEECCSS
T ss_pred             CChHHeEEEeccH-hhHHHHHHCCCEEEEECCCC
Confidence            9999999999996 99999999999999998643

>2gfh_A Haloacid dehalogenase-like hydrolase domain conta; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.90A {Mus musculus} SCOP: c.108.1.6 PDB: 2w4m_A

Probab=99.29  E-value=1.3e-11  Score=113.87  Aligned_cols=95  Identities=20%  Similarity=0.237  Sum_probs=79.0

Q ss_pred             CCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCe----EEE----cccCCCch-hHHHHHHHh
Q 017982          200 LTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK----VIR----HRVKKPAG-TAEEIEKHF  270 (363)
Q Consensus       200 ~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~----~I~----~~~kKP~p-~~~~alk~l  270 (363)
                      ..++|++.++|+.|+ + |++++|+||++        ...+..+++.+|+.    .+.    ....||++ .+..+++++
T Consensus       120 ~~~~~g~~~~L~~L~-~-~~~l~i~Tn~~--------~~~~~~~l~~~gl~~~f~~i~~~~~~~~~KP~p~~~~~~~~~~  189 (260)
T 2gfh_A          120 MILADDVKAMLTELR-K-EVRLLLLTNGD--------RQTQREKIEACACQSYFDAIVIGGEQKEEKPAPSIFYHCCDLL  189 (260)
T ss_dssp             CCCCHHHHHHHHHHH-T-TSEEEEEECSC--------HHHHHHHHHHHTCGGGCSEEEEGGGSSSCTTCHHHHHHHHHHH
T ss_pred             CCCCcCHHHHHHHHH-c-CCcEEEEECcC--------hHHHHHHHHhcCHHhhhheEEecCCCCCCCCCHHHHHHHHHHc
Confidence            457899999999998 4 68999999996        35567778888875    222    24579998 579999999


Q ss_pred             CCCCCcEEEEccCCcccHHHHHHcCC-eEEEEcCC
Q 017982          271 GCQSSQLIMVGDRPFTDIVYGNRNGF-LTILTEPL  304 (363)
Q Consensus       271 gl~pee~vmVGDrL~TDI~~A~raGi-~TIlV~p~  304 (363)
                      |++|++++||||+..+||.+|+++|+ .+|+|...
T Consensus       190 ~~~~~~~~~vGDs~~~Di~~A~~aG~~~~i~v~~~  224 (260)
T 2gfh_A          190 GVQPGDCVMVGDTLETDIQGGLNAGLKATVWINKS  224 (260)
T ss_dssp             TCCGGGEEEEESCTTTHHHHHHHTTCSEEEEECTT
T ss_pred             CCChhhEEEECCCchhhHHHHHHCCCceEEEEcCC
Confidence            99999999999974489999999999 89999754

>2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii}

Probab=99.27  E-value=1.8e-11  Score=109.67  Aligned_cols=97  Identities=21%  Similarity=0.265  Sum_probs=80.8

Q ss_pred             CCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCe----EEE----cccCCCch-hHHHHHHHh
Q 017982          200 LTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK----VIR----HRVKKPAG-TAEEIEKHF  270 (363)
Q Consensus       200 ~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~----~I~----~~~kKP~p-~~~~alk~l  270 (363)
                      ..++|++.++|+.|+ +.|++++|+||+.        ...+..+++.+|+.    .+.    .+..||.+ .+..+++++
T Consensus        93 ~~~~~~~~~~l~~l~-~~g~~~~i~t~~~--------~~~~~~~l~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~  163 (241)
T 2hoq_A           93 LREVPGARKVLIRLK-ELGYELGIITDGN--------PVKQWEKILRLELDDFFEHVIISDFEGVKKPHPKIFKKALKAF  163 (241)
T ss_dssp             CCBCTTHHHHHHHHH-HHTCEEEEEECSC--------HHHHHHHHHHTTCGGGCSEEEEGGGGTCCTTCHHHHHHHHHHH
T ss_pred             CCCCccHHHHHHHHH-HCCCEEEEEECCC--------chhHHHHHHHcCcHhhccEEEEeCCCCCCCCCHHHHHHHHHHc
Confidence            346899999999998 5799999999985        35567778888875    222    24679998 578999999


Q ss_pred             CCCCCcEEEEccCCcccHHHHHHcCCeEEEEcCCC
Q 017982          271 GCQSSQLIMVGDRPFTDIVYGNRNGFLTILTEPLS  305 (363)
Q Consensus       271 gl~pee~vmVGDrL~TDI~~A~raGi~TIlV~p~~  305 (363)
                      |++|++++||||+..+||.+|+++|+.+++|..+.
T Consensus       164 g~~~~~~i~iGD~~~~Di~~a~~aG~~~~~v~~g~  198 (241)
T 2hoq_A          164 NVKPEEALMVGDRLYSDIYGAKRVGMKTVWFRYGK  198 (241)
T ss_dssp             TCCGGGEEEEESCTTTTHHHHHHTTCEEEEECCSC
T ss_pred             CCCcccEEEECCCchHhHHHHHHCCCEEEEECCCC
Confidence            99999999999998679999999999999996543

>2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A

Probab=99.27  E-value=3.1e-11  Score=107.73  Aligned_cols=97  Identities=24%  Similarity=0.277  Sum_probs=81.2

Q ss_pred             CCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCe----EEE----cccCCCch-hHHHHHHH
Q 017982          199 SLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK----VIR----HRVKKPAG-TAEEIEKH  269 (363)
Q Consensus       199 ~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~----~I~----~~~kKP~p-~~~~alk~  269 (363)
                      ...++|++.++|+.|+ +.|++++|+||+.        ...++.+++.+|+.    .+.    ....||.+ .+..++++
T Consensus        81 ~~~~~~~~~~~l~~l~-~~g~~~~i~s~~~--------~~~~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~  151 (222)
T 2nyv_A           81 YTKPYPEIPYTLEALK-SKGFKLAVVSNKL--------EELSKKILDILNLSGYFDLIVGGDTFGEKKPSPTPVLKTLEI  151 (222)
T ss_dssp             SCEECTTHHHHHHHHH-HTTCEEEEECSSC--------HHHHHHHHHHTTCGGGCSEEECTTSSCTTCCTTHHHHHHHHH
T ss_pred             cCccCCCHHHHHHHHH-HCCCeEEEEcCCC--------HHHHHHHHHHcCCHHHheEEEecCcCCCCCCChHHHHHHHHH
Confidence            4457899999999998 5799999999985        35677888888874    233    23578988 57899999


Q ss_pred             hCCCCCcEEEEccCCcccHHHHHHcCCeEEEEcCCC
Q 017982          270 FGCQSSQLIMVGDRPFTDIVYGNRNGFLTILTEPLS  305 (363)
Q Consensus       270 lgl~pee~vmVGDrL~TDI~~A~raGi~TIlV~p~~  305 (363)
                      +|++|++++||||+. +||.+|+++|+.+|+|..+.
T Consensus       152 ~~~~~~~~~~vGD~~-~Di~~a~~aG~~~i~v~~g~  186 (222)
T 2nyv_A          152 LGEEPEKALIVGDTD-ADIEAGKRAGTKTALALWGY  186 (222)
T ss_dssp             HTCCGGGEEEEESSH-HHHHHHHHHTCEEEEETTSS
T ss_pred             hCCCchhEEEECCCH-HHHHHHHHCCCeEEEEcCCC
Confidence            999999999999995 99999999999999998543

>3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus}

Probab=99.26  E-value=1.5e-11  Score=108.85  Aligned_cols=106  Identities=19%  Similarity=0.184  Sum_probs=78.9

Q ss_pred             HHcCCCEEEEcCCceeecCCCCCcchh----------HHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHH--H
Q 017982          179 QRRGFKGVVFDKDNTLTAPYSLTLWGP----------LSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEG--K  246 (363)
Q Consensus       179 ~~~GIkaVV~DlDnTL~~~~~~~~~p~----------v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~--~  246 (363)
                      +..+||.+++|+|+||+..... +.+.          -..+|+.|+ +.|++++|+||+ .         .++.+++  .
T Consensus         5 ~~~~ikliv~D~DGtL~d~~~~-~~~~g~~~~~f~~~D~~~L~~Lk-~~Gi~~~I~Tg~-~---------~~~~~l~~l~   72 (168)
T 3ewi_A            5 KLKEIKLLVCNIDGCLTNGHIY-VSGDQKEIISYDVKDAIGISLLK-KSGIEVRLISER-A---------CSKQTLSALK   72 (168)
T ss_dssp             --CCCCEEEEECCCCCSCSCCB-CCSSCCCEEEEEHHHHHHHHHHH-HTTCEEEEECSS-C---------CCHHHHHTTC
T ss_pred             hHhcCcEEEEeCccceECCcEE-EcCCCCEEEEEecCcHHHHHHHH-HCCCEEEEEeCc-H---------HHHHHHHHhC
Confidence            3468999999999999863211 1110          123688998 579999999999 3         1345566  6


Q ss_pred             hCCeEEEcccCCCch-hHHHHHHHhCCCCCcEEEEccCCcccHHHHHHcCCeEE
Q 017982          247 IGIKVIRHRVKKPAG-TAEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGFLTI  299 (363)
Q Consensus       247 LGi~~I~~~~kKP~p-~~~~alk~lgl~pee~vmVGDrL~TDI~~A~raGi~TI  299 (363)
                      +|+. ++.+ .++.+ .+..+++++|+++++++||||+. +|+.+++.+|+..+
T Consensus        73 lgi~-~~~g-~~~K~~~l~~~~~~~gi~~~~~~~vGD~~-nDi~~~~~ag~~~a  123 (168)
T 3ewi_A           73 LDCK-TEVS-VSDKLATVDEWRKEMGLCWKEVAYLGNEV-SDEECLKRVGLSAV  123 (168)
T ss_dssp             CCCC-EECS-CSCHHHHHHHHHHHTTCCGGGEEEECCSG-GGHHHHHHSSEEEE
T ss_pred             CCcE-EEEC-CCChHHHHHHHHHHcCcChHHEEEEeCCH-hHHHHHHHCCCEEE
Confidence            7887 4333 35655 57899999999999999999999 89999999998743

>3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} SCOP: c.108.1.0

Probab=99.23  E-value=3.8e-11  Score=105.31  Aligned_cols=99  Identities=13%  Similarity=0.166  Sum_probs=82.8

Q ss_pred             CCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCe----EEE----cccCCCch-hHHHHHHH
Q 017982          199 SLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK----VIR----HRVKKPAG-TAEEIEKH  269 (363)
Q Consensus       199 ~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~----~I~----~~~kKP~p-~~~~alk~  269 (363)
                      ...++|++.++|+.|+ +.|++++|+||..        ...++.+++.+|+.    .+.    ...+||.+ .+..++++
T Consensus        84 ~~~~~~~~~~~l~~l~-~~g~~~~i~t~~~--------~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~  154 (226)
T 3mc1_A           84 ENKVYDGIEALLSSLK-DYGFHLVVATSKP--------TVFSKQILEHFKLAFYFDAIVGSSLDGKLSTKEDVIRYAMES  154 (226)
T ss_dssp             SCCBCTTHHHHHHHHH-HHTCEEEEEEEEE--------HHHHHHHHHHTTCGGGCSEEEEECTTSSSCSHHHHHHHHHHH
T ss_pred             cCccCcCHHHHHHHHH-HCCCeEEEEeCCC--------HHHHHHHHHHhCCHhheeeeeccCCCCCCCCCHHHHHHHHHH
Confidence            3457899999999998 5699999999985        35677888888875    222    24579998 67999999


Q ss_pred             hCCCCCcEEEEccCCcccHHHHHHcCCeEEEEcCCCCC
Q 017982          270 FGCQSSQLIMVGDRPFTDIVYGNRNGFLTILTEPLSLA  307 (363)
Q Consensus       270 lgl~pee~vmVGDrL~TDI~~A~raGi~TIlV~p~~~~  307 (363)
                      +|++|++++||||+. +||.+|+.+|+.+|+|..+...
T Consensus       155 lgi~~~~~i~iGD~~-~Di~~a~~aG~~~i~v~~g~~~  191 (226)
T 3mc1_A          155 LNIKSDDAIMIGDRE-YDVIGALKNNLPSIGVTYGFGS  191 (226)
T ss_dssp             HTCCGGGEEEEESSH-HHHHHHHTTTCCEEEESSSSSC
T ss_pred             hCcCcccEEEECCCH-HHHHHHHHCCCCEEEEccCCCC
Confidence            999999999999998 8999999999999999865533

>3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1}

Probab=99.23  E-value=1.9e-11  Score=106.07  Aligned_cols=93  Identities=11%  Similarity=0.003  Sum_probs=78.3

Q ss_pred             CcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCe----EEE----cccCCCch-hHHHHHHHhC
Q 017982          201 TLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK----VIR----HRVKKPAG-TAEEIEKHFG  271 (363)
Q Consensus       201 ~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~----~I~----~~~kKP~p-~~~~alk~lg  271 (363)
                      .++|++.+.|+.|+ +.| +++|+||+.        ...+..+++.+|+.    .+.    ....||++ .+..+++++|
T Consensus        86 ~~~~~~~~~l~~l~-~~g-~~~i~s~~~--------~~~~~~~l~~~~~~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~  155 (200)
T 3cnh_A           86 QPRPEVLALARDLG-QRY-RMYSLNNEG--------RDLNEYRIRTFGLGEFLLAFFTSSALGVMKPNPAMYRLGLTLAQ  155 (200)
T ss_dssp             CBCHHHHHHHHHHT-TTS-EEEEEECCC--------HHHHHHHHHHHTGGGTCSCEEEHHHHSCCTTCHHHHHHHHHHHT
T ss_pred             ccCccHHHHHHHHH-HcC-CEEEEeCCc--------HHHHHHHHHhCCHHHhcceEEeecccCCCCCCHHHHHHHHHHcC
Confidence            37899999999998 579 999999996        35567777788864    222    24679998 5789999999


Q ss_pred             CCCCcEEEEccCCcccHHHHHHcCCeEEEEcCC
Q 017982          272 CQSSQLIMVGDRPFTDIVYGNRNGFLTILTEPL  304 (363)
Q Consensus       272 l~pee~vmVGDrL~TDI~~A~raGi~TIlV~p~  304 (363)
                      ++|++++||||+. +||.+|+++|+.+++|...
T Consensus       156 ~~~~~~~~vgD~~-~Di~~a~~aG~~~~~~~~~  187 (200)
T 3cnh_A          156 VRPEEAVMVDDRL-QNVQAARAVGMHAVQCVDA  187 (200)
T ss_dssp             CCGGGEEEEESCH-HHHHHHHHTTCEEEECSCH
T ss_pred             CCHHHeEEeCCCH-HHHHHHHHCCCEEEEECCc
Confidence            9999999999999 7999999999999999754

>2x4d_A HLHPP, phospholysine phosphohistidine inorganic pyrophos phosphatase; hydrolase; 1.92A {Homo sapiens}

Probab=99.21  E-value=1.6e-10  Score=103.78  Aligned_cols=49  Identities=22%  Similarity=0.306  Sum_probs=44.9

Q ss_pred             cCCCch-hHHHHHHHhCCCCCcEEEEccCCcccHHHHHHcCCeEEEEcCC
Q 017982          256 VKKPAG-TAEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGFLTILTEPL  304 (363)
Q Consensus       256 ~kKP~p-~~~~alk~lgl~pee~vmVGDrL~TDI~~A~raGi~TIlV~p~  304 (363)
                      .+||.+ .+..+++++|++++++++|||+..+||.+|+.+|+.+++|..+
T Consensus       188 ~~kpk~~~~~~~~~~lgi~~~~~i~iGD~~~nDi~~a~~aG~~~~~v~~g  237 (271)
T 2x4d_A          188 VGKPSPEFFKSALQAIGVEAHQAVMIGDDIVGDVGGAQRCGMRALQVRTG  237 (271)
T ss_dssp             ESTTCHHHHHHHHHHHTCCGGGEEEEESCTTTTHHHHHHTTCEEEEESST
T ss_pred             ccCCCHHHHHHHHHHhCCCcceEEEECCCcHHHHHHHHHCCCcEEEEcCC
Confidence            378988 5789999999999999999999868999999999999999876

>3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium}

Probab=99.21  E-value=2.4e-11  Score=120.18  Aligned_cols=89  Identities=16%  Similarity=0.175  Sum_probs=75.7

Q ss_pred             cchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCeEEEc------------------ccCCCch-h
Q 017982          202 LWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKVIRH------------------RVKKPAG-T  262 (363)
Q Consensus       202 ~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~~I~~------------------~~kKP~p-~  262 (363)
                      ++|++.++|+.|+ +.|++++|+||+.        ...++.+++.+|+..++.                  ..+||.+ .
T Consensus       257 ~~pg~~e~l~~Lk-~~G~~~~ivS~~~--------~~~~~~~~~~lgl~~~~~~~l~~~dg~~tg~~~~~v~~~kpk~~~  327 (415)
T 3p96_A          257 LMPGARTTLRTLR-RLGYACGVVSGGF--------RRIIEPLAEELMLDYVAANELEIVDGTLTGRVVGPIIDRAGKATA  327 (415)
T ss_dssp             BCTTHHHHHHHHH-HTTCEEEEEEEEE--------HHHHHHHHHHTTCSEEEEECEEEETTEEEEEECSSCCCHHHHHHH
T ss_pred             cCccHHHHHHHHH-HCCCEEEEEcCCc--------HHHHHHHHHHcCccceeeeeEEEeCCEEEeeEccCCCCCcchHHH
Confidence            5788999999998 5899999999985        467788899999975421                  1167887 5


Q ss_pred             HHHHHHHhCCCCCcEEEEccCCcccHHHHHHcCCeEEE
Q 017982          263 AEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGFLTIL  300 (363)
Q Consensus       263 ~~~alk~lgl~pee~vmVGDrL~TDI~~A~raGi~TIl  300 (363)
                      +..+++++|++|++++||||+. +|+.+|+.+|+.+++
T Consensus       328 ~~~~~~~~gi~~~~~i~vGD~~-~Di~~a~~aG~~va~  364 (415)
T 3p96_A          328 LREFAQRAGVPMAQTVAVGDGA-NDIDMLAAAGLGIAF  364 (415)
T ss_dssp             HHHHHHHHTCCGGGEEEEECSG-GGHHHHHHSSEEEEE
T ss_pred             HHHHHHHcCcChhhEEEEECCH-HHHHHHHHCCCeEEE
Confidence            7899999999999999999999 899999999998776

>3smv_A S-(-)-azetidine-2-carboxylate hydrolase; haloacid dehalogenase superfamily, L-azetidine-2- carboxylate; HET: GOL; 1.38A {Pseudomonas}

Probab=99.20  E-value=4.9e-11  Score=104.52  Aligned_cols=96  Identities=13%  Similarity=0.178  Sum_probs=77.3

Q ss_pred             CCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCe--EEE----cccCCCch-hHHHH---HH
Q 017982          199 SLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK--VIR----HRVKKPAG-TAEEI---EK  268 (363)
Q Consensus       199 ~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~--~I~----~~~kKP~p-~~~~a---lk  268 (363)
                      ...++|++.+.|+.|+ + |++++|+||.+        ...+..+++.++..  .+.    ....||++ .+..+   ++
T Consensus        97 ~~~~~~~~~~~l~~l~-~-~~~~~i~tn~~--------~~~~~~~l~~l~~~fd~i~~~~~~~~~KP~~~~~~~~l~~~~  166 (240)
T 3smv_A           97 NWPAFPDTVEALQYLK-K-HYKLVILSNID--------RNEFKLSNAKLGVEFDHIITAQDVGSYKPNPNNFTYMIDALA  166 (240)
T ss_dssp             GCCBCTTHHHHHHHHH-H-HSEEEEEESSC--------HHHHHHHHTTTCSCCSEEEEHHHHTSCTTSHHHHHHHHHHHH
T ss_pred             cCCCCCcHHHHHHHHH-h-CCeEEEEeCCC--------hhHHHHHHHhcCCccCEEEEccccCCCCCCHHHHHHHHHHHH
Confidence            3467899999999998 4 78999999996        34555566666532  332    24679999 46777   88


Q ss_pred             HhCCCCCcEEEEccCCcccHHHHHHcCCeEEEEcCC
Q 017982          269 HFGCQSSQLIMVGDRPFTDIVYGNRNGFLTILTEPL  304 (363)
Q Consensus       269 ~lgl~pee~vmVGDrL~TDI~~A~raGi~TIlV~p~  304 (363)
                      ++|++|++++||||++.+||.+|+.+|+.+++|...
T Consensus       167 ~lgi~~~~~~~vGD~~~~Di~~a~~aG~~~~~~~~~  202 (240)
T 3smv_A          167 KAGIEKKDILHTAESLYHDHIPANDAGLVSAWIYRR  202 (240)
T ss_dssp             HTTCCGGGEEEEESCTTTTHHHHHHHTCEEEEECTT
T ss_pred             hcCCCchhEEEECCCchhhhHHHHHcCCeEEEEcCC
Confidence            999999999999999768999999999999999854

>3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis}

Probab=99.20  E-value=1.4e-11  Score=108.95  Aligned_cols=91  Identities=16%  Similarity=0.111  Sum_probs=71.7

Q ss_pred             CcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCe----EEE----cccCCCch-hHHHHHHHhC
Q 017982          201 TLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK----VIR----HRVKKPAG-TAEEIEKHFG  271 (363)
Q Consensus       201 ~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~----~I~----~~~kKP~p-~~~~alk~lg  271 (363)
                      .++|++.++|+.|+ +.|++++|+||+.          .+..+++.+|+.    .+.    ...+||.+ .+..+++++|
T Consensus        92 ~~~~~~~~~l~~l~-~~g~~~~i~t~~~----------~~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~lg  160 (233)
T 3nas_A           92 DLLPGIGRLLCQLK-NENIKIGLASSSR----------NAPKILRRLAIIDDFHAIVDPTTLAKGKPDPDIFLTAAAMLD  160 (233)
T ss_dssp             GSCTTHHHHHHHHH-HTTCEEEECCSCT----------THHHHHHHTTCTTTCSEECCC---------CCHHHHHHHHHT
T ss_pred             CcCcCHHHHHHHHH-HCCCcEEEEcCch----------hHHHHHHHcCcHhhcCEEeeHhhCCCCCCChHHHHHHHHHcC
Confidence            36899999999998 5799999999984          156677788764    222    24579998 6799999999


Q ss_pred             CCCCcEEEEccCCcccHHHHHHcCCeEEEEcC
Q 017982          272 CQSSQLIMVGDRPFTDIVYGNRNGFLTILTEP  303 (363)
Q Consensus       272 l~pee~vmVGDrL~TDI~~A~raGi~TIlV~p  303 (363)
                      ++|++++||||+. +||.+|+++|+.++++..
T Consensus       161 i~~~~~i~vGDs~-~Di~~a~~aG~~~~~~~~  191 (233)
T 3nas_A          161 VSPADCAAIEDAE-AGISAIKSAGMFAVGVGQ  191 (233)
T ss_dssp             SCGGGEEEEECSH-HHHHHHHHTTCEEEECC-
T ss_pred             CCHHHEEEEeCCH-HHHHHHHHcCCEEEEECC
Confidence            9999999999997 999999999999999974

>3dv9_A Beta-phosphoglucomutase; structural genomics, APC60149, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.72A {Bacteroides vulgatus}

Probab=99.20  E-value=5.2e-11  Score=105.60  Aligned_cols=98  Identities=14%  Similarity=0.115  Sum_probs=76.6

Q ss_pred             CCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCe------EEE----cccCCCch-hHHHHH
Q 017982          199 SLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK------VIR----HRVKKPAG-TAEEIE  267 (363)
Q Consensus       199 ~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~------~I~----~~~kKP~p-~~~~al  267 (363)
                      ...++|++.+.|+.|+ +.|++++|+||...        ..+...++. |+.      .+.    ...+||.+ .+..++
T Consensus       106 ~~~~~~~~~~~l~~l~-~~g~~~~i~t~~~~--------~~~~~~l~~-~l~~~f~~~~~~~~~~~~~~kp~~~~~~~~~  175 (247)
T 3dv9_A          106 KAERMPGALEVLTKIK-SEGLTPMVVTGSGQ--------TSLLDRLNH-NFPGIFQANLMVTAFDVKYGKPNPEPYLMAL  175 (247)
T ss_dssp             CCCBCTTHHHHHHHHH-HTTCEEEEECSCC-----------CHHHHHH-HSTTTCCGGGEECGGGCSSCTTSSHHHHHHH
T ss_pred             cCCCCCCHHHHHHHHH-HcCCcEEEEcCCch--------HHHHHHHHh-hHHHhcCCCeEEecccCCCCCCCCHHHHHHH
Confidence            3567899999999998 57999999999962        223333333 432      232    24679998 579999


Q ss_pred             HHhCCCCCcEEEEccCCcccHHHHHHcCCeEEEEcCCCCC
Q 017982          268 KHFGCQSSQLIMVGDRPFTDIVYGNRNGFLTILTEPLSLA  307 (363)
Q Consensus       268 k~lgl~pee~vmVGDrL~TDI~~A~raGi~TIlV~p~~~~  307 (363)
                      +++|++|++++||||+. +||.+|+++|+.+|+|..+...
T Consensus       176 ~~lg~~~~~~i~vGD~~-~Di~~a~~aG~~~i~v~~~~~~  214 (247)
T 3dv9_A          176 KKGGFKPNEALVIENAP-LGVQAGVAAGIFTIAVNTGPLH  214 (247)
T ss_dssp             HHHTCCGGGEEEEECSH-HHHHHHHHTTSEEEEECCSSSC
T ss_pred             HHcCCChhheEEEeCCH-HHHHHHHHCCCeEEEEcCCCCC
Confidence            99999999999999999 8999999999999999866543

>3kd3_A Phosphoserine phosphohydrolase-like protein; csgid, niaid, S genomics, national institute of allergy and infectious DISE (niaid); 1.70A {Francisella tularensis subsp}

Probab=99.20  E-value=4.6e-11  Score=103.25  Aligned_cols=93  Identities=18%  Similarity=0.246  Sum_probs=71.9

Q ss_pred             cchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCe---EE-----E--------cccCCCch-h-H
Q 017982          202 LWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK---VI-----R--------HRVKKPAG-T-A  263 (363)
Q Consensus       202 ~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~---~I-----~--------~~~kKP~p-~-~  263 (363)
                      ++|++.+.|+.|+ +.|++++|+||+.        ...++.+++.+|+.   ++     .        ....||.+ . +
T Consensus        83 ~~~~~~~~l~~l~-~~g~~~~i~s~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  153 (219)
T 3kd3_A           83 LTDGIKELVQDLK-NKGFEIWIFSGGL--------SESIQPFADYLNIPRENIFAVETIWNSDGSFKELDNSNGACDSKL  153 (219)
T ss_dssp             BCTTHHHHHHHHH-HTTCEEEEEEEEE--------HHHHHHHHHHHTCCGGGEEEEEEEECTTSBEEEEECTTSTTTCHH
T ss_pred             CChhHHHHHHHHH-HCCCeEEEEcCCc--------HHHHHHHHHHcCCCcccEEEeeeeecCCCceeccCCCCCCcccHH
Confidence            5677888899998 5799999999985        46677888888884   11     1        12367776 3 4


Q ss_pred             HHHHHHhCCCCCcEEEEccCCcccHHHHHHcCCeEEEEcCCC
Q 017982          264 EEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGFLTILTEPLS  305 (363)
Q Consensus       264 ~~alk~lgl~pee~vmVGDrL~TDI~~A~raGi~TIlV~p~~  305 (363)
                      ..+.+.+|+++++++||||+. +|+.++ ++|+.+++|....
T Consensus       154 ~~l~~~~~~~~~~~~~vGD~~-~Di~~~-~~G~~~~~v~~~~  193 (219)
T 3kd3_A          154 SAFDKAKGLIDGEVIAIGDGY-TDYQLY-EKGYATKFIAYME  193 (219)
T ss_dssp             HHHHHHGGGCCSEEEEEESSH-HHHHHH-HHTSCSEEEEECS
T ss_pred             HHHHHHhCCCCCCEEEEECCH-hHHHHH-hCCCCcEEEeccC
Confidence            556667799999999999998 799998 6899988886443

>2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii}

Probab=99.19  E-value=6.6e-11  Score=103.63  Aligned_cols=98  Identities=17%  Similarity=0.204  Sum_probs=79.7

Q ss_pred             cchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCe----EEE----cccCCCch-hHHHHHHHhCC
Q 017982          202 LWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK----VIR----HRVKKPAG-TAEEIEKHFGC  272 (363)
Q Consensus       202 ~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~----~I~----~~~kKP~p-~~~~alk~lgl  272 (363)
                      .+|++.+.|+.|+ +.|++++|+||.. .+.    ...+..+++.+|+.    .+.    ....||.+ .+..+++++|+
T Consensus       100 ~~~~~~~~l~~l~-~~g~~~~i~t~~~-~~~----~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~lgi  173 (235)
T 2om6_A          100 VLEGTKEALQFVK-ERGLKTAVIGNVM-FWP----GSYTRLLLERFGLMEFIDKTFFADEVLSYKPRKEMFEKVLNSFEV  173 (235)
T ss_dssp             BCTTHHHHHHHHH-HTTCEEEEEECCC-SSC----HHHHHHHHHHTTCGGGCSEEEEHHHHTCCTTCHHHHHHHHHHTTC
T ss_pred             cCccHHHHHHHHH-HCCCEEEEEcCCc-ccc----hhHHHHHHHhCCcHHHhhhheeccccCCCCCCHHHHHHHHHHcCC
Confidence            5899999999998 5799999999985 110    24556677777764    222    24579998 57899999999


Q ss_pred             CCCcEEEEccCCcccHHHHHHcCCeEEEEcCCC
Q 017982          273 QSSQLIMVGDRPFTDIVYGNRNGFLTILTEPLS  305 (363)
Q Consensus       273 ~pee~vmVGDrL~TDI~~A~raGi~TIlV~p~~  305 (363)
                      +|+++++|||+..+||.+|+.+|+.+++|..+.
T Consensus       174 ~~~~~~~iGD~~~nDi~~a~~aG~~~~~~~~~~  206 (235)
T 2om6_A          174 KPEESLHIGDTYAEDYQGARKVGMWAVWINQEG  206 (235)
T ss_dssp             CGGGEEEEESCTTTTHHHHHHTTSEEEEECTTC
T ss_pred             CccceEEECCChHHHHHHHHHCCCEEEEECCCC
Confidence            999999999998679999999999999998664

>2hx1_A Predicted sugar phosphatases of the HAD superfamily; ZP_00311070.1, possible sugar phosphatase, structural genomics; HET: MSE EPE; 2.10A {Cytophaga hutchinsonii}

Probab=99.19  E-value=8.5e-11  Score=109.09  Aligned_cols=99  Identities=23%  Similarity=0.259  Sum_probs=73.6

Q ss_pred             hHHHHHHHHHHhCCCeEEEEeCCCCCCC-CC--c---cHHHHHHHHHHhCCeEEEcccCCCch-hHHHHHHHh----CCC
Q 017982          205 PLSSSIEQCKSVFGHDIAVFSNSAGLYE-YD--N---DASKARKLEGKIGIKVIRHRVKKPAG-TAEEIEKHF----GCQ  273 (363)
Q Consensus       205 ~v~e~L~~Lk~~~Gikl~IVSN~~g~~~-~d--p---~~~~a~~i~~~LGi~~I~~~~kKP~p-~~~~alk~l----gl~  273 (363)
                      .....++.|+ +.|++ +|+||++.... ..  .   .......+...++...+  ..+||++ .|+.+++++    |++
T Consensus       149 ~~~~l~~~L~-~~g~~-~i~tn~~~~~~~~~~~~~~~~~~l~~~f~~~~~~~~~--~~~KP~p~~~~~a~~~l~~~~~~~  224 (284)
T 2hx1_A          149 DLNKTVNLLR-KRTIP-AIVANTDNTYPLTKTDVAIAIGGVATMIESILGRRFI--RFGKPDSQMFMFAYDMLRQKMEIS  224 (284)
T ss_dssp             HHHHHHHHHH-HCCCC-EEEECCCSEEECSSSCEEECHHHHHHHHHHHHCSCEE--EESTTSSHHHHHHHHHHHTTSCCC
T ss_pred             cHHHHHHHHh-cCCCe-EEEECCCccccCcCCCccccCChHHHHHHHHhCCcee--EecCCCHHHHHHHHHHHhhccCCC
Confidence            3344444676 57999 99999975433 11  1   12333445555665554  3689999 579999999    999


Q ss_pred             CCcEEEEccCCcccHHHHHHcCCeEEEEcCCCCC
Q 017982          274 SSQLIMVGDRPFTDIVYGNRNGFLTILTEPLSLA  307 (363)
Q Consensus       274 pee~vmVGDrL~TDI~~A~raGi~TIlV~p~~~~  307 (363)
                      |++++||||++.+||.+|+++|+.+|+|..+...
T Consensus       225 ~~~~~~VGD~~~~Di~~A~~aG~~~i~v~~g~~~  258 (284)
T 2hx1_A          225 KREILMVGDTLHTDILGGNKFGLDTALVLTGNTR  258 (284)
T ss_dssp             GGGEEEEESCTTTHHHHHHHHTCEEEEESSSSSC
T ss_pred             cceEEEECCCcHHHHHHHHHcCCeEEEECCCCCC
Confidence            9999999999879999999999999999876644

>1rku_A Homoserine kinase; phosphoserine phosphatase, phosphoserine:homoserine phosphotransferase, THRH, phosphoserine phosphoryl donor; 1.47A {Pseudomonas aeruginosa} SCOP: c.108.1.11 PDB: 1rkv_A

Probab=99.18  E-value=5.3e-11  Score=104.11  Aligned_cols=90  Identities=10%  Similarity=0.067  Sum_probs=71.9

Q ss_pred             CCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCeEE-----Ec--cc-----CCCch-hHHHH
Q 017982          200 LTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKVI-----RH--RV-----KKPAG-TAEEI  266 (363)
Q Consensus       200 ~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~~I-----~~--~~-----kKP~p-~~~~a  266 (363)
                      ..++|++.++|+.|+ +. ++++|+||+.        ...++.+++.+|+..+     ..  ..     +||.| .+..+
T Consensus        68 ~~~~~g~~~~l~~l~-~~-~~~~i~s~~~--------~~~~~~~l~~~gl~~~f~~~~~~~~~~~~~~~~~p~p~~~~~~  137 (206)
T 1rku_A           68 LKPLEGAVEFVDWLR-ER-FQVVILSDTF--------YEFSQPLMRQLGFPTLLCHKLEIDDSDRVVGYQLRQKDPKRQS  137 (206)
T ss_dssp             CCCCTTHHHHHHHHH-TT-SEEEEEEEEE--------HHHHHHHHHHTTCCCEEEEEEEECTTSCEEEEECCSSSHHHHH
T ss_pred             cCCCccHHHHHHHHH-hc-CcEEEEECCh--------HHHHHHHHHHcCCcceecceeEEcCCceEEeeecCCCchHHHH
Confidence            346889999999998 45 8999999995        3667788888887621     11  11     24777 56889


Q ss_pred             HHHhCCCCCcEEEEccCCcccHHHHHHcCCeEEE
Q 017982          267 EKHFGCQSSQLIMVGDRPFTDIVYGNRNGFLTIL  300 (363)
Q Consensus       267 lk~lgl~pee~vmVGDrL~TDI~~A~raGi~TIl  300 (363)
                      ++++++.+++++||||+. +|+.+|+++|+.+++
T Consensus       138 l~~l~~~~~~~~~iGD~~-~Di~~a~~aG~~~~~  170 (206)
T 1rku_A          138 VIAFKSLYYRVIAAGDSY-NDTTMLSEAHAGILF  170 (206)
T ss_dssp             HHHHHHTTCEEEEEECSS-TTHHHHHHSSEEEEE
T ss_pred             HHHHHhcCCEEEEEeCCh-hhHHHHHhcCccEEE
Confidence            999999999999999998 899999999998653

>2i6x_A Hydrolase, haloacid dehalogenase-like family; HAD superfamily, struct genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Porphyromonas gingivalis}

Probab=99.18  E-value=2.2e-11  Score=106.21  Aligned_cols=94  Identities=14%  Similarity=0.144  Sum_probs=77.8

Q ss_pred             CcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHH------hCCe----EEE----cccCCCch-hHHH
Q 017982          201 TLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGK------IGIK----VIR----HRVKKPAG-TAEE  265 (363)
Q Consensus       201 ~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~------LGi~----~I~----~~~kKP~p-~~~~  265 (363)
                      .++|++.++|+.|+ + |++++|+||+.        ...+..+++.      +|+.    .+.    .+..||.+ .+..
T Consensus        89 ~~~~~~~~~l~~l~-~-g~~~~i~t~~~--------~~~~~~~~~~l~~~~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~~  158 (211)
T 2i6x_A           89 EISAEKFDYIDSLR-P-DYRLFLLSNTN--------PYVLDLAMSPRFLPSGRTLDSFFDKVYASCQMGKYKPNEDIFLE  158 (211)
T ss_dssp             EECHHHHHHHHHHT-T-TSEEEEEECCC--------HHHHHHHTSTTSSTTCCCGGGGSSEEEEHHHHTCCTTSHHHHHH
T ss_pred             ccChHHHHHHHHHH-c-CCeEEEEeCCC--------HHHHHHHHhhhccccccCHHHHcCeEEeecccCCCCCCHHHHHH
Confidence            35799999999998 5 99999999986        3456666666      5653    232    24689998 5789


Q ss_pred             HHHHhCCCCCcEEEEccCCcccHHHHHHcCCeEEEEcCCC
Q 017982          266 IEKHFGCQSSQLIMVGDRPFTDIVYGNRNGFLTILTEPLS  305 (363)
Q Consensus       266 alk~lgl~pee~vmVGDrL~TDI~~A~raGi~TIlV~p~~  305 (363)
                      +++++|++|++++||||+. .||.+|+++|+.++++....
T Consensus       159 ~~~~~~~~~~~~~~igD~~-~Di~~a~~aG~~~~~~~~~~  197 (211)
T 2i6x_A          159 MIADSGMKPEETLFIDDGP-ANVATAERLGFHTYCPDNGE  197 (211)
T ss_dssp             HHHHHCCCGGGEEEECSCH-HHHHHHHHTTCEEECCCTTC
T ss_pred             HHHHhCCChHHeEEeCCCH-HHHHHHHHcCCEEEEECCHH
Confidence            9999999999999999999 69999999999999998654

>2hsz_A Novel predicted phosphatase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: UNL; 1.90A {Haemophilus somnus 129PT} SCOP: c.108.1.6

Probab=99.18  E-value=1.3e-10  Score=105.15  Aligned_cols=96  Identities=21%  Similarity=0.237  Sum_probs=81.1

Q ss_pred             CCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCe----EEE----cccCCCch-hHHHHHHHh
Q 017982          200 LTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK----VIR----HRVKKPAG-TAEEIEKHF  270 (363)
Q Consensus       200 ~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~----~I~----~~~kKP~p-~~~~alk~l  270 (363)
                      ..++|++.++|+.|+ +.|++++|+||..        ...++.+++.+|+.    .+.    ....||.+ .+..+++++
T Consensus       113 ~~~~~~~~~~l~~l~-~~g~~~~i~t~~~--------~~~~~~~l~~~gl~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~  183 (243)
T 2hsz_A          113 SRLYPNVKETLEALK-AQGYILAVVTNKP--------TKHVQPILTAFGIDHLFSEMLGGQSLPEIKPHPAPFYYLCGKF  183 (243)
T ss_dssp             CEECTTHHHHHHHHH-HTTCEEEEECSSC--------HHHHHHHHHHTTCGGGCSEEECTTTSSSCTTSSHHHHHHHHHH
T ss_pred             CccCCCHHHHHHHHH-HCCCEEEEEECCc--------HHHHHHHHHHcCchheEEEEEecccCCCCCcCHHHHHHHHHHh
Confidence            456899999999998 5799999999996        35677888888864    232    23579988 578999999


Q ss_pred             CCCCCcEEEEccCCcccHHHHHHcCCeEEEEcCCC
Q 017982          271 GCQSSQLIMVGDRPFTDIVYGNRNGFLTILTEPLS  305 (363)
Q Consensus       271 gl~pee~vmVGDrL~TDI~~A~raGi~TIlV~p~~  305 (363)
                      |+++++++||||+. +||.+|+++|+.+++|..+.
T Consensus       184 ~~~~~~~~~vGD~~-~Di~~a~~aG~~~i~v~~g~  217 (243)
T 2hsz_A          184 GLYPKQILFVGDSQ-NDIFAAHSAGCAVVGLTYGY  217 (243)
T ss_dssp             TCCGGGEEEEESSH-HHHHHHHHHTCEEEEESSSC
T ss_pred             CcChhhEEEEcCCH-HHHHHHHHCCCeEEEEcCCC
Confidence            99999999999998 89999999999999998653

>2g80_A Protein UTR4; YEL038W, UTR4 protein (unknown transcript 4 protein), struct genomics, PSI, protein structure initiative; 2.28A {Saccharomyces cerevisiae} SCOP: c.108.1.22

Probab=99.17  E-value=8.9e-11  Score=109.74  Aligned_cols=90  Identities=17%  Similarity=0.255  Sum_probs=73.0

Q ss_pred             CCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHh--C-------------CeEEE---cccCCCch
Q 017982          200 LTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKI--G-------------IKVIR---HRVKKPAG  261 (363)
Q Consensus       200 ~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~L--G-------------i~~I~---~~~kKP~p  261 (363)
                      ..++|++.+.|+.     |++++|+||+.        ...++.+++.+  |             +..++   ....||+|
T Consensus       124 ~~~~pgv~e~L~~-----g~~l~i~Tn~~--------~~~~~~~l~~~~~g~~~~~~~l~l~~~~~~~f~~~~~g~KP~p  190 (253)
T 2g80_A          124 APVYADAIDFIKR-----KKRVFIYSSGS--------VKAQKLLFGYVQDPNAPAHDSLDLNSYIDGYFDINTSGKKTET  190 (253)
T ss_dssp             BCCCHHHHHHHHH-----CSCEEEECSSC--------HHHHHHHHHSBCCTTCTTSCCBCCGGGCCEEECHHHHCCTTCH
T ss_pred             CCCCCCHHHHHHc-----CCEEEEEeCCC--------HHHHHHHHHhhcccccccccccchHhhcceEEeeeccCCCCCH
Confidence            3568999888865     89999999996        34566666665  5             44333   11369999


Q ss_pred             -hHHHHHHHhCCCCCcEEEEccCCcccHHHHHHcCCeEEEEcC
Q 017982          262 -TAEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGFLTILTEP  303 (363)
Q Consensus       262 -~~~~alk~lgl~pee~vmVGDrL~TDI~~A~raGi~TIlV~p  303 (363)
                       .|..+++++|++|++|+||||+. .||.+|+++||.+|+|..
T Consensus       191 ~~~~~a~~~lg~~p~~~l~vgDs~-~di~aA~~aG~~~i~v~~  232 (253)
T 2g80_A          191 QSYANILRDIGAKASEVLFLSDNP-LELDAAAGVGIATGLASR  232 (253)
T ss_dssp             HHHHHHHHHHTCCGGGEEEEESCH-HHHHHHHTTTCEEEEECC
T ss_pred             HHHHHHHHHcCCCcccEEEEcCCH-HHHHHHHHcCCEEEEEcC
Confidence             67999999999999999999998 799999999999999974

>3qxg_A Inorganic pyrophosphatase; hydrolase, magnesium binding site, NEW YORK research center for structural genomics; HET: TLA; 1.24A {Bacteroides thetaiotaomicron} PDB: 3qu2_A* 3qx7_A 3quq_A* 3r9k_A 3qut_A 3qu9_A* 3qu7_A 3qu5_A 3qyp_A 3quc_A 3qub_A 3qu4_A

Probab=99.17  E-value=8.3e-11  Score=105.21  Aligned_cols=98  Identities=14%  Similarity=0.133  Sum_probs=77.7

Q ss_pred             CCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCC------eEEE----cccCCCch-hHHHHH
Q 017982          199 SLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGI------KVIR----HRVKKPAG-TAEEIE  267 (363)
Q Consensus       199 ~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi------~~I~----~~~kKP~p-~~~~al  267 (363)
                      ...++|++.++|+.|+ +.|++++|+||...        ..+...++. |+      +.+.    ....||.+ .+..++
T Consensus       107 ~~~~~~~~~~~l~~l~-~~g~~~~i~t~~~~--------~~~~~~l~~-~l~~~f~~d~i~~~~~~~~~kp~~~~~~~~~  176 (243)
T 3qxg_A          107 EAERMPGAWELLQKVK-SEGLTPMVVTGSGQ--------LSLLERLEH-NFPGMFHKELMVTAFDVKYGKPNPEPYLMAL  176 (243)
T ss_dssp             CCCBCTTHHHHHHHHH-HTTCEEEEECCCCC--------HHHHTTHHH-HSTTTCCGGGEECTTTCSSCTTSSHHHHHHH
T ss_pred             cCCCCCCHHHHHHHHH-HcCCcEEEEeCCcH--------HHHHHHHHH-hHHHhcCcceEEeHHhCCCCCCChHHHHHHH
Confidence            3457899999999998 57999999999962        333333333 43      2232    24679998 679999


Q ss_pred             HHhCCCCCcEEEEccCCcccHHHHHHcCCeEEEEcCCCCC
Q 017982          268 KHFGCQSSQLIMVGDRPFTDIVYGNRNGFLTILTEPLSLA  307 (363)
Q Consensus       268 k~lgl~pee~vmVGDrL~TDI~~A~raGi~TIlV~p~~~~  307 (363)
                      +++|++|++++||||+. +||.+|+.+|+.+|+|..+...
T Consensus       177 ~~lg~~~~~~i~vGD~~-~Di~~a~~aG~~~i~v~~~~~~  215 (243)
T 3qxg_A          177 KKGGLKADEAVVIENAP-LGVEAGHKAGIFTIAVNTGPLD  215 (243)
T ss_dssp             HHTTCCGGGEEEEECSH-HHHHHHHHTTCEEEEECCSSSC
T ss_pred             HHcCCCHHHeEEEeCCH-HHHHHHHHCCCEEEEEeCCCCC
Confidence            99999999999999998 8999999999999999866533

>2c4n_A Protein NAGD; nucleotide phosphatase, HAD superfamily, UMP phosphatase, carbohydrate metabolism, hydrolase; 1.8A {Escherichia coli} SCOP: c.108.1.14

Probab=99.16  E-value=3.7e-10  Score=99.46  Aligned_cols=52  Identities=29%  Similarity=0.339  Sum_probs=46.0

Q ss_pred             cCCCch-hHHHHHHHhCCCCCcEEEEccCCcccHHHHHHcCCeEEEEcCCCCC
Q 017982          256 VKKPAG-TAEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGFLTILTEPLSLA  307 (363)
Q Consensus       256 ~kKP~p-~~~~alk~lgl~pee~vmVGDrL~TDI~~A~raGi~TIlV~p~~~~  307 (363)
                      .+||.+ .+..+++++|++++++++|||++.+||.+|+.+|+.+++|..+...
T Consensus       174 ~~kpk~~~~~~~~~~lgi~~~~~i~iGD~~~nDi~~~~~aG~~~~~v~~g~~~  226 (250)
T 2c4n_A          174 VGKPSPWIIRAALNKMQAHSEETVIVGDNLRTDILAGFQAGLETILVLSGVSS  226 (250)
T ss_dssp             CSTTSTHHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHTTCEEEEESSSSCC
T ss_pred             eCCCCHHHHHHHHHHcCCCcceEEEECCCchhHHHHHHHcCCeEEEECCCCCC
Confidence            478888 5789999999999999999999548999999999999999876544

>3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis}

Probab=99.16  E-value=1.3e-10  Score=103.21  Aligned_cols=88  Identities=8%  Similarity=-0.006  Sum_probs=69.2

Q ss_pred             cchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCeEEEc---------ccCC---------Cch-h
Q 017982          202 LWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKVIRH---------RVKK---------PAG-T  262 (363)
Q Consensus       202 ~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~~I~~---------~~kK---------P~p-~  262 (363)
                      ++|++.+.|+.|+ +.|++++|+||+.        ...++.+++.+|++.++.         ..+|         +.+ .
T Consensus        93 ~~~g~~~~l~~l~-~~g~~~~ivS~~~--------~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~K~~~  163 (232)
T 3fvv_A           93 LTVQAVDVVRGHL-AAGDLCALVTATN--------SFVTAPIARAFGVQHLIATDPEYRDGRYTGRIEGTPSFREGKVVR  163 (232)
T ss_dssp             CCHHHHHHHHHHH-HTTCEEEEEESSC--------HHHHHHHHHHTTCCEEEECEEEEETTEEEEEEESSCSSTHHHHHH
T ss_pred             cCHHHHHHHHHHH-HCCCEEEEEeCCC--------HHHHHHHHHHcCCCEEEEcceEEECCEEeeeecCCCCcchHHHHH
Confidence            4789999999998 5799999999996        467888999999863210         0112         112 2


Q ss_pred             HHHHHHHhC---CCCCcEEEEccCCcccHHHHHHcCCeEE
Q 017982          263 AEEIEKHFG---CQSSQLIMVGDRPFTDIVYGNRNGFLTI  299 (363)
Q Consensus       263 ~~~alk~lg---l~pee~vmVGDrL~TDI~~A~raGi~TI  299 (363)
                      +..+++.+|   ++|++|+||||+. +|+.+++.+|+..+
T Consensus       164 ~~~~~~~~~~~~~~~~~~~~vGDs~-~D~~~~~~ag~~~~  202 (232)
T 3fvv_A          164 VNQWLAGMGLALGDFAESYFYSDSV-NDVPLLEAVTRPIA  202 (232)
T ss_dssp             HHHHHHHTTCCGGGSSEEEEEECCG-GGHHHHHHSSEEEE
T ss_pred             HHHHHHHcCCCcCchhheEEEeCCH-hhHHHHHhCCCeEE
Confidence            567888899   9999999999999 89999999997654

>1ltq_A Polynucleotide kinase; phosphatase, alpha/beta, P-loop, transferase; HET: ADP; 2.33A {Enterobacteria phage T4} SCOP: c.108.1.9 c.37.1.1 PDB: 1rc8_A* 1rpz_A* 1rrc_A* 2ia5_A

Probab=99.16  E-value=7.9e-11  Score=110.55  Aligned_cols=114  Identities=18%  Similarity=0.110  Sum_probs=85.3

Q ss_pred             CEEEEcCCceeecCCC-----------CCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHH------
Q 017982          184 KGVVFDKDNTLTAPYS-----------LTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGK------  246 (363)
Q Consensus       184 kaVV~DlDnTL~~~~~-----------~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~------  246 (363)
                      +.+++|.|+|+.....           ..++|++.+.|+.|+ +.|++++|+||+.....     ..+..+++.      
T Consensus       160 ~~i~iD~dgtl~~~~~~~~~~~~~~~~~~~~~g~~e~L~~L~-~~g~~~~v~T~k~~~~~-----~~~~~~l~~~~~~~~  233 (301)
T 1ltq_A          160 KAVIFDVDGTLAKMNGRGPYDLEKCDTDVINPMVVELSKMYA-LMGYQIVVVSGRESGTK-----EDPTKYYRMTRKWVE  233 (301)
T ss_dssp             EEEEEETBTTTBCCSSCCTTCGGGGGGCCBCHHHHHHHHHHH-HTTCEEEEEECSCCCCS-----SSTTHHHHHHHHHHH
T ss_pred             ceEEEeCCCCcccccCCCchhhhhccccCCChHHHHHHHHHH-HCCCeEEEEeCCCcccc-----hhHHHHHHhcccccc
Confidence            6788999999754222           235899999999998 58999999999974211     122344444      


Q ss_pred             --hCCeE--EE---cccCCCch-hHHHHHHHhCCCCCc-EEEEccCCcccHHHHHHcCCeEEEEcCC
Q 017982          247 --IGIKV--IR---HRVKKPAG-TAEEIEKHFGCQSSQ-LIMVGDRPFTDIVYGNRNGFLTILTEPL  304 (363)
Q Consensus       247 --LGi~~--I~---~~~kKP~p-~~~~alk~lgl~pee-~vmVGDrL~TDI~~A~raGi~TIlV~p~  304 (363)
                        +|+.+  +.   ....||+| .+..++++++..+.+ ++||||+. .||.+|+++|+.+|.|..+
T Consensus       234 ~~~~~~~~~~~~~~~~~~kp~p~~~~~~~~~~~~~~~~~~~~vgD~~-~di~~a~~aG~~~~~v~~G  299 (301)
T 1ltq_A          234 DIAGVPLVMQCQREQGDTRKDDVVKEEIFWKHIAPHFDVKLAIDDRT-QVVEMWRRIGVECWQVASG  299 (301)
T ss_dssp             HTTCCCCSEEEECCTTCCSCHHHHHHHHHHHHTTTTCEEEEEEECCH-HHHHHHHHTTCCEEECSCC
T ss_pred             cccCCCchheeeccCCCCcHHHHHHHHHHHHHhccccceEEEeCCcH-HHHHHHHHcCCeEEEecCC
Confidence              67752  32   12468998 467888999887755 69999998 8999999999999999765

>1qyi_A ZR25, hypothetical protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.50A {Staphylococcus aureus subsp} SCOP: c.108.1.13

Probab=99.14  E-value=9.4e-11  Score=116.80  Aligned_cols=96  Identities=15%  Similarity=0.122  Sum_probs=80.7

Q ss_pred             CCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCe------EEEc----c-----------cCC
Q 017982          200 LTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK------VIRH----R-----------VKK  258 (363)
Q Consensus       200 ~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~------~I~~----~-----------~kK  258 (363)
                      ..++|++.++|+.|+ +.|++++|+||+.        ...++.+++.+|+.      .+..    .           .+|
T Consensus       214 ~~l~pGv~elL~~Lk-~~Gi~laIvTn~~--------~~~~~~~L~~lgL~~~Fd~~~Ivs~ddv~~~~~~~~~~kp~~K  284 (384)
T 1qyi_A          214 LRPVDEVKVLLNDLK-GAGFELGIATGRP--------YTETVVPFENLGLLPYFEADFIATASDVLEAENMYPQARPLGK  284 (384)
T ss_dssp             SSCHHHHHHHHHHHH-HTTCEEEEECSSC--------HHHHHHHHHHHTCGGGSCGGGEECHHHHHHHHHHSTTSCCCCT
T ss_pred             CCcCcCHHHHHHHHH-hCCCEEEEEeCCc--------HHHHHHHHHHcCChHhcCCCEEEecccccccccccccccCCCC
Confidence            457899999999998 5799999999996        35677788888874      2321    1           279


Q ss_pred             Cch-hHHHHHHHhC--------------CCCCcEEEEccCCcccHHHHHHcCCeEEEEcCCC
Q 017982          259 PAG-TAEEIEKHFG--------------CQSSQLIMVGDRPFTDIVYGNRNGFLTILTEPLS  305 (363)
Q Consensus       259 P~p-~~~~alk~lg--------------l~pee~vmVGDrL~TDI~~A~raGi~TIlV~p~~  305 (363)
                      |+| .+..+++.+|              ++|++|+||||+. +||.+|+++||.+|+|..+.
T Consensus       285 P~P~~~~~a~~~lg~~~~~~~~~~~~~~v~p~e~l~VGDs~-~Di~aAk~AG~~~I~V~~g~  345 (384)
T 1qyi_A          285 PNPFSYIAALYGNNRDKYESYINKQDNIVNKDDVFIVGDSL-ADLLSAQKIGATFIGTLTGL  345 (384)
T ss_dssp             TSTHHHHHHHHCCCGGGHHHHHHCCTTCSCTTTEEEEESSH-HHHHHHHHHTCEEEEESCBT
T ss_pred             CCHHHHHHHHHHcCCccccccccccccCCCCcCeEEEcCCH-HHHHHHHHcCCEEEEECCCc
Confidence            999 5788999999              8999999999999 89999999999999998654

>2zg6_A Putative uncharacterized protein ST2620, probable 2-haloalkanoic; probable 2-haloalkanoic acid dehalogenase, hydrolase, structural genomics; 2.40A {Sulfolobus tokodaii}

Probab=99.14  E-value=1.9e-11  Score=108.77  Aligned_cols=92  Identities=22%  Similarity=0.228  Sum_probs=72.1

Q ss_pred             CcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCe----EEE----cccCCCch-hHHHHHHHhC
Q 017982          201 TLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK----VIR----HRVKKPAG-TAEEIEKHFG  271 (363)
Q Consensus       201 ~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~----~I~----~~~kKP~p-~~~~alk~lg  271 (363)
                      .++|++.++|+.|+ +.|++++|+||+.         ..+..+++.+|+.    .+.    ....||++ .+..+++++|
T Consensus        95 ~~~~~~~~~l~~l~-~~g~~~~i~Tn~~---------~~~~~~l~~~gl~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~  164 (220)
T 2zg6_A           95 FLYDDTLEFLEGLK-SNGYKLALVSNAS---------PRVKTLLEKFDLKKYFDALALSYEIKAVKPNPKIFGFALAKVG  164 (220)
T ss_dssp             EECTTHHHHHHHHH-TTTCEEEECCSCH---------HHHHHHHHHHTCGGGCSEEC-----------CCHHHHHHHHHC
T ss_pred             eECcCHHHHHHHHH-HCCCEEEEEeCCc---------HHHHHHHHhcCcHhHeeEEEeccccCCCCCCHHHHHHHHHHcC
Confidence            46899999999998 5799999999994         2467788888875    222    24579998 6789999999


Q ss_pred             CCCCcEEEEccCCcccHHHHHHcCCeEEEEcCCC
Q 017982          272 CQSSQLIMVGDRPFTDIVYGNRNGFLTILTEPLS  305 (363)
Q Consensus       272 l~pee~vmVGDrL~TDI~~A~raGi~TIlV~p~~  305 (363)
                      ++|   +||||+..+||.+|+++|+.+|+|.+..
T Consensus       165 ~~~---~~vgD~~~~Di~~a~~aG~~~i~v~~~~  195 (220)
T 2zg6_A          165 YPA---VHVGDIYELDYIGAKRSYVDPILLDRYD  195 (220)
T ss_dssp             SSE---EEEESSCCCCCCCSSSCSEEEEEBCTTS
T ss_pred             CCe---EEEcCCchHhHHHHHHCCCeEEEECCCC
Confidence            998   9999999669999999999999998653

>2jc9_A Cytosolic purine 5'-nucleotidase; cytosolic 5-prime nucleotidase II, GMP-IMP specific nucleotidase, CN-II, NT5C2, hydrolase, polymorphism; HET: ADN; 1.5A {Homo sapiens} PDB: 2j2c_A* 2xje_A* 2xjf_A* 2jcm_A* 2xcw_A* 2xcv_A* 2xcx_A 2xjb_A* 2xjc_A* 2xjd_A*

Probab=99.13  E-value=1.5e-10  Score=119.99  Aligned_cols=97  Identities=24%  Similarity=0.341  Sum_probs=82.0

Q ss_pred             cchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHh-CC-----------------eEEEcccCCCch-h
Q 017982          202 LWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKI-GI-----------------KVIRHRVKKPAG-T  262 (363)
Q Consensus       202 ~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~L-Gi-----------------~~I~~~~kKP~p-~  262 (363)
                      ..|++..||++|+ +.| +++|+||+.        ...+..++..+ |+                 ++|...++||.. .
T Consensus       247 kdp~l~~~L~~Lr-~~G-KlfLiTNS~--------~~yv~~~m~yllg~~~~~~~~~~~~dWrdlFD~vI~~A~KP~FF~  316 (555)
T 2jc9_A          247 KDGKLPLLLSRMK-EVG-KVFLATNSD--------YKYTDKIMTYLFDFPHGPKPGSSHRPWQSYFDLILVDARKPLFFG  316 (555)
T ss_dssp             CCTHHHHHHHHHH-HHS-EEEEECSSC--------HHHHHHHHHHHTCSSSSSSTTSCCCCGGGGCSEEEESCCTTGGGT
T ss_pred             CChHHHHHHHHHH-HcC-CEEEEeCCC--------hHHHHHHHHHhcCCCccccccccccchhhhCCEEEEeCCCCCccc
Confidence            3578999999999 579 999999996        47788888776 75                 344457789984 3


Q ss_pred             ----------------------------------HHHHHHHhCCCCCcEEEEccCCcccHHHHH-HcCCeEEEEcCCCCC
Q 017982          263 ----------------------------------AEEIEKHFGCQSSQLIMVGDRPFTDIVYGN-RNGFLTILTEPLSLA  307 (363)
Q Consensus       263 ----------------------------------~~~alk~lgl~pee~vmVGDrL~TDI~~A~-raGi~TIlV~p~~~~  307 (363)
                                                        +..+++.+|++.++++||||++++||.+|+ ++|++|++|.|.-..
T Consensus       317 ~~~pfr~Vd~~tg~l~~~~~~~~l~~g~vY~gGn~~~~~~llg~~g~eVLYVGDhIftDIl~~kk~~GWrTiLViPELe~  396 (555)
T 2jc9_A          317 EGTVLRQVDTKTGKLKIGTYTGPLQHGIVYSGGSSDTICDLLGAKGKDILYIGDHIFGDILKSKKRQGWRTFLVIPELAQ  396 (555)
T ss_dssp             TCCCEEEEETTTTEECSSCCCSCCCTTCCEEECCHHHHHHHHTCCGGGEEEEESCCCCCCHHHHHHHCCEEEEECTTHHH
T ss_pred             CCCcceEeecCCCccccccccccccCCceeccCCHHHHHHHhCCCCCeEEEECCEehHhHHhHHhhcCeEEEEEEechhh
Confidence                                              478999999999999999999999999998 999999999997654


Q ss_pred             C
Q 017982          308 E  308 (363)
Q Consensus       308 ~  308 (363)
                      +
T Consensus       397 E  397 (555)
T 2jc9_A          397 E  397 (555)
T ss_dssp             H
T ss_pred             h
Confidence            3

>2hdo_A Phosphoglycolate phosphatase; NP_784602.1, structur genomics, PSI-2, protein structure initiative, joint center structural genomics; HET: MSE; 1.50A {Lactobacillus plantarum} SCOP: c.108.1.6

Probab=99.12  E-value=7.7e-11  Score=102.84  Aligned_cols=95  Identities=12%  Similarity=0.044  Sum_probs=78.7

Q ss_pred             CCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCe----EEE----cccCCCch-hHHHHHHHh
Q 017982          200 LTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK----VIR----HRVKKPAG-TAEEIEKHF  270 (363)
Q Consensus       200 ~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~----~I~----~~~kKP~p-~~~~alk~l  270 (363)
                      ..++|++.+.|+.|+ +. ++++|+||+.        ...++.+++.+|+.    .+.    .+..||++ .+..+++++
T Consensus        82 ~~~~~~~~~~l~~l~-~~-~~~~i~s~~~--------~~~~~~~l~~~~l~~~f~~~~~~~~~~~~KP~~~~~~~~~~~~  151 (209)
T 2hdo_A           82 IELYPGITSLFEQLP-SE-LRLGIVTSQR--------RNELESGMRSYPFMMRMAVTISADDTPKRKPDPLPLLTALEKV  151 (209)
T ss_dssp             CEECTTHHHHHHHSC-TT-SEEEEECSSC--------HHHHHHHHTTSGGGGGEEEEECGGGSSCCTTSSHHHHHHHHHT
T ss_pred             CCcCCCHHHHHHHHH-hc-CcEEEEeCCC--------HHHHHHHHHHcChHhhccEEEecCcCCCCCCCcHHHHHHHHHc
Confidence            456899999999998 46 8999999996        35677778888764    232    24579998 578999999


Q ss_pred             CCCCCcEEEEccCCcccHHHHHHcCCeEEEEcCCC
Q 017982          271 GCQSSQLIMVGDRPFTDIVYGNRNGFLTILTEPLS  305 (363)
Q Consensus       271 gl~pee~vmVGDrL~TDI~~A~raGi~TIlV~p~~  305 (363)
                      |++|++++||||+. +||.+|+++|+.++++..+.
T Consensus       152 ~~~~~~~i~vGD~~-~Di~~a~~aG~~~~~~~~~~  185 (209)
T 2hdo_A          152 NVAPQNALFIGDSV-SDEQTAQAANVDFGLAVWGM  185 (209)
T ss_dssp             TCCGGGEEEEESSH-HHHHHHHHHTCEEEEEGGGC
T ss_pred             CCCcccEEEECCCh-hhHHHHHHcCCeEEEEcCCC
Confidence            99999999999995 89999999999999998443

>2pke_A Haloacid delahogenase-like family hydrolase; NP_639141.1, ST genomics, joint center for structural genomics, JCSG; 1.81A {Xanthomonas campestris PV}

Probab=99.10  E-value=2e-10  Score=103.42  Aligned_cols=95  Identities=12%  Similarity=0.124  Sum_probs=78.6

Q ss_pred             CCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCe----EEEcccCCCch-hHHHHHHHhCCC
Q 017982          199 SLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK----VIRHRVKKPAG-TAEEIEKHFGCQ  273 (363)
Q Consensus       199 ~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~----~I~~~~kKP~p-~~~~alk~lgl~  273 (363)
                      ...++|++.+.|+.|+  .|++++|+||+.        ...+...++.+|+.    .+. ...||.+ .+..+++++|++
T Consensus       110 ~~~~~~~~~~~l~~l~--~~~~~~i~t~~~--------~~~~~~~l~~~~l~~~f~~i~-~~~kp~~~~~~~~~~~l~~~  178 (251)
T 2pke_A          110 PVEVIAGVREAVAAIA--ADYAVVLITKGD--------LFHQEQKIEQSGLSDLFPRIE-VVSEKDPQTYARVLSEFDLP  178 (251)
T ss_dssp             CCCBCTTHHHHHHHHH--TTSEEEEEEESC--------HHHHHHHHHHHSGGGTCCCEE-EESCCSHHHHHHHHHHHTCC
T ss_pred             cCCcCccHHHHHHHHH--CCCEEEEEeCCC--------HHHHHHHHHHcCcHHhCceee-eeCCCCHHHHHHHHHHhCcC
Confidence            3456899999999997  489999999986        34566777777764    222 2479998 578999999999


Q ss_pred             CCcEEEEccCCcccHHHHHHcCCeEEEEcCC
Q 017982          274 SSQLIMVGDRPFTDIVYGNRNGFLTILTEPL  304 (363)
Q Consensus       274 pee~vmVGDrL~TDI~~A~raGi~TIlV~p~  304 (363)
                      |++++||||+..+||.+|+++|+.+++|..+
T Consensus       179 ~~~~i~iGD~~~~Di~~a~~aG~~~~~v~~~  209 (251)
T 2pke_A          179 AERFVMIGNSLRSDVEPVLAIGGWGIYTPYA  209 (251)
T ss_dssp             GGGEEEEESCCCCCCHHHHHTTCEEEECCCC
T ss_pred             chhEEEECCCchhhHHHHHHCCCEEEEECCC
Confidence            9999999999867999999999999999644

>2oyc_A PLP phosphatase, pyridoxal phosphate phosphatase; structural genomics, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI-2; 1.72A {Homo sapiens} PDB: 2p27_A 2p69_A* 2cft_A* 2cfs_A 2cfr_A*

Probab=99.09  E-value=3.4e-10  Score=106.66  Aligned_cols=108  Identities=25%  Similarity=0.277  Sum_probs=82.1

Q ss_pred             cCCCCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCC-C-----ccHHHHHHHHHHhCCeEEEcccCCCch-hHHHHHH
Q 017982          196 APYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEY-D-----NDASKARKLEGKIGIKVIRHRVKKPAG-TAEEIEK  268 (363)
Q Consensus       196 ~~~~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~-d-----p~~~~a~~i~~~LGi~~I~~~~kKP~p-~~~~alk  268 (363)
                      .+.....+|++.++++.|+ ..|+ ++|+||.+..... .     ..+.....+....+...+  ..+||.+ .++.+++
T Consensus       151 ~~~~~~~~~~~~~~l~~l~-~~g~-~~i~tn~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~--~~~KP~~~~~~~~~~  226 (306)
T 2oyc_A          151 GYDEHFSFAKLREACAHLR-DPEC-LLVATDRDPWHPLSDGSRTPGTGSLAAAVETASGRQAL--VVGKPSPYMFECITE  226 (306)
T ss_dssp             CCCTTCCHHHHHHHHHHHT-STTS-EEEESCCCCEEECTTSCEEECHHHHHHHHHHHHTCCCE--ECSTTSTHHHHHHHH
T ss_pred             eCCCCCCHHHHHHHHHHHH-cCCC-EEEEEcCCccccCCCCCcCCCCcHHHHHHHHHhCCCce--eeCCCCHHHHHHHHH
Confidence            3445567899999999997 5687 9999999754320 0     012233444445565554  3689998 5789999


Q ss_pred             HhCCCCCcEEEEccCCcccHHHHHHcCCeEEEEcCCCCC
Q 017982          269 HFGCQSSQLIMVGDRPFTDIVYGNRNGFLTILTEPLSLA  307 (363)
Q Consensus       269 ~lgl~pee~vmVGDrL~TDI~~A~raGi~TIlV~p~~~~  307 (363)
                      ++|++|++++||||++.+||.+|+++|+.+++|..+...
T Consensus       227 ~lgi~~~e~l~vGD~~~~Di~~a~~aG~~~i~v~~g~~~  265 (306)
T 2oyc_A          227 NFSIDPARTLMVGDRLETDILFGHRCGMTTVLTLTGVSR  265 (306)
T ss_dssp             HSCCCGGGEEEEESCTTTHHHHHHHHTCEEEEESSSSCC
T ss_pred             HcCCChHHEEEECCCchHHHHHHHHCCCeEEEECCCCCC
Confidence            999999999999999778999999999999999876543

>3kc2_A Uncharacterized protein YKR070W; HAD-like, mitochondral protein, PSI, MCSG, structural genomi protein structure initiative; HET: MSE; 1.55A {Saccharomyces cerevisiae} PDB: 3rf6_A*

Probab=99.09  E-value=1.1e-09  Score=107.71  Aligned_cols=165  Identities=16%  Similarity=0.130  Sum_probs=101.7

Q ss_pred             CCCeEEEEcchhHHHHHHhhccccccccchhhhh---hhhcCCCCCCCCcccCCccCCChHHHH----------HcCCCE
Q 017982          119 DKYWTVLCTNMWWSQLKAALGQRINVEGIVSSTV---VFAKDRHLALPHVTVPDIRYIDWAELQ----------RRGFKG  185 (363)
Q Consensus       119 ~~~k~~v~G~~~~~~~~~~~~q~ln~~Gi~~~~~---~l~~~P~L~~P~~~v~sI~~Id~~~L~----------~~GIka  185 (363)
                      .+++|+|+|..++.+.++..       |+.....   ....+|. ..|      +..++.+++.          +..+.+
T Consensus        92 ~~~~v~viG~~~l~~~l~~~-------G~~~v~~~~d~~~~~~~-~~p------~~~l~~ee~~~~~d~ipD~~~~~v~A  157 (352)
T 3kc2_A           92 KYSRILAVGTPSVRGVAEGY-------GFQDVVHQTDIVRYNRD-IAP------FSGLSDEQVMEYSRDIPDLTTKKFDA  157 (352)
T ss_dssp             TCSEEEEESSTTHHHHHHHH-------TCSEEEEHHHHHHHCGG-GCT------TCCCCHHHHHHHCCCCTTTTTSCCCE
T ss_pred             cCCEEEEECCHHHHHHHHhC-------CCeEecchhHhhhhccc-ccc------cccCCHHHHhhhccCcccccccCCCE
Confidence            46899999999996666543       5554321   1111221 122      2333333332          134567


Q ss_pred             EEEcCCceeecCCCCCcchhHHHHHHHHHHhCCC-------------eEEEEeCCCCCCCCC------ccHHHHHHHHH-
Q 017982          186 VVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGH-------------DIAVFSNSAGLYEYD------NDASKARKLEG-  245 (363)
Q Consensus       186 VV~DlDnTL~~~~~~~~~p~v~e~L~~Lk~~~Gi-------------kl~IVSN~~g~~~~d------p~~~~a~~i~~-  245 (363)
                      |++..|-..       .++++..+.+.|....|.             ..+|+||.+..++..      ..|..+..++. 
T Consensus       158 Vvv~~Dp~d-------~~~~lq~~~d~L~s~~G~~~~~~~~~~~~~~~~~i~tN~D~~~~~~~~~~r~g~Ga~~~al~~~  230 (352)
T 3kc2_A          158 VLVFNDPHD-------WAADIQIISDAINSENGMLNTLRNEKSGKPSIPIYFSNQDLLWANPYKLNRFGQGAFRLLVRRL  230 (352)
T ss_dssp             EEECSCCSC-------HHHHHHHHHHHHTSBTTBTTCCCSCCCSSCSSCEEESCCCSEECCSSSSCEECHHHHHHHHHHH
T ss_pred             EEEeCCCcc-------hHHHHHHHHHHHHhcCCCcCcccccccCCCCCeEEEECCCcccccCCCCcccCchHHHHHHHHH
Confidence            766555433       356677777766521121             368999999776432      13454444444 


Q ss_pred             ---HhCCe--EEEcccCCCch-hHHHHHHHh----------------------CC-----CCCcEEEEccCCcccHHHHH
Q 017982          246 ---KIGIK--VIRHRVKKPAG-TAEEIEKHF----------------------GC-----QSSQLIMVGDRPFTDIVYGN  292 (363)
Q Consensus       246 ---~LGi~--~I~~~~kKP~p-~~~~alk~l----------------------gl-----~pee~vmVGDrL~TDI~~A~  292 (363)
                         ..|.+  ++.  .+||.+ .|+.|++.+                      |+     ++++++||||++.+||.+|+
T Consensus       231 y~~~tg~~~~~~~--~GKP~~~~y~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~VGD~~~~Di~~A~  308 (352)
T 3kc2_A          231 YLELNGEPLQDYT--LGKPTKLTYDFAHHVLIDWEKRLSGKIGQSVKQKLPLLGTKPSTSPFHAVFMVGDNPASDIIGAQ  308 (352)
T ss_dssp             HHHHHSSCCCCEE--CSTTCHHHHHHHHHHHHHHHHHHHC--------------CCTTTTTSSEEEEEESCTTTHHHHHH
T ss_pred             HHHhcCCCCCceE--ecCCCHHHHHHHHHHHHHHHHhhhcccccccccccccccccccCCCcceEEEEecCcHHHHHHHH
Confidence               34664  332  689999 456665543                      22     67999999999999999999


Q ss_pred             HcCCeEEEEcCCCC
Q 017982          293 RNGFLTILTEPLSL  306 (363)
Q Consensus       293 raGi~TIlV~p~~~  306 (363)
                      ++|+.+|||..+..
T Consensus       309 ~aG~~ti~V~~G~~  322 (352)
T 3kc2_A          309 NYGWNSCLVKTGVY  322 (352)
T ss_dssp             HHTCEEEECSSSSC
T ss_pred             HcCCEEEEEccCCC
Confidence            99999999987653

>2hcf_A Hydrolase, haloacid dehalogenase-like family; NP_662590.1, ST genomics, PSI-2, protein structure initiative; 1.80A {Chlorobaculum tepidum} SCOP: c.108.1.6

Probab=99.07  E-value=2e-10  Score=100.96  Aligned_cols=95  Identities=15%  Similarity=0.141  Sum_probs=76.6

Q ss_pred             CcchhHHHHHHHHHHhC-CCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCe----EEEc-----ccCCCch-hHHHHHHH
Q 017982          201 TLWGPLSSSIEQCKSVF-GHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK----VIRH-----RVKKPAG-TAEEIEKH  269 (363)
Q Consensus       201 ~~~p~v~e~L~~Lk~~~-Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~----~I~~-----~~kKP~p-~~~~alk~  269 (363)
                      .++|++.+.|+.|+ +. |++++|+||+.        ...+..+++.+|+.    .+..     ..+||.+ .+..++++
T Consensus        93 ~~~~~~~~~l~~l~-~~~g~~~~i~t~~~--------~~~~~~~l~~~~l~~~f~~~~~~~~~~~~~k~~~~~~~~~~~~  163 (234)
T 2hcf_A           93 TLLEGVRELLDALS-SRSDVLLGLLTGNF--------EASGRHKLKLPGIDHYFPFGAFADDALDRNELPHIALERARRM  163 (234)
T ss_dssp             EECTTHHHHHHHHH-TCTTEEEEEECSSC--------HHHHHHHHHTTTCSTTCSCEECTTTCSSGGGHHHHHHHHHHHH
T ss_pred             CcCCCHHHHHHHHH-hCCCceEEEEcCCc--------HHHHHHHHHHCCchhhcCcceecCCCcCccchHHHHHHHHHHH
Confidence            35789999999998 67 89999999986        35566777888875    1211     1234555 46889999


Q ss_pred             hC--CCCCcEEEEccCCcccHHHHHHcCCeEEEEcCCC
Q 017982          270 FG--CQSSQLIMVGDRPFTDIVYGNRNGFLTILTEPLS  305 (363)
Q Consensus       270 lg--l~pee~vmVGDrL~TDI~~A~raGi~TIlV~p~~  305 (363)
                      +|  ++|++++||||+. +||.+|+++|+.+|+|..+.
T Consensus       164 lg~~~~~~~~i~iGD~~-~Di~~a~~aG~~~i~v~~~~  200 (234)
T 2hcf_A          164 TGANYSPSQIVIIGDTE-HDIRCARELDARSIAVATGN  200 (234)
T ss_dssp             HCCCCCGGGEEEEESSH-HHHHHHHTTTCEEEEECCSS
T ss_pred             hCCCCCcccEEEECCCH-HHHHHHHHCCCcEEEEcCCC
Confidence            99  9999999999999 89999999999999998654

>1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6

Probab=99.06  E-value=6.2e-10  Score=96.57  Aligned_cols=96  Identities=13%  Similarity=0.166  Sum_probs=79.1

Q ss_pred             CCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCe----EEE----cccCCCch-hHHHHHHHh
Q 017982          200 LTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK----VIR----HRVKKPAG-TAEEIEKHF  270 (363)
Q Consensus       200 ~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~----~I~----~~~kKP~p-~~~~alk~l  270 (363)
                      ..++|++.+.|+.++ +.|++++|+||..        ...++.+++.+|+.    .+.    ....||.+ .+..+++++
T Consensus        93 ~~~~~~~~~~l~~l~-~~g~~~~i~t~~~--------~~~~~~~l~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~~  163 (226)
T 1te2_A           93 RPLLPGVREAVALCK-EQGLLVGLASASP--------LHMLEKVLTMFDLRDSFDALASAEKLPYSKPHPQVYLDCAAKL  163 (226)
T ss_dssp             CCBCTTHHHHHHHHH-HTTCEEEEEESSC--------HHHHHHHHHHTTCGGGCSEEEECTTSSCCTTSTHHHHHHHHHH
T ss_pred             CCcCccHHHHHHHHH-HCCCcEEEEeCCc--------HHHHHHHHHhcCcHhhCcEEEeccccCCCCCChHHHHHHHHHc
Confidence            345789999999998 5799999999985        34566777777765    222    24578888 578999999


Q ss_pred             CCCCCcEEEEccCCcccHHHHHHcCCeEEEEcCCC
Q 017982          271 GCQSSQLIMVGDRPFTDIVYGNRNGFLTILTEPLS  305 (363)
Q Consensus       271 gl~pee~vmVGDrL~TDI~~A~raGi~TIlV~p~~  305 (363)
                      |++++++++|||+. +||.+|+.+|+.+++|....
T Consensus       164 ~i~~~~~i~iGD~~-nDi~~a~~aG~~~~~~~~~~  197 (226)
T 1te2_A          164 GVDPLTCVALEDSV-NGMIASKAARMRSIVVPAPE  197 (226)
T ss_dssp             TSCGGGEEEEESSH-HHHHHHHHTTCEEEECCCTT
T ss_pred             CCCHHHeEEEeCCH-HHHHHHHHcCCEEEEEcCCC
Confidence            99999999999999 89999999999999998654

>2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6

Probab=99.03  E-value=6.1e-10  Score=94.81  Aligned_cols=95  Identities=16%  Similarity=0.251  Sum_probs=77.4

Q ss_pred             CCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCe----EEE----cccCCCch-hHHHHHHHh
Q 017982          200 LTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK----VIR----HRVKKPAG-TAEEIEKHF  270 (363)
Q Consensus       200 ~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~----~I~----~~~kKP~p-~~~~alk~l  270 (363)
                      ...+|++.+.|+.|+ +.|++++|+||...        ..+. .++.+|+.    .+.    ....||.+ .+..+++++
T Consensus        84 ~~~~~~~~~~l~~l~-~~g~~~~i~s~~~~--------~~~~-~~~~~~~~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~  153 (207)
T 2go7_A           84 VVLMPGAREVLAWAD-ESGIQQFIYTHKGN--------NAFT-ILKDLGVESYFTEILTSQSGFVRKPSPEAATYLLDKY  153 (207)
T ss_dssp             CEECTTHHHHHHHHH-HTTCEEEEECSSCT--------HHHH-HHHHHTCGGGEEEEECGGGCCCCTTSSHHHHHHHHHH
T ss_pred             ceeCcCHHHHHHHHH-HCCCeEEEEeCCch--------HHHH-HHHHcCchhheeeEEecCcCCCCCCCcHHHHHHHHHh
Confidence            346799999999998 57999999999862        4455 66777764    222    23568888 578999999


Q ss_pred             CCCCCcEEEEccCCcccHHHHHHcCCeEEEEcCCC
Q 017982          271 GCQSSQLIMVGDRPFTDIVYGNRNGFLTILTEPLS  305 (363)
Q Consensus       271 gl~pee~vmVGDrL~TDI~~A~raGi~TIlV~p~~  305 (363)
                      |++++++++|||+. +|+.+|+.+|+.+|++....
T Consensus       154 ~i~~~~~~~iGD~~-nDi~~~~~aG~~~i~~~~~~  187 (207)
T 2go7_A          154 QLNSDNTYYIGDRT-LDVEFAQNSGIQSINFLEST  187 (207)
T ss_dssp             TCCGGGEEEEESSH-HHHHHHHHHTCEEEESSCCS
T ss_pred             CCCcccEEEECCCH-HHHHHHHHCCCeEEEEecCC
Confidence            99999999999996 89999999999999997554

>2i7d_A 5'(3')-deoxyribonucleotidase, cytosolic type; hydrolase; HET: DUR; 1.20A {Homo sapiens} PDB: 2jar_A* 2jao_A*

Probab=99.01  E-value=1.9e-11  Score=107.66  Aligned_cols=86  Identities=9%  Similarity=0.026  Sum_probs=66.5

Q ss_pred             CCcchhHHHHHHHHHHhC-CCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCeEEEcccCCCchhH-HHHHHHhCCCCCcE
Q 017982          200 LTLWGPLSSSIEQCKSVF-GHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKVIRHRVKKPAGTA-EEIEKHFGCQSSQL  277 (363)
Q Consensus       200 ~~~~p~v~e~L~~Lk~~~-Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~~I~~~~kKP~p~~-~~alk~lgl~pee~  277 (363)
                      ..++|++.++|+.|+ +. |++++|+||+..        ..++.+++.+|+ +-        ..+ ..+++++|++|+++
T Consensus        72 ~~~~~g~~e~L~~L~-~~~g~~~~ivT~~~~--------~~~~~~l~~~gl-f~--------~i~~~~~~~~~~~~~~~~  133 (193)
T 2i7d_A           72 LEPIPGALDAVREMN-DLPDTQVFICTSPLL--------KYHHCVGEKYRW-VE--------QHLGPQFVERIILTRDKT  133 (193)
T ss_dssp             CCBCTTHHHHHHHHH-TSTTEEEEEEECCCS--------SCTTTHHHHHHH-HH--------HHHCHHHHTTEEECSCGG
T ss_pred             CccCcCHHHHHHHHH-hCCCCeEEEEeCCCh--------hhHHHHHHHhCc-hh--------hhcCHHHHHHcCCCcccE
Confidence            356899999999998 67 899999999963        223344555555 10        011 24788999999999


Q ss_pred             EEEccCCccc----HHHHH-HcCCeEEEEcCC
Q 017982          278 IMVGDRPFTD----IVYGN-RNGFLTILTEPL  304 (363)
Q Consensus       278 vmVGDrL~TD----I~~A~-raGi~TIlV~p~  304 (363)
                      +||||++ .|    |.+|+ ++|+.+|++...
T Consensus       134 ~~vgDs~-~dD~~~i~~A~~~aG~~~i~~~~~  164 (193)
T 2i7d_A          134 VVLGDLL-IDDKDTVRGQEETPSWEHILFTCC  164 (193)
T ss_dssp             GBCCSEE-EESSSCCCSSCSSCSSEEEEECCG
T ss_pred             EEECCch-hhCcHHHhhcccccccceEEEEec
Confidence            9999999 56    99999 999999999743

>2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A

Probab=99.01  E-value=5e-10  Score=97.29  Aligned_cols=91  Identities=19%  Similarity=0.151  Sum_probs=74.4

Q ss_pred             CCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCe----EEE----cccCCCch-hHHHHHHHh
Q 017982          200 LTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK----VIR----HRVKKPAG-TAEEIEKHF  270 (363)
Q Consensus       200 ~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~----~I~----~~~kKP~p-~~~~alk~l  270 (363)
                      ..++|++.+.|+.|+ +.|++++|+||..          .+..+++.+|+.    .+.    ....||.+ .+..+++++
T Consensus        90 ~~~~~~~~~~l~~l~-~~g~~~~i~t~~~----------~~~~~l~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~l  158 (221)
T 2wf7_A           90 ADVYPGILQLLKDLR-SNKIKIALASASK----------NGPFLLERMNLTGYFDAIADPAEVAASKPAPDIFIAAAHAV  158 (221)
T ss_dssp             GGBCTTHHHHHHHHH-HTTCEEEECCCCT----------THHHHHHHTTCGGGCSEECCTTTSSSCTTSSHHHHHHHHHT
T ss_pred             CCCCCCHHHHHHHHH-HCCCeEEEEcCcH----------HHHHHHHHcChHHHcceEeccccCCCCCCChHHHHHHHHHc
Confidence            346789999999998 5799999999982          134456666764    222    24678988 578999999


Q ss_pred             CCCCCcEEEEccCCcccHHHHHHcCCeEEEEc
Q 017982          271 GCQSSQLIMVGDRPFTDIVYGNRNGFLTILTE  302 (363)
Q Consensus       271 gl~pee~vmVGDrL~TDI~~A~raGi~TIlV~  302 (363)
                      |++|+++++|||+. +||.+|+.+|+.+++++
T Consensus       159 gi~~~~~i~iGD~~-nDi~~a~~aG~~~~~~~  189 (221)
T 2wf7_A          159 GVAPSESIGLEDSQ-AGIQAIKDSGALPIGVG  189 (221)
T ss_dssp             TCCGGGEEEEESSH-HHHHHHHHHTCEEEEES
T ss_pred             CCChhHeEEEeCCH-HHHHHHHHCCCEEEEEC
Confidence            99999999999998 89999999999999996

>2fi1_A Hydrolase, haloacid dehalogenase-like family; structural genomics, haloacid dehalogenase-like F PSI, protein structure initiative; 1.40A {Streptococcus pneumoniae} SCOP: c.108.1.3

Probab=99.01  E-value=9e-10  Score=94.15  Aligned_cols=90  Identities=21%  Similarity=0.284  Sum_probs=74.7

Q ss_pred             cchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCe----EEE----cccCCCch-hHHHHHHHhCC
Q 017982          202 LWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK----VIR----HRVKKPAG-TAEEIEKHFGC  272 (363)
Q Consensus       202 ~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~----~I~----~~~kKP~p-~~~~alk~lgl  272 (363)
                      ++|++.++|+.|+ +.|++++|+||..         ..+..+++.+|+.    .+.    ....||.+ .+..+++++|+
T Consensus        83 ~~~~~~~~l~~l~-~~g~~~~i~t~~~---------~~~~~~l~~~~~~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~  152 (190)
T 2fi1_A           83 LFEGVSDLLEDIS-NQGGRHFLVSHRN---------DQVLEILEKTSIAAYFTEVVTSSSGFKRKPNPESMLYLREKYQI  152 (190)
T ss_dssp             BCTTHHHHHHHHH-HTTCEEEEECSSC---------THHHHHHHHTTCGGGEEEEECGGGCCCCTTSCHHHHHHHHHTTC
T ss_pred             cCcCHHHHHHHHH-HCCCcEEEEECCc---------HHHHHHHHHcCCHhheeeeeeccccCCCCCCHHHHHHHHHHcCC
Confidence            6899999999998 5799999999985         2456777778864    222    23578888 57899999999


Q ss_pred             CCCcEEEEccCCcccHHHHHHcCCeEEEEcCC
Q 017982          273 QSSQLIMVGDRPFTDIVYGNRNGFLTILTEPL  304 (363)
Q Consensus       273 ~pee~vmVGDrL~TDI~~A~raGi~TIlV~p~  304 (363)
                      +  ++++|||+. +|+.+|+.+|+.+++|...
T Consensus       153 ~--~~~~iGD~~-~Di~~a~~aG~~~~~~~~~  181 (190)
T 2fi1_A          153 S--SGLVIGDRP-IDIEAGQAAGLDTHLFTSI  181 (190)
T ss_dssp             S--SEEEEESSH-HHHHHHHHTTCEEEECSCH
T ss_pred             C--eEEEEcCCH-HHHHHHHHcCCeEEEECCC
Confidence            8  999999997 8999999999999999754

>3d6j_A Putative haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343}

Probab=98.98  E-value=1.5e-09  Score=94.11  Aligned_cols=95  Identities=13%  Similarity=0.055  Sum_probs=77.7

Q ss_pred             CcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCe----EEE----cccCCCch-hHHHHHHHhC
Q 017982          201 TLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK----VIR----HRVKKPAG-TAEEIEKHFG  271 (363)
Q Consensus       201 ~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~----~I~----~~~kKP~p-~~~~alk~lg  271 (363)
                      .++|++.+.++.++ +.|++++|+||..        ...+..+++.+|+.    .+.    ....||.+ .+..+++++|
T Consensus        89 ~~~~~~~~~l~~l~-~~g~~~~i~s~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~  159 (225)
T 3d6j_A           89 ILFPDTLPTLTHLK-KQGIRIGIISTKY--------RFRILSFLRNHMPDDWFDIIIGGEDVTHHKPDPEGLLLAIDRLK  159 (225)
T ss_dssp             EECTTHHHHHHHHH-HHTCEEEEECSSC--------HHHHHHHHHTSSCTTCCSEEECGGGCSSCTTSTHHHHHHHHHTT
T ss_pred             ccCcCHHHHHHHHH-HCCCeEEEEECCC--------HHHHHHHHHHcCchhheeeeeehhhcCCCCCChHHHHHHHHHhC
Confidence            45789999999998 5699999999985        35566777777764    222    23468887 5789999999


Q ss_pred             CCCCcEEEEccCCcccHHHHHHcCCeEEEEcCCC
Q 017982          272 CQSSQLIMVGDRPFTDIVYGNRNGFLTILTEPLS  305 (363)
Q Consensus       272 l~pee~vmVGDrL~TDI~~A~raGi~TIlV~p~~  305 (363)
                      ++++++++|||+. .|+.+|+.+|+.+++|..+.
T Consensus       160 ~~~~~~i~iGD~~-nDi~~~~~aG~~~~~~~~~~  192 (225)
T 3d6j_A          160 ACPEEVLYIGDST-VDAGTAAAAGVSFTGVTSGM  192 (225)
T ss_dssp             CCGGGEEEEESSH-HHHHHHHHHTCEEEEETTSS
T ss_pred             CChHHeEEEcCCH-HHHHHHHHCCCeEEEECCCC
Confidence            9999999999998 89999999999999998654

>3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I

Probab=98.98  E-value=4.2e-09  Score=98.77  Aligned_cols=113  Identities=16%  Similarity=0.220  Sum_probs=90.9

Q ss_pred             HHHHHcCCCEEEEcCCceeecC--CCCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCeEEE
Q 017982          176 AELQRRGFKGVVFDKDNTLTAP--YSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKVIR  253 (363)
Q Consensus       176 ~~L~~~GIkaVV~DlDnTL~~~--~~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~~I~  253 (363)
                      +.+.+.|.+++.+|.|+++...  ....++|++.++|+.|+ +.|++++|+||+.        ...++.+++.+|+..++
T Consensus       136 ~~~~~~g~~~i~~~~d~~~~~~~~~~~~~~~g~~~~l~~L~-~~g~~~~i~T~~~--------~~~~~~~l~~~gl~~~f  206 (287)
T 3a1c_A          136 EKLEREAKTAVIVARNGRVEGIIAVSDTLKESAKPAVQELK-RMGIKVGMITGDN--------WRSAEAISRELNLDLVI  206 (287)
T ss_dssp             HHHHHTTCEEEEEEETTEEEEEEEEECCBCTTHHHHHHHHH-HTTCEEEEECSSC--------HHHHHHHHHHHTCSEEE
T ss_pred             HHHHhCCCeEEEEEECCEEEEEEEeccccchhHHHHHHHHH-HCCCeEEEEeCCC--------HHHHHHHHHHhCCceee
Confidence            3456789999999999987642  34578999999999998 5799999999996        36678888999998654


Q ss_pred             cccCCCchhHHHHHHHhCCCCCcEEEEccCCcccHHHHHHcCCeEEEEc
Q 017982          254 HRVKKPAGTAEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGFLTILTE  302 (363)
Q Consensus       254 ~~~kKP~p~~~~alk~lgl~pee~vmVGDrL~TDI~~A~raGi~TIlV~  302 (363)
                      ... .|.. ...+++.++.. ++|+||||+. +|+.+|+++|+. +.+.
T Consensus       207 ~~i-~~~~-K~~~~~~l~~~-~~~~~vGDs~-~Di~~a~~ag~~-v~~~  250 (287)
T 3a1c_A          207 AEV-LPHQ-KSEEVKKLQAK-EVVAFVGDGI-NDAPALAQADLG-IAVG  250 (287)
T ss_dssp             CSC-CTTC-HHHHHHHHTTT-CCEEEEECTT-TCHHHHHHSSEE-EEEC
T ss_pred             eec-ChHH-HHHHHHHHhcC-CeEEEEECCH-HHHHHHHHCCee-EEeC
Confidence            322 3433 25788999999 9999999998 899999999997 5553

>1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A

Probab=98.95  E-value=1.4e-09  Score=98.24  Aligned_cols=97  Identities=14%  Similarity=0.141  Sum_probs=77.2

Q ss_pred             CCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCe-----EEE----cccCCCch-hHHHHHHH
Q 017982          200 LTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK-----VIR----HRVKKPAG-TAEEIEKH  269 (363)
Q Consensus       200 ~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~-----~I~----~~~kKP~p-~~~~alk~  269 (363)
                      ..++|++.+.|+.|+ ..|++++|+||..        ...+..+++.+|+.     .+.    ....||.+ .+..++++
T Consensus       102 ~~~~~~~~~~l~~l~-~~g~~~~i~t~~~--------~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~  172 (267)
T 1swv_A          102 ASPINGVKEVIASLR-ERGIKIGSTTGYT--------REMMDIVAKEAALQGYKPDFLVTPDDVPAGRPYPWMCYKNAME  172 (267)
T ss_dssp             CCBCTTHHHHHHHHH-HTTCEEEEBCSSC--------HHHHHHHHHHHHHTTCCCSCCBCGGGSSCCTTSSHHHHHHHHH
T ss_pred             cccCccHHHHHHHHH-HcCCeEEEEcCCC--------HHHHHHHHHHcCCcccChHheecCCccCCCCCCHHHHHHHHHH
Confidence            346789999999998 5799999999985        24455555555432     121    23478888 57899999


Q ss_pred             hCCCC-CcEEEEccCCcccHHHHHHcCCeEEEEcCCCC
Q 017982          270 FGCQS-SQLIMVGDRPFTDIVYGNRNGFLTILTEPLSL  306 (363)
Q Consensus       270 lgl~p-ee~vmVGDrL~TDI~~A~raGi~TIlV~p~~~  306 (363)
                      +|+++ ++++||||+. .||.+|+.+|+.+++|..+..
T Consensus       173 lgi~~~~~~i~iGD~~-nDi~~a~~aG~~~i~v~~~~~  209 (267)
T 1swv_A          173 LGVYPMNHMIKVGDTV-SDMKEGRNAGMWTVGVILGSS  209 (267)
T ss_dssp             HTCCSGGGEEEEESSH-HHHHHHHHTTSEEEEECTTCT
T ss_pred             hCCCCCcCEEEEeCCH-HHHHHHHHCCCEEEEEcCCCC
Confidence            99999 9999999999 899999999999999987653

>2qlt_A (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, saccharom cerevisiae, structural genomics, PSI-2, protein structure initiative; 1.60A {Saccharomyces cerevisiae}

Probab=98.92  E-value=2.6e-09  Score=98.57  Aligned_cols=96  Identities=16%  Similarity=0.109  Sum_probs=79.9

Q ss_pred             CCcchhHHHHHHHHHHhC-CCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCe---EEE----cccCCCch-hHHHHHHHh
Q 017982          200 LTLWGPLSSSIEQCKSVF-GHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK---VIR----HRVKKPAG-TAEEIEKHF  270 (363)
Q Consensus       200 ~~~~p~v~e~L~~Lk~~~-Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~---~I~----~~~kKP~p-~~~~alk~l  270 (363)
                      ..++|++.+.|+.|+ +. |++++|+||+.        ...+..+++.+|+.   .+.    ....||.+ .+..+++++
T Consensus       113 ~~~~~g~~~~L~~l~-~~~g~~l~i~T~~~--------~~~~~~~l~~~~l~~f~~i~~~~~~~~~kp~~~~~~~~~~~l  183 (275)
T 2qlt_A          113 SIEVPGAVKLCNALN-ALPKEKWAVATSGT--------RDMAKKWFDILKIKRPEYFITANDVKQGKPHPEPYLKGRNGL  183 (275)
T ss_dssp             CEECTTHHHHHHHHH-TSCGGGEEEECSSC--------HHHHHHHHHHHTCCCCSSEECGGGCSSCTTSSHHHHHHHHHT
T ss_pred             CCcCcCHHHHHHHHH-hccCCeEEEEeCCC--------HHHHHHHHHHcCCCccCEEEEcccCCCCCCChHHHHHHHHHc
Confidence            456799999999998 57 89999999996        35667777778775   222    23578888 578999999


Q ss_pred             CC-------CCCcEEEEccCCcccHHHHHHcCCeEEEEcCCC
Q 017982          271 GC-------QSSQLIMVGDRPFTDIVYGNRNGFLTILTEPLS  305 (363)
Q Consensus       271 gl-------~pee~vmVGDrL~TDI~~A~raGi~TIlV~p~~  305 (363)
                      |+       +|++|++|||+. +||.+|+++|+.+++|..+.
T Consensus       184 gi~~~~~~~~~~~~i~~GDs~-nDi~~a~~AG~~~i~v~~~~  224 (275)
T 2qlt_A          184 GFPINEQDPSKSKVVVFEDAP-AGIAAGKAAGCKIVGIATTF  224 (275)
T ss_dssp             TCCCCSSCGGGSCEEEEESSH-HHHHHHHHTTCEEEEESSSS
T ss_pred             CCCccccCCCcceEEEEeCCH-HHHHHHHHcCCEEEEECCCC
Confidence            99       999999999999 89999999999999998653

>2p11_A Hypothetical protein; putative haloacid dehalogenase-like hydrolase, structural GE joint center for structural genomics, JCSG; 2.20A {Burkholderia xenovorans}

Probab=98.91  E-value=1.7e-09  Score=96.99  Aligned_cols=92  Identities=9%  Similarity=0.087  Sum_probs=69.7

Q ss_pred             CCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCeE-----EEcccCCCchhHHHHHHHhCCCC
Q 017982          200 LTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKV-----IRHRVKKPAGTAEEIEKHFGCQS  274 (363)
Q Consensus       200 ~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~~-----I~~~~kKP~p~~~~alk~lgl~p  274 (363)
                      ..++|++.++|+.|+ +.| +++|+||+..        ..++.+++.+|+..     +.....||. .+..+++  +++|
T Consensus        95 ~~~~~g~~~~l~~l~-~~g-~~~i~Tn~~~--------~~~~~~l~~~gl~~~f~~~~~~~~~K~~-~~~~~~~--~~~~  161 (231)
T 2p11_A           95 SRVYPGALNALRHLG-ARG-PTVILSDGDV--------VFQPRKIARSGLWDEVEGRVLIYIHKEL-MLDQVME--CYPA  161 (231)
T ss_dssp             GGBCTTHHHHHHHHH-TTS-CEEEEEECCS--------SHHHHHHHHTTHHHHTTTCEEEESSGGG-CHHHHHH--HSCC
T ss_pred             CCcCccHHHHHHHHH-hCC-CEEEEeCCCH--------HHHHHHHHHcCcHHhcCeeEEecCChHH-HHHHHHh--cCCC
Confidence            457899999999998 578 9999999963        34566666766541     111234532 3555555  7999


Q ss_pred             CcEEEEccCCc--ccHHHHHHcCCeEEEEcCC
Q 017982          275 SQLIMVGDRPF--TDIVYGNRNGFLTILTEPL  304 (363)
Q Consensus       275 ee~vmVGDrL~--TDI~~A~raGi~TIlV~p~  304 (363)
                      ++++||||+..  +|+.+|+++|+.+|+|..+
T Consensus       162 ~~~~~vgDs~~d~~di~~A~~aG~~~i~v~~g  193 (231)
T 2p11_A          162 RHYVMVDDKLRILAAMKKAWGARLTTVFPRQG  193 (231)
T ss_dssp             SEEEEECSCHHHHHHHHHHHGGGEEEEEECCS
T ss_pred             ceEEEEcCccchhhhhHHHHHcCCeEEEeCCC
Confidence            99999999983  3999999999999999865

>2i33_A Acid phosphatase; HAD superfamily, hydrolase; 1.57A {Bacillus anthracis} PDB: 2i34_A

Probab=98.91  E-value=1.2e-09  Score=102.76  Aligned_cols=112  Identities=17%  Similarity=0.121  Sum_probs=79.2

Q ss_pred             HcCCCEEEEcCCceeecCC------------------------CCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCc
Q 017982          180 RRGFKGVVFDKDNTLTAPY------------------------SLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDN  235 (363)
Q Consensus       180 ~~GIkaVV~DlDnTL~~~~------------------------~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp  235 (363)
                      ..++++|+||+|+||....                        ...++|++.++|+.|+ +.|++++|+||+..     .
T Consensus        56 ~~~~kavifDlDGTLld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~e~L~~L~-~~Gi~i~iaTnr~~-----~  129 (258)
T 2i33_A           56 TEKKPAIVLDLDETVLDNSPHQAMSVKTGKGYPYKWDDWINKAEAEALPGSIDFLKYTE-SKGVDIYYISNRKT-----N  129 (258)
T ss_dssp             CSSEEEEEECSBTTTEECHHHHHHHHHHSCCTTTTHHHHHHHCCCEECTTHHHHHHHHH-HTTCEEEEEEEEEG-----G
T ss_pred             CCCCCEEEEeCcccCcCCHHHHHHHHhcccchHHHHHHHHHcCCCCcCccHHHHHHHHH-HCCCEEEEEcCCch-----h
Confidence            3478999999999998631                        1567899999999998 58999999999952     1


Q ss_pred             cHHHHHHHHHHhCCe------EEEcc--cCCCchhHHHHHHHhCCCCCcEEEEccCCcccHHHHH-------H-------
Q 017982          236 DASKARKLEGKIGIK------VIRHR--VKKPAGTAEEIEKHFGCQSSQLIMVGDRPFTDIVYGN-------R-------  293 (363)
Q Consensus       236 ~~~~a~~i~~~LGi~------~I~~~--~kKP~p~~~~alk~lgl~pee~vmVGDrL~TDI~~A~-------r-------  293 (363)
                      ....+...++.+|++      ++...  ..||.+. ..++ ..+.  ..++||||++ +||.+|.       +       
T Consensus       130 ~~~~~~~~L~~~Gl~~v~~~~vi~~~~~~~K~~~~-~~~~-~~~~--~~~l~VGDs~-~Di~aA~~~~~~~r~a~v~~~~  204 (258)
T 2i33_A          130 QLDATIKNLERVGAPQATKEHILLQDPKEKGKEKR-RELV-SQTH--DIVLFFGDNL-SDFTGFDGKSVKDRNQAVTDSK  204 (258)
T ss_dssp             GHHHHHHHHHHHTCSSCSTTTEEEECTTCCSSHHH-HHHH-HHHE--EEEEEEESSG-GGSTTCSSCCHHHHHHHHHHTG
T ss_pred             HHHHHHHHHHHcCCCcCCCceEEECCCCCCCcHHH-HHHH-HhCC--CceEEeCCCH-HHhcccccCCHHHHHHHHHHHH
Confidence            123455666778876      12211  1355542 2222 2333  3599999999 7999993       4       


Q ss_pred             --cCCeEEEEc
Q 017982          294 --NGFLTILTE  302 (363)
Q Consensus       294 --aGi~TIlV~  302 (363)
                        +|+.+|.|.
T Consensus       205 ~~aG~~~i~lp  215 (258)
T 2i33_A          205 AQFGEKFIIFP  215 (258)
T ss_dssp             GGBTTTEEECC
T ss_pred             HHhcCceEECC
Confidence              799999775

>2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20

Probab=98.88  E-value=2.7e-09  Score=96.32  Aligned_cols=88  Identities=13%  Similarity=0.084  Sum_probs=70.1

Q ss_pred             CCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCC---e-EEE---cc--------cCCCchh-H
Q 017982          200 LTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGI---K-VIR---HR--------VKKPAGT-A  263 (363)
Q Consensus       200 ~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi---~-~I~---~~--------~kKP~p~-~  263 (363)
                      ..++|++.++|+.|+ +.|++++|+||+.        ...++.+++  |+   + ++.   ..        ..||++. +
T Consensus        76 ~~~~pg~~~~l~~L~-~~g~~~~ivS~~~--------~~~~~~~l~--~l~~~~~v~~~~~~~~~~~~~~~~~kp~p~~~  144 (236)
T 2fea_A           76 AKIREGFREFVAFIN-EHEIPFYVISGGM--------DFFVYPLLE--GIVEKDRIYCNHASFDNDYIHIDWPHSCKGTC  144 (236)
T ss_dssp             CCBCTTHHHHHHHHH-HHTCCEEEEEEEE--------HHHHHHHHT--TTSCGGGEEEEEEECSSSBCEEECTTCCCTTC
T ss_pred             CCCCccHHHHHHHHH-hCCCeEEEEeCCc--------HHHHHHHHh--cCCCCCeEEeeeeEEcCCceEEecCCCCcccc
Confidence            457899999999998 5799999999995        355666665  54   2 222   11        1688874 3


Q ss_pred             -H-------HHHHHhCCCCCcEEEEccCCcccHHHHHHcCCeEE
Q 017982          264 -E-------EIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGFLTI  299 (363)
Q Consensus       264 -~-------~alk~lgl~pee~vmVGDrL~TDI~~A~raGi~TI  299 (363)
                       .       .+++++++++++++||||+. +|+.+|+++|+.++
T Consensus       145 ~~~~~~~K~~~~~~~~~~~~~~~~vGDs~-~Di~~a~~aG~~~~  187 (236)
T 2fea_A          145 SNQCGCCKPSVIHELSEPNQYIIMIGDSV-TDVEAAKLSDLCFA  187 (236)
T ss_dssp             CSCCSSCHHHHHHHHCCTTCEEEEEECCG-GGHHHHHTCSEEEE
T ss_pred             ccccCCcHHHHHHHHhccCCeEEEEeCCh-HHHHHHHhCCeeee
Confidence             3       89999999999999999996 89999999999886

>1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A

Probab=98.87  E-value=4.3e-09  Score=93.11  Aligned_cols=91  Identities=16%  Similarity=0.158  Sum_probs=72.7

Q ss_pred             CCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCe---EE-------------Eccc------C
Q 017982          200 LTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK---VI-------------RHRV------K  257 (363)
Q Consensus       200 ~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~---~I-------------~~~~------k  257 (363)
                      ..++|++.++|+.|+ +.|++++|+||+.        ...++.+++.+|+.   ++             ....      .
T Consensus        85 ~~~~~g~~~~l~~L~-~~g~~~~i~T~~~--------~~~~~~~l~~~gl~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~  155 (225)
T 1nnl_A           85 PHLTPGIRELVSRLQ-ERNVQVFLISGGF--------RSIVEHVASKLNIPATNVFANRLKFYFNGEYAGFDETQPTAES  155 (225)
T ss_dssp             CCBCTTHHHHHHHHH-HTTCEEEEEEEEE--------HHHHHHHHHHTTCCGGGEEEECEEECTTSCEEEECTTSGGGST
T ss_pred             CCCCccHHHHHHHHH-HCCCcEEEEeCCh--------HHHHHHHHHHcCCCcccEEeeeEEEcCCCcEecCCCCCcccCC
Confidence            457899999999998 5799999999995        46678888999986   22             1000      1


Q ss_pred             CCch-hHHHHHHHhCCCCCcEEEEccCCcccHHHHHHcCCeEEEEcC
Q 017982          258 KPAG-TAEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGFLTILTEP  303 (363)
Q Consensus       258 KP~p-~~~~alk~lgl~pee~vmVGDrL~TDI~~A~raGi~TIlV~p  303 (363)
                      ||.| .+..+++++|+  ++++||||+. +||.+|+++|+ +|++..
T Consensus       156 ~~Kp~~~~~~~~~~~~--~~~~~vGDs~-~Di~~a~~ag~-~i~~~~  198 (225)
T 1nnl_A          156 GGKGKVIKLLKEKFHF--KKIIMIGDGA-TDMEACPPADA-FIGFGG  198 (225)
T ss_dssp             THHHHHHHHHHHHHCC--SCEEEEESSH-HHHTTTTTSSE-EEEECS
T ss_pred             CchHHHHHHHHHHcCC--CcEEEEeCcH-HhHHHHHhCCe-EEEecC
Confidence            3344 56889999998  7999999999 89999999999 898854

>2fdr_A Conserved hypothetical protein; SAD, structural genomics, agrobacter tumefaciens, HAD-superfamily hydrolase; 2.00A {Agrobacterium tumefaciens str} SCOP: c.108.1.6

Probab=98.84  E-value=1.1e-08  Score=89.47  Aligned_cols=93  Identities=18%  Similarity=0.198  Sum_probs=74.8

Q ss_pred             CcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCe-----EEE----cccC--CCch-hHHHHHH
Q 017982          201 TLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK-----VIR----HRVK--KPAG-TAEEIEK  268 (363)
Q Consensus       201 ~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~-----~I~----~~~k--KP~p-~~~~alk  268 (363)
                      .++|++.+.|+.++ .   +++|+||..        ...+..+++.+|+.     .+.    ...+  ||.+ .+..+++
T Consensus        87 ~~~~~~~~~l~~l~-~---~~~i~s~~~--------~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~kpk~~~~~~~~~  154 (229)
T 2fdr_A           87 KIIDGVKFALSRLT-T---PRCICSNSS--------SHRLDMMLTKVGLKPYFAPHIYSAKDLGADRVKPKPDIFLHGAA  154 (229)
T ss_dssp             CBCTTHHHHHHHCC-S---CEEEEESSC--------HHHHHHHHHHTTCGGGTTTCEEEHHHHCTTCCTTSSHHHHHHHH
T ss_pred             ccCcCHHHHHHHhC-C---CEEEEECCC--------hhHHHHHHHhCChHHhccceEEeccccccCCCCcCHHHHHHHHH
Confidence            45788888888775 2   899999996        35566777777764     222    2456  8888 6799999


Q ss_pred             HhCCCCCcEEEEccCCcccHHHHHHcCCeEEEEcCCCC
Q 017982          269 HFGCQSSQLIMVGDRPFTDIVYGNRNGFLTILTEPLSL  306 (363)
Q Consensus       269 ~lgl~pee~vmVGDrL~TDI~~A~raGi~TIlV~p~~~  306 (363)
                      ++|++++++++|||+. .||.+|+.+|+.+|++.....
T Consensus       155 ~l~~~~~~~i~iGD~~-~Di~~a~~aG~~~i~~~~~~~  191 (229)
T 2fdr_A          155 QFGVSPDRVVVVEDSV-HGIHGARAAGMRVIGFTGASH  191 (229)
T ss_dssp             HHTCCGGGEEEEESSH-HHHHHHHHTTCEEEEECCSTT
T ss_pred             HcCCChhHeEEEcCCH-HHHHHHHHCCCEEEEEecCCc
Confidence            9999999999999999 899999999999999986553

>3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae}

Probab=98.79  E-value=1.2e-08  Score=97.43  Aligned_cols=91  Identities=15%  Similarity=0.242  Sum_probs=76.2

Q ss_pred             CCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCeEEEc------------------ccCCCch
Q 017982          200 LTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKVIRH------------------RVKKPAG  261 (363)
Q Consensus       200 ~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~~I~~------------------~~kKP~p  261 (363)
                      ..++|++.++|+.|+ +.|++++|+||..        ...++.+.+.+|+..++.                  ..+||.+
T Consensus       177 ~~~~pg~~~~l~~L~-~~g~~~~ivS~~~--------~~~~~~~~~~lgl~~~~~~~l~~~d~~~tg~~~~~~~~~kpk~  247 (335)
T 3n28_A          177 LPLMPELPELVATLH-AFGWKVAIASGGF--------TYFSDYLKEQLSLDYAQSNTLEIVSGKLTGQVLGEVVSAQTKA  247 (335)
T ss_dssp             CCCCTTHHHHHHHHH-HTTCEEEEEEEEE--------HHHHHHHHHHHTCSEEEEEEEEEETTEEEEEEESCCCCHHHHH
T ss_pred             CCcCcCHHHHHHHHH-HCCCEEEEEeCCc--------HHHHHHHHHHcCCCeEEeeeeEeeCCeeeeeecccccChhhhH
Confidence            357899999999998 5899999999985        467788888999864321                  1247777


Q ss_pred             -hHHHHHHHhCCCCCcEEEEccCCcccHHHHHHcCCeEEE
Q 017982          262 -TAEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGFLTIL  300 (363)
Q Consensus       262 -~~~~alk~lgl~pee~vmVGDrL~TDI~~A~raGi~TIl  300 (363)
                       .+..+++++|+++++++||||+. +|+.+|+.+|+..++
T Consensus       248 ~~~~~~~~~lgi~~~~~v~vGDs~-nDi~~a~~aG~~va~  286 (335)
T 3n28_A          248 DILLTLAQQYDVEIHNTVAVGDGA-NDLVMMAAAGLGVAY  286 (335)
T ss_dssp             HHHHHHHHHHTCCGGGEEEEECSG-GGHHHHHHSSEEEEE
T ss_pred             HHHHHHHHHcCCChhhEEEEeCCH-HHHHHHHHCCCeEEe
Confidence             57899999999999999999998 899999999997776

>2hhl_A CTD small phosphatase-like protein; CTD phosphatase, keggins anion, structural genomics, PSI, protein structure initiative; HET: KEG; 2.10A {Homo sapiens}

Probab=98.75  E-value=1.7e-09  Score=97.99  Aligned_cols=127  Identities=16%  Similarity=0.140  Sum_probs=93.0

Q ss_pred             HcCCCEEEEcCCceeecC--CC--------------------CCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccH
Q 017982          180 RRGFKGVVFDKDNTLTAP--YS--------------------LTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDA  237 (363)
Q Consensus       180 ~~GIkaVV~DlDnTL~~~--~~--------------------~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~  237 (363)
                      ..+-+++|+|+|+||...  ..                    ....|++.++|++|++ . +.++|+||+.        .
T Consensus        25 ~~~k~~LVLDLD~TLvhs~~~~~~~~d~~~~~~~~g~~~~~~v~~RPgv~efL~~l~~-~-~~i~I~Tss~--------~   94 (195)
T 2hhl_A           25 DYGKKCVVIDLDETLVHSSFKPISNADFIVPVEIDGTIHQVYVLKRPHVDEFLQRMGQ-L-FECVLFTASL--------A   94 (195)
T ss_dssp             GTTCCEEEECCBTTTEEEESSCCTTCSEEEEEEETTEEEEEEEEECTTHHHHHHHHHH-H-SEEEEECSSC--------H
T ss_pred             cCCCeEEEEccccceEcccccCCCCccceeeeecCCceeeEEEEeCcCHHHHHHHHHc-C-CeEEEEcCCC--------H
Confidence            458899999999999752  10                    1347999999999985 4 8999999996        4


Q ss_pred             HHHHHHHHHhCCeE----EEc--c--cCCCchhHHHHHHHhCCCCCcEEEEccCCcccHHHHHHcCCeEEEEcCCCCCCc
Q 017982          238 SKARKLEGKIGIKV----IRH--R--VKKPAGTAEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGFLTILTEPLSLAEE  309 (363)
Q Consensus       238 ~~a~~i~~~LGi~~----I~~--~--~kKP~p~~~~alk~lgl~pee~vmVGDrL~TDI~~A~raGi~TIlV~p~~~~~e  309 (363)
                      ..++.+++.+|..-    +..  .  ..|  ..+.++++.+|.++++|++|||+. .++.++.++|+..+-+....  .+
T Consensus        95 ~~a~~vl~~ld~~~~f~~~l~rd~~~~~k--~~~lK~L~~Lg~~~~~~vivDDs~-~~~~~~~~ngi~i~~~~~~~--~D  169 (195)
T 2hhl_A           95 KYADPVADLLDRWGVFRARLFRESCVFHR--GNYVKDLSRLGRELSKVIIVDNSP-ASYIFHPENAVPVQSWFDDM--TD  169 (195)
T ss_dssp             HHHHHHHHHHCCSSCEEEEECGGGCEEET--TEEECCGGGSSSCGGGEEEEESCG-GGGTTCGGGEEECCCCSSCT--TC
T ss_pred             HHHHHHHHHhCCcccEEEEEEcccceecC--CceeeeHhHhCCChhHEEEEECCH-HHhhhCccCccEEeeecCCC--Ch
Confidence            77889999998752    111  1  123  234577889999999999999998 79999999998765443322  23


Q ss_pred             hhHHHHHHHHHH
Q 017982          310 PFIVRQVRKLEV  321 (363)
Q Consensus       310 ~~~t~~~R~lE~  321 (363)
                      .--..+...||.
T Consensus       170 ~eL~~L~~~L~~  181 (195)
T 2hhl_A          170 TELLDLIPFFEG  181 (195)
T ss_dssp             CHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHH
Confidence            333356666665

>3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A*

Probab=98.72  E-value=6.1e-08  Score=87.89  Aligned_cols=84  Identities=14%  Similarity=0.126  Sum_probs=60.7

Q ss_pred             CcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCeEEEcccCCCch--hHHHHHHHhCCCCCcEE
Q 017982          201 TLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKVIRHRVKKPAG--TAEEIEKHFGCQSSQLI  278 (363)
Q Consensus       201 ~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~~I~~~~kKP~p--~~~~alk~lgl~pee~v  278 (363)
                      .++|++.+.|+.|+ +.|++++|+||..        ...++.+++.+|+..++...-..+.  ..+...+     +.+++
T Consensus       144 ~~~~~~~~~l~~l~-~~g~~~~i~T~~~--------~~~~~~~~~~~gl~~~f~~~~~~~k~~~~k~~~~-----~~~~~  209 (280)
T 3skx_A          144 RIRPESREAISKLK-AIGIKCMMLTGDN--------RFVAKWVAEELGLDDYFAEVLPHEKAEKVKEVQQ-----KYVTA  209 (280)
T ss_dssp             EECTTHHHHHHHHH-HTTCEEEEECSSC--------HHHHHHHHHHHTCSEEECSCCGGGHHHHHHHHHT-----TSCEE
T ss_pred             CCCHhHHHHHHHHH-HCCCEEEEEeCCC--------HHHHHHHHHHcCChhHhHhcCHHHHHHHHHHHHh-----cCCEE
Confidence            35689999999998 5799999999996        4677888999999755422211111  1222222     23899


Q ss_pred             EEccCCcccHHHHHHcCCeEE
Q 017982          279 MVGDRPFTDIVYGNRNGFLTI  299 (363)
Q Consensus       279 mVGDrL~TDI~~A~raGi~TI  299 (363)
                      ||||+. +|+.+++.+|+...
T Consensus       210 ~vGD~~-nDi~~~~~Ag~~va  229 (280)
T 3skx_A          210 MVGDGV-NDAPALAQADVGIA  229 (280)
T ss_dssp             EEECTT-TTHHHHHHSSEEEE
T ss_pred             EEeCCc-hhHHHHHhCCceEE
Confidence            999998 79999999997433

>1wr8_A Phosphoglycolate phosphatase; alpha / beta core domain, HAD superfamily, structural genomi structural genomics/proteomics initiative, RSGI; 1.60A {Pyrococcus horikoshii} SCOP: c.108.1.10

Probab=98.70  E-value=1.1e-07  Score=85.92  Aligned_cols=115  Identities=15%  Similarity=0.251  Sum_probs=79.1

Q ss_pred             CCEEEEcCCceeecCCCCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCC--------CCCc-------------------
Q 017982          183 FKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLY--------EYDN-------------------  235 (363)
Q Consensus       183 IkaVV~DlDnTL~~~~~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~--------~~dp-------------------  235 (363)
                      +|++++|+|+||.. ....+.+...++|++++ +.|+.++++|+.....        +.+.                   
T Consensus         3 ~kli~~DlDGTLl~-~~~~i~~~~~~al~~l~-~~G~~v~i~TGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~   80 (231)
T 1wr8_A            3 IKAISIDIDGTITY-PNRMIHEKALEAIRRAE-SLGIPIMLVTGNTVQFAEAASILIGTSGPVVAEDGGAISYKKKRIFL   80 (231)
T ss_dssp             CCEEEEESTTTTBC-TTSCBCHHHHHHHHHHH-HTTCCEEEECSSCHHHHHHHHHHHTCCSCEEEGGGTEEEETTEEEES
T ss_pred             eeEEEEECCCCCCC-CCCcCCHHHHHHHHHHH-HCCCEEEEEcCCChhHHHHHHHHcCCCCeEEEeCCcEEEeCCEEEEe
Confidence            68999999999986 44567789999999998 5799999999875110        0000                   


Q ss_pred             ----------------------------------------cHHHHHHHHHHhC--CeEEE-------cccCCCch-hHHH
Q 017982          236 ----------------------------------------DASKARKLEGKIG--IKVIR-------HRVKKPAG-TAEE  265 (363)
Q Consensus       236 ----------------------------------------~~~~a~~i~~~LG--i~~I~-------~~~kKP~p-~~~~  265 (363)
                                                              ....++.+.+.++  +.++.       ...+||.+ .+..
T Consensus        81 ~~l~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~~~~  160 (231)
T 1wr8_A           81 ASMDEEWILWNEIRKRFPNARTSYTMPDRRAGLVIMRETINVETVREIINELNLNLVAVDSGFAIHVKKPWINKGSGIEK  160 (231)
T ss_dssp             CCCSHHHHHHHHHHHHCTTCCBCTTGGGCSSCEEECTTTSCHHHHHHHHHHTTCSCEEEECSSCEEEECTTCCHHHHHHH
T ss_pred             ccHHHHHHHHHHHHHhCCCceEEecCCCceeeEEEECCCCCHHHHHHHHHhcCCcEEEEecCcEEEEecCCCChHHHHHH
Confidence                                                    0001111222222  11121       12346666 5688


Q ss_pred             HHHHhCCCCCcEEEEccCCcccHHHHHHcCCeEEEE
Q 017982          266 IEKHFGCQSSQLIMVGDRPFTDIVYGNRNGFLTILT  301 (363)
Q Consensus       266 alk~lgl~pee~vmVGDrL~TDI~~A~raGi~TIlV  301 (363)
                      +++++|++++++++|||+. +|+.+++.+|+. +.|
T Consensus       161 ~~~~~~~~~~~~~~iGD~~-nD~~~~~~ag~~-v~~  194 (231)
T 1wr8_A          161 ASEFLGIKPKEVAHVGDGE-NDLDAFKVVGYK-VAV  194 (231)
T ss_dssp             HHHHHTSCGGGEEEEECSG-GGHHHHHHSSEE-EEC
T ss_pred             HHHHcCCCHHHEEEECCCH-HHHHHHHHcCCe-EEe
Confidence            9999999999999999998 899999999987 555

>1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A

Probab=98.66  E-value=1e-07  Score=86.83  Aligned_cols=108  Identities=14%  Similarity=0.150  Sum_probs=82.3

Q ss_pred             CCCEEEEcCCceeecCCCCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCe--EEE------
Q 017982          182 GFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK--VIR------  253 (363)
Q Consensus       182 GIkaVV~DlDnTL~~~~~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~--~I~------  253 (363)
                      -+|.+++|+|+||.. ....+.+.+.++|++|+ +.|++++|+|+..        ...+..+.+.+|++  +|.      
T Consensus         4 m~kli~~DlDGTLl~-~~~~i~~~~~~~l~~l~-~~g~~~~i~TGr~--------~~~~~~~~~~l~~~~~~I~~NGa~i   73 (227)
T 1l6r_A            4 MIRLAAIDVDGNLTD-RDRLISTKAIESIRSAE-KKGLTVSLLSGNV--------IPVVYALKIFLGINGPVFGENGGIM   73 (227)
T ss_dssp             CCCEEEEEHHHHSBC-TTSCBCHHHHHHHHHHH-HTTCEEEEECSSC--------HHHHHHHHHHHTCCSCEEEGGGTEE
T ss_pred             ceEEEEEECCCCCcC-CCCcCCHHHHHHHHHHH-HCCCEEEEECCCC--------cHHHHHHHHHhCCCCeEEEeCCcEE
Confidence            378999999999986 44567889999999998 5799999999885        35566777777764  221      


Q ss_pred             cc-cCC---------------------------------------------------------------------C----
Q 017982          254 HR-VKK---------------------------------------------------------------------P----  259 (363)
Q Consensus       254 ~~-~kK---------------------------------------------------------------------P----  259 (363)
                      .. .++                                                                     |    
T Consensus        74 ~~~~~~~i~~~~~l~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~  153 (227)
T 1l6r_A           74 FDNDGSIKKFFSNEGTNKFLEEMSKRTSMRSILTNRWREASTGFDIDPEDVDYVRKEAESRGFVIFYSGYSWHLMNRGED  153 (227)
T ss_dssp             ECTTSCEEESSCSHHHHHHHHHHTTTSSCBCCGGGGGCSSSEEEBCCGGGHHHHHHHHHTTTEEEEEETTEEEEEETTCS
T ss_pred             EeCCCCEEEEeccHHHHHHHHHHHHHhcCCccccccceecccceEEecCCHHHHHHHHHhcCEEEEecCcEEEEecCCCC
Confidence            00 000                                                                     1    


Q ss_pred             ch-hHHHHHHHhCCCCCcEEEEccCCcccHHHHHHcCCeEEEE
Q 017982          260 AG-TAEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGFLTILT  301 (363)
Q Consensus       260 ~p-~~~~alk~lgl~pee~vmVGDrL~TDI~~A~raGi~TIlV  301 (363)
                      .. .+..+++++|++++++++|||+. +|+.+++.+|+. +.+
T Consensus       154 K~~~l~~l~~~~~~~~~~~~~iGD~~-nD~~m~~~ag~~-va~  194 (227)
T 1l6r_A          154 KAFAVNKLKEMYSLEYDEILVIGDSN-NDMPMFQLPVRK-ACP  194 (227)
T ss_dssp             HHHHHHHHHHHTTCCGGGEEEECCSG-GGHHHHTSSSEE-EEC
T ss_pred             HHHHHHHHHHHhCcCHHHEEEECCcH-HhHHHHHHcCce-EEe
Confidence            11 35678889999999999999998 899999999974 544

>2ght_A Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1; protein-peptide complex, HAD superfamily, hydrolase; HET: SEP; 1.80A {Homo sapiens} PDB: 2ghq_A* 3pgl_A* 1t9z_A* 1ta0_A* 3l0c_A 3l0y_A 3l0b_A* 2q5e_A

Probab=98.65  E-value=9.3e-09  Score=91.72  Aligned_cols=107  Identities=13%  Similarity=0.116  Sum_probs=81.8

Q ss_pred             cCCCEEEEcCCceeecC--C--------------------CCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHH
Q 017982          181 RGFKGVVFDKDNTLTAP--Y--------------------SLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDAS  238 (363)
Q Consensus       181 ~GIkaVV~DlDnTL~~~--~--------------------~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~  238 (363)
                      .+-+.+|+|+|+||...  .                    .....|++.++|+++++ . +.++|+||+.        ..
T Consensus        13 ~~k~~LVLDLD~TLvhs~~~~~~~~d~~~~~~~~~~~~~~~v~~rPg~~efL~~l~~-~-~~i~I~T~~~--------~~   82 (181)
T 2ght_A           13 SDKICVVINLDETLVHSSFKPVNNADFIIPVEIDGVVHQVYVLKRPHVDEFLQRMGE-L-FECVLFTASL--------AK   82 (181)
T ss_dssp             TTSCEEEECCBTTTEEEESSCCSSCSEEEEEEETTEEEEEEEEECTTHHHHHHHHHH-H-SEEEEECSSC--------HH
T ss_pred             CCCeEEEECCCCCeECCcccCCCCccceeeeeeCCeeEEEEEEeCCCHHHHHHHHHh-C-CCEEEEcCCC--------HH
Confidence            47789999999999742  1                    01358999999999985 4 8999999996        47


Q ss_pred             HHHHHHHHhCCeE----EEc--ccCCCchhHHHHHHHhCCCCCcEEEEccCCcccHHHHHHcCCeE
Q 017982          239 KARKLEGKIGIKV----IRH--RVKKPAGTAEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGFLT  298 (363)
Q Consensus       239 ~a~~i~~~LGi~~----I~~--~~kKP~p~~~~alk~lgl~pee~vmVGDrL~TDI~~A~raGi~T  298 (363)
                      .++.+++.++..-    +..  .+.+....+.++++.+|.++++|+||||+. .|+.++..+|+..
T Consensus        83 ~a~~vl~~ld~~~~f~~~~~rd~~~~~k~~~~k~L~~Lg~~~~~~vivdDs~-~~~~~~~~ngi~i  147 (181)
T 2ght_A           83 YADPVADLLDKWGAFRARLFRESCVFHRGNYVKDLSRLGRDLRRVLILDNSP-ASYVFHPDNAVPV  147 (181)
T ss_dssp             HHHHHHHHHCTTCCEEEEECGGGSEEETTEEECCGGGTCSCGGGEEEECSCG-GGGTTCTTSBCCC
T ss_pred             HHHHHHHHHCCCCcEEEEEeccCceecCCcEeccHHHhCCCcceEEEEeCCH-HHhccCcCCEeEe
Confidence            7888999988752    111  111111234567889999999999999998 7999999999973

>1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A*

Probab=98.64  E-value=8.7e-08  Score=82.44  Aligned_cols=91  Identities=24%  Similarity=0.273  Sum_probs=69.2

Q ss_pred             CCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCeEEEc------c-----------c-CCCch
Q 017982          200 LTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKVIRH------R-----------V-KKPAG  261 (363)
Q Consensus       200 ~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~~I~~------~-----------~-kKP~p  261 (363)
                      ..++|++.++|+.++ +.|++++|+||+.        ...++.+++.+|+..++.      .           . +++.+
T Consensus        75 ~~l~~~~~~~l~~l~-~~g~~~~i~T~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~K~  145 (211)
T 1l7m_A           75 ITPTEGAEETIKELK-NRGYVVAVVSGGF--------DIAVNKIKEKLGLDYAFANRLIVKDGKLTGDVEGEVLKENAKG  145 (211)
T ss_dssp             CCBCTTHHHHHHHHH-HTTEEEEEEEEEE--------HHHHHHHHHHHTCSEEEEEEEEEETTEEEEEEECSSCSTTHHH
T ss_pred             CCCCccHHHHHHHHH-HCCCEEEEEcCCc--------HHHHHHHHHHcCCCeEEEeeeEEECCEEcCCcccCccCCccHH
Confidence            345789999999998 5799999999985        244566777888763210      0           1 12223


Q ss_pred             -hHHHHHHHhCCCCCcEEEEccCCcccHHHHHHcCCeEEEE
Q 017982          262 -TAEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGFLTILT  301 (363)
Q Consensus       262 -~~~~alk~lgl~pee~vmVGDrL~TDI~~A~raGi~TIlV  301 (363)
                       .+..+++++|++++++++|||+. +||.+|+.+|+. +.+
T Consensus       146 ~~l~~~~~~lgi~~~~~~~iGD~~-~Di~~~~~ag~~-~~~  184 (211)
T 1l7m_A          146 EILEKIAKIEGINLEDTVAVGDGA-NDISMFKKAGLK-IAF  184 (211)
T ss_dssp             HHHHHHHHHHTCCGGGEEEEECSG-GGHHHHHHCSEE-EEE
T ss_pred             HHHHHHHHHcCCCHHHEEEEecCh-hHHHHHHHCCCE-EEE
Confidence             46888999999999999999998 899999999995 444

>4dw8_A Haloacid dehalogenase-like hydrolase; HAD, putative phosphatase, enzyme function initiative, EFI, structural genomics; 1.50A {Bacteroides thetaiotaomicron} PDB: 3niw_A 4dwo_A

Probab=98.52  E-value=1.1e-06  Score=80.61  Aligned_cols=45  Identities=20%  Similarity=0.209  Sum_probs=37.2

Q ss_pred             CCCEEEEcCCceeecCCCCCcchhHHHHHHHHHHhCCCeEEEEeCCC
Q 017982          182 GFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSA  228 (363)
Q Consensus       182 GIkaVV~DlDnTL~~~~~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~  228 (363)
                      .+|+++||+|+||.. ....+.+...++|++++ +.|+.++|+|..+
T Consensus         4 ~~kli~fDlDGTLl~-~~~~i~~~~~~al~~l~-~~G~~~~iaTGR~   48 (279)
T 4dw8_A            4 KYKLIVLDLDGTLTN-SKKEISSRNRETLIRIQ-EQGIRLVLASGRP   48 (279)
T ss_dssp             CCCEEEECCCCCCSC-TTSCCCHHHHHHHHHHH-HTTCEEEEECSSC
T ss_pred             cceEEEEeCCCCCCC-CCCccCHHHHHHHHHHH-HCCCEEEEEcCCC
Confidence            589999999999985 45567899999999998 5688888887653

>3dnp_A Stress response protein YHAX; structural PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, unknown function; HET: MSE; 1.85A {Bacillus subtilis} SCOP: c.108.1.0

Probab=98.46  E-value=1.4e-06  Score=80.27  Aligned_cols=45  Identities=16%  Similarity=0.135  Sum_probs=37.3

Q ss_pred             CCCEEEEcCCceeecCCCCCcchhHHHHHHHHHHhCCCeEEEEeCCC
Q 017982          182 GFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSA  228 (363)
Q Consensus       182 GIkaVV~DlDnTL~~~~~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~  228 (363)
                      .+|+++||+|+||.. ....+.+...++|++++ +.|+.++|+|...
T Consensus         5 ~~kli~fDlDGTLl~-~~~~i~~~~~~al~~l~-~~G~~~~iaTGR~   49 (290)
T 3dnp_A            5 SKQLLALNIDGALLR-SNGKIHQATKDAIEYVK-KKGIYVTLVTNRH   49 (290)
T ss_dssp             -CCEEEECCCCCCSC-TTSCCCHHHHHHHHHHH-HTTCEEEEBCSSC
T ss_pred             cceEEEEcCCCCCCC-CCCccCHHHHHHHHHHH-HCCCEEEEECCCC
Confidence            589999999999985 44567889999999998 5798998888764

>1q92_A 5(3)-deoxyribonucleotidase; alpha-beta rossman fold, hydrolase; HET: DRM; 1.40A {Homo sapiens} SCOP: c.108.1.8 PDB: 1mh9_A* 1q91_A* 1z4m_A* 1z4i_A* 1z4j_A* 1z4l_A* 1z4k_A* 1z4p_X* 1z4q_A* 2jau_A* 2jaw_A* 3u19_A* 3u13_A 4e88_A

Probab=98.46  E-value=3.3e-09  Score=93.68  Aligned_cols=87  Identities=8%  Similarity=0.056  Sum_probs=66.0

Q ss_pred             CCCcchhHHHHHHHHHHhC-CCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCeE-EEcccCCCchhHHHHHHHhCCCCCc
Q 017982          199 SLTLWGPLSSSIEQCKSVF-GHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKV-IRHRVKKPAGTAEEIEKHFGCQSSQ  276 (363)
Q Consensus       199 ~~~~~p~v~e~L~~Lk~~~-Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~~-I~~~~kKP~p~~~~alk~lgl~pee  276 (363)
                      ...++|++.++|+.|+ +. |++++|+||+....        ++.+++.+|+.. .+ .        ..+++++|++|++
T Consensus        73 ~~~~~~g~~e~L~~L~-~~~g~~~~ivT~~~~~~--------~~~~l~~~~l~~~~f-~--------~~~~~~l~~~~~~  134 (197)
T 1q92_A           73 ELEPLPGAVEAVKEMA-SLQNTDVFICTSPIKMF--------KYCPYEKYAWVEKYF-G--------PDFLEQIVLTRDK  134 (197)
T ss_dssp             TCCBCTTHHHHHHHHH-HSTTEEEEEEECCCSCC--------SSHHHHHHHHHHHHH-C--------GGGGGGEEECSCS
T ss_pred             cCCcCcCHHHHHHHHH-hcCCCeEEEEeCCccch--------HHHHHHHhchHHHhc-h--------HHHHHHhccCCcc
Confidence            3467899999999998 57 89999999997421        223333444321 11 0        3567789999999


Q ss_pred             EEEEccCCccc----HHHHH-HcCCeEEEEcCC
Q 017982          277 LIMVGDRPFTD----IVYGN-RNGFLTILTEPL  304 (363)
Q Consensus       277 ~vmVGDrL~TD----I~~A~-raGi~TIlV~p~  304 (363)
                      ++||||++ .|    +.+|+ ++|+.+|+|...
T Consensus       135 ~~~vgDs~-~dD~~~~~~a~~~aG~~~i~~~~~  166 (197)
T 1q92_A          135 TVVSADLL-IDDRPDITGAEPTPSWEHVLFTAC  166 (197)
T ss_dssp             TTSCCSEE-EESCSCCCCSCSSCSSEEEEECCT
T ss_pred             EEEECccc-ccCCchhhhcccCCCceEEEecCc
Confidence            99999998 57    99999 999999999744

>3fzq_A Putative hydrolase; YP_001086940.1, putative haloacid dehalogenase-like hydrolas structural genomics, joint center for structural genomics; HET: MSE; 2.10A {Clostridium difficile} SCOP: c.108.1.0

Probab=98.46  E-value=2.2e-06  Score=77.83  Aligned_cols=44  Identities=16%  Similarity=0.259  Sum_probs=37.2

Q ss_pred             CCEEEEcCCceeecCCCCCcchhHHHHHHHHHHhCCCeEEEEeCCC
Q 017982          183 FKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSA  228 (363)
Q Consensus       183 IkaVV~DlDnTL~~~~~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~  228 (363)
                      +|+++||+|+||.. ....+.+...++|++++ +.|+.++|+|..+
T Consensus         5 ~kli~fDlDGTLl~-~~~~i~~~~~~al~~l~-~~G~~~~iaTGR~   48 (274)
T 3fzq_A            5 YKLLILDIDGTLRD-EVYGIPESAKHAIRLCQ-KNHCSVVICTGRS   48 (274)
T ss_dssp             CCEEEECSBTTTBB-TTTBCCHHHHHHHHHHH-HTTCEEEEECSSC
T ss_pred             ceEEEEECCCCCCC-CCCcCCHHHHHHHHHHH-HCCCEEEEEeCCC
Confidence            78999999999986 44467889999999997 5799999998775

>3mpo_A Predicted hydrolase of the HAD superfamily; SGX, PSI, structural genomics, protein structure initiative; 2.90A {Lactobacillus brevis} SCOP: c.108.1.0

Probab=98.39  E-value=1.7e-06  Score=79.32  Aligned_cols=45  Identities=18%  Similarity=0.186  Sum_probs=29.0

Q ss_pred             CCCEEEEcCCceeecCCCCCcchhHHHHHHHHHHhCCCeEEEEeCCC
Q 017982          182 GFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSA  228 (363)
Q Consensus       182 GIkaVV~DlDnTL~~~~~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~  228 (363)
                      .+|+++||+|+||.. ....+.+...++|++++ +.|+.++++|..+
T Consensus         4 ~~kli~~DlDGTLl~-~~~~i~~~~~~al~~l~-~~G~~~~iaTGR~   48 (279)
T 3mpo_A            4 TIKLIAIDIDGTLLN-EKNELAQATIDAVQAAK-AQGIKVVLCTGRP   48 (279)
T ss_dssp             -CCEEEECC------------CHHHHHHHHHHH-HTTCEEEEECSSC
T ss_pred             ceEEEEEcCcCCCCC-CCCcCCHHHHHHHHHHH-HCCCEEEEEcCCC
Confidence            589999999999985 44567889999999998 5798998888764

>3pct_A Class C acid phosphatase; hydrolase, outer membrane; 1.85A {Pasteurella multocida}

Probab=98.39  E-value=3.4e-07  Score=86.91  Aligned_cols=99  Identities=16%  Similarity=0.142  Sum_probs=69.6

Q ss_pred             CEEEEcCCceeecC-------------C------------CCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHH
Q 017982          184 KGVVFDKDNTLTAP-------------Y------------SLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDAS  238 (363)
Q Consensus       184 kaVV~DlDnTL~~~-------------~------------~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~  238 (363)
                      .++|||+|+|++.-             +            ...++|++.++|+.|+ +.|++++|+||.+..    ....
T Consensus        59 ~avVfDIDgTlldn~~y~~~~~~~~~~f~~~~w~~wv~~g~~~~~pg~~ell~~L~-~~G~~i~ivTgR~~~----~~r~  133 (260)
T 3pct_A           59 KAVVVDLDETMIDNSAYAGWQVQSGQGFSPKTWTKWVDARQSAAIPGAVEFSNYVN-ANGGTMFFVSNRRDD----VEKA  133 (260)
T ss_dssp             EEEEECCBTTTEECHHHHHHHHHHTCCCCHHHHHHHHHTTCCEECTTHHHHHHHHH-HTTCEEEEEEEEETT----TSHH
T ss_pred             CEEEEECCccCcCChhHHHhhcccCCCCCHHHHHHHHHcCCCCCCccHHHHHHHHH-HCCCeEEEEeCCCcc----ccHH
Confidence            48999999999741             1            1246789999999998 589999999999631    0235


Q ss_pred             HHHHHHHHhCCeE-----EEcccCCCch-hHHHHHHHhCCCCCcEEEEccCCcccHHH
Q 017982          239 KARKLEGKIGIKV-----IRHRVKKPAG-TAEEIEKHFGCQSSQLIMVGDRPFTDIVY  290 (363)
Q Consensus       239 ~a~~i~~~LGi~~-----I~~~~kKP~p-~~~~alk~lgl~pee~vmVGDrL~TDI~~  290 (363)
                      .+...++.+|++.     +.....++.. .....+...|.  .-+++|||++ .|+.+
T Consensus       134 ~T~~~L~~lGi~~~~~~~Lilr~~~~~K~~~r~~L~~~gy--~iv~~iGD~~-~Dl~~  188 (260)
T 3pct_A          134 GTVDDMKRLGFTGVNDKTLLLKKDKSNKSVRFKQVEDMGY--DIVLFVGDNL-NDFGD  188 (260)
T ss_dssp             HHHHHHHHHTCCCCSTTTEEEESSCSSSHHHHHHHHTTTC--EEEEEEESSG-GGGCG
T ss_pred             HHHHHHHHcCcCccccceeEecCCCCChHHHHHHHHhcCC--CEEEEECCCh-HHcCc
Confidence            6777788899984     3322234444 23344444454  4499999999 79998

>2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A*

Probab=97.72  E-value=4.6e-08  Score=91.06  Aligned_cols=91  Identities=18%  Similarity=0.214  Sum_probs=72.6

Q ss_pred             CCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCeEEEcccCCCchhHHHHHHHhCCCCCcEE
Q 017982          199 SLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKVIRHRVKKPAGTAEEIEKHFGCQSSQLI  278 (363)
Q Consensus       199 ~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~~I~~~~kKP~p~~~~alk~lgl~pee~v  278 (363)
                      ...++|++.++|+.|+ +.|++++|+||..        ...++.+++.+|+..++... .|.. +..+++.++.++++++
T Consensus       134 ~~~~~~g~~~~l~~L~-~~g~~~~i~T~~~--------~~~~~~~~~~~gl~~~f~~~-~p~~-k~~~~~~l~~~~~~~~  202 (263)
T 2yj3_A          134 SDVPRPNLKDYLEKLK-NEGLKIIILSGDK--------EDKVKELSKELNIQEYYSNL-SPED-KVRIIEKLKQNGNKVL  202 (263)
Confidence            3467899999999998 5799999999986        25677888889987543222 2442 4678899999999999


Q ss_pred             EEccCCcccHHHHHHcCCeEEEE
Q 017982          279 MVGDRPFTDIVYGNRNGFLTILT  301 (363)
Q Consensus       279 mVGDrL~TDI~~A~raGi~TIlV  301 (363)
                      ||||+. +|+.+|+++|+...|-
T Consensus       203 ~VGD~~-~D~~aa~~Agv~va~g  224 (263)
T 2yj3_A          203 MIGDGV-NDAAALALADVSVAMG  224 (263)
Confidence            999997 8999999999865443

>4ap9_A Phosphoserine phosphatase; hydrolase, haloacid dehalogenase superfamily, NDSB; HET: 1PS; 1.78A {Thermococcus onnurineus} PDB: 4b6j_A

Probab=98.37  E-value=3.4e-07  Score=78.06  Aligned_cols=92  Identities=14%  Similarity=0.123  Sum_probs=67.3

Q ss_pred             CCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCeEEE------c---ccCCCch-hHHHHHHH
Q 017982          200 LTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKVIR------H---RVKKPAG-TAEEIEKH  269 (363)
Q Consensus       200 ~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~~I~------~---~~kKP~p-~~~~alk~  269 (363)
                      ..++|++.+.|+.|+ +.|++++|+||+..        ..++.+ +.+|+..++      .   ...+|.+ ....+++.
T Consensus        78 ~~~~~~~~~~l~~l~-~~g~~~~i~t~~~~--------~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~l~~  147 (201)
T 4ap9_A           78 VNVSPEARELVETLR-EKGFKVVLISGSFE--------EVLEPF-KELGDEFMANRAIFEDGKFQGIRLRFRDKGEFLKR  147 (201)
T ss_dssp             CCCCHHHHHHHHHHH-HTTCEEEEEEEEET--------TTSGGG-TTTSSEEEEEEEEEETTEEEEEECCSSCHHHHHGG
T ss_pred             CCCChhHHHHHHHHH-HCCCeEEEEeCCcH--------HHHHHH-HHcCchhheeeEEeeCCceECCcCCccCHHHHHHh
Confidence            367899999999998 57999999999863        234455 777876321      0   1124444 23456666


Q ss_pred             hCCCCCcEEEEccCCcccHHHHHHcCCeEEEEcCCC
Q 017982          270 FGCQSSQLIMVGDRPFTDIVYGNRNGFLTILTEPLS  305 (363)
Q Consensus       270 lgl~pee~vmVGDrL~TDI~~A~raGi~TIlV~p~~  305 (363)
                      +  ++++++||||+. +|+.+|+.+|+. +++.+..
T Consensus       148 l--~~~~~i~iGD~~-~Di~~~~~ag~~-v~~~~~~  179 (201)
T 4ap9_A          148 F--RDGFILAMGDGY-ADAKMFERADMG-IAVGREI  179 (201)
T ss_dssp             G--TTSCEEEEECTT-CCHHHHHHCSEE-EEESSCC
T ss_pred             c--CcCcEEEEeCCH-HHHHHHHhCCce-EEECCCC
Confidence            6  899999999998 899999999996 6665443

>3r4c_A Hydrolase, haloacid dehalogenase-like hydrolase; haloalkanoate dehalogenase enzyme superfamily, phosphohydrol hydrolase; 1.82A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0

Probab=98.34  E-value=2.5e-06  Score=77.69  Aligned_cols=46  Identities=17%  Similarity=0.151  Sum_probs=38.9

Q ss_pred             CCCEEEEcCCceeecCCCCCcchhHHHHHHHHHHhCCCeEEEEeCCC
Q 017982          182 GFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSA  228 (363)
Q Consensus       182 GIkaVV~DlDnTL~~~~~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~  228 (363)
                      -+|.++||+|+||.......+.+...++|++++ +.|+.++|+|..+
T Consensus        11 miKli~~DlDGTLl~~~~~~i~~~~~~al~~l~-~~G~~~~iaTGR~   56 (268)
T 3r4c_A           11 MIKVLLLDVDGTLLSFETHKVSQSSIDALKKVH-DSGIKIVIATGRA   56 (268)
T ss_dssp             CCCEEEECSBTTTBCTTTCSCCHHHHHHHHHHH-HTTCEEEEECSSC
T ss_pred             ceEEEEEeCCCCCcCCCCCcCCHHHHHHHHHHH-HCCCEEEEEcCCC
Confidence            489999999999986445678899999999998 5799999998764

>3ocu_A Lipoprotein E; hydrolase, outer membrane; HET: NMN; 1.35A {Haemophilus influenzae} PDB: 3ocv_A* 3ocw_A* 3ocx_A* 3ocz_A* 3ocy_A* 3sf0_A* 2hlk_A 2hll_A 3et4_A 3et5_A

Probab=98.31  E-value=3.8e-07  Score=86.71  Aligned_cols=101  Identities=15%  Similarity=0.081  Sum_probs=69.8

Q ss_pred             CCCEEEEcCCceeecC-------------C------------CCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCcc
Q 017982          182 GFKGVVFDKDNTLTAP-------------Y------------SLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDND  236 (363)
Q Consensus       182 GIkaVV~DlDnTL~~~-------------~------------~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~  236 (363)
                      +-.+||||+|+||+.-             +            ...++|++.+.|+.|+ ..|++++||||.+..    ..
T Consensus        57 ~~~avVfDIDgTlldn~~y~~~~~~~~~~f~~~~w~~wv~~~~~~~~pG~~ell~~L~-~~G~ki~ivTgR~~~----~~  131 (262)
T 3ocu_A           57 KKKAVVADLNETMLDNSPYAGWQVQNNKPFDGKDWTRWVDARQSRAVPGAVEFNNYVN-SHNGKVFYVTNRKDS----TE  131 (262)
T ss_dssp             CEEEEEECCBTTTEECHHHHHHHHHHTCCCCHHHHHHHHHHTCCEECTTHHHHHHHHH-HTTEEEEEEEEEETT----TT
T ss_pred             CCeEEEEECCCcCCCCchhhhhhccccccCCHHHHHHHHHcCCCCCCccHHHHHHHHH-HCCCeEEEEeCCCcc----ch
Confidence            4468999999999741             1            1236789999999998 579999999999631    01


Q ss_pred             HHHHHHHHHHhCCeE-----EEcccCCCch-hHHHHHHHhCCCCCcEEEEccCCcccHHH
Q 017982          237 ASKARKLEGKIGIKV-----IRHRVKKPAG-TAEEIEKHFGCQSSQLIMVGDRPFTDIVY  290 (363)
Q Consensus       237 ~~~a~~i~~~LGi~~-----I~~~~kKP~p-~~~~alk~lgl~pee~vmVGDrL~TDI~~  290 (363)
                      ...+...++.+|++.     +.....++.. .....+...|.  ..+++|||++ .|+.+
T Consensus       132 r~~T~~~L~~lGi~~~~~~~Lilr~~~~~K~~~r~~l~~~Gy--~iv~~vGD~~-~Dl~~  188 (262)
T 3ocu_A          132 KSGTIDDMKRLGFNGVEESAFYLKKDKSAKAARFAEIEKQGY--EIVLYVGDNL-DDFGN  188 (262)
T ss_dssp             HHHHHHHHHHHTCSCCSGGGEEEESSCSCCHHHHHHHHHTTE--EEEEEEESSG-GGGCS
T ss_pred             HHHHHHHHHHcCcCcccccceeccCCCCChHHHHHHHHhcCC--CEEEEECCCh-HHhcc
Confidence            356677788899974     3222223433 33444444454  3499999999 79998

>3pgv_A Haloacid dehalogenase-like hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: EPE; 2.39A {Klebsiella pneumoniae subsp}

Probab=98.31  E-value=4.2e-06  Score=77.60  Aligned_cols=51  Identities=14%  Similarity=0.024  Sum_probs=37.9

Q ss_pred             HHHHHcCCCEEEEcCCceeecCCCCCcchhHHHHHHHHHHhCCCeEEEEeCCC
Q 017982          176 AELQRRGFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSA  228 (363)
Q Consensus       176 ~~L~~~GIkaVV~DlDnTL~~~~~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~  228 (363)
                      +..+...+|.+++|+|+||.. ....+.+.+.++|++++ +.|+.++|+|..+
T Consensus        14 ~~~~~~~~kli~~DlDGTLl~-~~~~i~~~~~~al~~l~-~~G~~v~iaTGR~   64 (285)
T 3pgv_A           14 NLYFQGMYQVVASDLDGTLLS-PDHFLTPYAKETLKLLT-ARGINFVFATGRH   64 (285)
T ss_dssp             -------CCEEEEECCCCCSC-TTSCCCHHHHHHHHHHH-TTTCEEEEECSSC
T ss_pred             cccccCcceEEEEeCcCCCCC-CCCcCCHHHHHHHHHHH-HCCCEEEEEcCCC
Confidence            445577899999999999985 45567889999999998 5799998888765

>3dao_A Putative phosphatse; structural genomics, joint center for S genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE 1PE CIT; 1.80A {Eubacterium rectale}

Probab=98.22  E-value=1e-05  Score=75.11  Aligned_cols=52  Identities=23%  Similarity=0.043  Sum_probs=40.1

Q ss_pred             HHHHHcCCCEEEEcCCceeecCCCCCcchhHHHHHHHHHHhCCCeEEEEeCCC
Q 017982          176 AELQRRGFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSA  228 (363)
Q Consensus       176 ~~L~~~GIkaVV~DlDnTL~~~~~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~  228 (363)
                      +......+|.+++|+|+||.......+.+.+.++|++++ +.|+.++|+|..+
T Consensus        14 ~~~~~~~~kli~~DlDGTLl~~~~~~i~~~~~~al~~l~-~~G~~v~iaTGR~   65 (283)
T 3dao_A           14 NLYFQGMIKLIATDIDGTLVKDGSLLIDPEYMSVIDRLI-DKGIIFVVCSGRQ   65 (283)
T ss_dssp             -----CCCCEEEECCBTTTBSTTCSCCCHHHHHHHHHHH-HTTCEEEEECSSC
T ss_pred             hhhhccCceEEEEeCcCCCCCCCCCcCCHHHHHHHHHHH-HCCCEEEEEcCCC
Confidence            344577899999999999986443367899999999998 5799999998775

>3l7y_A Putative uncharacterized protein SMU.1108C; hydrolase; 2.00A {Streptococcus mutans}

Probab=98.19  E-value=6.3e-06  Score=77.24  Aligned_cols=45  Identities=16%  Similarity=0.050  Sum_probs=37.0

Q ss_pred             CCCEEEEcCCceeecCCCCCcchh-HHHHHHHHHHhCCCeEEEEeCCC
Q 017982          182 GFKGVVFDKDNTLTAPYSLTLWGP-LSSSIEQCKSVFGHDIAVFSNSA  228 (363)
Q Consensus       182 GIkaVV~DlDnTL~~~~~~~~~p~-v~e~L~~Lk~~~Gikl~IVSN~~  228 (363)
                      -+|+++||+|+||.. ....+.+. +.++|++++ +.|+.++|+|..+
T Consensus        36 ~iKli~fDlDGTLld-~~~~i~~~~~~~al~~l~-~~G~~~~iaTGR~   81 (304)
T 3l7y_A           36 SVKVIATDMDGTFLN-SKGSYDHNRFQRILKQLQ-ERDIRFVVASSNP   81 (304)
T ss_dssp             CCSEEEECCCCCCSC-TTSCCCHHHHHHHHHHHH-HTTCEEEEECSSC
T ss_pred             eeEEEEEeCCCCCCC-CCCccCHHHHHHHHHHHH-HCCCEEEEEeCCC
Confidence            589999999999985 34456676 789999998 5799999998775

>2pq0_A Hypothetical conserved protein GK1056; hyopthetical protein, structural genomics, unknown function; 2.60A {Geobacillus kaustophilus} PDB: 2qyh_A

Probab=98.05  E-value=2e-05  Score=71.50  Aligned_cols=45  Identities=29%  Similarity=0.212  Sum_probs=37.5

Q ss_pred             CCCEEEEcCCceeecCCCCCcchhHHHHHHHHHHhCCCeEEEEeCCC
Q 017982          182 GFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSA  228 (363)
Q Consensus       182 GIkaVV~DlDnTL~~~~~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~  228 (363)
                      .+|++++|+|+||.. ....+.+...++|++++ +.|+.++++|...
T Consensus         2 ~~kli~~DlDGTLl~-~~~~i~~~~~~al~~l~-~~G~~~~~aTGR~   46 (258)
T 2pq0_A            2 GRKIVFFDIDGTLLD-EQKQLPLSTIEAVRRLK-QSGVYVAIATGRA   46 (258)
T ss_dssp             CCCEEEECTBTTTBC-TTSCCCHHHHHHHHHHH-HTTCEEEEECSSC
T ss_pred             CceEEEEeCCCCCcC-CCCccCHHHHHHHHHHH-HCCCEEEEECCCC
Confidence            478999999999986 34457788999999998 5799999998765

>2rbk_A Putative uncharacterized protein; HAD-like phosphatase, unknown function; 1.00A {Bacteroides thetaiotaomicron} SCOP: c.108.1.10 PDB: 1ymq_A 2rb5_A 2rav_A 2rar_A

Probab=98.00  E-value=5.5e-05  Score=68.98  Aligned_cols=36  Identities=25%  Similarity=0.354  Sum_probs=32.4

Q ss_pred             hHHHHHHHhCCCCCcEEEEccCCcccHHHHHHcCCeE
Q 017982          262 TAEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGFLT  298 (363)
Q Consensus       262 ~~~~alk~lgl~pee~vmVGDrL~TDI~~A~raGi~T  298 (363)
                      ++..+++++|++++++++|||+. +|+.+++.+|+..
T Consensus       191 ~~~~~~~~~~~~~~~~~~iGD~~-nD~~~~~~ag~~v  226 (261)
T 2rbk_A          191 GIDEIIRHFGIKLEETMSFGDGG-NDISMLRHAAIGV  226 (261)
T ss_dssp             HHHHHHHHHTCCGGGEEEEECSG-GGHHHHHHSSEEE
T ss_pred             HHHHHHHHcCCCHHHEEEECCCH-HHHHHHHHcCceE
Confidence            35788999999999999999998 8999999999843

>3gyg_A NTD biosynthesis operon putative hydrolase NTDB; PF05116, PF08282, MCSG, PSI-2, haloacid dehalogenase-like HY structural genomics; 2.45A {Bacillus subtilis subsp}

Probab=97.95  E-value=1.4e-05  Score=73.93  Aligned_cols=96  Identities=11%  Similarity=0.055  Sum_probs=67.4

Q ss_pred             CcchhHHHHHHHHHHhCCCeEEEEeCCCCCCC-----C---C-----ccHHHHHHHHHHhCCeEEE--------------
Q 017982          201 TLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYE-----Y---D-----NDASKARKLEGKIGIKVIR--------------  253 (363)
Q Consensus       201 ~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~-----~---d-----p~~~~a~~i~~~LGi~~I~--------------  253 (363)
                      ...+++.+.++.+++..|+.+++.|+......     +   +     .....+..+++.+|+...+              
T Consensus       122 ~~~~~v~e~l~~l~~~~g~~l~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~  201 (289)
T 3gyg_A          122 FSKEKVEKLVKQLHENHNILLNPQTQLGKSRYKHNFYYQEQDEINDKKNLLAIEKICEEYGVSVNINRCNPLAGDPEDSY  201 (289)
T ss_dssp             CCHHHHHHHHHHHHHHSSCCCEEGGGTCGGGTTCCEEEECCCHHHHHHHHHHHHHHHHHHTEEEEEEECCGGGTCCTTEE
T ss_pred             CCHHHHHHHHHHHHhhhCceeeecccccccceEEEEEEeccccccchHHHHHHHHHHHHcCCCEEEEEccccccCCCCce
Confidence            34678889999888545888899887621000     0   0     0123455667777765211              


Q ss_pred             ----cccCCCch-hHHHHHHHhCCCCCcEEEEccCCcccHHHHHHcCCe
Q 017982          254 ----HRVKKPAG-TAEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGFL  297 (363)
Q Consensus       254 ----~~~kKP~p-~~~~alk~lgl~pee~vmVGDrL~TDI~~A~raGi~  297 (363)
                          ...++|.+ .+..+++++|+++++++||||+. +|+.+++.+|+.
T Consensus       202 ~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~GDs~-~D~~~~~~ag~~  249 (289)
T 3gyg_A          202 DVDFIPIGTGKNEIVTFMLEKYNLNTERAIAFGDSG-NDVRMLQTVGNG  249 (289)
T ss_dssp             EEEEEESCCSHHHHHHHHHHHHTCCGGGEEEEECSG-GGHHHHTTSSEE
T ss_pred             EEEEEeCCCCHHHHHHHHHHHcCCChhhEEEEcCCH-HHHHHHHhCCcE
Confidence                12345665 56889999999999999999999 899999999954

>3zx4_A MPGP, mannosyl-3-phosphoglycerate phosphatase; hydrolase, haloalkanoid acid dehalogenase-like phosphatase, crystallographic snapshot; HET: 2M8; 1.74A {Thermus thermophilus} PDB: 3zty_A 3zu6_A* 3ztw_A* 3zw7_A* 3zwd_A* 3zwk_A 3zup_A* 3zx5_A*

Probab=97.91  E-value=2.3e-05  Score=71.54  Aligned_cols=35  Identities=9%  Similarity=0.063  Sum_probs=32.1

Q ss_pred             hHHHHHHHhCCCC--CcEEEEccCCcccHHHHHHcCCe
Q 017982          262 TAEEIEKHFGCQS--SQLIMVGDRPFTDIVYGNRNGFL  297 (363)
Q Consensus       262 ~~~~alk~lgl~p--ee~vmVGDrL~TDI~~A~raGi~  297 (363)
                      ++..+++++|+++  +++++|||+. +|+.+++.+|+.
T Consensus       180 ~l~~l~~~~~i~~~~~~~~~~GD~~-nD~~m~~~ag~~  216 (259)
T 3zx4_A          180 AVARLRALWPDPEEARFAVGLGDSL-NDLPLFRAVDLA  216 (259)
T ss_dssp             HHHHHHHTCSSHHHHTSEEEEESSG-GGHHHHHTSSEE
T ss_pred             HHHHHHHHhCCCCCCceEEEEeCCH-HHHHHHHhCCCe
Confidence            4688999999999  9999999998 899999999975

>3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus}

Probab=97.76  E-value=0.00013  Score=76.94  Aligned_cols=109  Identities=16%  Similarity=0.224  Sum_probs=85.8

Q ss_pred             HHHHHcCCCEEEEcCCceeecC--CCCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCeEEE
Q 017982          176 AELQRRGFKGVVFDKDNTLTAP--YSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKVIR  253 (363)
Q Consensus       176 ~~L~~~GIkaVV~DlDnTL~~~--~~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~~I~  253 (363)
                      +.+.+.|.+.+.+..|+++...  -...+.|++.+++++|+ +.|++++++|+..        ...++.+.+.+|++.++
T Consensus       430 ~~~~~~g~~~l~va~~~~~~G~i~~~D~l~~~~~~~i~~L~-~~Gi~v~~~TGd~--------~~~a~~ia~~lgi~~~~  500 (645)
T 3j08_A          430 EKLEREAKTAVIVARNGRVEGIIAVSDTLKESAKPAVQELK-RMGIKVGMITGDN--------WRSAEAISRELNLDLVI  500 (645)
T ss_dssp             HHHHTTTCCCEEEEETTEEEEEEEEECCCTTTHHHHHHHHH-HTTCEEEEECSSC--------HHHHHHHHHHHTCSEEE
T ss_pred             HHHHhcCCeEEEEEECCEEEEEEEecCCchhHHHHHHHHHH-HCCCEEEEEeCCC--------HHHHHHHHHHcCCCEEE
Confidence            4566789999999999887642  34567899999999998 6899999999885        46788999999999775


Q ss_pred             cccCCCchhHHHHHHHhCCCCCcEEEEccCCcccHHHHHHcCCe
Q 017982          254 HRVKKPAGTAEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGFL  297 (363)
Q Consensus       254 ~~~kKP~p~~~~alk~lgl~pee~vmVGDrL~TDI~~A~raGi~  297 (363)
                      ... .|... ..+++.+.-. ++++||||.. +|+.+.+.+|+.
T Consensus       501 ~~~-~P~~K-~~~v~~l~~~-~~v~~vGDg~-ND~~al~~A~vg  540 (645)
T 3j08_A          501 AEV-LPHQK-SEEVKKLQAK-EVVAFVGDGI-NDAPALAQADLG  540 (645)
T ss_dssp             CSC-CTTCH-HHHHHHHTTT-CCEEEEECSS-SCHHHHHHSSEE
T ss_pred             EeC-CHHhH-HHHHHHHhhC-CeEEEEeCCH-hHHHHHHhCCEE
Confidence            433 45542 2455666555 8999999998 899999999943

>4g63_A Cytosolic IMP-GMP specific 5'-nucleotidase; structural genomics, PSI-biology, northeast structural genom consortium, NESG; 2.70A {Legionella pneumophila subsp} PDB: 2bde_A

Probab=97.65  E-value=0.00029  Score=71.94  Aligned_cols=96  Identities=19%  Similarity=0.298  Sum_probs=68.8

Q ss_pred             chhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHH-h------CC------eEEEcccCCCc---------
Q 017982          203 WGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGK-I------GI------KVIRHRVKKPA---------  260 (363)
Q Consensus       203 ~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~-L------Gi------~~I~~~~kKP~---------  260 (363)
                      .|++..||++|+ +.|.+++++||+.-        ..+..++.. +      |-      ++|...++||.         
T Consensus       188 ~~~l~~~L~~lr-~~GKklFLiTNS~~--------~y~~~~M~y~~~~~~~~g~dWrdlFDvVIv~A~KP~FF~~~~~~~  258 (470)
T 4g63_A          188 EKEVVEGLKHFI-RYGKKIFILTNSEY--------SYSKLLLDYALSPFLDKGEHWQGLFEFVITLANKPRFFYDNLRFL  258 (470)
T ss_dssp             CHHHHHHHHHHH-TTTCEEEEECSSCH--------HHHHHHHHHHTGGGSCTTCCGGGGCSEEEESCCTTHHHHSCCCEE
T ss_pred             CHhHHHHHHHHH-HcCCeEEEeeCCCc--------hHHHHHHHhhcccCCCCCCChhhhcCEEEECCCCCCcccCCCcce
Confidence            378889999998 68999999999972        333333322 2      21      13333344443         


Q ss_pred             ----------------------h-hHHHHHHHhCCCCCcEEEEccCCcccHHHHHH-cCCeEEEEcCCCCC
Q 017982          261 ----------------------G-TAEEIEKHFGCQSSQLIMVGDRPFTDIVYGNR-NGFLTILTEPLSLA  307 (363)
Q Consensus       261 ----------------------p-~~~~alk~lgl~pee~vmVGDrL~TDI~~A~r-aGi~TIlV~p~~~~  307 (363)
                                            . ......+.+|..-.++++|||.++.||..++. .|.+|++|-|--..
T Consensus       259 ~v~~~~g~l~~~~~~~~~~vY~gGn~~~l~~llg~~g~~VLY~GDhi~~Di~~~kk~~gWrT~~Ii~EL~~  329 (470)
T 4g63_A          259 SVNPENGTMTNVHGPIVPGVYQGGNAKKFTEDLGVGGDEILYIGDHIYGDILRLKKDCNWRTALVVEELGE  329 (470)
T ss_dssp             EECTTTCCEEECCSSCCSEEEEECCHHHHHHHTTCCGGGEEEEESCCCSCHHHHHHSCCCEEEEECTTHHH
T ss_pred             EEECCCCcccccccccCCceeecCcHHHHHHHhCCCCCeEEEECCchHHHHHhhhhccCCeEEEEhHHHHH
Confidence                                  1 14567778899889999999999999999885 79999999876533

>3kc2_A Uncharacterized protein YKR070W; HAD-like, mitochondral protein, PSI, MCSG, structural genomi protein structure initiative; HET: MSE; 1.55A {Saccharomyces cerevisiae} PDB: 3rf6_A*

Probab=97.58  E-value=8.1e-05  Score=73.03  Aligned_cols=104  Identities=15%  Similarity=0.213  Sum_probs=71.8

Q ss_pred             cCCCEEEEcCCceeecCCCCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCeE----EEccc
Q 017982          181 RGFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKV----IRHRV  256 (363)
Q Consensus       181 ~GIkaVV~DlDnTL~~~~~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~~----I~~~~  256 (363)
                      ...++++||+|+||..  .....|++.++|+.|+ +.|++++++||+.+..    ...+++.+.+.+|+++    |.. .
T Consensus        11 ~~~~~~l~D~DGvl~~--g~~~~p~a~~~l~~l~-~~g~~~~~vTNn~~~~----~~~~~~~l~~~lgi~~~~~~i~t-s   82 (352)
T 3kc2_A           11 SKKIAFAFDIDGVLFR--GKKPIAGASDALKLLN-RNKIPYILLTNGGGFS----ERARTEFISSKLDVDVSPLQIIQ-S   82 (352)
T ss_dssp             -CCEEEEECCBTTTEE--TTEECTTHHHHHHHHH-HTTCCEEEECSCCSSC----HHHHHHHHHHHHTSCCCGGGEEC-T
T ss_pred             ccCCEEEEECCCeeEc--CCeeCcCHHHHHHHHH-HCCCEEEEEeCCCCCC----chHHHHHHHHhcCCCCChhhEee-h
Confidence            3578999999999974  4457899999999998 6899999999997422    2456677776899863    221 1


Q ss_pred             CCCchhHHHHHHHhCCCCCcEEEEccCCcccHHHHHHcCCeEEEE
Q 017982          257 KKPAGTAEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGFLTILT  301 (363)
Q Consensus       257 kKP~p~~~~alk~lgl~pee~vmVGDrL~TDI~~A~raGi~TIlV  301 (363)
                      .-+..   ..++    ....+.+||-.-  .......+|+..+..
T Consensus        83 ~~~~~---~~~~----~~~~v~viG~~~--l~~~l~~~G~~~v~~  118 (352)
T 3kc2_A           83 HTPYK---SLVN----KYSRILAVGTPS--VRGVAEGYGFQDVVH  118 (352)
T ss_dssp             TGGGG---GGTT----TCSEEEEESSTT--HHHHHHHHTCSEEEE
T ss_pred             HHHHH---HHHh----cCCEEEEECCHH--HHHHHHhCCCeEecc
Confidence            11111   1111    236788999764  466677889987753

>3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus}

Probab=97.56  E-value=0.00038  Score=74.15  Aligned_cols=108  Identities=16%  Similarity=0.239  Sum_probs=85.2

Q ss_pred             HHHHHcCCCEEEEcCCceeecC--CCCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCeEEE
Q 017982          176 AELQRRGFKGVVFDKDNTLTAP--YSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKVIR  253 (363)
Q Consensus       176 ~~L~~~GIkaVV~DlDnTL~~~--~~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~~I~  253 (363)
                      +.+.+.|.+.+.+..|+++...  -...+.|++.+++++|+ +.|++++++|+..        ...++.+.+.+|++.++
T Consensus       508 ~~~~~~g~~~~~va~~~~~~G~i~i~D~~~~~~~~~i~~l~-~~Gi~v~~~TGd~--------~~~a~~ia~~lgi~~~~  578 (723)
T 3j09_A          508 EKLEREAKTAVIVARNGRVEGIIAVSDTLKESAKPAVQELK-RMGIKVGMITGDN--------WRSAEAISRELNLDLVI  578 (723)
T ss_dssp             HHHHTTTCEEEEEEETTEEEEEEEEECCSCTTHHHHHHHHH-HTTCEEEEECSSC--------HHHHHHHHHHHTCSEEE
T ss_pred             HHHHhcCCeEEEEEECCEEEEEEeecCCcchhHHHHHHHHH-HCCCEEEEECCCC--------HHHHHHHHHHcCCcEEE
Confidence            4566789999999999987642  34567899999999998 6899999999885        46788999999999775


Q ss_pred             cccCCCchhHHHHHHHhCCCCCcEEEEccCCcccHHHHHHcCC
Q 017982          254 HRVKKPAGTAEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGF  296 (363)
Q Consensus       254 ~~~kKP~p~~~~alk~lgl~pee~vmVGDrL~TDI~~A~raGi  296 (363)
                      ... .|... ..+++.+.-. ++++||||.. +|+.+-+.+|+
T Consensus       579 ~~~-~P~~K-~~~v~~l~~~-~~v~~vGDg~-ND~~al~~A~v  617 (723)
T 3j09_A          579 AEV-LPHQK-SEEVKKLQAK-EVVAFVGDGI-NDAPALAQADL  617 (723)
T ss_dssp             CSC-CTTCH-HHHHHHHTTT-CCEEEEECSS-TTHHHHHHSSE
T ss_pred             ccC-CHHHH-HHHHHHHhcC-CeEEEEECCh-hhHHHHhhCCE
Confidence            433 45542 2455555555 8999999998 89999999994

>2obb_A Hypothetical protein; structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic unknown function; 2.20A {Bacteroides thetaiotaomicron} SCOP: c.108.1.25

Probab=97.52  E-value=0.0001  Score=63.87  Aligned_cols=95  Identities=13%  Similarity=0.081  Sum_probs=62.1

Q ss_pred             CCCEEEEcCCceeecCCC---CCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCeEEEcccCC
Q 017982          182 GFKGVVFDKDNTLTAPYS---LTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKVIRHRVKK  258 (363)
Q Consensus       182 GIkaVV~DlDnTL~~~~~---~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~~I~~~~kK  258 (363)
                      +++++++|+|+||.....   ....|++.++|++|+ +.|+.++|+|+..+     .....+...++.+|+++.......
T Consensus         2 ~~k~i~~DlDGTL~~~~~~~i~~~~~~~~~al~~l~-~~G~~iii~TgR~~-----~~~~~~~~~l~~~gi~~~~I~~n~   75 (142)
T 2obb_A            2 NAMTIAVDFDGTIVEHRYPRIGEEIPFAVETLKLLQ-QEKHRLILWSVREG-----ELLDEAIEWCRARGLEFYAANKDY   75 (142)
T ss_dssp             CCCEEEECCBTTTBCSCTTSCCCBCTTHHHHHHHHH-HTTCEEEECCSCCH-----HHHHHHHHHHHTTTCCCSEESSSS
T ss_pred             CCeEEEEECcCCCCCCCCccccccCHHHHHHHHHHH-HCCCEEEEEeCCCc-----ccHHHHHHHHHHcCCCeEEEEcCC
Confidence            578999999999986322   135689999999998 68999999999862     012345566777888753223455


Q ss_pred             CchhHHHHHHHhCCCCCcEEEEccCC
Q 017982          259 PAGTAEEIEKHFGCQSSQLIMVGDRP  284 (363)
Q Consensus       259 P~p~~~~alk~lgl~pee~vmVGDrL  284 (363)
                      |....  ......-.+..-++|.|+.
T Consensus        76 P~~~~--~~~~~~rK~~~~~fIDDR~   99 (142)
T 2obb_A           76 PEEER--DHQGFSRKLKADLFIDDRN   99 (142)
T ss_dssp             TTC-----CCSCCSSCCCSEEECTTS
T ss_pred             chhhh--cchhhcCCcCCCEEeeccc
Confidence            65421  0001112356677899876

>3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp}

Probab=97.36  E-value=0.00027  Score=75.71  Aligned_cols=110  Identities=17%  Similarity=0.207  Sum_probs=84.8

Q ss_pred             HHHHHcCCCEEEEcCCceeecC--CCCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCeEEE
Q 017982          176 AELQRRGFKGVVFDKDNTLTAP--YSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKVIR  253 (363)
Q Consensus       176 ~~L~~~GIkaVV~DlDnTL~~~--~~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~~I~  253 (363)
                      +.+.+.|.+++.+..|+++...  -...+.|++.+++++|+ +.|++++++|+..        ...++.+.+.+|++.++
T Consensus       527 ~~~~~~G~~vl~va~d~~~~G~i~i~D~i~~~~~~aI~~L~-~~Gi~v~mlTGd~--------~~~a~~ia~~lgi~~v~  597 (736)
T 3rfu_A          527 DELRGKGASVMFMAVDGKTVALLVVEDPIKSSTPETILELQ-QSGIEIVMLTGDS--------KRTAEAVAGTLGIKKVV  597 (736)
T ss_dssp             HHHHHTTCEEEEEEETTEEEEEEEEECCBCSSHHHHHHHHH-HHTCEEEEECSSC--------HHHHHHHHHHHTCCCEE
T ss_pred             HHHHhcCCeEEEEEECCEEEEEEEeeccchhhHHHHHHHHH-HCCCeEEEECCCC--------HHHHHHHHHHcCCCEEE
Confidence            5677899999999999987642  34567889999999998 5799999999875        46788999999998765


Q ss_pred             cccCCCchhHHHHHHHhCCCCCcEEEEccCCcccHHHHHHcCCe
Q 017982          254 HRVKKPAGTAEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGFL  297 (363)
Q Consensus       254 ~~~kKP~p~~~~alk~lgl~pee~vmVGDrL~TDI~~A~raGi~  297 (363)
                      .. -.|... .++++.+.-..+.++||||.. +|+.+-+.+|+.
T Consensus       598 a~-~~P~~K-~~~v~~l~~~g~~V~~vGDG~-ND~paL~~AdvG  638 (736)
T 3rfu_A          598 AE-IMPEDK-SRIVSELKDKGLIVAMAGDGV-NDAPALAKADIG  638 (736)
T ss_dssp             CS-CCHHHH-HHHHHHHHHHSCCEEEEECSS-TTHHHHHHSSEE
T ss_pred             Ee-cCHHHH-HHHHHHHHhcCCEEEEEECCh-HhHHHHHhCCEE
Confidence            33 355542 233444444567899999998 899999999853

>1zjj_A Hypothetical protein PH1952; alpha/beta hydrolase fold, HAD superfamily, structural genom riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii}

Probab=97.21  E-value=0.00051  Score=62.71  Aligned_cols=99  Identities=18%  Similarity=0.159  Sum_probs=60.8

Q ss_pred             CCEEEEcCCceeecCCCCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCeE----EEcccCC
Q 017982          183 FKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKV----IRHRVKK  258 (363)
Q Consensus       183 IkaVV~DlDnTL~~~~~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~~----I~~~~kK  258 (363)
                      ++++++|+|+||..  .....+++.++|++++ +.|++++++||+....     .......+..+|++.    +..    
T Consensus         1 ik~i~~D~DGtL~~--~~~~~~~~~~~l~~l~-~~g~~~~~~T~r~~~~-----~~~~~~~l~~lg~~~~~~~i~~----   68 (263)
T 1zjj_A            1 MVAIIFDMDGVLYR--GNRAIPGVRELIEFLK-ERGIPFAFLTNNSTKT-----PEMYREKLLKMGIDVSSSIIIT----   68 (263)
T ss_dssp             CEEEEEECBTTTEE--TTEECTTHHHHHHHHH-HHTCCEEEEESCCSSC-----HHHHHHHHHTTTCCCCGGGEEE----
T ss_pred             CeEEEEeCcCceEe--CCEeCccHHHHHHHHH-HCCCeEEEEeCCCCCC-----HHHHHHHHHHCCCCCChhhEEe----
Confidence            57899999999975  3334589999999998 5799999999997311     122333334678752    211    


Q ss_pred             CchhHHHHHHHhCCCCCcEEEEccCCcccHHHHHHcCC
Q 017982          259 PAGTAEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGF  296 (363)
Q Consensus       259 P~p~~~~alk~lgl~pee~vmVGDrL~TDI~~A~raGi  296 (363)
                      ........++... ...++.+||+.-  ........|+
T Consensus        69 ~~~~~~~~l~~~~-~~~~v~viG~~~--l~~~l~~~G~  103 (263)
T 1zjj_A           69 SGLATRLYMSKHL-DPGKIFVIGGEG--LVKEMQALGW  103 (263)
T ss_dssp             HHHHHHHHHHHHS-CCCCEEEESCHH--HHHHHHHHTS
T ss_pred             cHHHHHHHHHHhC-CCCEEEEEcCHH--HHHHHHHcCC
Confidence            1112223333332 335778888752  4555555665

>1xpj_A Hypothetical protein; structural genomics, MCSG, protein STR initiative, PSI, midwest center for structural genomics, UN function; HET: TLA; 2.30A {Vibrio cholerae} SCOP: c.108.1.18

Probab=97.16  E-value=0.00059  Score=56.73  Aligned_cols=45  Identities=18%  Similarity=0.249  Sum_probs=37.7

Q ss_pred             CCEEEEcCCceeecCCCC-----CcchhHHHHHHHHHHhCCCeEEEEeCCC
Q 017982          183 FKGVVFDKDNTLTAPYSL-----TLWGPLSSSIEQCKSVFGHDIAVFSNSA  228 (363)
Q Consensus       183 IkaVV~DlDnTL~~~~~~-----~~~p~v~e~L~~Lk~~~Gikl~IVSN~~  228 (363)
                      +|++++|+|+||......     .+.+++.++|++++ +.|++++|+|+..
T Consensus         1 ik~i~~DlDGTL~~~~~~~~~~~~~~~~~~~~l~~l~-~~Gi~~~iaTGR~   50 (126)
T 1xpj_A            1 MKKLIVDLDGTLTQANTSDYRNVLPRLDVIEQLREYH-QLGFEIVISTARN   50 (126)
T ss_dssp             CCEEEECSTTTTBCCCCSCGGGCCBCHHHHHHHHHHH-HTTCEEEEEECTT
T ss_pred             CCEEEEecCCCCCCCCCCccccCCCCHHHHHHHHHHH-hCCCeEEEEeCCC
Confidence            588999999999864332     46689999999998 5799999999986

>2hx1_A Predicted sugar phosphatases of the HAD superfamily; ZP_00311070.1, possible sugar phosphatase, structural genomics; HET: MSE EPE; 2.10A {Cytophaga hutchinsonii}

Probab=97.04  E-value=0.00087  Score=61.59  Aligned_cols=61  Identities=20%  Similarity=0.260  Sum_probs=47.9

Q ss_pred             CCCEEEEcCCceeecCCCCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCe
Q 017982          182 GFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK  250 (363)
Q Consensus       182 GIkaVV~DlDnTL~~~~~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~  250 (363)
                      .+++++||+|+||..  ....++++.++|++++ +.|++++++||+.+.     ....+...++.+|++
T Consensus        13 ~~k~i~~D~DGtL~~--~~~~~~~~~~~l~~l~-~~g~~~~~~Tn~~~r-----~~~~~~~~l~~lg~~   73 (284)
T 2hx1_A           13 KYKCIFFDAFGVLKT--YNGLLPGIENTFDYLK-AQGQDYYIVTNDASR-----SPEQLADSYHKLGLF   73 (284)
T ss_dssp             GCSEEEECSBTTTEE--TTEECTTHHHHHHHHH-HTTCEEEEEECCCSS-----CHHHHHHHHHHTTCT
T ss_pred             cCCEEEEcCcCCcCc--CCeeChhHHHHHHHHH-HCCCEEEEEeCCCCc-----CHHHHHHHHHHCCcC
Confidence            589999999999975  3446789999999998 589999999997642     134555666777876

>2oyc_A PLP phosphatase, pyridoxal phosphate phosphatase; structural genomics, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI-2; 1.72A {Homo sapiens} PDB: 2p27_A 2p69_A* 2cft_A* 2cfs_A 2cfr_A*

Probab=96.94  E-value=0.0012  Score=61.57  Aligned_cols=62  Identities=18%  Similarity=0.130  Sum_probs=48.1

Q ss_pred             cCCCEEEEcCCceeecCCCCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCe
Q 017982          181 RGFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK  250 (363)
Q Consensus       181 ~GIkaVV~DlDnTL~~~~~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~  250 (363)
                      ..++++++|+|+||..  ...+.|++.++|++|+ +.|++++++||+.+..     ...+...++.+|++
T Consensus        19 ~~~k~i~~D~DGTL~~--~~~~~~~~~~~l~~l~-~~g~~~~~~Tn~~~~~-----~~~~~~~~~~~g~~   80 (306)
T 2oyc_A           19 GRAQGVLFDCDGVLWN--GERAVPGAPELLERLA-RAGKAALFVSNNSRRA-----RPELALRFARLGFG   80 (306)
T ss_dssp             HHCSEEEECSBTTTEE--TTEECTTHHHHHHHHH-HTTCEEEEEECCCSSC-----HHHHHHHHHHTTCC
T ss_pred             hhCCEEEECCCCcEec--CCccCcCHHHHHHHHH-HCCCeEEEEECCCCCC-----HHHHHHHHHhcCCC
Confidence            3699999999999974  4457889999999998 6899999999987521     34444555677775

>3qle_A TIM50P; chaperone, mitochondrion, preprotein translocation; HET: 1PE; 1.83A {Saccharomyces cerevisiae EC1118}

Probab=96.85  E-value=0.00029  Score=64.42  Aligned_cols=128  Identities=15%  Similarity=0.098  Sum_probs=83.3

Q ss_pred             cCCCEEEEcCCceeecC--C-----CCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCe--E
Q 017982          181 RGFKGVVFDKDNTLTAP--Y-----SLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK--V  251 (363)
Q Consensus       181 ~GIkaVV~DlDnTL~~~--~-----~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~--~  251 (363)
                      .+-..+|+|+|+||...  .     ....-|++.++|+++.  .++.++|.|.+.        ...+..+++.++..  +
T Consensus        32 ~~~~tLVLDLDeTLvh~~~~~~~~~~v~~RPgl~eFL~~l~--~~yeivI~Tas~--------~~ya~~vl~~LDp~~~~  101 (204)
T 3qle_A           32 QRPLTLVITLEDFLVHSEWSQKHGWRTAKRPGADYFLGYLS--QYYEIVLFSSNY--------MMYSDKIAEKLDPIHAF  101 (204)
T ss_dssp             CCSEEEEEECBTTTEEEEEETTTEEEEEECTTHHHHHHHHT--TTEEEEEECSSC--------HHHHHHHHHHTSTTCSS
T ss_pred             CCCeEEEEeccccEEeeeccccCceeEEeCCCHHHHHHHHH--hCCEEEEEcCCc--------HHHHHHHHHHhCCCCCe
Confidence            46679999999999852  1     1245799999999997  378999999986        47888999988864  2


Q ss_pred             EE-----cccCCCchhHHHHHHHhCCCCCcEEEEccCCcccHHHHHHcCCeEEEEcCCCCCCchhHHHHHHHHHHH
Q 017982          252 IR-----HRVKKPAGTAEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGFLTILTEPLSLAEEPFIVRQVRKLEVT  322 (363)
Q Consensus       252 I~-----~~~kKP~p~~~~alk~lgl~pee~vmVGDrL~TDI~~A~raGi~TIlV~p~~~~~e~~~t~~~R~lE~~  322 (363)
                      +.     ..+..-...+.+.++.+|.++++|++|.|+.. -+.....+|   |.|.+.....+.--..+...||..
T Consensus       102 f~~rl~R~~c~~~~g~y~KdL~~Lgrdl~~vIiIDDsp~-~~~~~p~N~---I~I~~~~~~~D~eL~~L~~~L~~L  173 (204)
T 3qle_A          102 VSYNLFKEHCVYKDGVHIKDLSKLNRDLSKVIIIDTDPN-SYKLQPENA---IPMEPWNGEADDKLVRLIPFLEYL  173 (204)
T ss_dssp             EEEEECGGGSEEETTEEECCGGGSCSCGGGEEEEESCTT-TTTTCGGGE---EECCCCCSSCCCHHHHHHHHHHHH
T ss_pred             EEEEEEecceeEECCeeeecHHHhCCChHHEEEEECCHH-HHhhCccCc---eEeeeECCCCChhHHHHHHHHHHH
Confidence            21     11211111234567788999999999999983 333333334   555544322222233455666653

>3bwv_A Putative 5'(3')-deoxyribonucleotidase; NP_764060.1, deoxyribonucleotidase-like protein; HET: MSE; 1.55A {Staphylococcus epidermidis}

Probab=96.73  E-value=0.0033  Score=53.82  Aligned_cols=82  Identities=12%  Similarity=0.108  Sum_probs=51.6

Q ss_pred             CCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHH-HHHHhCC----eEEEcccCCCchhHHHHHHHhCCC
Q 017982          199 SLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARK-LEGKIGI----KVIRHRVKKPAGTAEEIEKHFGCQ  273 (363)
Q Consensus       199 ~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~-i~~~LGi----~~I~~~~kKP~p~~~~alk~lgl~  273 (363)
                      ...++|++.+.|+.|+ + +++++|+||+...   ......... +...++.    ..++.+. + .        ++   
T Consensus        67 ~~~~~pg~~e~L~~L~-~-~~~~~i~T~~~~~---~~~~~~~~~~l~~~f~~~~~~~~i~~~~-~-~--------~l---  128 (180)
T 3bwv_A           67 NLDVMPHAQEVVKQLN-E-HYDIYIATAAMDV---PTSFHDKYEWLLEYFPFLDPQHFVFCGR-K-N--------II---  128 (180)
T ss_dssp             SCCBCTTHHHHHHHHT-T-TSEEEEEECC--C---CSHHHHHHHHHHHHCTTSCGGGEEECSC-G-G--------GB---
T ss_pred             cCCCCcCHHHHHHHHH-h-cCCEEEEeCCCCc---chHHHHHHHHHHHHcCCCCcccEEEeCC-c-C--------ee---
Confidence            3467899999999998 4 5899999998310   000122233 3333443    2333221 1 0        11   


Q ss_pred             CCcEEEEccCCcccHHHHHHcCCeEEEEcC
Q 017982          274 SSQLIMVGDRPFTDIVYGNRNGFLTILTEP  303 (363)
Q Consensus       274 pee~vmVGDrL~TDI~~A~raGi~TIlV~p  303 (363)
                       ++++||||+. +|+.  ..+| .+|+|..
T Consensus       129 -~~~l~ieDs~-~~i~--~aaG-~~i~~~~  153 (180)
T 3bwv_A          129 -LADYLIDDNP-KQLE--IFEG-KSIMFTA  153 (180)
T ss_dssp             -CCSEEEESCH-HHHH--HCSS-EEEEECC
T ss_pred             -cccEEecCCc-chHH--HhCC-CeEEeCC
Confidence             7899999999 7885  5689 9999974

>1xvi_A MPGP, YEDP, putative mannosyl-3-phosphoglycerate phosphatase; hypothetical protein, conserved protein, phophatase-like domain; HET: 1PE PG4 PGE; 2.26A {Escherichia coli K12} SCOP: c.108.1.10

Probab=96.64  E-value=0.0024  Score=59.12  Aligned_cols=59  Identities=17%  Similarity=0.198  Sum_probs=47.2

Q ss_pred             cCCCEEEEcCCceeecCCCCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCC
Q 017982          181 RGFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGI  249 (363)
Q Consensus       181 ~GIkaVV~DlDnTL~~~~~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi  249 (363)
                      +.++.+++|+|+||... .....+...++|++|+ +.|+.++|+|+.+        ...+..+.+.+++
T Consensus         7 m~~~li~~DlDGTLl~~-~~~~~~~~~~~l~~l~-~~G~~~~iaTGR~--------~~~~~~~~~~l~~   65 (275)
T 1xvi_A            7 QQPLLVFSDLDGTLLDS-HSYDWQPAAPWLTRLR-EANVPVILCSSKT--------SAEMLYLQKTLGL   65 (275)
T ss_dssp             CCCEEEEEECTTTTSCS-SCCSCCTTHHHHHHHH-HTTCCEEEECSSC--------HHHHHHHHHHTTC
T ss_pred             cCceEEEEeCCCCCCCC-CCcCCHHHHHHHHHHH-HCCCeEEEEcCCC--------HHHHHHHHHHcCC
Confidence            46899999999999853 3345577899999998 5799999999986        3566777788776

>1rkq_A Hypothetical protein YIDA; two domain structure with beta-alpha sandwich. stucture contains A magnesium ION., PSI, protein structure initiative; 1.40A {Escherichia coli} SCOP: c.108.1.10

Probab=96.57  E-value=0.0029  Score=58.53  Aligned_cols=57  Identities=14%  Similarity=0.181  Sum_probs=44.7

Q ss_pred             CCEEEEcCCceeecCCCCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCC
Q 017982          183 FKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGI  249 (363)
Q Consensus       183 IkaVV~DlDnTL~~~~~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi  249 (363)
                      +|.+++|+|+||.. ....+.+...++|++++ +.|+.++|+|..+.        ..+..+.+.+++
T Consensus         5 ~kli~~DlDGTLl~-~~~~i~~~~~~aL~~l~-~~Gi~vviaTGR~~--------~~~~~~~~~l~l   61 (282)
T 1rkq_A            5 IKLIAIDMDGTLLL-PDHTISPAVKNAIAAAR-ARGVNVVLTTGRPY--------AGVHNYLKELHM   61 (282)
T ss_dssp             CCEEEECCCCCCSC-TTSCCCHHHHHHHHHHH-HTTCEEEEECSSCG--------GGTHHHHHHTTC
T ss_pred             ceEEEEeCCCCCCC-CCCcCCHHHHHHHHHHH-HCCCEEEEEcCCCH--------HHHHHHHHHhCC
Confidence            78999999999985 44567899999999998 57999999998852        234455556554

>1nrw_A Hypothetical protein, haloacid dehalogenase-like hydrolase; structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: c.108.1.10

Probab=96.52  E-value=0.0051  Score=56.85  Aligned_cols=58  Identities=21%  Similarity=0.187  Sum_probs=45.6

Q ss_pred             CCEEEEcCCceeecCCCCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCe
Q 017982          183 FKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK  250 (363)
Q Consensus       183 IkaVV~DlDnTL~~~~~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~  250 (363)
                      +|+|++|+|+||.. ....+.+...++|++++ +.|+.++++|...        ...+..+.+.++++
T Consensus         4 ikli~~DlDGTLl~-~~~~i~~~~~~al~~l~-~~G~~~~iaTGR~--------~~~~~~~~~~l~~~   61 (288)
T 1nrw_A            4 MKLIAIDLDGTLLN-SKHQVSLENENALRQAQ-RDGIEVVVSTGRA--------HFDVMSIFEPLGIK   61 (288)
T ss_dssp             CCEEEEECCCCCSC-TTSCCCHHHHHHHHHHH-HTTCEEEEECSSC--------HHHHHHHHGGGTCC
T ss_pred             eEEEEEeCCCCCCC-CCCccCHHHHHHHHHHH-HCCCEEEEEeCCC--------HHHHHHHHHHcCCC
Confidence            78999999999985 34457788999999998 5899999999885        24556666666653

>2zos_A MPGP, mannosyl-3-phosphoglycerate phosphatase; haloacid dehalogenase like hydrolase, mannosylglycerate, cytoplasm, hydrolase, magnesium; 1.70A {Pyrococcus horikoshii} PDB: 1wzc_A

Probab=96.47  E-value=0.0026  Score=57.94  Aligned_cols=56  Identities=21%  Similarity=0.351  Sum_probs=43.8

Q ss_pred             CCEEEEcCCceeecCCCCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCe
Q 017982          183 FKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK  250 (363)
Q Consensus       183 IkaVV~DlDnTL~~~~~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~  250 (363)
                      +|.+++|+|+||. . ...+ +.+.++|++|+ +.|+.++|+|+.+        ...+..+.+.+|++
T Consensus         2 ikli~~DlDGTLl-~-~~~~-~~~~~~l~~l~-~~g~~~~i~Tgr~--------~~~~~~~~~~~~~~   57 (249)
T 2zos_A            2 IRLIFLDIDKTLI-P-GYEP-DPAKPIIEELK-DMGFEIIFNSSKT--------RAEQEYYRKELEVE   57 (249)
T ss_dssp             EEEEEECCSTTTC-T-TSCS-GGGHHHHHHHH-HTTEEEEEBCSSC--------HHHHHHHHHHHTCC
T ss_pred             ccEEEEeCCCCcc-C-CCCc-HHHHHHHHHHH-HCCCEEEEEeCCC--------HHHHHHHHHHcCCC
Confidence            5789999999998 3 3233 55899999998 5799999999986        35566777778774

>1rlm_A Phosphatase; HAD family, rossman fold, hydrolase; 1.90A {Escherichia coli} SCOP: c.108.1.10 PDB: 1rlt_A 1rlo_A* 2hf2_A

Probab=96.44  E-value=0.0043  Score=56.86  Aligned_cols=43  Identities=9%  Similarity=0.132  Sum_probs=36.4

Q ss_pred             CCCch-hHHHHHHHhCCCCCcEEEEccCCcccHHHHHHcCCeEEEE
Q 017982          257 KKPAG-TAEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGFLTILT  301 (363)
Q Consensus       257 kKP~p-~~~~alk~lgl~pee~vmVGDrL~TDI~~A~raGi~TIlV  301 (363)
                      +++.+ ++..+++++|++++++++|||+. +|+.+++.+|+. +.+
T Consensus       189 ~~~K~~~~~~l~~~l~i~~~~~~~~GD~~-nD~~m~~~ag~~-va~  232 (271)
T 1rlm_A          189 GLHKANGISRLLKRWDLSPQNVVAIGDSG-NDAEMLKMARYS-FAM  232 (271)
T ss_dssp             TCSHHHHHHHHHHHHTCCGGGEEEEECSG-GGHHHHHHCSEE-EEC
T ss_pred             CCChHHHHHHHHHHhCCCHHHEEEECCcH-HHHHHHHHcCCe-EEe
Confidence            44555 57889999999999999999998 899999999984 444

>1nf2_A Phosphatase; structural proteomics, HAD NEW fold, structural genomics, BSGC structure funded by NIH structure initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.108.1.10

Probab=96.37  E-value=0.0064  Score=55.67  Aligned_cols=57  Identities=21%  Similarity=0.141  Sum_probs=46.1

Q ss_pred             CCEEEEcCCceeecCCCCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCe
Q 017982          183 FKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK  250 (363)
Q Consensus       183 IkaVV~DlDnTL~~~~~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~  250 (363)
                      +|.+++|+|+||.. ....+.+...++|++ + +.|+.++|+|...        ...+..+.+.+|++
T Consensus         2 ikli~~DlDGTLl~-~~~~i~~~~~~al~~-~-~~Gi~v~iaTGR~--------~~~~~~~~~~l~~~   58 (268)
T 1nf2_A            2 YRVFVFDLDGTLLN-DNLEISEKDRRNIEK-L-SRKCYVVFASGRM--------LVSTLNVEKKYFKR   58 (268)
T ss_dssp             BCEEEEECCCCCSC-TTSCCCHHHHHHHHH-H-TTTSEEEEECSSC--------HHHHHHHHHHHSSS
T ss_pred             ccEEEEeCCCcCCC-CCCccCHHHHHHHHH-H-hCCCEEEEECCCC--------hHHHHHHHHHhCCC
Confidence            68899999999985 445577889999999 7 6899999999986        35566777777773

>1yv9_A Hydrolase, haloacid dehalogenase family; hypothetical protein, struc genomics, PSI, protein structure initiative; 2.80A {Enterococcus faecalis} SCOP: c.108.1.14

Probab=96.37  E-value=0.0057  Score=55.12  Aligned_cols=62  Identities=15%  Similarity=0.161  Sum_probs=44.9

Q ss_pred             CCCEEEEcCCceeecCCCCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCe
Q 017982          182 GFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK  250 (363)
Q Consensus       182 GIkaVV~DlDnTL~~~~~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~  250 (363)
                      .+++|+||+|+||..  .....+++.++++.++ +.|+.++++||..+..    .....+.+.+.+|++
T Consensus         4 ~~k~v~fDlDGTL~~--~~~~~~~~~~~l~~l~-~~g~~~~~~t~~~~~~----~~~~~~~l~~~~g~~   65 (264)
T 1yv9_A            4 DYQGYLIDLDGTIYL--GKEPIPAGKRFVERLQ-EKDLPFLFVTNNTTKS----PETVAQRLANEFDIH   65 (264)
T ss_dssp             SCCEEEECCBTTTEE--TTEECHHHHHHHHHHH-HTTCCEEEEECCCSSC----HHHHHHHHHHHSCCC
T ss_pred             cCCEEEEeCCCeEEe--CCEECcCHHHHHHHHH-HCCCeEEEEeCCCCCC----HHHHHHHHHHhcCCC
Confidence            489999999999975  3344588999999998 6899999999997522    123333444437764

>2b30_A Pvivax hypothetical protein; SGPP, structural genomics, PSI, protein structure initiative; 2.70A {Plasmodium vivax} SCOP: c.108.1.10

Probab=96.27  E-value=0.0058  Score=57.49  Aligned_cols=58  Identities=12%  Similarity=0.068  Sum_probs=46.0

Q ss_pred             CCCEEEEcCCceeecCCCCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHH--HHhC
Q 017982          182 GFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLE--GKIG  248 (363)
Q Consensus       182 GIkaVV~DlDnTL~~~~~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~--~~LG  248 (363)
                      .+|.+++|+|+||.......+.+.+.++|++|+ +.|+.++|+|..+        ...+..+.  +.++
T Consensus        26 ~ikli~~DlDGTLl~~~~~~is~~~~~al~~l~-~~Gi~v~iaTGR~--------~~~~~~~~~~~~l~   85 (301)
T 2b30_A           26 DIKLLLIDFDGTLFVDKDIKVPSENIDAIKEAI-EKGYMVSICTGRS--------KVGILSAFGEENLK   85 (301)
T ss_dssp             CCCEEEEETBTTTBCCTTTCSCHHHHHHHHHHH-HHTCEEEEECSSC--------HHHHHHHHCHHHHH
T ss_pred             cccEEEEECCCCCcCCCCCccCHHHHHHHHHHH-HCCCEEEEEcCCC--------HHHHHHHhhHHhhc
Confidence            579999999999986314567889999999998 5699999999885        34556666  6665

>3f9r_A Phosphomannomutase; trypanosome glycobiology structural genomics, isomerase, structural genomics consortium, SGC; 1.85A {Trypanosoma brucei} SCOP: c.108.1.0 PDB: 2i54_A* 2i55_A*

Probab=95.84  E-value=0.009  Score=54.78  Aligned_cols=45  Identities=22%  Similarity=0.209  Sum_probs=38.9

Q ss_pred             CCCEEEEcCCceeecCCCCCcchhHHHHHHHHHHhCCCeEEEEeCCC
Q 017982          182 GFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSA  228 (363)
Q Consensus       182 GIkaVV~DlDnTL~~~~~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~  228 (363)
                      .+|.+++|+|+||.. ....+.+...++|++|+ +.|+.++|+|..+
T Consensus         3 ~~kli~~DlDGTLl~-~~~~i~~~~~~~l~~l~-~~g~~~~iaTGR~   47 (246)
T 3f9r_A            3 KRVLLLFDVDGTLTP-PRLCQTDEMRALIKRAR-GAGFCVGTVGGSD   47 (246)
T ss_dssp             CSEEEEECSBTTTBS-TTSCCCHHHHHHHHHHH-HTTCEEEEECSSC
T ss_pred             CceEEEEeCcCCcCC-CCCccCHHHHHHHHHHH-HCCCEEEEECCCC
Confidence            478999999999985 44567799999999998 5799999999886

>1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15

Probab=95.80  E-value=0.0082  Score=54.40  Aligned_cols=59  Identities=19%  Similarity=0.083  Sum_probs=43.4

Q ss_pred             CCEEEEcCCceeecCC----CCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCeEE
Q 017982          183 FKGVVFDKDNTLTAPY----SLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKVI  252 (363)
Q Consensus       183 IkaVV~DlDnTL~~~~----~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~~I  252 (363)
                      |+.+++|+|+||....    ...+.+.+.++|++|+ +.| .++|+|..+        ...+..+...+ ..+|
T Consensus         1 ikli~~DlDGTLl~~~~~~~~~~i~~~~~~al~~l~-~~g-~v~iaTGR~--------~~~~~~~~~~l-~~~I   63 (239)
T 1u02_A            1 MSLIFLDYDGTLVPIIMNPEESYADAGLLSLISDLK-ERF-DTYIVTGRS--------PEEISRFLPLD-INMI   63 (239)
T ss_dssp             -CEEEEECBTTTBCCCSCGGGCCCCHHHHHHHHHHH-HHS-EEEEECSSC--------HHHHHHHSCSS-CEEE
T ss_pred             CeEEEEecCCCCcCCCCCcccCCCCHHHHHHHHHHh-cCC-CEEEEeCCC--------HHHHHHHhccc-hheE
Confidence            5789999999998632    3357789999999998 569 999999885        24455555555 4444

>3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ...

Probab=95.52  E-value=0.043  Score=60.34  Aligned_cols=86  Identities=17%  Similarity=0.157  Sum_probs=62.8

Q ss_pred             CCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCeE----------------------------
Q 017982          200 LTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKV----------------------------  251 (363)
Q Consensus       200 ~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~~----------------------------  251 (363)
                      ..+.|++.+++++|+ +.|++++++|...        ...+..+.+.+|+..                            
T Consensus       602 D~lr~~~~~~I~~l~-~~Gi~v~miTGD~--------~~ta~~ia~~lgi~~~~~~i~~~~~~g~~~~~l~~~~~~~~~~  672 (995)
T 3ar4_A          602 DPPRKEVMGSIQLCR-DAGIRVIMITGDN--------KGTAIAICRRIGIFGENEEVADRAYTGREFDDLPLAEQREACR  672 (995)
T ss_dssp             CCBCTTHHHHHHHHH-HTTCEEEEEESSC--------HHHHHHHHHHHTSSCTTCCCTTTEEEHHHHHTSCHHHHHHHHH
T ss_pred             CCCchhHHHHHHHHH-HcCCEEEEECCCC--------HHHHHHHHHHcCcCCCCCcccceEEEchhhhhCCHHHHHHHHh
Confidence            456789999999998 6899999999875        467788899999841                            


Q ss_pred             ---EEcccCCCchhHHHHHHHhCCCCCcEEEEccCCcccHHHHHHcCCe
Q 017982          252 ---IRHRVKKPAGTAEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGFL  297 (363)
Q Consensus       252 ---I~~~~kKP~p~~~~alk~lgl~pee~vmVGDrL~TDI~~A~raGi~  297 (363)
                         ++.. -.|... ..+++.+.-..+.++||||.. .|+.+-+.|++.
T Consensus       673 ~~~v~~r-~~P~~K-~~~v~~l~~~g~~v~~~GDG~-ND~~alk~Advg  718 (995)
T 3ar4_A          673 RACCFAR-VEPSHK-SKIVEYLQSYDEITAMTGDGV-NDAPALKKAEIG  718 (995)
T ss_dssp             HCCEEES-CCSSHH-HHHHHHHHTTTCCEEEEECSG-GGHHHHHHSTEE
T ss_pred             hCcEEEE-eCHHHH-HHHHHHHHHCCCEEEEEcCCc-hhHHHHHHCCeE
Confidence               2211 134432 223344433357899999999 899999999974

>1rlm_A Phosphatase; HAD family, rossman fold, hydrolase; 1.90A {Escherichia coli} SCOP: c.108.1.10 PDB: 1rlt_A 1rlo_A* 2hf2_A

Probab=95.48  E-value=0.015  Score=53.21  Aligned_cols=45  Identities=24%  Similarity=0.221  Sum_probs=37.1

Q ss_pred             CCCEEEEcCCceeecCCCCCcchh-HHHHHHHHHHhCCCeEEEEeCCC
Q 017982          182 GFKGVVFDKDNTLTAPYSLTLWGP-LSSSIEQCKSVFGHDIAVFSNSA  228 (363)
Q Consensus       182 GIkaVV~DlDnTL~~~~~~~~~p~-v~e~L~~Lk~~~Gikl~IVSN~~  228 (363)
                      .+|.+++|+|+||.. ....+.+. +.++|++|+ +.|+.++|+|..+
T Consensus         2 ~~kli~~DlDGTLl~-~~~~i~~~~~~~al~~l~-~~G~~~~iaTGR~   47 (271)
T 1rlm_A            2 AVKVIVTDMDGTFLN-DAKTYNQPRFMAQYQELK-KRGIKFVVASGNQ   47 (271)
T ss_dssp             CCCEEEECCCCCCSC-TTSCCCHHHHHHHHHHHH-HHTCEEEEECSSC
T ss_pred             CccEEEEeCCCCCCC-CCCcCCHHHHHHHHHHHH-HCCCEEEEEeCCc
Confidence            478999999999986 34456677 489999998 5799999999985

>4fe3_A Cytosolic 5'-nucleotidase 3; substrate complex, HAD-like, protein binding; HET: U5P; 1.74A {Mus musculus} PDB: 2g09_A* 2bdu_A* 2g08_A 2g06_A* 2g0a_A* 2q4t_A* 2g07_A* 2jga_A 2vkq_A 2cn1_A

Probab=95.45  E-value=0.014  Score=54.32  Aligned_cols=87  Identities=14%  Similarity=0.146  Sum_probs=59.6

Q ss_pred             CCCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCeE----EE------------cc------
Q 017982          198 YSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKV----IR------------HR------  255 (363)
Q Consensus       198 ~~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~~----I~------------~~------  255 (363)
                      ....+.|++.++++.|+ ..|++++|+|...        ...++.+++.+|+..    +.            ..      
T Consensus       138 ~~i~l~~g~~e~i~~l~-~~gi~v~ivSgg~--------~~~i~~i~~~~g~~~~~~~i~~n~l~~~~~~~~~~~~~~~i  208 (297)
T 4fe3_A          138 SDVMLKEGYENFFGKLQ-QHGIPVFIFSAGI--------GDVLEEVIRQAGVYHSNVKVVSNFMDFDENGVLKGFKGELI  208 (297)
T ss_dssp             SCCCBCBTHHHHHHHHH-HTTCCEEEEEEEE--------HHHHHHHHHHTTCCCTTEEEEEECEEECTTSBEEEECSSCC
T ss_pred             cCCCCCCcHHHHHHHHH-HcCCeEEEEeCCc--------HHHHHHHHHHcCCCcccceEEeeeEEEcccceeEecccccc
Confidence            34567899999999998 6899999999764        467889999998752    21            01      


Q ss_pred             --cCCCchhH-HHHHHHhCCCCCcEEEEccCCcccHHHHHHc
Q 017982          256 --VKKPAGTA-EEIEKHFGCQSSQLIMVGDRPFTDIVYGNRN  294 (363)
Q Consensus       256 --~kKP~p~~-~~alk~lgl~pee~vmVGDrL~TDI~~A~ra  294 (363)
                        ..|+.+.. ......+.-..++++||||.. +|+.+++.+
T Consensus       209 ~~~~k~~~~~k~~~~~~~~~~~~~v~~vGDGi-NDa~m~k~l  249 (297)
T 4fe3_A          209 HVFNKHDGALKNTDYFSQLKDNSNIILLGDSQ-GDLRMADGV  249 (297)
T ss_dssp             CTTCHHHHHHTCHHHHHHTTTCCEEEEEESSG-GGGGTTTTC
T ss_pred             chhhcccHHHHHHHHHHhhccCCEEEEEeCcH-HHHHHHhCc
Confidence              11222211 112233444667899999999 899987743

>1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1

Probab=95.44  E-value=0.043  Score=60.20  Aligned_cols=108  Identities=19%  Similarity=0.231  Sum_probs=75.7

Q ss_pred             HHHHHcCCCEEEEcCCc-----eeec--CCCCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhC
Q 017982          176 AELQRRGFKGVVFDKDN-----TLTA--PYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIG  248 (363)
Q Consensus       176 ~~L~~~GIkaVV~DlDn-----TL~~--~~~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LG  248 (363)
                      +.+.+.|.+++.+-.+.     ++..  .-...+-|++.+++++|+ +.|+++.++|.-.        ...+..+.+.+|
T Consensus       503 ~~~a~~G~RvL~vA~~~~e~~l~~lGli~i~Dp~R~ea~~aI~~l~-~aGI~v~MiTGD~--------~~TA~aIA~~lG  573 (920)
T 1mhs_A          503 AEFATRGFRSLGVARKRGEGSWEILGIMPCMDPPRHDTYKTVCEAK-TLGLSIKMLTGDA--------VGIARETSRQLG  573 (920)
T ss_dssp             HHHHTSSCCCCEECCCSSSCSCCCCBBCCCCCCCCHHHHHHHHHHH-HHTCEEEEEESSC--------HHHHHHHHHHHT
T ss_pred             HHHHhCCCEEEEEEEeccccccEEEEEEEEeccccccHHHHHHHHh-hcCceEEEEcCCC--------HHHHHHHHHHcC
Confidence            45567888887765432     3332  134567899999999998 6899999999774        367889999999


Q ss_pred             CeE-----------------------------EEcccCCCchh--HHHHHHHhCCCCCcEEEEccCCcccHHHHHHcCCe
Q 017982          249 IKV-----------------------------IRHRVKKPAGT--AEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGFL  297 (363)
Q Consensus       249 i~~-----------------------------I~~~~kKP~p~--~~~alk~lgl~pee~vmVGDrL~TDI~~A~raGi~  297 (363)
                      +..                             ++.. -.|...  +-+.+++.|   +.++|+||.. +|..+=+.+++.
T Consensus       574 I~~~~~~~~~~~~~g~~~~~~~el~~~~~~~~V~ar-v~P~~K~~iV~~Lq~~g---~~Vam~GDGv-NDapaLk~AdvG  648 (920)
T 1mhs_A          574 LGTNIYNAERLGLGGGGDMPGSEVYDFVEAADGFAE-VFPQHKYNVVEILQQRG---YLVAMTGDGV-NDAPSLKKADTG  648 (920)
T ss_dssp             SSCSCCCSSSSSSCBCCCGGGGGGGTTTTTTSCEES-CCSTHHHHHHHHHHTTT---CCCEECCCCG-GGHHHHHHSSEE
T ss_pred             CCccccCccceeecCcccCCHHHHHHHHhhCeEEEE-eCHHHHHHHHHHHHhCC---CeEEEEcCCc-ccHHHHHhCCcC
Confidence            851                             2222 245432  223344333   7899999999 899999988864

>1nrw_A Hypothetical protein, haloacid dehalogenase-like hydrolase; structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: c.108.1.10

Probab=95.38  E-value=0.0098  Score=54.90  Aligned_cols=39  Identities=15%  Similarity=0.162  Sum_probs=34.9

Q ss_pred             hHHHHHHHhCCCCCcEEEEccCCcccHHHHHHcCCeEEEEc
Q 017982          262 TAEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGFLTILTE  302 (363)
Q Consensus       262 ~~~~alk~lgl~pee~vmVGDrL~TDI~~A~raGi~TIlV~  302 (363)
                      ++..+++.+|++++++++|||+. +|+.+++.+|+ ++.|.
T Consensus       220 ~~~~~~~~~~~~~~~~~~~GD~~-nD~~m~~~ag~-~va~~  258 (288)
T 1nrw_A          220 ALKRLAKQLNIPLEETAAVGDSL-NDKSMLEAAGK-GVAMG  258 (288)
T ss_dssp             HHHHHHHHTTCCGGGEEEEESSG-GGHHHHHHSSE-EEECT
T ss_pred             HHHHHHHHhCCCHHHEEEEcCCH-HHHHHHHHcCc-EEEEc
Confidence            46889999999999999999998 89999999998 66663

>3ef0_A RNA polymerase II subunit A C-terminal domain phosphatase; CTD, FCPH, BRCT, hydrolase, ALF4, transition state analog, cobalt, magnesium; 2.10A {Schizosaccharomyces pombe}

Probab=95.35  E-value=0.0086  Score=59.32  Aligned_cols=113  Identities=15%  Similarity=0.214  Sum_probs=77.2

Q ss_pred             HHHHHcCCCEEEEcCCceeecCC-------------C--------------------------CCcchhHHHHHHHHHHh
Q 017982          176 AELQRRGFKGVVFDKDNTLTAPY-------------S--------------------------LTLWGPLSSSIEQCKSV  216 (363)
Q Consensus       176 ~~L~~~GIkaVV~DlDnTL~~~~-------------~--------------------------~~~~p~v~e~L~~Lk~~  216 (363)
                      +.|...+.+++|+|+|+||....             .                          ....|++.++|+++.  
T Consensus        11 ~rl~~~~k~~LVlDLD~TLvhS~~~~~~~~w~~~~~~~~~~~~~dv~~f~~~~~~~~~~~~~~v~~RPg~~eFL~~l~--   88 (372)
T 3ef0_A           11 KRLRQEKRLSLIVDLDQTIIHATVDPTVGEWMSDPGNVNYDVLRDVRSFNLQEGPSGYTSCYYIKFRPGLAQFLQKIS--   88 (372)
T ss_dssp             HHHHHHTCEEEEECCBTTTEEEECCTHHHHHHTCTTSTTTGGGTTCEEEEEEETTTTEEEEEEEEECTTHHHHHHHHH--
T ss_pred             HHHHhCCCCEEEEcCCCCcccccCcCccchhhccCCCCchhhhhhhhceeeeeccCCceEEEEEEECcCHHHHHHHHh--
Confidence            56778899999999999997420             0                          012689999999997  


Q ss_pred             CCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCeE------EEcccCCCchhHHHHHHHh-CCCCCcEEEEccCCcccHH
Q 017982          217 FGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKV------IRHRVKKPAGTAEEIEKHF-GCQSSQLIMVGDRPFTDIV  289 (363)
Q Consensus       217 ~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~~------I~~~~kKP~p~~~~alk~l-gl~pee~vmVGDrL~TDI~  289 (363)
                      .+|.++|.|++.        ...+..+++.++...      ++....-+. .+.+.++.+ |.+++++++|.|+.  +..
T Consensus        89 ~~yeivI~Tas~--------~~yA~~vl~~LDp~~~~f~~ri~sr~~~g~-~~~KdL~~L~~~dl~~viiiDd~~--~~~  157 (372)
T 3ef0_A           89 ELYELHIYTMGT--------KAYAKEVAKIIDPTGKLFQDRVLSRDDSGS-LAQKSLRRLFPCDTSMVVVIDDRG--DVW  157 (372)
T ss_dssp             TTEEEEEECSSC--------HHHHHHHHHHHCTTSCSSSSCEECTTTSSC-SSCCCGGGTCSSCCTTEEEEESCS--GGG
T ss_pred             cCcEEEEEeCCc--------HHHHHHHHHHhccCCceeeeEEEEecCCCC-cceecHHHhcCCCCceEEEEeCCH--HHc
Confidence            378999999996        467888888887542      211100011 123445554 89999999999987  455


Q ss_pred             HHHHcCCeEEEEcCC
Q 017982          290 YGNRNGFLTILTEPL  304 (363)
Q Consensus       290 ~A~raGi~TIlV~p~  304 (363)
                      ..+  . ..|.|.|.
T Consensus       158 ~~~--p-N~I~i~~~  169 (372)
T 3ef0_A          158 DWN--P-NLIKVVPY  169 (372)
T ss_dssp             TTC--T-TEEECCCC
T ss_pred             CCC--C-cEeeeCCc
Confidence            444  2 55666544

>2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A

Probab=95.18  E-value=0.08  Score=58.52  Aligned_cols=84  Identities=13%  Similarity=0.197  Sum_probs=61.6

Q ss_pred             CCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCe-----------------------------
Q 017982          200 LTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK-----------------------------  250 (363)
Q Consensus       200 ~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~-----------------------------  250 (363)
                      ..+.|++.+++++|+ +.|++++++|...        ...+..+.+.+|+.                             
T Consensus       598 Dplr~~~~~aI~~l~-~aGI~v~miTGD~--------~~tA~~ia~~lgi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~  668 (1028)
T 2zxe_A          598 DPPRAAVPDAVGKCR-SAGIKVIMVTGDH--------PITAKAIAKGVGIISEGNETIEDIAARLNIPIGQVNPRDAKAC  668 (1028)
T ss_dssp             CCBCTTHHHHHHHHH-HTTCEEEEECSSC--------HHHHHHHHHHHTSSCTTCCCHHHHHHHTTCCGGGSCGGGCCEE
T ss_pred             CCCChhHHHHHHHHH-HcCCEEEEECCCC--------HHHHHHHHHHcCCCCCCchhHHHHHhhcCcchhhccccccceE
Confidence            356799999999998 6899999999875        36677888888875                             


Q ss_pred             ------------------------EEEcccCCCchh--HHHHHHHhCCCCCcEEEEccCCcccHHHHHHcCCe
Q 017982          251 ------------------------VIRHRVKKPAGT--AEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGFL  297 (363)
Q Consensus       251 ------------------------~I~~~~kKP~p~--~~~alk~lgl~pee~vmVGDrL~TDI~~A~raGi~  297 (363)
                                              .++. .-.|...  +-+.+++.|   +.++||||.. .|+.+-+.+++.
T Consensus       669 vi~G~~l~~~~~~~l~~~~~~~~~~v~a-r~~P~~K~~iV~~lq~~g---~~V~~iGDG~-ND~paLk~AdvG  736 (1028)
T 2zxe_A          669 VVHGSDLKDLSTEVLDDILHYHTEIVFA-RTSPQQKLIIVEGCQRQG---AIVAVTGDGV-NDSPALKKADIG  736 (1028)
T ss_dssp             EEEHHHHTTCCHHHHHHHHHHCSEEEEE-SCCHHHHHHHHHHHHHTT---CCEEEEECSG-GGHHHHHHSSEE
T ss_pred             EEEcHHhhhCCHHHHHHHHhhCCcEEEE-EcCHHHHHHHHHHHHhCC---CEEEEEcCCc-chHHHHHhCCce
Confidence                                    1221 2244432  234445544   6899999999 899999999864

>2amy_A PMM 2, phosphomannomutase 2; HS.459855, HS.313504, BC008310, phosphatase, PFAM PF03332, H superfamily, jaecken disease; 2.09A {Homo sapiens} SCOP: c.108.1.10 PDB: 2q4r_A

Probab=95.12  E-value=0.028  Score=50.53  Aligned_cols=46  Identities=24%  Similarity=0.220  Sum_probs=38.0

Q ss_pred             HcCCCEEEEcCCceeecCCCCCcchhHHHHHHHHHHhCCCeEEEEeCCC
Q 017982          180 RRGFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSA  228 (363)
Q Consensus       180 ~~GIkaVV~DlDnTL~~~~~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~  228 (363)
                      ...+|.+++|+|+||.. ....+.+...++|++|+ +. +.++|+|..+
T Consensus         3 ~~~~kli~~DlDGTLl~-~~~~i~~~~~~al~~l~-~~-i~v~iaTGR~   48 (246)
T 2amy_A            3 APGPALCLFDVDGTLTA-PRQKITKEMDDFLQKLR-QK-IKIGVVGGSD   48 (246)
T ss_dssp             -CCSEEEEEESBTTTBC-TTSCCCHHHHHHHHHHT-TT-SEEEEECSSC
T ss_pred             CCCceEEEEECCCCcCC-CCcccCHHHHHHHHHHH-hC-CeEEEEcCCC
Confidence            35789999999999986 34457899999999998 46 8999999885

>3shq_A UBLCP1; phosphatase, hydrolase; 1.96A {Drosophila melanogaster}

Probab=95.04  E-value=0.039  Score=53.50  Aligned_cols=129  Identities=16%  Similarity=0.140  Sum_probs=83.9

Q ss_pred             cCCCEEEEcCCceeecCCCC------CcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCe----
Q 017982          181 RGFKGVVFDKDNTLTAPYSL------TLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK----  250 (363)
Q Consensus       181 ~GIkaVV~DlDnTL~~~~~~------~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~----  250 (363)
                      .|-+.+|+|+|+||......      ..-|++.++|+++.+  +|.++|.|.+.        ...+..+++.++..    
T Consensus       138 ~~k~tLVLDLDeTLvh~~~~~~~~~~~~RP~l~eFL~~l~~--~yeivIfTas~--------~~ya~~vld~Ld~~~~~~  207 (320)
T 3shq_A          138 EGKKLLVLDIDYTLFDHRSPAETGTELMRPYLHEFLTSAYE--DYDIVIWSATS--------MRWIEEKMRLLGVASNDN  207 (320)
T ss_dssp             TTCEEEEECCBTTTBCSSSCCSSHHHHBCTTHHHHHHHHHH--HEEEEEECSSC--------HHHHHHHHHHTTCTTCSS
T ss_pred             CCCcEEEEeccccEEcccccCCCcceEeCCCHHHHHHHHHh--CCEEEEEcCCc--------HHHHHHHHHHhCCCCCcc
Confidence            47889999999999863221      257999999999984  57999999996        46788888877642    


Q ss_pred             ----EEEccc------CCCch-hHHHHHHHh-----CCCCCcEEEEccCCcccHHHHHHcCCeEEEEcCCCC-----CCc
Q 017982          251 ----VIRHRV------KKPAG-TAEEIEKHF-----GCQSSQLIMVGDRPFTDIVYGNRNGFLTILTEPLSL-----AEE  309 (363)
Q Consensus       251 ----~I~~~~------kKP~p-~~~~alk~l-----gl~pee~vmVGDrL~TDI~~A~raGi~TIlV~p~~~-----~~e  309 (363)
                          ++...+      .+... .+.+-|+.+     |.+++++++|.|+.. =....-.+   .|.|.+...     ..+
T Consensus       208 ~~~~~~r~~~~~~~~~~~~~g~~~vKdLs~Lw~~~p~rdl~~tIiIDdsp~-~~~~~p~N---gI~I~~~~~~~~~~~~D  283 (320)
T 3shq_A          208 YKVMFYLDSTAMISVHVPERGVVDVKPLGVIWALYKQYNSSNTIMFDDIRR-NFLMNPKS---GLKIRPFRQAHLNRGTD  283 (320)
T ss_dssp             CCCCEEECGGGCEEEEETTTEEEEECCHHHHHHHCTTCCGGGEEEEESCGG-GGTTSGGG---EEECCCCCCHHHHTTTC
T ss_pred             eeEEEEEcCCccccccccCCCCEEEEEhHHhhcccCCCChhHEEEEeCChH-HhccCcCc---eEEeCeEcCCCCCCCcc
Confidence                222111      12222 233455566     889999999999883 23333334   456665532     223


Q ss_pred             hhHHHHHHHHHHHH
Q 017982          310 PFIVRQVRKLEVTI  323 (363)
Q Consensus       310 ~~~t~~~R~lE~~v  323 (363)
                      .-...+...||...
T Consensus       284 ~eL~~L~~~L~~L~  297 (320)
T 3shq_A          284 TELLKLSDYLRKIA  297 (320)
T ss_dssp             CHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHh
Confidence            33445677777533

>1rkq_A Hypothetical protein YIDA; two domain structure with beta-alpha sandwich. stucture contains A magnesium ION., PSI, protein structure initiative; 1.40A {Escherichia coli} SCOP: c.108.1.10

Probab=94.69  E-value=0.02  Score=52.77  Aligned_cols=38  Identities=16%  Similarity=0.386  Sum_probs=33.7

Q ss_pred             hHHHHHHHhCCCCCcEEEEccCCcccHHHHHHcCCeEEEE
Q 017982          262 TAEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGFLTILT  301 (363)
Q Consensus       262 ~~~~alk~lgl~pee~vmVGDrL~TDI~~A~raGi~TIlV  301 (363)
                      .+..+++.+|++++++++|||+. +|+.+++.+|+ ++.+
T Consensus       202 ~l~~l~~~~~~~~~~~~~~GD~~-nD~~m~~~ag~-~va~  239 (282)
T 1rkq_A          202 GVKSLADVLGIKPEEIMAIGDQE-NDIAMIEYAGV-GVAV  239 (282)
T ss_dssp             HHHHHHHHHTCCGGGEEEEECSG-GGHHHHHHSSE-EEEC
T ss_pred             HHHHHHHHhCCCHHHEEEECCcH-HHHHHHHHCCc-EEEe
Confidence            46888999999999999999998 89999999997 4555

>1nf2_A Phosphatase; structural proteomics, HAD NEW fold, structural genomics, BSGC structure funded by NIH structure initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.108.1.10

Probab=94.65  E-value=0.012  Score=53.95  Aligned_cols=35  Identities=11%  Similarity=0.327  Sum_probs=32.2

Q ss_pred             hHHHHHHHhCCCCCcEEEEccCCcccHHHHHHcCCe
Q 017982          262 TAEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGFL  297 (363)
Q Consensus       262 ~~~~alk~lgl~pee~vmVGDrL~TDI~~A~raGi~  297 (363)
                      ++..+++++|++++++++|||+. +|+.+++.+|+.
T Consensus       194 ~~~~~~~~~~~~~~~~~~~GD~~-nD~~~~~~ag~~  228 (268)
T 1nf2_A          194 ALRFLRERMNWKKEEIVVFGDNE-NDLFMFEEAGLR  228 (268)
T ss_dssp             HHHHHHHHHTCCGGGEEEEECSH-HHHHHHTTCSEE
T ss_pred             HHHHHHHHcCCCHHHeEEEcCch-hhHHHHHHcCCE
Confidence            46889999999999999999998 899999999983

>2b30_A Pvivax hypothetical protein; SGPP, structural genomics, PSI, protein structure initiative; 2.70A {Plasmodium vivax} SCOP: c.108.1.10

Probab=94.30  E-value=0.096  Score=49.07  Aligned_cols=38  Identities=21%  Similarity=0.339  Sum_probs=33.5

Q ss_pred             hHHHHHHHhCCCCCcEEEEccCCcccHHHHHHcCCeEEEE
Q 017982          262 TAEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGFLTILT  301 (363)
Q Consensus       262 ~~~~alk~lgl~pee~vmVGDrL~TDI~~A~raGi~TIlV  301 (363)
                      ++..+++.+|++++++++|||+. +|+.+++.+|+. +.+
T Consensus       228 ~l~~l~~~~~~~~~~~~~~GD~~-nD~~m~~~ag~~-va~  265 (301)
T 2b30_A          228 GINYLLKHYNISNDQVLVVGDAE-NDIAMLSNFKYS-FAV  265 (301)
T ss_dssp             HHHHHHHHTTCCGGGEEEEECSG-GGHHHHHSCSEE-EEC
T ss_pred             HHHHHHHHcCCCHHHEEEECCCH-HHHHHHHHcCCe-EEE
Confidence            46888999999999999999998 899999999984 444

>2fue_A PMM 1, PMMH-22, phosphomannomutase 1; enzyme-product complex, protein glycosyl carbohydrate-deficient glycoprotein syndrome; HET: MSE M1P; 1.75A {Homo sapiens} SCOP: c.108.1.10 PDB: 2fuc_A*

Probab=94.14  E-value=0.039  Score=50.41  Aligned_cols=45  Identities=20%  Similarity=0.181  Sum_probs=36.6

Q ss_pred             cCCCEEEEcCCceeecCCCCCcchhHHHHHHHHHHhCCCeEEEEeCCC
Q 017982          181 RGFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSA  228 (363)
Q Consensus       181 ~GIkaVV~DlDnTL~~~~~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~  228 (363)
                      ..++.+++|+|+||.. ....+.+...++|++|+ +. +.++|+|..+
T Consensus        11 ~~~kli~~DlDGTLl~-~~~~is~~~~~al~~l~-~~-i~v~iaTGR~   55 (262)
T 2fue_A           11 KERVLCLFDVDGTLTP-ARQKIDPEVAAFLQKLR-SR-VQIGVVGGSD   55 (262)
T ss_dssp             --CEEEEEESBTTTBS-TTSCCCHHHHHHHHHHT-TT-SEEEEECSSC
T ss_pred             cCeEEEEEeCccCCCC-CCCcCCHHHHHHHHHHH-hC-CEEEEEcCCC
Confidence            4689999999999986 44457899999999997 56 8999999774

>1s2o_A SPP, sucrose-phosphatase; phosphohydrolase, HAD superfamily, cyanobacteria; 1.40A {Synechocystis SP} SCOP: c.108.1.10 PDB: 1tj3_A 1tj4_A* 1tj5_A* 1u2s_A* 1u2t_A* 2b1q_A* 2b1r_A* 2d2v_A*

Probab=93.92  E-value=0.03  Score=50.71  Aligned_cols=43  Identities=19%  Similarity=0.303  Sum_probs=35.3

Q ss_pred             cCCCchhHHHHHHHhCCCCCcEEEEccCCcccHHHHHHcCCeEEEE
Q 017982          256 VKKPAGTAEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGFLTILT  301 (363)
Q Consensus       256 ~kKP~p~~~~alk~lgl~pee~vmVGDrL~TDI~~A~raGi~TIlV  301 (363)
                      +.|+. .+..+++++|++++++++|||+. +|+.+++.+|+ ++.+
T Consensus       161 ~~K~~-~l~~l~~~~~~~~~~~~~~GD~~-nD~~m~~~~g~-~va~  203 (244)
T 1s2o_A          161 SNKGN-ATQYLQQHLAMEPSQTLVCGDSG-NDIGLFETSAR-GVIV  203 (244)
T ss_dssp             CSHHH-HHHHHHHHTTCCGGGEEEEECSG-GGHHHHTSSSE-EEEC
T ss_pred             CChHH-HHHHHHHHhCCCHHHEEEECCch-hhHHHHhccCc-EEEE
Confidence            33433 46889999999999999999998 89999998886 4555

>3gyg_A NTD biosynthesis operon putative hydrolase NTDB; PF05116, PF08282, MCSG, PSI-2, haloacid dehalogenase-like HY structural genomics; 2.45A {Bacillus subtilis subsp}

Probab=93.49  E-value=0.11  Score=47.53  Aligned_cols=58  Identities=14%  Similarity=-0.082  Sum_probs=40.8

Q ss_pred             CCCEEEEcCCceeecCCCCCcchhHHHHHHH-------HHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCe
Q 017982          182 GFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQ-------CKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK  250 (363)
Q Consensus       182 GIkaVV~DlDnTL~~~~~~~~~p~v~e~L~~-------Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~  250 (363)
                      .+++|+||+|+||....   ..+.....+..       +....|+.++++|..+        ...+..++..+|++
T Consensus        21 ~~kliifDlDGTLlds~---i~~~~~~~l~~~~~~l~~~~~~~g~~~~~~tGr~--------~~~~~~~~~~~g~~   85 (289)
T 3gyg_A           21 PQYIVFCDFDETYFPHT---IDEQKQQDIYELEDYLEQKSKDGELIIGWVTGSS--------IESILDKMGRGKFR   85 (289)
T ss_dssp             CSEEEEEETBTTTBCSS---CCHHHHHHHHHHHHHHHHHHHTTCEEEEEECSSC--------HHHHHHHHHHTTCC
T ss_pred             CCeEEEEECCCCCcCCC---CCcchHHHHHHHHHHHHHHHhcCCcEEEEEcCCC--------HHHHHHHHHhhccC
Confidence            47899999999998532   55666666652       3235788999998774        35566777777774

>3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana}

Probab=93.48  E-value=0.079  Score=57.85  Aligned_cols=108  Identities=10%  Similarity=0.103  Sum_probs=72.7

Q ss_pred             HHHHHcCCCEEEEcCC-------------ceeec--CCCCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHH
Q 017982          176 AELQRRGFKGVVFDKD-------------NTLTA--PYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKA  240 (363)
Q Consensus       176 ~~L~~~GIkaVV~DlD-------------nTL~~--~~~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a  240 (363)
                      +.+.+.|.+++.+-.+             .++..  .-...+-|++.+++++|+ +.|+++.++|.-.        ...+
T Consensus       448 ~~~a~~G~rvl~vA~~~~~~~~~~~~e~~l~~lGli~i~Dp~R~~a~~aI~~l~-~aGI~v~MiTGD~--------~~tA  518 (885)
T 3b8c_A          448 DKYAERGLRSLAVARQVVPEKTKESPGAPWEFVGLLPLFDPPRHDSAETIRRAL-NLGVNVKMITGDQ--------LAIG  518 (885)
T ss_dssp             HHHTTTTCEEEEECCBCCCSSSSSCCCCCCCCCEEEEECCCCCHHHHHHHHHHH-HTTCCCEEEESSC--------HHHH
T ss_pred             HHHHhCCCeEEEEEEeccccccccccccCcEEEEEEEeecccchhHHHHHHHHH-HcCCcEEEEcCCC--------hHHH
Confidence            3455688888877543             12211  123457899999999998 6899999999764        3667


Q ss_pred             HHHHHHhCCeE------------------------------EEcccCCCchh--HHHHHHHhCCCCCcEEEEccCCcccH
Q 017982          241 RKLEGKIGIKV------------------------------IRHRVKKPAGT--AEEIEKHFGCQSSQLIMVGDRPFTDI  288 (363)
Q Consensus       241 ~~i~~~LGi~~------------------------------I~~~~kKP~p~--~~~alk~lgl~pee~vmVGDrL~TDI  288 (363)
                      ..+.+.+|+..                              ++. .-.|...  +-+.++..|   +.++|+||.. +|.
T Consensus       519 ~~iA~~lGi~~~~~~~~~l~g~~~~~~~~~~~l~~~~~~~~v~a-rv~P~~K~~iV~~lq~~g---~~Vam~GDGv-NDa  593 (885)
T 3b8c_A          519 KETGRRLGMGTNMYPSSALLGTHKDANLASIPVEELIEKADGFA-GVFPEHKYEIVKKLQERK---HIVGMTGDGV-NDA  593 (885)
T ss_dssp             THHHHTTTCTTCCSTTSSCCBGGGGTTSCCSCHHHHHHTSCCEE-CCCHHHHHHHHHHHHHTT---CCCCBCCCSS-TTH
T ss_pred             HHHHHHhCCccccCCcceeeccccccccchhHHHHHHhhCcEEE-EECHHHHHHHHHHHHHCC---CeEEEEcCCc-hhH
Confidence            78888888731                              111 1234432  233444444   6899999999 899


Q ss_pred             HHHHHcCCe
Q 017982          289 VYGNRNGFL  297 (363)
Q Consensus       289 ~~A~raGi~  297 (363)
                      .+=+.+++.
T Consensus       594 paLk~AdvG  602 (885)
T 3b8c_A          594 PALKKADIG  602 (885)
T ss_dssp             HHHHHSSSC
T ss_pred             HHHHhCCEe
Confidence            998888763

>4gxt_A A conserved functionally unknown protein; structural genomics, PSI-biology; 1.82A {Anaerococcus prevotii}

Probab=92.81  E-value=0.039  Score=54.53  Aligned_cols=96  Identities=13%  Similarity=0.152  Sum_probs=62.4

Q ss_pred             CCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCe-------EEE-----c-------ccCC--
Q 017982          200 LTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK-------VIR-----H-------RVKK--  258 (363)
Q Consensus       200 ~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~-------~I~-----~-------~~kK--  258 (363)
                      ..++|++.+.++.|+ +.|++++|||.+.        ...++.+++.+|+.       ++.     .       ....  
T Consensus       220 ir~~p~~~eLi~~L~-~~G~~v~IVSgg~--------~~~v~~ia~~lg~~y~ip~~~Vig~~l~~~~dG~~tg~~~~~~  290 (385)
T 4gxt_A          220 IRTLDEMVDLYRSLE-ENGIDCYIVSASF--------IDIVRAFATDTNNNYKMKEEKVLGLRLMKDDEGKILPKFDKDF  290 (385)
T ss_dssp             CEECHHHHHHHHHHH-HTTCEEEEEEEEE--------HHHHHHHHHCTTSSCCCCGGGEEEECEEECTTCCEEEEECTTS
T ss_pred             ceeCHHHHHHHHHHH-HCCCeEEEEcCCc--------HHHHHHHHHHhCcccCCCcceEEEeEEEEecCCceeeeecCcc
Confidence            347999999999998 6899999999985        47788898887642       221     0       0111  


Q ss_pred             Cch-h-H-HHHHHHh---CCCCCcEEEEccCCcccHHHHHHcC-C-eEEEEcCCC
Q 017982          259 PAG-T-A-EEIEKHF---GCQSSQLIMVGDRPFTDIVYGNRNG-F-LTILTEPLS  305 (363)
Q Consensus       259 P~p-~-~-~~alk~l---gl~pee~vmVGDrL~TDI~~A~raG-i-~TIlV~p~~  305 (363)
                      |-. . - -.+++.+   ......++++||+. +|+.+-...+ . ..+.+++..
T Consensus       291 p~~~~~gK~~~i~~~~~~~~~~~~i~a~GDs~-~D~~ML~~~~~~~~~liinr~~  344 (385)
T 4gxt_A          291 PISIREGKVQTINKLIKNDRNYGPIMVGGDSD-GDFAMLKEFDHTDLSLIIHRAN  344 (385)
T ss_dssp             CCCSTHHHHHHHHHHTCCTTEECCSEEEECSG-GGHHHHHHCTTCSEEEEECCSC
T ss_pred             ceeCCCchHHHHHHHHHhcCCCCcEEEEECCH-hHHHHHhcCccCceEEEEcCCc
Confidence            211 0 1 1233332   24456799999998 8999987643 2 245566543

>1y8a_A Hypothetical protein AF1437; structural genomics, protein structu initiative, PSI, midwest center for structural genomics; 1.40A {Archaeoglobus fulgidus} SCOP: c.108.1.24

Probab=92.39  E-value=0.14  Score=48.32  Aligned_cols=30  Identities=27%  Similarity=0.305  Sum_probs=25.6

Q ss_pred             CCCCCc----EEEEccCCcccHHHHHHc----CCeEEEEc
Q 017982          271 GCQSSQ----LIMVGDRPFTDIVYGNRN----GFLTILTE  302 (363)
Q Consensus       271 gl~pee----~vmVGDrL~TDI~~A~ra----Gi~TIlV~  302 (363)
                      |+++++    +++|||+. +|+.+++.+    |+. |.|+
T Consensus       214 gi~~~~~~~~via~GDs~-NDi~ml~~A~~~~g~~-vamn  251 (332)
T 1y8a_A          214 GYCESKGIDFPVVVGDSI-SDYKMFEAARGLGGVA-IAFN  251 (332)
T ss_dssp             HHHHHHTCSSCEEEECSG-GGHHHHHHHHHTTCEE-EEES
T ss_pred             ccChhhcCceEEEEeCcH-hHHHHHHHHhhcCCeE-EEec
Confidence            678889    99999998 899999999    986 4443

>3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2yn9_A 2xzb_A 1iwc_A 1iwf_A

Probab=90.68  E-value=0.72  Score=50.95  Aligned_cols=42  Identities=12%  Similarity=0.308  Sum_probs=33.0

Q ss_pred             CCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCC
Q 017982          199 SLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGI  249 (363)
Q Consensus       199 ~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi  249 (363)
                      ...+.|++.+++++|+ +.|++++++|...        ...+..+.+.+|+
T Consensus       602 ~Dp~r~~~~~aI~~l~-~aGI~vvmiTGd~--------~~tA~~ia~~lgi  643 (1034)
T 3ixz_A          602 IDPPRATVPDAVLKCR-TAGIRVIMVTGDH--------PITAKAIAASVGI  643 (1034)
T ss_pred             cCCCchhHHHHHHHHH-HcCCeEEEEeCCC--------HHHHHHHHHHcCC
Confidence            3457889999999998 6899999999875        2456667777666

>2zos_A MPGP, mannosyl-3-phosphoglycerate phosphatase; haloacid dehalogenase like hydrolase, mannosylglycerate, cytoplasm, hydrolase, magnesium; 1.70A {Pyrococcus horikoshii} PDB: 1wzc_A

Probab=89.95  E-value=0.19  Score=45.41  Aligned_cols=39  Identities=13%  Similarity=0.071  Sum_probs=33.9

Q ss_pred             hHHHHHHHhCC-CCCcEEEEccCCcccHHHHHHcCCeEEEEc
Q 017982          262 TAEEIEKHFGC-QSSQLIMVGDRPFTDIVYGNRNGFLTILTE  302 (363)
Q Consensus       262 ~~~~alk~lgl-~pee~vmVGDrL~TDI~~A~raGi~TIlV~  302 (363)
                      +++.+++.+|+ +++++++|||+. +|+.+.+.+|+. |.+.
T Consensus       183 al~~l~~~~~~~~~~~viafGD~~-NDi~Ml~~ag~~-va~g  222 (249)
T 2zos_A          183 AAKILLDFYKRLGQIESYAVGDSY-NDFPMFEVVDKV-FIVG  222 (249)
T ss_dssp             HHHHHHHHHHTTSCEEEEEEECSG-GGHHHHTTSSEE-EEES
T ss_pred             HHHHHHHHhccCCCceEEEECCCc-ccHHHHHhCCcE-EEeC
Confidence            46888999998 999999999998 899999999974 6664

>1s2o_A SPP, sucrose-phosphatase; phosphohydrolase, HAD superfamily, cyanobacteria; 1.40A {Synechocystis SP} SCOP: c.108.1.10 PDB: 1tj3_A 1tj4_A* 1tj5_A* 1u2s_A* 1u2t_A* 2b1q_A* 2b1r_A* 2d2v_A*

Probab=89.43  E-value=0.18  Score=45.43  Aligned_cols=53  Identities=19%  Similarity=0.205  Sum_probs=38.4

Q ss_pred             EEEEcCCceeecCCCCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCC
Q 017982          185 GVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGI  249 (363)
Q Consensus       185 aVV~DlDnTL~~~~~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi  249 (363)
                      .+++|+|+||....  ...+.+.++|++++  .|+.++|+|..+        ...+..+.+.+++
T Consensus         5 li~~DlDGTLl~~~--~~~~~~~~~l~~~~--~gi~v~iaTGR~--------~~~~~~~~~~l~l   57 (244)
T 1s2o_A            5 LLISDLDNTWVGDQ--QALEHLQEYLGDRR--GNFYLAYATGRS--------YHSARELQKQVGL   57 (244)
T ss_dssp             EEEECTBTTTBSCH--HHHHHHHHHHHTTG--GGEEEEEECSSC--------HHHHHHHHHHHTC
T ss_pred             EEEEeCCCCCcCCH--HHHHHHHHHHHHhc--CCCEEEEEcCCC--------HHHHHHHHHHcCC
Confidence            78899999998632  22356777777754  488999999885        3556777777776

>1xvi_A MPGP, YEDP, putative mannosyl-3-phosphoglycerate phosphatase; hypothetical protein, conserved protein, phophatase-like domain; HET: 1PE PG4 PGE; 2.26A {Escherichia coli K12} SCOP: c.108.1.10

Probab=89.18  E-value=0.14  Score=47.06  Aligned_cols=39  Identities=15%  Similarity=0.262  Sum_probs=33.9

Q ss_pred             hHHHHHHHhC-CCCCc--EEEEccCCcccHHHHHHcCCeEEEEc
Q 017982          262 TAEEIEKHFG-CQSSQ--LIMVGDRPFTDIVYGNRNGFLTILTE  302 (363)
Q Consensus       262 ~~~~alk~lg-l~pee--~vmVGDrL~TDI~~A~raGi~TIlV~  302 (363)
                      ++..+++.+| +++++  +++|||+. +|+.+...+|+ +|.|.
T Consensus       193 ~l~~l~~~~~~~~~~~~~~~~~GD~~-nD~~m~~~ag~-~va~~  234 (275)
T 1xvi_A          193 AANWIIATYQQLSGKRPTTLGLGDGP-NDAPLLEVMDY-AVIVK  234 (275)
T ss_dssp             HHHHHHHHHHHHHSSCCEEEEEESSG-GGHHHHHTSSE-EEECC
T ss_pred             HHHHHHHHhhhcccccCcEEEECCCh-hhHHHHHhCCc-eEEec
Confidence            4678889999 99999  99999998 89999999997 46664

>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}

Probab=87.00  E-value=5.5  Score=35.33  Aligned_cols=87  Identities=11%  Similarity=0.163  Sum_probs=58.7

Q ss_pred             hhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCeEEEcccCCCchhHHHHHH---HhCCCCCcEEEE
Q 017982          204 GPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKVIRHRVKKPAGTAEEIEK---HFGCQSSQLIMV  280 (363)
Q Consensus       204 p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~~I~~~~kKP~p~~~~alk---~lgl~pee~vmV  280 (363)
                      -++..+|..++ +.+-+++|++...-.       ..++.+.+.+|++........+.. .+.+++   .-|+    -++|
T Consensus        81 ~Dil~al~~a~-~~~~kIavvg~~~~~-------~~~~~~~~ll~~~i~~~~~~~~~e-~~~~i~~l~~~G~----~vvV  147 (196)
T 2q5c_A           81 FDTMRAVYNAK-RFGNELALIAYKHSI-------VDKHEIEAMLGVKIKEFLFSSEDE-ITTLISKVKTENI----KIVV  147 (196)
T ss_dssp             HHHHHHHHHHG-GGCSEEEEEEESSCS-------SCHHHHHHHHTCEEEEEEECSGGG-HHHHHHHHHHTTC----CEEE
T ss_pred             hHHHHHHHHHH-hhCCcEEEEeCcchh-------hHHHHHHHHhCCceEEEEeCCHHH-HHHHHHHHHHCCC----eEEE
Confidence            36777788887 466699999976521       235677788898854333344443 223333   3354    3589


Q ss_pred             ccCCcccHHHHHHcCCeEEEEcCCC
Q 017982          281 GDRPFTDIVYGNRNGFLTILTEPLS  305 (363)
Q Consensus       281 GDrL~TDI~~A~raGi~TIlV~p~~  305 (363)
                      ||.+ + ...|.+.|+.++++..+.
T Consensus       148 G~~~-~-~~~A~~~Gl~~vli~sg~  170 (196)
T 2q5c_A          148 SGKT-V-TDEAIKQGLYGETINSGE  170 (196)
T ss_dssp             ECHH-H-HHHHHHTTCEEEECCCCH
T ss_pred             CCHH-H-HHHHHHcCCcEEEEecCH
Confidence            9988 3 888999999999998654

>3to5_A CHEY homolog; alpha(5)beta(5), chemotaxis, FLIM, phosphorylation, motor AC signaling protein; 1.65A {Vibrio cholerae}

Probab=86.22  E-value=3.7  Score=34.09  Aligned_cols=115  Identities=11%  Similarity=0.160  Sum_probs=65.7

Q ss_pred             cCCCEEEEcCCceeecCCCCCcchhHHHHHHHHHHhCCCe-EEEEeCCCCCCCCCccHHHHHHHHHHhCCeEEEcccCCC
Q 017982          181 RGFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHD-IAVFSNSAGLYEYDNDASKARKLEGKIGIKVIRHRVKKP  259 (363)
Q Consensus       181 ~GIkaVV~DlDnTL~~~~~~~~~p~v~e~L~~Lk~~~Gik-l~IVSN~~g~~~~dp~~~~a~~i~~~LGi~~I~~~~kKP  259 (363)
                      .++|++++|-|.+.            .+.++.+.+..|+. +..++|.          ..+....+....+.|.....=|
T Consensus        11 k~~rILiVDD~~~~------------r~~l~~~L~~~G~~~v~~a~~g----------~~al~~~~~~~~DlillD~~MP   68 (134)
T 3to5_A           11 KNMKILIVDDFSTM------------RRIVKNLLRDLGFNNTQEADDG----------LTALPMLKKGDFDFVVTDWNMP   68 (134)
T ss_dssp             TTCCEEEECSCHHH------------HHHHHHHHHHTTCCCEEEESSH----------HHHHHHHHHHCCSEEEEESCCS
T ss_pred             CCCEEEEEeCCHHH------------HHHHHHHHHHcCCcEEEEECCH----------HHHHHHHHhCCCCEEEEcCCCC
Confidence            46788877755443            34555554567986 4455554          4454555555666554344456


Q ss_pred             ch-hHHHHHHHh---C-CCCCcEEE-EccCCcccHHHHHHcCCeEEEEcCCCCCCchhHHHHHHHHH
Q 017982          260 AG-TAEEIEKHF---G-CQSSQLIM-VGDRPFTDIVYGNRNGFLTILTEPLSLAEEPFIVRQVRKLE  320 (363)
Q Consensus       260 ~p-~~~~alk~l---g-l~pee~vm-VGDrL~TDI~~A~raGi~TIlV~p~~~~~e~~~t~~~R~lE  320 (363)
                      .- ++ ++++.+   . ...--++| -|..-..++..|.++|+...+++|...  +....++.+.+|
T Consensus        69 ~mdG~-el~~~ir~~~~~~~ipvI~lTa~~~~~~~~~~~~~Ga~~yl~KP~~~--~~L~~~i~~~l~  132 (134)
T 3to5_A           69 GMQGI-DLLKNIRADEELKHLPVLMITAEAKREQIIEAAQAGVNGYIVKPFTA--ATLKEKLDKIFE  132 (134)
T ss_dssp             SSCHH-HHHHHHHHSTTTTTCCEEEEESSCCHHHHHHHHHTTCCEEEESSCCH--HHHHHHHHHHCC
T ss_pred             CCCHH-HHHHHHHhCCCCCCCeEEEEECCCCHHHHHHHHHCCCCEEEECCCCH--HHHHHHHHHHHh
Confidence            64 43 233333   2 11112444 465555688899999999999999863  334444444444

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	363
d1yv9a1	253	c.108.1.14 (A:4-256) Putative hydrolase EF1188 {En	8e-04

>d1yv9a1 c.108.1.14 (A:4-256) Putative hydrolase EF1188 {Enterococcus faecalis [TaxId: 1351]} Length = 253

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NagD-like
domain: Putative hydrolase EF1188
species: Enterococcus faecalis [TaxId: 1351]

 Score = 38.1 bits (87), Expect = 8e-04
 Identities = 18/47 (38%), Positives = 24/47 (51%)

Query: 254 HRVKKPAGTAEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGFLTIL 300
           +  K  A   E    H G +  Q+IMVGD   TDI  G +NG  ++L
Sbjct: 177 YIGKPKAIIMERAIAHLGVEKEQVIMVGDNYETDIQSGIQNGIDSLL 223

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	363
d2fpwa1	161	Histidine biosynthesis bifunctional protein HisB,	99.71
d2o2xa1	209	Hypothetical protein Mll2559 {Mesorhizobium loti [	99.7
d1u7pa_	164	Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mu	99.69
d2gmwa1	182	D,D-heptose 1,7-bisphosphate phosphatase GmhB {Esc	99.68
d2c4na1	250	NagD {Escherichia coli [TaxId: 562]}	99.66
d1zs9a1	253	E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]}	99.63
d1wvia_	253	Putative phosphatase SMU.1415c {Streptococcus muta	99.62
d1vjra_	261	Hypothetical protein TM1742 {Thermotoga maritima [	99.62
d1yv9a1	253	Putative hydrolase EF1188 {Enterococcus faecalis [	99.61
d1te2a_	218	Phosphatase YniC {Escherichia coli [TaxId: 562]}	99.6
d2go7a1	204	Hypothetical protein SP2064 {Streptococcus pneumon	99.6
d1zrna_	220	L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., s	99.58
d2hdoa1	207	Phosphoglycolate phosphatase {Lactobacillus planta	99.57
d2gfha1	247	N-acylneuraminate-9-phosphatase NANP {Mouse (Mus m	99.57
d1zd3a1	225	Epoxide hydrolase, N-terminal domain {Human (Homo	99.56
d2hsza1	224	Phosphoglycolate phosphatase Gph {Haemophilus somn	99.56
d1swva_	257	Phosphonoacetaldehyde hydrolase {Bacillus cereus [	99.55
d1qq5a_	245	L-2-Haloacid dehalogenase, HAD {Xanthobacter autot	99.54
d1o08a_	221	beta-Phosphoglucomutase {Lactococcus lactis [TaxId	99.53
d2ah5a1	210	predicted phosphatase SP0104 {Streptococcus pneumo	99.5
d2fi1a1	187	Putative hydrolase SP0805 {Streptococcus pneumonia	99.49
d1x42a1	230	Hypothetical protein PH0459 {Archaeon Pyrococcus h	99.45
d2fdra1	222	Hypothetical protein Atu0790 {Agrobacterium tumefa	99.44
d1cr6a1	222	Epoxide hydrolase, N-terminal domain {Mouse (Mus m	99.37
d1yj5a1	195	5' polynucleotide kinase-3' phosphatase, middle do	99.27
d1ltqa1	149	Polynucleotide kinase, phosphatase domain {Bacteri	99.26
d2b0ca1	197	Putative phosphatase YihX {Escherichia coli [TaxId	99.24
d2hcfa1	228	Hypothetical protein CT1708 {Chlorobium tepidum [T	99.18
d2g80a1	225	Protein UTR4 {Baker's yeast (Saccharomyces cerevis	98.84
d1qyia_	380	Hypothetical protein MW1667 (SA1546) {Staphylococc	98.75
d1wr8a_	230	Phosphoglycolate phosphatase, PGPase {Pyrococcus h	98.69
d2feaa1	226	2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate	98.55
d1nnla_	217	Phosphoserine phosphatase {Human (Homo sapiens) [T	98.49
d1l6ra_	225	Phosphoglycolate phosphatase, PGPase {Archaeon The	98.47
d1j97a_	210	Phosphoserine phosphatase {Archaeon Methanococcus	98.47
d1k1ea_	177	Probable phosphatase YrbI {Haemophilus influenzae,	98.37
d2b82a1	209	Class B acid phosphatase, AphA {Escherichia coli [	98.33
d1nrwa_	285	Hypothetical protein YwpJ {Bacillus subtilis [TaxI	98.26
d2b8ea1	135	Cation-transporting ATPase {Archaeon Archaeoglobus	98.18
d1rlma_	269	Sugar phosphatase SupH (YbiV) {Escherichia coli [T	98.06
d1rkqa_	271	Hypothetical protein YidA {Escherichia coli [TaxId	98.02
d1xvia_	232	Putative mannosyl-3-phosphoglycerate phosphatase M	97.93
d1wzca1	243	Putative mannosyl-3-phosphoglycerate phosphatase M	97.62
d2bdea1	458	Cytosolic IMP-GMP specific 5'-nucleotidase {Legion	97.58
d1rkua_	206	Homoserine kinase ThrH {Pseudomonas aeruginosa [Ta	97.49
d2b30a1	283	PFL1270w orthologue {Plasmodium vivax [TaxId: 5855	97.36
d1wpga2	168	Calcium ATPase, catalytic domain P {Rabbit (Orycto	97.04
d1s2oa1	244	Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc	96.82
d2rbka1	260	Sugar-phosphate phosphatase BT4131 {Bacteroides th	96.47
d2amya1	243	Phosphomannomutase 2 {Human (Homo sapiens) [TaxId:	96.13
d1xpja_	124	Hypothetical protein VC0232 {Vibrio cholerae [TaxI	95.91
d1nf2a_	267	Hypothetical protein TM0651 {Thermotoga maritima [	95.47
d2obba1	122	Hypothetical protein BT0820 {Bacteroides thetaiota	95.46
d1ta0a_	181	Carboxy-terminal domain RNA polymerase II polypept	95.27
d2bdua1	291	Cytosolic 5'-nucleotidase III {Mouse (Mus musculus	95.22
d1u02a_	229	Trehalose-6-phosphate phosphatase related protein	94.29
d2fuea1	244	Phosphomannomutase 1 {Human (Homo sapiens) [TaxId:	93.24
d2ayxa1	133	Sensor kinase protein RcsC, C-terminal domain {Esc	92.55
d1kgsa2	122	PhoB receiver domain {Thermotoga maritima [TaxId:	91.65
d1dbwa_	123	Transcriptional regulatory protein FixJ, receiver	90.27
d1jbea_	128	CheY protein {Escherichia coli [TaxId: 562]}	90.25
d2b30a1	283	PFL1270w orthologue {Plasmodium vivax [TaxId: 5855	88.07
d1zh2a1	119	Transcriptional regulatory protein KdpE, N-termina	87.86
d2pl1a1	119	PhoP receiver domain {Escherichia coli [TaxId: 562	87.84
d2a9pa1	117	DNA-binding response regulator MicA, N-terminal do	87.24
d1ys7a2	121	Transcriptional regulatory protein PrrA, N-termina	86.64
d1mvoa_	121	PhoP receiver domain {Bacillus subtilis [TaxId: 14	86.63
d1ny5a1	137	Transcriptional activator sigm54 (NtrC1), N-termin	86.46
d1u0sy_	118	CheY protein {Thermotoga maritima [TaxId: 2336]}	86.25
d2rbka1	260	Sugar-phosphate phosphatase BT4131 {Bacteroides th	85.55
d1yioa2	128	Response regulatory protein StyR, N-terminal domai	85.54
d1q92a_	195	5'(3')-deoxyribonucleotidase (dNT-2) {Human (Homo	85.0
d1zgza1	120	TorCAD operon transcriptional regulator TorD, N-te	84.84
d2pjua1	186	Propionate catabolism operon regulatory protein Pr	83.57
d1krwa_	123	NTRC receiver domain {Salmonella typhimurium [TaxI	83.31
d1xhfa1	121	Aerobic respiration control protein ArcA, N-termin	82.85
d1peya_	119	Sporulation response regulator Spo0F {Bacillus sub	82.8
d1dcfa_	134	Receiver domain of the ethylene receptor {Thale cr	82.28
d1nf2a_	267	Hypothetical protein TM0651 {Thermotoga maritima [	81.84
d1mb3a_	123	Cell division response regulator DivK {Caulobacter	81.29
d1qkka_	140	Transcriptional regulatory protein DctD, receiver	80.66

>d2fpwa1 c.108.1.19 (A:3-163) Histidine biosynthesis bifunctional protein HisB, phosphatase domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Histidinol phosphatase-like
domain: Histidine biosynthesis bifunctional protein HisB, phosphatase domain
species: Escherichia coli [TaxId: 562]

Probab=99.71  E-value=6.4e-18  Score=147.08  Aligned_cols=122  Identities=18%  Similarity=0.223  Sum_probs=89.1

Q ss_pred             CEEEEcCCceeecC----------CCCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccH-------HHHHHHHHH
Q 017982          184 KGVVFDKDNTLTAP----------YSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDA-------SKARKLEGK  246 (363)
Q Consensus       184 kaVV~DlDnTL~~~----------~~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~-------~~a~~i~~~  246 (363)
                      |+|+||+|+||+..          ....++|++.+.|+.|+ +.|++++|+||.++.....-..       ......+..
T Consensus         3 K~i~~D~DGtL~~~~~~~~~~~~~~~~~~~pgv~e~L~~L~-~~g~~l~i~TNq~~ia~~~~~~~~~~~~~~~l~~~l~~   81 (161)
T d2fpwa1           3 KYLFIDRDGTLISEPPSDFQVDRFDKLAFEPGVIPQLLKLQ-KAGYKLVMITNQDGLGTQSFPQADFDGPHNLMMQIFTS   81 (161)
T ss_dssp             EEEEECCBTTTBCCC--CCCCCSGGGCCBCTTHHHHHHHHH-HTTEEEEEEEECTTTTSTTSCHHHHHHHHHHHHHHHHH
T ss_pred             cEEEEeCCCCeEeeCCCCCccCCHHHceECccHHHHHHHHH-HcCCceeeecccccchhHHHHHHHhhhhhhhhhhhccc
Confidence            78999999999641          12357899999999998 6899999999997543211111       123344555


Q ss_pred             hCCeE--EE---------cccCCCchh-HHHHHHHhCCCCCcEEEEccCCcccHHHHHHcCCeEEEEcCCCCC
Q 017982          247 IGIKV--IR---------HRVKKPAGT-AEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGFLTILTEPLSLA  307 (363)
Q Consensus       247 LGi~~--I~---------~~~kKP~p~-~~~alk~lgl~pee~vmVGDrL~TDI~~A~raGi~TIlV~p~~~~  307 (363)
                      .|+..  ++         ...+||+|. +.++++++|++|++++||||+. +||++|+++||.+|||.+....
T Consensus        82 ~~~~~~~i~~~~~~~~~~~~~~KP~p~~~~~~~~~~~id~~~~~~IGD~~-~Di~aA~~aG~~~i~i~~~~~~  153 (161)
T d2fpwa1          82 QGVQFDEVLICPHLPADECDCRKPKVKLVERYLAEQAMDRANSYVIGDRA-TDIQLAENMGINGLRYDRETLN  153 (161)
T ss_dssp             TTCCEEEEEEECCCGGGCCSSSTTSSGGGGGGC----CCGGGCEEEESSH-HHHHHHHHHTSEEEECBTTTBC
T ss_pred             cccccceeeeccccccccccccccccHHHHHHHHhcCCChhcEEEECCCH-HHHHHHHHcCCeEEEECCCCCC
Confidence            56542  21         134699995 5899999999999999999998 8999999999999999877633

>d2o2xa1 c.108.1.19 (A:8-216) Hypothetical protein Mll2559 {Mesorhizobium loti [TaxId: 381]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Histidinol phosphatase-like
domain: Hypothetical protein Mll2559
species: Mesorhizobium loti [TaxId: 381]

Probab=99.70  E-value=1.3e-17  Score=150.70  Aligned_cols=122  Identities=20%  Similarity=0.298  Sum_probs=91.2

Q ss_pred             CCCEEEEcCCceeec-------CCCCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCC--Cc-----cHHHHHHHHHHh
Q 017982          182 GFKGVVFDKDNTLTA-------PYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEY--DN-----DASKARKLEGKI  247 (363)
Q Consensus       182 GIkaVV~DlDnTL~~-------~~~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~--dp-----~~~~a~~i~~~L  247 (363)
                      .+++|+||+|+||+.       +....++|++.++|++|+ +.|++++|+||+++....  ..     ........+...
T Consensus        22 ~~~Aif~DrDGtl~~~~~y~~~~~~~~l~pgv~e~L~~L~-~~G~~l~IvTNQ~gi~~g~~~~~~~~~~~~~~~~~l~~~  100 (209)
T d2o2xa1          22 HLPALFLDRDGTINVDTDYPSDPAEIVLRPQMLPAIATAN-RAGIPVVVVTNQSGIARGYFGWSAFAAVNGRVLELLREE  100 (209)
T ss_dssp             SCCCEEECSBTTTBCCCSCTTCGGGCCBCGGGHHHHHHHH-HHTCCEEEEEECHHHHTTSCCHHHHHHHHHHHHHHHHHT
T ss_pred             CCCEEEEeCCCCeECCCCCCCCHHHeEecccHHHHHHHHH-hhCCeEEEecccccchhhhhhhhhhhhhhhHHHHHhhhc
Confidence            578999999999974       223468999999999998 579999999997632211  11     011223334444


Q ss_pred             CCe--EEE----c------------ccCCCchh-HHHHHHHhCCCCCcEEEEccCCcccHHHHHHcCCeEEEEcCCC
Q 017982          248 GIK--VIR----H------------RVKKPAGT-AEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGFLTILTEPLS  305 (363)
Q Consensus       248 Gi~--~I~----~------------~~kKP~p~-~~~alk~lgl~pee~vmVGDrL~TDI~~A~raGi~TIlV~p~~  305 (363)
                      |+.  .++    +            .++||++. +.++++++++++++++||||+. +||++|+++||.+|+|..+.
T Consensus       101 g~~~~~~~~~~~~~~~~~~~~~~~~~~rKP~p~ml~~a~~~~~i~~~~~~~VGD~~-~Di~aA~~AGi~~i~v~~g~  176 (209)
T d2o2xa1         101 GVFVDMVLACAYHEAGVGPLAIPDHPMRKPNPGMLVEAGKRLALDLQRSLIVGDKL-ADMQAGKRAGLAQGWLVDGE  176 (209)
T ss_dssp             TCCCSEEEEECCCTTCCSTTCCSSCTTSTTSCHHHHHHHHHHTCCGGGCEEEESSH-HHHHHHHHTTCSEEEEETCC
T ss_pred             ccccceEEEecccccccccccccccccccccchhhhHhHHHhCCCccceEEeCCCH-HHHHHHHHCCCcEEEEeCCC
Confidence            542  221    1            23699995 5899999999999999999997 89999999999999997544

>d1u7pa_ c.108.1.17 (A:) Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Magnesium-dependent phosphatase-1, Mdp1
domain: Magnesium-dependent phosphatase-1, Mdp1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.69  E-value=3.8e-17  Score=140.34  Aligned_cols=113  Identities=20%  Similarity=0.200  Sum_probs=92.0

Q ss_pred             CEEEEcCCceeecC-----------------------CCCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHH
Q 017982          184 KGVVFDKDNTLTAP-----------------------YSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKA  240 (363)
Q Consensus       184 kaVV~DlDnTL~~~-----------------------~~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a  240 (363)
                      |+||||+|+||...                       ....++|++.++|+.|+ +.|++++|+||+..       ...+
T Consensus         6 K~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~pgv~e~L~~L~-~~G~~~~v~S~~~~-------~~~~   77 (164)
T d1u7pa_           6 KLAVFDLDYTLWPFWVDTHVDPPFHKSSDGTVRDRRGQNIQLYPEVPEVLGRLQ-SLGVPVAAASRTSE-------IQGA   77 (164)
T ss_dssp             SEEEECCBTTTBSSCTTTTCCSCEEECTTSCEEETTCCEECCCTTHHHHHHHHH-HTTCCEEEEECCSC-------HHHH
T ss_pred             CEEEEcCCCcccCCccccccCccHhHHhcchHhhhhccccccchHHHHHHHHHH-HCCCcEEEEecccc-------chhh
Confidence            78999999999531                       11257999999999998 58999999998852       2445


Q ss_pred             HHHHHHhCCeEE---EcccCCCch-hHHHHHHHhCCCCCcEEEEccCCcccHHHHHHcCCeEEEEcCCC
Q 017982          241 RKLEGKIGIKVI---RHRVKKPAG-TAEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGFLTILTEPLS  305 (363)
Q Consensus       241 ~~i~~~LGi~~I---~~~~kKP~p-~~~~alk~lgl~pee~vmVGDrL~TDI~~A~raGi~TIlV~p~~  305 (363)
                      +.+++.+++...   .....||.+ .+.++++++|++|++++||||+. .|+.+|+++|+.+|+|..+.
T Consensus        78 ~~~l~~~~~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~l~igD~~-~di~aA~~aG~~~i~v~~G~  145 (164)
T d1u7pa_          78 NQLLELFDLGKYFIQREIYPGSKVTHFERLHHKTGVPFSQMVFFDDEN-RNIIDVGRLGVTCIHIRDGM  145 (164)
T ss_dssp             HHHHHHTTCGGGCSEEEESSSCHHHHHHHHHHHHCCCGGGEEEEESCH-HHHHHHHTTTCEEEECSSCC
T ss_pred             ccchhcccccccceeeecccCCChHHHHHHHHHhCCChHHEEEEcCCH-HHHHHHHHcCCEEEEECCCC
Confidence            667778877521   134578888 57899999999999999999998 79999999999999998665

>d2gmwa1 c.108.1.19 (A:24-205) D,D-heptose 1,7-bisphosphate phosphatase GmhB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Histidinol phosphatase-like
domain: D,D-heptose 1,7-bisphosphate phosphatase GmhB
species: Escherichia coli [TaxId: 562]

Probab=99.68  E-value=4.3e-17  Score=142.65  Aligned_cols=124  Identities=15%  Similarity=0.164  Sum_probs=90.3

Q ss_pred             CCCEEEEcCCceeec-------CCCCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccH-------HHHHHHHHHh
Q 017982          182 GFKGVVFDKDNTLTA-------PYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDA-------SKARKLEGKI  247 (363)
Q Consensus       182 GIkaVV~DlDnTL~~-------~~~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~-------~~a~~i~~~L  247 (363)
                      .|++|+||+||||+.       +....++|++.++|+.|+ +.|++++|+||+++........       ..........
T Consensus         1 ~~~Av~~DrDGtl~~~~~y~~~~~~~~~~~gv~e~l~~L~-~~g~~~~ivTNq~~i~~~~~~~~~~~~~~~~~~~~~~~~   79 (182)
T d2gmwa1           1 SVPAIFLDRDGTINVDHGYVHEIDNFEFIDGVIDAMRELK-KMGFALVVVTNQSGIARGKFTEAQFETLTEWMDWSLADR   79 (182)
T ss_dssp             CBCEEEECSBTTTBCCCSSCCSGGGCCBCTTHHHHHHHHH-HTTCEEEEEEECTHHHHTSSCHHHHHHHHHHHHHHHHHT
T ss_pred             CCCEEEEeCCCCccCCCCCCCCHHHeeECCCHHHHHHHHh-hcCchhhhhhccchhhhhhhHHHhhhhhhhhhhhhhhhh
Confidence            378999999999974       123468999999999998 5899999999997422111001       1112223333


Q ss_pred             CCeE--E-E---------------cccCCCchh-HHHHHHHhCCCCCcEEEEccCCcccHHHHHHcCCeE-EEEcCCCCC
Q 017982          248 GIKV--I-R---------------HRVKKPAGT-AEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGFLT-ILTEPLSLA  307 (363)
Q Consensus       248 Gi~~--I-~---------------~~~kKP~p~-~~~alk~lgl~pee~vmVGDrL~TDI~~A~raGi~T-IlV~p~~~~  307 (363)
                      |+..  + +               ..++||+|. +..+++++++++++++||||+. +||++|+++|+.+ ++|..+...
T Consensus        80 ~~~~~~~~~cp~~p~~~~~~~~~~~~~rKP~p~m~~~~~~~~~i~~~~s~mVGDs~-~Di~aA~~Ag~~~~~lv~~g~~~  158 (182)
T d2gmwa1          80 DVDLDGIYYCPHHPQGSVEEFRQVCDCRKPHPGMLLSARDYLHIDMAASYMVGDKL-EDMQAAVAANVGTKVLVRTGKPI  158 (182)
T ss_dssp             TCCCSEEEEECCBTTCSSGGGBSCCSSSTTSCHHHHHHHHHHTBCGGGCEEEESSH-HHHHHHHHTTCSEEEEESSSSCC
T ss_pred             cccccceeecccccccccccccccccccCCccccccchhhhcccccccccccCCCH-HHHHHHHHhCCCcEEEECCCCCC
Confidence            4431  1 1               135799996 5899999999999999999998 8999999999976 778766543

>d2c4na1 c.108.1.14 (A:1-250) NagD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NagD-like
domain: NagD
species: Escherichia coli [TaxId: 562]

Probab=99.66  E-value=2.8e-16  Score=142.60  Aligned_cols=52  Identities=29%  Similarity=0.339  Sum_probs=47.5

Q ss_pred             cCCCch-hHHHHHHHhCCCCCcEEEEccCCcccHHHHHHcCCeEEEEcCCCCC
Q 017982          256 VKKPAG-TAEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGFLTILTEPLSLA  307 (363)
Q Consensus       256 ~kKP~p-~~~~alk~lgl~pee~vmVGDrL~TDI~~A~raGi~TIlV~p~~~~  307 (363)
                      .+||++ .++.+++++|++|++++||||++.+||.+|+++||.||||..+...
T Consensus       174 ~~KP~p~~~~~a~~~lgi~p~e~v~IGD~~~~DI~~a~~aG~~tilV~~G~~~  226 (250)
T d2c4na1         174 VGKPSPWIIRAALNKMQAHSEETVIVGDNLRTDILAGFQAGLETILVLSGVSS  226 (250)
T ss_dssp             CSTTSTHHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHTTCEEEEESSSSCC
T ss_pred             cccchhhhHhhhhhhhcCCchheEEecCChHHHHHHHHHCCCCEEEECCCCCC
Confidence            469999 5799999999999999999999989999999999999999876544

>d1zs9a1 c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Enolase-phosphatase E1
domain: E-1 enzyme
species: Human(Homo sapiens) [TaxId: 9606]

Probab=99.63  E-value=6.7e-16  Score=134.70  Aligned_cols=92  Identities=10%  Similarity=0.199  Sum_probs=76.6

Q ss_pred             cchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCeE-------EE--cccCCCch-hHHHHHHHhC
Q 017982          202 LWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKV-------IR--HRVKKPAG-TAEEIEKHFG  271 (363)
Q Consensus       202 ~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~~-------I~--~~~kKP~p-~~~~alk~lg  271 (363)
                      ++|++.++|.+|+ +.|++++|+||++        ....+.+.+.+|+..       +.  ....||++ .+..+++++|
T Consensus       128 ~~pg~~e~l~~L~-~~g~~l~i~Tn~~--------~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~KP~p~~~~~~~~~~~  198 (253)
T d1zs9a1         128 FFADVVPAVRKWR-EAGMKVYIYSSGS--------VEAQKLLFGHSTEGDILELVDGHFDTKIGHKVESESYRKIADSIG  198 (253)
T ss_dssp             CCTTHHHHHHHHH-HTTCEEEEECSSC--------HHHHHHHHHTBTTBCCGGGCSEEECGGGCCTTCHHHHHHHHHHHT
T ss_pred             cCCCHHHHHHHHh-hccCceeecCCCc--------HHHHHHHHHHcCcchhhhhcceeeccccccCCCcHHHHHHHHHhC
Confidence            4688999999998 5799999999996        345556667777641       11  24579999 6799999999


Q ss_pred             CCCCcEEEEccCCcccHHHHHHcCCeEEEEcC
Q 017982          272 CQSSQLIMVGDRPFTDIVYGNRNGFLTILTEP  303 (363)
Q Consensus       272 l~pee~vmVGDrL~TDI~~A~raGi~TIlV~p  303 (363)
                      ++|++|+||||+. .||.+|+++||+||||..
T Consensus       199 ~~p~~~l~vgD~~-~dv~aA~~aG~~ti~v~r  229 (253)
T d1zs9a1         199 CSTNNILFLTDVT-REASAAEEADVHVAVVVR  229 (253)
T ss_dssp             SCGGGEEEEESCH-HHHHHHHHTTCEEEEECC
T ss_pred             CCcCcEEEEeCCH-HHHHHHHHcCCEEEEEeC
Confidence            9999999999997 799999999999999973

>d1wvia_ c.108.1.14 (A:) Putative phosphatase SMU.1415c {Streptococcus mutans [TaxId: 1309]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NagD-like
domain: Putative phosphatase SMU.1415c
species: Streptococcus mutans [TaxId: 1309]

Probab=99.62  E-value=1.2e-15  Score=138.67  Aligned_cols=52  Identities=29%  Similarity=0.386  Sum_probs=47.2

Q ss_pred             CCCch-hHHHHHHHhCCCCCcEEEEccCCcccHHHHHHcCCeEEEEcCCCCCC
Q 017982          257 KKPAG-TAEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGFLTILTEPLSLAE  308 (363)
Q Consensus       257 kKP~p-~~~~alk~lgl~pee~vmVGDrL~TDI~~A~raGi~TIlV~p~~~~~  308 (363)
                      +||+| .++.+++++|++|++|+||||++.+||.+|+++||+||||..+..+.
T Consensus       179 gKP~p~~~~~al~~l~i~~~~~~mIGDs~~~DI~gA~~aG~~si~V~~G~~~~  231 (253)
T d1wvia_         179 GKPEAVIMNKALDRLGVKRHEAIMVGDNYLTDITAGIKNDIATLLVTTGFTKP  231 (253)
T ss_dssp             STTSHHHHHHHHHHHTSCGGGEEEEESCTTTTHHHHHHTTCEEEEESSSSSCT
T ss_pred             ccCCcccceehhhhccccccceEEEcCChHHHHHHHHHCCCCEEEECCCCCCH
Confidence            49999 57999999999999999999999899999999999999998765443

>d1vjra_ c.108.1.14 (A:) Hypothetical protein TM1742 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NagD-like
domain: Hypothetical protein TM1742
species: Thermotoga maritima [TaxId: 2336]

Probab=99.62  E-value=1e-15  Score=138.83  Aligned_cols=51  Identities=31%  Similarity=0.561  Sum_probs=46.9

Q ss_pred             CCCch-hHHHHHHHhCCCCCcEEEEccCCcccHHHHHHcCCeEEEEcCCCCC
Q 017982          257 KKPAG-TAEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGFLTILTEPLSLA  307 (363)
Q Consensus       257 kKP~p-~~~~alk~lgl~pee~vmVGDrL~TDI~~A~raGi~TIlV~p~~~~  307 (363)
                      +||++ .+..+++++|++|++++||||++.+||.+|+++||.||||..+..+
T Consensus       184 ~KP~p~~~~~a~~~l~~~~~~~lmVGD~~~~DI~ga~~aG~~si~V~~G~~~  235 (261)
T d1vjra_         184 GKPNPLVVDVISEKFGVPKERMAMVGDRLYTDVKLGKNAGIVSILVLTGETT  235 (261)
T ss_dssp             STTSTHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHHHTCEEEEESSSSCC
T ss_pred             CCCcHHHHHHHHhhhccCchhcceecCChhHHHHHHHHCCCcEEEECCCCCC
Confidence            69999 5799999999999999999999989999999999999999876544

>d1yv9a1 c.108.1.14 (A:4-256) Putative hydrolase EF1188 {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NagD-like
domain: Putative hydrolase EF1188
species: Enterococcus faecalis [TaxId: 1351]

Probab=99.61  E-value=1.8e-15  Score=137.02  Aligned_cols=54  Identities=33%  Similarity=0.442  Sum_probs=48.4

Q ss_pred             cCCCch-hHHHHHHHhCCCCCcEEEEccCCcccHHHHHHcCCeEEEEcCCCCCCc
Q 017982          256 VKKPAG-TAEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGFLTILTEPLSLAEE  309 (363)
Q Consensus       256 ~kKP~p-~~~~alk~lgl~pee~vmVGDrL~TDI~~A~raGi~TIlV~p~~~~~e  309 (363)
                      .+||++ .+.++++++|++|++++||||++.+||.+|+++||+||||..+....+
T Consensus       178 ~~KP~~~~~~~~~~~~gi~~~~~l~IGD~~~~DI~~a~~aG~~si~V~~G~~~~~  232 (253)
T d1yv9a1         178 IGKPKAIIMERAIAHLGVEKEQVIMVGDNYETDIQSGIQNGIDSLLVTSGFTPKS  232 (253)
T ss_dssp             CSTTSHHHHHHHHHHHCSCGGGEEEEESCTTTHHHHHHHHTCEEEEETTSSSCSS
T ss_pred             ecccchhHHHHHHHHhCCCccceEEecCChHHHHHHHHHCCCCEEEECCCCCCHH
Confidence            489999 579999999999999999999998999999999999999987655444

>d1te2a_ c.108.1.6 (A:) Phosphatase YniC {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Phosphatase YniC
species: Escherichia coli [TaxId: 562]

Probab=99.60  E-value=2.2e-15  Score=131.50  Aligned_cols=95  Identities=13%  Similarity=0.171  Sum_probs=81.1

Q ss_pred             cchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCe----EEE----cccCCCch-hHHHHHHHhCC
Q 017982          202 LWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK----VIR----HRVKKPAG-TAEEIEKHFGC  272 (363)
Q Consensus       202 ~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~----~I~----~~~kKP~p-~~~~alk~lgl  272 (363)
                      .+|++.++|+.|+ +.|++++|+||+.        ...+..+++.+|+.    .+.    .+..||.+ .+..+++++|+
T Consensus        89 ~~pg~~~~l~~L~-~~g~~~~i~T~~~--------~~~~~~~l~~~~l~~~F~~i~~~~~~~~~Kp~~~~~~~~~~~l~~  159 (218)
T d1te2a_          89 LLPGVREAVALCK-EQGLLVGLASASP--------LHMLEKVLTMFDLRDSFDALASAEKLPYSKPHPQVYLDCAAKLGV  159 (218)
T ss_dssp             BCTTHHHHHHHHH-HTTCEEEEEESSC--------HHHHHHHHHHTTCGGGCSEEEECTTSSCCTTSTHHHHHHHHHHTS
T ss_pred             ccchHHHHHHHhh-hcccccccccccc--------ccccccccccccccccccccccccccccchhhHHHHHHHHHHcCC
Confidence            4689999999998 5799999999996        46678888899985    222    34679998 57999999999


Q ss_pred             CCCcEEEEccCCcccHHHHHHcCCeEEEEcCCCC
Q 017982          273 QSSQLIMVGDRPFTDIVYGNRNGFLTILTEPLSL  306 (363)
Q Consensus       273 ~pee~vmVGDrL~TDI~~A~raGi~TIlV~p~~~  306 (363)
                      +|++++||||+. +||.+|+++|+.+|+|.....
T Consensus       160 ~~~~~l~igD~~-~di~aA~~~G~~~i~v~~~~~  192 (218)
T d1te2a_         160 DPLTCVALEDSV-NGMIASKAARMRSIVVPAPEA  192 (218)
T ss_dssp             CGGGEEEEESSH-HHHHHHHHTTCEEEECCCTTT
T ss_pred             CchhcEEEeeCH-HHHHHHHHcCCEEEEECCCCC
Confidence            999999999998 899999999999999975443

>d2go7a1 c.108.1.6 (A:3-206) Hypothetical protein SP2064 {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Hypothetical protein SP2064
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=99.60  E-value=1.6e-15  Score=131.59  Aligned_cols=94  Identities=17%  Similarity=0.257  Sum_probs=79.2

Q ss_pred             CcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCe----EEE----cccCCCch-hHHHHHHHhC
Q 017982          201 TLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK----VIR----HRVKKPAG-TAEEIEKHFG  271 (363)
Q Consensus       201 ~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~----~I~----~~~kKP~p-~~~~alk~lg  271 (363)
                      .++|++.++|+.|+ +.|++++|+||+.         ..+..+++.+|+.    .+.    ....||.+ .+..+++++|
T Consensus        82 ~~~pgv~~~L~~L~-~~g~~~~v~Sn~~---------~~~~~~l~~~gl~~~f~~i~~s~~~~~~Kp~~~~~~~~~~~~~  151 (204)
T d2go7a1          82 VLMPGAREVLAWAD-ESGIQQFIYTHKG---------NNAFTILKDLGVESYFTEILTSQSGFVRKPSPEAATYLLDKYQ  151 (204)
T ss_dssp             EECTTHHHHHHHHH-HTTCEEEEECSSC---------THHHHHHHHHTCGGGEEEEECGGGCCCCTTSSHHHHHHHHHHT
T ss_pred             cccchHHhhhhccc-ccccchhhhcccc---------hhhhhhhhhcccccccccccccccccccchhHHHHHHHHHHhC
Confidence            46899999999998 5799999999985         2345677888886    232    24579998 5799999999


Q ss_pred             CCCCcEEEEccCCcccHHHHHHcCCeEEEEcCCC
Q 017982          272 CQSSQLIMVGDRPFTDIVYGNRNGFLTILTEPLS  305 (363)
Q Consensus       272 l~pee~vmVGDrL~TDI~~A~raGi~TIlV~p~~  305 (363)
                      ++|++|+||||+. .|+.+|+++||.+|+|.++.
T Consensus       152 ~~p~~~l~VgD~~-~Di~~A~~~G~~~i~v~~~~  184 (204)
T d2go7a1         152 LNSDNTYYIGDRT-LDVEFAQNSGIQSINFLEST  184 (204)
T ss_dssp             CCGGGEEEEESSH-HHHHHHHHHTCEEEESSCCS
T ss_pred             CCCceEEEEeCCH-HHHHHHHHcCCeEEEEcCCC
Confidence            9999999999997 79999999999999998664

>d1zrna_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., strain YL [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: HAD-related
domain: L-2-Haloacid dehalogenase, HAD
species: Pseudomonas sp., strain YL [TaxId: 306]

Probab=99.58  E-value=4.3e-15  Score=129.19  Aligned_cols=93  Identities=20%  Similarity=0.283  Sum_probs=77.1

Q ss_pred             cchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCe----EEE----cccCCCch-hHHHHHHHhCC
Q 017982          202 LWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK----VIR----HRVKKPAG-TAEEIEKHFGC  272 (363)
Q Consensus       202 ~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~----~I~----~~~kKP~p-~~~~alk~lgl  272 (363)
                      .++++.+.++.++ ..|++++|+||+.        ...++.+.+.+++.    .+.    .+..||++ .|+.+++++|+
T Consensus        94 ~~~~~~~~l~~l~-~~~~~~~i~tn~~--------~~~~~~~~~~~~~~~~fd~~~~s~~~~~~KP~p~~~~~~~~~~g~  164 (220)
T d1zrna_          94 PFSEVPDSLRELK-RRGLKLAILSNGS--------PQSIDAVVSHAGLRDGFDHLLSVDPVQVYKPDNRVYELAEQALGL  164 (220)
T ss_dssp             ECTTHHHHHHHHH-HTTCEEEEEESSC--------HHHHHHHHHHTTCGGGCSEEEESGGGTCCTTSHHHHHHHHHHHTS
T ss_pred             ccchhHHHHHHHH-hcCCeEEeecchH--------HHHHHHHHhhccccccccceeeeeeeeccccHHHHHHHHHHHhCC
Confidence            4578888898988 5799999999996        35666677776654    232    35689998 67999999999


Q ss_pred             CCCcEEEEccCCcccHHHHHHcCCeEEEEcCC
Q 017982          273 QSSQLIMVGDRPFTDIVYGNRNGFLTILTEPL  304 (363)
Q Consensus       273 ~pee~vmVGDrL~TDI~~A~raGi~TIlV~p~  304 (363)
                      +|++|+||||+. .||.+|+++||.||||...
T Consensus       165 ~p~e~l~VgD~~-~Di~~A~~aG~~~v~v~r~  195 (220)
T d1zrna_         165 DRSAILFVASNA-WDATGARYFGFPTCWINRT  195 (220)
T ss_dssp             CGGGEEEEESCH-HHHHHHHHHTCCEEEECTT
T ss_pred             CCceEEEEecCh-HhHHHHHHcCCEEEEEcCC
Confidence            999999999998 6999999999999999743

>d2hdoa1 c.108.1.6 (A:1-207) Phosphoglycolate phosphatase {Lactobacillus plantarum [TaxId: 1590]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Phosphoglycolate phosphatase
species: Lactobacillus plantarum [TaxId: 1590]

Probab=99.57  E-value=1.1e-15  Score=133.14  Aligned_cols=96  Identities=11%  Similarity=0.032  Sum_probs=79.5

Q ss_pred             CcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCe----EEE----cccCCCch-hHHHHHHHhC
Q 017982          201 TLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK----VIR----HRVKKPAG-TAEEIEKHFG  271 (363)
Q Consensus       201 ~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~----~I~----~~~kKP~p-~~~~alk~lg  271 (363)
                      .++|++.+.|+.|+ + +++++|+||+.        ...+..+++.+|+.    .+.    ....||++ .+..+++++|
T Consensus        82 ~~~~g~~~~L~~l~-~-~~~~~ivT~~~--------~~~~~~~l~~~~l~~~f~~i~~~~~~~~~KP~p~~~~~~~~~~~  151 (207)
T d2hdoa1          82 ELYPGITSLFEQLP-S-ELRLGIVTSQR--------RNELESGMRSYPFMMRMAVTISADDTPKRKPDPLPLLTALEKVN  151 (207)
T ss_dssp             EECTTHHHHHHHSC-T-TSEEEEECSSC--------HHHHHHHHTTSGGGGGEEEEECGGGSSCCTTSSHHHHHHHHHTT
T ss_pred             ccccchhhhhhhhc-c-ccccccccccc--------ccccccccccccccccccccccccccccchhhhhhhccccccee
Confidence            36789999999996 3 68999999985        46778888888874    222    24679999 5799999999


Q ss_pred             CCCCcEEEEccCCcccHHHHHHcCCeEEEEcCCCCC
Q 017982          272 CQSSQLIMVGDRPFTDIVYGNRNGFLTILTEPLSLA  307 (363)
Q Consensus       272 l~pee~vmVGDrL~TDI~~A~raGi~TIlV~p~~~~  307 (363)
                      ++|++++||||+. +||.+|+++||.+|+|..+..+
T Consensus       152 ~~~~~~l~VgDs~-~Di~~a~~aG~~~i~v~~g~~~  186 (207)
T d2hdoa1         152 VAPQNALFIGDSV-SDEQTAQAANVDFGLAVWGMDP  186 (207)
T ss_dssp             CCGGGEEEEESSH-HHHHHHHHHTCEEEEEGGGCCT
T ss_pred             eeccceeEecCCH-HHHHHHHHcCCeEEEEecCCCC
Confidence            9999999999997 8999999999999999854433

>d2gfha1 c.108.1.6 (A:1-247) N-acylneuraminate-9-phosphatase NANP {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: N-acylneuraminate-9-phosphatase NANP
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.57  E-value=9e-15  Score=129.87  Aligned_cols=95  Identities=19%  Similarity=0.206  Sum_probs=76.8

Q ss_pred             CcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCe----EEE----cccCCCch-hHHHHHHHhC
Q 017982          201 TLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK----VIR----HRVKKPAG-TAEEIEKHFG  271 (363)
Q Consensus       201 ~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~----~I~----~~~kKP~p-~~~~alk~lg  271 (363)
                      .++|++.++|+.|+ + |++++|+||.+        .......++.+|+.    .++    .+..||++ .|+.+++++|
T Consensus       109 ~~~~~~~~~L~~L~-~-~~~l~i~Tn~~--------~~~~~~~l~~~gl~~~fd~i~~s~~~~~~KP~p~~~~~~~~~~~  178 (247)
T d2gfha1         109 ILADDVKAMLTELR-K-EVRLLLLTNGD--------RQTQREKIEACACQSYFDAIVIGGEQKEEKPAPSIFYHCCDLLG  178 (247)
T ss_dssp             CCCHHHHHHHHHHH-T-TSEEEEEECSC--------HHHHHHHHHHHTCGGGCSEEEEGGGSSSCTTCHHHHHHHHHHHT
T ss_pred             ccCccHHHHHHHhh-c-ccceEEeeccc--------chhhhhhhhhccccccccccccccccccchhhhhhHHHHHHHhh
Confidence            35678889999997 4 78999999986        35667777888875    232    35679999 5799999999


Q ss_pred             CCCCcEEEEccCCcccHHHHHHcCCeEE-EEcCCC
Q 017982          272 CQSSQLIMVGDRPFTDIVYGNRNGFLTI-LTEPLS  305 (363)
Q Consensus       272 l~pee~vmVGDrL~TDI~~A~raGi~TI-lV~p~~  305 (363)
                      ++|++++||||++.+||.+|+++||.++ |+.+..
T Consensus       179 ~~~~~~l~iGD~~~~Di~~A~~~G~~~~~~~~~~~  213 (247)
T d2gfha1         179 VQPGDCVMVGDTLETDIQGGLNAGLKATVWINKSG  213 (247)
T ss_dssp             CCGGGEEEEESCTTTHHHHHHHTTCSEEEEECTTC
T ss_pred             cCHHhcceeccChHhHHHHHHHcCCeEEEEECCCC
Confidence            9999999999999889999999999865 454433

>d1zd3a1 c.108.1.2 (A:2-224) Epoxide hydrolase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: YihX-like
domain: Epoxide hydrolase, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.56  E-value=1.1e-14  Score=124.83  Aligned_cols=96  Identities=14%  Similarity=0.132  Sum_probs=72.8

Q ss_pred             cchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhC----CeEEE----cccCCCch-hHHHHHHHhCC
Q 017982          202 LWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIG----IKVIR----HRVKKPAG-TAEEIEKHFGC  272 (363)
Q Consensus       202 ~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LG----i~~I~----~~~kKP~p-~~~~alk~lgl  272 (363)
                      ++|++.++|.+|+ ..|++++|+||......    ...........+    .+.+.    .+.+||++ .|+.+++.+|+
T Consensus       100 ~~~~~~~~l~~L~-~~~~~~~i~Tn~~~~~~----~~~~~~~~~~~~~~~~fd~i~~s~~~~~~KP~~~~~~~~~~~~~~  174 (225)
T d1zd3a1         100 INRPMLQAALMLR-KKGFTTAILTNTWLDDR----AERDGLAQLMCELKMHFDFLIESCQVGMVKPEPQIYKFLLDTLKA  174 (225)
T ss_dssp             ECHHHHHHHHHHH-HTTCEEEEEECCCCCCS----TTHHHHHHHHHHHHTTSSEEEEHHHHTCCTTCHHHHHHHHHHHTC
T ss_pred             CCccHHHHHHHHH-hccCccccccccchhhH----HHHHHHHhhhcChHhhccEEEeccccccchhHHHHHHHHhhhccc
Confidence            4677889999998 57999999999864221    112222222222    23332    35789999 57999999999


Q ss_pred             CCCcEEEEccCCcccHHHHHHcCCeEEEEcC
Q 017982          273 QSSQLIMVGDRPFTDIVYGNRNGFLTILTEP  303 (363)
Q Consensus       273 ~pee~vmVGDrL~TDI~~A~raGi~TIlV~p  303 (363)
                      +|++++||||+. +||.+|+++||.||||.+
T Consensus       175 ~p~e~l~VgD~~-~Di~~A~~~G~~ti~v~~  204 (225)
T d1zd3a1         175 SPSEVVFLDDIG-ANLKPARDLGMVTILVQD  204 (225)
T ss_dssp             CGGGEEEEESCH-HHHHHHHHTTCEEEECSS
T ss_pred             CccceeEEecCH-HHHHHHHHcCCEEEEECC
Confidence            999999999996 899999999999999975

>d2hsza1 c.108.1.6 (A:1-224) Phosphoglycolate phosphatase Gph {Haemophilus somnus [TaxId: 731]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Phosphoglycolate phosphatase Gph
species: Haemophilus somnus [TaxId: 731]

Probab=99.56  E-value=7.9e-15  Score=127.28  Aligned_cols=94  Identities=21%  Similarity=0.250  Sum_probs=80.3

Q ss_pred             cchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCe----EEE----cccCCCch-hHHHHHHHhCC
Q 017982          202 LWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK----VIR----HRVKKPAG-TAEEIEKHFGC  272 (363)
Q Consensus       202 ~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~----~I~----~~~kKP~p-~~~~alk~lgl  272 (363)
                      ++|++.+.|..|+ +.|++++|+||+.        ...++.+++.+|+.    .+.    .+..||.| .+..+++++++
T Consensus        96 l~~~~~~~L~~L~-~~g~~~~i~tn~~--------~~~~~~~l~~~gl~~~f~~~~~~~~~~~~kp~p~~~~~~~~~~~~  166 (224)
T d2hsza1          96 LYPNVKETLEALK-AQGYILAVVTNKP--------TKHVQPILTAFGIDHLFSEMLGGQSLPEIKPHPAPFYYLCGKFGL  166 (224)
T ss_dssp             ECTTHHHHHHHHH-HTTCEEEEECSSC--------HHHHHHHHHHTTCGGGCSEEECTTTSSSCTTSSHHHHHHHHHHTC
T ss_pred             hHHHHHHHHHHHh-ccCCccccccccc--------HHHHHHHHHhcCchhhccccccccccccccccchhhHHHHHHhhh
Confidence            5689999999998 5799999999996        36678889999986    222    35678988 57899999999


Q ss_pred             CCCcEEEEccCCcccHHHHHHcCCeEEEEcCCC
Q 017982          273 QSSQLIMVGDRPFTDIVYGNRNGFLTILTEPLS  305 (363)
Q Consensus       273 ~pee~vmVGDrL~TDI~~A~raGi~TIlV~p~~  305 (363)
                      ++++++||||+. .||.+|+++|+.+|||..+.
T Consensus       167 ~~~~~~~igD~~-~Di~~A~~aG~~~i~v~~g~  198 (224)
T d2hsza1         167 YPKQILFVGDSQ-NDIFAAHSAGCAVVGLTYGY  198 (224)
T ss_dssp             CGGGEEEEESSH-HHHHHHHHHTCEEEEESSSC
T ss_pred             hhhccchhcCcH-HHHHHHHHcCCeEEEEeCCC
Confidence            999999999997 79999999999999998543

>d1swva_ c.108.1.3 (A:) Phosphonoacetaldehyde hydrolase {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Phosphonoacetaldehyde hydrolase-like
domain: Phosphonoacetaldehyde hydrolase
species: Bacillus cereus [TaxId: 1396]

Probab=99.55  E-value=5.8e-15  Score=132.42  Aligned_cols=95  Identities=15%  Similarity=0.149  Sum_probs=77.8

Q ss_pred             CcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCe-----EEE----cccCCCch-hHHHHHHHh
Q 017982          201 TLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK-----VIR----HRVKKPAG-TAEEIEKHF  270 (363)
Q Consensus       201 ~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~-----~I~----~~~kKP~p-~~~~alk~l  270 (363)
                      .++|++.+.|+.|+ +.|++++|+||++        ...+..+++.+|+.     ++.    ....||+| .+..+++++
T Consensus        99 ~~~~g~~~~L~~Lk-~~g~~i~i~Tn~~--------~~~~~~~l~~~~l~~~f~d~~~~~d~~~~~KP~p~~~~~~~~~l  169 (257)
T d1swva_          99 SPINGVKEVIASLR-ERGIKIGSTTGYT--------REMMDIVAKEAALQGYKPDFLVTPDDVPAGRPYPWMCYKNAMEL  169 (257)
T ss_dssp             CBCTTHHHHHHHHH-HTTCEEEEBCSSC--------HHHHHHHHHHHHHTTCCCSCCBCGGGSSCCTTSSHHHHHHHHHH
T ss_pred             ccCCcHHHHHHHHH-hcccceeecCCCc--------hhhHHHHHHHHhhcccccccccccccccccccChHHHHHHHHHh
Confidence            46788888999998 5799999999996        35666777776653     222    24579999 579999999


Q ss_pred             CCC-CCcEEEEccCCcccHHHHHHcCCeEEEEcCCC
Q 017982          271 GCQ-SSQLIMVGDRPFTDIVYGNRNGFLTILTEPLS  305 (363)
Q Consensus       271 gl~-pee~vmVGDrL~TDI~~A~raGi~TIlV~p~~  305 (363)
                      |+. +++|+||||+. .||.+|+++||.||+|..+.
T Consensus       170 ~~~p~~~~v~VgDs~-~Di~aA~~aG~~ti~v~~G~  204 (257)
T d1swva_         170 GVYPMNHMIKVGDTV-SDMKEGRNAGMWTVGVILGS  204 (257)
T ss_dssp             TCCSGGGEEEEESSH-HHHHHHHHTTSEEEEECTTC
T ss_pred             CCCCcceEEEEeCCh-hhHHHHHHCCCEEEEEccCC
Confidence            995 58999999998 79999999999999998765

>d1qq5a_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Xanthobacter autotrophicus [TaxId: 280]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: HAD-related
domain: L-2-Haloacid dehalogenase, HAD
species: Xanthobacter autotrophicus [TaxId: 280]

Probab=99.54  E-value=1.9e-14  Score=126.77  Aligned_cols=93  Identities=20%  Similarity=0.273  Sum_probs=75.0

Q ss_pred             CcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCe----EEE----cccCCCch-hHHHHHHHhC
Q 017982          201 TLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK----VIR----HRVKKPAG-TAEEIEKHFG  271 (363)
Q Consensus       201 ~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~----~I~----~~~kKP~p-~~~~alk~lg  271 (363)
                      ..+|++.+.|++|+   |+.++|+||+.        ...+..+.+.+|+.    .++    .+..||+| .|+.+++++|
T Consensus        93 ~~~~~~~~~L~~l~---~~~~~v~s~~~--------~~~~~~~~~~~~~~~~fd~v~~s~~~~~~KP~p~~f~~a~~~lg  161 (245)
T d1qq5a_          93 TPYPDAAQCLAELA---PLKRAILSNGA--------PDMLQALVANAGLTDSFDAVISVDAKRVFKPHPDSYALVEEVLG  161 (245)
T ss_dssp             CBCTTHHHHHHHHT---TSEEEEEESSC--------HHHHHHHHHHTTCGGGCSEEEEGGGGTCCTTSHHHHHHHHHHHC
T ss_pred             ccchhhhHHHHHHh---hhceeEEeccc--------hHHHHHHHhhcccccccccccccccccccCccHHHHHHHHHHhC
Confidence            45677777776664   67899999996        35567777777765    232    35679999 6799999999


Q ss_pred             CCCCcEEEEccCCcccHHHHHHcCCeEEEEcCCC
Q 017982          272 CQSSQLIMVGDRPFTDIVYGNRNGFLTILTEPLS  305 (363)
Q Consensus       272 l~pee~vmVGDrL~TDI~~A~raGi~TIlV~p~~  305 (363)
                      ++|++|+||||+. .||.+|+++||.||||....
T Consensus       162 ~~p~e~l~VgD~~-~di~~A~~aG~~tv~v~r~~  194 (245)
T d1qq5a_         162 VTPAEVLFVSSNG-FDVGGAKNFGFSVARVARLS  194 (245)
T ss_dssp             CCGGGEEEEESCH-HHHHHHHHHTCEEEEECCSC
T ss_pred             CChhhEEEEeCCH-HHHHHHHHcCCeEEEEcCCC
Confidence            9999999999997 79999999999999997443

>d1o08a_ c.108.1.6 (A:) beta-Phosphoglucomutase {Lactococcus lactis [TaxId: 1358]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: beta-Phosphoglucomutase
species: Lactococcus lactis [TaxId: 1358]

Probab=99.53  E-value=6.2e-15  Score=128.81  Aligned_cols=91  Identities=19%  Similarity=0.153  Sum_probs=76.1

Q ss_pred             CcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCe----EEE----cccCCCch-hHHHHHHHhC
Q 017982          201 TLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK----VIR----HRVKKPAG-TAEEIEKHFG  271 (363)
Q Consensus       201 ~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~----~I~----~~~kKP~p-~~~~alk~lg  271 (363)
                      .++|++.+.|+.|+ ..|++++|+||+.          .....++.+|+.    .+.    .+.+||.+ .|+.+++++|
T Consensus        91 ~~~~g~~~~l~~l~-~~~~~i~i~s~~~----------~~~~~l~~~~l~~~f~~i~~~~~~~~~KP~~~~~~~~l~~~~  159 (221)
T d1o08a_          91 DVYPGILQLLKDLR-SNKIKIALASASK----------NGPFLLERMNLTGYFDAIADPAEVAASKPAPDIFIAAAHAVG  159 (221)
T ss_dssp             GBCTTHHHHHHHHH-HTTCEEEECCSCT----------THHHHHHHTTCGGGCSEECCTTTSSSCTTSTHHHHHHHHHTT
T ss_pred             cccCCceecccccc-ccccceEEEeecc----------hhhHHHHhhccccccccccccccccccccChHHHHHHHHHcC
Confidence            46889999999998 6899999999974          234566677765    222    24679999 5799999999


Q ss_pred             CCCCcEEEEccCCcccHHHHHHcCCeEEEEcC
Q 017982          272 CQSSQLIMVGDRPFTDIVYGNRNGFLTILTEP  303 (363)
Q Consensus       272 l~pee~vmVGDrL~TDI~~A~raGi~TIlV~p  303 (363)
                      ++|++|+||||+. .||.+|+++||.||+|..
T Consensus       160 i~~~~~l~VgD~~-~di~~A~~aG~~~i~v~~  190 (221)
T d1o08a_         160 VAPSESIGLEDSQ-AGIQAIKDSGALPIGVGR  190 (221)
T ss_dssp             CCGGGEEEEESSH-HHHHHHHHHTCEEEEESC
T ss_pred             CCCceEEEEecCH-HHHHHHHHcCCEEEEECC
Confidence            9999999999998 799999999999999974

>d2ah5a1 c.108.1.6 (A:1-210) predicted phosphatase SP0104 {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: predicted phosphatase SP0104
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=99.50  E-value=2.8e-14  Score=123.64  Aligned_cols=94  Identities=13%  Similarity=0.116  Sum_probs=77.6

Q ss_pred             cchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCe----EEE--cccCCCch-hHHHHHHHhCCCC
Q 017982          202 LWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK----VIR--HRVKKPAG-TAEEIEKHFGCQS  274 (363)
Q Consensus       202 ~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~----~I~--~~~kKP~p-~~~~alk~lgl~p  274 (363)
                      +++++.+.|+.++ .. ++++|+||+.        ...++.+++.+|+.    .+.  ...+||.| .+..+++++|++|
T Consensus        85 ~~~~~~~~l~~l~-~~-~~~~i~t~~~--------~~~~~~~l~~~gl~~~fd~v~~~~~~~~~~p~~~~~~~~~~~~~~  154 (210)
T d2ah5a1          85 LFPQIIDLLEELS-SS-YPLYITTTKD--------TSTAQDMAKNLEIHHFFDGIYGSSPEAPHKADVIHQALQTHQLAP  154 (210)
T ss_dssp             ECTTHHHHHHHHH-TT-SCEEEEEEEE--------HHHHHHHHHHTTCGGGCSEEEEECSSCCSHHHHHHHHHHHTTCCG
T ss_pred             chhHHHHHHhhhh-cc-cchhhccccc--------chhhhHHHHhhcccccccccccccccccccccccchhhhhhhccc
Confidence            5788889999987 34 4899999995        46778888998876    222  34567777 5789999999999


Q ss_pred             CcEEEEccCCcccHHHHHHcCCeEEEEcCCCC
Q 017982          275 SQLIMVGDRPFTDIVYGNRNGFLTILTEPLSL  306 (363)
Q Consensus       275 ee~vmVGDrL~TDI~~A~raGi~TIlV~p~~~  306 (363)
                      ++++||||+. +||.+|+++|+++|||..+..
T Consensus       155 ~~~v~VGDs~-~Di~aa~~aGi~~i~v~~g~~  185 (210)
T d2ah5a1         155 EQAIIIGDTK-FDMLGARETGIQKLAITWGFG  185 (210)
T ss_dssp             GGEEEEESSH-HHHHHHHHHTCEEEEESSSSS
T ss_pred             ccceeecCCH-HHHHHHHHcCCeEEEEcCCCC
Confidence            9999999997 799999999999999986543

>d2fi1a1 c.108.1.3 (A:4-190) Putative hydrolase SP0805 {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Phosphonoacetaldehyde hydrolase-like
domain: Putative hydrolase SP0805
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=99.49  E-value=5.8e-14  Score=121.11  Aligned_cols=91  Identities=22%  Similarity=0.268  Sum_probs=73.4

Q ss_pred             CCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCe----EEE----cccCCCch-hHHHHHHHh
Q 017982          200 LTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK----VIR----HRVKKPAG-TAEEIEKHF  270 (363)
Q Consensus       200 ~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~----~I~----~~~kKP~p-~~~~alk~l  270 (363)
                      ..++|++.+.|+.|+ +.|++++|+||+.         ..+..+++.+++.    .+.    ....||++ .++.+++++
T Consensus        78 ~~~~~gv~~~l~~l~-~~g~~~~i~Sn~~---------~~~~~~l~~~~l~~~fd~i~~~~~~~~~KP~p~~~~~~~~~~  147 (187)
T d2fi1a1          78 PILFEGVSDLLEDIS-NQGGRHFLVSHRN---------DQVLEILEKTSIAAYFTEVVTSSSGFKRKPNPESMLYLREKY  147 (187)
T ss_dssp             CCBCTTHHHHHHHHH-HTTCEEEEECSSC---------THHHHHHHHTTCGGGEEEEECGGGCCCCTTSCHHHHHHHHHT
T ss_pred             CcccchhHHHHHHHH-hhhccccccccCc---------cchhhhhhhhccccccccccccccccccCCCHHHHHHHHHHc
Confidence            346799999999998 5799999999985         2233456778875    232    24579998 578999998


Q ss_pred             CCCCCcEEEEccCCcccHHHHHHcCCeEEEEcC
Q 017982          271 GCQSSQLIMVGDRPFTDIVYGNRNGFLTILTEP  303 (363)
Q Consensus       271 gl~pee~vmVGDrL~TDI~~A~raGi~TIlV~p  303 (363)
                      ++  ++++||||+. .|+.+|+++|+.+|+|..
T Consensus       148 ~~--~~~l~vgDs~-~Di~aA~~aG~~~i~v~~  177 (187)
T d2fi1a1         148 QI--SSGLVIGDRP-IDIEAGQAAGLDTHLFTS  177 (187)
T ss_dssp             TC--SSEEEEESSH-HHHHHHHHTTCEEEECSC
T ss_pred             CC--CCeEEEeCCH-HHHHHHHHcCCEEEEECC
Confidence            86  5699999997 899999999999999974

>d1x42a1 c.108.1.1 (A:1-230) Hypothetical protein PH0459 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: HAD-related
domain: Hypothetical protein PH0459
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=99.45  E-value=2.2e-13  Score=120.22  Aligned_cols=97  Identities=21%  Similarity=0.236  Sum_probs=81.7

Q ss_pred             CcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCe----EEE----cccCCCch-hHHHHHHHhC
Q 017982          201 TLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK----VIR----HRVKKPAG-TAEEIEKHFG  271 (363)
Q Consensus       201 ~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~----~I~----~~~kKP~p-~~~~alk~lg  271 (363)
                      .++|++.++|+.|+ + |++++|+||++        ......+++.+|+.    .+.    .+..||++ .|..+++++|
T Consensus       100 ~~~p~~~~~L~~l~-~-~~~i~i~Sn~~--------~~~~~~~l~~~gl~~~fd~i~~s~~~~~~KP~~~~~~~~~~~l~  169 (230)
T d1x42a1         100 ELYPEVVEVLKSLK-G-KYHVGMITDSD--------TEYLMAHLDALGIKDLFDSITTSEEAGFFKPHPRIFELALKKAG  169 (230)
T ss_dssp             CBCTTHHHHHHHHB-T-TBEEEEEESSC--------HHHHHHHHHHHTCGGGCSEEEEHHHHTBCTTSHHHHHHHHHHHT
T ss_pred             cccccHHHHHHHhh-c-cCceeeeeccc--------cccchhhhcccccccccccccccccccccchhhHHHHHHHhhhc
Confidence            46899999999996 3 78999999986        35667788888875    232    25689998 5799999999


Q ss_pred             CCCCcEEEEccCCcccHHHHHHcCCeEEEEcCCCCC
Q 017982          272 CQSSQLIMVGDRPFTDIVYGNRNGFLTILTEPLSLA  307 (363)
Q Consensus       272 l~pee~vmVGDrL~TDI~~A~raGi~TIlV~p~~~~  307 (363)
                      ++|++++||||++..||.+|+++|+.||||.+...+
T Consensus       170 ~~p~~~l~vgD~~~~Di~~A~~~G~~~v~v~~~~~~  205 (230)
T d1x42a1         170 VKGEEAVYVGDNPVKDCGGSKNLGMTSILLDRKGEK  205 (230)
T ss_dssp             CCGGGEEEEESCTTTTHHHHHTTTCEEEEECTTSCC
T ss_pred             ccccccceeecCcHhHHHHHHHcCCEEEEECCCCCC
Confidence            999999999999878999999999999999865544

>d2fdra1 c.108.1.6 (A:3-224) Hypothetical protein Atu0790 {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Hypothetical protein Atu0790
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=99.44  E-value=1.8e-13  Score=119.38  Aligned_cols=92  Identities=18%  Similarity=0.190  Sum_probs=71.6

Q ss_pred             chhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCeE-----EE------cccCCCch-hHHHHHHHh
Q 017982          203 WGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKV-----IR------HRVKKPAG-TAEEIEKHF  270 (363)
Q Consensus       203 ~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~~-----I~------~~~kKP~p-~~~~alk~l  270 (363)
                      +|++.++|++    .+.+.+|+||+.        ...+..+++.+|+.-     ++      ....||.+ .+..+++++
T Consensus        87 ~~g~~~~L~~----l~~~~~i~t~~~--------~~~~~~~l~~~~l~~~f~~~~~~~~~~~~~~~KP~~~~~~~~~~~l  154 (222)
T d2fdra1          87 IDGVKFALSR----LTTPRCICSNSS--------SHRLDMMLTKVGLKPYFAPHIYSAKDLGADRVKPKPDIFLHGAAQF  154 (222)
T ss_dssp             CTTHHHHHHH----CCSCEEEEESSC--------HHHHHHHHHHTTCGGGTTTCEEEHHHHCTTCCTTSSHHHHHHHHHH
T ss_pred             hhhHHHHhhh----ccccceeeeecc--------hhhhhhhhcccccccccceeecccccccccccccCHHHHHHHHHhh
Confidence            4444444444    345788999996        466788888888751     22      13469998 578999999


Q ss_pred             CCCCCcEEEEccCCcccHHHHHHcCCeEEEEcCCCCC
Q 017982          271 GCQSSQLIMVGDRPFTDIVYGNRNGFLTILTEPLSLA  307 (363)
Q Consensus       271 gl~pee~vmVGDrL~TDI~~A~raGi~TIlV~p~~~~  307 (363)
                      |++|++++||||+. .||.+|+++||.+|+|..+...
T Consensus       155 ~~~p~~~l~vgDs~-~dv~aA~~aG~~~i~v~~~~~~  190 (222)
T d2fdra1         155 GVSPDRVVVVEDSV-HGIHGARAAGMRVIGFTGASHT  190 (222)
T ss_dssp             TCCGGGEEEEESSH-HHHHHHHHTTCEEEEECCSTTC
T ss_pred             CCCCceEEEEcCCH-HHHHHHHHcCCEEEEEccCCCC
Confidence            99999999999998 7999999999999999876544

>d1cr6a1 c.108.1.2 (A:4-225) Epoxide hydrolase, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: YihX-like
domain: Epoxide hydrolase, N-terminal domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.37  E-value=9.1e-13  Score=114.09  Aligned_cols=100  Identities=11%  Similarity=0.108  Sum_probs=77.5

Q ss_pred             CCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCC----eEEE----cccCCCch-hHHHHHHHh
Q 017982          200 LTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGI----KVIR----HRVKKPAG-TAEEIEKHF  270 (363)
Q Consensus       200 ~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi----~~I~----~~~kKP~p-~~~~alk~l  270 (363)
                      ..++|++.+.|.+|+ +.|++++|+||+.....    ..........+|+    +.+.    .+.+||++ .|..+++++
T Consensus        96 ~~~~~~~~~~L~~L~-~~~~~~~i~s~~~~~~~----~~~~~~~~~~~~l~~~fd~i~~s~~~~~~KP~p~~~~~~~~~~  170 (222)
T d1cr6a1          96 RSINRPMLQAAIALK-KKGFTTCIVTNNWLDDG----DKRDSLAQMMCELSQHFDFLIESCQVGMIKPEPQIYNFLLDTL  170 (222)
T ss_dssp             CEECHHHHHHHHHHH-HTTCEEEEEECCCCCCS----SSHHHHHHHHHHHGGGCSEEEEHHHHSCCTTCHHHHHHHHHHH
T ss_pred             CCCCccHHHHHHHHH-hcCCceEEeeccccccH----HHHHHHHHHhcChHhhhceeeehhhccCCCCChHHHHHHHHHh
Confidence            457899999999998 68999999999864221    1223333334443    3332    35689999 679999999


Q ss_pred             CCCCCcEEEEccCCcccHHHHHHcCCeEEEEcCCC
Q 017982          271 GCQSSQLIMVGDRPFTDIVYGNRNGFLTILTEPLS  305 (363)
Q Consensus       271 gl~pee~vmVGDrL~TDI~~A~raGi~TIlV~p~~  305 (363)
                      +++|++|+||||+. +||.+|+++||.||+|....
T Consensus       171 ~v~p~~~l~IgD~~-~Di~~A~~aG~~ti~V~~~~  204 (222)
T d1cr6a1         171 KAKPNEVVFLDDFG-SNLKPARDMGMVTILVHNTA  204 (222)
T ss_dssp             TSCTTSEEEEESSS-TTTHHHHHHTCEEEECCSSS
T ss_pred             CCCcceEEEEECCH-HHHHHHHHcCCEEEEECCcc
Confidence            99999999999997 89999999999999997544

>d1yj5a1 c.108.1.9 (A:144-338) 5' polynucleotide kinase-3' phosphatase, middle domain {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: phosphatase domain of polynucleotide kinase
domain: 5' polynucleotide kinase-3' phosphatase, middle domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.27  E-value=3.4e-12  Score=114.40  Aligned_cols=117  Identities=18%  Similarity=0.276  Sum_probs=87.8

Q ss_pred             CCCEEEEcCCceeecC----------CCCC-cchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCc----cHHHHHHHHHH
Q 017982          182 GFKGVVFDKDNTLTAP----------YSLT-LWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDN----DASKARKLEGK  246 (363)
Q Consensus       182 GIkaVV~DlDnTL~~~----------~~~~-~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp----~~~~a~~i~~~  246 (363)
                      .-|+++||+|+||+-.          ..+. ++|++.++|+.|. ..|+.++||||++|....--    .......+.+.
T Consensus        20 ~~Kia~fDrDGtLik~~~~~~~~~~~~d~~~l~~~v~~~i~~L~-~~gy~iiIvTNQ~gI~rg~~s~~~~~~~~~~i~~~   98 (195)
T d1yj5a1          20 QGKVAAFDLDGTLITTRSGKVFPTSPSDWRILYPEIPKKLQELA-AEGYKLVIFTNQMGIGRGKLPAEVFKGKVEAVLEK   98 (195)
T ss_dssp             CSCEEEECSBTTTEECSSSCSSCSSTTCCEESCTTHHHHHHHHH-HHTCEEEEEEECHHHHHTSSCHHHHHHHHHHHHHH
T ss_pred             cCcEEEEECCCceEeeCCCCcCCCChhhceeccCCHHHHHHHHH-hCCcEEEEecCcchhccCCcCHHHHHHHHHHHHHH
Confidence            4588999999999631          1222 4799999999998 56999999999975432111    12345677888


Q ss_pred             hCCeE-EE-----cccCCCchhH-HHHHHHhC----CCCCcEEEEccCC----------------cccHHHHHHcCCeEE
Q 017982          247 IGIKV-IR-----HRVKKPAGTA-EEIEKHFG----CQSSQLIMVGDRP----------------FTDIVYGNRNGFLTI  299 (363)
Q Consensus       247 LGi~~-I~-----~~~kKP~p~~-~~alk~lg----l~pee~vmVGDrL----------------~TDI~~A~raGi~TI  299 (363)
                      ++++. ++     ..++||.++| ..++++++    ++.++++||||+.                .+|+++|.++|+...
T Consensus        99 l~~~~~i~~~~~~~~~RKP~~GM~~~~~~~~n~~~~id~~~S~~IGD~~gr~~~~~~~~~~~D~S~sD~~fA~N~gikF~  178 (195)
T d1yj5a1          99 LGVPFQVLVATHAGLNRKPVSGMWDHLQEQANEGIPISVEDSVFVGDAAGRLANWAPGRKKKDFSCADRLFALNVGLPFA  178 (195)
T ss_dssp             HTSCCEEEEECSSSSSSTTSTHHHHHHHHTSSSSCCCCGGGCEEECSCCCBCTTSBTTBCSCCSCCHHHHHHHHHTCCEE
T ss_pred             cCCCccEEEecCccccCCCccHHHHHHHHHhcccccCCcCceEEEeCccCccccccccccccCcchhHHHHHHHCCCccc
Confidence            88873 22     2479999976 78888874    8899999999964                489999999999843

>d1ltqa1 c.108.1.9 (A:153-301) Polynucleotide kinase, phosphatase domain {Bacteriophage T4 [TaxId: 10665]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: phosphatase domain of polynucleotide kinase
domain: Polynucleotide kinase, phosphatase domain
species: Bacteriophage T4 [TaxId: 10665]

Probab=99.26  E-value=1.2e-11  Score=102.29  Aligned_cols=119  Identities=19%  Similarity=0.144  Sum_probs=80.1

Q ss_pred             CCEEEEcCCceeecC-----C------CCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHH----HHHHHh
Q 017982          183 FKGVVFDKDNTLTAP-----Y------SLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKAR----KLEGKI  247 (363)
Q Consensus       183 IkaVV~DlDnTL~~~-----~------~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~----~i~~~L  247 (363)
                      -++|+||+|+||+..     +      ...++|++.+.|+.|+ +.|++|+|+||.+..+... ......    .+....
T Consensus         7 pk~vifDiDgTL~~~~~~~~~~~~~~~~~~~~p~v~~~l~~l~-~~G~~Iii~T~R~~~~~~~-t~~~l~~~~~~~~~~~   84 (149)
T d1ltqa1           7 PKAVIFDVDGTLAKMNGRGPYDLEKCDTDVINPMVVELSKMYA-LMGYQIVVVSGRESGTKED-PTKYYRMTRKWVEDIA   84 (149)
T ss_dssp             CEEEEEETBTTTBCCSSCCTTCGGGGGGCCBCHHHHHHHHHHH-HTTCEEEEEECSCCCCSSS-TTHHHHHHHHHHHHTT
T ss_pred             CcEEEEEcCCCcEeCCCCCcCCccccccCccCHHHHHHHHHHH-hccCeEEEEecCcHHHHHH-HHHHHHHHhhhhhhcC
Confidence            368999999999641     1      2357899999999998 5899999999997543211 111111    111222


Q ss_pred             CCeE--EE---cccCCCch-hHHHHHHHhCCCCCcE-EEEccCCcccHHHHHHcCCeEEEEcCC
Q 017982          248 GIKV--IR---HRVKKPAG-TAEEIEKHFGCQSSQL-IMVGDRPFTDIVYGNRNGFLTILTEPL  304 (363)
Q Consensus       248 Gi~~--I~---~~~kKP~p-~~~~alk~lgl~pee~-vmVGDrL~TDI~~A~raGi~TIlV~p~  304 (363)
                      +.++  +.   ....+|.. ....++..+..++.++ +||||+. +||++|+++|+.++.|.++
T Consensus        85 ~~~~~~~~~~~~~~~~~d~~~k~~~l~~~~~~~~~i~~~igD~~-~dv~a~~~~Gi~~~~V~~G  147 (149)
T d1ltqa1          85 GVPLVMQCQREQGDTRKDDVVKEEIFWKHIAPHFDVKLAIDDRT-QVVEMWRRIGVECWQVASG  147 (149)
T ss_dssp             CCCCSEEEECCTTCCSCHHHHHHHHHHHHTTTTCEEEEEEECCH-HHHHHHHHTTCCEEECSCC
T ss_pred             CCcEEEeecccccccCCchHHHHHHHHHhccCCCceEEEEcCCH-HHHHHHHHCCCcEEEeCCC
Confidence            3332  11   12223443 3356777777766665 6789999 8999999999999999876

>d2b0ca1 c.108.1.2 (A:8-204) Putative phosphatase YihX {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: YihX-like
domain: Putative phosphatase YihX
species: Escherichia coli [TaxId: 562]

Probab=99.24  E-value=5.2e-12  Score=105.14  Aligned_cols=102  Identities=17%  Similarity=0.220  Sum_probs=74.6

Q ss_pred             CcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCeEEE---cccCCCch-hHHHHHHHhCCCCCc
Q 017982          201 TLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKVIR---HRVKKPAG-TAEEIEKHFGCQSSQ  276 (363)
Q Consensus       201 ~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~~I~---~~~kKP~p-~~~~alk~lgl~pee  276 (363)
                      .+++++.+.+..++ ..|+.++|+||+..... .........+...+.. ++.   .+..||.+ .++.+++++|++|++
T Consensus        84 ~~~~~~~~l~~~l~-~~~~~~~i~t~~~~~~~-~~~~~~~~~l~~~fd~-v~~s~~~~~~Kp~~~~~~~~~~~~~~~~~~  160 (197)
T d2b0ca1          84 ALRPEVIAIMHKLR-EQGHRVVVLSNTNRLHT-TFWPEEYPEIRDAADH-IYLSQDLGMRKPEARIYQHVLQAEGFSPSD  160 (197)
T ss_dssp             EECHHHHHHHHHHH-HTTCEEEEEECCCCCTT-SCCGGGCHHHHHHCSE-EEEHHHHTCCTTCHHHHHHHHHHHTCCGGG
T ss_pred             ccCchhHHHHHHHH-hcCCeEEEEeCccHHHH-HHHHHHcccchhhccc-eeecccccccccchHHHHHHHHhcCCCCCe
Confidence            45788899998988 57999999999863221 0000111122222221 222   35689999 579999999999999


Q ss_pred             EEEEccCCcccHHHHHHcCCeEEEEcCCCC
Q 017982          277 LIMVGDRPFTDIVYGNRNGFLTILTEPLSL  306 (363)
Q Consensus       277 ~vmVGDrL~TDI~~A~raGi~TIlV~p~~~  306 (363)
                      |+||||+. +||.+|+++|+.||+|.+...
T Consensus       161 ~l~vgDs~-~di~~A~~aG~~ti~v~~~~~  189 (197)
T d2b0ca1         161 TVFFDDNA-DNIEGANQLGITSILVKDKTT  189 (197)
T ss_dssp             EEEEESCH-HHHHHHHTTTCEEEECCSTTH
T ss_pred             EEEEeCCH-HHHHHHHHcCCEEEEECCCCC
Confidence            99999998 899999999999999986654

>d2hcfa1 c.108.1.6 (A:2-229) Hypothetical protein CT1708 {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Hypothetical protein CT1708
species: Chlorobium tepidum [TaxId: 1097]

Probab=99.18  E-value=1.2e-11  Score=108.37  Aligned_cols=97  Identities=14%  Similarity=0.131  Sum_probs=75.5

Q ss_pred             CcchhHHHHHHHHHHhCC-CeEEEEeCCCCCCCCCccHHHHHHHHHHhCCe----EEE----cccCCCchh-HHHHHHHh
Q 017982          201 TLWGPLSSSIEQCKSVFG-HDIAVFSNSAGLYEYDNDASKARKLEGKIGIK----VIR----HRVKKPAGT-AEEIEKHF  270 (363)
Q Consensus       201 ~~~p~v~e~L~~Lk~~~G-ikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~----~I~----~~~kKP~p~-~~~alk~l  270 (363)
                      .++|++.++|+.|+ +.| ++++|+||+.        ...+..+++.+|+.    .+.    ...+||.+. +...+..+
T Consensus        91 ~~~~g~~~~L~~L~-~~g~~~~~v~t~~~--------~~~~~~~l~~~gl~~~fd~i~~~~~~~~~k~~p~~~~~~~~~~  161 (228)
T d2hcfa1          91 TLLEGVRELLDALS-SRSDVLLGLLTGNF--------EASGRHKLKLPGIDHYFPFGAFADDALDRNELPHIALERARRM  161 (228)
T ss_dssp             EECTTHHHHHHHHH-TCTTEEEEEECSSC--------HHHHHHHHHTTTCSTTCSCEECTTTCSSGGGHHHHHHHHHHHH
T ss_pred             eecCchHHHHhhhh-ccccccccccCCCc--------chhhhhhhhhhcccccccccccccccccccchhHHHHHHhhhh
Confidence            46899999999998 456 7999999996        36677888899985    232    235677763 34344444


Q ss_pred             ---CCCCCcEEEEccCCcccHHHHHHcCCeEEEEcCCCCC
Q 017982          271 ---GCQSSQLIMVGDRPFTDIVYGNRNGFLTILTEPLSLA  307 (363)
Q Consensus       271 ---gl~pee~vmVGDrL~TDI~~A~raGi~TIlV~p~~~~  307 (363)
                         +++|++++||||+. .||.+|+++||.+|+|..+...
T Consensus       162 ~~~~~~p~~~l~VGD~~-~Di~aA~~aG~~~i~v~~g~~~  200 (228)
T d2hcfa1         162 TGANYSPSQIVIIGDTE-HDIRCARELDARSIAVATGNFT  200 (228)
T ss_dssp             HCCCCCGGGEEEEESSH-HHHHHHHTTTCEEEEECCSSSC
T ss_pred             cccCCChhHheeecCCh-HHHHHHHHcCCEEEEEcCCCCC
Confidence               78999999999998 7999999999999999765433

>d2g80a1 c.108.1.22 (A:17-241) Protein UTR4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Enolase-phosphatase E1
domain: Protein UTR4
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.84  E-value=5.1e-09  Score=89.47  Aligned_cols=46  Identities=22%  Similarity=0.346  Sum_probs=43.4

Q ss_pred             cCCCch-hHHHHHHHhCCCCCcEEEEccCCcccHHHHHHcCCeEEEEc
Q 017982          256 VKKPAG-TAEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGFLTILTE  302 (363)
Q Consensus       256 ~kKP~p-~~~~alk~lgl~pee~vmVGDrL~TDI~~A~raGi~TIlV~  302 (363)
                      ..||++ +|..+++++|++|++|+||||+. .||.+|+++||.||||.
T Consensus       157 ~~KP~p~~f~~~~~~lg~~p~e~l~VgD~~-~Dv~~A~~aG~~ti~v~  203 (225)
T d2g80a1         157 GKKTETQSYANILRDIGAKASEVLFLSDNP-LELDAAAGVGIATGLAS  203 (225)
T ss_dssp             CCTTCHHHHHHHHHHHTCCGGGEEEEESCH-HHHHHHHTTTCEEEEEC
T ss_pred             CCCCChhHhHHHHHhcccCchhceeecCCH-HHHHHHHHcCCEEEEEe
Confidence            469999 67999999999999999999997 79999999999999997

>d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Hypothetical protein MW1667 (SA1546)
domain: Hypothetical protein MW1667 (SA1546)
species: Staphylococcus aureus [TaxId: 1280]

Probab=98.75  E-value=6.4e-09  Score=100.18  Aligned_cols=94  Identities=14%  Similarity=0.095  Sum_probs=76.3

Q ss_pred             cchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCeE------EE---------------cccCCCc
Q 017982          202 LWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKV------IR---------------HRVKKPA  260 (363)
Q Consensus       202 ~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~~------I~---------------~~~kKP~  260 (363)
                      +.|++.++|+.|+ +.|++++|+||..        ...++.+++.+|+.-      +.               ....||+
T Consensus       216 p~~~v~~~l~~lk-~aGi~v~i~Tg~~--------~~~a~~il~~lgl~~~F~~~~i~~~~d~~~~~~~~~~~~~~~KP~  286 (380)
T d1qyia_         216 PVDEVKVLLNDLK-GAGFELGIATGRP--------YTETVVPFENLGLLPYFEADFIATASDVLEAENMYPQARPLGKPN  286 (380)
T ss_dssp             CHHHHHHHHHHHH-HTTCEEEEECSSC--------HHHHHHHHHHHTCGGGSCGGGEECHHHHHHHHHHSTTSCCCCTTS
T ss_pred             chhhHHHHHHHHH-HCCCeEEEECCCC--------HHHHHHHHHHcCCcccCCcceEEecchhhhhhhhccccccccCCC
Confidence            4679999999998 6899999999996        477889999999841      21               1357999


Q ss_pred             h-hHHHHHHH--------------hCCCCCcEEEEccCCcccHHHHHHcCCeEEEEcCCC
Q 017982          261 G-TAEEIEKH--------------FGCQSSQLIMVGDRPFTDIVYGNRNGFLTILTEPLS  305 (363)
Q Consensus       261 p-~~~~alk~--------------lgl~pee~vmVGDrL~TDI~~A~raGi~TIlV~p~~  305 (363)
                      | .+..++..              ++.++++|+||||+. .|+.+|+++|+.+|+|..+.
T Consensus       287 p~~~~~~~~~~~~~~~~k~~iv~~~~~~~~~~~~vGD~~-~D~~aak~Ag~~~Igv~~G~  345 (380)
T d1qyia_         287 PFSYIAALYGNNRDKYESYINKQDNIVNKDDVFIVGDSL-ADLLSAQKIGATFIGTLTGL  345 (380)
T ss_dssp             THHHHHHHHCCCGGGHHHHHHCCTTCSCTTTEEEEESSH-HHHHHHHHHTCEEEEESCBT
T ss_pred             hHHHHHHHHHcCCCHHHHHHHHHHhCCCCCeEEEECCCH-HHHHHHHHCCCCEEEEecCC
Confidence            8 45666543              467889999999999 79999999999999998554

>d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Phosphoglycolate phosphatase, PGPase
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=98.69  E-value=1e-07  Score=81.63  Aligned_cols=116  Identities=16%  Similarity=0.286  Sum_probs=78.2

Q ss_pred             CCEEEEcCCceeecCCCCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCC------------C------------------
Q 017982          183 FKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLY------------E------------------  232 (363)
Q Consensus       183 IkaVV~DlDnTL~~~~~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~------------~------------------  232 (363)
                      +|++++|+|+||+. ....+.+.+.++|++|+ +.|+.++++|..+...            .                  
T Consensus         2 iK~i~~D~DGTL~~-~~~~i~~~~~~~l~~l~-~~gi~v~~~TGR~~~~~~~~~~~~~~~~~~i~~~g~~~~~~~~~~~~   79 (230)
T d1wr8a_           2 IKAISIDIDGTITY-PNRMIHEKALEAIRRAE-SLGIPIMLVTGNTVQFAEAASILIGTSGPVVAEDGGAISYKKKRIFL   79 (230)
T ss_dssp             CCEEEEESTTTTBC-TTSCBCHHHHHHHHHHH-HTTCCEEEECSSCHHHHHHHHHHHTCCSCEEEGGGTEEEETTEEEES
T ss_pred             ceEEEEecCCCCcC-CCCccCHHHHHHHHHHH-hCCCeEEEEeCCcHHHHHHHHHhcCCCcccccccceeeecccccccc
Confidence            78999999999985 45567899999999998 5799999999874100            0                  


Q ss_pred             --CCc-----------------------------------cHHHHHHHHHHhCCeEEE---------cccCCCch-hHHH
Q 017982          233 --YDN-----------------------------------DASKARKLEGKIGIKVIR---------HRVKKPAG-TAEE  265 (363)
Q Consensus       233 --~dp-----------------------------------~~~~a~~i~~~LGi~~I~---------~~~kKP~p-~~~~  265 (363)
                        .+.                                   ....++.+.+.++.....         .....+.+ .++.
T Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iei~~~~~~K~~al~~  159 (230)
T d1wr8a_          80 ASMDEEWILWNEIRKRFPNARTSYTMPDRRAGLVIMRETINVETVREIINELNLNLVAVDSGFAIHVKKPWINKGSGIEK  159 (230)
T ss_dssp             CCCSHHHHHHHHHHHHCTTCCBCTTGGGCSSCEEECTTTSCHHHHHHHHHHTTCSCEEEECSSCEEEECTTCCHHHHHHH
T ss_pred             ccccHHHHHHHHHHHhcccccceeecccceeeEEEecccccHHHHHHHHHHhccceEEeeCCcEEEEeeCCcCcchhhcc
Confidence              000                                   011122222222221110         01122223 4678


Q ss_pred             HHHHhCCCCCcEEEEccCCcccHHHHHHcCCeEEEEc
Q 017982          266 IEKHFGCQSSQLIMVGDRPFTDIVYGNRNGFLTILTE  302 (363)
Q Consensus       266 alk~lgl~pee~vmVGDrL~TDI~~A~raGi~TIlV~  302 (363)
                      +++++|++++++++|||.. +|+.+.+.+|+ +|.|.
T Consensus       160 l~~~~~i~~~~~~~iGD~~-NDi~ml~~ag~-~vav~  194 (230)
T d1wr8a_         160 ASEFLGIKPKEVAHVGDGE-NDLDAFKVVGY-KVAVA  194 (230)
T ss_dssp             HHHHHTSCGGGEEEEECSG-GGHHHHHHSSE-EEECT
T ss_pred             cccccccchhheeeeecCc-cHHHHHHHCCe-EEEEC
Confidence            8999999999999999998 89999999996 56653

>d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: MtnX-like
domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX
species: Bacillus subtilis [TaxId: 1423]

Probab=98.55  E-value=8.5e-08  Score=83.00  Aligned_cols=86  Identities=14%  Similarity=0.106  Sum_probs=68.6

Q ss_pred             CcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCe--EEE-------------------cccCCC
Q 017982          201 TLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK--VIR-------------------HRVKKP  259 (363)
Q Consensus       201 ~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~--~I~-------------------~~~kKP  259 (363)
                      .++|++.++++.|+ ..|++++|+||+.        ...++.+++.+|+.  ++.                   ....||
T Consensus        75 ~l~pg~~~~l~~L~-~~g~~~~ivS~~~--------~~~i~~~l~~l~~~~~~~an~~~~~~~~~~~~~~~~~~~~~~~~  145 (226)
T d2feaa1          75 KIREGFREFVAFIN-EHEIPFYVISGGM--------DFFVYPLLEGIVEKDRIYCNHASFDNDYIHIDWPHSCKGTCSNQ  145 (226)
T ss_dssp             CBCTTHHHHHHHHH-HHTCCEEEEEEEE--------HHHHHHHHTTTSCGGGEEEEEEECSSSBCEEECTTCCCTTCCSC
T ss_pred             chhHHHHHHHHHHH-hcccccccCCcch--------hhhHHHHHHHcCCccceeeeeEEEeCCcceeccccccccccccC
Confidence            46899999999998 5799999999985        46788888888764  111                   011233


Q ss_pred             ch-hHHHHHHHhCCCCCcEEEEccCCcccHHHHHHcCC
Q 017982          260 AG-TAEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGF  296 (363)
Q Consensus       260 ~p-~~~~alk~lgl~pee~vmVGDrL~TDI~~A~raGi  296 (363)
                      .+ ....+++.+++++++++||||+. +|+.+|++||+
T Consensus       146 k~~~~~~~~~~~~~~~~~~i~iGDs~-~Dl~~a~~A~~  182 (226)
T d2feaa1         146 CGCCKPSVIHELSEPNQYIIMIGDSV-TDVEAAKLSDL  182 (226)
T ss_dssp             CSSCHHHHHHHHCCTTCEEEEEECCG-GGHHHHHTCSE
T ss_pred             CHHHHHHHHHHhcCCCceEEEEeCch-hhHHHHHHCCE
Confidence            44 35788999999999999999998 89999999996

>d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Phosphoserine phosphatase
domain: Phosphoserine phosphatase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.49  E-value=1e-07  Score=83.94  Aligned_cols=92  Identities=14%  Similarity=0.117  Sum_probs=66.0

Q ss_pred             CcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCeE---EE-----------cccCCCch---h-
Q 017982          201 TLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKV---IR-----------HRVKKPAG---T-  262 (363)
Q Consensus       201 ~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~~---I~-----------~~~kKP~p---~-  262 (363)
                      .++|++.+.++.|+ +.|++++|+|++.        ...++.+++.+|++.   +.           .+..++.|   . 
T Consensus        82 ~l~pg~~~~i~~lk-~~G~~~~ivS~~~--------~~~v~~i~~~lgi~~~~v~an~~~~~~~G~~~g~~~~~p~~~~~  152 (217)
T d1nnla_          82 HLTPGIRELVSRLQ-ERNVQVFLISGGF--------RSIVEHVASKLNIPATNVFANRLKFYFNGEYAGFDETQPTAESG  152 (217)
T ss_dssp             CBCTTHHHHHHHHH-HTTCEEEEEEEEE--------HHHHHHHHHHTTCCGGGEEEECEEECTTSCEEEECTTSGGGSTT
T ss_pred             ccCHHHHHHHHHHH-hCCCEEEEECCCc--------hHHHHHHHHHhCCcccceeeeeeeeeehhccccceeeeeeeccc
Confidence            46799999999998 5899999999885        477899999999861   11           11122222   1 


Q ss_pred             H-HHHHHH--hCCCCCcEEEEccCCcccHHHHHHcCCeEEEEcC
Q 017982          263 A-EEIEKH--FGCQSSQLIMVGDRPFTDIVYGNRNGFLTILTEP  303 (363)
Q Consensus       263 ~-~~alk~--lgl~pee~vmVGDrL~TDI~~A~raGi~TIlV~p  303 (363)
                      - ..+++.  .+++++++++|||+. +|+.+++.+|+. |.+.+
T Consensus       153 ~K~~~v~~~~~~~~~~~~~~vGDs~-~Di~~~~~ag~~-va~~~  194 (217)
T d1nnla_         153 GKGKVIKLLKEKFHFKKIIMIGDGA-TDMEACPPADAF-IGFGG  194 (217)
T ss_dssp             HHHHHHHHHHHHHCCSCEEEEESSH-HHHTTTTTSSEE-EEECS
T ss_pred             hHHHHHHHHHhccCccccEEEEeCH-hhHHHHHhCCce-EEECC
Confidence            1 122222  246789999999999 899999999974 56654

>d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Phosphoglycolate phosphatase, PGPase
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=98.47  E-value=4.4e-07  Score=78.94  Aligned_cols=45  Identities=18%  Similarity=0.163  Sum_probs=38.5

Q ss_pred             CCCEEEEcCCceeecCCCCCcchhHHHHHHHHHHhCCCeEEEEeCCC
Q 017982          182 GFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSA  228 (363)
Q Consensus       182 GIkaVV~DlDnTL~~~~~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~  228 (363)
                      -+|.++||+|+||+. ....+.+++.++|++|+ +.|+.++++|...
T Consensus         2 miKli~~D~DGTL~~-~~~~i~~~~~~al~~l~-~~g~~v~~~TGr~   46 (225)
T d1l6ra_           2 MIRLAAIDVDGNLTD-RDRLISTKAIESIRSAE-KKGLTVSLLSGNV   46 (225)
T ss_dssp             CCCEEEEEHHHHSBC-TTSCBCHHHHHHHHHHH-HTTCEEEEECSSC
T ss_pred             CeEEEEEecCCCCcC-CCCcCCHHHHHHHHHHH-HCCCEEEEEcCCc
Confidence            378999999999985 45667899999999998 5799999999765

>d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Phosphoserine phosphatase
domain: Phosphoserine phosphatase
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=98.47  E-value=4.1e-07  Score=76.23  Aligned_cols=90  Identities=23%  Similarity=0.223  Sum_probs=65.7

Q ss_pred             cchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCeEEE----------------c--ccCCCch-h
Q 017982          202 LWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKVIR----------------H--RVKKPAG-T  262 (363)
Q Consensus       202 ~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~~I~----------------~--~~kKP~p-~  262 (363)
                      ..+++.+.++.+. ..|..++++|++.        ...+.......+...+.                .  ..+++.. .
T Consensus        76 ~~~~~~~~i~~l~-~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  146 (210)
T d1j97a_          76 PTEGAEETIKELK-NRGYVVAVVSGGF--------DIAVNKIKEKLGLDYAFANRLIVKDGKLTGDVEGEVLKENAKGEI  146 (210)
T ss_dssp             BCTTHHHHHHHHH-HTTCEEEEEEEEE--------HHHHHHHHHHHTCSEEEEEEEEEETTEEEEEEECSSCSTTHHHHH
T ss_pred             hhhhHHHHHHHHH-HcCCEEEeecccc--------cccccchhhccchhhhhhhhhccccccccccccccccccccccch
Confidence            4667778888887 5799999999884        35566666666665221                0  1122223 3


Q ss_pred             HHHHHHHhCCCCCcEEEEccCCcccHHHHHHcCCeEEEEc
Q 017982          263 AEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGFLTILTE  302 (363)
Q Consensus       263 ~~~alk~lgl~pee~vmVGDrL~TDI~~A~raGi~TIlV~  302 (363)
                      ...+++.++++++++++|||+. +|+.+++.+|+. |.++
T Consensus       147 ~~~~~~~~~~~~~~~i~iGDs~-nDi~m~~~ag~~-va~n  184 (210)
T d1j97a_         147 LEKIAKIEGINLEDTVAVGDGA-NDISMFKKAGLK-IAFC  184 (210)
T ss_dssp             HHHHHHHHTCCGGGEEEEESSG-GGHHHHHHCSEE-EEES
T ss_pred             hhhHHHHhcccccceEEecCCc-ChHHHHHHCCCC-EEEC
Confidence            4778889999999999999999 899999999975 4453

>d1k1ea_ c.108.1.5 (A:) Probable phosphatase YrbI {Haemophilus influenzae, HI1679 [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Probable phosphatase YrbI
domain: Probable phosphatase YrbI
species: Haemophilus influenzae, HI1679 [TaxId: 727]

Probab=98.37  E-value=5.4e-07  Score=78.37  Aligned_cols=105  Identities=22%  Similarity=0.205  Sum_probs=77.6

Q ss_pred             cCCCEEEEcCCceeecC---CCCC------cchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCeE
Q 017982          181 RGFKGVVFDKDNTLTAP---YSLT------LWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKV  251 (363)
Q Consensus       181 ~GIkaVV~DlDnTL~~~---~~~~------~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~~  251 (363)
                      ..||.+++|+|++|+.-   +...      ....=-..+..|+ ..|+.++|+|-..        ...+......+++..
T Consensus         3 ~~ik~~i~DvDGVlTDG~v~~~~dG~e~k~F~~~Dg~gi~~l~-~~gi~~~iis~~~--------~~~v~~~~~~l~~~~   73 (177)
T d1k1ea_           3 ENIKFVITDVDGVLTDGQLHYDANGEAIKSFHVRDGLGIKMLM-DADIQVAVLSGRD--------SPILRRRIADLGIKL   73 (177)
T ss_dssp             GGCCEEEEECTTTTSCSEEEEETTEEEEEEEEHHHHHHHHHHH-HTTCEEEEEESCC--------CHHHHHHHHHHTCCE
T ss_pred             ccCeEEEEccCCcccCCeEEEeCCCCEEEEEECcchHHHHHHh-hhcEEEEEecCCc--------hhHHHHHHhhhcccc
Confidence            47899999999998741   1110      1111123577787 5899999999775        256777788889887


Q ss_pred             EEcccCCCch-hHHHHHHHhCCCCCcEEEEccCCcccHHHHHHcCC
Q 017982          252 IRHRVKKPAG-TAEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGF  296 (363)
Q Consensus       252 I~~~~kKP~p-~~~~alk~lgl~pee~vmVGDrL~TDI~~A~raGi  296 (363)
                      ++.. .++.. .++.+++++++++++++||||.+ .|+.+-..+|+
T Consensus        74 ~~~~-~~~K~~~l~~~~~~~~i~~~~v~~vGDd~-nDl~~l~~~g~  117 (177)
T d1k1ea_          74 FFLG-KLEKETACFDLMKQAGVTAEQTAYIGDDS-VDLPAFAACGT  117 (177)
T ss_dssp             EEES-CSCHHHHHHHHHHHHTCCGGGEEEEECSG-GGHHHHHHSSE
T ss_pred             cccc-cccHHHHHHHHHHHhcCCcceeEEecCCc-cHHHHHhhCCe
Confidence            6533 23333 46789999999999999999999 79999999995

>d2b82a1 c.108.1.12 (A:4-212) Class B acid phosphatase, AphA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Class B acid phosphatase, AphA
domain: Class B acid phosphatase, AphA
species: Escherichia coli [TaxId: 562]

Probab=98.33  E-value=5.5e-07  Score=80.86  Aligned_cols=91  Identities=18%  Similarity=0.095  Sum_probs=65.2

Q ss_pred             cchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCeE------EEcccCCCch-hHHHHHHHhCCCC
Q 017982          202 LWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKV------IRHRVKKPAG-TAEEIEKHFGCQS  274 (363)
Q Consensus       202 ~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~~------I~~~~kKP~p-~~~~alk~lgl~p  274 (363)
                      +.|++.+++++++ +.|++|+.|||.+...    ....++.+.+.+|++.      ++ ...++.. .-...++++++  
T Consensus        87 p~pga~~fl~~~~-~~Gv~IfyVTnR~~~~----~e~T~~nL~K~lG~p~~~~~~vll-~~~~~~K~~rr~~Ik~y~I--  158 (209)
T d2b82a1          87 PKEVARQLIDMHV-RRGDAIFFVTGRSPTK----TETVSKTLADNFHIPATNMNPVIF-AGDKPGQNTKSQWLQDKNI--  158 (209)
T ss_dssp             ECHHHHHHHHHHH-HHTCEEEEEECSCCCS----SCCHHHHHHHHTTCCTTTBCCCEE-CCCCTTCCCSHHHHHHTTE--
T ss_pred             cchhHHHHHHHHH-HcCCeEEEEeCCchhh----HHHHHHHHHHHcCCCcccccceEe-eCCCCCchHHHHHHHHcCe--
Confidence            3568999999998 5799999999986321    1234455566788862      32 2233433 22445577776  


Q ss_pred             CcEEEEccCCcccHHHHHHcCCeEEEEcC
Q 017982          275 SQLIMVGDRPFTDIVYGNRNGFLTILTEP  303 (363)
Q Consensus       275 ee~vmVGDrL~TDI~~A~raGi~TIlV~p  303 (363)
                        ++|+||++ .|+.+|..+|++.|-|..
T Consensus       159 --~l~~GD~l-~Df~aA~eagi~~iRi~r  184 (209)
T d2b82a1         159 --RIFYGDSD-NDITAARDVGARGIRILR  184 (209)
T ss_dssp             --EEEEESSH-HHHHHHHHTTCEEEECCC
T ss_pred             --EEEecCCH-HHHhHHHHcCCCceEeec
Confidence              88999999 899999999999999853

>d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Hypothetical protein YwpJ
species: Bacillus subtilis [TaxId: 1423]

Probab=98.26  E-value=3e-06  Score=75.15  Aligned_cols=44  Identities=20%  Similarity=0.174  Sum_probs=37.5

Q ss_pred             CCEEEEcCCceeecCCCCCcchhHHHHHHHHHHhCCCeEEEEeCCC
Q 017982          183 FKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSA  228 (363)
Q Consensus       183 IkaVV~DlDnTL~~~~~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~  228 (363)
                      ||.|++|+|+||.. ....+.+.+.++|++|+ +.|+.++++|..+
T Consensus         1 iKli~~DlDGTLl~-~~~~i~~~~~~~l~~l~-~~Gi~~~i~TGR~   44 (285)
T d1nrwa_           1 MKLIAIDLDGTLLN-SKHQVSLENENALRQAQ-RDGIEVVVSTGRA   44 (285)
T ss_dssp             CCEEEEECCCCCSC-TTSCCCHHHHHHHHHHH-HTTCEEEEECSSC
T ss_pred             CeEEEEECCccccC-CCCccCHHHHHHHHHHH-HCCCEEEEECCCC
Confidence            68999999999986 44557899999999998 5799999999754

>d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Meta-cation ATPase, catalytic domain P
domain: Cation-transporting ATPase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=98.18  E-value=1.3e-05  Score=66.71  Aligned_cols=102  Identities=19%  Similarity=0.240  Sum_probs=80.2

Q ss_pred             CCEEEEcCCceeecCCCCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCeEEEcccCCCchh
Q 017982          183 FKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKVIRHRVKKPAGT  262 (363)
Q Consensus       183 IkaVV~DlDnTL~~~~~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~~I~~~~kKP~p~  262 (363)
                      +..+++|.+.+++......+-|++.+.++.|+ +.|+++.|+|.-.        ...++.+.+.+|++.++.. ..|...
T Consensus         3 ~~~~~~d~~~~~~~g~~D~lr~~a~~~I~~L~-~~Gi~v~ilTGD~--------~~~a~~ia~~lgI~~v~~~-~~p~~k   72 (135)
T d2b8ea1           3 VTAVIFDKTGTLTKGKPDTLKESAKPAVQELK-RMGIKVGMITGDN--------WRSAEAISRELNLDLVIAE-VLPHQK   72 (135)
T ss_dssp             CCEEEEECCCCCBCSCCCCBCTTHHHHHHHHH-HTTCEEEEECSSC--------HHHHHHHHHHHTCSEEECS-CCHHHH
T ss_pred             EEEEEECCceEEEEecCCCCCccHHHHHHHHH-HcCCEEEEEcCcc--------hhhhhHHHhhhhhhhhccc-cchhHH
Confidence            57899999999988777788999999999998 6899999999553        4778899999999977533 344432


Q ss_pred             HHHHHHHhCCCCCcEEEEccCCcccHHHHHHcCCe
Q 017982          263 AEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGFL  297 (363)
Q Consensus       263 ~~~alk~lgl~pee~vmVGDrL~TDI~~A~raGi~  297 (363)
                      . .+++.+.- .+.++||||.+ .|+.+-+.+++.
T Consensus        73 ~-~~v~~~q~-~~~v~~vGDg~-nD~~aL~~Advg  104 (135)
T d2b8ea1          73 S-EEVKKLQA-KEVVAFVGDGI-NDAPALAQADLG  104 (135)
T ss_dssp             H-HHHHHHTT-TSCEEEEECSS-SSHHHHHHSSEE
T ss_pred             H-HHHHHHHc-CCEEEEEeCCC-CcHHHHHhCCee
Confidence            2 33444443 36899999999 899999998864

>d1rlma_ c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Sugar phosphatase SupH (YbiV)
species: Escherichia coli [TaxId: 562]

Probab=98.06  E-value=7.5e-06  Score=72.19  Aligned_cols=45  Identities=20%  Similarity=0.100  Sum_probs=36.8

Q ss_pred             CCEEEEcCCceeecCCCCCcchhHHHHHHHHHHhCCCeEEEEeCCC
Q 017982          183 FKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSA  228 (363)
Q Consensus       183 IkaVV~DlDnTL~~~~~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~  228 (363)
                      ||.+++|+|+||.........|.+.++|++|+ +.|+.++|+|...
T Consensus         2 IKli~~DlDGTLl~~~~~~~~~~~~~~l~~l~-~~gi~~~i~TGR~   46 (269)
T d1rlma_           2 VKVIVTDMDGTFLNDAKTYNQPRFMAQYQELK-KRGIKFVVASGNQ   46 (269)
T ss_dssp             CCEEEECCCCCCSCTTSCCCHHHHHHHHHHHH-HHTCEEEEECSSC
T ss_pred             EEEEEEeCCccCcCCCCcCChHHHHHHHHHHH-HCCCEEEEEcCCC
Confidence            78999999999976444444578999999998 4699999999754

>d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Hypothetical protein YidA
species: Escherichia coli [TaxId: 562]

Probab=98.02  E-value=1.9e-05  Score=69.42  Aligned_cols=46  Identities=17%  Similarity=0.221  Sum_probs=38.7

Q ss_pred             cCCCEEEEcCCceeecCCCCCcchhHHHHHHHHHHhCCCeEEEEeCCC
Q 017982          181 RGFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSA  228 (363)
Q Consensus       181 ~GIkaVV~DlDnTL~~~~~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~  228 (363)
                      +-||.+++|+|+||.. .+..+.+.+.++|++|+ +.|++++|+|...
T Consensus         2 ~~iKli~~DlDGTL~~-~~~~i~~~~~~al~~L~-~~gi~v~i~TGR~   47 (271)
T d1rkqa_           2 LAIKLIAIDMDGTLLL-PDHTISPAVKNAIAAAR-ARGVNVVLTTGRP   47 (271)
T ss_dssp             CCCCEEEECCCCCCSC-TTSCCCHHHHHHHHHHH-HTTCEEEEECSSC
T ss_pred             CCeeEEEEeCCccccC-CCCccCHHHHHHHHHHH-HCCCEEEEECCCC
Confidence            3589999999999975 44567899999999998 5799999999854

>d1xvia_ c.108.1.10 (A:) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP)
species: Escherichia coli [TaxId: 562]

Probab=97.93  E-value=1.9e-05  Score=66.93  Aligned_cols=42  Identities=19%  Similarity=0.181  Sum_probs=34.8

Q ss_pred             EEEEcCCceeecCCCCCcchhHHHHHHHHHHhCCCeEEEEeCCC
Q 017982          185 GVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSA  228 (363)
Q Consensus       185 aVV~DlDnTL~~~~~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~  228 (363)
                      .|++|+|+||.. ....+.+.+.++|++|+ +.|+.++++|..+
T Consensus         6 li~~DlDGTLl~-~~~~i~~~~~~al~~l~-~~Gi~~~i~TGR~   47 (232)
T d1xvia_           6 LVFSDLDGTLLD-SHSYDWQPAAPWLTRLR-EANVPVILCSSKT   47 (232)
T ss_dssp             EEEEECTTTTSC-SSCCSCCTTHHHHHHHH-HTTCCEEEECSSC
T ss_pred             EEEEECCCCccC-CcCcCCHHHHHHHHHHH-HCCCEEEEEeCCC
Confidence            467799999986 33457788999999998 5799999999875

>d1wzca1 c.108.1.10 (A:1-243) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP)
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=97.62  E-value=0.00021  Score=60.88  Aligned_cols=42  Identities=29%  Similarity=0.361  Sum_probs=34.5

Q ss_pred             CCEEEEcCCceeecCCCCCcchhHHHHHHHHHHhCCCeEEEEeCCC
Q 017982          183 FKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSA  228 (363)
Q Consensus       183 IkaVV~DlDnTL~~~~~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~  228 (363)
                      +|.+++|+|+||...+   ..+...++|++|+ +.|+.++++|..+
T Consensus         2 iKli~~DlDGTLl~~~---~~~~~~~ai~~l~-~~G~~~~~aTGR~   43 (243)
T d1wzca1           2 IRLIFLDIDKTLIPGY---EPDPAKPIIEELK-DMGFEIIFNSSKT   43 (243)
T ss_dssp             EEEEEECCBTTTBSSS---CSGGGHHHHHHHH-HTTEEEEEECSSC
T ss_pred             cEEEEEeCCCCCCCCC---CCHHHHHHHHHHH-HCCCEEEEEeCCC
Confidence            5889999999997432   2467889999998 5799999999885

>d2bdea1 c.108.1.23 (A:2-459) Cytosolic IMP-GMP specific 5'-nucleotidase {Legionella pneumophila [TaxId: 446]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: 5' nucleotidase-like
domain: Cytosolic IMP-GMP specific 5'-nucleotidase
species: Legionella pneumophila [TaxId: 446]

Probab=97.58  E-value=0.00012  Score=72.08  Aligned_cols=96  Identities=17%  Similarity=0.240  Sum_probs=67.9

Q ss_pred             chhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHH-h------CC------eEEEcccC------------
Q 017982          203 WGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGK-I------GI------KVIRHRVK------------  257 (363)
Q Consensus       203 ~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~-L------Gi------~~I~~~~k------------  257 (363)
                      -|++..||++|+ +.|.+++++||++-        ..+..++.. +      |-      ++|...++            
T Consensus       187 ~~~l~~~L~~lr-~~GKklFLiTNS~~--------~y~~~~m~y~~~~~~~~g~dWr~lFDvVIv~A~KP~FF~~~~~~~  257 (458)
T d2bdea1         187 EKEVVEGLKHFI-RYGKKIFILTNSEY--------SYSKLLLDYALSPFLDKGEHWQGLFEFVITLANKPRFFYDNLRFL  257 (458)
T ss_dssp             CHHHHHHHHHHH-TTTCEEEEECSSCH--------HHHHHHHHHHHGGGSCTTCCGGGTEEEEEESCCHHHHHHSCCCEE
T ss_pred             ChhHHHHHHHHH-HcCCeEEEEecCcH--------HHHHHHhhhhcccCCCCCCChHHhceEEEeCCCCCCccCCCCcce
Confidence            467888999999 68999999999972        333332222 2      21      12222222            


Q ss_pred             ----------------CCch----hHHHHHHHhCCCCCcEEEEccCCcccHHHHH-HcCCeEEEEcCCCCC
Q 017982          258 ----------------KPAG----TAEEIEKHFGCQSSQLIMVGDRPFTDIVYGN-RNGFLTILTEPLSLA  307 (363)
Q Consensus       258 ----------------KP~p----~~~~alk~lgl~pee~vmVGDrL~TDI~~A~-raGi~TIlV~p~~~~  307 (363)
                                      ||..    ......+.+|..-.++++|||.++.||..++ ..|.+|++|-|--..
T Consensus       258 ~v~~~~g~l~~~~~~~~~~vY~gGn~~~l~~llg~~g~~VLY~GDhi~~Di~~~kk~~gWrT~~Ii~ELe~  328 (458)
T d2bdea1         258 SVNPENGTMTNVHGPIVPGVYQGGNAKKFTEDLGVGGDEILYIGDHIYGDILRLKKDCNWRTALVVEELGE  328 (458)
T ss_dssp             EECTTTCCEEECCSCCCSEEEEECCHHHHHHHTTCCGGGEEEEESSCCSCHHHHHHHHCSEEEEECTTHHH
T ss_pred             EEeCCCCccccCCccccCCccccCCHHHHHHHhCCCCCcEEEECCccchhhhhhhhhcCCceEEehHHHHH
Confidence                            2321    1567888889998999999999999999986 579999999876533

>d1rkua_ c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Homoserine kinase ThrH
domain: Homoserine kinase ThrH
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=97.49  E-value=0.0002  Score=59.14  Aligned_cols=39  Identities=13%  Similarity=0.037  Sum_probs=33.4

Q ss_pred             HHHHHHHhCCCCCcEEEEccCCcccHHHHHHcCCeEEEEcC
Q 017982          263 AEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGFLTILTEP  303 (363)
Q Consensus       263 ~~~alk~lgl~pee~vmVGDrL~TDI~~A~raGi~TIlV~p  303 (363)
                      ....++.++++++++++|||.. +|+.+.+.||+... +++
T Consensus       134 ~~~~~~~~~i~~~eviaiGDg~-NDi~Ml~~Ag~gIA-mna  172 (206)
T d1rkua_         134 KRQSVIAFKSLYYRVIAAGDSY-NDTTMLSEAHAGIL-FHA  172 (206)
T ss_dssp             HHHHHHHHHHTTCEEEEEECSS-TTHHHHHHSSEEEE-ESC
T ss_pred             HHHHHHHhcccccceEEecCCc-cCHHHHHhCCccEE-ECC
Confidence            4678889999999999999999 89999999998644 453

>d2b30a1 c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmodium vivax [TaxId: 5855]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: PFL1270w orthologue
species: Plasmodium vivax [TaxId: 5855]

Probab=97.36  E-value=8.8e-05  Score=64.84  Aligned_cols=52  Identities=15%  Similarity=0.157  Sum_probs=44.1

Q ss_pred             HHHHHcCCCEEEEcCCceeecCCCCCcchhHHHHHHHHHHhCCCeEEEEeCCC
Q 017982          176 AELQRRGFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSA  228 (363)
Q Consensus       176 ~~L~~~GIkaVV~DlDnTL~~~~~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~  228 (363)
                      +.++.+.||.|++|+|+||.......+.+.+.++|++|+ +.|++++|+|..+
T Consensus         3 ~~~~~~~ikli~~DlDGTLl~~~~~~i~~~~~~al~~l~-~~Gi~v~i~TGR~   54 (283)
T d2b30a1           3 EALKGADIKLLLIDFDGTLFVDKDIKVPSENIDAIKEAI-EKGYMVSICTGRS   54 (283)
T ss_dssp             HHTTTCCCCEEEEETBTTTBCCTTTCSCHHHHHHHHHHH-HHTCEEEEECSSC
T ss_pred             ccCcccCccEEEEECCCCCcCCCCCcCCHHHHHHHHHHH-HCCCEEEEEcCCC
Confidence            356678999999999999975445668899999999998 5699999999985

>d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Meta-cation ATPase, catalytic domain P
domain: Calcium ATPase, catalytic domain P
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=97.04  E-value=0.00099  Score=56.65  Aligned_cols=103  Identities=19%  Similarity=0.174  Sum_probs=74.0

Q ss_pred             EEEEcCCceeecCCCCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCe--------------
Q 017982          185 GVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK--------------  250 (363)
Q Consensus       185 aVV~DlDnTL~~~~~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~--------------  250 (363)
                      ++.+|.+++++.-.-..+.+++.++++.|+ +.|+++.++|.-.        ...+..+.+.+|+.              
T Consensus         4 ~~~~d~~~~~~~~~~Dp~R~~~~~~I~~l~-~~GI~v~miTGD~--------~~tA~~ia~~~Gi~~~~~~v~~~~~~~~   74 (168)
T d1wpga2           4 VICSDKTGTLTTNQLDPPRKEVMGSIQLCR-DAGIRVIMITGDN--------KGTAIAICRRIGIFGENEEVADRAYTGR   74 (168)
T ss_dssp             EEEECCTTTTBCCCECCBCTTHHHHHHHHH-HTTCEEEEECSSC--------HHHHHHHHHHTTSSCTTCCCTTTEEEHH
T ss_pred             EEEECCccEEEEEecCCCchhHHHHHHHHH-HCcCEEEEECCCC--------HHHHHHHHHHcCCCCCcccccccccccc
Confidence            466799999876444567789999999998 6899999999775        36778888888873              


Q ss_pred             -----------------EEEcccCCCchh--HHHHHHHhCCCCCcEEEEccCCcccHHHHHHcCCeEEEEc
Q 017982          251 -----------------VIRHRVKKPAGT--AEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGFLTILTE  302 (363)
Q Consensus       251 -----------------~I~~~~kKP~p~--~~~alk~lgl~pee~vmVGDrL~TDI~~A~raGi~TIlV~  302 (363)
                                       -++ +.-.|...  +-+.++..|   ..++||||.. .|..+=+.+.+ .|.+.
T Consensus        75 ~~~~~~~~~~~~~~~~~~v~-ar~~p~~K~~lv~~l~~~g---~~Va~vGDG~-nD~~AL~~Adv-GIa~~  139 (168)
T d1wpga2          75 EFDDLPLAEQREACRRACCF-ARVEPSHKSKIVEYLQSYD---EITAMTGDGV-NDAPALKKAEI-GIAMG  139 (168)
T ss_dssp             HHHHSCHHHHHHHHHHCCEE-ESCCHHHHHHHHHHHHHTT---CCEEEEECSG-GGHHHHHHSSE-EEEET
T ss_pred             ccchhhHHHHhhhhhhhhhh-hccchhHHHHHHHHHHhcc---cceeEEecCC-CCHHHHHhCCE-EEEec
Confidence                             111 22345432  234444444   6899999998 89999998874 34443

>d1s2oa1 c.108.1.10 (A:1-244) Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Sucrose-phosphatase Slr0953
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=96.82  E-value=0.0015  Score=56.32  Aligned_cols=38  Identities=18%  Similarity=0.342  Sum_probs=32.5

Q ss_pred             hHHHHHHHhCCCCCcEEEEccCCcccHHHHHHcCCeEEEE
Q 017982          262 TAEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGFLTILT  301 (363)
Q Consensus       262 ~~~~alk~lgl~pee~vmVGDrL~TDI~~A~raGi~TIlV  301 (363)
                      +++.+++++|+++++++.|||+. +|+.+-+.+| .++.|
T Consensus       166 a~~~l~~~~gi~~~~~v~~GD~~-ND~~Ml~~~~-~~vav  203 (244)
T d1s2oa1         166 ATQYLQQHLAMEPSQTLVCGDSG-NDIGLFETSA-RGVIV  203 (244)
T ss_dssp             HHHHHHHHTTCCGGGEEEEECSG-GGHHHHTSSS-EEEEC
T ss_pred             HHHHHHHhccCChhhEEEEcCCC-CCHHHHhhCC-cEEEe
Confidence            35788999999999999999998 8999999888 44544

>d2rbka1 c.108.1.10 (A:2-261) Sugar-phosphate phosphatase BT4131 {Bacteroides thetaiotaomicron [TaxId: 818]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Sugar-phosphate phosphatase BT4131
species: Bacteroides thetaiotaomicron [TaxId: 818]

Probab=96.47  E-value=0.0014  Score=57.15  Aligned_cols=44  Identities=20%  Similarity=0.240  Sum_probs=37.6

Q ss_pred             CEEEEcCCceeecCCCCCcchhHHHHHHHHHHhCCCeEEEEeCCC
Q 017982          184 KGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSA  228 (363)
Q Consensus       184 kaVV~DlDnTL~~~~~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~  228 (363)
                      |+|++|+|+||..+....+.+...++|++|+ +.|+.++++|..+
T Consensus         2 k~if~DlDGTL~~~~~~~i~~~~~~al~~l~-~~gi~v~~~TGR~   45 (260)
T d2rbka1           2 KALFFDIDGTLVSFETHRIPSSTIEALEAAH-AKGLKIFIATGRP   45 (260)
T ss_dssp             CEEEECSBTTTBCTTTSSCCHHHHHHHHHHH-HTTCEEEEECSSC
T ss_pred             eEEEEECCCCCcCCCCCCCCHHHHHHHHHHH-HCCCEEEEECCCC
Confidence            7899999999986555667889999999998 5799999999754

>d2amya1 c.108.1.10 (A:4-246) Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Phosphomannomutase 2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.13  E-value=0.0021  Score=53.79  Aligned_cols=45  Identities=24%  Similarity=0.212  Sum_probs=37.5

Q ss_pred             cCCCEEEEcCCceeecCCCCCcchhHHHHHHHHHHhCCCeEEEEeCCC
Q 017982          181 RGFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSA  228 (363)
Q Consensus       181 ~GIkaVV~DlDnTL~~~~~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~  228 (363)
                      .|.|.++||+|+||.. ....+.+.+.++|++|+ +.| .++|+|...
T Consensus         1 ~~~kl~~fDlDGTLl~-~~~~i~~~~~~al~~l~-~~g-~~~i~Tgr~   45 (243)
T d2amya1           1 PGPALCLFDVDGTLTA-PRQKITKEMDDFLQKLR-QKI-KIGVVGGSD   45 (243)
T ss_dssp             CCSEEEEEESBTTTBC-TTSCCCHHHHHHHHHHT-TTS-EEEEECSSC
T ss_pred             CCCEEEEEcCcCCeeC-CCCcCCHHHHHHHHHHH-cCC-CEEEEcCCC
Confidence            3789999999999986 56678899999999997 556 688888764

>d1xpja_ c.108.1.18 (A:) Hypothetical protein VC0232 {Vibrio cholerae [TaxId: 666]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Hypothetical protein VC0232
domain: Hypothetical protein VC0232
species: Vibrio cholerae [TaxId: 666]

Probab=95.91  E-value=0.011  Score=47.98  Aligned_cols=45  Identities=18%  Similarity=0.274  Sum_probs=36.9

Q ss_pred             CCEEEEcCCceeecCC-----CCCcchhHHHHHHHHHHhCCCeEEEEeCCC
Q 017982          183 FKGVVFDKDNTLTAPY-----SLTLWGPLSSSIEQCKSVFGHDIAVFSNSA  228 (363)
Q Consensus       183 IkaVV~DlDnTL~~~~-----~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~  228 (363)
                      .+.++||+|+||+...     ...+.+++.+.++.|+ ..|+.++|.|...
T Consensus         1 mK~i~~DiDGTI~~~~~~~y~~~~P~~~~Ie~l~~l~-~~G~~Iii~TaR~   50 (124)
T d1xpja_           1 MKKLIVDLDGTLTQANTSDYRNVLPRLDVIEQLREYH-QLGFEIVISTARN   50 (124)
T ss_dssp             CCEEEECSTTTTBCCCCSCGGGCCBCHHHHHHHHHHH-HTTCEEEEEECTT
T ss_pred             CCEEEEeCCCCeECCCCCCcCccCcCHHHHHHHHHHH-HCCCEEEEEecCC
Confidence            3678999999997532     2357889999999998 5799999999885

>d1nf2a_ c.108.1.10 (A:) Hypothetical protein TM0651 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Hypothetical protein TM0651
species: Thermotoga maritima [TaxId: 2336]

Probab=95.47  E-value=0.011  Score=51.52  Aligned_cols=55  Identities=22%  Similarity=0.160  Sum_probs=40.9

Q ss_pred             CCEEEEcCCceeecCCCCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhC
Q 017982          183 FKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIG  248 (363)
Q Consensus       183 IkaVV~DlDnTL~~~~~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LG  248 (363)
                      +|.+++|+|+||.. ....+.+.+.++|++++ + |..++++|..+        ...+..+.+.++
T Consensus         2 ~Kli~~DlDGTL~~-~~~~i~~~~~~al~~l~-~-~~~~~i~TGR~--------~~~~~~~~~~~~   56 (267)
T d1nf2a_           2 YRVFVFDLDGTLLN-DNLEISEKDRRNIEKLS-R-KCYVVFASGRM--------LVSTLNVEKKYF   56 (267)
T ss_dssp             BCEEEEECCCCCSC-TTSCCCHHHHHHHHHHT-T-TSEEEEECSSC--------HHHHHHHHHHHS
T ss_pred             eEEEEEeCCccccC-CcCccCHHHHHHHHHHH-c-CCEEEEECCCC--------hHHHHHHHHHhc
Confidence            68999999999985 45567899999999987 4 44788888764        244555555544

>d2obba1 c.108.1.25 (A:1-122) Hypothetical protein BT0820 {Bacteroides thetaiotaomicron [TaxId: 818]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: BT0820-like
domain: Hypothetical protein BT0820
species: Bacteroides thetaiotaomicron [TaxId: 818]

Probab=95.46  E-value=0.0091  Score=48.15  Aligned_cols=91  Identities=13%  Similarity=0.112  Sum_probs=57.6

Q ss_pred             EEEEcCCceeecCC---CCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCeEEEcccCCCch
Q 017982          185 GVVFDKDNTLTAPY---SLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKVIRHRVKKPAG  261 (363)
Q Consensus       185 aVV~DlDnTL~~~~---~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~~I~~~~kKP~p  261 (363)
                      .+++|+||||+...   ...+.+++.+.|++|+ +.|+.|+|.|....     .........++..|+++......+|..
T Consensus         2 ti~vDiDGTl~~~~~~~~~kPi~~~Ie~l~~L~-~~G~~IIi~TaR~~-----~~~~~t~~wL~~~~i~yd~i~~~~~~~   75 (122)
T d2obba1           2 TIAVDFDGTIVEHRYPRIGEEIPFAVETLKLLQ-QEKHRLILWSVREG-----ELLDEAIEWCRARGLEFYAANKDYPEE   75 (122)
T ss_dssp             EEEECCBTTTBCSCTTSCCCBCTTHHHHHHHHH-HTTCEEEECCSCCH-----HHHHHHHHHHHTTTCCCSEESSSSTTC
T ss_pred             EEEEEcCCCcCCCCCCccccccHHHHHHHHHHH-HCCCeEEEEecCCC-----cchHHHHHHHHHcCCCceehhccCccC
Confidence            47899999997521   2356889999999998 57999999997752     112344566777788863222344443


Q ss_pred             h-HHHHHHHhCCCCCcEEEEccCC
Q 017982          262 T-AEEIEKHFGCQSSQLIMVGDRP  284 (363)
Q Consensus       262 ~-~~~alk~lgl~pee~vmVGDrL  284 (363)
                      . +.+   ...-+|.--++|-|+-
T Consensus        76 ~~~~~---~~~~Kp~ad~yIDDKa   96 (122)
T d2obba1          76 ERDHQ---GFSRKLKADLFIDDRN   96 (122)
T ss_dssp             ---CC---SCCSSCCCSEEECTTS
T ss_pred             ccccc---eecCCccccEEEeCCc
Confidence            2 111   1122555567887754

>d1ta0a_ c.108.1.16 (A:) Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, NRAMP1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NLI interacting factor-like phosphatase
domain: Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, NRAMP1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.27  E-value=0.0025  Score=54.35  Aligned_cols=127  Identities=12%  Similarity=0.053  Sum_probs=78.4

Q ss_pred             HcCCCEEEEcCCceeecCC-----C-----------------CCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccH
Q 017982          180 RRGFKGVVFDKDNTLTAPY-----S-----------------LTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDA  237 (363)
Q Consensus       180 ~~GIkaVV~DlDnTL~~~~-----~-----------------~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~  237 (363)
                      ..+-..+|+|+|+||....     .                 ...-|++.++|+.+.+  .+.|+|.|.+.        .
T Consensus        12 ~~~k~~LVLDLDeTLihs~~~~~~~~~~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~~--~yei~I~Ta~~--------~   81 (181)
T d1ta0a_          12 DSDKICVVIDLDETLVHSSFKPVNNADFIIPVEIDGVVHQVYVLKRPHVDEFLQRMGE--LFECVLFTASL--------A   81 (181)
T ss_dssp             GTTSCEEEECCBTTTEEEESSCCTTCSEEEEEEETTEEEEEEEEECTTHHHHHHHHHH--HSEEEEECSSC--------H
T ss_pred             cCCCeEEEEeCCCCEEccccCCCCCccceeeecccceeeeeEEecCCCHHHHHHHHHh--ceEEEEEcCCc--------H
Confidence            3467899999999997410     0                 0147999999999985  46999999986        4


Q ss_pred             HHHHHHHHHhCCe--E--EE--cccCCCchhHHHHHHHhCCCCCcEEEEccCCcccHHHHH-HcCCeEEEEcCCCC-CCc
Q 017982          238 SKARKLEGKIGIK--V--IR--HRVKKPAGTAEEIEKHFGCQSSQLIMVGDRPFTDIVYGN-RNGFLTILTEPLSL-AEE  309 (363)
Q Consensus       238 ~~a~~i~~~LGi~--~--I~--~~~kKP~p~~~~alk~lgl~pee~vmVGDrL~TDI~~A~-raGi~TIlV~p~~~-~~e  309 (363)
                      ..|+.+++.++-.  +  ..  ..+..-...+.+-++.+|-+.+++++|-|+.  +....+ ..|   |.|.+... .++
T Consensus        82 ~YA~~il~~ldp~~~~~~~~~r~~c~~~~~~~~KdL~~l~~~l~~vvivDd~~--~~~~~~~~N~---I~I~~f~~~~~D  156 (181)
T d1ta0a_          82 KYADPVADLLDKWGAFRARLFRESCVFHRGNYVKDLSRLGRDLRRVLILDNSP--ASYVFHPDNA---VPVASWFDNMSD  156 (181)
T ss_dssp             HHHHHHHHHHCSSCCEEEEECGGGSEEETTEEECCGGGSCSCGGGEEEECSCG--GGGTTCGGGB---CCCCCCSSCTTC
T ss_pred             HHHHHHHHHhccCCceeEEEEeeeeeecCCcccccHhhcCCCHHHeEEEcCCh--hhhhcCccCe---eEecCcCCCCCc
Confidence            7788888888643  1  11  1111111112234556788889999998887  344332 233   45554432 223


Q ss_pred             hhHHHHHHHHHH
Q 017982          310 PFIVRQVRKLEV  321 (363)
Q Consensus       310 ~~~t~~~R~lE~  321 (363)
                      .--.++++.||.
T Consensus       157 ~eL~~l~~~L~~  168 (181)
T d1ta0a_         157 TELHDLLPFFEQ  168 (181)
T ss_dssp             CHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHH
Confidence            333345555554

>d2bdua1 c.108.1.21 (A:7-297) Cytosolic 5'-nucleotidase III {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Pyrimidine 5'-nucleotidase (UMPH-1)
domain: Cytosolic 5'-nucleotidase III
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.22  E-value=0.011  Score=54.32  Aligned_cols=87  Identities=14%  Similarity=0.138  Sum_probs=60.3

Q ss_pred             CCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCeE-----EE-----------cccCCCch-
Q 017982          199 SLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKV-----IR-----------HRVKKPAG-  261 (363)
Q Consensus       199 ~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~~-----I~-----------~~~kKP~p-  261 (363)
                      ...+.|++.++++.|+ +.|++++|+|.+-        +..++.+++.+|+++     +.           .+...|-. 
T Consensus       133 ~i~Lr~G~~e~~~~l~-~~~i~~~IvSgG~--------~~~ie~vl~~lg~~~~ni~I~sN~l~f~~~~~~~~~~~~~i~  203 (291)
T d2bdua1         133 DVMLKEGYENFFGKLQ-QHGIPVFIFSAGI--------GDVLEEVIRQAGVYHSNVKVVSNFMDFDENGVLKGFKGELIH  203 (291)
T ss_dssp             CCCBCBTHHHHHHHHH-HHTCCEEEEEEEE--------HHHHHHHHHHTTCCBTTEEEEEECEEECTTSBEEEECSSCCC
T ss_pred             CCCcccCHHHHHHHHH-HcCCeEEEEcCCh--------HHHHHHHHHHcCCCccCceEEeeEEEEeCCeeEeeccCCccc
Confidence            3457899999999998 5799999999984        478899999999863     22           11122211 


Q ss_pred             ------hHHHHHH--HhCCCCCcEEEEccCCcccHHHHHHcC
Q 017982          262 ------TAEEIEK--HFGCQSSQLIMVGDRPFTDIVYGNRNG  295 (363)
Q Consensus       262 ------~~~~alk--~lgl~pee~vmVGDrL~TDI~~A~raG  295 (363)
                            ...+...  ...-...++++|||++ +|+.+|..+.
T Consensus       204 ~~~K~~~~~~~~~~~~~~~~~~~vI~iGDs~-~Dl~Ma~g~~  244 (291)
T d2bdua1         204 VFNKHDGALKNTDYFSQLKDNSNIILLGDSQ-GDLRMADGVA  244 (291)
T ss_dssp             TTCHHHHHHTTHHHHHHTTTCCEEEEEESSS-GGGGTTTTCS
T ss_pred             cccCcchhhhhHHHHhccCCcCcEEEEeCCH-hHHHHHhCCc
Confidence                  1111112  2233678899999999 8999988543

>d1u02a_ c.108.1.15 (A:) Trehalose-6-phosphate phosphatase related protein {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Trehalose-phosphatase
domain: Trehalose-6-phosphate phosphatase related protein
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=94.29  E-value=0.015  Score=48.02  Aligned_cols=42  Identities=21%  Similarity=0.133  Sum_probs=33.0

Q ss_pred             EEEEcCCceeecCC----CCCcchhHHHHHHHHHHhCCCeEEEEeCCC
Q 017982          185 GVVFDKDNTLTAPY----SLTLWGPLSSSIEQCKSVFGHDIAVFSNSA  228 (363)
Q Consensus       185 aVV~DlDnTL~~~~----~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~  228 (363)
                      .++||+|+||+.+.    ...+.+.+.++|++|++  |..++|+|..+
T Consensus         2 Li~~DlDGTL~~~~~~~~~~~i~~~~~~~l~~l~~--~~~v~i~TGR~   47 (229)
T d1u02a_           2 LIFLDYDGTLVPIIMNPEESYADAGLLSLISDLKE--RFDTYIVTGRS   47 (229)
T ss_dssp             EEEEECBTTTBCCCSCGGGCCCCHHHHHHHHHHHH--HSEEEEECSSC
T ss_pred             EEEEEecCCCCCCCCChhhCCCCHHHHHHHHHHhh--CCCEEEEcCCC
Confidence            57899999998532    23578999999999974  45799998875

>d2fuea1 c.108.1.10 (A:13-256) Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Phosphomannomutase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.24  E-value=0.038  Score=45.49  Aligned_cols=42  Identities=21%  Similarity=0.238  Sum_probs=31.8

Q ss_pred             CEEE-EcCCceeecCCCCCcchhHHHHHHHHHHhCCCeEEEEeCCC
Q 017982          184 KGVV-FDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSA  228 (363)
Q Consensus       184 kaVV-~DlDnTL~~~~~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~  228 (363)
                      |.++ ||+|+||.. ....+.+++.++|++|+ +.| .++|+|...
T Consensus         1 k~i~lFDlDGTLl~-~~~~is~~~~~~i~~l~-~~g-~~~i~tgrr   43 (244)
T d2fuea1           1 RVLCLFDVDGTLTP-ARQKIDPEVAAFLQKLR-SRV-QIGVVGGSD   43 (244)
T ss_dssp             CEEEEEESBTTTBS-TTSCCCHHHHHHHHHHT-TTS-EEEEECSSC
T ss_pred             CEEEEEccccCccC-CCCcCCHHHHHHHHHHH-hCC-CEEEEecCC
Confidence            3445 699999986 45567899999999997 568 467777653

>d2ayxa1 c.23.1.1 (A:817-949) Sensor kinase protein RcsC, C-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: Sensor kinase protein RcsC, C-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=92.55  E-value=0.71  Score=36.21  Aligned_cols=115  Identities=11%  Similarity=0.079  Sum_probs=66.6

Q ss_pred             CCCEEEEcCCceeecCCCCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCeEEEcccCCCch
Q 017982          182 GFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKVIRHRVKKPAG  261 (363)
Q Consensus       182 GIkaVV~DlDnTL~~~~~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~~I~~~~kKP~p  261 (363)
                      +++++++|-|.+.            .+.+..+.+..|+.+..++|.          ..+..+......+.|.....=|..
T Consensus         8 ~~~ILiVDD~~~~------------~~~l~~~L~~~g~~v~~a~~g----------~ea~~~~~~~~~dlillD~~mP~~   65 (133)
T d2ayxa1           8 DMMILVVDDHPIN------------RRLLADQLGSLGYQCKTANDG----------VDALNVLSKNHIDIVLSDVNMPNM   65 (133)
T ss_dssp             CCEEEEEESSHHH------------HHHHHHHHHHHTSEEEEECCS----------HHHHHHHHHSCCSEEEEEESSCSS
T ss_pred             CCEEEEEECCHHH------------HHHHHHHHHHcCCEEEEECcH----------HHHHHHHhccCceEEEEeccCCCC
Confidence            5677777755444            234555544679987776666          344455555555555433333443


Q ss_pred             -hH--HHHHHHhCCCCCcEEEEccCCcccHHHHHHcCCeEEEEcCCCCCCchhHHHHHHHHH
Q 017982          262 -TA--EEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGFLTILTEPLSLAEEPFIVRQVRKLE  320 (363)
Q Consensus       262 -~~--~~alk~lgl~pee~vmVGDrL~TDI~~A~raGi~TIlV~p~~~~~e~~~t~~~R~lE  320 (363)
                       ++  -+.++..+....=+++.|..-..|...|.++|+..++++|.. . +.+...+.+.++
T Consensus        66 dG~el~~~ir~~~~~~pii~lt~~~~~~~~~~~~~~G~~~~l~KP~~-~-~~L~~~l~~~~~  125 (133)
T d2ayxa1          66 DGYRLTQRIRQLGLTLPVIGVTANALAEEKQRCLESGMDSCLSKPVT-L-DVIKQTLTLYAE  125 (133)
T ss_dssp             CCHHHHHHHHHHHCCSCEEEEESSTTSHHHHHHHHCCCEEEEESSCC-H-HHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHhCCCCCEEEEeccCCHHHHHHHHHcCCCEEEECCCC-H-HHHHHHHHHHHH
Confidence             33  233344443333334446555578899999999999999986 3 334444444444

>d1kgsa2 c.23.1.1 (A:2-123) PhoB receiver domain {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: PhoB receiver domain
species: Thermotoga maritima [TaxId: 2336]

Probab=91.65  E-value=0.6  Score=36.00  Aligned_cols=102  Identities=13%  Similarity=0.111  Sum_probs=60.5

Q ss_pred             CCCEEEEcCCceeecCCCCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCeEEEcccCCCch
Q 017982          182 GFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKVIRHRVKKPAG  261 (363)
Q Consensus       182 GIkaVV~DlDnTL~~~~~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~~I~~~~kKP~p  261 (363)
                      ++|++++|-|.++.            +.+....+..|+.+..++|.          ..+...++....+.|.....=|..
T Consensus         1 nirILiVdDd~~~~------------~~l~~~L~~~g~~v~~a~~~----------~~al~~l~~~~~dlillD~~mp~~   58 (122)
T d1kgsa2           1 NVRVLVVEDERDLA------------DLITEALKKEMFTVDVCYDG----------EEGMYMALNEPFDVVILDIMLPVH   58 (122)
T ss_dssp             CCEEEEECSSHHHH------------HHHHHHHHHTTCEEEEESSH----------HHHHHHHHHSCCSEEEEESCCSSS
T ss_pred             CCEEEEEeCCHHHH------------HHHHHHHHHCCCEEEEEcch----------HHHHHHHHhhCccccccccccccc
Confidence            36777777555543            34554444679998887776          344444445455544433444554


Q ss_pred             -hH--HHHHHHhCCCCCcEEEEccCCcccHHHHHHcCCeEEEEcCCC
Q 017982          262 -TA--EEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGFLTILTEPLS  305 (363)
Q Consensus       262 -~~--~~alk~lgl~pee~vmVGDrL~TDI~~A~raGi~TIlV~p~~  305 (363)
                       ++  ...++..+...-=+++-|..-..+..-|.++|+...+++|..
T Consensus        59 ~g~~~~~~lr~~~~~~piI~lt~~~~~~~~~~~~~~Ga~~yl~KP~~  105 (122)
T d1kgsa2          59 DGWEILKSMRESGVNTPVLMLTALSDVEYRVKGLNMGADDYLPKPFD  105 (122)
T ss_dssp             CHHHHHHHHHHTTCCCCEEEEESSCHHHHHHHTCCCCCSEEEESSCC
T ss_pred             hhHHHHHHHHhcCCCCcEEEEcCCCCHHHHHHHHHcCCceeecCCCC
Confidence             33  233444443333344555554567788889999999999986

>d1dbwa_ c.23.1.1 (A:) Transcriptional regulatory protein FixJ, receiver domain {Rhizobium meliloti [TaxId: 382]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: Transcriptional regulatory protein FixJ, receiver domain
species: Rhizobium meliloti [TaxId: 382]

Probab=90.27  E-value=0.86  Score=35.20  Aligned_cols=103  Identities=11%  Similarity=0.127  Sum_probs=60.3

Q ss_pred             HHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCeEEEcccCCCch-hH--HHHHHHhCCCCCcEEEEccC
Q 017982          207 SSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKVIRHRVKKPAG-TA--EEIEKHFGCQSSQLIMVGDR  283 (363)
Q Consensus       207 ~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~~I~~~~kKP~p-~~--~~alk~lgl~pee~vmVGDr  283 (363)
                      .+.+..+.+..|+.+..++|.          ..+....+....+.+.....=|.. ++  .+.++..+-+..=+++-|..
T Consensus        16 ~~~l~~~L~~~g~~v~~a~~~----------~~al~~~~~~~~dlvi~D~~mp~~~G~e~~~~lr~~~~~~~iI~lt~~~   85 (123)
T d1dbwa_          16 RKSLAFMLTMNGFAVKMHQSA----------EAFLAFAPDVRNGVLVTDLRMPDMSGVELLRNLGDLKINIPSIVITGHG   85 (123)
T ss_dssp             HHHHHHHHHHTTCEEEEESCH----------HHHHHHGGGCCSEEEEEECCSTTSCHHHHHHHHHHTTCCCCEEEEECTT
T ss_pred             HHHHHHHHHHCCCEEEEECCH----------HHHHHHHhhcCCcEEEEeccCccccchHHHHHHHhcCCCCeEEEEEeeC
Confidence            445655545679987766554          444455555555554433444554 33  23344444444445566665


Q ss_pred             CcccHHHHHHcCCeEEEEcCCCCCCchhHHHHHHHHHH
Q 017982          284 PFTDIVYGNRNGFLTILTEPLSLAEEPFIVRQVRKLEV  321 (363)
Q Consensus       284 L~TDI~~A~raGi~TIlV~p~~~~~e~~~t~~~R~lE~  321 (363)
                      -..+...|.++|+...+.+|.. . +.+...+.|.+|+
T Consensus        86 ~~~~~~~a~~~Ga~~yl~KP~~-~-~~L~~~i~~a~e~  121 (123)
T d1dbwa_          86 DVPMAVEAMKAGAVDFIEKPFE-D-TVIIEAIERASEH  121 (123)
T ss_dssp             CHHHHHHHHHTTCSEEEESSCC-H-HHHHHHHHHHHTT
T ss_pred             CHHHHHHHHHCCCCEEEECCCC-H-HHHHHHHHHHHHh
Confidence            5567778899999999999986 2 4444455555543

>d2b30a1 c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmodium vivax [TaxId: 5855]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: PFL1270w orthologue
species: Plasmodium vivax [TaxId: 5855]

Probab=88.07  E-value=0.63  Score=39.17  Aligned_cols=38  Identities=21%  Similarity=0.371  Sum_probs=32.7

Q ss_pred             hHHHHHHHhCCCCCcEEEEccCCcccHHHHHHcCCeEEEE
Q 017982          262 TAEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGFLTILT  301 (363)
Q Consensus       262 ~~~~alk~lgl~pee~vmVGDrL~TDI~~A~raGi~TIlV  301 (363)
                      ++..+++.++++++++++|||+. +|+.+-..+|. ++.|
T Consensus       211 ~l~~l~~~~~i~~~~vi~~GD~~-ND~~Ml~~a~~-~va~  248 (283)
T d2b30a1         211 GINYLLKHYNISNDQVLVVGDAE-NDIAMLSNFKY-SFAV  248 (283)
T ss_dssp             HHHHHHHHTTCCGGGEEEEECSG-GGHHHHHSCSE-EEEC
T ss_pred             HHHHHhhhcccccceEEEecCCh-hhHHHHHhCCc-EEEe
Confidence            46788999999999999999998 89999999985 3443

>d1zh2a1 c.23.1.1 (A:2-120) Transcriptional regulatory protein KdpE, N-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: Transcriptional regulatory protein KdpE, N-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=87.86  E-value=3.7  Score=31.08  Aligned_cols=90  Identities=10%  Similarity=0.083  Sum_probs=55.4

Q ss_pred             hHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCeEEEcccCCCch-hHH--HHHHHhCCCCCcEEEEc
Q 017982          205 PLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKVIRHRVKKPAG-TAE--EIEKHFGCQSSQLIMVG  281 (363)
Q Consensus       205 ~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~~I~~~~kKP~p-~~~--~alk~lgl~pee~vmVG  281 (363)
                      ...+.+....+..|+.+..++|.          ..+-..++....+.|.....=|.. +++  +.++...-. -=+++.|
T Consensus        11 ~~~~~l~~~L~~~g~~v~~a~~~----------~eal~~l~~~~~dliilD~~mP~~~G~e~~~~ir~~~~~-piI~lt~   79 (119)
T d1zh2a1          11 AIRRFLRTALEGDGMRVFEAETL----------QRGLLEAATRKPDLIILDLGLPDGDGIEFIRDLRQWSAV-PVIVLSA   79 (119)
T ss_dssp             HHHHHHHHHHHTTTCEEEEESSH----------HHHHHHHHHHCCSEEEEESEETTEEHHHHHHHHHTTCCC-CEEEEES
T ss_pred             HHHHHHHHHHHHCCCEEEEeCCH----------HHHHHHHHhcCCCEEEeccccCCCCCchHHHHHHhccCC-cEEEEec
Confidence            34455655555689998877766          344445555566655433333554 332  233332222 2455667


Q ss_pred             cCCcccHHHHHHcCCeEEEEcCCC
Q 017982          282 DRPFTDIVYGNRNGFLTILTEPLS  305 (363)
Q Consensus       282 DrL~TDI~~A~raGi~TIlV~p~~  305 (363)
                      ..-..+...|.++|+...+++|..
T Consensus        80 ~~~~~~~~~a~~~Ga~dyl~KP~~  103 (119)
T d1zh2a1          80 RSEESDKIAALDAGADDYLSKPFG  103 (119)
T ss_dssp             CCSHHHHHHHHHHTCSEEEESSCC
T ss_pred             cCCHHHHHHHHHcCCCEEEECCCC
Confidence            777778889999999999999986

>d2pl1a1 c.23.1.1 (A:1-119) PhoP receiver domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: PhoP receiver domain
species: Escherichia coli [TaxId: 562]

Probab=87.84  E-value=3.3  Score=31.45  Aligned_cols=89  Identities=11%  Similarity=0.056  Sum_probs=54.0

Q ss_pred             HHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCeEEEcccCCCch-hHH--HHHHHhCCCCCcEEEEccC
Q 017982          207 SSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKVIRHRVKKPAG-TAE--EIEKHFGCQSSQLIMVGDR  283 (363)
Q Consensus       207 ~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~~I~~~~kKP~p-~~~--~alk~lgl~pee~vmVGDr  283 (363)
                      .+.+....+..|+.+..++|.          ..+...++....+.+.....=|.. +++  +.++..+-..-=+++-|..
T Consensus        13 ~~~l~~~L~~~G~~v~~a~~g----------~eal~~l~~~~~dliilD~~mP~~~G~e~~~~i~~~~~~~pvi~lt~~~   82 (119)
T d2pl1a1          13 RHHLKVQIQDAGHQVDDAEDA----------KEADYYLNEHIPDIAIVDLGLPDEDGLSLIRRWRSNDVSLPILVLTARE   82 (119)
T ss_dssp             HHHHHHHHHHTTCEEEEESSH----------HHHHHHHHHSCCSEEEECSCCSSSCHHHHHHHHHHTTCCSCEEEEESCC
T ss_pred             HHHHHHHHHHCCCEEEEECCH----------HHHHHHHHhcccceeehhccCCCchhHHHHHHHHhcCcccceEeeeccC
Confidence            345555444679987766665          445555555454544433444554 432  2223333333345566666


Q ss_pred             CcccHHHHHHcCCeEEEEcCCC
Q 017982          284 PFTDIVYGNRNGFLTILTEPLS  305 (363)
Q Consensus       284 L~TDI~~A~raGi~TIlV~p~~  305 (363)
                      -..|..-|.++|+...+.+|..
T Consensus        83 ~~~~~~~a~~~Ga~~yl~KP~~  104 (119)
T d2pl1a1          83 SWQDKVEVLSAGADDYVTKPFH  104 (119)
T ss_dssp             CHHHHHHHHHTTCSEEEESSCC
T ss_pred             CHHHHHHHHHcCCCEEEECCCC
Confidence            6667888999999999999986

>d2a9pa1 c.23.1.1 (A:2-118) DNA-binding response regulator MicA, N-terminal domain {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: DNA-binding response regulator MicA, N-terminal domain
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=87.24  E-value=4.5  Score=30.47  Aligned_cols=88  Identities=19%  Similarity=0.127  Sum_probs=52.8

Q ss_pred             HHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCeEEEcccCCCch-hHHHHHHHhC-CCCCcEE-EEccC
Q 017982          207 SSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKVIRHRVKKPAG-TAEEIEKHFG-CQSSQLI-MVGDR  283 (363)
Q Consensus       207 ~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~~I~~~~kKP~p-~~~~alk~lg-l~pee~v-mVGDr  283 (363)
                      .+.+....+..|+.+..++|.          ..+-..++....+.|.....=|.. +++ +++.+. ...--++ +.|..
T Consensus        13 ~~~l~~~L~~~g~~v~~a~~~----------~eal~~~~~~~~dlillD~~mp~~~G~~-~~~~i~~~~~~pvI~lt~~~   81 (117)
T d2a9pa1          13 SDIIKFNMTKEGYEVVTAFNG----------REALEQFEAEQPDIIILDLMLPEIDGLE-VAKTIRKTSSVPILMLSAKD   81 (117)
T ss_dssp             HHHHHHHHHHTTCEEEEESSH----------HHHHHHHHHHCCSEEEECSSCSSSCHHH-HHHHHHTTCCCCEEEEESCC
T ss_pred             HHHHHHHHHHCCCEEEEECCH----------HHHHHHHHhcCCCEEEeccccCCCCccH-HHHHHHhCCCCCEEEEecCC
Confidence            345555444679998877766          344445555555655434444554 332 223221 2222344 55666


Q ss_pred             CcccHHHHHHcCCeEEEEcCCC
Q 017982          284 PFTDIVYGNRNGFLTILTEPLS  305 (363)
Q Consensus       284 L~TDI~~A~raGi~TIlV~p~~  305 (363)
                      -..+...|.++|+...+++|..
T Consensus        82 ~~~~~~~a~~~Ga~d~l~KP~~  103 (117)
T d2a9pa1          82 SEFDKVIGLELGADDYVTKPFS  103 (117)
T ss_dssp             SHHHHHHHHHHTCSEEEESSCC
T ss_pred             CHHHHHHHHHcCCCEEEECCCC
Confidence            6667888999999999999986

>d1ys7a2 c.23.1.1 (A:7-127) Transcriptional regulatory protein PrrA, N-terminal domain {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: Transcriptional regulatory protein PrrA, N-terminal domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=86.64  E-value=3  Score=31.82  Aligned_cols=89  Identities=15%  Similarity=0.149  Sum_probs=54.2

Q ss_pred             HHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCeEEEcccCCCch-hH--HHHHHHhCCCCCcEEEEccC
Q 017982          207 SSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKVIRHRVKKPAG-TA--EEIEKHFGCQSSQLIMVGDR  283 (363)
Q Consensus       207 ~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~~I~~~~kKP~p-~~--~~alk~lgl~pee~vmVGDr  283 (363)
                      .+.+....+..|+.+..++|.          ..+...++....+.+.....=|.. ++  -+.++..+-..-=+++.|..
T Consensus        14 ~~~l~~~L~~~g~~v~~a~~~----------~eal~~~~~~~~dlvl~D~~mP~~~G~el~~~ir~~~~~~piI~lt~~~   83 (121)
T d1ys7a2          14 LASLERGLRLSGFEVATAVDG----------AEALRSATENRPDAIVLDINMPVLDGVSVVTALRAMDNDVPVCVLSARS   83 (121)
T ss_dssp             HHHHHHHHHHTTCEEEEESSH----------HHHHHHHHHSCCSEEEEESSCSSSCHHHHHHHHHHTTCCCCEEEEECCC
T ss_pred             HHHHHHHHHHCCCEEEEECCH----------HHHHHHHHhCCCCEEEEEeeccCcccHHHHHHHHhcCCCCEEEEEEeeC
Confidence            345555444679998877766          344444555455554433334554 33  23334444333335566666


Q ss_pred             CcccHHHHHHcCCeEEEEcCCC
Q 017982          284 PFTDIVYGNRNGFLTILTEPLS  305 (363)
Q Consensus       284 L~TDI~~A~raGi~TIlV~p~~  305 (363)
                      -..+...|.++|+...+++|..
T Consensus        84 ~~~~~~~a~~~Ga~dyl~KP~~  105 (121)
T d1ys7a2          84 SVDDRVAGLEAGADDYLVKPFV  105 (121)
T ss_dssp             TTTCCCTTTTTTCSEEEESSCC
T ss_pred             CHHHHHHHHHCCCCEEEECCCC
Confidence            6677889999999999999976

>d1mvoa_ c.23.1.1 (A:) PhoP receiver domain {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: PhoP receiver domain
species: Bacillus subtilis [TaxId: 1423]

Probab=86.63  E-value=5.1  Score=30.17  Aligned_cols=89  Identities=19%  Similarity=0.103  Sum_probs=55.3

Q ss_pred             HHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCeEEEcccCCCch-hHH--HHHHHhCCCCCcEEEEccC
Q 017982          207 SSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKVIRHRVKKPAG-TAE--EIEKHFGCQSSQLIMVGDR  283 (363)
Q Consensus       207 ~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~~I~~~~kKP~p-~~~--~alk~lgl~pee~vmVGDr  283 (363)
                      .+.+....+..|+.+..++|.          ..+-..++....+.|.....=|.. +++  ..++..+-...=+++.|-.
T Consensus        15 ~~~l~~~L~~~g~~v~~a~~~----------~~al~~l~~~~~dlillD~~mp~~~G~~~~~~~r~~~~~~~ii~lt~~~   84 (121)
T d1mvoa_          15 VTLLQYNLERSGYDVITASDG----------EEALKKAETEKPDLIVLDVMLPKLDGIEVCKQLRQQKLMFPILMLTAKD   84 (121)
T ss_dssp             HHHHHHHHHHTTCEEEEESSH----------HHHHHHHHHHCCSEEEEESSCSSSCHHHHHHHHHHTTCCCCEEEEECTT
T ss_pred             HHHHHHHHHHCCCEEEEECCH----------HHHHHHHhcccccEEEecccccCCCCchhhhhhhccCCCCEEEEEEeeC
Confidence            445655555789998888776          344444455555555433444554 332  2233333333335566666


Q ss_pred             CcccHHHHHHcCCeEEEEcCCC
Q 017982          284 PFTDIVYGNRNGFLTILTEPLS  305 (363)
Q Consensus       284 L~TDI~~A~raGi~TIlV~p~~  305 (363)
                      -..+...|.++|+...+++|..
T Consensus        85 ~~~~~~~~~~~Ga~~yl~KP~~  106 (121)
T d1mvoa_          85 EEFDKVLGLELGADDYMTKPFS  106 (121)
T ss_dssp             CCCCHHHHHHTTCCEEEESSCC
T ss_pred             CHHHHHHHHHCCCCEEEECCCC
Confidence            6678889999999999999986

>d1ny5a1 c.23.1.1 (A:1-137) Transcriptional activator sigm54 (NtrC1), N-terminal domain {Aquifex aeolicus [TaxId: 63363]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: Transcriptional activator sigm54 (NtrC1), N-terminal domain
species: Aquifex aeolicus [TaxId: 63363]

Probab=86.46  E-value=5.1  Score=31.01  Aligned_cols=105  Identities=16%  Similarity=0.158  Sum_probs=60.6

Q ss_pred             HHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCeEEEcccCCCch-hH--HHHHHHhCCCCCcEEEEcc
Q 017982          206 LSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKVIRHRVKKPAG-TA--EEIEKHFGCQSSQLIMVGD  282 (363)
Q Consensus       206 v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~~I~~~~kKP~p-~~--~~alk~lgl~pee~vmVGD  282 (363)
                      +.+.+..+.+..|+.+..++|.          ..+...+.....+.|.....=|.. ++  ...++..+-+..=++|-|-
T Consensus        12 ~~~~l~~~L~~~g~~v~~a~~~----------~eAl~~l~~~~~dlvilD~~mp~~~G~e~~~~lr~~~~~~piI~lT~~   81 (137)
T d1ny5a1          12 FRGLLEEYLSMKGIKVESAERG----------KEAYKLLSEKHFNVVLLDLLLPDVNGLEILKWIKERSPETEVIVITGH   81 (137)
T ss_dssp             HHHHHHHHHHHHTCEEEEESSH----------HHHHHHHHHSCCSEEEEESBCSSSBHHHHHHHHHHHCTTSEEEEEEET
T ss_pred             HHHHHHHHHHHCCCEEEEECCH----------HHHHHHhhccccccchHHHhhhhhhHHHHHHHHHHhCCCCCEEEEECC
Confidence            3445665555679988776655          445555555555655433334444 33  2233333322222444454


Q ss_pred             CCcccHHHHHHcCCeEEEEcCCCCCCchhHHHHHHHHHHH
Q 017982          283 RPFTDIVYGNRNGFLTILTEPLSLAEEPFIVRQVRKLEVT  322 (363)
Q Consensus       283 rL~TDI~~A~raGi~TIlV~p~~~~~e~~~t~~~R~lE~~  322 (363)
                      .-..+...|.++|+.-.+++|.. . +-+..++.|.+++.
T Consensus        82 ~~~~~~~~a~~~Ga~dyl~KP~~-~-~~L~~~i~~~l~~~  119 (137)
T d1ny5a1          82 GTIKTAVEAMKMGAYDFLTKPCM-L-EEIELTINKAIEHR  119 (137)
T ss_dssp             TCHHHHHHHHTTTCCEEEEESCC-H-HHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHcCCCEEEeCCCC-H-HHHHHHHHHHHHHH
Confidence            44467888999999999999976 3 33555566666654

>d1u0sy_ c.23.1.1 (Y:) CheY protein {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: CheY protein
species: Thermotoga maritima [TaxId: 2336]

Probab=86.25  E-value=4.3  Score=30.68  Aligned_cols=102  Identities=9%  Similarity=0.117  Sum_probs=57.9

Q ss_pred             CCCEEEEcCCceeecCCCCCcchhHHHHHHHHHHhCCCeEE-EEeCCCCCCCCCccHHHHHHHHHHhCCeEEEcccCCCc
Q 017982          182 GFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIA-VFSNSAGLYEYDNDASKARKLEGKIGIKVIRHRVKKPA  260 (363)
Q Consensus       182 GIkaVV~DlDnTL~~~~~~~~~p~v~e~L~~Lk~~~Gikl~-IVSN~~g~~~~dp~~~~a~~i~~~LGi~~I~~~~kKP~  260 (363)
                      |-|++++|-|..+            .+.+..+.+..|+.+. .++|.          ..+....+....+.+.....=|.
T Consensus         1 GkrILivDD~~~~------------~~~l~~~L~~~g~~v~~~a~~~----------~~al~~~~~~~~dliilD~~mp~   58 (118)
T d1u0sy_           1 GKRVLIVDDAAFM------------RMMLKDIITKAGYEVAGEATNG----------REAVEKYKELKPDIVTMDITMPE   58 (118)
T ss_dssp             CCEEEEECSCHHH------------HHHHHHHHHHTTCEEEEEESSH----------HHHHHHHHHHCCSEEEEECSCGG
T ss_pred             CCEEEEEeCCHHH------------HHHHHHHHHHcCCceEEEECCH----------HHHHHHHHhccCCEEEEecCCCC
Confidence            5566666655444            2345544446798865 45554          34444445555555543344455


Q ss_pred             h-hH--HHHHHHhCCCCCcEEEEccCCcccHHHHHHcCCeEEEEcCCC
Q 017982          261 G-TA--EEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGFLTILTEPLS  305 (363)
Q Consensus       261 p-~~--~~alk~lgl~pee~vmVGDrL~TDI~~A~raGi~TIlV~p~~  305 (363)
                      . ++  ...++..+-...=+++-|-.-..++.-|.++|+...+++|..
T Consensus        59 ~~G~e~~~~ir~~~~~~pvi~ls~~~~~~~~~~a~~~Ga~~yl~KP~~  106 (118)
T d1u0sy_          59 MNGIDAIKEIMKIDPNAKIIVCSAMGQQAMVIEAIKAGAKDFIVKPFQ  106 (118)
T ss_dssp             GCHHHHHHHHHHHCTTCCEEEEECTTCHHHHHHHHHTTCCEEEESSCC
T ss_pred             CCHHHHHHHHHHhCCCCcEEEEEccCCHHHHHHHHHcCCCEEEECCCC
Confidence            4 33  223344443333344444444467888999999999999976

>d2rbka1 c.108.1.10 (A:2-261) Sugar-phosphate phosphatase BT4131 {Bacteroides thetaiotaomicron [TaxId: 818]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Sugar-phosphate phosphatase BT4131
species: Bacteroides thetaiotaomicron [TaxId: 818]

Probab=85.55  E-value=0.34  Score=41.23  Aligned_cols=39  Identities=23%  Similarity=0.360  Sum_probs=33.9

Q ss_pred             hHHHHHHHhCCCCCcEEEEccCCcccHHHHHHcCCeEEEEc
Q 017982          262 TAEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGFLTILTE  302 (363)
Q Consensus       262 ~~~~alk~lgl~pee~vmVGDrL~TDI~~A~raGi~TIlV~  302 (363)
                      +++.+++++|++++++++|||+. .|+.+-+.+|. ++.|.
T Consensus       190 al~~l~~~~~i~~~~~~a~GD~~-ND~~Ml~~a~~-svav~  228 (260)
T d2rbka1         190 GIDEIIRHFGIKLEETMSFGDGG-NDISMLRHAAI-GVAMG  228 (260)
T ss_dssp             HHHHHHHHHTCCGGGEEEEECSG-GGHHHHHHSSE-EEECT
T ss_pred             HHHHHHHhccccHhheeEecCCc-ccHHHHHhCCe-EEEeC
Confidence            35788999999999999999998 89999999997 55554

>d1yioa2 c.23.1.1 (A:3-130) Response regulatory protein StyR, N-terminal domain {Pseudomonas fluorescens [TaxId: 294]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: Response regulatory protein StyR, N-terminal domain
species: Pseudomonas fluorescens [TaxId: 294]

Probab=85.54  E-value=6.1  Score=30.02  Aligned_cols=103  Identities=11%  Similarity=0.122  Sum_probs=58.4

Q ss_pred             HHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCeEEEcccCCCch-hHH--HHHHHhCCCCCcEEEEccC
Q 017982          207 SSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKVIRHRVKKPAG-TAE--EIEKHFGCQSSQLIMVGDR  283 (363)
Q Consensus       207 ~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~~I~~~~kKP~p-~~~--~alk~lgl~pee~vmVGDr  283 (363)
                      .+.+..+.+..|+.+..++|.          ..+....+....+.|.....=|.. +++  +.++...-...=+++.|..
T Consensus        15 ~~~l~~~L~~~g~~v~~a~~~----------~~al~~~~~~~~dliilD~~mp~~~G~~~~~~i~~~~~~~~ii~lt~~~   84 (128)
T d1yioa2          15 REGLRNLLRSAGFEVETFDCA----------STFLEHRRPEQHGCLVLDMRMPGMSGIELQEQLTAISDGIPIVFITAHG   84 (128)
T ss_dssp             HHHHHHHHHTTTCEEEEESSH----------HHHHHHCCTTSCEEEEEESCCSSSCHHHHHHHHHHTTCCCCEEEEESCT
T ss_pred             HHHHHHHHHHcCCCccccccH----------HHHHHHHHhcCCCEeehhhhcccchhHHHHHHHHhhCCCCeEEEEEEEC
Confidence            345665555789987776654          334444444445554433334554 332  2333333333334445655


Q ss_pred             CcccHHHHHHcCCeEEEEcCCCCCCchhHHHHHHHHHH
Q 017982          284 PFTDIVYGNRNGFLTILTEPLSLAEEPFIVRQVRKLEV  321 (363)
Q Consensus       284 L~TDI~~A~raGi~TIlV~p~~~~~e~~~t~~~R~lE~  321 (363)
                      -..+..-|.++|+...+.+|...  +....++.+.+|+
T Consensus        85 ~~~~~~~a~~~Ga~dyl~KP~~~--~~L~~~i~~~l~~  120 (128)
T d1yioa2          85 DIPMTVRAMKAGAIEFLPKPFEE--QALLDAIEQGLQL  120 (128)
T ss_dssp             TSCCCHHHHHTTEEEEEESSCCH--HHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHCCCCEEEECCCCH--HHHHHHHHHHHHH
Confidence            55678889999999999999863  3344444455543

>d1q92a_ c.108.1.8 (A:) 5'(3')-deoxyribonucleotidase (dNT-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: 5'(3')-deoxyribonucleotidase (dNT-2)
domain: 5'(3')-deoxyribonucleotidase (dNT-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.00  E-value=1.6  Score=35.62  Aligned_cols=92  Identities=12%  Similarity=0.138  Sum_probs=54.6

Q ss_pred             CCCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCe----EEEcccCCCchhHHHHHHHhCCC
Q 017982          198 YSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK----VIRHRVKKPAGTAEEIEKHFGCQ  273 (363)
Q Consensus       198 ~~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~----~I~~~~kKP~p~~~~alk~lgl~  273 (363)
                      ....+.|++.+++++|++..++.+.|+|......+ .....+..-+.+.++-.    +++. ..|-           .+.
T Consensus        71 ~~L~p~~gA~e~l~~L~~~~~~~v~i~t~~~~~~~-~~~~~k~~Wl~~~~~~~~~~~~~~t-~~K~-----------~~~  137 (195)
T d1q92a_          71 FELEPLPGAVEAVKEMASLQNTDVFICTSPIKMFK-YCPYEKYAWVEKYFGPDFLEQIVLT-RDKT-----------VVS  137 (195)
T ss_dssp             TTCCBCTTHHHHHHHHHHSTTEEEEEEECCCSCCS-SHHHHHHHHHHHHHCGGGGGGEEEC-SCST-----------TSC
T ss_pred             hhCCcccCHHHHHHHHhhccCccceEEccccccCc-chHHHHHHHHHHhcCCCCccEEEEc-cccc-----------eec
Confidence            34567899999999998433446888888753211 00112223345554422    3331 1221           111


Q ss_pred             CCcEEEEccCCcccHHHHHHcCCeEEEEc-CCC
Q 017982          274 SSQLIMVGDRPFTDIVYGNRNGFLTILTE-PLS  305 (363)
Q Consensus       274 pee~vmVGDrL~TDI~~A~raGi~TIlV~-p~~  305 (363)
                      .  -++|-|+. .-+..+..+|+.+|+.. |.+
T Consensus       138 ~--d~lIDD~p-~n~~~~~~~g~~~il~~~~~N  167 (195)
T d1q92a_         138 A--DLLIDDRP-DITGAEPTPSWEHVLFTACHN  167 (195)
T ss_dssp             C--SEEEESCS-CCCCSCSSCSSEEEEECCTTT
T ss_pred             C--eEEecCcH-HHHHHHhcCCCeEEEECCCcc
Confidence            2  27999998 56888888999999996 444

>d1zgza1 c.23.1.1 (A:2-121) TorCAD operon transcriptional regulator TorD, N-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: TorCAD operon transcriptional regulator TorD, N-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=84.84  E-value=6.2  Score=29.54  Aligned_cols=88  Identities=15%  Similarity=0.231  Sum_probs=53.3

Q ss_pred             HHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCeEEEcccCCCch-hHHHHHHHh-CCCCCcEEE-EccC
Q 017982          207 SSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKVIRHRVKKPAG-TAEEIEKHF-GCQSSQLIM-VGDR  283 (363)
Q Consensus       207 ~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~~I~~~~kKP~p-~~~~alk~l-gl~pee~vm-VGDr  283 (363)
                      .+.+..+.+..|+.+..++|.          ..+..+++....+.+.....=|.. +++ +++.. ....--++| -|..
T Consensus        14 ~~~l~~~L~~~g~~v~~a~~~----------~~a~~~~~~~~~dliilD~~mp~~~g~~-~~~~~~~~~~~piI~lt~~~   82 (120)
T d1zgza1          14 QARLQSYFTQEGYTVSVTASG----------AGLREIMQNQSVDLILLDINLPDENGLM-LTRALRERSTVGIILVTGRS   82 (120)
T ss_dssp             HHHHHHHHHHTTCEEEEESSH----------HHHHHHHHHSCCSEEEEESCCSSSCHHH-HHHHHHTTCCCEEEEEESSC
T ss_pred             HHHHHHHHHHCCCEEEEECCH----------HHHHHHHHhcCCCEEeeehhhccchhHH-HHHHHhccCCCeEEEEEccC
Confidence            345555544689988777665          445555555555555433444554 332 33333 222233444 5555


Q ss_pred             CcccHHHHHHcCCeEEEEcCCC
Q 017982          284 PFTDIVYGNRNGFLTILTEPLS  305 (363)
Q Consensus       284 L~TDI~~A~raGi~TIlV~p~~  305 (363)
                      -..+...|..+|+...+++|..
T Consensus        83 ~~~~~~~a~~~Ga~dyl~KP~~  104 (120)
T d1zgza1          83 DRIDRIVGLEMGADDYVTKPLE  104 (120)
T ss_dssp             CHHHHHHHHHHTCSEEEESSCC
T ss_pred             CHHHHHHHHHCCCCEEEECCCC
Confidence            5567888999999999999986

>d2pjua1 c.92.3.1 (A:11-196) Propionate catabolism operon regulatory protein PrpR {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Chelatase-like
superfamily: PrpR receptor domain-like
family: PrpR receptor domain-like
domain: Propionate catabolism operon regulatory protein PrpR
species: Escherichia coli [TaxId: 562]

Probab=83.57  E-value=0.78  Score=38.87  Aligned_cols=85  Identities=9%  Similarity=0.095  Sum_probs=56.1

Q ss_pred             hHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCeEEEcccCCCchh--HHHHHHHhCCCCCcEEEEcc
Q 017982          205 PLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKVIRHRVKKPAGT--AEEIEKHFGCQSSQLIMVGD  282 (363)
Q Consensus       205 ~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~~I~~~~kKP~p~--~~~alk~lgl~pee~vmVGD  282 (363)
                      ++..+|..++ +.+-+++|++-..-       ...++.+.+.+|++........+...  .-+-++.-|+   + ++|||
T Consensus        82 Dil~al~~a~-~~~~kiavV~~~~~-------~~~~~~~~~ll~~~i~~~~~~~~~e~~~~v~~l~~~G~---~-vVVG~  149 (186)
T d2pjua1          82 DVLQFLAKAG-KLTSSIGVVTYQET-------IPALVAFQKTFNLRLDQRSYITEEDARGQINELKANGT---E-AVVGA  149 (186)
T ss_dssp             HHHHHHHHTT-CTTSCEEEEEESSC-------CHHHHHHHHHHTCCEEEEEESSHHHHHHHHHHHHHTTC---C-EEEES
T ss_pred             HHHHHHHHHH-HhCCCEEEEeCCcc-------chHHHHHHHHhCCceEEEEecCHHHHHHHHHHHHHCCC---C-EEECC
Confidence            5667777776 46779999987642       24567888888888543233444432  1223334454   3 56999


Q ss_pred             CCcccHHHHHHcCCeEEEEcC
Q 017982          283 RPFTDIVYGNRNGFLTILTEP  303 (363)
Q Consensus       283 rL~TDI~~A~raGi~TIlV~p  303 (363)
                      .+-  +..|.++|+.++++.+
T Consensus       150 ~~~--~~~A~~~Gl~~vli~S  168 (186)
T d2pjua1         150 GLI--TDLAEEAGMTGIFIYS  168 (186)
T ss_dssp             HHH--HHHHHHTTSEEEESSC
T ss_pred             hHH--HHHHHHcCCCEEEEeC
Confidence            973  6778999999998853

>d1krwa_ c.23.1.1 (A:) NTRC receiver domain {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: NTRC receiver domain
species: Salmonella typhimurium [TaxId: 90371]

Probab=83.31  E-value=2.6  Score=32.15  Aligned_cols=89  Identities=15%  Similarity=0.137  Sum_probs=52.4

Q ss_pred             HHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCeEEEcccCCCch-hH--HHHHHHhCCCCCcEEEEccC
Q 017982          207 SSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKVIRHRVKKPAG-TA--EEIEKHFGCQSSQLIMVGDR  283 (363)
Q Consensus       207 ~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~~I~~~~kKP~p-~~--~~alk~lgl~pee~vmVGDr  283 (363)
                      ...+..+.+..|+.+..++|.          ..+...++....+.|.....=|.. ++  .+.++..+-..-=+++-|..
T Consensus        16 ~~~l~~~L~~~g~~v~~a~~~----------~~a~~~l~~~~~dlii~D~~mp~~~G~el~~~l~~~~~~~piI~~t~~~   85 (123)
T d1krwa_          16 RWVLERALAGAGLTCTTFENG----------NEVLAALASKTPDVLLSDIRMPGMDGLALLKQIKQRHPMLPVIIMTAHS   85 (123)
T ss_dssp             HHHHHHHHHHTTCEEEEESSS----------HHHHHHHTTCCCSEEEECCSSSSSTTHHHHHHHHHHSSSCCEEESCCCS
T ss_pred             HHHHHHHHHHCCCEEEEeCCH----------HHHHHHHHhCCCCEEEehhhcCCchHHHHHHHHHHhCCCCeEEEEecCC
Confidence            345655555679998888777          334444444445555433444544 33  22333333222234445555


Q ss_pred             CcccHHHHHHcCCeEEEEcCCC
Q 017982          284 PFTDIVYGNRNGFLTILTEPLS  305 (363)
Q Consensus       284 L~TDI~~A~raGi~TIlV~p~~  305 (363)
                      -..+...|.++|+...+++|..
T Consensus        86 ~~~~~~~a~~~Ga~dyl~KP~~  107 (123)
T d1krwa_          86 DLDAAVSAYQQGAFDYLPKPFD  107 (123)
T ss_dssp             CHHHHHHHHHHTEEEECSSCCH
T ss_pred             CHHHHHHHHHcCCCeEEeCcCC
Confidence            5567888999999999999876

>d1xhfa1 c.23.1.1 (A:2-122) Aerobic respiration control protein ArcA, N-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: Aerobic respiration control protein ArcA, N-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=82.85  E-value=5.6  Score=30.10  Aligned_cols=88  Identities=11%  Similarity=0.186  Sum_probs=52.8

Q ss_pred             HHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCeEEEcccCCCch-hHH--HHHHHhCCCCCcEEEEccC
Q 017982          207 SSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKVIRHRVKKPAG-TAE--EIEKHFGCQSSQLIMVGDR  283 (363)
Q Consensus       207 ~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~~I~~~~kKP~p-~~~--~alk~lgl~pee~vmVGDr  283 (363)
                      .+.+....+..|+.+..++|.          ..+.........+.|.....=|.. +++  +.++... +.-=+++-|..
T Consensus        15 ~~~l~~~L~~~g~~v~~a~~~----------~~al~~l~~~~~dlii~D~~mp~~~G~~~~~~~r~~~-~~pii~lt~~~   83 (121)
T d1xhfa1          15 RNTLKSIFEAEGYDVFEATDG----------AEMHQILSEYDINLVIMDINLPGKNGLLLARELREQA-NVALMFLTGRD   83 (121)
T ss_dssp             HHHHHHHHHTTTCEEEEESSH----------HHHHHHHHHSCCSEEEECSSCSSSCHHHHHHHHHHHC-CCEEEEEESCC
T ss_pred             HHHHHHHHHHCCCEEEEECCh----------HHHHHHHHhcCCCEEEeecccCCccCcHHHHHHHhcC-CCcEEEEECCC
Confidence            345555545689998877766          344444455555555433444443 332  2222222 12234556655


Q ss_pred             CcccHHHHHHcCCeEEEEcCCC
Q 017982          284 PFTDIVYGNRNGFLTILTEPLS  305 (363)
Q Consensus       284 L~TDI~~A~raGi~TIlV~p~~  305 (363)
                      -..+...|.++|+..++++|..
T Consensus        84 ~~~~~~~a~~~Ga~dyl~KP~~  105 (121)
T d1xhfa1          84 NEVDKILGLEIGADDYITKPFN  105 (121)
T ss_dssp             SHHHHHHHHHHTCSEEEESSCC
T ss_pred             CHHHHHHHHHcCCCEEEeCCCC
Confidence            5578889999999999999986

>d1peya_ c.23.1.1 (A:) Sporulation response regulator Spo0F {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: Sporulation response regulator Spo0F
species: Bacillus subtilis [TaxId: 1423]

Probab=82.80  E-value=6.7  Score=29.55  Aligned_cols=89  Identities=15%  Similarity=0.088  Sum_probs=52.9

Q ss_pred             HHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCeEEEcccCCCch-hH--HHHHHHhCCCCCcEEEE-c
Q 017982          206 LSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKVIRHRVKKPAG-TA--EEIEKHFGCQSSQLIMV-G  281 (363)
Q Consensus       206 v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~~I~~~~kKP~p-~~--~~alk~lgl~pee~vmV-G  281 (363)
                      +.+.+..+.+..|+.+..++|.          ..+....+....+.+.....=|.. ++  -+.++...-. -.++|+ |
T Consensus        13 ~~~~l~~~L~~~g~~v~~a~~g----------~eal~~~~~~~~dlillD~~mP~~~G~el~~~lr~~~~~-~pvi~lt~   81 (119)
T d1peya_          13 IRILLNEVFNKEGYQTFQAANG----------LQALDIVTKERPDLVLLDMKIPGMDGIEILKRMKVIDEN-IRVIIMTA   81 (119)
T ss_dssp             HHHHHHHHHHHTTCEEEEESSH----------HHHHHHHHHHCCSEEEEESCCTTCCHHHHHHHHHHHCTT-CEEEEEES
T ss_pred             HHHHHHHHHHHcCCEEEEeCCH----------HHHHHHHHhCCCCEEEEeccCCCCCHHHHHHHHHHhCCC-CcEEEEec
Confidence            3445666555689998877766          334444445455554433444554 33  2233333322 245554 5


Q ss_pred             cCCcccHHHHHHcCCeEEEEcCCC
Q 017982          282 DRPFTDIVYGNRNGFLTILTEPLS  305 (363)
Q Consensus       282 DrL~TDI~~A~raGi~TIlV~p~~  305 (363)
                      ..-..+...|.++|+...+.+|..
T Consensus        82 ~~~~~~~~~a~~~Ga~~yl~KP~~  105 (119)
T d1peya_          82 YGELDMIQESKELGALTHFAKPFD  105 (119)
T ss_dssp             SCCHHHHHHHHHTTCCEEEESSCC
T ss_pred             CCCHHHHHHHHHCCCCEEEECCCC
Confidence            444467888999999999999986

>d1dcfa_ c.23.1.2 (A:) Receiver domain of the ethylene receptor {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: Receiver domain of the ethylene receptor
domain: Receiver domain of the ethylene receptor
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=82.28  E-value=2.9  Score=32.42  Aligned_cols=101  Identities=19%  Similarity=0.224  Sum_probs=57.8

Q ss_pred             CCCEEEEcCCceeecCCCCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCeEEEcccCCCch
Q 017982          182 GFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKVIRHRVKKPAG  261 (363)
Q Consensus       182 GIkaVV~DlDnTL~~~~~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~~I~~~~kKP~p  261 (363)
                      |.+++|+|-|.+.            ...+..+.+..|+.+.+++|..         +..+.+.+  ..+.|.....=|..
T Consensus         7 g~rILvVDD~~~~------------~~~l~~~L~~~G~~v~~a~~g~---------eal~~l~~--~~dlillD~~mP~~   63 (134)
T d1dcfa_           7 GLKVLVMDENGVS------------RMVTKGLLVHLGCEVTTVSSNE---------ECLRVVSH--EHKVVFMDVCMPGV   63 (134)
T ss_dssp             TCEEEEECSCHHH------------HHHHHHHHHHTTCEEEEESSHH---------HHHHHCCT--TCSEEEEECCSSTT
T ss_pred             CCEEEEEeCCHHH------------HHHHHHHHHHCCCEEEEECCHH---------HHHHHhhc--CCCeEEEEeccCCC
Confidence            8888888754333            3345554446899888877762         22222222  23334333334543


Q ss_pred             -hH---HHHHHHhCC-CCCc--EE-EEccCCcccHHHHHHcCCeEEEEcCCC
Q 017982          262 -TA---EEIEKHFGC-QSSQ--LI-MVGDRPFTDIVYGNRNGFLTILTEPLS  305 (363)
Q Consensus       262 -~~---~~alk~lgl-~pee--~v-mVGDrL~TDI~~A~raGi~TIlV~p~~  305 (363)
                       ++   .++.+...- ....  ++ +-|.....+..-|.++|+..++.+|..
T Consensus        64 dG~el~~~ir~~~~~~~~~~~~ii~lT~~~~~~~~~~~~~~G~~~~l~KP~~  115 (134)
T d1dcfa_          64 ENYQIALRIHEKFTKQRHQRPLLVALSGNTDKSTKEKCMSFGLDGVLLKPVS  115 (134)
T ss_dssp             TTTHHHHHHHHHHC-CCSCCCEEEEEESCCSHHHHHHHHHTTCCEEEESSCC
T ss_pred             chHHHHHHHHHhcccccCCCCeEEEEeCCCCHHHHHHHHHcCCCEEEECCCC
Confidence             32   333333322 1222  33 446666678999999999999999986

>d1nf2a_ c.108.1.10 (A:) Hypothetical protein TM0651 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Hypothetical protein TM0651
species: Thermotoga maritima [TaxId: 2336]

Probab=81.84  E-value=0.38  Score=41.07  Aligned_cols=39  Identities=13%  Similarity=0.353  Sum_probs=33.5

Q ss_pred             hHHHHHHHhCCCCCcEEEEccCCcccHHHHHHcCCeEEEEc
Q 017982          262 TAEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGFLTILTE  302 (363)
Q Consensus       262 ~~~~alk~lgl~pee~vmVGDrL~TDI~~A~raGi~TIlV~  302 (363)
                      +++.+++++|++++++++|||+. .|+.+-..+|. +|.|.
T Consensus       194 ai~~l~~~~~i~~~~vva~GD~~-ND~~ml~~~~~-sva~~  232 (267)
T d1nf2a_         194 ALRFLRERMNWKKEEIVVFGDNE-NDLFMFEEAGL-RVAME  232 (267)
T ss_dssp             HHHHHHHHHTCCGGGEEEEECSH-HHHHHHTTCSE-EEECT
T ss_pred             HHHHHHHhhccCcccEEEEcCCc-chHHHHHhCCc-EEEeC
Confidence            46889999999999999999998 89999999985 45543

>d1mb3a_ c.23.1.1 (A:) Cell division response regulator DivK {Caulobacter crescentus [TaxId: 155892]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: Cell division response regulator DivK
species: Caulobacter crescentus [TaxId: 155892]

Probab=81.29  E-value=5.2  Score=30.16  Aligned_cols=89  Identities=11%  Similarity=0.004  Sum_probs=48.5

Q ss_pred             HHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCeEEEcccCCCch-hHH--HHHHHhCCCCC-cEEE-Ec
Q 017982          207 SSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKVIRHRVKKPAG-TAE--EIEKHFGCQSS-QLIM-VG  281 (363)
Q Consensus       207 ~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~~I~~~~kKP~p-~~~--~alk~lgl~pe-e~vm-VG  281 (363)
                      .+.+..+.+..|+.+..++|.          ..+-..++....+.|.....=|.. +++  +.++.....+. -+++ .|
T Consensus        14 ~~~l~~~L~~~g~~v~~a~~~----------~~al~~~~~~~~dlil~D~~mp~~dG~el~~~ir~~~~~~~iPii~lt~   83 (123)
T d1mb3a_          14 MKLFHDLLEAQGYETLQTREG----------LSALSIARENKPDLILMDIQLPEISGLEVTKWLKEDDDLAHIPVVAVTA   83 (123)
T ss_dssp             HHHHHHHHHHTTCEEEEESCH----------HHHHHHHHHHCCSEEEEESBCSSSBHHHHHHHHHHSTTTTTSCEEEEC-
T ss_pred             HHHHHHHHHHCCCEEEEECCH----------HHHHHHHHhCCCCEEEEEeccCCCcHHHHHHHHHhCCCcCCCCeEEEEE
Confidence            345555555789998877666          334444445455555433334554 432  22333222122 3344 45


Q ss_pred             cCCcccHHHHHHcCCeEEEEcCCC
Q 017982          282 DRPFTDIVYGNRNGFLTILTEPLS  305 (363)
Q Consensus       282 DrL~TDI~~A~raGi~TIlV~p~~  305 (363)
                      ..-..|...+..+|+..++.+|..
T Consensus        84 ~~~~~~~~~~~~~G~~~~l~KP~~  107 (123)
T d1mb3a_          84 FAMKGDEERIREGGCEAYISKPIS  107 (123)
T ss_dssp             -----CHHHHHHHTCSEEECSSCC
T ss_pred             ecCHHHHHHHHHcCCCEEEECCCC
Confidence            555578899999999999999976

>d1qkka_ c.23.1.1 (A:) Transcriptional regulatory protein DctD, receiver domain {Sinorhizobium meliloti [TaxId: 382]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: Transcriptional regulatory protein DctD, receiver domain
species: Sinorhizobium meliloti [TaxId: 382]

Probab=80.66  E-value=8.2  Score=29.88  Aligned_cols=105  Identities=11%  Similarity=0.153  Sum_probs=59.8

Q ss_pred             HHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCeEEEcccCCCch-hH--HHHHHHhCCCCCcEEEEcc
Q 017982          206 LSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKVIRHRVKKPAG-TA--EEIEKHFGCQSSQLIMVGD  282 (363)
Q Consensus       206 v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~~I~~~~kKP~p-~~--~~alk~lgl~pee~vmVGD  282 (363)
                      +.+.+..+.+..|+.+..++|.          ..+...++....+.|.....=|.. ++  .+.++..+-+..=+++-|.
T Consensus        12 ~~~~l~~~L~~~g~~v~~~~~~----------~~al~~l~~~~~dlil~D~~mP~~~G~el~~~lr~~~~~~pvI~lT~~   81 (140)
T d1qkka_          12 LRKAMQQTLELAGFTVSSFASA----------TEALAGLSADFAGIVISDIRMPGMDGLALFRKILALDPDLPMILVTGH   81 (140)
T ss_dssp             HHHHHHHHHHHTTCEEEEESCH----------HHHHHTCCTTCCSEEEEESCCSSSCHHHHHHHHHHHCTTSCEEEEECG
T ss_pred             HHHHHHHHHHHCCCEEEEeCCh----------HHHHHHHhccCcchHHHhhccCCCCHHHHHHHHHHhCCCCcEEEEECC
Confidence            4456666555689988877655          334444444444555434445554 33  2333344433333444454


Q ss_pred             CCcccHHHHHHcCCeEEEEcCCCCCCchhHHHHHHHHHHH
Q 017982          283 RPFTDIVYGNRNGFLTILTEPLSLAEEPFIVRQVRKLEVT  322 (363)
Q Consensus       283 rL~TDI~~A~raGi~TIlV~p~~~~~e~~~t~~~R~lE~~  322 (363)
                      .-..++.-|.++|+.-.+++|...  +.+..++.+.+|+.
T Consensus        82 ~~~~~~~~a~~~Ga~dyl~KP~~~--~~L~~~i~~~~~~~  119 (140)
T d1qkka_          82 GDIPMAVQAIQDGAYDFIAKPFAA--DRLVQSARRAEEKR  119 (140)
T ss_dssp             GGHHHHHHHHHTTCCEEEESSCCH--HHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHcCCCEeecCCCCH--HHHHHHHHHHHHHH
Confidence            444667778899999999999763  33445555555543